chrom chromStart chromEnd name geneNames ensemblIds hES_HUES1_p28.RRBS.methRatio hES_HUES1_p28.RRBS.cpgTotal hES_HUES1_p28.RRBS.cpgMinCoverage5 hES_HUES3_p27.RRBS.methRatio hES_HUES3_p27.RRBS.cpgTotal hES_HUES3_p27.RRBS.cpgMinCoverage5 hES_HUES6_p25.RRBS.methRatio hES_HUES6_p25.RRBS.cpgTotal hES_HUES6_p25.RRBS.cpgMinCoverage5 hES_HUES8_p30.RRBS.methRatio hES_HUES8_p30.RRBS.cpgTotal hES_HUES8_p30.RRBS.cpgMinCoverage5 hES_HUES9_p21.RRBS.methRatio hES_HUES9_p21.RRBS.cpgTotal hES_HUES9_p21.RRBS.cpgMinCoverage5 hES_HUES13_p47.RRBS.methRatio hES_HUES13_p47.RRBS.cpgTotal hES_HUES13_p47.RRBS.cpgMinCoverage5 hES_HUES28_p17.RRBS.methRatio hES_HUES28_p17.RRBS.cpgTotal hES_HUES28_p17.RRBS.cpgMinCoverage5 hES_HUES44_p18.RRBS.methRatio hES_HUES44_p18.RRBS.cpgTotal hES_HUES44_p18.RRBS.cpgMinCoverage5 hES_HUES45_p20.RRBS.methRatio hES_HUES45_p20.RRBS.cpgTotal hES_HUES45_p20.RRBS.cpgMinCoverage5 hES_HUES48_p19.RRBS.methRatio hES_HUES48_p19.RRBS.cpgTotal hES_HUES48_p19.RRBS.cpgMinCoverage5 hES_HUES49_p17.RRBS.methRatio hES_HUES49_p17.RRBS.cpgTotal hES_HUES49_p17.RRBS.cpgMinCoverage5 hES_HUES53_p17.RRBS.methRatio hES_HUES53_p17.RRBS.cpgTotal hES_HUES53_p17.RRBS.cpgMinCoverage5 hES_HUES62_p14.RRBS.methRatio hES_HUES62_p14.RRBS.cpgTotal hES_HUES62_p14.RRBS.cpgMinCoverage5 hES_HUES63_p19.RRBS.methRatio hES_HUES63_p19.RRBS.cpgTotal hES_HUES63_p19.RRBS.cpgMinCoverage5 hES_HUES64_p19.RRBS.methRatio hES_HUES64_p19.RRBS.cpgTotal hES_HUES64_p19.RRBS.cpgMinCoverage5 hES_HUES65_p19.RRBS.methRatio hES_HUES65_p19.RRBS.cpgTotal hES_HUES65_p19.RRBS.cpgMinCoverage5 hES_HUES66_p20.RRBS.methRatio hES_HUES66_p20.RRBS.cpgTotal hES_HUES66_p20.RRBS.cpgMinCoverage5 hES_H1_p37.RRBS.methRatio hES_H1_p37.RRBS.cpgTotal hES_H1_p37.RRBS.cpgMinCoverage5 hES_H7_p48.RRBS.methRatio hES_H7_p48.RRBS.cpgTotal hES_H7_p48.RRBS.cpgMinCoverage5 hES_H9_p58.RRBS.methRatio hES_H9_p58.RRBS.cpgTotal hES_H9_p58.RRBS.cpgMinCoverage5 hiPS_11a_p22.RRBS.methRatio hiPS_11a_p22.RRBS.cpgTotal hiPS_11a_p22.RRBS.cpgMinCoverage5 hiPS_11b_p13.RRBS.methRatio hiPS_11b_p13.RRBS.cpgTotal hiPS_11b_p13.RRBS.cpgMinCoverage5 hiPS_11c_p23.RRBS.methRatio hiPS_11c_p23.RRBS.cpgTotal hiPS_11c_p23.RRBS.cpgMinCoverage5 hiPS_15b_p27.RRBS.methRatio hiPS_15b_p27.RRBS.cpgTotal hiPS_15b_p27.RRBS.cpgMinCoverage5 hiPS_17a_p14.RRBS.methRatio hiPS_17a_p14.RRBS.cpgTotal hiPS_17a_p14.RRBS.cpgMinCoverage5 hiPS_17b_p32.RRBS.methRatio hiPS_17b_p32.RRBS.cpgTotal hiPS_17b_p32.RRBS.cpgMinCoverage5 hiPS_18a_p30.RRBS.methRatio hiPS_18a_p30.RRBS.cpgTotal hiPS_18a_p30.RRBS.cpgMinCoverage5 hiPS_18b_p27.RRBS.methRatio hiPS_18b_p27.RRBS.cpgTotal hiPS_18b_p27.RRBS.cpgMinCoverage5 hiPS_18c_p36.RRBS.methRatio hiPS_18c_p36.RRBS.cpgTotal hiPS_18c_p36.RRBS.cpgMinCoverage5 hiPS_20b_p43.RRBS.methRatio hiPS_20b_p43.RRBS.cpgTotal hiPS_20b_p43.RRBS.cpgMinCoverage5 hiPS_27b_p31.RRBS.methRatio hiPS_27b_p31.RRBS.cpgTotal hiPS_27b_p31.RRBS.cpgMinCoverage5 hiPS_27e_p32.RRBS.methRatio hiPS_27e_p32.RRBS.cpgTotal hiPS_27e_p32.RRBS.cpgMinCoverage5 hFib_11_p8.RRBS.methRatio hFib_11_p8.RRBS.cpgTotal hFib_11_p8.RRBS.cpgMinCoverage5 hFib_15_p7.RRBS.methRatio hFib_15_p7.RRBS.cpgTotal hFib_15_p7.RRBS.cpgMinCoverage5 hFib_17_p7.RRBS.methRatio hFib_17_p7.RRBS.cpgTotal hFib_17_p7.RRBS.cpgMinCoverage5 hFib_18_p7.RRBS.methRatio hFib_18_p7.RRBS.cpgTotal hFib_18_p7.RRBS.cpgMinCoverage5 hFib_20_p7.RRBS.methRatio hFib_20_p7.RRBS.cpgTotal hFib_20_p7.RRBS.cpgMinCoverage5 hFib_27_p7.RRBS.methRatio hFib_27_p7.RRBS.cpgTotal hFib_27_p7.RRBS.cpgMinCoverage5 hEB16d_HUES1_p29.RRBS.methRatio hEB16d_HUES1_p29.RRBS.cpgTotal hEB16d_HUES1_p29.RRBS.cpgMinCoverage5 hEB16d_HUES3_p22.RRBS.methRatio hEB16d_HUES3_p22.RRBS.cpgTotal hEB16d_HUES3_p22.RRBS.cpgMinCoverage5 hEB16d_HUES6_p30.RRBS.methRatio hEB16d_HUES6_p30.RRBS.cpgTotal hEB16d_HUES6_p30.RRBS.cpgMinCoverage5 hEB16d_HUES45_p21.RRBS.methRatio hEB16d_HUES45_p21.RRBS.cpgTotal hEB16d_HUES45_p21.RRBS.cpgMinCoverage5 hEB16d_H1_p38.RRBS.methRatio hEB16d_H1_p38.RRBS.cpgTotal hEB16d_H1_p38.RRBS.cpgMinCoverage5 shared_hES_HUES1_p28.RRBS shared_hES_HUES3_p27.RRBS shared_hES_HUES6_p25.RRBS shared_hES_HUES8_p30.RRBS shared_hES_HUES9_p21.RRBS shared_hES_HUES13_p47.RRBS shared_hES_HUES28_p17.RRBS shared_hES_HUES44_p18.RRBS shared_hES_HUES45_p20.RRBS shared_hES_HUES48_p19.RRBS shared_hES_HUES49_p17.RRBS shared_hES_HUES53_p17.RRBS shared_hES_HUES62_p14.RRBS shared_hES_HUES63_p19.RRBS shared_hES_HUES64_p19.RRBS shared_hES_HUES65_p19.RRBS shared_hES_HUES66_p20.RRBS shared_hES_H1_p37.RRBS shared_hES_H7_p48.RRBS shared_hES_H9_p58.RRBS shared_hiPS_11a_p22.RRBS shared_hiPS_11b_p13.RRBS shared_hiPS_11c_p23.RRBS shared_hiPS_15b_p27.RRBS shared_hiPS_17a_p14.RRBS shared_hiPS_17b_p32.RRBS shared_hiPS_18a_p30.RRBS shared_hiPS_18b_p27.RRBS shared_hiPS_18c_p36.RRBS shared_hiPS_20b_p43.RRBS shared_hiPS_27b_p31.RRBS shared_hiPS_27e_p32.RRBS shared_hFib_11_p8.RRBS shared_hFib_15_p7.RRBS shared_hFib_17_p7.RRBS shared_hFib_18_p7.RRBS shared_hFib_20_p7.RRBS shared_hFib_27_p7.RRBS shared_hEB16d_HUES1_p29.RRBS shared_hEB16d_HUES3_p22.RRBS shared_hEB16d_HUES6_p30.RRBS shared_hEB16d_HUES45_p21.RRBS shared_hEB16d_H1_p38.RRBS shared_cpgMinCoverage5 sample1Methylation_weightedPos_-_hES_vs_hiPS sample2Methylation_weightedPos_-_hES_vs_hiPS methDiff_weightedPos_-_hES_vs_hiPS rrbsMinCoverage_-_hES_vs_hiPS sample1Methylation_unweightedPos_-_hES_vs_hiPS sample2Methylation_unweightedPos_-_hES_vs_hiPS methDiff_unweightedPos_-_hES_vs_hiPS pValueGreater.ttest_-_hES_vs_hiPS pValueLess.ttest_-_hES_vs_hiPS pvalClass_byPos.ttest_-_hES_vs_hiPS qValueGreater.ttest_-_hES_vs_hiPS qValueLess.ttest_-_hES_vs_hiPS qvalClass_byPos.ttest_-_hES_vs_hiPS pValueGreater.wilcoxon_-_hES_vs_hiPS pValueLess.wilcoxon_-_hES_vs_hiPS pvalClass_byPos.wilcoxon_-_hES_vs_hiPS qValueGreater.wilcoxon_-_hES_vs_hiPS qValueLess.wilcoxon_-_hES_vs_hiPS qvalClass_byPos.wilcoxon_-_hES_vs_hiPS methDiff_-_hES_vs_hiPS pValue_-_hES_vs_hiPS pvalClass_-_hES_vs_hiPS qValue_-_hES_vs_hiPS_pi1 qvalClass_-_hES_vs_hiPS sample1Methylation_weightedPos_-_hES_vs_hFib sample2Methylation_weightedPos_-_hES_vs_hFib methDiff_weightedPos_-_hES_vs_hFib rrbsMinCoverage_-_hES_vs_hFib sample1Methylation_unweightedPos_-_hES_vs_hFib sample2Methylation_unweightedPos_-_hES_vs_hFib methDiff_unweightedPos_-_hES_vs_hFib pValueGreater.ttest_-_hES_vs_hFib pValueLess.ttest_-_hES_vs_hFib pvalClass_byPos.ttest_-_hES_vs_hFib qValueGreater.ttest_-_hES_vs_hFib qValueLess.ttest_-_hES_vs_hFib qvalClass_byPos.ttest_-_hES_vs_hFib pValueGreater.wilcoxon_-_hES_vs_hFib pValueLess.wilcoxon_-_hES_vs_hFib pvalClass_byPos.wilcoxon_-_hES_vs_hFib qValueGreater.wilcoxon_-_hES_vs_hFib qValueLess.wilcoxon_-_hES_vs_hFib qvalClass_byPos.wilcoxon_-_hES_vs_hFib methDiff_-_hES_vs_hFib pValue_-_hES_vs_hFib pvalClass_-_hES_vs_hFib qValue_-_hES_vs_hFib_pi1 qvalClass_-_hES_vs_hFib sample1Methylation_weightedPos_-_hES_vs_hEB16d sample2Methylation_weightedPos_-_hES_vs_hEB16d methDiff_weightedPos_-_hES_vs_hEB16d rrbsMinCoverage_-_hES_vs_hEB16d sample1Methylation_unweightedPos_-_hES_vs_hEB16d sample2Methylation_unweightedPos_-_hES_vs_hEB16d methDiff_unweightedPos_-_hES_vs_hEB16d pValueGreater.ttest_-_hES_vs_hEB16d pValueLess.ttest_-_hES_vs_hEB16d pvalClass_byPos.ttest_-_hES_vs_hEB16d qValueGreater.ttest_-_hES_vs_hEB16d qValueLess.ttest_-_hES_vs_hEB16d qvalClass_byPos.ttest_-_hES_vs_hEB16d pValueGreater.wilcoxon_-_hES_vs_hEB16d pValueLess.wilcoxon_-_hES_vs_hEB16d pvalClass_byPos.wilcoxon_-_hES_vs_hEB16d qValueGreater.wilcoxon_-_hES_vs_hEB16d qValueLess.wilcoxon_-_hES_vs_hEB16d qvalClass_byPos.wilcoxon_-_hES_vs_hEB16d methDiff_-_hES_vs_hEB16d pValue_-_hES_vs_hEB16d pvalClass_-_hES_vs_hEB16d qValue_-_hES_vs_hEB16d_pi1 qvalClass_-_hES_vs_hEB16d sample1Methylation_weightedPos_-_hiPS_vs_hFib sample2Methylation_weightedPos_-_hiPS_vs_hFib methDiff_weightedPos_-_hiPS_vs_hFib rrbsMinCoverage_-_hiPS_vs_hFib sample1Methylation_unweightedPos_-_hiPS_vs_hFib sample2Methylation_unweightedPos_-_hiPS_vs_hFib methDiff_unweightedPos_-_hiPS_vs_hFib pValueGreater.ttest_-_hiPS_vs_hFib pValueLess.ttest_-_hiPS_vs_hFib pvalClass_byPos.ttest_-_hiPS_vs_hFib qValueGreater.ttest_-_hiPS_vs_hFib qValueLess.ttest_-_hiPS_vs_hFib qvalClass_byPos.ttest_-_hiPS_vs_hFib pValueGreater.wilcoxon_-_hiPS_vs_hFib pValueLess.wilcoxon_-_hiPS_vs_hFib pvalClass_byPos.wilcoxon_-_hiPS_vs_hFib qValueGreater.wilcoxon_-_hiPS_vs_hFib qValueLess.wilcoxon_-_hiPS_vs_hFib qvalClass_byPos.wilcoxon_-_hiPS_vs_hFib methDiff_-_hiPS_vs_hFib pValue_-_hiPS_vs_hFib pvalClass_-_hiPS_vs_hFib qValue_-_hiPS_vs_hFib_pi1 qvalClass_-_hiPS_vs_hFib sample1Methylation_weightedPos_-_hiPS_vs_hEB16d sample2Methylation_weightedPos_-_hiPS_vs_hEB16d methDiff_weightedPos_-_hiPS_vs_hEB16d rrbsMinCoverage_-_hiPS_vs_hEB16d sample1Methylation_unweightedPos_-_hiPS_vs_hEB16d sample2Methylation_unweightedPos_-_hiPS_vs_hEB16d methDiff_unweightedPos_-_hiPS_vs_hEB16d pValueGreater.ttest_-_hiPS_vs_hEB16d pValueLess.ttest_-_hiPS_vs_hEB16d pvalClass_byPos.ttest_-_hiPS_vs_hEB16d qValueGreater.ttest_-_hiPS_vs_hEB16d qValueLess.ttest_-_hiPS_vs_hEB16d qvalClass_byPos.ttest_-_hiPS_vs_hEB16d pValueGreater.wilcoxon_-_hiPS_vs_hEB16d pValueLess.wilcoxon_-_hiPS_vs_hEB16d pvalClass_byPos.wilcoxon_-_hiPS_vs_hEB16d qValueGreater.wilcoxon_-_hiPS_vs_hEB16d qValueLess.wilcoxon_-_hiPS_vs_hEB16d qvalClass_byPos.wilcoxon_-_hiPS_vs_hEB16d methDiff_-_hiPS_vs_hEB16d pValue_-_hiPS_vs_hEB16d pvalClass_-_hiPS_vs_hEB16d qValue_-_hiPS_vs_hEB16d_pi1 qvalClass_-_hiPS_vs_hEB16d sample1Methylation_weightedPos_-_hFib_vs_hEB16d sample2Methylation_weightedPos_-_hFib_vs_hEB16d methDiff_weightedPos_-_hFib_vs_hEB16d rrbsMinCoverage_-_hFib_vs_hEB16d sample1Methylation_unweightedPos_-_hFib_vs_hEB16d sample2Methylation_unweightedPos_-_hFib_vs_hEB16d methDiff_unweightedPos_-_hFib_vs_hEB16d pValueGreater.ttest_-_hFib_vs_hEB16d pValueLess.ttest_-_hFib_vs_hEB16d pvalClass_byPos.ttest_-_hFib_vs_hEB16d qValueGreater.ttest_-_hFib_vs_hEB16d qValueLess.ttest_-_hFib_vs_hEB16d qvalClass_byPos.ttest_-_hFib_vs_hEB16d pValueGreater.wilcoxon_-_hFib_vs_hEB16d pValueLess.wilcoxon_-_hFib_vs_hEB16d pvalClass_byPos.wilcoxon_-_hFib_vs_hEB16d qValueGreater.wilcoxon_-_hFib_vs_hEB16d qValueLess.wilcoxon_-_hFib_vs_hEB16d qvalClass_byPos.wilcoxon_-_hFib_vs_hEB16d methDiff_-_hFib_vs_hEB16d pValue_-_hFib_vs_hEB16d pvalClass_-_hFib_vs_hEB16d qValue_-_hFib_vs_hEB16d_pi1 qvalClass_-_hFib_vs_hEB16d chr1 997130 998130 15 ENSG00000217801 0.836646 1145 44 0.848454 1032 47 0.811657 998 49 0.9198035 1321 31 0.848217 714 48 0.8723403 1378 45 0.7793037 878 48 0.846520 829 44 0.839828 1095 49 0.904811 1045 48 0.8662589 1365 49 0.815584 789 44 0.849920 1596 51 0.850390 435 19 0.851175 871 46 0.830708 377 32 0.867078 362 28 0.8380060 1529 42 0.901962 1100 49 0.8808121 1141 47 0.814380 461 41 0.801810 599 33 0.849676 756 39 0.780496 485 36 0.8914893 382 24 0.8920877 1514 49 0.707452 750 38 0.7946304 474 34 0.833148 1130 43 0.865232 1474 45 0.881575 1275 48 0.857141 1502 49 0.6068973 1143 48 0.5938743 1003 46 0.4260472 523 22 0.7287749 405 31 0.6841801 707 40 0.7277213 1241 46 0.8915554 1064 44 0.923326 1479 47 0.8777555 406 29 0.8858881 1315 43 0.873348 1183 45 0.875788 0.838235 0.819677 0.9071316 0.8766443 0.861599 0.8250341 0.8435852 0.8153136 0.9098339 0.8880368 0.8206913 0.8489432 0.874527 0.8902324 0.81685390 0.859294 0.8410915 0.9000023 0.880729 0.835076 0.8236344 0.861430 0.8097916 0.905181 0.8821315 0.782324 0.8481776 0.842242 0.877439 0.870871 0.906589 0.5770286 0.5930419 0.5702922 0.7007541 0.7260529 0.7165899 0.8649180 0.898119 0.855379 0.8590461 0.901232 19 0.870200 0.871783 -0.00472045 47 0.854434 0.816708 0.03772563 0.6495087 0.36476888 insignificant 1 1.00000 insignificant 0.6939565 0.3884535 insignificant 1 1.00000 insignificant 0.02221396 0.2183274 insignificant 1 insignificant 0.870192 0.6413065 0.2180058 48 0.850773 0.646463 0.20431000 1.1828e-80 1.0000e+00 hypermethylated 2.3655e-78 1.0000e+00 hypermethylated 8.6884e-24 1.0000e+00 hypermethylated 4.3442e-21 1.0000e+00 hypermethylated 0.2250579 4.4816e-03 weaklyHypermeth 5.6729e-02 weaklyHypermeth 0.871425 0.8937030 -0.0229316 44 0.871013 0.889120 -0.01810783 9.9997e-01 5.4102e-10 weaklyHypometh 1.0000e+00 5.4102e-07 weaklyHypometh 9.9995e-01 4.5769e-08 weaklyHypometh 1.0000e+00 4.5769e-05 weaklyHypometh -0.0374007 8.2199e-03 weaklyHypometh 1.6117e-01 insignificant 0.872082 0.6413065 0.22054963 47 0.848410 0.646463 0.20194691 3.0793e-50 1.0000e+00 hypermethylated 4.3990e-48 1.0000e+00 hypermethylated 3.4863e-18 1.0000e+00 hypermethylated 1.7431e-15 1.0000e+00 hypermethylated 0.2028439 5.9518e-03 weaklyHypermeth 7.3322e-02 weaklyHypermeth 0.874037 0.8937030 -0.01725837 44 0.838505 0.889120 -5.0616e-02 9.9969e-01 2.5649e-05 weaklyHypometh 1.0000e+00 0.014186 weaklyHypometh 9.9886e-01 0.00090003 weaklyHypometh 1.0000e+00 0.60116 insignificant -0.05961468 4.7330e-03 weaklyHypometh 1.3147e-01 insignificant 0.6418178 0.8940118 -0.2511757 44 0.659392 0.904685 -2.4529e-01 1.0000e+00 1.4948e-35 hypomethylated 1.0000e+00 3.7370e-33 hypomethylated 1.0000e+00 1.1202e-18 hypomethylated 1.0000e+00 5.6008e-16 hypomethylated -0.2624586 2.1645e-03 weaklyHypometh 0.04689391 weaklyHypometh chr1 1576246 1577246 16 ENSG00000189229 0.823998 267 11 0.687482 345 11 0.589679 76 8 0.8519134 247 10 0.718498 61 8 0.7960761 422 11 0.5787485 67 7 0.736072 176 11 0.757110 63 8 0.646825 93 10 0.7348194 421 11 0.851852 21 0 0.839859 132 11 0.840509 90 9 0.863636 106 9 0.928571 13 0 0.916667 7 0 0.7235489 232 11 0.933330 373 8 0.8031724 346 11 0.738095 86 6 0.879672 71 7 0.774351 135 8 0.816883 93 11 0.7685020 77 8 0.7579473 407 11 0.855377 118 7 0.7142857 8 0 0.827753 274 8 0.785065 323 11 0.835538 350 11 0.737842 395 11 0.7045100 201 11 0.7464646 166 11 0.7723693 130 9 0.7800000 25 1 0.6685749 120 7 0.7664073 367 11 0.7592238 170 10 0.839666 338 11 0.8066136 160 10 0.8843823 158 10 0.765900 238 10 0.772380 0.638604 0.504596 0.7957229 0.6822090 0.739707 0.4870771 0.6624299 0.6250842 0.6054894 0.8051096 0.7307954 0.7997200 0.780993 0.8537037 0.81961018 0.822964 0.7088087 0.9117755 0.762717 0.849647 0.8570945 0.736276 0.7510141 0.782466 0.6977163 0.842192 0.8144883 0.761136 0.776249 0.778061 0.745519 0.6531049 0.6459877 0.7312735 0.7294600 0.5723041 0.6785530 0.8266028 0.785214 0.775046 0.8579772 0.792080 0 0.843689 0.862527 -0.01354632 11 0.748585 0.782466 -0.03388095 0.9174611 0.12271772 insignificant 1 1.00000 insignificant 0.9940970 0.1195000 insignificant 1 1.00000 insignificant -0.00982432 0.7250102 insignificant 1 insignificant 0.844032 0.7696127 0.0779235 11 0.759198 0.793213 -0.03401482 2.9473e-03 8.3029e-01 weaklyHypermeth 1.6651e-02 1.0000e+00 weaklyHypermeth 1.6227e-01 8.4867e-01 insignificant 8.0732e-01 1.0000e+00 insignificant 0.0413973 1.7471e-01 insignificant 9.7602e-01 insignificant 0.844332 0.8552632 -0.0274153 10 0.766316 0.742415 0.02390139 9.8020e-01 1.6353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6303e-01 1.5831e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0300388 3.7912e-01 insignificant 1.0000e+00 insignificant 0.861433 0.7680872 0.09018246 11 0.715799 0.740332 -0.02453289 4.4340e-04 9.2181e-01 weaklyHypermeth 2.9709e-03 1.0000e+00 weaklyHypermeth 1.4358e-02 9.3522e-01 weaklyHypermeth 1.0041e-01 1.0000e+00 insignificant 0.0512216 4.9690e-02 weaklyHypermeth 3.6270e-01 insignificant 0.863402 0.8552632 -0.01405563 10 0.813102 0.742415 7.0687e-02 8.0268e-01 4.8417e-01 insignificant 1.0000e+00 1.000000 insignificant 5.2960e-01 0.67892347 insignificant 1.0000e+00 1.00000 insignificant -0.02021444 4.8851e-01 insignificant 1.0000e+00 insignificant 0.7682318 0.8559322 -0.1101180 10 0.758748 0.762616 -3.8673e-03 9.9982e-01 1.5278e-03 weaklyHypometh 1.0000e+00 1.4146e-02 weaklyHypometh 9.9781e-01 8.0780e-03 weaklyHypometh 1.0000e+00 9.1796e-02 weaklyHypometh -0.0714361 4.2177e-02 weaklyHypometh 0.37997720 insignificant chr1 2155582 2156582 17 SKI ENSG00000157933 0.637947 203 6 0.656067 391 8 0.610692 280 8 0.9304422 219 4 0.838874 202 9 0.8094220 488 6 0.7794495 267 9 0.622154 258 8 0.790258 246 8 0.722438 206 8 0.8262537 386 9 0.641216 148 8 0.716361 196 8 0.703303 183 6 0.734756 244 9 0.695581 129 8 0.772727 19 1 0.5103336 296 6 0.838339 417 9 0.9516975 362 6 0.839005 127 6 0.524790 57 3 0.706662 227 8 0.759156 146 5 0.6759259 62 5 0.7262994 426 8 0.670289 196 6 0.7642222 94 5 0.661443 403 8 0.830637 443 8 0.797494 439 8 0.949514 376 6 0.0027778 403 8 0.0071429 378 7 0.0000000 364 7 0.0000000 17 1 0.1455245 429 6 0.0884061 689 9 0.5642769 300 6 0.439638 309 6 0.5737554 67 4 0.6280294 272 4 0.529375 165 6 0.856359 0.689056 0.616592 0.8567043 0.7630528 0.916015 0.9169263 0.8402488 0.8643349 0.8795360 0.8703908 0.7570219 0.8442393 0.802387 0.8237970 0.67777165 0.809939 0.4671782 0.8482441 0.916402 0.856147 0.4609952 0.886242 0.8447610 0.706890 0.8609917 0.895056 0.9598088 0.762822 0.912857 0.841061 0.922607 0.0030267 0.0000000 0.0000000 0.0032174 0.0051616 0.0156278 0.4235295 0.497067 0.592442 0.5277085 0.544056 3 0.814008 0.864152 -0.04624488 8 0.680068 0.661456 0.01861127 0.8441694 0.00824982 weaklyHypometh 1 0.54999 insignificant 0.8055738 0.0789949 insignificant 1 1.00000 insignificant -0.00270422 0.9464773 insignificant 1 insignificant 0.814008 0.0096491 0.8057783 8 0.680068 0.133755 0.54631251 3.1158e-83 9.9999e-01 hypermethylated 1.5579e-80 1.0000e+00 hypermethylated 2.3125e-19 1.0000e+00 hypermethylated 4.6250e-17 1.0000e+00 hypermethylated 0.6987736 2.1788e-12 hypermethylated 1.4525e-10 hypermethylated 0.814008 0.4991007 0.3118526 6 0.680068 0.534263 0.14580429 3.0219e-19 9.9573e-01 hypermethylated 2.5183e-17 1.0000e+00 hypermethylated 1.3995e-07 9.9402e-01 hypermethylated 6.6644e-06 1.0000e+00 hypermethylated 0.1924006 7.2369e-04 weaklyHypermeth 3.0154e-02 weaklyHypermeth 0.864152 0.0096491 0.85626741 8 0.661456 0.133755 0.52770124 1.0651e-83 9.9995e-01 hypermethylated 5.3253e-81 1.0000e+00 hypermethylated 6.1762e-15 1.0000e+00 hypermethylated 8.8231e-13 1.0000e+00 hypermethylated 0.7014779 1.2983e-11 hypermethylated 2.5966e-09 hypermethylated 0.864152 0.4991007 0.36823857 6 0.661456 0.534263 1.2719e-01 5.2108e-24 9.4407e-01 hypermethylated 1.0422e-21 1.000000 hypermethylated 1.0812e-05 0.96734282 hypermethylated 3.4879e-04 1.00000 hypermethylated 0.19510481 8.7378e-04 weaklyHypermeth 3.6408e-02 weaklyHypermeth 0.0096491 0.4991007 -0.4919204 6 0.133755 0.534263 -4.0051e-01 1.0000e+00 7.5025e-30 hypomethylated 1.0000e+00 1.2504e-27 hypomethylated 1.0000e+00 7.9556e-09 hypomethylated 1.0000e+00 1.0220e-06 hypomethylated -0.5063730 1.2159e-06 hypomethylated 0.00051579 hypomethylated chr1 2367373 2368373 18 MORN1 ENSG00000116151 0.497695 357 15 0.516542 608 16 0.503825 595 16 0.4700835 464 14 0.429703 446 14 0.6138449 574 16 0.4707301 511 17 0.503749 582 16 0.516585 660 16 0.534140 749 16 0.6718637 577 16 0.658445 378 15 0.276448 646 16 0.558995 409 14 0.416470 703 15 0.626763 180 10 0.223710 155 7 0.4417656 582 15 0.288512 543 14 0.2603204 563 15 0.650463 271 15 0.274348 383 13 0.683046 463 16 0.574675 308 15 0.5848172 206 12 0.4391754 667 16 0.510265 585 16 0.6104596 392 15 0.516737 674 14 0.271628 939 16 0.348567 775 16 0.780331 473 16 0.1620234 659 16 0.1771123 482 16 0.3050925 528 13 0.2572917 102 10 0.1684272 555 17 0.2706714 813 16 0.1567282 717 15 0.284062 563 15 0.2702567 205 12 0.2377206 553 14 0.296525 454 15 0.436143 0.474110 0.451120 0.3790242 0.4086700 0.587876 0.4053705 0.4929525 0.4074529 0.5150950 0.6727116 0.5788680 0.1210153 0.513795 0.3715195 0.59718016 0.274219 0.3987385 0.2355579 0.242816 0.681747 0.1796545 0.614268 0.6212584 0.563534 0.3740906 0.440283 0.6979758 0.420819 0.197549 0.240241 0.735773 0.1263794 0.1306846 0.1847314 0.2032730 0.1512709 0.2004240 0.1438067 0.195569 0.186096 0.2033686 0.264686 10 0.447471 0.476858 -0.00874023 16 0.468164 0.448486 0.01967809 0.5376655 0.40367835 insignificant 1 1.00000 insignificant 0.9814366 0.2833268 insignificant 1 1.00000 insignificant -0.04636653 0.4076631 insignificant 1 insignificant 0.447384 0.2210895 0.2339663 16 0.443524 0.201850 0.24167370 3.6886e-30 1.0000e+00 hypermethylated 1.3173e-28 1.0000e+00 hypermethylated 1.2217e-20 1.0000e+00 hypermethylated 4.0722e-18 1.0000e+00 hypermethylated 0.2505732 3.4153e-06 hypermethylated 1.3661e-04 hypermethylated 0.447497 0.1829856 0.2290458 15 0.470493 0.244758 0.22573563 1.2225e-20 1.0000e+00 hypermethylated 1.3583e-18 1.0000e+00 hypermethylated 5.1569e-20 1.0000e+00 hypermethylated 2.5784e-17 1.0000e+00 hypermethylated 0.2249512 2.4708e-05 hypermethylated 1.6472e-03 hypermethylated 0.476858 0.2213010 0.24360286 16 0.448486 0.213064 0.23542193 2.8835e-18 1.0000e+00 hypermethylated 8.2386e-17 1.0000e+00 hypermethylated 4.8151e-17 1.0000e+00 hypermethylated 1.6050e-14 1.0000e+00 hypermethylated 0.2969397 4.3388e-05 hypermethylated 1.3358e-03 hypermethylated 0.477247 0.1829856 0.24292757 15 0.474868 0.244758 2.3011e-01 6.9338e-14 1.0000e+00 hypermethylated 5.7782e-12 1.000000 hypermethylated 2.1969e-14 0.99999964 hypermethylated 2.1969e-11 1.00000 hypermethylated 0.27131775 1.2425e-04 hypermethylated 9.5581e-03 hypermethylated 0.2216544 0.1829856 -0.0061690 15 0.225597 0.244758 -1.9160e-02 8.2825e-01 2.0667e-03 weaklyHypometh 1.0000e+00 1.8701e-02 weaklyHypometh 9.1936e-01 3.4930e-02 weaklyHypometh 1.0000e+00 2.8631e-01 insignificant -0.0256220 4.8928e-01 insignificant 1.00000000 insignificant chr1 2465878 2466878 19 HES5 ENSG00000197921 0.676487 112 6 0.738340 95 5 0.667312 93 6 0.6663528 132 6 0.662037 45 5 0.6763278 168 6 0.7204740 129 6 0.700073 105 6 0.783681 105 6 0.794218 90 6 0.7401194 125 6 0.809259 32 4 0.507993 101 6 0.875000 9 0 0.686510 95 6 0.638889 50 5 0.380482 45 3 0.4746032 53 4 0.492004 141 6 0.6364665 192 6 0.814484 73 6 0.519048 75 6 0.689884 131 6 0.817825 78 6 0.6728746 217 6 0.7148685 125 6 0.696955 66 4 0.7194805 45 4 0.752359 83 6 0.677391 144 6 0.674947 161 6 0.789683 179 6 0.2202739 126 6 0.2100211 139 6 0.4912008 188 5 0.3749118 125 6 0.2858178 89 6 0.2772506 232 6 0.1984455 145 5 0.300073 132 6 0.2087302 60 5 0.2674212 143 6 0.391304 113 6 0.686992 0.773279 0.705869 0.6846522 0.6953125 0.799920 0.7615450 0.7171769 0.8060330 0.7887525 0.7409086 0.8092593 0.5182269 0.752690 0.7248506 0.66267361 0.665483 0.6093171 0.5341213 0.675610 0.780924 0.5585565 0.722065 0.8111212 0.701565 0.7495256 0.798144 0.8344223 0.802240 0.710980 0.719764 0.796115 0.2500980 0.2746901 0.4813793 0.3967813 0.2420204 0.2996733 0.2187765 0.329661 0.189385 0.3457034 0.402717 5 0.673800 0.731105 -0.04486120 6 0.634346 0.758418 -0.12407193 0.9696530 0.25731596 insignificant 1 1.00000 insignificant 0.9903671 0.1926108 insignificant 1 1.00000 insignificant -0.04531868 0.2171246 insignificant 1 insignificant 0.673288 0.3191964 0.3963706 6 0.582110 0.391530 0.19057952 8.8838e-22 1.0000e+00 hypermethylated 2.1152e-20 1.0000e+00 hypermethylated 9.6856e-10 9.9999e-01 hypermethylated 3.0268e-08 1.0000e+00 hypermethylated 0.3564187 5.5917e-05 hypermethylated 1.5976e-03 hypermethylated 0.673640 0.2956081 0.4074084 6 0.679128 0.284749 0.39437870 3.0384e-25 1.0000e+00 hypermethylated 3.7980e-23 1.0000e+00 hypermethylated 5.1890e-12 1.0000e+00 hypermethylated 1.0378e-09 1.0000e+00 hypermethylated 0.3931365 6.1295e-06 hypermethylated 4.7150e-04 hypermethylated 0.731050 0.3191964 0.43804040 6 0.759620 0.391530 0.36809030 4.2938e-20 1.0000e+00 hypermethylated 1.3851e-18 1.0000e+00 hypermethylated 7.2920e-10 1.0000e+00 hypermethylated 2.7007e-08 1.0000e+00 hypermethylated 0.4017374 3.9083e-05 hypermethylated 1.2607e-03 hypermethylated 0.730657 0.2956081 0.44840320 6 0.719557 0.284749 4.3481e-01 1.8036e-25 1.0000e+00 hypermethylated 4.5090e-23 1.000000 hypermethylated 2.1132e-12 1.00000000 hypermethylated 7.0439e-10 1.00000 hypermethylated 0.43845521 7.6027e-06 hypermethylated 9.5034e-04 hypermethylated 0.3191964 0.2951096 0.0097005 6 0.391530 0.244071 1.4746e-01 7.7758e-01 4.0057e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0356e-01 3.7655e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0367178 5.2720e-01 insignificant 1.00000000 insignificant chr1 2735477 2736477 20 TTC34 ENSG00000215912 0.783172 195 7 0.750564 129 7 0.571574 190 7 0.8081758 226 7 0.886521 120 7 0.7922183 282 7 0.8610497 138 7 0.832837 176 7 0.835381 219 8 0.892212 167 7 0.7933681 134 7 0.699696 153 7 0.815920 148 7 0.884272 69 4 0.868095 167 7 0.783844 88 7 0.616944 187 7 0.7638980 223 7 0.912640 87 7 0.6619336 265 7 0.603595 58 4 0.617008 143 7 0.758980 144 7 0.687173 105 7 0.7239957 108 7 0.8765430 190 7 0.546266 121 7 0.7510721 102 5 0.888149 97 4 0.886305 182 7 0.908458 162 7 0.835326 301 7 0.2991209 231 7 0.0398737 92 7 0.2857143 141 7 0.4108902 73 6 0.1458696 140 6 0.2794790 174 7 0.7795087 266 7 0.819459 242 7 0.7793651 78 4 0.7973971 207 7 0.646856 211 7 0.758720 0.803849 0.658653 0.7687984 0.9191953 0.811816 0.8967562 0.7975549 0.8385702 0.8947814 0.7954178 0.7670632 0.7283914 0.889336 0.8466238 0.74155436 0.766293 0.7499491 0.8704932 0.627845 0.772578 0.6884389 0.888227 0.8456178 0.835726 0.8826513 0.583063 0.8457664 0.787307 0.917658 0.909112 0.878069 0.2149108 0.0551916 0.3773585 0.2768582 0.1368469 0.3141931 0.6928813 0.790284 0.839548 0.7535877 0.662749 4 0.790960 0.828955 -0.03710438 7 0.779149 0.766552 0.01259725 0.6441141 0.11250786 insignificant 1 1.00000 insignificant 0.5362042 0.3156300 insignificant 1 1.00000 insignificant 0.03380990 0.4262274 insignificant 1 insignificant 0.790960 0.2470588 0.5443934 7 0.779149 0.293373 0.48577603 1.2903e-45 1.0000e+00 hypermethylated 9.2165e-44 1.0000e+00 hypermethylated 1.7984e-16 1.0000e+00 hypermethylated 1.9982e-14 1.0000e+00 hypermethylated 0.5472246 4.1658e-05 hypermethylated 1.2624e-03 hypermethylated 0.790960 0.7390438 0.0493560 7 0.779149 0.789482 -0.01033262 1.0482e-01 6.9023e-01 insignificant 8.3856e-01 1.0000e+00 insignificant 1.0674e-01 7.4279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0261986 4.9574e-01 insignificant 1.0000e+00 insignificant 0.828955 0.2470588 0.57566568 7 0.766552 0.293373 0.47317878 5.6935e-35 9.9417e-01 hypermethylated 3.7957e-33 1.0000e+00 hypermethylated 1.0945e-12 9.9785e-01 hypermethylated 9.1210e-11 1.0000e+00 hypermethylated 0.5134147 1.4545e-05 hypermethylated 5.2922e-04 hypermethylated 0.828955 0.7390438 0.08680057 7 0.766552 0.789482 -2.2930e-02 1.1541e-02 6.3880e-01 weaklyHypermeth 1.1777e-01 1.000000 insignificant 2.2532e-02 0.67227696 weaklyHypermeth 2.6824e-01 1.00000 insignificant -0.00761126 8.7388e-01 insignificant 1.0000e+00 insignificant 0.2470588 0.7390438 -0.5006972 7 0.293373 0.789482 -4.9611e-01 1.0000e+00 1.6342e-18 hypomethylated 1.0000e+00 1.6342e-16 hypomethylated 1.0000e+00 1.3982e-08 hypomethylated 1.0000e+00 1.3287e-06 hypomethylated -0.5210259 3.4198e-05 hypomethylated 0.00355970 hypomethylated chr1 2905295 2906295 22 TTC34 ENSG00000215912 0.861073 223 6 0.846011 438 6 0.737421 123 6 0.7659322 154 5 0.851618 106 6 0.8643398 415 6 0.8482965 174 6 0.803355 132 6 0.790189 98 6 0.883333 101 5 0.8979524 364 6 0.832251 47 3 0.837357 91 4 0.923232 55 5 0.866374 116 6 0.776061 53 4 0.700855 131 3 0.7881380 212 4 0.944896 202 6 0.8051587 369 6 0.742063 79 5 0.846552 42 2 0.913531 171 6 0.773916 100 6 0.9804878 49 1 0.9350312 406 6 0.707356 94 4 0.8043707 100 7 0.833458 213 6 0.923729 439 6 0.940174 492 6 0.889090 324 6 0.4537131 343 6 0.3726261 194 6 0.3297980 384 5 0.2222222 13 2 0.3770843 327 6 0.5507690 413 6 0.7253003 410 6 0.861874 332 6 0.8884181 101 4 0.8371641 121 4 0.812406 231 5 0.746590 0.813375 0.691491 0.7690547 0.7657137 0.807515 0.7537015 0.6926608 0.6692052 0.8952186 0.8743967 0.7267050 0.6909749 0.856497 0.7698255 0.75642325 0.623795 0.6519237 0.9102456 0.695095 0.855586 0.7795058 0.854192 0.8954354 0.954111 0.9071392 0.636682 0.8993053 0.721545 0.862832 0.893083 0.865257 0.3937523 0.2912673 0.2835731 0.3337399 0.4603755 0.5205409 0.6233484 0.784917 0.899509 0.7565808 0.717989 3 0.806604 0.886807 -0.06417291 6 0.867822 0.783935 0.08388706 0.4505043 0.00020424 weaklyHypometh 1 0.20424 insignificant 0.8207463 0.0016345 weaklyHypometh 1 0.45542 insignificant -0.02628767 0.3693744 insignificant 1 insignificant 0.806604 0.4689367 0.3961457 6 0.867822 0.399499 0.46832268 1.4694e-30 1.0000e+00 hypermethylated 5.4421e-29 1.0000e+00 hypermethylated 3.3267e-10 1.0000e+00 hypermethylated 1.1471e-08 1.0000e+00 hypermethylated 0.4468234 8.7293e-05 hypermethylated 2.2383e-03 hypermethylated 0.806550 0.7447699 0.0374223 6 0.845792 0.814645 0.03114678 1.6732e-01 8.7255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7576e-01 7.2216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0061596 8.4952e-01 insignificant 1.0000e+00 insignificant 0.886807 0.4689367 0.43036747 6 0.783935 0.399499 0.38443562 4.0224e-28 1.0000e+00 hypermethylated 2.0112e-26 1.0000e+00 hypermethylated 6.8641e-12 1.0000e+00 hypermethylated 4.4846e-10 1.0000e+00 hypermethylated 0.4731110 1.4818e-05 hypermethylated 5.2922e-04 hypermethylated 0.891026 0.7447699 0.10124482 6 0.901770 0.814645 8.7125e-02 3.4815e-04 9.9998e-01 weaklyHypermeth 5.2751e-03 1.000000 weaklyHypermeth 6.5576e-02 0.99387709 insignificant 6.3042e-01 1.00000 insignificant 0.03244731 4.0664e-01 insignificant 1.0000e+00 insignificant 0.4692170 0.7447699 -0.3678976 6 0.466082 0.814645 -3.4856e-01 1.0000e+00 4.1119e-11 hypomethylated 1.0000e+00 1.4179e-09 hypomethylated 1.0000e+00 7.1380e-07 hypomethylated 1.0000e+00 4.1988e-05 hypomethylated -0.4406637 3.3261e-05 hypomethylated 0.00355970 hypomethylated chr1 3026942 3027942 26 PRDM16 ENSG00000142611 0.848813 514 12 0.808936 494 12 0.744891 453 12 0.8310200 371 12 0.758792 306 12 0.7801367 757 12 0.8037128 399 12 0.639386 409 12 0.761823 296 12 0.770243 369 12 0.8237144 646 12 0.875234 158 9 0.738157 437 12 0.797746 183 9 0.815561 361 12 0.856971 125 9 0.518680 77 5 0.7979939 534 12 0.774634 631 12 0.9063771 691 12 0.868110 270 12 0.557013 113 7 0.728540 420 11 0.836283 233 12 0.6883908 223 6 0.7848363 630 12 0.658019 412 12 0.7338297 165 11 0.897275 669 11 0.781939 655 12 0.816895 589 12 0.852774 731 12 0.6740203 498 12 0.6125074 589 12 0.6004107 402 10 0.7863725 105 7 0.6193330 420 13 0.7660788 789 12 0.7252814 494 12 0.741438 456 12 0.8086278 152 9 0.6214245 464 11 0.744186 398 12 0.852538 0.839140 0.870008 0.9252545 0.8011788 0.912898 0.8356446 0.8508172 0.8445017 0.8872801 0.8930879 0.8639806 0.8501045 0.897367 0.8812634 0.81739798 0.837919 0.8474938 0.8931634 0.895937 0.850456 0.7133105 0.871627 0.8885749 0.916053 0.8846597 0.888444 0.8928499 0.896532 0.866446 0.889171 0.911161 0.6571486 0.6447269 0.5932777 0.7138880 0.8005974 0.8208529 0.7790905 0.755608 0.762875 0.7211161 0.786560 9 0.864937 0.874877 -0.01739727 12 0.644673 0.697074 -0.05240094 0.9775839 0.04247517 weaklyHypometh 1 1.00000 insignificant 0.9735194 0.2570258 insignificant 1 1.00000 insignificant 0.01564910 0.6517879 insignificant 1 insignificant 0.865854 0.7034655 0.1606256 12 0.689140 0.525153 0.16398747 6.9079e-13 1.0000e+00 weaklyHypermeth 9.2106e-12 1.0000e+00 weaklyHypermeth 1.6050e-03 9.9854e-01 weaklyHypermeth 1.2943e-02 1.0000e+00 weaklyHypermeth 0.1061874 2.2775e-02 weaklyHypermeth 1.9301e-01 insignificant 0.865699 0.7615894 0.1045058 11 0.742126 0.658791 0.08333435 2.9932e-12 9.8875e-01 weaklyHypermeth 1.3014e-10 1.0000e+00 weaklyHypermeth 1.5008e-06 9.9833e-01 weaklyHypermeth 4.8411e-05 1.0000e+00 weaklyHypermeth 0.0544497 1.6789e-01 insignificant 1.0000e+00 insignificant 0.875467 0.7030692 0.18033319 12 0.653784 0.522866 0.13091768 9.5484e-11 1.0000e+00 weaklyHypermeth 1.3838e-09 1.0000e+00 weaklyHypermeth 8.6314e-03 9.9995e-01 weaklyHypermeth 6.4898e-02 1.0000e+00 weaklyHypermeth 0.0905383 6.0974e-02 insignificant 4.1551e-01 insignificant 0.875786 0.7617108 0.12620184 11 0.717720 0.677747 3.9972e-02 9.9188e-12 9.9995e-01 weaklyHypermeth 6.1992e-10 1.000000 weaklyHypermeth 5.2773e-06 0.99961754 weaklyHypermeth 1.8299e-04 1.00000 weaklyHypermeth 0.03880056 3.7038e-01 insignificant 1.0000e+00 insignificant 0.7042203 0.7620988 -0.0590973 11 0.617827 0.717615 -9.9788e-02 9.8384e-01 2.0438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5769e-01 6.7873e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0517377 2.7978e-01 insignificant 1.00000000 insignificant chr1 3124194 3125194 28 PRDM16 ENSG00000142611 0.838831 155 5 0.391414 36 2 0.682653 48 7 0.6188971 100 4 0.675926 42 3 0.7466024 185 5 0.7598116 38 3 0.866567 52 4 0.570000 24 3 0.750131 58 6 0.7760913 83 5 0.873016 21 1 0.620536 42 5 0.933333 15 1 0.566667 31 1 0.166667 15 1 0.503788 17 1 0.5168376 130 2 0.728409 85 2 0.9135220 103 4 0.693182 58 5 0.734524 29 3 0.621831 43 3 0.901136 57 6 0.7706718 55 2 0.8355519 75 5 0.456092 36 3 0.6325758 30 3 0.704183 52 2 0.879778 80 6 0.588426 57 5 0.946461 149 6 0.1200000 90 5 0.3210884 91 4 0.5000000 34 3 0.2214626 77 3 0.5282949 111 6 0.2975102 137 6 0.4222222 121 5 0.691015 107 5 0.5345049 84 3 0.6249756 129 3 0.492063 98 4 0.887570 0.323848 0.697038 0.7759001 0.8638211 0.860875 0.5805414 0.7580333 0.7065041 0.8314572 0.6837011 0.9396051 0.6864111 0.840146 0.7154472 0.43442752 0.618038 0.7437669 0.7549889 0.877474 0.627494 0.8008130 0.420653 0.9129712 0.877576 0.8449477 0.715956 0.6804003 0.684708 0.801355 0.786585 0.912679 0.2579042 0.1500581 0.3967045 0.3174281 0.4379275 0.3504408 0.4796748 0.780979 0.744981 0.8357338 0.510163 0 0.734118 0.777778 -0.04853082 5 0.612858 0.813880 -0.20102189 0.9961402 0.09259489 insignificant 1 1.00000 insignificant 0.9762250 0.4546437 insignificant 1 1.00000 insignificant -0.05538259 0.3590826 lowCoverage 1 lowCoverage 0.733542 0.3066914 0.4158518 5 0.569083 0.290489 0.27859331 9.6799e-16 9.9503e-01 hypermethylated 1.5365e-14 1.0000e+00 hypermethylated 2.5031e-04 9.9947e-01 hypermethylated 2.6074e-03 1.0000e+00 hypermethylated 0.3435923 1.3209e-03 lowCoverage 2.0967e-02 lowCoverage 0.735804 0.5650558 0.1358907 4 0.663383 0.536696 0.12668686 5.9870e-06 7.8810e-01 lowCoverage 1.2218e-04 1.0000e+00 lowCoverage 1.1221e-03 9.1792e-01 lowCoverage 2.0736e-02 1.0000e+00 lowCoverage 0.1220288 8.1017e-02 lowCoverage 7.3955e-01 lowCoverage 0.776699 0.3066914 0.45907799 6 0.755746 0.290489 0.46525650 3.3179e-15 9.9987e-01 hypermethylated 6.7712e-14 1.0000e+00 hypermethylated 1.6916e-04 1.0000e+00 hypermethylated 2.1687e-03 1.0000e+00 hypermethylated 0.3989749 5.1545e-04 lowCoverage 9.7254e-03 lowCoverage 0.776671 0.5650558 0.17983940 4 0.834830 0.536696 2.9813e-01 3.4920e-06 9.5644e-01 lowCoverage 7.4297e-05 1.000000 lowCoverage 3.1142e-03 0.98860924 lowCoverage 5.1903e-02 1.00000 lowCoverage 0.17741137 1.8265e-02 lowCoverage 3.3824e-01 lowCoverage 0.3106061 0.5650558 -0.2931602 4 0.373352 0.536696 -1.6334e-01 9.8698e-01 2.2565e-03 lowCoverage 1.0000e+00 1.9969e-02 lowCoverage 9.9179e-01 9.6000e-02 lowCoverage 1.0000e+00 6.4865e-01 lowCoverage -0.2215636 2.2803e-02 lowCoverage 0.24003163 lowCoverage chr1 3918407 3919407 34 C1orf174 ENSG00000198912 0.813716 219 6 0.793730 253 7 0.805739 182 7 0.9092450 191 5 0.735863 182 7 0.8863057 285 7 0.6734313 246 7 0.807047 149 7 0.842007 138 7 0.673823 126 7 0.8571887 227 7 0.732233 137 7 0.678698 180 7 0.556090 93 4 0.831123 159 7 0.652781 135 7 0.608233 76 4 0.7941639 268 6 0.878377 227 7 0.8639315 186 7 0.867532 77 7 0.635529 53 3 0.822117 167 7 0.847411 122 7 0.7428981 189 5 0.8276099 277 7 0.802325 97 5 0.7418968 86 7 0.836870 209 7 0.868105 272 7 0.821870 253 7 0.883092 210 7 0.4796831 234 7 0.4081840 173 7 0.4323137 181 5 0.3000000 21 1 0.4691666 206 7 0.4710209 274 7 0.6151507 205 7 0.821895 144 7 0.8905195 120 5 0.8192970 228 6 0.870787 130 6 0.827118 0.774069 0.799219 0.9088581 0.6930411 0.828900 0.7419639 0.8281948 0.8428035 0.7603380 0.8221047 0.7296297 0.7703915 0.609645 0.8650620 0.73860941 0.729492 0.8224851 0.8551690 0.864252 0.873140 0.7736895 0.842731 0.7942731 0.867927 0.8273884 0.783901 0.6918354 0.850151 0.848063 0.838416 0.883580 0.4462430 0.4367165 0.4280122 0.2795455 0.5478122 0.4039836 0.7331283 0.828920 0.836939 0.8189267 0.890107 4 0.795846 0.839960 -0.04294517 7 0.786682 0.813921 -0.02723857 0.9845673 0.00615171 weaklyHypometh 1 0.51264 insignificant 0.9589562 0.0478772 weaklyHypometh 1 1.00000 insignificant -0.03841842 0.2138763 insignificant 1 insignificant 0.795846 0.3370064 0.4439268 7 0.786682 0.402070 0.38461203 3.1380e-38 1.0000e+00 hypermethylated 1.4943e-36 1.0000e+00 hypermethylated 1.1246e-10 9.9858e-01 hypermethylated 4.1651e-09 1.0000e+00 hypermethylated 0.3429583 4.3872e-07 hypermethylated 1.9075e-05 hypermethylated 0.795846 0.8125756 -0.0026059 6 0.786682 0.673851 0.11283145 7.9498e-03 6.5736e-01 inconclusive 8.5481e-02 1.0000e+00 inconclusive 1.1429e-01 5.1391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0338437 5.5436e-01 insignificant 1.0000e+00 insignificant 0.839960 0.3370064 0.48445965 7 0.813921 0.402070 0.41185060 1.1979e-29 1.0000e+00 hypermethylated 6.3046e-28 1.0000e+00 hypermethylated 1.0849e-09 9.9963e-01 hypermethylated 3.8745e-08 1.0000e+00 hypermethylated 0.3813767 4.0964e-07 hypermethylated 1.8620e-05 hypermethylated 0.839960 0.8125756 0.03455774 6 0.813921 0.673851 1.4007e-01 4.8565e-04 6.0338e-01 weaklyHypermeth 6.8401e-03 1.000000 weaklyHypermeth 1.4468e-01 0.42813625 insignificant 1.0000e+00 1.00000 insignificant 0.00457474 9.3444e-01 insignificant 1.0000e+00 insignificant 0.3370064 0.8125756 -0.3709578 6 0.402070 0.673851 -2.7178e-01 9.9971e-01 1.1136e-10 hypomethylated 1.0000e+00 3.5922e-09 hypomethylated 9.9892e-01 2.6384e-06 hypomethylated 1.0000e+00 1.1536e-04 hypomethylated -0.3768020 4.0474e-04 hypomethylated 0.01445513 hypomethylated chr1 5102711 5103711 92 AJAP1 ENSG00000196581 0.924383 516 8 0.808725 541 13 0.722209 258 9 0.8753535 335 8 0.746326 182 7 0.8565323 656 8 0.8180692 246 9 0.895957 353 8 0.886136 243 8 0.922361 202 8 0.8667972 521 13 0.905400 159 12 0.890593 222 8 0.743116 142 7 0.918978 299 8 0.770187 126 8 0.830952 24 2 0.7339239 360 7 0.871006 433 7 0.8679914 551 8 0.809484 146 8 0.802838 137 6 0.811491 255 8 0.731993 155 8 0.8397727 81 5 0.9061892 494 13 0.767866 209 10 0.7560976 182 8 0.912652 466 8 0.905167 555 13 0.911816 574 13 0.925378 530 8 0.4437120 431 13 0.3957111 220 11 0.1449275 167 5 0.7973064 91 6 0.4320124 443 8 0.5332934 491 13 0.6837971 562 8 0.765712 466 7 0.6607598 171 7 0.8426404 382 7 0.762125 415 7 0.882317 0.745555 0.669019 0.8579325 0.8340169 0.877117 0.8218766 0.8600589 0.8120700 0.8876919 0.9348770 0.8661699 0.8284952 0.792276 0.8789734 0.86127748 0.712266 0.8484030 0.9072557 0.839939 0.820223 0.6783728 0.802053 0.8228753 0.836396 0.8983710 0.778803 0.8584405 0.817161 0.912427 0.881987 0.863655 0.3852010 0.2829364 0.3707382 0.5744689 0.4537931 0.3878168 0.6406082 0.740108 0.735550 0.8602923 0.644504 5 0.858220 0.868059 -0.00477420 8 0.754067 0.826234 -0.07216746 0.8685561 0.64147983 insignificant 1 1.00000 insignificant 0.7965258 0.8427466 insignificant 1 1.00000 insignificant 0.00268771 0.9156798 insignificant 1 insignificant 0.858602 0.4174810 0.4573241 8 0.837981 0.433060 0.40492129 7.6063e-61 1.0000e+00 hypermethylated 1.0866e-58 1.0000e+00 hypermethylated 2.0483e-20 1.0000e+00 hypermethylated 5.1207e-18 1.0000e+00 hypermethylated 0.3849227 6.1534e-03 weaklyHypermeth 7.1551e-02 weaklyHypermeth 0.858354 0.7224449 0.1419275 7 0.804338 0.750878 0.05345990 6.4584e-11 9.7811e-01 weaklyHypermeth 2.4840e-09 1.0000e+00 weaklyHypermeth 5.4194e-04 9.8459e-01 weaklyHypermeth 1.0839e-02 1.0000e+00 weaklyHypermeth 0.0997431 3.2566e-02 weaklyHypermeth 4.2293e-01 insignificant 0.868944 0.4177971 0.45592147 8 0.867983 0.470856 0.39712739 8.0613e-40 1.0000e+00 hypermethylated 6.2010e-38 1.0000e+00 hypermethylated 1.4977e-16 1.0000e+00 hypermethylated 3.7444e-14 1.0000e+00 hypermethylated 0.3822350 6.0124e-03 weaklyHypermeth 7.3322e-02 weaklyHypermeth 0.868024 0.7224449 0.15043918 7 0.814650 0.750878 6.3772e-02 6.5875e-09 9.8949e-01 weaklyHypermeth 2.6350e-07 1.000000 weaklyHypermeth 3.0698e-03 0.97786557 weaklyHypermeth 5.1903e-02 1.00000 weaklyHypermeth 0.09705536 3.7397e-02 weaklyHypermeth 4.9104e-01 insignificant 0.4174810 0.7236181 -0.3022110 7 0.433060 0.780703 -3.4764e-01 1.0000e+00 3.9051e-12 hypomethylated 1.0000e+00 1.5020e-10 hypomethylated 1.0000e+00 4.7721e-07 hypomethylated 1.0000e+00 2.9826e-05 hypomethylated -0.2851796 1.9806e-02 weaklyHypometh 0.22006781 insignificant chr1 6425869 6426869 136 ESPN ENSG00000187017 0.813807 150 7 0.765286 159 8 0.775003 312 9 0.8690972 146 6 0.719767 90 6 0.8178244 303 8 0.8048718 115 8 0.716129 142 7 0.812785 185 8 0.752139 212 8 0.6849432 231 8 0.750619 123 8 0.761020 197 8 0.737955 109 4 0.738290 190 7 0.673777 79 6 0.513934 48 6 0.7688607 161 7 0.811031 103 7 0.7350241 189 9 0.820347 126 8 0.727770 111 4 0.788047 190 9 0.622045 104 8 0.7554043 97 6 0.7998300 187 8 0.630346 196 8 0.6494028 126 7 0.805237 118 8 0.885143 184 8 0.722879 241 9 0.839006 240 8 0.5773665 199 9 0.6218052 130 6 0.7545218 183 7 0.6129690 56 7 0.7437871 114 8 0.6098932 206 8 0.6384480 117 7 0.709921 109 7 0.6492472 52 3 0.6914733 113 8 0.783263 97 7 0.725139 0.637285 0.666683 0.7702154 0.6671063 0.724989 0.7197856 0.6625586 0.7297080 0.6846444 0.6170550 0.6212540 0.7217906 0.745685 0.6766584 0.54412477 0.498235 0.6564490 0.7259133 0.688889 0.761476 0.6841731 0.648904 0.6208817 0.740359 0.7162537 0.627438 0.6606271 0.762224 0.797830 0.639110 0.713382 0.5400357 0.5109043 0.5103337 0.4829895 0.6101284 0.5530099 0.5727425 0.610067 0.634553 0.6797414 0.694833 3 0.717016 0.728125 -0.00804259 8 0.780420 0.774730 0.00568983 0.2367606 0.61614024 insignificant 1 1.00000 insignificant 0.5360842 0.5854180 insignificant 1 1.00000 insignificant -0.00267992 0.9287939 insignificant 1 insignificant 0.717016 0.5968468 0.1519023 8 0.780420 0.651610 0.12880936 3.1003e-10 9.9960e-01 weaklyHypermeth 3.5231e-09 1.0000e+00 weaklyHypermeth 1.7204e-05 9.9709e-01 weaklyHypermeth 2.4231e-04 1.0000e+00 weaklyHypermeth 0.0977177 2.3425e-02 weaklyHypermeth 1.9521e-01 insignificant 0.717016 0.6598361 0.0830140 7 0.780420 0.691717 0.08870301 2.2431e-05 9.9094e-01 weaklyHypermeth 4.0055e-04 1.0000e+00 weaklyHypermeth 2.3873e-02 9.5980e-01 weaklyHypermeth 2.9114e-01 1.0000e+00 insignificant 0.0566376 1.0313e-01 insignificant 8.8904e-01 insignificant 0.728125 0.5968468 0.14826707 9 0.774730 0.651610 0.12311953 1.4883e-06 9.9947e-01 weaklyHypermeth 1.3055e-05 1.0000e+00 weaklyHypermeth 1.2733e-04 9.9917e-01 weaklyHypermeth 1.6536e-03 1.0000e+00 weaklyHypermeth 0.1003976 2.7033e-02 weaklyHypermeth 2.2158e-01 insignificant 0.728125 0.6598361 0.08041990 7 0.774730 0.691717 8.3013e-02 1.7875e-03 9.9827e-01 weaklyHypermeth 2.2627e-02 1.000000 weaklyHypermeth 2.0071e-02 0.97976801 weaklyHypermeth 2.4805e-01 1.00000 insignificant 0.05931751 1.2392e-01 insignificant 1.0000e+00 insignificant 0.5968468 0.6598361 -0.0784064 7 0.651610 0.691717 -4.0106e-02 7.4304e-01 3.5662e-02 weaklyHypometh 1.0000e+00 2.3008e-01 insignificant 6.9929e-01 9.0110e-02 insignificant 1.0000e+00 6.2577e-01 insignificant -0.0410801 3.3455e-01 insignificant 1.00000000 insignificant chr1 6470975 6471975 137 PLEKHG5 ENSG00000171680 0.840273 120 4 0.775139 69 5 0.705238 76 5 0.8460833 166 4 0.711667 34 5 0.8360641 157 5 0.8285714 20 2 0.805532 66 4 0.802262 65 5 0.893333 44 4 0.8788971 110 5 0.750000 19 0 0.853447 90 5 0.750000 4 0 0.672554 40 5 0.312500 14 0 0.883333 19 1 0.6660200 152 4 0.716788 74 5 0.8413945 159 5 0.720000 37 4 0.710164 113 5 0.730065 78 5 0.657079 63 5 0.8272727 70 4 0.8831194 120 5 0.741484 95 5 0.7734615 42 4 0.715035 72 4 0.871310 89 5 0.832035 80 5 0.819479 165 5 0.5671292 60 4 0.8196970 74 4 0.6210526 118 4 0.6704545 24 2 0.6953038 90 5 0.6324633 132 5 0.6754204 96 4 0.792104 121 4 0.7476190 43 4 0.6742652 86 4 0.697153 73 4 0.811624 0.797224 0.666988 0.8055952 0.7206960 0.817659 0.7456829 0.8180682 0.7621415 0.8684982 0.8713841 0.8241758 0.8424779 NA 0.6305599 0.33734996 0.875458 0.5852263 0.6763370 0.801736 0.702198 0.6933041 0.731395 0.5971033 0.771728 0.8770839 0.729982 0.7594041 0.660417 0.830769 0.810999 0.812933 0.6590429 0.7753497 0.6078658 0.6517483 0.6978293 0.6092902 0.6054675 0.721548 0.692569 0.5863642 0.639929 1 0.771028 0.767578 0.00740880 5 0.787743 0.778962 0.00878098 0.2949861 0.42747524 insignificant 1 1.00000 insignificant 0.6580230 0.5964470 insignificant 1 1.00000 insignificant -0.00492046 0.8904821 lowCoverage 1 lowCoverage 0.771028 0.6807229 0.0874778 4 0.787743 0.662892 0.12485040 2.4361e-04 4.5523e-01 lowCoverage 1.5322e-03 1.0000e+00 lowCoverage 1.4981e-01 6.5030e-01 lowCoverage 7.6047e-01 1.0000e+00 lowCoverage 0.1007715 4.6309e-02 lowCoverage 3.2612e-01 lowCoverage 0.771028 0.6133652 0.1326697 4 0.787743 0.715685 0.07205735 2.3274e-03 5.4854e-01 lowCoverage 2.9092e-02 1.0000e+00 lowCoverage 9.6073e-03 3.5109e-01 lowCoverage 1.3725e-01 1.0000e+00 lowCoverage 0.0511425 1.8176e-01 lowCoverage 1.0000e+00 lowCoverage 0.767578 0.6807229 0.08367173 4 0.778962 0.662892 0.11606942 9.3578e-03 5.2923e-01 lowCoverage 5.1096e-02 1.0000e+00 lowCoverage 2.9838e-01 8.1213e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1056919 3.0781e-02 lowCoverage 2.4048e-01 lowCoverage 0.767578 0.6133652 0.12895341 4 0.778962 0.715685 6.3276e-02 4.1137e-04 2.3123e-01 lowCoverage 6.1399e-03 1.000000 lowCoverage 6.0492e-03 0.20969350 lowCoverage 8.9198e-02 1.00000 lowCoverage 0.05606299 9.8172e-02 lowCoverage 9.4396e-01 lowCoverage 0.6807229 0.6133652 0.0810357 4 0.662892 0.715685 -5.2793e-02 4.9191e-03 5.7398e-02 lowCoverage 2.5890e-01 3.4166e-01 lowCoverage 6.4241e-02 2.9281e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0496289 2.7136e-01 lowCoverage 1.00000000 lowCoverage chr1 6615086 6616086 139 THAP3 ENSG00000041988 0.958159 339 6 0.717560 460 11 0.841569 291 10 0.9455620 363 11 0.939068 131 5 0.9410244 420 11 0.6239414 271 8 0.759077 418 11 0.836183 261 10 0.803854 294 12 0.8275815 526 13 0.847003 119 4 0.849259 475 11 0.871636 266 6 0.864413 418 10 0.521044 86 4 0.785714 26 1 0.6980768 411 13 0.856020 391 13 0.7902453 301 7 0.742207 118 10 0.881347 161 7 0.582976 222 10 0.838810 95 7 0.9226221 173 11 0.9291349 630 13 0.829310 251 11 0.6878388 82 4 0.949436 556 10 0.935974 734 13 0.927591 612 13 0.885769 462 12 0.8408399 330 9 0.7705128 260 13 0.8676471 118 5 0.8818182 93 5 0.7948911 236 13 0.9228954 564 13 0.8172161 325 10 0.944874 481 11 0.8439841 160 7 0.7488941 350 8 0.863038 291 12 0.916907 0.900467 0.902759 0.9670335 0.9406783 0.943598 0.8688863 0.9292578 0.8886796 0.9548393 0.9251998 0.8020088 0.9497435 0.969468 0.9781949 0.73808915 0.976301 0.9474463 0.9540652 0.956475 0.911244 0.9648395 0.890101 0.9306928 0.914353 0.9700040 0.928481 0.8636669 0.945118 0.962137 0.964243 0.946644 0.7973158 0.9208248 0.9572010 0.9931647 0.9355298 0.9468165 0.9290153 0.973606 0.926561 0.9699389 0.945951 4 0.908888 0.925012 -0.02652515 10 0.739763 0.751697 -0.01193433 1.0000000 0.02746381 weaklyHypometh 1 0.98514 insignificant 0.9907222 0.6349003 insignificant 1 1.00000 insignificant -0.02890192 0.4923144 insignificant 1 insignificant 0.909808 0.8894441 0.0189326 10 0.781597 0.773498 0.00809886 7.3653e-02 3.4209e-01 insignificant 3.4907e-01 1.0000e+00 insignificant 9.7445e-01 1.2717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0325846 3.4796e-01 insignificant 1.0000e+00 insignificant 0.910763 0.9508401 -0.0290131 6 0.805406 0.827211 -0.02180492 9.9939e-01 2.4358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8177e-01 2.5174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0297518 4.7785e-01 insignificant 1.0000e+00 insignificant 0.927134 0.8894441 0.04101415 12 0.783584 0.773498 0.01008549 2.1410e-02 9.2408e-01 weaklyHypermeth 1.1093e-01 1.0000e+00 insignificant 9.1355e-01 4.8645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0036827 9.2870e-01 insignificant 1.0000e+00 insignificant 0.926316 0.9508401 -0.01405815 8 0.796867 0.827211 -3.0344e-02 9.6077e-01 7.5454e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9691e-01 0.51346545 insignificant 1.0000e+00 1.00000 insignificant -0.00084987 9.8558e-01 insignificant 1.0000e+00 insignificant 0.8916719 0.9558728 -0.0584674 8 0.883998 0.919825 -3.5827e-02 9.7237e-01 4.4851e-02 weaklyHypometh 1.0000e+00 2.8208e-01 insignificant 9.7884e-01 6.5891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0028328 9.4446e-01 insignificant 1.00000000 insignificant chr1 6943834 6944834 175 ENSG00000219260 0.257294 757 20 0.225292 651 19 0.201378 702 19 0.2626290 833 19 0.149533 533 15 0.3772379 1083 20 0.2637971 680 15 0.235541 627 19 0.187439 974 19 0.213828 834 19 0.2285666 704 19 0.245869 653 15 0.212290 854 19 0.235431 398 17 0.168163 886 19 0.201997 655 19 0.158024 556 10 0.3159257 937 19 0.242357 550 20 0.2104428 882 20 0.262936 343 20 0.178773 637 18 0.267464 658 20 0.191109 523 19 0.2431427 425 15 0.2256418 957 20 0.197120 832 19 0.1993931 544 17 0.213665 522 19 0.249750 1070 20 0.225326 929 20 0.258122 939 20 0.4414251 562 19 0.3255629 530 19 0.4179012 159 7 0.5486520 196 10 0.5545493 426 19 0.4617893 694 20 0.2508197 980 18 0.300241 806 20 0.2413167 397 16 0.2173538 633 20 0.274135 806 17 0.105780 0.106265 0.094525 0.1140842 0.0779248 0.143899 0.1294208 0.1185895 0.0920730 0.1186189 0.1343161 0.1423083 0.1229393 0.133502 0.1004742 0.09407570 0.043165 0.1470872 0.0898273 0.093795 0.113258 0.0705639 0.140295 0.1155360 0.119903 0.0936222 0.096448 0.0806948 0.107951 0.094952 0.080259 0.125968 0.3315699 0.2525370 0.3128624 0.3632062 0.4752086 0.2427190 0.1128607 0.147038 0.080014 0.0910683 0.176802 11 0.139486 0.146796 0.01172381 19 0.224056 0.220080 0.00397590 0.0707466 0.94396863 insignificant 1 1.00000 insignificant 0.0941386 0.9964044 insignificant 1 1.00000 insignificant 0.00361477 0.8066932 insignificant 1 insignificant 0.139552 0.3922867 -0.2153465 19 0.241980 0.438665 -0.19668518 1.0000e+00 3.5646e-52 hypomethylated 1.0000e+00 3.5646e-49 hypomethylated 1.0000e+00 1.4528e-22 hypomethylated 1.0000e+00 1.4528e-19 hypomethylated -0.2286616 7.4865e-04 hypomethylated 1.3369e-02 hypomethylated 0.139540 0.1733849 -0.0146399 17 0.260396 0.224967 0.03542896 9.5011e-01 3.1212e-04 weaklyHypometh 1.0000e+00 5.2019e-02 weaklyHypometh 6.9743e-01 1.2114e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0271216 1.7036e-01 insignificant 1.0000e+00 insignificant 0.146848 0.3922867 -0.22818676 19 0.237686 0.438665 -0.20097915 1.0000e+00 2.5884e-33 hypomethylated 1.0000e+00 2.5884e-30 hypomethylated 1.0000e+00 4.0704e-20 hypomethylated 1.0000e+00 4.0704e-17 hypomethylated -0.2322763 8.6550e-04 hypomethylated 1.4425e-02 hypomethylated 0.145916 0.1734328 -0.02490553 18 0.214876 0.234748 -1.9872e-02 9.9854e-01 2.8371e-05 weaklyHypometh 1.0000e+00 0.014186 weaklyHypometh 9.8074e-01 0.01448282 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.03073632 1.0613e-01 insignificant 9.9187e-01 insignificant 0.3922717 0.1735286 0.1830371 17 0.453029 0.245419 2.0761e-01 6.9849e-14 1.0000e+00 weaklyHypermeth 6.9849e-11 1.0000e+00 weaklyHypermeth 8.7752e-10 1.0000e+00 weaklyHypermeth 8.7752e-07 1.0000e+00 weaklyHypermeth 0.2015400 1.3589e-03 weaklyHypermeth 0.03235473 weaklyHypermeth chr1 7315984 7316984 233 ENSG00000207056 0.781477 387 6 0.900179 244 6 0.828448 108 6 0.9258295 343 6 0.871585 123 5 0.9286465 614 6 0.8377130 176 6 0.823379 152 6 0.868502 101 6 0.775714 56 3 0.9476997 403 6 0.777778 40 3 0.796296 106 4 0.871528 46 3 0.971678 139 4 1.000000 11 0 NA 0 0 0.8871771 533 6 0.963018 294 4 0.9110332 482 6 0.909524 48 3 1.000000 8 0 0.944562 158 6 0.986111 75 4 0.8691128 162 4 0.9367082 277 6 0.803968 108 4 0.8772894 44 3 0.880634 275 5 0.920100 227 6 0.908649 326 6 0.950293 369 6 0.9369498 213 6 0.8266033 194 6 0.8571429 95 2 0.7952070 57 4 0.6792179 249 6 0.9370823 364 6 0.9355079 463 6 0.910431 386 6 0.8645166 180 6 0.9301375 276 4 0.902721 335 6 0.903040 0.898657 0.815362 0.9533329 0.9091007 0.957370 0.8965737 0.9330288 0.8946620 0.9491406 0.9380870 0.9135934 0.8729713 0.903792 0.9546890 1.00000000 NA 0.9069598 0.9528588 0.903926 0.857785 0.9773053 0.950924 0.9794007 0.915180 0.9414287 0.881006 0.9071490 0.897011 0.933029 0.927062 0.956098 0.9543584 0.8666208 1.0000000 0.7096277 0.8669904 0.8963466 0.9439902 0.924097 0.866895 0.8921277 0.938201 1 0.926096 0.920964 -0.00074899 6 0.817077 0.921701 -0.10462326 0.3477899 0.11253553 insignificant 1 1.00000 insignificant 0.7004146 0.0539909 insignificant 1 1.00000 insignificant -0.03833310 0.0957480 lowCoverage 1 lowCoverage 0.926096 0.9067579 0.0160051 6 0.817077 0.877363 -0.06028592 3.4614e-01 4.7424e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2376e-01 1.3205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0385458 3.9801e-01 lowCoverage 1.0000e+00 lowCoverage 0.926930 0.9146341 0.0089349 6 0.919924 0.896916 0.02300791 1.0861e-01 7.0743e-01 insignificant 8.4855e-01 1.0000e+00 insignificant 2.2124e-01 9.0373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0314164 1.3896e-01 lowCoverage 1.0000e+00 lowCoverage 0.920964 0.9067579 0.01862280 6 0.921701 0.877363 0.04433734 2.8180e-01 7.1903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2114e-01 6.0296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0768789 1.1667e-01 lowCoverage 6.9448e-01 lowCoverage 0.920888 0.9146341 0.01244813 6 0.908651 0.896916 1.1735e-02 1.5582e-01 5.5733e-01 insignificant 1.0000e+00 1.000000 insignificant 1.1530e-01 0.88237246 insignificant 9.4707e-01 1.00000 insignificant 0.00691669 7.3496e-01 lowCoverage 1.0000e+00 lowCoverage 0.9078381 0.9146341 -0.0059258 6 0.898590 0.896916 1.6748e-03 7.0163e-01 6.6970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9066e-01 9.6712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0699622 1.4369e-01 insignificant 0.91152367 insignificant chr1 7428475 7429475 244 ENSG00000207056 0.936631 285 9 0.897456 412 12 0.869475 247 11 0.9530860 325 10 0.965714 68 6 0.8894298 359 10 0.9257530 163 9 0.953632 237 10 0.901515 176 9 0.957471 143 8 0.9454967 414 10 0.875238 67 4 0.891000 302 8 0.951895 245 8 0.960203 131 9 0.965535 51 2 0.964646 41 1 0.7788342 311 10 0.770974 276 10 0.9477978 286 10 0.825486 107 8 0.968074 113 7 0.928730 176 11 0.865686 109 9 0.9404543 184 10 0.9363323 548 12 0.876417 145 7 0.7383929 33 2 0.892376 316 9 0.954806 536 12 0.930526 534 12 0.935523 384 9 0.9028496 327 12 0.8987823 186 10 0.7236021 321 6 0.7832145 226 7 0.8067168 239 10 0.9008043 494 12 0.9532575 219 10 0.968318 309 10 0.9861284 106 8 0.9030601 179 6 0.879296 321 10 0.890982 0.865711 0.847053 0.9438831 0.9223100 0.857148 0.9331451 0.9315366 0.8287234 0.9318050 0.9055404 0.8567376 0.9463961 0.909169 0.9288431 0.92428948 0.914229 0.8534981 0.8313352 0.908838 0.816867 0.9459726 0.926222 0.9350855 0.929922 0.9009142 0.876174 0.7740752 0.848193 0.943776 0.898782 0.891753 0.7929783 0.8137884 0.6390499 0.7904307 0.7841378 0.7522766 0.8979677 0.947415 0.982882 0.8552619 0.896847 5 0.908269 0.919937 -0.00699911 10 0.895708 0.901861 -0.00615298 0.8767942 0.39783212 insignificant 1 1.00000 insignificant 0.5435953 0.7913086 insignificant 1 1.00000 insignificant 0.01568899 0.4999421 insignificant 1 insignificant 0.908208 0.8661461 0.0702941 10 0.888258 0.839974 0.04828383 1.8009e-04 6.5334e-01 weaklyHypermeth 1.1398e-03 1.0000e+00 weaklyHypermeth 9.0762e-03 9.0166e-01 weaklyHypermeth 6.2594e-02 1.0000e+00 weaklyHypermeth 0.0790942 5.1721e-02 insignificant 3.5025e-01 insignificant 0.908488 0.9373898 -0.0243881 10 0.914079 0.930052 -0.01597253 9.8450e-01 3.6701e-03 weaklyHypometh 1.0000e+00 3.5359e-01 insignificant 9.9275e-01 2.1228e-02 weaklyHypometh 1.0000e+00 9.4061e-01 insignificant -0.0229229 3.6732e-01 insignificant 1.0000e+00 insignificant 0.919912 0.8661461 0.05918842 10 0.894851 0.839974 0.05487631 1.7166e-03 8.3553e-01 weaklyHypermeth 1.0404e-02 1.0000e+00 weaklyHypermeth 1.5350e-02 5.7779e-01 weaklyHypermeth 1.0586e-01 1.0000e+00 insignificant 0.0634053 1.1547e-01 insignificant 6.9143e-01 insignificant 0.920440 0.9373898 -0.01916175 10 0.932881 0.930052 2.8298e-03 8.8128e-01 2.6637e-03 weaklyHypometh 1.0000e+00 0.596075 insignificant 9.8493e-01 0.00180349 weaklyHypometh 1.0000e+00 0.60116 insignificant -0.03861188 1.8978e-01 insignificant 1.0000e+00 insignificant 0.8665550 0.9373898 -0.0856270 10 0.896637 0.930052 -3.3415e-02 9.9975e-01 1.4211e-03 weaklyHypometh 1.0000e+00 1.3542e-02 weaklyHypometh 9.9998e-01 5.9829e-03 weaklyHypometh 1.0000e+00 7.0387e-02 weaklyHypometh -0.1020171 2.4038e-02 weaklyHypometh 0.25039901 insignificant chr1 7484539 7485539 250 CAMTA1 ENSG00000171735 0.876346 208 8 0.792676 216 4 0.696366 150 4 0.7782715 149 4 0.807143 34 4 0.8663643 478 8 0.7760377 98 4 0.841386 258 8 0.804724 238 8 0.851382 172 4 0.8981802 134 4 0.773443 87 4 0.711345 226 8 0.783470 115 8 0.821676 197 8 0.757937 63 2 0.691667 34 4 0.6566428 280 8 0.842303 177 4 0.8269053 168 4 0.846712 74 4 0.644086 79 4 0.869585 79 4 0.792298 108 6 0.7883760 76 4 0.7543677 230 4 0.623648 127 4 0.6857057 124 4 0.824640 149 4 0.593134 268 4 0.825812 240 4 0.840728 172 4 0.6207861 247 4 0.8575521 122 6 0.4310606 157 3 0.5190476 25 2 0.3768396 163 4 0.4011180 236 4 0.8060747 240 8 0.634740 179 4 0.6919192 87 4 0.6450538 146 6 0.645956 194 8 0.862185 0.774750 0.743187 0.7759029 0.8660929 0.850666 0.7649053 0.8293538 0.6992907 0.8296156 0.8752802 0.7423143 0.6119285 0.773536 0.7488130 0.73497163 0.629987 0.6422207 0.7823768 0.804314 0.858645 0.6858229 0.892895 0.8243175 0.724084 0.7440380 0.787501 0.8815538 0.831871 0.738184 0.803381 0.848301 0.6083567 0.8541667 0.5443000 0.4105183 0.4147235 0.3635281 0.7388694 0.737909 0.702122 0.5070757 0.758645 4 0.792361 0.800464 -0.01802472 4 0.830766 0.698657 0.13210903 0.5477920 0.64086737 lowCoverage 1 1.00000 lowCoverage 0.6208950 0.5469828 lowCoverage 1 1.00000 lowCoverage 0.03528883 0.2760553 lowCoverage 1 lowCoverage 0.792301 0.5378947 0.2212065 4 0.809612 0.717206 0.09240617 2.8605e-08 6.9595e-01 lowCoverage 2.6243e-07 1.0000e+00 lowCoverage 9.9756e-04 8.0654e-01 lowCoverage 8.7505e-03 1.0000e+00 lowCoverage 0.2583125 1.6849e-02 lowCoverage 1.5179e-01 lowCoverage 0.792361 0.7266272 0.0712437 8 0.830766 0.753038 0.07772829 4.2218e-03 9.9993e-01 weaklyHypermeth 4.6909e-02 1.0000e+00 weaklyHypermeth 3.8046e-02 9.9937e-01 weaklyHypermeth 4.3235e-01 1.0000e+00 insignificant 0.1079644 2.2717e-02 weaklyHypermeth 3.1999e-01 insignificant 0.800929 0.5378947 0.26509978 4 0.785989 0.717206 0.06878351 1.8552e-05 7.2964e-01 lowCoverage 1.4842e-04 1.0000e+00 lowCoverage 1.6695e-02 9.6748e-01 lowCoverage 1.1435e-01 1.0000e+00 lowCoverage 0.2230237 2.8396e-02 lowCoverage 2.2900e-01 lowCoverage 0.800000 0.7257683 0.08981910 4 0.628791 0.677734 -4.8943e-02 2.7971e-02 9.9700e-01 lowCoverage 2.5643e-01 1.000000 lowCoverage 6.1151e-02 0.99755460 lowCoverage 5.9952e-01 1.00000 lowCoverage 0.07267554 1.1579e-01 lowCoverage 1.0000e+00 lowCoverage 0.5378947 0.7263033 -0.1553863 4 0.717206 0.722168 -4.9618e-03 5.5435e-01 1.2608e-01 lowCoverage 1.0000e+00 6.7424e-01 lowCoverage 8.1697e-01 5.0384e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1503481 1.0684e-01 lowCoverage 0.72678367 lowCoverage chr1 7591494 7592494 265 CAMTA1 ENSG00000171735 0.700909 80 5 0.534181 86 5 0.524101 78 5 0.7120000 58 4 0.586818 47 4 0.8273885 149 5 0.5751082 51 5 0.494643 94 5 0.495074 95 5 0.579121 57 4 0.7456856 120 5 0.619091 36 4 0.428543 73 5 0.833333 12 1 0.513691 80 5 0.583333 15 1 0.354167 27 2 0.4971429 35 2 0.494444 53 4 0.5985995 138 5 0.820000 53 5 0.551010 79 5 0.779948 74 5 0.768254 70 4 0.6380952 34 1 0.6311575 126 5 0.431996 91 5 0.6387807 38 4 0.448317 51 4 0.564341 141 5 0.558991 148 5 0.781186 156 5 0.5735741 109 5 0.5952381 54 4 0.6768868 109 2 0.2089377 45 3 0.4697436 94 4 0.5313423 111 5 0.8069444 62 4 0.691572 62 3 0.7166667 18 1 0.4552995 66 4 0.730769 52 3 0.677231 0.486687 0.509970 0.6555556 0.5500842 0.784793 0.5611271 0.4205522 0.4657510 0.5192477 0.7289727 0.5074074 0.3577532 NA 0.3414736 0.36500352 0.266280 0.3029101 0.2808642 0.606290 0.811728 0.5326646 0.783716 0.6809230 0.569224 0.6344856 0.387996 0.6155938 0.385084 0.430820 0.427104 0.769569 0.6667481 0.7894621 0.5331574 0.4178198 0.6339625 0.7401130 0.7754630 0.669104 0.656636 0.3954386 0.638533 1 0.599711 0.635250 -0.04484930 5 0.593627 0.634404 -0.04077693 0.9773264 0.17495402 insignificant 1 1.00000 insignificant 0.9935797 0.0328392 weaklyHypometh 1 1.00000 insignificant -0.04947090 0.3040459 lowCoverage 1 lowCoverage 0.599711 0.5191571 0.0672943 4 0.593627 0.483620 0.11000705 8.4925e-10 1.8336e-01 lowCoverage 8.8464e-09 1.0000e+00 lowCoverage 2.8271e-04 3.7691e-02 lowCoverage 2.9145e-03 1.0000e+00 lowCoverage 0.0755817 3.2915e-01 lowCoverage 1.0000e+00 lowCoverage 0.599711 0.5923077 -0.0756028 3 0.593627 0.678597 -0.08497079 9.9486e-01 3.0366e-02 lowCoverage 1.0000e+00 9.4894e-01 lowCoverage 9.9959e-01 1.2068e-02 lowCoverage 1.0000e+00 7.0987e-01 lowCoverage -0.0953816 1.9756e-01 lowCoverage 1.0000e+00 lowCoverage 0.635250 0.5191571 0.10474745 4 0.634404 0.483620 0.15078398 1.8513e-07 4.4767e-01 lowCoverage 1.9086e-06 1.0000e+00 lowCoverage 1.7875e-03 3.2673e-01 lowCoverage 1.5277e-02 1.0000e+00 lowCoverage 0.1250526 1.3819e-01 lowCoverage 7.7634e-01 lowCoverage 0.635250 0.5923077 -0.02585854 3 0.634404 0.678597 -4.4194e-02 9.4631e-01 2.8288e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5551e-01 0.11827870 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.04591070 5.3406e-01 lowCoverage 1.0000e+00 lowCoverage 0.5191571 0.5923077 -0.0368057 3 0.483620 0.678597 -1.9498e-01 8.1643e-01 2.3463e-05 lowCoverage 1.0000e+00 3.7844e-04 lowCoverage 5.4017e-01 1.1357e-02 lowCoverage 1.0000e+00 1.1677e-01 lowCoverage -0.1709633 8.7056e-02 lowCoverage 0.63573638 lowCoverage chr1 7612693 7613693 271 CAMTA1 ENSG00000171735 0.925457 222 6 0.822889 129 7 0.770198 126 7 0.8766304 104 6 0.866667 58 5 0.8091258 222 6 0.8641149 135 6 0.892857 98 6 0.935225 90 5 0.978472 68 5 0.9402229 182 7 0.918485 93 5 0.950189 127 5 0.000000 2 0 0.785346 91 5 0.870370 40 5 0.870223 118 5 0.7424804 155 5 0.880307 96 5 0.8374766 212 5 0.911510 77 5 0.682209 76 5 0.697050 212 8 0.910635 105 7 0.9666667 45 5 0.9364700 114 6 0.961948 113 6 0.7832498 105 5 0.946877 65 5 0.892141 114 6 0.762769 154 7 0.952157 276 6 0.7344372 100 6 0.4500086 118 6 0.6666667 26 1 0.6750376 86 5 0.7692185 87 7 0.4864370 141 6 0.7051112 227 7 0.778877 272 6 0.8515625 64 5 0.9260368 248 5 0.659455 185 7 0.920491 0.817040 0.760210 0.9680670 0.8751055 0.912619 0.9134465 0.9641350 0.9195952 0.9735232 0.9568998 0.9015890 0.9398830 NA 0.9401706 0.84692921 0.866936 0.8855824 0.8557300 0.904494 0.939676 0.8135534 0.923522 0.9172296 0.956962 0.9411627 0.952504 0.9408088 0.925022 0.949603 0.910965 0.944669 0.7828612 0.4993787 0.7522303 0.6689604 0.8516181 0.6437318 0.9010811 0.945185 0.963608 0.8965549 0.866297 5 0.891470 0.907089 -0.02101393 5 0.826371 0.869003 -0.04263237 0.9978374 0.17858395 insignificant 1 1.00000 insignificant 0.9962876 0.2796227 insignificant 1 1.00000 insignificant -0.04013669 0.4708304 insignificant 1 insignificant 0.892933 0.6193896 0.2501246 5 0.883314 0.584630 0.29868378 1.0521e-14 1.0000e+00 hypermethylated 1.5030e-13 1.0000e+00 hypermethylated 3.9328e-06 1.0000e+00 hypermethylated 6.2425e-05 1.0000e+00 hypermethylated 0.1965359 1.5400e-02 weaklyHypermeth 1.4392e-01 insignificant 0.891194 0.8574297 0.0166590 5 0.791645 0.711693 0.07995191 4.9385e-02 7.0968e-01 weaklyHypermeth 4.3320e-01 1.0000e+00 insignificant 6.3666e-01 6.8997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0426285 5.3284e-01 insignificant 1.0000e+00 insignificant 0.907777 0.6200717 0.27524581 6 0.896781 0.619244 0.27753695 3.1891e-11 1.0000e+00 hypermethylated 4.8320e-10 1.0000e+00 hypermethylated 1.1837e-04 1.0000e+00 hypermethylated 1.5575e-03 1.0000e+00 hypermethylated 0.2366726 4.6380e-03 weaklyHypermeth 5.7975e-02 weaklyHypermeth 0.906961 0.8574297 0.04538008 6 0.842804 0.711693 1.3111e-01 2.6135e-02 9.5417e-01 weaklyHypermeth 2.4613e-01 1.000000 insignificant 4.0973e-01 0.90605477 insignificant 1.0000e+00 1.00000 insignificant 0.08276517 1.8787e-01 insignificant 1.0000e+00 insignificant 0.6184448 0.8582915 -0.2138568 6 0.547881 0.790770 -2.4289e-01 9.9960e-01 2.9838e-05 hypomethylated 1.0000e+00 4.4535e-04 hypomethylated 9.9940e-01 1.0619e-02 weaklyHypometh 1.0000e+00 1.1178e-01 insignificant -0.1539075 6.1875e-02 insignificant 0.51562704 insignificant chr1 8356071 8357071 291 ENSG00000206757 0.553029 345 7 0.639703 196 7 0.703627 160 7 0.5989871 334 6 0.606954 122 7 0.7479119 285 7 0.6628255 176 7 0.701654 120 7 0.740709 128 5 0.777882 87 5 0.7211575 241 7 0.673039 87 5 0.618884 152 5 0.250000 8 0 0.552552 129 7 0.542994 75 5 0.806591 83 5 0.3464973 391 7 0.746270 123 7 0.5270505 258 7 0.911640 79 5 0.516190 48 4 0.591432 162 7 0.642489 101 7 0.5730734 97 6 0.5475867 219 7 0.739744 93 5 0.8592230 96 5 0.595842 160 7 0.665259 209 7 0.615687 220 7 0.810510 363 7 0.0043290 228 7 0.0369748 126 7 0.0489130 234 4 0.0173913 47 5 0.0089286 118 7 0.0033223 263 7 0.1883959 298 7 0.220606 317 7 0.2614949 278 6 0.2402910 159 7 0.164593 373 7 0.654721 0.612227 0.678524 0.6088140 0.6055676 0.716255 0.6486399 0.6827008 0.7851553 0.6752257 0.7121731 0.7573042 0.4883092 0.593722 0.5418468 0.77858449 0.762197 0.4024850 0.6999931 0.594167 0.828730 0.3393914 0.642496 0.6500603 0.640984 0.5381748 0.639446 0.8593057 0.563060 0.677364 0.714470 0.827292 0.0051553 0.0141567 0.0628461 0.0237321 0.0012967 0.0069478 0.1988911 0.226700 0.268948 0.2842869 0.182575 4 0.641326 0.688009 -0.05602501 7 0.574948 0.596686 -0.02173753 0.9949636 0.02537791 weaklyHypometh 1 0.98514 insignificant 0.9293604 0.2865016 insignificant 1 1.00000 insignificant -0.04647372 0.3475366 insignificant 1 insignificant 0.641774 0.0255906 0.6231923 7 0.621369 0.018681 0.60268822 4.1877e-47 1.0000e+00 hypermethylated 3.8070e-45 1.0000e+00 hypermethylated 1.4890e-16 1.0000e+00 hypermethylated 1.8613e-14 1.0000e+00 hypermethylated 0.6059394 1.1441e-14 hypermethylated 1.4301e-12 hypermethylated 0.641774 0.2329825 0.4149849 7 0.621369 0.203005 0.41836380 1.0038e-27 1.0000e+00 hypermethylated 5.0190e-25 1.0000e+00 hypermethylated 1.8057e-14 1.0000e+00 hypermethylated 4.5142e-12 1.0000e+00 hypermethylated 0.4108397 7.4829e-11 hypermethylated 7.4829e-08 hypermethylated 0.688382 0.0255906 0.66987304 7 0.681926 0.018681 0.66324540 1.4743e-42 1.0000e+00 hypermethylated 1.3403e-40 1.0000e+00 hypermethylated 1.7253e-14 1.0000e+00 hypermethylated 2.1566e-12 1.0000e+00 hypermethylated 0.6524132 8.9083e-10 hypermethylated 8.9083e-08 hypermethylated 0.688382 0.2329825 0.47031327 7 0.681926 0.203005 4.7892e-01 4.7528e-29 1.0000e+00 hypermethylated 1.5843e-26 1.000000 hypermethylated 5.2316e-13 1.00000000 hypermethylated 2.6158e-10 1.00000 hypermethylated 0.45731345 1.7377e-08 hypermethylated 1.7377e-05 hypermethylated 0.0255906 0.2329825 -0.2147946 7 0.018681 0.203005 -1.8432e-01 1.0000e+00 5.9796e-16 hypomethylated 1.0000e+00 3.5174e-14 hypomethylated 1.0000e+00 1.4431e-08 hypomethylated 1.0000e+00 1.3287e-06 hypomethylated -0.1950997 8.3051e-05 weaklyHypometh 0.00536894 weaklyHypometh chr1 9264447 9265447 338 ENSG00000223319 0.792942 197 5 0.655401 127 6 0.711162 75 6 0.9012192 138 6 0.832540 53 6 0.8647612 253 6 0.6803922 73 6 0.712857 108 5 0.869745 67 5 0.785614 41 5 0.8240625 173 5 0.765306 22 2 0.724109 75 5 0.476190 19 1 0.842857 64 5 0.760000 13 1 0.550000 20 2 0.4976552 321 6 0.640351 161 6 0.7252882 174 6 0.899510 62 6 0.634454 55 5 0.778912 108 6 0.874074 34 4 0.7038474 254 6 0.8134835 179 6 0.832567 62 4 0.7937500 35 4 0.690508 117 5 0.710591 186 6 0.773631 162 6 0.879001 206 6 0.1295567 170 6 0.1120871 142 5 0.0000000 174 4 0.0086207 253 6 0.2207657 154 7 0.0450622 242 6 0.5613953 154 5 0.430141 190 6 0.5110371 177 6 0.3356527 212 6 0.545220 158 6 0.775073 0.635853 0.698405 0.8710559 0.7796081 0.839605 0.5733568 0.6740864 0.8267432 0.7982250 0.8103602 0.6965670 0.7365328 0.605429 0.7170543 0.69612403 0.668773 0.4818920 0.6568407 0.713209 0.842681 0.5951892 0.752787 0.8165375 0.706835 0.8082883 0.747460 0.8527132 0.646447 0.783002 0.779091 0.815825 0.0797971 0.1048432 0.0188964 0.0100241 0.1149576 0.0326789 0.5193650 0.380544 0.492079 0.3036773 0.537784 2 0.730451 0.786986 -0.05084700 6 0.724010 0.742804 -0.01879441 0.9536682 0.05844364 insignificant 1 1.00000 insignificant 0.9659357 0.0450030 weaklyHypometh 1 1.00000 insignificant -0.05140473 0.1657768 lowCoverage 1 lowCoverage 0.730663 0.0713656 0.6621054 6 0.756011 0.143054 0.61295740 1.3538e-46 1.0000e+00 hypermethylated 1.1282e-44 1.0000e+00 hypermethylated 2.7421e-15 1.0000e+00 hypermethylated 1.7138e-13 1.0000e+00 hypermethylated 0.6446073 6.0502e-09 lowCoverage 3.0251e-07 lowCoverage 0.728751 0.4837262 0.2515107 6 0.724118 0.471645 0.25247316 4.2553e-13 1.0000e+00 hypermethylated 2.0263e-11 1.0000e+00 hypermethylated 1.6677e-08 1.0000e+00 hypermethylated 1.0423e-06 1.0000e+00 hypermethylated 0.2539335 1.0429e-03 lowCoverage 4.0110e-02 lowCoverage 0.787380 0.0713656 0.71975866 6 0.777491 0.143054 0.63443673 8.0603e-49 1.0000e+00 hypermethylated 8.6499e-47 1.0000e+00 hypermethylated 1.2068e-13 1.0000e+00 hypermethylated 1.3409e-11 1.0000e+00 hypermethylated 0.6960120 1.4030e-08 hypermethylated 9.3536e-07 hypermethylated 0.787586 0.4837262 0.30306038 6 0.782072 0.471645 3.1043e-01 6.1351e-19 1.0000e+00 hypermethylated 1.0225e-16 1.000000 hypermethylated 3.2130e-11 1.00000000 hypermethylated 4.0163e-09 1.00000 hypermethylated 0.30533822 4.4283e-04 hypermethylated 2.2142e-02 hypermethylated 0.0674357 0.4837262 -0.4207883 6 0.062729 0.471645 -4.0892e-01 1.0000e+00 4.4556e-18 hypomethylated 1.0000e+00 3.7130e-16 hypomethylated 1.0000e+00 8.1761e-09 hypomethylated 1.0000e+00 1.0220e-06 hypomethylated -0.3906738 8.0158e-05 hypomethylated 0.00536894 hypomethylated chr1 9699876 9700876 345 PIK3CD ENSG00000171608 0.638095 93 5 0.519318 56 6 0.492836 63 4 0.5921741 146 6 0.525000 37 4 0.6619133 121 6 0.5694444 60 6 0.672702 76 6 0.729847 60 6 0.670635 52 5 0.7589393 146 6 0.432540 28 2 0.524716 123 5 0.716146 52 5 0.585024 84 5 0.333333 10 0 0.232143 19 2 0.4747357 152 6 0.637307 87 6 0.6095976 104 6 0.791026 58 6 0.466799 126 6 0.738645 71 5 0.469841 18 3 0.6369796 180 5 0.6815499 138 6 0.586569 83 6 0.5586081 43 3 0.604293 83 6 0.694857 162 6 0.536499 137 6 0.648297 137 6 0.3639508 104 6 0.6138716 67 5 0.5000000 69 2 0.3181818 44 3 0.8056794 76 6 0.2093768 163 6 0.5111511 110 5 0.555798 140 5 0.3576167 144 5 0.3874339 75 5 0.623179 144 6 0.549020 0.479880 0.490807 0.5050427 0.3161765 0.421595 0.5506536 0.6823139 0.6040441 0.5903361 0.7743135 0.3527077 0.4265744 0.566912 0.5778062 0.36896868 0.383675 0.4610078 0.5921692 0.522541 0.786425 0.3866636 0.682233 0.4813025 0.656915 0.6660729 0.593873 0.3318609 0.693004 0.571264 0.537707 0.643517 0.3970359 0.5582755 0.3981229 0.2630365 0.7170951 0.1709926 0.4429064 0.527360 0.314677 0.3684641 0.464087 2 0.547085 0.610706 -0.05399108 6 0.645823 0.689318 -0.04349522 0.9979477 0.13923981 insignificant 1 1.00000 insignificant 0.9998018 0.0642426 insignificant 1 1.00000 insignificant -0.04900795 0.2480522 lowCoverage 1 lowCoverage 0.547375 0.4061303 0.2022675 6 0.645823 0.466637 0.17918597 5.0695e-06 9.9784e-01 hypermethylated 3.8405e-05 1.0000e+00 hypermethylated 2.2052e-01 7.9393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1003123 3.2407e-01 lowCoverage 1.0000e+00 lowCoverage 0.546795 0.4428105 0.1206679 5 0.586793 0.538933 0.04786040 3.0228e-03 4.5962e-01 weaklyHypermeth 3.5986e-02 1.0000e+00 weaklyHypermeth 2.0946e-02 6.6679e-01 weaklyHypermeth 2.5860e-01 1.0000e+00 insignificant 0.0817866 2.0324e-01 lowCoverage 1.0000e+00 lowCoverage 0.609400 0.4042146 0.25355819 6 0.546461 0.323780 0.22268120 1.4774e-06 9.9953e-01 hypermethylated 1.3055e-05 1.0000e+00 hypermethylated 1.0625e-01 9.7465e-01 insignificant 5.5054e-01 1.0000e+00 insignificant 0.1493203 1.6032e-01 lowCoverage 8.5734e-01 lowCoverage 0.609895 0.4420881 0.16733936 5 0.546461 0.461942 8.4518e-02 4.3292e-03 7.2738e-01 weaklyHypermeth 5.1539e-02 1.000000 weaklyHypermeth 2.1146e-03 0.99481459 weaklyHypermeth 3.9315e-02 1.00000 weaklyHypermeth 0.13079453 5.9818e-02 insignificant 6.4085e-01 insignificant 0.4049904 0.4428105 -0.0645657 5 0.377743 0.538933 -1.6119e-01 9.4418e-01 2.0548e-02 weaklyHypometh 1.0000e+00 1.4677e-01 insignificant 6.1121e-01 5.6616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0185257 8.6058e-01 lowCoverage 1.00000000 lowCoverage chr1 9826763 9827763 347 CLSTN1 ENSG00000171603 0.775953 241 6 0.825597 294 6 0.763696 174 6 0.6571332 233 6 0.512491 122 6 0.8865666 402 7 0.6879318 215 7 0.766538 255 6 0.651661 137 6 0.760448 108 7 0.8660885 391 6 0.676696 58 6 0.748372 185 6 0.912775 81 5 0.863093 128 6 0.559722 55 5 0.100000 15 0 0.8544309 226 5 0.873572 378 6 0.8869725 355 7 0.741655 164 7 0.880457 109 5 0.798874 134 5 0.852406 159 7 0.9122024 61 5 0.7772075 419 6 0.830375 200 6 0.8390600 72 6 0.789816 265 6 0.928258 405 6 0.885394 388 6 0.903039 353 6 0.2568190 228 6 0.2980280 182 6 0.3671090 317 5 0.5696970 41 2 0.2413027 223 7 0.3030205 457 6 0.7667099 224 5 0.892165 259 5 0.8809524 143 5 0.8167458 191 4 0.838235 188 5 0.844067 0.831985 0.824412 0.8913943 0.8081902 0.918564 0.8150202 0.9079158 0.8499897 0.8730664 0.8956348 0.8079355 0.8991806 0.913928 0.8913801 0.77363195 0.374441 0.8583475 0.8824007 0.914555 0.870450 0.9197019 0.858146 0.9011981 0.940438 0.9138274 0.817388 0.9423009 0.797172 0.932873 0.879160 0.906333 0.2637825 0.1816553 0.3196176 0.5750501 0.2416716 0.2892189 0.8183924 0.902258 0.902838 0.9174835 0.825987 4 0.873827 0.885913 -0.01605685 6 0.769964 0.838536 -0.06857212 0.9012852 0.02999328 weaklyHypometh 1 0.98514 insignificant 0.9981986 0.0016084 weaklyHypometh 1 0.45542 insignificant -0.11340859 0.0185896 weaklyHypometh 1 insignificant 0.873827 0.3059392 0.5893925 6 0.769964 0.301760 0.46820353 2.7608e-44 9.9999e-01 hypermethylated 1.5338e-42 1.0000e+00 hypermethylated 6.3267e-09 9.9751e-01 hypermethylated 1.5952e-07 1.0000e+00 hypermethylated 0.3921575 4.1058e-05 hypermethylated 1.2624e-03 hypermethylated 0.873180 0.8774900 0.0059521 5 0.538975 0.867169 -0.32819476 1.1252e-01 3.0620e-01 insignificant 8.7224e-01 1.0000e+00 insignificant 7.9866e-01 2.1449e-02 inconclusive 1.0000e+00 9.4061e-01 insignificant -0.1074746 3.3400e-02 lowCoverage 4.2821e-01 lowCoverage 0.885913 0.3059392 0.59995168 6 0.838536 0.301760 0.53677565 1.1950e-33 1.0000e+00 hypermethylated 7.0292e-32 1.0000e+00 hypermethylated 9.6147e-11 1.0000e+00 hypermethylated 4.5784e-09 1.0000e+00 hypermethylated 0.5055661 5.6146e-05 hypermethylated 1.6513e-03 hypermethylated 0.885306 0.8772455 0.02447017 5 0.775385 0.833962 -5.8576e-02 5.9669e-02 4.5061e-01 insignificant 4.8909e-01 1.000000 insignificant 3.6162e-01 0.49096249 insignificant 1.0000e+00 1.00000 insignificant 0.00593401 8.3928e-01 lowCoverage 1.0000e+00 lowCoverage 0.3059392 0.8771229 -0.5944729 5 0.301760 0.810242 -5.0848e-01 1.0000e+00 2.0325e-16 hypomethylated 1.0000e+00 1.3550e-14 hypomethylated 1.0000e+00 3.9315e-06 hypomethylated 1.0000e+00 1.6052e-04 hypomethylated -0.4996321 3.9157e-05 lowCoverage 0.00355970 lowCoverage chr1 10608285 10609285 403 ENSG00000209421 0.855839 260 5 0.853265 209 5 0.674976 124 3 0.8817857 186 5 0.660513 45 3 0.8852744 248 5 0.7063403 65 4 0.850127 162 5 0.797122 123 5 0.908868 87 5 0.9133737 159 5 0.452941 38 2 0.948587 232 5 0.844444 21 1 0.850972 140 5 0.550000 13 1 0.785556 38 3 0.6962857 257 5 0.928086 123 5 0.8805852 215 5 0.863763 70 5 0.841778 133 5 0.897479 131 5 0.557331 56 3 0.8567460 95 5 0.8849935 260 5 0.883977 105 5 0.8155556 30 3 0.951092 206 5 0.913468 278 5 0.921794 259 5 0.888238 266 5 0.0984135 245 5 0.2476217 124 5 0.0813793 180 5 0.1005981 52 5 0.2118886 101 5 0.1768830 230 5 0.9432827 150 5 0.666383 211 5 0.6929947 145 5 0.7347530 185 5 0.796717 228 5 0.865042 0.832168 0.712466 0.8922525 0.7343860 0.894477 0.7977990 0.8457204 0.7984244 0.9001076 0.8798120 0.5026316 0.9392492 0.841209 0.8427908 0.54054088 0.759912 0.7441167 0.9256431 0.880313 0.884700 0.8074459 0.882149 0.7507222 0.853972 0.8998042 0.897448 0.8147368 0.920044 0.928518 0.938843 0.907006 0.0906164 0.2222110 0.1429764 0.1285035 0.2399618 0.1673021 0.9202417 0.675272 0.655701 0.7271292 0.867411 3 0.845902 0.899947 -0.05426584 5 0.841008 0.891805 -0.05079610 0.9989341 0.00150017 weaklyHypometh 1 0.26922 insignificant 0.9879930 0.0079892 weaklyHypometh 1 0.79892 insignificant -0.06010424 0.1593959 lowCoverage 1 lowCoverage 0.845902 0.1416309 0.6961282 5 0.841008 0.136041 0.70496706 1.7091e-57 1.0000e+00 hypermethylated 2.1363e-55 1.0000e+00 hypermethylated 2.3058e-15 1.0000e+00 hypermethylated 1.5372e-13 1.0000e+00 hypermethylated 0.6434496 1.7948e-11 lowCoverage 1.1218e-09 lowCoverage 0.845902 0.7812840 0.0728846 5 0.841008 0.750441 0.09056696 3.5681e-03 9.9979e-01 weaklyHypermeth 4.1490e-02 1.0000e+00 weaklyHypermeth 2.0551e-01 9.7346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0294208 6.2432e-01 lowCoverage 1.0000e+00 lowCoverage 0.899947 0.1416309 0.75062706 5 0.891805 0.136041 0.75576316 1.8068e-51 1.0000e+00 hypermethylated 3.0113e-49 1.0000e+00 hypermethylated 2.2780e-13 1.0000e+00 hypermethylated 2.0709e-11 1.0000e+00 hypermethylated 0.7035538 6.6521e-11 lowCoverage 1.1087e-08 lowCoverage 0.899947 0.7812840 0.12591807 5 0.891805 0.750441 1.4136e-01 3.2208e-06 1.0000e+00 weaklyHypermeth 7.0018e-05 1.000000 weaklyHypermeth 5.4411e-03 0.99980981 weaklyHypermeth 8.3710e-02 1.00000 weaklyHypermeth 0.08952507 1.6211e-01 lowCoverage 1.0000e+00 lowCoverage 0.1416309 0.7812840 -0.6206325 5 0.136041 0.750441 -6.1440e-01 1.0000e+00 9.4038e-21 hypomethylated 1.0000e+00 1.1755e-18 hypomethylated 1.0000e+00 5.0217e-09 hypomethylated 1.0000e+00 8.3695e-07 hypomethylated -0.6140288 2.1762e-05 hypomethylated 0.00355970 hypomethylated chr1 10642919 10643919 406 ENSG00000209421 0.914668 184 9 0.776056 171 8 0.864004 100 8 0.8874518 172 6 0.944444 59 2 0.9343434 188 8 0.9578804 70 4 0.932230 183 8 0.848293 87 8 0.870833 101 5 0.7347930 225 8 0.845833 42 5 0.922552 245 8 0.905714 74 5 0.814509 67 8 0.726190 36 4 0.750000 12 2 0.8666468 169 8 0.930373 166 9 0.9303222 175 7 0.937500 63 8 0.873287 68 8 0.988848 121 4 0.875000 45 5 0.9482143 84 8 0.9452178 215 9 0.878280 88 7 0.7514286 26 3 0.748349 107 8 0.913051 185 9 0.920985 202 9 0.954113 216 9 0.7556548 92 5 0.8505123 119 8 0.6678877 187 7 0.7911111 74 4 0.7663540 60 7 0.8601888 157 9 0.8716779 163 6 0.917436 222 8 0.6988976 105 5 0.7330842 149 5 0.973752 175 6 0.889849 0.853420 0.823398 0.9301406 0.9624413 0.968918 0.9337110 0.9257265 0.9066690 0.9375587 0.9442261 0.8046948 0.9244903 0.922364 0.9169391 0.75779304 0.951502 0.9215376 0.9297366 0.930701 0.908451 0.8579038 0.976631 0.9647887 0.936217 0.9263330 0.798179 0.7628628 0.914233 0.939381 0.922775 0.956382 0.6588699 0.8444726 0.8289738 0.7754304 0.7872081 0.7388057 0.9524013 0.925922 0.856207 0.8538028 0.947427 4 0.903800 0.930986 -0.03153232 8 0.797940 0.867487 -0.06954662 0.9939664 0.00778751 weaklyHypometh 1 0.54999 insignificant 0.9988132 0.0119067 weaklyHypometh 1 0.97988 insignificant -0.02666579 0.3402564 insignificant 1 insignificant 0.904120 0.8008721 0.1009704 8 0.825026 0.753030 0.07199589 1.2479e-04 4.1041e-01 weaklyHypermeth 8.1030e-04 1.0000e+00 weaklyHypermeth 1.6574e-01 4.6665e-01 insignificant 8.2048e-01 1.0000e+00 insignificant 0.0859055 3.0253e-02 weaklyHypermeth 2.3635e-01 insignificant 0.904158 0.9226044 -0.0026926 5 0.870480 0.869860 0.00062032 5.9022e-01 2.8326e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7378e-01 5.9298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0288873 6.2575e-01 insignificant 1.0000e+00 insignificant 0.931594 0.8008721 0.12751168 9 0.900895 0.753030 0.14786493 7.0238e-04 8.9629e-01 weaklyHypermeth 4.6210e-03 1.0000e+00 weaklyHypermeth 1.0103e-01 9.8047e-01 insignificant 5.3175e-01 1.0000e+00 insignificant 0.1125713 1.0099e-02 weaklyHypermeth 1.0977e-01 insignificant 0.931546 0.9226044 0.01245405 6 0.885743 0.869860 1.5883e-02 2.7952e-01 6.3674e-01 insignificant 1.0000e+00 1.000000 insignificant 3.7165e-01 0.94806717 insignificant 1.0000e+00 1.00000 insignificant 0.05555314 3.7416e-01 insignificant 1.0000e+00 insignificant 0.8020378 0.9224138 -0.1356264 6 0.828333 0.856846 -2.8513e-02 7.4213e-01 5.0547e-02 insignificant 1.0000e+00 3.0635e-01 insignificant 8.4508e-01 5.3682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0570182 3.7959e-01 insignificant 1.00000000 insignificant chr1 10649870 10650870 408 ENSG00000209421 0.574917 349 14 0.664824 329 16 0.665583 230 11 0.5817143 444 14 0.777188 161 12 0.8226221 316 16 0.6178122 103 8 0.610088 267 14 0.603021 240 16 0.826140 296 16 0.7697828 449 18 0.741645 165 13 0.560776 460 16 0.769670 160 9 0.516002 286 16 0.773469 92 7 0.262236 93 5 0.4231737 441 13 0.775685 207 14 0.5495658 247 15 0.768871 116 11 0.223458 368 16 0.713257 179 10 0.685515 141 11 0.6427085 353 14 0.7176543 433 16 0.661733 230 16 0.6748553 129 10 0.521768 165 11 0.485048 470 16 0.450522 397 15 0.850499 524 16 0.2854319 333 16 0.3469992 314 15 0.2955463 401 12 0.6160310 126 10 0.3215674 278 16 0.4569895 507 15 0.3575577 560 15 0.414827 449 14 0.1988428 296 10 0.2147636 415 14 0.361473 348 12 0.515645 0.531532 0.627255 0.4626198 0.6442571 0.759854 0.7095011 0.6398000 0.5835285 0.7202080 0.7331069 0.6692829 0.4139796 0.631682 0.4629564 0.57532751 0.321655 0.3685080 0.6338945 0.430737 0.770081 0.1157600 0.710519 0.7363173 0.605077 0.6525822 0.675726 0.7247878 0.494391 0.406068 0.326145 0.803765 0.2435254 0.3137017 0.2443810 0.4018400 0.4147263 0.2903121 0.2138567 0.254794 0.201003 0.1809764 0.226517 5 0.587816 0.610842 0.00597159 16 0.588226 0.561575 0.02665075 0.4488955 0.91917778 insignificant 1 1.00000 insignificant 0.5954521 0.9259841 insignificant 1 1.00000 insignificant 0.02797165 0.6388065 insignificant 1 insignificant 0.588158 0.3741705 0.2616022 16 0.617789 0.305353 0.31243639 4.0012e-31 1.0000e+00 hypermethylated 1.6672e-29 1.0000e+00 hypermethylated 4.4435e-14 1.0000e+00 hypermethylated 2.4686e-12 1.0000e+00 hypermethylated 0.2572016 2.2411e-03 weaklyHypermeth 3.2957e-02 weaklyHypermeth 0.588058 0.2219536 0.3042109 14 0.618844 0.333130 0.28571365 2.3823e-28 1.0000e+00 hypermethylated 2.3823e-25 1.0000e+00 hypermethylated 8.0427e-21 1.0000e+00 hypermethylated 8.0427e-18 1.0000e+00 hypermethylated 0.3348030 1.4820e-04 hypermethylated 9.2624e-03 hypermethylated 0.611032 0.3741705 0.24599566 16 0.585123 0.305353 0.27977049 5.6303e-16 9.9916e-01 hypermethylated 1.3405e-14 1.0000e+00 hypermethylated 3.8877e-10 9.9986e-01 hypermethylated 1.6199e-08 1.0000e+00 hypermethylated 0.2292300 6.9239e-03 weaklyHypermeth 8.1458e-02 weaklyHypermeth 0.611222 0.2219536 0.30479477 14 0.598564 0.333130 2.6543e-01 1.4868e-12 1.0000e+00 hypermethylated 1.0620e-10 1.000000 hypermethylated 9.6134e-11 0.99999999 hypermethylated 9.6134e-09 1.00000 hypermethylated 0.30683133 4.1241e-04 hypermethylated 2.1706e-02 hypermethylated 0.3751279 0.2219536 0.0192790 14 0.353567 0.333130 2.0436e-02 7.2556e-04 2.7052e-02 weaklyHypermeth 5.5812e-02 1.8786e-01 weaklyHypermeth 6.3619e-03 7.6548e-01 weaklyHypermeth 5.5366e-01 1.0000e+00 insignificant 0.0776014 2.8208e-01 insignificant 1.00000000 insignificant chr1 10664088 10665088 411 ENSG00000209421 0.685391 405 7 0.664500 291 7 0.572571 341 8 0.6987356 471 7 0.614080 195 8 0.8086302 467 8 0.7186947 270 7 0.614966 366 8 0.602308 400 8 0.796220 397 8 0.7970710 364 8 0.740971 225 7 0.332495 500 8 0.637325 332 6 0.529478 471 7 0.752874 221 6 0.644431 431 5 0.4899071 656 7 0.576411 263 7 0.6357622 334 8 0.755449 112 8 0.365877 165 8 0.750697 321 7 0.726906 171 8 0.7538440 116 6 0.6428020 543 7 0.678793 307 8 0.7475458 224 6 0.742233 263 7 0.474620 532 8 0.613713 413 8 0.865605 449 8 0.5667850 245 8 0.6462623 216 6 0.8963585 131 4 0.3136054 71 5 0.7073056 198 8 0.4876301 366 7 0.3952898 414 6 0.565154 480 6 0.5517850 487 6 0.3286677 410 7 0.484327 316 7 0.694111 0.604880 0.599960 0.6638545 0.6315381 0.767292 0.7402760 0.5780060 0.5917863 0.7817309 0.7854059 0.7078033 0.2971920 0.633960 0.4976000 0.81951521 0.535479 0.5362050 0.5842455 0.586541 0.678646 0.4014370 0.666070 0.7128616 0.750395 0.5896786 0.718163 0.7302282 0.740215 0.448451 0.569792 0.854455 0.5323925 0.5195921 0.9324642 0.1879692 0.5994203 0.2920002 0.4373534 0.463001 0.449538 0.4546655 0.413003 5 0.611216 0.620299 -0.01918421 7 0.637700 0.660672 -0.02297270 0.8677765 0.38376852 insignificant 1 1.00000 insignificant 0.9456377 0.2135963 insignificant 1 1.00000 insignificant -0.03086600 0.5215449 insignificant 1 insignificant 0.611216 0.5436023 0.0575218 7 0.637700 0.592981 0.04471868 5.0593e-02 5.9614e-01 insignificant 2.4441e-01 1.0000e+00 insignificant 9.3116e-02 5.2418e-01 insignificant 5.0333e-01 1.0000e+00 insignificant 0.0426499 6.3387e-01 insignificant 1.0000e+00 insignificant 0.611216 0.4380636 0.1765603 6 0.637700 0.437130 0.20056964 1.9579e-09 1.0000e+00 weaklyHypermeth 6.5264e-08 1.0000e+00 weaklyHypermeth 4.3006e-08 9.9946e-01 weaklyHypermeth 2.1503e-06 1.0000e+00 weaklyHypermeth 0.1805964 1.1039e-02 weaklyHypermeth 2.0145e-01 insignificant 0.620299 0.5436023 0.07393036 7 0.660672 0.592981 0.06769138 2.8063e-02 6.3870e-01 weaklyHypermeth 1.4245e-01 1.0000e+00 insignificant 1.0059e-01 6.4666e-01 insignificant 5.3175e-01 1.0000e+00 insignificant 0.0735159 4.4049e-01 insignificant 1.0000e+00 insignificant 0.620299 0.4380636 0.21387378 6 0.660672 0.437130 2.2354e-01 2.3360e-09 1.0000e+00 hypermethylated 1.0618e-07 1.000000 hypermethylated 1.7163e-07 0.99993156 hypermethylated 1.0727e-05 1.00000 hypermethylated 0.21146236 5.4896e-03 weaklyHypermeth 1.4744e-01 insignificant 0.5436023 0.4380636 0.1104315 6 0.592981 0.437130 1.5585e-01 6.4956e-05 9.5918e-01 weaklyHypermeth 1.0826e-02 1.0000e+00 weaklyHypermeth 3.7301e-02 8.4578e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1379465 1.7762e-01 insignificant 1.00000000 insignificant chr1 10664759 10665759 412 ENSG00000209421 0.743815 362 6 0.608222 273 6 0.601812 318 6 0.6784424 441 6 0.501580 188 6 0.7679884 421 6 0.7016492 260 6 0.725558 344 6 0.637161 378 6 0.769961 379 6 0.8408498 329 6 0.682405 218 6 0.394280 471 6 0.637325 332 6 0.438451 461 6 0.877874 217 6 0.602203 424 4 0.5297527 628 6 0.574104 246 6 0.5868428 287 6 0.615954 96 6 0.376724 147 6 0.752350 297 6 0.583130 152 6 0.7845371 97 5 0.4905832 517 6 0.643153 272 6 0.6850458 218 6 0.730040 232 6 0.484017 496 6 0.603998 380 6 0.859268 380 6 0.5473801 221 6 0.6048498 197 5 0.9901961 130 5 0.2825397 62 4 0.5404922 186 6 0.3406496 348 6 0.3968148 388 5 0.517427 430 5 0.5330107 449 5 0.4083090 370 6 0.424945 297 6 0.698180 0.586425 0.611705 0.6583017 0.6241941 0.760935 0.7471586 0.5691247 0.5850748 0.7751523 0.7792531 0.6994713 0.2870757 0.628442 0.4899213 0.81876423 0.514763 0.5317986 0.5812757 0.577731 0.661181 0.3990997 0.659737 0.7020872 0.749351 0.5805881 0.717080 0.7291536 0.733905 0.450502 0.566684 0.856996 0.5228305 0.5003639 0.9348325 0.1664821 0.5833109 0.2599919 0.4437035 0.460235 0.455119 0.4712466 0.408274 5 0.604558 0.608100 -0.01956497 6 0.650816 0.598685 0.05213081 0.6541868 0.66036472 insignificant 1 1.00000 insignificant 0.8657923 0.6610475 insignificant 1 1.00000 insignificant 0.01094701 0.8250838 insignificant 1 insignificant 0.604334 0.5270979 0.0665616 6 0.634946 0.634047 0.00089887 3.7576e-02 7.5112e-01 weaklyHypermeth 1.8556e-01 1.0000e+00 insignificant 5.2884e-02 8.5449e-01 insignificant 2.9878e-01 1.0000e+00 insignificant 0.0939959 4.0977e-01 insignificant 1.0000e+00 insignificant 0.604277 0.4482937 0.1635413 5 0.640335 0.409121 0.23121362 2.7162e-06 1.0000e+00 weaklyHypermeth 6.3168e-05 1.0000e+00 weaklyHypermeth 4.7872e-07 1.0000e+00 weaklyHypermeth 1.9149e-05 1.0000e+00 weaklyHypermeth 0.1889124 4.2146e-04 weaklyHypermeth 2.1073e-02 weaklyHypermeth 0.608112 0.5270979 0.08207769 6 0.598521 0.634047 -0.03552607 3.3525e-02 8.8498e-01 weaklyHypermeth 1.6679e-01 1.0000e+00 insignificant 7.6610e-02 7.6413e-01 insignificant 4.2093e-01 1.0000e+00 insignificant 0.0830489 4.7489e-01 insignificant 1.0000e+00 insignificant 0.608298 0.4482937 0.19443225 5 0.626881 0.409121 2.1776e-01 1.4831e-06 1.0000e+00 weaklyHypermeth 3.5312e-05 1.000000 weaklyHypermeth 7.3976e-06 0.99995632 weaklyHypermeth 2.4659e-04 1.00000 weaklyHypermeth 0.17796539 2.6734e-03 weaklyHypermeth 8.9115e-02 weaklyHypermeth 0.5250660 0.4487047 0.0848840 5 0.539840 0.435641 1.0420e-01 1.0554e-02 8.7064e-01 weaklyHypermeth 4.5885e-01 1.0000e+00 insignificant 3.6264e-01 6.3919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0949165 4.0620e-01 insignificant 1.00000000 insignificant chr1 10667554 10668554 414 ENSG00000209421 0.813203 73 5 0.840291 116 5 0.879716 77 5 0.9174770 68 5 0.766667 56 3 0.8621866 119 7 0.8065476 87 3 0.858860 64 5 0.688081 62 3 0.853587 74 3 0.8547945 148 7 0.848273 67 5 0.716396 95 5 0.733333 13 0 0.743154 101 3 0.924868 71 3 0.634085 61 3 0.5445887 34 4 0.779695 95 5 0.8997742 112 4 0.839683 77 7 0.473160 57 5 0.857900 94 5 0.857079 47 3 0.7382007 150 5 0.7696296 92 5 0.874432 105 7 0.7273638 63 5 0.827895 78 7 0.743588 114 5 0.676575 108 5 0.890154 143 7 0.5610694 89 5 0.7981593 81 7 0.2000000 123 3 0.2984659 114 7 0.4806878 57 5 0.2155067 125 7 0.7084196 79 5 0.437763 81 3 0.5224181 40 3 0.5609655 83 3 0.550064 81 7 0.853655 0.714779 0.846717 0.9092496 0.7274809 0.861780 0.8505089 0.7817123 0.7711487 0.8644047 0.8057426 0.8379235 0.7738462 0.745824 0.7149801 0.86802185 0.625740 0.5624335 0.8063644 0.848288 0.835369 0.4360861 0.807541 0.7637143 0.741800 0.8078937 0.852382 0.9310286 0.833276 0.758848 0.654829 0.923474 0.4353292 0.7585691 0.2964817 0.2423351 0.7128317 0.1907465 0.5411402 0.445526 0.408413 0.4472296 0.539816 3 0.801632 0.785271 0.01252344 3 0.820359 0.779230 0.04112915 0.0364969 0.96402859 lowCoverage 1 1.00000 lowCoverage 0.1345793 0.9316145 lowCoverage 1 1.00000 lowCoverage 0.02530719 0.5359170 lowCoverage 1 lowCoverage 0.801632 0.3373083 0.4359466 3 0.820359 0.347039 0.47332018 5.9072e-26 1.0000e+00 lowCoverage 1.7374e-24 1.0000e+00 lowCoverage 4.3025e-07 9.9998e-01 lowCoverage 8.4363e-06 1.0000e+00 lowCoverage 0.3726307 1.0204e-02 lowCoverage 1.0855e-01 lowCoverage 0.801632 0.4917582 0.3178064 3 0.820359 0.535748 0.28461161 2.2248e-19 1.0000e+00 lowCoverage 2.0225e-17 1.0000e+00 lowCoverage 3.7326e-08 1.0000e+00 lowCoverage 1.9645e-06 1.0000e+00 lowCoverage 0.2423529 2.3745e-03 lowCoverage 6.5957e-02 lowCoverage 0.785271 0.3373083 0.43616951 7 0.779230 0.347039 0.43219104 1.7058e-15 1.0000e+00 hypermethylated 3.7083e-14 1.0000e+00 hypermethylated 9.5541e-06 9.9957e-01 hypermethylated 1.6762e-04 1.0000e+00 hypermethylated 0.3473235 1.2786e-02 weaklyHypermeth 1.2786e-01 insignificant 0.785271 0.4917582 0.29686326 5 0.779230 0.535748 2.4348e-01 5.4214e-10 1.0000e+00 hypermethylated 2.5816e-08 1.000000 hypermethylated 1.3228e-05 0.99998297 hypermethylated 4.1338e-04 1.00000 hypermethylated 0.21704567 3.4840e-03 lowCoverage 1.0558e-01 lowCoverage 0.3373083 0.4917582 -0.1169759 5 0.347039 0.535748 -1.8871e-01 9.3899e-01 1.0410e-02 weaklyHypometh 1.0000e+00 7.8861e-02 weaklyHypometh 7.4549e-01 3.4193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1302778 2.5376e-01 lowCoverage 1.00000000 lowCoverage chr1 10670104 10671104 417 ENSG00000209421 0.914279 384 11 0.802517 474 11 0.874173 380 11 0.8988620 385 11 0.865172 202 11 0.9073859 559 11 0.8024142 354 9 0.854049 381 11 0.874636 404 11 0.844370 337 11 0.8621029 371 11 0.885843 160 8 0.870048 409 11 0.925715 271 8 0.873175 435 11 0.829316 110 7 0.736895 60 7 0.7531813 568 11 0.933746 369 11 0.8738265 443 11 0.763760 166 10 0.764520 206 11 0.785544 398 11 0.827188 219 11 0.8616478 149 9 0.8806001 518 11 0.822149 274 11 0.7980614 295 11 0.886076 415 11 0.905321 574 11 0.877218 517 11 0.934704 516 11 0.7863148 352 11 0.8298135 282 11 0.9180001 450 10 0.4502116 111 7 0.7854632 347 11 0.4071374 509 11 0.9061307 346 11 0.887851 382 11 0.8516828 313 11 0.8346983 394 11 0.864874 337 11 0.919638 0.811988 0.896775 0.9050835 0.8786925 0.923720 0.8517781 0.8549293 0.8822189 0.9316725 0.8903192 0.8665676 0.8842165 0.916576 0.8866399 0.87618623 0.820561 0.8378403 0.9317709 0.892850 0.819113 0.8265004 0.881235 0.9071283 0.833493 0.9105392 0.851516 0.8964597 0.900730 0.917058 0.895133 0.938369 0.8123853 0.8374132 0.8904698 0.5100971 0.8639749 0.5179636 0.9010731 0.909621 0.883007 0.8700142 0.905456 10 0.881361 0.886401 -0.00741460 11 0.810709 0.739204 0.07150476 0.9711987 0.45365776 insignificant 1 1.00000 insignificant 0.7011165 0.8041247 insignificant 1 1.00000 insignificant 0.01685297 0.4125770 insignificant 1 insignificant 0.881486 0.7274500 0.1435335 11 0.878268 0.652420 0.22584738 5.2910e-10 9.9979e-01 weaklyHypermeth 5.8142e-09 1.0000e+00 weaklyHypermeth 5.3863e-03 9.6462e-01 weaklyHypermeth 3.8750e-02 1.0000e+00 weaklyHypermeth 0.1629286 1.2064e-01 insignificant 7.2673e-01 insignificant 0.881469 0.8781038 -0.0012435 11 0.867201 0.864542 0.00265904 3.8408e-01 2.0912e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4670e-01 2.4647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0099620 5.7547e-01 insignificant 1.0000e+00 insignificant 0.886610 0.7274500 0.15023410 11 0.800804 0.652420 0.14838389 7.2749e-07 1.0000e+00 weaklyHypermeth 6.8631e-06 1.0000e+00 weaklyHypermeth 3.0714e-02 9.7119e-01 weaklyHypermeth 1.9944e-01 1.0000e+00 insignificant 0.1460757 1.5604e-01 insignificant 8.4803e-01 insignificant 0.887238 0.8781038 0.00953727 11 0.873605 0.864542 9.0625e-03 4.8722e-01 6.1803e-01 insignificant 1.0000e+00 1.000000 insignificant 5.1723e-01 0.57370007 insignificant 1.0000e+00 1.00000 insignificant -0.02681494 2.1691e-01 insignificant 1.0000e+00 insignificant 0.7281601 0.8781038 -0.1369027 11 0.711731 0.864542 -1.5281e-01 9.9999e-01 7.6171e-04 weaklyHypometh 1.0000e+00 7.9345e-03 weaklyHypometh 9.9623e-01 2.2431e-02 weaklyHypometh 1.0000e+00 2.0392e-01 insignificant -0.1728906 1.0415e-01 insignificant 0.71829414 insignificant chr1 10672208 10673208 419 ENSG00000209421 0.864857 301 6 0.885231 171 7 0.876395 160 4 0.8584388 211 5 0.908337 138 7 0.9447737 363 6 0.9447495 256 7 0.860412 187 6 0.822389 176 4 0.943964 181 7 0.9035815 272 7 0.948705 155 7 0.913552 250 7 0.941176 50 2 0.951242 224 7 0.923913 133 7 0.910518 166 7 0.9541166 245 4 0.885764 180 7 0.9255075 299 6 0.846883 74 4 0.952058 132 5 0.923192 195 4 0.897487 99 6 0.6857348 66 4 0.9420599 210 7 0.867180 133 4 0.7092063 101 4 0.835732 133 4 0.929014 214 7 0.952210 262 7 0.929287 416 7 0.9060289 144 4 0.8902351 124 6 1.0000000 271 7 0.8979167 51 4 0.9334469 199 6 0.8811490 213 7 0.9712377 271 4 0.969902 263 5 0.9356184 204 4 0.9278778 325 4 0.955655 248 4 0.916353 0.866889 0.831299 0.8999834 0.9221752 0.897693 0.9234259 0.8823357 0.8889205 0.9395760 0.8706563 0.9514884 0.9070991 0.904065 0.9553274 0.94240882 0.959004 0.9134220 0.8937188 0.911809 0.842718 0.9278867 0.909984 0.8682639 0.855278 0.9152015 0.849983 0.8841587 0.800945 0.889755 0.935237 0.910464 0.8714851 0.7943473 1.0000000 0.8787500 0.8848613 0.9373106 0.9545640 0.953499 0.909635 0.9145772 0.932439 4 0.908451 0.901229 0.00687990 7 0.915128 0.924383 -0.00925457 0.5571410 0.39502164 insignificant 1 1.00000 insignificant 0.3945196 0.5180147 insignificant 1 1.00000 insignificant 0.03587757 0.2148846 insignificant 1 insignificant 0.908451 0.9141717 -0.0037423 7 0.915128 0.927945 -0.01281657 8.3317e-01 2.6108e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8284e-01 1.7631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0097482 6.3722e-01 insignificant 1.0000e+00 insignificant 0.908451 0.9412662 -0.0299724 4 0.915128 0.965261 -0.05013335 9.9981e-01 1.5801e-03 lowCoverage 1.0000e+00 1.7557e-01 lowCoverage 9.9887e-01 6.2441e-03 lowCoverage 1.0000e+00 4.8416e-01 lowCoverage -0.0436769 3.5902e-03 lowCoverage 8.7565e-02 lowCoverage 0.901229 0.9141717 -0.00842580 7 0.924383 0.927945 -0.00356200 8.5802e-01 2.4948e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3714e-01 2.8805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0456258 1.7007e-01 insignificant 8.9967e-01 insignificant 0.901229 0.9412662 -0.04315595 4 0.924383 0.965261 -4.0879e-02 9.9904e-01 2.2359e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9976e-01 0.00735853 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.07955450 1.2844e-02 lowCoverage 2.7327e-01 lowCoverage 0.9141717 0.9412662 -0.0261609 4 0.927945 0.965261 -3.7317e-02 9.7715e-01 1.8701e-01 lowCoverage 1.0000e+00 9.4931e-01 lowCoverage 9.8190e-01 2.2906e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0339287 1.3209e-01 lowCoverage 0.86900066 lowCoverage chr1 10673328 10674328 420 ENSG00000209421 0.925429 264 6 0.863098 149 6 0.856546 94 6 0.9258333 172 6 0.818182 39 2 0.9475047 340 6 0.8373016 38 6 0.953568 152 6 0.898810 104 6 0.959664 140 6 0.8728225 238 6 0.888889 10 0 0.930357 153 6 0.980392 96 6 0.932424 138 6 1.000000 38 4 NA 0 0 0.7858391 265 6 0.941513 420 6 0.9432941 299 6 0.697917 48 2 0.916667 12 0 0.942786 124 6 0.961538 34 2 1.0000000 14 0 0.9645571 279 6 0.772610 165 6 0.8649573 51 6 0.938750 338 6 0.955889 239 6 0.964942 217 6 0.931854 304 6 0.9316258 206 6 0.9046570 300 6 1.0000000 97 2 NA 0 0 0.8474702 148 6 0.8313272 331 6 0.9188313 174 6 0.952208 183 6 0.9478256 170 6 0.8761693 293 6 0.809304 148 6 0.921360 0.841691 0.826188 0.9301096 0.8196770 0.947872 0.8038847 0.9533107 0.8956767 0.9514153 0.8842145 0.8596491 0.9147713 0.982972 0.9176316 1.00000000 NA 0.8829649 0.9377455 0.941489 0.717105 0.8947368 0.935767 0.9514170 1.000000 0.9610809 0.898875 0.8645074 0.934693 0.952770 0.953051 0.928156 0.9225827 0.8897770 1.0000000 NA 0.9563753 0.8287645 0.9230740 0.947745 0.947642 0.8887211 0.945165 0 0.917064 0.932055 -0.01621747 6 0.814930 0.889208 -0.07427788 0.9913324 0.33730583 insignificant 1 1.00000 insignificant 0.9975307 0.4204302 insignificant 1 1.00000 insignificant -0.00087394 0.9761752 lowCoverage 1 lowCoverage 0.917064 0.8937153 0.0218881 6 0.814930 0.840415 -0.02548505 8.5302e-02 6.2504e-01 insignificant 3.9129e-01 1.0000e+00 insignificant 9.4791e-01 3.4884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0054822 8.7417e-01 lowCoverage 1.0000e+00 lowCoverage 0.917064 0.9235537 -0.0072705 6 0.814930 0.891542 -0.07661179 2.7771e-01 6.5696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0752e-01 5.2209e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0076306 8.0534e-01 insignificant 1.0000e+00 insignificant 0.932055 0.8937153 0.03804951 6 0.889208 0.840415 0.04879283 5.2299e-02 9.6506e-01 insignificant 2.5265e-01 1.0000e+00 insignificant 6.9374e-01 7.8089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0063561 8.7627e-01 lowCoverage 1.0000e+00 lowCoverage 0.932055 0.9235537 0.00659159 6 0.889208 0.891542 -2.3339e-03 1.8016e-01 6.1322e-01 insignificant 1.0000e+00 1.000000 insignificant 2.9728e-01 0.76976261 insignificant 1.0000e+00 1.00000 insignificant 0.00850450 8.2224e-01 lowCoverage 1.0000e+00 lowCoverage 0.8937153 0.9235537 -0.0314400 6 0.840415 0.891542 -5.1127e-02 4.2866e-01 5.2346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1406e-01 8.7866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0021484 9.5890e-01 lowCoverage 1.00000000 lowCoverage chr1 10674010 10675010 421 ENSG00000209421 0.925429 264 6 0.863098 149 6 0.856546 94 6 0.9258333 172 6 0.818182 39 2 0.9475047 340 6 0.8373016 38 6 0.953568 152 6 0.898810 104 6 0.959664 140 6 0.8728225 238 6 0.888889 10 0 0.930357 153 6 0.980392 96 6 0.932424 138 6 1.000000 38 4 NA 0 0 0.7858391 265 6 0.941513 420 6 0.9432941 299 6 0.697917 48 2 0.916667 12 0 0.942786 124 6 0.961538 34 2 1.0000000 14 0 0.9645571 279 6 0.772610 165 6 0.8649573 51 6 0.938750 338 6 0.955889 239 6 0.964942 217 6 0.931854 304 6 0.9316258 206 6 0.9046570 300 6 1.0000000 97 2 NA 0 0 0.8474702 148 6 0.8313272 331 6 0.9188313 174 6 0.952208 183 6 0.9478256 170 6 0.8761693 293 6 0.809304 148 6 0.921360 0.841691 0.826188 0.9301096 0.8196770 0.947872 0.8038847 0.9533107 0.8956767 0.9514153 0.8842145 0.8596491 0.9147713 0.982972 0.9176316 1.00000000 NA 0.8829649 0.9377455 0.941489 0.717105 0.8947368 0.935767 0.9514170 1.000000 0.9610809 0.898875 0.8645074 0.934693 0.952770 0.953051 0.928156 0.9225827 0.8897770 1.0000000 NA 0.9563753 0.8287645 0.9230740 0.947745 0.947642 0.8887211 0.945165 0 0.917064 0.932055 -0.01621747 6 0.814930 0.889208 -0.07427788 0.9913324 0.33730583 insignificant 1 1.00000 insignificant 0.9975307 0.4204302 insignificant 1 1.00000 insignificant -0.00087394 0.9761752 lowCoverage 1 lowCoverage 0.917064 0.8937153 0.0218881 6 0.814930 0.840415 -0.02548505 8.5302e-02 6.2504e-01 insignificant 3.9129e-01 1.0000e+00 insignificant 9.4791e-01 3.4884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0054822 8.7417e-01 lowCoverage 1.0000e+00 lowCoverage 0.917064 0.9235537 -0.0072705 6 0.814930 0.891542 -0.07661179 2.7771e-01 6.5696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0752e-01 5.2209e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0076306 8.0534e-01 insignificant 1.0000e+00 insignificant 0.932055 0.8937153 0.03804951 6 0.889208 0.840415 0.04879283 5.2299e-02 9.6506e-01 insignificant 2.5265e-01 1.0000e+00 insignificant 6.9374e-01 7.8089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0063561 8.7627e-01 lowCoverage 1.0000e+00 lowCoverage 0.932055 0.9235537 0.00659159 6 0.889208 0.891542 -2.3339e-03 1.8016e-01 6.1322e-01 insignificant 1.0000e+00 1.000000 insignificant 2.9728e-01 0.76976261 insignificant 1.0000e+00 1.00000 insignificant 0.00850450 8.2224e-01 lowCoverage 1.0000e+00 lowCoverage 0.8937153 0.9235537 -0.0314400 6 0.840415 0.891542 -5.1127e-02 4.2866e-01 5.2346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1406e-01 8.7866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0021484 9.5890e-01 lowCoverage 1.00000000 lowCoverage chr1 10688650 10689650 424 ENSG00000209421 0.867794 501 10 0.772849 330 9 0.728621 361 10 0.8249352 518 10 0.865813 184 10 0.8726533 667 10 0.7786167 278 10 0.798784 293 10 0.797052 411 10 0.939485 321 10 0.8145505 407 10 0.768250 257 10 0.820583 335 10 0.878752 242 8 0.790340 342 10 0.769249 250 8 0.744362 589 7 0.7399416 590 10 0.695277 314 10 0.9164133 458 10 0.751910 159 10 0.697682 277 10 0.803669 258 10 0.712165 189 9 0.8672092 216 10 0.6481728 376 9 0.880972 212 10 0.7843915 246 10 0.876617 275 10 0.868346 428 9 0.847478 415 10 0.935992 539 10 0.6587852 255 9 0.6825335 288 10 0.7094242 310 9 0.6864003 100 7 0.6828195 289 12 0.7761629 354 10 0.7938707 282 9 0.743964 438 10 0.8775431 309 10 0.8803017 596 10 0.887522 395 10 0.872595 0.820726 0.783517 0.9042129 0.9005307 0.866253 0.8928331 0.8594624 0.8638834 0.9451596 0.8861485 0.9220717 0.8857792 0.846544 0.8831984 0.86452289 0.839529 0.7961424 0.8376297 0.896166 0.824250 0.7680342 0.873269 0.8682600 0.814546 0.8615401 0.842504 0.8755686 0.887112 0.869260 0.877297 0.929439 0.7941281 0.7182766 0.8264205 0.6851523 0.8277461 0.8781671 0.7878394 0.849523 0.893117 0.8757815 0.870753 8 0.876030 0.862598 0.00582639 10 0.794355 0.774470 0.01988495 0.2175162 0.83930350 insignificant 1 1.00000 insignificant 0.2447837 0.3575309 insignificant 1 1.00000 insignificant 0.00299907 0.9195357 insignificant 1 insignificant 0.876014 0.7587719 0.1065591 10 0.778536 0.683603 0.09493251 6.4409e-14 5.1908e-01 weaklyHypermeth 9.0717e-13 1.0000e+00 weaklyHypermeth 1.9356e-04 4.4764e-01 weaklyHypermeth 2.0812e-03 1.0000e+00 weaklyHypermeth 0.1098618 2.3646e-04 weaklyHypermeth 5.2927e-03 weaklyHypermeth 0.876014 0.8584158 0.0217211 10 0.778536 0.790636 -0.01209998 7.9447e-02 2.6025e-01 insignificant 6.5659e-01 1.0000e+00 insignificant 9.0573e-02 2.9070e-01 insignificant 8.7089e-01 1.0000e+00 insignificant -0.0274242 4.2626e-01 insignificant 1.0000e+00 insignificant 0.862483 0.7587719 0.10186687 10 0.757121 0.683603 0.07351794 1.8416e-11 4.9020e-01 weaklyHypermeth 2.9231e-10 1.0000e+00 weaklyHypermeth 2.1731e-05 1.8530e-01 weaklyHypermeth 3.4493e-04 1.0000e+00 weaklyHypermeth 0.1068627 2.9203e-03 weaklyHypermeth 3.8000e-02 weaklyHypermeth 0.862483 0.8584158 0.01077426 10 0.757121 0.790636 -3.3515e-02 3.6242e-01 6.8421e-02 insignificant 1.0000e+00 1.000000 insignificant 4.9973e-01 0.23863841 insignificant 1.0000e+00 1.00000 insignificant -0.03042328 4.4651e-01 insignificant 1.0000e+00 insignificant 0.7587719 0.8584158 -0.0864452 10 0.683603 0.790636 -1.0703e-01 7.3918e-01 1.3203e-05 weaklyHypometh 1.0000e+00 2.2004e-04 weaklyHypometh 6.9887e-01 4.3087e-03 weaklyHypometh 1.0000e+00 5.5957e-02 weaklyHypometh -0.1372860 5.1221e-03 weaklyHypometh 0.08396853 weaklyHypometh chr1 10695403 10696403 425 ENSG00000209421 0.844557 158 5 0.871407 192 5 0.824504 133 5 0.8401287 192 5 0.919231 97 5 0.8941862 201 5 0.8023106 99 5 0.913656 175 5 0.825282 129 5 0.892222 131 5 0.8195116 214 5 0.878739 53 4 0.748301 172 5 0.836706 78 5 0.911653 131 5 0.643569 83 5 0.966667 17 1 0.7909091 179 5 0.808788 121 4 0.9385675 147 5 0.926667 53 4 0.854167 101 5 0.986784 127 5 0.837437 75 5 0.7356643 109 3 0.8567210 222 5 0.738928 96 5 0.9369963 69 4 0.955511 129 5 0.827088 270 5 0.719151 259 5 0.906850 211 5 0.7420673 147 5 0.8779645 83 5 0.6666667 5 0 0.5991228 28 1 0.5088519 146 5 0.5888673 244 5 0.8406138 168 5 0.780492 134 5 0.8864916 160 5 0.7955556 135 5 0.847097 124 5 0.873647 0.880233 0.870825 0.8737944 0.9101419 0.913038 0.8282132 0.9160782 0.8317247 0.8805787 0.8573028 0.8716159 0.8153993 0.848013 0.9232885 0.75009978 0.901504 0.8381866 0.8735795 0.936472 0.959896 0.9120009 0.980355 0.8456538 0.816755 0.8902568 0.786470 0.9605846 0.966836 0.870019 0.911943 0.909880 0.7520291 0.9055011 0.8053606 0.5814830 0.6816768 0.8139730 0.9043558 0.858973 0.927762 0.8491898 0.883138 1 0.869356 0.894063 -0.02101856 5 0.851068 0.865022 -0.01395371 0.8513826 0.02124178 weaklyHypometh 1 0.97039 insignificant 0.7920964 0.0218017 weaklyHypometh 1 1.00000 insignificant -0.00828552 0.7902697 lowCoverage 1 lowCoverage 0.869356 0.7469325 0.1229003 5 0.851068 0.680089 0.17097905 1.2531e-06 9.9999e-01 weaklyHypermeth 1.0271e-05 1.0000e+00 weaklyHypermeth 3.1939e-03 8.1025e-01 weaklyHypermeth 2.4196e-02 1.0000e+00 weaklyHypermeth 0.1846213 1.6521e-02 lowCoverage 1.5019e-01 lowCoverage 0.869356 0.9209431 -0.0199501 5 0.851068 0.837588 0.01347987 3.5968e-01 2.1263e-02 weaklyHypometh 1.0000e+00 8.8595e-01 insignificant 1.7361e-01 6.1770e-03 weaklyHypometh 1.0000e+00 4.8416e-01 insignificant 0.0184947 4.7684e-01 lowCoverage 1.0000e+00 lowCoverage 0.894124 0.7457887 0.14450583 5 0.887518 0.566741 0.32077730 1.3419e-06 1.0000e+00 weaklyHypermeth 1.2089e-05 1.0000e+00 weaklyHypermeth 4.0127e-03 9.9969e-01 weaklyHypermeth 3.2102e-02 1.0000e+00 weaklyHypermeth 0.1929068 1.3000e-02 lowCoverage 1.2871e-01 lowCoverage 0.894063 0.9209431 0.00487159 5 0.865022 0.837588 2.7434e-02 4.3039e-01 6.8762e-01 insignificant 1.0000e+00 1.000000 insignificant 5.7210e-01 0.38930464 insignificant 1.0000e+00 1.00000 insignificant 0.02678026 4.1926e-01 lowCoverage 1.0000e+00 lowCoverage 0.7469325 0.9209431 -0.1190999 5 0.680089 0.837588 -1.5750e-01 9.9955e-01 1.1438e-03 weaklyHypometh 1.0000e+00 1.1438e-02 weaklyHypometh 9.4984e-01 2.3529e-02 weaklyHypometh 1.0000e+00 2.1008e-01 insignificant -0.1661266 2.5318e-02 lowCoverage 0.26101508 lowCoverage chr1 10699619 10700619 427 ENSG00000209421 0.805076 379 8 0.757956 234 8 0.581414 266 8 0.8364652 386 8 0.764951 133 8 0.8760114 481 8 0.7857864 157 8 0.851415 177 8 0.752577 265 8 0.841007 188 8 0.8693764 288 8 0.772341 130 8 0.678113 302 8 0.871429 51 6 0.834671 262 8 0.774107 95 5 0.702460 113 8 0.7916153 441 8 0.833317 106 3 0.8114641 370 8 0.917708 62 5 0.606974 178 8 0.914212 207 8 0.807624 87 8 0.7599603 106 7 0.8453146 329 8 0.748115 94 7 0.9169382 81 7 0.796101 209 8 0.807875 361 8 0.871646 315 8 0.884338 430 8 0.5254361 278 8 0.3931801 215 8 0.5397403 178 5 0.6691964 52 5 0.3966707 172 8 0.6921991 311 8 0.6444024 303 8 0.762108 358 8 0.6563568 293 8 0.7212176 421 8 0.732599 393 8 0.795594 0.748338 0.587235 0.8401907 0.7748943 0.874111 0.7972852 0.8055724 0.7577470 0.8465308 0.8638484 0.8113587 0.7002963 0.832022 0.8375977 0.75524129 0.686072 0.7980613 0.8581818 0.824255 0.904320 0.5666872 0.910903 0.8343451 0.758244 0.8318189 0.759284 0.9254052 0.765132 0.829610 0.869150 0.891996 0.6456477 0.4102506 0.4444427 0.6049577 0.5149474 0.7462437 0.6379916 0.766813 0.655014 0.7013308 0.758705 5 0.797264 0.828386 -0.03751522 8 0.791145 0.831614 -0.04046893 0.9993756 0.00913316 weaklyHypometh 1 0.57082 insignificant 0.9983296 0.0071000 weaklyHypometh 1 0.78889 insignificant -0.03348968 0.2900676 insignificant 1 insignificant 0.797264 0.5646766 0.2211445 8 0.791145 0.534668 0.25647639 4.3890e-17 1.0000e+00 hypermethylated 7.6999e-16 1.0000e+00 hypermethylated 7.9593e-07 1.0000e+00 hypermethylated 1.5018e-05 1.0000e+00 hypermethylated 0.2535071 3.5847e-03 weaklyHypermeth 4.8442e-02 weaklyHypermeth 0.797264 0.7273756 0.0773247 8 0.791145 0.711173 0.07997148 1.2468e-04 9.9991e-01 weaklyHypermeth 1.8608e-03 1.0000e+00 weaklyHypermeth 2.2373e-04 9.9999e-01 weaklyHypermeth 4.8637e-03 1.0000e+00 weaklyHypermeth 0.0862407 1.3553e-02 weaklyHypermeth 2.3367e-01 insignificant 0.828386 0.5646766 0.26138030 8 0.831614 0.534668 0.29694533 2.2741e-14 1.0000e+00 hypermethylated 4.5481e-13 1.0000e+00 hypermethylated 2.4984e-07 1.0000e+00 hypermethylated 5.4314e-06 1.0000e+00 hypermethylated 0.2869968 1.3740e-03 weaklyHypermeth 1.9913e-02 weaklyHypermeth 0.828386 0.7273756 0.11534048 8 0.831614 0.711173 1.2044e-01 3.4741e-07 1.0000e+00 weaklyHypermeth 9.9259e-06 1.000000 weaklyHypermeth 1.7300e-06 1.00000000 weaklyHypermeth 8.6500e-05 1.00000 weaklyHypermeth 0.11973041 4.1552e-03 weaklyHypermeth 1.2221e-01 insignificant 0.5646766 0.7273756 -0.1428470 8 0.534668 0.711173 -1.7650e-01 9.9992e-01 4.4359e-04 weaklyHypometh 1.0000e+00 5.0987e-03 weaklyHypometh 9.9978e-01 5.8948e-03 weaklyHypometh 1.0000e+00 7.0387e-02 weaklyHypometh -0.1672664 2.2795e-02 weaklyHypometh 0.24003163 insignificant chr1 10705112 10706112 429 ENSG00000209421 0.948933 309 6 0.885135 193 5 0.895835 193 6 0.9845614 246 4 0.887632 165 6 0.9379899 343 6 0.9084630 223 6 0.926816 179 6 0.896345 163 6 0.943253 217 6 0.9143902 216 6 0.960289 124 5 0.938281 189 5 0.739266 94 3 0.961588 239 6 0.736040 138 6 0.870588 69 3 0.9194181 360 5 0.951743 325 6 0.9412229 399 6 0.883318 131 5 0.969697 33 3 0.921257 235 6 0.908784 103 6 1.0000000 11 0 0.9141566 235 6 0.903926 179 6 0.9316378 128 6 0.843075 280 6 0.925212 179 6 0.960802 201 6 0.958325 337 6 0.8485854 185 6 0.7063396 361 6 0.8243088 287 5 1.0000000 26 3 0.6486093 154 6 0.8756300 219 6 0.9038390 265 6 0.981395 218 6 0.9498422 212 4 0.9847810 377 5 0.963974 161 4 0.950329 0.833795 0.923685 0.9662653 0.9569640 0.896069 0.8997795 0.8811798 0.9341648 0.9341635 0.9171475 0.9360690 0.9225436 0.877578 0.9619030 0.84551257 0.922770 0.8584033 0.9164826 0.924997 0.891905 0.9714424 0.930996 0.8211460 0.996274 0.9521811 0.882055 0.9059368 0.861050 0.918536 0.972863 0.939570 0.8573211 0.7010877 0.8052348 0.9879716 0.8255118 0.8893058 0.9345998 0.959330 0.923935 0.9602335 0.934230 3 0.924007 0.922027 0.00050045 6 0.863995 0.926446 -0.06245032 0.2507098 0.51773820 insignificant 1 1.00000 insignificant 0.7741283 0.1428977 insignificant 1 1.00000 insignificant -0.01929323 0.3160227 insignificant 1 insignificant 0.924007 0.8079740 0.1077380 6 0.863995 0.764639 0.09935608 9.8201e-08 9.9992e-01 weaklyHypermeth 8.6141e-07 1.0000e+00 weaklyHypermeth 1.7995e-02 9.9083e-01 weaklyHypermeth 1.1536e-01 1.0000e+00 insignificant 0.0901440 1.4259e-01 insignificant 8.3389e-01 insignificant 0.924007 0.9504870 -0.0223059 6 0.863995 0.957342 -0.09334629 8.0883e-01 1.2618e-04 weaklyHypometh 1.0000e+00 4.2060e-02 weaklyHypometh 9.8889e-01 3.7429e-03 weaklyHypometh 1.0000e+00 4.1587e-01 insignificant -0.0493766 3.2462e-02 weaklyHypometh 4.2293e-01 insignificant 0.921989 0.8084760 0.10651514 6 0.914187 0.808746 0.10544080 4.8307e-05 9.9999e-01 weaklyHypermeth 3.7159e-04 1.0000e+00 weaklyHypermeth 2.5725e-02 9.7459e-01 weaklyHypermeth 1.7036e-01 1.0000e+00 insignificant 0.1094372 8.6253e-02 insignificant 5.4247e-01 insignificant 0.921989 0.9504468 -0.02467220 6 0.914187 0.950232 -3.6045e-02 9.3622e-01 3.5765e-03 weaklyHypometh 1.0000e+00 0.596075 insignificant 5.2592e-01 0.00603876 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.03008335 1.4541e-01 insignificant 1.0000e+00 insignificant 0.8074736 0.9505272 -0.1332071 6 0.731559 0.962674 -2.3111e-01 9.9996e-01 9.2485e-05 weaklyHypometh 1.0000e+00 1.2498e-03 weaklyHypometh 1.0000e+00 2.1343e-03 weaklyHypometh 1.0000e+00 3.2338e-02 weaklyHypometh -0.1395206 4.0786e-02 weaklyHypometh 0.37764869 insignificant chr1 10707102 10708102 430 ENSG00000209421 0.827617 238 7 0.524965 193 7 0.784279 214 7 0.9099238 278 7 0.727954 127 7 0.7927826 279 7 0.6480737 164 7 0.744637 226 7 0.788965 128 7 0.957417 227 7 0.7886050 263 7 0.805357 75 7 0.464529 228 7 0.856234 132 7 0.736449 274 7 0.576355 72 2 0.000000 2 0 0.4094033 611 7 0.869351 388 7 0.6600529 177 7 0.542023 71 5 0.624718 123 7 0.680001 141 7 0.642361 90 7 0.7630234 159 7 0.8614891 280 7 0.442059 257 7 0.6984890 85 7 0.706720 381 7 0.738493 350 7 0.755700 279 7 0.909246 239 7 0.0079365 242 7 0.0075077 300 7 0.0000000 230 7 0.0833333 11 0 0.1636419 299 7 0.0602863 408 7 0.5367384 152 7 0.498569 186 7 0.6852013 164 7 0.6114452 299 7 0.546046 186 7 0.791348 0.635448 0.769120 0.8615880 0.7497319 0.857978 0.7703305 0.7796640 0.7976859 0.9514290 0.9078442 0.7811937 0.7701963 0.827745 0.7852184 0.72877859 NA 0.5833801 0.8709476 0.767911 0.764040 0.5690708 0.845076 0.7007633 0.870168 0.8255646 0.766758 0.8959014 0.845982 0.861325 0.789193 0.917266 0.0051718 0.0086518 0.0000000 0.0866687 0.0217753 0.0806040 0.6232926 0.509524 0.741400 0.5712018 0.580523 7 0.760419 0.802530 -0.03969972 7 0.573325 0.561967 0.01135796 0.8515959 0.19663929 insignificant 1 1.00000 insignificant 0.9430362 0.4876809 insignificant 1 1.00000 insignificant -0.00337944 0.9563054 insignificant 1 insignificant 0.761549 0.0308932 0.7297142 7 0.574990 0.150912 0.42407785 1.2902e-62 1.0000e+00 hypermethylated 2.1503e-60 1.0000e+00 hypermethylated 4.0500e-15 9.9992e-01 hypermethylated 2.3823e-13 1.0000e+00 hypermethylated 0.6398632 2.6372e-11 hypermethylated 1.5513e-09 hypermethylated 0.762640 0.5862069 0.1628508 7 0.669793 0.509943 0.15984996 3.6436e-06 9.9999e-01 weaklyHypermeth 8.2810e-05 1.0000e+00 weaklyHypermeth 2.8028e-06 9.9996e-01 weaklyHypermeth 8.4932e-05 1.0000e+00 weaklyHypermeth 0.1180476 5.8400e-02 insignificant 6.3354e-01 insignificant 0.802288 0.0308725 0.77008179 7 0.536631 0.140133 0.39649829 8.9843e-58 9.9997e-01 hypermethylated 1.7969e-55 1.0000e+00 hypermethylated 7.1754e-12 1.0000e+00 hypermethylated 4.4846e-10 1.0000e+00 hypermethylated 0.6432426 1.6255e-10 hypermethylated 1.8061e-08 hypermethylated 0.804758 0.5856130 0.21047623 7 0.622597 0.467448 1.5515e-01 1.4095e-08 1.0000e+00 hypermethylated 5.4211e-07 1.000000 hypermethylated 4.2776e-04 0.99919525 hypermethylated 1.0185e-02 1.00000 hypermethylated 0.12142702 2.8805e-02 weaklyHypermeth 4.3644e-01 insignificant 0.0289757 0.5862069 -0.5570237 7 0.041987 0.509943 -4.6796e-01 1.0000e+00 4.3543e-31 hypomethylated 1.0000e+00 8.7087e-29 hypomethylated 1.0000e+00 4.4898e-08 hypomethylated 1.0000e+00 3.3363e-06 hypomethylated -0.5218156 1.5474e-06 hypomethylated 0.00051579 hypomethylated chr1 10738458 10739458 436 ENSG00000209421 0.708226 131 7 0.898636 44 5 0.708571 67 5 0.7651144 112 7 0.914286 30 5 0.8910364 97 7 0.7700000 21 2 0.876548 104 5 0.795000 68 5 0.851429 61 5 0.9615686 73 5 0.800000 20 0 0.807310 81 5 0.815359 75 4 0.906456 89 4 1.000000 1 0 0.933333 7 0 0.8866578 148 7 0.708427 86 5 0.8695665 74 5 0.971429 22 1 0.637249 53 5 0.870606 50 5 0.804529 55 5 0.8583333 38 4 0.8005676 90 5 0.876996 67 5 0.7574825 55 4 0.904167 70 5 0.836465 77 4 0.657263 79 5 0.680398 80 5 0.1122114 89 5 0.1800000 45 5 0.0816799 310 9 0.1120000 164 5 0.3209620 88 5 0.1738364 110 9 0.5710544 152 7 0.513095 102 7 0.7133081 93 7 0.4974702 92 7 0.578636 98 7 0.898349 0.902020 0.715584 0.8649898 0.9047619 0.920465 0.7838384 0.8801220 0.8168350 0.8741703 0.9599921 0.7904040 0.8117136 0.822407 0.9037144 NA 0.946128 0.8549396 0.8167482 0.789445 0.976912 0.6410056 0.875696 0.8008801 0.852132 0.8064546 0.872283 0.7769443 0.909301 0.902439 0.834479 0.891070 0.1120006 0.1777778 0.1447358 NA 0.3232837 0.2360323 0.5707211 0.660131 0.637918 0.4912217 0.622533 0 0.854874 0.842177 0.01410263 5 0.810699 0.755026 0.05567306 0.2664195 0.96252655 insignificant 1 1.00000 insignificant 0.5742552 0.9528332 insignificant 1 1.00000 insignificant 0.03875253 0.2879886 lowCoverage 1 lowCoverage 0.854874 0.1650124 0.6766343 5 0.810699 0.135826 0.67487277 1.4992e-55 1.0000e+00 hypermethylated 1.6658e-53 1.0000e+00 hypermethylated 2.1212e-15 1.0000e+00 hypermethylated 1.5151e-13 1.0000e+00 hypermethylated 0.6799280 1.1732e-07 lowCoverage 5.5869e-06 lowCoverage 0.853852 0.6242991 0.2390698 5 0.779629 0.588964 0.19066554 6.2137e-18 9.9999e-01 hypermethylated 4.7798e-16 1.0000e+00 hypermethylated 1.1364e-09 1.0000e+00 hypermethylated 9.4704e-08 1.0000e+00 hypermethylated 0.2686634 6.6591e-04 lowCoverage 2.8953e-02 lowCoverage 0.842177 0.1650124 0.66251310 5 0.755026 0.135826 0.61919971 1.3830e-33 1.0000e+00 hypermethylated 7.6835e-32 1.0000e+00 hypermethylated 1.0896e-11 1.0000e+00 hypermethylated 6.4097e-10 1.0000e+00 hypermethylated 0.6411755 9.3548e-09 lowCoverage 6.6820e-07 lowCoverage 0.841033 0.6224299 0.23931008 5 0.679523 0.488964 1.9056e-01 2.4141e-10 9.9999e-01 hypermethylated 1.2706e-08 1.000000 hypermethylated 3.6192e-07 0.99999997 hypermethylated 2.1289e-05 1.00000 hypermethylated 0.22991088 9.8856e-04 lowCoverage 3.9542e-02 lowCoverage 0.1650124 0.6235955 -0.4547899 7 0.135826 0.543293 -4.0747e-01 1.0000e+00 2.5044e-18 hypomethylated 1.0000e+00 2.2768e-16 hypomethylated 1.0000e+00 4.3303e-09 hypomethylated 1.0000e+00 8.3695e-07 hypomethylated -0.4112646 2.9167e-05 hypomethylated 0.00355970 hypomethylated chr1 10753681 10754681 438 ENSG00000209421 0.664444 61 5 0.599048 28 2 0.652747 42 5 0.6139394 36 5 0.353333 22 1 0.7738900 133 5 0.5428571 17 1 0.766667 46 4 0.640000 15 2 0.833333 27 4 0.8315508 84 5 0.720000 13 1 0.769384 61 5 NA 0 0 0.533333 14 1 0.000000 1 0 0.600000 11 0 0.4782967 61 5 0.760823 45 4 0.5484462 119 5 0.653492 44 4 0.575000 39 4 0.742857 30 4 0.632222 37 4 0.9666667 27 3 0.7265026 80 5 0.650000 33 3 0.5000000 11 1 0.781694 49 5 0.817678 104 5 0.781511 62 5 0.706349 135 5 0.2791667 61 5 0.1517912 104 5 0.1894737 166 4 0.5329365 27 3 0.2575758 48 5 0.4165850 101 5 0.7448352 47 4 0.649603 52 5 0.4433333 31 1 0.4898203 70 5 0.619709 63 5 0.661220 0.572362 0.585046 0.6067397 0.3777778 0.774916 0.6162465 0.7450980 0.6980392 0.7777778 0.7928594 0.6784314 0.7628765 NA 0.5326797 NA 0.490196 0.4828701 0.7365461 0.569905 0.629894 0.5735294 0.731092 0.5806100 0.983660 0.7018768 0.594771 0.5490196 0.756741 0.783126 0.715534 0.719560 0.3325163 0.1488149 0.1857585 0.5116324 0.2765894 0.3869025 0.7045895 0.667328 0.440523 0.5084022 0.603992 0 0.674641 0.746544 -0.05913812 5 0.686555 0.745847 -0.05929115 0.9390396 0.07531322 insignificant 1 1.00000 insignificant 0.8572619 0.2190261 insignificant 1 1.00000 insignificant -0.09631738 0.1017916 lowCoverage 1 lowCoverage 0.674641 0.2347140 0.4033064 5 0.686555 0.271157 0.41539861 4.5248e-15 1.0000e+00 hypermethylated 6.8558e-14 1.0000e+00 hypermethylated 8.8511e-07 1.0000e+00 hypermethylated 1.6093e-05 1.0000e+00 hypermethylated 0.3102588 1.3960e-03 lowCoverage 2.1477e-02 lowCoverage 0.674641 0.5779468 0.1013826 5 0.686555 0.585230 0.10132552 2.7907e-02 7.8115e-01 weaklyHypermeth 2.6833e-01 1.0000e+00 insignificant 1.6160e-01 9.6248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0253869 7.2701e-01 lowCoverage 1.0000e+00 lowCoverage 0.746544 0.2347140 0.47181323 5 0.745847 0.271157 0.47468977 1.0996e-16 1.0000e+00 hypermethylated 2.8194e-15 1.0000e+00 hypermethylated 3.2349e-07 1.0000e+00 hypermethylated 6.7395e-06 1.0000e+00 hypermethylated 0.4065762 2.5307e-04 lowCoverage 5.5015e-03 lowCoverage 0.746544 0.5779468 0.16128158 5 0.745847 0.585230 1.6062e-01 2.8167e-05 8.5774e-01 weaklyHypermeth 5.3146e-04 1.000000 weaklyHypermeth 4.4324e-02 0.95293182 weaklyHypermeth 4.8178e-01 1.00000 insignificant 0.12170426 1.0088e-01 lowCoverage 9.6079e-01 lowCoverage 0.2347140 0.5779468 -0.3076174 5 0.271157 0.585230 -3.1407e-01 9.9988e-01 5.4955e-06 hypomethylated 1.0000e+00 9.6412e-05 hypomethylated 9.9948e-01 4.6147e-04 hypomethylated 1.0000e+00 9.2294e-03 hypomethylated -0.2848720 6.3105e-03 lowCoverage 0.09604861 lowCoverage chr1 10755160 10756160 439 ENSG00000209421 0.892183 122 5 0.757381 60 7 0.749487 174 7 0.7997209 115 7 0.758397 118 9 0.8967097 227 9 0.7762385 196 10 0.863143 121 8 0.889335 143 5 0.638915 150 5 0.8508295 255 9 0.697348 65 5 0.820690 110 5 0.911956 86 3 0.669551 124 5 0.649418 74 5 0.695000 268 5 0.7916957 94 5 0.740427 236 6 0.8403265 195 7 0.953846 89 7 0.933333 11 0 0.798737 122 5 0.911726 96 5 0.8249405 86 5 0.8805556 143 9 0.827070 147 4 0.7935897 58 5 0.926643 90 5 0.850851 137 10 0.786667 127 9 0.928927 235 9 0.7858442 106 9 0.7885132 206 7 0.7514071 239 9 0.8330827 79 7 0.7617974 76 7 0.8702126 206 9 0.8982242 136 6 0.871779 153 7 0.7656970 85 3 0.5825563 126 5 0.726230 155 8 0.854436 0.754224 0.693961 0.8120471 0.7954944 0.850974 0.8338084 0.8093484 0.8305070 0.8185854 0.8049871 0.7105854 0.8832542 0.853037 0.8016973 0.51396567 0.773322 0.7784879 0.8741386 0.759517 0.922627 0.8783011 0.815595 0.7945512 0.884216 0.7991553 0.740990 0.7645824 0.843751 0.684266 0.778168 0.900809 0.8378363 0.8822566 0.8951867 0.8191832 0.7890590 0.8456971 0.8819930 0.866674 0.809024 0.7433593 0.769790 3 0.795772 0.840418 -0.02986833 6 0.761892 0.805899 -0.04400739 0.7179708 0.00123284 weaklyHypometh 1 0.26922 insignificant 0.9246219 0.0261984 weaklyHypometh 1 1.00000 insignificant -0.08363624 0.0033237 weaklyHypometh 1 insignificant 0.795772 0.8530702 -0.0476862 6 0.761892 0.766115 -0.00422384 3.5963e-01 3.2727e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 1.6158e-01 2.0385e-01 insignificant 8.0732e-01 1.0000e+00 insignificant -0.0140386 6.0431e-01 insignificant 1.0000e+00 insignificant 0.795772 0.8000000 0.0005536 6 0.761892 0.723613 0.03827825 1.3722e-01 8.4517e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3294e-01 6.2186e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0155404 8.0499e-01 insignificant 1.0000e+00 insignificant 0.840418 0.8530702 -0.01372295 7 0.805899 0.766115 0.03978355 1.8033e-01 1.1921e-01 insignificant 7.8746e-01 1.0000e+00 insignificant 1.0825e-01 6.6281e-01 insignificant 5.5800e-01 1.0000e+00 insignificant 0.0695976 1.7113e-02 weaklyHypermeth 1.5994e-01 insignificant 0.840418 0.8000000 0.03324827 7 0.805899 0.723613 8.2286e-02 2.6628e-03 9.9144e-01 weaklyHypermeth 3.2474e-02 1.000000 weaklyHypermeth 1.1130e-01 0.96052066 insignificant 9.2749e-01 1.00000 insignificant 0.09917665 1.5720e-01 insignificant 1.0000e+00 insignificant 0.8530702 0.8000000 0.0465372 7 0.766115 0.723613 4.2502e-02 2.0177e-02 9.2357e-01 weaklyHypermeth 7.2062e-01 1.0000e+00 insignificant 1.8846e-01 6.2329e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0295790 6.4043e-01 insignificant 1.00000000 insignificant chr1 10755382 10756382 440 ENSG00000209421 0.885984 295 11 0.804446 179 13 0.790277 305 13 0.8690385 212 10 0.824538 193 13 0.9099368 368 15 0.8345787 386 14 0.879091 256 14 0.893674 265 11 0.753889 242 11 0.8622623 457 15 0.802652 157 9 0.851189 243 11 0.911956 86 3 0.768556 251 11 0.735555 177 9 0.789845 405 11 0.7955401 209 10 0.822471 348 10 0.8732434 351 13 0.954101 156 12 0.896288 73 3 0.828221 287 11 0.936764 185 11 0.8213365 130 8 0.9145482 284 15 0.852791 232 9 0.8553686 136 11 0.919194 203 11 0.877871 293 16 0.828893 262 15 0.926226 469 15 0.7418207 227 15 0.7784194 379 13 0.6865522 505 15 0.8686074 110 11 0.7769246 145 13 0.8878327 319 15 0.8939959 249 12 0.894047 334 13 0.8392441 181 7 0.7404299 261 11 0.804372 248 12 0.864050 0.834821 0.809616 0.8964734 0.8679903 0.881878 0.8798604 0.8703275 0.8653799 0.8823833 0.8538021 0.8366021 0.8942172 0.887719 0.8718843 0.74437085 0.832617 0.8280533 0.9074719 0.849047 0.934242 0.8816513 0.865059 0.8608348 0.865229 0.8747894 0.812777 0.8777600 0.873807 0.791055 0.863280 0.915848 0.7111038 0.7996427 0.6001162 0.8913166 0.8016193 0.9069812 0.8930002 0.910765 0.875358 0.8242426 0.823000 4 0.847539 0.880074 -0.01946137 12 0.811415 0.845360 -0.03394454 0.8333464 0.00046034 weaklyHypometh 1 0.23017 insignificant 0.9390304 0.0104846 weaklyHypometh 1 0.95314 insignificant -0.05136401 0.0077596 weaklyHypometh 1 insignificant 0.847539 0.7964392 0.0645038 12 0.811415 0.755721 0.05569477 5.3106e-08 1.0271e-01 weaklyHypermeth 4.7843e-07 1.0000e+00 weaklyHypermeth 1.2203e-03 4.9395e-01 weaklyHypermeth 1.0342e-02 1.0000e+00 weaklyHypermeth 0.0429099 2.4106e-01 insignificant 1.0000e+00 insignificant 0.847539 0.8562451 -0.0037447 12 0.811415 0.793385 0.01803034 2.4117e-01 5.5768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1482e-01 3.4575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0014818 9.6395e-01 insignificant 1.0000e+00 insignificant 0.880074 0.7964392 0.09696341 13 0.845360 0.755721 0.08963931 1.3746e-06 5.2675e-01 weaklyHypermeth 1.2273e-05 1.0000e+00 weaklyHypermeth 9.6076e-04 9.5769e-01 weaklyHypermeth 8.8144e-03 1.0000e+00 weaklyHypermeth 0.0942739 2.7577e-02 weaklyHypermeth 2.2421e-01 insignificant 0.880074 0.8562451 0.01770494 13 0.845360 0.793385 5.1975e-02 4.6552e-03 9.6640e-01 weaklyHypermeth 5.4767e-02 1.000000 weaklyHypermeth 1.1554e-01 0.92465891 insignificant 9.4707e-01 1.00000 insignificant 0.04988222 1.7163e-01 insignificant 1.0000e+00 insignificant 0.7964392 0.8562451 -0.0715754 13 0.755721 0.793385 -3.7664e-02 1.9273e-01 3.4106e-02 weaklyHypometh 1.0000e+00 2.2363e-01 insignificant 6.7450e-01 5.3909e-02 insignificant 1.0000e+00 4.0231e-01 insignificant -0.0443917 3.2433e-01 insignificant 1.00000000 insignificant chr1 10802816 10803816 447 CASZ1 ENSG00000130940 0.892815 430 8 0.798478 464 7 0.839626 382 11 0.8754655 530 11 0.818819 231 7 0.8562900 718 11 0.8848371 407 12 0.874699 383 11 0.726453 309 7 0.917820 297 11 0.8366518 395 10 0.898789 146 8 0.852465 270 11 0.818137 207 11 0.902836 291 11 0.796298 87 8 0.766677 90 5 0.8777135 434 7 0.847717 470 11 0.7572614 449 8 0.763535 146 8 0.711348 130 7 0.676435 308 7 0.789103 235 12 0.8647142 256 11 0.9256296 631 11 0.717620 203 8 0.6544626 166 7 0.883435 342 7 0.850491 670 12 0.862433 576 13 0.744556 479 8 0.5282582 315 7 0.6764308 232 11 0.7608222 216 6 0.8333333 25 3 0.6705852 373 9 0.8498945 555 13 0.8763522 555 11 0.573339 334 6 0.9001566 360 8 0.8637154 249 5 0.708649 425 8 0.885067 0.732396 0.808426 0.9066356 0.9158161 0.893671 0.8452390 0.8682461 0.8300717 0.8732190 0.8505765 0.8391656 0.9122019 0.861263 0.8797757 0.85226472 0.753699 0.8607756 0.9046056 0.903279 0.878481 0.7740386 0.861510 0.8735479 0.882586 0.8919740 0.827079 0.8302966 0.881886 0.918264 0.870237 0.886799 0.6829581 0.6979693 0.8006660 0.8705144 0.6928345 0.8124903 0.8959856 0.807495 0.869870 0.8328205 0.874877 5 0.870044 0.876841 -0.01988362 11 0.820368 0.830542 -0.01017343 0.9369397 0.02267926 weaklyHypometh 1 0.97039 insignificant 0.6245620 0.4537337 insignificant 1 1.00000 insignificant 0.05501228 0.0693554 insignificant 1 insignificant 0.870044 0.7296037 0.1234892 8 0.820368 0.718832 0.10153612 9.2983e-12 8.1604e-01 weaklyHypermeth 1.1921e-10 1.0000e+00 weaklyHypermeth 9.5725e-04 8.0051e-01 weaklyHypermeth 8.4713e-03 1.0000e+00 weaklyHypermeth 0.1221051 5.5215e-02 insignificant 3.7057e-01 insignificant 0.869696 0.8449532 0.0095924 8 0.798146 0.747372 0.05077420 1.5873e-02 3.6401e-02 weaklyHypermeth 1.6364e-01 1.0000e+00 insignificant 1.1093e-01 2.0000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0575501 4.1427e-01 insignificant 1.0000e+00 insignificant 0.876841 0.7296037 0.14443484 8 0.830542 0.718832 0.11170955 2.2954e-09 9.8494e-01 weaklyHypermeth 2.9056e-08 1.0000e+00 weaklyHypermeth 4.5619e-02 9.3331e-01 weaklyHypermeth 2.6612e-01 1.0000e+00 insignificant 0.0670928 2.6156e-01 insignificant 1.0000e+00 insignificant 0.877057 0.8454735 0.04219541 8 0.843875 0.814038 2.9837e-02 3.8627e-03 3.4169e-01 weaklyHypermeth 4.6539e-02 1.000000 weaklyHypermeth 2.4946e-01 0.38419313 insignificant 1.0000e+00 1.00000 insignificant 0.00253781 9.7143e-01 insignificant 1.0000e+00 insignificant 0.7314219 0.8453930 -0.1057375 8 0.749769 0.800755 -5.0986e-02 9.3205e-01 9.0510e-05 weaklyHypometh 1.0000e+00 1.2399e-03 weaklyHypometh 9.8451e-01 1.5624e-01 insignificant 1.0000e+00 9.6697e-01 insignificant -0.0645550 4.4085e-01 insignificant 1.00000000 insignificant chr1 10806900 10807900 448 CASZ1 ENSG00000130940 0.741739 181 10 0.631429 101 8 0.432303 190 8 0.7364286 81 4 0.541035 144 8 0.6846032 170 10 0.5576488 168 8 0.634742 122 8 0.686432 166 8 0.656588 148 8 0.6396271 263 8 0.687552 153 8 0.379801 215 8 0.583333 9 1 0.605741 158 8 0.573414 145 7 0.527259 144 8 0.5290376 130 5 0.532646 142 9 0.5283104 208 10 0.641504 64 7 0.513393 62 3 0.675203 243 8 0.452151 104 8 0.7355769 34 2 0.4579795 175 10 0.589515 121 8 0.4313657 76 5 0.542808 86 8 0.532901 220 8 0.592732 169 10 0.714959 289 10 0.3264915 213 8 0.2274456 145 8 0.2370019 304 7 0.2650641 60 5 0.2112374 119 8 0.4476017 236 10 0.5667356 145 10 0.697180 193 10 0.7065476 95 7 0.6348906 136 10 0.496843 108 7 0.710460 0.524695 0.399738 0.6562544 0.4984697 0.744483 0.5407688 0.6242993 0.6649064 0.5775836 0.5895601 0.6075819 0.3524135 0.557202 0.5825277 0.47850598 0.429040 0.5205886 0.5096692 0.518300 0.542909 0.6495700 0.631079 0.4743129 0.573139 0.5540103 0.611236 0.4060613 0.583234 0.481618 0.589300 0.718634 0.2880384 0.2426135 0.1026674 0.0914097 0.2091888 0.3738992 0.6557936 0.724777 0.773086 0.6328257 0.617122 2 0.571758 0.577697 -0.00703293 8 0.658479 0.637646 0.02083268 0.5660500 0.85183254 insignificant 1 1.00000 insignificant 0.6095526 0.8480777 insignificant 1 1.00000 insignificant 0.02114272 0.5679654 insignificant 1 insignificant 0.571758 0.2534819 0.3004735 8 0.658479 0.351989 0.30648979 2.5647e-21 9.9994e-01 hypermethylated 5.8288e-20 1.0000e+00 hypermethylated 2.3326e-13 1.0000e+00 hypermethylated 1.1663e-11 1.0000e+00 hypermethylated 0.3086765 5.2114e-05 hypermethylated 1.5328e-03 hypermethylated 0.571758 0.6750369 -0.1094286 9 0.658479 0.631834 0.02664536 9.9935e-01 8.7559e-03 weaklyHypometh 1.0000e+00 5.1506e-01 insignificant 9.2484e-01 4.4538e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0259559 5.8417e-01 insignificant 1.0000e+00 insignificant 0.577697 0.2534819 0.31306407 8 0.637646 0.351989 0.28565711 4.0831e-19 9.9195e-01 hypermethylated 1.2009e-17 1.0000e+00 hypermethylated 1.8021e-10 1.0000e+00 hypermethylated 7.8353e-09 1.0000e+00 hypermethylated 0.2875338 6.0069e-05 hypermethylated 1.7163e-03 hypermethylated 0.577697 0.6750369 -0.10391389 8 0.637646 0.631834 5.8127e-03 9.9999e-01 6.6400e-03 weaklyHypometh 1.0000e+00 0.821073 insignificant 9.9680e-01 0.12633852 insignificant 1.0000e+00 1.00000 insignificant -0.04709862 3.6839e-01 insignificant 1.0000e+00 insignificant 0.2534819 0.6750369 -0.4017667 8 0.351989 0.631834 -2.7984e-01 9.9983e-01 2.9806e-15 hypomethylated 1.0000e+00 1.6559e-13 hypomethylated 9.9991e-01 8.1676e-06 hypomethylated 1.0000e+00 3.0251e-04 hypomethylated -0.3346324 1.8612e-04 hypomethylated 0.00809225 hypomethylated chr1 10817459 10818459 450 CASZ1 ENSG00000130940 0.159735 370 11 0.062493 483 14 0.223817 403 12 0.0106404 286 13 0.116161 309 13 0.2205714 571 12 0.0798811 452 12 0.053838 344 12 0.145549 416 12 0.169070 374 12 0.0937414 483 14 0.276664 365 12 0.067299 292 12 0.090707 127 3 0.151321 481 12 0.167171 278 12 0.090220 269 10 0.0733809 309 11 0.072983 382 12 0.0607667 505 12 0.306321 211 10 0.095733 266 11 0.146718 370 12 0.144094 282 10 0.3147431 181 10 0.1479333 484 12 0.120696 316 13 0.2044688 189 10 0.108202 259 12 0.082949 600 14 0.070084 598 12 0.307388 551 12 0.1551863 331 12 0.2879063 297 12 0.1220604 362 9 0.2492053 151 9 0.1627439 273 11 0.2844754 388 11 0.0464130 481 14 0.076673 425 11 0.0710923 283 12 0.0949019 323 11 0.127703 388 14 0.109066 0.055723 0.195801 0.0166796 0.0744385 0.153951 0.0721593 0.0729243 0.0997375 0.0991738 0.0834450 0.2261167 0.0537712 0.100841 0.0593255 0.16999752 0.061736 0.0674045 0.0751240 0.049343 0.276065 0.0710778 0.150659 0.1755432 0.182137 0.1475766 0.090379 0.2520341 0.108647 0.089127 0.041189 0.255290 0.1194593 0.1654794 0.1630462 0.1250665 0.1521273 0.2172592 0.0419518 0.096804 0.049054 0.0935499 0.134153 9 0.097080 0.138740 -0.04249065 12 0.111361 0.222299 -0.11093730 0.9999480 0.00248085 weaklyHypometh 1 0.26922 insignificant 0.9963293 0.0029766 weaklyHypometh 1 0.59532 insignificant -0.05147695 0.1059864 insignificant 1 insignificant 0.097093 0.1471405 -0.0528140 12 0.119316 0.231125 -0.11180973 2.6070e-01 6.0856e-07 weaklyHypometh 1.0000e+00 1.2171e-04 weaklyHypometh 1.6777e-01 3.5830e-03 weaklyHypometh 8.2645e-01 4.7841e-01 insignificant -0.0909625 2.5858e-02 weaklyHypometh 2.0854e-01 insignificant 0.097093 0.0852632 0.0150853 11 0.119316 0.088314 0.03100132 2.0354e-02 9.7439e-01 weaklyHypermeth 2.0354e-01 1.0000e+00 insignificant 2.3906e-03 9.7399e-01 weaklyHypermeth 3.9844e-02 1.0000e+00 weaklyHypermeth 0.0359439 9.7086e-02 insignificant 8.4423e-01 insignificant 0.138412 0.1470588 -0.00644591 12 0.155632 0.215717 -0.06008511 1.0662e-01 3.1244e-02 weaklyHypometh 4.8907e-01 1.0000e+00 insignificant 4.0324e-02 1.8959e-01 inconclusive 2.4154e-01 1.0000e+00 insignificant -0.0394855 3.3605e-01 insignificant 1.0000e+00 insignificant 0.138540 0.0852632 0.06052289 11 0.166748 0.088314 7.8434e-02 5.2912e-04 9.9986e-01 weaklyHypermeth 7.3488e-03 1.000000 weaklyHypermeth 8.9496e-05 0.99945702 weaklyHypermeth 2.3551e-03 1.00000 weaklyHypermeth 0.08742090 9.7753e-03 weaklyHypermeth 2.1723e-01 insignificant 0.1471405 0.0852632 0.0684776 11 0.231125 0.088314 1.4281e-01 1.5558e-04 9.9162e-01 weaklyHypermeth 1.7287e-02 1.0000e+00 weaklyHypermeth 4.5932e-03 9.9746e-01 weaklyHypermeth 5.5366e-01 1.0000e+00 insignificant 0.1269064 5.9290e-03 weaklyHypermeth 0.09278274 weaklyHypermeth chr1 10839135 10840135 451 CASZ1 ENSG00000130940 0.869910 447 10 0.888465 265 10 0.879121 111 8 0.9180531 436 10 0.797683 146 10 0.8557264 324 10 0.8839986 125 10 0.950092 207 10 0.901818 52 8 0.906366 170 8 0.8884589 247 10 0.770779 88 8 0.967544 142 8 0.803030 88 8 0.836131 104 10 0.972222 59 7 NA 0 0 0.8571802 848 10 0.942022 452 10 0.9419506 330 10 0.910023 107 8 0.928377 174 8 0.912225 186 10 0.831818 33 1 0.9465509 608 10 0.9341702 314 10 0.882778 109 9 0.8909091 45 1 0.862369 384 10 0.944797 304 10 0.921955 288 10 0.934703 297 10 0.7428796 234 10 0.8570497 227 10 0.5387097 68 3 0.7963627 436 10 0.6346189 99 10 0.8637747 336 10 0.8501193 280 10 0.913551 269 10 0.8595128 379 10 0.8336601 633 8 0.872838 290 10 0.877128 0.885734 0.874333 0.9334820 0.8698641 0.857399 0.8742663 0.9495441 0.8980762 0.9059840 0.9016161 0.7876273 0.9671326 0.863825 0.8752479 0.95228953 NA 0.8701277 0.9544236 0.939035 0.888044 0.9194832 0.922459 0.8740098 0.938048 0.9364716 0.902190 0.8367811 0.887535 0.955125 0.926478 0.935494 0.7635284 0.8605881 0.5333958 0.8298747 0.7247758 0.8658557 0.8794068 0.924804 0.897654 0.8625680 0.903407 6 0.891309 0.921644 -0.02879970 10 0.739701 0.930368 -0.19066709 0.9790880 0.13744332 insignificant 1 1.00000 insignificant 0.9909045 0.2064697 insignificant 1 1.00000 insignificant -0.02257104 0.1841243 insignificant 1 insignificant 0.891694 0.7962831 0.0922369 10 0.887641 0.785938 0.10170298 6.2700e-09 9.9296e-01 weaklyHypermeth 5.9714e-08 1.0000e+00 weaklyHypermeth 6.1179e-05 9.9641e-01 weaklyHypermeth 7.5530e-04 1.0000e+00 weaklyHypermeth 0.1469192 3.8034e-02 weaklyHypermeth 2.7966e-01 insignificant 0.891694 0.8800648 0.0103972 10 0.887641 0.865683 0.02195843 3.2440e-02 4.0081e-01 weaklyHypermeth 3.0318e-01 1.0000e+00 insignificant 8.3238e-02 6.8302e-01 insignificant 8.2414e-01 1.0000e+00 insignificant 0.0198822 3.1046e-01 insignificant 1.0000e+00 insignificant 0.921534 0.7962831 0.12295752 10 0.916442 0.785938 0.13050350 4.1401e-07 9.9958e-01 weaklyHypermeth 4.0991e-06 1.0000e+00 weaklyHypermeth 3.8035e-04 9.9992e-01 weaklyHypermeth 4.1342e-03 1.0000e+00 weaklyHypermeth 0.1694903 2.3033e-02 weaklyHypermeth 2.0301e-01 insignificant 0.921534 0.8800648 0.03784670 10 0.916442 0.865683 5.0759e-02 1.3070e-02 4.2273e-01 weaklyHypermeth 1.3070e-01 1.000000 insignificant 8.7850e-04 0.87035790 weaklyHypermeth 1.8302e-02 1.00000 weaklyHypermeth 0.04245322 3.3847e-02 weaklyHypermeth 4.7461e-01 insignificant 0.7962831 0.8800648 -0.0826338 10 0.785938 0.865683 -7.9745e-02 9.9477e-01 1.0705e-02 weaklyHypometh 1.0000e+00 8.0487e-02 weaklyHypometh 9.7848e-01 2.2213e-02 weaklyHypometh 1.0000e+00 2.0392e-01 insignificant -0.1270371 6.1449e-02 insignificant 0.51562704 insignificant chr1 10880664 10881664 458 ENSG00000217499 0.730277 171 8 0.638476 145 6 0.706984 205 8 0.8521215 136 5 0.733392 81 5 0.7532430 287 8 0.7670940 106 8 0.665286 147 6 0.753430 149 6 0.843244 142 7 0.7667933 235 8 0.547164 103 7 0.520404 203 7 0.807720 63 3 0.651355 167 6 0.493021 111 7 0.338690 49 6 0.4557204 156 8 0.474028 167 7 0.7036206 204 8 0.649898 87 6 0.502205 149 7 0.658243 160 8 0.644212 112 8 0.6779040 79 5 0.7434718 157 8 0.641075 161 7 0.8229167 96 4 0.477739 90 5 0.648164 184 7 0.593147 221 8 0.746641 221 8 0.4873830 130 8 0.4172359 122 6 0.4928334 458 5 0.2916667 78 6 0.4172629 128 7 0.2071341 168 8 0.5448050 124 8 0.667594 134 7 0.6770600 108 6 0.4857741 151 8 0.614632 161 8 0.740622 0.670135 0.723277 0.8790428 0.6984220 0.798909 0.7859391 0.6960233 0.7549171 0.7992607 0.7972347 0.5983637 0.5793861 0.699822 0.6846383 0.53765042 0.426852 0.4599617 0.5844437 0.714214 0.729791 0.5387763 0.658965 0.6725646 0.679833 0.7286668 0.706113 0.8065584 0.634826 0.735471 0.602547 0.793276 0.4945663 0.4764366 0.4335125 0.2851986 0.5454324 0.2588354 0.5356730 0.593512 0.646161 0.4465019 0.574239 4 0.707672 0.693069 0.00307662 8 0.667256 0.668169 -0.00091377 0.7122107 0.72254702 insignificant 1 1.00000 insignificant 0.6854749 0.6178028 insignificant 1 1.00000 insignificant 0.00963504 0.8221417 insignificant 1 insignificant 0.707962 0.4136657 0.3098722 8 0.704227 0.354395 0.34983202 8.5502e-22 1.0000e+00 hypermethylated 2.0854e-20 1.0000e+00 hypermethylated 1.0330e-08 1.0000e+00 hypermethylated 2.4595e-07 1.0000e+00 hypermethylated 0.2745172 6.0098e-04 hypermethylated 1.1784e-02 hypermethylated 0.707672 0.4970501 0.1468634 8 0.667256 0.594412 0.07284356 3.4523e-05 1.1244e-01 weaklyHypermeth 6.0566e-04 1.0000e+00 weaklyHypermeth 2.7526e-03 1.0585e-01 weaklyHypermeth 4.5125e-02 1.0000e+00 weaklyHypermeth 0.0621302 2.2701e-01 insignificant 1.0000e+00 insignificant 0.693069 0.4138889 0.30898944 8 0.668169 0.357028 0.31114146 7.5141e-17 1.0000e+00 hypermethylated 1.9774e-15 1.0000e+00 hypermethylated 2.9978e-08 1.0000e+00 hypermethylated 7.4944e-07 1.0000e+00 hypermethylated 0.2648822 9.2436e-04 hypermethylated 1.4672e-02 hypermethylated 0.693069 0.4970501 0.14974141 8 0.668169 0.594412 7.3757e-02 1.5275e-04 4.1354e-01 weaklyHypermeth 2.4246e-03 1.000000 weaklyHypermeth 5.1291e-03 0.29629430 weaklyHypermeth 8.0143e-02 1.00000 weaklyHypermeth 0.05249515 2.8439e-01 insignificant 1.0000e+00 insignificant 0.4138889 0.4970501 -0.1274850 8 0.357028 0.594412 -2.3738e-01 9.9722e-01 5.2177e-08 weaklyHypometh 1.0000e+00 1.2726e-06 weaklyHypometh 9.9986e-01 2.2870e-04 weaklyHypometh 1.0000e+00 4.9718e-03 weaklyHypometh -0.2123870 5.9381e-03 weaklyHypometh 0.09278274 weaklyHypometh chr1 10882699 10883699 459 ENSG00000217499 0.545664 226 7 0.415853 127 5 0.511482 145 5 0.6877311 204 9 0.418975 74 7 0.6020435 201 7 0.4291005 116 5 0.548336 160 5 0.417408 136 5 0.292246 125 5 0.6475370 140 7 0.323312 82 5 0.485254 141 5 0.800000 5 0 0.254337 79 5 0.300000 22 2 0.066209 79 5 0.4974740 266 8 0.272353 102 5 0.3908247 145 5 0.695861 96 7 0.458310 130 7 0.541271 139 5 0.288176 54 4 0.6607192 181 9 0.6253200 134 7 0.631432 93 7 0.6730849 62 4 0.327778 73 5 0.591458 157 5 0.419503 153 5 0.552062 258 7 0.5940363 167 5 0.6957607 118 9 0.5000000 177 5 0.6277778 65 9 0.4864544 82 6 0.8077027 168 9 0.6343232 251 9 0.604303 243 9 0.6081315 211 7 0.6333755 205 5 0.564728 176 7 0.434478 0.370823 0.378483 0.4618861 0.2400934 0.487838 0.3892910 0.3360956 0.2671384 0.3175304 0.4104092 0.1779172 0.2430700 NA 0.3874127 0.29777778 0.077637 0.3732883 0.0979500 0.257136 0.583425 0.3083744 0.382464 0.1598336 0.593729 0.5461506 0.480093 0.3732901 0.344691 0.452454 0.334467 0.538824 0.4533022 0.4537335 0.2800000 0.5830617 0.4667103 0.6471854 0.3672641 0.399158 0.361706 0.3231063 0.355276 5 0.385392 0.508175 -0.09409131 5 0.514546 0.606175 -0.09162914 0.9999097 0.00181392 weaklyHypometh 1 0.26922 insignificant 0.9997489 0.0059557 weaklyHypometh 1 0.74446 insignificant -0.09344093 0.0998343 insignificant 1 insignificant 0.385243 0.5418275 -0.1333973 5 0.471667 0.586952 -0.11528456 9.4237e-01 1.6378e-07 weaklyHypometh 1.0000e+00 4.0946e-05 weaklyHypometh 9.9558e-01 1.0997e-04 weaklyHypometh 1.0000e+00 3.6655e-02 weaklyHypometh -0.1733150 1.7532e-02 weaklyHypometh 1.5362e-01 insignificant 0.385214 0.4244936 -0.0285884 5 0.478182 0.658432 -0.18025006 8.3056e-01 1.1868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7987e-01 3.4100e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1636652 5.0793e-04 weaklyHypometh 2.4187e-02 weaklyHypometh 0.508175 0.5419355 -0.03306297 7 0.606175 0.594856 0.01131871 3.0111e-01 4.8526e-04 weaklyHypometh 1.0000e+00 1.2131e-01 insignificant 7.8971e-01 4.9307e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0798741 2.3297e-01 insignificant 1.0000e+00 insignificant 0.508197 0.4239631 0.05738683 7 0.616792 0.624275 -7.4830e-03 1.2844e-01 6.3782e-01 insignificant 9.2240e-01 1.000000 insignificant 5.8343e-01 0.46001487 insignificant 1.0000e+00 1.00000 insignificant -0.07022423 1.1335e-01 insignificant 1.0000e+00 insignificant 0.5419355 0.4244936 0.0947258 7 0.594856 0.658432 -6.3576e-02 2.1542e-03 9.1785e-01 weaklyHypermeth 1.3005e-01 1.0000e+00 insignificant 4.9912e-02 9.3251e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0096499 8.5720e-01 insignificant 1.00000000 insignificant chr1 10884052 10885052 460 ENSG00000217499 0.354041 274 7 0.286179 210 7 0.298150 217 7 0.4460504 303 7 0.137211 165 7 0.5188898 346 7 0.4236915 238 7 0.149160 230 7 0.315812 268 7 0.440258 172 5 0.3384616 235 7 0.306754 109 6 0.027012 168 6 0.558259 86 5 0.223391 203 6 0.072619 46 2 0.164583 80 3 0.3284298 323 7 0.176131 188 7 0.3309293 334 7 0.530643 99 8 0.340074 102 4 0.366068 190 7 0.317995 161 8 0.4762963 278 6 0.3581858 288 7 0.234354 238 7 0.1428571 85 5 0.361392 227 7 0.173616 355 7 0.337278 369 7 0.501769 272 7 0.3620145 246 7 0.3711986 238 7 0.6173500 105 4 0.1196163 173 7 0.5153046 190 9 0.3107577 311 7 0.2051498 369 7 0.322669 272 7 0.2838213 251 7 0.3832617 285 7 0.417929 295 7 0.365458 0.175978 0.335429 0.3977389 0.1377741 0.424739 0.2897254 0.1847321 0.2341231 0.3336863 0.3444603 0.3295445 0.0430899 0.416630 0.2294227 0.14481871 0.194614 0.2570104 0.0378607 0.282007 0.452234 0.1787954 0.331818 0.1716243 0.267912 0.2658453 0.146506 0.1477321 0.324066 0.206221 0.166949 0.433159 0.2625952 0.2069409 0.4316062 0.0901865 0.3425274 0.2511885 0.2187244 0.275927 0.309781 0.2567897 0.341235 5 0.287323 0.258647 0.01354160 7 0.465915 0.397253 0.06866146 0.2950231 0.96974806 insignificant 1 1.00000 insignificant 0.5809636 0.9540748 insignificant 1 1.00000 insignificant -0.05024340 0.2987613 insignificant 1 insignificant 0.286430 0.3578781 -0.0243551 7 0.439038 0.495519 -0.05648124 5.7339e-01 2.5451e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.1269e-01 2.0218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0879063 2.9083e-01 insignificant 1.0000e+00 insignificant 0.285714 0.2800816 0.0076177 7 0.320375 0.296584 0.02379122 2.3648e-01 3.6141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0455e-01 1.9610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0277656 5.8513e-01 insignificant 1.0000e+00 insignificant 0.258089 0.3577107 -0.06134488 7 0.342458 0.448843 -0.10638459 7.1474e-01 1.0151e-03 weaklyHypometh 1.0000e+00 1.7858e-01 insignificant 3.7826e-01 1.0182e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0376630 6.4423e-01 insignificant 1.0000e+00 insignificant 0.258568 0.2802721 -0.01757778 7 0.391287 0.296584 9.4703e-02 5.7077e-01 1.4049e-01 insignificant 1.0000e+00 1.000000 insignificant 5.4143e-01 0.21489488 insignificant 1.0000e+00 1.00000 insignificant 0.02247779 6.6904e-01 insignificant 1.0000e+00 insignificant 0.3552000 0.2800816 0.0656309 7 0.326363 0.296584 2.9780e-02 3.7499e-01 7.5070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9410e-01 3.9203e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0601407 4.7255e-01 insignificant 1.00000000 insignificant chr1 10898333 10899333 461 ENSG00000217499 0.624806 80 4 0.738627 234 5 0.870893 153 5 0.7678571 71 4 0.813651 97 5 0.8790383 147 5 0.9015262 136 5 0.824534 120 5 0.871844 83 5 0.933608 74 4 0.8750245 207 5 0.828571 37 4 0.903331 111 4 0.844518 67 4 0.859538 140 4 0.985714 25 1 0.981818 165 1 0.8213836 78 4 0.905546 108 5 0.8743341 103 4 0.881903 53 5 0.732353 38 4 0.778756 95 5 0.656291 63 4 0.8828571 44 5 0.8781460 252 5 0.760412 113 5 0.8407089 69 4 0.841517 141 5 0.854857 314 5 0.870703 210 5 0.684746 94 4 0.7035806 173 5 0.6484043 97 5 0.4104762 170 5 0.6666667 17 1 0.6610025 117 4 0.8542180 234 5 0.9051471 103 4 0.889441 91 4 0.9681818 62 4 0.9121739 67 5 0.797949 68 4 0.759795 0.804647 0.789076 0.7632315 0.6901415 0.819367 0.8588815 0.7905090 0.8017171 0.9110742 0.8441099 0.8020654 0.8713442 0.807134 0.7880754 0.96342513 NA 0.7816549 0.8820998 0.806492 0.853378 0.5791728 0.731809 0.7091849 0.850688 0.8852549 0.750438 0.8235966 0.852828 0.830110 0.826394 0.835144 0.6334386 0.5921842 0.2236087 0.5020080 0.6420675 0.8329275 0.8006511 0.845169 0.918538 0.8474332 0.859457 2 0.832662 0.830417 0.00941643 4 0.893368 0.855178 0.03819081 0.6191847 0.92305836 lowCoverage 1 1.00000 lowCoverage 0.1567105 0.9949517 lowCoverage 1 1.00000 lowCoverage 0.05003750 0.1037318 lowCoverage 1 lowCoverage 0.832512 0.6522277 0.2063332 4 0.850716 0.696000 0.15471601 3.6578e-05 9.9607e-01 lowCoverage 2.6315e-04 1.0000e+00 lowCoverage 9.0126e-04 9.9870e-01 lowCoverage 8.0470e-03 1.0000e+00 lowCoverage 0.1979169 1.7655e-02 lowCoverage 1.5362e-01 lowCoverage 0.832512 0.8414322 -0.0129921 4 0.850716 0.892421 -0.04170530 9.6124e-01 2.8252e-02 lowCoverage 1.0000e+00 9.3647e-01 lowCoverage 9.7769e-01 4.5701e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0392702 2.6938e-01 lowCoverage 1.0000e+00 lowCoverage 0.830048 0.6522277 0.18253696 5 0.841693 0.696000 0.14569332 1.2515e-03 9.9514e-01 weaklyHypermeth 7.7730e-03 1.0000e+00 weaklyHypermeth 1.8671e-02 9.7205e-01 weaklyHypermeth 1.2702e-01 1.0000e+00 insignificant 0.1478794 5.2598e-02 lowCoverage 3.7570e-01 lowCoverage 0.830048 0.8414322 -0.02271539 4 0.841693 0.892421 -5.0728e-02 9.8565e-01 3.7085e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9787e-01 0.00537863 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.08930771 3.2966e-02 lowCoverage 4.7461e-01 lowCoverage 0.6522277 0.8414322 -0.2302355 4 0.696000 0.892421 -1.9642e-01 9.9948e-01 3.2384e-03 lowCoverage 1.0000e+00 2.7444e-02 lowCoverage 9.9993e-01 2.0783e-03 lowCoverage 1.0000e+00 3.1974e-02 lowCoverage -0.2371871 7.8016e-03 lowCoverage 0.11145131 lowCoverage chr1 10919691 10920691 462 ENSG00000217499 0.631070 246 12 0.674274 238 7 0.646338 248 11 0.6137368 358 12 0.616980 145 10 0.7570635 400 12 0.6633561 152 9 0.574970 304 9 0.560689 283 10 0.573083 139 8 0.7785382 272 8 0.527205 96 7 0.522763 200 9 0.567173 175 8 0.620133 201 8 0.704857 95 7 0.000000 1 0 0.5872977 349 9 0.679783 153 7 0.5562713 206 6 0.763278 62 5 0.619553 61 7 0.706109 233 10 0.606944 90 7 0.6377684 139 10 0.5626491 370 11 0.700505 171 10 0.6648363 126 8 0.572068 253 8 0.595699 504 12 0.637736 401 11 0.899189 326 9 0.5844549 195 9 0.7634123 97 6 0.5416667 118 5 0.7509969 127 7 0.6111409 233 14 0.6277480 450 12 0.5387866 340 13 0.534347 438 11 0.5321485 372 11 0.5525641 280 12 0.509932 365 13 0.706017 0.674199 0.747064 0.7217143 0.7772795 0.878998 0.7082128 0.7969212 0.6772803 0.8418339 0.7354625 0.7703384 0.6008605 0.802808 0.7209245 0.89274756 NA 0.6936602 0.6997967 0.685037 0.764968 0.5070125 0.894942 0.6318689 0.760565 0.7799191 0.762854 0.7847151 0.687592 0.698946 0.696626 0.886800 0.6347131 0.8820761 0.5336069 0.8354620 0.7168386 0.8612989 0.7247835 0.744336 0.586327 0.6552778 0.606745 5 0.665806 0.671418 -0.01877538 8 0.531192 0.610327 -0.07913543 0.9123189 0.24375629 insignificant 1 1.00000 insignificant 0.9927230 0.1676026 insignificant 1 1.00000 insignificant -0.07108215 0.1192790 insignificant 1 insignificant 0.665962 0.6283839 0.0149487 8 0.562438 0.551435 0.01100268 3.4120e-01 5.0598e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9552e-01 8.9846e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0537908 3.0729e-01 insignificant 1.0000e+00 insignificant 0.665958 0.4534819 0.1070751 8 0.596226 0.553082 0.04314370 1.5695e-04 9.4624e-01 weaklyHypermeth 2.3080e-03 1.0000e+00 weaklyHypermeth 2.1266e-04 9.8163e-01 weaklyHypermeth 4.7258e-03 1.0000e+00 weaklyHypermeth 0.0592233 1.1156e-01 insignificant 9.4545e-01 insignificant 0.671915 0.6283839 0.03436669 9 0.622699 0.551435 0.07126373 1.2435e-01 2.7314e-01 insignificant 5.5515e-01 1.0000e+00 insignificant 9.4760e-01 3.4566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0172913 7.1422e-01 insignificant 1.0000e+00 insignificant 0.673326 0.4534819 0.14106902 9 0.629636 0.553082 7.6554e-02 4.1480e-05 7.0308e-01 weaklyHypermeth 7.5418e-04 1.000000 weaklyHypermeth 5.9168e-04 0.98582977 weaklyHypermeth 1.3148e-02 1.00000 weaklyHypermeth 0.13030549 5.4257e-04 weaklyHypermeth 2.5010e-02 weaklyHypermeth 0.6297837 0.4534819 0.0860768 11 0.599795 0.553082 4.6713e-02 1.3004e-04 8.4774e-01 weaklyHypermeth 1.6255e-02 1.0000e+00 weaklyHypermeth 2.2288e-03 9.9964e-01 weaklyHypermeth 3.7146e-01 1.0000e+00 insignificant 0.1130142 2.7549e-02 weaklyHypermeth 0.27771298 insignificant chr1 10924594 10925594 463 ENSG00000217499 0.202379 564 11 0.127771 620 14 0.229104 556 14 0.1809785 481 10 0.233973 301 14 0.2371109 768 13 0.1499645 583 14 0.160674 455 14 0.161796 671 14 0.232175 315 14 0.2149262 404 14 0.308400 535 14 0.155635 435 14 0.166667 12 2 0.201332 529 13 0.197376 376 13 0.145055 251 12 0.2388070 506 10 0.179531 338 12 0.1370223 630 14 0.230129 257 14 0.071455 312 12 0.228387 453 14 0.191069 274 14 0.1442578 229 11 0.1733466 707 14 0.187783 323 14 0.1934720 160 12 0.205381 451 11 0.174493 705 14 0.153641 626 14 0.294893 629 14 0.0279149 548 14 0.0466951 411 14 0.2083333 341 7 0.0333333 178 10 0.1438746 188 13 0.0521004 551 14 0.1616993 638 10 0.190866 685 11 0.0983772 480 10 0.1852665 607 10 0.137998 514 11 0.100815 0.065497 0.111717 0.0608286 0.1226638 0.114890 0.0875354 0.0824187 0.0612185 0.1143286 0.1092076 0.1660283 0.0357882 NA 0.0954488 0.10819883 0.036036 0.0758209 0.0546636 0.048166 0.128337 0.0274828 0.120684 0.0816993 0.052297 0.0625430 0.076789 0.0809838 0.086109 0.046985 0.040439 0.157706 0.0057565 0.0138476 0.0192383 0.0085343 0.0563932 0.0088572 0.0323395 0.039699 0.029511 0.0313726 0.042670 10 0.130118 0.129731 0.00237945 14 0.188371 0.187125 0.00124570 0.1423056 0.26926219 insignificant 1 1.00000 insignificant 0.1501432 0.5559019 insignificant 1 1.00000 insignificant 0.00567508 0.7633100 insignificant 1 insignificant 0.130118 0.0523230 0.1024398 14 0.188371 0.066738 0.12163283 3.1023e-18 1.0000e+00 weaklyHypermeth 5.8534e-17 1.0000e+00 weaklyHypermeth 1.1385e-12 1.0000e+00 weaklyHypermeth 5.1752e-11 1.0000e+00 weaklyHypermeth 0.1076586 1.4026e-02 weaklyHypermeth 1.3232e-01 insignificant 0.130118 0.0369357 0.0474843 10 0.188371 0.187115 0.00125640 4.1142e-06 2.8332e-02 weaklyHypermeth 9.1427e-05 9.3647e-01 weaklyHypermeth 1.2484e-06 5.0935e-01 weaklyHypermeth 4.3047e-05 1.0000e+00 weaklyHypermeth 0.0381925 9.3057e-02 insignificant 8.1629e-01 insignificant 0.129731 0.0523230 0.10118436 14 0.187125 0.066738 0.12038713 1.4724e-10 1.0000e+00 weaklyHypermeth 2.1034e-09 1.0000e+00 weaklyHypermeth 8.1020e-11 1.0000e+00 weaklyHypermeth 4.0510e-09 1.0000e+00 weaklyHypermeth 0.1019835 1.7351e-02 weaklyHypermeth 1.6065e-01 insignificant 0.129731 0.0369357 0.03968457 10 0.187125 0.187115 1.0700e-05 2.0515e-02 1.5650e-01 weaklyHypermeth 1.9726e-01 1.000000 insignificant 4.4922e-03 0.65637922 weaklyHypermeth 7.2043e-02 1.00000 weaklyHypermeth 0.03251742 1.8638e-01 insignificant 1.0000e+00 insignificant 0.0523230 0.0369357 -0.0272628 10 0.066738 0.187115 -1.2038e-01 9.9922e-01 1.6122e-07 weaklyHypometh 1.0000e+00 3.5048e-06 weaklyHypometh 9.9914e-01 7.7281e-05 weaklyHypometh 1.0000e+00 2.0455e-03 weaklyHypometh -0.0694661 8.0414e-02 insignificant 0.60919399 insignificant chr1 11018927 11019927 468 TARDBP ENSG00000120948 0.790349 365 14 0.747469 358 14 0.639197 188 14 0.8477743 248 13 0.841601 121 12 0.8161779 424 14 0.7726663 209 13 0.736267 237 14 0.802442 109 9 0.712612 176 13 0.7978778 489 14 0.741316 109 9 0.831318 290 13 0.750000 28 2 0.839080 251 14 0.617999 88 8 0.785679 117 11 0.8728505 243 14 0.860659 300 14 0.8309032 308 14 0.808063 92 11 0.776966 104 12 0.792059 298 14 0.822451 93 7 0.8607710 94 9 0.7580076 416 14 0.793888 179 13 0.6972070 66 6 0.824909 238 10 0.855977 469 14 0.795032 369 13 0.802277 564 14 0.7578554 266 10 0.7523826 265 14 0.7757323 309 14 0.7795777 127 12 0.7607916 92 7 0.7990913 492 14 0.8238773 371 13 0.847856 436 14 0.8722660 233 9 0.8306303 363 13 0.850377 344 12 0.807564 0.776722 0.661582 0.8638859 0.8556283 0.814988 0.7622974 0.7853289 0.8124082 0.7453970 0.8098427 0.7421155 0.8526886 NA 0.8467491 0.71926845 0.818814 0.9014878 0.8583259 0.832735 0.794559 0.7699590 0.777772 0.7941519 0.855663 0.8021825 0.800772 0.7479755 0.858240 0.887445 0.807149 0.819252 0.7439842 0.7453552 0.7959976 0.7771635 0.7512305 0.8221846 0.8462089 0.860652 0.871408 0.8520702 0.881572 4 0.801632 0.836016 -0.01053780 14 0.804668 0.818990 -0.01432144 0.9928364 0.34035814 insignificant 1 1.00000 insignificant 0.9937674 0.3572677 insignificant 1 1.00000 insignificant -0.01725537 0.3934661 insignificant 1 insignificant 0.801418 0.8091554 0.0302947 14 0.790716 0.768763 0.02195289 3.0448e-02 9.6715e-01 weaklyHypermeth 1.5224e-01 1.0000e+00 insignificant 1.3553e-01 9.1481e-01 insignificant 6.9862e-01 1.0000e+00 insignificant 0.0108068 5.3060e-01 insignificant 1.0000e+00 insignificant 0.801418 0.8105323 -0.0511065 13 0.790716 0.842991 -0.05227463 9.9999e-01 1.2610e-03 weaklyHypometh 1.0000e+00 1.5762e-01 insignificant 1.0000e+00 2.1811e-04 weaklyHypometh 1.0000e+00 6.4071e-02 weaklyHypometh -0.0632892 1.5659e-03 weaklyHypometh 5.3996e-02 weaklyHypometh 0.835961 0.8091554 0.04064028 14 0.806061 0.768763 0.03729729 8.6519e-03 9.9955e-01 weaklyHypermeth 4.8255e-02 1.0000e+00 weaklyHypermeth 9.2492e-02 9.8817e-01 insignificant 5.0268e-01 1.0000e+00 insignificant 0.0280622 7.0712e-02 insignificant 4.7141e-01 insignificant 0.835961 0.8105323 -0.04265078 13 0.806061 0.842991 -3.6930e-02 9.9827e-01 2.0353e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9757e-01 0.01913871 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.04603381 8.5040e-03 weaklyHypometh 2.0248e-01 insignificant 0.8091554 0.8105323 -0.0855621 13 0.768763 0.842991 -7.4228e-02 9.9998e-01 1.6374e-05 weaklyHypometh 1.0000e+00 2.6843e-04 weaklyHypometh 9.9998e-01 2.7550e-05 weaklyHypometh 1.0000e+00 8.1030e-04 weaklyHypometh -0.0740960 1.2696e-04 weaklyHypometh 0.00698728 weaklyHypometh chr1 11310833 11311833 477 ENSG00000218462 0.846254 180 12 0.853064 221 11 0.737306 140 8 0.8200235 275 12 0.735620 84 3 0.8390826 371 13 0.8253472 117 8 0.887932 193 9 0.780051 140 7 0.833310 121 5 0.7720321 353 13 0.825974 43 4 0.806343 151 5 0.911606 74 3 0.851161 103 5 0.750000 15 2 0.629630 19 0 0.8348352 144 8 0.752497 157 11 0.8217532 249 12 0.871561 66 6 0.655442 133 7 0.826197 175 10 0.717963 104 8 0.8595018 136 10 0.7877093 353 13 0.826749 85 5 0.7698413 47 3 0.698025 169 9 0.798691 303 13 0.723461 294 13 0.816916 369 13 0.4411874 225 11 0.4618715 121 9 0.4352310 303 11 0.5500000 78 3 0.5358477 161 8 0.4418201 282 13 0.8282192 170 9 0.717607 208 13 0.7236863 200 11 0.7494505 75 5 0.765628 258 11 0.845649 0.843906 0.826187 0.8621752 0.8574602 0.886457 0.8079053 0.9355974 0.8344489 0.8668884 0.8489922 0.7563927 0.8363193 0.807763 0.9431116 0.76644004 0.951375 0.7571416 0.8016760 0.870186 0.814867 0.6949847 0.830494 0.7429604 0.911740 0.8872538 0.793412 0.9322679 0.816945 0.847134 0.888761 0.917431 0.3551731 0.4214923 0.2919341 0.2983811 0.3928693 0.5484590 0.7777980 0.694161 0.635628 0.6910099 0.814353 1 0.844395 0.833035 0.00463536 11 0.830324 0.817696 0.01262820 0.3024685 0.95962181 insignificant 1 1.00000 insignificant 0.1495058 0.9798433 insignificant 1 1.00000 insignificant 0.02635286 0.2859134 insignificant 1 insignificant 0.844019 0.4324786 0.4026220 11 0.813836 0.481746 0.33208945 1.7233e-46 1.0000e+00 hypermethylated 1.3256e-44 1.0000e+00 hypermethylated 1.2748e-15 1.0000e+00 hypermethylated 1.1404e-13 1.0000e+00 hypermethylated 0.3280314 1.4176e-07 hypermethylated 6.4438e-06 hypermethylated 0.844019 0.7398463 0.1012420 10 0.813836 0.755959 0.05787713 8.9448e-10 4.3170e-01 weaklyHypermeth 3.0844e-08 1.0000e+00 weaklyHypermeth 5.8251e-06 8.4072e-01 weaklyHypermeth 1.7133e-04 1.0000e+00 weaklyHypermeth 0.0487727 7.7670e-02 insignificant 7.3274e-01 insignificant 0.832585 0.4324786 0.38907001 13 0.789649 0.481746 0.30790306 1.1994e-27 9.9998e-01 hypermethylated 5.4517e-26 1.0000e+00 hypermethylated 3.0566e-11 1.0000e+00 hypermethylated 1.6088e-09 1.0000e+00 hypermethylated 0.3016785 1.0464e-07 hypermethylated 5.5075e-06 hypermethylated 0.832585 0.7398463 0.09172369 10 0.789649 0.755959 3.3691e-02 2.0511e-05 5.9456e-02 weaklyHypermeth 3.9443e-04 1.000000 weaklyHypermeth 4.5648e-04 0.55479623 weaklyHypermeth 1.0375e-02 1.00000 weaklyHypermeth 0.02241985 4.3642e-01 insignificant 1.0000e+00 insignificant 0.4324786 0.7398463 -0.2995928 10 0.481746 0.755959 -2.7421e-01 1.0000e+00 8.9468e-13 hypomethylated 1.0000e+00 3.8899e-11 hypomethylated 1.0000e+00 1.5314e-07 hypomethylated 1.0000e+00 1.0210e-05 hypomethylated -0.2792587 4.8712e-06 hypomethylated 0.00121780 hypomethylated chr1 11608852 11609852 490 PTCHD2 ENSG00000204624 0.714378 221 5 0.708880 155 5 0.598228 113 5 0.8089134 122 5 0.584945 63 5 0.6155278 316 5 0.7402500 108 5 0.630876 112 5 0.678489 102 5 0.677886 84 5 0.6771863 187 5 0.763114 88 5 0.636094 103 5 0.750000 4 0 0.757736 89 5 0.593077 52 5 0.557032 98 6 0.7286861 119 5 0.624932 139 5 0.7031941 232 5 0.916667 41 3 0.723137 66 5 0.608426 139 5 0.859615 54 4 0.7568254 40 4 0.7566403 145 5 0.917949 47 3 0.8774351 56 5 0.661250 89 5 0.761083 153 5 0.752221 154 5 0.614884 261 5 0.5005068 116 5 0.4196562 81 5 0.4608557 160 6 0.5922619 38 5 0.6967427 90 4 0.5157051 119 5 0.7923314 155 5 0.598862 194 5 0.7460091 165 5 0.7435304 231 5 0.611447 145 6 0.822206 0.803680 0.676493 0.8720349 0.7035597 0.787097 0.8255036 0.7273952 0.7829878 0.7740985 0.7777481 0.8468664 0.7583419 NA 0.8560159 0.68893547 0.824597 0.8276810 0.7745049 0.804169 0.930490 0.8304456 0.863601 0.8744076 0.817784 0.7948719 0.891785 0.8973657 0.804295 0.817315 0.789685 0.851961 0.6118507 0.4902864 0.3828758 0.6674566 0.7375876 0.5988881 0.8633755 0.854774 0.856855 0.8599687 0.854931 4 0.723574 0.785772 -0.04101191 5 0.649360 0.697080 -0.04771960 0.9945070 0.03116910 weaklyHypometh 1 0.98514 insignificant 0.9966887 0.0657360 insignificant 1 1.00000 insignificant -0.08970653 0.0198599 lowCoverage 1 lowCoverage 0.723464 0.5511945 0.2253143 5 0.599269 0.634977 -0.03570833 1.8551e-09 9.2941e-01 hypermethylated 1.9125e-08 1.0000e+00 hypermethylated 2.0983e-04 9.8149e-01 hypermethylated 2.2323e-03 1.0000e+00 hypermethylated 0.1465165 1.3352e-02 lowCoverage 1.3232e-01 lowCoverage 0.723464 0.7676538 -0.0570671 5 0.599269 0.601728 -0.00245987 9.6608e-01 3.8895e-03 weaklyHypometh 1.0000e+00 3.5359e-01 insignificant 9.9282e-01 2.3471e-03 weaklyHypometh 1.0000e+00 3.5961e-01 insignificant -0.0209648 6.3845e-01 lowCoverage 1.0000e+00 lowCoverage 0.787440 0.5397351 0.26904306 5 0.738746 0.576438 0.16230814 6.9531e-10 9.9606e-01 hypermethylated 9.2708e-09 1.0000e+00 hypermethylated 1.3368e-05 9.9925e-01 hypermethylated 2.1914e-04 1.0000e+00 hypermethylated 0.2362230 7.7651e-04 lowCoverage 1.3388e-02 lowCoverage 0.787440 0.7640449 -0.01479996 5 0.738746 0.589012 1.4973e-01 2.9129e-01 1.7037e-01 insignificant 1.0000e+00 1.000000 insignificant 5.7765e-01 0.37386063 insignificant 1.0000e+00 1.00000 insignificant 0.06874170 2.0120e-01 lowCoverage 1.0000e+00 lowCoverage 0.5397351 0.7640449 -0.2874586 5 0.576438 0.589012 -1.2574e-02 9.9964e-01 2.9719e-05 hypomethylated 1.0000e+00 4.4535e-04 hypomethylated 9.9964e-01 7.9776e-05 hypomethylated 1.0000e+00 2.0455e-03 hypomethylated -0.1674813 1.5869e-02 weaklyHypometh 0.18669294 insignificant chr1 11616914 11617914 491 PTCHD2 ENSG00000204624 0.759476 252 5 0.807414 201 5 0.695423 172 6 0.9180730 191 4 0.836700 56 4 0.7273364 244 5 0.7294424 121 4 0.924097 154 4 0.864730 143 4 0.869658 128 4 0.8923231 172 6 0.672222 28 3 0.820420 158 4 1.000000 2 0 0.821538 98 4 0.691667 29 4 0.628530 73 4 0.7337526 211 6 0.915987 148 5 0.8627439 222 4 0.904762 71 5 0.769088 105 5 0.709077 199 5 0.893939 99 6 0.8319444 77 6 0.9133091 234 4 0.744409 114 6 0.8403704 88 4 0.917375 177 4 0.864963 240 6 0.879294 250 4 0.921984 252 4 0.7139652 221 4 0.6167667 128 4 0.5593651 116 6 0.6091880 42 4 0.5264607 145 6 0.6480738 260 6 0.7274494 205 5 0.624182 298 5 0.6011811 222 4 0.5877426 270 5 0.696154 274 5 0.902031 0.857606 0.839647 0.8694952 0.7840370 0.846047 0.8133922 0.8920791 0.7925923 0.8778490 0.8888639 0.7193732 0.8176645 NA 0.7961538 0.69017094 0.681928 0.7676526 0.9100640 0.866037 0.936610 0.6448346 0.895083 0.9103643 0.816168 0.8638157 0.777291 0.9109212 0.862778 0.851068 0.875347 0.909298 0.5266183 0.3912008 0.3709402 0.6204653 0.5470085 0.5467828 0.6762618 0.685991 0.696022 0.7041411 0.701820 4 0.837317 0.865334 -0.02722768 4 0.806440 0.855315 -0.04887451 0.9854667 0.05595115 lowCoverage 1 1.00000 lowCoverage 0.9662358 0.1300144 lowCoverage 1 1.00000 lowCoverage -0.04063294 0.1947303 lowCoverage 1 lowCoverage 0.837317 0.5427632 0.3143936 4 0.806440 0.575535 0.23090535 9.4910e-17 9.9998e-01 lowCoverage 1.5818e-15 1.0000e+00 lowCoverage 2.3481e-06 9.9689e-01 lowCoverage 3.9883e-05 1.0000e+00 lowCoverage 0.1962734 9.4666e-05 lowCoverage 2.3666e-03 lowCoverage 0.837317 0.6832151 0.1535409 4 0.806440 0.639672 0.16676874 2.9545e-12 9.9962e-01 lowCoverage 1.3014e-10 1.0000e+00 lowCoverage 9.7130e-07 9.9998e-01 lowCoverage 3.5974e-05 1.0000e+00 lowCoverage 0.1612350 1.0048e-03 lowCoverage 4.0110e-02 lowCoverage 0.865334 0.5427632 0.33387922 5 0.855315 0.575535 0.27977986 1.1633e-15 1.0000e+00 hypermethylated 2.6438e-14 1.0000e+00 hypermethylated 2.3042e-08 9.9616e-01 hypermethylated 6.2276e-07 1.0000e+00 hypermethylated 0.2369064 2.4344e-05 lowCoverage 8.3946e-04 lowCoverage 0.865334 0.6832151 0.17549911 5 0.855315 0.639672 2.1564e-01 2.2631e-12 1.0000e+00 weaklyHypermeth 1.5087e-10 1.000000 weaklyHypermeth 1.1959e-07 1.00000000 weaklyHypermeth 8.5424e-06 1.00000 weaklyHypermeth 0.20186793 2.5093e-04 lowCoverage 1.5683e-02 lowCoverage 0.5427632 0.6832151 -0.1725842 5 0.575535 0.639672 -6.4137e-02 6.1650e-01 1.3522e-03 weaklyHypometh 1.0000e+00 1.3382e-02 weaklyHypometh 6.0938e-01 1.3737e-02 weaklyHypometh 1.0000e+00 1.3737e-01 insignificant -0.0350385 3.8625e-01 lowCoverage 1.00000000 lowCoverage chr1 11635377 11636377 495 PTCHD2 ENSG00000204624 0.576542 200 6 0.535667 153 6 0.598434 100 6 0.6540424 215 6 0.424691 59 5 0.6565128 271 6 0.6073232 89 6 0.589923 132 6 0.634045 107 6 0.408425 97 5 0.6348705 228 6 0.459253 53 5 0.666670 148 5 0.820000 30 2 0.649005 100 5 0.542857 38 3 0.606481 40 5 0.4454334 257 6 0.684359 163 6 0.7050840 190 6 0.580303 70 6 0.461660 137 5 0.504234 176 6 0.362119 92 5 0.6466327 68 4 0.6666229 206 6 0.448941 134 4 0.1547619 47 4 0.730621 151 6 0.715888 196 6 0.667402 218 6 0.603904 255 6 0.5236970 130 6 0.4178085 154 6 0.6033268 133 4 0.4069521 54 6 0.7318809 93 6 0.6492754 227 6 0.6626392 150 6 0.469901 216 6 0.5860821 187 6 0.6332792 215 6 0.555588 198 6 0.516173 0.520587 0.569630 0.5961401 0.4536148 0.598924 0.5754433 0.5803627 0.6162716 0.5068306 0.6183364 0.5035872 0.6879031 0.548206 0.6176184 0.52838428 0.541101 0.4847617 0.6698287 0.654250 0.480753 0.4847253 0.435899 0.4246296 0.591046 0.5782284 0.487920 0.1644833 0.681569 0.697693 0.583024 0.549567 0.5383143 0.4302393 0.7075017 0.2994519 0.7729932 0.7483988 0.5977172 0.442369 0.523022 0.5608490 0.495222 4 0.601650 0.565714 0.03229186 6 0.571786 0.505661 0.06612493 0.1251166 0.99406745 insignificant 1 1.00000 insignificant 0.1244433 0.9987848 insignificant 1 1.00000 insignificant 0.04972366 0.3689025 insignificant 1 insignificant 0.601577 0.5929204 0.0088680 6 0.558232 0.610578 -0.05234610 4.4213e-08 1.5286e-03 weaklyHypermeth 4.0193e-07 1.5286e-01 weaklyHypermeth 5.0688e-03 2.7093e-02 weaklyHypermeth 3.6730e-02 1.0000e+00 weaklyHypermeth 0.0394909 5.1614e-01 insignificant 1.0000e+00 insignificant 0.601650 0.4585921 0.0506451 6 0.571786 0.559553 0.01223293 2.8860e-02 5.1713e-01 weaklyHypermeth 2.7486e-01 1.0000e+00 insignificant 1.9550e-01 7.4366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0134831 7.4810e-01 insignificant 1.0000e+00 insignificant 0.565940 0.5924051 0.00443969 6 0.574215 0.545674 0.02854074 1.4098e-03 1.0715e-03 weaklyHypermeth 8.6492e-03 1.7858e-01 weaklyHypermeth 3.4230e-02 1.3315e-02 weaklyHypermeth 2.1528e-01 1.0000e+00 insignificant -0.0102327 8.8906e-01 insignificant 1.0000e+00 insignificant 0.565714 0.4585921 0.01940114 6 0.505661 0.559553 -5.3892e-02 2.5608e-01 6.1644e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3157e-01 0.43557566 insignificant 1.0000e+00 1.00000 insignificant -0.03624052 5.4860e-01 insignificant 1.0000e+00 insignificant 0.5924051 0.4579439 0.0255411 6 0.545674 0.579404 -3.3730e-02 1.4013e-02 1.2942e-02 weaklyHypermeth 5.6052e-01 9.5160e-02 weaklyHypermeth 2.6703e-02 1.0552e-01 weaklyHypermeth 1.0000e+00 6.9367e-01 insignificant -0.0260078 6.8886e-01 insignificant 1.00000000 insignificant chr1 11869575 11870575 498 ENSG00000220120 0.933675 282 7 0.814661 190 8 0.811515 203 8 0.8822316 352 8 0.685943 140 7 0.9213042 348 8 0.6627892 136 8 0.788737 226 7 0.853572 170 7 0.937525 235 7 0.9192317 334 8 0.835209 107 7 0.817397 289 7 0.942029 180 7 0.836711 298 7 0.511601 112 5 0.809524 21 1 0.8228144 377 7 0.774635 251 7 0.9083888 280 8 0.762569 105 7 0.885563 138 7 0.876180 180 8 0.896830 125 7 0.8436147 84 6 0.6963730 257 8 0.823876 212 8 0.8375299 126 7 0.844553 220 7 0.915677 248 8 0.935042 201 7 0.944789 320 8 0.6087901 194 7 0.5915650 132 7 0.4624023 240 6 0.7380952 42 4 0.2724541 284 8 0.8567728 174 8 0.8501937 205 8 0.892475 315 8 0.9416560 284 8 0.8581665 225 7 0.811569 327 8 0.943708 0.799617 0.778380 0.8898527 0.8574812 0.948443 0.7956042 0.9029915 0.8177937 0.9388716 0.9232145 0.8401142 0.8333399 0.915787 0.8775916 0.61024306 0.783558 0.8988965 0.8737658 0.919882 0.843802 0.8729062 0.873157 0.9007337 0.887471 0.9345702 0.916263 0.8974068 0.881165 0.913402 0.921338 0.933692 0.4433361 0.4738599 0.4078568 0.7567963 0.2587663 0.8769840 0.8430982 0.883877 0.936075 0.9194546 0.830251 6 0.879055 0.900722 -0.02390337 7 0.796895 0.692134 0.10476062 0.9512254 0.32084825 insignificant 1 1.00000 insignificant 0.8849136 0.3943156 insignificant 1 1.00000 insignificant -0.03174169 0.3227343 insignificant 1 insignificant 0.879002 0.4512195 0.4208735 7 0.776584 0.432538 0.34404676 3.3596e-22 1.0000e+00 hypermethylated 8.3991e-21 1.0000e+00 hypermethylated 2.0002e-05 9.9969e-01 hypermethylated 2.7780e-04 1.0000e+00 hypermethylated 0.2351281 3.6618e-02 weaklyHypermeth 2.7327e-01 insignificant 0.880399 0.8834808 -0.0075594 7 0.863588 0.875251 -0.01166362 8.2274e-01 6.2890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4849e-01 4.1964e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0473373 1.6451e-01 insignificant 1.0000e+00 insignificant 0.901084 0.4512195 0.44600752 8 0.711348 0.432538 0.27881008 3.2294e-15 1.0000e+00 hypermethylated 6.7278e-14 1.0000e+00 hypermethylated 9.1133e-05 9.9995e-01 hypermethylated 1.2836e-03 1.0000e+00 hypermethylated 0.2668698 2.3219e-02 weaklyHypermeth 2.0301e-01 insignificant 0.902715 0.8834808 0.01935921 8 0.889185 0.875251 1.3933e-02 2.2093e-01 9.2045e-01 insignificant 1.0000e+00 1.000000 insignificant 2.0496e-01 0.92187719 insignificant 1.0000e+00 1.00000 insignificant -0.01559563 6.1475e-01 insignificant 1.0000e+00 insignificant 0.4520677 0.8834808 -0.4149875 8 0.540672 0.875251 -3.3458e-01 1.0000e+00 1.1723e-07 hypomethylated 1.0000e+00 2.6052e-06 hypomethylated 9.9922e-01 1.3488e-03 weaklyHypometh 1.0000e+00 2.2860e-02 weaklyHypometh -0.2824654 1.8647e-02 weaklyHypometh 0.21189470 insignificant chr1 12531117 12532117 527 ENSG00000209463 0.878483 126 7 0.865385 97 7 0.414861 121 7 0.7771767 103 9 0.783333 45 4 0.9034985 190 11 0.6250000 16 1 0.954861 68 6 0.812500 22 1 0.930037 54 4 0.8791200 188 11 0.283333 10 1 0.830251 118 8 0.976190 32 5 0.848958 31 1 0.833333 5 0 0.607143 9 1 0.7506466 198 10 0.904845 173 8 0.8352591 166 9 0.750085 74 7 0.283333 10 1 0.763403 70 6 1.000000 33 2 0.7666667 36 2 0.8750000 109 7 0.764214 142 9 0.3928571 15 1 0.721575 223 8 0.745382 145 7 0.922343 235 8 0.928920 127 9 0.1958021 264 12 0.2766729 142 7 0.2175000 312 10 0.9333333 11 2 0.2987862 140 9 0.6971314 296 12 0.7343519 86 6 0.914202 144 9 0.9821429 70 6 0.7330375 80 8 0.715972 87 10 0.946524 0.977273 0.588307 0.9168831 1.0000000 0.962882 1.0000000 0.9772727 0.9772727 0.9909091 0.8106061 0.7575758 0.8686869 NA 0.8627012 0.96969697 0.694805 0.6473829 0.9763376 0.935447 0.772727 0.7575758 0.958678 1.0000000 0.969697 1.0000000 0.854978 0.8701299 0.846151 0.902597 0.952153 0.899463 0.0356506 0.0000000 0.0254545 0.2714055 0.0777778 0.8254174 0.7707071 0.787879 0.886364 0.7995338 0.954545 0 0.869762 0.891736 -0.01493189 9 0.799559 0.792090 0.00746968 0.9336018 0.65860011 insignificant 1 1.00000 insignificant 0.8881960 0.8552780 insignificant 1 1.00000 insignificant 0.04189568 0.5696818 insignificant 1 insignificant 0.869270 0.2740550 0.6172658 9 0.749587 0.274363 0.47522418 8.8707e-37 1.0000e+00 hypermethylated 4.0321e-35 1.0000e+00 hypermethylated 6.8855e-12 1.0000e+00 hypermethylated 2.9937e-10 1.0000e+00 hypermethylated 0.3481731 3.7021e-02 weaklyHypermeth 2.7423e-01 insignificant 0.869565 0.8559140 0.0075856 9 0.808435 0.794447 0.01398774 6.5547e-01 8.3552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7757e-01 8.8328e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0312306 6.5690e-01 insignificant 1.0000e+00 insignificant 0.891736 0.2742906 0.61212472 10 0.792090 0.292654 0.49943612 1.8750e-27 1.0000e+00 hypermethylated 8.1523e-26 1.0000e+00 hypermethylated 1.8591e-09 1.0000e+00 hypermethylated 6.4107e-08 1.0000e+00 hypermethylated 0.3062774 6.0344e-02 insignificant 4.1551e-01 insignificant 0.891269 0.8577586 0.02083234 10 0.796942 0.853271 -5.6329e-02 7.1629e-01 7.5174e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4782e-01 0.80861758 insignificant 1.0000e+00 1.00000 insignificant -0.07312624 3.8896e-01 insignificant 1.0000e+00 insignificant 0.2742906 0.8571429 -0.6083522 10 0.292654 0.833707 -5.4105e-01 1.0000e+00 4.9668e-17 hypomethylated 1.0000e+00 3.5477e-15 hypomethylated 1.0000e+00 4.6708e-08 hypomethylated 1.0000e+00 3.3363e-06 hypomethylated -0.3794037 2.7771e-02 weaklyHypometh 0.27771298 insignificant chr1 14712372 14713372 563 ENSG00000209090 0.761347 151 7 0.641290 131 7 0.809524 60 7 0.6929742 104 7 0.797222 83 7 0.7571429 55 6 0.6762740 89 7 0.789362 100 7 0.680952 48 4 0.750347 49 7 0.7800355 164 7 0.666667 28 3 0.781692 87 7 0.718995 104 7 0.771825 55 7 0.528571 32 4 0.750000 8 0 0.7830032 184 5 0.663690 73 7 0.6531507 66 7 0.944444 20 0 0.800000 24 3 0.722278 89 4 0.505456 46 4 0.8331451 88 6 0.6547740 71 4 0.755102 47 6 0.6714286 38 7 0.761219 92 7 0.535757 90 7 0.851218 95 5 0.628348 61 7 0.6711722 112 7 0.7111842 84 7 0.6602564 68 6 0.8333333 5 0 0.5506099 103 4 0.6389161 97 7 0.7742929 117 7 0.642628 102 7 0.7005802 125 6 0.6928571 113 3 0.814762 90 6 0.764311 0.591877 0.824346 0.7923879 0.8108660 0.760294 0.6869830 0.7385989 0.6820261 0.8617919 0.7828763 0.6535948 0.7499010 0.727968 0.7822712 0.54411765 0.734792 0.7982811 0.7635387 0.657469 0.934677 0.7917221 0.725924 0.5788982 0.826604 0.7453589 0.752801 0.6823529 0.725454 0.691623 0.830628 0.722864 0.6827426 0.8023736 0.7317748 0.7648732 0.6468851 0.7429179 0.7983735 0.720085 0.711031 0.7759104 0.807353 0 0.744464 0.730618 0.00769998 7 0.726526 0.708997 0.01752973 0.5062125 0.74059538 insignificant 1 1.00000 insignificant 0.9675084 0.6438914 insignificant 1 1.00000 insignificant 0.00077244 0.9850757 insignificant 1 insignificant 0.744757 0.6816239 0.0593215 7 0.751696 0.562490 0.18920561 1.0317e-02 7.4158e-01 weaklyHypermeth 5.4302e-02 1.0000e+00 weaklyHypermeth 1.2985e-01 5.5512e-01 insignificant 6.7281e-01 1.0000e+00 insignificant 0.0451246 3.1022e-01 insignificant 1.0000e+00 insignificant 0.744604 0.7824497 -0.0133979 4 0.720658 0.666452 0.05420630 7.0526e-01 4.9875e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6619e-01 4.9496e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0023208 9.4856e-01 insignificant 1.0000e+00 insignificant 0.731225 0.6816239 0.05218591 7 0.732218 0.562490 0.16972813 1.3146e-01 9.0143e-01 insignificant 5.8425e-01 1.0000e+00 insignificant 2.2157e-01 8.9692e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0443522 4.1997e-01 insignificant 1.0000e+00 insignificant 0.730871 0.7824497 -0.03189508 4 0.698746 0.666452 3.2294e-02 7.5925e-01 4.1784e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.4523e-01 0.81078886 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.00309323 9.4998e-01 insignificant 1.0000e+00 insignificant 0.6830835 0.7824497 -0.0633257 4 0.632802 0.666452 -3.3650e-02 6.7585e-01 4.1795e-02 lowCoverage 1.0000e+00 2.6453e-01 lowCoverage 7.3891e-01 3.3288e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0474454 3.5739e-01 insignificant 1.00000000 insignificant chr1 15390842 15391842 578 C1orf195 ENSG00000204464 0.811805 509 12 0.754874 283 12 0.750503 118 9 0.8037475 421 11 0.801488 71 8 0.8216248 699 12 0.8112368 83 3 0.834606 281 12 0.788156 169 9 0.817319 151 9 0.8359447 356 12 0.732468 55 5 0.858282 391 12 0.811799 120 6 0.901645 241 11 0.605128 53 5 0.724265 43 2 0.7938090 509 12 0.689872 238 8 0.8115024 552 12 0.721699 167 12 0.840891 180 12 0.802959 246 9 0.717297 188 9 0.7081530 122 9 0.7004983 314 11 0.835450 174 12 0.8310185 91 8 0.805629 283 10 0.755988 400 11 0.751030 374 12 0.840708 579 12 0.7806125 308 11 0.6835014 190 11 0.6938339 96 6 0.6317460 41 4 0.6189396 172 12 0.6844502 404 11 0.8143435 281 12 0.818257 402 12 0.8511293 323 12 0.8738017 283 12 0.803359 369 12 0.832339 0.811164 0.799295 0.8588478 0.8339947 0.813139 0.8443210 0.8438424 0.8134942 0.8693632 0.8634618 0.7450576 0.8641357 0.837116 0.8846832 0.66670598 0.654397 0.8178098 0.8007286 0.813688 0.814536 0.8200561 0.798223 0.8311278 0.772619 0.8433487 0.895176 0.8723251 0.813876 0.873871 0.812355 0.833982 0.7196886 0.7409593 0.8110278 0.7123810 0.7190099 0.7118234 0.8667652 0.862075 0.851975 0.8882795 0.865368 3 0.859629 0.855951 0.00017114 12 0.800500 0.782051 0.01844845 0.5449313 0.63221193 insignificant 1 1.00000 insignificant 0.5845671 0.7204079 insignificant 1 1.00000 insignificant 0.01206037 0.5825627 insignificant 1 insignificant 0.859764 0.7884298 0.0644367 11 0.821964 0.711586 0.11037807 6.9649e-09 9.3818e-01 weaklyHypermeth 6.5706e-08 1.0000e+00 weaklyHypermeth 2.6962e-05 9.8204e-01 weaklyHypermeth 3.5949e-04 1.0000e+00 weaklyHypermeth 0.1058231 3.7327e-03 weaklyHypermeth 4.9115e-02 weaklyHypermeth 0.859764 0.8757539 -0.0222784 12 0.821964 0.849202 -0.02723775 9.5079e-01 2.3356e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4781e-01 3.7263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0441744 3.8981e-02 weaklyHypometh 4.8726e-01 insignificant 0.856041 0.7877787 0.06998417 11 0.737607 0.664147 0.07345998 1.0710e-06 9.8757e-01 weaklyHypermeth 9.7367e-06 1.0000e+00 weaklyHypermeth 3.8474e-04 9.9816e-01 weaklyHypermeth 4.1370e-03 1.0000e+00 weaklyHypermeth 0.0937627 8.1002e-03 weaklyHypermeth 9.0002e-02 weaklyHypermeth 0.856316 0.8757539 -0.02003428 12 0.790293 0.849202 -5.8909e-02 8.4606e-01 9.1660e-02 insignificant 1.0000e+00 1.000000 insignificant 7.1915e-01 0.15012684 insignificant 1.0000e+00 1.00000 insignificant -0.05623479 1.7198e-02 weaklyHypometh 3.2449e-01 insignificant 0.7884298 0.8757539 -0.0855909 11 0.711586 0.849202 -1.3762e-01 9.6084e-01 3.7615e-07 weaklyHypometh 1.0000e+00 7.6765e-06 weaklyHypometh 9.2099e-01 2.1777e-03 weaklyHypometh 1.0000e+00 3.2504e-02 weaklyHypometh -0.1499975 5.8735e-04 weaklyHypometh 0.01957850 weaklyHypometh chr1 15959324 15960324 585 FBLIM1 ENSG00000162458 0.684883 230 7 0.378440 294 8 0.512954 212 8 0.5226314 228 8 0.588173 140 8 0.6151646 408 8 0.6298821 294 8 0.462960 209 8 0.521033 218 8 0.481709 122 8 0.6120355 310 8 0.480021 100 8 0.350810 167 8 0.398012 77 6 0.458929 144 8 0.643506 51 5 0.270586 66 3 0.4012966 281 8 0.282942 323 7 0.5109893 336 8 0.643070 96 7 0.293067 65 3 0.585154 224 8 0.511197 128 8 0.6148019 76 5 0.4837512 376 8 0.518830 210 8 0.4884574 94 8 0.562537 253 8 0.514082 448 8 0.542716 483 8 0.696181 317 8 0.1310250 319 8 0.1128513 274 8 0.4352144 366 6 0.0858586 46 3 0.3819409 247 8 0.1060290 454 8 0.4730586 371 8 0.396993 358 8 0.3851978 198 7 0.2153406 281 8 0.418131 285 8 0.678468 0.420610 0.567936 0.5833143 0.6313883 0.655991 0.6908255 0.5046819 0.5679649 0.5455809 0.6450596 0.4656185 0.3842162 0.454207 0.4826750 0.57497852 0.312036 0.4174563 0.3362012 0.561020 0.701037 0.2979436 0.648913 0.5819294 0.586373 0.5512239 0.568021 0.6377604 0.598306 0.585457 0.562631 0.723895 0.1007727 0.0609523 0.3872688 0.1446269 0.3710580 0.0394063 0.4652493 0.415575 0.328732 0.1928041 0.387394 6 0.515202 0.560650 -0.05809291 8 0.494896 0.547184 -0.05228777 0.9881864 0.00269221 weaklyHypometh 1 0.26922 insignificant 0.9496717 0.0257462 weaklyHypometh 1 1.00000 insignificant -0.04747238 0.2379966 insignificant 1 insignificant 0.515202 0.2045721 0.2956122 8 0.494896 0.219261 0.27563478 1.9315e-21 2.7746e-01 hypermethylated 4.4918e-20 1.0000e+00 hypermethylated 5.9852e-13 5.9601e-01 hypermethylated 2.8501e-11 1.0000e+00 hypermethylated 0.2815280 4.9982e-03 weaklyHypermeth 6.1706e-02 weaklyHypermeth 0.515202 0.3569993 0.1545570 8 0.494896 0.378484 0.11641230 6.7426e-05 9.9566e-01 weaklyHypermeth 1.0703e-03 1.0000e+00 weaklyHypermeth 1.2557e-04 9.3715e-01 weaklyHypermeth 3.1393e-03 1.0000e+00 weaklyHypermeth 0.1126037 6.0289e-02 insignificant 6.4137e-01 insignificant 0.560650 0.2045721 0.34699942 8 0.547184 0.219261 0.32792255 5.4501e-22 3.6785e-01 hypermethylated 2.0185e-20 1.0000e+00 hypermethylated 1.0271e-10 7.5252e-01 hypermethylated 4.6685e-09 1.0000e+00 hypermethylated 0.3290004 2.1050e-03 weaklyHypermeth 2.9648e-02 weaklyHypermeth 0.560650 0.3569993 0.21720768 8 0.547184 0.378484 1.6870e-01 5.2557e-09 9.9884e-01 hypermethylated 2.1899e-07 1.000000 hypermethylated 2.9229e-06 0.99969143 hypermethylated 1.3286e-04 1.00000 hypermethylated 0.16007608 1.5766e-02 weaklyHypermeth 3.0914e-01 insignificant 0.2045721 0.3569993 -0.1337394 8 0.219261 0.378484 -1.5922e-01 7.3840e-01 5.9490e-06 weaklyHypometh 1.0000e+00 1.0083e-04 weaklyHypometh 6.8300e-01 3.8942e-04 weaklyHypometh 1.0000e+00 8.1128e-03 weaklyHypometh -0.1689244 5.8204e-02 insignificant 0.49325264 insignificant chr1 16345028 16346028 599 FAM131C ENSG00000185519 0.101449 73 7 0.151779 176 7 0.093778 227 7 0.1309524 88 5 0.073243 134 7 0.1183264 237 7 0.1391256 276 7 0.124044 239 7 0.079835 297 7 0.113531 220 7 0.1800249 248 7 0.076311 171 7 0.077676 206 7 0.027447 63 2 0.076145 191 7 0.050892 232 5 0.187372 170 3 0.1296296 105 6 0.055833 158 7 0.0603865 197 7 0.098086 116 7 0.023810 87 5 0.137623 118 7 0.123408 82 7 0.0560224 51 4 0.0449481 268 7 0.108564 197 7 0.0868607 134 7 0.104709 117 7 0.065893 253 7 0.151666 209 7 0.160160 279 7 0.0108696 181 7 0.0000000 81 7 0.0000000 105 4 0.1279762 47 5 0.0853175 83 7 0.0080645 193 7 0.1676421 71 5 0.034048 98 5 0.0000000 45 3 0.0571047 74 5 0.065344 84 5 0.087186 0.116980 0.092621 0.0956573 0.0450259 0.095201 0.0759059 0.1117146 0.0674581 0.0767367 0.0911755 0.0757960 0.0379250 0.074792 0.0509238 0.05351694 0.312820 0.0670884 0.0487435 0.050752 0.084684 0.0041254 0.088633 0.0540051 0.025432 0.0383875 0.060732 0.0463421 0.047590 0.044593 0.083736 0.099865 0.0253982 0.0000000 0.0000000 0.0698963 0.0356357 0.0188438 0.0912895 0.041576 0.000000 0.0619937 0.044057 3 0.086863 0.085819 0.00332804 7 0.107779 0.100426 0.00735266 0.3229528 0.86352327 insignificant 1 1.00000 insignificant 0.1133510 0.9766041 insignificant 1 1.00000 insignificant 0.00557653 0.7255437 insignificant 1 insignificant 0.086863 0.0246377 0.0693145 7 0.107779 0.028047 0.07973207 1.3533e-05 9.9999e-01 weaklyHypermeth 1.0100e-04 1.0000e+00 weaklyHypermeth 8.6513e-07 9.9999e-01 weaklyHypermeth 1.6021e-05 1.0000e+00 weaklyHypermeth 0.0636844 3.4136e-02 weaklyHypermeth 2.5860e-01 insignificant 0.086910 0.0564516 0.0179685 5 0.107779 0.071124 0.03665438 3.3304e-01 8.4963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8016e-02 9.9749e-01 insignificant 8.5452e-01 1.0000e+00 insignificant 0.0375614 2.6179e-01 lowCoverage 1.0000e+00 lowCoverage 0.085819 0.0246377 0.06899491 7 0.100426 0.028047 0.07237941 3.7281e-05 9.9761e-01 weaklyHypermeth 2.8900e-04 1.0000e+00 weaklyHypermeth 8.4128e-04 9.9949e-01 weaklyHypermeth 8.0122e-03 1.0000e+00 weaklyHypermeth 0.0581079 5.1113e-02 insignificant 3.7038e-01 insignificant 0.085954 0.0566038 0.00704571 5 0.112979 0.080015 3.2964e-02 3.5875e-01 7.0011e-01 insignificant 1.0000e+00 1.000000 insignificant 1.8044e-01 0.87614122 insignificant 1.0000e+00 1.00000 insignificant 0.03198486 3.4023e-01 lowCoverage 1.0000e+00 lowCoverage 0.0247813 0.0566038 -0.0363637 5 0.031553 0.080015 -4.8462e-02 9.8585e-01 2.9554e-03 weaklyHypometh 1.0000e+00 2.5259e-02 weaklyHypometh 9.7579e-01 3.9658e-02 weaklyHypometh 1.0000e+00 3.1227e-01 insignificant -0.0261230 4.8665e-01 lowCoverage 1.00000000 lowCoverage chr1 16822905 16823905 608 ENSG00000179571 0.793438 334 11 0.683419 412 11 0.695435 298 11 0.7423920 273 11 0.839709 322 8 0.7797647 541 11 0.8325714 449 11 0.788944 266 11 0.706504 255 8 0.737950 206 10 0.8010075 635 11 0.840573 224 5 0.777181 208 9 0.786508 46 5 0.810156 259 7 0.706672 445 5 0.903544 340 5 0.6832819 313 12 0.872556 283 11 0.8076022 401 11 0.739227 174 7 0.764376 149 4 0.690768 238 11 0.686899 207 8 0.8507792 357 6 0.8339629 493 11 0.612610 174 8 0.7943873 176 5 0.797167 226 11 0.763474 487 11 0.846186 582 11 0.824356 519 11 0.7119395 322 11 0.6822150 425 11 0.6220720 236 11 0.7900230 181 6 0.6546661 273 11 0.8301589 451 11 0.7946453 218 9 0.857935 370 11 0.7981155 247 9 0.7712853 250 9 0.774926 353 10 0.829214 0.750939 0.716010 0.8458118 0.8433997 0.833857 0.8054179 0.7484526 0.7382294 0.8363073 0.7679923 0.8534393 0.7886521 0.827205 0.8020098 0.78815616 0.835775 0.8518477 0.8669870 0.818115 0.713885 0.7524106 0.733432 0.7433743 0.771610 0.8121883 0.678095 0.7879648 0.789208 0.852432 0.854993 0.861723 0.7564269 0.7100726 0.6384081 0.7557752 0.7043589 0.8506027 0.8332430 0.880286 0.852718 0.8877589 0.834358 3 0.816869 0.816764 -0.00494990 11 0.721576 0.776899 -0.05532310 0.3889351 0.00352057 weaklyHypometh 1 0.32005 insignificant 0.5235215 0.1061084 insignificant 1 1.00000 insignificant 0.01244430 0.6310151 insignificant 1 insignificant 0.816869 0.7351695 0.0816546 11 0.721576 0.753562 -0.03198590 4.4805e-06 9.8410e-01 weaklyHypermeth 3.4733e-05 1.0000e+00 weaklyHypermeth 2.7340e-02 9.8179e-01 weaklyHypermeth 1.6773e-01 1.0000e+00 insignificant 0.0642813 1.1503e-01 insignificant 6.9717e-01 insignificant 0.818728 0.8518776 -0.0507005 10 0.776499 0.791309 -0.01480927 7.3768e-01 6.8950e-03 weaklyHypometh 1.0000e+00 4.9250e-01 insignificant 9.1162e-01 1.7974e-02 weaklyHypometh 1.0000e+00 9.4061e-01 insignificant -0.0199208 3.6263e-01 insignificant 1.0000e+00 insignificant 0.816764 0.7351695 0.09136059 11 0.776899 0.753562 0.02333720 3.9455e-07 9.5519e-01 weaklyHypermeth 3.9455e-06 1.0000e+00 weaklyHypermeth 7.0908e-03 9.0645e-01 weaklyHypermeth 5.4128e-02 1.0000e+00 weaklyHypermeth 0.0518370 2.1611e-01 insignificant 1.0000e+00 insignificant 0.816715 0.8518776 -0.04043506 10 0.758308 0.791309 -3.3001e-02 6.8631e-01 1.9879e-01 insignificant 1.0000e+00 1.000000 insignificant 7.5717e-01 0.15640152 insignificant 1.0000e+00 1.00000 insignificant -0.03236511 2.3860e-01 insignificant 1.0000e+00 insignificant 0.7350291 0.8518776 -0.1246686 10 0.733026 0.791309 -5.8283e-02 9.8034e-01 4.8210e-04 weaklyHypometh 1.0000e+00 5.4169e-03 weaklyHypometh 9.8517e-01 8.9524e-04 weaklyHypometh 1.0000e+00 1.5435e-02 weaklyHypometh -0.0842022 5.3083e-02 insignificant 0.45369933 insignificant chr1 16831793 16832793 610 CROCCL1 ENSG00000215908 0.802754 75 4 0.692416 140 7 0.696429 58 6 0.7563104 55 4 0.730839 69 7 0.8127509 123 7 0.6605339 68 4 0.800449 154 7 0.804722 65 4 0.877778 105 6 0.8118820 242 7 0.887302 40 5 0.929518 164 7 0.797386 77 2 0.906593 95 7 0.626984 38 4 0.916667 17 2 0.8857641 99 3 0.886974 131 7 0.8535714 68 6 0.818376 82 4 0.666667 3 0 0.677228 61 5 0.784354 41 6 0.6969697 34 4 0.8593673 170 7 0.734070 73 7 0.7414966 31 3 0.837402 95 7 0.923541 170 7 0.874885 156 7 0.714758 93 6 0.7107981 92 6 0.6943576 152 6 0.8743056 46 3 0.7333333 10 0 0.7220779 95 7 0.7485327 92 6 0.6996047 58 3 0.746252 56 3 0.7406015 53 3 0.8409091 26 2 0.757236 45 3 0.718815 0.603981 0.635165 0.6781729 0.6436170 0.698270 0.6221102 0.8252208 0.6914894 0.8386678 0.7313904 0.8829787 0.8908496 0.812679 0.8297872 0.56737589 0.745670 0.7672548 0.8735536 0.726950 0.706265 0.6413608 0.595436 0.6568389 0.563265 0.7933591 0.503833 0.5460993 0.780906 0.866758 0.817012 0.693516 0.6068327 0.6203310 0.7503546 0.4751773 0.6359338 0.6569273 0.5833824 0.628250 0.637018 0.6798839 0.571806 0 0.804567 0.845391 -0.01934728 7 0.810215 0.834165 -0.02394956 0.7981353 0.07164620 insignificant 1 1.00000 insignificant 0.2488259 0.4728618 insignificant 1 1.00000 insignificant 0.02945495 0.3593688 insignificant 1 insignificant 0.804567 0.7351129 0.0697824 6 0.810215 0.747151 0.06306395 1.4427e-03 9.5879e-01 weaklyHypermeth 8.3877e-03 1.0000e+00 weaklyHypermeth 8.0560e-02 9.6993e-01 insignificant 4.4264e-01 1.0000e+00 insignificant 0.0596470 9.8940e-02 lowCoverage 6.1837e-01 lowCoverage 0.804567 0.6092437 0.1264576 3 0.810215 0.771104 0.03911125 3.3564e-02 1.1229e-01 lowCoverage 3.0793e-01 1.0000e+00 lowCoverage 1.3554e-01 1.3660e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0499605 1.3057e-01 lowCoverage 1.0000e+00 lowCoverage 0.845391 0.7351129 0.10028192 6 0.834165 0.747151 0.08701352 2.5668e-03 9.9956e-01 weaklyHypermeth 1.5188e-02 1.0000e+00 weaklyHypermeth 4.8061e-01 9.0168e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0301920 4.1765e-01 lowCoverage 1.0000e+00 lowCoverage 0.845391 0.6092437 0.12027735 3 0.834165 0.771104 6.3061e-02 4.0146e-02 1.7756e-01 lowCoverage 3.4313e-01 1.000000 lowCoverage 5.6684e-01 0.04010631 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.02050552 5.5341e-01 lowCoverage 1.0000e+00 lowCoverage 0.7351129 0.6092437 0.0146355 3 0.747151 0.771104 -2.3953e-02 7.0527e-01 3.6135e-02 lowCoverage 1.0000e+00 2.3164e-01 lowCoverage 9.1263e-01 1.4278e-01 lowCoverage 1.0000e+00 9.0367e-01 lowCoverage -0.0096865 7.8941e-01 lowCoverage 1.00000000 lowCoverage chr1 16895886 16896886 613 ENSG00000157819 0.894678 1000 8 0.717009 957 7 0.759896 605 7 0.8948704 1209 8 0.726228 424 6 0.8175097 1369 7 0.6901186 641 8 0.815482 750 7 0.921183 521 6 0.725259 883 7 0.8733023 1007 7 0.786027 244 8 0.691633 454 6 0.800227 507 6 0.773602 649 6 0.931472 233 7 0.625000 13 2 0.7580848 1538 8 0.848182 1285 7 0.8748744 559 7 0.774028 315 6 0.829597 233 7 0.894617 546 7 0.863892 351 7 0.9195578 153 6 0.8123597 995 7 0.628999 649 6 0.8348063 423 8 0.794920 1031 6 0.796037 555 6 0.803663 1056 8 0.882178 876 9 0.5237208 650 7 0.7038222 330 6 0.4863330 499 6 0.6556268 131 5 0.4396636 310 8 0.6203043 1103 7 0.7732746 1066 8 0.816423 841 6 0.9039507 1025 7 0.7642213 796 5 0.892089 772 7 0.868497 0.749789 0.833411 0.8732951 0.8123951 0.887148 0.7797684 0.8841952 0.8746355 0.8597884 0.8689410 0.8914720 0.8137809 0.857682 0.8586170 0.98109132 0.946756 0.8384920 0.9003629 0.834722 0.908285 0.8638854 0.873099 0.9014541 0.871059 0.8829925 0.746858 0.8675597 0.866945 0.876217 0.881846 0.891080 0.6462560 0.7624235 0.6433200 0.7729858 0.5584411 0.9130818 0.9315035 0.901941 0.902975 0.8545825 0.874713 5 0.854256 0.867186 -0.01510852 7 0.775629 0.798203 -0.02257413 0.8971837 0.11352123 insignificant 1 1.00000 insignificant 0.7158394 0.1903291 insignificant 1 1.00000 insignificant -0.02332277 0.4272771 insignificant 1 insignificant 0.854928 0.7085676 0.1431862 7 0.845937 0.589361 0.25657596 4.2544e-18 8.8966e-01 weaklyHypermeth 7.8785e-17 1.0000e+00 weaklyHypermeth 4.9097e-09 9.9648e-01 weaklyHypermeth 1.2920e-07 1.0000e+00 weaklyHypermeth 0.2246534 1.7701e-03 weaklyHypermeth 2.6419e-02 weaklyHypermeth 0.854256 0.8877778 -0.0330231 6 0.775629 0.788235 -0.01260600 7.1074e-01 8.4301e-03 weaklyHypometh 1.0000e+00 5.1506e-01 insignificant 7.2378e-01 1.1696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0337600 3.6269e-01 insignificant 1.0000e+00 insignificant 0.867512 0.7085676 0.15894408 7 0.842448 0.589361 0.25308689 1.0283e-11 9.7483e-01 weaklyHypermeth 1.7139e-10 1.0000e+00 weaklyHypermeth 6.3227e-08 9.9702e-01 weaklyHypermeth 1.5054e-06 1.0000e+00 weaklyHypermeth 0.2479761 9.1384e-04 hypermethylated 1.4672e-02 hypermethylated 0.867186 0.8877778 -0.01947742 6 0.798203 0.788235 9.9681e-03 6.7887e-01 1.4361e-01 insignificant 1.0000e+00 1.000000 insignificant 7.7324e-01 0.21062702 insignificant 1.0000e+00 1.00000 insignificant -0.01043719 7.8068e-01 insignificant 1.0000e+00 insignificant 0.7085676 0.8883700 -0.1628304 6 0.589361 0.875817 -2.8646e-01 1.0000e+00 3.9680e-07 weaklyHypometh 1.0000e+00 7.9360e-06 weaklyHypometh 1.0000e+00 1.1704e-05 weaklyHypometh 1.0000e+00 4.0357e-04 weaklyHypometh -0.2584133 8.5896e-04 hypomethylated 0.02438268 hypomethylated chr1 17940260 17941260 626 ARHGEF10L ENSG00000074964 0.933239 67 3 0.792097 245 7 0.668086 133 5 0.9634921 53 2 0.673649 58 3 0.9245959 112 5 0.9533930 108 6 0.877226 68 4 0.877612 60 3 0.938725 39 3 0.8931813 173 5 0.895833 27 3 0.803922 38 4 0.715385 20 2 0.918056 41 4 0.916667 22 3 0.923077 16 1 0.8314286 25 2 0.951282 49 2 0.9438889 93 4 0.880310 44 3 1.000000 5 0 0.844281 101 4 0.855952 52 3 0.9054545 33 3 0.9187349 147 6 0.794156 65 4 0.8285714 41 4 0.772634 76 2 0.836909 195 6 0.916207 162 5 0.947746 136 4 0.5804152 242 7 0.4740260 56 3 0.6944444 200 4 0.9875000 20 1 0.6969862 64 4 0.1968615 174 6 0.9330484 68 3 0.937619 82 4 0.9151139 39 2 0.9375000 30 2 0.916667 62 3 0.880589 0.783787 0.644215 0.9111111 0.8492380 0.898595 0.9435725 0.8416001 0.8795479 0.8052073 0.8656250 0.6393443 0.8899068 0.848754 0.8579235 0.91256831 0.856641 0.8538642 0.9058428 0.864699 0.862424 0.9328930 0.874893 0.8688525 0.907224 0.9082704 0.885991 1.0000000 0.864458 0.940173 0.943794 0.879320 0.7001952 0.6072493 0.8113843 1.0000000 0.6278081 0.0546803 0.8240157 0.817518 0.828938 0.9344262 1.000000 1 0.853979 0.901422 -0.04474841 4 0.803904 0.758165 0.04573828 0.8759461 0.04712444 lowCoverage 1 1.00000 lowCoverage 0.6436381 0.2327946 lowCoverage 1 1.00000 lowCoverage -0.00533805 0.8505767 lowCoverage 1 lowCoverage 0.854470 0.5410053 0.3157107 4 0.847318 0.517291 0.33002712 3.4199e-16 1.0000e+00 lowCoverage 5.6064e-15 1.0000e+00 lowCoverage 2.5080e-05 1.0000e+00 lowCoverage 3.3892e-04 1.0000e+00 lowCoverage 0.2647028 5.6891e-02 lowCoverage 3.7927e-01 lowCoverage 0.854470 0.8683274 -0.0183515 2 0.847318 0.921980 -0.07466167 9.8926e-01 1.0186e-03 lowCoverage 1.0000e+00 1.4551e-01 lowCoverage 9.9270e-01 7.4666e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0582479 1.2518e-02 lowCoverage 2.2354e-01 lowCoverage 0.903134 0.5410053 0.33387118 6 0.866475 0.517291 0.34918337 4.5369e-11 1.0000e+00 hypermethylated 6.7715e-10 1.0000e+00 hypermethylated 6.0171e-05 1.0000e+00 hypermethylated 8.8486e-04 1.0000e+00 hypermethylated 0.2700409 5.3490e-02 lowCoverage 3.7936e-01 lowCoverage 0.903134 0.8683274 0.03487251 2 0.866475 0.921980 -5.5505e-02 5.1537e-01 2.3899e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.4537e-01 0.07256288 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.05290984 1.8846e-02 lowCoverage 3.4156e-01 lowCoverage 0.5410053 0.8683274 -0.3082462 2 0.517291 0.921980 -4.0469e-01 9.9999e-01 1.0558e-08 lowCoverage 1.0000e+00 2.8534e-07 lowCoverage 1.0000e+00 6.7842e-04 lowCoverage 1.0000e+00 1.2563e-02 lowCoverage -0.3229507 2.9966e-02 lowCoverage 0.29669081 lowCoverage chr1 18004805 18005805 631 ACTL8 ENSG00000117148 0.900942 252 5 0.880872 147 4 0.642134 57 4 0.9460392 219 5 0.821212 40 4 0.9115364 154 5 0.8558333 61 5 0.867619 71 5 0.887630 92 4 0.725000 34 4 0.8815018 136 5 0.778571 21 3 0.876658 71 4 0.850000 29 3 0.875092 64 4 0.500000 3 0 0.800000 5 1 0.8899650 200 5 0.894634 87 4 0.8989890 140 4 0.839560 46 4 0.803509 44 4 0.923964 131 5 0.962500 64 5 0.9033309 125 5 0.9210845 140 5 0.743333 50 4 0.8939286 59 4 0.960185 98 4 0.880110 109 5 0.844167 117 5 0.911059 209 5 0.4163612 186 5 0.6264706 89 3 0.6764706 136 4 0.5152381 43 3 0.6967902 82 5 0.4164090 205 5 0.7826959 218 5 0.839908 179 4 0.8546300 238 4 0.7989011 62 4 0.638734 220 5 0.901543 0.863050 0.686864 0.9303420 0.8256130 0.936579 0.9278226 0.9191628 0.8868285 0.9435484 0.8986663 0.7201669 0.8091860 0.816595 0.9127673 0.90092604 NA 0.8682358 0.8860276 0.864021 0.888072 0.7996346 0.913753 0.9909274 0.937650 0.9180052 0.827957 0.8913882 0.936828 0.882821 0.804167 0.897174 0.4573398 0.5827799 0.5769243 0.5059908 0.7521201 0.3005201 0.7418410 0.771820 0.859947 0.8234669 0.746980 3 0.879448 0.899329 -0.02231234 5 0.874709 0.896813 -0.02210331 0.9171740 0.15299440 insignificant 1 1.00000 insignificant 0.9332231 0.0825445 insignificant 1 1.00000 insignificant -0.04801606 0.1208546 lowCoverage 1 lowCoverage 0.879448 0.5222672 0.3609689 5 0.874709 0.517275 0.35743437 2.2688e-18 1.0000e+00 hypermethylated 4.5376e-17 1.0000e+00 hypermethylated 4.0592e-06 9.9997e-01 hypermethylated 6.3425e-05 1.0000e+00 hypermethylated 0.2762549 1.6635e-03 lowCoverage 2.5205e-02 lowCoverage 0.879448 0.7860262 0.0859488 4 0.874709 0.805202 0.06950710 7.4045e-05 9.3378e-01 lowCoverage 1.1570e-03 1.0000e+00 lowCoverage 1.1793e-02 9.1331e-01 lowCoverage 1.6610e-01 1.0000e+00 lowCoverage 0.0512376 2.9084e-01 lowCoverage 1.0000e+00 lowCoverage 0.899329 0.5222672 0.37125816 5 0.896813 0.517275 0.37953768 8.8635e-14 1.0000e+00 hypermethylated 1.6724e-12 1.0000e+00 hypermethylated 1.0781e-05 1.0000e+00 hypermethylated 1.8588e-04 1.0000e+00 hypermethylated 0.3242709 8.5527e-04 lowCoverage 1.4425e-02 lowCoverage 0.899329 0.7860262 0.10692110 4 0.896813 0.805202 9.1610e-02 8.1344e-05 9.9811e-01 lowCoverage 1.4526e-03 1.000000 lowCoverage 6.1905e-03 0.99785395 lowCoverage 8.9718e-02 1.00000 lowCoverage 0.09925364 5.8953e-02 lowCoverage 6.4080e-01 lowCoverage 0.5222672 0.7860262 -0.2670855 4 0.517275 0.805202 -2.8793e-01 9.9989e-01 4.9034e-05 lowCoverage 1.0000e+00 6.9062e-04 lowCoverage 9.9919e-01 2.4387e-03 lowCoverage 1.0000e+00 3.4694e-02 lowCoverage -0.2250173 7.0689e-03 lowCoverage 0.10395457 lowCoverage chr1 18853921 18854921 684 PAX7 ENSG00000009709 0.829545 44 3 0.542302 85 5 0.676768 102 4 0.6984127 61 6 0.440239 72 5 0.8267070 179 6 0.4652708 70 5 0.616207 105 4 0.661176 94 4 0.789228 64 4 0.7260682 149 5 0.713970 57 4 0.519457 90 4 0.528972 84 4 0.517778 93 5 0.555556 36 1 0.000000 1 0 0.5075881 62 2 0.808208 88 5 0.6988885 125 5 0.908333 28 1 0.390000 59 4 0.579293 67 5 0.775428 156 5 0.6508772 33 1 0.4574273 154 5 0.792787 136 5 0.7250000 44 4 0.537093 96 5 0.156832 215 5 0.560819 133 5 0.699509 129 6 0.4556704 70 5 0.6156250 59 5 0.6061453 127 5 0.0000000 1 0 0.2552429 129 5 0.6455256 127 5 0.3001984 86 6 0.558549 67 3 0.5091575 66 5 0.5888889 14 1 0.425191 91 6 0.744949 0.531633 0.612458 0.6317460 0.3798037 0.752068 0.3562697 0.5738576 0.5138126 0.5802391 0.6144007 0.5761673 0.4414502 0.475676 0.4512169 0.36329390 NA 0.5373141 0.7387079 0.438748 0.608889 0.2496296 0.576543 0.7127076 0.530279 0.4212572 0.639446 0.5731481 0.505848 0.072074 0.407446 0.640513 0.4129769 0.5748148 0.5033637 NA 0.1918436 0.6877946 0.2595062 0.468327 0.400407 0.5197531 0.283203 1 0.593976 0.503200 0.10270975 5 0.641884 0.547898 0.09398593 0.0071585 0.99698837 weaklyHypermeth 1 1.00000 insignificant 0.5137920 0.8990174 insignificant 1 1.00000 insignificant 0.00333384 0.9637136 lowCoverage 1 lowCoverage 0.593976 0.5087719 0.0880757 5 0.641884 0.591688 0.05019599 1.2410e-02 9.0069e-01 weaklyHypermeth 6.4301e-02 1.0000e+00 weaklyHypermeth 1.4820e-02 9.5730e-01 weaklyHypermeth 9.6231e-02 1.0000e+00 weaklyHypermeth 0.1764155 1.6349e-01 lowCoverage 9.2889e-01 lowCoverage 0.593976 0.3950617 0.2040691 3 0.641884 0.454954 0.18692967 7.3412e-06 9.9999e-01 lowCoverage 1.4395e-04 1.0000e+00 lowCoverage 1.6196e-03 9.9980e-01 lowCoverage 2.8414e-02 1.0000e+00 lowCoverage 0.1297200 8.1350e-02 lowCoverage 7.3955e-01 lowCoverage 0.503200 0.5087719 -0.00475102 5 0.547898 0.591688 -0.04378994 5.6112e-01 3.2605e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5946e-02 9.0872e-01 insignificant 4.1959e-01 1.0000e+00 insignificant 0.1730817 1.8591e-01 lowCoverage 9.5435e-01 lowCoverage 0.503200 0.3950617 0.09280750 3 0.547898 0.454954 9.2944e-02 1.4205e-01 9.9125e-01 lowCoverage 9.9333e-01 1.000000 lowCoverage 1.6055e-02 0.99892141 lowCoverage 2.1379e-01 1.00000 lowCoverage 0.12638616 1.3171e-01 lowCoverage 1.0000e+00 lowCoverage 0.5087719 0.3950617 0.1064087 3 0.591688 0.454954 1.3673e-01 8.2119e-02 9.4690e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2599e-01 5.9360e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0466955 7.0086e-01 lowCoverage 1.00000000 lowCoverage chr1 18854279 18855279 685 PAX7 ENSG00000009709 0.829545 44 3 0.542302 85 5 0.676768 102 4 0.6984127 61 6 0.440239 72 5 0.8267070 179 6 0.4652708 70 5 0.616207 105 4 0.661176 94 4 0.789228 64 4 0.7260682 149 5 0.713970 57 4 0.519457 90 4 0.528972 84 4 0.517778 93 5 0.555556 36 1 0.000000 1 0 0.5075881 62 2 0.808208 88 5 0.6988885 125 5 0.908333 28 1 0.390000 59 4 0.579293 67 5 0.775428 156 5 0.6508772 33 1 0.4574273 154 5 0.792787 136 5 0.7250000 44 4 0.537093 96 5 0.156832 215 5 0.560819 133 5 0.699509 129 6 0.4556704 70 5 0.6156250 59 5 0.6061453 127 5 0.0000000 1 0 0.2552429 129 5 0.6455256 127 5 0.3001984 86 6 0.558549 67 3 0.5091575 66 5 0.5888889 14 1 0.425191 91 6 0.744949 0.531633 0.612458 0.6317460 0.3798037 0.752068 0.3562697 0.5738576 0.5138126 0.5802391 0.6144007 0.5761673 0.4414502 0.475676 0.4512169 0.36329390 NA 0.5373141 0.7387079 0.438748 0.608889 0.2496296 0.576543 0.7127076 0.530279 0.4212572 0.639446 0.5731481 0.505848 0.072074 0.407446 0.640513 0.4129769 0.5748148 0.5033637 NA 0.1918436 0.6877946 0.2595062 0.468327 0.400407 0.5197531 0.283203 1 0.593976 0.503200 0.10270975 5 0.641884 0.547898 0.09398593 0.0071585 0.99698837 weaklyHypermeth 1 1.00000 insignificant 0.5137920 0.8990174 insignificant 1 1.00000 insignificant 0.00333384 0.9637136 lowCoverage 1 lowCoverage 0.593976 0.5087719 0.0880757 5 0.641884 0.591688 0.05019599 1.2410e-02 9.0069e-01 weaklyHypermeth 6.4301e-02 1.0000e+00 weaklyHypermeth 1.4820e-02 9.5730e-01 weaklyHypermeth 9.6231e-02 1.0000e+00 weaklyHypermeth 0.1764155 1.6349e-01 lowCoverage 9.2889e-01 lowCoverage 0.593976 0.3950617 0.2040691 3 0.641884 0.454954 0.18692967 7.3412e-06 9.9999e-01 lowCoverage 1.4395e-04 1.0000e+00 lowCoverage 1.6196e-03 9.9980e-01 lowCoverage 2.8414e-02 1.0000e+00 lowCoverage 0.1297200 8.1350e-02 lowCoverage 7.3955e-01 lowCoverage 0.503200 0.5087719 -0.00475102 5 0.547898 0.591688 -0.04378994 5.6112e-01 3.2605e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5946e-02 9.0872e-01 insignificant 4.1959e-01 1.0000e+00 insignificant 0.1730817 1.8591e-01 lowCoverage 9.5435e-01 lowCoverage 0.503200 0.3950617 0.09280750 3 0.547898 0.454954 9.2944e-02 1.4205e-01 9.9125e-01 lowCoverage 9.9333e-01 1.000000 lowCoverage 1.6055e-02 0.99892141 lowCoverage 2.1379e-01 1.00000 lowCoverage 0.12638616 1.3171e-01 lowCoverage 1.0000e+00 lowCoverage 0.5087719 0.3950617 0.1064087 3 0.591688 0.454954 1.3673e-01 8.2119e-02 9.4690e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2599e-01 5.9360e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0466955 7.0086e-01 lowCoverage 1.00000000 lowCoverage chr1 18874749 18875749 690 PAX7 ENSG00000009709 0.774824 139 5 0.717157 192 5 0.713528 63 4 0.7525874 169 5 0.624306 43 4 0.8165425 287 5 0.7917749 69 5 0.612348 113 5 0.744561 85 5 0.870732 55 2 0.7796561 181 5 0.745977 53 4 0.761587 110 4 0.629000 44 3 0.781732 91 4 0.645238 52 1 0.800000 11 0 0.7634921 165 5 0.993333 57 3 0.7457652 176 5 0.691009 53 5 0.635859 60 4 0.848001 79 4 0.705625 64 5 0.7417328 70 5 0.8357238 209 5 0.718333 76 5 0.6724639 80 5 0.787189 84 4 0.801775 144 5 0.902579 151 5 0.835619 197 5 0.5251634 151 5 0.1364070 85 4 0.4973545 54 3 0.2600000 18 3 0.4199362 149 5 0.3333333 160 5 0.7122735 169 5 0.875436 206 5 0.7113067 233 4 0.8910160 83 5 0.829924 207 5 0.807703 0.697567 0.755906 0.7426016 0.7571319 0.830256 0.8419648 0.6524691 0.8300721 0.8812659 0.9450433 0.8003314 0.7580972 0.672464 0.7097162 0.81178791 0.907975 0.7495618 0.9801227 0.706703 0.918039 0.6546257 0.865778 0.7535326 0.709624 0.8420830 0.837986 0.7639731 0.848226 0.772764 0.896796 0.857727 0.4498777 0.1721985 0.2712046 0.5233129 0.4256230 0.3635992 0.5707897 0.837068 0.757477 0.8708737 0.822853 2 0.789327 0.812995 -0.02496812 5 0.717337 0.826668 -0.10933178 0.9509104 0.07472200 insignificant 1 1.00000 insignificant 0.9622126 0.1967025 insignificant 1 1.00000 insignificant -0.01145205 0.7140460 lowCoverage 1 lowCoverage 0.789327 0.3186992 0.4705497 5 0.717337 0.357274 0.36006221 2.6830e-28 9.9974e-01 hypermethylated 8.9433e-27 1.0000e+00 hypermethylated 3.9566e-10 9.9909e-01 hypermethylated 1.3189e-08 1.0000e+00 hypermethylated 0.3911747 8.1070e-04 lowCoverage 1.4223e-02 lowCoverage 0.789327 0.7547380 0.0352729 5 0.717337 0.803123 -0.08578657 3.8366e-01 4.8110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1473e-01 4.1760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0507843 2.8745e-01 lowCoverage 1.0000e+00 lowCoverage 0.812995 0.3186992 0.49715149 5 0.826668 0.357274 0.46939398 1.6473e-19 1.0000e+00 hypermethylated 5.1477e-18 1.0000e+00 hypermethylated 4.2182e-10 1.0000e+00 hypermethylated 1.6873e-08 1.0000e+00 hypermethylated 0.4026267 5.7842e-04 lowCoverage 1.0394e-02 lowCoverage 0.812995 0.7547380 0.06437802 5 0.826668 0.803123 2.3545e-02 2.1485e-01 9.6713e-01 insignificant 1.0000e+00 1.000000 insignificant 5.4345e-01 0.83286406 insignificant 1.0000e+00 1.00000 insignificant -0.03933220 4.1666e-01 lowCoverage 1.0000e+00 lowCoverage 0.3209076 0.7550111 -0.4385092 5 0.449092 0.831248 -3.8216e-01 1.0000e+00 8.0573e-11 hypomethylated 1.0000e+00 2.6858e-09 hypomethylated 1.0000e+00 4.0130e-06 hypomethylated 1.0000e+00 1.6052e-04 hypomethylated -0.4419589 2.5023e-04 lowCoverage 0.00980049 lowCoverage chr1 19682818 19683818 706 CAPZB ENSG00000077549 0.228421 223 5 0.049072 189 5 0.144905 142 5 0.0232194 144 5 0.023167 180 5 0.2033393 323 5 0.0603914 161 5 0.011765 149 5 0.040476 111 5 0.178482 151 5 0.1003175 216 5 0.036074 105 5 0.000000 108 5 0.353558 92 5 0.037407 167 5 0.014286 113 5 NA 0 0 0.3186397 180 5 0.188495 234 5 0.0327426 305 5 0.050000 51 2 0.000000 4 0 0.087390 127 5 0.070751 90 5 0.0000000 13 0 0.0111502 287 5 0.169958 281 5 0.2184524 118 5 0.021932 227 5 0.049955 303 5 0.045608 330 5 0.061218 271 5 0.0125000 98 5 0.0194570 213 5 0.0000000 273 5 NA 0 0 0.0416667 175 5 0.0199272 382 5 0.0378775 295 5 0.133247 277 5 0.0412698 119 5 0.0686090 218 5 0.213007 138 5 0.050424 0.039322 0.084562 0.0289380 0.0291859 0.151062 0.0435654 0.0071895 0.0298060 0.0634416 0.0921693 0.0388660 0.0000000 0.048834 0.0279733 0.00873016 NA 0.0391123 0.0256824 0.018088 0.030556 0.0207597 0.081748 0.0409640 0.000000 0.0094777 0.026212 0.0520172 0.022539 0.073498 0.028256 0.051658 0.0204861 0.0233409 0.0000000 NA 0.0000000 0.0140360 0.0382573 0.043948 0.036984 0.0537792 0.037340 2 0.063772 0.044719 0.01979847 5 0.334801 0.197125 0.13767649 0.3096189 0.99992737 insignificant 1 1.00000 insignificant 0.5962922 0.9956242 insignificant 1 1.00000 insignificant 0.04208419 0.1914961 lowCoverage 1 lowCoverage 0.063830 0.0131464 0.0507098 5 0.362701 0.046880 0.31582134 2.9330e-02 9.9996e-01 weaklyHypermeth 1.4813e-01 1.0000e+00 insignificant 2.9183e-02 1.0000e+00 weaklyHypermeth 1.7687e-01 1.0000e+00 insignificant 0.0889086 2.4896e-03 lowCoverage 3.6081e-02 lowCoverage 0.062786 0.0611270 0.0068323 5 0.273219 0.185507 0.08771114 3.0964e-01 8.8009e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9780e-01 7.0000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0088166 8.3663e-01 lowCoverage 1.0000e+00 lowCoverage 0.044265 0.0131464 0.03121939 5 0.130218 0.046880 0.08333848 5.1856e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7688e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0468244 3.8950e-02 lowCoverage 2.9285e-01 lowCoverage 0.043893 0.0611270 -0.01499500 5 0.070328 0.185507 -1.1518e-01 8.9970e-01 2.5311e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6489e-01 0.09387823 insignificant 1.0000e+00 1.00000 insignificant -0.03326754 4.1646e-01 lowCoverage 1.0000e+00 lowCoverage 0.0132275 0.0611270 -0.0482937 5 0.070320 0.185507 -1.1519e-01 9.9415e-01 1.3649e-03 weaklyHypometh 1.0000e+00 1.3382e-02 weaklyHypometh 9.9222e-01 1.0387e-02 weaklyHypometh 1.0000e+00 1.1050e-01 insignificant -0.0800919 7.2906e-02 lowCoverage 0.57406146 lowCoverage chr1 19713266 19714266 708 ENSG00000201609 0.870015 269 6 0.817066 274 6 0.838180 206 6 0.9586730 192 6 0.848840 107 5 0.9063366 424 6 0.7817356 174 6 0.852023 229 6 0.836668 216 6 0.908402 159 6 0.8409915 273 6 0.918664 106 5 0.933899 269 6 0.889864 51 3 0.899086 180 5 1.000000 52 4 0.802325 95 5 0.8892437 234 6 0.917496 212 5 0.9191094 342 6 0.799830 69 6 0.872603 87 5 0.830614 246 6 0.757696 105 5 0.5950927 68 5 0.7851728 281 6 0.854573 86 6 0.9377289 59 5 0.848392 269 6 0.883096 413 6 0.888342 361 6 0.867184 408 6 0.5790948 276 6 0.6731585 125 6 0.8888889 59 2 0.6435426 70 5 0.5839823 139 6 0.7531935 329 6 0.6519225 329 6 0.881123 323 6 0.9339235 220 6 0.9041676 249 6 0.874929 219 6 0.879264 0.861751 0.882512 0.9732276 0.8814733 0.934722 0.8221561 0.8819596 0.8466528 0.9281915 0.8840957 0.9181296 0.9517133 0.938593 0.9247535 0.99704944 0.790446 0.9084802 0.9192969 0.935820 0.808140 0.8962756 0.900912 0.8616500 0.832102 0.9109281 0.901880 0.8868965 0.866462 0.942586 0.926439 0.904755 0.5775340 0.7395806 0.8244097 0.7380984 0.6847685 0.8389303 0.9058112 0.924030 0.942552 0.9216533 0.911963 5 0.893701 0.883361 0.00313395 6 0.909384 0.741126 0.16825819 0.0703048 0.81642808 insignificant 1 1.00000 insignificant 0.1465238 0.9413391 insignificant 1 1.00000 insignificant 0.05473719 0.0697161 insignificant 1 insignificant 0.893648 0.7655311 0.1273614 6 0.896439 0.589611 0.30682826 3.5141e-11 9.9771e-01 weaklyHypermeth 4.3927e-10 1.0000e+00 weaklyHypermeth 4.2366e-04 9.9996e-01 weaklyHypermeth 4.1536e-03 1.0000e+00 weaklyHypermeth 0.1944541 8.7962e-03 weaklyHypermeth 9.5611e-02 weaklyHypermeth 0.893701 0.9141791 -0.0106698 6 0.909384 0.665551 0.24383384 9.2757e-01 1.9512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9650e-01 4.7712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0322176 5.6463e-01 insignificant 1.0000e+00 insignificant 0.883673 0.7655311 0.12943894 6 0.775573 0.589611 0.18596176 2.4006e-06 9.8507e-01 weaklyHypermeth 2.0695e-05 1.0000e+00 weaklyHypermeth 1.1034e-02 9.9810e-01 weaklyHypermeth 7.9956e-02 1.0000e+00 weaklyHypermeth 0.1397169 3.3609e-02 weaklyHypermeth 2.5853e-01 insignificant 0.883361 0.9141791 -0.01275326 6 0.741126 0.665551 7.5576e-02 8.7051e-01 1.3236e-01 insignificant 1.0000e+00 1.000000 insignificant 9.2222e-01 0.27975650 insignificant 1.0000e+00 1.00000 insignificant -0.02251961 7.0337e-01 insignificant 1.0000e+00 insignificant 0.7655311 0.9148618 -0.1422363 6 0.589611 0.760629 -1.7102e-01 9.9469e-01 2.9395e-04 weaklyHypometh 1.0000e+00 3.5416e-03 weaklyHypometh 9.9965e-01 9.1280e-03 weaklyHypometh 1.0000e+00 1.0142e-01 insignificant -0.1622365 4.5562e-02 weaklyHypometh 0.40320273 insignificant chr1 19762834 19763834 709 ENSG00000209589 0.872399 271 7 0.653240 216 7 0.671210 235 7 0.8329261 158 4 0.758262 127 6 0.8573915 356 7 0.7856835 229 6 0.877931 225 7 0.838962 212 6 0.830845 224 7 0.8560267 260 7 0.785004 54 4 0.850014 237 7 0.771827 102 3 0.855698 184 6 0.712821 61 6 0.791751 102 7 0.4800614 201 6 0.854468 164 7 0.8726183 359 7 0.953333 117 7 0.633333 102 5 0.828235 285 7 0.696135 152 7 0.8928571 22 1 0.8828366 238 7 0.852678 125 7 0.8754313 105 6 0.862749 176 7 0.846463 324 7 0.843652 298 7 0.868275 373 7 0.0141821 423 7 0.0231036 215 7 0.0000000 103 3 0.0084034 102 7 0.0222527 217 7 0.0081953 377 7 0.7303719 254 7 0.720648 192 7 0.7061228 212 7 0.7393624 128 7 0.491016 158 6 0.863522 0.649514 0.703786 0.8661403 0.7348950 0.860530 0.8363558 0.8871909 0.7846087 0.8056058 0.8474465 0.7818346 0.8695040 0.798639 0.8693109 0.75527562 0.798182 0.4967632 0.8661569 0.865934 0.921998 0.5810685 0.826013 0.7942070 0.886760 0.8740095 0.871030 0.8104352 0.854526 0.846835 0.838735 0.883735 0.0166094 0.0387408 0.0010121 0.0176266 0.0353525 0.0069665 0.7635197 0.741839 0.700663 0.7452770 0.612098 3 0.808901 0.841174 -0.03102078 7 0.806258 0.843145 -0.03688688 0.9977488 0.04489576 weaklyHypometh 1 1.00000 insignificant 0.9911995 0.0564166 insignificant 1 1.00000 insignificant -0.04587457 0.1821686 insignificant 1 insignificant 0.808901 0.0160056 0.7922373 7 0.806258 0.013002 0.79325617 7.7421e-83 1.0000e+00 hypermethylated 1.9355e-80 1.0000e+00 hypermethylated 4.7087e-18 1.0000e+00 hypermethylated 6.7267e-16 1.0000e+00 hypermethylated 0.7777674 2.2236e-19 hypermethylated 7.4120e-17 hypermethylated 0.808901 0.7129237 0.0907395 7 0.806258 0.710624 0.09563378 6.4199e-05 9.8184e-01 weaklyHypermeth 1.0355e-03 1.0000e+00 weaklyHypermeth 1.4353e-04 9.7239e-01 weaklyHypermeth 3.4175e-03 1.0000e+00 weaklyHypermeth 0.1129526 7.3053e-02 insignificant 6.9574e-01 insignificant 0.841174 0.0160056 0.82512785 7 0.843145 0.013002 0.83014305 5.0463e-73 1.0000e+00 hypermethylated 1.2616e-70 1.0000e+00 hypermethylated 5.5529e-16 1.0000e+00 hypermethylated 9.2548e-14 1.0000e+00 hypermethylated 0.8236420 1.2604e-12 hypermethylated 4.2015e-10 hypermethylated 0.841174 0.7129237 0.12213614 7 0.843145 0.710624 1.3252e-01 2.3691e-06 9.9894e-01 weaklyHypermeth 5.2647e-05 1.000000 weaklyHypermeth 3.4279e-06 0.99903132 weaklyHypermeth 1.3713e-04 1.00000 weaklyHypermeth 0.15882717 2.2597e-02 weaklyHypermeth 3.8015e-01 insignificant 0.0160056 0.7129237 -0.7013790 7 0.013002 0.710624 -6.9762e-01 1.0000e+00 2.8454e-44 hypomethylated 1.0000e+00 9.4846e-42 hypomethylated 1.0000e+00 7.3894e-10 hypomethylated 1.0000e+00 1.8473e-07 hypomethylated -0.6648148 1.3530e-04 hypomethylated 0.00698728 hypomethylated chr1 19762963 19763963 710 ENSG00000209589 0.872399 271 7 0.653240 216 7 0.671210 235 7 0.8329261 158 4 0.758262 127 6 0.8573915 356 7 0.7856835 229 6 0.877931 225 7 0.838962 212 6 0.830845 224 7 0.8560267 260 7 0.785004 54 4 0.850014 237 7 0.771827 102 3 0.855698 184 6 0.712821 61 6 0.791751 102 7 0.4800614 201 6 0.854468 164 7 0.8726183 359 7 0.953333 117 7 0.633333 102 5 0.828235 285 7 0.696135 152 7 0.8928571 22 1 0.8828366 238 7 0.852678 125 7 0.8754313 105 6 0.862749 176 7 0.846463 324 7 0.843652 298 7 0.868275 373 7 0.0141821 423 7 0.0231036 215 7 0.0000000 103 3 0.0084034 102 7 0.0222527 217 7 0.0081953 377 7 0.7303719 254 7 0.720648 192 7 0.7061228 212 7 0.7393624 128 7 0.491016 158 6 0.863522 0.649514 0.703786 0.8661403 0.7348950 0.860530 0.8363558 0.8871909 0.7846087 0.8056058 0.8474465 0.7818346 0.8695040 0.798639 0.8693109 0.75527562 0.798182 0.4967632 0.8661569 0.865934 0.921998 0.5810685 0.826013 0.7942070 0.886760 0.8740095 0.871030 0.8104352 0.854526 0.846835 0.838735 0.883735 0.0166094 0.0387408 0.0010121 0.0176266 0.0353525 0.0069665 0.7635197 0.741839 0.700663 0.7452770 0.612098 3 0.808901 0.841174 -0.03102078 7 0.806258 0.843145 -0.03688688 0.9977488 0.04489576 weaklyHypometh 1 1.00000 insignificant 0.9911995 0.0564166 insignificant 1 1.00000 insignificant -0.04587457 0.1821686 insignificant 1 insignificant 0.808901 0.0160056 0.7922373 7 0.806258 0.013002 0.79325617 7.7421e-83 1.0000e+00 hypermethylated 1.9355e-80 1.0000e+00 hypermethylated 4.7087e-18 1.0000e+00 hypermethylated 6.7267e-16 1.0000e+00 hypermethylated 0.7777674 2.2236e-19 hypermethylated 7.4120e-17 hypermethylated 0.808901 0.7129237 0.0907395 7 0.806258 0.710624 0.09563378 6.4199e-05 9.8184e-01 weaklyHypermeth 1.0355e-03 1.0000e+00 weaklyHypermeth 1.4353e-04 9.7239e-01 weaklyHypermeth 3.4175e-03 1.0000e+00 weaklyHypermeth 0.1129526 7.3053e-02 insignificant 6.9574e-01 insignificant 0.841174 0.0160056 0.82512785 7 0.843145 0.013002 0.83014305 5.0463e-73 1.0000e+00 hypermethylated 1.2616e-70 1.0000e+00 hypermethylated 5.5529e-16 1.0000e+00 hypermethylated 9.2548e-14 1.0000e+00 hypermethylated 0.8236420 1.2604e-12 hypermethylated 4.2015e-10 hypermethylated 0.841174 0.7129237 0.12213614 7 0.843145 0.710624 1.3252e-01 2.3691e-06 9.9894e-01 weaklyHypermeth 5.2647e-05 1.000000 weaklyHypermeth 3.4279e-06 0.99903132 weaklyHypermeth 1.3713e-04 1.00000 weaklyHypermeth 0.15882717 2.2597e-02 weaklyHypermeth 3.8015e-01 insignificant 0.0160056 0.7129237 -0.7013790 7 0.013002 0.710624 -6.9762e-01 1.0000e+00 2.8454e-44 hypomethylated 1.0000e+00 9.4846e-42 hypomethylated 1.0000e+00 7.3894e-10 hypomethylated 1.0000e+00 1.8473e-07 hypomethylated -0.6648148 1.3530e-04 hypomethylated 0.00698728 hypomethylated chr1 21597246 21598246 753 ENSG00000182068 0.791005 150 5 0.824864 255 5 0.802557 150 5 0.8153138 167 5 0.888283 59 5 0.8186591 237 5 0.7141062 74 5 0.839899 223 5 0.751688 108 5 0.856667 156 5 0.9023115 226 5 0.799798 55 5 0.797310 162 5 0.878571 148 5 0.730406 237 5 0.733333 42 3 0.700000 13 0 0.8825243 130 5 0.847436 162 5 0.7820068 142 5 0.747456 85 6 0.706685 94 5 0.889615 129 5 0.748918 86 5 0.9158974 66 5 0.8827350 260 5 0.769850 151 5 0.7916667 42 5 0.778193 100 5 0.870769 292 5 0.860122 256 5 0.903382 172 5 0.5162298 174 5 0.6964103 51 5 0.3461538 152 2 0.6333333 11 0 0.4127006 152 5 0.7938895 184 5 0.7425321 64 3 0.911741 68 3 0.7523756 123 5 0.8366516 64 3 0.831134 82 5 0.786371 0.805541 0.827037 0.8958211 0.9095589 0.849991 0.6801939 0.8718969 0.8095972 0.8886064 0.9222268 0.9054043 0.7820138 0.910815 0.8797793 0.74387947 0.679996 0.8871017 0.9004056 0.870266 0.840998 0.7209719 0.911993 0.9084306 0.966333 0.8948672 0.739421 0.8475047 0.826848 0.899609 0.896238 0.892913 0.4569997 0.7889034 0.3552169 0.5677966 0.5344324 0.8625876 0.7342496 0.856904 0.771551 0.7529974 0.804777 3 0.848705 0.859781 -0.01151284 5 0.857400 0.851225 0.00617430 0.8548026 0.51945752 insignificant 1 1.00000 insignificant 0.7999228 0.5141910 insignificant 1 1.00000 insignificant -0.01427042 0.5705343 lowCoverage 1 lowCoverage 0.848412 0.5400552 0.2639412 5 0.734914 0.602448 0.13246654 9.4204e-15 1.0000e+00 hypermethylated 1.3653e-13 1.0000e+00 hypermethylated 1.6479e-04 9.9979e-01 hypermethylated 1.8726e-03 1.0000e+00 hypermethylated 0.2413841 1.7666e-02 lowCoverage 1.5362e-01 lowCoverage 0.848600 0.7830424 0.0823489 3 0.828880 0.792154 0.03672535 5.2925e-04 6.2963e-01 lowCoverage 7.4543e-03 1.0000e+00 lowCoverage 1.5028e-02 2.8809e-01 lowCoverage 2.0047e-01 1.0000e+00 lowCoverage -0.0070499 8.4210e-01 lowCoverage 1.0000e+00 lowCoverage 0.859781 0.5394191 0.28189653 5 0.851225 0.536189 0.31503666 1.3459e-11 9.9999e-01 hypermethylated 2.2063e-10 1.0000e+00 hypermethylated 9.8188e-05 9.9986e-01 hypermethylated 1.3450e-03 1.0000e+00 hypermethylated 0.2556545 1.3315e-02 lowCoverage 1.2969e-01 lowCoverage 0.859547 0.7830424 0.09213066 3 0.841471 0.792154 4.9316e-02 9.9511e-04 9.1726e-01 lowCoverage 1.3094e-02 1.000000 lowCoverage 1.6248e-02 0.43860828 lowCoverage 2.1379e-01 1.00000 lowCoverage 0.00722052 8.5173e-01 lowCoverage 1.0000e+00 lowCoverage 0.5395284 0.7830424 -0.1285622 3 0.543427 0.792154 -2.4873e-01 9.9701e-01 3.1347e-05 lowCoverage 1.0000e+00 4.6099e-04 lowCoverage 9.9867e-01 1.0104e-02 lowCoverage 1.0000e+00 1.0983e-01 lowCoverage -0.2484340 1.4831e-02 lowCoverage 0.17655493 lowCoverage chr1 21789334 21790334 758 ALPL ENSG00000162551 0.654934 287 6 0.542129 239 6 0.583177 187 6 0.4966167 397 6 0.524659 90 6 0.6240850 433 6 0.6538280 195 6 0.572461 165 6 0.606663 241 6 0.566639 214 6 0.6427442 231 6 0.623214 122 6 0.441516 251 6 0.624278 91 4 0.492299 174 6 0.551982 138 6 0.565344 55 6 0.3228724 467 6 0.489499 124 6 0.5063696 280 6 0.832864 90 6 0.181795 221 6 0.571955 194 6 0.624426 127 6 0.5878109 108 6 0.5423297 260 6 0.641835 113 6 0.7053744 116 6 0.572419 155 6 0.600204 301 6 0.454407 253 6 0.718393 430 6 0.0091787 264 6 0.0337104 136 6 0.0990087 149 4 0.1071429 47 5 0.0653959 147 6 0.0206636 302 6 0.1715416 346 6 0.144217 315 6 0.1378598 358 6 0.2369797 367 6 0.142646 362 6 0.674378 0.538513 0.577691 0.5135339 0.5498802 0.620745 0.6977957 0.5768618 0.5962981 0.5839608 0.6553141 0.6323772 0.4303044 0.582244 0.4893724 0.55241677 0.551810 0.3123186 0.4909477 0.521854 0.840126 0.1491348 0.591257 0.6106098 0.554168 0.5458295 0.690328 0.7373914 0.567724 0.577147 0.439636 0.723036 0.0066398 0.0339080 0.1088371 0.0924370 0.0654503 0.0162956 0.1605094 0.135161 0.125780 0.2032810 0.136340 6 0.545081 0.575591 -0.03070731 6 0.541411 0.576086 -0.03467443 0.9556451 0.17643738 insignificant 1 1.00000 insignificant 0.9845127 0.1467144 insignificant 1 1.00000 insignificant -0.03188554 0.5303683 insignificant 1 insignificant 0.545081 0.0401914 0.5031734 6 0.541411 0.040491 0.50092031 2.2932e-40 1.0000e+00 hypermethylated 1.1466e-38 1.0000e+00 hypermethylated 6.2774e-16 1.0000e+00 hypermethylated 6.2774e-14 1.0000e+00 hypermethylated 0.4984155 1.7616e-13 hypermethylated 1.6014e-11 hypermethylated 0.545081 0.1447368 0.3866598 6 0.541411 0.168260 0.37315084 6.0583e-26 1.0000e+00 hypermethylated 8.6548e-24 1.0000e+00 hypermethylated 1.6395e-16 1.0000e+00 hypermethylated 5.4648e-14 1.0000e+00 hypermethylated 0.3876167 1.5256e-09 hypermethylated 7.6279e-07 hypermethylated 0.575591 0.0401914 0.53388454 6 0.576086 0.040491 0.53559474 9.1285e-28 1.0000e+00 hypermethylated 4.3469e-26 1.0000e+00 hypermethylated 1.7050e-13 1.0000e+00 hypermethylated 1.7050e-11 1.0000e+00 hypermethylated 0.5303011 4.7222e-08 hypermethylated 2.7778e-06 hypermethylated 0.575591 0.1447368 0.41868392 6 0.576086 0.168260 4.0783e-01 2.0175e-17 1.0000e+00 hypermethylated 2.2416e-15 1.000000 hypermethylated 3.1886e-11 1.00000000 hypermethylated 4.0163e-09 1.00000 hypermethylated 0.41950228 7.8585e-07 hypermethylated 3.8525e-04 hypermethylated 0.0401914 0.1447368 -0.1148447 6 0.040491 0.168260 -1.2777e-01 9.9956e-01 1.5415e-08 weaklyHypometh 1.0000e+00 3.9524e-07 weaklyHypometh 1.0000e+00 1.7322e-05 weaklyHypometh 1.0000e+00 5.4132e-04 weaklyHypometh -0.1107988 1.8424e-03 weaklyHypometh 0.04187355 weaklyHypometh chr1 21822331 21823331 762 RAP1GAP ENSG00000076864 0.977135 214 7 0.897556 166 7 0.920475 192 7 0.9723400 222 5 0.945341 134 7 0.9248028 299 7 0.9311177 126 7 0.922104 175 7 0.948108 183 7 0.949177 191 7 0.9361201 305 7 0.940714 116 7 0.955703 211 7 0.936425 117 5 0.931351 222 7 0.887117 87 7 0.844241 57 4 0.9528097 305 5 0.988366 137 6 0.9149886 165 7 0.967818 70 7 0.988057 80 3 0.956261 126 7 0.949399 117 7 0.9888889 43 2 0.9170606 221 7 0.936883 162 4 0.9469538 112 7 0.977336 117 4 0.932463 238 7 0.946449 190 7 0.965481 277 7 0.6067389 176 7 0.6943582 96 4 0.5615942 123 5 0.8181818 21 2 0.7707916 172 7 0.6946429 199 7 0.9606311 152 7 0.899145 149 7 0.8287743 153 5 0.8059988 183 7 0.820870 183 7 0.957835 0.864689 0.838500 0.9539263 0.8931717 0.911178 0.9259249 0.8854045 0.9598306 0.9119649 0.9139102 0.9031756 0.9218630 0.905907 0.9069964 0.83626670 0.840581 0.8990790 0.9654631 0.894367 0.922128 0.9744432 0.874280 0.9697044 0.983561 0.9414921 0.869641 0.8896001 0.932110 0.917042 0.949224 0.949347 0.3800420 0.5941182 0.5363625 0.5703798 0.6607430 0.5826748 0.9161218 0.837356 0.933370 0.8585319 0.771913 2 0.918874 0.931507 -0.01210764 7 0.934255 0.940762 -0.00650636 0.8685741 0.15835987 insignificant 1 1.00000 insignificant 0.9936905 0.0311397 weaklyHypometh 1 1.00000 insignificant -0.02228792 0.0289271 weaklyHypometh 1 insignificant 0.918874 0.6399491 0.2905248 7 0.934255 0.690787 0.24346804 9.6744e-25 1.0000e+00 hypermethylated 2.6873e-23 1.0000e+00 hypermethylated 1.0704e-08 1.0000e+00 hypermethylated 2.4892e-07 1.0000e+00 hypermethylated 0.2427483 1.3839e-03 weaklyHypermeth 2.1477e-02 weaklyHypermeth 0.918874 0.8743902 0.0419628 7 0.934255 0.879898 0.05435781 1.1570e-03 9.9943e-01 weaklyHypermeth 1.5025e-02 1.0000e+00 weaklyHypermeth 1.6870e-02 9.9587e-01 weaklyHypermeth 2.1628e-01 1.0000e+00 insignificant 0.0707159 7.1084e-02 insignificant 6.9014e-01 insignificant 0.931546 0.6391360 0.30362223 7 0.948167 0.604439 0.34372760 1.7751e-15 1.0000e+00 hypermethylated 3.7768e-14 1.0000e+00 hypermethylated 2.5959e-07 1.0000e+00 hypermethylated 5.5232e-06 1.0000e+00 hypermethylated 0.2650362 9.4484e-04 hypermethylated 1.4763e-02 hypermethylated 0.931507 0.8743902 0.05816722 7 0.940762 0.879898 6.0864e-02 4.2542e-04 9.9998e-01 weaklyHypermeth 6.2561e-03 1.000000 weaklyHypermeth 1.6969e-03 0.99994459 weaklyHypermeth 3.2900e-02 1.00000 weaklyHypermeth 0.09300378 3.1523e-02 weaklyHypermeth 4.6357e-01 insignificant 0.6399491 0.8743902 -0.2593956 7 0.690787 0.879898 -1.8911e-01 9.9970e-01 2.6418e-05 hypomethylated 1.0000e+00 4.1279e-04 hypomethylated 9.9921e-01 4.1775e-03 weaklyHypometh 1.0000e+00 5.4966e-02 weaklyHypometh -0.1720325 6.9280e-03 weaklyHypometh 0.10340306 insignificant chr1 22090903 22091903 769 HSPG2 ENSG00000142798 0.824060 321 11 0.776149 241 14 0.830219 142 13 0.9008362 274 11 0.948417 152 11 0.8155987 571 13 0.7972577 215 12 0.863654 221 12 0.750232 170 13 0.839794 229 13 0.8961120 469 14 0.885999 111 11 0.927251 216 13 0.947408 141 10 0.855977 221 13 0.660450 78 5 0.367347 24 1 0.9221835 349 11 0.850713 340 13 0.8745134 431 13 0.839957 147 12 0.929158 117 9 0.833943 202 13 0.854762 135 11 0.8987957 226 11 0.8868214 317 14 0.816596 302 13 0.8085356 127 7 0.830978 291 11 0.837503 300 14 0.898215 341 14 0.889323 500 13 0.8167735 320 14 0.8448165 250 14 0.8296608 272 11 0.8333333 54 4 0.6809651 196 12 0.8481917 331 14 0.8108832 277 11 0.954198 325 13 0.8560361 194 5 0.9210923 505 6 0.854010 271 11 0.854570 0.860919 0.858722 0.9118885 0.9260640 0.867707 0.8284980 0.8783364 0.8115955 0.8896603 0.8960617 0.8488302 0.9219529 0.902000 0.8730881 0.75018623 0.540894 0.9225867 0.8814138 0.879930 0.859994 0.9354810 0.869157 0.8657116 0.921834 0.9155672 0.831986 0.7786422 0.842692 0.911564 0.911865 0.901371 0.7644561 0.8683760 0.7544557 0.8266470 0.7569398 0.9085602 0.8618952 0.959049 0.872782 0.9335534 0.919484 6 0.878307 0.875874 0.00200546 12 0.872233 0.806315 0.06591881 0.7525095 0.75470909 insignificant 1 1.00000 insignificant 0.8829827 0.3854983 insignificant 1 1.00000 insignificant -0.03367366 0.2865056 insignificant 1 insignificant 0.878103 0.8362614 0.0440355 13 0.805567 0.786509 0.01905807 3.9191e-03 8.6835e-01 weaklyHypermeth 2.1773e-02 1.0000e+00 weaklyHypermeth 3.2641e-01 6.4404e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0177518 6.5304e-01 insignificant 1.0000e+00 insignificant 0.878307 0.9306616 -0.0315723 10 0.872233 0.876548 -0.00431478 6.5862e-01 6.8625e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7970e-01 1.7619e-03 weaklyHypometh 1.0000e+00 3.5238e-01 insignificant -0.0525353 1.9349e-01 insignificant 1.0000e+00 insignificant 0.876165 0.8368495 0.03674760 13 0.863909 0.842688 0.02122064 2.5616e-02 8.7005e-01 weaklyHypermeth 1.3069e-01 1.0000e+00 insignificant 1.9519e-01 6.2701e-01 insignificant 9.6155e-01 1.0000e+00 insignificant 0.0514255 1.1254e-01 insignificant 6.7797e-01 insignificant 0.875874 0.9306616 -0.03972554 10 0.806315 0.876548 -7.0234e-02 7.9629e-01 1.0399e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6890e-01 0.02685682 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.01886166 5.2764e-01 insignificant 1.0000e+00 insignificant 0.8368495 0.9305732 -0.0913083 10 0.842688 0.867730 -2.5042e-02 6.2678e-01 2.5914e-03 weaklyHypometh 1.0000e+00 2.2732e-02 weaklyHypometh 9.4202e-01 1.9936e-02 weaklyHypometh 1.0000e+00 1.8807e-01 insignificant -0.0702871 8.7096e-02 insignificant 0.63573638 insignificant chr1 22129849 22130849 774 ENSG00000220169 0.774997 418 13 0.692995 183 10 0.885802 177 9 0.7990677 407 13 0.774901 62 5 0.5605220 499 13 0.6186050 102 7 0.735615 195 10 0.650465 171 6 0.761281 246 10 0.8353323 360 13 0.315130 100 7 0.697495 374 12 0.812378 163 4 0.589173 255 11 0.638548 69 6 0.590826 91 7 0.3865867 639 13 0.848554 226 11 0.6526659 338 13 0.764740 104 8 0.436220 235 13 0.760026 213 9 0.621382 146 8 0.5334833 204 13 0.7442249 493 13 0.601772 222 10 0.6389069 94 6 0.824504 246 12 0.818299 461 13 0.746236 341 13 0.748693 468 13 0.0057692 357 13 0.0028571 276 11 0.0000000 205 7 0.0714286 217 11 0.0111578 299 13 0.0088235 423 13 0.6625312 253 12 0.560980 514 13 0.5685005 330 13 0.4733426 373 13 0.580254 410 13 0.831482 0.689644 0.805302 0.8326287 0.8135042 0.730151 0.6899910 0.8187774 0.7658207 0.8177044 0.8376139 0.4653926 0.7810541 0.753877 0.6811460 0.64730952 0.516859 0.4297538 0.8575810 0.790555 0.785640 0.5063145 0.830429 0.6448472 0.703050 0.7256442 0.723924 0.6834056 0.799644 0.772121 0.820198 0.836236 0.0114370 0.0011730 0.0038714 0.0000000 0.0299274 0.0053390 0.7477979 0.572982 0.623593 0.4093081 0.646618 5 0.726502 0.737217 -0.02452565 13 0.658790 0.702023 -0.04323366 0.8041736 0.08631443 insignificant 1 1.00000 insignificant 0.6787090 0.7465298 insignificant 1 1.00000 insignificant -0.00549359 0.9093239 insignificant 1 insignificant 0.726502 0.0095667 0.7066763 13 0.658790 0.021209 0.63758032 2.2605e-91 1.0000e+00 hypermethylated 2.2605e-88 1.0000e+00 hypermethylated 8.7444e-30 1.0000e+00 hypermethylated 8.7444e-27 1.0000e+00 hypermethylated 0.6643742 2.1562e-15 hypermethylated 3.5937e-13 hypermethylated 0.726502 0.5579787 0.1406347 13 0.658790 0.553911 0.10487873 4.8059e-05 9.9996e-01 weaklyHypermeth 8.0098e-04 1.0000e+00 weaklyHypermeth 2.0793e-04 1.0000e+00 weaklyHypermeth 4.7257e-03 1.0000e+00 weaklyHypermeth 0.1119251 2.4148e-02 weaklyHypermeth 3.3079e-01 insignificant 0.737217 0.0095667 0.73060801 13 0.702023 0.021209 0.68081398 2.0768e-87 1.0000e+00 hypermethylated 2.0768e-84 1.0000e+00 hypermethylated 1.8262e-26 1.0000e+00 hypermethylated 1.8262e-23 1.0000e+00 hypermethylated 0.6698678 9.9554e-11 hypermethylated 1.2444e-08 hypermethylated 0.737217 0.5579787 0.17013656 13 0.702023 0.553911 1.4811e-01 1.1874e-07 1.0000e+00 weaklyHypermeth 3.8304e-06 1.000000 weaklyHypermeth 2.1985e-03 0.99999541 weaklyHypermeth 3.9973e-02 1.00000 weaklyHypermeth 0.11741873 2.3536e-02 weaklyHypermeth 3.8015e-01 insignificant 0.0095667 0.5579787 -0.5500273 13 0.021209 0.553911 -5.3270e-01 1.0000e+00 7.3062e-50 hypomethylated 1.0000e+00 7.3062e-47 hypomethylated 1.0000e+00 6.7348e-19 hypomethylated 1.0000e+00 5.6008e-16 hypomethylated -0.5524491 1.0495e-05 hypomethylated 0.00209902 hypomethylated chr1 22313205 22314205 781 CDC42 ENSG00000070831 0.653958 106 6 0.705952 57 6 0.675099 51 4 0.6107338 91 6 0.809753 35 2 0.7795323 155 6 0.6770833 48 2 0.688763 63 4 0.726698 69 5 0.486203 50 4 0.6893727 90 6 0.616667 41 2 0.501703 88 6 0.716667 11 2 0.402778 48 4 0.466667 29 2 0.714744 35 3 0.4113939 106 6 0.808730 37 4 0.4841255 144 6 0.907738 34 4 0.379407 80 6 0.695853 101 6 0.590278 36 4 0.8095238 47 4 0.5681168 98 6 0.648810 67 6 0.6795918 29 2 0.536364 38 2 0.536134 125 6 0.754293 73 6 0.847290 166 6 0.4029558 81 6 0.4759259 30 3 0.4486486 57 4 0.4077381 37 3 0.4455782 47 4 0.5789175 64 6 0.2318903 135 6 0.319214 109 6 0.2669160 70 6 0.3715539 84 6 0.269808 133 6 0.858631 0.682292 0.628720 0.7176582 0.7424341 0.783259 0.8298611 0.6784512 0.7581019 0.6485399 0.8132303 0.7597222 0.5592576 0.681146 0.5763889 0.62500000 0.734776 0.4298972 0.8194444 0.600640 0.870536 0.4423668 0.862903 0.7465278 0.836310 0.6065257 0.788194 0.8184524 0.576894 0.602517 0.846149 0.877925 0.3790509 0.4564815 0.4984578 0.4203869 0.5436508 0.7718428 0.2864719 0.310499 0.341969 0.4463111 0.250726 2 0.655096 0.678971 -0.03575714 6 0.553971 0.549678 0.00429256 0.9062216 0.31191655 insignificant 1 1.00000 insignificant 0.9162225 0.3548641 insignificant 1 1.00000 insignificant -0.03145206 0.5541328 lowCoverage 1 lowCoverage 0.655096 0.4651899 0.1936209 5 0.553971 0.365965 0.18800609 3.1715e-05 9.9955e-01 weaklyHypermeth 2.2982e-04 1.0000e+00 weaklyHypermeth 1.0687e-03 9.9942e-01 weaklyHypermeth 9.2133e-03 1.0000e+00 weaklyHypermeth 0.1713704 3.6489e-04 lowCoverage 7.4467e-03 lowCoverage 0.658718 0.2504708 0.3738829 6 0.648152 0.285023 0.36312893 9.8055e-17 1.0000e+00 hypermethylated 6.5370e-15 1.0000e+00 hypermethylated 2.1089e-09 1.0000e+00 hypermethylated 1.6222e-07 1.0000e+00 hypermethylated 0.3394547 9.6917e-08 lowCoverage 1.9383e-05 lowCoverage 0.678971 0.4651899 0.22965367 5 0.549678 0.365965 0.18371353 2.4800e-04 9.9997e-01 hypermethylated 1.7103e-03 1.0000e+00 hypermethylated 3.0670e-03 1.0000e+00 weaklyHypermeth 2.5347e-02 1.0000e+00 weaklyHypermeth 0.2028224 1.1015e-03 lowCoverage 1.6690e-02 lowCoverage 0.681665 0.2504708 0.40919718 6 0.677349 0.285023 3.9233e-01 1.7182e-13 1.0000e+00 hypermethylated 1.3217e-11 1.000000 hypermethylated 4.0447e-09 1.00000000 hypermethylated 3.3706e-07 1.00000 hypermethylated 0.37090679 2.2166e-06 lowCoverage 4.4331e-04 lowCoverage 0.4696486 0.2504708 0.1871356 5 0.487953 0.285023 2.0293e-01 2.0919e-04 9.9994e-01 weaklyHypermeth 2.0919e-02 1.0000e+00 weaklyHypermeth 4.4090e-04 9.9998e-01 weaklyHypermeth 1.4697e-01 1.0000e+00 insignificant 0.1680844 1.1288e-03 lowCoverage 0.02894268 lowCoverage chr1 22383963 22384963 787 WNT4 ENSG00000162552 0.784746 296 7 0.680410 289 9 0.683486 203 9 0.8556047 280 7 0.838886 152 8 0.8181850 414 8 0.5184105 219 6 0.660804 234 9 0.585470 222 8 0.832626 255 7 0.7737833 298 9 0.795678 86 8 0.715515 304 8 0.778690 203 7 0.733238 251 8 0.777986 122 8 0.567708 304 3 0.6113268 395 7 0.798474 356 8 0.7602031 319 8 0.808595 74 6 0.565896 127 7 0.831839 196 8 0.688555 186 8 0.8880952 35 5 0.8056779 335 9 0.682381 218 8 0.4790605 88 6 0.776412 273 8 0.712879 454 9 0.753441 330 9 0.835697 355 8 0.3571673 213 9 0.3098129 232 8 0.3194444 156 4 0.5714286 11 0 0.5656503 262 9 0.6169921 314 8 0.3214016 248 7 0.470305 266 7 0.6605102 217 7 0.5193151 285 7 0.514046 196 7 0.758600 0.735465 0.684617 0.7797484 0.7487388 0.774944 0.6239220 0.7332478 0.6255357 0.7625992 0.7530342 0.8021925 0.7070294 0.765118 0.7110310 0.77479217 0.650565 0.6857779 0.8503076 0.751710 0.756780 0.6216515 0.747029 0.7648560 0.929817 0.7453511 0.719254 0.6318402 0.776854 0.707118 0.727171 0.843423 0.4944262 0.3219769 0.3942775 0.2627171 0.4677965 0.6504520 0.4357850 0.607607 0.649730 0.5424164 0.465448 4 0.760477 0.759655 -0.00090287 8 0.686215 0.739897 -0.05368126 0.9101967 0.34257092 insignificant 1 1.00000 insignificant 0.9534650 0.4296849 insignificant 1 1.00000 insignificant -0.00714915 0.8620913 insignificant 1 insignificant 0.760439 0.4633530 0.2881190 8 0.673459 0.496308 0.17715097 3.4259e-25 1.0000e+00 hypermethylated 9.7882e-24 1.0000e+00 hypermethylated 9.0714e-10 1.0000e+00 hypermethylated 2.9263e-08 1.0000e+00 hypermethylated 0.2718123 3.8714e-03 weaklyHypermeth 5.0279e-02 weaklyHypermeth 0.760477 0.5714286 0.1942706 7 0.686215 0.436538 0.24967725 6.2330e-20 1.0000e+00 weaklyHypermeth 6.2330e-18 1.0000e+00 weaklyHypermeth 6.8139e-07 1.0000e+00 weaklyHypermeth 2.6207e-05 1.0000e+00 weaklyHypermeth 0.2314460 9.4098e-03 weaklyHypermeth 1.7754e-01 insignificant 0.760690 0.4638047 0.28308965 8 0.784433 0.542098 0.24233498 3.8940e-16 1.0000e+00 hypermethylated 9.7351e-15 1.0000e+00 hypermethylated 2.2094e-07 1.0000e+00 hypermethylated 4.9099e-06 1.0000e+00 hypermethylated 0.2789614 2.7733e-03 weaklyHypermeth 3.7145e-02 weaklyHypermeth 0.760015 0.5709571 0.20092474 7 0.759905 0.402958 3.5695e-01 1.2756e-11 1.0000e+00 hypermethylated 7.5035e-10 1.000000 hypermethylated 4.2288e-07 1.00000000 hypermethylated 2.3494e-05 1.00000 hypermethylated 0.23859515 6.8264e-03 weaklyHypermeth 1.6650e-01 insignificant 0.4638047 0.5710744 -0.0725837 7 0.542098 0.385314 1.5678e-01 9.5732e-01 4.6040e-02 weaklyHypometh 1.0000e+00 2.8775e-01 insignificant 9.1465e-01 2.5541e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0403663 6.2390e-01 insignificant 1.00000000 insignificant chr1 22407509 22408509 789 WNT4 ENSG00000162552 0.425399 262 4 0.417168 149 5 0.468671 114 8 0.3002968 253 7 0.357692 79 8 0.3852941 272 8 0.3602098 100 9 0.610035 192 10 0.308578 82 6 0.606382 82 4 0.6207382 301 13 0.520833 26 1 0.265373 149 8 0.516204 41 3 0.336457 92 5 0.548148 34 5 0.100000 36 1 0.2978458 360 5 0.240463 238 9 0.1933399 287 9 0.624554 95 7 0.172159 120 5 0.539484 125 6 0.573149 85 5 0.3669145 376 10 0.4132568 255 13 0.483637 132 8 0.4917929 42 3 0.423753 200 7 0.309461 277 12 0.250396 287 13 0.828543 242 9 0.3161720 235 13 0.2628888 249 10 0.1775658 265 4 0.1620328 315 8 0.4538756 216 12 0.1792841 397 11 0.1097656 397 8 0.057537 345 11 0.0458674 341 7 0.1379242 398 5 0.058545 374 11 0.566748 0.448413 0.426736 0.3338137 0.2110746 0.439710 0.4990876 0.5174326 0.3654605 0.4151459 0.6671477 0.3312632 0.1262437 0.662750 0.3317930 0.58229118 NA 0.2630725 0.3713408 0.244799 0.744126 0.0377243 0.576685 0.5279669 0.413413 0.4477078 0.490492 0.6448494 0.434431 0.350756 0.285922 0.841711 0.2916969 0.1365395 0.1362404 0.1290706 0.3624430 0.0430902 0.0489478 0.060483 0.082117 0.1371520 0.083843 3 0.403375 0.461986 -0.06784646 7 0.402984 0.426604 -0.02361944 0.9973152 0.19572312 insignificant 1 1.00000 insignificant 0.9990536 0.3001059 insignificant 1 1.00000 insignificant -0.06246865 0.3151675 insignificant 1 insignificant 0.403252 0.2069171 0.2027372 5 0.416914 0.300498 0.11641609 4.4981e-07 9.8685e-01 hypermethylated 3.7799e-06 1.0000e+00 hypermethylated 1.8050e-04 9.9671e-01 hypermethylated 1.9835e-03 1.0000e+00 hypermethylated 0.1353199 3.6184e-02 weaklyHypermeth 2.7206e-01 insignificant 0.403066 0.0792453 0.3188448 5 0.377950 0.105148 0.27280169 8.5105e-15 1.0000e+00 hypermethylated 5.0062e-13 1.0000e+00 hypermethylated 2.8285e-11 1.0000e+00 hypermethylated 3.5356e-09 1.0000e+00 hypermethylated 0.3120285 2.1627e-08 hypermethylated 7.2090e-06 hypermethylated 0.462955 0.2069171 0.25240192 10 0.467480 0.300498 0.16698164 1.4798e-09 9.9917e-01 hypermethylated 1.9471e-08 1.0000e+00 hypermethylated 8.0718e-07 9.9988e-01 hypermethylated 1.6144e-05 1.0000e+00 hypermethylated 0.1977886 1.1748e-02 weaklyHypermeth 1.2112e-01 insignificant 0.461815 0.0787911 0.38481880 7 0.406369 0.052501 3.5387e-01 1.4856e-16 1.0000e+00 hypermethylated 1.3505e-14 1.000000 hypermethylated 1.2535e-11 1.00000000 hypermethylated 2.0892e-09 1.00000 hypermethylated 0.37449717 9.3937e-06 hypermethylated 1.0437e-03 hypermethylated 0.2061114 0.0789189 0.1164632 7 0.290318 0.060578 2.2974e-01 2.4657e-06 1.0000e+00 weaklyHypermeth 8.2188e-04 1.0000e+00 weaklyHypermeth 6.5379e-04 1.0000e+00 weaklyHypermeth 1.6345e-01 1.0000e+00 insignificant 0.1767086 1.0386e-02 weaklyHypermeth 0.13314746 insignificant chr1 22424606 22425606 790 WNT4 ENSG00000162552 0.636104 111 4 0.710884 138 4 0.791169 60 4 0.4509774 94 4 0.561355 53 4 0.7646505 134 5 0.7839379 78 4 0.785142 119 4 0.875000 31 2 0.675776 49 4 0.8345133 213 5 0.777778 25 3 0.845833 37 2 0.512360 36 2 0.508670 59 4 0.583333 20 2 NA 0 0 0.7979006 69 3 0.860881 121 5 0.4910012 88 3 0.760868 67 4 0.510234 61 4 0.708469 52 5 0.843434 37 3 0.5252669 216 3 0.6493937 126 4 0.781111 47 3 0.6291667 22 2 0.757453 100 4 0.634259 213 5 0.622012 162 5 0.886578 137 5 0.5944341 101 4 0.4870510 70 3 0.6701389 69 4 0.6047619 90 4 0.4839506 99 4 0.5025293 187 5 0.3789351 168 4 0.524074 92 5 0.5003358 115 3 0.5524162 124 2 0.506046 124 4 0.535027 0.707782 0.647674 0.4740560 0.4843719 0.694028 0.7822937 0.7452032 0.6428571 0.5265170 0.8247857 0.9288063 0.6034799 0.465219 0.4243719 0.82783883 NA 0.5461717 0.7614157 0.333995 0.807860 0.3271641 0.518815 0.7684674 0.442830 0.5295332 0.602869 0.5283883 0.612536 0.336157 0.678878 0.851981 0.4228934 0.2627991 0.5243978 0.4510811 0.4129019 0.5732432 0.1925163 0.291412 0.130952 0.3368607 0.278264 1 0.706840 0.658320 0.03857177 5 0.716827 0.681035 0.03579184 0.1184512 0.23750191 insignificant 1 1.00000 insignificant 0.7348830 0.4098463 insignificant 1 1.00000 insignificant 0.00487073 0.9179081 lowCoverage 1 lowCoverage 0.706840 0.5472313 0.1517700 5 0.716827 0.584167 0.13266006 1.1757e-03 9.9725e-01 weaklyHypermeth 6.9161e-03 1.0000e+00 weaklyHypermeth 5.7709e-02 9.4861e-01 insignificant 3.2421e-01 1.0000e+00 insignificant 0.1400803 6.6527e-03 lowCoverage 7.6467e-02 lowCoverage 0.706840 0.3778135 0.3384761 4 0.716827 0.453594 0.26323240 6.0195e-11 7.0679e-01 lowCoverage 2.4078e-09 1.0000e+00 lowCoverage 1.0653e-06 5.2263e-01 lowCoverage 3.8047e-05 1.0000e+00 lowCoverage 0.2048632 3.3135e-04 lowCoverage 1.7439e-02 lowCoverage 0.658596 0.5463415 0.10984306 5 0.734196 0.486806 0.24739019 9.4016e-03 9.9933e-01 weaklyHypermeth 5.1096e-02 1.0000e+00 weaklyHypermeth 9.8410e-02 9.9750e-01 insignificant 5.2626e-01 1.0000e+00 insignificant 0.1352096 1.0899e-02 lowCoverage 1.1473e-01 lowCoverage 0.658596 0.3788122 0.28297348 4 0.734196 0.544662 1.8953e-01 7.3331e-07 9.6361e-01 lowCoverage 1.8803e-05 1.000000 lowCoverage 4.6734e-06 0.95675655 lowCoverage 1.7975e-04 1.00000 lowCoverage 0.19999248 6.7203e-04 lowCoverage 2.9219e-02 lowCoverage 0.5463415 0.3788122 0.1837790 4 0.486806 0.544662 -5.7856e-02 1.5600e-03 5.8424e-01 lowCoverage 1.0400e-01 1.0000e+00 lowCoverage 1.0195e-02 7.8485e-01 lowCoverage 6.7013e-01 1.0000e+00 lowCoverage 0.0647829 1.6903e-01 lowCoverage 1.00000000 lowCoverage chr1 22578294 22579294 798 ENSG00000198137 0.793281 237 4 0.790862 474 5 0.714872 134 5 0.7616708 138 5 0.786519 108 5 0.8243820 309 5 0.8032488 171 5 0.771304 214 5 0.780731 145 5 0.834738 74 5 0.7878802 358 5 0.893110 65 4 0.550127 168 5 0.776043 115 5 0.612495 172 5 0.357143 53 4 0.250000 4 0 0.5682706 236 4 0.674215 275 4 0.6323418 264 5 0.828734 96 5 0.565750 75 3 0.814963 117 5 0.618658 104 5 0.4133333 18 2 0.6771412 420 5 0.656355 137 5 0.8645786 80 4 0.655466 238 4 0.737672 414 5 0.659425 373 5 0.795851 231 5 0.0931122 244 5 0.0220648 142 4 0.1152542 301 4 0.0000000 4 0 0.0313248 328 5 0.0127952 450 5 0.4503789 321 5 0.495368 277 5 0.3396659 275 4 0.5516786 256 4 0.441237 221 5 0.725974 0.826396 0.697335 0.6975793 0.7538368 0.816572 0.7747430 0.8330490 0.7636655 0.7962610 0.7575859 0.8510940 0.5224644 0.759352 0.6524258 0.46496016 0.402916 0.5546743 0.6437022 0.603289 0.772737 0.4622143 0.707700 0.6553223 0.554414 0.6496535 0.647404 0.8100413 0.633552 0.734465 0.613255 0.782063 0.1029309 0.0259997 0.2071749 0.0104557 0.0391920 0.0170489 0.4012832 0.471948 0.319414 0.4735080 0.441921 4 0.742326 0.702128 0.04201171 5 0.737474 0.695232 0.04224213 0.0977812 0.98931581 insignificant 1 1.00000 insignificant 0.3685299 0.9119419 insignificant 1 1.00000 insignificant 0.00750118 0.8861517 lowCoverage 1 lowCoverage 0.742326 0.0803268 0.6602532 5 0.737474 0.062980 0.67449367 1.1432e-42 1.0000e+00 hypermethylated 6.0171e-41 1.0000e+00 hypermethylated 1.2640e-13 1.0000e+00 hypermethylated 6.6529e-12 1.0000e+00 hypermethylated 0.6524031 3.4795e-14 lowCoverage 3.4795e-12 lowCoverage 0.742326 0.5392593 0.2659313 5 0.737474 0.455389 0.28208484 2.7025e-13 1.0000e+00 hypermethylated 1.3513e-11 1.0000e+00 hypermethylated 7.4913e-09 1.0000e+00 hypermethylated 5.3510e-07 1.0000e+00 hypermethylated 0.2424961 2.8744e-04 lowCoverage 1.5969e-02 lowCoverage 0.702128 0.0803268 0.62256911 5 0.695232 0.062980 0.63225153 2.0625e-34 1.0000e+00 hypermethylated 1.2890e-32 1.0000e+00 hypermethylated 2.1820e-11 1.0000e+00 hypermethylated 1.2122e-09 1.0000e+00 hypermethylated 0.6449020 8.9758e-11 lowCoverage 1.2444e-08 lowCoverage 0.702128 0.5392593 0.22097331 5 0.695232 0.455389 2.3984e-01 6.2897e-11 1.0000e+00 hypermethylated 3.4943e-09 1.000000 hypermethylated 1.5051e-07 0.99999998 hypermethylated 1.0034e-05 1.00000 hypermethylated 0.23499490 5.5021e-04 lowCoverage 2.5010e-02 lowCoverage 0.0803268 0.5392593 -0.4299258 5 0.062980 0.455389 -3.9241e-01 1.0000e+00 2.3089e-16 hypomethylated 1.0000e+00 1.4430e-14 hypomethylated 1.0000e+00 2.6533e-06 hypomethylated 1.0000e+00 1.1536e-04 hypomethylated -0.4099071 3.5998e-05 lowCoverage 0.00355970 lowCoverage chr1 22724629 22725629 814 ZBTB40 ENSG00000184677 0.901276 410 7 0.912486 542 9 0.862302 222 9 0.9621756 223 7 0.887399 177 7 0.8380298 601 7 0.8777211 224 9 0.903439 224 7 0.832764 223 7 0.920593 180 8 0.8568972 394 9 0.989899 143 8 0.940370 236 8 0.940833 183 7 0.947211 273 7 0.614242 85 4 0.942857 32 3 0.7825835 266 8 0.788231 466 9 0.9373737 321 7 0.910131 95 7 0.970705 96 4 0.819422 285 9 0.930431 118 7 0.8163265 76 4 0.9563978 448 9 0.899242 241 8 0.8681088 173 8 0.920536 407 9 0.945368 477 8 0.914654 480 9 0.927820 388 9 0.9094610 302 7 0.9557858 165 9 0.6318182 137 6 0.9333333 11 1 0.9191326 224 7 0.9158442 449 9 0.9584369 425 7 0.967806 384 9 0.9267795 345 8 0.9385463 341 7 0.963462 259 8 0.847810 0.879431 0.900925 0.9171383 0.9225962 0.876266 0.9205600 0.9113095 0.8688245 0.9005878 0.8482185 0.9747752 0.9393376 0.912820 0.9061267 0.63120790 NA 0.9363479 0.9233611 0.881107 0.973376 0.9471588 0.920116 0.9050497 0.918106 0.9281769 0.831225 0.9396293 0.929127 0.925724 0.916674 0.925559 0.8435853 0.9478610 0.4327972 0.9305638 0.8679928 0.8312508 0.9462331 0.964507 0.952757 0.9322538 0.968676 4 0.900738 0.929595 -0.02851119 9 0.819935 0.872235 -0.05229988 0.9997781 0.02271506 weaklyHypometh 1 0.97039 insignificant 0.9988432 0.0538072 insignificant 1 1.00000 insignificant -0.02466095 0.3045357 insignificant 1 insignificant 0.900813 0.8842269 0.0195154 9 0.773116 0.781590 -0.00847330 7.7955e-01 1.6264e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7075e-01 7.0843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0043717 9.3682e-01 insignificant 1.0000e+00 insignificant 0.901312 0.9583571 -0.0503670 8 0.837543 0.961878 -0.12433520 1.0000e+00 2.6870e-04 weaklyHypometh 1.0000e+00 5.2019e-02 weaklyHypometh 9.9838e-01 2.5173e-03 weaklyHypometh 1.0000e+00 3.5961e-01 insignificant -0.0690718 2.5773e-03 weaklyHypometh 6.9656e-02 weaklyHypometh 0.929899 0.8850039 0.05145656 9 0.900868 0.858513 0.04235514 4.8410e-01 8.1645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3191e-01 9.5696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0290326 5.9464e-01 insignificant 1.0000e+00 insignificant 0.930467 0.9583808 -0.02377882 8 0.952150 0.964810 -1.2660e-02 9.7748e-01 7.4435e-02 insignificant 1.0000e+00 1.000000 insignificant 8.0483e-01 0.28074296 insignificant 1.0000e+00 1.00000 insignificant -0.04441087 1.5415e-02 weaklyHypometh 3.0914e-01 insignificant 0.8849145 0.9583571 -0.0694884 8 0.846722 0.961878 -1.1516e-01 9.6590e-01 3.1847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8234e-01 3.4854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0734435 2.0083e-01 insignificant 1.00000000 insignificant chr1 22781584 22782584 818 EPHA8 ENSG00000070886 0.953118 125 6 0.843793 130 7 0.825488 196 7 0.9480707 161 5 0.633861 75 4 0.9067870 248 6 0.8137076 93 7 0.909655 161 7 0.869091 158 7 0.886121 235 7 0.8855861 198 7 0.790322 150 7 0.909064 207 7 0.905337 128 5 0.894602 277 7 0.773667 101 6 0.586905 36 4 0.9083811 158 5 0.898050 189 7 0.9285821 118 7 0.902071 98 7 0.750740 121 5 0.837476 155 7 0.968537 109 7 0.8142702 93 5 0.8947786 172 7 0.854075 179 7 0.8919173 149 6 0.932955 150 7 0.945881 144 7 0.851653 115 7 0.861555 131 7 0.4400233 169 7 0.5407102 104 7 0.6604938 195 6 0.4428571 45 2 0.6345018 166 7 0.5416795 214 7 0.8797016 170 6 0.733123 116 7 0.9341468 157 6 0.8397875 128 6 0.680223 168 6 0.972803 0.827733 0.850788 0.9330707 0.8194602 0.912061 0.8895217 0.9196077 0.9098129 0.9139282 0.9379208 0.8399643 0.9187637 0.902060 0.9063698 0.79859077 0.526223 0.8806352 0.9367006 0.978446 0.953095 0.8576168 0.876629 0.9763527 0.974262 0.9010372 0.875211 0.9407178 0.933262 0.934609 0.888787 0.866550 0.4863961 0.5571325 0.6647497 0.5586285 0.6339691 0.6728214 0.8858558 0.838122 0.924868 0.8430254 0.820031 5 0.887723 0.903465 -0.02135350 7 0.857246 0.784978 0.07226765 0.8424960 0.12681874 insignificant 1 1.00000 insignificant 0.9655834 0.1740314 insignificant 1 1.00000 insignificant -0.02198291 0.4350064 insignificant 1 insignificant 0.887862 0.5587906 0.3113757 7 0.865424 0.557262 0.30816170 2.1198e-26 9.9991e-01 hypermethylated 6.4235e-25 1.0000e+00 hypermethylated 2.9505e-09 9.9981e-01 hypermethylated 8.1958e-08 1.0000e+00 hypermethylated 0.3101318 7.0769e-05 hypermethylated 1.8965e-03 hypermethylated 0.887723 0.8565629 0.0368104 6 0.857246 0.815906 0.04133947 4.1340e-03 9.7891e-01 weaklyHypermeth 4.6535e-02 1.0000e+00 weaklyHypermeth 5.2240e-02 9.9099e-01 insignificant 5.7406e-01 1.0000e+00 insignificant 0.0401130 4.6706e-01 insignificant 1.0000e+00 insignificant 0.904025 0.5587906 0.32539662 7 0.897118 0.557262 0.33985582 5.0128e-21 9.9916e-01 hypermethylated 1.6709e-19 1.0000e+00 hypermethylated 2.5376e-09 9.9980e-01 hypermethylated 8.4586e-08 1.0000e+00 hypermethylated 0.3321147 7.8712e-05 hypermethylated 2.0714e-03 hypermethylated 0.903465 0.8565629 0.05667129 6 0.784978 0.815906 -3.0928e-02 1.0916e-03 9.9894e-01 weaklyHypermeth 1.4176e-02 1.000000 weaklyHypermeth 1.2125e-02 0.99691367 weaklyHypermeth 1.6610e-01 1.00000 insignificant 0.06209590 2.6758e-01 insignificant 1.0000e+00 insignificant 0.5587906 0.8563686 -0.2589716 6 0.557262 0.789607 -2.3235e-01 9.9612e-01 1.1061e-07 hypomethylated 1.0000e+00 2.5500e-06 hypomethylated 9.9876e-01 1.3341e-04 hypomethylated 1.0000e+00 3.2540e-03 hypomethylated -0.2700188 1.9465e-03 weaklyHypometh 0.04325464 weaklyHypometh chr1 22872176 22873176 821 C1QB ENSG00000173369 0.499748 130 5 0.546066 428 5 0.527072 201 5 0.4096838 127 7 0.382869 155 5 0.4307911 305 8 0.7304588 160 5 0.585834 210 7 0.542332 181 5 0.663769 216 5 0.6864059 264 8 0.643137 114 5 0.099745 175 5 0.370370 127 5 0.391147 260 5 0.740000 32 3 0.666667 3 0 0.2099488 139 5 0.244909 405 7 0.1806374 218 5 0.550586 95 4 0.179297 108 5 0.559353 214 5 0.546176 88 7 0.5005634 91 8 0.3383196 370 7 0.513280 214 5 0.8032931 97 5 0.403294 333 5 0.161488 494 8 0.241058 454 8 0.836930 207 5 0.0043914 237 7 0.0216346 185 6 0.1666667 207 5 0.3802083 56 3 0.1512370 301 6 0.1573556 385 5 0.0257812 242 7 0.115240 190 8 0.1482280 107 5 0.0956221 111 5 0.220182 144 8 0.523532 0.569910 0.588388 0.4963143 0.6293780 0.473345 0.6287831 0.6884738 0.6109777 0.7335902 0.7560209 0.6311127 0.1514924 0.591528 0.4114571 0.83175596 0.649790 0.3511881 0.3247907 0.232716 0.667301 0.2124125 0.712347 0.4987569 0.480652 0.3982335 0.571207 0.7221470 0.554278 0.265732 0.304755 0.784373 0.0107970 0.0536956 0.0115999 0.2063253 0.0363181 0.0138822 0.0496800 0.160683 0.193268 0.2014914 0.135251 3 0.502338 0.452899 0.04759429 5 0.455903 0.520484 -0.06458085 0.5542833 0.99098092 insignificant 1 1.00000 insignificant 0.9583295 0.8642912 insignificant 1 1.00000 insignificant 0.00810972 0.9160240 insignificant 1 insignificant 0.502340 0.0264511 0.4771925 5 0.447084 0.127031 0.32005310 1.0792e-23 1.0000e+00 hypermethylated 2.8401e-22 1.0000e+00 hypermethylated 2.7436e-11 9.9968e-01 hypermethylated 1.1432e-09 1.0000e+00 hypermethylated 0.3306639 5.0910e-04 hypermethylated 1.0182e-02 hypermethylated 0.501953 0.1246851 0.3722467 5 0.407871 0.203203 0.20466857 1.0551e-15 1.0000e+00 hypermethylated 6.5942e-14 1.0000e+00 hypermethylated 1.7787e-11 9.9960e-01 hypermethylated 2.5410e-09 1.0000e+00 hypermethylated 0.3565687 2.3488e-06 hypermethylated 2.2626e-04 hypermethylated 0.452700 0.0291758 0.42755459 7 0.616387 0.218021 0.39836675 2.6625e-12 1.0000e+00 hypermethylated 4.5127e-11 1.0000e+00 hypermethylated 1.3309e-08 1.0000e+00 hypermethylated 3.7852e-07 1.0000e+00 hypermethylated 0.3225542 1.5537e-03 weaklyHypermeth 2.2195e-02 weaklyHypermeth 0.451308 0.1246851 0.32292758 5 0.360646 0.203203 1.5744e-01 3.6121e-10 1.0000e+00 hypermethylated 1.8060e-08 1.000000 hypermethylated 5.8097e-11 0.99999990 hypermethylated 6.4553e-09 1.00000 hypermethylated 0.34845898 1.8847e-04 hypermethylated 1.2565e-02 hypermethylated 0.0264706 0.1246851 -0.0981796 5 0.141146 0.203203 -6.2057e-02 9.9984e-01 1.5891e-03 weaklyHypometh 1.0000e+00 1.4579e-02 weaklyHypometh 9.9824e-01 6.1541e-03 weaklyHypometh 1.0000e+00 7.1559e-02 weaklyHypometh 0.0259048 6.9481e-01 insignificant 1.00000000 insignificant chr1 22872571 22873571 822 C1QB ENSG00000173369 0.428283 128 5 0.489324 427 5 0.459511 199 5 0.3253529 126 7 0.382869 155 5 0.3970945 299 7 0.6765505 157 5 0.539815 206 7 0.577165 178 5 0.621740 215 5 0.6535115 252 7 0.643137 114 5 0.099745 175 5 0.370370 127 5 0.397571 257 5 0.675000 31 3 0.666667 3 0 0.2449403 138 5 0.244909 405 7 0.1806374 218 5 0.486384 91 4 0.179297 108 5 0.496404 213 5 0.500794 82 6 0.4700317 84 7 0.2795081 366 7 0.443748 211 5 0.7814368 96 5 0.453706 332 5 0.130986 486 7 0.204066 448 7 0.697155 200 5 0.0050187 236 7 0.0247253 176 5 0.0000000 204 5 0.2500000 35 2 0.1680411 299 6 0.1493747 376 5 0.0294643 240 7 0.084084 184 7 0.1217843 104 5 0.0956221 111 5 0.206038 138 7 0.523532 0.569910 0.588388 0.4963143 0.6293780 0.473345 0.6287831 0.6884738 0.6109777 0.7335902 0.7560209 0.6311127 0.1514924 0.591528 0.4114571 0.83175596 0.649790 0.3511881 0.3247907 0.232716 0.667301 0.2124125 0.712347 0.4987569 0.480652 0.3982335 0.571207 0.7221470 0.554278 0.265732 0.304755 0.784373 0.0107970 0.0536956 0.0115999 0.2063253 0.0363181 0.0138822 0.0496800 0.160683 0.193268 0.2014914 0.135251 3 0.499213 0.448657 0.04726369 5 0.424622 0.502262 -0.07764000 0.6062287 0.98506039 insignificant 1 1.00000 insignificant 0.9618102 0.8368096 insignificant 1 1.00000 insignificant 0.02675000 0.7051650 insignificant 1 insignificant 0.499212 0.0241327 0.4750001 5 0.407871 0.128447 0.27942408 6.5665e-21 1.0000e+00 hypermethylated 1.4592e-19 1.0000e+00 hypermethylated 3.2548e-10 9.9871e-01 hypermethylated 1.1471e-08 1.0000e+00 hypermethylated 0.3541830 2.3392e-05 hypermethylated 8.0662e-04 hypermethylated 0.498816 0.1209781 0.3704854 5 0.358855 0.191838 0.16701685 3.9322e-14 1.0000e+00 hypermethylated 2.1845e-12 1.0000e+00 hypermethylated 1.4094e-10 9.9830e-01 hypermethylated 1.2813e-08 1.0000e+00 hypermethylated 0.3463110 9.9821e-07 hypermethylated 1.6637e-04 hypermethylated 0.447436 0.0241327 0.42424965 7 0.391653 0.128447 0.26320631 6.1846e-13 1.0000e+00 hypermethylated 1.0663e-11 1.0000e+00 hypermethylated 2.7058e-09 1.0000e+00 hypermethylated 8.7285e-08 1.0000e+00 hypermethylated 0.3274330 3.1366e-04 hypermethylated 6.4012e-03 hypermethylated 0.447028 0.1209781 0.32065419 5 0.315610 0.191838 1.2377e-01 4.3430e-09 1.0000e+00 hypermethylated 1.8882e-07 1.000000 hypermethylated 6.2500e-10 0.99999886 hypermethylated 5.6818e-08 1.00000 hypermethylated 0.31956100 1.7887e-04 hypermethylated 1.2565e-02 hypermethylated 0.0241509 0.1209781 -0.0963927 5 0.144503 0.191838 -4.7335e-02 9.9957e-01 2.0758e-03 weaklyHypometh 1.0000e+00 1.8701e-02 weaklyHypometh 9.9515e-01 8.1875e-03 weaklyHypometh 1.0000e+00 9.1994e-02 weaklyHypometh -0.0078720 8.8190e-01 insignificant 1.00000000 insignificant chr1 23007683 23008683 838 EPHB2 ENSG00000133216 0.844507 198 6 0.754987 136 6 0.789912 105 6 0.7870028 114 6 0.950456 99 6 0.8669926 271 6 0.7822334 89 6 0.850591 138 6 0.830150 102 6 0.885526 106 6 0.8201615 250 6 0.257516 70 5 0.872724 159 6 0.735714 57 4 0.807234 121 6 0.687293 77 4 0.200000 30 3 0.4030243 179 6 0.880540 215 6 0.8287402 200 6 0.853030 61 5 0.382930 72 3 0.869645 157 6 0.792768 113 6 0.6053241 49 3 0.8519773 247 6 0.606520 148 5 0.5990741 41 4 0.888376 174 6 0.896034 247 6 0.877206 246 6 0.870717 243 6 0.0395382 233 6 0.0442864 246 6 0.0051282 125 5 0.0000000 71 3 0.0492635 163 6 0.0425170 338 6 0.4107259 235 6 0.269449 268 6 0.2495224 140 5 0.1797218 237 6 0.363587 176 6 0.837906 0.702058 0.779986 0.7554810 0.9461778 0.839879 0.7791533 0.8411345 0.8336629 0.8592660 0.8263445 0.3039675 0.8356972 0.720097 0.8173613 0.69273887 0.401405 0.4108724 0.8652542 0.856718 0.842589 0.5520555 0.846552 0.7891251 0.701036 0.8297512 0.839890 0.6925130 0.870976 0.877744 0.871508 0.881563 0.0393331 0.0214928 0.0045072 0.0313618 0.0550578 0.0515718 0.3891609 0.234448 0.261172 0.1589416 0.329785 5 0.782032 0.833704 -0.05509381 6 0.718265 0.719952 -0.00168703 0.9883655 0.07039635 insignificant 1 1.00000 insignificant 0.9692934 0.2280821 insignificant 1 1.00000 insignificant -0.01603482 0.8122945 insignificant 1 insignificant 0.782032 0.0408163 0.7457972 6 0.718265 0.029793 0.68847239 4.6512e-45 1.0000e+00 hypermethylated 2.9070e-43 1.0000e+00 hypermethylated 1.4825e-15 1.0000e+00 hypermethylated 1.1404e-13 1.0000e+00 hypermethylated 0.7116431 1.6994e-12 hypermethylated 1.2138e-10 hypermethylated 0.782529 0.2774621 0.4953611 6 0.782420 0.304823 0.47759798 3.0806e-26 1.0000e+00 hypermethylated 5.5773e-24 1.0000e+00 hypermethylated 7.3461e-11 1.0000e+00 hypermethylated 7.3461e-09 1.0000e+00 hypermethylated 0.4471640 2.7152e-06 hypermethylated 2.2626e-04 hypermethylated 0.833704 0.0408163 0.80270304 6 0.719952 0.029793 0.69015942 8.6499e-49 1.0000e+00 hypermethylated 8.6499e-47 1.0000e+00 hypermethylated 1.5313e-12 1.0000e+00 hypermethylated 1.0938e-10 1.0000e+00 hypermethylated 0.7276779 5.8416e-09 hypermethylated 4.4935e-07 hypermethylated 0.834168 0.2774621 0.54593620 6 0.839944 0.304823 5.3512e-01 5.9311e-33 1.0000e+00 hypermethylated 2.9655e-30 1.000000 hypermethylated 8.9614e-12 1.00000000 hypermethylated 1.7923e-09 1.00000 hypermethylated 0.46319877 5.2184e-06 hypermethylated 7.4548e-04 hypermethylated 0.0408511 0.2774621 -0.2500612 6 0.034758 0.304823 -2.7006e-01 1.0000e+00 5.9550e-15 hypomethylated 1.0000e+00 2.9775e-13 hypomethylated 1.0000e+00 1.5944e-08 hypomethylated 1.0000e+00 1.3287e-06 hypomethylated -0.2644791 2.4598e-03 weaklyHypometh 0.04689391 weaklyHypometh chr1 23007879 23008879 839 EPHB2 ENSG00000133216 0.844507 198 6 0.754987 136 6 0.789912 105 6 0.7870028 114 6 0.950456 99 6 0.8669926 271 6 0.7822334 89 6 0.850591 138 6 0.830150 102 6 0.885526 106 6 0.8201615 250 6 0.257516 70 5 0.872724 159 6 0.735714 57 4 0.807234 121 6 0.687293 77 4 0.200000 30 3 0.4030243 179 6 0.880540 215 6 0.8287402 200 6 0.853030 61 5 0.382930 72 3 0.869645 157 6 0.792768 113 6 0.6053241 49 3 0.8519773 247 6 0.606520 148 5 0.5990741 41 4 0.888376 174 6 0.896034 247 6 0.877206 246 6 0.870717 243 6 0.0395382 233 6 0.0442864 246 6 0.0051282 125 5 0.0000000 71 3 0.0492635 163 6 0.0425170 338 6 0.4107259 235 6 0.269449 268 6 0.2495224 140 5 0.1797218 237 6 0.363587 176 6 0.837906 0.702058 0.779986 0.7554810 0.9461778 0.839879 0.7791533 0.8411345 0.8336629 0.8592660 0.8263445 0.3039675 0.8356972 0.720097 0.8173613 0.69273887 0.401405 0.4108724 0.8652542 0.856718 0.842589 0.5520555 0.846552 0.7891251 0.701036 0.8297512 0.839890 0.6925130 0.870976 0.877744 0.871508 0.881563 0.0393331 0.0214928 0.0045072 0.0313618 0.0550578 0.0515718 0.3891609 0.234448 0.261172 0.1589416 0.329785 5 0.782032 0.833704 -0.05509381 6 0.718265 0.719952 -0.00168703 0.9883655 0.07039635 insignificant 1 1.00000 insignificant 0.9692934 0.2280821 insignificant 1 1.00000 insignificant -0.01603482 0.8122945 insignificant 1 insignificant 0.782032 0.0408163 0.7457972 6 0.718265 0.029793 0.68847239 4.6512e-45 1.0000e+00 hypermethylated 2.9070e-43 1.0000e+00 hypermethylated 1.4825e-15 1.0000e+00 hypermethylated 1.1404e-13 1.0000e+00 hypermethylated 0.7116431 1.6994e-12 hypermethylated 1.2138e-10 hypermethylated 0.782529 0.2774621 0.4953611 6 0.782420 0.304823 0.47759798 3.0806e-26 1.0000e+00 hypermethylated 5.5773e-24 1.0000e+00 hypermethylated 7.3461e-11 1.0000e+00 hypermethylated 7.3461e-09 1.0000e+00 hypermethylated 0.4471640 2.7152e-06 hypermethylated 2.2626e-04 hypermethylated 0.833704 0.0408163 0.80270304 6 0.719952 0.029793 0.69015942 8.6499e-49 1.0000e+00 hypermethylated 8.6499e-47 1.0000e+00 hypermethylated 1.5313e-12 1.0000e+00 hypermethylated 1.0938e-10 1.0000e+00 hypermethylated 0.7276779 5.8416e-09 hypermethylated 4.4935e-07 hypermethylated 0.834168 0.2774621 0.54593620 6 0.839944 0.304823 5.3512e-01 5.9311e-33 1.0000e+00 hypermethylated 2.9655e-30 1.000000 hypermethylated 8.9614e-12 1.00000000 hypermethylated 1.7923e-09 1.00000 hypermethylated 0.46319877 5.2184e-06 hypermethylated 7.4548e-04 hypermethylated 0.0408511 0.2774621 -0.2500612 6 0.034758 0.304823 -2.7006e-01 1.0000e+00 5.9550e-15 hypomethylated 1.0000e+00 2.9775e-13 hypomethylated 1.0000e+00 1.5944e-08 hypomethylated 1.0000e+00 1.3287e-06 hypomethylated -0.2644791 2.4598e-03 weaklyHypometh 0.04689391 weaklyHypometh chr1 23018336 23019336 840 EPHB2 ENSG00000133216 0.897711 126 4 0.795770 162 5 0.762698 65 4 0.9041456 111 4 0.826667 49 5 0.8085639 188 4 0.8429027 60 4 0.798453 108 5 0.902198 66 4 0.900476 53 3 0.9177598 151 5 0.682540 11 1 0.912821 106 3 0.883333 62 3 0.883333 37 2 0.933333 17 2 NA 0 0 0.6364842 125 3 0.939103 98 2 0.7370945 104 3 0.933333 26 2 0.662500 46 3 0.817978 70 3 0.686975 40 2 0.9296172 71 4 0.8502924 180 4 0.966207 60 4 0.7413420 38 3 0.889057 129 3 0.901725 221 5 0.873235 223 5 0.928198 139 4 0.8515637 101 5 0.6429513 63 3 1.0000000 112 3 0.8438095 79 3 0.8713698 99 5 0.8125473 210 5 0.5815296 73 3 0.832437 88 4 0.5738947 105 4 0.5779848 63 2 0.839098 98 5 0.832436 0.788296 0.775896 0.8289118 0.8865979 0.810822 0.7298377 0.8172124 0.8602583 0.8300196 0.8677834 0.7086495 0.8901665 0.859107 0.7757732 0.81890967 NA 0.7139218 0.9177962 0.713334 0.896907 0.7268041 0.787474 0.4936542 0.904558 0.8323147 0.961429 0.8252443 0.805311 0.890434 0.874363 0.861813 0.8353710 0.7010581 0.9399754 0.8566519 0.8825372 0.8894946 0.5827122 0.791839 0.665003 0.7235598 0.770328 2 0.801648 0.843121 -0.04242200 5 0.835951 0.856247 -0.02029578 0.8818886 0.09522214 insignificant 1 1.00000 insignificant 0.9449140 0.1376145 insignificant 1 1.00000 insignificant -0.00808820 0.8211428 lowCoverage 1 lowCoverage 0.801648 0.8644578 -0.0672707 5 0.835951 0.836850 -0.00089829 3.3112e-01 1.2494e-02 weaklyHypometh 1.0000e+00 6.5760e-01 insignificant 5.0108e-01 1.6621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0032432 9.5115e-01 lowCoverage 1.0000e+00 lowCoverage 0.801648 0.6510539 0.1156429 4 0.835951 0.738558 0.09739338 1.6575e-03 9.9183e-01 lowCoverage 2.1250e-02 1.0000e+00 lowCoverage 7.6745e-03 9.9279e-01 lowCoverage 1.1229e-01 1.0000e+00 lowCoverage 0.1592947 6.3189e-02 lowCoverage 6.4479e-01 lowCoverage 0.843121 0.8644578 -0.02278954 5 0.856247 0.836850 0.01939749 4.1545e-01 2.5208e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1959e-01 3.2255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0113314 8.4222e-01 lowCoverage 1.0000e+00 lowCoverage 0.843121 0.6510539 0.17792373 4 0.856247 0.738558 1.1769e-01 1.5790e-04 9.9719e-01 lowCoverage 2.4672e-03 1.000000 lowCoverage 4.5507e-04 0.99988707 lowCoverage 1.0375e-02 1.00000 lowCoverage 0.16738293 5.4469e-02 lowCoverage 6.0521e-01 lowCoverage 0.8644578 0.6510539 0.1893840 4 0.836850 0.738558 9.8292e-02 6.4929e-03 8.6795e-01 lowCoverage 3.0919e-01 1.0000e+00 lowCoverage 1.9487e-02 9.8648e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1560515 8.4050e-02 lowCoverage 0.62724146 lowCoverage chr1 23048560 23049560 843 EPHB2 ENSG00000133216 0.607143 49 2 0.698974 121 5 0.610751 89 5 0.9264706 41 3 0.600379 72 4 0.8015568 153 5 0.5323653 96 5 0.770694 81 5 0.609744 54 5 0.653852 58 4 0.7630424 130 5 0.945000 49 2 0.781181 75 4 0.714646 24 2 0.655932 72 5 0.352414 58 2 0.666667 21 2 0.5570370 72 3 0.652637 96 4 0.7911765 106 5 0.802271 71 4 0.733333 16 2 0.745714 45 5 0.625556 55 5 0.2777778 14 2 0.6582086 128 5 0.727339 51 4 0.6636364 26 2 0.724222 79 5 0.675162 126 5 0.805699 117 5 0.885637 90 4 0.5152767 114 5 0.7204545 78 4 0.7851852 129 4 0.6666667 5 0 0.7129371 72 5 0.5031934 89 5 0.6719697 31 3 0.637679 80 4 0.9333333 21 2 0.4993271 51 3 0.705128 32 2 0.628496 0.665202 0.602361 0.8879552 0.4451058 0.758547 0.5181377 0.7319112 0.5697192 0.5344304 0.7245671 0.9936508 0.7305839 0.675655 0.6558957 0.27079790 0.556858 0.6443269 0.5241497 0.676860 0.734554 0.6761905 0.725624 0.5308642 0.341658 0.5561879 0.685823 0.7101972 0.773177 0.627834 0.762526 0.807550 0.5657143 0.7710438 0.8930041 0.7200856 0.6987734 0.6555409 0.7028379 0.565476 0.885714 0.5545204 0.640619 1 0.694792 0.699267 -0.01799192 5 0.700459 0.716936 -0.01647751 0.8705361 0.46474085 insignificant 1 1.00000 insignificant 0.9224007 0.3876182 insignificant 1 1.00000 insignificant -0.00912987 0.8647114 lowCoverage 1 lowCoverage 0.694792 0.7002053 -0.0057520 5 0.700459 0.664714 0.03574470 6.1848e-05 8.8134e-03 weaklyHypometh 4.2653e-04 4.8963e-01 weaklyHypometh 3.8257e-02 2.9890e-02 weaklyHypometh 2.2372e-01 1.0000e+00 insignificant 0.0339641 5.6017e-01 lowCoverage 1.0000e+00 lowCoverage 0.694792 0.6139535 0.0400677 2 0.700459 0.654232 0.04622690 1.4628e-01 8.6184e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2309e-01 6.9769e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0049043 9.5118e-01 lowCoverage 1.0000e+00 lowCoverage 0.699267 0.7002053 -0.01745983 5 0.716936 0.664714 0.05222221 2.0975e-03 4.6176e-02 weaklyHypometh 1.2485e-02 1.0000e+00 weaklyHypometh 6.0559e-02 7.2461e-02 insignificant 3.4214e-01 1.0000e+00 insignificant 0.0430940 5.1368e-01 lowCoverage 1.0000e+00 lowCoverage 0.699267 0.6139535 0.06065398 2 0.716936 0.654232 6.2704e-02 1.2639e-01 8.5534e-01 lowCoverage 9.2240e-01 1.000000 lowCoverage 5.0590e-01 0.83511767 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.00422555 9.6057e-01 lowCoverage 1.0000e+00 lowCoverage 0.7002053 0.6139535 0.1687868 2 0.664714 0.654232 1.0482e-02 3.9125e-02 2.1455e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.3618e-01 3.4112e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0388685 6.5992e-01 lowCoverage 1.00000000 lowCoverage chr1 23075450 23076450 846 EPHB2 ENSG00000133216 0.545212 194 9 0.574218 158 7 0.552111 182 8 0.5146548 197 7 0.530060 74 3 0.5677116 227 9 0.6395692 45 5 0.522315 258 9 0.469933 166 7 0.609829 187 9 0.7572704 184 7 0.491319 60 5 0.463213 311 9 0.572684 171 9 0.407049 251 7 0.523810 78 5 0.285714 12 0 0.4122725 297 7 0.525040 221 7 0.3859397 182 9 0.551023 96 7 0.298108 221 9 0.529666 107 6 0.535717 147 7 0.4350000 81 5 0.5346047 300 9 0.564547 219 8 0.4514104 142 9 0.521436 145 7 0.459614 272 9 0.519253 195 9 0.760520 202 8 0.5334979 103 6 0.6093891 122 8 0.4244898 185 5 0.6345238 29 3 0.5282564 144 6 0.4535483 174 9 0.4098044 241 8 0.353097 209 9 0.2769288 206 7 0.2306362 155 5 0.384943 158 8 0.779299 0.598598 0.562231 0.6391873 0.6567884 0.669760 0.7036964 0.6311589 0.6097604 0.6457672 0.7298810 0.5867160 0.5193126 0.596126 0.5408339 0.40671227 0.369633 0.3622400 0.5647177 0.385971 0.563896 0.4440936 0.695065 0.6076938 0.525608 0.5987017 0.616852 0.5836013 0.698571 0.551828 0.605300 0.832582 0.5932526 0.5068489 0.8215542 0.5842704 0.3839455 0.3749240 0.4983196 0.465438 0.236863 0.2443452 0.502130 3 0.540955 0.561824 -0.02060413 7 0.479861 0.479395 0.00046646 0.7437310 0.23919326 insignificant 1 1.00000 insignificant 0.7658427 0.4885323 insignificant 1 1.00000 insignificant 0.00408800 0.9156892 insignificant 1 insignificant 0.540955 0.4861295 0.0476474 7 0.479861 0.576029 -0.09616741 1.0311e-04 6.4921e-03 weaklyHypermeth 6.8743e-04 4.0576e-01 weaklyHypermeth 3.4343e-02 1.7802e-01 weaklyHypermeth 2.0564e-01 1.0000e+00 insignificant -0.0131213 7.5312e-01 insignificant 1.0000e+00 insignificant 0.541292 0.2538700 0.2049887 7 0.500758 0.374858 0.12589996 2.5193e-07 9.9999e-01 hypermethylated 6.6297e-06 1.0000e+00 hypermethylated 2.1537e-05 1.0000e+00 hypermethylated 5.8208e-04 1.0000e+00 hypermethylated 0.1864144 1.7120e-03 weaklyHypermeth 5.5227e-02 weaklyHypermeth 0.561824 0.4861295 0.09078983 7 0.479395 0.576029 -0.09663387 1.9646e-03 1.7216e-03 weaklyHypermeth 1.1833e-02 2.4594e-01 weaklyHypermeth 7.9594e-02 1.9383e-01 insignificant 4.3494e-01 1.0000e+00 insignificant -0.0172093 7.1293e-01 insignificant 1.0000e+00 insignificant 0.561586 0.2538700 0.21999143 8 0.466158 0.374858 9.1300e-02 1.7767e-07 9.9988e-01 hypermethylated 5.5523e-06 1.000000 hypermethylated 5.2032e-06 0.99992978 hypermethylated 1.8299e-04 1.00000 hypermethylated 0.18232635 2.1817e-03 weaklyHypermeth 8.0805e-02 weaklyHypermeth 0.4847278 0.2538700 0.1808408 7 0.560213 0.374858 1.8536e-01 1.7621e-05 6.8644e-01 weaklyHypermeth 3.5242e-03 1.0000e+00 weaklyHypermeth 6.4954e-03 8.9998e-01 weaklyHypermeth 5.5366e-01 1.0000e+00 insignificant 0.1995357 2.4107e-03 weaklyHypermeth 0.04689391 weaklyHypermeth chr1 23120017 23121017 847 EPHB2 ENSG00000133216 0.930963 137 6 0.762599 389 6 0.795091 226 6 0.9008453 149 6 0.851312 104 6 0.8788599 271 6 0.8109605 187 6 0.908649 237 6 0.859006 146 6 0.927677 144 6 0.8960401 355 6 0.845347 96 6 0.945560 154 6 0.900490 120 6 0.875849 230 6 0.723595 69 3 0.666667 6 0 0.9093557 132 6 0.855214 220 6 0.9429894 228 6 0.896158 97 6 0.900353 86 5 0.815836 142 6 0.768071 99 5 0.9147870 63 3 0.9346870 424 6 0.803547 191 6 0.8004477 145 6 0.827318 213 6 0.921418 510 6 0.916368 490 6 0.907676 226 6 0.7245757 285 6 0.7377081 108 6 0.8121663 320 6 0.4323232 28 3 0.5970806 168 6 0.7672368 423 6 0.8813429 161 6 0.907289 135 6 0.9278846 82 3 0.9175953 78 3 0.906920 97 6 0.902850 0.716319 0.778984 0.9080815 0.8333971 0.821594 0.7549109 0.8374986 0.8396890 0.8941433 0.8737997 0.8252773 0.9078693 0.872689 0.8273652 0.74128635 0.765791 0.8912885 0.8723986 0.919717 0.799779 0.8823971 0.790404 0.6981460 0.854263 0.9246366 0.760186 0.8736424 0.875267 0.902839 0.888977 0.899294 0.6980730 0.8384568 0.6351413 0.4519235 0.6921380 0.6840114 0.8485040 0.916584 0.864771 0.8486171 0.851644 3 0.858056 0.886448 -0.02264876 6 0.871339 0.893200 -0.02186076 0.9654155 0.15313341 insignificant 1 1.00000 insignificant 0.5215880 0.4683050 insignificant 1 1.00000 insignificant -0.00786862 0.7441709 insignificant 1 insignificant 0.858056 0.7214715 0.1472318 6 0.871339 0.741462 0.12987786 6.4625e-07 9.9990e-01 weaklyHypermeth 5.3409e-06 1.0000e+00 weaklyHypermeth 2.2815e-03 9.9828e-01 weaklyHypermeth 1.7573e-02 1.0000e+00 weaklyHypermeth 0.1808383 2.3765e-02 weaklyHypermeth 1.9640e-01 insignificant 0.858056 0.8752260 -0.0247090 6 0.871339 0.894808 -0.02346836 5.5175e-01 9.0678e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3902e-01 3.9499e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0488529 1.4270e-02 lowCoverage 2.4187e-01 lowCoverage 0.886448 0.7214715 0.16104632 6 0.893200 0.741462 0.15173862 2.6253e-06 9.9998e-01 weaklyHypermeth 2.2439e-05 1.0000e+00 weaklyHypermeth 2.6995e-03 9.9902e-01 weaklyHypermeth 2.2496e-02 1.0000e+00 weaklyHypermeth 0.1887069 2.0130e-02 weaklyHypermeth 1.8467e-01 insignificant 0.886448 0.8752260 0.00037052 6 0.893200 0.894808 -1.6076e-03 5.9122e-01 5.1333e-01 insignificant 1.0000e+00 1.000000 insignificant 9.5158e-01 0.06987948 insignificant 1.0000e+00 1.00000 insignificant -0.04098426 4.5535e-02 lowCoverage 5.3571e-01 lowCoverage 0.7214715 0.8752260 -0.1814731 6 0.741462 0.894808 -1.5335e-01 9.9979e-01 1.4220e-03 weaklyHypometh 1.0000e+00 1.3542e-02 weaklyHypometh 9.9997e-01 3.5721e-03 weaklyHypometh 1.0000e+00 4.8272e-02 weaklyHypometh -0.2296912 9.8961e-03 lowCoverage 0.12852130 lowCoverage chr1 23153948 23154948 848 EPHB2 ENSG00000133216 0.835209 163 5 0.773644 190 5 0.756510 185 5 0.9322001 169 4 0.823702 121 5 0.8389622 314 5 0.7746750 128 5 0.839062 198 5 0.782090 201 5 0.896768 151 5 0.8536464 184 5 0.934411 97 4 0.781678 160 4 0.834347 130 5 0.811863 226 5 0.856942 80 3 0.711905 32 4 0.8455188 176 4 0.894023 155 5 0.8976312 180 5 0.847619 52 5 0.903388 75 4 0.894597 141 5 0.743711 122 5 0.8281499 54 4 0.9146284 204 5 0.805083 132 5 0.8926058 122 5 0.850208 137 5 0.921143 245 5 0.862720 199 5 0.884123 214 5 0.6392461 187 5 0.5355556 84 5 0.7580559 207 4 0.6619048 21 2 0.5402536 249 5 0.8255324 190 5 0.9277747 206 5 0.942866 122 5 0.9014919 150 5 0.9222687 119 4 0.881902 152 5 0.844356 0.796592 0.841182 0.9044420 0.8416141 0.836123 0.9291414 0.8531903 0.8320712 0.8953790 0.8661458 0.9244174 0.8750904 0.853410 0.8735703 0.80464197 0.711486 0.9200144 0.8993333 0.874173 0.840246 0.8722332 0.905470 0.7873171 0.812126 0.9087814 0.795663 0.8787621 0.857254 0.927221 0.866659 0.892072 0.7279102 0.5718638 0.7398201 0.6233999 0.7093407 0.7777406 0.9301548 0.934689 0.938755 0.9152274 0.942153 4 0.859259 0.866824 -0.01469014 5 0.816963 0.889815 -0.07285238 0.9392034 0.21929144 insignificant 1 1.00000 insignificant 0.9511918 0.1672004 insignificant 1 1.00000 insignificant -0.02859207 0.1628388 lowCoverage 1 lowCoverage 0.859259 0.6876333 0.1589290 5 0.816963 0.586839 0.23012314 1.0290e-10 9.9991e-01 weaklyHypermeth 1.2549e-09 1.0000e+00 weaklyHypermeth 2.7041e-06 9.9947e-01 weaklyHypermeth 4.5069e-05 1.0000e+00 weaklyHypermeth 0.1736480 1.3050e-02 lowCoverage 1.3182e-01 lowCoverage 0.859438 0.9279039 -0.0700840 5 0.847022 0.918608 -0.07158583 9.9993e-01 2.4998e-04 weaklyHypometh 1.0000e+00 5.2019e-02 weaklyHypometh 9.9915e-01 1.3573e-04 weaklyHypometh 1.0000e+00 6.4071e-02 weaklyHypometh -0.0815213 1.6140e-04 lowCoverage 9.4943e-03 lowCoverage 0.866824 0.6876333 0.17222229 5 0.889815 0.586839 0.30297552 2.0481e-07 1.0000e+00 weaklyHypermeth 2.0899e-06 1.0000e+00 weaklyHypermeth 1.5184e-05 9.9998e-01 weaklyHypermeth 2.4490e-04 1.0000e+00 weaklyHypermeth 0.2022400 6.5236e-03 lowCoverage 7.7661e-02 lowCoverage 0.866745 0.9279039 -0.05736295 5 0.867778 0.918608 -5.0830e-02 9.9743e-01 1.7944e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6017e-01 0.01273165 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.05292919 1.1388e-02 lowCoverage 2.4758e-01 lowCoverage 0.6883671 0.9279039 -0.2297726 5 0.704207 0.918608 -2.1440e-01 1.0000e+00 5.7269e-08 hypomethylated 1.0000e+00 1.3635e-06 hypomethylated 9.9966e-01 4.4026e-05 hypomethylated 1.0000e+00 1.2230e-03 hypomethylated -0.2551692 2.4854e-03 lowCoverage 0.04689391 lowCoverage chr1 23779972 23780972 872 ID3 ENSG00000117318 0.706267 208 6 0.601804 191 8 0.576007 106 8 0.6028846 116 5 0.836310 52 5 0.7374044 228 8 0.6510985 158 6 0.735907 113 8 0.615224 82 7 0.680561 130 8 0.7320778 231 8 0.606463 73 7 0.582810 178 8 0.750000 12 1 0.659623 126 8 0.586414 55 5 0.622611 60 5 0.5749441 149 6 0.632993 178 8 0.7397206 208 8 0.705580 49 4 0.525866 74 7 0.638500 120 7 0.695337 79 7 0.7412698 22 2 0.6605611 176 8 0.772915 84 7 0.7916667 32 2 0.698346 118 8 0.707328 202 8 0.670089 147 8 0.689808 312 7 0.6473214 100 8 0.7122110 145 8 0.7157749 96 7 0.4784261 68 5 0.7063718 73 7 0.6362329 173 8 0.5373255 192 7 0.701838 236 8 0.5789611 125 5 0.5358234 206 7 0.569038 170 5 0.679513 0.596751 0.560624 0.7010889 0.7904762 0.738468 0.6514345 0.7297654 0.5836202 0.7009960 0.7303967 0.6370998 0.6051041 NA 0.6901364 0.64076566 0.630798 0.6957126 0.5981314 0.740169 0.708659 0.6980193 0.657114 0.7068475 0.706179 0.6628196 0.774543 0.7519026 0.705836 0.720011 0.685551 0.709110 0.6899688 0.6639190 0.6267446 0.5503312 0.6650359 0.6241528 0.6033197 0.717918 0.718078 0.7040755 0.605554 5 0.684627 0.728622 -0.02826743 8 0.661706 0.688265 -0.02655898 0.9851799 0.11132203 insignificant 1 1.00000 insignificant 0.9831425 0.0849574 insignificant 1 1.00000 insignificant -0.02988275 0.2570052 insignificant 1 insignificant 0.684627 0.7038168 0.0113969 8 0.661706 0.668958 -0.00725218 1.5259e-01 3.1265e-01 insignificant 6.7518e-01 1.0000e+00 insignificant 2.2746e-01 8.9304e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0121665 7.7252e-01 insignificant 1.0000e+00 insignificant 0.684627 0.6566200 0.0028948 7 0.661706 0.623598 0.03810741 9.9442e-02 6.8014e-01 insignificant 8.0195e-01 1.0000e+00 insignificant 1.3344e-01 5.4685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0769588 6.4646e-02 insignificant 6.4646e-01 insignificant 0.728622 0.7038168 0.03771996 8 0.688265 0.668958 0.01930680 3.6270e-03 5.5771e-01 weaklyHypermeth 2.1336e-02 1.0000e+00 weaklyHypermeth 2.1626e-02 9.7684e-01 weaklyHypermeth 1.4612e-01 1.0000e+00 insignificant 0.0420492 3.4513e-01 insignificant 1.0000e+00 insignificant 0.728622 0.6566200 0.03497178 7 0.688265 0.623598 6.4666e-02 5.8350e-02 9.6039e-01 insignificant 4.8223e-01 1.000000 insignificant 3.4270e-02 0.96019576 weaklyHypermeth 3.8505e-01 1.00000 insignificant 0.10684159 1.9917e-02 weaklyHypermeth 3.4942e-01 insignificant 0.7038168 0.6566200 -0.0095980 7 0.668958 0.623598 4.5360e-02 1.3903e-01 1.1294e-01 insignificant 1.0000e+00 6.1378e-01 insignificant 3.3045e-01 2.4906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0647924 2.0974e-01 insignificant 1.00000000 insignificant chr1 25103551 25104551 895 CLIC4 ENSG00000169504 0.833370 288 7 0.776515 166 7 0.733576 212 7 0.8819728 162 7 0.720356 95 7 0.8974030 272 7 0.8642518 154 7 0.845815 186 7 0.833627 258 7 0.814431 292 7 0.8700054 175 7 0.876053 224 7 0.820966 252 7 0.789064 86 5 0.814823 258 7 0.911849 117 7 0.788908 91 6 0.5711513 196 7 0.845152 134 7 0.8393484 213 7 0.847882 123 7 0.556164 176 7 0.823058 173 7 0.839235 139 7 0.7595352 63 6 0.8175849 219 7 0.789843 118 7 0.8022476 169 7 0.899361 176 6 0.898538 207 7 0.843759 197 7 0.896028 272 7 0.8092687 180 7 0.4411529 114 6 1.0000000 70 5 0.8553133 74 6 0.7262754 136 7 0.8426548 202 7 0.5122809 224 7 0.664598 213 6 0.4728730 147 6 0.6087068 201 6 0.583510 172 7 0.846757 0.787975 0.732092 0.8861954 0.7176507 0.897002 0.8811900 0.8694223 0.8602891 0.8405790 0.9022964 0.8961766 0.8599092 0.799946 0.8238719 0.95086542 0.828643 0.6027161 0.8539470 0.844921 0.889560 0.5837625 0.821346 0.8484600 0.788259 0.8153807 0.831369 0.8386231 0.891664 0.912958 0.863876 0.910331 0.8098615 0.4912016 0.9276822 0.8520181 0.7694446 0.8654413 0.4531030 0.645436 0.447338 0.6369082 0.506040 6 0.826416 0.825702 -0.00311129 7 0.817997 0.806500 0.01149661 0.1899937 0.45456777 insignificant 1 1.00000 insignificant 0.4891219 0.4781265 insignificant 1 1.00000 insignificant 0.00199562 0.9504222 insignificant 1 insignificant 0.826416 0.7706186 0.0487113 7 0.817997 0.749881 0.06811585 9.0868e-05 5.2288e-01 weaklyHypermeth 6.1397e-04 1.0000e+00 weaklyHypermeth 1.4939e-01 2.9847e-01 insignificant 7.6047e-01 1.0000e+00 insignificant 0.0373211 6.5313e-01 insignificant 1.0000e+00 insignificant 0.826416 0.5041841 0.3215373 7 0.817997 0.552279 0.26571752 3.3464e-26 6.6830e-01 hypermethylated 5.5773e-24 1.0000e+00 hypermethylated 8.9784e-12 8.6299e-01 hypermethylated 1.4964e-09 1.0000e+00 hypermethylated 0.2480383 5.7078e-04 hypermethylated 2.5945e-02 hypermethylated 0.825702 0.7706186 0.05774847 7 0.806500 0.749881 0.05661925 1.3543e-03 4.0462e-01 weaklyHypermeth 8.3598e-03 1.0000e+00 weaklyHypermeth 3.8058e-02 4.1820e-01 weaklyHypermeth 2.3348e-01 1.0000e+00 insignificant 0.0353255 6.7827e-01 insignificant 1.0000e+00 insignificant 0.825787 0.5047022 0.33201297 7 0.830688 0.608244 2.2244e-01 1.1250e-17 7.7228e-01 hypermethylated 1.4062e-15 1.000000 hypermethylated 6.8878e-09 0.93305782 hypermethylated 5.2983e-07 1.00000 hypermethylated 0.24604263 2.8926e-04 hypermethylated 1.7015e-02 hypermethylated 0.7706186 0.5041841 0.2821776 7 0.749881 0.552279 1.9760e-01 1.3339e-06 9.2228e-01 hypermethylated 6.6694e-04 1.0000e+00 hypermethylated 7.8289e-05 9.8474e-01 hypermethylated 3.9144e-02 1.0000e+00 hypermethylated 0.2107171 4.1199e-02 weaklyHypermeth 0.37797079 insignificant chr1 25768839 25769839 919 LDLRAP1 ENSG00000157978 0.880863 139 8 0.894397 147 7 0.892607 100 7 0.8698139 218 8 0.935147 45 7 0.9573121 140 8 0.7619048 37 6 0.879075 112 7 0.944444 40 3 0.978022 29 3 0.9110152 138 7 0.666667 4 0 0.977143 60 3 1.000000 2 0 0.951701 50 3 0.875000 7 0 0.000000 1 0 0.7263733 113 5 0.978478 171 8 0.9714892 152 8 0.926217 50 6 0.833333 7 0 0.892008 100 8 0.761508 44 7 0.7650154 183 5 0.9404987 210 8 0.835714 38 4 0.8710317 24 2 0.966305 149 7 0.943818 233 8 0.922521 223 8 0.823034 225 8 0.7503526 138 7 0.5700680 106 7 0.9581358 415 7 0.9296762 224 6 0.7827831 75 7 0.8321852 232 8 0.5750271 130 6 0.629980 140 7 0.8998964 100 5 0.5779461 135 7 0.699959 175 8 0.819273 0.831581 0.901573 0.9064608 0.8769841 0.958078 0.8958333 0.7775561 0.8902778 0.9384615 0.9097848 0.7030280 0.9360000 NA 0.9065476 0.86621728 NA 0.7378433 0.9784910 0.948389 0.852747 0.7917474 0.904672 0.7923810 0.800544 0.9156972 0.877500 0.6815972 0.994103 0.940852 0.927542 0.866198 0.7800922 0.8497619 0.9269720 0.8487654 0.7733106 0.7679514 0.6650492 0.809662 0.981643 0.7717045 0.897692 0 0.899648 0.913190 -0.01065668 7 0.927291 0.756690 0.17060069 0.9787756 0.74139734 insignificant 1 1.00000 insignificant 0.2030726 0.9825215 insignificant 1 1.00000 insignificant -0.02084427 0.6975070 lowCoverage 1 lowCoverage 0.898396 0.8487395 0.0580518 7 0.900025 0.848352 0.05167238 6.9241e-03 8.8643e-01 weaklyHypermeth 3.7226e-02 1.0000e+00 weaklyHypermeth 1.1635e-02 8.8775e-01 weaklyHypermeth 7.7051e-02 1.0000e+00 weaklyHypermeth 0.0487059 5.2938e-01 lowCoverage 1.0000e+00 lowCoverage 0.899471 0.5867647 0.2827205 6 0.911133 0.651475 0.25965837 2.7978e-17 9.9977e-01 hypermethylated 1.9985e-15 1.0000e+00 hypermethylated 8.3841e-09 9.9257e-01 hypermethylated 5.5894e-07 1.0000e+00 hypermethylated 0.1760109 4.6638e-02 lowCoverage 5.5521e-01 lowCoverage 0.914363 0.8487395 0.06878892 8 0.915449 0.848352 0.06709643 8.7076e-03 9.6510e-01 weaklyHypermeth 4.8255e-02 1.0000e+00 weaklyHypermeth 9.4433e-02 9.4107e-01 insignificant 5.1045e-01 1.0000e+00 insignificant 0.0695501 2.9377e-01 insignificant 1.0000e+00 insignificant 0.914420 0.5867647 0.32268988 7 0.924843 0.651475 2.7337e-01 4.9088e-17 9.9999e-01 hypermethylated 4.9088e-15 1.000000 hypermethylated 1.5455e-06 0.99659471 hypermethylated 8.1341e-05 1.00000 hypermethylated 0.19685518 2.7486e-02 weaklyHypermeth 4.2490e-01 insignificant 0.8487395 0.5883257 0.2593629 7 0.848352 0.663944 1.8441e-01 2.3161e-04 9.8224e-01 hypermethylated 2.1056e-02 1.0000e+00 hypermethylated 1.6198e-02 9.9772e-01 weaklyHypermeth 9.5283e-01 1.0000e+00 insignificant 0.1273050 1.6094e-01 insignificant 0.97542236 insignificant chr1 26754433 26755433 959 RPS6KA1 ENSG00000117676 0.950479 300 8 0.863382 219 9 0.853425 237 10 0.8404030 328 8 0.951105 196 10 0.9020190 370 11 0.8972871 274 10 0.875262 225 9 0.894617 289 9 0.816679 245 9 0.9447942 315 11 0.890943 223 9 0.819501 336 9 0.925549 88 5 0.906227 307 9 0.968601 164 9 0.900811 173 9 0.7333144 477 6 0.828457 231 10 0.9239239 285 11 0.853333 101 9 0.659952 205 5 0.900729 256 10 0.904969 146 7 0.9236853 121 6 0.7635083 294 10 0.865133 155 9 0.8026753 147 8 0.708449 205 8 0.862292 283 10 0.838189 215 10 0.829530 337 11 0.7032712 190 10 0.7870767 191 10 0.8582432 359 8 0.3133333 64 6 0.8016315 219 9 0.5847041 255 10 0.6512044 332 8 0.788500 409 11 0.7224552 268 7 0.5968372 300 5 0.767307 358 8 0.903091 0.893747 0.890046 0.9307760 0.9805848 0.886904 0.9343650 0.8892139 0.8898949 0.9447617 0.9348050 0.9037144 0.8091403 0.899814 0.9109212 0.98240875 0.903717 0.7602622 0.8748882 0.939532 0.848331 0.6895724 0.906406 0.9360156 0.864376 0.8370124 0.850301 0.8748882 0.654473 0.894442 0.823025 0.920790 0.7931862 0.7731655 0.8360426 0.2742037 0.8178670 0.5546351 0.6652372 0.824162 0.763700 0.7613319 0.853357 5 0.892025 0.847059 0.04319512 10 0.871207 0.721970 0.14923677 0.0039624 0.93718370 weaklyHypermeth 1 1.00000 insignificant 0.0029884 0.9739663 weaklyHypermeth 1 1.00000 insignificant 0.05830171 0.0411975 weaklyHypermeth 1 insignificant 0.892133 0.7245696 0.1683111 10 0.893245 0.701591 0.19165400 3.0058e-15 1.0000e+00 weaklyHypermeth 4.6243e-14 1.0000e+00 weaklyHypermeth 9.5373e-08 1.0000e+00 weaklyHypermeth 2.0292e-06 1.0000e+00 weaklyHypermeth 0.2096289 5.0644e-02 insignificant 3.4688e-01 insignificant 0.892133 0.8020396 0.1045697 6 0.893245 0.741087 0.15215754 1.9590e-13 9.9908e-01 weaklyHypermeth 1.0310e-11 1.0000e+00 weaklyHypermeth 3.3786e-08 9.9989e-01 weaklyHypermeth 1.8770e-06 1.0000e+00 weaklyHypermeth 0.1790783 5.1577e-03 weaklyHypermeth 1.1540e-01 insignificant 0.848091 0.7245696 0.12538039 10 0.853238 0.701591 0.15164691 2.2556e-08 9.9999e-01 weaklyHypermeth 2.5632e-07 1.0000e+00 weaklyHypermeth 9.3873e-05 9.9986e-01 weaklyHypermeth 1.3038e-03 1.0000e+00 weaklyHypermeth 0.1513272 1.2783e-01 insignificant 7.3729e-01 insignificant 0.848091 0.8020396 0.06332275 6 0.853238 0.741087 1.1215e-01 1.9960e-06 9.8894e-01 weaklyHypermeth 4.6418e-05 1.000000 weaklyHypermeth 1.4319e-04 0.99624091 weaklyHypermeth 3.4924e-03 1.00000 weaklyHypermeth 0.12077659 2.3569e-02 weaklyHypermeth 3.8015e-01 insignificant 0.7245696 0.8020396 -0.0431895 6 0.701591 0.741087 -3.9496e-02 7.8645e-01 1.0997e-01 insignificant 1.0000e+00 6.0095e-01 insignificant 7.9829e-01 2.7705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0305506 7.4330e-01 insignificant 1.00000000 insignificant chr1 26896277 26897277 972 ARID1A ENSG00000117713 0.022700 930 31 0.097910 860 39 0.077654 1426 39 0.0042000 1218 28 0.055218 789 33 0.0812738 1546 37 0.0410204 1060 38 0.061016 822 36 0.162503 1395 35 0.050038 1821 34 0.0034004 866 36 0.038445 1362 34 0.032404 1217 34 0.093458 788 22 0.050438 1415 34 0.049754 1302 34 0.070429 551 34 0.0046302 1188 36 0.064611 613 29 0.1028741 1024 29 0.036491 330 25 0.016754 913 33 0.071209 934 39 0.014322 533 35 0.0343676 731 30 0.0119192 1173 41 0.013401 802 35 0.0492094 732 33 0.053800 634 28 0.030981 1175 41 0.014904 1042 41 0.088929 1171 40 0.0120675 747 39 0.0854965 640 31 0.0689431 446 27 0.0288288 444 23 0.0320682 460 27 0.0843892 878 40 0.0039111 1114 25 0.010525 1034 30 0.0068549 1035 25 0.0010356 927 24 0.060576 1090 30 0.010136 0.036628 0.038115 0.0090083 0.0066283 0.026789 0.0128297 0.0184980 0.0130503 0.0056607 0.0058751 0.0050188 0.0099404 0.011052 0.0063895 0.00095425 0.018625 0.0119527 0.0081763 0.027017 0.014486 0.0029690 0.049548 0.0029822 0.012305 0.0288445 0.005805 0.0089455 0.029193 0.021220 0.034711 0.027390 0.0199019 0.0133125 0.0645015 0.0033798 0.0243114 0.0267850 0.0099604 0.014819 0.012754 0.0017152 0.019536 18 0.016492 0.021639 -0.00305673 37 0.088835 0.053180 0.03565459 0.1457519 0.98996608 insignificant 1 1.00000 insignificant 0.3345827 0.9998964 insignificant 1 1.00000 insignificant 0.02184164 0.0624509 insignificant 1 insignificant 0.016361 0.0221300 -0.0023585 33 0.079906 0.052262 0.02764424 3.0815e-01 9.2122e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3390e-01 9.9987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0062333 6.9650e-01 insignificant 1.0000e+00 insignificant 0.015449 0.0082692 0.0042749 25 0.058409 0.028482 0.02992709 2.5334e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2595e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0416185 1.5048e-02 weaklyHypermeth 2.5081e-01 insignificant 0.021647 0.0221361 0.00023307 33 0.054147 0.053212 0.00093491 9.8331e-01 9.9165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9860e-01 9.9993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0156083 3.2110e-01 insignificant 1.0000e+00 insignificant 0.021218 0.0082724 0.00929066 25 0.035985 0.029040 6.9450e-03 7.4096e-01 9.9999e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3123e-01 0.99999987 insignificant 1.0000e+00 1.00000 insignificant 0.01977688 1.7617e-01 insignificant 1.0000e+00 insignificant 0.0206013 0.0082692 0.0082502 24 0.036014 0.028482 7.5320e-03 9.9957e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9999e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0353852 6.7412e-02 insignificant 0.55153998 insignificant chr1 26896615 26897615 973 ARID1A ENSG00000117713 0.060684 158 11 0.024535 169 8 0.074640 271 9 0.0077686 159 11 0.094494 162 8 0.0519153 295 10 0.0063611 284 11 0.073931 260 11 0.073413 448 11 0.137241 425 9 0.0047619 219 11 0.108030 293 9 0.013118 228 9 0.088370 173 9 0.023665 319 9 0.078205 243 9 0.100382 113 9 0.0020408 183 9 0.149534 121 6 0.1749008 260 9 0.020833 69 6 0.035437 187 9 0.127325 221 9 0.000000 187 11 0.0934829 189 10 0.0039526 249 11 0.037037 239 10 0.0796221 233 9 0.081255 118 9 0.067841 257 11 0.014381 274 11 0.056085 237 12 0.0138809 228 11 0.0121212 118 8 0.1659259 77 5 0.0833333 59 5 0.0664994 176 10 0.0543956 229 11 0.0097403 175 8 0.017735 158 9 0.0109091 132 8 0.0000000 98 7 0.108712 137 9 0.016343 0.024115 0.010282 0.0191759 0.0251450 0.014119 0.0095636 0.0174856 0.0007869 0.0095715 0.0079320 0.0178338 0.0216602 0.014265 0.0113051 0.00354108 0.035448 0.0060704 0.0209693 0.016991 0.015109 0.0090818 0.029249 0.0000000 0.029863 0.0092376 0.006610 0.0074549 0.041660 0.014422 0.032578 0.028958 0.0232385 0.0230345 0.0774315 0.0000000 0.0275422 0.0446139 0.0289724 0.019259 0.019037 0.0000000 0.029143 5 0.017775 0.021164 -0.00422063 11 0.113299 0.097837 0.01546271 0.8009162 0.94103288 insignificant 1 1.00000 insignificant 0.9223897 0.9971567 insignificant 1 1.00000 insignificant 0.01596194 0.3317756 insignificant 1 insignificant 0.017771 0.0338219 -0.0121629 10 0.107005 0.071864 0.03514052 4.2155e-01 5.6591e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7082e-01 9.2326e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0013735 9.5891e-01 insignificant 1.0000e+00 insignificant 0.014951 0.0185714 -0.0055306 8 0.061739 0.023439 0.03830009 8.8134e-01 8.3344e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5083e-01 9.9736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0379802 1.4433e-01 insignificant 1.0000e+00 insignificant 0.021164 0.0338600 -0.00822459 10 0.097837 0.076092 0.02174490 8.6012e-01 4.1085e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5652e-01 8.7574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0145885 5.8799e-01 insignificant 1.0000e+00 insignificant 0.020425 0.0186246 -0.00175298 8 0.047373 0.025113 2.2260e-02 9.7401e-01 9.7414e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7208e-01 0.99588125 insignificant 1.0000e+00 1.00000 insignificant 0.02201822 3.7227e-01 insignificant 1.0000e+00 insignificant 0.0286369 0.0185714 0.0060835 7 0.023380 0.023439 -5.9018e-05 9.7167e-01 9.7875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7920e-01 9.9350e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0366067 2.6200e-01 insignificant 1.00000000 insignificant chr1 26897017 26898017 974 ARID1A ENSG00000117713 0.015385 73 5 0.033977 99 5 0.145199 173 5 0.0090909 60 5 0.156463 100 5 0.0080645 173 5 0.0137823 149 5 0.158424 137 5 0.146825 243 5 0.151231 227 5 0.0000000 100 5 0.151901 166 5 0.018860 137 5 0.164116 113 5 0.000000 150 5 0.145238 152 5 0.193519 57 5 0.0057143 84 3 0.150000 46 2 0.0065574 153 5 0.055556 36 4 0.018382 89 5 0.013636 119 3 0.000000 82 5 0.0083333 62 5 0.0086957 117 5 0.000000 142 5 0.0070175 140 5 0.174118 62 5 0.155065 137 5 0.037391 160 5 0.014815 146 5 0.0305332 136 5 0.0444444 34 2 0.2488889 65 4 0.1428571 21 1 0.1300207 106 6 0.0523077 102 5 0.0272727 51 2 0.033333 29 3 0.0000000 33 2 0.0000000 33 3 0.020833 36 3 0.037707 0.028188 0.008036 0.0222816 0.0340492 0.023719 0.0220651 0.0403426 0.0018155 0.0220833 0.0000000 0.0254596 0.0362487 0.032913 0.0000000 0.00816993 0.057916 0.0140056 0.0245098 0.016072 0.034858 0.0209535 0.033422 0.0000000 0.020425 0.0213129 0.000000 0.0171999 0.096117 0.033274 0.075163 0.036311 0.0421777 0.0531450 0.1786492 0.0000000 0.0213129 0.1029328 0.0668449 0.017429 0.000000 0.0000000 0.030637 2 0.020448 0.025542 -0.00854524 5 0.150684 0.153637 -0.00295323 0.8918201 0.64630659 insignificant 1 1.00000 insignificant 0.9333660 0.9246655 insignificant 1 1.00000 insignificant 0.04263317 0.0888249 lowCoverage 1 lowCoverage 0.020448 0.0560345 -0.0305684 5 0.150684 0.159968 -0.00928369 3.8025e-01 3.1020e-05 weaklyHypometh 1.0000e+00 5.1700e-03 weaklyHypometh 7.9327e-01 8.8186e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0244581 5.3822e-01 lowCoverage 1.0000e+00 lowCoverage 0.015222 0.0274725 -0.0091005 2 0.010957 0.019085 -0.00812790 6.2179e-01 2.6015e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0628e-01 9.3991e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0674294 1.1992e-03 lowCoverage 4.2830e-02 lowCoverage 0.025542 0.0560345 -0.02307141 5 0.153637 0.159968 -0.00633046 9.3763e-01 1.2969e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5876e-01 1.7026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0670912 1.1825e-01 lowCoverage 6.9559e-01 lowCoverage 0.024087 0.0274725 0.00052486 2 0.015092 0.019085 -3.9934e-03 8.6769e-01 8.5717e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.5138e-01 0.99410901 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.02479625 2.0502e-01 lowCoverage 1.0000e+00 lowCoverage 0.0464602 0.0274725 0.0366047 2 0.035383 0.019085 1.6298e-02 2.0501e-01 8.8829e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.6841e-01 9.6010e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0918875 4.2131e-02 lowCoverage 0.37997720 lowCoverage chr1 27055478 27056478 998 ZDHHC18 ENSG00000204160 0.665864 482 11 0.691567 343 11 0.659425 358 11 0.7049889 541 11 0.639035 204 10 0.6746046 622 11 0.6526005 247 9 0.732797 300 11 0.633271 356 11 0.694024 272 11 0.6685251 465 11 0.752432 159 7 0.612017 458 11 0.459475 127 8 0.591354 291 11 0.480320 103 5 0.782309 145 8 0.6309356 578 10 0.804457 304 10 0.6507470 595 11 0.595967 210 11 0.546000 344 11 0.590861 331 11 0.612620 224 11 0.7733196 238 10 0.6832956 396 11 0.557729 287 10 0.5860029 201 8 0.655148 324 11 0.653326 404 11 0.681694 440 11 0.801122 680 11 0.7206088 344 11 0.6497152 298 11 0.7041766 377 9 0.6451499 164 9 0.6578952 250 11 0.6447109 454 11 0.6483715 530 11 0.637813 705 11 0.5659622 466 10 0.6870558 511 10 0.648071 653 11 0.700739 0.543337 0.631661 0.6375207 0.5245774 0.682170 0.6879292 0.6231041 0.6580796 0.6114673 0.6782635 0.7156317 0.5485027 0.515746 0.5522633 0.50219377 0.760057 0.6356564 0.7005843 0.546680 0.776042 0.4958024 0.602889 0.6036806 0.680793 0.5788388 0.550613 0.7130453 0.606521 0.515256 0.549754 0.747715 0.5848104 0.6256367 0.6384767 0.5134106 0.6193197 0.4289442 0.5336492 0.508047 0.449757 0.5684518 0.524239 8 0.647338 0.644172 0.00370544 11 0.583399 0.606408 -0.02300893 0.6646100 0.30505677 insignificant 1 1.00000 insignificant 0.5276296 0.5865413 insignificant 1 1.00000 insignificant 0.01428038 0.6375891 insignificant 1 insignificant 0.647431 0.5899204 0.0657184 11 0.622292 0.580414 0.04187778 6.4964e-02 4.9588e-03 inconclusive 3.0935e-01 3.3058e-01 insignificant 5.1349e-01 1.0536e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0113387 6.3116e-01 insignificant 1.0000e+00 insignificant 0.648153 0.5465969 0.0973790 11 0.687587 0.664001 0.02358630 8.0915e-05 9.2245e-01 weaklyHypermeth 1.2448e-03 1.0000e+00 weaklyHypermeth 2.3855e-04 9.8791e-01 weaklyHypermeth 5.0008e-03 1.0000e+00 weaklyHypermeth 0.0215828 4.4463e-01 insignificant 1.0000e+00 insignificant 0.643926 0.5903551 0.05683077 11 0.590783 0.606638 -0.01585565 2.7776e-01 4.3517e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 8.0206e-01 1.7012e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0256191 3.5524e-01 insignificant 1.0000e+00 insignificant 0.648575 0.5465969 0.08980447 11 0.727483 0.664001 6.3482e-02 1.2024e-04 9.9972e-01 weaklyHypermeth 2.0379e-03 1.000000 weaklyHypermeth 3.1104e-03 0.99942521 weaklyHypermeth 5.1903e-02 1.00000 weaklyHypermeth 0.00730238 8.1427e-01 insignificant 1.0000e+00 insignificant 0.5913692 0.5465969 0.0263106 11 0.669962 0.664001 5.9613e-03 2.5692e-03 9.4928e-01 weaklyHypermeth 1.4273e-01 1.0000e+00 insignificant 8.8537e-03 9.9448e-01 weaklyHypermeth 6.3241e-01 1.0000e+00 insignificant 0.0329214 2.1011e-01 insignificant 1.00000000 insignificant chr1 27601890 27602890 1021 GPR3 ENSG00000181773 0.69183 104 4 0.81728 75 4 0.55952 47 4 0.725163 75 4 0.745455 41 3 0.59603 94 5 0.747026 51 5 0.90317 58 5 0.375000 5 0 0.666667 11 0 0.507880 63 5 0.375000 7 0 0.625000 7 0 0.850000 16 0 0.916667 10 0 0.833333 22 3 NA 0 0 0.451348 136 4 0.765374 58 5 0.909341 62 4 0.760684 45 4 0.412121 41 3 0.74028 36 5 0.865000 40 5 0.676784 189 5 0.67959 74 4 0.594444 37 4 0.333333 4 0 0.957143 53 4 0.711382 53 4 0.601781 64 5 0.834827 69 4 0.0095238 90 5 0.087879 124 5 0.142857 154 4 0.0000000 183 5 0.351667 62 5 0.149660 194 5 0.675817 64 4 0.748737 49 4 0.560455 46 5 0.546787 113 3 0.659160 65 4 0.843530 0.711485 0.472222 0.847495 0.903030 0.811177 0.715152 0.962963 0.166667 0.444444 0.658069 0.500000 0.833333 0.916667 0.888889 0.833333 NA 0.592483 0.739899 0.879121 0.897436 0.575758 0.791667 0.875000 0.803899 0.903030 0.966667 0.333333 0.928571 0.790476 0.822222 0.875039 0.015873 0.0909091 0.0000000 0.000000 0.041667 0.015873 0.793028 0.861111 0.575758 0.562383 0.717647 0 0.749728 0.781250 -0.04881246 4 0.58477 0.559635 0.0251326 0.4270710 1.0343e-01 lowCoverage 1 1.000000 lowCoverage 0.881524 0.24302470 lowCoverage 1 1.00000 lowCoverage 0.0068125 0.917591 lowCoverage 1 lowCoverage 0.751904 0.023602 0.7253350 4 0.70977 0.105704 0.6040633 2.1833e-38 9.9985e-01 lowCoverage 2.7291e-36 1.0000e+00 lowCoverage 1.6463e-10 0.9987195 lowCoverage 1.6463e-08 1 lowCoverage 0.56382841 2.7568e-06 lowCoverage 1.1487e-04 lowCoverage 0.754425 0.670623 0.0764021 4 0.61302 0.522653 0.090370 4.3860e-02 0.93418881 lowCoverage 6.2657e-01 1.00000 lowCoverage 5.1098e-01 0.9223921 lowCoverage 1.0000e+00 1 lowCoverage 0.0492350 3.8405e-01 lowCoverage 1.0000e+00 lowCoverage 0.782361 0.023632 0.7588530 5 0.639583 0.120805 0.5187780 5.9003e-35 1.0000e+00 hypermethylated 9.8338e-33 1.0000000 hypermethylated 3.1858e-09 0.999991 hypermethylated 2.6548e-07 1 hypermethylated 0.5570159 3.1395e-06 lowCoverage 1.5697e-04 lowCoverage 0.783357 0.672619 0.1314261 4 0.735416 0.627183 0.10823241 5.3474e-03 0.99473548 lowCoverage 9.2196e-02 1.00000 lowCoverage 7.4802e-02 0.988473 lowCoverage 9.8423e-01 1 lowCoverage 0.0424225 5.1735e-01 lowCoverage 1.0000000 lowCoverage 0.020126 0.672619 -0.6514755 4 0.019126 0.627183 -0.6080567 1.0000e+00 4.7032e-20 lowCoverage 1.0000e+00 1.5677e-17 lowCoverage 1.0000e+00 4.9529e-08 lowCoverage 1.0000000 9.9059e-06 lowCoverage -0.514593 2.9479e-05 lowCoverage 0.00327543 lowCoverage chr1 27712665 27713665 1048 WASF2 ENSG00000158195 0.86511 327 7 0.74282 104 7 0.79091 85 7 0.770073 283 7 0.607143 53 4 0.91265 239 7 0.812585 53 5 0.79358 79 5 0.859949 51 4 0.723959 90 4 0.916405 197 7 0.848214 38 2 0.579745 86 5 0.736313 70 4 0.678237 90 4 0.700000 18 2 0.333333 7 0 0.578299 434 7 0.657884 210 7 0.856735 178 7 0.777273 38 4 0.627652 48 2 0.83962 103 7 0.933333 43 5 0.782748 120 5 0.83033 227 8 0.786531 82 5 0.741071 29 4 0.650764 162 5 0.789601 181 7 0.783578 203 8 0.830842 226 7 0.1445198 132 5 0.222740 274 7 0.322115 221 6 0.6606449 160 6 0.252810 126 7 0.355718 416 8 0.657265 207 7 0.751721 242 7 0.773880 235 5 0.742523 346 7 0.652911 185 7 0.763139 0.591324 0.722741 0.778719 0.631678 0.808953 0.693176 0.761325 0.727283 0.668023 0.846142 0.588918 0.514387 0.764284 0.624953 0.697939 0.481341 0.551901 0.673525 0.701578 0.732385 0.619760 0.811522 0.973826 0.725722 0.774849 0.681981 0.636230 0.716555 0.749537 0.707929 0.775500 0.154541 0.2296488 0.2897412 0.392546 0.307165 0.273719 0.649778 0.599305 0.597751 0.436235 0.536571 2 0.755589 0.766758 -0.02281913 6 0.65146 0.741328 -0.0898673 0.2410838 8.6079e-01 insignificant 1 1.000000 insignificant 0.238923 0.40899596 insignificant 1 1.00000 insignificant -0.0429149 0.283775 insignificant 1 insignificant 0.755680 0.304217 0.4382831 7 0.68315 0.352181 0.3309643 3.8133e-31 1.0000e+00 hypermethylated 3.1777e-29 1.0000e+00 hypermethylated 6.7004e-11 1.0000000 hypermethylated 8.3755e-09 1 hypermethylated 0.41177238 1.3551e-03 weaklyHypermeth 2.7101e-02 weaklyHypermeth 0.755299 0.618107 0.1239929 7 0.64678 0.624731 0.022051 4.0135e-03 0.98881025 weaklyHypermeth 6.8025e-02 1.00000 weaklyHypermeth 1.1056e-01 0.9591229 insignificant 1.0000e+00 1 insignificant 0.0225373 5.8332e-01 insignificant 1.0000e+00 insignificant 0.766758 0.303693 0.4732213 7 0.741328 0.287400 0.4539280 9.5582e-28 1.0000e+00 hypermethylated 8.6893e-26 1.0000000 hypermethylated 4.5422e-10 1.000000 hypermethylated 5.6777e-08 1 hypermethylated 0.4546873 1.0228e-03 weaklyHypermeth 2.2730e-02 weaklyHypermeth 0.766758 0.618616 0.1594354 6 0.741328 0.687204 0.05412342 2.0551e-03 0.66446485 weaklyHypermeth 4.2814e-02 1.00000 weaklyHypermeth 1.9886e-02 0.600819 weaklyHypermeth 3.2075e-01 1 insignificant 0.0654522 8.5078e-02 insignificant 1.0000000 insignificant 0.303693 0.618616 -0.3193409 7 0.287400 0.687204 -0.3998046 1.0000e+00 8.6572e-15 hypomethylated 1.0000e+00 1.2367e-12 hypomethylated 1.0000e+00 2.2779e-07 hypomethylated 1.0000000 3.2542e-05 hypomethylated -0.389235 2.2628e-03 weaklyHypometh 0.05896808 weaklyHypometh chr1 27718027 27719027 1049 WASF2 ENSG00000158195 0.74833 53 5 0.52473 204 5 0.63454 123 5 0.541270 37 2 0.579113 73 5 0.59196 87 4 0.473960 108 5 0.52440 154 5 0.505991 109 5 0.597298 154 5 0.780923 193 5 0.629300 58 5 0.378561 240 5 0.854497 24 2 0.414566 131 5 0.270370 46 5 0.054861 105 4 0.806667 24 2 0.607062 205 5 0.451389 65 5 0.409050 77 5 0.186813 45 2 0.55633 77 5 0.558152 64 4 0.522222 19 1 0.55680 209 5 0.404262 81 4 0.550000 41 3 0.516807 157 5 0.566587 296 5 0.370493 241 5 0.838446 94 5 0.2081603 224 5 0.357265 150 5 0.501754 76 4 0.0000000 17 1 0.484737 76 5 0.077966 281 5 0.132500 51 3 0.094737 69 5 0.333333 12 1 0.075000 33 4 0.050000 31 2 0.809211 0.569454 0.554016 0.571429 0.528592 0.782185 0.491855 0.569129 0.567618 0.590858 0.761293 0.551549 0.305826 0.732761 0.466416 0.331930 0.044342 0.600000 0.594003 0.588596 0.704762 0.173279 0.698309 0.602918 0.596262 0.647184 0.609774 0.863158 0.718485 0.508371 0.434342 0.808310 0.280269 0.3829907 0.2031141 0.040659 0.694422 0.106997 0.248684 0.169529 0.357895 0.107368 0.089474 2 0.483356 0.533286 -0.04139579 5 0.51182 0.422520 0.0892983 0.1236788 4.1302e-01 insignificant 1 1.000000 insignificant 0.459824 0.26492559 insignificant 1 1.00000 insignificant 0.0454933 0.463749 lowCoverage 1 lowCoverage 0.483356 0.297330 0.1887063 5 0.51182 0.199028 0.3127905 2.1567e-08 9.9991e-01 weaklyHypermeth 3.4349e-07 1.0000e+00 weaklyHypermeth 3.4808e-03 0.9997685 weaklyHypermeth 4.0951e-02 1 weaklyHypermeth 0.27684282 2.1197e-02 lowCoverage 2.3552e-01 lowCoverage 0.483028 0.147959 0.4032992 2 0.50702 0.087532 0.419489 3.7365e-16 1.00000000 lowCoverage 1.2455e-13 1.00000 lowCoverage 6.2663e-09 1.0000000 lowCoverage 1.5666e-06 1 lowCoverage 0.4113759 8.6145e-05 lowCoverage 1.2306e-02 lowCoverage 0.533286 0.297330 0.2317763 5 0.422520 0.199028 0.2234922 3.8397e-05 1.0000e+00 hypermethylated 4.6261e-04 1.0000000 hypermethylated 2.6695e-03 0.999971 weaklyHypermeth 3.1780e-02 1 weaklyHypermeth 0.2313495 4.4524e-02 lowCoverage 4.4973e-01 lowCoverage 0.537681 0.147959 0.4224551 2 0.531528 0.087532 0.44399539 8.5657e-17 1.00000000 lowCoverage 2.8552e-14 1.00000 lowCoverage 1.0038e-07 1.000000 lowCoverage 1.7079e-05 1 lowCoverage 0.3658826 2.6902e-04 lowCoverage 0.0224182 lowCoverage 0.299511 0.147959 0.1233248 2 0.278639 0.087532 0.1911063 1.3885e-03 7.7342e-01 lowCoverage 1.2622e-01 1.0000e+00 lowCoverage 1.7022e-04 7.9995e-01 lowCoverage 0.0418208 1.0000e+00 lowCoverage 0.134533 2.1489e-01 lowCoverage 1.00000000 lowCoverage chr1 27718323 27719323 1050 WASF2 ENSG00000158195 0.79028 54 5 0.53252 218 6 0.65818 128 6 0.559184 43 3 0.639239 77 5 0.65025 92 5 0.561634 114 6 0.57034 159 6 0.505991 109 5 0.664415 155 5 0.803547 205 6 0.691083 59 5 0.378561 240 5 0.854497 24 2 0.414566 131 5 0.270370 46 5 0.054861 105 4 0.806667 24 2 0.607062 205 5 0.529762 66 5 0.474711 79 5 0.186813 45 2 0.61971 79 5 0.621273 72 5 0.561905 24 2 0.60289 215 6 0.478729 84 4 0.550000 41 3 0.585835 158 5 0.628503 302 6 0.442078 251 6 0.832954 99 6 0.3212803 236 6 0.464387 152 5 0.501754 76 4 0.2500000 18 1 0.549145 84 6 0.231638 292 6 0.277083 53 3 0.245614 70 5 0.500000 14 1 0.260000 42 5 0.166667 43 3 0.809211 0.569454 0.554016 0.571429 0.528592 0.782185 0.491855 0.569129 0.567618 0.590858 0.761293 0.551549 0.305826 0.732761 0.466416 0.331930 0.044342 0.600000 0.594003 0.588596 0.704762 0.173279 0.698309 0.602918 0.596262 0.647184 0.609774 0.863158 0.718485 0.508371 0.434342 0.808310 0.280269 0.3829907 0.2031141 0.040659 0.694422 0.106997 0.248684 0.169529 0.357895 0.107368 0.089474 2 0.492458 0.545329 -0.04236311 5 0.55030 0.481684 0.0686159 0.1999215 2.8301e-01 insignificant 1 1.000000 insignificant 0.540448 0.28534880 insignificant 1 1.00000 insignificant 0.0283667 0.648477 lowCoverage 1 lowCoverage 0.492458 0.325175 0.1787192 5 0.55030 0.299149 0.2511507 1.0094e-07 8.7539e-01 weaklyHypermeth 1.4420e-06 1.0000e+00 weaklyHypermeth 8.5535e-03 0.9470886 weaklyHypermeth 9.0994e-02 1 weaklyHypermeth 0.19078234 1.9233e-02 lowCoverage 2.2363e-01 lowCoverage 0.492191 0.234234 0.3694971 2 0.55913 0.220380 0.338750 2.8667e-15 0.99640045 lowCoverage 7.1667e-13 1.00000 lowCoverage 3.1359e-08 0.9963840 lowCoverage 4.4799e-06 1 lowCoverage 0.2872771 2.5021e-03 lowCoverage 1.1324e-01 lowCoverage 0.545329 0.325175 0.2201586 5 0.481684 0.299149 0.1825348 1.2910e-04 9.2029e-01 hypermethylated 1.4187e-03 1.0000000 hypermethylated 6.6835e-03 0.971163 weaklyHypermeth 7.1865e-02 1 weaklyHypermeth 0.1624156 4.2162e-02 lowCoverage 4.3466e-01 lowCoverage 0.549720 0.234234 0.3843776 2 0.592245 0.220380 0.37186582 4.0519e-16 0.99997167 lowCoverage 1.0130e-13 1.00000 lowCoverage 4.0769e-07 0.999117 lowCoverage 5.8241e-05 1 lowCoverage 0.2589104 5.1677e-03 lowCoverage 0.2460796 lowCoverage 0.327465 0.234234 0.1223948 3 0.398866 0.220380 0.1784861 5.2721e-04 8.8382e-01 lowCoverage 5.8579e-02 1.0000e+00 lowCoverage 1.9875e-04 8.9321e-01 lowCoverage 0.0418208 1.0000e+00 lowCoverage 0.096495 2.5213e-01 lowCoverage 1.00000000 lowCoverage chr1 27718513 27719513 1051 WASF2 ENSG00000158195 0.79028 54 5 0.45644 219 6 0.65818 128 6 0.559184 43 3 0.559334 78 5 0.65025 92 5 0.561634 114 6 0.57034 159 6 0.588326 110 5 0.664415 155 5 0.831611 206 6 0.691083 59 5 0.378561 240 5 0.854497 24 2 0.414566 131 5 0.270370 46 5 0.054861 105 4 0.806667 24 2 0.607062 205 5 0.529762 66 5 0.474711 79 5 0.186813 45 2 0.54224 80 5 0.543614 73 5 0.491667 25 2 0.60289 215 6 0.425537 85 4 0.427778 44 3 0.585835 158 5 0.628503 302 6 0.474162 254 6 0.832954 99 6 0.3212803 236 6 0.540903 153 5 0.501754 76 4 0.2500000 18 1 0.525166 93 7 0.231638 292 6 0.237500 54 3 0.210526 71 5 0.500000 14 1 0.260000 42 5 0.166667 43 3 0.809211 0.569454 0.554016 0.571429 0.528592 0.782185 0.491855 0.569129 0.567618 0.590858 0.761293 0.551549 0.305826 0.732761 0.466416 0.331930 0.044342 0.600000 0.594003 0.588596 0.704762 0.173279 0.698309 0.602918 0.596262 0.647184 0.609774 0.863158 0.718485 0.508371 0.434342 0.808310 0.280269 0.3829907 0.2031141 0.040659 0.694422 0.106997 0.248684 0.169529 0.357895 0.107368 0.089474 2 0.492471 0.543703 -0.04183066 5 0.54471 0.455941 0.0887697 0.1739153 3.7729e-01 insignificant 1 1.000000 insignificant 0.420475 0.39913324 insignificant 1 1.00000 insignificant 0.0568120 0.367070 lowCoverage 1 lowCoverage 0.492471 0.325260 0.1786978 5 0.54471 0.302947 0.2417636 2.1170e-07 8.9969e-01 weaklyHypermeth 2.9402e-06 1.0000e+00 weaklyHypermeth 1.4945e-02 0.9612266 weaklyHypermeth 1.3967e-01 1 insignificant 0.17974723 3.1224e-02 lowCoverage 3.2525e-01 lowCoverage 0.492205 0.232143 0.3701120 2 0.55068 0.188897 0.361786 4.5935e-15 0.99864346 lowCoverage 9.1870e-13 1.00000 lowCoverage 4.3854e-08 0.9989996 lowCoverage 5.4818e-06 1 lowCoverage 0.2999323 2.5431e-03 lowCoverage 1.1324e-01 lowCoverage 0.542955 0.326037 0.2166763 5 0.410347 0.372653 0.0376945 7.3300e-04 9.5693e-01 hypermethylated 7.6355e-03 1.0000000 hypermethylated 2.9441e-02 0.886549 weaklyHypermeth 2.6524e-01 1 insignificant 0.1229352 1.2207e-01 lowCoverage 1.0000e+00 lowCoverage 0.548050 0.232143 0.3831448 2 0.543353 0.188897 0.35445642 8.3055e-16 0.99998117 lowCoverage 1.6611e-13 1.00000 lowCoverage 8.7195e-07 0.999651 lowCoverage 9.6884e-05 1 lowCoverage 0.2431203 9.1306e-03 lowCoverage 0.3804405 lowCoverage 0.327526 0.232143 0.1242782 3 0.389504 0.188897 0.2006071 1.6410e-03 9.4956e-01 lowCoverage 1.3675e-01 1.0000e+00 lowCoverage 2.4008e-04 9.5358e-01 lowCoverage 0.0418208 1.0000e+00 lowCoverage 0.120185 1.8033e-01 lowCoverage 1.00000000 lowCoverage chr1 27720141 27721141 1053 WASF2 ENSG00000158195 0.85000 34 4 0.80649 72 5 0.74078 46 5 0.800000 16 1 0.570202 36 3 0.86832 94 5 0.777143 37 3 0.79268 52 4 0.722424 35 3 0.760317 47 5 0.752239 96 5 0.785592 58 3 0.722549 105 5 NA 0 0 0.868333 39 3 0.647619 38 5 0.591795 31 3 0.142857 23 2 0.744662 62 5 0.741228 57 5 0.837176 70 5 0.320635 28 3 0.74002 45 3 0.609924 53 3 0.583333 18 1 0.76741 118 5 0.766944 48 5 0.626948 34 3 0.737308 54 4 0.870290 89 5 0.746858 133 5 0.776689 104 5 0.0769935 111 5 0.075294 93 5 0.000000 37 3 0.4800000 29 3 0.074405 32 2 0.266869 121 5 0.496667 33 5 0.671486 86 5 0.566667 12 1 0.497619 44 3 0.424837 39 3 0.809028 0.757576 0.713240 0.791667 0.533705 0.890099 0.766071 0.773420 0.780387 0.743937 0.747728 0.760056 0.677696 NA 0.825231 0.574735 0.585114 0.125000 0.722789 0.754264 0.872353 0.393078 0.733072 0.570028 0.658565 0.733729 0.811555 0.630930 0.679621 0.815117 0.743723 0.790241 0.057879 0.0408497 0.0336530 0.402381 0.121025 0.178655 0.489583 0.629609 0.608796 0.453208 0.394517 1 0.746421 0.750630 0.00569590 5 0.75264 0.746168 0.0064761 0.2087915 3.8629e-01 insignificant 1 1.000000 insignificant 0.044383 0.50769329 weaklyHypermeth 1 1.00000 insignificant 0.0216474 0.704338 lowCoverage 1 lowCoverage 0.746421 0.134752 0.6005452 5 0.75264 0.167675 0.5849691 1.4939e-29 1.0000e+00 hypermethylated 9.3370e-28 1.0000e+00 hypermethylated 1.6916e-09 1.0000000 hypermethylated 1.1278e-07 1 hypermethylated 0.55801521 1.5980e-04 lowCoverage 4.9937e-03 lowCoverage 0.746421 0.518692 0.2200670 3 0.75264 0.561545 0.191099 3.6284e-06 0.99951868 lowCoverage 1.5118e-04 1.00000 lowCoverage 7.3428e-04 0.9946207 lowCoverage 2.4476e-02 1 lowCoverage 0.1888204 5.8139e-03 lowCoverage 2.0048e-01 lowCoverage 0.750630 0.134752 0.6038762 5 0.746168 0.167675 0.5784930 2.4730e-23 1.0000e+00 hypermethylated 1.9023e-21 1.0000000 hypermethylated 3.0279e-08 0.999999 hypermethylated 1.7811e-06 1 hypermethylated 0.5363678 1.7267e-04 lowCoverage 5.2323e-03 lowCoverage 0.750630 0.518692 0.2489311 3 0.746168 0.561545 0.18462264 1.6933e-06 0.96793544 lowCoverage 8.2891e-05 1.00000 lowCoverage 1.5363e-03 0.953757 lowCoverage 4.3894e-02 1 lowCoverage 0.1671730 1.5755e-02 lowCoverage 0.5144404 lowCoverage 0.134752 0.518692 -0.3645044 3 0.167675 0.561545 -0.3938704 1.0000e+00 3.8138e-08 lowCoverage 1.0000e+00 1.4668e-06 lowCoverage 9.9994e-01 4.8266e-04 lowCoverage 1.0000000 1.5570e-02 lowCoverage -0.369195 2.5258e-03 lowCoverage 0.06314463 lowCoverage chr1 27754491 27755491 1066 WASF2 ENSG00000158195 0.69792 132 7 0.37456 165 8 0.63928 203 8 0.710320 146 4 0.638310 121 6 0.60836 172 7 0.561872 172 8 0.46801 177 8 0.479312 141 8 0.592708 150 7 0.679270 322 8 0.462113 110 5 0.253499 237 8 0.531930 87 4 0.507080 171 8 0.547279 81 5 0.488095 78 4 0.450903 173 7 0.462305 292 8 0.551575 131 7 0.669329 81 7 0.430239 80 4 0.67528 108 6 0.575932 99 8 0.542973 66 4 0.61124 249 8 0.492704 159 7 0.709259 51 5 0.622000 197 8 0.563088 270 8 0.646699 233 8 0.549229 183 8 0.0879985 248 8 0.110724 211 8 0.000000 99 6 0.0083333 48 3 0.123890 229 8 0.072063 261 8 0.650787 174 7 0.475595 165 8 0.794958 109 4 0.383770 156 5 0.699273 130 6 0.616248 0.316449 0.555947 0.612263 0.536449 0.514848 0.451774 0.487499 0.343721 0.492281 0.643474 0.392147 0.287706 0.500246 0.451421 0.417806 0.460759 0.528542 0.483575 0.493885 0.483447 0.489832 0.604252 0.490692 0.513848 0.524268 0.399288 0.442974 0.539815 0.477958 0.601490 0.527447 0.021401 0.0801669 0.0047480 0.030351 0.065561 0.070339 0.489040 0.477241 0.636653 0.280325 0.569907 2 0.536032 0.606982 -0.03882936 8 0.52704 0.613342 -0.0862988 0.9782210 1.7773e-02 weaklyHypometh 1 0.792390 insignificant 0.982868 0.07203024 insignificant 1 1.00000 insignificant -0.0554299 0.118403 insignificant 1 insignificant 0.536032 0.085766 0.4791245 8 0.52704 0.077163 0.4498806 4.2521e-35 1.0000e+00 hypermethylated 4.2521e-33 1.0000e+00 hypermethylated 1.9077e-16 1.0000000 hypermethylated 3.8155e-14 1 hypermethylated 0.46806674 1.3729e-11 hypermethylated 1.9613e-09 hypermethylated 0.536032 0.529973 0.0127140 6 0.52704 0.617748 -0.090705 5.7418e-01 0.09853240 insignificant 1.0000e+00 1.00000 insignificant 9.2353e-01 0.1547737 insignificant 1.0000e+00 1 insignificant -0.0656417 4.4535e-01 insignificant 1.0000e+00 insignificant 0.606982 0.085766 0.5255571 8 0.613342 0.077163 0.5361794 2.7473e-34 1.0000e+00 hypermethylated 3.4341e-32 1.0000000 hypermethylated 1.0413e-13 1.000000 hypermethylated 2.0826e-11 1 hypermethylated 0.5234967 6.6940e-11 hypermethylated 1.6735e-08 hypermethylated 0.606982 0.529973 0.0460092 6 0.613342 0.617748 -0.00440588 1.9990e-01 0.89782875 insignificant 1.0000e+00 1.00000 insignificant 6.5111e-01 0.673850 insignificant 1.0000e+00 1 insignificant -0.0102118 9.0192e-01 insignificant 1.0000000 insignificant 0.085766 0.529973 -0.4852487 6 0.077163 0.617748 -0.5405853 1.0000e+00 2.5079e-16 hypomethylated 1.0000e+00 5.0158e-14 hypomethylated 1.0000e+00 1.4478e-08 hypomethylated 1.0000000 4.8258e-06 hypomethylated -0.533708 1.3629e-03 weaklyHypometh 0.04157510 weaklyHypometh chr1 27754778 27755778 1067 WASF2 ENSG00000158195 0.69792 132 7 0.37456 165 8 0.63928 203 8 0.710320 146 4 0.638310 121 6 0.60836 172 7 0.561872 172 8 0.46801 177 8 0.479312 141 8 0.592708 150 7 0.679270 322 8 0.462113 110 5 0.253499 237 8 0.531930 87 4 0.507080 171 8 0.547279 81 5 0.488095 78 4 0.450903 173 7 0.462305 292 8 0.551575 131 7 0.669329 81 7 0.430239 80 4 0.67528 108 6 0.575932 99 8 0.542973 66 4 0.61124 249 8 0.492704 159 7 0.709259 51 5 0.622000 197 8 0.563088 270 8 0.646699 233 8 0.549229 183 8 0.0879985 248 8 0.110724 211 8 0.000000 99 6 0.0083333 48 3 0.123890 229 8 0.072063 261 8 0.650787 174 7 0.475595 165 8 0.794958 109 4 0.383770 156 5 0.699273 130 6 0.616248 0.316449 0.555947 0.612263 0.536449 0.514848 0.451774 0.487499 0.343721 0.492281 0.643474 0.392147 0.287706 0.500246 0.451421 0.417806 0.460759 0.528542 0.483575 0.493885 0.483447 0.489832 0.604252 0.490692 0.513848 0.524268 0.399288 0.442974 0.539815 0.477958 0.601490 0.527447 0.021401 0.0801669 0.0047480 0.030351 0.065561 0.070339 0.489040 0.477241 0.636653 0.280325 0.569907 2 0.536032 0.606982 -0.03882936 8 0.52704 0.613342 -0.0862988 0.9782210 1.7773e-02 weaklyHypometh 1 0.792390 insignificant 0.982868 0.07203024 insignificant 1 1.00000 insignificant -0.0554299 0.118403 insignificant 1 insignificant 0.536032 0.085766 0.4791245 8 0.52704 0.077163 0.4498806 4.2521e-35 1.0000e+00 hypermethylated 4.2521e-33 1.0000e+00 hypermethylated 1.9077e-16 1.0000000 hypermethylated 3.8155e-14 1 hypermethylated 0.46806674 1.3729e-11 hypermethylated 1.9613e-09 hypermethylated 0.536032 0.529973 0.0127140 6 0.52704 0.617748 -0.090705 5.7418e-01 0.09853240 insignificant 1.0000e+00 1.00000 insignificant 9.2353e-01 0.1547737 insignificant 1.0000e+00 1 insignificant -0.0656417 4.4535e-01 insignificant 1.0000e+00 insignificant 0.606982 0.085766 0.5255571 8 0.613342 0.077163 0.5361794 2.7473e-34 1.0000e+00 hypermethylated 3.4341e-32 1.0000000 hypermethylated 1.0413e-13 1.000000 hypermethylated 2.0826e-11 1 hypermethylated 0.5234967 6.6940e-11 hypermethylated 1.6735e-08 hypermethylated 0.606982 0.529973 0.0460092 6 0.613342 0.617748 -0.00440588 1.9990e-01 0.89782875 insignificant 1.0000e+00 1.00000 insignificant 6.5111e-01 0.673850 insignificant 1.0000e+00 1 insignificant -0.0102118 9.0192e-01 insignificant 1.0000000 insignificant 0.085766 0.529973 -0.4852487 6 0.077163 0.617748 -0.5405853 1.0000e+00 2.5079e-16 hypomethylated 1.0000e+00 5.0158e-14 hypomethylated 1.0000e+00 1.4478e-08 hypomethylated 1.0000000 4.8258e-06 hypomethylated -0.533708 1.3629e-03 weaklyHypometh 0.04157510 weaklyHypometh chr1 27769949 27770949 1080 WASF2 ENSG00000158195 0.20171 101 7 0.21852 80 8 0.29704 141 8 0.258861 106 5 0.216022 97 8 0.17377 155 8 0.271902 97 8 0.28286 110 8 0.240577 131 8 0.183914 178 8 0.200264 125 8 0.241738 111 8 0.242471 104 7 0.157804 109 7 0.127035 191 8 0.230072 108 6 0.194444 30 3 0.249238 106 7 0.137162 117 7 0.188309 127 8 0.123738 91 7 0.055796 80 5 0.16086 104 8 0.215800 129 8 0.053311 77 5 0.17957 149 8 0.101738 263 8 0.134649 150 7 0.240188 96 7 0.211143 125 8 0.138502 153 8 0.355820 90 6 0.2203125 104 5 0.345694 113 7 0.222222 108 8 0.1452381 23 3 0.263660 97 7 0.182768 134 7 0.056283 153 8 0.171650 102 7 0.252957 87 7 0.167045 87 6 0.113012 111 7 0.189505 0.183721 0.237094 0.258277 0.191632 0.168194 0.245558 0.238927 0.209661 0.181774 0.168892 0.194157 0.197845 0.113358 0.104642 0.174449 0.223799 0.100671 0.118750 0.147026 0.169088 0.068487 0.118256 0.152069 0.054589 0.174624 0.112231 0.151831 0.219199 0.172136 0.123335 0.287267 0.209457 0.2937179 0.2086957 0.204530 0.215848 0.153007 0.063132 0.066925 0.191444 0.062134 0.089651 4 0.180723 0.157266 0.03344927 8 0.29604 0.204507 0.0915305 0.0111599 9.5921e-01 weaklyHypermeth 1 1.000000 insignificant 0.016154 0.97250530 weaklyHypermeth 1 1.00000 insignificant 0.0514259 0.071742 insignificant 1 insignificant 0.180723 0.202073 0.0203601 7 0.29604 0.208376 0.0876616 1.5050e-02 6.6086e-04 weaklyHypermeth 1.1667e-01 6.6086e-02 weaklyHypermeth 1.4472e-02 0.1676145 weaklyHypermeth 1.3653e-01 1 insignificant -0.01429644 6.5154e-01 insignificant 1.0000e+00 insignificant 0.180723 0.087037 0.0852033 7 0.29604 0.206480 0.089557 1.5618e-05 0.98795724 weaklyHypermeth 4.8806e-04 1.00000 weaklyHypermeth 2.6708e-04 0.9772106 weaklyHypermeth 9.5384e-03 1 weaklyHypermeth 0.0634965 1.2610e-01 insignificant 1.0000e+00 insignificant 0.157266 0.202073 -0.0116471 7 0.204507 0.208376 -0.0038689 4.4509e-01 1.3316e-03 weaklyHypometh 1.0000e+00 0.2219286 insignificant 3.7425e-01 0.062285 insignificant 1.0000e+00 1 insignificant -0.0657223 1.0410e-01 insignificant 8.9739e-01 insignificant 0.157266 0.087037 0.0688972 7 0.204507 0.206480 -0.00197327 2.1695e-03 0.86776188 weaklyHypermeth 4.3390e-02 1.00000 weaklyHypermeth 2.0902e-02 0.936062 weaklyHypermeth 3.2157e-01 1 insignificant 0.0120706 7.7469e-01 insignificant 1.0000000 insignificant 0.202073 0.087037 0.1519989 6 0.208376 0.206480 0.0018956 8.1023e-05 9.8824e-01 weaklyHypermeth 1.0128e-02 1.0000e+00 weaklyHypermeth 7.6966e-02 8.9758e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.077793 1.0836e-01 insignificant 1.00000000 insignificant chr1 27770107 27771107 1081 WASF2 ENSG00000158195 0.20171 101 7 0.21852 80 8 0.29704 141 8 0.258861 106 5 0.216022 97 8 0.17377 155 8 0.271902 97 8 0.28286 110 8 0.240577 131 8 0.183914 178 8 0.200264 125 8 0.241738 111 8 0.242471 104 7 0.157804 109 7 0.127035 191 8 0.230072 108 6 0.194444 30 3 0.249238 106 7 0.137162 117 7 0.188309 127 8 0.123738 91 7 0.055796 80 5 0.16086 104 8 0.215800 129 8 0.053311 77 5 0.17957 149 8 0.101738 263 8 0.134649 150 7 0.240188 96 7 0.211143 125 8 0.138502 153 8 0.355820 90 6 0.2203125 104 5 0.345694 113 7 0.222222 108 8 0.1452381 23 3 0.263660 97 7 0.182768 134 7 0.056283 153 8 0.171650 102 7 0.252957 87 7 0.167045 87 6 0.113012 111 7 0.189505 0.183721 0.237094 0.258277 0.191632 0.168194 0.245558 0.238927 0.209661 0.181774 0.168892 0.194157 0.197845 0.113358 0.104642 0.174449 0.223799 0.100671 0.118750 0.147026 0.169088 0.068487 0.118256 0.152069 0.054589 0.174624 0.112231 0.151831 0.219199 0.172136 0.123335 0.287267 0.209457 0.2937179 0.2086957 0.204530 0.215848 0.153007 0.063132 0.066925 0.191444 0.062134 0.089651 4 0.180723 0.157266 0.03344927 8 0.29604 0.204507 0.0915305 0.0111599 9.5921e-01 weaklyHypermeth 1 1.000000 insignificant 0.016154 0.97250530 weaklyHypermeth 1 1.00000 insignificant 0.0514259 0.071742 insignificant 1 insignificant 0.180723 0.202073 0.0203601 7 0.29604 0.208376 0.0876616 1.5050e-02 6.6086e-04 weaklyHypermeth 1.1667e-01 6.6086e-02 weaklyHypermeth 1.4472e-02 0.1676145 weaklyHypermeth 1.3653e-01 1 insignificant -0.01429644 6.5154e-01 insignificant 1.0000e+00 insignificant 0.180723 0.087037 0.0852033 7 0.29604 0.206480 0.089557 1.5618e-05 0.98795724 weaklyHypermeth 4.8806e-04 1.00000 weaklyHypermeth 2.6708e-04 0.9772106 weaklyHypermeth 9.5384e-03 1 weaklyHypermeth 0.0634965 1.2610e-01 insignificant 1.0000e+00 insignificant 0.157266 0.202073 -0.0116471 7 0.204507 0.208376 -0.0038689 4.4509e-01 1.3316e-03 weaklyHypometh 1.0000e+00 0.2219286 insignificant 3.7425e-01 0.062285 insignificant 1.0000e+00 1 insignificant -0.0657223 1.0410e-01 insignificant 8.9739e-01 insignificant 0.157266 0.087037 0.0688972 7 0.204507 0.206480 -0.00197327 2.1695e-03 0.86776188 weaklyHypermeth 4.3390e-02 1.00000 weaklyHypermeth 2.0902e-02 0.936062 weaklyHypermeth 3.2157e-01 1 insignificant 0.0120706 7.7469e-01 insignificant 1.0000000 insignificant 0.202073 0.087037 0.1519989 6 0.208376 0.206480 0.0018956 8.1023e-05 9.8824e-01 weaklyHypermeth 1.0128e-02 1.0000e+00 weaklyHypermeth 7.6966e-02 8.9758e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.077793 1.0836e-01 insignificant 1.00000000 insignificant chr1 27800153 27801153 1102 WASF2 ENSG00000158195 0.46088 263 9 0.49768 351 9 0.58855 223 9 0.425640 265 6 0.549244 167 7 0.67875 250 6 0.686895 232 9 0.54476 262 9 0.562769 245 9 0.563160 223 9 0.631409 414 9 0.539586 190 9 0.397309 371 9 NA 0 0 0.413169 214 9 0.407560 108 7 0.294191 312 9 0.591345 337 6 0.471378 277 9 0.431626 247 9 0.631731 150 9 0.192327 190 5 0.59677 198 6 0.388998 104 8 0.395029 124 5 0.67007 451 9 0.451764 151 8 0.273401 58 4 0.599024 347 9 0.692916 462 9 0.343913 431 9 0.540949 310 9 0.0104142 303 9 0.013294 268 9 0.155556 252 7 0.0648148 117 5 0.076602 111 9 0.035937 405 9 0.270581 299 6 0.187069 321 9 0.232684 279 6 0.180521 333 5 0.237862 341 6 0.423511 0.489341 0.587003 0.401262 0.575447 0.580338 0.667780 0.485276 0.526949 0.490919 0.601944 0.546625 0.335365 NA 0.424130 0.408942 0.211166 0.401334 0.388409 0.431540 0.616884 0.172599 0.581328 0.478030 0.413539 0.607101 0.519145 0.417106 0.544424 0.679386 0.334502 0.579547 0.014636 0.0039491 0.2122619 0.043516 0.025004 0.021108 0.281301 0.188212 0.228649 0.142394 0.179587 4 0.477883 0.528226 -0.05803219 9 0.49432 0.551536 -0.0572209 0.9994938 2.1203e-02 weaklyHypometh 1 0.792390 insignificant 0.797353 0.46079470 insignificant 1 1.00000 insignificant 0.0310081 0.566326 insignificant 1 insignificant 0.477883 0.027473 0.4500761 9 0.49432 0.032661 0.4616540 3.7360e-52 1.0000e+00 hypermethylated 1.8680e-49 1.0000e+00 hypermethylated 5.2688e-21 1.0000000 hypermethylated 2.6344e-18 1 hypermethylated 0.45297927 1.0042e-10 hypermethylated 1.1158e-08 hypermethylated 0.477883 0.215512 0.2526953 6 0.49432 0.217576 0.276739 2.5232e-20 1.00000000 hypermethylated 1.2616e-17 1.00000 hypermethylated 3.6781e-15 1.0000000 hypermethylated 3.6781e-12 1 hypermethylated 0.2906722 5.3176e-09 hypermethylated 5.3176e-06 hypermethylated 0.528226 0.027473 0.5018472 9 0.551536 0.032661 0.5188749 4.8799e-37 1.0000e+00 hypermethylated 9.7598e-35 1.0000000 hypermethylated 2.2984e-15 1.000000 hypermethylated 1.1492e-12 1 hypermethylated 0.4219711 8.5684e-07 hypermethylated 5.0402e-05 hypermethylated 0.528226 0.215512 0.3090663 6 0.551536 0.217576 0.33395975 2.9759e-15 1.00000000 hypermethylated 4.2513e-13 1.00000 hypermethylated 1.6672e-09 1.000000 hypermethylated 5.5478e-07 1 hypermethylated 0.2596641 1.6636e-04 hypermethylated 0.0167647 hypermethylated 0.027473 0.215512 -0.1852698 6 0.032661 0.217576 -0.1849151 1.0000e+00 1.5598e-11 weaklyHypometh 1.0000e+00 1.1141e-09 weaklyHypometh 9.9991e-01 1.1416e-05 weaklyHypometh 1.0000000 1.0379e-03 weaklyHypometh -0.162307 2.6952e-04 weaklyHypometh 0.01585392 weaklyHypometh chr1 28551719 28552719 1116 MED18 ENSG00000130772 0.72237 246 8 0.58519 195 8 0.52856 172 8 0.669735 173 8 0.620398 61 6 0.67142 353 8 0.573810 82 8 0.73702 178 8 0.616071 108 8 0.623106 77 8 0.663029 245 8 0.625992 57 5 0.788299 98 5 0.679487 44 5 0.680928 109 8 0.389319 56 5 0.631061 52 6 0.638025 155 8 0.739939 149 8 0.662130 260 8 0.625000 40 3 0.718693 95 8 0.65982 159 8 0.748758 118 8 0.771962 78 8 0.68486 209 8 0.650361 100 8 0.666667 56 5 0.601989 132 8 0.727090 243 8 0.683707 215 8 0.676736 388 8 0.6202743 141 8 0.582005 136 8 0.633002 211 8 0.6594888 67 5 0.622499 112 7 0.653225 249 8 0.663100 239 8 0.705297 228 8 0.692114 192 8 0.676356 160 8 0.708598 196 8 0.717722 0.590104 0.524120 0.679123 0.626951 0.653483 0.605474 0.732586 0.585506 0.605950 0.658379 0.610126 0.718219 0.654309 0.674574 0.446387 0.601062 0.650448 0.712203 0.654455 0.660584 0.686121 0.676514 0.707844 0.734147 0.684665 0.660308 0.687348 0.603288 0.726346 0.682297 0.664101 0.615117 0.5585727 0.6092453 0.718124 0.629498 0.632382 0.671845 0.712240 0.680712 0.640669 0.708581 5 0.660627 0.695035 -0.03280200 8 0.65521 0.689545 -0.0343348 0.9926640 1.4910e-02 weaklyHypometh 1 0.792390 insignificant 0.993180 0.01349558 weaklyHypometh 1 0.82004 insignificant -0.0423416 0.086475 insignificant 1 insignificant 0.660627 0.625546 0.0325795 8 0.65521 0.624959 0.0302508 1.2312e-01 9.3330e-01 insignificant 8.1000e-01 1.0000e+00 insignificant 9.5657e-02 0.7708047 insignificant 7.3021e-01 1 insignificant 0.01387899 5.3779e-01 insignificant 1.0000e+00 insignificant 0.660627 0.680788 -0.0350639 8 0.65521 0.688833 -0.033623 9.9211e-01 0.11609282 insignificant 1.0000e+00 1.00000 insignificant 9.8049e-01 0.0881741 insignificant 1.0000e+00 1 insignificant -0.0467984 3.5455e-02 weaklyHypometh 6.4464e-01 insignificant 0.695035 0.625546 0.0643159 8 0.689545 0.624959 0.0645856 2.1358e-05 9.9624e-01 weaklyHypermeth 2.6697e-04 1.0000000 weaklyHypermeth 8.4702e-04 0.993671 weaklyHypermeth 1.1349e-02 1 weaklyHypermeth 0.0562205 7.4678e-03 weaklyHypermeth 1.0668e-01 insignificant 0.695035 0.680788 -0.0033439 8 0.689545 0.688833 0.00071163 5.0976e-01 0.64053484 insignificant 1.0000e+00 1.00000 insignificant 4.8934e-01 0.671735 insignificant 1.0000e+00 1 insignificant -0.0044569 7.9397e-01 insignificant 1.0000000 insignificant 0.625546 0.680788 -0.0667867 8 0.624959 0.688833 -0.0638739 9.9898e-01 6.8947e-03 weaklyHypometh 1.0000e+00 8.7274e-02 weaklyHypometh 9.9758e-01 3.7939e-02 weaklyHypometh 1.0000000 4.5166e-01 insignificant -0.060677 2.2369e-03 weaklyHypometh 0.05896808 weaklyHypometh chr1 28792343 28793343 1121 RAB42 ENSG00000188060 0.78296 301 8 0.85915 298 8 0.72220 153 8 0.939323 329 8 0.809145 101 8 0.92604 396 8 0.556693 134 8 0.76364 235 8 0.794364 185 8 0.786725 119 8 0.893642 340 8 0.685592 36 2 0.769979 197 8 0.704847 143 7 0.874476 170 7 0.782468 46 4 0.798095 36 4 0.898951 348 8 0.898698 227 8 0.943461 280 7 0.720599 103 5 0.843573 122 7 0.83899 189 8 0.732168 126 7 0.945457 176 8 0.89913 336 8 0.822987 110 5 0.554849 84 6 0.921008 204 9 0.837147 386 8 0.841336 321 8 0.880429 333 8 0.8926186 207 8 0.951626 168 8 0.833333 92 6 0.9206349 69 3 0.527708 200 8 0.736533 313 8 0.836523 209 8 0.926042 251 8 0.821375 211 8 0.882042 168 7 0.848087 258 8 0.911939 0.870440 0.782780 0.939560 0.858993 0.916141 0.841230 0.929163 0.864227 0.924404 0.885659 0.723595 0.863729 0.865495 0.904218 0.831582 0.889990 0.904802 0.902604 0.933624 0.848788 0.893598 0.874892 0.876038 0.926810 0.924068 0.881338 0.862494 0.917568 0.887321 0.875997 0.917547 0.939744 0.9558410 0.9232305 0.953636 0.873278 0.937253 0.928135 0.944450 0.869669 0.920404 0.891141 5 0.892463 0.892525 0.00347013 8 0.73233 0.705410 0.0269223 0.4700264 8.1735e-01 insignificant 1 1.000000 insignificant 0.840701 0.77002203 insignificant 1 1.00000 insignificant -0.0102829 0.788176 insignificant 1 insignificant 0.892410 0.914040 -0.0297492 8 0.68105 0.580791 0.1002591 9.8585e-01 7.7379e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9918e-01 0.0471187 weaklyHypometh 1.0000e+00 1 insignificant -0.00088576 9.9003e-01 insignificant 1.0000e+00 insignificant 0.894141 0.907931 -0.0128122 8 0.74427 0.823735 -0.079464 7.5639e-01 0.03070294 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8056e-01 0.0968128 insignificant 1.0000e+00 1 insignificant -0.0532908 8.2520e-02 insignificant 1.0000e+00 insignificant 0.892208 0.914995 -0.0334050 8 0.705410 0.657714 0.0476957 9.4830e-01 1.3938e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.3521e-01 0.012487 weaklyHypometh 1.0000e+00 1 insignificant 0.0093972 8.9892e-01 insignificant 1.0000e+00 insignificant 0.895977 0.907847 -0.0137199 8 0.838461 0.806109 0.03235229 8.7767e-01 0.03030108 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.6587e-01 0.036001 weaklyHypometh 1.0000e+00 1 insignificant -0.0430079 2.5144e-01 insignificant 1.0000000 insignificant 0.924565 0.907847 0.0209961 8 0.742528 0.806109 -0.0635808 7.8850e-01 8.6857e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3279e-01 9.3563e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.052405 4.6562e-01 insignificant 1.00000000 insignificant chr1 29447974 29448974 1153 PTPRU ENSG00000060656 0.63195 269 7 0.61044 127 7 0.71896 173 7 0.578162 288 7 0.662358 74 7 0.71923 377 7 0.534026 177 7 0.70455 140 7 0.639878 226 7 0.570163 165 7 0.709465 197 7 0.624471 105 6 0.783599 187 6 0.722035 140 7 0.677484 177 7 0.700000 63 5 0.926818 72 4 0.732097 337 7 0.876984 80 6 0.709225 266 7 0.789166 89 7 0.697827 130 6 0.60833 171 7 0.612733 80 7 0.680534 116 4 0.64851 175 7 0.611971 128 7 0.597522 103 6 0.616162 86 7 0.766991 190 7 0.794290 219 7 0.709195 312 7 0.6357684 130 7 0.784763 92 5 0.740000 82 4 0.6758059 73 4 0.824053 181 6 0.757609 135 7 0.715786 311 7 0.744310 275 7 0.669175 271 6 0.706443 305 6 0.708405 231 7 0.656391 0.670882 0.723583 0.605459 0.683561 0.760692 0.642853 0.703919 0.651441 0.604547 0.713740 0.701244 0.815694 0.760820 0.715558 0.770704 0.841952 0.760209 0.923491 0.730916 0.774880 0.744313 0.608457 0.687212 0.733912 0.664047 0.726611 0.596721 0.648020 0.785005 0.831450 0.726037 0.680521 0.7846848 0.5734228 0.749957 0.833392 0.837158 0.748041 0.774913 0.722620 0.748762 0.791811 4 0.705769 0.691495 -0.00022224 7 0.59817 0.721436 -0.1232647 0.6656198 6.9231e-01 insignificant 1 1.000000 insignificant 0.467818 0.72893167 insignificant 1 1.00000 insignificant 0.0138255 0.650427 insignificant 1 insignificant 0.705963 0.728716 -0.0592865 7 0.68362 0.722797 -0.0391723 1.3718e-01 1.8234e-03 weaklyHypometh 8.7938e-01 1.6576e-01 insignificant 8.6285e-01 0.0260359 weaklyHypometh 1.0000e+00 1 insignificant -0.04473831 2.3418e-01 insignificant 1.0000e+00 insignificant 0.705963 0.743719 -0.0451134 7 0.68362 0.707043 -0.023419 1.9217e-01 0.00087121 weaklyHypometh 1.0000e+00 0.43561 insignificant 4.8294e-01 0.0033979 weaklyHypometh 1.0000e+00 1 insignificant -0.0172288 4.8981e-01 insignificant 1.0000e+00 insignificant 0.691324 0.728716 -0.0600778 7 0.681641 0.722797 -0.0411555 4.8794e-01 3.6847e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.7737e-01 0.055732 insignificant 1.0000e+00 1 insignificant -0.0585638 1.2848e-01 insignificant 1.0000e+00 insignificant 0.691324 0.743719 -0.0363442 7 0.681641 0.707043 -0.02540225 6.1157e-01 0.00951780 weaklyHypometh 1.0000e+00 1.00000 insignificant 6.5611e-01 0.003803 weaklyHypometh 1.0000e+00 1 insignificant -0.0310543 2.2332e-01 insignificant 1.0000000 insignificant 0.728716 0.743719 0.0200920 7 0.722797 0.707043 0.0157532 1.2009e-01 1.5568e-02 inconclusive 1.0000e+00 1.7691e-01 insignificant 5.8677e-02 2.5861e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.027510 4.0400e-01 insignificant 1.00000000 insignificant chr1 31991964 31992964 1200 COL16A1 ENSG00000084636 0.94167 360 7 0.89940 130 7 0.92339 147 8 0.959020 388 6 0.915359 106 7 0.95235 316 7 0.812788 162 8 0.89656 101 8 0.851994 129 7 0.934722 123 8 0.939286 202 8 0.851366 111 7 0.935055 184 8 NA 0 0 0.920473 145 7 0.888209 63 7 0.882349 110 8 0.881174 413 6 0.934059 141 7 0.931780 247 7 0.915168 92 8 0.916663 142 6 0.89419 184 7 0.974330 108 7 0.790324 107 6 0.94848 198 7 0.905051 138 8 0.892282 82 8 0.901812 127 7 0.952946 207 7 0.946784 177 8 0.932749 322 8 0.6402727 164 8 0.555489 195 7 0.571429 45 2 0.6370536 71 7 0.833036 115 8 0.465124 236 8 0.893924 280 7 0.896347 307 7 0.907723 306 7 0.943393 372 6 0.751262 332 6 0.933994 0.885957 0.941185 0.955348 0.907854 0.956573 0.854974 0.914179 0.902612 0.957271 0.945103 0.884947 0.944000 NA 0.924970 0.933845 0.876512 0.911506 0.942190 0.970052 0.911899 0.919492 0.900977 0.968780 0.883311 0.947859 0.896252 0.866712 0.896138 0.948997 0.940754 0.950740 0.771234 0.6339836 NA 0.821821 0.915229 0.558314 0.884054 0.889610 0.919208 0.924804 0.834252 6 0.920626 0.925159 -0.00755561 7 0.91558 0.929329 -0.0137506 0.7370108 1.6367e-01 insignificant 1 1.000000 insignificant 0.833261 0.25889156 insignificant 1 1.00000 insignificant -0.0062835 0.702255 insignificant 1 insignificant 0.920626 0.587167 0.2799038 7 0.91558 0.603863 0.3117157 1.4751e-27 1.0000e+00 hypermethylated 7.7635e-26 1.0000e+00 hypermethylated 2.1580e-09 1.0000000 hypermethylated 1.2694e-07 1 hypermethylated 0.29088061 1.9427e-03 weaklyHypermeth 3.6655e-02 weaklyHypermeth 0.920626 0.890420 0.0386464 7 0.91558 0.869868 0.045710 6.4833e-05 0.69887378 weaklyHypermeth 1.7523e-03 1.00000 weaklyHypermeth 3.2385e-03 0.5446682 weaklyHypermeth 7.8988e-02 1 weaklyHypermeth 0.0294180 4.3231e-01 insignificant 1.0000e+00 insignificant 0.925159 0.587167 0.3016929 7 0.929329 0.603863 0.3254663 1.8268e-22 1.0000e+00 hypermethylated 1.1417e-20 1.0000000 hypermethylated 1.8534e-07 0.999994 hypermethylated 9.2672e-06 1 hypermethylated 0.2971641 1.4969e-03 weaklyHypermeth 3.1659e-02 weaklyHypermeth 0.925159 0.890420 0.0358306 7 0.929329 0.869868 0.05946072 7.9853e-05 0.89798632 weaklyHypermeth 2.1582e-03 1.00000 weaklyHypermeth 2.6861e-03 0.918544 weaklyHypermeth 7.0686e-02 1 weaklyHypermeth 0.0357015 3.5982e-01 insignificant 1.0000000 insignificant 0.587167 0.890420 -0.1979101 7 0.603863 0.869868 -0.2660056 1.0000e+00 2.1190e-06 weaklyHypometh 1.0000e+00 6.0543e-05 weaklyHypometh 9.9992e-01 1.0037e-03 weaklyHypometh 1.0000000 2.3732e-02 weaklyHypometh -0.261463 2.2998e-03 weaklyHypometh 0.05896808 weaklyHypometh chr1 32157239 32158239 1221 ENSG00000212673 0.61189 94 5 0.57252 70 3 0.66349 31 5 0.714286 70 3 0.810185 19 2 0.69314 51 3 0.620513 39 3 0.62576 82 5 0.736111 27 2 0.700000 24 2 0.664677 99 3 0.405556 18 2 0.581548 105 5 0.479167 57 5 0.626667 34 5 0.646429 21 2 0.666667 5 0 0.733546 92 2 0.633333 32 3 0.713889 46 3 0.700000 29 4 1.000000 2 0 0.70588 56 4 0.655556 33 5 0.799220 43 3 0.65873 65 5 0.570000 32 3 0.516667 21 2 0.670000 68 4 0.656970 75 5 0.633636 65 5 0.685470 42 3 0.5830198 69 5 0.591667 55 5 0.736957 136 5 0.7916667 17 2 0.522028 54 4 0.724242 80 5 0.407293 65 3 0.713043 62 3 0.630978 70 3 0.941176 35 2 0.733333 49 3 0.793698 0.734493 0.785948 0.823185 0.764572 0.799582 0.771858 0.759066 0.822404 0.795082 0.751798 0.765027 0.836066 0.586066 0.724954 0.805913 0.590164 0.760852 0.653005 0.853370 0.793033 0.770502 0.805207 0.758652 0.750551 0.778819 0.627049 0.726776 0.731148 0.788251 0.700522 0.792630 0.619809 0.7497723 0.7861725 0.743852 0.574401 0.780924 0.651861 0.820385 0.667587 0.930780 0.733607 1 0.682493 0.661017 0.00553490 5 0.64755 0.646009 0.0015452 0.4219508 5.7469e-01 insignificant 1 1.000000 insignificant 0.603711 0.35203103 insignificant 1 1.00000 insignificant -0.0427091 0.302311 lowCoverage 1 lowCoverage 0.681102 0.632603 0.0326270 5 0.60630 0.683531 -0.0772359 1.6420e-01 5.7251e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3903e-01 0.5891510 insignificant 1.0000e+00 1 insignificant -0.01329486 7.8978e-01 lowCoverage 1.0000e+00 lowCoverage 0.682493 0.740214 0.0133417 3 0.64755 0.634300 0.013254 5.0211e-01 0.63695951 lowCoverage 1.0000e+00 1.00000 lowCoverage 5.0219e-01 0.7148812 lowCoverage 1.0000e+00 1 lowCoverage -0.0401965 6.7131e-01 lowCoverage 1.0000e+00 lowCoverage 0.661017 0.630807 0.0254991 5 0.646009 0.620237 0.0257717 2.2762e-01 9.4198e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.6974e-01 0.959672 insignificant 1.0000e+00 1 insignificant 0.0294143 6.0803e-01 lowCoverage 1.0000e+00 lowCoverage 0.661017 0.740214 -0.0080284 3 0.646009 0.634300 0.01170919 5.5868e-01 0.62745945 lowCoverage 1.0000e+00 1.00000 lowCoverage 4.7448e-01 0.909163 lowCoverage 1.0000e+00 1 lowCoverage 0.0025126 9.7942e-01 lowCoverage 1.0000000 lowCoverage 0.630807 0.740214 -0.0399999 3 0.620237 0.634300 -0.0140625 7.3705e-01 3.4629e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2725e-01 6.3545e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.026902 7.9009e-01 lowCoverage 1.00000000 lowCoverage chr1 32168234 32169234 1224 ENSG00000212673 0.84694 338 11 0.71635 193 11 0.68317 133 11 0.873095 208 10 0.681474 94 11 0.82292 323 10 0.735074 124 7 0.73674 165 11 0.753663 137 11 0.808391 121 9 0.819162 256 11 0.717293 95 9 0.785774 172 11 0.841667 43 5 0.820688 197 11 0.659780 62 7 0.598135 70 6 0.710070 198 10 0.794632 212 11 0.879397 310 11 0.842172 48 5 0.824339 113 10 0.75263 167 11 0.751771 93 9 0.750536 77 10 0.67612 205 10 0.817208 109 9 0.944444 38 2 0.655534 124 9 0.758930 214 10 0.751598 189 10 0.713959 378 10 0.8224423 132 9 0.729885 134 11 0.662315 272 11 0.8114380 81 5 0.623062 66 5 0.795734 172 10 0.824773 272 10 0.886780 338 10 0.800613 255 10 0.831673 274 10 0.881100 332 10 0.825530 0.717361 0.680389 0.850802 0.715998 0.873533 0.707103 0.825311 0.846812 0.765606 0.846618 0.747470 0.874551 0.838448 0.783218 0.661487 0.637148 0.823519 0.806646 0.869870 0.833739 0.826515 0.756082 0.794340 0.775541 0.801211 0.817583 0.929731 0.832896 0.831144 0.738284 0.812680 0.763703 0.6824441 0.7238779 0.800657 0.584529 0.784100 0.867588 0.873896 0.835197 0.854009 0.888690 5 0.811649 0.801140 0.00539911 10 0.78296 0.685449 0.0975102 0.2647481 8.2905e-01 insignificant 1 1.000000 insignificant 0.565781 0.24583729 insignificant 1 1.00000 insignificant -0.0057154 0.842129 insignificant 1 insignificant 0.811607 0.777130 0.0473012 11 0.78353 0.745867 0.0376619 7.8712e-03 9.2756e-01 weaklyHypermeth 6.5593e-02 1.0000e+00 weaklyHypermeth 7.5067e-02 0.6965100 insignificant 5.8646e-01 1 insignificant 0.02340805 5.5708e-01 insignificant 1.0000e+00 insignificant 0.812100 0.853841 -0.0478313 10 0.80018 0.875097 -0.074916 9.9995e-01 0.00883629 weaklyHypometh 1.0000e+00 1.00000 insignificant 1.0000e+00 0.0031225 weaklyHypometh 1.0000e+00 1 insignificant -0.0807672 4.7389e-03 weaklyHypometh 1.7825e-01 insignificant 0.802744 0.777130 0.0476643 10 0.747266 0.745867 0.0013983 3.4187e-02 9.0327e-01 weaklyHypermeth 2.6501e-01 1.0000000 insignificant 8.8234e-03 0.931856 weaklyHypermeth 9.1911e-02 1 weaklyHypermeth 0.0291234 4.9323e-01 insignificant 1.0000e+00 insignificant 0.802857 0.853841 -0.0521992 10 0.766707 0.875097 -0.10839004 9.9956e-01 0.00096527 weaklyHypometh 1.0000e+00 0.96527 insignificant 9.9387e-01 0.019600 weaklyHypometh 1.0000e+00 1 insignificant -0.0750519 1.7955e-02 weaklyHypometh 0.5186611 insignificant 0.777130 0.853741 -0.0983691 10 0.745867 0.864688 -0.1188209 9.9984e-01 6.7300e-04 weaklyHypometh 1.0000e+00 1.1217e-02 weaklyHypometh 9.9928e-01 4.4132e-04 weaklyHypometh 1.0000000 1.4711e-02 weaklyHypometh -0.104175 2.8014e-02 weaklyHypometh 0.39455848 insignificant chr1 32314287 32315287 1233 TMEM39B ENSG00000121775 0.81011 153 5 0.58638 125 5 0.80184 72 5 0.796846 133 5 0.699495 64 5 0.83436 107 5 0.688095 37 5 0.86551 117 5 0.778030 62 5 0.642857 71 5 0.832585 160 5 0.500000 4 0 0.834799 91 5 0.890909 35 1 0.917204 71 5 0.360000 9 1 0.800000 6 0 0.776533 159 5 0.712121 111 5 0.750407 130 5 0.694444 27 1 0.862270 59 5 0.81837 75 5 0.854101 65 5 0.828333 65 5 0.69981 111 5 0.733333 63 5 0.833333 20 1 0.780003 94 5 0.884782 97 5 0.778737 138 5 0.812577 156 5 0.8468766 90 5 0.574545 67 5 0.629960 107 5 0.9250000 16 1 0.496970 44 1 0.760440 124 5 0.756794 97 5 0.885516 191 5 0.851648 157 5 0.893301 82 5 0.851242 129 5 0.849587 0.671953 0.851227 0.878722 0.727579 0.857636 0.718134 0.903883 0.787879 0.911616 0.854531 NA 0.896677 0.918733 0.902835 0.553535 0.888889 0.831155 0.921028 0.834030 0.872054 0.875358 0.846801 0.910653 0.875449 0.877341 0.779461 0.907407 0.830012 0.884624 0.869877 0.838812 0.785801 0.4715488 0.8236532 0.787879 0.642945 0.792008 0.835234 0.910300 0.919386 0.906674 0.889637 1 0.815376 0.839175 -0.01747685 5 0.72150 0.768061 -0.0465588 0.9322361 2.9391e-01 insignificant 1 1.000000 insignificant 0.924199 0.43922297 insignificant 1 1.00000 insignificant -0.0544372 0.135838 lowCoverage 1 lowCoverage 0.815376 0.747768 0.0740906 5 0.72150 0.737701 -0.0161991 4.8638e-02 9.3162e-01 weaklyHypermeth 3.4991e-01 1.0000e+00 insignificant 1.0899e-01 0.9469470 insignificant 8.1951e-01 1 insignificant 0.03827140 6.2190e-01 lowCoverage 1.0000e+00 lowCoverage 0.817274 0.870427 -0.0619832 5 0.78283 0.854147 -0.071317 9.9957e-01 0.01488396 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9771e-01 0.0439384 weaklyHypometh 1.0000e+00 1 insignificant -0.1037971 1.6256e-02 lowCoverage 3.7805e-01 lowCoverage 0.839175 0.747768 0.0916413 5 0.768061 0.737701 0.0303597 1.6514e-02 9.8414e-01 weaklyHypermeth 1.3995e-01 1.0000000 insignificant 9.4677e-03 0.989935 weaklyHypermeth 9.5633e-02 1 weaklyHypermeth 0.0927086 2.3619e-01 lowCoverage 1.0000e+00 lowCoverage 0.840791 0.870427 -0.0431957 5 0.805285 0.854147 -0.04886207 9.9710e-01 0.01709678 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.7996e-01 0.074889 insignificant 1.0000e+00 1 insignificant -0.0493599 1.3843e-01 lowCoverage 1.0000000 lowCoverage 0.748315 0.870427 -0.1354965 5 0.732782 0.854147 -0.1213657 9.9991e-01 9.9313e-04 weaklyHypometh 1.0000e+00 1.6281e-02 weaklyHypometh 9.9891e-01 1.6774e-03 weaklyHypometh 1.0000000 3.3161e-02 weaklyHypometh -0.142068 9.3832e-02 lowCoverage 0.97183901 lowCoverage chr1 33120340 33121340 1253 FNDC5 ENSG00000160097 0.45437 152 4 0.59130 193 6 0.61007 203 6 0.784670 60 3 0.566665 175 6 0.60492 107 5 0.604104 216 6 0.56315 149 6 0.586288 206 6 0.611976 177 6 0.631357 221 6 0.520895 166 6 0.595249 206 6 NA 0 0 0.504562 157 6 0.603127 158 6 0.554492 195 6 0.644167 53 3 0.690460 165 6 0.629798 128 6 0.478427 46 5 0.473950 49 3 0.41412 124 6 0.533883 94 6 0.560000 18 3 0.60184 224 6 0.567424 74 6 0.643094 77 6 0.655394 157 6 0.604727 220 6 0.623885 217 6 0.656770 201 5 0.3661944 213 6 0.354658 136 6 0.306878 123 6 0.3592593 34 3 0.380666 65 6 0.389727 196 6 0.645315 100 4 0.676409 104 5 0.505772 70 3 0.920635 126 3 0.519316 112 4 0.724318 0.725716 0.667044 0.742158 0.748159 0.676301 0.694436 0.683824 0.773068 0.775559 0.779727 0.682685 0.738466 NA 0.671501 0.825476 0.743428 0.815803 0.849553 0.736091 0.655640 0.735011 0.622531 0.659464 0.851067 0.749673 0.633989 0.665470 0.780561 0.656094 0.818847 0.731196 0.652229 0.6362611 0.5580970 0.651186 0.674589 0.698597 0.760297 0.853881 0.774223 0.862677 0.796726 3 0.518303 0.592272 -0.01496495 6 0.58599 0.595990 -0.0099962 0.5317040 1.8299e-01 insignificant 1 1.000000 insignificant 0.166061 0.73928207 insignificant 1 1.00000 insignificant 0.0296600 0.298790 insignificant 1 insignificant 0.518303 0.315515 0.2211972 6 0.58599 0.361058 0.2249360 5.1732e-20 9.9998e-01 hypermethylated 1.7839e-18 1.0000e+00 hypermethylated 2.3339e-09 0.9984777 hypermethylated 1.2966e-07 1 hypermethylated 0.23788944 9.1682e-11 hypermethylated 1.1158e-08 hypermethylated 0.518303 0.830078 -0.0825780 3 0.58599 0.635512 -0.049519 9.1522e-01 0.00730465 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.5828e-01 0.0679962 lowCoverage 1.0000e+00 1 lowCoverage -0.0560363 5.0096e-01 lowCoverage 1.0000e+00 lowCoverage 0.592272 0.315515 0.2211353 6 0.595990 0.361058 0.2349323 8.4222e-13 9.9939e-01 hypermethylated 2.6319e-11 1.0000000 hypermethylated 6.0818e-06 0.994775 hypermethylated 1.7888e-04 1 hypermethylated 0.2082294 6.3858e-07 hypermethylated 3.9911e-05 hypermethylated 0.592272 0.830078 -0.0983929 3 0.595990 0.635512 -0.03952243 9.2099e-01 0.00667174 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.0212e-01 0.014381 lowCoverage 1.0000e+00 1 lowCoverage -0.0856963 3.2519e-01 lowCoverage 1.0000000 lowCoverage 0.315515 0.830078 -0.1900449 3 0.361058 0.635512 -0.2744547 1.0000e+00 6.0868e-08 lowCoverage 1.0000e+00 2.1739e-06 lowCoverage 1.0000e+00 6.7011e-05 lowCoverage 1.0000000 3.9978e-03 lowCoverage -0.293926 1.6214e-02 lowCoverage 0.27023100 lowCoverage chr1 33122522 33123522 1254 FNDC5 ENSG00000160097 0.88842 78 4 0.67597 58 5 0.67667 103 5 0.850053 79 3 0.669097 125 5 0.65815 64 5 0.739250 57 4 0.66333 66 5 0.645437 56 5 0.767206 74 5 0.792772 211 5 0.745635 43 5 0.568810 109 5 0.562698 48 3 0.665973 75 5 0.632143 23 2 0.481061 23 2 0.509368 61 3 0.625539 105 5 0.659394 36 3 0.906232 88 5 0.644444 57 3 0.76237 148 5 0.472756 45 5 0.878495 106 3 0.75926 90 5 0.570555 128 5 0.857500 46 3 0.565645 80 5 0.674729 85 5 0.658689 90 5 0.806984 64 5 0.3042296 145 5 0.334214 144 5 0.397223 236 5 0.0000000 12 2 0.323507 67 5 0.299249 112 5 0.577574 69 3 0.760714 95 5 0.636902 61 3 0.683333 41 3 0.613333 71 3 0.794077 0.483632 0.611333 0.725231 0.704630 0.670215 0.735902 0.648667 0.667500 0.731088 0.794862 0.766905 0.470064 0.554998 0.638458 0.686429 0.623540 0.491294 0.527909 0.552242 0.899678 0.546667 0.738989 0.471154 0.813149 0.676296 0.669994 0.844500 0.502348 0.568089 0.443214 0.746286 0.195290 0.0889118 0.3712066 0.049389 0.292952 0.199052 0.611817 0.672286 0.440050 0.503333 0.490667 3 0.686747 0.697176 -0.02938241 5 0.70640 0.684727 0.0216698 0.9421865 1.3986e-01 insignificant 1 1.000000 insignificant 0.928855 0.20675438 insignificant 1 1.00000 insignificant -0.0392893 0.403060 lowCoverage 1 lowCoverage 0.686747 0.444134 0.2972388 5 0.70640 0.279974 0.4264231 1.8839e-12 9.8235e-01 hypermethylated 4.0082e-11 1.0000e+00 hypermethylated 3.0061e-06 0.9999987 hypermethylated 8.1245e-05 1 hypermethylated 0.39744489 4.1429e-04 lowCoverage 1.0902e-02 lowCoverage 0.686997 0.551929 0.1026047 3 0.74080 0.701698 0.039099 8.5366e-02 0.91883233 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.2693e-01 0.7414982 lowCoverage 1.0000e+00 1 lowCoverage 0.0194774 6.3116e-01 lowCoverage 1.0000e+00 lowCoverage 0.697176 0.444134 0.3717890 5 0.684727 0.279974 0.4047533 1.0911e-10 9.9971e-01 hypermethylated 2.9488e-09 1.0000000 hypermethylated 1.8836e-06 1.000000 hypermethylated 6.4952e-05 1 hypermethylated 0.4367342 9.3875e-05 lowCoverage 3.2036e-03 lowCoverage 0.700980 0.551929 0.1171825 3 0.775039 0.701698 0.07334129 8.4982e-02 0.99662154 lowCoverage 9.7680e-01 1.00000 lowCoverage 3.5569e-01 0.918303 lowCoverage 1.0000e+00 1 lowCoverage 0.0587668 2.6641e-01 lowCoverage 1.0000000 lowCoverage 0.445378 0.551929 -0.2689368 3 0.326636 0.701698 -0.3750614 9.8535e-01 7.8058e-05 lowCoverage 1.0000e+00 1.6969e-03 lowCoverage 1.0000e+00 8.9848e-04 lowCoverage 1.0000000 2.2831e-02 lowCoverage -0.377967 4.8669e-04 lowCoverage 0.02163694 lowCoverage chr1 34974844 34975844 1378 MIR552 ENSG00000207941 0.80743 122 5 0.53316 174 5 0.80763 74 3 0.880756 85 5 0.637707 95 5 0.79725 173 5 0.706863 87 2 0.95205 84 3 0.718296 66 5 0.825893 40 2 0.631517 169 5 0.888889 18 2 0.965278 54 4 0.753968 44 3 0.844762 60 3 0.833333 14 2 0.500000 9 1 0.788906 80 4 0.965217 53 3 0.900000 67 5 0.714286 28 3 0.863636 22 2 0.81613 57 4 0.696429 45 3 0.754849 94 2 0.77423 141 5 0.781066 92 5 0.888889 21 1 0.677823 73 3 0.674012 154 5 0.915646 140 5 0.819444 71 5 0.5537023 54 3 0.627381 75 4 0.291667 57 3 0.4846154 30 2 0.583539 88 5 0.635556 95 5 0.840927 132 5 0.638072 150 5 0.624992 118 5 0.822222 20 2 0.639556 138 4 0.929469 0.797906 0.821107 0.874976 0.886837 0.906908 0.976597 0.928670 0.939899 0.910891 0.837994 0.881440 0.950495 0.977998 0.922678 0.950495 NA 0.883930 0.982781 0.955446 0.728430 0.859369 0.852307 0.987624 0.977753 0.900030 0.877966 0.760726 0.941726 0.965537 0.960598 1.000000 0.479083 0.4523810 0.0742574 0.469916 0.534816 0.304730 0.670692 0.796280 0.933750 0.760396 0.682812 2 0.876756 0.908316 -0.02093361 5 0.67927 0.633837 0.0454295 0.7323811 1.3973e-01 insignificant 1 1.000000 insignificant 0.797336 0.61883548 insignificant 1 1.00000 insignificant 0.0055757 0.884301 lowCoverage 1 lowCoverage 0.876835 0.493734 0.3878411 3 0.74177 0.551800 0.1899666 4.2085e-15 8.8414e-01 lowCoverage 1.1690e-13 1.0000e+00 lowCoverage 1.0633e-05 0.9587021 lowCoverage 2.3115e-04 1 lowCoverage 0.25753528 2.4022e-03 lowCoverage 4.0036e-02 lowCoverage 0.877316 0.835125 0.0840363 5 0.77631 0.620315 0.155990 1.0671e-03 0.66419967 weaklyHypermeth 2.2060e-02 1.00000 weaklyHypermeth 2.0196e-04 0.9430218 weaklyHypermeth 8.0783e-03 1 weaklyHypermeth 0.0737912 2.3385e-01 lowCoverage 1.0000e+00 lowCoverage 0.909285 0.493703 0.4112131 3 0.724386 0.559200 0.1651852 1.4319e-10 8.2954e-01 lowCoverage 3.7680e-09 1.0000000 lowCoverage 1.6681e-05 0.854683 lowCoverage 4.3774e-04 1 lowCoverage 0.2519596 3.1671e-03 lowCoverage 5.5563e-02 lowCoverage 0.909285 0.835125 0.1241827 5 0.724386 0.620315 0.10407014 6.6532e-04 0.86275504 weaklyHypermeth 1.5221e-02 1.00000 weaklyHypermeth 4.8271e-04 0.955532 weaklyHypermeth 2.1867e-02 1 weaklyHypermeth 0.0682155 2.5299e-01 lowCoverage 1.0000000 lowCoverage 0.493703 0.835125 -0.3272319 3 0.559200 0.620315 -0.0611151 2.5673e-01 4.8483e-04 lowCoverage 1.0000e+00 8.2175e-03 lowCoverage 2.5751e-01 1.6151e-02 lowCoverage 1.0000000 2.1877e-01 lowCoverage -0.183744 3.0267e-02 lowCoverage 0.42037235 lowCoverage chr1 36353186 36354186 1480 COL8A2 ENSG00000171812 0.72720 411 13 0.68599 395 13 0.73344 270 13 0.800452 430 13 0.529719 127 10 0.84375 616 13 0.780499 206 13 0.82658 276 13 0.731849 171 8 0.812464 225 13 0.778606 369 13 0.584478 133 10 0.565900 213 10 0.423077 63 2 0.704049 197 11 0.924837 72 4 0.666228 52 4 0.514108 580 12 0.760074 350 13 0.837690 313 11 0.819080 207 12 0.689929 163 11 0.70052 277 12 0.735411 120 5 0.741914 303 10 0.84246 458 13 0.551424 183 8 0.539335 97 8 0.820619 283 12 0.735589 425 13 0.713596 489 13 0.810463 492 13 0.0600006 447 13 0.074144 412 13 0.114379 215 9 0.0167112 220 11 0.148889 202 13 0.142498 724 13 0.666833 348 13 0.567893 443 13 0.561454 323 11 0.517012 308 7 0.532979 357 13 0.790371 0.641527 0.733546 0.808604 0.702582 0.833251 0.789120 0.809244 0.709566 0.859230 0.752296 0.718355 0.615517 0.778601 0.731171 0.815992 0.638159 0.597860 0.753459 0.765288 0.869054 0.627632 0.758261 0.839389 0.698146 0.825261 0.790894 0.765293 0.763158 0.793540 0.681642 0.812129 0.059434 0.1021546 0.1841533 0.022180 0.167030 0.007616 0.663848 0.633432 0.660750 0.628541 0.590592 6 0.744514 0.778477 -0.02684787 13 0.66721 0.570205 0.0970081 0.9777904 4.3066e-01 insignificant 1 1.000000 insignificant 0.969348 0.41832002 insignificant 1 1.00000 insignificant -0.0134786 0.741877 insignificant 1 insignificant 0.745102 0.050450 0.6938756 13 0.67604 0.107273 0.5687691 2.5208e-106 1.0000e+00 hypermethylated 2.5208e-103 1.0000e+00 hypermethylated 7.8240e-25 1.0000000 hypermethylated 7.8240e-22 1 hypermethylated 0.61877941 4.1781e-14 hypermethylated 1.3927e-11 hypermethylated 0.745235 0.607083 0.1404546 13 0.66734 0.459938 0.207403 3.7861e-11 0.99999993 weaklyHypermeth 4.7326e-09 1.00000 weaklyHypermeth 6.6459e-07 0.9999995 weaklyHypermeth 5.5382e-05 1 weaklyHypermeth 0.1423156 2.3450e-03 weaklyHypermeth 1.1324e-01 insignificant 0.779083 0.050450 0.7227580 13 0.577595 0.107273 0.4703216 6.9043e-94 1.0000e+00 hypermethylated 6.9043e-91 1.0000000 hypermethylated 3.6486e-21 1.000000 hypermethylated 3.6486e-18 1 hypermethylated 0.6322580 6.0695e-12 hypermethylated 3.0348e-09 hypermethylated 0.779530 0.607083 0.1663480 13 0.645547 0.459938 0.18560884 2.5358e-15 0.99999998 weaklyHypermeth 4.2263e-13 1.00000 weaklyHypermeth 5.8655e-07 1.000000 weaklyHypermeth 7.3319e-05 1 weaklyHypermeth 0.1557941 1.4803e-03 weaklyHypermeth 0.0925196 weaklyHypermeth 0.049639 0.607083 -0.5479796 13 0.061070 0.459938 -0.3988682 1.0000e+00 4.7097e-48 hypomethylated 1.0000e+00 4.7097e-45 hypomethylated 1.0000e+00 1.3779e-13 hypomethylated 1.0000000 1.3779e-10 hypomethylated -0.476464 4.9541e-07 hypomethylated 0.00024770 hypomethylated chr1 36395161 36396161 1484 MAP7D1 ENSG00000116871 0.14530 454 9 0.20000 366 10 0.04000 287 11 0.087542 432 9 0.024637 199 11 0.21951 552 9 0.050302 286 11 0.05783 319 10 0.029144 260 10 0.050824 293 10 0.045455 329 11 0.060018 182 9 0.051792 137 9 0.000000 92 7 0.046463 298 10 0.038961 178 10 0.040580 59 3 0.095238 610 8 0.091260 263 9 0.110867 486 10 0.046569 198 11 0.061983 293 9 0.17194 219 10 0.037433 100 7 0.069519 884 10 0.06967 337 10 0.050167 303 11 0.064935 140 9 0.079856 272 9 0.064236 336 10 0.134058 333 11 0.075936 535 9 0.0519481 232 11 0.073990 300 9 0.176923 336 11 0.0727273 492 10 0.117949 101 7 0.090773 310 10 0.092047 442 9 0.080001 433 9 0.075214 389 9 0.094017 368 9 0.073609 366 10 0.052687 0.035564 0.026080 0.057078 0.018727 0.052316 0.038985 0.043771 0.024146 0.038724 0.032505 0.045134 0.040282 0.036188 0.039581 0.025403 0.017342 0.050806 0.060591 0.055967 0.033348 0.040414 0.073573 0.024407 0.045327 0.048401 0.038657 0.042338 0.052622 0.040750 0.036079 0.050766 0.033871 0.0511366 0.0177820 0.047419 0.045595 0.074699 0.058153 0.049452 0.050952 0.050154 0.050277 8 0.044558 0.045328 -0.00038274 10 0.13439 0.095203 0.0391864 0.6389165 9.5690e-01 insignificant 1 1.000000 insignificant 0.802538 0.90694993 insignificant 1 1.00000 insignificant -0.0029055 0.864289 insignificant 1 insignificant 0.044558 0.037853 -0.0023350 10 0.13439 0.170739 -0.0363497 7.4124e-01 7.0570e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5562e-01 0.9713457 insignificant 1.0000e+00 1 insignificant -0.02309902 3.2299e-01 insignificant 1.0000e+00 insignificant 0.043686 0.055556 -0.0086914 9 0.06498 0.076951 -0.011971 7.6532e-01 0.80457165 insignificant 1.0000e+00 1.00000 insignificant 8.4187e-01 0.7323153 insignificant 1.0000e+00 1 insignificant -0.0086917 5.2352e-01 insignificant 1.0000e+00 insignificant 0.045316 0.037832 -0.0020164 10 0.088856 0.159356 -0.0705003 9.8830e-01 9.4624e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8602e-01 0.998013 insignificant 1.0000e+00 1 insignificant -0.0201936 3.6956e-01 insignificant 1.0000e+00 insignificant 0.044659 0.055556 -0.0086731 9 0.066621 0.076951 -0.01032990 9.6225e-01 0.46590255 insignificant 1.0000e+00 1.00000 insignificant 9.5460e-01 0.554299 insignificant 1.0000e+00 1 insignificant -0.0057863 6.3290e-01 insignificant 1.0000000 insignificant 0.035207 0.055556 -0.0042365 9 0.065789 0.076951 -0.0111628 9.9973e-01 9.8527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.7976e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.014407 4.7390e-01 insignificant 1.00000000 insignificant chr1 36764160 36765160 1495 CSF3R ENSG00000119535 0.80211 294 8 0.70769 218 11 0.62462 153 11 0.849172 252 11 0.859479 102 11 0.84614 293 11 0.738955 139 8 0.65413 141 10 0.661830 105 10 0.750170 100 6 0.718158 318 11 0.652020 59 6 0.804469 124 11 0.916226 50 7 0.763174 150 9 0.796097 53 5 0.880645 74 5 0.861088 200 8 0.793183 162 10 0.727102 265 8 0.890110 58 5 0.840890 99 8 0.78614 149 8 0.746759 66 4 0.864822 95 7 0.76416 273 11 0.721696 116 7 0.877706 32 2 0.887098 140 7 0.791423 241 11 0.764915 204 9 0.808028 369 11 0.7844873 165 9 0.753980 126 8 0.671360 196 11 0.8213542 72 6 0.670340 120 9 0.590173 183 11 0.791047 235 11 0.783506 253 11 0.800842 245 11 0.901098 186 8 0.788670 251 11 0.800398 0.741794 0.719334 0.858498 0.856145 0.842244 0.787904 0.702363 0.741834 0.807780 0.778896 0.832140 0.808183 0.883865 0.820808 0.828606 0.873330 0.885142 0.808732 0.820025 0.851633 0.787136 0.874851 0.811662 0.890182 0.766620 0.695672 0.852363 0.863978 0.815707 0.791114 0.819469 0.777784 0.6909346 0.6762477 0.836531 0.653349 0.723227 0.857021 0.789568 0.820574 0.879294 0.815049 4 0.795755 0.814875 -0.01870089 11 0.76791 0.821416 -0.0535093 0.9004056 1.0422e-01 insignificant 1 1.000000 insignificant 0.979149 0.06953230 insignificant 1 1.00000 insignificant -0.0416565 0.110891 insignificant 1 insignificant 0.795755 0.716937 0.0757820 11 0.76791 0.619560 0.1483467 1.4820e-05 9.9773e-01 weaklyHypermeth 1.6466e-04 1.0000e+00 weaklyHypermeth 1.3675e-03 0.9876154 weaklyHypermeth 1.7532e-02 1 weaklyHypermeth 0.05504066 2.0487e-01 insignificant 1.0000e+00 insignificant 0.795755 0.835897 -0.0290406 11 0.76791 0.779135 -0.011229 9.7935e-01 0.21246139 insignificant 1.0000e+00 1.00000 insignificant 9.9394e-01 0.2540247 insignificant 1.0000e+00 1 insignificant -0.0427095 1.7147e-01 insignificant 1.0000e+00 insignificant 0.814875 0.716937 0.0954594 11 0.821416 0.619560 0.2018560 7.3378e-06 9.9999e-01 weaklyHypermeth 9.9160e-05 1.0000000 weaklyHypermeth 5.3895e-05 0.999958 weaklyHypermeth 1.0779e-03 1 weaklyHypermeth 0.0966972 4.0615e-02 weaklyHypermeth 4.2307e-01 insignificant 0.814875 0.835897 -0.0088237 11 0.821416 0.779135 0.04228043 9.3701e-01 0.72501504 insignificant 1.0000e+00 1.00000 insignificant 8.6663e-01 0.905951 insignificant 1.0000e+00 1 insignificant -0.0010530 9.7072e-01 insignificant 1.0000000 insignificant 0.716937 0.835897 -0.1052011 11 0.619560 0.779135 -0.1595756 1.0000e+00 5.4859e-05 weaklyHypometh 1.0000e+00 1.2191e-03 weaklyHypometh 9.9987e-01 3.1390e-03 weaklyHypometh 1.0000000 5.5071e-02 weaklyHypometh -0.097750 4.6114e-02 weaklyHypometh 0.56587813 insignificant chr1 37275999 37276999 1571 GRIK3 ENSG00000163873 0.13980 347 7 0.12624 240 7 0.33264 209 7 0.106081 418 7 0.106494 127 7 0.17384 526 7 0.134200 258 7 0.15334 275 7 0.220616 391 7 0.126297 371 7 0.156671 223 7 0.329063 184 7 0.116685 368 7 0.099416 129 6 0.116936 359 7 0.289868 130 7 0.247984 160 7 0.112182 492 7 0.088446 170 7 0.037469 347 7 0.472094 93 7 0.040111 327 7 0.13847 269 7 0.137402 165 7 0.135387 133 7 0.11141 455 7 0.114745 210 7 0.096756 163 6 0.113718 263 7 0.098856 424 7 0.037857 318 7 0.271218 331 7 0.0539037 216 7 0.022637 201 7 0.000000 320 5 0.0357143 67 5 0.077974 166 7 0.101129 289 7 0.069457 586 7 0.115082 445 7 0.080037 449 7 0.230976 513 7 0.103584 451 7 0.163433 0.134854 0.309345 0.114834 0.091210 0.178347 0.131239 0.181522 0.225174 0.125144 0.167399 0.337421 0.116010 0.113787 0.116894 0.311599 0.224559 0.117015 0.111739 0.050539 0.479929 0.038607 0.144383 0.170026 0.126307 0.111975 0.124521 0.106668 0.118192 0.103649 0.043916 0.304062 0.058445 0.0215334 0.0255738 0.023554 0.089012 0.074927 0.065727 0.107690 0.079056 0.222913 0.097911 7 0.167715 0.142812 0.02091958 7 0.15318 0.129711 0.0234665 0.1050050 9.8520e-01 insignificant 1 1.000000 insignificant 0.143909 0.99260422 insignificant 1 1.00000 insignificant 0.0133779 0.733104 insignificant 1 insignificant 0.167715 0.041303 0.1196760 7 0.15318 0.055759 0.0974185 2.1094e-09 9.9999e-01 weaklyHypermeth 3.6369e-08 1.0000e+00 weaklyHypermeth 6.2633e-08 0.9999999 weaklyHypermeth 2.8469e-06 1 weaklyHypermeth 0.11215349 1.3623e-04 weaklyHypermeth 4.3945e-03 weaklyHypermeth 0.167715 0.122340 0.0470680 7 0.15318 0.119042 0.034135 7.7128e-02 0.97074911 insignificant 9.7630e-01 1.00000 insignificant 3.1806e-02 0.9199132 weaklyHypermeth 5.5800e-01 1 insignificant 0.0408860 2.6806e-01 insignificant 1.0000e+00 insignificant 0.142812 0.041303 0.0997042 7 0.129711 0.055759 0.0739520 1.3029e-03 9.9810e-01 weaklyHypermeth 1.2900e-02 1.0000000 weaklyHypermeth 2.4090e-05 0.999996 weaklyHypermeth 5.6024e-04 1 weaklyHypermeth 0.0987755 1.8514e-02 weaklyHypermeth 2.2046e-01 insignificant 0.142812 0.122340 0.0242226 7 0.129711 0.119042 0.01066886 5.7189e-01 0.57347948 insignificant 1.0000e+00 1.00000 insignificant 6.2921e-01 0.272667 insignificant 1.0000e+00 1 insignificant 0.0275080 5.4852e-01 insignificant 1.0000000 insignificant 0.041303 0.122340 -0.0743360 7 0.055759 0.119042 -0.0632831 9.9972e-01 8.2992e-05 weaklyHypometh 1.0000e+00 1.7658e-03 weaklyHypometh 1.0000e+00 1.0087e-04 weaklyHypometh 1.0000000 4.2029e-03 weaklyHypometh -0.071268 7.0988e-02 insignificant 0.79990166 insignificant chr1 37638737 37639737 1618 ENSG00000210044 0.77367 329 7 0.74912 414 7 0.64762 39 7 0.833017 219 7 0.721088 27 3 0.82489 419 7 0.859524 48 6 0.81075 156 7 0.772109 35 3 0.923469 37 3 0.886867 430 7 1.000000 4 0 0.845352 133 7 0.954997 64 7 0.853153 70 7 0.000000 8 0 NA 0 0 0.564050 166 7 0.938444 181 7 0.896076 334 7 0.766234 37 3 0.625000 8 0 0.80371 169 7 0.845238 101 7 0.666667 3 0 0.91474 408 7 0.686242 104 7 0.821429 27 0 0.866453 217 7 0.934730 571 7 0.814007 534 7 0.890466 298 7 0.0781640 258 7 0.521544 251 7 0.000000 200 3 NA 0 0 0.134527 226 7 0.025107 587 7 0.166708 431 7 0.586969 349 7 0.705880 166 7 0.477789 128 7 0.361635 241 7 0.764181 0.776368 0.585000 0.749468 0.470238 0.803240 0.834167 0.784319 0.709524 0.908929 0.870838 0.962436 0.825913 0.950733 0.782303 0.612498 NA 0.532455 0.916086 0.885046 0.768182 0.775210 0.817431 0.929167 0.713704 0.889551 0.699458 0.700000 0.876663 0.911896 0.828335 0.857369 0.080994 0.3619503 0.0472922 NA 0.114266 0.028512 0.143432 0.598523 0.706623 0.392226 0.360921 0 0.805975 0.860315 -0.05402656 7 0.82060 0.861386 -0.0407841 0.9929343 1.0866e-02 weaklyHypometh 1 0.792390 insignificant 0.878135 0.13926736 insignificant 1 1.00000 insignificant -0.0211102 0.716381 lowCoverage 1 lowCoverage 0.805975 0.111038 0.6935038 7 0.82060 0.141979 0.6786230 4.3782e-47 1.0000e+00 hypermethylated 1.0945e-44 1.0000e+00 hypermethylated 3.2021e-12 1.0000000 hypermethylated 4.5744e-10 1 hypermethylated 0.62993124 8.7649e-04 hypermethylated 1.9478e-02 hypermethylated 0.805975 0.407605 0.3986292 7 0.82060 0.414045 0.406557 3.6537e-25 1.00000000 hypermethylated 3.6537e-22 1.00000 hypermethylated 1.8422e-10 1.0000000 hypermethylated 6.1408e-08 1 hypermethylated 0.3220038 2.0187e-02 weaklyHypermeth 4.4861e-01 insignificant 0.860315 0.111038 0.7416664 7 0.861386 0.141979 0.7194071 3.9945e-40 1.0000e+00 hypermethylated 1.3315e-37 1.0000000 hypermethylated 8.4097e-11 1.000000 hypermethylated 1.4016e-08 1 hypermethylated 0.6510415 1.5196e-03 lowCoverage 3.1659e-02 lowCoverage 0.860315 0.407605 0.4513167 7 0.861386 0.414045 0.44734111 1.1258e-23 1.00000000 hypermethylated 1.1258e-20 1.00000 hypermethylated 2.2191e-09 1.000000 hypermethylated 5.5478e-07 1 hypermethylated 0.3431140 1.8027e-02 lowCoverage 0.5186611 lowCoverage 0.111038 0.407605 -0.2965817 7 0.141979 0.414045 -0.2720660 1.0000e+00 1.2527e-04 hypomethylated 1.0000e+00 2.4563e-03 hypomethylated 1.0000e+00 8.5172e-05 hypomethylated 1.0000000 4.0874e-03 hypomethylated -0.307927 4.9388e-02 weaklyHypometh 0.58795749 insignificant chr1 37837808 37838808 1632 GNL2 ENSG00000134697 0.89034 144 5 0.75968 147 5 0.79410 108 3 0.831349 74 5 0.820076 50 5 0.80061 189 6 0.671278 57 3 0.77472 141 6 0.769792 90 3 0.862811 95 5 0.867929 164 6 0.848148 35 4 0.810210 153 6 0.600000 11 2 0.808078 94 5 0.733333 31 3 0.391317 43 3 0.671064 69 5 0.861231 140 5 0.829930 144 6 0.676768 42 3 0.758730 32 5 0.84738 116 5 0.698718 42 3 0.927273 27 2 0.80142 149 5 0.879630 54 5 0.473077 24 2 0.776652 152 5 0.805355 149 6 0.784090 130 6 0.795278 249 6 0.7214136 131 6 0.840140 84 5 0.855392 135 4 0.5555556 7 0 0.815934 57 5 0.616397 220 6 0.596421 127 5 0.524229 166 5 0.710344 89 5 0.743353 122 5 0.839177 96 5 0.865661 0.745081 0.732220 0.872053 0.795124 0.835025 0.635254 0.789363 0.775667 0.935170 0.873008 0.850701 0.832280 0.830815 0.817919 0.766990 0.475440 0.585827 0.866333 0.849756 0.734334 0.710217 0.895430 0.864451 0.947043 0.829695 0.877832 0.556945 0.829283 0.844110 0.875419 0.787709 0.707855 0.8599973 0.7709788 0.634210 0.840597 0.507856 0.570863 0.584443 0.636529 0.759099 0.914513 1 0.812532 0.834477 -0.02212087 5 0.79687 0.795479 0.0013933 0.5157621 2.4557e-01 insignificant 1 1.000000 insignificant 0.491705 0.19730943 insignificant 1 1.00000 insignificant 0.0011019 0.979450 lowCoverage 1 lowCoverage 0.812532 0.692429 0.1422663 5 0.79687 0.725902 0.0709703 2.1733e-03 5.9947e-01 weaklyHypermeth 1.9938e-02 1.0000e+00 weaklyHypermeth 4.1132e-01 0.5994913 insignificant 1.0000e+00 1 insignificant 0.03566075 5.5190e-01 lowCoverage 1.0000e+00 lowCoverage 0.812532 0.663333 0.1470020 5 0.79687 0.660126 0.136746 6.2174e-05 0.97932518 weaklyHypermeth 1.7271e-03 1.00000 weaklyHypermeth 4.5852e-02 0.9342475 weaklyHypermeth 7.8174e-01 1 insignificant 0.0870945 2.0553e-01 lowCoverage 1.0000e+00 lowCoverage 0.834477 0.692429 0.1600727 5 0.795479 0.725902 0.0695770 1.3658e-03 3.3026e-01 weaklyHypermeth 1.3093e-02 1.0000000 weaklyHypermeth 4.3576e-02 0.516194 weaklyHypermeth 3.7565e-01 1 insignificant 0.0345588 5.8516e-01 lowCoverage 1.0000e+00 lowCoverage 0.834477 0.663333 0.1756542 5 0.795479 0.660126 0.13535309 3.2407e-05 0.98317302 weaklyHypermeth 1.0496e-03 1.00000 weaklyHypermeth 1.2318e-02 0.980077 weaklyHypermeth 2.3241e-01 1 insignificant 0.0859926 2.2534e-01 lowCoverage 1.0000000 lowCoverage 0.692429 0.663333 0.0147487 5 0.725902 0.660126 0.0657760 1.5264e-01 6.7573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5841e-01 8.2429e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.051434 5.1320e-01 lowCoverage 1.00000000 lowCoverage chr1 37868266 37869266 1639 GNL2 ENSG00000134697 0.38302 231 9 0.30859 256 9 0.36736 250 9 0.218104 262 9 0.266318 111 7 0.19546 446 10 0.278222 193 9 0.32893 248 9 0.227179 195 8 0.294826 285 9 0.496210 296 11 0.414638 96 6 0.095865 362 9 0.229821 124 5 0.101500 402 9 0.363382 93 8 0.181879 113 4 0.250938 257 8 0.245280 242 9 0.107901 366 10 0.554053 130 7 0.244186 216 10 0.31634 204 9 0.368110 248 9 0.331497 157 8 0.23125 390 11 0.253640 235 10 0.252307 158 9 0.328069 238 10 0.142160 433 9 0.253674 405 9 0.586887 291 9 0.4176137 228 10 0.348438 182 9 0.464724 194 6 0.3645507 174 9 0.523709 192 10 0.506363 221 10 0.071345 406 9 0.165722 374 9 0.132263 254 9 0.080487 293 9 0.114157 360 9 0.401263 0.315402 0.394019 0.241640 0.359739 0.200513 0.312126 0.278857 0.299067 0.311856 0.476455 0.470117 0.073198 0.322987 0.148479 0.472755 0.141500 0.202612 0.246307 0.076979 0.475945 0.079944 0.311979 0.353022 0.249289 0.169813 0.277510 0.321744 0.180270 0.087915 0.159690 0.614357 0.332187 0.2809461 0.6381575 0.233013 0.515666 0.375739 0.049946 0.037554 0.046350 0.083772 0.056257 8 0.246686 0.250242 0.00329730 9 0.25552 0.363202 -0.1076839 0.8957730 6.1879e-01 insignificant 1 1.000000 insignificant 0.881585 0.27565606 insignificant 1 1.00000 insignificant -0.0540772 0.238741 insignificant 1 insignificant 0.246788 0.386230 -0.1451833 9 0.27875 0.487277 -0.2085306 9.4993e-01 1.3866e-09 weaklyHypometh 1.0000e+00 6.9329e-07 weaklyHypometh 9.0952e-01 0.0065843 weaklyHypometh 1.0000e+00 1 insignificant -0.16979542 7.6292e-04 weaklyHypometh 1.8509e-02 weaklyHypometh 0.246788 0.053942 0.1895046 9 0.27875 0.123581 0.155165 2.3080e-09 0.99999393 weaklyHypermeth 2.3080e-07 1.00000 weaklyHypermeth 1.5776e-10 0.9998939 weaklyHypermeth 6.1408e-08 1 weaklyHypermeth 0.1549760 4.1749e-05 weaklyHypermeth 8.3499e-03 weaklyHypermeth 0.249758 0.386230 -0.1267426 10 0.305311 0.487277 -0.1819664 9.6107e-01 2.0667e-06 weaklyHypometh 1.0000e+00 0.0010333 weaklyHypometh 8.4596e-01 0.047997 weaklyHypometh 1.0000e+00 1 insignificant -0.1157182 2.8602e-02 weaklyHypometh 3.1498e-01 insignificant 0.249758 0.053942 0.1883619 9 0.305311 0.123581 0.18172947 2.5157e-07 0.99999971 weaklyHypermeth 1.6473e-05 1.00000 weaklyHypermeth 2.9268e-10 1.000000 weaklyHypermeth 2.9268e-07 1 weaklyHypermeth 0.2090532 1.6465e-04 hypermethylated 0.0167647 hypermethylated 0.386230 0.053942 0.3238433 9 0.487277 0.123581 0.3636958 1.6875e-08 1.0000e+00 hypermethylated 5.6251e-06 1.0000e+00 hypermethylated 1.9413e-06 1.0000e+00 hypermethylated 0.0019413 1.0000e+00 hypermethylated 0.324771 1.5153e-05 hypermethylated 0.00216475 hypermethylated chr1 37894817 37895817 1641 RSPO1 ENSG00000169218 0.73245 160 6 0.56492 133 8 0.59333 131 8 0.894551 170 7 0.578388 114 8 0.83997 290 8 0.732390 89 8 0.78932 112 7 0.538671 60 7 0.705303 70 5 0.602257 281 8 0.739530 56 8 0.766791 91 5 0.764773 62 5 0.807738 71 6 0.571429 25 1 0.500000 7 0 0.705712 199 7 0.637301 127 7 0.865162 179 7 0.810085 77 5 0.907029 64 5 0.73247 122 7 0.608668 79 6 0.876190 76 5 0.81847 218 8 0.764374 73 7 0.716667 43 2 0.833191 82 6 0.850762 135 8 0.665889 158 7 0.833190 283 8 0.4317059 148 8 0.290275 154 7 0.555959 240 7 0.3928571 17 1 0.475916 162 8 0.232402 257 8 0.803517 159 7 0.841588 154 8 0.581547 133 3 0.889833 147 3 0.694207 140 8 0.846942 0.674267 0.706765 0.880920 0.857812 0.847251 0.790359 0.806832 0.616140 0.802094 0.793816 0.630958 0.829161 0.813145 0.826010 0.457728 0.841888 0.811889 0.730143 0.899250 0.888238 0.927103 0.828781 0.823895 0.851362 0.863298 0.815260 0.922478 0.896838 0.840664 0.817580 0.842139 0.623900 0.5269465 0.8184228 0.483763 0.717744 0.289154 0.873758 0.874543 0.856491 0.886018 0.841379 1 0.796121 0.829078 -0.04259323 8 0.66100 0.690785 -0.0297803 0.9316255 7.8788e-03 weaklyHypometh 1 0.716251 insignificant 0.986873 0.00050146 weaklyHypometh 1 0.10029 insignificant -0.0882496 0.022514 weaklyHypometh 1 insignificant 0.796442 0.452965 0.2956249 8 0.66044 0.352336 0.3081025 3.3560e-28 9.9890e-01 hypermethylated 1.9741e-26 1.0000e+00 hypermethylated 1.1588e-07 0.9457877 hypermethylated 4.8284e-06 1 hypermethylated 0.29998023 6.0044e-04 hypermethylated 1.5396e-02 hypermethylated 0.796442 0.848568 -0.0575279 7 0.66044 0.688382 -0.027944 9.3711e-01 0.03136367 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9001e-01 0.0182331 weaklyHypometh 1.0000e+00 1 insignificant -0.0656392 3.2595e-01 insignificant 1.0000e+00 insignificant 0.830364 0.452965 0.3479042 8 0.702720 0.352336 0.3503846 7.8264e-22 9.9998e-01 hypermethylated 3.9132e-20 1.0000000 hypermethylated 2.2965e-09 1.000000 hypermethylated 2.0877e-07 1 hypermethylated 0.3882298 1.1478e-04 hypermethylated 3.5868e-03 hypermethylated 0.830364 0.848568 -0.0147646 7 0.702720 0.688382 0.01433793 7.3962e-01 0.17394213 insignificant 1.0000e+00 1.00000 insignificant 7.8895e-01 0.266963 insignificant 1.0000e+00 1 insignificant 0.0226104 7.2462e-01 insignificant 1.0000000 insignificant 0.452965 0.848568 -0.3400280 7 0.352336 0.688382 -0.3360466 9.9961e-01 4.7559e-13 hypomethylated 1.0000e+00 4.7559e-11 hypomethylated 9.9982e-01 1.5767e-05 hypomethylated 1.0000000 1.3139e-03 hypomethylated -0.365619 9.3395e-04 hypomethylated 0.03335537 hypomethylated chr1 37968119 37969119 1649 CDCA8 ENSG00000134690 0.61989 161 5 0.62416 81 5 0.78770 60 5 0.713970 91 5 0.781429 38 4 0.61166 190 6 0.746350 112 5 0.57738 80 5 0.638649 63 5 0.527146 82 5 0.638658 141 5 0.731818 59 5 0.625595 83 5 0.500000 13 2 0.594065 96 5 0.566919 54 5 0.604314 89 5 0.701880 105 5 0.567253 118 5 0.586464 165 5 0.744108 49 3 0.705952 51 5 0.65100 85 5 0.632653 34 2 0.688312 39 4 0.61336 131 5 0.809524 41 2 0.738817 27 2 0.491385 47 4 0.496344 108 5 0.570847 104 5 0.675920 215 5 0.5712834 92 6 0.564615 59 5 0.471206 124 5 0.5315476 45 5 0.420833 46 4 0.574690 145 6 0.762236 129 5 0.755473 137 5 0.772509 126 5 0.731736 136 5 0.687113 94 5 0.792854 0.739902 0.805891 0.749067 0.881818 0.742781 0.775562 0.838582 0.747262 0.728429 0.806080 0.792145 0.798972 NA 0.715650 0.731553 0.694258 0.831156 0.755424 0.773116 0.800964 0.756494 0.846931 0.750928 0.927981 0.753637 0.748228 0.765709 0.717233 0.612614 0.661203 0.724670 0.636502 0.6417582 0.5822838 0.646591 0.614123 0.650804 0.774009 0.835258 0.801947 0.783944 0.801099 2 0.719830 0.701509 0.03281606 5 0.62565 0.603594 0.0220568 0.3451238 9.1801e-01 insignificant 1 1.000000 insignificant 0.542125 0.41210716 insignificant 1 1.00000 insignificant -0.0142537 0.674569 lowCoverage 1 lowCoverage 0.719830 0.610568 0.1303772 5 0.62565 0.546578 0.0790722 6.1083e-08 9.9642e-01 weaklyHypermeth 9.1168e-07 1.0000e+00 weaklyHypermeth 2.0761e-05 0.9979957 weaklyHypermeth 4.2369e-04 1 weaklyHypermeth 0.11490202 4.1496e-03 lowCoverage 6.4838e-02 lowCoverage 0.719830 0.741158 -0.0368549 5 0.62565 0.656711 -0.031061 9.3204e-01 0.11962112 insignificant 1.0000e+00 1.00000 insignificant 9.1829e-01 0.1228503 insignificant 1.0000e+00 1 insignificant -0.1045487 4.1150e-04 lowCoverage 2.5718e-02 lowCoverage 0.701509 0.610568 0.0966692 5 0.603594 0.546578 0.0570154 3.2571e-04 9.9488e-01 weaklyHypermeth 3.5022e-03 1.0000000 weaklyHypermeth 9.2358e-04 0.999169 weaklyHypermeth 1.2152e-02 1 weaklyHypermeth 0.1291557 4.1969e-03 lowCoverage 6.6843e-02 lowCoverage 0.701509 0.741158 -0.0681012 5 0.603594 0.656711 -0.05311764 9.8642e-01 0.09671856 insignificant 1.0000e+00 1.00000 insignificant 9.1290e-01 0.386154 insignificant 1.0000e+00 1 insignificant -0.0902950 1.2842e-02 lowCoverage 0.4740345 lowCoverage 0.610568 0.741158 -0.1655045 5 0.546578 0.656711 -0.1101331 9.9245e-01 1.0339e-06 weaklyHypometh 1.0000e+00 3.0410e-05 weaklyHypometh 9.9945e-01 4.7636e-05 weaklyHypometh 1.0000000 3.3783e-03 weaklyHypometh -0.219451 8.6935e-05 hypomethylated 0.00724457 hypomethylated chr1 38272412 38273412 1663 UTP11L ENSG00000183520 0.86025 185 6 0.91332 50 6 0.92436 63 6 0.954239 191 6 0.791667 23 0 0.93717 257 6 0.981481 47 5 0.83948 89 6 0.941725 83 6 0.946023 102 6 0.935159 144 6 0.898990 62 6 0.961032 223 6 0.982456 113 6 0.932968 121 6 0.857143 30 5 0.813889 21 1 0.932561 250 6 0.957143 89 6 0.957681 128 6 0.947811 56 6 0.957456 106 6 0.96124 135 6 1.000000 56 6 0.975000 93 6 0.97440 120 6 0.893067 100 6 0.910000 21 1 0.935564 92 6 0.977273 127 6 0.907143 91 6 0.932293 218 6 0.8999378 106 6 0.837607 85 6 0.788961 219 6 0.9040816 42 6 0.746154 71 6 0.912544 131 6 0.886775 119 6 0.927059 102 6 0.908705 184 6 0.898116 127 6 0.807615 142 6 0.859331 0.916345 0.926554 0.951693 0.786723 0.939316 0.983679 0.896002 0.944728 0.944658 0.936441 0.904811 0.961461 0.982159 0.932060 0.853107 0.822787 0.930005 0.952919 0.959620 0.951949 0.962504 0.961663 1.000000 0.976460 0.974617 0.892187 0.921573 0.930469 0.973035 0.899919 0.934401 0.895193 0.8299290 0.9056240 0.876352 0.864407 0.900628 0.881344 0.926718 0.908509 0.897224 0.944852 6 0.930304 0.948148 -0.01976389 6 0.93150 0.948662 -0.0171664 0.9320198 8.5569e-02 insignificant 1 1.000000 insignificant 0.980222 0.01886101 weaklyHypometh 1 0.82004 insignificant -0.0316672 0.049765 weaklyHypometh 1 insignificant 0.929987 0.891437 0.0366091 6 0.90557 0.817184 0.0883836 4.1094e-05 4.3217e-01 weaklyHypermeth 4.2806e-04 1.0000e+00 weaklyHypermeth 1.1774e-02 0.4493061 weaklyHypermeth 1.1893e-01 1 insignificant 0.06772273 6.3986e-02 insignificant 5.7645e-01 insignificant 0.929987 0.909496 0.0238603 6 0.90557 0.779509 0.126058 5.4952e-02 0.98186255 insignificant 7.3270e-01 1.00000 insignificant 1.7557e-01 0.9691233 insignificant 1.0000e+00 1 insignificant 0.0302830 2.4634e-01 insignificant 1.0000e+00 insignificant 0.948148 0.894009 0.0535835 6 0.948662 0.897825 0.0508362 1.3747e-03 7.0955e-01 weaklyHypermeth 1.3093e-02 1.0000000 weaklyHypermeth 5.5296e-03 0.870708 weaklyHypermeth 6.0765e-02 1 weaklyHypermeth 0.0993899 1.5170e-02 weaklyHypermeth 1.8963e-01 insignificant 0.948148 0.910847 0.0422775 6 0.948662 0.909427 0.03923421 8.2754e-03 0.98083118 weaklyHypermeth 1.2731e-01 1.00000 insignificant 1.3660e-02 0.983523 weaklyHypermeth 2.3966e-01 1 insignificant 0.0619502 3.5469e-02 weaklyHypermeth 0.7238666 insignificant 0.891437 0.909496 -0.0132974 6 0.817184 0.779509 0.0376745 7.3430e-02 3.4888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8254e-01 2.0302e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.037440 3.1341e-01 insignificant 1.00000000 insignificant chr1 38272736 38273736 1664 UTP11L ENSG00000183520 0.86025 185 6 0.91332 50 6 0.92436 63 6 0.954239 191 6 0.791667 23 0 0.93717 257 6 0.981481 47 5 0.83948 89 6 0.941725 83 6 0.946023 102 6 0.935159 144 6 0.898990 62 6 0.961032 223 6 0.982456 113 6 0.932968 121 6 0.857143 30 5 0.813889 21 1 0.932561 250 6 0.957143 89 6 0.957681 128 6 0.947811 56 6 0.957456 106 6 0.96124 135 6 1.000000 56 6 0.975000 93 6 0.97440 120 6 0.893067 100 6 0.910000 21 1 0.935564 92 6 0.977273 127 6 0.907143 91 6 0.932293 218 6 0.8999378 106 6 0.837607 85 6 0.788961 219 6 0.9040816 42 6 0.746154 71 6 0.912544 131 6 0.886775 119 6 0.927059 102 6 0.908705 184 6 0.898116 127 6 0.807615 142 6 0.859331 0.916345 0.926554 0.951693 0.786723 0.939316 0.983679 0.896002 0.944728 0.944658 0.936441 0.904811 0.961461 0.982159 0.932060 0.853107 0.822787 0.930005 0.952919 0.959620 0.951949 0.962504 0.961663 1.000000 0.976460 0.974617 0.892187 0.921573 0.930469 0.973035 0.899919 0.934401 0.895193 0.8299290 0.9056240 0.876352 0.864407 0.900628 0.881344 0.926718 0.908509 0.897224 0.944852 6 0.930304 0.948148 -0.01976389 6 0.93150 0.948662 -0.0171664 0.9320198 8.5569e-02 insignificant 1 1.000000 insignificant 0.980222 0.01886101 weaklyHypometh 1 0.82004 insignificant -0.0316672 0.049765 weaklyHypometh 1 insignificant 0.929987 0.891437 0.0366091 6 0.90557 0.817184 0.0883836 4.1094e-05 4.3217e-01 weaklyHypermeth 4.2806e-04 1.0000e+00 weaklyHypermeth 1.1774e-02 0.4493061 weaklyHypermeth 1.1893e-01 1 insignificant 0.06772273 6.3986e-02 insignificant 5.7645e-01 insignificant 0.929987 0.909496 0.0238603 6 0.90557 0.779509 0.126058 5.4952e-02 0.98186255 insignificant 7.3270e-01 1.00000 insignificant 1.7557e-01 0.9691233 insignificant 1.0000e+00 1 insignificant 0.0302830 2.4634e-01 insignificant 1.0000e+00 insignificant 0.948148 0.894009 0.0535835 6 0.948662 0.897825 0.0508362 1.3747e-03 7.0955e-01 weaklyHypermeth 1.3093e-02 1.0000000 weaklyHypermeth 5.5296e-03 0.870708 weaklyHypermeth 6.0765e-02 1 weaklyHypermeth 0.0993899 1.5170e-02 weaklyHypermeth 1.8963e-01 insignificant 0.948148 0.910847 0.0422775 6 0.948662 0.909427 0.03923421 8.2754e-03 0.98083118 weaklyHypermeth 1.2731e-01 1.00000 insignificant 1.3660e-02 0.983523 weaklyHypermeth 2.3966e-01 1 insignificant 0.0619502 3.5469e-02 weaklyHypermeth 0.7238666 insignificant 0.891437 0.909496 -0.0132974 6 0.817184 0.779509 0.0376745 7.3430e-02 3.4888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8254e-01 2.0302e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.037440 3.1341e-01 insignificant 1.00000000 insignificant chr1 38272942 38273942 1665 UTP11L ENSG00000183520 0.86025 185 6 0.91332 50 6 0.92436 63 6 0.954239 191 6 0.791667 23 0 0.93717 257 6 0.981481 47 5 0.83948 89 6 0.941725 83 6 0.946023 102 6 0.935159 144 6 0.898990 62 6 0.961032 223 6 0.982456 113 6 0.932968 121 6 0.857143 30 5 0.813889 21 1 0.932561 250 6 0.957143 89 6 0.957681 128 6 0.947811 56 6 0.957456 106 6 0.96124 135 6 1.000000 56 6 0.975000 93 6 0.97440 120 6 0.893067 100 6 0.910000 21 1 0.935564 92 6 0.977273 127 6 0.907143 91 6 0.932293 218 6 0.8999378 106 6 0.837607 85 6 0.788961 219 6 0.9040816 42 6 0.746154 71 6 0.912544 131 6 0.886775 119 6 0.927059 102 6 0.908705 184 6 0.898116 127 6 0.807615 142 6 0.859331 0.916345 0.926554 0.951693 0.786723 0.939316 0.983679 0.896002 0.944728 0.944658 0.936441 0.904811 0.961461 0.982159 0.932060 0.853107 0.822787 0.930005 0.952919 0.959620 0.951949 0.962504 0.961663 1.000000 0.976460 0.974617 0.892187 0.921573 0.930469 0.973035 0.899919 0.934401 0.895193 0.8299290 0.9056240 0.876352 0.864407 0.900628 0.881344 0.926718 0.908509 0.897224 0.944852 6 0.930304 0.948148 -0.01976389 6 0.93150 0.948662 -0.0171664 0.9320198 8.5569e-02 insignificant 1 1.000000 insignificant 0.980222 0.01886101 weaklyHypometh 1 0.82004 insignificant -0.0316672 0.049765 weaklyHypometh 1 insignificant 0.929987 0.891437 0.0366091 6 0.90557 0.817184 0.0883836 4.1094e-05 4.3217e-01 weaklyHypermeth 4.2806e-04 1.0000e+00 weaklyHypermeth 1.1774e-02 0.4493061 weaklyHypermeth 1.1893e-01 1 insignificant 0.06772273 6.3986e-02 insignificant 5.7645e-01 insignificant 0.929987 0.909496 0.0238603 6 0.90557 0.779509 0.126058 5.4952e-02 0.98186255 insignificant 7.3270e-01 1.00000 insignificant 1.7557e-01 0.9691233 insignificant 1.0000e+00 1 insignificant 0.0302830 2.4634e-01 insignificant 1.0000e+00 insignificant 0.948148 0.894009 0.0535835 6 0.948662 0.897825 0.0508362 1.3747e-03 7.0955e-01 weaklyHypermeth 1.3093e-02 1.0000000 weaklyHypermeth 5.5296e-03 0.870708 weaklyHypermeth 6.0765e-02 1 weaklyHypermeth 0.0993899 1.5170e-02 weaklyHypermeth 1.8963e-01 insignificant 0.948148 0.910847 0.0422775 6 0.948662 0.909427 0.03923421 8.2754e-03 0.98083118 weaklyHypermeth 1.2731e-01 1.00000 insignificant 1.3660e-02 0.983523 weaklyHypermeth 2.3966e-01 1 insignificant 0.0619502 3.5469e-02 weaklyHypermeth 0.7238666 insignificant 0.891437 0.909496 -0.0132974 6 0.817184 0.779509 0.0376745 7.3430e-02 3.4888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8254e-01 2.0302e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.037440 3.1341e-01 insignificant 1.00000000 insignificant chr1 38764859 38765859 1744 ENSG00000200796 0.67964 221 7 0.75581 298 7 0.52771 112 3 0.803680 218 7 0.649198 100 4 0.73705 352 7 0.477543 107 3 0.76807 117 7 0.800313 113 6 0.714399 80 6 0.703883 250 7 0.649068 62 4 0.650261 117 5 0.686218 48 3 0.647487 100 3 0.808081 34 3 0.342903 43 2 0.726367 239 7 0.761211 154 6 0.815035 309 7 0.471948 61 4 0.382564 28 2 0.60227 224 7 0.566239 80 7 0.867788 60 3 0.68929 197 8 0.737834 66 3 0.876417 52 3 0.689575 183 8 0.699726 270 7 0.828427 223 6 0.709943 317 7 0.2992485 245 8 0.308888 112 3 0.276786 155 6 0.3611111 25 2 0.287260 151 6 0.498897 211 7 0.671098 327 6 0.674411 287 6 0.624062 186 6 0.735924 286 7 0.792975 265 6 0.757733 0.655122 0.557022 0.753243 0.639384 0.653175 0.581295 0.601117 0.619783 0.688282 0.652869 0.735258 0.708691 0.814434 0.602171 0.608734 0.589474 0.774907 0.741505 0.719565 0.569753 0.488778 0.685160 0.704947 0.793778 0.664885 0.708565 0.688189 0.699759 0.694526 0.674162 0.651060 0.532056 0.5332949 0.6943277 0.575466 0.556514 0.631927 0.765220 0.742951 0.714947 0.804799 0.734002 3 0.728367 0.730835 0.00405770 6 0.69198 0.684531 0.0074487 0.6384050 7.6989e-01 insignificant 1 1.000000 insignificant 0.630358 0.68325463 insignificant 1 1.00000 insignificant 0.0083623 0.871969 insignificant 1 insignificant 0.728367 0.467186 0.2538260 6 0.69198 0.322406 0.3695737 1.3022e-27 1.0000e+00 hypermethylated 7.2344e-26 1.0000e+00 hypermethylated 6.6952e-10 1.0000000 hypermethylated 5.5793e-08 1 hypermethylated 0.34649852 4.2116e-06 hypermethylated 1.6846e-04 hypermethylated 0.728367 0.777942 -0.0380577 6 0.69198 0.681746 0.010234 4.4716e-01 0.16365349 insignificant 1.0000e+00 1.00000 insignificant 3.9738e-01 0.0610977 insignificant 1.0000e+00 1 insignificant -0.0144971 7.2160e-01 insignificant 1.0000e+00 insignificant 0.730835 0.467186 0.2711787 6 0.684531 0.322406 0.3621251 2.8084e-18 1.0000e+00 hypermethylated 1.0802e-16 1.0000000 hypermethylated 1.3316e-08 1.000000 hypermethylated 8.8774e-07 1 hypermethylated 0.3381362 1.6859e-05 hypermethylated 6.7438e-04 hypermethylated 0.730835 0.777942 -0.0321412 6 0.684531 0.681746 0.00278546 3.1375e-01 0.15535431 insignificant 1.0000e+00 1.00000 insignificant 3.0454e-01 0.131270 insignificant 1.0000e+00 1 insignificant -0.0228594 6.6992e-01 insignificant 1.0000000 insignificant 0.467186 0.777942 -0.2963052 6 0.322406 0.681746 -0.3593396 1.0000e+00 1.5504e-14 hypomethylated 1.0000e+00 1.9380e-12 hypomethylated 1.0000e+00 3.0733e-08 hypomethylated 1.0000000 7.6833e-06 hypomethylated -0.360996 2.2060e-05 hypomethylated 0.00275752 hypomethylated chr1 38799676 38800676 1750 ENSG00000200796 0.64126 358 5 0.76856 238 5 0.62819 161 5 0.850561 310 5 0.817778 104 5 0.75974 434 5 0.694790 205 5 0.71500 198 5 0.846446 193 5 0.906855 165 5 0.846244 220 5 0.858051 95 4 0.712963 171 5 0.855381 146 5 0.785265 179 5 0.908596 74 5 0.513889 18 2 0.553867 499 5 0.659302 205 5 0.618906 413 5 0.886104 55 3 0.692581 91 4 0.87257 230 5 0.817822 83 5 0.716729 207 5 0.92412 249 5 0.721661 121 4 0.827957 107 5 0.859128 164 5 0.736370 355 5 0.878374 274 5 0.875263 302 5 0.2418786 218 5 0.053333 120 5 0.105121 431 5 0.0333333 15 2 0.043029 237 5 0.213882 245 5 0.589862 309 5 0.676720 258 5 0.622308 341 5 0.519928 244 4 0.524986 249 5 0.758241 0.729133 0.659024 0.846898 0.773034 0.853980 0.825774 0.775082 0.808170 0.896271 0.825699 0.844227 0.824428 0.782911 0.770313 0.885295 0.506989 0.619658 0.760933 0.866376 0.884990 0.778660 0.820738 0.811780 0.850019 0.908676 0.828182 0.994442 0.859821 0.881398 0.856729 0.867012 0.169076 0.0277154 0.1267755 0.071968 0.041538 0.127229 0.521213 0.621519 0.596626 0.419795 0.565656 4 0.784703 0.866845 -0.07917397 5 0.62369 0.629531 -0.0058450 0.9528382 9.8025e-05 weaklyHypometh 1 0.039432 weaklyHypometh 0.993731 0.00032028 weaklyHypometh 1 0.10029 insignificant -0.0703071 0.052348 lowCoverage 1 lowCoverage 0.784493 0.113744 0.6798064 5 0.62105 0.079870 0.5411848 2.9117e-45 1.0000e+00 hypermethylated 4.8528e-43 1.0000e+00 hypermethylated 1.5901e-12 1.0000000 hypermethylated 2.6502e-10 1 hypermethylated 0.63198617 4.4703e-08 lowCoverage 2.7940e-06 lowCoverage 0.784995 0.551035 0.2322006 5 0.69269 0.503080 0.189613 2.9763e-13 0.99982587 hypermethylated 4.9605e-11 1.00000 hypermethylated 1.9223e-08 0.9999824 hypermethylated 3.8447e-06 1 hypermethylated 0.1603217 1.8477e-03 lowCoverage 1.0265e-01 lowCoverage 0.866845 0.114286 0.7566320 5 0.629531 0.089853 0.5396779 1.8006e-39 1.0000e+00 hypermethylated 4.5016e-37 1.0000000 hypermethylated 4.2452e-10 1.000000 hypermethylated 5.6777e-08 1 hypermethylated 0.7022933 6.8221e-08 lowCoverage 6.0673e-06 lowCoverage 0.868397 0.551035 0.3098894 5 0.839375 0.503080 0.33629546 2.3148e-19 0.99999979 hypermethylated 1.1574e-16 1.00000 hypermethylated 1.2378e-09 1.000000 hypermethylated 5.5478e-07 1 hypermethylated 0.2306288 1.6765e-04 lowCoverage 0.0167647 lowCoverage 0.114741 0.551035 -0.4493411 5 0.119805 0.503080 -0.3832751 1.0000e+00 1.7963e-14 hypomethylated 1.0000e+00 1.9959e-12 hypomethylated 1.0000e+00 6.7216e-07 hypomethylated 1.0000000 8.4020e-05 hypomethylated -0.471665 4.2692e-06 lowCoverage 0.00085385 lowCoverage chr1 39484047 39485047 1818 MACF1 ENSG00000127603 0.61985 252 6 0.59246 151 6 0.54351 145 6 0.658818 119 6 0.663889 61 6 0.68542 249 6 0.606965 170 6 0.58491 120 6 0.572186 100 6 0.637915 98 6 0.704638 197 6 0.539133 84 6 0.623083 143 6 NA 0 0 0.696886 94 6 0.615231 79 6 0.620175 117 6 0.670525 131 5 0.672874 168 6 0.700833 253 6 0.615079 59 6 0.642857 76 5 0.71297 145 6 0.658988 96 6 0.635390 62 5 0.62153 207 6 0.667641 85 6 0.562774 69 6 0.569338 110 6 0.665497 202 6 0.661120 205 6 0.644666 293 6 0.5470009 130 6 0.582396 130 6 0.596584 169 6 0.7084441 90 6 0.702348 75 6 0.613988 190 6 0.650048 145 6 0.695323 190 6 0.610678 151 6 0.688396 178 5 0.689579 193 6 0.615670 0.595517 0.557902 0.651402 0.683627 0.691618 0.629575 0.589060 0.576322 0.648719 0.708573 0.535000 0.635833 NA 0.704893 0.619149 0.618087 0.680653 0.687856 0.715032 0.654343 0.648754 0.714024 0.679620 0.679504 0.635542 0.649327 0.568431 0.587200 0.686741 0.677707 0.661552 0.548749 0.6050627 0.5839853 0.691139 0.706059 0.627421 0.655070 0.704928 0.636852 0.693388 0.702426 5 0.658001 0.688005 -0.01371079 6 0.63677 0.648282 -0.0115166 0.8352051 1.9060e-01 insignificant 1 1.000000 insignificant 0.820099 0.24227308 insignificant 1 1.00000 insignificant -0.0060851 0.721438 insignificant 1 insignificant 0.658001 0.667092 0.0323217 6 0.63677 0.613443 0.0233224 1.3323e-02 9.3587e-01 weaklyHypermeth 1.0658e-01 1.0000e+00 insignificant 1.0665e-01 0.9091473 insignificant 8.0792e-01 1 insignificant 0.00694179 8.2001e-01 insignificant 1.0000e+00 insignificant 0.658001 0.610268 -0.0372146 6 0.63677 0.664419 -0.027653 7.0526e-01 0.05537541 insignificant 1.0000e+00 1.00000 insignificant 9.3430e-01 0.0250815 weaklyHypometh 1.0000e+00 1 insignificant -0.0347362 1.1693e-01 insignificant 1.0000e+00 insignificant 0.688005 0.667092 0.0450158 6 0.648282 0.613443 0.0348391 2.1251e-03 9.6669e-01 weaklyHypermeth 1.9861e-02 1.0000000 weaklyHypermeth 8.7203e-02 0.902469 insignificant 6.6063e-01 1 insignificant 0.0130269 6.7245e-01 insignificant 1.0000e+00 insignificant 0.688005 0.610268 -0.0149323 6 0.648282 0.664419 -0.01613640 7.6049e-01 0.36163610 insignificant 1.0000e+00 1.00000 insignificant 9.3562e-01 0.193555 insignificant 1.0000e+00 1 insignificant -0.0286510 1.9108e-01 insignificant 1.0000000 insignificant 0.667092 0.610268 -0.0526768 6 0.613443 0.664419 -0.0509755 9.7661e-01 8.9525e-03 weaklyHypometh 1.0000e+00 1.0786e-01 insignificant 9.8390e-01 1.9214e-02 weaklyHypometh 1.0000000 2.4954e-01 insignificant -0.041678 2.2148e-01 insignificant 1.00000000 insignificant chr1 40439724 40440724 1868 ENSG00000207508 0.70503 151 5 0.66402 100 5 0.75357 80 5 0.836089 104 5 0.811111 41 5 0.75739 264 5 0.724322 76 5 0.85043 64 5 0.781250 92 5 0.786111 82 5 0.779441 171 5 0.701190 37 5 0.726584 87 5 0.800000 5 1 0.865152 69 5 0.788254 37 4 0.794224 85 5 0.847551 124 5 0.785509 149 5 0.734499 186 5 0.848889 38 4 0.756364 53 5 0.87808 131 5 0.867251 52 4 0.980000 53 5 0.76878 123 5 0.740855 60 4 0.854167 40 4 0.623201 99 5 0.753444 126 5 0.773686 129 5 0.741248 205 5 0.6307776 87 5 0.592140 69 5 0.727436 110 5 0.6571429 34 5 0.830556 42 4 0.699775 138 5 0.847908 160 5 0.763982 191 5 0.821639 166 5 0.823900 197 5 0.790301 196 5 0.754647 0.730630 0.797104 0.889317 0.877897 0.824119 0.771233 0.883069 0.831573 0.856729 0.824935 0.741979 0.786572 NA 0.938138 0.809269 0.846423 0.881519 0.834457 0.823429 0.852466 0.767137 0.919572 0.869781 0.981283 0.806843 0.750235 0.875023 0.706591 0.808423 0.840573 0.796683 0.697429 0.6319028 0.7498697 0.659282 0.844623 0.747682 0.893494 0.816269 0.858111 0.864852 0.846973 4 0.807385 0.802525 0.00518973 5 0.77126 0.769283 0.0019818 0.4864425 7.5465e-01 insignificant 1 1.000000 insignificant 0.836047 0.28642642 insignificant 1 1.00000 insignificant -0.0242436 0.416865 lowCoverage 1 lowCoverage 0.807385 0.720833 0.0874322 5 0.77126 0.687335 0.0839297 2.1590e-06 8.1452e-01 weaklyHypermeth 2.6655e-05 1.0000e+00 weaklyHypermeth 1.0779e-04 0.7070647 weaklyHypermeth 1.8910e-03 1 weaklyHypermeth 0.08494852 5.6512e-02 lowCoverage 5.3314e-01 lowCoverage 0.807385 0.832967 -0.0359229 5 0.77126 0.807600 -0.036335 9.7506e-01 0.03433223 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8248e-01 0.0203127 weaklyHypometh 1.0000e+00 1 insignificant -0.0349596 9.4130e-02 lowCoverage 1.0000e+00 lowCoverage 0.802525 0.720833 0.0821310 5 0.769283 0.687335 0.0819479 1.0892e-03 9.6668e-01 weaklyHypermeth 1.0892e-02 1.0000000 weaklyHypermeth 1.8561e-03 0.996421 weaklyHypermeth 2.2636e-02 1 weaklyHypermeth 0.1091921 2.8663e-02 lowCoverage 3.1498e-01 lowCoverage 0.802525 0.832967 -0.0385318 5 0.769283 0.807600 -0.03831670 9.7850e-01 0.04664808 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.4543e-01 0.257153 insignificant 1.0000e+00 1 insignificant -0.0107160 7.2775e-01 lowCoverage 1.0000000 lowCoverage 0.720833 0.832967 -0.1209862 5 0.687335 0.807600 -0.1202646 9.9831e-01 1.1454e-05 weaklyHypometh 1.0000e+00 2.8889e-04 weaklyHypometh 9.8894e-01 9.5316e-05 weaklyHypometh 1.0000000 4.1442e-03 weaklyHypometh -0.119908 1.5745e-02 lowCoverage 0.26686471 lowCoverage chr1 40823622 40824622 1882 ENSG00000220190 0.88414 203 6 0.62798 130 6 0.62974 125 6 0.829873 146 6 0.701265 60 4 0.74091 330 6 0.673569 88 5 0.66056 112 6 0.713636 104 6 0.834809 74 6 0.883606 203 6 0.528846 63 4 0.595689 118 6 1.000000 15 1 0.778789 87 6 0.883333 38 4 0.399227 65 4 0.713287 125 6 0.837227 134 6 0.743155 236 6 0.728758 50 4 0.731146 82 4 0.69642 170 6 0.694524 72 4 0.811012 47 3 0.82468 143 6 0.685113 64 6 0.528395 60 4 0.612050 113 6 0.654704 142 6 0.723474 130 6 0.795146 301 6 0.5704334 111 6 0.691102 93 6 0.632241 92 5 0.7324074 60 4 0.890659 72 4 0.705884 150 6 0.674129 182 6 0.710591 199 6 0.774225 153 6 0.881891 168 6 0.870439 148 6 0.868297 0.767339 0.712347 0.823649 0.799148 0.834785 0.852314 0.744050 0.772796 0.784114 0.892263 0.780288 0.820146 0.895647 0.795616 0.846212 0.719377 0.856453 0.887281 0.830914 0.913354 0.723478 0.774200 0.843932 0.919535 0.838066 0.805066 0.879091 0.794207 0.853076 0.828951 0.800793 0.731703 0.7769547 0.7569209 0.672551 0.892079 0.591368 0.883726 0.865862 0.805625 0.897207 0.894963 4 0.811889 0.801310 0.00576250 6 0.68315 0.661411 0.0217401 0.6803427 8.7684e-01 insignificant 1 1.000000 insignificant 0.841339 0.57295044 insignificant 1 1.00000 insignificant 0.0258640 0.520578 insignificant 1 insignificant 0.811889 0.724913 0.0800786 6 0.68315 0.554509 0.1286419 1.6595e-04 9.7744e-01 weaklyHypermeth 1.6763e-03 1.0000e+00 weaklyHypermeth 1.1215e-01 0.9539599 insignificant 8.3072e-01 1 insignificant 0.02919459 6.0205e-01 insignificant 1.0000e+00 insignificant 0.811889 0.857647 -0.0412357 6 0.68315 0.642979 0.040171 8.9717e-01 0.07882685 insignificant 1.0000e+00 1.00000 insignificant 9.3342e-01 0.0989296 insignificant 1.0000e+00 1 insignificant -0.0492728 3.6883e-01 insignificant 1.0000e+00 insignificant 0.801310 0.724913 0.0749477 6 0.661411 0.554509 0.1069018 3.4665e-03 9.7750e-01 weaklyHypermeth 3.1514e-02 1.0000000 weaklyHypermeth 8.1359e-02 0.903816 insignificant 6.2964e-01 1 insignificant 0.0033306 9.4903e-01 insignificant 1.0000e+00 insignificant 0.801310 0.857647 -0.0449814 6 0.661411 0.642979 0.01843136 9.3045e-01 0.03498704 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.4274e-01 0.181387 insignificant 1.0000e+00 1 insignificant -0.0751368 1.6342e-01 insignificant 1.0000000 insignificant 0.724913 0.857647 -0.1178988 6 0.554509 0.642979 -0.0884704 9.8907e-01 3.9029e-03 weaklyHypometh 1.0000e+00 5.0687e-02 weaklyHypometh 9.9355e-01 9.9416e-02 insignificant 1.0000000 9.8881e-01 insignificant -0.078467 2.2871e-01 insignificant 1.00000000 insignificant chr1 41062377 41063377 1912 ENSG00000222708 0.91176 232 12 0.92650 145 10 0.91238 119 8 0.957215 222 7 0.874941 79 7 0.78594 320 12 0.935897 79 3 0.93889 115 9 0.937202 155 8 0.934524 110 8 0.889348 192 13 0.935196 64 2 0.938508 124 3 0.940604 45 2 0.915539 155 7 0.937500 66 8 0.793771 45 2 0.842369 198 7 0.952951 165 12 0.926742 224 12 0.929487 90 10 0.919472 84 7 0.87218 109 3 0.881702 126 7 0.935259 179 7 0.82865 204 12 0.773571 87 5 0.874490 72 2 0.909723 185 7 0.908829 200 12 0.916781 168 11 0.918305 229 12 0.8387698 151 8 0.886337 140 12 1.000000 191 11 0.8005952 25 2 0.861555 115 8 0.926190 117 7 0.895224 204 11 0.922510 263 12 0.939971 153 7 0.920811 110 7 0.888992 128 7 0.802093 0.812596 0.941037 0.854800 0.825131 0.837887 0.891705 0.902842 0.832529 0.848365 0.829964 0.899214 0.826626 0.873933 0.861159 0.798387 0.814982 0.773364 0.921649 0.886881 0.857911 0.774788 0.865389 0.715438 0.821940 0.768020 0.782028 0.911455 0.852427 0.836565 0.829031 0.864375 0.783597 0.7951003 0.8899680 0.731468 0.753082 0.785385 0.763077 0.746822 0.853548 0.809959 0.806150 2 0.864401 0.852002 0.02321720 7 0.90854 0.894439 0.0141046 0.0063448 6.8493e-01 weaklyHypermeth 1 1.000000 insignificant 0.067860 0.88660962 insignificant 1 1.00000 insignificant 0.0203516 0.257145 insignificant 1 insignificant 0.864306 0.861601 0.0316693 12 0.90151 0.909335 -0.0078268 3.9848e-02 4.3975e-01 weaklyHypermeth 2.8875e-01 1.0000e+00 insignificant 1.4086e-01 0.6777712 insignificant 1.0000e+00 1 insignificant 0.02381419 4.6562e-01 insignificant 1.0000e+00 insignificant 0.864306 0.802800 0.0393454 7 0.90151 0.916870 -0.015361 2.3174e-01 0.25378601 insignificant 1.0000e+00 1.00000 insignificant 1.2160e-01 0.5908559 insignificant 1.0000e+00 1 insignificant -0.0041128 7.7965e-01 insignificant 1.0000e+00 insignificant 0.851658 0.861976 0.0124537 7 0.880833 0.915811 -0.0349778 6.4052e-01 4.3512e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6395e-01 0.704740 insignificant 1.0000e+00 1 insignificant 0.0034626 9.1621e-01 insignificant 1.0000e+00 insignificant 0.851658 0.803030 0.0140061 7 0.880833 0.922807 -0.04197406 8.4641e-01 0.18773813 insignificant 1.0000e+00 1.00000 insignificant 7.4894e-01 0.603338 insignificant 1.0000e+00 1 insignificant -0.0244644 1.6143e-01 insignificant 1.0000000 insignificant 0.861976 0.803030 -0.0063347 7 0.915811 0.922807 -0.0069963 7.9999e-01 5.6334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8619e-01 7.2234e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.027927 3.9074e-01 insignificant 1.00000000 insignificant chr1 41562113 41563113 1934 ENSG00000213987 0.90931 351 8 0.72529 250 8 0.93422 201 8 0.977675 213 8 0.843531 142 8 0.93751 471 8 0.865395 180 7 0.93118 169 8 0.885323 145 8 0.969108 153 7 0.816093 326 8 0.836508 97 7 0.958984 222 7 0.939394 24 2 0.895331 153 8 0.876543 71 7 0.846907 68 6 0.947872 171 7 0.917843 94 8 0.922654 276 8 0.856736 57 6 0.895147 53 6 0.94701 109 7 0.924908 108 8 0.969231 42 6 0.97247 397 8 0.871381 58 4 0.845833 35 2 0.954356 86 7 0.967898 446 8 0.969071 423 8 0.916702 468 8 0.9461751 220 7 0.859788 53 6 0.900000 182 9 1.0000000 14 1 0.876710 166 8 0.910504 353 7 0.965193 269 7 0.903906 267 7 0.958639 228 7 0.909124 238 7 0.982126 292 7 0.887214 0.793586 0.916451 0.973067 0.834523 0.939919 0.929625 0.917388 0.876997 0.944340 0.896090 0.823401 0.947930 0.896292 0.886851 0.868783 0.851395 0.944728 0.916801 0.920126 0.807483 0.914512 0.934921 0.914129 0.951429 0.959089 0.882483 0.899206 0.958644 0.949584 0.965267 0.922466 0.944843 0.8702948 1.0000000 0.981097 0.891980 0.895898 0.947772 0.911947 0.945824 0.919904 0.965788 5 0.907334 0.942594 -0.03545910 8 0.88596 0.936417 -0.0504567 0.9978450 4.8929e-03 weaklyHypometh 1 0.716251 insignificant 0.997909 0.00042530 weaklyHypometh 1 0.10029 insignificant -0.0273952 0.166469 insignificant 1 insignificant 0.907334 0.917004 -0.0116053 7 0.88596 0.915110 -0.0291498 3.0197e-01 8.2315e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3902e-01 0.0107777 weaklyHypometh 1.0000e+00 1 insignificant -0.01869589 4.7074e-01 insignificant 1.0000e+00 insignificant 0.907334 0.940495 -0.0349140 7 0.88596 0.952175 -0.066215 9.9926e-01 0.06524153 insignificant 1.0000e+00 1.00000 insignificant 9.9994e-01 0.0316158 weaklyHypometh 1.0000e+00 1 insignificant -0.0469641 4.5826e-02 weaklyHypometh 7.6376e-01 insignificant 0.942594 0.917004 0.0209022 7 0.936417 0.915110 0.0213069 4.1308e-02 7.3516e-01 weaklyHypermeth 3.1058e-01 1.0000000 insignificant 3.5681e-01 0.318555 insignificant 1.0000e+00 1 insignificant 0.0086994 7.3338e-01 insignificant 1.0000e+00 insignificant 0.942594 0.940495 0.0022240 7 0.936417 0.952175 -0.01575853 5.0904e-01 0.60372486 insignificant 1.0000e+00 1.00000 insignificant 2.6218e-01 0.748890 insignificant 1.0000e+00 1 insignificant -0.0195689 3.6714e-01 insignificant 1.0000000 insignificant 0.917004 0.940495 -0.0161734 7 0.915110 0.952175 -0.0370654 8.6268e-01 2.4903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2787e-01 8.4340e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.028268 3.0687e-01 insignificant 1.00000000 insignificant chr1 41629360 41630360 1946 FOXO6 ENSG00000204060 0.59162 206 6 0.55363 104 6 0.73748 49 6 0.487918 163 6 0.317593 29 4 0.67541 249 6 0.502968 40 5 0.50896 72 6 0.544218 74 6 0.606650 75 6 0.707071 177 6 0.333333 15 1 0.410879 93 6 0.618367 45 6 0.571609 70 6 0.500000 8 1 0.500000 5 0 0.424316 434 6 0.752661 102 6 0.433035 166 6 0.545055 113 6 0.384259 61 5 0.54172 69 6 0.634732 66 5 0.738889 54 5 0.43844 147 6 0.660126 165 6 0.606731 40 5 0.627083 64 6 0.554530 135 6 0.424575 125 6 0.593480 203 6 0.5285278 127 6 0.517291 180 6 0.287792 210 6 0.3964646 51 5 0.621894 62 5 0.460481 181 6 0.283417 175 5 0.357983 180 6 0.343602 135 6 0.202264 74 6 0.313802 170 5 0.558368 0.424800 0.713018 0.513010 0.400641 0.586520 0.554071 0.521698 0.449328 0.625677 0.685175 0.400641 0.495217 0.601190 0.493735 0.383882 0.383882 0.437893 0.759106 0.510854 0.541369 0.329594 0.601538 0.620204 0.732692 0.513626 0.638286 0.560688 0.627965 0.526190 0.423655 0.680882 0.410031 0.4412223 0.2802412 0.354312 0.520973 0.487877 0.248257 0.366660 0.289423 0.142884 0.363710 4 0.537684 0.561192 -0.02326355 6 0.51506 0.389126 0.1259351 0.9531542 5.4397e-01 insignificant 1 1.000000 insignificant 0.661929 0.47453612 insignificant 1 1.00000 insignificant -0.0235825 0.568023 insignificant 1 insignificant 0.537931 0.406905 0.1218390 6 0.57944 0.517022 0.0624222 3.3748e-04 7.6552e-01 weaklyHypermeth 3.3413e-03 1.0000e+00 weaklyHypermeth 1.3397e-02 0.9460942 weaklyHypermeth 1.3264e-01 1 insignificant 0.07014428 2.3369e-01 insignificant 1.0000e+00 insignificant 0.537931 0.264305 0.2566881 6 0.57944 0.290650 0.288794 5.6783e-09 0.99999073 hypermethylated 5.1621e-07 1.00000 hypermethylated 5.4203e-07 0.9999806 hypermethylated 4.9275e-05 1 hypermethylated 0.2386726 3.5016e-05 hypermethylated 8.3499e-03 hypermethylated 0.562097 0.406905 0.1416009 6 0.437767 0.517022 -0.0792547 2.7955e-05 8.5855e-01 weaklyHypermeth 3.4512e-04 1.0000000 weaklyHypermeth 8.5117e-04 0.874665 weaklyHypermeth 1.1349e-02 1 weaklyHypermeth 0.0937268 1.2893e-01 insignificant 1.0000e+00 insignificant 0.562097 0.264305 0.2801898 6 0.437767 0.290650 0.14711675 1.0694e-09 1.00000000 hypermethylated 1.1882e-07 1.00000 hypermethylated 1.0248e-07 0.999823 hypermethylated 1.7079e-05 1 hypermethylated 0.2622551 2.6019e-05 hypermethylated 0.0079782 hypermethylated 0.406905 0.264305 0.1122943 6 0.517022 0.290650 0.2263715 1.2463e-02 9.9746e-01 weaklyHypermeth 7.3310e-01 1.0000e+00 insignificant 1.4252e-02 9.9979e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.168528 1.5691e-02 weaklyHypermeth 0.26686471 insignificant chr1 41637056 41638056 1949 FOXO6 ENSG00000204060 0.47529 351 11 0.44300 381 10 0.66962 211 10 0.528835 365 11 0.559419 211 9 0.50259 440 12 0.674499 276 10 0.57434 235 10 0.663713 196 10 0.521261 121 8 0.673579 462 10 0.648769 84 8 0.474835 167 8 0.526700 125 9 0.527349 247 10 0.635417 116 6 0.416667 21 2 0.390383 311 11 0.497360 347 11 0.445421 343 10 0.711459 139 10 0.470731 74 5 0.54347 277 11 0.618351 247 10 0.533439 133 9 0.45435 496 14 0.480073 225 10 0.536122 117 9 0.538431 342 10 0.417863 578 12 0.381232 537 11 0.728620 354 11 0.1424214 368 10 0.139001 330 10 0.015325 395 11 0.1839291 138 9 0.148491 355 9 0.169624 669 14 0.355514 456 14 0.429121 380 12 0.386924 286 11 0.467669 315 11 0.275613 356 11 0.598995 0.453468 0.668629 0.556309 0.562724 0.582164 0.700727 0.557137 0.605313 0.504121 0.686261 0.632244 0.461644 0.509105 0.487043 0.630317 NA 0.431235 0.525059 0.436210 0.667856 0.445212 0.651412 0.641626 0.542617 0.512647 0.525741 0.519314 0.568268 0.419756 0.403634 0.705770 0.121463 0.1117103 0.0089971 0.141439 0.146294 0.131768 0.377037 0.457639 0.331089 0.446983 0.299067 5 0.572569 0.570779 0.01172150 10 0.47272 0.457073 0.0156442 0.6341936 7.3538e-01 insignificant 1 1.000000 insignificant 0.927914 0.65507090 insignificant 1 1.00000 insignificant 0.0079402 0.832726 insignificant 1 insignificant 0.572569 0.132209 0.4507178 10 0.47272 0.122960 0.3497567 1.3527e-49 1.0000e+00 hypermethylated 4.5089e-47 1.0000e+00 hypermethylated 7.7730e-20 0.9999905 hypermethylated 2.5910e-17 1 hypermethylated 0.40932024 1.2515e-08 hypermethylated 1.0430e-06 hypermethylated 0.572684 0.388393 0.1752528 10 0.50648 0.385439 0.121043 1.4509e-07 0.99962727 weaklyHypermeth 6.9092e-06 1.00000 weaklyHypermeth 2.2782e-07 0.9988926 weaklyHypermeth 2.2782e-05 1 weaklyHypermeth 0.1594842 3.8836e-03 weaklyHypermeth 1.5534e-01 insignificant 0.570617 0.132151 0.4401820 10 0.428506 0.115275 0.3132305 8.8693e-32 1.0000e+00 hypermethylated 8.8693e-30 1.0000000 hypermethylated 5.6644e-14 1.000000 hypermethylated 1.8881e-11 1 hypermethylated 0.4013801 2.8475e-08 hypermethylated 2.8803e-06 hypermethylated 0.570779 0.388176 0.1542156 10 0.457073 0.359744 0.09732943 4.1229e-05 0.99997323 weaklyHypermeth 1.2884e-03 1.00000 weaklyHypermeth 9.4381e-05 0.999998 weaklyHypermeth 4.9674e-03 1 weaklyHypermeth 0.1515440 6.3489e-03 weaklyHypermeth 0.2885861 insignificant 0.132268 0.388176 -0.2719381 11 0.122960 0.359744 -0.2367831 9.9998e-01 4.1773e-15 hypomethylated 1.0000e+00 6.9621e-13 hypomethylated 9.9992e-01 1.5092e-07 hypomethylated 1.0000000 2.5154e-05 hypomethylated -0.249836 3.2796e-04 hypomethylated 0.01726122 hypomethylated chr1 41692377 41693377 1953 FOXO6 ENSG00000204060 0.91062 154 5 0.80600 77 4 0.89810 27 3 0.871664 177 5 1.000000 22 2 0.89049 192 5 0.781994 35 3 0.66914 48 4 0.906250 13 1 0.800000 5 1 0.921758 94 5 0.666667 5 0 0.966667 15 1 0.975000 17 1 0.900000 15 1 1.000000 3 0 NA 0 0 0.597225 129 4 0.742694 100 5 0.892838 130 5 0.926667 28 4 0.635417 15 1 0.92000 36 4 0.461111 15 2 0.834073 217 5 0.90552 81 5 0.690476 27 2 0.760000 19 2 0.808829 56 4 0.955927 92 5 0.679823 76 5 0.900021 110 5 0.4519298 90 5 0.489156 72 5 0.333333 85 3 0.4643522 148 5 0.375794 72 4 0.477051 132 5 0.702951 84 5 0.709206 83 5 0.720641 86 5 0.636364 39 3 0.574948 80 4 0.933707 0.925532 0.828798 0.883805 1.000000 0.869048 0.788549 0.729252 0.772609 0.795557 0.952381 0.523810 0.920635 0.903561 0.761905 0.890795 NA 0.759307 0.831132 0.927154 0.990476 0.458970 0.904762 0.649370 0.803958 0.909239 0.920635 0.911111 0.901973 0.895064 0.867748 0.883509 0.495071 0.3551333 0.4761905 0.263961 0.368481 0.485501 0.552318 0.709751 0.658883 0.725417 0.467825 0 0.835463 0.851948 -0.01688180 5 0.87324 0.721999 0.1512398 0.9772100 4.4221e-01 insignificant 1 1.000000 insignificant 0.257264 0.93809774 insignificant 1 1.00000 insignificant 0.0626573 0.232210 lowCoverage 1 lowCoverage 0.833866 0.282137 0.4886646 5 0.76213 0.379865 0.3822622 6.8099e-23 9.9999e-01 hypermethylated 2.8375e-21 1.0000e+00 hypermethylated 9.4154e-08 0.9999981 hypermethylated 4.0937e-06 1 hypermethylated 0.42054293 3.3088e-09 lowCoverage 3.3088e-07 lowCoverage 0.835068 0.620968 0.1949907 5 0.84789 0.705578 0.142309 1.4955e-08 0.83406781 weaklyHypermeth 1.1504e-06 1.00000 weaklyHypermeth 2.5255e-05 0.9997423 weaklyHypermeth 1.3292e-03 1 weaklyHypermeth 0.1836569 4.0688e-04 lowCoverage 2.5718e-02 lowCoverage 0.853056 0.282609 0.5394833 5 0.866399 0.455839 0.4105603 4.2146e-22 1.0000e+00 hypermethylated 2.4792e-20 1.0000000 hypermethylated 1.7072e-05 0.999962 hypermethylated 4.3774e-04 1 hypermethylated 0.3578856 2.5534e-06 lowCoverage 1.3439e-04 lowCoverage 0.853056 0.620968 0.2415083 5 0.866399 0.705578 0.16082102 2.0693e-10 0.96282846 hypermethylated 2.5867e-08 1.00000 hypermethylated 9.3478e-04 0.978566 hypermethylated 2.8327e-02 1 hypermethylated 0.1209996 3.2328e-02 lowCoverage 0.7027730 lowCoverage 0.282609 0.620968 -0.3019261 5 0.455839 0.705578 -0.2497392 9.9998e-01 2.3779e-10 hypomethylated 1.0000e+00 1.3988e-08 hypomethylated 9.9608e-01 1.6009e-04 hypomethylated 1.0000000 6.1574e-03 hypomethylated -0.236886 1.6802e-04 lowCoverage 0.01200170 lowCoverage chr1 41968491 41969491 1968 HIVEP3 ENSG00000127124 0.91258 370 8 0.87445 288 6 0.84900 202 6 0.938955 207 7 0.971966 116 5 0.92108 345 8 0.856891 222 6 0.89577 183 6 0.867194 199 6 0.899261 144 6 0.939466 267 6 0.872313 98 6 0.923901 193 6 0.915033 35 2 0.910487 219 6 0.960317 75 5 0.677951 76 4 0.873526 309 7 0.922226 397 6 0.862134 317 6 0.969553 131 5 0.907899 68 5 0.93237 233 6 0.951632 90 6 0.852778 54 5 0.93453 344 6 0.918893 176 6 0.969363 113 5 0.957514 383 5 0.917928 335 6 0.899943 349 6 0.955447 364 8 0.8910656 299 6 0.873880 181 6 1.000000 106 5 0.6726190 22 3 0.921731 172 6 0.936786 378 8 0.885407 376 7 0.813087 303 9 0.852038 157 5 0.865381 319 7 0.889137 264 7 0.875239 0.863020 0.856337 0.944933 0.966293 0.906681 0.866276 0.889781 0.886341 0.912090 0.955906 0.882559 0.929221 0.892369 0.927763 0.977581 0.877806 0.787149 0.887848 0.837167 0.945282 0.877673 0.907208 0.911662 0.849458 0.883246 0.921977 0.973393 0.936184 0.916862 0.867005 0.954872 0.901699 0.8994143 0.9584146 0.926383 0.938541 0.948861 0.846339 0.791094 0.860065 0.916555 0.829787 4 0.895589 0.922727 -0.02676569 6 0.91886 0.950603 -0.0317465 0.9999978 5.4232e-03 weaklyHypometh 1 0.716251 insignificant 0.999950 0.01850285 weaklyHypometh 1 0.82004 insignificant -0.0384290 0.029568 weaklyHypometh 1 insignificant 0.895589 0.934370 -0.0353837 6 0.91886 0.941251 -0.0223946 9.5282e-01 3.2241e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5716e-01 0.2932500 insignificant 1.0000e+00 1 insignificant 0.00954446 8.4793e-01 insignificant 1.0000e+00 insignificant 0.895564 0.856135 0.0320528 5 0.90984 0.858951 0.050889 1.0810e-03 0.98950649 weaklyHypermeth 2.2060e-02 1.00000 weaklyHypermeth 1.0565e-02 0.9734056 weaklyHypermeth 2.2953e-01 1 insignificant 0.0312149 1.3133e-01 insignificant 1.0000e+00 insignificant 0.922727 0.934370 -0.0094988 6 0.950603 0.941251 0.0093519 5.4597e-01 5.6193e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2232e-01 0.876312 insignificant 1.0000e+00 1 insignificant 0.0479735 3.4737e-01 insignificant 1.0000e+00 insignificant 0.922639 0.856135 0.0504851 5 0.945114 0.858951 0.08616245 3.1516e-05 0.99990812 weaklyHypermeth 1.0496e-03 1.00000 weaklyHypermeth 1.6648e-03 0.999098 weaklyHypermeth 4.6244e-02 1 weaklyHypermeth 0.0696439 3.0616e-03 weaklyHypermeth 0.1611349 insignificant 0.934199 0.856135 0.0569631 5 0.934723 0.858951 0.0757715 7.7216e-04 9.9953e-01 weaklyHypermeth 7.7216e-02 1.0000e+00 weaklyHypermeth 3.0675e-02 9.8971e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.021670 6.6566e-01 insignificant 1.00000000 insignificant chr1 43273938 43274938 2005 ENSG00000207256 0.698227 209 9 0.808282 210 11 0.805579 202 11 0.7180174 112 9 0.730556 61 7 0.82974 216 10 0.715589 141 10 0.719750 170 10 0.746150 140 10 0.895539 121 9 0.823506 321 10 0.813796 91 8 0.512477 248 10 NA 0 0 0.76123 119 9 0.8000000 31 2 0.6859524 78 8 0.738035 149 7 0.619661 191 10 0.513330 213 9 0.870635 70 7 0.144112 122 7 0.791490 225 11 0.699652 99 9 0.6871439 49 2 0.531566 278 11 0.61659 127 10 0.857500 61 7 0.605083 112 9 0.598935 265 11 0.518240 282 11 0.830740 286 9 0.611680 239 11 0.831188 187 10 0.678619 238 10 0.67576 60 6 0.781685 109 7 0.802484 174 11 0.229018 270 9 0.483192 218 9 0.1405567 125 7 0.411648 166 9 0.349817 123 8 0.740281 0.792061 0.779225 0.6167899 0.6645299 0.786071 0.6891401 0.689824 0.715458 0.8896389 0.829767 0.80434 0.4814076 NA 0.686895 0.750000 0.586040 0.631444 0.558565 0.452436 0.8468661 0.121531 0.745895 0.698963 0.65401 0.5064833 0.616382 0.8064103 0.509741 0.5341358 0.445199 0.793655 0.600163 0.773322 0.706280 0.523530 0.747656 0.690067 0.169694 0.379666 0.1182315 0.324684 0.35400 2 0.695997 0.613360 0.0868205 10 0.726917 0.644666 0.0822509 9.7046e-05 0.999986 weaklyHypermeth 0.097046 1 weaklyHypermeth 0.0062117 0.9966298 weaklyHypermeth 1 1.00000 insignificant 0.0874691 0.180754 insignificant 1 insignificant 0.695997 0.718967 -0.0223013 10 0.726917 0.731015 -0.0040983 2.4502e-01 5.0501e-04 weaklyHypometh 1.0000e+00 4.5910e-02 weaklyHypometh 7.6309e-01 2.1655e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0032070 9.4108e-01 insignificant 1.0000e+00 insignificant 0.695997 0.256098 0.4099758 9 0.726917 0.347396 0.3795206 1.2374e-29 1.00000000 hypermethylated 4.1246e-27 1.00000 hypermethylated 3.9557e-15 1.0000e+00 hypermethylated 1.9779e-12 1.000000 hypermethylated 0.410596 1.3905e-03 weaklyHypermeth 0.07318414 weaklyHypermeth 0.613360 0.718967 -0.087001 11 0.644666 0.731015 -0.0863492 8.2188e-01 8.6098e-06 weaklyHypometh 1.0000e+00 1.7220e-03 weaklyHypometh 9.5170e-01 1.9862e-03 weaklyHypometh 1.0000e+00 3.3104e-01 insignificant -0.084262 2.3213e-01 insignificant 1.00000000 insignificant 0.613360 0.256098 0.3324005 9 0.644666 0.347396 0.2972697 9.8141e-13 9.9954e-01 hypermethylated 1.9628e-10 1.0000000 hypermethylated 8.0422e-10 0.99998967 hypermethylated 1.6084e-07 1.00000 hypermethylated 0.3231273 2.8482e-03 weaklyHypermeth 0.19022975 insignificant 0.718967 0.256098 0.42737441 9 0.731015 0.347396 0.3836189 4.4529e-15 9.9998e-01 hypermethylated 1.4843e-12 1.0000e+00 hypermethylated 3.0659e-08 1.0000e+00 hypermethylated 1.0220e-05 1.0000e+00 hypermethylated 0.4073894 9.3563e-04 hypermethylated 0.09022576 hypermethylated chr1 43662023 43663023 2028 KIAA0467 ENSG00000198198 0.855087 250 9 0.851953 184 9 0.819898 262 9 0.9268388 192 5 0.912341 135 9 0.92614 280 8 0.868431 276 9 0.900172 171 9 0.915377 188 9 0.878716 172 9 0.863775 317 9 0.872496 220 9 0.955239 200 9 NA 0 0 0.90642 160 8 0.8454278 172 8 0.9353989 162 9 0.925804 231 7 0.956735 171 8 0.934246 237 8 0.918871 123 8 0.979798 80 4 0.840594 205 8 0.944246 101 8 0.9960317 68 3 0.929929 183 9 0.94484 115 8 0.918912 124 9 0.785105 87 8 0.945948 177 9 0.933171 162 9 0.821987 294 8 0.807662 197 9 0.828269 159 8 0.812164 243 9 0.78175 45 3 0.908762 110 9 0.807971 155 8 0.948315 256 4 0.941709 287 8 0.9212302 181 4 0.934757 268 5 0.927379 265 6 0.877401 0.870458 0.785505 0.9306068 0.9056507 0.907901 0.8634729 0.896839 0.914359 0.8721304 0.844942 0.83370 0.9351383 NA 0.851394 0.824442 0.926200 0.888525 0.924850 0.923156 0.9309695 0.950948 0.835024 0.937757 0.98972 0.9500133 0.897314 0.9345493 0.860478 0.9524387 0.916353 0.892052 0.797023 0.909108 0.733880 0.894784 0.913482 0.685492 0.959066 0.921932 0.9326682 0.883753 0.94739 3 0.887437 0.913322 -0.0264441 8 0.897627 0.908677 -0.0110495 7.9521e-01 0.020884 weaklyHypometh 1.000000 1 insignificant 0.9798889 0.0025339 weaklyHypometh 1 0.57091 insignificant -0.0158918 0.451368 insignificant 1 insignificant 0.887437 0.804180 0.0875299 9 0.897627 0.816368 0.0812592 2.7432e-06 9.1725e-01 weaklyHypermeth 7.4141e-05 1.0000e+00 weaklyHypermeth 2.3175e-02 7.0566e-01 weaklyHypermeth 4.3726e-01 1.0000e+00 insignificant 0.0729655 7.0575e-03 weaklyHypermeth 1.9074e-01 insignificant 0.887437 0.920446 -0.0425533 5 0.897627 0.930030 -0.0324027 9.1288e-01 0.00058966 weaklyHypometh 1.0000e+00 0.14742 insignificant 9.9287e-01 1.1839e-04 weaklyHypometh 1.0000e+00 0.059197 weaklyHypometh -0.037283 1.5460e-03 weaklyHypometh 0.07729874 weaklyHypometh 0.913322 0.804180 0.109552 8 0.908677 0.816368 0.0923088 7.2628e-06 9.8509e-01 weaklyHypermeth 1.9629e-04 1.0000e+00 weaklyHypermeth 8.5619e-04 9.6508e-01 weaklyHypermeth 2.7619e-02 1.0000e+00 weaklyHypermeth 0.088857 3.8824e-03 weaklyHypermeth 0.11764994 insignificant 0.913322 0.920446 -0.0126789 5 0.908677 0.930030 -0.0213532 9.6369e-01 1.2423e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3501e-01 0.19562671 insignificant 1.0000e+00 1.00000 insignificant -0.0213917 2.8404e-01 insignificant 1.00000000 insignificant 0.804180 0.920446 -0.12378734 5 0.816368 0.930030 -0.1136620 9.9826e-01 3.9061e-05 weaklyHypometh 1.0000e+00 2.0558e-03 weaklyHypometh 9.6678e-01 3.2239e-04 weaklyHypometh 1.0000e+00 4.0299e-02 weaklyHypometh -0.1102490 1.2142e-03 weaklyHypometh 0.09022576 weaklyHypometh chr1 43851261 43852261 2044 PTPRF ENSG00000142949 0.847663 124 4 0.846643 253 7 0.852920 174 7 0.9865455 141 2 0.854806 203 7 0.73843 177 5 0.747737 152 6 0.716503 133 7 0.871127 135 7 0.843689 117 6 0.881042 334 7 0.920087 139 6 0.871145 147 6 0.979167 51 1 0.89812 174 6 0.8267131 127 6 0.8368772 822 6 0.967844 132 2 0.896929 263 7 0.824989 143 5 0.811665 118 6 0.705069 39 1 0.930869 108 6 0.755348 74 4 0.8442235 58 2 0.927406 206 7 0.59705 120 4 0.774043 97 5 0.762659 149 7 0.909750 207 5 0.864691 190 6 0.891591 162 6 0.905594 128 7 0.867664 147 7 0.772245 127 7 0.81250 38 1 0.596338 136 7 0.864054 160 6 0.867157 146 3 0.941279 117 2 0.9736111 112 2 0.734914 126 2 0.632989 95 2 0.929420 0.921221 0.899520 0.9501417 0.8951585 0.940250 0.8404929 0.882905 0.875241 0.9219443 0.880289 0.88136 0.9183207 0.947458 0.929060 0.771719 0.981410 0.940339 0.910867 0.955893 0.9153205 0.918114 0.891960 0.774328 0.79901 0.9302870 0.804287 0.8620538 0.862204 0.9230522 0.956730 0.949968 0.889166 0.828290 0.965797 0.973558 0.890715 0.956448 0.945687 0.969474 0.9307292 0.915133 0.84081 1 0.915250 0.878927 0.0287704 6 0.882115 0.861103 0.0210120 1.4343e-01 0.764034 insignificant 1.000000 1 insignificant 0.5518199 0.2913355 insignificant 1 1.00000 insignificant 0.0459189 0.185342 lowCoverage 1 lowCoverage 0.915250 0.850543 0.0410471 7 0.882115 0.800893 0.0812217 5.4707e-02 9.9661e-01 insignificant 7.2900e-01 1.0000e+00 insignificant 7.1308e-01 7.8345e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0573830 2.7786e-01 insignificant 1.0000e+00 insignificant 0.915099 0.927852 0.0045553 2 0.865274 0.850869 0.0144051 2.9797e-01 0.05918852 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.4949e-01 9.3353e-03 lowCoverage 1.0000e+00 0.977670 lowCoverage 0.030459 6.6648e-01 lowCoverage 1.00000000 lowCoverage 0.878927 0.850543 0.011346 6 0.861103 0.800893 0.0602096 1.8947e-01 7.3532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0436e-01 6.4201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.011464 8.3659e-01 lowCoverage 1.00000000 lowCoverage 0.878768 0.927852 -0.0291164 2 0.841260 0.850869 -0.0096086 6.9569e-01 1.5389e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.1411e-01 0.06514704 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0154600 8.3384e-01 lowCoverage 1.00000000 lowCoverage 0.851296 0.927852 -0.03339553 2 0.820068 0.850869 -0.0308006 7.2663e-01 9.5985e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9326e-01 9.1918e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0269241 7.4145e-01 lowCoverage 1.00000000 lowCoverage chr1 44476693 44477693 2076 DMAP1 ENSG00000178028 0.332692 243 6 0.194610 158 6 0.225871 150 6 0.2488515 227 6 0.245433 114 6 0.32690 351 6 0.316797 165 6 0.242203 158 6 0.244740 219 6 0.230999 164 6 0.394381 181 6 0.166746 104 6 0.212603 232 6 0.317172 69 5 0.36302 191 6 0.2067308 94 5 0.1861472 97 6 0.424114 197 6 0.202575 103 6 0.274344 300 6 0.211616 96 6 0.258539 210 6 0.210263 169 6 0.165060 127 6 0.2311432 148 6 0.294796 215 6 0.11652 101 6 0.265365 145 6 0.313669 123 6 0.322457 282 6 0.272196 230 6 0.387422 308 6 0.519446 115 6 0.726973 105 6 0.392374 156 3 0.39377 48 6 0.634074 111 6 0.261341 144 6 0.530686 208 6 0.380727 136 6 0.2945092 158 6 0.304584 206 6 0.373458 245 6 0.293827 0.155152 0.218740 0.2257959 0.1835205 0.292180 0.2942181 0.221473 0.215625 0.2120062 0.346113 0.18290 0.1717795 0.236259 0.307389 0.166943 0.159182 0.383886 0.178482 0.241435 0.2499818 0.218800 0.177324 0.131526 0.20129 0.2443307 0.093302 0.2311125 0.281894 0.2585833 0.224569 0.344600 0.444338 0.589792 0.545206 0.332635 0.582028 0.210051 0.433495 0.335309 0.2667926 0.243777 0.31345 6 0.258175 0.228877 0.0101885 6 0.278087 0.273680 0.0044068 3.1080e-01 0.697305 insignificant 1.000000 1 insignificant 0.2722647 0.6473841 insignificant 1 1.00000 insignificant 0.0137595 0.611314 insignificant 1 insignificant 0.258175 0.421208 -0.2071740 6 0.278087 0.510405 -0.2323178 9.9999e-01 6.4653e-12 hypomethylated 1.0000e+00 2.1551e-09 hypomethylated 1.0000e+00 5.6363e-07 hypomethylated 1.0000e+00 1.8788e-04 hypomethylated -0.2201504 2.5032e-02 weaklyHypometh 5.0064e-01 insignificant 0.258175 0.289612 -0.0714071 6 0.278087 0.371816 -0.0937289 9.9588e-01 0.00038054 weaklyHypometh 1.0000e+00 0.12685 insignificant 9.9931e-01 4.0559e-04 weaklyHypometh 1.0000e+00 0.135198 insignificant -0.108946 5.8732e-02 insignificant 1.00000000 insignificant 0.228877 0.421208 -0.219121 6 0.273680 0.510405 -0.2367246 1.0000e+00 1.4956e-07 hypomethylated 1.0000e+00 4.9853e-05 hypomethylated 1.0000e+00 1.2453e-06 hypomethylated 1.0000e+00 6.2263e-04 hypomethylated -0.233910 1.9409e-02 weaklyHypometh 0.47338029 insignificant 0.228877 0.289612 -0.0782182 6 0.273680 0.371816 -0.0981356 9.9966e-01 2.2474e-03 weaklyHypometh 1.0000e+00 0.4494745 insignificant 9.9982e-01 0.00129982 weaklyHypometh 1.0000e+00 0.64991 insignificant -0.1227059 4.0106e-02 weaklyHypometh 1.00000000 insignificant 0.421208 0.289612 0.15185944 6 0.510405 0.371816 0.1385890 2.7144e-02 9.8509e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 3.3139e-02 9.9673e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1112041 2.1295e-01 insignificant 1.00000000 insignificant chr1 44543433 44544433 2100 DMAP1 ENSG00000178028 0.961253 554 7 0.912284 481 7 0.910714 198 7 0.9518617 488 7 0.979248 124 7 0.94815 539 7 0.916335 137 7 0.963014 329 7 0.851596 266 7 0.975134 334 7 0.927612 379 7 0.775910 151 6 0.949505 447 7 0.884412 183 7 0.91498 367 7 0.8915033 166 6 0.9166667 39 3 0.923450 525 7 0.963314 252 7 0.956323 436 7 0.861111 53 4 0.896817 165 7 0.827624 256 7 0.880159 175 7 0.7334603 96 6 0.935410 478 7 0.84683 197 7 0.982253 193 7 0.964223 311 7 0.958736 578 7 0.943165 489 7 0.947539 390 7 0.898960 309 7 0.803850 129 7 1.000000 203 4 0.87222 33 6 0.845863 246 7 0.832905 412 7 0.794653 454 7 0.869618 394 7 0.9432000 391 7 0.955900 453 7 0.897439 435 7 0.963248 0.914804 0.931839 0.9465522 0.9791641 0.937216 0.9194984 0.962920 0.890407 0.9673002 0.930521 0.90684 0.9454003 0.900034 0.941556 0.887163 0.925713 0.918775 0.958942 0.961494 0.9841270 0.877042 0.935612 0.850888 0.88760 0.9385992 0.874890 0.9797513 0.958768 0.9597560 0.943271 0.947753 0.883776 0.757423 0.968787 0.866870 0.794557 0.803893 0.767239 0.853691 0.9408372 0.946343 0.89253 6 0.934908 0.935188 -0.0010110 7 0.942518 0.819592 0.1229256 4.7537e-01 0.483013 insignificant 1.000000 1 insignificant 0.3044603 0.3646899 insignificant 1 1.00000 insignificant 0.0255528 0.290888 insignificant 1 insignificant 0.934898 0.864763 0.0732191 7 0.934306 0.874759 0.0595476 1.4166e-04 8.2418e-01 weaklyHypermeth 2.8910e-03 1.0000e+00 weaklyHypermeth 3.2529e-02 6.1857e-01 weaklyHypermeth 5.7068e-01 1.0000e+00 insignificant 0.0480302 1.5875e-01 insignificant 1.0000e+00 insignificant 0.934898 0.888575 0.0446937 7 0.934306 0.893198 0.0411088 3.2762e-05 0.95709396 weaklyHypermeth 2.1841e-03 1.00000 weaklyHypermeth 4.3514e-04 9.5806e-01 weaklyHypermeth 3.3473e-02 1.000000 weaklyHypermeth 0.031502 3.5235e-01 insignificant 1.00000000 insignificant 0.934911 0.864865 0.068707 7 0.819592 0.890414 -0.0708215 1.8727e-02 9.9133e-01 weaklyHypermeth 2.7140e-01 1.0000e+00 insignificant 1.9768e-01 7.7001e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.022477 5.3546e-01 insignificant 1.00000000 insignificant 0.935465 0.888575 0.0437132 7 0.936677 0.893198 0.0434795 8.1097e-04 9.8323e-01 weaklyHypermeth 3.2439e-02 1.0000000 weaklyHypermeth 7.8800e-03 0.99779681 weaklyHypermeth 2.3879e-01 1.00000 insignificant 0.0059487 8.7139e-01 insignificant 1.00000000 insignificant 0.864763 0.888575 -0.03073873 7 0.874759 0.893198 -0.0184388 5.8722e-01 6.6110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0263e-01 8.6513e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0165286 6.9216e-01 insignificant 1.00000000 insignificant chr1 44563259 44564259 2107 ERI3 ENSG00000117419 0.817340 181 5 0.720513 120 5 0.602451 91 5 0.8391204 147 5 0.742993 63 3 0.74771 304 5 0.748381 78 3 0.778283 114 5 0.766340 81 3 0.834199 82 5 0.780584 148 5 1.000000 47 3 0.885534 98 5 1.000000 11 1 0.63356 86 3 0.4818627 56 3 0.9060606 66 3 0.871990 160 5 0.866146 95 5 0.803741 173 5 0.724327 51 3 0.850956 84 5 0.800609 110 5 0.839795 77 5 0.6927083 41 5 0.806656 154 5 0.81839 52 3 0.690476 55 3 0.783617 97 5 0.782713 144 5 0.845349 143 5 0.723136 285 5 0.828696 79 5 0.790179 89 5 0.710055 124 5 0.95048 60 3 0.806803 74 5 0.822216 176 5 0.855701 161 5 0.916087 189 5 0.9027864 123 5 0.758207 170 5 0.874089 163 5 0.859645 0.802679 0.834476 0.8831634 0.7381281 0.870391 0.8420939 0.841861 0.867779 0.9048881 0.826376 1.00000 0.9197753 0.942128 0.824345 0.766816 0.956856 0.880472 0.814488 0.848278 0.8821738 0.886317 0.865465 0.829278 0.95497 0.8521435 0.808130 0.8286355 0.825002 0.8570207 0.908190 0.877441 0.846917 0.824912 0.747766 0.953235 0.734700 0.858761 0.899126 0.925781 0.9454988 0.849942 0.92809 3 0.844162 0.853055 -0.0102283 5 0.781838 0.646503 0.1353348 5.4944e-01 0.526075 insignificant 1.000000 1 insignificant 0.7629682 0.4191522 insignificant 1 1.00000 insignificant 0.0114460 0.727602 lowCoverage 1 lowCoverage 0.844475 0.808970 0.0290419 5 0.822100 0.847221 -0.0251206 1.5518e-01 7.2138e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2889e-01 5.9149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0267306 5.3724e-01 lowCoverage 1.0000e+00 lowCoverage 0.844820 0.898263 -0.0548526 5 0.808084 0.871620 -0.0635363 9.9353e-01 0.00635313 weaklyHypometh 1.0000e+00 0.64782 insignificant 9.9663e-01 3.8553e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.070034 9.8531e-02 lowCoverage 1.00000000 lowCoverage 0.855039 0.808970 0.043681 5 0.738861 0.847221 -0.1083604 1.2217e-01 7.1361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5028e-01 8.3484e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.038177 3.1942e-01 lowCoverage 1.00000000 lowCoverage 0.856698 0.898263 -0.0445439 5 0.834405 0.871620 -0.0372148 9.2387e-01 2.6422e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.3063e-01 0.08370161 insignificant 1.0000e+00 1.00000 insignificant -0.0814799 4.0410e-02 lowCoverage 1.00000000 lowCoverage 0.808013 0.898263 -0.08512523 5 0.786109 0.871620 -0.0855103 9.9499e-01 4.4859e-03 weaklyHypometh 1.0000e+00 1.2817e-01 insignificant 9.7244e-01 1.1472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0433032 3.3217e-01 lowCoverage 1.00000000 lowCoverage chr1 44780846 44781846 2149 RNF220 ENSG00000187147 0.014089 614 11 0.020819 393 11 0.029121 550 11 0.0077759 575 11 0.054797 367 11 0.18292 631 11 0.011283 492 11 0.020629 553 11 0.015214 532 11 0.007931 638 11 0.060335 432 11 0.065505 419 11 0.087291 546 11 0.022556 271 7 0.10500 775 11 0.0042373 416 11 0.0058609 314 8 0.039392 750 11 0.012412 331 10 0.065332 576 12 0.012698 231 11 0.017950 432 11 0.068677 369 11 0.032242 255 11 0.0092908 307 11 0.013182 588 11 0.04516 482 11 0.039474 309 10 0.074278 387 11 0.014480 664 11 0.021780 574 11 0.024669 637 11 0.365042 308 11 0.375123 250 11 0.402760 441 10 0.44651 128 5 0.347059 176 11 0.467764 425 11 0.018455 655 11 0.034119 508 11 0.0063098 532 11 0.024772 663 11 0.047226 585 11 0.011835 0.010612 0.017911 0.0067632 0.0086388 0.022270 0.0053958 0.018922 0.012389 0.0075739 0.021143 0.01961 0.0078053 0.008936 0.012555 0.010365 0.014261 0.038614 0.013252 0.014292 0.0099134 0.015331 0.027398 0.022508 0.00884 0.0092015 0.013009 0.0053923 0.024433 0.0091305 0.011125 0.016787 0.358257 0.326029 0.427351 0.348521 0.410378 0.415439 0.015408 0.025546 0.0091322 0.034328 0.03752 11 0.016708 0.017400 0.0012084 11 0.090324 0.041226 0.0490975 2.3099e-01 0.882309 insignificant 1.000000 1 insignificant 0.1779250 0.9482705 insignificant 1 1.00000 insignificant 0.0104682 0.380171 insignificant 1 insignificant 0.016708 0.347801 -0.3327260 11 0.090324 0.338069 -0.2477453 9.9905e-01 1.6626e-55 hypomethylated 1.0000e+00 1.6626e-52 hypomethylated 9.9973e-01 3.5052e-25 hypomethylated 1.0000e+00 3.5052e-22 hypomethylated -0.3590838 2.5692e-07 hypomethylated 3.2115e-05 hypomethylated 0.016324 0.024125 -0.0115370 11 0.042295 0.026608 0.0156871 7.3311e-01 0.00128371 weaklyHypometh 1.0000e+00 0.25674 insignificant 8.9381e-01 7.1146e-03 weaklyHypometh 1.0000e+00 0.977670 insignificant 0.015449 2.1637e-01 insignificant 1.00000000 insignificant 0.017400 0.347801 -0.333830 11 0.041226 0.338069 -0.2968428 9.9994e-01 1.4310e-33 hypomethylated 1.0000e+00 1.4310e-30 hypomethylated 9.9999e-01 1.6114e-20 hypomethylated 1.0000e+00 1.6114e-17 hypomethylated -0.369552 1.6670e-06 hypomethylated 0.00020838 hypomethylated 0.017235 0.024125 -0.0119781 11 0.034245 0.026608 0.0076370 8.7064e-01 4.5948e-03 weaklyHypometh 1.0000e+00 0.6563992 insignificant 9.3459e-01 0.00549006 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.0049807 6.0622e-01 insignificant 1.00000000 insignificant 0.348002 0.024125 0.32384100 11 0.366242 0.026608 0.3396333 2.6448e-14 1.0000e+00 hypermethylated 6.6119e-12 1.0000e+00 hypermethylated 6.4981e-11 1.0000e+00 hypermethylated 6.4981e-08 1.0000e+00 hypermethylated 0.3745327 1.2894e-06 hypermethylated 0.00064468 hypermethylated chr1 46491002 46492002 2258 RAD54L ENSG00000085999 0.880403 206 8 0.810314 163 9 0.734524 101 8 0.9185381 246 6 0.721472 115 6 0.84535 212 8 0.743511 113 10 0.789651 170 9 0.735744 98 7 0.623385 69 5 0.788747 284 9 0.687951 61 4 0.728000 102 8 0.804145 79 8 0.73202 134 8 0.5131788 58 5 0.6771297 213 5 0.758552 118 8 0.781710 125 7 0.803340 182 6 0.827201 44 3 0.794444 47 2 0.853572 111 8 0.763090 78 8 0.8222543 119 7 0.894140 178 8 0.91591 103 8 0.813889 48 3 0.812304 124 10 0.833131 166 8 0.840657 165 9 0.654472 230 7 0.781471 143 10 0.754103 148 8 0.747556 84 5 0.85714 37 3 0.860171 100 4 0.769624 186 8 0.805224 174 9 0.840071 247 8 0.7809065 202 8 0.729953 95 7 0.801632 254 8 0.927493 0.923927 0.852022 0.9514589 0.7601212 0.909466 0.8734282 0.897287 0.835803 0.7333574 0.903539 0.88142 0.8957275 0.860889 0.878903 0.756909 0.896869 0.828083 0.925043 0.941170 0.9226563 0.945501 0.873038 0.837379 0.92633 0.9481199 0.887312 0.9372940 0.881986 0.9197936 0.941736 0.883643 0.884524 0.894566 0.816258 0.987837 0.842611 0.888165 0.937589 0.965625 0.9392403 0.923933 0.89830 2 0.857845 0.878465 -0.0222667 7 0.773935 0.807478 -0.0335432 9.7687e-01 0.023424 weaklyHypometh 1.000000 1 insignificant 0.9999506 0.0022120 weaklyHypometh 1 0.57091 insignificant -0.0648718 0.025756 weaklyHypometh 1 insignificant 0.857845 0.856734 0.0009773 6 0.773935 0.786506 -0.0125709 8.6603e-01 5.8464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8325e-01 2.8343e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0411279 1.7283e-01 insignificant 1.0000e+00 insignificant 0.857845 0.913580 -0.0321309 8 0.773935 0.777842 -0.0039074 9.1922e-01 0.20112709 insignificant 1.0000e+00 1.00000 insignificant 9.2065e-01 2.0965e-01 insignificant 1.0000e+00 1.000000 insignificant -0.037674 1.8222e-01 insignificant 1.00000000 insignificant 0.878465 0.856734 0.023415 6 0.807478 0.786506 0.0209722 2.1878e-01 9.2645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2838e-01 9.6364e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.023744 4.1401e-01 insignificant 1.00000000 insignificant 0.878465 0.913580 -0.0153017 6 0.807478 0.777842 0.0296357 3.9210e-01 3.0617e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.4171e-01 0.63700357 insignificant 1.0000e+00 1.00000 insignificant 0.0271980 3.2043e-01 insignificant 1.00000000 insignificant 0.856734 0.913580 -0.03668960 6 0.786506 0.777842 0.0086635 7.5626e-01 4.8000e-02 weaklyHypometh 1.0000e+00 8.4019e-01 insignificant 6.1902e-01 6.6793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0034541 9.0280e-01 insignificant 1.00000000 insignificant chr1 46757930 46758930 2276 DMBX1 ENSG00000197587 0.675578 120 6 0.618168 116 9 0.663658 140 9 0.7993840 184 9 0.746208 108 9 0.76117 244 9 0.830221 181 9 0.711893 158 9 0.760250 127 9 0.650463 74 9 0.780523 278 9 0.707744 84 8 0.714527 104 5 0.820238 56 6 0.78064 105 7 0.8200000 76 3 0.6642157 50 3 0.762963 68 6 0.795833 90 5 0.760774 115 9 0.955556 37 5 0.269231 43 3 0.846829 102 9 0.760935 82 9 0.6957957 108 5 0.669770 220 9 0.70516 92 8 0.424398 62 6 0.685069 97 7 0.674697 181 9 0.738403 199 9 0.688215 186 9 0.600716 165 9 0.639506 103 6 0.580247 251 9 0.46296 54 5 0.597994 160 8 0.614907 157 9 0.688848 221 9 0.631402 153 9 0.6662101 170 9 0.715741 84 6 0.700512 174 9 0.697738 0.596752 0.617860 0.8124318 0.7171347 0.759220 0.8143168 0.704402 0.746992 0.6166132 0.766875 0.72685 0.6897627 0.725383 0.761529 0.823333 0.756487 0.738248 0.786779 0.747255 0.9358974 0.393651 0.815815 0.744541 0.68439 0.6361739 0.689179 0.4519545 0.676386 0.6561691 0.725117 0.695254 0.525221 0.577813 0.484330 0.335470 0.529893 0.537927 0.685154 0.680289 0.6766671 0.700481 0.68850 0 0.758676 0.684883 0.0541206 9 0.750664 0.699426 0.0512384 7.1515e-03 0.994364 weaklyHypermeth 1.000000 1 insignificant 0.0970139 0.9759533 insignificant 1 1.00000 insignificant 0.0650510 0.244190 insignificant 1 insignificant 0.758676 0.649438 0.1517714 9 0.750664 0.592506 0.1581583 1.6253e-20 6.0300e-04 weaklyHypermeth 1.6253e-18 5.0250e-02 weaklyHypermeth 1.6408e-07 2.1758e-03 weaklyHypermeth 1.6408e-05 2.7197e-01 weaklyHypermeth 0.1585002 5.1007e-04 weaklyHypermeth 2.4289e-02 weaklyHypermeth 0.758676 0.715356 0.0562135 9 0.750664 0.687229 0.0634360 1.7490e-03 0.92153020 weaklyHypermeth 5.6420e-02 1.00000 weaklyHypermeth 5.1675e-03 8.6651e-01 weaklyHypermeth 1.6669e-01 1.000000 insignificant 0.060680 1.0895e-02 weaklyHypermeth 0.41511726 insignificant 0.684883 0.649438 0.124125 9 0.699426 0.592506 0.1069199 3.4812e-10 9.6862e-03 weaklyHypermeth 1.7406e-08 6.9187e-01 weaklyHypermeth 2.8296e-05 4.4764e-02 weaklyHypermeth 1.4893e-03 1.0000e+00 weaklyHypermeth 0.093449 1.2355e-01 insignificant 1.00000000 insignificant 0.684883 0.715356 0.0071044 9 0.699426 0.687229 0.0121976 4.7089e-01 2.4658e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.0167e-01 0.50639398 insignificant 1.0000e+00 1.00000 insignificant -0.0043711 9.3612e-01 insignificant 1.00000000 insignificant 0.649438 0.715356 -0.03960284 9 0.592506 0.687229 -0.0947223 1.4552e-05 2.1428e-12 weaklyHypometh 1.4552e-03 4.2857e-10 weaklyHypometh 3.0078e-03 4.4248e-05 weaklyHypometh 3.6292e-01 1.1953e-02 weaklyHypometh -0.0978202 1.0462e-02 weaklyHypometh 0.35627143 insignificant chr1 47650439 47651439 2312 CMPK1 ENSG00000162368 0.779930 228 7 0.632230 147 8 0.675471 177 7 0.6451870 258 8 0.617013 147 5 0.73882 199 7 0.658121 173 5 0.848152 175 8 0.765232 236 5 0.631464 253 7 0.696400 238 8 0.851918 152 3 0.687979 253 7 0.823214 140 7 0.80506 329 7 0.8266667 92 3 0.6204082 40 3 0.546711 405 7 0.890504 203 7 0.606389 174 7 0.848016 81 7 0.556434 177 7 0.700372 148 7 0.644444 44 5 0.7177955 122 7 0.760143 281 8 0.82783 170 7 0.826705 121 3 0.717872 236 8 0.901408 288 8 0.728919 272 8 0.916631 218 7 0.844863 212 8 0.818865 208 8 1.000000 91 5 0.79274 65 5 0.809140 113 8 0.871196 276 8 0.467088 284 8 0.413961 295 8 0.3074063 311 8 0.498331 384 8 0.443152 219 7 0.868481 0.908741 0.900962 0.7447350 0.7521184 0.786168 0.8427945 0.871725 0.803369 0.8471777 0.772706 0.85967 0.7788961 0.834411 0.829486 0.746743 0.807677 0.768203 0.856109 0.696473 0.9158149 0.581679 0.790096 0.814727 0.87851 0.8963830 0.810181 0.7101112 0.791647 0.9073266 0.897353 0.894975 0.921967 0.861078 1.000000 0.967138 0.953523 0.954414 0.564522 0.549080 0.3792467 0.695134 0.54265 3 0.790993 0.817549 -0.0326666 7 0.566359 0.703382 -0.1370229 9.9751e-01 0.012583 weaklyHypometh 1.000000 1 insignificant 0.9955097 0.1153739 insignificant 1 1.00000 insignificant -0.0448705 0.249627 insignificant 1 insignificant 0.791532 0.893264 -0.1180035 7 0.655180 0.805382 -0.1502023 1.0000e+00 5.7396e-10 weaklyHypometh 1.0000e+00 1.1479e-07 weaklyHypometh 1.0000e+00 2.8927e-07 weaklyHypometh 1.0000e+00 1.4464e-04 weaklyHypometh -0.1387894 4.0070e-03 weaklyHypometh 1.2937e-01 insignificant 0.791532 0.457468 0.3018204 7 0.655180 0.475150 0.1800301 5.5651e-29 0.80423730 hypermethylated 1.3913e-26 1.00000 hypermethylated 1.7301e-12 9.8030e-01 hypermethylated 4.3252e-10 1.000000 hypermethylated 0.291356 6.9145e-05 hypermethylated 0.00864307 hypermethylated 0.817674 0.893264 -0.080509 7 0.748578 0.805382 -0.0568039 9.9354e-01 1.9909e-03 weaklyHypometh 1.0000e+00 2.4886e-01 insignificant 9.9956e-01 1.4790e-04 weaklyHypometh 1.0000e+00 3.6976e-02 weaklyHypometh -0.093919 4.9338e-02 weaklyHypometh 0.89705396 insignificant 0.817674 0.457468 0.3487311 7 0.748578 0.475150 0.2734285 1.2336e-24 9.9941e-01 hypermethylated 6.1678e-22 1.0000000 hypermethylated 1.4106e-12 0.99987784 hypermethylated 7.0532e-10 1.00000 hypermethylated 0.3362267 1.1937e-05 hypermethylated 0.00596846 hypermethylated 0.893264 0.457468 0.42843032 8 0.805382 0.475150 0.3302324 1.8018e-20 9.9989e-01 hypermethylated 1.8018e-17 1.0000e+00 hypermethylated 2.0656e-09 1.0000e+00 hypermethylated 1.0328e-06 1.0000e+00 hypermethylated 0.4301456 6.3871e-06 hypermethylated 0.00113784 hypermethylated chr1 47816640 47817640 2327 ENSG00000216700 0.559383 151 8 0.527334 182 9 0.440241 211 9 0.5951389 116 7 0.727681 88 9 0.71799 246 8 0.485230 107 9 0.464193 248 9 0.484066 207 9 0.720313 162 9 0.710926 279 9 0.453602 102 8 0.261580 272 9 0.597509 87 7 0.45817 250 9 0.5649351 94 8 0.0895136 67 4 0.417719 112 7 0.491660 171 9 0.508326 183 8 0.797095 85 5 0.115304 138 8 0.653828 111 8 0.730159 125 7 0.5940490 88 7 0.448916 249 9 0.37117 192 8 0.764085 102 8 0.589744 202 9 0.413031 337 9 0.348448 321 9 0.698943 193 8 0.033889 267 9 0.040741 112 6 0.170833 313 6 0.18452 33 3 0.123314 188 8 0.071320 299 9 0.204364 169 9 0.357392 117 9 0.1722222 71 7 0.106061 84 5 0.231750 132 8 0.613742 0.521158 0.426710 0.6152146 0.7099904 0.679836 0.5091492 0.470360 0.488196 0.7618621 0.711693 0.40918 0.2621553 0.588204 0.401216 0.552327 0.107032 0.364031 0.440511 0.461914 0.8268856 0.128586 0.659893 0.661063 0.64194 0.4390084 0.439156 0.7074477 0.580637 0.4282078 0.376483 0.711515 0.020995 0.039773 0.115909 0.062934 0.130412 0.063357 0.175650 0.281974 0.1212121 0.080808 0.33654 3 0.518441 0.501867 0.0132254 9 0.521958 0.485530 0.0364278 1.9758e-01 0.910801 insignificant 1.000000 1 insignificant 0.9072402 0.2076893 insignificant 1 1.00000 insignificant -0.0299556 0.668269 insignificant 1 insignificant 0.518441 0.065397 0.4532237 9 0.521958 0.066263 0.4556947 3.6474e-34 1.0000e+00 hypermethylated 9.1185e-32 1.0000e+00 hypermethylated 2.7064e-16 1.0000e+00 hypermethylated 2.7064e-13 1.0000e+00 hypermethylated 0.4096720 6.9565e-09 hypermethylated 1.3913e-06 hypermethylated 0.518441 0.216405 0.3065690 8 0.521958 0.245144 0.2768141 8.1115e-16 0.99993769 hypermethylated 1.6223e-13 1.00000 hypermethylated 1.0587e-10 1.0000e+00 hypermethylated 2.1174e-08 1.000000 hypermethylated 0.299418 2.0904e-04 hypermethylated 0.01900370 hypermethylated 0.502100 0.066832 0.437079 9 0.536977 0.109637 0.4273402 7.8438e-22 1.0000e+00 hypermethylated 1.3073e-19 1.0000e+00 hypermethylated 3.5083e-15 1.0000e+00 hypermethylated 3.5083e-12 1.0000e+00 hypermethylated 0.439628 7.5526e-06 hypermethylated 0.00062939 hypermethylated 0.501867 0.216405 0.3033189 8 0.485530 0.245144 0.2403863 4.1686e-10 9.9919e-01 hypermethylated 5.9551e-08 1.0000000 hypermethylated 3.4286e-10 0.99999999 hypermethylated 8.5716e-08 1.00000 hypermethylated 0.3293733 4.0364e-04 hypermethylated 0.06727266 hypermethylated 0.065397 0.216405 -0.15239254 8 0.066263 0.245144 -0.1788806 1.0000e+00 1.3431e-07 weaklyHypometh 1.0000e+00 1.6788e-05 weaklyHypometh 9.9999e-01 4.9471e-04 weaklyHypometh 1.0000e+00 4.5330e-02 weaklyHypometh -0.1102543 6.0160e-02 insignificant 1.00000000 insignificant chr1 47865784 47866784 2333 ENSG00000221447 0.677411 149 6 0.616071 46 5 0.368254 27 3 0.7407689 114 6 1.000000 8 1 0.86230 161 6 0.583333 20 0 0.828689 93 6 0.438889 32 3 0.604167 17 2 0.831174 122 6 0.666667 3 0 0.874293 100 6 0.878307 33 3 0.73426 32 4 NA 0 0 NA 0 0 0.556070 163 6 0.845566 70 6 0.668771 90 6 0.703571 38 5 0.482341 65 6 0.490079 30 3 0.716667 25 4 0.6774273 102 6 0.835754 163 6 0.56667 24 3 0.625000 9 0 0.774679 126 6 0.736561 155 6 0.780392 112 6 0.781330 107 6 0.492063 52 6 0.598632 69 6 0.666667 22 2 0.31633 33 4 0.706349 38 5 0.394206 155 6 0.405411 133 6 0.391534 98 6 0.5596522 83 6 0.434091 147 6 0.515275 103 6 0.814978 0.697531 0.341799 0.7785243 0.9483586 0.879380 0.7962963 0.783959 0.635802 0.6166667 0.833791 0.54095 0.8037788 0.857143 0.787654 NA NA 0.553338 0.875439 0.816651 0.7706790 0.461243 0.765873 0.688889 0.83297 0.7700531 0.740741 0.9369655 0.901425 0.7381927 0.677366 0.850024 0.721340 0.610949 0.730920 0.402116 0.788360 0.389347 0.398148 0.334907 0.4190087 0.439899 0.43040 0 0.748437 0.774059 -0.0401793 6 0.803765 0.632237 0.1715282 8.5275e-01 0.226845 insignificant 1.000000 1 insignificant 0.6578904 0.7369403 insignificant 1 1.00000 insignificant 0.0288493 0.580151 lowCoverage 1 lowCoverage 0.748044 0.493225 0.2197137 6 0.775731 0.435043 0.3406884 3.8619e-06 1.0000e+00 hypermethylated 9.6549e-05 1.0000e+00 hypermethylated 7.1381e-03 9.9904e-01 weaklyHypermeth 1.7410e-01 1.0000e+00 insignificant 0.1806811 3.7518e-02 lowCoverage 6.8214e-01 lowCoverage 0.747847 0.437943 0.3069970 6 0.738353 0.460654 0.2776993 1.7622e-11 0.99999959 hypermethylated 2.5174e-09 1.00000 hypermethylated 3.4892e-06 9.9980e-01 hypermethylated 4.9846e-04 1.000000 hypermethylated 0.248529 1.6704e-04 lowCoverage 0.01790279 lowCoverage 0.774869 0.493225 0.277518 6 0.722556 0.435043 0.2875133 2.0646e-07 1.0000e+00 hypermethylated 7.3736e-06 1.0000e+00 hypermethylated 4.0094e-03 9.9912e-01 weaklyHypermeth 1.0120e-01 1.0000e+00 insignificant 0.151832 6.7170e-02 lowCoverage 1.00000000 lowCoverage 0.776842 0.437943 0.3442889 6 0.776316 0.460654 0.3156617 2.9680e-12 1.0000e+00 hypermethylated 4.9467e-10 1.0000000 hypermethylated 6.3553e-07 0.99998391 hypermethylated 1.0592e-04 1.00000 hypermethylated 0.2196796 5.2063e-04 lowCoverage 0.07437616 lowCoverage 0.495913 0.437943 0.08177365 6 0.507550 0.460654 0.0468962 6.3380e-02 2.2976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6304e-01 3.2670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0678479 3.7072e-01 lowCoverage 1.00000000 lowCoverage chr1 47925645 47926645 2343 ENSG00000221447 0.487470 164 5 0.333632 106 5 0.457576 77 5 0.4794201 144 5 0.502614 64 5 0.57482 222 5 0.422404 117 5 0.455918 79 5 0.339881 82 5 0.702778 41 5 0.552256 130 5 0.410000 41 2 0.382751 65 3 0.254167 23 3 0.43393 70 3 0.5333333 7 0 0.2678571 17 2 0.380528 138 5 0.686111 68 5 0.397846 158 5 0.286111 33 5 0.668103 62 2 0.552412 102 5 0.342324 59 5 0.3000000 45 2 0.463333 120 5 0.30815 93 5 0.389205 39 3 0.375346 54 4 0.406708 147 5 0.406687 170 5 0.574020 212 5 0.589177 106 5 0.506192 99 5 0.697669 177 3 0.14583 33 2 0.461607 84 4 0.308503 159 5 0.303128 216 5 0.487170 183 5 0.3090404 133 5 0.354015 151 3 0.334599 189 5 0.558190 0.405406 0.642358 0.5861588 0.6870287 0.786992 0.6971765 0.596592 0.408000 0.7847985 0.640493 0.53370 0.5435590 0.602392 0.605992 0.725275 0.461718 0.515679 0.698718 0.484872 0.4256410 0.590569 0.653641 0.630216 0.52805 0.5711788 0.561969 0.7027972 0.463589 0.5309768 0.510256 0.684669 0.452024 0.326413 0.351452 0.401744 0.523836 0.196628 0.504415 0.567374 0.3914252 0.464565 0.47815 2 0.557395 0.495154 0.0231428 5 0.306023 0.315279 -0.0092560 7.7119e-01 0.969266 insignificant 1.000000 1 insignificant 0.9226832 0.9313855 insignificant 1 1.00000 insignificant 0.0300642 0.498564 lowCoverage 1 lowCoverage 0.558011 0.486322 0.0632976 5 0.344276 0.348803 -0.0045267 6.5868e-10 2.5677e-06 weaklyHypermeth 2.7445e-08 3.6682e-04 weaklyHypermeth 1.0535e-02 4.5511e-03 weaklyHypermeth 2.4501e-01 4.2063e-01 insignificant 0.0012675 9.8860e-01 lowCoverage 1.0000e+00 lowCoverage 0.557395 0.458716 0.1310930 5 0.306023 0.261762 0.0442610 1.1765e-02 0.99936877 weaklyHypermeth 2.6739e-01 1.00000 insignificant 2.1606e-02 9.9982e-01 weaklyHypermeth 5.2699e-01 1.000000 insignificant 0.095174 5.1509e-02 lowCoverage 1.00000000 lowCoverage 0.496028 0.486322 -0.028599 5 0.354689 0.348803 0.0058863 1.8666e-08 4.1836e-06 weaklyHypometh 7.7775e-07 1.0459e-03 weaklyHypometh 1.9446e-02 1.9425e-02 weaklyHypometh 3.8551e-01 1.0000e+00 insignificant -0.028797 7.5334e-01 lowCoverage 1.00000000 lowCoverage 0.495154 0.458716 0.1052378 5 0.315279 0.261762 0.0535170 3.3735e-02 9.9649e-01 weaklyHypermeth 5.3547e-01 1.0000000 insignificant 1.7647e-02 0.99963247 weaklyHypermeth 4.1148e-01 1.00000 insignificant 0.0651100 2.0266e-01 lowCoverage 1.00000000 lowCoverage 0.486322 0.459242 0.16761813 5 0.348803 0.294482 0.0543203 1.2556e-03 2.7307e-04 weaklyHypermeth 8.9689e-02 1.2412e-02 weaklyHypermeth 6.4174e-02 1.3648e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0939067 3.2147e-01 lowCoverage 1.00000000 lowCoverage chr1 48013003 48014003 2354 ENSG00000221447 0.838294 448 10 0.747980 266 10 0.877399 228 10 0.8784250 372 10 0.795577 144 8 0.80697 540 10 0.733074 90 5 0.824809 287 11 0.904548 189 10 0.869891 249 8 0.832120 401 10 0.684722 52 6 0.907119 285 10 0.891491 173 10 0.87132 200 8 0.8888889 26 1 0.0000000 1 0 0.738659 479 8 0.824991 615 10 0.879715 417 10 0.782883 120 8 0.758695 150 9 0.750021 144 6 0.674837 107 8 0.7320924 153 8 0.876109 391 10 0.65615 274 11 0.612245 63 5 0.881748 572 10 0.922169 398 10 0.784925 415 10 0.906781 405 10 0.386320 140 8 0.523670 349 8 0.799605 343 6 0.73718 69 4 0.477695 207 10 0.404529 661 10 0.867832 217 8 0.947073 405 10 0.9596226 431 8 0.856333 592 7 0.816450 205 8 0.839817 0.802319 0.809645 0.8620226 0.8225585 0.867192 0.8146433 0.891521 0.897014 0.9084879 0.892254 0.71381 0.8748695 0.846062 0.816927 0.811388 NA 0.856690 0.858778 0.913400 0.8265951 0.864407 0.928208 0.972377 0.85446 0.8918532 0.869232 0.6965837 0.864636 0.8700691 0.887006 0.882488 0.487650 0.593559 0.697133 0.627343 0.695115 0.220836 0.931256 0.906546 0.9251650 0.884785 0.94484 5 0.875320 0.886905 -0.0162033 10 0.776413 0.741069 0.0353434 8.6028e-01 0.369355 insignificant 1.000000 1 insignificant 0.9450964 0.4285748 insignificant 1 1.00000 insignificant 0.0115786 0.828094 insignificant 1 insignificant 0.875550 0.482759 0.3891452 10 0.783272 0.364117 0.4191543 7.4512e-34 1.0000e+00 hypermethylated 1.4902e-31 1.0000e+00 hypermethylated 2.5320e-10 1.0000e+00 hypermethylated 6.3299e-08 1.0000e+00 hypermethylated 0.2349658 1.9762e-02 weaklyHypermeth 4.2960e-01 insignificant 0.875986 0.923784 -0.0454634 8 0.799930 0.749776 0.0501536 9.3914e-01 0.00014910 weaklyHypometh 1.0000e+00 0.12685 insignificant 9.6886e-01 3.0755e-05 weaklyHypometh 1.0000e+00 0.030755 weaklyHypometh -0.099662 6.7972e-02 insignificant 1.00000000 insignificant 0.888296 0.482759 0.402918 10 0.787386 0.364117 0.4232687 9.6751e-26 1.0000e+00 hypermethylated 2.4188e-23 1.0000e+00 hypermethylated 6.3485e-10 1.0000e+00 hypermethylated 3.1742e-07 1.0000e+00 hypermethylated 0.223387 2.3568e-02 weaklyHypermeth 0.52374093 insignificant 0.888644 0.923784 -0.0306736 8 0.755992 0.749776 0.0062163 8.4689e-01 3.8134e-03 weaklyHypometh 1.0000e+00 0.6355597 insignificant 9.6365e-01 0.01551116 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.1112410 1.6690e-02 weaklyHypometh 0.64471827 insignificant 0.484402 0.924283 -0.44109770 8 0.448145 0.807451 -0.3593066 1.0000e+00 2.4396e-14 hypomethylated 1.0000e+00 6.0991e-12 hypomethylated 1.0000e+00 2.3452e-08 hypomethylated 1.0000e+00 2.3452e-05 hypomethylated -0.3346283 3.8805e-03 weaklyHypometh 0.18478371 insignificant chr1 48125759 48126759 2365 ENSG00000204018 0.590514 166 5 0.349478 71 3 0.247863 33 3 0.6304132 157 5 0.174603 34 3 0.70931 162 5 0.287037 33 3 0.232150 56 3 0.280808 82 3 0.517172 52 3 0.447552 94 3 0.380952 35 3 0.323097 120 3 0.369963 41 3 0.35714 66 3 0.1072125 47 3 0.1575758 27 3 0.437422 230 5 0.663267 160 5 0.638416 124 3 0.703704 29 3 0.365196 39 3 0.706553 33 3 0.559048 53 3 0.4523810 18 2 0.680190 158 5 0.34091 27 3 0.488095 21 1 0.435392 138 3 0.463140 178 5 0.753401 172 5 0.728818 129 5 0.360708 94 3 0.288807 45 3 0.500000 84 2 0.23936 116 4 0.500764 53 3 0.120704 178 6 0.583375 156 5 0.657182 115 5 0.6237041 173 4 0.468741 143 5 0.518338 156 6 0.380675 0.325017 0.220374 0.4206620 0.1724582 0.524710 0.2372372 0.214263 0.267322 0.4859951 0.424016 0.33784 0.3079707 0.348381 0.335313 0.115379 0.149877 0.410637 0.444675 0.359304 0.6846847 0.338434 0.413028 0.578764 0.44788 0.5644703 0.320025 0.4971042 0.406108 0.2277407 0.516228 0.560791 0.358754 0.268051 NA 0.204215 0.492965 0.043714 0.281978 0.514699 0.4995733 0.307756 0.40975 3 0.400559 0.504523 -0.0775714 5 0.608531 0.677396 -0.0688644 9.9814e-01 0.026582 weaklyHypometh 1.000000 1 insignificant 0.9991409 0.0145535 weaklyHypometh 1 1.00000 insignificant -0.1613046 0.011264 lowCoverage 1 lowCoverage 0.400559 0.280702 0.2007767 5 0.608531 0.269789 0.3387423 2.6789e-04 9.9860e-01 hypermethylated 5.1517e-03 1.0000e+00 hypermethylated 3.4051e-02 9.5596e-01 weaklyHypermeth 5.8709e-01 1.0000e+00 insignificant 0.0600402 4.3201e-01 lowCoverage 1.0000e+00 lowCoverage 0.400559 0.504711 -0.0302247 5 0.608531 0.555077 0.0534544 1.3994e-01 0.34464654 insignificant 1.0000e+00 1.00000 insignificant 2.4314e-01 4.0607e-01 insignificant 1.0000e+00 1.000000 insignificant -0.175171 4.3551e-03 lowCoverage 0.18935422 lowCoverage 0.504523 0.280702 0.279967 5 0.677396 0.269789 0.4076067 7.5577e-05 9.9999e-01 hypermethylated 1.9379e-03 1.0000e+00 hypermethylated 4.0478e-03 9.9995e-01 weaklyHypermeth 1.0120e-01 1.0000e+00 insignificant 0.221345 1.4425e-02 lowCoverage 0.38987438 lowCoverage 0.504523 0.504711 0.0592682 5 0.677396 0.555077 0.1223187 2.5765e-02 9.9786e-01 weaklyHypermeth 4.3669e-01 1.0000000 insignificant 3.0335e-02 0.99806839 weaklyHypermeth 5.7412e-01 1.00000 insignificant -0.0138659 8.0611e-01 lowCoverage 1.00000000 lowCoverage 0.280702 0.504711 -0.27908193 5 0.269789 0.555077 -0.2852880 9.9788e-01 7.6779e-03 weaklyHypometh 1.0000e+00 2.0205e-01 insignificant 9.9916e-01 6.0618e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.2352107 1.0688e-02 lowCoverage 0.35627143 lowCoverage chr1 48144555 48145555 2369 ENSG00000204018 0.764025 203 6 0.597448 159 7 0.727619 76 5 0.8336414 83 6 0.743537 38 2 0.82603 141 7 0.780087 42 2 0.906463 98 7 0.877438 78 5 0.833333 53 2 0.844454 222 8 0.909524 30 2 0.712493 137 5 1.000000 3 0 0.67588 62 5 0.7928571 36 3 0.4108947 42 3 0.558617 224 5 0.776125 133 5 0.811764 143 6 0.897629 68 2 0.255181 72 5 0.742488 77 3 0.907143 50 5 0.6597396 100 6 0.840452 231 7 0.74037 77 5 0.888889 29 2 0.906349 106 6 0.861970 231 7 0.855850 211 8 0.826229 161 7 0.456344 182 8 0.339317 151 6 0.476852 143 3 0.15451 73 4 0.681444 61 5 0.080657 274 8 0.138525 300 7 0.258746 251 6 0.1640643 180 6 0.054805 245 5 0.282241 244 7 0.733894 0.698816 0.701613 0.8138699 0.8294931 0.869772 0.7226295 0.879128 0.826293 0.9274194 0.849168 0.80165 0.7781271 NA 0.824597 0.893088 0.716590 0.496478 0.952528 0.859027 0.9498053 0.062108 0.901714 0.956989 0.72985 0.8946002 0.865172 0.8744724 0.840054 0.9390856 0.828164 0.864074 0.211273 0.186669 NA 0.184036 0.654779 0.021715 0.094981 0.271876 0.2615423 0.111956 0.29063 2 0.753869 0.820948 -0.0599280 5 0.764425 0.795396 -0.0309709 9.3205e-01 0.106793 insignificant 1.000000 1 insignificant 0.6538356 0.3870134 insignificant 1 1.00000 insignificant -0.0127458 0.836128 lowCoverage 1 lowCoverage 0.753869 0.244344 0.5122463 5 0.764425 0.358925 0.4055002 8.8495e-24 1.0000e+00 hypermethylated 1.2642e-21 1.0000e+00 hypermethylated 2.2032e-09 1.0000e+00 hypermethylated 3.6719e-07 1.0000e+00 hypermethylated 0.4042572 5.2311e-03 lowCoverage 1.5386e-01 lowCoverage 0.751140 0.165574 0.5689399 5 0.740295 0.200768 0.5395269 2.3187e-34 1.00000000 hypermethylated 1.1594e-31 1.00000 hypermethylated 1.3677e-12 1.0000e+00 hypermethylated 4.3252e-10 1.000000 hypermethylated 0.589435 1.3586e-06 lowCoverage 0.00067931 lowCoverage 0.820948 0.244344 0.579690 6 0.795396 0.358925 0.4364711 3.8334e-19 1.0000e+00 hypermethylated 4.7918e-17 1.0000e+00 hypermethylated 1.1287e-07 1.0000e+00 hypermethylated 2.2575e-05 1.0000e+00 hypermethylated 0.417003 3.6137e-03 weaklyHypermeth 0.11727789 insignificant 0.819648 0.165574 0.6283631 6 0.786575 0.200768 0.5858066 2.0082e-30 1.0000e+00 hypermethylated 2.0082e-27 1.0000000 hypermethylated 9.4318e-12 1.00000000 hypermethylated 3.1439e-09 1.00000 hypermethylated 0.6021811 3.4048e-07 hypermethylated 0.00034048 hypermethylated 0.232288 0.165574 0.03156901 6 0.310821 0.200768 0.1100526 1.1247e-01 5.8391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4439e-01 9.0806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1851782 1.0610e-01 insignificant 1.00000000 insignificant chr1 50513619 50514619 2625 ELAVL4 ENSG00000162374 0.160273 221 6 0.089333 262 6 0.119291 238 6 0.1971676 149 3 0.078283 120 6 0.21011 340 6 0.162488 201 6 0.130180 246 6 0.093284 281 6 0.113671 234 6 0.235552 196 6 0.117946 163 6 0.048966 213 6 0.207769 91 3 0.20748 226 6 0.2686869 59 4 0.1130952 115 6 0.165408 163 3 0.211310 104 3 0.723451 267 6 0.116017 81 6 0.013764 135 6 0.177876 150 6 0.215915 135 3 0.1350198 56 5 0.210666 294 6 0.12247 159 6 0.189268 85 3 0.241283 132 6 0.108530 316 6 0.186083 247 6 0.172011 309 6 0.010585 238 6 0.012209 89 3 0.066667 168 5 0.00000 56 4 0.030534 149 6 0.018495 240 6 0.038856 241 6 0.033250 185 6 0.1111800 123 3 0.028828 172 6 0.231948 129 6 0.152595 0.053611 0.145601 0.1544785 0.0930177 0.195941 0.1888544 0.130466 0.096242 0.1313178 0.241989 0.12696 0.0532870 0.195769 0.176794 0.381134 0.107028 0.202643 0.209313 0.676508 0.0873621 0.023859 0.099250 0.202947 0.18245 0.1548221 0.120586 0.0843500 0.206835 0.1327792 0.168092 0.188123 0.003073 0.021125 0.020195 0.000000 0.030098 0.015069 0.062520 0.028211 0.1086128 0.048085 0.18711 3 0.178709 0.141496 0.0357964 6 0.183924 0.151357 0.0325670 1.1994e-01 0.960002 insignificant 1.000000 1 insignificant 0.2175645 0.8468463 insignificant 1 1.00000 insignificant 0.0252787 0.489178 insignificant 1 insignificant 0.178709 0.018085 0.1603491 6 0.183924 0.022707 0.1612174 3.1592e-06 1.0000e+00 weaklyHypermeth 8.3138e-05 1.0000e+00 weaklyHypermeth 2.2909e-10 1.0000e+00 weaklyHypermeth 6.3299e-08 1.0000e+00 weaklyHypermeth 0.1596056 7.2104e-05 weaklyHypermeth 4.6282e-03 weaklyHypermeth 0.178709 0.074118 0.0963338 6 0.183924 0.081598 0.1023258 8.5268e-03 0.99955028 weaklyHypermeth 2.0302e-01 1.00000 insignificant 5.5565e-04 9.9989e-01 weaklyHypermeth 3.4728e-02 1.000000 weaklyHypermeth 0.093875 8.9310e-02 insignificant 1.00000000 insignificant 0.141496 0.018085 0.125495 6 0.151357 0.022707 0.1286504 1.8633e-09 1.0000e+00 weaklyHypermeth 8.4696e-08 1.0000e+00 weaklyHypermeth 1.3629e-07 1.0000e+00 weaklyHypermeth 2.2715e-05 1.0000e+00 weaklyHypermeth 0.134327 7.1227e-06 weaklyHypermeth 0.00062939 weaklyHypermeth 0.141496 0.074118 0.0581924 6 0.151357 0.081598 0.0697588 2.9340e-03 9.9228e-01 weaklyHypermeth 8.6293e-02 1.0000000 weaklyHypermeth 1.3430e-02 0.99771758 weaklyHypermeth 3.6538e-01 1.00000 insignificant 0.0685961 1.6164e-01 insignificant 1.00000000 insignificant 0.018085 0.074118 -0.06470997 6 0.022707 0.081598 -0.0588916 9.9919e-01 2.1921e-04 weaklyHypometh 1.0000e+00 1.0438e-02 weaklyHypometh 9.9324e-01 1.8008e-03 weaklyHypometh 1.0000e+00 1.1130e-01 insignificant -0.0657307 1.6793e-01 insignificant 1.00000000 insignificant chr1 52526807 52527807 2741 ENSG00000213735 0.922436 157 5 0.824828 103 5 0.850000 30 2 0.8889156 151 5 0.744662 50 3 0.82424 250 5 0.763889 55 5 0.641086 104 5 0.797619 48 5 0.880000 17 3 0.720524 126 5 1.000000 8 0 0.897294 68 5 0.859091 35 3 0.87143 27 4 0.6250000 7 0 NA 0 0 0.836612 145 5 0.892857 31 4 0.879364 136 5 0.606576 268 5 0.633333 21 3 0.774411 75 5 0.679417 93 3 0.7275064 176 5 0.845902 106 5 0.63755 449 5 0.569487 82 5 1.000000 31 2 0.690317 105 5 0.780143 110 5 0.892435 186 5 0.682672 56 5 0.814161 55 5 0.893506 214 5 0.60000 11 0 0.717081 135 5 0.612274 98 5 0.941667 135 5 0.911482 136 5 0.7807190 178 5 0.785714 41 5 0.932894 162 5 0.908078 0.795085 0.850610 0.8927392 0.8881396 0.892065 0.7225610 0.772018 0.802700 0.8878049 0.870190 0.95428 0.8983674 0.860033 0.865854 0.668234 NA 0.835915 0.882404 0.881003 0.7374542 0.740327 0.834504 0.687627 0.73502 0.9173894 0.652438 0.5727017 1.000000 0.8346615 0.876834 0.894535 0.821632 0.810070 0.836807 0.621951 0.723550 0.736753 0.944614 0.897155 0.9408976 0.944251 0.90785 0 0.851229 0.751469 0.0757678 5 0.812395 0.594897 0.2174976 2.6089e-04 0.999990 weaklyHypermeth 0.130445 1 insignificant 0.0304631 0.9944512 weaklyHypermeth 1 1.00000 insignificant 0.0909376 0.047140 lowCoverage 1 lowCoverage 0.851325 0.815466 0.0591094 5 0.812395 0.755658 0.0567370 6.4661e-03 9.8878e-01 weaklyHypermeth 1.0600e-01 1.0000e+00 insignificant 8.4831e-02 9.8327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1074114 7.5305e-02 lowCoverage 1.0000e+00 lowCoverage 0.851325 0.929448 -0.0703958 5 0.812395 0.837458 -0.0250628 9.9920e-01 0.00271820 weaklyHypometh 1.0000e+00 0.45303 insignificant 9.9423e-01 5.0418e-02 insignificant 1.0000e+00 1.000000 insignificant -0.043135 3.3732e-01 lowCoverage 1.00000000 lowCoverage 0.751911 0.814815 -0.014025 5 0.694047 0.714934 -0.0208874 3.7042e-01 2.2097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7631e-01 5.4016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.016474 7.8794e-01 lowCoverage 1.00000000 lowCoverage 0.751911 0.929231 -0.1521598 5 0.694047 0.810367 -0.1163205 9.9922e-01 1.4084e-06 weaklyHypometh 1.0000e+00 0.0014084 weaklyHypometh 9.9917e-01 0.00096125 weaklyHypometh 1.0000e+00 0.64991 insignificant -0.1340724 2.3148e-02 lowCoverage 0.74656053 lowCoverage 0.815466 0.929448 -0.11460168 5 0.755658 0.837458 -0.0817998 9.9937e-01 1.3020e-03 weaklyHypometh 1.0000e+00 5.0076e-02 weaklyHypometh 9.9338e-01 1.7526e-02 weaklyHypometh 1.0000e+00 5.4769e-01 insignificant -0.1505461 3.2143e-02 lowCoverage 0.68389879 lowCoverage chr1 52824272 52825272 2745 ENSG00000220926 0.673407 111 5 0.570471 98 5 0.535205 52 5 0.4920455 63 2 0.766667 16 1 0.60492 148 5 0.700000 30 2 0.598182 84 2 0.567087 40 2 0.745280 49 5 0.587081 114 5 0.388889 12 1 0.687375 74 5 0.608333 32 2 0.65310 60 5 0.4333333 27 1 0.6250000 14 1 0.570614 93 2 0.638222 105 5 0.724359 127 5 0.730435 39 2 0.638889 27 2 0.580000 54 5 0.638333 38 2 0.7285714 33 2 0.726341 89 5 0.58762 49 3 0.543269 21 2 0.726560 85 5 0.548900 81 5 0.639916 88 5 0.643670 143 5 0.508392 51 2 0.672894 58 5 0.481125 167 5 0.50000 4 0 0.620000 55 5 0.446740 83 5 0.594839 79 5 0.603529 111 5 0.6864469 88 5 0.683462 56 4 0.630438 75 5 0.694881 0.525211 0.508683 0.6944764 0.6916909 0.687171 0.7763713 0.691945 0.565064 0.7693193 0.651058 0.32123 0.7463168 0.718354 0.643897 0.424051 0.594652 0.698201 0.778713 0.709770 0.7633462 0.657540 0.579747 0.522785 0.80199 0.7331893 0.652260 0.5228840 0.701133 0.6320862 0.719791 0.657995 0.498814 0.647610 0.379455 NA 0.668987 0.400125 0.680101 0.636762 0.6269300 0.799270 0.74287 2 0.656042 0.662651 -0.0141019 3 0.623869 0.639590 -0.0157205 3.8997e-01 0.467605 lowCoverage 1.000000 1 lowCoverage 0.5453401 0.4809436 lowCoverage 1 1.00000 lowCoverage -0.0358971 0.239715 lowCoverage 1 lowCoverage 0.656042 0.488038 0.1742434 2 0.623869 0.536910 0.0869592 7.4786e-04 8.1037e-01 lowCoverage 1.3849e-02 1.0000e+00 lowCoverage 1.3582e-02 5.1350e-01 lowCoverage 2.8844e-01 1.0000e+00 lowCoverage 0.0702864 1.2915e-01 lowCoverage 1.0000e+00 lowCoverage 0.656042 0.669927 -0.0140810 5 0.623869 0.636521 -0.0126515 7.1239e-01 0.22310263 insignificant 1.0000e+00 1.00000 insignificant 4.6539e-01 1.2180e-01 insignificant 1.0000e+00 1.000000 insignificant -0.031265 3.0130e-01 lowCoverage 1.00000000 lowCoverage 0.662651 0.488038 0.168804 2 0.639590 0.536910 0.1026796 1.0926e-03 9.2832e-01 lowCoverage 2.0234e-02 1.0000e+00 lowCoverage 2.2215e-02 9.2642e-01 lowCoverage 4.2721e-01 1.0000e+00 lowCoverage 0.106183 3.2113e-02 lowCoverage 0.68325155 lowCoverage 0.662651 0.669927 -0.0074456 3 0.639590 0.636521 0.0030689 2.7312e-01 1.5210e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.3574e-01 0.25153637 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0046325 8.7179e-01 lowCoverage 1.00000000 lowCoverage 0.488038 0.669927 -0.19012597 2 0.536910 0.636521 -0.0996107 7.6570e-01 3.7486e-03 lowCoverage 1.0000e+00 1.1025e-01 lowCoverage 6.4878e-01 1.0106e-02 lowCoverage 1.0000e+00 3.3685e-01 lowCoverage -0.1015510 3.9536e-02 lowCoverage 0.75716002 lowCoverage chr1 52908530 52909530 2748 FAM159A ENSG00000182183 0.721878 136 6 0.752252 93 4 0.415657 44 2 0.7336370 97 5 0.833333 29 2 0.67584 201 5 0.677778 55 2 0.678118 83 5 0.429915 45 2 0.747024 53 5 0.767244 191 6 0.466667 25 2 0.778929 85 6 0.700000 9 0 0.66944 72 4 0.4732143 17 2 0.3333333 10 0 0.840909 83 2 0.772027 91 2 0.700458 150 6 0.761905 30 3 0.672562 68 5 0.676959 62 4 0.587013 40 4 0.8283730 57 4 0.713624 126 5 0.71786 46 3 0.500000 16 1 0.615018 69 2 0.770181 126 6 0.660441 100 6 0.769841 217 6 0.732034 99 5 0.638476 78 5 0.533208 63 2 0.57143 12 1 0.623737 44 3 0.613757 77 6 0.721548 98 2 0.681485 154 6 0.7689755 119 6 0.818249 99 2 0.766162 109 5 0.721032 0.742387 0.570937 0.7430326 0.7954545 0.755921 0.7055556 0.756686 0.653458 0.7146465 0.784636 0.60222 0.7833618 0.826670 0.753788 0.549571 0.439394 0.801194 0.790514 0.728343 0.9242424 0.832251 0.687276 0.807736 0.87963 0.7736291 0.822348 0.8484848 0.637141 0.7930778 0.780010 0.753199 0.671412 0.742453 0.691188 0.737374 0.710514 0.676768 0.773047 0.760542 0.7911387 0.820718 0.78650 1 0.723391 0.753396 -0.0250895 5 0.723964 0.707138 0.0168261 3.1411e-01 0.249518 insignificant 1.000000 1 insignificant 0.0905372 0.0335826 weaklyHypometh 1 1.00000 insignificant -0.0310986 0.470318 lowCoverage 1 lowCoverage 0.723391 0.683646 0.0567983 5 0.723964 0.592261 0.1317030 1.3491e-02 9.7949e-01 weaklyHypermeth 2.0135e-01 1.0000e+00 insignificant 4.1094e-03 6.8684e-01 weaklyHypermeth 1.1106e-01 1.0000e+00 insignificant 0.0396092 3.7116e-01 lowCoverage 1.0000e+00 lowCoverage 0.723391 0.759931 -0.0471038 5 0.723964 0.741567 -0.0176033 8.0929e-01 0.02736434 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.6579e-01 9.3335e-03 weaklyHypometh 1.0000e+00 0.977670 insignificant -0.092901 3.3325e-02 lowCoverage 0.95214880 lowCoverage 0.753396 0.683646 0.081496 5 0.707138 0.592261 0.1148769 1.7151e-03 9.9427e-01 weaklyHypermeth 3.0627e-02 1.0000e+00 weaklyHypermeth 2.8728e-02 9.2500e-01 weaklyHypermeth 5.2233e-01 1.0000e+00 insignificant 0.070708 8.6478e-02 lowCoverage 1.00000000 lowCoverage 0.753396 0.759931 -0.0172805 5 0.707138 0.741567 -0.0344294 7.9329e-01 7.4791e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.7490e-01 0.08101048 insignificant 1.0000e+00 1.00000 insignificant -0.0618027 1.0219e-01 lowCoverage 1.00000000 lowCoverage 0.683646 0.759931 -0.10152777 5 0.592261 0.741567 -0.1493064 9.6787e-01 5.0975e-03 weaklyHypometh 1.0000e+00 1.4160e-01 insignificant 9.4850e-01 8.7506e-03 weaklyHypometh 1.0000e+00 3.1005e-01 insignificant -0.1325106 5.1418e-03 lowCoverage 0.20567398 lowCoverage chr1 53512515 53513515 2771 MAGOH ENSG00000162385 0.948772 159 5 0.865952 58 5 0.882540 37 5 0.9453940 161 5 0.920000 27 5 0.91933 203 5 0.904762 23 2 0.894545 73 5 0.935000 62 5 0.909972 80 5 0.917202 129 5 0.750000 12 2 0.994444 100 5 0.900000 38 5 0.93556 58 5 1.0000000 8 0 0.7500000 6 0 0.971224 178 5 0.960000 38 3 0.943211 187 5 0.977778 43 5 0.993103 79 5 0.927381 70 5 0.921429 41 4 0.9149660 64 5 0.969231 77 5 0.92302 76 3 0.836735 26 3 0.906970 56 5 0.912088 72 5 0.977778 65 5 0.945336 193 5 0.900664 57 5 0.952116 73 5 1.000000 135 3 0.96667 25 2 0.961818 33 3 0.987500 64 5 0.939394 80 4 0.878168 134 2 0.9801093 124 2 0.913043 46 2 0.988462 125 5 0.900957 0.858315 0.910053 0.9149839 0.9090909 0.872818 0.9184704 0.888430 0.936553 0.8957092 0.836354 0.79053 0.9890572 0.806061 0.926936 0.987502 0.790532 0.944522 0.984848 0.925947 0.9915825 0.986416 0.900343 0.970238 0.90945 0.9883450 0.929533 0.9891775 0.910698 0.9177489 0.956229 0.940732 0.876534 0.959275 0.940354 0.934343 0.926309 0.976326 0.882920 0.919841 0.9618314 0.922678 0.97815 1 0.916921 0.944186 -0.0272307 5 0.942522 0.952436 -0.0099143 5.3232e-01 0.098181 insignificant 1.000000 1 insignificant 0.6583510 0.1668554 insignificant 1 1.00000 insignificant -0.0214221 0.271199 lowCoverage 1 lowCoverage 0.916870 0.963824 -0.0356091 5 0.931027 0.965024 -0.0339970 9.9406e-01 6.0201e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7325e-01 1.1153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0490655 2.7610e-02 lowCoverage 5.3097e-01 lowCoverage 0.916870 0.939096 -0.0414545 2 0.931027 0.958948 -0.0279216 9.8733e-01 0.04242076 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.8625e-01 9.9161e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.027440 3.0715e-01 lowCoverage 1.00000000 lowCoverage 0.944056 0.963824 -0.017028 5 0.942924 0.965024 -0.0220999 9.1679e-01 5.6391e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9636e-01 1.9341e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.027643 1.6526e-01 lowCoverage 1.00000000 lowCoverage 0.944056 0.939096 0.0026613 2 0.942924 0.958948 -0.0160245 7.8494e-01 1.1113e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.6809e-01 0.14257375 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0060179 8.0938e-01 lowCoverage 1.00000000 lowCoverage 0.963824 0.939096 0.00076946 2 0.965024 0.958948 0.0060754 7.3730e-01 5.7499e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7652e-01 6.1066e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0216256 4.1424e-01 lowCoverage 1.00000000 lowCoverage chr1 53534362 53535362 2775 MAGOH ENSG00000162385 0.869235 294 9 0.721554 304 9 0.789487 327 9 0.8843988 445 9 0.826482 200 9 0.79191 483 9 0.878456 352 9 0.809655 265 9 0.772835 306 7 0.804116 317 8 0.854716 327 9 0.871450 278 7 0.691402 322 7 0.754690 241 7 0.79597 370 9 0.8138594 259 9 0.6337802 117 5 0.684436 426 9 0.808681 126 7 0.842500 289 8 0.634379 145 7 0.462172 233 9 0.905686 205 7 0.852189 141 9 0.8059699 194 9 0.860788 416 9 0.84160 130 9 0.879403 153 7 0.750999 215 9 0.897114 395 9 0.715834 383 9 0.889519 406 9 0.698358 335 9 0.702898 187 9 0.739286 199 6 0.60317 45 4 0.772021 221 9 0.732559 384 9 0.295870 454 9 0.566664 340 8 0.5875330 257 9 0.498399 275 9 0.495086 496 9 0.841521 0.738300 0.840623 0.8436050 0.7511587 0.780528 0.8672117 0.789273 0.819489 0.8650800 0.836249 0.80733 0.6815130 0.810694 0.770834 0.712767 0.628972 0.640619 0.855659 0.770478 0.7624490 0.372869 0.883773 0.801703 0.83567 0.8510815 0.785573 0.8541088 0.712450 0.8774000 0.680039 0.889260 0.592166 0.610798 0.645581 0.593313 0.729843 0.686682 0.312272 0.461781 0.5093420 0.403446 0.49812 5 0.794478 0.785738 0.0063226 9 0.711281 0.654260 0.0570210 6.1838e-01 0.967289 insignificant 1.000000 1 insignificant 0.8580723 0.8637318 insignificant 1 1.00000 insignificant 0.0036763 0.930200 insignificant 1 insignificant 0.795199 0.696572 0.1079199 9 0.818745 0.719971 0.0987739 2.0465e-11 1.5652e-04 weaklyHypermeth 9.7451e-10 1.5652e-02 weaklyHypermeth 2.3815e-06 1.6562e-03 weaklyHypermeth 1.5877e-04 2.3661e-01 weaklyHypermeth 0.0869309 1.2095e-02 weaklyHypermeth 3.1014e-01 insignificant 0.795199 0.434687 0.3475076 9 0.818745 0.474759 0.3439863 1.1397e-43 1.00000000 hypermethylated 1.1397e-40 1.00000 hypermethylated 1.6945e-20 1.0000e+00 hypermethylated 1.6945e-17 1.000000 hypermethylated 0.306270 2.7743e-03 weaklyHypermeth 0.13211188 insignificant 0.787163 0.696572 0.095057 9 0.807532 0.719971 0.0875607 2.2398e-07 2.1221e-02 weaklyHypermeth 7.7233e-06 1.0000e+00 weaklyHypermeth 1.1797e-04 2.8363e-02 weaklyHypermeth 4.9155e-03 1.0000e+00 weaklyHypermeth 0.083255 8.2865e-02 insignificant 1.00000000 insignificant 0.787163 0.434687 0.3479230 9 0.807532 0.474759 0.3327731 6.2161e-22 1.0000e+00 hypermethylated 2.0720e-19 1.0000000 hypermethylated 1.3081e-13 1.00000000 hypermethylated 1.3081e-10 1.00000 hypermethylated 0.3025935 1.2203e-03 weaklyHypermeth 0.11093670 insignificant 0.696572 0.434687 0.26162186 9 0.719971 0.474759 0.2452124 9.8951e-18 9.5008e-01 hypermethylated 4.9475e-15 1.0000e+00 hypermethylated 9.0945e-08 9.8011e-01 hypermethylated 2.2736e-05 1.0000e+00 hypermethylated 0.2193389 9.2876e-03 weaklyHypermeth 0.33169880 insignificant chr1 59754848 59755848 3343 FGGY ENSG00000172456 0.91423 192 6 0.73543 79 7 0.68488 105 7 0.90266 116 6 0.88611 48 5 0.83941 207 8 0.91526 81 7 0.79792 70 6 0.91146 54 5 0.79019 95 8 0.87466 148 8 0.74385 51 5 0.78949 75 7 NA 0 0 0.955227 85 5 0.87574 40 4 0.79360 76 6 0.84588 75 6 0.81212 95 6 0.87017 168 7 0.77292 51 5 0.86905 54 5 0.87529 106 6 0.88889 32 2 0.66204 27 2 0.71451 131 6 0.74351 46 4 0.83056 39 4 0.88961 79 5 0.878467 96 7 0.75218 106 5 0.80077 247 8 0.87285 82 6 0.75104 89 8 0.75532 204 8 0.60694 54 5 0.87143 36 2 0.7966712 109 8 0.92064 166 6 0.82637 160 6 0.880949 126 6 0.855578 165 6 0.901337 165 6 0.89169 0.823494 0.77872 0.89706 0.83008 0.83413 0.85740 0.82712 0.892157 0.76583 0.83732 0.82185 0.75947 NA 0.946948 0.85341 0.83349 0.83280 0.80389 0.84552 0.90479 0.84532 0.88877 0.81171 0.82353 0.73348 0.689945 0.8480029 0.84747 0.898320 0.81138 0.80357 0.90182 0.76362 0.731689 0.8228032 0.841351 0.833158 0.922408 0.852619 0.881226 0.878978 0.861906 3 0.84032 0.81755 0.027304 5 0.83730 0.79907 0.038231 0.106623 0.98686 insignificant 1 1 insignificant 0.438621 0.823576 insignificant 1 1 insignificant 0.032376 0.255093 lowCoverage 1 lowCoverage 0.84032 0.80836 0.043655 5 0.83730 0.788384 0.048913 7.6621e-02 0.99481 insignificant 1.0000e+00 1 insignificant 1.7282e-01 0.96067 insignificant 1.000e+00 1 insignificant 0.063148 0.19108538 insignificant 1.000000 insignificant 0.84032 0.870844 -0.039206 5 0.83730 0.890784 -0.053486 9.7891e-01 0.039329 weaklyHypometh 1.00000000 1 insignificant 9.5818e-01 0.016111 weaklyHypometh 1.00000000 1 insignificant -0.038118 1.2773e-01 insignificant 1.0000000 insignificant 0.81755 0.80836 0.015477 5 0.79907 0.788384 0.010682 5.4306e-01 0.90943 insignificant 1.00000000 1 insignificant 3.5141e-01 0.95582 insignificant 1.0000000 1 insignificant 0.030772 0.5217879 lowCoverage 1.00000 lowCoverage 0.81755 0.870844 -0.063859 5 0.79907 0.890784 -0.091717 0.9974140 0.0029753 weaklyHypometh 1.00000 1 insignificant 0.9910908 0.02882 weaklyHypometh 1.00000 1 insignificant -0.070495 0.02339925 lowCoverage 1.00000 lowCoverage 0.80836 0.870844 -0.074416 5 0.788384 0.890784 -0.102399 0.99745 0.00030662 weaklyHypometh 1 0.034069 weaklyHypometh 0.99775 0.0087428 weaklyHypometh 1 0.7948 insignificant -0.10126660 0.054997 insignificant 1 insignificant chr1 61575910 61576910 3623 NFIA ENSG00000162599 0.33047 213 5 0.11340 477 5 0.19436 139 5 0.19286 144 3 0.13368 180 5 0.39472 280 5 0.18600 206 5 0.20417 158 5 0.16022 173 5 0.06500 124 5 0.33108 161 5 0.18584 57 3 0.10104 75 4 0.31667 37 3 0.097027 79 4 0.23653 146 5 0.22178 114 3 0.39910 235 2 0.14907 255 5 0.17932 222 5 0.23303 90 5 0.12801 52 3 0.14745 167 5 0.20595 63 5 0.36111 20 2 0.18532 173 4 0.19159 177 5 0.03961 121 5 0.11237 190 5 0.051798 310 5 0.13821 242 5 0.32232 247 5 0.00000 314 5 0.00000 104 5 0.04902 296 4 0.16667 5 0 0.03439 184 5 0.0054054 181 5 0.08730 213 4 0.05165 128 5 0.027848 176 4 0.019608 118 3 0.025101 205 3 0.27130 0.076355 0.17786 0.17197 0.09946 0.32542 0.08955 0.14758 0.099246 0.02479 0.30057 0.15059 0.12012 0.35138 0.075301 0.14488 0.15534 0.13792 0.12832 0.18099 0.11942 0.12434 0.11720 0.10699 0.24022 0.12220 0.094211 0.0093037 0.10138 0.053666 0.19184 0.26879 0.00000 0.00000 0.018762 0.0061513 0.016729 0.010675 0.078783 0.056234 0.054994 0.030977 0.042278 2 0.18331 0.14039 0.037536 5 0.19305 0.14275 0.050297 0.049606 0.98510 weaklyHypermeth 1 1 insignificant 0.066138 0.991730 insignificant 1 1 insignificant 0.033218 0.357917 lowCoverage 1 lowCoverage 0.18331 0.01476 0.168567 5 0.19305 0.013674 0.179374 2.8363e-10 1.00000 weaklyHypermeth 2.3636e-08 1 weaklyHypermeth 7.4489e-09 1.00000 weaklyHypermeth 7.449e-06 1 weaklyHypermeth 0.167037 0.00030382 lowCoverage 0.043402 lowCoverage 0.18331 0.058333 0.100355 4 0.19305 0.053972 0.139075 3.4229e-06 1.000000 lowCoverage 0.00068459 1 lowCoverage 1.1095e-06 1.000000 lowCoverage 0.00055477 1 lowCoverage 0.167316 1.0535e-06 lowCoverage 0.0010535 lowCoverage 0.14039 0.01476 0.127224 5 0.14275 0.013674 0.129077 4.6611e-06 1.00000 weaklyHypermeth 0.00029132 1 weaklyHypermeth 7.3970e-06 1.00000 weaklyHypermeth 0.0012328 1 weaklyHypermeth 0.133819 0.0034116 lowCoverage 0.28430 lowCoverage 0.14039 0.058333 0.070084 4 0.14275 0.053972 0.088778 0.0034451 0.9999396 lowCoverage 0.34451 1 lowCoverage 0.0006398 0.99999 lowCoverage 0.12796 1 lowCoverage 0.134098 0.00059508 lowCoverage 0.57586 lowCoverage 0.01476 0.058333 -0.050218 4 0.013674 0.053972 -0.040298 0.99990 0.00058329 lowCoverage 1 0.044869 lowCoverage 0.99632 0.0495146 lowCoverage 1 1.0000 lowCoverage 0.00027884 0.992591 lowCoverage 1 lowCoverage chr1 63506227 63507227 3841 ENSG00000216223 0.63859 173 6 0.66947 107 6 0.43480 93 6 0.65278 144 6 0.62996 41 5 0.66309 280 6 0.59031 98 6 0.52725 67 5 0.59443 101 6 0.63796 81 6 0.68349 154 6 0.56920 96 6 0.57536 140 6 NA 0 0 0.666766 114 6 0.62937 70 6 0.55370 73 6 0.74818 166 6 0.59679 127 6 0.69524 232 6 0.58632 50 4 0.65861 77 6 0.78491 121 6 0.76241 58 6 0.75873 41 6 0.66584 176 6 0.65456 70 5 0.76347 42 4 0.59249 83 6 0.649090 171 6 0.63597 242 6 0.60577 306 6 0.56093 77 6 0.56292 79 6 0.57788 137 6 0.65884 54 6 0.59420 67 6 0.6399270 168 6 0.68577 237 6 0.64665 158 6 0.635293 198 6 0.668201 207 6 0.668426 158 6 0.63308 0.667704 0.45701 0.67136 0.68380 0.67167 0.62212 0.54190 0.611950 0.66084 0.71830 0.57724 0.57527 NA 0.699082 0.63319 0.55211 0.75573 0.63199 0.69798 0.55909 0.63613 0.77442 0.76493 0.73088 0.69120 0.633961 0.7443430 0.61426 0.654408 0.65647 0.62344 0.59906 0.57521 0.599160 0.6602422 0.605130 0.675958 0.720068 0.672720 0.638148 0.679567 0.696872 5 0.64404 0.66319 -0.018027 6 0.63193 0.65106 -0.019127 0.911078 0.24096 insignificant 1 1 insignificant 0.981955 0.003424 weaklyHypometh 1 1 insignificant -0.057740 0.038259 weaklyHypometh 1 insignificant 0.64404 0.62371 0.021525 6 0.63193 0.600631 0.031302 8.2206e-02 0.91211 insignificant 1.0000e+00 1 insignificant 3.4438e-01 0.81164 insignificant 1.000e+00 1 insignificant 0.019658 0.41147206 insignificant 1.000000 insignificant 0.64404 0.661795 -0.033791 6 0.63193 0.662070 -0.030138 9.4888e-01 0.125166 insignificant 1.00000000 1 insignificant 9.8791e-01 0.103083 insignificant 1.00000000 1 insignificant -0.042094 3.2206e-02 weaklyHypometh 1.0000000 insignificant 0.66319 0.62371 0.039129 6 0.65106 0.600631 0.050429 5.4170e-02 0.96717 insignificant 1.00000000 1 insignificant 3.1208e-03 0.99153 weaklyHypermeth 0.1835756 1 insignificant 0.077398 0.0107837 weaklyHypermeth 0.63434 insignificant 0.66319 0.661795 -0.018276 6 0.65106 0.662070 -0.011011 0.8129447 0.3049632 insignificant 1.00000 1 insignificant 0.4611649 0.69335 insignificant 1.00000 1 insignificant 0.015647 0.50001593 insignificant 1.00000 insignificant 0.62371 0.661795 -0.058277 6 0.600631 0.662070 -0.061440 0.99876 0.03214814 weaklyHypometh 1 1.000000 insignificant 0.99948 0.0372239 weaklyHypometh 1 1.0000 insignificant -0.06175154 0.012926 weaklyHypometh 1 insignificant chr1 68638464 68639464 4082 ENSG00000220003 0.78118 175 5 0.71023 88 5 0.65778 49 5 0.80137 161 5 0.73909 33 4 0.79274 197 5 0.64952 33 5 0.86222 67 5 0.69524 33 1 0.59259 48 5 0.75474 137 5 0.68000 31 5 0.52721 63 5 0.80952 44 5 0.77404 51 5 0.70000 26 1 0.71429 9 0 0.70533 175 5 0.79798 81 5 0.61073 178 5 0.86667 12 1 0.81919 58 5 0.69701 89 5 0.48214 23 1 0.84545 53 5 0.50936 111 5 0.95294 32 3 0.28571 10 0 0.66555 80 5 0.43015 90 5 0.76761 98 5 0.76034 197 5 0.72323 47 5 0.57181 76 5 0.66095 67 5 0.55000 12 1 0.67500 34 5 0.75952 119 5 0.81350 102 5 0.74582 113 5 0.81674 149 5 0.79565 90 5 0.72925 194 5 0.81815 0.75169 0.71005 0.83462 0.75673 0.81054 0.69739 0.86587 0.73696 0.78108 0.80722 0.76190 0.78668 0.95635 0.75828 0.76786 0.86905 0.76045 0.81403 0.81014 0.87103 0.85348 0.76138 0.73214 0.87110 0.77734 0.91036 0.38095 0.73838 0.77377 0.82922 0.80155 0.72944 0.61845 0.74830 0.77906 0.80972 0.71261 0.85133 0.87718 0.85279 0.84345 0.79745 1 0.77665 0.74912 0.0117070 5 0.63873 0.49305 0.1456790 0.067421 0.903580 insignificant 1 1 insignificant 0.17785 0.959473 insignificant 1 1 insignificant 0.044279 0.485251 lowCoverage 1 lowCoverage 0.77665 0.66479 0.0854890 5 0.63873 0.54000 0.0987227 0.00027845 0.98817 weaklyHypermeth 0.034806 1 weaklyHypermeth 0.088764 0.90295 insignificant 1 1 insignificant 0.061037 0.14950 lowCoverage 1 lowCoverage 0.77632 0.83951 -0.040079 5 0.60752 0.70577 -0.098247 0.97543 0.02161088 weaklyHypometh 1 1.00000 insignificant 0.99208 0.04994145 weaklyHypometh 1 1.00000 insignificant -0.062404 3.0341e-02 lowCoverage 1.000000 lowCoverage 0.74912 0.66479 0.070623 5 0.49305 0.54000 -0.046956 4.4214e-02 0.94585 weaklyHypermeth 1.0000000 1 insignificant 0.39380562 0.87475 insignificant 1.000000 1 insignificant 0.016759 0.807812 lowCoverage 1 lowCoverage 0.75088 0.83951 -0.049108 5 0.56348 0.70577 -0.142288 0.98290 0.12982624 insignificant 1 1.00000 insignificant 0.98764 0.093044 insignificant 1 1 insignificant -0.106683 0.106635 lowCoverage 1 lowCoverage 0.66667 0.83951 -0.122381 5 0.61715 0.70577 -0.088624 0.99593 1.4811e-03 weaklyHypometh 1 0.161989 insignificant 0.99740 0.08195146 insignificant 1 1.00000 insignificant -0.123441 0.013027 lowCoverage 1 lowCoverage chr1 72156332 72157332 4266 ENSG00000218747 0.78841 169 5 0.77121 104 5 0.75864 69 5 0.85735 92 5 0.77778 37 4 0.74528 159 5 0.71444 72 5 0.81500 42 5 0.80276 80 5 0.74167 81 5 0.77466 130 5 0.75664 59 5 0.74769 103 5 NA 0 0 0.76627 82 5 0.68889 40 5 0.77250 58 5 0.75937 65 5 0.76649 122 5 0.78723 168 5 0.75000 18 0 0.83919 48 5 0.84988 75 5 0.84364 39 3 0.81429 25 3 0.73257 89 5 0.81368 38 3 0.92778 33 3 0.73770 61 5 0.83032 114 5 0.81908 100 5 0.79301 188 5 0.75911 67 5 0.71476 79 5 0.78618 84 5 0.84953 51 5 0.77897 45 5 0.80190 91 5 0.83345 127 5 0.81813 191 5 0.85737 131 5 0.86303 163 5 0.85954 165 5 0.80339 0.77004 0.71850 0.85346 0.80947 0.75881 0.73423 0.88141 0.78983 0.76768 0.79570 0.73368 0.74744 NA 0.73806 0.68926 0.77316 0.77521 0.76035 0.79473 0.67949 0.82168 0.87696 0.79895 0.80372 0.72806 0.76014 0.90741 0.73314 0.84462 0.84624 0.80468 0.75960 0.69414 0.79309 0.86586 0.77433 0.79457 0.83071 0.82305 0.84477 0.86718 0.85224 3 0.77483 0.80193 -0.0286232 5 0.76892 0.79832 -0.0293984 0.981535 0.134882 insignificant 1 1 insignificant 0.98052 0.044835 weaklyHypometh 1 1 insignificant -0.044580 0.022992 lowCoverage 1 lowCoverage 0.77483 0.77938 -0.0053476 5 0.76892 0.77835 -0.0094262 0.24963217 0.26830 insignificant 1.000000 1 insignificant 0.311262 0.20315 insignificant 1 1 insignificant -0.013727 0.51543 lowCoverage 1 lowCoverage 0.77483 0.85071 -0.076054 5 0.76892 0.84588 -0.076962 0.99999 0.00032961 weaklyHypometh 1 0.32961 insignificant 0.99999 0.00053098 weaklyHypometh 1 0.53098 insignificant -0.078288 2.7791e-05 lowCoverage 0.027791 lowCoverage 0.80193 0.77938 0.023015 5 0.79832 0.77835 0.019972 1.5999e-01 0.78196 insignificant 1.0000000 1 insignificant 0.20665649 0.83774 insignificant 1.000000 1 insignificant 0.030853 0.225621 lowCoverage 1 lowCoverage 0.80193 0.85071 -0.045584 5 0.79832 0.84588 -0.047564 0.99318 0.02800979 weaklyHypometh 1 1.00000 insignificant 0.96009 0.169697 insignificant 1 1 insignificant -0.033709 0.082038 lowCoverage 1 lowCoverage 0.77938 0.85071 -0.068194 5 0.77835 0.84588 -0.067536 0.99781 1.6199e-03 weaklyHypometh 1 0.161989 insignificant 0.96842 0.04436050 weaklyHypometh 1 1.00000 insignificant -0.064561 0.015128 weaklyHypometh 1 insignificant chr1 72994298 72995298 4352 ENSG00000212366 0.80794 437 9 0.70588 128 9 0.57512 117 9 0.80466 269 9 0.71917 93 9 0.79488 303 9 0.80388 66 6 0.75561 139 8 0.62295 80 9 0.76017 153 9 0.68796 248 9 0.87866 77 6 0.62514 114 9 0.89048 23 3 0.83095 128 9 0.80920 64 6 0.83295 153 9 0.80209 339 9 0.62308 143 9 0.81103 254 9 0.73377 52 6 0.88965 94 8 0.80294 326 9 0.70950 112 7 0.91595 84 8 0.84956 175 7 0.73302 106 8 0.78843 58 4 0.77875 90 9 0.69098 220 9 0.64334 214 9 0.78895 402 9 0.74379 100 7 0.64410 127 9 0.75351 177 9 0.87654 81 6 0.58554 64 5 0.72837 218 9 0.86581 379 9 0.63388 368 9 0.78618 317 9 0.82435 365 9 0.87013 329 9 0.80830 0.67430 0.63022 0.82770 0.79610 0.82044 0.87805 0.77967 0.77333 0.83755 0.83656 0.85287 0.77050 0.82671 0.86797 0.87275 0.78535 0.82888 0.79471 0.83283 0.86881 0.89207 0.82515 0.85051 0.89884 0.84203 0.82914 0.84142 0.79871 0.81029 0.75375 0.83010 0.77402 0.66993 0.76432 0.80566 0.73053 0.74786 0.88125 0.83975 0.79769 0.84244 0.88446 4 0.79537 0.81480 -0.0192172 9 0.65285 0.74823 -0.0953799 0.882159 0.047703 weaklyHypometh 1 1 insignificant 0.98236 0.079243 insignificant 1 1 insignificant -0.019979 0.523240 insignificant 1 insignificant 0.79596 0.75619 0.0483585 9 0.70265 0.71831 -0.0156612 0.00227812 0.95120 weaklyHypermeth 0.253125 1 insignificant 0.018455 0.98553 weaklyHypermeth 1 1 insignificant 0.035113 0.46431 insignificant 1 insignificant 0.79860 0.84016 -0.045192 9 0.69599 0.67639 0.019598 0.99722 0.12053520 insignificant 1 1.00000 insignificant 0.99878 0.36866103 insignificant 1 1.00000 insignificant -0.038980 4.4674e-01 insignificant 1.000000 insignificant 0.81618 0.75619 0.068557 9 0.73120 0.71831 0.012895 3.0824e-05 0.96906 weaklyHypermeth 0.0051373 1 weaklyHypermeth 0.00042962 0.99122 weaklyHypermeth 0.085924 1 weaklyHypermeth 0.055093 0.273804 insignificant 1 insignificant 0.81899 0.84016 -0.024495 9 0.79745 0.67639 0.121058 0.89809 0.40449743 insignificant 1 1.00000 insignificant 0.76954 0.845848 insignificant 1 1 insignificant -0.019000 0.711836 insignificant 1 insignificant 0.75654 0.84132 -0.095968 9 0.73552 0.82995 -0.094425 0.99997 1.2536e-05 weaklyHypometh 1 0.003134 weaklyHypometh 0.99991 0.00037849 weaklyHypometh 1 0.16076 insignificant -0.074093 0.245786 insignificant 1 insignificant chr1 79368413 79369413 4860 ENSG00000217763 0.86171 245 6 0.60317 47 3 0.86474 66 5 0.88904 141 6 0.89111 23 2 0.71953 117 5 0.68889 39 5 0.82202 66 5 0.59259 40 2 0.93750 42 2 0.72458 103 5 0.64904 46 5 0.79495 37 4 NA 0 0 0.88399 53 5 0.63333 23 1 0.78657 45 5 0.88325 91 6 0.75000 41 2 0.84046 109 5 1.00000 13 0 0.50476 20 2 0.86623 114 6 0.79583 25 2 0.83333 19 2 0.85470 96 5 0.76190 22 2 0.75556 22 2 0.94286 42 4 0.91687 80 5 0.70013 89 6 0.81678 158 6 0.71333 41 2 0.66944 49 5 0.89008 75 5 0.77060 64 5 0.90256 28 2 0.82323 89 2 0.90730 166 6 0.91849 185 6 0.91263 110 6 0.90387 157 6 0.90437 120 6 0.80928 0.79924 0.74951 0.84123 0.79835 0.71483 0.85185 0.86287 0.69959 0.86111 0.83984 0.77153 0.80935 NA 0.79363 0.78395 0.75652 0.79891 0.81481 0.83330 1.00000 0.57260 0.77592 0.70062 0.93210 0.79392 0.75897 0.84362 0.93474 0.90345 0.81785 0.81489 0.72222 0.76749 0.82451 0.64558 0.81956 0.74297 0.89363 0.90154 0.81925 0.87131 0.86537 2 0.82678 0.82571 -0.0078217 5 0.83263 0.82718 0.0054493 0.539182 0.260320 insignificant 1 1 insignificant 0.96289 0.106389 insignificant 1 1 insignificant -0.032599 0.473453 lowCoverage 1 lowCoverage 0.82678 0.76301 0.0554760 5 0.83263 0.78020 0.0524317 0.02463164 0.99252 weaklyHypermeth 1.000000 1 insignificant 0.327265 0.75945 insignificant 1 1 insignificant -0.015061 0.74939 lowCoverage 1 lowCoverage 0.82678 0.92005 -0.066547 5 0.83263 0.90866 -0.076035 0.99729 0.00919748 weaklyHypometh 1 1.00000 insignificant 0.99503 0.03153777 weaklyHypometh 1 1.00000 insignificant -0.129517 5.8238e-05 lowCoverage 0.029119 lowCoverage 0.82571 0.76301 0.067008 5 0.82718 0.78020 0.046982 1.2821e-02 0.95802 weaklyHypermeth 1.0000000 1 insignificant 0.11357635 0.91239 insignificant 1.000000 1 insignificant 0.017538 0.747893 lowCoverage 1 lowCoverage 0.82571 0.92005 -0.060961 5 0.82718 0.90866 -0.081484 0.95442 0.02937964 weaklyHypometh 1 1.00000 insignificant 0.71546 0.294105 insignificant 1 1 insignificant -0.096917 0.024242 lowCoverage 1 lowCoverage 0.76301 0.92005 -0.120395 5 0.78020 0.90866 -0.128467 0.99999 2.5792e-04 weaklyHypometh 1 0.036846 weaklyHypometh 0.98955 0.03328473 weaklyHypometh 1 1.00000 insignificant -0.114456 0.030898 lowCoverage 1 lowCoverage chr1 79492708 79493708 4884 ENSG00000217763 0.79153 285 9 0.85775 71 6 0.82546 59 5 0.86015 308 9 0.80556 37 2 0.89427 252 9 0.70667 46 3 0.77836 64 4 0.47619 44 5 0.72421 36 4 0.73645 120 10 1.00000 26 1 0.90851 97 6 NA 0 0 0.97424 50 6 0.95000 17 3 0.70833 32 4 0.89944 320 9 0.83091 73 8 0.83114 160 9 0.90909 22 0 0.80523 76 9 0.76095 144 10 0.94213 46 4 0.92311 82 5 0.86877 140 9 0.81905 57 5 1.00000 16 1 0.86935 67 5 0.83737 135 10 0.77920 146 9 0.84105 277 9 0.82750 64 5 0.74525 72 5 0.78897 171 10 0.88333 37 4 0.73968 34 4 0.80092 146 9 0.85897 147 9 0.88109 240 9 0.82560 262 9 0.89076 163 9 0.91058 312 9 0.81534 0.91472 0.80150 0.87727 0.79167 0.93065 0.79410 0.91374 0.84995 0.83259 0.81572 1.00000 0.91517 NA 0.94184 0.95342 0.96983 0.92572 0.93056 0.84779 0.82639 0.79577 0.82634 0.94575 0.87565 0.95269 0.91642 1.00000 0.89044 0.88666 0.87313 0.85824 0.93012 0.74366 0.80773 0.97396 0.93899 0.88823 0.96094 0.88239 0.86458 0.93820 0.96002 1 0.86218 0.84851 0.0039849 9 0.87045 0.86127 0.0091733 0.784832 0.873857 insignificant 1 1 insignificant 0.97130 0.462012 insignificant 1 1 insignificant -0.044037 0.208154 insignificant 1 insignificant 0.86205 0.82443 0.0403603 9 0.85867 0.78771 0.0709572 0.02400049 0.98044 weaklyHypermeth 1.000000 1 insignificant 0.445320 0.88511 insignificant 1 1 insignificant 0.021294 0.55177 insignificant 1 insignificant 0.86172 0.90836 -0.047049 9 0.84453 0.89035 -0.045814 0.99389 0.00594899 weaklyHypometh 1 1.00000 insignificant 0.98733 0.03292827 weaklyHypometh 1 1.00000 insignificant -0.054498 9.3822e-02 insignificant 1.000000 insignificant 0.84826 0.82443 0.038548 9 0.84866 0.78771 0.060950 2.3045e-02 0.95202 weaklyHypermeth 1.0000000 1 insignificant 0.13329287 0.96157 insignificant 1.000000 1 insignificant 0.065331 0.047982 weaklyHypermeth 1 insignificant 0.84775 0.90836 -0.048866 9 0.83353 0.89035 -0.056822 0.99995 0.00084495 weaklyHypometh 1 0.84495 insignificant 0.94595 0.119438 insignificant 1 1 insignificant -0.010461 0.681975 insignificant 1 insignificant 0.82534 0.90836 -0.083299 9 0.79982 0.89035 -0.090534 0.99994 2.1694e-04 weaklyHypometh 1 0.036156 weaklyHypometh 0.99988 0.02193500 weaklyHypometh 1 1.00000 insignificant -0.075792 0.019623 weaklyHypometh 1 insignificant chr1 81739607 81740607 5244 ENSG00000181703 0.90465 340 11 0.57796 152 11 0.62935 172 11 0.96030 274 11 0.52026 340 11 0.89899 159 11 0.61575 364 11 0.45806 191 9 0.53449 235 11 0.42261 166 11 0.53454 479 11 0.48165 343 11 0.53466 335 11 NA 0 0 0.53261 435 11 0.41989 455 11 0.43652 220 11 0.95330 290 11 0.49905 281 10 0.82720 202 11 0.31801 68 6 0.83232 73 10 0.72961 235 11 0.38015 97 7 0.93182 92 10 0.49537 172 11 0.71370 117 10 0.49910 59 6 0.36441 148 6 0.64894 131 11 0.48172 92 8 0.90479 278 11 0.52872 60 9 0.55182 199 11 0.71706 87 6 0.85159 108 10 0.613290 104 10 0.71429 90 11 0.90397 464 11 0.91577 296 11 0.93928 425 11 0.97092 364 11 0.98279 387 11 0.88688 0.47738 0.47988 0.95465 0.32353 0.87582 0.46644 0.31851 0.42171 0.29848 0.37789 0.28133 0.37701 NA 0.32513 0.25088 0.27506 0.94204 0.34218 0.78441 0.31811 0.88584 0.63213 0.31961 0.92007 0.32865 0.76658 0.56679 0.22232 0.55046 0.35971 0.90264 0.417958 0.38954 0.76206 0.80256 0.594513 0.594989 0.87203 0.88998 0.92066 0.97005 0.97898 6 0.45334 0.61716 -0.1086315 11 0.57186 0.65044 -0.078580 0.223236 0.0020555 weaklyHypometh 1 0.7966 insignificant 0.023607 0.31568 inconclusive 1 1 insignificant 0.009663 0.899516 insignificant 1 insignificant 0.45334 0.59722 -0.147516 10 0.57186 0.66448 -0.092620 3.1753e-01 0.0018266 weaklyHypometh 1.0000e+00 0.60887 insignificant 9.3648e-01 0.031047 weaklyHypometh 1.0000e+00 1 insignificant -0.044803 0.5083126 insignificant 1 insignificant 0.45334 0.96023 -0.401532 11 0.57186 0.94282 -0.370958 1.0000000 1.9712e-24 hypomethylated 1.0000 9.8561e-22 hypomethylated 1.000000 2.1715e-11 hypomethylated 1 1.0857e-08 hypomethylated -0.324557 5.3123e-07 hypomethylated 0.00026561 hypomethylated 0.61716 0.59722 -0.011373 10 0.65044 0.66448 -0.014040 8.9005e-01 0.4773552 insignificant 1.0000e+00 1 insignificant 9.7638e-01 0.180750 insignificant 1.00000000 1 insignificant -0.054466 0.5028568 insignificant 1.00000 insignificant 0.61716 0.96023 -0.319260 11 0.65044 0.94282 -0.292378 1.0000e+00 2.0615e-10 hypomethylated 1.0000e+00 1.0307e-07 hypomethylated 1.0000000 3.3465e-12 hypomethylated 1 1.6732e-09 hypomethylated -0.334220 0.00019486 hypomethylated 0.097431 hypomethylated 0.59722 0.96023 -0.332797 10 0.66448 0.94282 -0.278337 1.00000 7.1370e-11 hypomethylated 1 2.3790e-08 hypomethylated 1.00000 1.3900e-08 hypomethylated 1 6.9499e-06 hypomethylated -0.279754 0.0017604 weaklyHypometh 0.58697 insignificant chr1 81739847 81740847 5245 ENSG00000181703 0.90465 340 11 0.57796 152 11 0.62935 172 11 0.96030 274 11 0.52026 340 11 0.89899 159 11 0.61575 364 11 0.45806 191 9 0.53449 235 11 0.42261 166 11 0.53454 479 11 0.48165 343 11 0.53466 335 11 NA 0 0 0.53261 435 11 0.41989 455 11 0.43652 220 11 0.95330 290 11 0.49905 281 10 0.82720 202 11 0.31801 68 6 0.83232 73 10 0.72961 235 11 0.38015 97 7 0.93182 92 10 0.49537 172 11 0.71370 117 10 0.49910 59 6 0.36441 148 6 0.64894 131 11 0.48172 92 8 0.90479 278 11 0.52872 60 9 0.55182 199 11 0.71706 87 6 0.85159 108 10 0.613290 104 10 0.71429 90 11 0.90397 464 11 0.91577 296 11 0.93928 425 11 0.97092 364 11 0.98279 387 11 0.88688 0.47738 0.47988 0.95465 0.32353 0.87582 0.46644 0.31851 0.42171 0.29848 0.37789 0.28133 0.37701 NA 0.32513 0.25088 0.27506 0.94204 0.34218 0.78441 0.31811 0.88584 0.63213 0.31961 0.92007 0.32865 0.76658 0.56679 0.22232 0.55046 0.35971 0.90264 0.417958 0.38954 0.76206 0.80256 0.594513 0.594989 0.87203 0.88998 0.92066 0.97005 0.97898 6 0.45334 0.61716 -0.1086315 11 0.57186 0.65044 -0.078580 0.223236 0.0020555 weaklyHypometh 1 0.7966 insignificant 0.023607 0.31568 inconclusive 1 1 insignificant 0.009663 0.899516 insignificant 1 insignificant 0.45334 0.59722 -0.147516 10 0.57186 0.66448 -0.092620 3.1753e-01 0.0018266 weaklyHypometh 1.0000e+00 0.60887 insignificant 9.3648e-01 0.031047 weaklyHypometh 1.0000e+00 1 insignificant -0.044803 0.5083126 insignificant 1 insignificant 0.45334 0.96023 -0.401532 11 0.57186 0.94282 -0.370958 1.0000000 1.9712e-24 hypomethylated 1.0000 9.8561e-22 hypomethylated 1.000000 2.1715e-11 hypomethylated 1 1.0857e-08 hypomethylated -0.324557 5.3123e-07 hypomethylated 0.00026561 hypomethylated 0.61716 0.59722 -0.011373 10 0.65044 0.66448 -0.014040 8.9005e-01 0.4773552 insignificant 1.0000e+00 1 insignificant 9.7638e-01 0.180750 insignificant 1.00000000 1 insignificant -0.054466 0.5028568 insignificant 1.00000 insignificant 0.61716 0.96023 -0.319260 11 0.65044 0.94282 -0.292378 1.0000e+00 2.0615e-10 hypomethylated 1.0000e+00 1.0307e-07 hypomethylated 1.0000000 3.3465e-12 hypomethylated 1 1.6732e-09 hypomethylated -0.334220 0.00019486 hypomethylated 0.097431 hypomethylated 0.59722 0.96023 -0.332797 10 0.66448 0.94282 -0.278337 1.00000 7.1370e-11 hypomethylated 1 2.3790e-08 hypomethylated 1.00000 1.3900e-08 hypomethylated 1 6.9499e-06 hypomethylated -0.279754 0.0017604 weaklyHypometh 0.58697 insignificant chr1 82505285 82506285 5487 LPHN2 ENSG00000117114 0.98800 70 5 0.76748 333 5 0.76488 114 5 0.90512 60 4 0.86132 94 5 0.86639 171 5 0.80977 127 5 0.90159 111 5 0.88762 83 5 0.94048 61 5 0.91382 279 5 0.86182 29 3 0.95833 64 5 0.91156 48 5 0.88380 103 5 0.88889 73 5 NA 0 0 0.31897 60 1 0.77915 97 1 0.83773 147 7 0.90761 37 1 0.85697 33 5 0.94310 149 5 0.96958 50 5 0.98750 24 1 0.80750 279 5 0.88642 124 5 0.91479 47 5 0.88204 81 5 0.95345 270 5 0.89983 207 5 0.90000 227 5 0.05121 215 5 0.42500 107 5 0.57653 127 5 NA 0 0 0.090544 300 7 0.02915 270 5 0.53255 202 5 0.74904 163 5 0.89373 59 1 0.90000 48 1 0.78673 122 5 0.96353 0.77052 0.70057 0.94106 0.88104 0.86909 0.88371 0.88715 0.82838 0.91036 0.91224 0.88592 0.88644 0.76937 0.87537 0.59477 NA NA 0.82499 0.86836 0.79049 0.83720 0.97211 0.94569 0.96201 0.93761 0.89373 0.80736 0.91918 0.94703 0.90956 0.89011 0.025103 0.20833 0.31583 NA 0.032754 0.023233 0.68812 0.77343 0.80273 0.69608 0.76504 1 0.85452 0.91361 -0.0586562 5 0.78796 0.91981 -0.131848 0.999927 0.0023898 weaklyHypometh 1 0.7966 insignificant 0.988689 0.10313 insignificant 1 1 insignificant -0.064501 0.081414 lowCoverage 1 lowCoverage 0.85526 0.13837 0.737727 5 0.85291 0.18579 0.667118 1.6043e-37 1.0000000 hypermethylated 1.6043e-34 1.00000 hypermethylated 6.2372e-09 1.000000 hypermethylated 6.2372e-06 1 hypermethylated 0.610077 0.0040222 lowCoverage 1 lowCoverage 0.85452 0.72054 0.133755 5 0.78796 0.70060 0.087364 0.0000627 9.2355e-01 weaklyHypermeth 0.0627 1.0000e+00 weaklyHypermeth 0.076616 9.7303e-01 insignificant 1 1.0000e+00 insignificant 0.072154 3.6859e-01 lowCoverage 1.00000000 lowCoverage 0.91333 0.13837 0.782769 5 0.90835 0.18579 0.722564 8.7893e-33 1.0000000 hypermethylated 8.7893e-30 1 hypermethylated 1.4479e-07 1.000000 hypermethylated 0.00014479 1 hypermethylated 0.674578 0.0035214 lowCoverage 0.77989 lowCoverage 0.91361 0.72054 0.192820 5 0.91981 0.70060 0.219213 5.6139e-14 9.9814e-01 weaklyHypermeth 2.8069e-11 1.0000e+00 weaklyHypermeth 0.0085301 9.9702e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.136655 0.11011147 lowCoverage 1.000000 lowCoverage 0.13837 0.72175 -0.609250 5 0.18579 0.80068 -0.614892 1.00000 2.1653e-11 hypomethylated 1 2.1653e-08 hypomethylated 1.00000 3.3718e-04 hypomethylated 1 5.9659e-02 hypomethylated -0.537923 0.0051006 lowCoverage 0.85010 lowCoverage chr1 83345012 83346012 5671 LPHN2 ENSG00000117114 0.90132 230 7 0.74621 212 7 0.83200 175 7 0.78086 182 6 0.87500 70 5 0.63153 366 7 0.94424 86 5 0.83031 149 6 0.94080 72 5 0.72656 72 5 0.82923 222 5 0.76000 26 5 0.76361 93 5 0.84127 40 5 0.97778 91 5 0.40000 14 0 NA 0 0 0.70624 213 6 0.96846 173 5 0.72208 341 7 0.88426 32 3 0.71471 55 3 0.80263 222 7 0.79665 119 5 0.82802 52 4 0.76231 217 7 0.94804 152 5 0.75000 59 5 0.84889 201 5 0.89411 263 7 0.77306 252 7 0.80939 454 8 0.77868 185 7 0.67409 106 5 0.82508 488 7 0.60000 5 0 0.946226 115 5 0.77904 288 7 0.79459 350 6 0.90535 260 6 0.80071 196 6 0.92187 135 4 0.88456 266 6 0.92383 0.87341 0.89956 0.98751 1.00000 0.88868 0.94765 0.88172 0.93276 0.95288 0.92592 0.69524 0.97251 0.98677 0.97178 0.23810 NA 0.91934 0.95987 0.92810 0.90146 0.83688 0.95247 0.96846 0.89733 0.93332 0.93405 1.00000 0.94695 0.95354 0.91752 0.94980 0.825450 0.81623 0.96032 0.61905 0.944439 0.800991 0.94643 0.97730 0.92319 0.99584 0.96064 3 0.86877 0.87151 -0.0156454 6 0.75344 0.77914 -0.025706 0.963748 0.1242640 insignificant 1 1.0000 insignificant 0.849147 0.54606 insignificant 1 1 insignificant -0.018855 0.612624 insignificant 1 insignificant 0.86877 0.85173 0.029309 6 0.75344 0.76762 -0.014185 3.8045e-01 0.7296311 insignificant 1.0000e+00 1.00000 insignificant 2.3097e-01 0.771602 insignificant 1.0000e+00 1 insignificant 0.031632 0.5995868 insignificant 1 insignificant 0.86877 0.86247 -0.027465 6 0.75344 0.82361 -0.070171 0.9958074 6.5397e-02 insignificant 1.0000 1.0000e+00 insignificant 0.998343 1.0804e-01 insignificant 1 1.0000e+00 insignificant -0.062603 1.4806e-01 insignificant 1.00000000 insignificant 0.87151 0.85173 0.043952 7 0.77914 0.76762 0.011521 2.8257e-02 0.8462728 weaklyHypermeth 1.0000e+00 1 insignificant 1.3405e-01 0.857608 insignificant 1.00000000 1 insignificant 0.050487 0.3723431 insignificant 1.00000 insignificant 0.87151 0.86247 -0.013292 6 0.77914 0.82361 -0.044465 9.8792e-01 5.8770e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9960250 1.4451e-01 insignificant 1 1.0000e+00 insignificant -0.043748 0.21934752 insignificant 1.000000 insignificant 0.85173 0.86247 -0.051978 6 0.76762 0.82361 -0.055986 0.98024 1.3415e-01 insignificant 1 1.0000e+00 insignificant 0.99675 9.1254e-02 insignificant 1 1.0000e+00 insignificant -0.094235 0.1324026 insignificant 1.00000 insignificant chr1 83419556 83420556 5684 LPHN2 ENSG00000117114 0.75294 228 5 0.59201 64 5 0.53605 98 5 0.77424 78 5 0.78692 48 4 0.73290 198 5 0.67493 80 5 0.71758 67 5 0.62667 73 5 0.67556 48 5 0.72407 152 5 0.82219 79 5 0.51111 85 5 NA 0 0 0.66992 78 5 0.64000 52 5 0.54694 75 5 0.77185 105 5 0.60143 95 5 0.73515 202 5 0.81333 33 5 0.76727 52 5 0.70083 64 5 0.68345 73 5 0.65000 16 0 0.66774 69 5 0.73500 34 5 0.72500 33 5 0.62844 47 5 0.72775 68 5 0.67805 75 5 0.59748 298 5 0.68221 94 5 0.64673 59 5 0.72508 83 5 0.81000 21 1 0.843077 57 5 0.75248 50 5 0.78595 197 5 0.76909 242 5 0.74094 152 5 0.80022 178 5 0.79571 165 5 0.76475 0.59671 0.55444 0.78986 0.79934 0.73562 0.69340 0.71743 0.64483 0.66835 0.72575 0.83126 0.53275 NA 0.68333 0.66059 0.54998 0.79389 0.60943 0.74679 0.82805 0.78621 0.72270 0.69412 0.66379 0.68138 0.75586 0.75517 0.63678 0.73270 0.67920 0.62199 0.694643 0.63080 0.74308 0.80690 0.858515 0.751543 0.79668 0.77170 0.76003 0.80720 0.79525 3 0.69449 0.67169 0.0233538 5 0.69152 0.66818 0.023335 0.082698 0.6149865 insignificant 1 1.0000 insignificant 0.538888 0.13217 insignificant 1 1 insignificant -0.019313 0.482646 lowCoverage 1 lowCoverage 0.69449 0.73626 -0.041715 5 0.69152 0.73173 -0.040218 9.6904e-01 0.1372565 insignificant 1.0000e+00 1.00000 insignificant 9.8351e-01 0.055247 insignificant 1.0000e+00 1 insignificant -0.064714 0.1098711 lowCoverage 1 lowCoverage 0.69449 0.78051 -0.085619 5 0.69152 0.77943 -0.087915 0.9996410 1.5542e-03 weaklyHypometh 1.0000 5.1806e-01 insignificant 0.999955 4.5183e-04 weaklyHypometh 1 1.5061e-01 insignificant -0.099835 3.3008e-04 lowCoverage 0.11002746 lowCoverage 0.67169 0.73626 -0.068170 5 0.66818 0.73173 -0.063553 9.0987e-01 0.0020426 weaklyHypometh 1.0000e+00 1 insignificant 8.0879e-01 0.025723 weaklyHypometh 1.00000000 1 insignificant -0.045401 0.2302494 lowCoverage 1.00000 lowCoverage 0.67169 0.78051 -0.110440 5 0.66818 0.77943 -0.111249 9.9838e-01 1.7011e-04 weaklyHypometh 1.0000e+00 5.6702e-02 weaklyHypometh 0.9972648 6.0788e-03 weaklyHypometh 1 1.0000e+00 insignificant -0.080522 0.00131699 lowCoverage 0.438996 lowCoverage 0.73626 0.78051 -0.046888 5 0.73173 0.77943 -0.047697 0.98317 6.8100e-02 insignificant 1 1.0000e+00 insignificant 0.99245 2.0140e-01 insignificant 1 1.0000e+00 insignificant -0.035122 0.3177411 lowCoverage 1.00000 lowCoverage chr1 84591721 84592721 5868 SAMD13 ENSG00000203943 0.82729 212 7 0.64436 133 7 0.60360 136 7 0.76478 166 7 0.74206 66 7 0.70070 360 7 0.79676 102 7 0.66712 118 7 0.68831 112 7 0.80078 84 4 0.66569 194 7 0.85642 62 7 0.76689 108 7 0.72917 18 1 0.67970 121 7 0.60945 81 4 0.83259 66 4 0.64562 165 7 0.78274 109 7 0.74358 293 7 0.82346 43 4 0.76532 65 6 0.70762 109 7 0.59699 91 4 0.82315 74 7 0.73897 186 7 0.77564 62 5 0.85170 38 3 0.78009 115 7 0.75458 218 7 0.70942 195 7 0.75185 444 7 0.46442 116 7 0.55399 117 7 0.71256 134 7 0.76037 50 4 0.564656 90 6 0.65958 134 7 0.67148 186 7 0.64766 200 7 0.69717 171 7 0.78273 152 7 0.68370 188 7 0.83533 0.71815 0.67589 0.78775 0.81574 0.77857 0.83242 0.73334 0.75798 0.75862 0.74243 0.85815 0.79628 0.70652 0.72693 0.67904 0.81101 0.73817 0.80786 0.79712 0.81911 0.77824 0.77246 0.72737 0.86539 0.74903 0.81248 0.83650 0.79923 0.80309 0.76815 0.75457 0.596068 0.59670 0.74526 0.76486 0.657933 0.764006 0.77130 0.72231 0.74694 0.80322 0.73813 3 0.73984 0.74756 -0.0027587 7 0.76180 0.75045 0.011346 0.762215 0.5049625 insignificant 1 1.0000 insignificant 0.975370 0.27619 insignificant 1 1 insignificant -0.029185 0.266919 insignificant 1 insignificant 0.73984 0.65835 0.085946 7 0.76180 0.60841 0.153388 8.9154e-06 0.9997772 weaklyHypermeth 1.2736e-03 1.00000 weaklyHypermeth 7.1705e-03 0.996115 weaklyHypermeth 7.9672e-01 1 insignificant 0.108118 0.0634437 insignificant 1 insignificant 0.73934 0.71237 0.021626 7 0.71415 0.68697 0.027171 0.0832501 9.3251e-01 insignificant 1.0000 1.0000e+00 insignificant 0.160346 8.2786e-01 insignificant 1 1.0000e+00 insignificant 0.030836 3.0910e-01 insignificant 1.00000000 insignificant 0.74756 0.65835 0.090159 7 0.75045 0.60841 0.142041 2.7827e-04 0.9454521 weaklyHypermeth 2.7827e-02 1 weaklyHypermeth 5.7889e-04 0.994340 weaklyHypermeth 0.09941492 1 weaklyHypermeth 0.137303 0.0273750 weaklyHypermeth 1.00000 insignificant 0.74647 0.71237 0.027886 7 0.71486 0.68697 0.027889 1.3996e-02 3.4663e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0251738 8.3875e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.060021 0.07436241 insignificant 1.000000 insignificant 0.66091 0.71237 -0.059487 7 0.63938 0.68697 -0.047593 0.96443 6.2770e-02 insignificant 1 1.0000e+00 insignificant 0.99003 5.8621e-02 insignificant 1 1.0000e+00 insignificant -0.077282 0.1700887 insignificant 1.00000 insignificant chr1 87511256 87512256 6038 ENSG00000221222 0.82558 419 14 0.81601 387 14 0.74491 195 13 0.85249 220 11 0.77503 125 14 0.72839 376 14 0.73228 164 13 0.71747 269 13 0.70484 146 11 0.83714 220 14 0.79283 513 14 0.780043 95 10 0.79356 272 12 0.81818 22 2 0.82110 209 13 0.75470 131 9 0.828434 108 12 0.84743 298 14 0.83044 306 14 0.82689 348 14 0.76593 90 9 0.78801 84 8 0.85834 302 14 0.85534 104 11 0.87160 84 8 0.82128 448 14 0.86875 136 9 0.79274 51 3 0.85729 287 13 0.80268 444 14 0.77290 395 14 0.84504 548 14 0.66358 280 13 0.70140 330 14 0.73768 282 14 0.72952 76 7 0.86122 104 9 0.78136 441 14 0.84452 415 14 0.85191 424 14 0.85065 299 11 0.77313 313 11 0.81384 360 11 0.81792 0.78876 0.73672 0.85755 0.78729 0.78438 0.74375 0.74756 0.73644 0.87655 0.79566 0.75414 0.85014 NA 0.82389 0.79357 0.847105 0.82604 0.84548 0.81594 0.84374 0.81956 0.869013 0.83097 0.85529 0.81169 0.82531 0.81499 0.84715 0.81838 0.75999 0.82360 0.68151 0.68768 0.70301 0.71873 0.86256 0.76378 0.83972 0.84710 0.84530 0.79449 0.82620 4 0.81754 0.86714 -0.019869 14 0.78552 0.80893 -0.023414 0.99759 0.0042504 weaklyHypometh 1 1 insignificant 0.99882 0.0052421 weaklyHypometh 1 1 insignificant -0.033604 0.036905 weaklyHypometh 1 insignificant 0.81767 0.77925 0.071719 14 0.80591 0.74693 0.058985 6.3009e-10 9.9900e-01 weaklyHypermeth 9.0013e-08 1.0000000 weaklyHypermeth 0.00041709 0.994307 weaklyHypermeth 0.046343 1 weaklyHypermeth 0.045593 0.175272 insignificant 1 insignificant 0.81767 0.79956 -0.031830 14 0.80591 0.83775 -0.0318379 0.99970765 5.9481e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9989252 0.01987814 weaklyHypometh 1.00000 1.00000 insignificant -0.035423 0.08801106 insignificant 1.00000 insignificant 0.86738 0.77925 0.094578 14 0.83100 0.74693 0.084071 4.9131e-12 1.0000e+00 weaklyHypermeth 1.6377e-09 1.0000000 weaklyHypermeth 1.6188e-05 1.00000 weaklyHypermeth 0.0032377 1 weaklyHypermeth 0.079197 0.0360793 weaklyHypermeth 1.00000 insignificant 0.86738 0.79956 -0.0122505 14 0.83100 0.83775 -0.0067515 8.9533e-01 1.9641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2248e-01 0.54959785 insignificant 1.0000000 1.00000 insignificant -0.0018190 0.92522590 insignificant 1.00000 insignificant 0.77925 0.79956 -0.101557 14 0.74693 0.83775 -0.090823 1.00000 2.7106e-07 weaklyHypometh 1 0.00013553 weaklyHypometh 0.99996 6.5193e-05 weaklyHypometh 1 0.032596 weaklyHypometh -0.081016 0.0363835 weaklyHypometh 1.00000 insignificant chr1 89341469 89342469 6540 GBP1 ENSG00000117228 0.78882 182 7 0.61678 122 7 0.72696 107 7 0.81549 181 7 0.69404 66 4 0.75424 256 7 0.70860 117 7 0.74083 117 7 0.78095 76 4 0.69486 85 7 0.82962 193 7 0.708333 53 4 0.78853 120 7 0.76429 37 4 0.70637 106 7 0.81602 62 7 0.585807 40 4 0.84553 168 7 0.85235 124 7 0.75949 220 7 0.97314 59 6 0.67543 62 6 0.73536 109 7 0.77922 51 3 0.80417 53 6 0.74498 219 7 0.81151 54 4 0.82142 50 3 0.77800 103 7 0.78368 168 7 0.70424 138 7 0.71867 285 7 0.57447 118 7 0.62312 93 7 0.70824 141 7 0.59524 23 3 0.66837 74 7 0.73988 154 7 0.68355 191 7 0.78994 200 7 0.79423 178 7 0.86213 173 7 0.83520 173 7 0.82765 0.66415 0.74429 0.87296 0.67215 0.75870 0.68979 0.82344 0.81105 0.76661 0.88721 0.76854 0.79113 0.78489 0.83776 0.83522 0.666891 0.82866 0.86561 0.78958 0.95413 0.79968 0.776084 0.82920 0.83905 0.80388 0.75218 0.79461 0.86437 0.85039 0.77022 0.80360 0.68389 0.59385 0.69987 0.54536 0.68040 0.74377 0.85183 0.86332 0.87955 0.90752 0.84133 3 0.77549 0.81125 -0.031190 7 0.79108 0.71186 0.079223 0.97541 0.0889349 insignificant 1 1 insignificant 0.86084 0.1095638 insignificant 1 1 insignificant -0.028590 0.304091 insignificant 1 insignificant 0.77530 0.70813 0.067811 7 0.78051 0.60493 0.175584 1.0968e-03 9.7495e-01 weaklyHypermeth 5.7727e-02 1.0000000 weaklyHypermeth 0.00015660 0.957458 weaklyHypermeth 0.026101 1 weaklyHypermeth 0.097343 0.012035 weaklyHypermeth 1 insignificant 0.77503 0.80874 -0.053874 7 0.76786 0.78899 -0.0211293 0.93060853 1.7209e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9624578 0.03665393 weaklyHypometh 1.00000 1.00000 insignificant -0.044114 0.24369285 insignificant 1.00000 insignificant 0.81143 0.70813 0.098526 7 0.68149 0.60493 0.076556 2.8313e-06 9.9956e-01 weaklyHypermeth 2.1779e-04 1.0000000 weaklyHypermeth 2.5845e-04 0.99964 weaklyHypermeth 0.0323057 1 weaklyHypermeth 0.125933 0.0034831 weaklyHypermeth 0.40616 insignificant 0.81157 0.80874 -0.0235705 7 0.71688 0.78899 -0.0721173 9.5444e-01 1.8538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6760e-01 0.55586300 insignificant 1.0000000 1.00000 insignificant -0.0155242 0.68998378 insignificant 1.00000 insignificant 0.70813 0.80853 -0.122700 7 0.60493 0.76262 -0.157688 0.99442 1.8160e-05 weaklyHypometh 1 0.00227004 weaklyHypometh 0.95583 9.9979e-04 weaklyHypometh 1 0.249948 insignificant -0.141457 0.0073884 weaklyHypometh 0.73884 insignificant chr1 92679798 92680798 6867 ENSG00000211254 0.45482 189 8 0.24350 154 11 0.17225 101 11 0.53935 115 2 0.26818 54 9 0.21024 151 10 0.26776 150 8 0.34115 71 7 0.18324 110 11 0.20259 136 9 0.36975 145 11 0.075419 193 11 0.65993 94 7 0.20000 9 0 0.43248 137 7 0.15664 109 11 0.076152 158 9 0.32748 166 8 0.40191 173 11 0.50435 156 11 0.28250 46 5 0.25000 10 0 0.11543 144 8 0.12469 42 6 0.42857 77 2 0.34068 127 11 0.18883 44 4 0.20635 25 3 0.17806 81 6 0.52730 169 11 0.44342 157 11 0.18303 181 11 0.41677 167 11 0.52238 174 11 0.32494 133 7 0.49819 108 3 0.28225 48 2 0.52731 166 11 0.55710 149 8 0.48808 120 4 0.51420 161 2 0.43838 78 8 0.44351 118 4 0.45073 0.24345 0.27074 0.46564 0.40459 0.27775 0.32559 0.37701 0.10482 0.27029 0.44857 0.07192 0.74447 NA 0.59806 0.27534 0.041336 0.37682 0.49905 0.50099 0.28298 0.48308 0.087186 0.12753 0.43157 0.40721 0.29353 0.32124 0.24258 0.44867 0.42747 0.19400 0.41216 0.58918 0.56834 0.50145 0.42760 0.69580 0.51232 0.51521 0.47290 0.50789 0.47654 0 0.34358 0.32276 0.035046 10 0.32325 0.31037 0.012875 0.69445 0.9857778 insignificant 1 1 insignificant 0.52443 0.9999888 insignificant 1 1 insignificant 0.031954 0.547138 insignificant 1 insignificant 0.35081 0.57161 -0.181656 10 0.42271 0.40878 0.013930 1.0000e+00 1.8724e-06 weaklyHypometh 1.0000e+00 0.0018724 weaklyHypometh 0.98819094 0.031431 weaklyHypometh 1.000000 1 insignificant -0.124282 0.044568 weaklyHypometh 1 insignificant 0.35030 0.56070 -0.150354 8 0.31775 0.52260 -0.2048564 0.99999996 7.5775e-09 weaklyHypometh 1.00000 7.5775e-06 weaklyHypometh 0.9999796 0.00039024 weaklyHypometh 1.00000 0.39024 insignificant -0.183895 0.00023716 weaklyHypometh 0.15902 insignificant 0.32420 0.57161 -0.216603 10 0.36741 0.40878 -0.041368 9.9968e-01 1.9522e-06 hypomethylated 1.0000e+00 0.0019522 hypomethylated 9.9874e-01 0.00987 weaklyHypometh 1.0000000 1 insignificant -0.156236 0.0187653 weaklyHypometh 1.00000 insignificant 0.32326 0.56070 -0.1975225 8 0.29785 0.52260 -0.2247541 1.0000e+00 8.0748e-08 weaklyHypometh 1.0000e+00 8.0748e-05 weaklyHypometh 1.0000e+00 0.00035073 weaklyHypometh 1.0000000 0.35073 insignificant -0.2158489 0.00022289 hypomethylated 0.22289 insignificant 0.57305 0.56070 0.061882 8 0.48310 0.52260 -0.039501 0.67710 2.5138e-01 insignificant 1 1.00000000 insignificant 0.64999 4.2299e-01 insignificant 1 1.000000 insignificant -0.059613 0.2567414 insignificant 1.00000 insignificant chr1 94338890 94339890 6921 ENSG00000216267 0.89953 390 6 0.82133 265 6 0.54611 177 6 0.86950 391 6 0.78877 65 5 0.84782 384 6 0.79825 78 6 0.87572 241 6 0.82033 172 6 0.88719 188 6 0.87388 252 6 0.377055 83 6 0.94130 323 6 0.72754 143 6 0.81707 174 6 0.48810 25 2 0.418519 16 2 0.75730 441 6 0.91102 151 6 0.88399 258 6 0.92338 93 6 0.75618 207 6 0.63846 157 6 0.80040 108 6 0.90893 74 6 0.88874 286 6 0.85800 131 6 0.87687 82 6 0.84542 203 6 0.93123 364 6 0.89758 304 6 0.91294 290 6 0.46414 288 6 0.62620 97 6 0.66667 59 3 0.66094 51 6 0.79530 167 6 0.57685 327 6 0.83168 252 6 0.69086 323 6 0.77771 307 6 0.28152 301 6 0.82573 253 6 0.90135 0.80552 0.54555 0.86537 0.80523 0.83674 0.77611 0.86563 0.81276 0.87044 0.87182 0.38573 0.93631 0.71312 0.81098 0.52083 0.598603 0.69113 0.89890 0.86409 0.93419 0.73018 0.726913 0.79843 0.88819 0.88740 0.83751 0.81978 0.83691 0.92748 0.88595 0.90468 0.46186 0.59905 0.52164 0.66976 0.80064 0.53415 0.78900 0.70953 0.72458 0.28000 0.81423 6 0.81902 0.86510 -0.046679 6 0.84837 0.74607 0.102294 0.99984 0.0225873 weaklyHypometh 1 1 insignificant 0.99949 0.0051137 weaklyHypometh 1 1 insignificant -0.085662 0.068317 insignificant 1 insignificant 0.81902 0.57735 0.242613 6 0.84837 0.66082 0.187541 1.8187e-08 1.0000e+00 hypermethylated 2.0208e-06 1.0000000 hypermethylated 0.00372376 0.987976 weaklyHypermeth 0.286443 1 insignificant 0.135833 0.037525 weaklyHypermeth 1 insignificant 0.81902 0.66365 0.158965 6 0.84837 0.67730 0.1710699 0.00001484 1.0000e+00 weaklyHypermeth 0.00212 1.0000e+00 weaklyHypermeth 0.0051689 0.99999531 weaklyHypermeth 0.64611 1.00000 insignificant 0.086014 0.46832922 insignificant 1.00000 insignificant 0.86510 0.57735 0.288025 6 0.74607 0.66082 0.085246 8.9586e-10 1.0000e+00 hypermethylated 1.2798e-07 1.0000000 hypermethylated 2.8322e-05 0.99971 hypermethylated 0.0040459 1 hypermethylated 0.221495 0.0023718 weaklyHypermeth 0.39003 insignificant 0.86510 0.66365 0.2055711 6 0.74607 0.67730 0.0687755 1.5395e-07 9.8448e-01 hypermethylated 7.6976e-05 1.0000e+00 hypermethylated 3.2337e-06 0.99664401 hypermethylated 0.0032337 1.00000 hypermethylated 0.1716767 0.17326717 insignificant 1.00000 insignificant 0.57735 0.66365 -0.082514 6 0.66082 0.67730 -0.016471 0.81597 3.9937e-01 insignificant 1 1.00000000 insignificant 0.84792 6.8738e-01 insignificant 1 1.000000 insignificant -0.049818 0.6745172 insignificant 1.00000 insignificant chr1 95261542 95262542 6946 CNN3 ENSG00000117519 0.79333 54 5 0.67112 88 5 0.55833 45 5 0.47329 55 5 0.63021 42 4 0.71266 128 5 0.60000 18 1 0.69587 51 5 0.80000 11 0 0.77143 28 5 0.74842 129 5 0.750000 4 0 0.60333 28 1 0.61667 28 1 0.61667 36 5 1.00000 3 0 NA 0 0 0.73064 67 5 0.64708 55 5 0.70996 118 5 0.77381 37 4 0.70333 24 3 0.70000 32 1 0.68364 52 5 0.76944 43 5 0.63101 71 5 0.74778 46 5 0.76000 9 1 0.62923 45 4 0.75455 51 2 0.63767 76 5 0.67222 96 5 0.40506 70 5 0.77778 37 5 0.45079 131 5 0.80000 5 0 0.72500 38 5 0.59386 83 5 0.69697 34 1 0.66667 41 5 0.77020 47 5 0.74444 15 1 0.66667 42 5 0.84496 0.67505 0.51163 0.62309 0.74225 0.77714 0.72868 0.74647 0.86047 0.78140 0.73757 0.82002 0.70155 0.67829 0.70543 NA NA 0.78796 0.75291 0.77439 0.81063 0.63953 0.790698 0.72939 0.84173 0.73342 0.80233 0.76744 0.69123 0.80902 0.71621 0.74677 0.74898 0.80879 0.64928 0.86047 0.80814 0.67574 0.72939 0.77132 0.80056 0.72093 0.77409 0 0.71862 0.72509 -0.011453 5 0.72938 0.67663 0.052749 0.96236 0.7681453 insignificant 1 1 insignificant 0.98775 0.7357244 insignificant 1 1 insignificant -0.014223 0.644736 lowCoverage 1 lowCoverage 0.71862 0.66758 0.018097 5 0.72938 0.41238 0.316999 2.7627e-01 7.9171e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.22263680 0.723891 insignificant 1.000000 1 insignificant 0.065586 0.406730 lowCoverage 1 lowCoverage 0.71850 0.76536 -0.014899 2 0.72251 0.73220 -0.0096836 0.62229279 4.3191e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.9000127 0.49632153 lowCoverage 1.00000 1.00000 lowCoverage -0.017989 0.59684351 lowCoverage 1.00000 lowCoverage 0.72509 0.66758 0.032788 5 0.67663 0.41238 0.264250 1.4884e-01 9.3889e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.5544e-01 0.96108 insignificant 1.0000000 1 insignificant 0.079809 0.3073979 lowCoverage 1.00000 lowCoverage 0.72586 0.76536 -0.0051938 2 0.73551 0.73220 0.0033173 5.9768e-01 6.4820e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4838e-01 0.74317386 lowCoverage 1.0000000 1.00000 lowCoverage -0.0037659 0.88922111 lowCoverage 1.00000 lowCoverage 0.67500 0.76536 -0.036459 2 0.54985 0.73220 -0.182349 0.89105 3.3026e-01 lowCoverage 1 1.00000000 lowCoverage 0.86562 5.3387e-01 lowCoverage 1 1.000000 lowCoverage -0.083575 0.2923222 lowCoverage 1.00000 lowCoverage chr1 95807494 95808494 7020 ENSG00000216037 0.85664 476 16 0.84113 159 10 0.75149 145 12 0.83222 429 15 0.78251 82 7 0.83062 551 16 0.76714 128 9 0.77383 155 13 0.81118 114 9 0.86415 104 11 0.85346 251 16 0.80968 84 8 0.74639 184 10 NA 0 0 0.85864 127 12 0.86956 68 6 0.79673 91 6 0.89204 496 15 0.86923 186 14 0.80460 403 16 0.85045 60 4 0.76495 147 14 0.83185 245 16 0.82745 87 10 0.71683 90 7 0.83456 312 15 0.84985 112 12 0.76138 47 2 0.80997 171 11 0.86662 258 15 0.82963 243 14 0.86009 594 16 0.81051 155 13 0.73110 167 14 0.72762 238 16 0.89732 64 8 0.61659 61 6 0.78293 317 16 0.85660 365 15 0.86466 520 15 0.87331 423 15 0.92059 314 15 0.80608 509 15 0.83872 0.82870 0.75894 0.89547 0.87334 0.81419 0.83268 0.78705 0.85487 0.87276 0.82449 0.78754 0.77390 NA 0.81359 0.85023 0.87518 0.86718 0.87897 0.79448 0.83174 0.75073 0.82244 0.77361 0.83190 0.88695 0.84178 0.78265 0.89105 0.92370 0.88423 0.84726 0.80361 0.80116 0.78554 0.9203 0.65844 0.83156 0.88118 0.85246 0.88625 0.90048 0.86675 4 0.84054 0.85799 -0.0156830 15 0.85359 0.83353 0.0200657 0.87124 0.025803 weaklyHypometh 1 1 insignificant 0.81147 0.0213717 weaklyHypometh 1 1 insignificant 0.004675 0.780690 insignificant 1 insignificant 0.84054 0.78643 0.057869 16 0.85359 0.77501 0.078583 3.6219e-06 0.99015 weaklyHypermeth 0.00072438 1 weaklyHypermeth 0.0936518 0.94849 insignificant 1.0000 1 insignificant 0.060631 0.180540 insignificant 1 insignificant 0.84031 0.88034 -0.034414 15 0.83529 0.85685 -0.021561 0.98427 0.019812 weaklyHypometh 1 1 insignificant 0.95833 0.111652 insignificant 1 1 insignificant -0.042606 0.082665 insignificant 1 insignificant 0.85799 0.78643 0.073960 15 0.83353 0.77501 0.058517 5.1413e-08 0.99755 weaklyHypermeth 1.7138e-05 1 weaklyHypermeth 3.2128e-02 0.99309 weaklyHypermeth 1.000000 1 insignificant 0.055956 0.2164778 insignificant 1 insignificant 0.85823 0.88034 -0.0156822 15 0.84397 0.85685 -0.012885 0.83663 0.47892 insignificant 1 1 insignificant 0.41478 0.62127 insignificant 1 1 insignificant -0.047281 0.067925 insignificant 1 insignificant 0.78657 0.88034 -0.091853 15 0.76772 0.85685 -0.089133 0.99629 5.8139e-07 weaklyHypometh 1 0.00058139 weaklyHypometh 0.96480 0.04897455 weaklyHypometh 1 1.00000 insignificant -0.103237 0.0455091 weaklyHypometh 1 insignificant chr1 100074557 100075557 7665 ENSG00000202254 0.72571 118 5 0.57898 118 5 0.61905 53 5 0.71711 98 5 0.75463 36 3 0.67197 156 5 0.60036 46 5 0.65072 100 5 0.60422 45 5 0.66741 57 5 0.77285 176 5 0.45000 14 0 0.69792 63 5 0.65625 31 2 0.59940 43 5 0.85000 15 0 1.00000 5 0 0.85353 102 5 0.71022 97 5 0.57904 123 5 0.64461 37 5 0.69063 52 5 0.80941 64 5 0.69167 36 3 0.53295 55 5 0.69544 149 5 0.64019 62 5 0.56667 11 2 0.71081 89 5 0.71323 143 5 0.74611 113 5 0.73037 187 5 0.52513 78 5 0.72447 64 5 0.64039 84 5 0.65000 11 0 0.63836 47 2 0.59438 123 5 0.63204 91 5 0.78023 86 5 0.68373 95 5 0.70813 61 5 0.49632 101 5 0.72266 0.62940 0.46795 0.77521 0.71978 0.67669 0.62755 0.63466 0.61603 0.67019 0.72691 0.46703 0.72436 0.84615 0.76421 0.82418 1.00000 0.75733 0.71417 0.69934 0.48967 0.71194 0.80983 0.62363 0.65714 0.74475 0.63719 0.62872 0.74240 0.68848 0.68599 0.72505 0.53443 0.72871 0.64372 0.6456 0.62083 0.63789 0.63806 0.78514 0.62885 0.68417 0.80885 0 0.69452 0.70341 -0.0096353 5 0.69016 0.69746 -0.0073054 0.67454 0.482789 insignificant 1 1 insignificant 0.37459 0.8889834 insignificant 1 1 insignificant 0.006962 0.842596 lowCoverage 1 lowCoverage 0.69452 0.62162 0.071974 5 0.69016 0.60803 0.082132 2.4632e-04 0.93445 weaklyHypermeth 0.03518866 1 weaklyHypermeth 0.0039214 0.96511 weaklyHypermeth 0.5602 1 insignificant 0.059178 0.140197 lowCoverage 1 lowCoverage 0.69452 0.70737 -0.011477 5 0.69016 0.50517 0.184985 0.45953 0.921916 insignificant 1 1 insignificant 0.33743 0.986016 insignificant 1 1 insignificant 0.027879 0.625151 lowCoverage 1 lowCoverage 0.70341 0.62162 0.080708 5 0.69746 0.60803 0.089437 7.3730e-04 0.98969 weaklyHypermeth 1.0533e-01 1 insignificant 1.6865e-02 0.98754 weaklyHypermeth 1.000000 1 insignificant 0.052216 0.1596337 lowCoverage 1 lowCoverage 0.70341 0.70737 -0.0034556 5 0.69746 0.50517 0.192291 0.15928 0.82845 insignificant 1 1 insignificant 0.46398 0.92742 insignificant 1 1 insignificant 0.020917 0.703055 lowCoverage 1 lowCoverage 0.62162 0.70737 -0.082623 5 0.60803 0.50517 0.102853 0.57266 2.2664e-02 weaklyHypometh 1 1.00000000 insignificant 0.83712 0.19033870 insignificant 1 1.00000 insignificant -0.031299 0.5852264 lowCoverage 1 lowCoverage chr1 106736726 106737726 7929 ENSG00000217439 0.73466 342 9 0.68556 155 9 0.70749 144 9 0.68349 199 9 0.74444 57 4 0.74699 329 9 0.66892 140 9 0.67813 110 5 0.66866 119 8 0.66957 75 5 0.74284 227 9 0.76739 77 8 0.83395 120 5 0.80769 26 2 0.77639 136 9 0.65758 58 9 0.64871 112 8 0.81862 236 9 0.78611 215 9 0.73345 301 9 0.94198 52 5 0.81635 89 9 0.77910 153 9 0.82352 86 7 0.88135 81 9 0.72729 159 9 0.75581 66 5 0.80836 51 4 0.67338 130 5 0.72591 143 8 0.79330 139 5 0.73184 350 9 0.57498 98 8 0.72516 132 9 0.66422 166 9 0.62130 76 8 0.73755 64 5 0.66781 202 9 0.79758 295 9 0.78815 298 9 0.76954 225 9 0.75043 315 9 0.76276 338 9 0.78279 0.71988 0.75307 0.75981 0.85793 0.80007 0.73148 0.76113 0.74512 0.76369 0.83158 0.77539 0.85743 NA 0.82392 0.72729 0.68408 0.85993 0.82492 0.79316 0.90695 0.85411 0.85185 0.85011 0.92936 0.75177 0.74237 0.84026 0.80058 0.81464 0.85074 0.76588 0.63576 0.78381 0.73921 0.6687 0.74628 0.75303 0.84954 0.86557 0.83033 0.78460 0.84023 4 0.75519 0.79720 -0.0290887 9 0.75434 0.78450 -0.0301634 0.99937 0.039085 weaklyHypometh 1 1 insignificant 1.00000 0.0066429 weaklyHypometh 1 1 insignificant -0.060150 0.025724 weaklyHypometh 1 insignificant 0.75496 0.70867 0.053886 9 0.72704 0.67716 0.049888 3.5333e-04 0.98553 weaklyHypermeth 0.04416680 1 weaklyHypermeth 0.0038703 0.98007 weaklyHypermeth 0.5602 1 insignificant 0.062861 0.057072 insignificant 1 insignificant 0.75496 0.77702 -0.042847 9 0.72704 0.77102 -0.043974 0.99955 0.018460 weaklyHypometh 1 1 insignificant 0.99959 0.022192 weaklyHypometh 1 1 insignificant -0.045660 0.007508 weaklyHypometh 1 insignificant 0.79693 0.70867 0.085181 9 0.76056 0.67716 0.083402 2.1284e-06 0.99926 weaklyHypermeth 3.5474e-04 1 weaklyHypermeth 2.0542e-05 0.99999 weaklyHypermeth 0.020542 1 weaklyHypermeth 0.123011 0.0028516 weaklyHypermeth 1 insignificant 0.79693 0.77702 -0.0153290 9 0.76056 0.77102 -0.010459 0.79943 0.51153 insignificant 1 1 insignificant 0.55597 0.87726 insignificant 1 1 insignificant 0.014490 0.538002 insignificant 1 insignificant 0.70867 0.77702 -0.095802 9 0.67716 0.77102 -0.093862 0.99997 9.1541e-05 weaklyHypometh 1 0.01525683 weaklyHypometh 0.99994 0.00023183 weaklyHypometh 1 0.23183 insignificant -0.108520 0.0061426 weaklyHypometh 1 insignificant chr1 110445984 110446984 8223 ALX3 ENSG00000156150 0.78531 115 4 0.75967 161 5 0.67879 45 4 0.85408 83 4 0.64848 41 3 0.85705 157 4 0.774444 49 4 0.82028 166 5 0.80118 61 4 0.87000 42 4 0.83672 215 5 0.68333 13 0 0.62000 140 4 0.80016 78 4 0.852525 50 4 0.66667 13 1 0.111111 6 0 0.595797 192 4 0.85804 326 5 0.79583 128 4 0.82675 92 5 0.737143 112 4 0.68148 40 5 0.96000 51 5 0.919255 71 4 0.887029 200 5 0.77040 131 5 0.47500 22 3 0.82658 210 5 0.914866 227 5 0.69315 214 5 0.93677 166 4 0.602957 176 5 0.591034 237 5 0.666667 45 3 0.45000 34 2 0.67930 81 5 0.60418 338 5 0.686095 95 4 0.784692 162 4 0.425543 88 4 0.621059 104 4 0.554735 66 4 0.79938 0.70809 0.67961 0.81553 0.608194 0.85426 0.692665 0.83267 0.86156 0.85777 0.88016 0.567152 0.758356 0.84787 0.765323 0.567068 0.482922 0.566998 0.78063 0.78660 0.853006 0.645123 0.54951 0.93495 0.915275 0.851847 0.78635 0.64442 0.80110 0.880601 0.792039 0.93047 0.519477 0.480028 0.543574 0.274272 0.73084 0.586930 0.590217 0.689108 0.481958 0.603087 0.535121 2 0.77271 0.82997 -0.0589474 4 0.77482 0.79109 -0.0162692 0.9922819 0.01483775 lowCoverage 1 1.00000 lowCoverage 0.99210372 0.089597 lowCoverage 1.00000 1 lowCoverage -0.0688955 0.225898 lowCoverage 1 lowCoverage 0.77275 0.549945 0.2378257 4 0.77979 0.59070 0.189089 1.3723e-07 0.99697636 lowCoverage 4.9011e-06 1.00000 lowCoverage 4.3043e-03 0.99894526 lowCoverage 1.2660e-01 1.00000 lowCoverage 0.13445017 1.5874e-02 lowCoverage 5.2913e-01 lowCoverage 0.77271 0.585603 0.1778639 4 0.77482 0.633450 0.1413709 2.9333e-05 9.9101e-01 lowCoverage 2.4980e-03 1.000000 lowCoverage 1.9207e-03 0.99733975 lowCoverage 1.4775e-01 1.00000 lowCoverage 0.1190488 1.3705e-01 lowCoverage 1.0000000 lowCoverage 0.83040 0.549945 0.3028100 5 0.84931 0.59070 0.258612 2.9638e-09 0.99997973 hypermethylated 1.7434e-07 1.00000 hypermethylated 4.6211e-04 0.999918 hypermethylated 0.02432164 1 hypermethylated 0.2033456 1.4264e-03 lowCoverage 0.07924414 lowCoverage 0.83008 0.586408 0.2416594 4 0.82093 0.685814 0.135120 3.2313e-06 0.99980794 lowCoverage 0.00040391 1.0000 lowCoverage 0.0013907 0.99979187 lowCoverage 0.15452 1.00000 lowCoverage 0.1879443 0.0333300 lowCoverage 1 lowCoverage 0.549945 0.585938 -0.0710036 4 0.59070 0.660140 -0.069444 0.8651255 1.5725e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.886823 2.3898e-01 lowCoverage 1 1.00000000 lowCoverage -0.0154013 0.8307698 lowCoverage 1.00000 lowCoverage chr1 110480767 110481767 8226 UBL4B ENSG00000186150 0.19208 203 6 0.12422 152 6 0.30095 142 6 0.13319 55 6 0.26187 83 7 0.12653 171 6 0.340667 164 6 0.14627 145 6 0.18461 154 6 0.19521 127 6 0.22222 196 6 0.17292 77 6 0.09941 182 6 0.00000 1 0 0.083333 144 6 0.25000 113 6 0.295899 110 6 0.092157 88 6 0.32146 121 6 0.11954 193 6 0.22525 70 6 0.016667 73 6 0.20968 248 6 0.11198 121 6 0.028571 41 6 0.052535 241 6 0.16378 65 6 0.17123 57 5 0.17124 114 6 0.091938 246 6 0.07419 240 6 0.39421 232 6 0.028155 165 6 0.041126 99 6 0.000000 198 6 0.00000 66 6 0.00000 97 6 0.04392 211 6 0.025600 193 6 0.031459 267 6 0.051282 83 6 0.057692 158 6 0.052859 88 6 0.18490 0.12639 0.27797 0.12897 0.246637 0.12034 0.246893 0.14606 0.19057 0.19735 0.23278 0.167078 0.101522 NA 0.071661 0.209193 0.251551 0.084959 0.19173 0.10686 0.163402 0.014658 0.21794 0.11809 0.029316 0.053487 0.14476 0.15767 0.15757 0.099250 0.077095 0.37276 0.023462 0.049502 0.000000 0.000000 0.00000 0.055701 0.024944 0.032909 0.043849 0.049486 0.060397 6 0.17398 0.15561 0.0202643 6 0.19790 0.15720 0.0406991 0.1921006 0.94322671 insignificant 1 1.00000 insignificant 0.01312760 0.999435 weaklyHypermeth 1.00000 1 insignificant 0.0405206 0.280198 insignificant 1 insignificant 0.17398 0.023923 0.1487591 6 0.19790 0.02049 0.177411 1.5002e-11 0.99999991 weaklyHypermeth 1.0001e-09 1.00000 weaklyHypermeth 1.6389e-10 0.99999999 weaklyHypermeth 8.1943e-08 1.00000 weaklyHypermeth 0.16426005 1.2391e-07 weaklyHypermeth 1.2391e-05 weaklyHypermeth 0.17398 0.040558 0.1337185 6 0.19790 0.037291 0.1606096 8.3489e-09 1.0000e+00 weaklyHypermeth 1.3521e-06 1.000000 weaklyHypermeth 1.6181e-08 1.00000000 weaklyHypermeth 1.6181e-05 1.00000 weaklyHypermeth 0.1393484 1.3944e-06 weaklyHypermeth 0.0013944 weaklyHypermeth 0.15561 0.023923 0.1284794 6 0.15720 0.02049 0.136712 7.6979e-07 0.99999506 weaklyHypermeth 3.0792e-05 1.00000 weaklyHypermeth 1.9962e-05 0.999996 weaklyHypermeth 0.00201501 1 weaklyHypermeth 0.1237394 1.8552e-03 weaklyHypermeth 0.08834222 weaklyHypermeth 0.15561 0.040558 0.1138128 6 0.15720 0.037291 0.119910 6.2651e-05 0.99999818 weaklyHypermeth 0.00522093 1.0000 weaklyHypermeth 0.0023499 0.99999417 weaklyHypermeth 0.21362 1.00000 insignificant 0.0988277 0.0079333 weaklyHypermeth 1 insignificant 0.023923 0.040558 -0.0146458 6 0.02049 0.037291 -0.016801 0.9394374 1.2078e-01 insignificant 1 1.0000e+00 insignificant 0.990097 2.1225e-01 insignificant 1 1.00000000 insignificant -0.0249117 0.0475016 weaklyHypometh 1.00000 insignificant chr1 110600504 110601504 8233 KCNC4 ENSG00000116396 0.96970 114 6 0.79762 35 2 0.65414 63 6 0.88889 42 1 0.82143 44 6 0.93533 81 6 0.968661 69 6 0.92063 43 6 1.00000 39 1 0.89110 67 6 0.93182 103 6 0.88763 65 6 0.82044 57 6 NA 0 0 0.946208 62 6 0.90741 58 6 0.969697 59 6 0.958333 29 1 1.00000 17 1 0.95252 105 6 0.93452 26 2 0.906746 38 6 0.72692 49 4 0.79167 25 1 0.761905 22 1 0.894444 46 6 0.82778 23 2 0.54167 16 0 0.80556 37 6 0.838426 63 6 0.77778 39 5 0.94733 203 6 0.849537 56 6 0.480556 49 6 0.858333 126 6 0.34632 46 6 0.69286 39 6 0.11429 69 5 0.953704 68 6 0.941017 79 6 0.943841 43 1 0.898810 106 6 0.780393 71 6 0.93645 0.78918 0.65604 0.90291 0.842349 0.92084 0.956933 0.90314 1.00000 0.90375 0.91391 0.892983 0.825069 NA 0.945446 0.932039 0.973522 0.912621 1.00000 0.95288 0.913662 0.867545 0.78267 0.83738 0.730467 0.887055 0.86893 0.56796 0.81165 0.853614 0.786408 0.94318 0.870415 0.522006 0.909223 0.349010 0.68340 0.099861 0.936893 0.940108 0.933200 0.893620 0.805589 1 0.90365 0.86882 0.0361579 6 0.90628 0.86583 0.0404406 0.0706841 0.99273983 insignificant 1 1.00000 insignificant 0.00090326 0.997530 weaklyHypermeth 0.90326 1 insignificant 0.0935013 0.021553 lowCoverage 1 lowCoverage 0.90365 0.605195 0.2967301 6 0.90628 0.61723 0.289050 3.2553e-10 0.99999999 hypermethylated 1.8085e-08 1.00000 hypermethylated 2.0557e-06 0.99999949 hypermethylated 2.9367e-04 1.00000 hypermethylated 0.34941524 3.4012e-02 lowCoverage 1.0000e+00 lowCoverage 0.90365 0.899183 0.0051070 6 0.90628 0.898143 0.0081324 6.1044e-01 8.4949e-01 insignificant 1.0000e+00 1.000000 insignificant 5.6615e-01 0.88303896 insignificant 1.0000e+00 1.00000 insignificant 0.0028439 9.4173e-01 lowCoverage 1.0000000 lowCoverage 0.86882 0.605195 0.2548460 6 0.86583 0.61723 0.248610 2.6079e-05 0.99991853 hypermethylated 8.4125e-04 1.00000 hypermethylated 2.7905e-03 0.998119 weaklyHypermeth 0.09966171 1 weaklyHypermeth 0.2559140 8.9758e-02 lowCoverage 1.00000000 lowCoverage 0.86882 0.899183 -0.0294259 6 0.86583 0.898143 -0.032308 9.5359e-01 0.37689444 insignificant 1.00000000 1.0000 insignificant 0.9955205 0.04427699 weaklyHypometh 1.00000 1.00000 insignificant -0.0906574 0.0694368 lowCoverage 1 lowCoverage 0.605195 0.899183 -0.2940853 6 0.61723 0.898143 -0.280918 0.9998225 1.1034e-03 weaklyHypometh 1 4.5975e-02 weaklyHypometh 0.999968 1.0613e-03 weaklyHypometh 1 0.09648325 weaklyHypometh -0.3465713 0.0345795 weaklyHypometh 1.00000 insignificant chr1 110639093 110640093 8238 ENSG00000200536 0.68065 64 2 0.66989 142 5 0.64500 76 5 0.78258 50 2 0.63317 62 5 0.65115 137 5 0.653830 70 5 0.90212 94 5 0.73270 87 5 0.60540 51 2 0.87586 149 5 0.65476 50 5 0.72565 93 5 0.82321 53 5 0.816393 77 5 0.82500 22 2 0.744758 674 2 0.792047 68 2 0.66301 49 2 0.86785 98 5 0.86301 50 3 0.655238 47 5 0.78070 34 2 0.72472 50 6 0.746667 20 2 0.877997 107 5 0.57404 61 5 0.57683 41 3 0.57414 38 2 0.646758 128 5 0.70139 103 5 0.66391 106 3 0.441439 107 5 0.496667 35 3 0.432828 71 2 0.40000 11 0 0.34349 84 5 0.42455 94 5 0.788633 81 2 0.589286 71 2 0.382716 55 2 0.410435 49 2 0.400000 39 2 0.68626 0.65010 0.70538 0.71301 0.803012 0.77396 0.656841 0.77650 0.56846 0.66890 0.86846 0.570853 0.639096 0.84713 0.734408 0.594758 0.947871 0.623518 0.80260 0.75933 0.817707 0.717665 0.77645 0.72051 0.704839 0.802803 0.80609 0.67617 0.69616 0.741644 0.742272 0.76583 0.493469 0.530242 0.620283 0.500000 0.47684 0.493658 0.617913 0.582157 0.564964 0.602041 0.497760 2 0.81764 0.76561 0.0467181 5 0.74273 0.75307 -0.0103357 0.2746773 0.67896188 insignificant 1 1.00000 insignificant 0.58223781 0.479908 insignificant 1.00000 1 insignificant 0.0384678 0.304862 lowCoverage 1 lowCoverage 0.81764 0.482587 0.3336241 5 0.74273 0.36533 0.377402 1.6373e-18 0.99999993 hypermethylated 2.3390e-16 1.00000 hypermethylated 3.4856e-05 0.99998205 hypermethylated 2.4897e-03 1.00000 hypermethylated 0.31408891 1.0523e-08 lowCoverage 1.7538e-06 lowCoverage 0.81995 0.589831 0.2304849 2 0.81855 0.667903 0.1506491 8.1898e-04 8.9859e-01 lowCoverage 5.4598e-02 1.000000 lowCoverage 1.5511e-02 0.80292058 lowCoverage 7.7553e-01 1.00000 lowCoverage 0.2230370 4.3866e-02 lowCoverage 1.0000000 lowCoverage 0.76561 0.482587 0.2900284 5 0.75307 0.36533 0.387737 1.9472e-13 1.00000000 hypermethylated 2.7817e-11 1.00000 hypermethylated 4.0536e-04 0.999998 hypermethylated 0.02252009 1 hypermethylated 0.2756211 1.1915e-06 lowCoverage 0.00013239 lowCoverage 0.76933 0.589831 0.1645401 2 0.77641 0.667903 0.108507 1.4786e-04 0.92646898 lowCoverage 0.01056143 1.0000 lowCoverage 0.0053355 0.87767030 lowCoverage 0.38111 1.00000 lowCoverage 0.1845693 0.0762254 lowCoverage 1 lowCoverage 0.486216 0.589831 -0.0766649 2 0.43840 0.667903 -0.229506 0.3598235 1.2882e-03 lowCoverage 1 5.1530e-02 lowCoverage 0.374487 2.4771e-01 lowCoverage 1 1.00000000 lowCoverage -0.0910519 0.3155267 lowCoverage 1.00000 lowCoverage chr1 112858262 112859262 8398 WNT2B ENSG00000134245 0.96391 274 6 0.91342 88 6 0.95310 125 6 0.94414 309 6 1.00000 69 6 0.93070 308 6 0.899311 75 6 0.95105 138 6 0.91004 134 6 0.92097 138 6 0.96116 316 6 0.80754 70 6 0.79141 135 6 0.96136 104 6 0.967280 221 6 0.93197 89 6 0.944444 16 3 0.948796 275 6 0.92816 258 6 0.94917 263 6 0.80952 44 4 0.887922 84 5 0.93247 141 6 0.95778 69 5 0.970779 44 5 0.952262 179 6 0.94343 68 4 0.96442 71 5 0.96506 149 6 0.933497 137 6 0.94968 96 6 0.81491 181 6 0.903854 116 6 1.000000 53 6 0.988889 89 6 0.95000 25 4 0.97403 66 6 0.79210 144 6 0.962381 214 6 0.960699 279 6 0.958425 246 6 0.956993 187 6 0.981944 174 6 0.96329 0.88457 0.94730 0.93062 1.000000 0.89743 0.845559 0.93964 0.90896 0.90591 0.92976 0.793228 0.908584 0.95728 0.963261 0.925595 0.951820 0.921280 0.92401 0.93471 0.967306 0.876803 0.89673 0.95474 0.949212 0.903244 0.92747 0.94193 0.97789 0.899511 0.949266 0.95424 0.882202 1.000000 0.992560 0.919643 0.96713 0.909581 0.962455 0.947798 0.933462 0.956359 0.968006 4 0.92952 0.93106 -0.0020430 6 0.94054 0.92235 0.0181905 0.4942900 0.39507686 insignificant 1 1.00000 insignificant 0.56212369 0.066073 insignificant 1.00000 1 insignificant 0.0054187 0.786316 insignificant 1 insignificant 0.92941 0.943205 -0.0139407 6 0.93310 0.89768 0.035423 6.7986e-01 0.14001029 insignificant 1.0000e+00 1.00000 insignificant 9.5879e-01 0.00939299 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.00591484 8.6607e-01 insignificant 1.0000e+00 insignificant 0.92952 0.960000 -0.0294865 6 0.94054 0.973086 -0.0325486 9.9917e-01 4.0450e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9939e-01 0.01971870 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0351916 7.7804e-03 weaklyHypometh 0.8644881 insignificant 0.93095 0.943205 -0.0104526 6 0.91264 0.89768 0.014958 6.0871e-01 0.11356584 insignificant 1.0000e+00 1.00000 insignificant 8.9742e-01 0.066138 insignificant 1.00000000 1 insignificant -0.0113336 7.5922e-01 insignificant 1.00000000 insignificant 0.93106 0.960000 -0.0238622 6 0.92235 0.973086 -0.050739 9.9898e-01 0.13654853 insignificant 1.00000000 1.0000 insignificant 0.9983213 0.50353275 insignificant 1.00000 1.00000 insignificant -0.0406104 0.0324633 weaklyHypometh 1 insignificant 0.943205 0.959964 -0.0140126 6 0.89768 0.969722 -0.072040 0.7969320 1.5973e-01 insignificant 1 1.0000e+00 insignificant 0.472681 8.9905e-01 insignificant 1 1.00000000 insignificant -0.0292768 0.4018511 insignificant 1.00000 insignificant chr1 113066324 113067324 8416 FAM19A3 ENSG00000184599 0.12722 844 20 0.11196 830 20 0.14564 889 20 0.13951 498 20 0.09468 544 20 0.25003 1068 20 0.099108 910 20 0.17185 899 20 0.15426 1074 20 0.14648 1125 20 0.14503 793 20 0.10135 891 20 0.13388 1107 20 0.15282 372 11 0.161784 1271 20 0.08964 737 20 0.074335 575 20 0.122300 714 18 0.12840 781 20 0.16665 829 20 0.09729 291 20 0.146754 424 18 0.16685 753 20 0.13725 416 20 0.113959 297 18 0.157238 1127 20 0.13308 470 20 0.07993 351 18 0.14323 650 20 0.113860 1165 20 0.17177 1017 20 0.11130 1273 20 0.175767 660 20 0.159439 470 20 0.042476 646 19 0.10323 202 13 0.16096 448 20 0.17464 934 20 0.196742 1047 20 0.154333 816 20 0.085710 596 18 0.096076 851 20 0.152721 832 18 0.10644 0.10115 0.13806 0.11548 0.084894 0.22478 0.092385 0.10913 0.10400 0.12800 0.14024 0.096025 0.074437 0.12007 0.103843 0.080967 0.070591 0.108404 0.11524 0.13920 0.096776 0.106567 0.14355 0.13216 0.112641 0.104581 0.11378 0.09208 0.12675 0.099139 0.158604 0.10693 0.167810 0.142057 0.064564 0.084216 0.13506 0.121748 0.149120 0.135995 0.079077 0.080655 0.135267 18 0.12650 0.14537 -0.0068321 20 0.18057 0.13381 0.0467684 0.3358227 0.21802935 insignificant 1 1.00000 insignificant 0.49268182 0.592666 insignificant 1.00000 1 insignificant 0.0048031 0.687944 insignificant 1 insignificant 0.12650 0.134821 -0.0033454 20 0.18057 0.13570 0.044870 2.8422e-01 0.00631131 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.8812e-02 0.12057563 insignificant 1.0000e+00 1.00000 insignificant -0.00023866 9.9212e-01 insignificant 1.0000e+00 insignificant 0.12640 0.144375 -0.0046697 20 0.14333 0.160350 -0.0170219 3.6907e-01 6.0250e-06 weaklyHypometh 1.0000e+00 0.006025 weaklyHypometh 4.5574e-01 0.02103363 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0012704 9.5647e-01 insignificant 1.0000000 insignificant 0.14537 0.134821 0.0031762 20 0.13381 0.13570 -0.001898 1.5556e-01 0.17603071 insignificant 1.0000e+00 1.00000 insignificant 3.4064e-01 0.279585 insignificant 1.00000000 1 insignificant -0.0050418 8.3425e-01 insignificant 1.00000000 insignificant 0.14532 0.144375 0.0021885 20 0.12853 0.160350 -0.031825 1.7315e-01 0.00260911 inconclusive 1.00000000 0.8697 insignificant 0.3500746 0.10318258 insignificant 1.00000 1.00000 insignificant -0.0060736 0.7936742 insignificant 1 insignificant 0.134862 0.144375 -0.0034255 20 0.14187 0.160350 -0.018477 0.5916431 8.2192e-02 insignificant 1 1.0000e+00 insignificant 0.810939 3.1695e-01 insignificant 1 1.00000000 insignificant -0.0010318 0.9731676 insignificant 1.00000 insignificant chr1 113234489 113235489 8418 ENSG00000216603 0.70476 130 5 0.76376 121 5 0.83333 22 4 0.94787 133 5 0.67857 36 5 0.91220 181 5 0.642857 11 0 0.91429 33 5 0.91667 24 4 0.75000 4 0 0.87905 125 5 1.00000 5 0 0.64286 32 5 0.80000 23 4 0.950000 17 0 NA 0 0 1.000000 1 0 0.753897 137 7 0.96667 58 5 0.99107 72 5 0.96429 21 1 1.000000 25 4 0.61111 55 5 1.00000 23 1 0.948880 105 5 0.880523 83 5 0.88929 60 4 1.00000 28 4 0.63385 48 5 0.889394 97 5 0.66320 67 5 0.93403 140 5 0.581250 77 5 0.473913 98 5 0.347222 70 5 1.00000 1 0 0.56944 21 2 0.94246 102 5 0.824561 81 4 0.916346 165 4 0.953284 158 5 0.714286 8 0 0.784519 152 5 0.98333 0.80814 1.00000 0.96609 0.937500 0.95164 0.875000 0.89286 0.91667 0.75000 0.88453 1.000000 0.875000 0.95000 0.937500 NA NA 0.969320 0.95833 0.98438 0.937500 1.000000 0.97222 1.00000 0.977767 0.883987 0.86161 1.00000 0.87847 0.882576 0.910606 0.98438 0.937500 0.510870 0.270833 NA 0.66667 0.913690 0.986842 0.937019 0.941605 1.000000 0.938684 0 0.89785 0.92420 -0.0029683 5 0.67576 0.68077 -0.0050056 0.7960129 0.60203716 insignificant 1 1.00000 insignificant 0.53778419 0.906053 insignificant 1.00000 1 insignificant -0.0232560 0.653011 lowCoverage 1 lowCoverage 0.89785 0.715447 0.2254991 5 0.67576 0.48828 0.187482 4.7365e-06 0.99783843 hypermethylated 1.3931e-04 1.00000 hypermethylated 1.3940e-04 0.99990759 hypermethylated 7.3369e-03 1.00000 hypermethylated 0.19224256 1.3485e-01 lowCoverage 1.0000e+00 lowCoverage 0.89785 0.937943 -0.0114347 5 0.67576 0.648204 0.0275605 7.3237e-01 4.7317e-01 insignificant 1.0000e+00 1.000000 insignificant 6.2147e-01 0.89266449 insignificant 1.0000e+00 1.00000 insignificant 0.0060249 9.1056e-01 lowCoverage 1.0000000 lowCoverage 0.92420 0.715447 0.2160140 5 0.68077 0.48828 0.192488 3.4862e-04 0.99995581 hypermethylated 8.9389e-03 1.00000 hypermethylated 2.9375e-03 0.999969 weaklyHypermeth 0.10129403 1 insignificant 0.2154986 1.0509e-01 lowCoverage 1.00000000 lowCoverage 0.92420 0.937943 -0.0097936 5 0.68077 0.648204 0.032566 8.7570e-01 0.59113207 insignificant 1.00000000 1.0000 insignificant 0.9071767 0.73284803 insignificant 1.00000 1.00000 insignificant 0.0292810 0.6383616 lowCoverage 1 lowCoverage 0.715447 0.937943 -0.2343787 5 0.48828 0.648204 -0.159922 0.9999892 4.9589e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.999919 1.1661e-02 weaklyHypometh 1 0.46642032 insignificant -0.1862176 0.1530137 lowCoverage 1.00000 lowCoverage chr1 116262148 116263148 8578 ENSG00000219640 0.76275 66 4 0.80455 100 5 0.55556 27 2 0.96464 86 4 0.92000 54 4 0.59938 76 5 0.819048 79 4 0.80913 55 5 0.49714 23 4 0.96364 19 1 0.77144 140 5 0.84500 33 4 0.86905 24 3 0.64583 28 2 0.711111 39 5 0.75000 4 0 NA 0 0 0.856261 54 5 0.79244 41 2 0.91476 54 5 0.92000 9 1 0.700000 21 3 0.74722 48 5 0.42273 25 2 1.000000 27 4 0.827381 117 5 0.74667 20 1 0.90000 17 0 0.91426 42 2 0.829437 135 5 0.77908 135 5 0.88333 82 4 0.775077 78 5 0.790972 46 4 0.603183 121 5 0.67857 11 1 0.73984 54 5 0.66955 69 5 0.741818 134 4 0.829189 124 5 0.760714 141 4 0.860000 13 1 0.768229 171 5 0.76275 0.80455 0.55556 0.96464 0.920000 0.75900 0.819048 0.89462 0.66440 0.96364 0.83431 0.845000 0.842857 0.77500 0.853333 0.840410 NA 0.884656 0.79244 0.91476 0.920000 0.700000 0.74722 0.42273 0.880151 0.923810 0.74667 0.90000 0.89712 0.829437 0.779082 0.88333 0.775077 0.865556 0.765093 0.816722 0.73984 0.871282 0.741818 0.829189 0.912857 0.860000 0.829167 0 0.84731 0.86726 -0.0181250 5 0.68825 0.80472 -0.1164785 0.9017992 0.07114111 insignificant 1 1.00000 insignificant 0.98205649 0.123359 insignificant 1.00000 1 insignificant -0.0241732 0.650396 lowCoverage 1 lowCoverage 0.84980 0.825858 0.0228902 5 0.69928 0.67145 0.027826 3.5536e-01 0.80980008 insignificant 1.0000e+00 1.00000 insignificant 4.8732e-01 0.92891004 insignificant 1.0000e+00 1.00000 insignificant 0.07213781 1.0579e-01 lowCoverage 1.0000e+00 lowCoverage 0.84731 0.914237 -0.0028009 4 0.68825 0.675593 0.0126531 3.4706e-01 7.6523e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.4797e-01 0.70447651 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0103206 7.8728e-01 lowCoverage 1.0000000 lowCoverage 0.86706 0.825858 0.0373188 5 0.78032 0.67145 0.108865 7.4769e-02 0.92244929 insignificant 1.0000e+00 1.00000 insignificant 9.8441e-02 0.993923 insignificant 1.00000000 1 insignificant 0.0963110 8.2637e-02 lowCoverage 1.00000000 lowCoverage 0.86726 0.914237 0.0239649 4 0.80472 0.675593 0.129132 8.6381e-01 0.99901474 lowCoverage 1.00000000 1.0000 lowCoverage 0.2298224 0.99996978 lowCoverage 1.00000 1.00000 lowCoverage 0.0138526 0.7791193 lowCoverage 1 lowCoverage 0.825858 0.915808 -0.0252489 4 0.67145 0.760042 -0.088592 0.8459827 2.6405e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.909170 4.7141e-01 lowCoverage 1 1.00000000 lowCoverage -0.0824584 0.0528686 lowCoverage 1.00000 lowCoverage chr1 116875465 116876465 8605 ENSG00000200547 0.94579 103 3 0.90292 123 5 0.96000 82 5 0.86277 68 3 0.81047 90 5 0.93854 181 5 0.939538 93 5 0.92532 135 5 0.79978 55 5 0.91393 61 5 0.94000 192 5 0.92349 38 4 0.94833 130 5 0.87179 31 3 0.910991 116 5 0.82431 61 5 0.577778 28 3 0.929110 80 3 0.93082 165 5 0.96353 192 5 0.95455 46 5 0.881667 39 3 0.94306 67 3 0.95714 46 3 0.890000 30 2 0.904841 205 5 0.90737 72 5 0.98182 37 3 0.91903 186 3 0.945324 186 5 0.91734 202 5 0.95369 220 5 0.891714 91 5 0.856190 88 4 0.800000 105 3 1.00000 8 0 0.90238 94 5 0.86789 207 5 0.896318 173 5 0.918038 117 5 0.982222 72 3 0.968816 88 3 0.891784 111 5 0.92212 0.89885 0.94740 0.91064 0.892763 0.91219 0.930153 0.90987 0.74743 0.90050 0.92389 0.938250 0.947511 0.86754 0.860719 0.813725 0.317460 0.923869 0.91888 0.94401 0.934475 0.835227 0.92591 0.93043 0.841234 0.927847 0.86480 0.97816 0.94225 0.953487 0.944548 0.94690 0.851271 0.929190 0.759740 1.000000 0.85297 0.868886 0.900772 0.901539 0.973954 0.956716 0.912254 3 0.90410 0.93039 -0.0280553 5 0.93216 0.94446 -0.0122991 0.8122363 0.34759547 insignificant 1 1.00000 insignificant 0.92807069 0.119109 insignificant 1.00000 1 insignificant -0.0386913 0.085653 lowCoverage 1 lowCoverage 0.90401 0.816189 0.0827468 5 0.91859 0.85571 0.062878 3.0992e-02 0.78533888 weaklyHypermeth 4.9988e-01 1.00000 insignificant 8.1300e-01 0.21148822 insignificant 1.0000e+00 1.00000 insignificant 0.00459748 8.9324e-01 lowCoverage 1.0000e+00 lowCoverage 0.90401 0.925134 -0.0238331 5 0.91859 0.924594 -0.0060069 5.5322e-01 4.4074e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8607e-01 0.09879401 insignificant 1.0000e+00 1.00000 insignificant -0.0404748 1.5810e-01 lowCoverage 1.0000000 lowCoverage 0.93034 0.816189 0.1134999 5 0.93335 0.85571 0.077637 2.6853e-02 0.85797968 weaklyHypermeth 4.3311e-01 1.00000 insignificant 5.3021e-01 0.719921 insignificant 1.00000000 1 insignificant 0.0432888 1.7798e-01 lowCoverage 1.00000000 lowCoverage 0.93034 0.925134 0.0042509 5 0.93335 0.924594 0.008752 4.9218e-01 0.81675094 insignificant 1.00000000 1.0000 insignificant 0.5845466 0.64563861 insignificant 1.00000 1.00000 insignificant -0.0017835 0.9340369 lowCoverage 1 lowCoverage 0.816189 0.925134 -0.1090744 5 0.85571 0.924594 -0.068885 0.9009282 2.2797e-01 insignificant 1 1.0000e+00 insignificant 0.836970 6.8316e-01 insignificant 1 1.00000000 insignificant -0.0450723 0.2050538 lowCoverage 1.00000 lowCoverage chr1 117058356 117059356 8619 ENSG00000219018 0.83787 269 6 0.70676 178 6 0.76326 225 6 0.91432 318 6 0.60831 109 6 0.60971 279 6 0.580537 149 6 0.82112 165 6 0.79430 288 6 0.70423 247 7 0.87252 267 6 0.73656 147 6 0.67992 233 6 0.88823 165 6 0.814048 214 6 0.80228 158 5 0.978592 329 5 0.836292 305 6 0.86446 145 6 0.69968 193 6 0.80009 52 5 0.903183 103 5 0.79908 171 6 0.75567 77 6 0.858709 129 6 0.791649 238 6 0.64872 119 6 0.65875 113 5 0.85408 164 6 0.814198 201 6 0.83533 126 6 0.77593 319 6 0.451696 182 6 0.523617 67 6 0.544207 177 6 0.72777 48 5 0.59455 166 6 0.49796 148 6 0.712816 340 6 0.912354 266 6 0.877985 312 5 0.718338 245 5 0.818041 322 6 0.88653 0.76592 0.84094 0.94920 0.858348 0.89345 0.844929 0.85819 0.89938 0.86937 0.88874 0.861867 0.873738 0.91378 0.900767 0.927552 0.953785 0.907495 0.91083 0.83824 0.789901 0.881971 0.87954 0.85472 0.904253 0.829893 0.73483 0.85144 0.89102 0.839548 0.877043 0.89438 0.669452 0.648879 0.773257 0.757406 0.65876 0.714245 0.903140 0.960383 0.929926 0.937700 0.951546 5 0.87018 0.82671 0.0304462 6 0.72792 0.72920 -0.0012742 0.0080937 0.17135758 weaklyHypermeth 1 1.00000 insignificant 0.08587811 0.259244 insignificant 1.00000 1 insignificant -0.0156328 0.635190 insignificant 1 insignificant 0.87134 0.658629 0.1911961 6 0.80106 0.47526 0.325800 1.9131e-21 1.00000000 weaklyHypermeth 3.8261e-19 1.00000 weaklyHypermeth 4.8931e-10 0.99999999 weaklyHypermeth 1.2233e-07 1.00000 weaklyHypermeth 0.21901663 1.0069e-03 weaklyHypermeth 6.2932e-02 weaklyHypermeth 0.87018 0.912458 -0.0413493 6 0.72792 0.749110 -0.0211867 9.1356e-01 2.5640e-03 weaklyHypometh 1.0000e+00 0.641006 insignificant 9.8949e-01 0.00050308 weaklyHypometh 1.0000e+00 0.25154 insignificant -0.0322570 5.1652e-01 insignificant 1.0000000 insignificant 0.82621 0.658629 0.1593051 6 0.70671 0.47526 0.231454 6.8641e-10 0.99999980 weaklyHypermeth 4.5760e-08 1.00000 weaklyHypermeth 9.7088e-07 1.000000 weaklyHypermeth 0.00019418 1 weaklyHypermeth 0.2346494 7.4474e-04 hypermethylated 0.04654602 hypermethylated 0.82671 0.912458 -0.0730574 6 0.72920 0.749110 -0.019913 9.9538e-01 0.00088415 weaklyHypometh 1.00000000 0.8697 insignificant 0.9979593 0.00013451 weaklyHypometh 1.00000 0.13451 insignificant -0.0166242 0.7299938 insignificant 1 insignificant 0.658629 0.912399 -0.2213735 6 0.47526 0.717749 -0.242492 1.0000000 1.0561e-09 hypomethylated 1 2.1122e-07 hypomethylated 1.000000 4.2374e-07 hypomethylated 1 0.00042374 hypomethylated -0.2512736 0.0016972 weaklyHypometh 0.13055 insignificant chr1 120486580 120487580 8865 ENSG00000207149 0.80189 61 5 0.87356 375 5 0.88536 137 5 0.93492 92 5 0.96349 101 5 0.95617 216 5 0.875860 157 5 0.90052 204 5 0.85991 121 5 0.89697 58 5 0.87099 272 5 0.84154 62 5 0.96143 94 5 0.86364 59 5 0.895977 127 5 0.97500 75 5 1.000000 8 1 0.817982 80 5 0.98333 31 3 0.92583 220 5 0.73718 55 5 0.892929 55 5 0.94264 104 5 0.90123 135 5 0.960000 20 3 0.930503 319 5 0.83579 111 5 0.92063 46 5 0.96842 93 5 0.971337 406 5 0.79568 379 5 0.93190 232 5 0.772222 222 5 0.642424 59 5 0.717301 198 5 NA 0 0 0.53119 263 5 0.77163 263 5 0.980909 86 5 0.973197 87 5 0.945714 62 4 1.000000 21 4 0.963636 52 5 0.80308 0.85116 0.88677 0.92079 0.964751 0.95689 0.873007 0.90026 0.85733 0.89822 0.87362 0.834271 0.960788 0.86489 0.900139 0.970690 NA 0.819812 0.98391 0.92308 0.889973 0.894897 0.93386 0.95019 0.953103 0.914684 0.82771 0.91845 0.96987 0.964551 0.955580 0.93182 0.771508 0.648433 0.706819 NA 0.63207 0.762421 0.980031 0.969328 0.939310 1.000000 0.964890 5 0.89412 0.93402 -0.0418835 5 0.91219 0.88020 0.0319911 0.9550241 0.00054028 weaklyHypometh 1 0.27014 insignificant 0.83897127 0.037240 weaklyHypometh 1.00000 1 insignificant 0.0051970 0.835081 lowCoverage 1 lowCoverage 0.89412 0.718408 0.1931347 5 0.91219 0.59522 0.316976 3.9900e-15 0.98070952 weaklyHypermeth 4.9875e-13 1.00000 weaklyHypermeth 1.0799e-05 0.98196435 weaklyHypermeth 1.0799e-03 1.00000 weaklyHypermeth 0.21726411 7.1197e-03 lowCoverage 2.7383e-01 lowCoverage 0.89412 0.964286 -0.0676093 5 0.91219 0.967730 -0.0555377 1.0000e+00 3.7632e-04 weaklyHypometh 1.0000e+00 0.125439 insignificant 1.0000e+00 0.00026201 weaklyHypometh 1.0000e+00 0.25154 insignificant -0.0684728 2.7977e-04 lowCoverage 0.0699431 lowCoverage 0.93402 0.718408 0.2165388 5 0.88020 0.59522 0.284985 5.1340e-14 0.99990345 hypermethylated 8.5567e-12 1.00000 hypermethylated 9.3936e-06 0.999994 hypermethylated 0.00117420 1 hypermethylated 0.2120671 5.9906e-03 lowCoverage 0.24960757 lowCoverage 0.93402 0.964286 -0.0317845 5 0.88020 0.967730 -0.087529 9.7911e-01 0.06645092 insignificant 1.00000000 1.0000 insignificant 0.9999563 0.00938661 weaklyHypometh 1.00000 1.00000 insignificant -0.0736699 0.0063450 lowCoverage 1 lowCoverage 0.718408 0.964286 -0.2169295 5 0.59522 0.967730 -0.372514 1.0000000 4.5961e-08 hypomethylated 1 5.7451e-06 hypomethylated 1.000000 5.1985e-06 hypomethylated 1 0.00133042 hypomethylated -0.2857370 0.0027692 lowCoverage 0.19780 lowCoverage chr1 142627520 142628520 8943 SRGAP2P2 ENSG00000196369 0.72866 133 5 0.49753 125 6 0.47754 142 6 0.63135 56 5 0.50357 88 6 0.55656 155 6 0.617594 130 6 0.47987 117 6 0.55252 132 6 0.62377 125 6 0.67136 178 6 0.42131 109 4 0.40112 131 6 NA 0 0 0.427787 133 6 0.57261 60 4 0.343783 98 5 0.580556 78 5 0.47507 94 6 0.68672 132 6 0.58267 67 6 0.366162 52 2 0.59420 117 6 0.59537 50 6 0.746032 17 2 0.572852 171 6 0.54776 86 6 0.70833 41 4 0.43471 86 6 0.599607 187 6 0.53906 204 6 0.62012 234 6 0.471536 217 6 0.468429 107 6 0.557463 185 6 0.63889 26 2 0.60795 56 4 0.62280 164 6 0.468053 118 6 0.523515 116 5 0.513889 59 3 0.354458 94 5 0.483651 90 6 0.72316 0.54465 0.43786 0.60177 0.566460 0.67510 0.676043 0.52893 0.59022 0.67869 0.69776 0.467993 0.405946 NA 0.493497 0.554920 0.388164 0.617633 0.48371 0.71908 0.626955 0.358366 0.62700 0.52939 0.617140 0.574464 0.59445 0.76932 0.42465 0.627239 0.567948 0.65528 0.427976 0.432567 0.551728 0.526570 0.57675 0.620841 0.445563 0.514907 0.515700 0.364030 0.508088 2 0.47675 0.53049 -0.0203211 6 0.54738 0.56548 -0.0181013 0.7870690 0.26878227 insignificant 1 1.00000 insignificant 0.91224392 0.282079 insignificant 1.00000 1 insignificant -0.0361370 0.353270 insignificant 1 insignificant 0.47675 0.450331 0.0530372 6 0.54738 0.53589 0.011491 1.9646e-03 0.00029838 weaklyHypermeth 3.8163e-02 0.14919 weaklyHypermeth 1.3932e-01 0.00071427 inconclusive 1.0000e+00 0.23809 insignificant -0.02174196 5.8944e-01 insignificant 1.0000e+00 insignificant 0.47675 0.454927 0.1060355 6 0.54738 0.461139 0.0862387 1.0709e-03 7.6336e-01 weaklyHypermeth 6.6929e-02 1.000000 weaklyHypermeth 3.4371e-03 0.53311016 weaklyHypermeth 2.2914e-01 1.00000 insignificant 0.0707227 9.8021e-02 insignificant 1.0000000 insignificant 0.53049 0.450331 0.0852248 6 0.56548 0.53589 0.029593 2.6543e-03 0.00015824 weaklyHypermeth 5.4170e-02 0.07912 weaklyHypermeth 2.4784e-01 0.030180 inconclusive 1.00000000 1 insignificant 0.0143950 7.4198e-01 insignificant 1.00000000 insignificant 0.53049 0.454927 0.1169071 6 0.56548 0.461139 0.104340 1.8482e-04 0.80221071 weaklyHypermeth 0.01204684 1.0000 weaklyHypermeth 0.0077801 0.96735739 weaklyHypermeth 0.50493 1.00000 insignificant 0.1068597 0.0275024 weaklyHypermeth 1 insignificant 0.450331 0.454927 0.0404184 6 0.53589 0.461139 0.074747 0.0011180 5.1886e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.018378 7.7864e-01 weaklyHypermeth 1 1.00000000 insignificant 0.0924647 0.0615529 insignificant 1.00000 insignificant chr1 143877982 143878982 9026 ENSG00000201789 0.86679 630 9 0.67002 349 9 0.78135 229 9 0.91548 309 9 0.818943 112 9 0.84004 816 9 0.85111 243 9 0.88460 212 9 0.81794 172 9 0.85786 199 9 0.84114 458 9 0.42212 125 6 0.76250 294 9 0.564815 41 4 0.679139 280 9 0.933904 177 9 0.836221 103 5 0.76508 517 9 0.92453 408 9 0.87818 523 9 0.89536 167 9 0.83901 182 9 0.74482 341 9 0.737173 95 6 0.86436 306 9 0.86085 344 9 0.707194 194 9 0.86107 124 6 0.88513 282 9 0.878236 419 9 0.89840 424 9 0.89195 705 9 0.73199 226 9 0.70835 350 9 0.67863 334 6 0.86409 164 8 0.60095 192 9 0.70366 429 9 0.81376 567 9 0.89925 526 9 0.783503 511 9 0.73196 734 9 0.713570 424 9 0.86608 0.70900 0.76946 0.88545 0.82221 0.81982 0.82168 0.83717 0.792734 0.88076 0.82805 0.69558 0.863848 0.83794 0.90777 0.900579 0.826922 0.83314 0.917242 0.83974 0.85968 0.850564 0.90720 0.80448 0.84479 0.86217 0.78089 0.81239 0.86938 0.84985 0.866877 0.88480 0.734463 0.711074 0.71641 0.85039 0.71179 0.706677 0.87786 0.89328 0.899975 0.83325 0.90655 9 0.84326 0.87190 -0.02363043 9 0.75176 0.69819 0.0535731 9.5979e-01 6.0942e-02 insignificant 1.0000e+00 1.000000 insignificant 9.5937e-01 0.22668086 insignificant 1.0000000 1.000000 insignificant -0.0430419 0.223698 insignificant 1 insignificant 0.84415 0.69758 0.149500 9 0.76579 0.62331 0.1424876 6.2972e-12 9.9983e-01 weaklyHypermeth 3.2323e-10 1.0000e+00 weaklyHypermeth 2.6668e-04 9.9674e-01 weaklyHypermeth 8.3337e-03 1.0000e+00 weaklyHypermeth 0.080977 9.7878e-02 insignificant 1.0000000 insignificant 0.84384 0.85440 -0.0139573 9 0.80746 0.73581 0.071653 2.0852e-01 8.0907e-02 insignificant 1.0000e+00 1.0000000 insignificant 4.9918e-01 0.17857620 insignificant 1.0000e+00 1.00000 insignificant 0.0071811 8.7207e-01 insignificant 1.0000000 insignificant 0.87301 0.69840 0.168145 9 0.79098 0.74797 0.043007 1.2195e-15 1.0000e+00 weaklyHypermeth 1.6283e-13 1.0000e+00 weaklyHypermeth 7.4147e-07 9.9768e-01 weaklyHypermeth 1.0592e-04 1.0000e+00 weaklyHypermeth 0.124019 1.4550e-02 weaklyHypermeth 0.3932364 insignificant 0.87255 0.85497 0.0152383 9 0.74937 0.77240 -0.0230259 2.8028e-02 0.392808 weaklyHypermeth 8.4935e-01 1 insignificant 3.7004e-01 0.247661 insignificant 1.0000e+00 1 insignificant 0.0502230 0.23219078 insignificant 1.000000 insignificant 0.69776 0.85471 -0.1435505 9 0.66497 0.77748 -0.1125015 9.9914e-01 2.0993e-06 weaklyHypometh 1.0000e+00 1.4995e-04 weaklyHypometh 9.9852e-01 5.8630e-04 weaklyHypometh 1.0000e+00 5.5662e-02 weaklyHypometh -0.0737956 1.6001e-01 insignificant 1.0000000 insignificant chr1 149031840 149032840 9254 ENSG00000218169 0.77484 162 8 0.81416 226 9 0.61624 91 8 0.88031 149 8 0.824074 47 5 0.85453 239 8 0.35957 47 4 0.81056 155 8 0.72254 65 7 0.73757 89 7 0.85222 281 9 0.60556 32 3 0.85323 138 8 0.730903 45 4 0.811849 75 8 0.537500 25 2 0.628571 65 4 0.84074 93 7 0.82287 142 8 0.86897 210 8 0.77236 82 6 0.84647 51 7 0.78180 77 5 0.858417 83 7 0.83791 95 7 0.89295 225 9 0.890813 112 7 0.67857 25 1 0.92694 132 9 0.740781 266 8 0.86649 196 8 0.85569 235 9 0.81863 159 9 0.77161 96 8 0.79975 160 8 0.79167 9 0 0.88822 47 4 0.81688 224 9 0.84085 89 8 0.92960 128 8 0.894336 86 8 0.74632 66 7 0.914825 105 7 0.81860 0.81270 0.64247 0.87528 0.82802 0.85552 0.39260 0.82911 0.725554 0.83624 0.83442 0.60948 0.837520 0.69328 0.80893 0.593103 0.682579 0.83901 0.817271 0.83891 0.77692 0.868149 0.75897 0.84763 0.85315 0.86063 0.87079 0.75400 0.91742 0.81725 0.841269 0.83876 0.789855 0.754576 0.79676 0.82373 0.84687 0.798593 0.83832 0.92087 0.894692 0.80567 0.90377 1 0.81524 0.85307 -0.02494997 8 0.82740 0.75911 0.0682872 9.9185e-01 7.9953e-02 insignificant 1.0000e+00 1.000000 insignificant 9.9634e-01 0.00279201 weaklyHypometh 1.0000000 0.465334 insignificant -0.0817594 0.033313 weaklyHypometh 1 insignificant 0.81492 0.81583 0.013838 8 0.80822 0.81207 -0.0038483 8.2180e-02 4.6298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4157e-01 8.1013e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.067117 6.2501e-02 insignificant 1.0000000 insignificant 0.81492 0.86287 -0.0682789 8 0.80822 0.87596 -0.067746 9.9986e-01 1.2708e-02 weaklyHypometh 1.0000e+00 0.9775667 insignificant 1.0000e+00 0.00109043 weaklyHypometh 1.0000e+00 0.27261 insignificant -0.1178469 2.2840e-02 weaklyHypometh 0.8864612 insignificant 0.85361 0.81583 0.037769 8 0.84345 0.81207 0.031388 9.2898e-03 9.7216e-01 weaklyHypermeth 1.4292e-01 1.0000e+00 insignificant 5.6966e-02 9.7507e-01 insignificant 7.8288e-01 1.0000e+00 insignificant 0.014642 5.8714e-01 insignificant 1.0000000 insignificant 0.85361 0.86287 -0.0425016 8 0.84345 0.87596 -0.0325097 9.8173e-01 0.104079 insignificant 1.0000e+00 1 insignificant 9.5744e-01 0.221323 insignificant 1.0000e+00 1 insignificant -0.0360875 0.38698846 insignificant 1.000000 insignificant 0.81583 0.86287 -0.0810829 8 0.81207 0.87596 -0.0638979 9.9516e-01 2.8792e-03 weaklyHypometh 1.0000e+00 7.7817e-02 weaklyHypometh 9.9434e-01 4.7318e-02 weaklyHypometh 1.0000e+00 9.4635e-01 insignificant -0.0507298 2.2147e-01 insignificant 1.0000000 insignificant chr1 149372612 149373612 9266 ENSG00000216764 0.35328 332 9 0.30849 187 9 0.59087 129 9 0.28018 321 8 0.603391 58 7 0.32964 310 9 0.49270 117 9 0.40845 157 9 0.27874 172 9 0.32483 131 9 0.35636 233 9 0.22333 165 9 0.81873 170 9 NA 0 0 0.689043 134 8 0.174398 123 8 0.245084 124 8 0.42468 334 9 0.51031 140 9 0.43133 157 9 0.37650 66 7 0.26248 165 7 0.30279 198 9 0.337963 78 9 0.44084 91 7 0.78092 197 9 0.516557 142 9 0.33254 58 5 0.49503 130 9 0.831433 159 9 0.33176 227 9 0.26238 314 9 0.89848 89 8 0.89083 149 9 0.96667 39 5 0.81152 83 7 0.60370 66 6 0.85060 173 9 0.52012 291 9 0.50148 306 9 0.581011 245 7 0.56297 260 8 0.476056 362 9 0.28894 0.25284 0.56678 0.20216 0.57853 0.25872 0.46343 0.36173 0.217357 0.25840 0.29688 0.16314 0.800173 NA 0.66846 0.193596 0.179889 0.37825 0.463760 0.40334 0.32867 0.247709 0.24331 0.26655 0.40912 0.77097 0.48645 0.26174 0.45884 0.82935 0.269962 0.19977 0.913788 0.919411 0.95120 0.82551 0.59891 0.867757 0.47982 0.45439 0.574878 0.52293 0.42594 4 0.34688 0.40384 -0.03961090 9 0.38737 0.42925 -0.0418781 9.6726e-01 2.1515e-01 insignificant 1.0000e+00 1.000000 insignificant 8.4973e-01 0.50881125 insignificant 1.0000000 1.000000 insignificant -0.0264334 0.698012 insignificant 1 insignificant 0.34688 0.83139 -0.424341 9 0.38737 0.85890 -0.4715338 4.2152e-01 3.4805e-37 hypomethylated 1.0000e+00 3.4805e-34 hypomethylated 9.6489e-01 1.7322e-13 hypomethylated 1.0000e+00 1.7322e-10 hypomethylated -0.424134 3.3408e-05 hypomethylated 0.0031790 hypomethylated 0.34688 0.44536 -0.1464940 9 0.38737 0.52618 -0.138809 9.9999e-01 2.4644e-05 weaklyHypometh 1.0000e+00 0.0082147 weaklyHypometh 1.0000e+00 0.00016721 weaklyHypometh 1.0000e+00 0.16721 insignificant -0.1154950 1.4164e-02 weaklyHypometh 0.6744726 insignificant 0.40384 0.83139 -0.390418 9 0.42925 0.85890 -0.429656 8.3222e-01 1.4359e-18 hypomethylated 1.0000e+00 1.4359e-15 hypomethylated 9.6218e-01 1.2733e-10 hypomethylated 1.0000e+00 1.2733e-07 hypomethylated -0.397700 1.0219e-04 hypomethylated 0.0082815 hypomethylated 0.40384 0.44536 -0.1019767 9 0.42925 0.52618 -0.0969311 9.9792e-01 0.026813 weaklyHypometh 1.0000e+00 1 insignificant 9.9874e-01 0.019353 weaklyHypometh 1.0000e+00 1 insignificant -0.0890616 0.14943537 insignificant 1.000000 insignificant 0.83139 0.44536 0.3489545 9 0.85890 0.52618 0.3327246 1.0318e-18 7.2854e-01 hypermethylated 1.0318e-15 1.0000e+00 hypermethylated 6.5669e-08 9.0924e-01 hypermethylated 6.5669e-05 1.0000e+00 hypermethylated 0.3086389 1.0922e-03 weaklyHypermeth 0.0992878 weaklyHypermeth chr1 151972745 151973745 9301 INTS3 ENSG00000143624 0.59027 146 5 0.65586 94 5 0.67267 123 5 0.67039 92 5 0.579913 47 5 0.62526 221 5 0.65039 128 5 0.68476 59 5 0.53715 68 5 0.63292 79 5 0.63170 121 5 0.57835 69 5 0.65292 82 5 NA 0 0 0.692613 77 5 0.771811 58 5 0.652684 64 5 0.67360 94 5 0.67045 155 5 0.59818 166 5 0.68485 41 4 0.64359 68 5 0.66366 120 5 0.691775 48 4 0.63333 32 5 0.54880 188 5 0.802393 48 4 0.70000 29 3 0.60476 88 5 0.660634 153 5 0.66182 136 5 0.65329 312 5 0.58143 97 5 0.52630 97 5 0.57716 83 5 0.66923 54 5 0.60379 54 5 0.54247 144 5 0.67331 113 5 0.65796 156 5 0.640936 92 5 0.64032 133 5 0.667819 115 5 0.61775 0.69125 0.70136 0.69511 0.62524 0.66594 0.68062 0.71653 0.551721 0.67414 0.65691 0.60767 0.693581 NA 0.69861 0.803128 0.674638 0.70680 0.693263 0.62493 0.72030 0.657206 0.70476 0.69330 0.69786 0.58423 0.80744 0.72059 0.64905 0.69546 0.677243 0.68330 0.599667 0.536385 0.59673 0.68625 0.65068 0.561574 0.70186 0.67370 0.663117 0.66191 0.70115 4 0.64231 0.65083 0.00233290 5 0.64171 0.63818 0.0035368 5.2779e-01 1.9535e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3812e-01 0.17322668 insignificant 1.0000000 1.000000 insignificant -0.0191505 0.374856 lowCoverage 1 lowCoverage 0.64231 0.58223 0.068736 5 0.64171 0.57442 0.0672977 2.3730e-05 9.6340e-01 weaklyHypermeth 5.2734e-04 1.0000e+00 weaklyHypermeth 6.0941e-03 8.4761e-01 weaklyHypermeth 1.2696e-01 1.0000e+00 insignificant 0.059863 3.4266e-02 lowCoverage 0.6992981 lowCoverage 0.64231 0.66338 -0.0167288 5 0.64171 0.65748 -0.015763 8.0215e-01 4.0207e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6130e-01 0.39935600 insignificant 1.0000e+00 1.00000 insignificant -0.0128126 3.6260e-01 lowCoverage 1.0000000 lowCoverage 0.65083 0.58223 0.066090 5 0.63818 0.57442 0.063761 1.6765e-05 8.3550e-01 weaklyHypermeth 4.1914e-04 1.0000e+00 weaklyHypermeth 2.1611e-03 9.8275e-01 weaklyHypermeth 5.5414e-02 1.0000e+00 weaklyHypermeth 0.079014 1.2722e-02 lowCoverage 0.3533821 lowCoverage 0.65083 0.66338 -0.0150885 5 0.63818 0.65748 -0.0193000 3.9464e-01 0.353771 insignificant 1.0000e+00 1 insignificant 2.8026e-01 0.832653 insignificant 1.0000e+00 1 insignificant 0.0063379 0.73919801 lowCoverage 1.000000 lowCoverage 0.58223 0.66338 -0.0809773 5 0.57442 0.65748 -0.0830610 9.9826e-01 2.5584e-03 weaklyHypometh 1.0000e+00 7.3097e-02 weaklyHypometh 9.7945e-01 4.3472e-02 weaklyHypometh 1.0000e+00 9.0568e-01 insignificant -0.0726761 1.5275e-02 weaklyHypometh 0.4927532 insignificant chr1 153244323 153245323 9330 ZBTB7B ENSG00000160685 0.90131 152 6 0.91236 58 6 0.81296 102 6 0.87949 264 6 0.845899 42 4 0.90706 201 6 0.96730 92 6 0.93950 93 6 0.85078 90 6 0.91553 73 6 0.87968 118 6 0.81902 56 6 0.88125 66 6 NA 0 0 0.847028 55 4 0.754849 76 6 0.662495 69 6 0.88206 254 6 0.81243 50 6 0.85398 180 6 0.87731 37 4 0.89520 125 6 0.86230 210 6 0.651587 29 3 0.95468 89 6 0.82049 89 6 0.753626 104 6 0.67083 47 6 0.95581 52 6 0.901190 80 6 0.96371 93 6 0.87256 257 6 0.25769 105 6 0.06334 64 6 0.25000 10 0 0.39097 82 6 0.12060 70 6 0.35635 132 6 0.87723 173 6 0.93323 306 6 0.928465 214 6 0.92720 266 6 0.731209 221 6 0.91291 0.92466 0.84963 0.89790 0.79341 0.90207 0.96251 0.95877 0.818714 0.90734 0.85161 0.82801 0.866392 NA 0.89112 0.757359 0.686115 0.89597 0.814643 0.85964 0.83715 0.884822 0.85926 0.61983 0.95682 0.79474 0.73800 0.61676 0.93989 0.91491 0.969538 0.87614 0.288504 0.066870 0.41972 0.45227 0.14270 0.408736 0.90596 0.93360 0.929322 0.92185 0.78187 4 0.87661 0.85809 0.01772107 6 0.87245 0.86171 0.0107429 1.3714e-01 7.9669e-01 insignificant 1.0000e+00 1.000000 insignificant 2.6829e-01 0.80631218 insignificant 1.0000000 1.000000 insignificant 0.0109356 0.754230 insignificant 1 insignificant 0.87661 0.23110 0.624310 6 0.87245 0.25650 0.6159507 2.5503e-47 1.0000e+00 hypermethylated 1.2752e-44 1.0000e+00 hypermethylated 2.9973e-14 1.0000e+00 hypermethylated 9.9910e-12 1.0000e+00 hypermethylated 0.619384 3.0220e-05 hypermethylated 0.0031790 hypermethylated 0.87661 0.91102 -0.0188423 6 0.87245 0.88557 -0.013120 9.2842e-01 2.5136e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.2563e-01 0.23076044 insignificant 1.0000e+00 1.00000 insignificant -0.0202567 6.4516e-01 insignificant 1.0000000 insignificant 0.85809 0.23110 0.615984 6 0.86171 0.25650 0.605208 8.7449e-40 1.0000e+00 hypermethylated 8.7449e-37 1.0000e+00 hypermethylated 8.7381e-12 1.0000e+00 hypermethylated 4.3690e-09 1.0000e+00 hypermethylated 0.608449 5.1834e-06 hypermethylated 0.0014996 hypermethylated 0.85809 0.91102 -0.0353392 6 0.86171 0.88557 -0.0238625 7.5593e-01 0.097302 insignificant 1.0000e+00 1 insignificant 8.5611e-01 0.185883 insignificant 1.0000e+00 1 insignificant -0.0311923 0.54033232 insignificant 1.000000 insignificant 0.23110 0.91102 -0.6393183 6 0.25650 0.88557 -0.6290703 1.0000e+00 4.8701e-20 hypomethylated 1.0000e+00 4.8701e-17 hypomethylated 1.0000e+00 6.0072e-09 hypomethylated 1.0000e+00 6.0072e-06 hypomethylated -0.6396409 5.2628e-06 hypomethylated 0.0052628 hypomethylated chr1 153247920 153248920 9338 ZBTB7B ENSG00000160685 0.75562 148 5 0.84411 120 5 0.91113 84 5 0.60037 170 5 0.646412 66 5 0.69454 223 5 0.90378 88 5 0.74082 128 5 0.79637 138 5 0.72706 124 5 0.88475 146 5 0.65321 57 4 0.89659 175 5 0.825897 97 5 0.856375 112 5 0.668309 50 3 0.782609 27 1 0.71161 176 5 0.90998 126 4 0.80974 151 5 0.61205 81 5 0.66291 61 4 0.57328 95 5 0.606113 80 5 0.71032 38 4 0.75373 155 5 0.609744 81 4 0.73925 69 5 0.90897 193 5 0.905777 148 5 0.73427 167 5 0.88137 195 5 0.78202 136 5 0.82172 108 5 0.56533 159 2 0.93778 23 2 0.58334 103 4 0.69237 239 5 0.85152 173 5 0.73653 145 5 0.883488 143 5 0.83007 224 5 0.740663 146 5 0.87426 0.77627 0.87742 0.82832 0.59245 0.77408 0.88363 0.85617 0.789239 0.86004 0.84479 0.79755 0.893057 0.80504 0.86509 0.559260 0.751052 0.84814 0.878160 0.76934 0.72482 0.682419 0.79250 0.77715 0.90209 0.86646 0.61345 0.76419 0.85954 0.92187 0.866559 0.85157 0.793322 0.841716 0.64498 0.93043 0.70888 0.676029 0.80112 0.71178 0.858167 0.81294 0.74380 3 0.82294 0.83272 -0.00623467 5 0.63541 0.65943 -0.0240187 7.8225e-01 2.7475e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3285e-01 0.58639935 insignificant 1.0000000 1.000000 insignificant 0.0561499 0.187145 lowCoverage 1 lowCoverage 0.82431 0.76432 0.094561 5 0.72618 0.58216 0.1440270 2.0560e-03 9.9659e-01 weaklyHypermeth 3.4267e-02 1.0000e+00 weaklyHypermeth 3.6814e-01 8.7976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.050536 4.5045e-01 lowCoverage 1.0000000 lowCoverage 0.82601 0.80626 0.0199098 5 0.83094 0.81350 0.017443 1.5013e-01 7.9166e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.2736e-02 0.88098851 insignificant 1.0000e+00 1.00000 insignificant -0.0274890 4.7621e-01 lowCoverage 1.0000000 lowCoverage 0.83876 0.76432 0.098765 5 0.74065 0.58216 0.158490 3.3934e-03 9.6686e-01 weaklyHypermeth 6.0597e-02 1.0000e+00 weaklyHypermeth 2.1149e-01 6.0705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.005614 9.3651e-01 lowCoverage 1.0000000 lowCoverage 0.84254 0.80626 0.0275990 5 0.84833 0.81350 0.0348338 1.8372e-01 0.953732 insignificant 1.0000e+00 1 insignificant 1.3498e-01 0.985404 insignificant 1.0000e+00 1 insignificant -0.0836390 0.09000342 lowCoverage 1.000000 lowCoverage 0.76601 0.80626 -0.0728193 5 0.71502 0.81350 -0.0984807 9.5493e-01 8.2974e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7987e-01 6.5427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0780250 2.7468e-01 lowCoverage 1.0000000 lowCoverage chr1 153308588 153309588 9347 ENSG00000143620 0.14568 139 6 0.11338 271 10 0.11003 244 10 0.13683 94 9 0.070111 188 11 0.16623 200 10 0.25693 279 10 0.10021 263 10 0.23935 305 11 0.16778 277 11 0.13433 326 11 0.09542 210 12 0.12268 280 11 0.069388 34 5 0.074512 345 11 0.042759 305 11 0.035266 198 8 0.34765 105 10 0.15054 206 10 0.07948 252 9 0.27359 197 8 0.06250 64 6 0.26625 198 10 0.097854 158 9 0.24167 54 5 0.31090 265 10 0.098482 178 8 0.18833 161 14 0.08008 142 7 0.098984 309 10 0.19121 324 10 0.13020 375 10 0.21984 180 10 0.28333 173 10 0.52420 142 7 0.41905 49 6 0.25989 110 10 0.29395 244 10 0.13996 164 11 0.11130 239 7 0.028409 70 6 0.12476 118 6 0.061101 118 6 0.12047 0.06526 0.15061 0.10201 0.13046 0.19178 0.26107 0.13201 0.076707 0.18492 0.22865 0.14394 0.070094 0.13969 0.12602 0.083782 0.049342 0.25119 0.072689 0.12101 0.23234 0.038658 0.21410 0.17377 0.21930 0.31468 0.14072 0.15189 0.15049 0.14196 0.012696 0.16864 0.064724 0.093626 0.13247 0.20723 0.14641 0.150226 0.13462 0.10129 0.054094 0.15246 0.09601 6 0.12077 0.15423 -0.02701101 10 0.16807 0.19237 -0.0243003 7.6740e-01 4.7998e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.1085e-01 0.34861622 insignificant 1.0000000 1.000000 insignificant -0.0370765 0.234131 insignificant 1 insignificant 0.12077 0.22049 -0.107638 10 0.16807 0.28724 -0.1191775 9.9560e-03 6.7008e-26 weaklyHypometh 1.5085e-01 3.3504e-23 weaklyHypometh 8.5478e-03 2.6506e-07 weaklyHypometh 1.7444e-01 1.3253e-04 weaklyHypometh -0.200448 6.1755e-03 weaklyHypometh 0.1583449 insignificant 0.12015 0.12976 0.0037157 6 0.15150 0.12476 0.026738 2.6722e-01 3.9965e-02 inconclusive 1.0000e+00 1.0000000 insignificant 2.8034e-02 0.94111499 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0398217 1.7052e-01 insignificant 1.0000000 insignificant 0.15423 0.22049 -0.076059 10 0.19237 0.28724 -0.094877 2.6791e-02 4.7827e-13 weaklyHypometh 3.6205e-01 2.3913e-10 weaklyHypometh 1.4603e-02 7.7188e-05 weaklyHypometh 2.7793e-01 2.5729e-02 weaklyHypometh -0.163372 1.5423e-02 weaklyHypometh 0.4058574 insignificant 0.15321 0.12976 0.0356716 6 0.17753 0.12476 0.0527739 2.0509e-01 0.932506 insignificant 1.0000e+00 1 insignificant 3.7216e-02 0.999203 weaklyHypermeth 1.0000e+00 1 insignificant 0.0768982 0.03381237 weaklyHypermeth 1.000000 insignificant 0.22011 0.12976 0.0475877 6 0.28395 0.12476 0.1591900 7.4296e-06 1.7678e-02 weaklyHypermeth 3.7148e-03 3.1212e-01 weaklyHypermeth 9.9101e-04 2.3887e-01 weaklyHypermeth 3.3034e-01 1.0000e+00 insignificant 0.2402699 2.4124e-03 weaklyHypermeth 0.1708444 insignificant chr1 153468714 153469714 9355 ENSG00000217829 0.83136 182 5 0.89298 362 6 0.90897 161 6 0.92749 188 5 0.803639 145 6 0.93097 424 6 0.92325 216 6 0.95223 164 6 0.98858 136 5 0.92723 99 5 0.90791 341 6 0.86598 68 5 0.95443 107 6 0.935730 67 5 0.884493 159 5 0.934921 67 5 0.916667 21 2 0.91479 252 5 0.93542 299 6 0.94697 300 6 0.94140 100 5 0.85556 26 2 0.93280 193 6 0.780180 150 6 0.91368 30 3 0.91092 323 6 0.901966 140 5 0.95842 99 6 0.79104 243 6 0.909788 336 6 0.88438 436 6 0.93044 348 6 0.77001 247 6 0.60813 185 6 0.74686 307 5 0.57143 18 2 0.77627 191 6 0.83676 325 6 0.85800 301 5 0.90538 316 5 0.950638 150 4 0.93303 125 3 0.954256 171 5 0.92338 0.87180 0.87484 0.91822 0.87263 0.91757 0.90442 0.92047 0.967591 0.94969 0.89833 0.88771 0.967429 0.93864 0.87066 0.900092 0.924368 0.94963 0.940296 0.95995 0.88950 0.792394 0.92427 0.86852 0.87925 0.94044 0.90519 0.94753 0.91198 0.92063 0.915440 0.93549 0.713097 0.688941 0.91561 0.47834 0.76305 0.902334 0.93656 0.92619 0.968294 0.90641 0.94590 4 0.91911 0.92111 -0.00088314 6 0.81279 0.81166 0.0011334 1.3123e-01 5.7964e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1755e-02 0.89446095 insignificant 1.0000000 1.000000 insignificant 0.0216525 0.267348 insignificant 1 insignificant 0.91933 0.77769 0.158736 6 0.91705 0.77032 0.1467396 7.4356e-11 8.9509e-01 weaklyHypermeth 2.9742e-09 1.0000e+00 weaklyHypermeth 3.4172e-06 9.7645e-01 weaklyHypermeth 2.6826e-04 1.0000e+00 weaklyHypermeth 0.195957 5.1479e-03 weaklyHypermeth 0.1391331 insignificant 0.91933 0.92568 -0.0026650 5 0.91705 0.89901 0.018043 9.1828e-02 3.6073e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.2948e-01 0.65179215 insignificant 1.0000e+00 1.00000 insignificant -0.0060610 7.7344e-01 lowCoverage 1.0000000 lowCoverage 0.92180 0.77769 0.151392 6 0.91554 0.77032 0.145228 9.1979e-08 4.3775e-01 weaklyHypermeth 2.9671e-06 1.0000e+00 weaklyHypermeth 2.2958e-04 5.9377e-01 weaklyHypermeth 8.5029e-03 1.0000e+00 weaklyHypermeth 0.174304 7.5404e-03 weaklyHypermeth 0.2356385 insignificant 0.92180 0.92568 -0.0028491 5 0.91554 0.89901 0.0165317 1.9563e-01 0.271847 insignificant 1.0000e+00 1 insignificant 6.6645e-01 0.135943 insignificant 1.0000e+00 1 insignificant -0.0277135 0.27642736 lowCoverage 1.000000 lowCoverage 0.77769 0.92568 -0.1465921 5 0.77032 0.89901 -0.1286967 9.2210e-01 3.6941e-03 weaklyHypometh 1.0000e+00 9.3526e-02 weaklyHypometh 9.9882e-01 7.1151e-03 weaklyHypometh 1.0000e+00 2.3191e-01 insignificant -0.2020178 3.7086e-03 lowCoverage 0.2139643 lowCoverage chr1 153468994 153469994 9356 ENSG00000217829 0.83136 182 5 0.89298 362 6 0.90897 161 6 0.92749 188 5 0.803639 145 6 0.93097 424 6 0.92325 216 6 0.95223 164 6 0.98858 136 5 0.92723 99 5 0.90791 341 6 0.86598 68 5 0.95443 107 6 0.935730 67 5 0.884493 159 5 0.934921 67 5 0.916667 21 2 0.91479 252 5 0.93542 299 6 0.94697 300 6 0.94140 100 5 0.85556 26 2 0.93280 193 6 0.780180 150 6 0.91368 30 3 0.91092 323 6 0.901966 140 5 0.95842 99 6 0.79104 243 6 0.909788 336 6 0.88438 436 6 0.93044 348 6 0.77001 247 6 0.60813 185 6 0.74686 307 5 0.57143 18 2 0.77627 191 6 0.83676 325 6 0.85800 301 5 0.90538 316 5 0.950638 150 4 0.93303 125 3 0.954256 171 5 0.92338 0.87180 0.87484 0.91822 0.87263 0.91757 0.90442 0.92047 0.967591 0.94969 0.89833 0.88771 0.967429 0.93864 0.87066 0.900092 0.924368 0.94963 0.940296 0.95995 0.88950 0.792394 0.92427 0.86852 0.87925 0.94044 0.90519 0.94753 0.91198 0.92063 0.915440 0.93549 0.713097 0.688941 0.91561 0.47834 0.76305 0.902334 0.93656 0.92619 0.968294 0.90641 0.94590 4 0.91911 0.92111 -0.00088314 6 0.81279 0.81166 0.0011334 1.3123e-01 5.7964e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1755e-02 0.89446095 insignificant 1.0000000 1.000000 insignificant 0.0216525 0.267348 insignificant 1 insignificant 0.91933 0.77769 0.158736 6 0.91705 0.77032 0.1467396 7.4356e-11 8.9509e-01 weaklyHypermeth 2.9742e-09 1.0000e+00 weaklyHypermeth 3.4172e-06 9.7645e-01 weaklyHypermeth 2.6826e-04 1.0000e+00 weaklyHypermeth 0.195957 5.1479e-03 weaklyHypermeth 0.1391331 insignificant 0.91933 0.92568 -0.0026650 5 0.91705 0.89901 0.018043 9.1828e-02 3.6073e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.2948e-01 0.65179215 insignificant 1.0000e+00 1.00000 insignificant -0.0060610 7.7344e-01 lowCoverage 1.0000000 lowCoverage 0.92180 0.77769 0.151392 6 0.91554 0.77032 0.145228 9.1979e-08 4.3775e-01 weaklyHypermeth 2.9671e-06 1.0000e+00 weaklyHypermeth 2.2958e-04 5.9377e-01 weaklyHypermeth 8.5029e-03 1.0000e+00 weaklyHypermeth 0.174304 7.5404e-03 weaklyHypermeth 0.2356385 insignificant 0.92180 0.92568 -0.0028491 5 0.91554 0.89901 0.0165317 1.9563e-01 0.271847 insignificant 1.0000e+00 1 insignificant 6.6645e-01 0.135943 insignificant 1.0000e+00 1 insignificant -0.0277135 0.27642736 lowCoverage 1.000000 lowCoverage 0.77769 0.92568 -0.1465921 5 0.77032 0.89901 -0.1286967 9.2210e-01 3.6941e-03 weaklyHypometh 1.0000e+00 9.3526e-02 weaklyHypometh 9.9882e-01 7.1151e-03 weaklyHypometh 1.0000e+00 2.3191e-01 insignificant -0.2020178 3.7086e-03 lowCoverage 0.2139643 lowCoverage chr1 153469850 153470850 9358 ENSG00000217829 0.92044 105 8 0.77378 146 8 0.85556 181 8 0.88890 128 8 0.686389 66 6 0.80165 253 8 0.87137 106 8 0.94349 194 8 0.78479 167 8 0.86536 201 8 0.74427 180 8 0.76768 73 5 0.93013 169 8 0.899877 128 8 0.922818 205 8 0.827899 99 7 0.798554 51 5 0.88590 150 8 0.78736 79 7 0.96167 193 8 0.79444 63 4 0.97282 84 7 0.96921 111 8 0.830247 77 7 0.95294 67 5 0.91657 187 8 0.951007 72 6 0.75106 94 8 0.84958 135 8 0.788370 190 8 0.98624 150 8 0.93374 221 8 0.87088 118 8 0.90084 81 8 0.72432 163 4 1.00000 9 0 0.82204 181 8 0.96371 165 8 0.95296 96 7 0.92897 110 8 0.903592 82 8 0.96850 115 8 0.982143 89 8 0.92020 0.90033 0.93888 0.89851 0.87166 0.90259 0.87992 0.92791 0.886502 0.91457 0.93273 0.89983 0.939684 0.91033 0.94517 0.893292 0.956889 0.89664 0.800216 0.95129 0.97990 0.963892 0.95683 0.91796 0.91279 0.93338 0.89588 0.82944 0.83680 0.98450 0.980093 0.93450 0.885068 0.908649 0.92553 0.99406 0.75229 0.963940 0.95838 0.94776 0.886663 0.96151 0.98833 4 0.90988 0.92764 -0.01648270 8 0.71767 0.74446 -0.0267862 9.7124e-01 2.9390e-03 weaklyHypometh 1.0000e+00 0.587798 insignificant 9.9752e-01 0.00025696 weaklyHypometh 1.0000000 0.085653 weaklyHypometh -0.0454569 0.136687 insignificant 1 insignificant 0.91623 0.88703 0.029793 8 0.86922 0.79236 0.0768595 4.6675e-02 7.4915e-01 weaklyHypermeth 6.3074e-01 1.0000e+00 insignificant 9.4908e-01 3.8938e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.034405 4.6035e-01 insignificant 1.0000000 insignificant 0.91652 0.95122 -0.0382702 8 0.91537 0.94968 -0.034305 9.8278e-01 3.6927e-03 weaklyHypometh 1.0000e+00 0.4615878 insignificant 9.7518e-01 0.00892867 weaklyHypometh 1.0000e+00 0.89287 insignificant -0.1013379 2.5909e-04 weaklyHypometh 0.0235539 weaklyHypometh 0.93010 0.88703 0.044248 8 0.83582 0.79236 0.043461 1.1521e-02 9.5962e-01 weaklyHypermeth 1.6942e-01 1.0000e+00 insignificant 1.6745e-01 8.0416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.011051 8.2046e-01 insignificant 1.0000000 insignificant 0.93139 0.95122 -0.0181229 8 0.94030 0.94968 -0.0093786 5.9774e-01 0.284015 insignificant 1.0000e+00 1 insignificant 4.6732e-01 0.236941 insignificant 1.0000e+00 1 insignificant -0.0558810 0.06351593 insignificant 1.000000 insignificant 0.88827 0.95122 -0.0662032 8 0.89140 0.94968 -0.0582717 9.9685e-01 4.0719e-02 weaklyHypometh 1.0000e+00 6.2644e-01 insignificant 9.5998e-01 3.6906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0669324 1.6921e-01 insignificant 1.0000000 insignificant chr1 153470107 153471107 9359 ENSG00000217829 0.92044 105 8 0.77378 146 8 0.85556 181 8 0.88890 128 8 0.686389 66 6 0.80165 253 8 0.87137 106 8 0.94349 194 8 0.78479 167 8 0.86536 201 8 0.74427 180 8 0.76768 73 5 0.93013 169 8 0.899877 128 8 0.922818 205 8 0.827899 99 7 0.798554 51 5 0.88590 150 8 0.78736 79 7 0.96167 193 8 0.79444 63 4 0.97282 84 7 0.96921 111 8 0.830247 77 7 0.95294 67 5 0.91657 187 8 0.951007 72 6 0.75106 94 8 0.84958 135 8 0.788370 190 8 0.98624 150 8 0.93374 221 8 0.87088 118 8 0.90084 81 8 0.72432 163 4 1.00000 9 0 0.82204 181 8 0.96371 165 8 0.95296 96 7 0.92897 110 8 0.903592 82 8 0.96850 115 8 0.982143 89 8 0.92020 0.90033 0.93888 0.89851 0.87166 0.90259 0.87992 0.92791 0.886502 0.91457 0.93273 0.89983 0.939684 0.91033 0.94517 0.893292 0.956889 0.89664 0.800216 0.95129 0.97990 0.963892 0.95683 0.91796 0.91279 0.93338 0.89588 0.82944 0.83680 0.98450 0.980093 0.93450 0.885068 0.908649 0.92553 0.99406 0.75229 0.963940 0.95838 0.94776 0.886663 0.96151 0.98833 4 0.90988 0.92764 -0.01648270 8 0.71767 0.74446 -0.0267862 9.7124e-01 2.9390e-03 weaklyHypometh 1.0000e+00 0.587798 insignificant 9.9752e-01 0.00025696 weaklyHypometh 1.0000000 0.085653 weaklyHypometh -0.0454569 0.136687 insignificant 1 insignificant 0.91623 0.88703 0.029793 8 0.86922 0.79236 0.0768595 4.6675e-02 7.4915e-01 weaklyHypermeth 6.3074e-01 1.0000e+00 insignificant 9.4908e-01 3.8938e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.034405 4.6035e-01 insignificant 1.0000000 insignificant 0.91652 0.95122 -0.0382702 8 0.91537 0.94968 -0.034305 9.8278e-01 3.6927e-03 weaklyHypometh 1.0000e+00 0.4615878 insignificant 9.7518e-01 0.00892867 weaklyHypometh 1.0000e+00 0.89287 insignificant -0.1013379 2.5909e-04 weaklyHypometh 0.0235539 weaklyHypometh 0.93010 0.88703 0.044248 8 0.83582 0.79236 0.043461 1.1521e-02 9.5962e-01 weaklyHypermeth 1.6942e-01 1.0000e+00 insignificant 1.6745e-01 8.0416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.011051 8.2046e-01 insignificant 1.0000000 insignificant 0.93139 0.95122 -0.0181229 8 0.94030 0.94968 -0.0093786 5.9774e-01 0.284015 insignificant 1.0000e+00 1 insignificant 4.6732e-01 0.236941 insignificant 1.0000e+00 1 insignificant -0.0558810 0.06351593 insignificant 1.000000 insignificant 0.88827 0.95122 -0.0662032 8 0.89140 0.94968 -0.0582717 9.9685e-01 4.0719e-02 weaklyHypometh 1.0000e+00 6.2644e-01 insignificant 9.5998e-01 3.6906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0669324 1.6921e-01 insignificant 1.0000000 insignificant chr1 154626613 154627613 9398 RHBG ENSG00000132677 0.58377 84 5 0.56421 81 5 0.52430 121 5 0.58452 82 5 0.357895 65 5 0.48409 175 5 0.41456 77 5 0.47821 130 5 0.39424 70 5 0.41016 58 5 0.48939 153 5 0.61895 53 5 0.28495 85 5 0.560000 86 5 0.364739 100 5 0.390909 22 2 0.766667 10 0 0.69416 72 2 0.34667 19 2 0.31919 112 5 0.76000 21 1 0.56393 51 5 0.58889 75 2 0.262913 48 5 0.29524 16 1 0.60170 155 5 0.381905 27 3 0.72826 40 2 0.72893 45 5 0.513472 174 5 0.53271 109 5 0.30524 190 5 0.63258 98 5 0.25455 29 2 0.50669 164 2 1.00000 3 0 0.58516 133 5 0.37164 101 5 0.60762 45 5 0.70619 53 2 0.639394 30 2 0.66581 61 2 0.367832 33 2 0.60200 0.46454 0.48588 0.47991 0.38548 0.46072 0.42103 0.47837 0.346110 0.27763 0.42951 0.47772 0.213425 0.42913 0.28920 0.475407 0.703196 0.45275 0.215525 0.23887 0.61644 0.333930 0.50000 0.21044 0.23973 0.50313 0.20548 0.56090 0.53921 0.38521 0.440667 0.22262 0.348641 0.160648 0.54390 0.42098 0.44429 0.197609 0.45245 0.56142 0.496264 0.62282 0.39279 1 0.45586 0.45531 -0.00885815 5 0.47486 0.49953 -0.0246659 6.8940e-01 2.2724e-01 insignificant 1.0000e+00 1.000000 insignificant 6.4948e-01 0.12640907 insignificant 1.0000000 1.000000 insignificant -0.0403547 0.498516 lowCoverage 1 lowCoverage 0.45586 0.43371 -0.021561 5 0.47486 0.56333 -0.0884715 6.8528e-01 5.1007e-03 weaklyHypometh 1.0000e+00 6.6679e-01 insignificant 1.8619e-01 8.7269e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.076858 5.0805e-01 lowCoverage 1.0000000 lowCoverage 0.45586 0.55856 -0.1278275 2 0.47486 0.61810 -0.143243 9.9971e-01 5.8963e-04 lowCoverage 1.0000e+00 0.1474063 lowCoverage 9.9650e-01 0.02703472 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1157918 1.3091e-01 lowCoverage 1.0000000 lowCoverage 0.45531 0.43371 -0.018463 5 0.49953 0.56333 -0.063806 8.0944e-01 6.6125e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7511e-01 4.1491e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.036504 7.6299e-01 lowCoverage 1.0000000 lowCoverage 0.45531 0.55856 -0.1307208 2 0.49953 0.61810 -0.1185769 9.9643e-01 0.013002 lowCoverage 1.0000e+00 1 lowCoverage 9.1040e-01 0.099031 lowCoverage 1.0000e+00 1 lowCoverage -0.0754370 0.35802013 lowCoverage 1.000000 lowCoverage 0.43371 0.55856 -0.1255971 2 0.56333 0.61810 -0.0547713 3.6035e-01 1.0141e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.7004e-01 1.2615e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0389335 7.5575e-01 lowCoverage 1.0000000 lowCoverage chr1 154636415 154637415 9399 RHBG ENSG00000132677 0.72072 470 13 0.61709 135 13 0.84136 167 8 0.77631 474 12 0.758929 63 8 0.70401 465 14 0.89355 190 11 0.60425 145 8 0.69197 242 13 0.86476 278 12 0.78337 230 12 0.70484 315 13 0.69680 432 12 0.688732 223 12 0.722481 336 11 0.912821 110 10 0.751716 91 9 0.79741 589 12 0.71815 159 12 0.70592 328 14 0.41590 105 10 0.62572 218 13 0.78673 204 12 0.671447 120 14 0.70774 198 12 0.51668 244 12 0.643269 137 14 0.74755 102 8 0.68021 132 9 0.666906 195 12 0.54426 141 9 0.76152 395 12 0.33746 131 8 0.44789 168 12 0.47500 140 4 0.36772 136 12 0.40404 180 13 0.72480 199 8 0.52377 484 12 0.77118 419 13 0.720431 521 12 0.82244 569 12 0.422572 485 12 0.74730 0.69519 0.82643 0.77806 0.85157 0.78066 0.87666 0.74908 0.784042 0.83841 0.83433 0.78189 0.768508 0.76244 0.79676 0.945926 0.745346 0.73528 0.691054 0.73623 0.52835 0.747344 0.81451 0.80158 0.71974 0.66076 0.68352 0.75871 0.73578 0.67235 0.572407 0.72207 0.303116 0.322891 0.41734 0.31669 0.41151 0.548565 0.57875 0.75918 0.751930 0.76988 0.44259 7 0.77894 0.69941 0.07118721 12 0.72636 0.63843 0.0879277 2.3458e-09 9.9999e-01 weaklyHypermeth 2.3458e-06 1.000000 weaklyHypermeth 3.3745e-06 0.99999695 weaklyHypermeth 0.0033745 1.000000 weaklyHypermeth 0.1004327 0.012681 weaklyHypermeth 1 insignificant 0.77894 0.32809 0.435153 12 0.72636 0.39959 0.3267747 3.5829e-57 1.0000e+00 hypermethylated 3.5829e-54 1.0000e+00 hypermethylated 5.1045e-15 1.0000e+00 hypermethylated 2.5522e-12 1.0000e+00 hypermethylated 0.288275 2.8227e-03 weaklyHypermeth 0.1008116 insignificant 0.77894 0.67070 0.1213567 12 0.72636 0.59939 0.126971 6.2698e-13 9.9994e-01 weaklyHypermeth 1.2540e-10 1.0000000 weaklyHypermeth 6.2603e-07 0.99984957 weaklyHypermeth 2.0778e-04 1.00000 weaklyHypermeth 0.0956814 2.8423e-01 insignificant 1.0000000 insignificant 0.69941 0.32809 0.367991 11 0.63843 0.39959 0.238847 3.3416e-24 9.9999e-01 hypermethylated 1.1139e-21 1.0000e+00 hypermethylated 1.9966e-08 9.9640e-01 hypermethylated 4.9914e-06 1.0000e+00 hypermethylated 0.187842 1.9766e-02 weaklyHypermeth 0.4706214 insignificant 0.69941 0.67070 0.0487563 12 0.63843 0.59939 0.0390436 2.2318e-03 0.718580 weaklyHypermeth 1.1281e-01 1 insignificant 2.6891e-02 0.794246 weaklyHypermeth 1.0000e+00 1 insignificant -0.0047513 0.95623644 insignificant 1.000000 insignificant 0.32809 0.67070 -0.3243926 11 0.39959 0.59939 -0.1998034 9.9998e-01 9.5141e-11 hypomethylated 1.0000e+00 3.1714e-08 hypomethylated 9.9950e-01 1.3255e-04 hypomethylated 1.0000e+00 1.8936e-02 hypomethylated -0.1925936 7.9172e-02 insignificant 1.0000000 insignificant chr1 154980484 154981484 9427 MRPL24 ENSG00000143314 0.89140 217 6 0.81419 161 6 0.73174 126 5 0.80094 266 5 0.725505 47 4 0.70158 253 6 0.79952 70 5 0.87668 146 5 0.73187 120 8 0.87348 92 9 0.78586 176 8 0.74471 37 1 0.91538 106 5 0.892857 62 7 0.758672 117 6 0.703704 19 0 0.441667 15 1 0.88914 247 9 0.86484 148 7 0.70187 189 6 0.88505 76 7 0.82277 80 4 0.80054 137 6 0.593771 68 4 0.94829 111 5 0.94589 180 6 0.618673 123 6 0.61369 38 4 0.84246 96 6 0.833404 207 6 0.82208 194 5 0.78820 252 5 0.80895 128 5 0.54232 113 5 0.53708 127 4 0.73148 53 3 0.61886 94 5 0.91078 188 5 0.65334 136 6 0.80809 223 6 0.781333 203 5 0.85495 114 5 0.874376 176 5 0.80990 0.82790 0.68984 0.82320 0.82122 0.83919 0.75094 0.88354 0.835842 0.85323 0.80186 0.69905 0.879740 0.90401 0.82986 0.705326 0.795611 0.90173 0.907696 0.93764 0.91601 0.962092 0.79320 0.71303 0.87731 0.90843 0.74627 0.68758 0.85287 0.91437 0.857274 0.87511 0.856274 0.779348 0.61928 0.82629 0.86981 0.941541 0.82896 0.82296 0.810510 0.79371 0.90946 2 0.85157 0.85842 -0.00851559 5 0.72374 0.71374 0.0100038 8.6192e-01 7.4479e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6761e-01 0.70740791 insignificant 1.0000000 1.000000 insignificant -0.0106217 0.806493 insignificant 1 insignificant 0.85222 0.81508 0.034702 5 0.79612 0.69695 0.0991743 5.4180e-03 5.3454e-01 weaklyHypermeth 8.6000e-02 1.0000e+00 weaklyHypermeth 1.6529e-01 5.7249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.090702 2.1700e-01 lowCoverage 1.0000000 lowCoverage 0.85222 0.90610 -0.0042416 5 0.79612 0.75314 0.042976 2.3704e-01 6.3300e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.6255e-01 0.83793497 insignificant 1.0000e+00 1.00000 insignificant -0.0121385 7.9855e-01 insignificant 1.0000000 insignificant 0.86008 0.81508 0.041102 5 0.78512 0.69695 0.088170 1.7445e-02 4.7042e-01 weaklyHypermeth 2.4570e-01 1.0000e+00 insignificant 1.7015e-01 5.6402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.101324 1.9097e-01 lowCoverage 1.0000000 lowCoverage 0.86008 0.90610 0.0029125 5 0.78512 0.75314 0.0319714 3.6660e-01 0.694957 insignificant 1.0000e+00 1 insignificant 4.3800e-01 0.911300 insignificant 1.0000e+00 1 insignificant -0.0015168 0.97749657 insignificant 1.000000 insignificant 0.81508 0.90610 -0.0514378 5 0.69695 0.75314 -0.0561987 8.4945e-01 4.0817e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1478e-01 7.2028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1028404 1.9649e-01 lowCoverage 1.0000000 lowCoverage chr1 155152546 155153546 9440 PEAR1 ENSG00000187800 0.45550 83 2 0.57134 125 5 0.50667 54 5 0.77249 101 5 0.639520 61 5 0.73538 198 5 0.63071 41 5 0.79968 108 5 0.63040 47 5 0.78333 22 2 0.76237 145 5 0.74000 18 2 0.64127 61 5 0.653333 40 5 0.823333 42 5 0.733333 9 0 0.866667 15 3 0.56361 106 5 0.76468 69 5 0.66055 64 5 0.65366 312 5 0.66000 33 3 0.90909 56 2 0.776786 62 5 0.73259 126 5 0.71638 82 5 0.763873 599 5 0.48531 69 5 0.70079 78 5 0.704782 136 5 0.74230 79 5 0.75806 83 5 0.61423 124 5 0.61986 70 5 0.55836 110 5 0.75000 8 0 0.61144 71 5 0.59197 86 5 0.57563 71 4 0.71292 91 5 0.650952 65 5 0.66833 60 3 0.554226 73 5 0.51011 0.60502 0.53135 0.77355 0.66969 0.74312 0.65363 0.81328 0.665180 0.76898 0.77234 0.74752 0.657237 0.66007 0.84241 0.719472 0.790209 0.56706 0.764105 0.66359 0.65059 0.692079 0.88749 0.78006 0.71350 0.71355 0.79304 0.50945 0.72375 0.71844 0.750170 0.75235 0.610214 0.632852 0.57183 0.69060 0.63421 0.606262 0.60681 0.72061 0.673208 0.63655 0.57154 0 0.70007 0.72070 -0.01803391 5 0.69415 0.71187 -0.0177143 8.8660e-01 2.8342e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8146e-01 0.40811500 insignificant 1.0000000 1.000000 insignificant -0.0302609 0.426757 lowCoverage 1 lowCoverage 0.70007 0.61407 0.089449 5 0.69415 0.60230 0.0918482 1.7379e-03 9.9992e-01 weaklyHypermeth 3.0489e-02 1.0000e+00 weaklyHypermeth 5.9184e-03 9.9964e-01 weaklyHypermeth 1.2696e-01 1.0000e+00 insignificant 0.062399 1.0663e-01 lowCoverage 1.0000000 lowCoverage 0.70007 0.65000 0.0472907 5 0.69415 0.63199 0.062159 4.3980e-02 9.3169e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 5.3472e-02 0.98365261 insignificant 1.0000e+00 1.00000 insignificant 0.0542963 1.8600e-01 lowCoverage 1.0000000 lowCoverage 0.72070 0.61407 0.106243 5 0.71187 0.60230 0.109563 1.2319e-05 1.0000e+00 weaklyHypermeth 3.1586e-04 1.0000e+00 weaklyHypermeth 4.5186e-04 9.9940e-01 weaklyHypermeth 1.4962e-02 1.0000e+00 weaklyHypermeth 0.092660 3.2063e-02 lowCoverage 0.6412613 lowCoverage 0.72070 0.65000 0.0730169 5 0.71187 0.63199 0.0798738 5.1238e-03 0.973270 weaklyHypermeth 1.9707e-01 1 insignificant 1.4836e-02 0.999215 weaklyHypermeth 8.0832e-01 1 insignificant 0.0845572 0.06286162 lowCoverage 1.000000 lowCoverage 0.61407 0.65000 -0.0409190 5 0.60230 0.63199 -0.0296888 5.9610e-01 6.6279e-02 insignificant 1.0000e+00 9.2054e-01 insignificant 4.4831e-01 4.8450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0081026 8.4363e-01 lowCoverage 1.0000000 lowCoverage chr1 156243946 156244946 9465 KIRREL ENSG00000183853 0.51336 460 9 0.33730 433 10 0.51001 220 8 0.51077 450 9 0.401456 192 11 0.60021 538 10 0.42964 242 10 0.47362 323 10 0.36493 297 10 0.46026 208 9 0.49568 443 10 0.32276 184 10 0.26659 344 11 0.548061 124 7 0.373375 279 11 0.474415 189 10 0.275508 1092 7 0.32249 704 9 0.39558 393 10 0.38799 496 9 0.55872 141 9 0.20604 258 8 0.56786 307 10 0.431916 260 9 0.43846 330 8 0.42098 441 9 0.352850 347 10 0.33078 168 8 0.49265 295 9 0.417564 496 9 0.51960 439 10 0.50598 438 9 0.14718 327 10 0.13820 276 9 0.10348 391 8 0.28508 170 6 0.19645 308 10 0.17951 422 9 0.20739 617 9 0.26036 489 10 0.279334 548 9 0.30200 461 7 0.277734 536 9 0.45995 0.35467 0.47873 0.44715 0.44339 0.65131 0.49264 0.52506 0.431855 0.53917 0.56517 0.34441 0.289412 0.46818 0.41637 0.466580 0.306257 0.30347 0.446525 0.41466 0.55707 0.201130 0.58806 0.52833 0.47915 0.42207 0.43209 0.41560 0.44964 0.44973 0.426301 0.50884 0.120044 0.102066 0.12298 0.23579 0.19187 0.090671 0.17806 0.21298 0.271149 0.24600 0.25230 8 0.43094 0.45930 -0.02222028 9 0.38130 0.44280 -0.0614981 9.5230e-01 1.5901e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8277e-01 0.20097156 insignificant 1.0000000 1.000000 insignificant -0.0137522 0.710263 insignificant 1 insignificant 0.43116 0.13358 0.292556 9 0.41597 0.14454 0.2714281 5.2024e-28 1.0000e+00 hypermethylated 1.0405e-25 1.0000e+00 hypermethylated 6.3610e-16 1.0000e+00 hypermethylated 6.3610e-13 1.0000e+00 hypermethylated 0.248217 6.2283e-06 hypermethylated 0.0011411 hypermethylated 0.43739 0.24859 0.2099407 9 0.50688 0.24651 0.260370 1.8920e-13 9.9999e-01 hypermethylated 4.7300e-11 1.0000000 hypermethylated 1.0523e-12 0.99999979 hypermethylated 1.0523e-09 1.00000 hypermethylated 0.1578357 1.0346e-05 weaklyHypermeth 0.0020692 weaklyHypermeth 0.45928 0.13358 0.317682 9 0.43760 0.14454 0.293062 6.5725e-28 1.0000e+00 hypermethylated 3.2863e-25 1.0000e+00 hypermethylated 3.0078e-15 1.0000e+00 hypermethylated 3.0078e-12 1.0000e+00 hypermethylated 0.261970 7.6986e-06 hypermethylated 0.0015397 hypermethylated 0.46294 0.24868 0.2290082 9 0.48136 0.27116 0.2102051 1.8674e-17 1.000000 hypermethylated 1.8674e-14 1 hypermethylated 1.6714e-11 1.000000 hypermethylated 1.6714e-08 1 hypermethylated 0.1715879 0.00014921 weaklyHypermeth 0.029843 weaklyHypermeth 0.13436 0.24868 -0.0950473 9 0.15899 0.27116 -0.1121635 9.9538e-01 4.5184e-07 weaklyHypometh 1.0000e+00 4.5184e-05 weaklyHypometh 9.9654e-01 4.5023e-04 weaklyHypometh 1.0000e+00 5.0025e-02 weaklyHypometh -0.0903817 1.7190e-02 weaklyHypometh 0.5371990 insignificant chr1 162846257 162847257 9823 PBX1 ENSG00000185630 0.77914 164 5 0.80574 45 4 0.57357 47 5 0.90441 83 5 0.785556 39 5 0.78765 169 5 0.89082 62 5 0.61270 55 4 0.72667 57 4 0.72652 69 5 0.82704 96 5 0.66667 41 5 0.90500 47 5 NA 0 0 0.859804 81 5 0.647619 50 5 0.655000 68 5 0.83342 83 5 0.71998 88 5 0.91881 122 5 0.75000 12 1 0.86128 37 3 0.85066 120 5 0.700000 10 2 0.91000 26 4 0.63420 96 5 0.881429 24 3 0.92000 13 1 0.94286 44 4 0.833535 95 5 0.78805 69 5 0.83605 161 5 0.56786 28 2 0.62345 58 5 0.74585 90 5 0.83404 51 5 0.80167 33 5 0.79909 99 5 0.88186 165 5 0.81928 138 5 0.821220 113 5 0.80669 149 5 0.828919 164 5 0.77301 0.76998 0.64588 0.92249 0.78838 0.78594 0.89573 0.66367 0.746599 0.70717 0.82750 0.68639 0.890306 NA 0.84300 0.684281 0.686224 0.83351 0.739884 0.91864 0.68112 0.845238 0.84561 0.73743 0.88316 0.64435 0.87172 0.89796 0.92711 0.82310 0.787503 0.84005 0.537719 0.646805 0.78609 0.81399 0.76412 0.803387 0.90347 0.83900 0.836978 0.82914 0.81249 1 0.80082 0.82320 -0.01656858 5 0.79462 0.82088 -0.0262583 8.3479e-01 1.6571e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7998e-01 0.01374348 weaklyHypometh 1.0000000 1.000000 insignificant -0.0558775 0.133000 lowCoverage 1 lowCoverage 0.80082 0.76602 0.041429 5 0.79462 0.75464 0.0399822 1.3476e-01 9.4897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8494e-01 8.3574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.041136 4.3697e-01 lowCoverage 1.0000000 lowCoverage 0.80082 0.83128 -0.0427229 5 0.79462 0.83532 -0.040697 9.6702e-01 4.2889e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.6606e-01 0.02436081 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0617978 3.4657e-02 lowCoverage 1.0000000 lowCoverage 0.82320 0.76602 0.058062 5 0.82088 0.75464 0.066240 7.2349e-02 9.9468e-01 insignificant 8.9320e-01 1.0000e+00 insignificant 3.8025e-02 9.9838e-01 weaklyHypermeth 6.1330e-01 1.0000e+00 insignificant 0.097014 9.3923e-02 lowCoverage 1.0000000 lowCoverage 0.82320 0.83128 -0.0256452 5 0.82088 0.83532 -0.0144383 7.2965e-01 0.213453 insignificant 1.0000e+00 1 insignificant 2.2371e-01 0.645641 insignificant 1.0000e+00 1 insignificant -0.0059203 0.84514411 lowCoverage 1.000000 lowCoverage 0.76602 0.83128 -0.0832245 5 0.75464 0.83532 -0.0806788 9.9653e-01 2.3931e-02 weaklyHypometh 1.0000e+00 4.0561e-01 insignificant 9.8574e-01 3.6413e-02 weaklyHypometh 1.0000e+00 7.9160e-01 insignificant -0.1029340 6.8062e-02 lowCoverage 1.0000000 lowCoverage chr1 162947473 162948473 9854 ENSG00000208426 0.86410 703 6 0.63972 515 7 0.85950 154 6 0.74249 514 6 0.705865 128 6 0.80065 716 6 0.67132 208 6 0.76374 193 6 0.86691 202 6 0.92715 98 2 0.83117 360 6 0.78030 104 2 0.94339 118 6 0.821347 131 6 0.794123 157 6 0.975152 137 6 0.750000 8 0 0.84121 684 6 0.95539 357 6 0.86837 537 6 0.87999 74 6 0.48901 62 2 0.73789 282 6 0.632739 121 6 0.94574 281 6 0.87984 412 6 0.817101 203 6 0.78492 100 6 0.88225 339 6 0.896706 491 6 0.92588 499 6 0.93305 482 6 0.71443 360 6 0.45842 138 6 0.64322 440 6 0.85586 193 6 0.39712 336 6 0.97681 417 6 0.75428 417 6 0.80760 367 6 0.651956 581 6 0.55924 199 6 0.686293 430 6 0.82684 0.63714 0.89083 0.80471 0.79568 0.74907 0.81938 0.84469 0.835422 0.83220 0.83188 0.71131 0.869403 0.82505 0.92165 0.938222 0.775705 0.81184 0.920323 0.84898 0.79828 0.456945 0.72818 0.77389 0.89567 0.82430 0.73256 0.87702 0.80793 0.86294 0.892482 0.88275 0.803831 0.360203 0.82921 0.94655 0.47359 0.959449 0.71268 0.77423 0.657991 0.46329 0.66947 6 0.82149 0.86108 -0.03876659 6 0.77602 0.84489 -0.0688783 9.8828e-01 7.3281e-05 weaklyHypometh 1.0000e+00 0.073281 weaklyHypometh 8.8072e-01 0.53868684 insignificant 1.0000000 1.000000 insignificant 0.0030008 0.947437 insignificant 1 insignificant 0.82149 0.68667 0.128949 6 0.77602 0.65931 0.1167045 2.1022e-05 9.9779e-01 weaklyHypermeth 4.7778e-04 1.0000e+00 weaklyHypermeth 1.0795e-03 8.9092e-01 weaklyHypermeth 2.8408e-02 1.0000e+00 weaklyHypermeth 0.145783 1.7492e-01 insignificant 1.0000000 insignificant 0.82237 0.68556 0.1371930 6 0.82757 0.69490 0.132670 2.4437e-10 1.0000e+00 weaklyHypermeth 3.4910e-08 1.0000000 weaklyHypermeth 2.5933e-07 0.99999997 weaklyHypermeth 1.2966e-04 1.00000 weaklyHypermeth 0.1282195 3.5366e-02 weaklyHypermeth 1.0000000 insignificant 0.86031 0.68684 0.167663 6 0.73928 0.70190 0.037385 1.1578e-05 9.9959e-01 weaklyHypermeth 3.0468e-04 1.0000e+00 weaklyHypermeth 4.7788e-02 9.7365e-01 weaklyHypermeth 6.9261e-01 1.0000e+00 insignificant 0.142782 1.9532e-01 insignificant 1.0000000 insignificant 0.86125 0.68556 0.1729753 6 0.87460 0.69490 0.1796950 7.7677e-13 1.000000 weaklyHypermeth 1.9419e-10 1 weaklyHypermeth 9.0501e-05 1.000000 weaklyHypermeth 1.1313e-02 1 weaklyHypermeth 0.1252188 0.05528582 insignificant 1.000000 insignificant 0.68687 0.68556 -0.0045661 6 0.68586 0.69490 -0.0090405 4.7634e-01 5.0311e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1104e-01 4.8234e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0175637 8.6669e-01 insignificant 1.0000000 insignificant chr1 163398342 163399342 9932 ENSG00000212086 0.72795 197 6 0.60734 170 7 0.66954 82 5 0.66655 220 6 0.671939 57 7 0.75180 175 7 0.77381 33 2 0.73794 77 5 0.85583 75 4 0.66500 78 4 0.74325 149 7 0.53750 15 1 0.74191 94 4 0.605000 39 4 0.477101 69 4 0.333333 20 3 0.474675 38 4 0.32403 205 4 0.87856 85 4 0.75734 140 4 0.80000 24 3 0.36477 74 4 0.68799 92 5 0.396238 68 6 0.75641 56 5 0.72650 163 8 0.636111 36 4 0.76857 38 3 0.91191 102 5 0.745879 217 8 0.83991 161 8 0.71812 181 7 0.60911 145 7 0.31240 92 5 0.26786 133 4 0.45333 102 4 0.58336 73 6 0.56541 225 8 0.56793 206 7 0.40805 198 7 0.457275 196 7 0.51929 151 4 0.477037 263 7 0.69938 0.61429 0.54296 0.81089 0.74476 0.74185 0.72262 0.72730 0.790286 0.70833 0.80404 0.51905 0.749580 0.49881 0.59746 0.575482 0.481534 0.42633 0.824704 0.72044 0.69429 0.366806 0.75937 0.36740 0.68156 0.67671 0.70698 0.71109 0.89287 0.71605 0.813673 0.71400 0.686893 0.399592 0.51073 0.60200 0.72115 0.591166 0.49080 0.34453 0.370314 0.28011 0.41251 3 0.66700 0.69860 -0.02834708 5 0.68467 0.73193 -0.0472528 9.7140e-01 8.1037e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7717e-01 0.30025714 insignificant 1.0000000 1.000000 insignificant -0.0460129 0.438893 lowCoverage 1 lowCoverage 0.66700 0.45714 0.109946 5 0.68467 0.48778 0.1968909 1.0565e-09 3.8962e-01 weaklyHypermeth 3.7733e-08 1.0000e+00 weaklyHypermeth 1.4021e-03 5.8195e-01 weaklyHypermeth 3.5952e-02 1.0000e+00 weaklyHypermeth 0.184775 2.6173e-02 lowCoverage 0.5568761 lowCoverage 0.66700 0.40434 0.2736377 5 0.68467 0.48597 0.198703 1.4653e-11 9.9873e-01 hypermethylated 2.4421e-09 1.0000000 hypermethylated 3.6686e-06 0.99072441 hypermethylated 5.2408e-04 1.00000 hypermethylated 0.1641045 1.5360e-03 lowCoverage 0.1181570 lowCoverage 0.69860 0.45714 0.141950 6 0.73193 0.48778 0.244144 5.4997e-10 5.5861e-01 weaklyHypermeth 2.3912e-08 1.0000e+00 weaklyHypermeth 5.7172e-04 7.1155e-01 weaklyHypermeth 1.7325e-02 1.0000e+00 weaklyHypermeth 0.230788 1.1225e-02 weaklyHypermeth 0.3301450 insignificant 0.69860 0.40434 0.2995741 6 0.73193 0.48597 0.2459560 5.2807e-11 0.999520 hypermethylated 1.0561e-08 1 hypermethylated 8.4647e-06 0.998783 hypermethylated 2.1162e-03 1 hypermethylated 0.2101175 0.00155781 weaklyHypermeth 0.190608 insignificant 0.45714 0.40434 0.1341383 6 0.48778 0.48597 0.0018123 6.5381e-04 3.3808e-02 weaklyHypermeth 8.1726e-02 5.3724e-01 weaklyHypermeth 6.3420e-02 4.9416e-02 inconclusive 1.0000e+00 9.5032e-01 insignificant -0.0206701 7.6221e-01 insignificant 1.0000000 insignificant chr1 164510897 164511897 10003 FAM78B ENSG00000188859 0.90033 328 6 0.91952 169 6 0.73570 141 5 0.928237 308 5 0.85972 92 5 0.87085 385 6 0.913552 139 5 0.825463 149 6 0.862942 171 5 0.97897 157 5 0.889762 164 6 0.78361 165 6 0.895676 205 6 0.877551 75 5 0.896539 218 5 0.80481 116 6 0.940164 109 5 0.87193 385 6 0.903091 83 5 0.91109 284 6 0.93392 80 5 0.884890 125 6 0.88434 209 6 0.958539 98 6 0.93327 113 5 0.879580 156 6 0.750457 134 6 0.805309 117 6 0.87336 88 5 0.942653 168 6 0.89815 123 6 0.92966 320 6 0.434271 210 6 0.390074 119 5 0.51752 157 3 0.649849 75 5 0.575373 148 6 0.626111 145 6 0.954550 405 5 0.943402 326 5 0.84820 344 5 0.94616 283 4 0.92198 363 6 0.900708 0.894872 0.81939 0.929250 0.899234 0.869711 0.908969 0.81829 0.89913 0.971791 0.920125 0.84393 0.898876 0.855013 0.912142 0.854155 0.905309 0.851807 0.892444 0.926213 0.938028 0.890528 0.889524 0.976607 0.92379 0.894526 0.836154 0.96772 0.798591 0.958386 0.906131 0.926517 0.457174 0.360393 0.488281 0.5556787 0.589739 0.6553604 0.943585 0.91919952 0.908596 0.930814 0.893194 5 0.889670 0.900058 -0.0128392 6 0.89575 0.849484 0.0462662 0.5174941 0.2578871 insignificant 1 1.00000 insignificant 0.941105 0.108752 insignificant 1 1.00000 insignificant -0.0110355 0.612851 insignificant 1 insignificant 0.88955 0.519906 0.368950 6 0.87838 0.50570 0.372674 5.2146e-36 1.0000e+00 hypermethylated 1.3036e-33 1.00000000 hypermethylated 3.5185e-13 1.0000e+00 hypermethylated 8.7963e-11 1.0000e+00 hypermethylated 0.3462759 2.5579e-04 hypermethylated 1.5046e-02 hypermethylated 0.889555 0.915166 -0.0287550 5 0.878375 0.929883 -0.051507 9.9831e-01 0.01556061 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9859e-01 0.01270048 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0443823 0.09260800 insignificant 1.000000 insignificant 0.900870 0.519906 0.384191 6 0.87995 0.50570 0.374253 9.4831e-23 1.0000e+00 hypermethylated 1.5805e-20 1.000000 hypermethylated 2.9315e-11 1.00000000 hypermethylated 7.3288e-09 1.000000 hypermethylated 0.357311 1.3658e-04 hypermethylated 1.3976e-02 hypermethylated 0.900870 0.915166 -0.0141599 5 0.879954 0.929883 -0.049929 9.2006e-01 1.1767e-01 insignificant 1.0000e+00 1.000000 insignificant 7.6038e-01 0.3588537 insignificant 1.0000e+00 1.0000 insignificant -0.0333468 2.2850e-01 insignificant 1.000000 insignificant 0.519906 0.915166 -0.3979754 5 0.505701 0.92988 -0.42418148 1.0000e+00 6.7555e-15 hypomethylated 1.000000 2.2518e-12 hypomethylated 1.00000000 1.7541e-09 hypomethylated 1.00000 8.7703e-07 hypomethylated -0.390658 0.00007464 hypomethylated 0.01866 hypomethylated chr1 164511296 164512296 10004 FAM78B ENSG00000188859 0.90033 328 6 0.91952 169 6 0.73570 141 5 0.928237 308 5 0.85972 92 5 0.87085 385 6 0.913552 139 5 0.825463 149 6 0.862942 171 5 0.97897 157 5 0.889762 164 6 0.78361 165 6 0.895676 205 6 0.877551 75 5 0.896539 218 5 0.80481 116 6 0.940164 109 5 0.87193 385 6 0.903091 83 5 0.91109 284 6 0.93392 80 5 0.884890 125 6 0.88434 209 6 0.958539 98 6 0.93327 113 5 0.879580 156 6 0.750457 134 6 0.805309 117 6 0.87336 88 5 0.942653 168 6 0.89815 123 6 0.92966 320 6 0.434271 210 6 0.390074 119 5 0.51752 157 3 0.649849 75 5 0.575373 148 6 0.626111 145 6 0.954550 405 5 0.943402 326 5 0.84820 344 5 0.94616 283 4 0.92198 363 6 0.900708 0.894872 0.81939 0.929250 0.899234 0.869711 0.908969 0.81829 0.89913 0.971791 0.920125 0.84393 0.898876 0.855013 0.912142 0.854155 0.905309 0.851807 0.892444 0.926213 0.938028 0.890528 0.889524 0.976607 0.92379 0.894526 0.836154 0.96772 0.798591 0.958386 0.906131 0.926517 0.457174 0.360393 0.488281 0.5556787 0.589739 0.6553604 0.943585 0.91919952 0.908596 0.930814 0.893194 5 0.889670 0.900058 -0.0128392 6 0.89575 0.849484 0.0462662 0.5174941 0.2578871 insignificant 1 1.00000 insignificant 0.941105 0.108752 insignificant 1 1.00000 insignificant -0.0110355 0.612851 insignificant 1 insignificant 0.88955 0.519906 0.368950 6 0.87838 0.50570 0.372674 5.2146e-36 1.0000e+00 hypermethylated 1.3036e-33 1.00000000 hypermethylated 3.5185e-13 1.0000e+00 hypermethylated 8.7963e-11 1.0000e+00 hypermethylated 0.3462759 2.5579e-04 hypermethylated 1.5046e-02 hypermethylated 0.889555 0.915166 -0.0287550 5 0.878375 0.929883 -0.051507 9.9831e-01 0.01556061 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9859e-01 0.01270048 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0443823 0.09260800 insignificant 1.000000 insignificant 0.900870 0.519906 0.384191 6 0.87995 0.50570 0.374253 9.4831e-23 1.0000e+00 hypermethylated 1.5805e-20 1.000000 hypermethylated 2.9315e-11 1.00000000 hypermethylated 7.3288e-09 1.000000 hypermethylated 0.357311 1.3658e-04 hypermethylated 1.3976e-02 hypermethylated 0.900870 0.915166 -0.0141599 5 0.879954 0.929883 -0.049929 9.2006e-01 1.1767e-01 insignificant 1.0000e+00 1.000000 insignificant 7.6038e-01 0.3588537 insignificant 1.0000e+00 1.0000 insignificant -0.0333468 2.2850e-01 insignificant 1.000000 insignificant 0.519906 0.915166 -0.3979754 5 0.505701 0.92988 -0.42418148 1.0000e+00 6.7555e-15 hypomethylated 1.000000 2.2518e-12 hypomethylated 1.00000000 1.7541e-09 hypomethylated 1.00000 8.7703e-07 hypomethylated -0.390658 0.00007464 hypomethylated 0.01866 hypomethylated chr1 166526922 166527922 10072 TBX19 ENSG00000143178 0.70589 270 7 0.67164 203 6 0.65611 175 7 0.746232 229 6 0.61926 63 4 0.83733 347 7 0.731349 88 6 0.676616 223 7 0.637060 197 7 0.75729 188 6 0.734349 205 7 0.53175 78 7 0.694941 301 7 0.644584 111 7 0.701560 212 7 0.12816 37 2 0.255556 19 2 0.76225 245 6 0.787699 203 6 0.68557 269 7 0.78377 76 7 0.659399 111 6 0.77694 135 7 0.569689 93 6 0.83050 64 6 0.795257 299 7 0.729739 168 6 0.675000 50 4 0.69542 168 6 0.771603 406 7 0.80171 284 7 0.72879 317 7 0.863159 146 7 0.809697 78 6 0.83753 121 3 0.800000 21 1 0.839662 201 7 0.911798 302 7 0.666296 237 6 0.795464 166 6 0.79497 258 6 0.73244 198 6 0.67225 229 6 0.589887 0.575363 0.47433 0.539280 0.478378 0.728366 0.616898 0.54702 0.51724 0.512195 0.618498 0.47037 0.548091 0.548509 0.534808 0.160857 0.366003 0.593510 0.613206 0.630052 0.732523 0.538964 0.654174 0.461140 0.62591 0.627381 0.605180 0.54250 0.588901 0.631257 0.598355 0.650103 0.626232 0.536374 0.679442 0.5283161 0.728516 0.8462583 0.505262 0.55283748 0.552348 0.543913 0.569594 2 0.615070 0.701059 -0.0408146 7 0.62694 0.737088 -0.1101463 0.9977365 0.0264876 weaklyHypometh 1 1.00000 insignificant 0.998345 0.022781 weaklyHypometh 1 1.00000 insignificant -0.0865583 0.058172 insignificant 1 insignificant 0.61524 0.774453 -0.121520 7 0.71650 0.85642 -0.139913 9.9996e-01 5.4435e-07 weaklyHypometh 1.0000e+00 0.00027218 weaklyHypometh 9.9989e-01 3.2769e-08 weaklyHypometh 1.0000e+00 1.6384e-05 weaklyHypometh -0.1953808 9.3067e-05 weaklyHypometh 8.1843e-03 weaklyHypometh 0.615238 0.545956 0.0280378 6 0.716505 0.740498 -0.023993 3.4397e-01 0.20002875 insignificant 1.0000e+00 1.00000 insignificant 6.4987e-01 0.08083432 insignificant 1.0000e+00 1.00000 insignificant -0.0840230 0.09288860 insignificant 1.000000 insignificant 0.701293 0.774453 -0.079067 7 0.75667 0.85642 -0.099745 9.9928e-01 4.0448e-05 weaklyHypometh 1.0000e+00 0.010919 weaklyHypometh 9.9801e-01 0.00006868 weaklyHypometh 1.0000e+00 0.027794 weaklyHypometh -0.108823 1.0183e-03 weaklyHypometh 5.6574e-02 weaklyHypometh 0.701293 0.545956 0.0573017 6 0.756672 0.740498 0.016174 8.7528e-02 7.7790e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3304e-01 0.7115494 insignificant 1.0000e+00 1.0000 insignificant 0.0025353 9.4455e-01 insignificant 1.000000 insignificant 0.774453 0.545956 0.1420874 6 0.856418 0.74050 0.11591930 7.5428e-05 9.9883e-01 weaklyHypermeth 0.037714 1.0000e+00 weaklyHypermeth 0.00066711 9.9529e-01 weaklyHypermeth 0.33356 1.0000e+00 insignificant 0.111358 0.01236704 weaklyHypermeth 0.45804 insignificant chr1 166527190 166528190 10073 TBX19 ENSG00000143178 0.70589 270 7 0.67164 203 6 0.65611 175 7 0.746232 229 6 0.61926 63 4 0.83733 347 7 0.731349 88 6 0.676616 223 7 0.637060 197 7 0.75729 188 6 0.734349 205 7 0.53175 78 7 0.694941 301 7 0.644584 111 7 0.701560 212 7 0.12816 37 2 0.255556 19 2 0.76225 245 6 0.787699 203 6 0.68557 269 7 0.78377 76 7 0.659399 111 6 0.77694 135 7 0.569689 93 6 0.83050 64 6 0.795257 299 7 0.729739 168 6 0.675000 50 4 0.69542 168 6 0.771603 406 7 0.80171 284 7 0.72879 317 7 0.863159 146 7 0.809697 78 6 0.83753 121 3 0.800000 21 1 0.839662 201 7 0.911798 302 7 0.666296 237 6 0.795464 166 6 0.79497 258 6 0.73244 198 6 0.67225 229 6 0.589887 0.575363 0.47433 0.539280 0.478378 0.728366 0.616898 0.54702 0.51724 0.512195 0.618498 0.47037 0.548091 0.548509 0.534808 0.160857 0.366003 0.593510 0.613206 0.630052 0.732523 0.538964 0.654174 0.461140 0.62591 0.627381 0.605180 0.54250 0.588901 0.631257 0.598355 0.650103 0.626232 0.536374 0.679442 0.5283161 0.728516 0.8462583 0.505262 0.55283748 0.552348 0.543913 0.569594 2 0.615070 0.701059 -0.0408146 7 0.62694 0.737088 -0.1101463 0.9977365 0.0264876 weaklyHypometh 1 1.00000 insignificant 0.998345 0.022781 weaklyHypometh 1 1.00000 insignificant -0.0865583 0.058172 insignificant 1 insignificant 0.61524 0.774453 -0.121520 7 0.71650 0.85642 -0.139913 9.9996e-01 5.4435e-07 weaklyHypometh 1.0000e+00 0.00027218 weaklyHypometh 9.9989e-01 3.2769e-08 weaklyHypometh 1.0000e+00 1.6384e-05 weaklyHypometh -0.1953808 9.3067e-05 weaklyHypometh 8.1843e-03 weaklyHypometh 0.615238 0.545956 0.0280378 6 0.716505 0.740498 -0.023993 3.4397e-01 0.20002875 insignificant 1.0000e+00 1.00000 insignificant 6.4987e-01 0.08083432 insignificant 1.0000e+00 1.00000 insignificant -0.0840230 0.09288860 insignificant 1.000000 insignificant 0.701293 0.774453 -0.079067 7 0.75667 0.85642 -0.099745 9.9928e-01 4.0448e-05 weaklyHypometh 1.0000e+00 0.010919 weaklyHypometh 9.9801e-01 0.00006868 weaklyHypometh 1.0000e+00 0.027794 weaklyHypometh -0.108823 1.0183e-03 weaklyHypometh 5.6574e-02 weaklyHypometh 0.701293 0.545956 0.0573017 6 0.756672 0.740498 0.016174 8.7528e-02 7.7790e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3304e-01 0.7115494 insignificant 1.0000e+00 1.0000 insignificant 0.0025353 9.4455e-01 insignificant 1.000000 insignificant 0.774453 0.545956 0.1420874 6 0.856418 0.74050 0.11591930 7.5428e-05 9.9883e-01 weaklyHypermeth 0.037714 1.0000e+00 weaklyHypermeth 0.00066711 9.9529e-01 weaklyHypermeth 0.33356 1.0000e+00 insignificant 0.111358 0.01236704 weaklyHypermeth 0.45804 insignificant chr1 173381618 173382618 10353 TNN ENSG00000120332 0.13230 213 5 0.19476 193 6 0.12645 194 6 0.030303 194 5 0.12149 150 6 0.12891 379 6 0.083954 231 6 0.067286 177 6 0.046016 314 6 0.11270 340 6 0.071485 154 6 0.12153 265 6 0.014815 275 6 0.055556 139 5 0.071251 323 6 0.11748 210 6 0.063353 199 6 0.11304 270 5 0.249277 123 5 0.15582 255 6 0.16916 87 6 0.145439 167 5 0.13042 196 6 0.069573 67 6 0.10714 78 4 0.095253 248 6 0.087374 132 6 0.063039 102 6 0.16453 151 5 0.020687 228 6 0.20193 214 6 0.15813 250 6 0.016939 228 6 0.042699 141 5 0.33333 63 1 0.068333 70 5 0.073347 78 6 0.038293 219 6 0.076087 329 6 0.027778 182 5 0.14141 173 4 0.10417 179 6 0.19692 211 5 0.072062 0.053179 0.08903 0.028571 0.078442 0.069076 0.059969 0.03987 0.02936 0.090978 0.065648 0.08960 0.013968 0.031744 0.031878 0.070215 0.031860 0.089136 0.061799 0.045211 0.099756 0.017216 0.063444 0.064082 0.05329 0.050346 0.055784 0.04820 0.068535 0.014039 0.038679 0.092206 0.020711 0.023245 0.038563 0.0397210 0.019458 0.0096385 0.038864 0.00047619 0.040000 0.037024 0.098325 4 0.063288 0.072917 0.0060104 6 0.10077 0.094061 0.0067042 0.3448037 0.8896023 insignificant 1 1.00000 insignificant 0.493886 0.813138 insignificant 1 1.00000 insignificant -0.0138342 0.490031 insignificant 1 insignificant 0.06333 0.032541 0.068305 6 0.11516 0.04477 0.070391 8.9765e-03 6.6357e-01 weaklyHypermeth 2.0401e-01 1.00000000 insignificant 5.5403e-03 6.8722e-01 weaklyHypermeth 1.5829e-01 1.0000e+00 insignificant 0.0083978 8.7220e-01 lowCoverage 1.0000e+00 lowCoverage 0.062963 0.033520 0.0055685 6 0.079446 0.096439 -0.016993 4.3040e-01 0.17878538 insignificant 1.0000e+00 1.00000 insignificant 3.7376e-01 0.57026912 insignificant 1.0000e+00 1.00000 insignificant -0.0053854 0.86949562 insignificant 1.000000 insignificant 0.072955 0.032541 0.052901 6 0.10750 0.04477 0.062729 1.6623e-01 1.8103e-01 insignificant 1.0000e+00 1.000000 insignificant 1.1354e-01 0.40171022 insignificant 1.0000e+00 1.000000 insignificant 0.022232 6.7613e-01 lowCoverage 1.0000e+00 lowCoverage 0.072214 0.033520 0.0014891 6 0.075753 0.096439 -0.020686 8.0313e-01 7.3786e-02 insignificant 1.0000e+00 1.000000 insignificant 7.0921e-01 0.5958011 insignificant 1.0000e+00 1.0000 insignificant 0.0084487 8.0315e-01 insignificant 1.000000 insignificant 0.032746 0.033551 -0.0363504 6 0.052231 0.11251 -0.06028056 4.7563e-01 1.7825e-01 insignificant 1.000000 1.0000e+00 insignificant 0.61297442 3.2972e-01 insignificant 1.00000 1.0000e+00 insignificant -0.013783 0.81249564 lowCoverage 1.00000 lowCoverage chr1 173729534 173730534 10392 ENSG00000219660 0.62315 98 3 0.47186 61 7 0.31333 39 5 0.571429 41 5 0.38810 22 1 0.56349 65 4 0.488595 93 7 0.698489 62 4 0.357675 74 4 0.58997 55 4 0.647294 95 7 0.50965 58 5 0.161487 77 5 NA 0 0 0.301401 54 3 0.56667 31 5 0.415077 69 5 0.46330 70 3 0.446032 51 5 0.49566 163 7 0.56762 19 2 0.083333 30 2 0.73349 54 5 0.533333 19 2 0.67347 31 3 0.744232 90 5 0.690476 24 2 0.150000 13 1 0.50859 49 4 0.617404 115 5 0.31118 121 7 0.60743 114 7 0.517172 63 5 0.342165 67 5 0.66667 59 2 0.259524 82 6 0.596190 27 4 0.268939 64 7 0.552093 190 5 0.566027 234 7 0.37254 165 5 0.19727 138 3 0.56954 191 7 0.413639 0.374188 0.23631 0.320238 0.209821 0.337798 0.288791 0.50232 0.32724 0.368108 0.551473 0.40789 0.117170 NA 0.292767 0.445153 0.287925 0.154404 0.239371 0.261877 0.581633 0.111607 0.603414 0.383929 0.43878 0.563694 0.419643 0.24746 0.404361 0.445082 0.124589 0.444834 0.343933 0.294140 NA 0.1205357 0.425573 0.0706169 0.381044 0.35171008 0.088238 0.108275 0.420951 0 0.418623 0.472754 -0.0635504 5 0.51444 0.570067 -0.0556224 0.9694176 0.0321667 weaklyHypometh 1 1.00000 insignificant 0.994457 0.060865 insignificant 1 1.00000 insignificant -0.0408703 0.572339 lowCoverage 1 lowCoverage 0.41862 0.439227 0.076710 4 0.51444 0.44931 0.065137 6.5155e-02 9.1513e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.8771e-02 9.9565e-01 lowCoverage 4.4693e-01 1.0000e+00 lowCoverage 0.0357325 6.5989e-01 lowCoverage 1.0000e+00 lowCoverage 0.418623 0.495643 0.0350260 3 0.514444 0.498843 0.015601 3.0232e-01 0.76547861 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.5609e-02 0.98717028 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0260145 0.75608471 lowCoverage 1.000000 lowCoverage 0.472754 0.439227 0.141320 4 0.57007 0.44931 0.120759 3.7682e-03 9.7376e-01 lowCoverage 8.9720e-02 1.000000 lowCoverage 5.5220e-03 0.99960075 lowCoverage 1.8407e-01 1.000000 lowCoverage 0.076603 4.3910e-01 lowCoverage 1.0000e+00 lowCoverage 0.472754 0.495643 0.1169948 3 0.570067 0.498843 0.071224 1.0848e-02 9.6587e-01 lowCoverage 8.3443e-01 1.000000 lowCoverage 3.2813e-03 0.9998281 lowCoverage 6.5627e-01 1.0000 lowCoverage 0.0668848 5.0758e-01 lowCoverage 1.000000 lowCoverage 0.439227 0.495643 -0.0351740 4 0.449307 0.49884 -0.04953582 7.0938e-01 2.3950e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.84169487 3.1558e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.009718 0.92658150 lowCoverage 1.00000 lowCoverage chr1 173971283 173972283 10439 ENSG00000219660 0.86290 169 7 0.67755 149 7 0.74156 70 7 0.888981 135 7 0.81878 46 6 0.84568 307 7 0.668291 84 7 0.783931 138 7 0.803086 49 4 0.82674 82 7 0.874323 208 7 0.73077 32 2 0.918855 125 7 0.744898 40 5 0.849660 111 7 0.88736 27 2 0.817460 20 2 0.87901 137 7 0.894522 156 7 0.85578 224 7 0.89688 55 4 0.866863 73 7 0.72856 86 6 0.826531 65 6 0.95556 45 5 0.845305 210 7 0.789808 70 6 0.653680 34 2 0.75838 157 7 0.747141 157 7 0.82304 207 7 0.68948 304 7 0.719251 149 7 0.635839 95 7 0.88410 139 7 0.847985 35 2 0.651961 61 4 0.783795 188 7 0.945134 122 7 0.866061 168 7 0.90707 118 7 0.89639 106 7 0.91193 137 7 0.885236 0.725931 0.70794 0.896286 0.783059 0.868587 0.743792 0.87332 0.77038 0.842356 0.841649 0.74698 0.871911 0.809132 0.860769 0.853243 0.792233 0.905793 0.922235 0.888802 0.897869 0.848822 0.757625 0.768132 0.93675 0.843891 0.826998 0.77920 0.808754 0.787823 0.837852 0.874789 0.748179 0.602387 0.870777 0.8533531 0.722587 0.8179588 0.931235 0.88716082 0.931177 0.914699 0.932601 2 0.849653 0.847573 0.0058593 7 0.81529 0.703232 0.1120554 0.1563410 0.9191489 insignificant 1 1.00000 insignificant 0.321829 0.879619 insignificant 1 1.00000 insignificant 0.0200720 0.512410 insignificant 1 insignificant 0.85035 0.766117 0.086419 7 0.83394 0.76695 0.066988 1.6681e-04 9.9471e-01 weaklyHypermeth 4.7659e-03 1.00000000 weaklyHypermeth 1.2618e-02 9.7887e-01 weaklyHypermeth 3.2353e-01 1.0000e+00 insignificant 0.0646840 1.9439e-01 insignificant 1.0000e+00 insignificant 0.850349 0.915515 -0.0645995 7 0.833941 0.902752 -0.068811 9.9960e-01 0.00089809 weaklyHypometh 1.0000e+00 0.22452 insignificant 9.9896e-01 0.00013324 weaklyHypometh 1.0000e+00 0.13324 insignificant -0.0868098 0.00055292 weaklyHypometh 0.078989 weaklyHypometh 0.849212 0.766117 0.086320 7 0.83273 0.76695 0.065774 3.4377e-03 9.9446e-01 weaklyHypermeth 8.9720e-02 1.000000 weaklyHypermeth 3.8589e-02 0.98875313 weaklyHypermeth 8.5950e-01 1.000000 insignificant 0.044612 3.8503e-01 insignificant 1.0000e+00 insignificant 0.849212 0.915515 -0.0696027 7 0.832727 0.902752 -0.070025 9.9981e-01 3.7020e-04 weaklyHypometh 1.0000e+00 0.185100 insignificant 9.9516e-01 0.0011811 weaklyHypometh 1.0000e+00 0.9266 insignificant -0.1068818 1.9193e-03 weaklyHypometh 0.639782 insignificant 0.766117 0.915515 -0.1539735 7 0.766953 0.90275 -0.13579847 1.0000e+00 4.6919e-06 weaklyHypometh 1.000000 3.6091e-04 weaklyHypometh 0.99999921 1.2226e-04 weaklyHypometh 1.00000 1.1919e-02 weaklyHypometh -0.151494 0.01358200 weaklyHypometh 0.48507 insignificant chr1 175264650 175265650 10547 MIR488 ENSG00000202609 0.97629 144 5 0.92700 101 4 0.80000 23 4 0.917971 100 5 1.00000 1 0 0.91556 168 5 1.000000 24 4 0.916013 79 5 0.870536 31 4 1.00000 37 4 0.910417 134 5 1.00000 1 0 0.963769 140 5 NA 0 0 0.860606 47 4 0.91667 11 0 1.000000 13 0 0.92800 105 5 0.963333 45 4 0.94906 113 5 0.46667 15 0 0.913095 32 5 0.98000 44 4 0.871429 25 4 1.00000 20 0 0.971111 131 5 0.852381 51 5 1.000000 4 0 0.98347 148 4 0.993939 138 4 0.97631 107 5 0.90926 109 5 0.877778 54 5 0.940385 101 4 0.80000 137 5 0.800000 34 4 0.835000 28 4 0.954673 187 5 0.924901 115 5 0.953846 160 4 0.94000 82 4 0.97115 100 4 0.98947 87 5 0.970350 0.907946 1.00000 0.949664 NA 0.907815 1.000000 0.95868 0.87149 1.000000 0.929129 NA 0.953780 NA 0.909091 0.910714 1.000000 0.903571 0.950893 0.970037 0.333333 0.883610 0.980357 0.827806 1.00000 0.991071 0.955357 0.96548 0.979898 0.991883 0.971016 0.904201 0.955357 0.941841 1.000000 1.0000000 0.912946 0.9426162 0.904916 0.94551282 0.919643 0.969093 0.985902 0 0.936978 0.950243 -0.0136127 4 0.93027 0.943111 -0.0128411 0.9125768 0.2792572 lowCoverage 1 1.00000 lowCoverage 0.942004 0.226983 lowCoverage 1 1.00000 lowCoverage 0.0278379 0.544514 lowCoverage 1 lowCoverage 0.93698 0.916821 0.017935 4 0.93027 0.84896 0.081313 1.3066e-01 2.2529e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 3.5837e-01 4.9723e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0696704 5.5510e-02 lowCoverage 1.0000e+00 lowCoverage 0.936978 0.946691 -0.0103535 4 0.930270 0.955729 -0.025460 8.0451e-01 0.21353003 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.7973e-01 0.29709862 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0182320 0.29997679 lowCoverage 1.000000 lowCoverage 0.950243 0.916821 0.034764 5 0.94311 0.84896 0.094154 6.9323e-02 7.8496e-01 insignificant 1.0000e+00 1.000000 insignificant 1.9170e-01 0.68032781 insignificant 1.0000e+00 1.000000 insignificant 0.041833 4.2527e-01 lowCoverage 1.0000e+00 lowCoverage 0.950243 0.946691 0.0033629 4 0.943111 0.955729 -0.012619 6.1669e-01 5.6452e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.3825e-01 0.6484304 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.0460699 3.1907e-01 lowCoverage 1.000000 lowCoverage 0.916821 0.946691 -0.0149951 4 0.848957 0.95573 -0.10677272 3.6851e-01 2.4386e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.51633053 3.5968e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.087902 0.02372245 lowCoverage 0.71886 lowCoverage chr1 175465644 175466644 10593 ENSG00000222749 0.85952 54 3 0.94091 73 5 0.72247 44 4 0.934118 56 3 0.93750 13 1 0.72808 166 4 0.709524 36 1 0.890101 78 5 0.864286 28 3 0.88209 56 5 0.907429 180 5 0.37500 8 0 0.722056 85 5 0.550000 30 3 0.676135 52 4 0.66667 3 0 0.750000 10 0 0.74909 81 3 0.779978 96 5 0.89071 74 3 0.72476 67 4 0.655556 22 1 0.97778 28 4 0.563776 27 3 0.68000 15 1 0.650672 142 5 0.498677 45 3 0.431818 15 1 0.85587 103 5 0.901684 136 5 0.88547 129 5 0.81804 109 5 0.827550 66 5 0.709707 94 5 1.00000 1 0 1.000000 22 2 0.721356 59 4 0.971410 87 5 0.600901 56 3 0.753095 70 5 0.74926 64 3 0.85614 47 1 0.52165 44 3 0.870491 0.947658 0.76081 0.893939 0.957953 0.784576 0.783333 0.84998 0.90584 0.880324 0.931470 0.59091 0.970121 0.897492 0.717318 0.717333 0.958521 0.753184 0.877572 0.902597 0.922169 0.935354 0.983165 0.613095 0.93333 0.903889 0.637326 0.54719 0.874113 0.879617 0.846765 0.857584 0.676586 0.676324 NA 1.0000000 0.856920 0.9595337 0.603331 0.77904040 0.704095 0.821372 0.696232 0 0.874898 0.854415 0.0198844 4 0.64398 0.544691 0.0992901 0.1033644 0.9871143 lowCoverage 1 1.00000 lowCoverage 0.144700 0.929300 lowCoverage 1 1.00000 lowCoverage 0.0564420 0.349927 lowCoverage 1 lowCoverage 0.87633 0.808511 0.060288 4 0.73598 0.77620 -0.040223 2.1660e-01 5.3637e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.8282e-01 2.4323e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0948871 1.7684e-01 lowCoverage 1.0000e+00 lowCoverage 0.882158 0.782918 0.1369581 3 0.735264 0.590836 0.144429 1.9305e-05 0.99992139 lowCoverage 4.8264e-03 1.00000 lowCoverage 4.6597e-02 0.99756968 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0805760 0.27602589 lowCoverage 1.000000 lowCoverage 0.855436 0.808511 0.042989 5 0.62250 0.77620 -0.153697 4.3433e-01 6.8586e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9024e-01 0.04742884 inconclusive 1.0000e+00 1.000000 insignificant -0.151329 6.4419e-02 lowCoverage 1.0000e+00 lowCoverage 0.864734 0.782918 0.1185517 3 0.726254 0.590836 0.135419 1.0494e-04 9.9461e-01 lowCoverage 2.0987e-02 1.000000 lowCoverage 1.9807e-01 0.9558415 lowCoverage 1.0000e+00 1.0000 lowCoverage 0.0241340 7.6192e-01 lowCoverage 1.000000 lowCoverage 0.814241 0.785714 0.0983887 3 0.836681 0.70900 0.12767870 2.8318e-02 9.7806e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.03461966 9.9227e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.175463 0.06130842 lowCoverage 1.00000 lowCoverage chr1 175868765 175869765 10652 ENSG00000222749 0.81307 230 5 0.58386 49 5 0.54807 89 5 0.824091 51 5 0.91111 40 4 0.75321 147 5 0.763137 77 5 0.654017 52 5 0.754545 59 5 0.69470 98 5 0.672414 141 5 0.63222 51 5 0.691127 80 5 NA 0 0 0.635714 44 5 0.82667 46 5 0.596537 103 5 0.76206 104 5 0.505147 75 5 0.77631 132 5 0.45000 18 0 0.742684 46 5 0.56577 54 5 0.802857 34 5 0.87111 41 5 0.627350 67 5 0.671429 33 5 0.723810 29 4 0.70846 49 5 0.814286 57 5 0.60240 56 5 0.64150 206 5 0.766275 77 5 0.823636 51 5 0.76373 110 5 0.938095 34 5 0.725000 30 4 0.953333 41 5 0.864240 228 5 0.736467 184 5 0.77995 131 5 0.79369 190 5 0.86605 147 5 0.821002 0.587968 0.54572 0.829470 0.910964 0.749319 0.760654 0.65649 0.75946 0.696791 0.679713 0.62623 0.698757 NA 0.629376 0.830022 0.604326 0.757708 0.516508 0.778382 0.448675 0.755965 0.578255 0.809524 0.87417 0.636370 0.683223 0.71334 0.710689 0.829044 0.598777 0.646379 0.793533 0.818904 0.773223 0.9432356 0.718709 0.9558499 0.866066 0.73577373 0.783005 0.797321 0.868705 4 0.715827 0.675362 0.0408817 5 0.71408 0.676175 0.0379029 0.0338168 0.9039900 weaklyHypermeth 1 1.00000 insignificant 0.159667 0.715633 insignificant 1 1.00000 insignificant 0.0200204 0.637223 lowCoverage 1 lowCoverage 0.71583 0.827988 -0.111586 5 0.71408 0.82661 -0.112533 9.9579e-01 6.2093e-06 weaklyHypometh 1.0000e+00 0.00155232 weaklyHypometh 9.9991e-01 4.1470e-05 weaklyHypometh 1.0000e+00 1.0368e-02 weaklyHypometh -0.1231856 2.5508e-02 lowCoverage 6.7126e-01 lowCoverage 0.715827 0.811364 -0.0955675 5 0.714078 0.809827 -0.095749 9.9998e-01 0.00157771 weaklyHypometh 1.0000e+00 0.31554 insignificant 9.9999e-01 0.00128993 weaklyHypometh 1.0000e+00 0.25658 insignificant -0.1029216 0.01192296 lowCoverage 0.917151 lowCoverage 0.675362 0.827988 -0.148466 5 0.67617 0.82661 -0.150436 9.9999e-01 2.6452e-05 weaklyHypometh 1.0000e+00 0.010919 weaklyHypometh 9.9996e-01 0.00077584 weaklyHypometh 1.0000e+00 0.193959 insignificant -0.143206 1.7224e-02 lowCoverage 4.6789e-01 lowCoverage 0.675362 0.811364 -0.1364081 5 0.676175 0.809827 -0.133652 9.9999e-01 4.6118e-05 weaklyHypometh 1.0000e+00 0.046118 weaklyHypometh 9.9977e-01 0.0018532 weaklyHypometh 1.0000e+00 0.9266 insignificant -0.1229420 1.1137e-02 lowCoverage 1.000000 lowCoverage 0.827988 0.811364 0.0161003 5 0.826611 0.80983 0.01678387 1.2298e-01 7.9150e-01 insignificant 1.000000 1.0000e+00 insignificant 0.05412270 9.8407e-01 insignificant 1.00000 1.0000e+00 insignificant 0.020264 0.67537089 lowCoverage 1.00000 lowCoverage chr1 178017493 178018493 10785 FAM163A ENSG00000143340 0.91622 331 7 0.80837 242 10 0.80089 108 6 0.958813 286 7 0.87986 68 5 0.86156 434 9 0.717857 62 4 0.928118 275 9 0.783217 75 7 0.81688 113 10 0.870486 266 10 0.79940 38 4 0.941329 294 10 0.710404 102 7 0.829710 129 10 0.77167 57 6 0.744792 32 3 0.85191 680 7 0.898050 286 10 0.90159 181 7 0.72024 46 6 0.594089 67 7 0.88308 97 8 0.778205 67 7 0.91889 245 8 0.957701 325 10 0.753407 164 9 0.883838 51 3 0.83408 261 10 0.950710 238 9 0.98207 246 10 0.91045 245 8 0.218455 251 7 0.264571 261 7 0.46907 240 5 0.310419 111 7 0.250996 162 9 0.457814 353 10 0.646898 171 8 0.701705 253 9 0.69065 178 7 0.30532 182 7 0.78775 191 7 0.900399 0.781030 0.78168 0.956649 0.928644 0.843155 0.818311 0.91231 0.81130 0.825487 0.896273 0.84759 0.957137 0.774804 0.866858 0.827679 0.835545 0.845068 0.911235 0.899172 0.746445 0.774918 0.837637 0.831807 0.91316 0.951415 0.828309 0.90179 0.838255 0.943498 0.976960 0.900288 0.136300 0.140123 0.242541 0.3780292 0.255566 0.3474431 0.689326 0.66933470 0.675751 0.394147 0.787774 3 0.882483 0.909180 -0.0268085 10 0.87062 0.854237 0.0163857 0.7115079 0.0039569 weaklyHypometh 1 0.65949 insignificant 0.790191 0.002911 weaklyHypometh 1 0.97033 insignificant -0.0076728 0.838900 insignificant 1 insignificant 0.88248 0.339623 0.557047 10 0.87062 0.30916 0.561461 5.1846e-70 1.0000e+00 hypermethylated 5.1846e-67 1.00000000 hypermethylated 4.8632e-16 1.0000e+00 hypermethylated 2.4316e-13 1.0000e+00 hypermethylated 0.5110029 2.3424e-05 hypermethylated 3.9040e-03 hypermethylated 0.882338 0.687179 0.1997280 7 0.857685 0.703567 0.154117 1.5764e-16 0.99956202 weaklyHypermeth 5.2547e-14 1.00000 weaklyHypermeth 5.4986e-09 0.99848603 weaklyHypermeth 2.7493e-06 1.00000 weaklyHypermeth 0.2130927 0.06192647 insignificant 1.000000 insignificant 0.909180 0.339623 0.565413 10 0.85424 0.30916 0.545075 3.1972e-47 1.0000e+00 hypermethylated 3.1972e-44 1.000000 hypermethylated 3.7639e-14 1.00000000 hypermethylated 3.7639e-11 1.000000 hypermethylated 0.518676 1.7838e-06 hypermethylated 3.5677e-04 hypermethylated 0.909580 0.687179 0.2213222 7 0.889660 0.703567 0.186093 5.6989e-14 9.9984e-01 hypermethylated 2.8494e-11 1.000000 hypermethylated 2.9273e-08 0.9999959 hypermethylated 1.4636e-05 1.0000 hypermethylated 0.2207655 5.4471e-02 insignificant 1.000000 insignificant 0.339869 0.687179 -0.3949809 7 0.340077 0.70357 -0.36348974 1.0000e+00 8.6564e-14 hypomethylated 1.000000 1.7313e-11 hypomethylated 0.99999766 1.4955e-07 hypomethylated 1.00000 4.9851e-05 hypomethylated -0.297910 0.01898978 weaklyHypometh 0.63299 insignificant chr1 178418002 178419002 10791 QSOX1 ENSG00000116260 0.94991 348 6 0.93503 437 9 0.96743 263 6 0.962284 277 6 0.88257 201 9 0.97014 780 6 0.936903 292 9 0.926954 266 6 0.946137 263 6 0.97946 219 6 0.958778 387 9 0.97395 72 4 0.947061 281 6 0.986883 136 6 0.940499 256 6 0.97727 58 3 0.947222 34 4 0.80375 338 6 0.971494 359 6 0.92565 354 6 0.93431 101 8 0.957418 134 6 0.96584 267 9 0.956946 171 6 0.99537 92 4 0.962091 513 9 0.912563 273 8 0.727511 205 6 0.93760 337 6 0.965149 588 9 0.98249 551 6 0.96508 394 6 0.963110 315 6 0.943584 221 6 1.00000 137 3 0.473291 72 4 0.887032 240 7 0.577121 541 6 0.756916 400 6 0.948270 347 6 0.96212 350 6 0.83097 377 6 0.87449 343 6 0.929113 0.927633 0.93904 0.940573 0.929808 0.953739 0.890349 0.91825 0.91784 0.960760 0.940414 0.95603 0.933167 0.974543 0.941545 0.976119 0.939334 0.915909 0.954146 0.929877 0.937806 0.912842 0.929386 0.930817 0.98456 0.954507 0.891918 0.96856 0.948933 0.963417 0.976873 0.940688 0.948075 0.915099 0.946618 0.4601743 0.954108 0.4934817 0.855916 0.91535059 0.955108 0.954698 0.839725 6 0.938601 0.950910 -0.0115287 6 0.94022 0.952977 -0.0127535 0.9819120 0.1187000 insignificant 1 1.00000 insignificant 0.864900 0.480613 insignificant 1 1.00000 insignificant 0.0059374 0.792349 insignificant 1 insignificant 0.93860 0.792267 0.148196 6 0.94022 0.81039 0.129831 2.9855e-09 1.0000e+00 weaklyHypermeth 1.4217e-07 1.00000000 weaklyHypermeth 1.0840e-01 9.7426e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1371118 1.9481e-01 insignificant 1.0000e+00 insignificant 0.938601 0.898184 0.0359326 6 0.940224 0.899989 0.040234 1.2860e-02 0.95987619 weaklyHypermeth 8.5731e-01 1.00000 insignificant 4.9283e-02 0.99199483 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0699148 0.14032416 insignificant 1.000000 insignificant 0.950910 0.792267 0.158409 6 0.95298 0.81039 0.142585 1.0552e-06 1.0000e+00 weaklyHypermeth 4.7964e-05 1.000000 weaklyHypermeth 8.2111e-02 0.99093016 insignificant 1.0000e+00 1.000000 insignificant 0.131174 2.1519e-01 insignificant 1.0000e+00 insignificant 0.950910 0.898184 0.0472606 6 0.952977 0.899989 0.052988 4.5344e-03 9.8931e-01 weaklyHypermeth 5.0382e-01 1.000000 insignificant 3.8282e-02 0.9824492 weaklyHypermeth 1.0000e+00 1.0000 insignificant 0.0639774 1.8442e-01 insignificant 1.000000 insignificant 0.792267 0.898184 -0.1175606 6 0.810392 0.89999 -0.08959691 9.9361e-01 3.1889e-02 weaklyHypometh 1.000000 8.1767e-01 insignificant 0.89450385 7.3690e-01 insignificant 1.00000 1.0000e+00 insignificant -0.067197 0.52036200 insignificant 1.00000 insignificant chr1 179161879 179162879 10848 KIAA1614 ENSG00000135835 0.73622 199 6 0.73709 280 6 0.85352 242 6 0.710648 44 6 0.84016 120 6 0.82531 304 6 0.816571 277 6 0.826426 263 6 0.855925 261 6 0.85539 179 6 0.845203 297 6 0.78767 174 6 0.745064 342 6 NA 0 0 0.701817 214 6 0.76526 119 6 0.710727 110 6 0.55971 84 6 0.866732 205 6 0.68934 150 6 0.83321 63 6 0.201852 43 6 0.70697 220 6 0.724790 76 6 0.59722 23 0 0.868104 320 6 0.808316 84 6 0.885913 70 6 0.78260 232 6 0.838784 392 6 0.81524 322 6 0.90785 310 6 0.128964 315 6 0.146151 258 6 0.25000 194 6 0.009804 97 6 0.168074 66 6 0.113063 373 6 0.085465 197 6 0.168067 229 6 0.22807 102 6 0.18451 174 6 0.40000 45 6 0.727150 0.727720 0.84092 0.711349 0.832876 0.811471 0.810768 0.81383 0.85060 0.843632 0.842321 0.77834 0.732255 NA 0.689143 0.773453 0.698980 0.540564 0.853482 0.680459 0.837798 0.191073 0.700913 0.710695 0.59188 0.859557 0.792629 0.87932 0.771808 0.826247 0.804904 0.904026 0.125490 0.138350 0.235043 0.0093012 0.158953 0.1036221 0.079064 0.16037939 0.211081 0.174671 0.392877 6 0.787008 0.802784 -0.0172430 6 0.78826 0.804031 -0.0157750 0.8778002 0.1015130 insignificant 1 1.00000 insignificant 0.945475 0.230956 insignificant 1 1.00000 insignificant 0.0276288 0.644217 insignificant 1 insignificant 0.78701 0.137375 0.650250 6 0.78826 0.13633 0.651924 7.3154e-60 1.0000e+00 hypermethylated 3.6577e-57 1.00000000 hypermethylated 1.0165e-16 1.0000e+00 hypermethylated 1.0165e-13 1.0000e+00 hypermethylated 0.6391905 5.5837e-08 hypermethylated 1.3959e-05 hypermethylated 0.787008 0.172691 0.6193071 6 0.788256 0.171639 0.616616 7.5347e-58 1.00000000 hypermethylated 7.5347e-55 1.00000 hypermethylated 2.3587e-14 1.00000000 hypermethylated 2.3587e-11 1.00000 hypermethylated 0.5619774 0.00015103 hypermethylated 0.035663 hypermethylated 0.802784 0.137375 0.666403 6 0.80403 0.13633 0.667699 4.8814e-37 1.0000e+00 hypermethylated 2.4407e-34 1.000000 hypermethylated 4.2777e-12 1.00000000 hypermethylated 2.1388e-09 1.000000 hypermethylated 0.611562 6.1659e-08 hypermethylated 2.0553e-05 hypermethylated 0.802784 0.172691 0.6337890 6 0.804031 0.171639 0.632391 1.0815e-35 1.0000e+00 hypermethylated 1.0815e-32 1.000000 hypermethylated 8.9557e-11 1.0000000 hypermethylated 8.9557e-08 1.0000 hypermethylated 0.5343486 1.1639e-05 hypermethylated 0.011639 hypermethylated 0.137375 0.172691 -0.0344613 6 0.136331 0.17164 -0.03530829 9.0825e-01 5.0479e-02 insignificant 1.000000 1.0000e+00 insignificant 0.99863715 5.0706e-03 weaklyHypometh 1.00000 2.0282e-01 insignificant -0.077213 0.24803432 insignificant 1.00000 insignificant chr1 179364069 179365069 10860 IER5 ENSG00000162783 0.21281 339 6 0.29682 152 6 0.42958 106 6 0.313814 239 6 0.26389 47 2 0.51121 476 6 0.412195 101 6 0.313189 132 6 0.304735 123 6 0.23098 105 6 0.443798 198 6 0.46925 94 6 0.055690 205 6 NA 0 0 0.146148 180 6 0.28736 58 4 0.149485 118 6 0.39300 350 6 0.094478 150 6 0.17682 326 6 0.38223 77 5 0.157625 266 6 0.44146 113 6 0.354001 110 6 0.30057 146 6 0.140556 281 6 0.296777 140 6 0.726768 47 4 0.24862 135 6 0.277763 261 6 0.16796 256 6 0.45239 301 6 0.222796 185 6 0.080952 135 6 0.40000 106 4 0.126882 139 6 0.370701 65 6 0.140731 188 6 0.092812 471 6 0.253680 356 6 0.10024 324 6 0.27224 345 6 0.15335 407 6 0.162122 0.196608 0.37802 0.252206 0.295430 0.457369 0.370384 0.26780 0.28027 0.202527 0.384697 0.44892 0.062591 NA 0.110647 0.398086 0.128223 0.317796 0.066996 0.119500 0.360455 0.130924 0.440780 0.272160 0.23504 0.111644 0.289023 0.64758 0.208133 0.198445 0.134866 0.404324 0.170414 0.085668 0.222966 0.1124807 0.332200 0.1195252 0.071999 0.21960760 0.075162 0.211967 0.143329 4 0.264361 0.256915 0.0139540 6 0.30614 0.286917 0.0192259 0.3914992 0.8722590 insignificant 1 1.00000 insignificant 0.675061 0.310967 insignificant 1 1.00000 insignificant -0.0391430 0.490661 insignificant 1 insignificant 0.26436 0.155257 0.128299 6 0.30614 0.16595 0.140198 6.2042e-06 9.8857e-01 weaklyHypermeth 2.2512e-04 1.00000000 weaklyHypermeth 2.7892e-04 9.9002e-01 weaklyHypermeth 1.1157e-02 1.0000e+00 weaklyHypermeth 0.0660736 3.1863e-01 insignificant 1.0000e+00 insignificant 0.264361 0.143458 0.1208749 6 0.306143 0.166709 0.139434 5.5512e-05 0.99960966 weaklyHypermeth 9.2519e-03 1.00000 weaklyHypermeth 7.2856e-04 0.99990110 weaklyHypermeth 1.4571e-01 1.00000 insignificant 0.1152847 0.03831895 weaklyHypermeth 1.000000 insignificant 0.256915 0.155257 0.112417 6 0.28692 0.16595 0.120972 2.0616e-04 9.3019e-01 weaklyHypermeth 7.1091e-03 1.000000 weaklyHypermeth 6.6848e-04 0.98995300 weaklyHypermeth 3.0385e-02 1.000000 weaklyHypermeth 0.105217 1.6935e-01 insignificant 1.0000e+00 insignificant 0.256915 0.143458 0.1059084 6 0.286917 0.166709 0.120208 1.0511e-03 9.9116e-01 weaklyHypermeth 1.3139e-01 1.000000 insignificant 3.3747e-04 0.9990038 weaklyHypermeth 8.4367e-02 1.0000 weaklyHypermeth 0.1544277 2.2645e-02 weaklyHypermeth 1.000000 insignificant 0.155257 0.143458 -0.0019190 6 0.165945 0.16671 -0.00076372 8.3503e-01 5.3153e-01 insignificant 1.000000 1.0000e+00 insignificant 0.81258769 5.4275e-01 insignificant 1.00000 1.0000e+00 insignificant 0.049211 0.47818475 insignificant 1.00000 insignificant chr1 180625052 180626052 10943 ENSG00000198747 0.35911 199 6 0.33433 146 7 0.38802 145 7 0.267211 160 6 0.36408 153 7 0.24606 326 6 0.368287 178 7 0.388334 133 6 0.435771 149 7 0.27841 119 6 0.629687 241 7 0.40697 87 7 0.462620 196 6 0.377348 67 4 0.423584 141 7 0.46122 104 6 0.417085 107 6 0.35732 199 9 0.414617 193 7 0.34775 196 6 0.50813 107 5 0.307234 97 6 0.33158 206 6 0.434500 88 5 0.21984 79 6 0.380129 178 6 0.195622 147 7 0.244805 114 7 0.40606 172 6 0.338551 172 6 0.42883 176 6 0.38663 255 6 0.301732 142 6 0.367568 126 6 0.24705 100 6 0.277778 39 5 0.398230 144 9 0.404230 185 5 0.313516 261 6 0.247688 204 6 0.40535 208 6 0.40412 168 6 0.43326 241 6 0.435111 0.393350 0.42724 0.396908 0.431755 0.395141 0.426031 0.46536 0.41334 0.413040 0.531409 0.38051 0.551489 0.363431 0.443254 0.449564 0.487885 0.450452 0.491957 0.384607 0.631321 0.324228 0.418212 0.496152 0.34275 0.448711 0.305071 0.42751 0.383367 0.353270 0.367896 0.444269 0.400721 0.361892 0.362412 0.3822092 0.559518 0.4476706 0.387775 0.40998287 0.410597 0.497320 0.468193 5 0.433869 0.405375 0.0363663 6 0.39651 0.328548 0.0679640 0.0057637 0.9817878 weaklyHypermeth 1 1.00000 insignificant 0.060138 0.964746 insignificant 1 1.00000 insignificant 0.0378976 0.261993 insignificant 1 insignificant 0.43400 0.426431 0.021933 6 0.43616 0.32616 0.110006 7.8886e-04 8.5710e-01 weaklyHypermeth 2.0759e-02 1.00000000 weaklyHypermeth 1.0613e-02 9.7189e-01 weaklyHypermeth 2.8684e-01 1.0000e+00 insignificant 0.0536255 1.3181e-01 insignificant 1.0000e+00 insignificant 0.435585 0.410731 0.0138974 6 0.415574 0.339627 0.075947 4.7918e-02 0.73992855 weaklyHypermeth 1.0000e+00 1.00000 insignificant 4.8650e-02 0.41994305 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0256040 0.53742568 insignificant 1.000000 insignificant 0.405481 0.425272 -0.017577 6 0.31506 0.27180 0.043260 5.5393e-01 6.7313e-01 insignificant 1.0000e+00 1.000000 insignificant 4.6343e-01 0.85818196 insignificant 1.0000e+00 1.000000 insignificant 0.015728 6.8820e-01 insignificant 1.0000e+00 insignificant 0.409117 0.411275 -0.0209819 6 0.314229 0.413001 -0.098772 6.2220e-01 6.7548e-01 insignificant 1.0000e+00 1.000000 insignificant 4.8802e-01 0.5614843 insignificant 1.0000e+00 1.0000 insignificant -0.0122936 7.8681e-01 insignificant 1.000000 insignificant 0.427184 0.411275 -0.0039118 6 0.283032 0.41300 -0.12996952 8.5716e-01 1.5289e-01 insignificant 1.000000 1.0000e+00 insignificant 0.94091652 3.7836e-01 insignificant 1.00000 1.0000e+00 insignificant -0.028021 0.54230527 insignificant 1.00000 insignificant chr1 185532217 185533217 11087 PLA2G4A ENSG00000116711 0.630952 74 5 0.643099 87 5 0.68056 41 5 0.742982 99 5 0.514286 31 5 0.68965 159 5 0.595238 40 5 0.612206 87 5 0.762500 24 1 0.833333 33 5 0.66714 150 5 1.000000 7 0 0.753922 82 5 0.791111 29 5 0.711111 39 5 0.70000 18 0 0.500000 8 0 0.787879 69 5 0.818182 65 5 0.587660 164 5 0.58929 17 1 0.6659341 59 5 0.76311 67 5 0.62143 39 5 0.800909 44 4 0.518254 102 5 0.49143 41 5 0.628571 22 1 0.73918 61 5 0.757194 67 5 0.631273 89 5 0.692281 174 5 0.51022 85 5 0.60637 71 5 0.78533 121 5 0.933333 13 0 0.55476 36 4 0.545567 113 5 0.6540793 65 5 0.616667 76 5 0.696035 118 5 0.563889 41 5 0.749342 95 5 0.695274 0.68314 0.69797 0.699686 0.524520 0.718453 0.637882 0.645841 0.771455 0.863184 0.68542 1.00000 0.738294 0.748922 0.655721 0.75373 0.598761 0.785165 0.834464 0.702556 0.46082 0.674594 0.75043 0.663646 0.836567 0.655508 0.57058 0.63113 0.72193 0.730597 0.613731 0.70801 0.596420 0.587321 0.710469 0.945274 0.519367 0.616548 0.6861845 0.640547 0.703344 0.542496 0.760654 0 0.700613 0.680307 0.01972886 5 0.65282 0.673534 -0.0207136 2.4239e-01 0.743214 insignificant 1.000000 1 insignificant 0.1018425 0.942641 insignificant 1 1 insignificant 0.0428535 0.274805 lowCoverage 1 lowCoverage 0.700613 0.65604 0.0473876 5 0.652820 0.61874 0.034079 4.4536e-03 6.9411e-01 weaklyHypermeth 1.7129e-01 1.0000e+00 insignificant 1.4184e-01 9.1692e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.045161 5.5777e-01 lowCoverage 1.00000000 lowCoverage 0.701079 0.675949 0.0199272 5 0.694513 0.674862 0.019651 4.3613e-01 0.88863883 insignificant 1.0000e+00 1.00000 insignificant 1.9805e-01 0.97853232 insignificant 1.0000e+00 1.00000 insignificant 0.045088 3.0006e-01 lowCoverage 1.000000 lowCoverage 0.680307 0.65604 0.0281236 5 0.67353 0.61874 0.054792 9.6207e-02 6.3685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2917e-01 0.73659472 insignificant 1.0000e+00 1.00000 insignificant 0.0023071 9.7597e-01 lowCoverage 1.000000 lowCoverage 0.680412 0.675949 0.00053633 5 0.677655 0.674862 0.0027923 5.9192e-01 6.7876e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.0779e-01 9.0307e-01 insignificant 1.0000000 1.000000 insignificant 0.0022346 0.9590637 lowCoverage 1.00000 lowCoverage 0.658140 0.675949 -0.019558 5 0.65665 0.674862 -0.0182087 3.8343e-01 1.6099e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6038e-01 7.9300e-01 insignificant 1.0000000 1.0000e+00 insignificant -7.2467e-05 9.9926e-01 lowCoverage 1.000000 lowCoverage chr1 185997868 185998868 11138 ENSG00000216876 0.900960 277 5 0.888252 69 5 0.93526 109 5 0.937874 120 5 0.980000 46 5 0.78368 317 5 0.892266 71 5 0.875983 70 5 0.829082 73 4 0.864180 64 5 0.74605 164 5 0.871977 83 5 0.896486 211 5 NA 0 0 0.949082 112 5 0.82667 24 3 0.868893 69 5 0.950814 165 4 0.881094 127 5 0.903300 318 5 0.61557 64 5 0.6036056 201 5 0.72608 276 5 0.56679 320 5 0.756165 108 5 0.940584 160 5 0.72375 397 5 0.914523 89 4 0.87428 58 5 0.943339 129 5 0.876464 128 5 0.767397 364 5 0.65139 90 5 0.80330 65 5 0.69107 95 5 0.739405 64 5 0.77820 203 5 0.925503 134 5 0.9270588 280 5 0.972975 292 5 0.938485 269 5 0.959816 315 5 0.917325 332 5 0.909138 0.87939 0.92866 0.953914 0.986312 0.877543 0.869927 0.872386 0.853882 0.877387 0.90100 0.85285 0.903415 NA 0.949266 0.84664 0.902045 0.941985 0.877091 0.881154 0.75614 0.757253 0.86932 0.723177 0.764821 0.933076 0.76339 0.89178 0.90032 0.946537 0.905819 0.92239 0.787548 0.773188 0.735474 0.911396 0.808263 0.933365 0.9367201 0.959379 0.941283 0.961720 0.918387 5 0.899960 0.842197 0.05914934 5 0.85261 0.766087 0.0865241 7.5774e-05 0.999377 weaklyHypermeth 0.075774 1 weaklyHypermeth 0.0040297 0.994942 weaklyHypermeth 1 1 insignificant 0.1075456 0.020519 lowCoverage 1 lowCoverage 0.899960 0.82028 0.0728776 5 0.852611 0.72531 0.127298 1.6112e-05 9.9999e-01 weaklyHypermeth 1.0070e-03 1.0000e+00 weaklyHypermeth 3.0642e-03 9.9981e-01 weaklyHypermeth 2.1887e-01 1.0000e+00 insignificant 0.118446 2.8134e-02 lowCoverage 1.00000000 lowCoverage 0.899960 0.945565 -0.0436855 5 0.852611 0.947283 -0.094672 9.9997e-01 0.00080277 weaklyHypometh 1.0000e+00 0.26759 insignificant 9.9819e-01 0.00895354 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.059874 2.2979e-03 lowCoverage 0.255322 lowCoverage 0.842197 0.82028 0.0176017 5 0.76609 0.72531 0.040774 3.4554e-01 9.2500e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2830e-01 0.94017526 insignificant 1.0000e+00 1.00000 insignificant 0.0109008 8.4657e-01 lowCoverage 1.000000 lowCoverage 0.842197 0.945565 -0.10161017 5 0.766087 0.947283 -0.1811962 1.0000e+00 3.4138e-06 weaklyHypometh 1.0000e+00 0.0034138 weaklyHypometh 9.9999e-01 5.0148e-05 weaklyHypometh 1.0000000 0.050148 weaklyHypometh -0.1674198 0.0012099 lowCoverage 0.24806 lowCoverage 0.820276 0.945565 -0.117793 5 0.72531 0.947283 -0.2219705 1.0000e+00 1.0404e-05 weaklyHypometh 1.0000e+00 1.4863e-03 weaklyHypometh 1.0000e+00 5.5013e-04 weaklyHypometh 1.0000000 1.1003e-01 insignificant -1.7832e-01 5.2972e-03 weaklyHypometh 0.410880 insignificant chr1 194729538 194730538 11485 ENSG00000219853 0.797198 265 8 0.846188 174 6 0.69809 136 7 0.853806 186 8 0.790490 122 8 0.82807 316 8 0.822944 132 8 0.808223 144 8 0.726318 115 6 0.875628 116 6 0.81730 228 8 0.789262 81 6 0.837513 172 7 0.772222 36 4 0.853289 162 8 0.88560 135 8 0.684286 78 5 0.762527 202 7 0.686376 105 6 0.891675 150 8 0.81235 64 5 0.7691494 107 6 0.64876 157 6 0.74469 77 7 0.795928 53 5 0.795922 165 8 0.75460 103 8 0.712271 49 5 0.82448 116 6 0.851526 156 6 0.889775 166 6 0.855119 240 8 0.86725 141 6 0.72705 101 8 0.70083 232 8 0.881481 28 2 0.70219 128 8 0.755344 155 8 0.8291072 355 8 0.767053 230 8 0.805513 203 8 0.856685 232 8 0.878888 217 8 0.852714 0.82720 0.76869 0.893897 0.877498 0.888405 0.877556 0.836178 0.850120 0.937160 0.88984 0.87107 0.882373 0.887356 0.887041 0.92561 0.697780 0.858063 0.798141 0.937743 0.88034 0.797275 0.79044 0.877453 0.884266 0.875250 0.79746 0.78021 0.82457 0.888127 0.911251 0.88124 0.893932 0.846928 0.846716 0.889467 0.848165 0.817714 0.9104105 0.865529 0.877447 0.878202 0.909210 5 0.867758 0.859601 0.01379998 6 0.81303 0.799232 0.0137959 1.4271e-01 0.825512 insignificant 1.000000 1 insignificant 0.1569712 0.679656 insignificant 1 1 insignificant 0.0134692 0.580464 insignificant 1 insignificant 0.867758 0.85605 0.0129640 6 0.813028 0.74659 0.066437 9.2915e-04 4.4752e-01 weaklyHypermeth 3.8714e-02 1.0000e+00 weaklyHypermeth 3.1706e-02 2.8574e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.028991 4.5008e-01 insignificant 1.00000000 insignificant 0.867758 0.905416 -0.0263778 8 0.813028 0.824709 -0.011681 6.8478e-01 0.17185946 insignificant 1.0000e+00 1.00000 insignificant 7.6911e-01 0.12351439 insignificant 1.0000e+00 1.00000 insignificant -0.026099 3.0870e-01 insignificant 1.000000 insignificant 0.859601 0.85605 0.0027769 6 0.79923 0.74659 0.052641 4.3125e-02 2.9728e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.2978e-01 0.32112376 insignificant 1.0000e+00 1.00000 insignificant 0.0155217 6.9696e-01 insignificant 1.000000 insignificant 0.859601 0.905416 -0.03409394 6 0.799232 0.824709 -0.0254772 9.6895e-01 1.0198e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8490e-01 1.5440e-01 insignificant 1.0000000 1.000000 insignificant -0.0395682 0.1764970 insignificant 1.00000 insignificant 0.856051 0.905416 -0.034590 6 0.74659 0.824709 -0.0781178 9.4181e-01 2.6849e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.7161e-01 8.6932e-02 insignificant 1.0000000 1.0000e+00 insignificant -5.5090e-02 1.9218e-01 insignificant 1.000000 insignificant chr1 199099352 199100352 11773 ENSG00000218506 0.882995 190 6 0.756932 129 6 0.49210 105 6 0.725843 187 6 0.780754 53 6 0.77339 286 6 0.714054 52 6 0.806272 114 6 0.779232 93 6 0.854779 81 6 0.86138 249 6 0.629630 28 2 0.854167 115 6 0.695437 65 6 0.786297 109 6 0.70833 20 0 0.944444 12 0 0.858407 179 6 0.658365 190 6 0.758384 188 6 0.60893 45 2 0.9227431 73 6 0.85267 104 6 0.67843 49 2 0.932341 61 6 0.827685 133 6 0.58587 129 6 0.862836 55 2 0.60986 106 6 0.830437 129 6 0.682829 123 6 0.826459 221 6 0.86235 57 6 0.80492 82 6 0.68131 285 6 0.944444 9 0 0.82356 47 3 0.823243 165 6 0.8545670 158 6 0.858844 155 6 0.884315 160 6 0.683333 79 6 0.890734 134 6 0.890817 0.78496 0.75827 0.913302 0.866695 0.839390 0.886539 0.875571 0.812558 0.891452 0.85535 0.63041 0.865602 0.799639 0.845349 0.72006 0.946208 0.822421 0.881368 0.919103 0.80479 0.931803 0.90244 0.826218 0.898403 0.852741 0.83832 0.84075 0.75294 0.806187 0.847024 0.86478 0.841317 0.813283 0.911166 0.896208 0.766191 0.882585 0.9084213 0.863840 0.930164 0.918164 0.912600 2 0.844172 0.837948 0.00399332 6 0.78149 0.773125 0.0083676 5.3568e-01 0.845115 insignificant 1.000000 1 insignificant 0.6688079 0.729024 insignificant 1 1 insignificant -0.0023647 0.956869 insignificant 1 insignificant 0.844172 0.87907 -0.0215209 6 0.781492 0.80887 -0.027375 8.9024e-01 3.4647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7630e-01 3.9887e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.057245 2.0167e-01 lowCoverage 1.00000000 lowCoverage 0.843852 0.883382 -0.0477883 6 0.726865 0.771406 -0.044540 9.9684e-01 0.03039841 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9853e-01 0.02368539 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.068299 1.6950e-01 insignificant 1.000000 insignificant 0.837948 0.87907 -0.0241558 6 0.77312 0.80887 -0.035743 9.7868e-01 2.6100e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7819e-01 0.47411401 insignificant 1.0000e+00 1.00000 insignificant -0.0548801 2.9636e-01 lowCoverage 1.000000 lowCoverage 0.837684 0.883382 -0.05162259 6 0.716406 0.771406 -0.0549998 9.9570e-01 1.5157e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9680e-01 4.4823e-02 weaklyHypometh 1.0000000 1.000000 insignificant -0.0659340 0.2392397 insignificant 1.00000 insignificant 0.879875 0.883382 -0.024046 6 0.82358 0.771406 0.0521788 8.9313e-01 4.0037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9395e-01 6.8672e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.1054e-02 8.3641e-01 lowCoverage 1.000000 lowCoverage chr1 199510721 199511721 11780 IGFN1 ENSG00000163395 0.836818 226 9 0.749550 281 10 0.84226 155 10 0.947314 196 7 0.682671 103 9 0.90613 469 10 0.702949 133 10 0.670037 217 10 0.675274 149 10 0.774273 110 8 0.82554 330 10 0.606277 57 4 0.705546 160 7 0.857730 71 5 0.863376 154 8 0.69583 46 5 0.592593 29 2 0.692371 212 8 0.724245 245 8 0.832927 226 7 0.61168 185 8 0.6675470 151 8 0.82506 203 8 0.74121 216 10 0.593042 163 9 0.784798 282 10 0.82233 219 10 0.686502 83 7 0.80980 200 7 0.713433 324 10 0.829527 299 10 0.886688 399 10 0.60256 226 10 0.54526 181 8 0.61514 283 6 0.621805 112 7 0.59453 220 12 0.529676 297 10 0.6672906 280 10 0.815774 302 8 0.854074 186 8 0.787915 189 7 0.839598 223 8 0.884695 0.66197 0.83612 0.925740 0.751316 0.898917 0.802596 0.778651 0.727264 0.839142 0.87128 0.71775 0.799260 0.839498 0.836386 0.64027 0.515332 0.739760 0.873775 0.849126 0.91734 0.822087 0.86175 0.895421 0.721999 0.850818 0.80906 0.87238 0.87156 0.867985 0.841467 0.86453 0.503699 0.461248 0.549534 0.570607 0.494864 0.445418 0.8100237 0.860868 0.840889 0.809117 0.804424 4 0.822079 0.851689 -0.03358361 10 0.64547 0.719988 -0.0745230 9.3553e-01 0.090892 insignificant 1.000000 1 insignificant 0.9218064 0.359546 insignificant 1 1 insignificant 0.0115510 0.744443 insignificant 1 insignificant 0.822902 0.49052 0.2601727 10 0.706746 0.46890 0.237850 7.9466e-12 9.9904e-01 hypermethylated 7.9466e-10 1.0000e+00 hypermethylated 2.5876e-04 9.9979e-01 hypermethylated 3.2345e-02 1.0000e+00 hypermethylated 0.174356 1.8592e-06 weaklyHypermeth 0.00037185 weaklyHypermeth 0.823596 0.844068 -0.0058467 8 0.711985 0.667539 0.044446 9.3232e-01 0.71710858 insignificant 1.0000e+00 1.00000 insignificant 9.4537e-01 0.77418291 insignificant 1.0000e+00 1.00000 insignificant -0.033745 4.2444e-01 insignificant 1.000000 insignificant 0.853721 0.49052 0.3014332 10 0.72888 0.46890 0.259979 1.8544e-14 9.9992e-01 hypermethylated 3.0906e-12 1.0000e+00 hypermethylated 7.4753e-05 0.99999643 hypermethylated 9.3441e-03 1.00000 hypermethylated 0.1628052 9.0498e-05 weaklyHypermeth 0.013625 weaklyHypermeth 0.853487 0.844068 0.02651370 8 0.713972 0.667539 0.0464334 2.8431e-01 9.6490e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.8419e-01 9.0908e-01 insignificant 1.0000000 1.000000 insignificant -0.0452958 0.3176344 insignificant 1.00000 insignificant 0.492675 0.844784 -0.285075 8 0.47787 0.715220 -0.2373528 9.9997e-01 1.0903e-07 hypomethylated 1.0000e+00 2.1806e-05 hypomethylated 9.9998e-01 8.7717e-03 weaklyHypometh 1.0000000 8.7717e-01 insignificant -2.0810e-01 1.5449e-03 weaklyHypometh 0.171659 insignificant chr1 200434714 200435714 11799 ENSG00000208212 0.839464 292 8 0.714896 341 11 0.83407 185 10 0.897920 270 8 0.713881 144 12 0.89888 611 11 0.676354 147 7 0.842620 247 12 0.805879 163 12 0.850418 200 12 0.81297 377 12 0.677917 51 2 0.911285 228 11 0.846998 163 9 0.782570 186 12 0.74479 48 2 0.508747 201 2 0.801080 379 6 0.783955 246 7 0.779507 264 6 0.77029 89 7 0.8175914 55 6 0.66815 173 6 0.88197 208 12 0.932300 196 8 0.847358 310 12 0.73438 186 10 0.655655 116 8 0.68520 250 10 0.800539 447 12 0.861383 422 12 0.904320 330 12 0.51384 224 11 0.62134 225 12 0.30854 240 6 0.238095 20 0 0.55057 237 11 0.235107 437 12 0.8341532 269 4 0.920854 296 6 0.954172 292 6 0.773164 297 6 0.884270 266 5 0.847569 0.77423 0.89377 0.887435 0.713455 0.879745 0.646221 0.781256 0.767901 0.852653 0.89331 0.71920 0.848781 0.887014 0.863741 0.77038 0.656260 0.792247 0.750433 0.823141 0.68795 0.777884 0.73316 0.850870 0.864909 0.869806 0.77378 0.69885 0.78985 0.862234 0.859112 0.92334 0.401757 0.494878 0.526997 0.237060 0.578807 0.166908 0.8495309 0.852939 0.873200 0.819015 0.798080 2 0.849041 0.849389 0.00018308 10 0.80592 0.794486 0.0114353 6.2540e-01 0.497602 insignificant 1.000000 1 insignificant 0.8996914 0.517699 insignificant 1 1 insignificant -0.0103845 0.766224 insignificant 1 insignificant 0.849041 0.50579 0.3585938 10 0.805921 0.41857 0.387347 5.4892e-35 1.0000e+00 hypermethylated 5.4892e-32 1.0000e+00 hypermethylated 1.5714e-12 1.0000e+00 hypermethylated 1.5714e-09 1.0000e+00 hypermethylated 0.374962 2.1647e-03 weaklyHypermeth 0.14431523 insignificant 0.849041 0.852817 0.0126815 6 0.805921 0.856849 -0.050928 8.8529e-01 0.00400870 inconclusive 1.0000e+00 1.00000 insignificant 9.7367e-01 0.00033273 inconclusive 1.0000e+00 0.16637 insignificant -0.087113 5.3134e-02 insignificant 1.000000 insignificant 0.849389 0.50579 0.3475051 10 0.79449 0.41857 0.375911 3.1446e-24 1.0000e+00 hypermethylated 3.1446e-21 1.0000e+00 hypermethylated 2.1597e-12 1.00000000 hypermethylated 2.1597e-09 1.00000 hypermethylated 0.3853462 1.6023e-03 weaklyHypermeth 0.114450 insignificant 0.849389 0.852817 0.00229341 6 0.794486 0.856849 -0.0623634 8.2530e-01 1.7365e-02 inconclusive 1.0000e+00 1.0000000 insignificant 9.8656e-01 1.1777e-02 inconclusive 1.0000000 1.000000 insignificant -0.0767282 0.0978478 insignificant 1.00000 insignificant 0.505789 0.852817 -0.334422 6 0.41857 0.856849 -0.4382747 1.0000e+00 9.0839e-16 hypomethylated 1.0000e+00 9.0839e-13 hypomethylated 1.0000e+00 5.0620e-10 hypomethylated 1.0000000 5.0620e-07 hypomethylated -4.6207e-01 5.4399e-04 hypomethylated 0.108798 insignificant chr1 200541939 200542939 11806 ENSG00000208209 0.851117 211 5 0.676170 138 5 0.59556 103 5 0.879877 191 5 0.654139 68 5 0.91760 331 6 0.704401 79 5 0.711933 147 5 0.804630 80 5 0.684177 67 6 0.88426 226 6 0.492424 44 3 0.890833 99 5 0.681319 55 5 0.767671 105 5 0.66667 24 3 0.111111 10 1 0.925153 292 5 0.763953 230 5 0.743022 214 6 0.73898 78 5 0.6595920 89 6 0.74612 108 5 0.75338 131 6 0.776764 97 4 0.744911 167 5 0.58365 111 5 0.752862 70 6 0.84169 196 5 0.744162 194 5 0.900856 160 5 0.733260 216 6 0.43470 123 5 0.75135 122 5 0.80912 165 5 0.300000 10 1 0.57253 155 6 0.568588 193 5 0.7421962 98 6 0.816600 162 5 0.971618 93 5 0.807120 110 5 0.726735 95 5 0.903695 0.66580 0.70674 0.911354 0.771983 0.940115 0.841138 0.837740 0.828866 0.798498 0.93447 0.65624 0.935756 0.919508 0.890711 0.75182 NA 0.884332 0.897867 0.889426 0.91715 0.826378 0.81563 0.872762 0.800731 0.861050 0.80935 0.82501 0.92071 0.933107 0.895835 0.93036 0.521593 0.699237 0.838237 0.541595 0.601138 0.466227 0.8133900 0.937719 0.959622 0.850664 0.759269 5 0.873618 0.878169 -0.00762874 5 0.74462 0.700325 0.0442973 4.2854e-01 0.656443 insignificant 1.000000 1 insignificant 0.4389423 0.343590 insignificant 1 1 insignificant -0.0277178 0.559882 lowCoverage 1 lowCoverage 0.873618 0.60937 0.2618551 5 0.744622 0.52769 0.216929 3.0471e-11 9.8261e-01 hypermethylated 2.5392e-09 1.0000e+00 hypermethylated 2.7894e-03 8.8276e-01 weaklyHypermeth 2.1457e-01 1.0000e+00 insignificant 0.147585 1.3166e-01 lowCoverage 1.00000000 lowCoverage 0.873618 0.881720 0.0077362 5 0.744622 0.696535 0.048088 4.6181e-01 0.78897203 insignificant 1.0000e+00 1.00000 insignificant 6.7061e-01 0.45527674 insignificant 1.0000e+00 1.00000 insignificant -0.092553 1.4684e-01 lowCoverage 1.000000 lowCoverage 0.878169 0.60937 0.2634573 5 0.70033 0.52769 0.172632 7.5465e-09 9.6123e-01 hypermethylated 6.8605e-07 1.0000e+00 hypermethylated 2.0631e-02 0.95588870 weaklyHypermeth 9.8242e-01 1.00000 insignificant 0.1753032 7.4580e-02 lowCoverage 1.000000 lowCoverage 0.878169 0.881720 0.01820209 5 0.700325 0.696535 0.0037905 2.9510e-01 6.8120e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.6230e-01 5.6941e-01 insignificant 1.0000000 1.000000 insignificant -0.0648355 0.2314974 insignificant 1.00000 insignificant 0.609375 0.881720 -0.247585 5 0.52769 0.696535 -0.1688416 9.9967e-01 5.3709e-04 hypomethylated 1.0000e+00 5.3709e-02 hypomethylated 9.9646e-01 6.9449e-02 insignificant 1.0000000 1.0000e+00 insignificant -2.4014e-01 2.8232e-02 lowCoverage 1.000000 lowCoverage chr1 201281164 201282164 11834 PPFIA4 ENSG00000143847 0.910048 331 10 0.943306 237 9 0.82771 184 7 0.901282 123 7 0.891699 135 9 0.83758 307 8 0.897059 219 9 0.836005 170 9 0.732843 179 8 0.832222 201 9 0.91497 342 10 0.862413 158 10 0.924165 237 9 NA 0 0 0.926621 230 9 0.85143 94 9 0.826456 122 9 0.945708 130 7 0.901948 264 10 0.789178 183 9 0.94182 88 6 0.7796886 45 4 0.93687 241 10 0.91525 120 9 0.890000 42 5 0.869830 329 10 0.82151 113 8 0.915230 105 7 0.92245 245 9 0.873433 289 10 0.958657 312 10 0.889198 304 9 0.88530 282 9 0.81690 231 10 0.78681 449 5 0.866667 81 7 0.90787 104 9 0.700513 162 7 0.9284400 309 10 0.941991 305 10 0.948140 209 9 0.961500 322 8 0.941295 245 9 0.920314 0.94312 0.81240 0.908730 0.912998 0.861844 0.908138 0.856494 0.809602 0.888318 0.92246 0.91238 0.914475 NA 0.942825 0.88228 0.895156 0.937023 0.893807 0.830396 0.91991 0.816829 0.94325 0.936252 0.889796 0.865304 0.86597 0.93049 0.90652 0.860488 0.938854 0.90535 0.844630 0.715885 0.918772 0.948980 0.916134 0.800538 0.9131997 0.944123 0.954724 0.963430 0.924442 4 0.886895 0.911330 -0.02551406 10 0.87707 0.906337 -0.0292712 9.8801e-01 0.014885 weaklyHypometh 1.000000 1 insignificant 0.9579501 0.020444 weaklyHypometh 1 1 insignificant -0.0216362 0.283355 insignificant 1 insignificant 0.886895 0.88694 0.0072591 9 0.877066 0.86056 0.016509 7.8208e-02 3.0924e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4795e-01 3.0583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.043848 2.3656e-01 insignificant 1.00000000 insignificant 0.886895 0.932374 -0.0486963 10 0.877066 0.943401 -0.066336 1.0000e+00 0.00015769 weaklyHypometh 1.0000e+00 0.15769 insignificant 9.9988e-01 0.00031697 weaklyHypometh 1.0000e+00 0.16637 insignificant -0.073082 3.1551e-05 weaklyHypometh 0.015775 weaklyHypometh 0.911330 0.88694 0.0293552 9 0.90634 0.86056 0.045780 3.2953e-02 8.7667e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.4996e-01 0.73746410 insignificant 1.0000e+00 1.00000 insignificant 0.0654841 9.8140e-02 insignificant 1.000000 insignificant 0.911330 0.932374 -0.03355391 10 0.906337 0.943401 -0.0370643 9.9959e-01 1.2655e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.4156e-01 1.4017e-02 weaklyHypometh 1.0000000 1.000000 insignificant -0.0514456 0.0061592 weaklyHypometh 0.76990 insignificant 0.886937 0.932374 -0.070296 9 0.86056 0.943401 -0.0828443 9.9911e-01 7.2014e-03 weaklyHypometh 1.0000e+00 4.5009e-01 insignificant 9.9484e-01 4.4125e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -1.1693e-01 1.2743e-02 weaklyHypometh 0.749608 insignificant chr1 202586346 202587346 11893 ENSG00000219133 0.051670 199 4 0.072789 141 6 0.22687 85 5 0.098142 270 4 0.101190 91 6 0.17323 289 4 0.020000 123 7 0.080628 110 6 0.165152 152 4 0.132936 128 6 0.11498 98 7 0.068277 77 4 0.153061 151 4 0.084848 48 4 0.045298 134 4 0.20170 52 4 0.000000 31 4 0.051231 261 4 0.371711 72 4 0.010352 235 4 0.20486 51 4 0.0064969 178 6 0.08113 166 4 0.13518 148 8 0.056808 159 7 0.059325 180 6 0.19462 146 7 0.052605 73 4 0.12060 91 4 0.065770 190 7 0.057692 122 6 0.082597 154 4 0.17635 123 6 0.16667 90 6 0.18981 142 5 0.204220 114 7 0.17521 73 6 0.203987 134 7 0.0026882 241 6 0.085714 221 4 0.011608 188 4 0.018962 217 4 0.042813 271 6 0.054056 0.08743 0.14961 0.068122 0.056873 0.058372 0.039514 0.111781 0.080954 0.114085 0.11620 0.12384 0.023135 0.022451 0.071152 0.12808 0.000000 0.072055 0.066482 0.017896 0.24876 0.012941 0.14331 0.073081 0.075384 0.057920 0.10627 0.06744 0.05821 0.019936 0.036904 0.14807 0.056796 0.053981 0.044984 0.069800 0.024914 0.025737 0.0033956 0.029825 0.018196 0.020655 0.022795 4 0.071845 0.079011 -0.00522127 4 0.11492 0.091651 0.0232662 7.3973e-01 0.653116 lowCoverage 1.000000 1 lowCoverage 0.8982145 0.591203 lowCoverage 1 1 lowCoverage 0.0180631 0.494244 lowCoverage 1 lowCoverage 0.072105 0.10207 -0.0067657 4 0.137140 0.21940 -0.082264 1.2984e-01 4.8343e-04 lowCoverage 1.0000e+00 8.0572e-02 lowCoverage 1.0276e-01 1.8024e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.074839 1.4657e-03 lowCoverage 0.11274902 lowCoverage 0.071272 0.018453 0.0516201 4 0.090608 0.035520 0.055088 2.2161e-03 0.99957233 lowCoverage 1.5829e-01 1.00000 lowCoverage 1.2488e-02 0.99628653 lowCoverage 9.9413e-01 1.00000 lowCoverage 0.078846 4.8730e-03 lowCoverage 0.437593 lowCoverage 0.079059 0.10222 -0.0233577 6 0.10311 0.24683 -0.143722 1.3138e-01 1.4835e-05 weaklyHypometh 1.0000e+00 3.7086e-03 weaklyHypometh 4.7057e-02 0.03481470 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0929016 1.8907e-04 weaklyHypometh 0.018907 weaklyHypometh 0.077812 0.018453 0.05604967 4 0.082123 0.035520 0.0466029 3.5271e-03 9.9852e-01 lowCoverage 2.9393e-01 1.0000000 lowCoverage 3.3275e-03 9.9946e-01 lowCoverage 0.3327523 1.000000 lowCoverage 0.0607833 0.0191054 lowCoverage 1.00000 lowCoverage 0.099702 0.018453 0.068899 4 0.18685 0.035520 0.1513323 1.2020e-03 9.4098e-01 lowCoverage 2.0033e-01 1.0000e+00 lowCoverage 1.3121e-01 8.5620e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 1.5368e-01 1.3318e-04 lowCoverage 0.044392 lowCoverage chr1 203069934 203070934 11908 NFASC ENSG00000163531 0.505195 235 3 0.166354 197 5 0.27375 138 5 0.205281 204 3 0.185322 158 5 0.33015 450 5 0.331183 188 5 0.331421 157 4 0.256238 159 5 0.184524 124 3 0.40870 233 4 0.192864 98 3 0.261692 170 4 0.267241 33 1 0.166332 153 3 0.47451 86 3 0.145541 117 4 0.241645 214 3 0.246591 77 3 0.240985 285 4 0.39052 89 4 0.1732812 137 4 0.19421 150 3 0.27408 129 5 0.451736 72 3 0.228901 272 5 0.24585 155 5 0.304410 54 4 0.44946 102 4 0.183521 224 4 0.185682 238 5 0.331495 272 4 0.20679 166 4 0.49114 103 4 0.19976 83 3 0.041667 31 3 0.55496 148 4 0.355809 191 5 0.0700918 340 4 0.140342 299 4 0.061900 251 4 0.335714 173 3 0.134857 311 4 0.271560 0.16559 0.25641 0.176853 0.113252 0.303620 0.224233 0.182756 0.205741 0.167528 0.27646 0.19465 0.139239 0.097876 0.132955 0.21383 0.122230 0.165556 0.235731 0.102187 0.21831 0.073544 0.23430 0.171391 0.189702 0.163408 0.25192 0.33343 0.14795 0.181250 0.141392 0.30965 0.192346 0.535558 0.090003 0.026042 0.377046 0.258028 0.0674902 0.125986 0.046836 0.187030 0.092658 3 0.213464 0.211193 0.00272646 5 0.23339 0.230110 0.0032784 6.2536e-01 0.483078 insignificant 1.000000 1 insignificant 0.8434505 0.657902 insignificant 1 1 insignificant -0.0136528 0.715535 lowCoverage 1 lowCoverage 0.213525 0.31856 -0.1000015 4 0.280066 0.34162 -0.061556 1.6156e-01 6.9734e-04 lowCoverage 1.0000e+00 8.7168e-02 lowCoverage 1.8051e-01 1.8423e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.037578 6.6574e-01 lowCoverage 1.00000000 lowCoverage 0.213464 0.098253 0.1054467 4 0.233388 0.110376 0.123012 3.6174e-05 1.00000000 lowCoverage 4.5217e-03 1.00000 lowCoverage 6.7479e-04 0.99999395 lowCoverage 6.7479e-02 1.00000 lowCoverage 0.122195 6.7301e-02 lowCoverage 1.000000 lowCoverage 0.211305 0.31856 -0.1034553 4 0.27613 0.34162 -0.065490 1.8247e-01 1.0406e-03 lowCoverage 1.0000e+00 1.8749e-01 lowCoverage 1.8833e-01 0.24807209 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0239257 7.8670e-01 lowCoverage 1.000000 lowCoverage 0.211193 0.098253 0.10283948 4 0.230110 0.110376 0.1197340 2.6486e-04 1.0000e+00 lowCoverage 2.9429e-02 1.0000000 lowCoverage 2.8966e-03 1.0000e+00 lowCoverage 0.3218406 1.000000 lowCoverage 0.1358473 0.0502735 lowCoverage 1.00000 lowCoverage 0.318560 0.098325 0.214162 4 0.34162 0.132451 0.2091707 3.1563e-04 9.8488e-01 lowCoverage 6.3126e-02 1.0000e+00 lowCoverage 6.0262e-02 9.7144e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 1.5977e-01 1.2592e-01 lowCoverage 1.000000 lowCoverage chr1 203492440 203493440 11921 TMCC2 ENSG00000133069 0.897160 203 8 0.793905 141 8 0.83466 183 8 0.913557 111 6 0.913333 132 6 0.93822 345 8 0.955268 170 8 0.865122 119 8 0.913129 142 6 0.881132 173 8 0.92756 262 8 0.936084 155 8 0.891278 139 8 NA 0 0 0.905676 157 8 0.85241 154 8 0.929314 143 8 0.943798 147 4 0.922707 130 5 0.865051 173 8 0.92252 149 7 0.7952381 77 5 0.86317 157 8 0.96875 111 7 0.845238 43 3 0.850744 153 8 0.92619 91 7 0.885898 104 7 0.85920 81 6 0.912990 109 8 0.879762 132 8 0.921497 235 8 0.79105 144 7 0.81902 122 6 0.75000 8 0 0.871429 52 4 0.84622 101 7 0.970118 159 8 0.8828327 154 5 0.846549 180 5 0.866098 104 3 0.904617 149 5 0.942729 150 5 0.958409 0.78810 0.86121 0.908235 0.924769 0.937284 0.980491 0.878191 0.919717 0.926306 0.93919 0.97656 0.903757 NA 0.898081 0.78296 0.960168 0.934307 0.919478 0.909937 0.96001 0.843056 0.85404 0.970803 0.936740 0.841944 0.96197 0.82754 0.89785 0.902362 0.852211 0.93184 0.802795 0.761309 0.825236 0.833279 0.904992 0.978373 0.8576265 0.875715 0.866450 0.915927 0.918568 3 0.919786 0.906380 0.01345959 8 0.90809 0.900586 0.0075086 2.4117e-01 0.547549 insignificant 1.000000 1 insignificant 0.4268306 0.498248 insignificant 1 1 insignificant 0.0129803 0.441749 insignificant 1 insignificant 0.919786 0.87884 0.0423914 6 0.908095 0.86434 0.043759 1.5186e-02 9.7696e-01 weaklyHypermeth 5.6244e-01 1.0000e+00 insignificant 2.1900e-01 9.4834e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.057607 1.2651e-01 insignificant 1.00000000 insignificant 0.919786 0.881954 0.0434264 5 0.908095 0.872182 0.035913 5.3943e-04 0.80528666 weaklyHypermeth 4.4953e-02 1.00000 weaklyHypermeth 7.2247e-02 0.33240090 insignificant 1.0000e+00 1.00000 insignificant 0.010349 6.0534e-01 lowCoverage 1.000000 lowCoverage 0.906380 0.87884 0.0285535 6 0.90059 0.86434 0.036250 1.3966e-01 9.2985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4949e-01 0.93442195 insignificant 1.0000e+00 1.00000 insignificant 0.0446268 2.2910e-01 insignificant 1.000000 insignificant 0.906380 0.881954 0.02416021 5 0.900586 0.872182 0.0284042 2.8100e-02 7.9574e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 4.4446e-01 4.5222e-01 insignificant 1.0000000 1.000000 insignificant -0.0026318 0.9046775 lowCoverage 1.00000 lowCoverage 0.878840 0.881954 -0.006115 3 0.86434 0.872182 -0.0078462 2.4093e-01 5.6174e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.4690e-01 5.2340e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -4.7259e-02 2.1837e-01 lowCoverage 1.000000 lowCoverage chr1 203595451 203596451 11923 KLHDC8A ENSG00000162873 0.683532 66 6 0.624676 151 6 0.81899 121 6 0.472222 20 1 0.899045 50 2 0.78848 159 6 0.657423 115 5 0.808967 134 6 0.802890 115 5 0.814771 115 6 0.84762 296 6 0.676091 76 5 0.606308 170 6 NA 0 0 0.747266 142 6 0.78581 64 4 0.746463 68 4 0.755281 66 5 0.806921 151 6 0.606555 132 6 0.64862 57 6 0.2500000 13 0 0.79282 129 6 0.81190 99 6 NA 0 0 0.718166 188 6 0.74016 79 5 0.907407 28 2 0.58931 133 5 0.694594 243 6 0.550392 215 6 0.801108 162 6 0.31009 204 6 0.33845 153 6 0.50000 102 6 0.423016 33 5 0.54897 110 6 0.042229 250 6 0.1654098 91 6 0.374514 125 6 0.227273 52 6 0.675758 63 6 0.374603 40 5 0.715079 0.65487 0.83471 0.523333 0.900692 0.814986 0.702064 0.835497 0.797811 0.828002 0.86564 0.70030 0.639746 NA 0.778116 0.80238 0.790798 0.800026 0.820863 0.632292 0.65960 0.290000 0.81247 0.834571 NA 0.752157 0.74463 0.90000 0.64545 0.738740 0.583698 0.81142 0.331857 0.416400 0.580000 0.486095 0.607366 0.049556 0.1693389 0.419141 0.226182 0.722061 0.409619 1 0.781999 0.746657 0.04151112 6 0.74777 0.701997 0.0457700 3.9421e-02 0.991079 weaklyHypermeth 1.000000 1 insignificant 0.0738908 0.983209 insignificant 1 1 insignificant 0.0519478 0.389799 lowCoverage 1 lowCoverage 0.781999 0.38146 0.4211667 6 0.747767 0.28647 0.461296 2.5677e-25 1.0000e+00 hypermethylated 1.2839e-22 1.0000e+00 hypermethylated 2.2325e-08 9.9993e-01 hypermethylated 7.4416e-06 1.0000e+00 hypermethylated 0.373716 2.8066e-03 lowCoverage 0.17541029 lowCoverage 0.781999 0.382749 0.3830493 6 0.747767 0.363649 0.384118 6.8174e-20 1.00000000 hypermethylated 6.8174e-17 1.00000 hypermethylated 2.3577e-08 1.00000000 hypermethylated 2.3577e-05 1.00000 hypermethylated 0.370663 1.1523e-02 lowCoverage 0.823092 lowCoverage 0.746657 0.38146 0.3741452 6 0.70200 0.28647 0.415526 3.1114e-14 1.0000e+00 hypermethylated 4.4449e-12 1.0000e+00 hypermethylated 1.5569e-05 0.99856696 hypermethylated 2.2242e-03 1.00000 hypermethylated 0.3217681 5.2371e-03 lowCoverage 0.327322 lowCoverage 0.746657 0.382749 0.33820732 6 0.701997 0.363649 0.3383480 2.6127e-11 1.0000e+00 hypermethylated 1.3063e-08 1.0000000 hypermethylated 2.1858e-05 1.0000e+00 hypermethylated 0.0072861 1.000000 hypermethylated 0.3187148 0.0172515 lowCoverage 1.00000 lowCoverage 0.381455 0.382749 -0.059964 6 0.28647 0.363649 -0.0771783 9.6534e-01 9.0083e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7201e-01 1.9818e-01 insignificant 1.0000000 1.0000e+00 insignificant -3.0534e-03 9.7944e-01 insignificant 1.000000 insignificant chr1 203665234 203666234 11928 LEMD1 ENSG00000186007 0.955808 42 5 0.539506 151 6 0.77606 96 6 0.833333 10 0 0.779537 73 6 0.76398 84 6 0.730196 86 6 0.887433 108 6 0.897494 98 6 0.862749 118 6 0.80337 224 6 0.887686 65 5 0.766651 143 6 NA 0 0 0.776190 83 6 0.70000 22 2 0.867593 37 4 0.533333 16 1 0.850965 126 6 0.764685 43 3 0.84660 59 5 0.6250000 5 0 0.72266 90 5 0.87500 48 6 1.000000 2 0 0.787274 151 6 0.95833 38 4 0.674150 50 5 0.54002 106 6 0.860576 145 6 0.849875 144 6 0.792884 60 5 0.41109 182 6 0.25556 116 5 0.55000 26 1 0.250000 7 0 0.77937 45 5 0.168520 167 6 0.3485714 22 3 0.944444 35 3 0.750000 3 0 0.750000 4 0 0.785516 29 4 0.898019 0.65509 0.75962 0.815356 0.763337 0.769635 0.694534 0.866806 0.854945 0.853741 0.83692 0.89621 0.811797 NA 0.786813 0.79040 0.836325 0.784615 0.870524 0.764725 0.71886 0.386965 0.75814 0.850000 NA 0.781637 0.90385 0.72711 0.74237 0.846568 0.856282 0.79177 0.433802 0.352564 0.834615 0.402715 0.768498 0.083886 0.5068681 0.914530 0.758371 0.903846 0.756319 0 0.801846 0.807350 -0.00694436 6 0.80392 0.727063 0.0768567 9.4910e-01 0.557566 insignificant 1.000000 1 insignificant 0.7370781 0.619085 insignificant 1 1 insignificant -0.0061237 0.896090 lowCoverage 1 lowCoverage 0.802096 0.34807 0.4609361 6 0.823527 0.44458 0.378943 4.7806e-25 1.0000e+00 hypermethylated 1.5935e-22 1.0000e+00 hypermethylated 1.0334e-06 1.0000e+00 hypermethylated 2.5834e-04 1.0000e+00 hypermethylated 0.385819 7.9997e-03 lowCoverage 0.47057158 lowCoverage 0.801724 0.752688 0.0466440 1 0.775908 0.794966 -0.019058 1.9038e-01 0.85822464 lowCoverage 1.0000e+00 1.00000 lowCoverage 5.5300e-01 0.57987269 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.072534 5.1090e-01 lowCoverage 1.000000 lowCoverage 0.806920 0.34807 0.4717689 6 0.68807 0.44458 0.243488 5.5999e-18 1.0000e+00 hypermethylated 1.8666e-15 1.0000e+00 hypermethylated 9.8082e-06 0.98607690 hypermethylated 2.1081e-03 1.00000 hypermethylated 0.3919430 6.5858e-03 lowCoverage 0.373843 lowCoverage 0.810962 0.752688 0.05451699 1 0.830929 0.794966 0.0359631 2.0304e-01 9.7022e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.9962e-01 7.7167e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.0786580 0.4894374 lowCoverage 1.00000 lowCoverage 0.346863 0.750000 -0.408404 1 0.35201 0.760794 -0.4087793 1.0000e+00 1.3427e-06 lowCoverage 1.0000e+00 2.2379e-04 lowCoverage 9.9960e-01 4.1081e-03 lowCoverage 1.0000000 4.8597e-01 lowCoverage -3.1329e-01 4.7468e-02 lowCoverage 1.000000 lowCoverage chr1 203905955 203906955 11940 ELK4 ENSG00000158711 0.051972 199 5 0.280898 236 5 0.34324 275 6 0.038780 119 4 0.019416 191 6 0.21876 420 6 0.083488 339 6 0.110263 271 6 0.098534 345 6 0.074564 293 6 0.15726 282 6 0.222835 205 5 0.018117 287 6 0.033333 44 2 0.034208 316 6 0.10577 99 5 0.024952 206 5 0.256888 131 5 0.050835 202 5 0.011132 285 6 0.41218 90 4 0.0197564 139 4 0.31229 187 5 0.12818 164 6 0.103030 27 3 0.071663 305 6 0.16032 219 6 0.146201 97 5 0.15138 224 6 0.080114 346 6 0.073653 346 6 0.315289 282 6 0.37181 284 6 0.31158 160 5 0.40625 87 4 0.340936 59 5 0.51460 113 5 0.389360 297 5 0.0227332 226 5 0.042637 243 5 0.028571 130 5 0.012987 174 5 0.026117 191 5 0.062429 0.13443 0.21516 0.047963 0.020903 0.131965 0.090734 0.079693 0.086582 0.051359 0.16971 0.18481 0.021240 0.064635 0.028362 0.12583 0.045008 0.151507 0.050927 0.015040 0.31836 0.026058 0.15673 0.120118 0.144439 0.061824 0.14472 0.11363 0.12454 0.021392 0.077028 0.31420 0.257428 0.294861 0.280022 0.266385 0.343365 0.385313 0.0199850 0.051305 0.029464 0.012635 0.025485 4 0.094204 0.124175 -0.03360317 6 0.15646 0.136380 0.0200840 9.5533e-01 0.043930 weaklyHypometh 1.000000 1 insignificant 0.9818777 0.119628 insignificant 1 1 insignificant -0.0527410 0.213872 insignificant 1 insignificant 0.093862 0.35800 -0.2642393 6 0.099208 0.40237 -0.303160 8.2240e-01 9.1426e-26 hypomethylated 1.0000e+00 4.5713e-23 hypomethylated 6.5204e-01 1.5222e-08 hypomethylated 1.0000e+00 7.6109e-06 hypomethylated -0.277326 6.7577e-06 hypomethylated 0.00096538 hypomethylated 0.093862 0.025934 0.0611008 5 0.099208 0.027283 0.071925 2.1791e-04 0.99999838 weaklyHypermeth 1.9810e-02 1.00000 weaklyHypermeth 1.2486e-04 0.99999973 weaklyHypermeth 1.7891e-02 1.00000 weaklyHypermeth 0.085154 1.3274e-03 weaklyHypermeth 0.165925 insignificant 0.124224 0.35800 -0.2294571 6 0.14059 0.40237 -0.261777 6.5370e-01 7.2438e-13 hypomethylated 1.0000e+00 2.4146e-10 hypomethylated 3.7954e-01 0.00032084 hypomethylated 1.0000e+00 0.10695 insignificant -0.2245851 1.4510e-04 hypomethylated 0.016122 hypomethylated 0.124224 0.025934 0.09286471 5 0.140592 0.027283 0.1133082 1.2980e-04 1.0000e+00 weaklyHypermeth 1.6225e-02 1.0000000 weaklyHypermeth 1.6321e-05 1.0000e+00 weaklyHypermeth 0.0072861 1.000000 weaklyHypermeth 0.1378947 0.0020558 weaklyHypermeth 0.29369 insignificant 0.358000 0.025934 0.348540 5 0.40237 0.027283 0.3750851 6.0758e-14 9.9804e-01 hypermethylated 3.0379e-11 1.0000e+00 hypermethylated 2.1434e-05 9.9821e-01 hypermethylated 0.0093956 1.0000e+00 hypermethylated 3.6248e-01 4.0718e-05 hypermethylated 0.020359 hypermethylated chr1 203906232 203907232 11941 ELK4 ENSG00000158711 0.051972 199 5 0.280898 236 5 0.34324 275 6 0.038780 119 4 0.019416 191 6 0.21876 420 6 0.083488 339 6 0.110263 271 6 0.098534 345 6 0.074564 293 6 0.15726 282 6 0.222835 205 5 0.018117 287 6 0.033333 44 2 0.034208 316 6 0.10577 99 5 0.024952 206 5 0.256888 131 5 0.050835 202 5 0.011132 285 6 0.41218 90 4 0.0197564 139 4 0.31229 187 5 0.12818 164 6 0.103030 27 3 0.071663 305 6 0.16032 219 6 0.146201 97 5 0.15138 224 6 0.080114 346 6 0.073653 346 6 0.315289 282 6 0.37181 284 6 0.31158 160 5 0.40625 87 4 0.340936 59 5 0.51460 113 5 0.389360 297 5 0.0227332 226 5 0.042637 243 5 0.028571 130 5 0.012987 174 5 0.026117 191 5 0.062429 0.13443 0.21516 0.047963 0.020903 0.131965 0.090734 0.079693 0.086582 0.051359 0.16971 0.18481 0.021240 0.064635 0.028362 0.12583 0.045008 0.151507 0.050927 0.015040 0.31836 0.026058 0.15673 0.120118 0.144439 0.061824 0.14472 0.11363 0.12454 0.021392 0.077028 0.31420 0.257428 0.294861 0.280022 0.266385 0.343365 0.385313 0.0199850 0.051305 0.029464 0.012635 0.025485 4 0.094204 0.124175 -0.03360317 6 0.15646 0.136380 0.0200840 9.5533e-01 0.043930 weaklyHypometh 1.000000 1 insignificant 0.9818777 0.119628 insignificant 1 1 insignificant -0.0527410 0.213872 insignificant 1 insignificant 0.093862 0.35800 -0.2642393 6 0.099208 0.40237 -0.303160 8.2240e-01 9.1426e-26 hypomethylated 1.0000e+00 4.5713e-23 hypomethylated 6.5204e-01 1.5222e-08 hypomethylated 1.0000e+00 7.6109e-06 hypomethylated -0.277326 6.7577e-06 hypomethylated 0.00096538 hypomethylated 0.093862 0.025934 0.0611008 5 0.099208 0.027283 0.071925 2.1791e-04 0.99999838 weaklyHypermeth 1.9810e-02 1.00000 weaklyHypermeth 1.2486e-04 0.99999973 weaklyHypermeth 1.7891e-02 1.00000 weaklyHypermeth 0.085154 1.3274e-03 weaklyHypermeth 0.165925 insignificant 0.124224 0.35800 -0.2294571 6 0.14059 0.40237 -0.261777 6.5370e-01 7.2438e-13 hypomethylated 1.0000e+00 2.4146e-10 hypomethylated 3.7954e-01 0.00032084 hypomethylated 1.0000e+00 0.10695 insignificant -0.2245851 1.4510e-04 hypomethylated 0.016122 hypomethylated 0.124224 0.025934 0.09286471 5 0.140592 0.027283 0.1133082 1.2980e-04 1.0000e+00 weaklyHypermeth 1.6225e-02 1.0000000 weaklyHypermeth 1.6321e-05 1.0000e+00 weaklyHypermeth 0.0072861 1.000000 weaklyHypermeth 0.1378947 0.0020558 weaklyHypermeth 0.29369 insignificant 0.358000 0.025934 0.348540 5 0.40237 0.027283 0.3750851 6.0758e-14 9.9804e-01 hypermethylated 3.0379e-11 1.0000e+00 hypermethylated 2.1434e-05 9.9821e-01 hypermethylated 0.0093956 1.0000e+00 hypermethylated 3.6248e-01 4.0718e-05 hypermethylated 0.020359 hypermethylated chr1 204693665 204694665 12006 SRGAP2 ENSG00000163486 0.91223 193 6 0.82803 72 6 0.77603 76 6 0.88997 211 6 0.92083 44 4 0.93693 317 6 0.87179 82 6 0.91071 105 6 0.85663 103 5 0.69421 133 4 0.89354 127 6 0.85928 55 4 0.94771 90 4 0.97701 81 4 0.96270 84 4 0.9777778 60 4 0.77083 16 1 0.73966 199 6 0.96429 31 3 0.90233 149 6 0.85000 35 5 0.90169 71 4 0.94841 73 4 0.91837 29 3 0.83155 93 6 0.93326 101 6 0.58425 55 4 0.87500 27 3 1.00000 48 4 0.88704 84 6 0.93076 97 4 0.91312 217 6 0.880547 86 6 0.9582516 73 6 0.7142857 118 5 0.91667 37 6 0.80104 84 6 0.9703557 120 6 0.918744 167 6 0.94273 199 6 0.72967 198 6 0.91185 111 4 0.92099 187 6 0.87172 0.87035 0.78144 0.91139 0.86268 0.93183 0.82724 0.92055 0.84574 0.86227 0.85192 0.82940 0.91660 0.95802 0.93868 0.9690821 0.76143 0.85048 0.94203 0.88422 0.86667 0.86788 0.91615 0.96687 0.93030 0.93290 0.83965 0.84736 1.00000 0.89773 0.88558 0.87630 0.915049 0.970780 0.9911264 0.963768 0.944950 0.9669474 0.91206 0.93058 0.93060 0.87527 0.91027 3 0.89119 0.90065 -0.0117342 6 0.83867 0.91998 -0.0813087 0.95877 1.4008e-01 insignificant 1 1.0000000 insignificant 0.98635 0.03697673 weaklyHypometh 1 1.00000 insignificant -0.0014956 0.9663919 lowCoverage 1 lowCoverage 0.89169 0.941634 -0.055330 6 0.92134 0.713551 0.207789 9.9996e-01 0.0030612 weaklyHypometh 1.0000e+00 1 insignificant 9.0307e-01 0.0064529 weaklyHypometh 1.0000e+00 1 insignificant 0.0061015 8.9437e-01 lowCoverage 1.0000e+00 lowCoverage 0.89119 0.91628 -0.02448777 6 0.83867 0.79016 0.04851578 9.6073e-01 0.15729274 insignificant 1.0000e+00 1.00000 insignificant 9.2732e-01 0.3763044 insignificant 1.0000e+00 1 insignificant -0.0051720 9.0860e-01 lowCoverage 1.00000000 lowCoverage 0.89882 0.943689 -0.047793 6 0.76332 0.838551 -0.075232 9.9597e-01 0.018729 weaklyHypometh 1.0000e+00 1 insignificant 9.8600e-01 0.12917 insignificant 1.0000e+00 1 insignificant 0.0075971 8.8285e-01 lowCoverage 1.0000e+00 lowCoverage 0.89892 0.91531 -0.0138791 6 0.78962 0.72568 0.0639376 8.6265e-01 0.68521 insignificant 1.0000e+00 1 insignificant 5.0673e-01 0.91418 insignificant 1.000000 1 insignificant -0.0036764 0.9421564 lowCoverage 1.00000 lowCoverage 0.943689 0.91638 0.0260899 6 0.838551 0.81639 0.022162 0.012237 9.8451e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.021087 9.7361e-01 weaklyHypermeth 1 1.0000e+00 insignificant -0.011273 8.4570e-01 insignificant 1.00000000 insignificant chr1 206113310 206114310 12032 C1orf132 ENSG00000203709 0.68243 147 5 0.71060 108 5 0.72568 77 5 0.83711 156 5 0.82144 79 5 0.75087 271 5 0.57611 85 5 0.80091 98 5 0.65797 87 5 0.79333 41 2 0.85085 136 5 0.80684 31 2 0.67392 79 5 0.71667 43 5 0.55911 60 2 0.3000000 24 2 0.67045 42 2 0.88011 161 5 0.61277 55 4 0.81804 123 5 0.71667 29 1 0.91067 40 2 0.71313 69 4 0.84462 71 5 0.82022 47 4 0.76400 136 5 0.65426 69 5 0.87255 29 2 0.82052 71 4 0.78685 142 5 0.83291 123 5 0.85237 168 5 0.513744 94 5 0.5000000 44 4 0.4496257 160 5 0.56667 14 0 0.67914 86 5 0.6252795 108 5 0.758490 178 5 0.82102 140 4 0.74086 166 5 0.49038 99 2 0.79521 111 5 0.79755 0.79841 0.73830 0.85014 0.87029 0.79171 0.72196 0.79705 0.67127 0.80045 0.83147 0.79649 0.75933 0.74155 0.70846 0.4879344 0.70393 0.86646 0.76162 0.82002 0.76914 0.86358 0.71492 0.81804 0.87028 0.82609 0.73395 0.83391 0.72934 0.84343 0.83525 0.87718 0.306892 0.388031 0.2632028 0.537162 0.479849 0.7468776 0.72963 0.76369 0.72529 0.49292 0.74001 1 0.79191 0.80986 -0.0189022 5 0.75283 0.78421 -0.0313819 0.95020 1.9399e-01 insignificant 1 1.0000000 insignificant 0.99730 0.02608649 weaklyHypometh 1 1.00000 insignificant -0.0868018 0.0253303 lowCoverage 1 lowCoverage 0.79191 0.446640 0.344011 5 0.75283 0.561709 0.191124 1.8766e-11 0.8014608 hypermethylated 8.8113e-10 1 hypermethylated 2.1149e-04 0.6807509 hypermethylated 8.4597e-03 1 hypermethylated 0.1565176 4.5396e-03 lowCoverage 2.1617e-01 lowCoverage 0.79191 0.69020 0.07979983 5 0.75283 0.75343 -0.00059537 3.3386e-03 0.37913008 weaklyHypermeth 1.5487e-01 1.00000 insignificant 7.7631e-02 0.1650143 insignificant 1.0000e+00 1 insignificant -0.0089326 8.9737e-01 lowCoverage 1.00000000 lowCoverage 0.80986 0.446640 0.362433 5 0.78421 0.561709 0.222506 3.2869e-10 0.973278 hypermethylated 1.6434e-08 1 hypermethylated 7.2921e-06 0.99444 hypermethylated 4.5575e-04 1 hypermethylated 0.2433194 2.1911e-04 lowCoverage 1.3694e-02 lowCoverage 0.80986 0.69020 0.0891893 5 0.78421 0.75343 0.0307865 1.1432e-02 0.72602 weaklyHypermeth 3.9419e-01 1 insignificant 4.1557e-02 0.88209 weaklyHypermeth 1.000000 1 insignificant 0.0778692 0.2714966 lowCoverage 1.00000 lowCoverage 0.446640 0.69020 -0.2667564 5 0.561709 0.75343 -0.191719 0.994045 1.5191e-03 weaklyHypometh 1 6.0763e-02 weaklyHypometh 0.997832 1.2670e-02 weaklyHypometh 1 5.2793e-01 insignificant -0.165450 4.9283e-02 lowCoverage 1.00000000 lowCoverage chr1 206459414 206460414 12092 ENSG00000216137 0.80588 122 5 0.66122 104 5 0.58596 89 5 0.80556 38 4 0.67104 54 4 0.79405 214 5 0.67584 78 5 0.58737 116 5 0.65912 95 5 0.79459 106 5 0.77473 164 5 0.50232 72 5 0.60881 162 5 NA 0 0 0.73327 86 5 0.5511779 88 4 0.56209 82 5 0.40201 83 4 0.60787 114 5 0.76164 135 5 0.79308 77 5 0.34800 45 2 0.72855 86 5 0.78833 68 5 0.90833 26 2 0.56928 190 5 0.85489 74 5 0.77863 35 4 0.63664 100 4 0.75520 211 5 0.73531 172 5 0.88444 138 5 0.118089 159 5 0.1349359 121 5 0.2500000 107 4 0.00000 50 3 0.15417 48 5 0.0040816 263 5 0.777841 101 4 0.40876 99 5 0.61302 81 4 0.42553 110 4 0.42981 113 4 0.76213 0.65334 0.58319 0.79794 0.67228 0.77031 0.78300 0.55968 0.65546 0.83303 0.79518 0.48339 0.56286 NA 0.73824 0.6831636 0.59938 0.48233 0.58004 0.79554 0.80898 0.33185 0.74620 0.74332 0.89651 0.53918 0.84555 0.76586 0.59688 0.72875 0.69161 0.85657 0.103006 0.105252 0.2580645 0.000000 0.174227 0.0052666 0.72313 0.43597 0.60005 0.36478 0.52389 3 0.68981 0.77660 -0.0872379 5 0.68286 0.75710 -0.0742373 0.94854 4.5853e-05 weaklyHypometh 1 0.0229265 weaklyHypometh 0.98395 0.00084792 weaklyHypometh 1 0.42396 insignificant -0.0714851 0.1835000 lowCoverage 1 lowCoverage 0.68981 0.125668 0.578156 5 0.68286 0.092359 0.590502 2.2562e-33 1.0000000 hypermethylated 5.6404e-31 1 hypermethylated 1.2244e-11 1.0000000 hypermethylated 4.0813e-09 1 hypermethylated 0.5500261 3.6468e-07 lowCoverage 7.2935e-05 lowCoverage 0.68981 0.49405 0.16546959 4 0.68286 0.50752 0.17533689 2.9490e-05 0.99533404 lowCoverage 2.9490e-03 1.00000 lowCoverage 7.1818e-03 0.9582012 lowCoverage 4.8815e-01 1 lowCoverage 0.1292442 1.5167e-01 lowCoverage 1.00000000 lowCoverage 0.77660 0.125668 0.664722 5 0.75710 0.092359 0.664739 2.5297e-27 1.000000 hypermethylated 6.3128e-25 1 hypermethylated 1.9981e-10 1.00000 hypermethylated 6.6603e-08 1 hypermethylated 0.6215111 2.6542e-08 lowCoverage 1.3271e-05 lowCoverage 0.77660 0.49405 0.2153768 4 0.75710 0.50752 0.2495741 7.4910e-07 1.00000 lowCoverage 9.3637e-05 1 lowCoverage 8.0183e-04 0.99999 lowCoverage 0.080183 1 lowCoverage 0.2007292 0.0484979 lowCoverage 1.00000 lowCoverage 0.125668 0.49405 -0.4329858 4 0.092359 0.50752 -0.415165 1.000000 7.7569e-11 lowCoverage 1 1.1081e-08 lowCoverage 1.000000 1.6408e-06 lowCoverage 1 5.4694e-04 lowCoverage -0.420782 1.8992e-03 lowCoverage 0.11870038 lowCoverage chr1 207073986 207074986 12226 ENSG00000217293 0.52092 156 5 0.40625 95 5 0.57500 22 2 0.71879 107 5 0.63730 41 5 0.71231 246 5 0.68925 105 5 0.67333 70 5 0.66333 54 5 0.83636 37 5 0.68772 186 5 0.30000 8 0 0.67429 31 5 0.82000 21 2 0.60000 33 5 0.8800000 16 2 NA 0 0 0.17343 84 5 0.80000 19 0 0.57669 111 5 NA 0 0 0.33333 5 0 NA 0 0 0.46667 24 2 0.72000 17 3 0.62731 326 5 0.38667 46 5 0.54091 33 3 0.64355 84 5 0.00000 3 0 0.69881 292 5 0.68196 212 5 NA 0 0 0.0080000 92 5 0.0461538 358 5 0.00000 12 2 0.33333 3 0 0.0070315 456 5 0.094452 438 5 0.19845 202 5 0.31956 70 5 0.16680 87 5 0.21682 176 5 0.57407 0.44631 0.62500 0.78363 0.61574 0.77515 0.63360 0.72222 0.57222 0.72727 0.69960 0.33333 0.69524 0.86667 0.61905 0.8000000 NA 0.22170 0.75000 0.68045 NA 0.33333 NA 0.55556 0.60000 0.58626 0.42222 0.65152 0.64120 0.34913 0.66676 0.75822 NA 0.013333 0.0769231 0.086667 0.333333 0.0000000 0.12964 0.26098 0.45294 0.24291 0.29231 0 0.60888 0.62668 -0.0170174 5 0.60462 0.62967 -0.0250413 0.79122 3.8057e-01 insignificant 1 1.0000000 insignificant 0.12339 0.93940771 insignificant 1 1.00000 insignificant 0.1187631 0.1672093 lowCoverage 1 lowCoverage 0.60888 0.011944 0.594284 5 0.60462 0.013118 0.591506 1.4618e-22 1.0000000 hypermethylated 1.6242e-20 1 hypermethylated 2.7908e-08 1.0000000 hypermethylated 3.5416e-06 1 hypermethylated 0.5497790 1.1017e-04 lowCoverage 8.4749e-03 lowCoverage 0.60888 0.15313 0.42759227 5 0.60462 0.15688 0.44774020 1.2752e-16 1.00000000 hypermethylated 6.3758e-14 1.00000 hypermethylated 1.8304e-08 1.0000000 hypermethylated 9.1522e-06 1 hypermethylated 0.4294677 1.1172e-06 lowCoverage 0.00055858 lowCoverage 0.62668 0.011944 0.612053 5 0.62967 0.013118 0.616548 5.8325e-23 1.000000 hypermethylated 9.7208e-21 1 hypermethylated 9.0628e-05 1.00000 hypermethylated 4.3156e-03 1 hypermethylated 0.4310159 7.2984e-04 lowCoverage 3.8412e-02 lowCoverage 0.62668 0.15313 0.4416209 5 0.62967 0.15688 0.4727815 2.9680e-19 1.00000 hypermethylated 2.9680e-16 1 hypermethylated 9.0156e-05 0.99981 hypermethylated 0.018031 1 hypermethylated 0.3107046 0.0019682 lowCoverage 0.65606 lowCoverage 0.011944 0.15313 -0.1272385 5 0.013118 0.15688 -0.143766 0.999973 1.8778e-05 weaklyHypometh 1 1.1736e-03 weaklyHypometh 0.999989 2.4082e-04 weaklyHypometh 1 2.0068e-02 weaklyHypometh -0.120311 1.5157e-01 lowCoverage 1.00000000 lowCoverage chr1 207748738 207749738 12359 MIR205 ENSG00000207623 0.90583 97 5 0.86471 37 2 0.50000 27 2 0.88385 54 5 0.88889 6 0 0.88838 552 5 0.83333 12 0 0.80556 30 2 0.79697 25 2 0.60000 10 0 0.80145 76 5 0.83333 6 0 0.69818 42 2 1.00000 2 0 0.46000 18 1 1.0000000 1 0 0.60417 9 0 0.86133 80 5 0.75453 72 5 0.82397 421 5 0.81667 39 4 0.89202 70 5 0.81538 44 3 0.88667 23 3 0.74274 41 5 0.89561 89 5 0.93462 70 5 0.38095 19 0 0.82619 45 4 0.75984 97 5 0.88925 70 5 0.84484 186 5 0.777778 37 5 0.4714286 23 2 0.7240868 83 4 0.88889 24 3 0.88889 27 3 0.8345539 93 5 0.878451 78 4 0.84603 73 5 0.83677 82 5 0.79333 50 3 0.87486 75 5 0.90254 0.84738 0.56757 0.87647 0.80086 0.84445 0.87838 0.82432 0.85872 0.78378 0.77790 0.87230 0.73435 0.85702 0.47297 0.8570240 0.75251 0.87003 0.93853 0.89107 0.82432 0.85783 0.83992 0.91892 0.90596 0.90431 0.90042 0.63514 0.81892 0.79353 0.92574 0.86421 0.715573 0.543436 0.6507197 0.897898 0.909910 0.7889640 0.87635 0.85972 0.86084 0.80360 0.87336 0 0.84020 0.85498 -0.0063156 5 0.83887 0.69220 0.1466670 0.92269 6.7558e-01 insignificant 1 1.0000000 insignificant 0.73703 0.21106311 insignificant 1 1.00000 insignificant -0.0168412 0.7563418 lowCoverage 1 lowCoverage 0.84020 0.749129 0.094880 5 0.83887 0.828042 0.010826 4.8364e-03 0.9949256 weaklyHypermeth 1.1298e-01 1 insignificant 4.4102e-01 0.8247263 insignificant 1.0000e+00 1 insignificant 0.0259526 7.2890e-01 lowCoverage 1.0000e+00 lowCoverage 0.83990 0.80726 0.03210348 5 0.81201 0.86682 -0.05481051 2.1192e-01 0.16960602 insignificant 1.0000e+00 1.00000 insignificant 7.7425e-01 0.0550265 insignificant 1.0000e+00 1 insignificant -0.0556667 1.4203e-01 lowCoverage 1.00000000 lowCoverage 0.85498 0.749129 0.098583 5 0.69220 0.828042 -0.135841 8.8756e-03 0.984631 weaklyHypermeth 1.8884e-01 1 insignificant 2.0632e-01 0.73347 insignificant 1.0000e+00 1 insignificant 0.0427938 5.9020e-01 lowCoverage 1.0000e+00 lowCoverage 0.85823 0.80726 0.0302258 5 0.80757 0.86682 -0.0592553 2.5061e-01 0.24146 insignificant 1.0000e+00 1 insignificant 3.0709e-01 0.29798 insignificant 1.000000 1 insignificant -0.0388255 0.4019131 lowCoverage 1.00000 lowCoverage 0.747368 0.80726 -0.0682090 5 0.799382 0.86682 -0.067441 0.990505 1.9510e-02 weaklyHypometh 1 5.4196e-01 insignificant 0.981611 9.8250e-02 insignificant 1 1.0000e+00 insignificant -0.081619 2.6579e-01 lowCoverage 1.00000000 lowCoverage chr1 208119532 208120532 12378 C1orf107 ENSG00000117597 0.84075 221 5 0.75554 122 5 0.52054 75 5 0.89500 260 5 0.70950 89 5 0.87489 308 5 0.57615 96 5 0.63992 136 5 0.62523 170 5 0.61501 182 5 0.76560 161 5 0.62166 291 5 0.69460 258 5 0.53103 54 5 0.58522 249 5 0.3695328 323 4 0.56448 234 4 0.42591 288 5 0.57226 272 5 0.90310 222 5 0.68209 81 5 0.71090 109 5 0.84582 129 5 0.88861 74 5 0.89863 55 5 0.66646 90 5 0.90591 89 5 0.91212 37 5 0.60809 146 5 0.93954 110 5 0.88329 108 5 0.87431 173 5 0.461398 131 5 0.5229271 128 5 0.9638095 76 5 0.00000 32 5 0.15567 99 5 0.5678961 106 5 0.507805 293 5 0.64246 213 5 0.86351 323 5 0.70205 216 5 0.61708 265 5 0.83683 0.74643 0.50606 0.89031 0.65515 0.88265 0.52868 0.58759 0.57992 0.55068 0.74948 0.54092 0.65581 0.48733 0.52728 0.3566389 0.48713 0.50837 0.50269 0.89944 0.64823 0.73102 0.84259 0.87427 0.89674 0.65903 0.91380 0.92437 0.58169 0.93565 0.88102 0.86927 0.465294 0.512328 0.9606204 0.000000 0.148740 0.5826713 0.51204 0.65369 0.87238 0.69715 0.61369 5 0.50698 0.79767 -0.1923152 5 0.61243 0.79939 -0.1869641 0.99234 1.1686e-06 weaklyHypometh 1 0.0011686 weaklyHypometh 0.96858 0.00039152 weaklyHypometh 1 0.39152 insignificant -0.1636851 0.0017746 lowCoverage 1 lowCoverage 0.50698 0.430070 0.167748 5 0.61243 0.432742 0.179687 1.4303e-07 0.8066485 weaklyHypermeth 4.9320e-06 1 weaklyHypermeth 8.3388e-03 0.9710094 weaklyHypermeth 2.6059e-01 1 insignificant 0.2090125 1.9523e-01 lowCoverage 1.0000e+00 lowCoverage 0.50698 0.68015 -0.12683547 5 0.61243 0.67271 -0.06028583 1.1294e-02 0.02986656 weaklyHypometh 4.3438e-01 1.00000 insignificant 6.3600e-03 0.2213345 inconclusive 4.8815e-01 1 insignificant -0.0122858 8.6049e-01 lowCoverage 1.00000000 lowCoverage 0.79767 0.430070 0.366661 5 0.79939 0.432742 0.366651 3.3740e-09 1.000000 hypermethylated 1.6067e-07 1 hypermethylated 8.8160e-05 1.00000 hypermethylated 4.3156e-03 1 hypermethylated 0.3726976 4.2137e-02 weaklyHypermeth 1.0000e+00 insignificant 0.79767 0.68015 0.1263378 5 0.79939 0.67271 0.1266783 5.6107e-04 0.99910 weaklyHypermeth 4.3160e-02 1 weaklyHypermeth 5.3142e-04 0.99997 weaklyHypermeth 0.066427 1 weaklyHypermeth 0.1513993 0.0605060 insignificant 1.00000 insignificant 0.430070 0.68015 -0.2447603 5 0.432742 0.67271 -0.239972 0.999726 5.3761e-03 weaklyHypometh 1 1.8538e-01 insignificant 0.997939 9.7977e-02 insignificant 1 1.0000e+00 insignificant -0.221298 1.8556e-01 insignificant 1.00000000 insignificant chr1 208532824 208533824 12414 ENSG00000213038 0.50693 50 2 0.28456 104 4 0.26429 77 5 0.56071 76 2 0.26190 68 4 0.50410 55 4 0.55217 69 4 0.33357 77 5 0.32381 64 5 0.41667 98 5 0.51772 144 5 0.47400 63 4 0.46670 88 5 0.58772 44 3 0.34724 90 4 0.0089286 68 4 0.27190 48 2 0.22115 110 2 0.32141 103 4 0.34444 29 3 0.18750 11 0 0.55583 74 4 0.23333 29 4 0.41700 81 3 0.25294 38 2 0.48431 141 5 0.20000 76 3 0.52857 21 2 0.50713 61 3 0.47036 163 5 0.39016 128 5 0.46190 27 4 0.000000 89 5 0.1590909 70 4 0.0023256 186 5 0.00000 8 0 0.12381 110 4 0.0107143 148 5 0.383333 35 2 0.55385 61 3 0.33929 62 2 0.38636 25 2 0.44321 77 3 0.51819 0.38116 0.27180 0.68590 0.41558 0.39220 0.54884 0.32207 0.26531 0.53463 0.51868 0.42814 0.42138 0.45402 0.38875 0.0069573 0.35164 0.29870 0.32994 0.33261 0.14630 0.45783 0.20130 0.55838 0.42704 0.56858 0.30909 0.53432 0.48678 0.56533 0.42039 0.24638 0.000000 0.034042 0.0039263 0.000000 0.098949 0.0180891 0.47013 0.55844 0.45826 0.52184 0.47221 2 0.39213 0.53059 -0.0553529 4 0.49402 0.52176 -0.0277426 0.94487 1.4475e-01 lowCoverage 1 1.0000000 lowCoverage 0.66785 0.50108969 lowCoverage 1 1.00000 lowCoverage -0.0122554 0.8110763 lowCoverage 1 lowCoverage 0.39173 0.018003 0.424239 4 0.39282 0.026450 0.366370 3.6986e-15 0.9999250 lowCoverage 2.4658e-13 1 lowCoverage 3.7090e-07 0.9999981 lowCoverage 3.7090e-05 1 lowCoverage 0.3291735 6.9148e-07 lowCoverage 1.1525e-04 lowCoverage 0.37587 0.56154 -0.05131661 2 0.32334 0.43734 -0.11400133 9.6314e-01 0.00047716 lowCoverage 1.0000e+00 0.23858 lowCoverage 9.7721e-01 0.1138013 lowCoverage 1.0000e+00 1 lowCoverage -0.0427104 4.0312e-01 lowCoverage 1.00000000 lowCoverage 0.53004 0.018003 0.511157 5 0.42611 0.026450 0.399661 4.4156e-16 0.999996 hypermethylated 3.6797e-14 1 hypermethylated 4.5433e-06 0.99762 hypermethylated 3.4962e-04 1 hypermethylated 0.3414289 3.3992e-06 lowCoverage 4.2490e-04 lowCoverage 0.52350 0.56154 0.0131640 2 0.38505 0.43734 -0.0522949 7.3077e-01 0.16653 lowCoverage 1.0000e+00 1 lowCoverage 9.3251e-01 0.32905 lowCoverage 1.000000 1 lowCoverage -0.0304550 0.5820435 lowCoverage 1.00000 lowCoverage 0.016304 0.56154 -0.5469856 2 0.024588 0.43734 -0.412755 0.999998 1.3271e-14 lowCoverage 1 3.3176e-12 lowCoverage 0.999552 1.5833e-04 lowCoverage 1 1.5833e-02 lowCoverage -0.371884 4.7079e-05 lowCoverage 0.01176965 lowCoverage chr1 210481787 210482787 12474 ENSG00000208192 0.91630 90 3 0.73169 197 5 0.79942 94 4 0.95098 91 4 0.94762 77 5 0.88260 227 5 0.79866 103 5 0.75267 150 4 0.80691 107 4 0.91587 77 4 0.89377 144 5 0.88889 58 2 0.90614 138 3 0.85119 25 1 0.92183 117 4 0.9868421 39 2 0.88542 531 4 0.91928 92 3 0.93619 100 4 0.91948 101 4 0.76865 47 4 0.85833 36 2 0.94237 111 5 0.98148 52 4 0.98667 22 1 0.94199 170 5 0.90278 33 3 0.65055 48 3 0.92437 112 4 0.80865 198 5 0.93739 179 5 0.76225 150 5 0.684745 175 5 0.8610401 100 5 0.6575397 84 4 0.90000 20 2 0.64503 79 5 0.7571518 186 5 0.913589 67 5 0.90017 74 5 0.87923 67 3 0.88393 35 1 0.85158 78 3 0.89637 0.81748 0.81746 0.95367 0.95392 0.87137 0.63107 0.85663 0.79510 0.89759 0.87384 0.94265 0.87340 0.86723 0.90151 0.9906621 0.87809 0.87950 0.88756 0.89772 0.87757 0.76570 0.91948 0.97760 0.95731 0.89097 0.77957 0.85908 0.86064 0.94757 0.89181 0.88601 0.687306 0.877836 0.6468467 0.790323 0.871310 0.5832638 0.88103 0.83080 0.88733 0.80530 0.79202 1 0.89562 0.91161 -0.0308246 4 0.88071 0.84405 0.0366601 0.69157 2.7400e-02 lowCoverage 1 1.0000000 lowCoverage 0.87657 0.01582022 lowCoverage 1 1.00000 lowCoverage 0.0084629 0.8049483 lowCoverage 1 lowCoverage 0.89562 0.790373 0.088605 5 0.88071 0.667191 0.213516 2.5155e-04 0.9716947 weaklyHypermeth 6.6198e-03 1 weaklyHypermeth 8.4057e-02 0.9077059 insignificant 1.0000e+00 1 insignificant 0.1296690 3.1086e-02 lowCoverage 9.4200e-01 lowCoverage 0.89670 0.81308 0.05668417 4 0.90572 0.87323 0.03248462 4.7810e-04 0.43880556 lowCoverage 2.8124e-02 1.00000 lowCoverage 2.0962e-01 0.2365812 lowCoverage 1.0000e+00 1 lowCoverage -0.0051121 7.8653e-01 lowCoverage 1.00000000 lowCoverage 0.91161 0.790373 0.123720 4 0.84405 0.667191 0.176856 1.8624e-05 0.999870 lowCoverage 6.2081e-04 1 lowCoverage 9.4802e-03 0.99998 lowCoverage 2.9626e-01 1 lowCoverage 0.1212061 4.7483e-02 lowCoverage 1.0000e+00 lowCoverage 0.91426 0.81308 0.0758398 3 0.92833 0.87323 0.0550999 1.0947e-03 0.95275 lowCoverage 5.4734e-02 1 lowCoverage 2.9726e-02 0.74627 lowCoverage 1.000000 1 lowCoverage -0.0135750 0.6762136 lowCoverage 1.00000 lowCoverage 0.795276 0.81308 -0.0820294 4 0.819782 0.87323 -0.053450 0.829469 2.0734e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.939988 1.5353e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.134781 2.7562e-02 lowCoverage 1.00000000 lowCoverage chr1 210482174 210483174 12475 ENSG00000208192 0.91630 90 3 0.73169 197 5 0.79942 94 4 0.95098 91 4 0.94762 77 5 0.88260 227 5 0.79866 103 5 0.75267 150 4 0.80691 107 4 0.91587 77 4 0.89377 144 5 0.88889 58 2 0.90614 138 3 0.85119 25 1 0.92183 117 4 0.9868421 39 2 0.88542 531 4 0.91928 92 3 0.93619 100 4 0.91948 101 4 0.76865 47 4 0.85833 36 2 0.94237 111 5 0.98148 52 4 0.98667 22 1 0.94199 170 5 0.90278 33 3 0.65055 48 3 0.92437 112 4 0.80865 198 5 0.93739 179 5 0.76225 150 5 0.684745 175 5 0.8610401 100 5 0.6575397 84 4 0.90000 20 2 0.64503 79 5 0.7571518 186 5 0.913589 67 5 0.90017 74 5 0.87923 67 3 0.88393 35 1 0.85158 78 3 0.89637 0.81748 0.81746 0.95367 0.95392 0.87137 0.63107 0.85663 0.79510 0.89759 0.87384 0.94265 0.87340 0.86723 0.90151 0.9906621 0.87809 0.87950 0.88756 0.89772 0.87757 0.76570 0.91948 0.97760 0.95731 0.89097 0.77957 0.85908 0.86064 0.94757 0.89181 0.88601 0.687306 0.877836 0.6468467 0.790323 0.871310 0.5832638 0.88103 0.83080 0.88733 0.80530 0.79202 1 0.89562 0.91161 -0.0308246 4 0.88071 0.84405 0.0366601 0.69157 2.7400e-02 lowCoverage 1 1.0000000 lowCoverage 0.87657 0.01582022 lowCoverage 1 1.00000 lowCoverage 0.0084629 0.8049483 lowCoverage 1 lowCoverage 0.89562 0.790373 0.088605 5 0.88071 0.667191 0.213516 2.5155e-04 0.9716947 weaklyHypermeth 6.6198e-03 1 weaklyHypermeth 8.4057e-02 0.9077059 insignificant 1.0000e+00 1 insignificant 0.1296690 3.1086e-02 lowCoverage 9.4200e-01 lowCoverage 0.89670 0.81308 0.05668417 4 0.90572 0.87323 0.03248462 4.7810e-04 0.43880556 lowCoverage 2.8124e-02 1.00000 lowCoverage 2.0962e-01 0.2365812 lowCoverage 1.0000e+00 1 lowCoverage -0.0051121 7.8653e-01 lowCoverage 1.00000000 lowCoverage 0.91161 0.790373 0.123720 4 0.84405 0.667191 0.176856 1.8624e-05 0.999870 lowCoverage 6.2081e-04 1 lowCoverage 9.4802e-03 0.99998 lowCoverage 2.9626e-01 1 lowCoverage 0.1212061 4.7483e-02 lowCoverage 1.0000e+00 lowCoverage 0.91426 0.81308 0.0758398 3 0.92833 0.87323 0.0550999 1.0947e-03 0.95275 lowCoverage 5.4734e-02 1 lowCoverage 2.9726e-02 0.74627 lowCoverage 1.000000 1 lowCoverage -0.0135750 0.6762136 lowCoverage 1.00000 lowCoverage 0.795276 0.81308 -0.0820294 4 0.819782 0.87323 -0.053450 0.829469 2.0734e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.939988 1.5353e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.134781 2.7562e-02 lowCoverage 1.00000000 lowCoverage chr1 211658072 211659072 12530 RPS6KC1 ENSG00000136643 0.62294 60 4 0.65690 88 6 0.63908 91 6 0.74271 86 4 0.68221 50 6 0.81512 223 4 0.63380 82 4 0.72689 98 6 0.57126 129 6 0.64954 56 3 0.76970 80 6 0.62939 83 6 0.58395 130 6 0.72500 44 4 0.79206 63 4 0.3555556 38 4 0.70139 31 2 0.59408 106 4 0.85694 63 6 0.64992 102 4 0.68750 19 2 0.53704 27 2 0.41049 52 2 0.57185 73 5 0.90278 20 2 0.61911 107 6 0.85130 98 6 0.65963 65 4 0.59188 76 6 0.77445 108 6 0.78614 97 6 0.86236 101 5 0.165233 62 2 0.1463652 98 6 0.0909091 173 4 0.18333 12 1 0.11019 111 4 0.5625902 82 6 0.618056 74 4 0.49517 114 4 0.39819 93 4 0.32510 85 4 0.36792 84 4 0.69036 0.62927 0.69274 0.74081 0.65051 0.72607 0.68678 0.71678 0.59625 0.63688 0.74859 0.70378 0.63568 0.71880 0.75934 0.5008547 0.56517 0.60222 0.90171 0.58759 0.87834 0.61681 0.39333 0.59612 0.82479 0.64682 0.83800 0.69390 0.62229 0.72982 0.79219 0.83670 0.289154 0.162244 0.2259903 0.201709 0.173362 0.6613387 0.60114 0.73669 0.59114 0.50952 0.54532 1 0.67821 0.72598 -0.0514709 6 0.66666 0.71958 -0.0529180 0.99751 5.1243e-02 insignificant 1 1.0000000 insignificant 0.90966 0.31402372 insignificant 1 1.00000 insignificant -0.0179540 0.7219812 lowCoverage 1 lowCoverage 0.67821 0.234201 0.421750 6 0.66666 0.198545 0.468116 1.9596e-24 1.0000000 hypermethylated 2.7994e-22 1 hypermethylated 1.5084e-09 1.0000000 hypermethylated 2.8754e-07 1 hypermethylated 0.4601529 8.2048e-04 lowCoverage 4.5582e-02 lowCoverage 0.67821 0.59111 0.09639143 4 0.66666 0.40560 0.26106315 3.0000e-09 0.99998536 lowCoverage 7.5001e-07 1.00000 lowCoverage 2.0782e-05 0.9999894 lowCoverage 5.1955e-03 1 lowCoverage 0.2290369 7.8089e-03 lowCoverage 0.97611586 lowCoverage 0.72598 0.234201 0.484393 6 0.71958 0.198545 0.521034 1.0758e-19 1.000000 hypermethylated 9.7800e-18 1 hypermethylated 3.0604e-08 1.00000 hypermethylated 7.6509e-06 1 hypermethylated 0.4781069 3.2726e-04 lowCoverage 1.9251e-02 lowCoverage 0.72598 0.59111 0.1510241 4 0.71958 0.40560 0.3139811 6.3639e-10 1.00000 lowCoverage 1.5910e-07 1 lowCoverage 2.0072e-05 1.00000 lowCoverage 0.010036 1 lowCoverage 0.2469909 0.0048319 lowCoverage 0.87034 lowCoverage 0.234201 0.59111 -0.3105046 4 0.198545 0.40560 -0.207053 0.830864 2.6498e-05 lowCoverage 1 1.5490e-03 lowCoverage 0.686791 3.6447e-03 lowCoverage 1 2.0248e-01 lowCoverage -0.231116 2.9759e-02 lowCoverage 1.00000000 lowCoverage chr1 212145144 212146144 12623 ENSG00000221026 0.89058 197 6 0.75933 153 9 0.70997 124 6 0.91276 111 6 0.55395 93 5 0.80412 326 8 0.59526 130 5 0.82103 127 8 0.75920 105 6 0.73544 107 6 0.78722 187 8 0.59903 89 4 0.65678 130 6 0.88509 42 2 0.57579 177 6 0.5773810 70 3 0.50000 23 1 0.69626 124 6 0.81193 192 6 0.85316 210 6 0.74707 86 5 0.79543 94 6 0.79500 128 7 0.80919 91 7 0.77524 81 4 0.83415 170 8 0.78547 148 7 0.64085 93 7 0.58744 160 4 0.85680 189 9 0.89745 190 7 0.64358 257 6 0.016599 182 9 0.0044444 150 8 0.2485876 279 9 0.20811 81 8 0.08298 184 7 0.0621961 297 9 0.787275 226 6 0.81700 187 6 0.90285 162 8 0.89194 149 6 0.88103 193 6 0.87810 0.72470 0.77366 0.91011 0.80379 0.84544 0.77021 0.83854 0.75913 0.82384 0.77352 0.74682 0.75661 0.78729 0.71513 0.6605253 0.62463 0.82454 0.79797 0.90246 0.78232 0.81032 0.90198 0.75766 0.86848 0.91612 0.78492 0.78589 0.78069 0.94828 0.87821 0.86911 0.017893 0.010317 0.1683481 0.241103 0.181790 0.0153762 0.81470 0.82681 0.83172 0.87060 0.96263 3 0.78432 0.84766 -0.0442547 6 0.72589 0.80851 -0.0826253 0.91227 8.4670e-03 weaklyHypometh 1 1.0000000 insignificant 0.91312 0.00422799 weaklyHypometh 1 0.89997 insignificant -0.0397591 0.3157232 insignificant 1 insignificant 0.78453 0.083546 0.698447 6 0.74847 0.094551 0.653923 3.5987e-64 1.0000000 hypermethylated 1.7993e-61 1 hypermethylated 5.3066e-19 0.9999995 hypermethylated 5.3066e-16 1 hypermethylated 0.6203925 2.0501e-07 hypermethylated 5.1253e-05 hypermethylated 0.78432 0.88004 -0.06677327 6 0.72589 0.77360 -0.04771189 7.1079e-01 0.00148682 weaklyHypometh 1.0000e+00 0.49561 insignificant 9.8006e-01 0.0054011 weaklyHypometh 1.0000e+00 1 insignificant -0.1318056 1.9445e-03 weaklyHypometh 0.38889664 insignificant 0.84748 0.083546 0.761349 8 0.78936 0.094551 0.694811 5.4074e-49 1.000000 hypermethylated 5.4074e-46 1 hypermethylated 8.0523e-17 1.00000 hypermethylated 8.0523e-14 1 hypermethylated 0.6601516 1.9937e-07 hypermethylated 6.6457e-05 hypermethylated 0.84766 0.88004 -0.0087466 6 0.80851 0.77360 0.0349134 3.3490e-01 0.25970 insignificant 1.0000e+00 1 insignificant 2.5960e-01 0.17983 insignificant 1.000000 1 insignificant -0.0920465 0.0214427 weaklyHypometh 1.00000 insignificant 0.083546 0.88100 -0.7753631 6 0.094551 0.85096 -0.756406 1.000000 2.3557e-26 hypomethylated 1 2.3557e-23 hypomethylated 1.000000 2.4046e-11 hypomethylated 1 2.4046e-08 hypomethylated -0.752198 4.1019e-07 hypomethylated 0.00041019 hypomethylated chr1 212351033 212352033 12692 ENSG00000215936 0.89761 207 6 0.75733 99 5 0.87861 123 6 0.95751 149 3 0.93865 66 6 0.90449 365 7 0.92564 83 5 0.90434 114 7 0.88416 72 4 0.91920 66 3 0.94668 212 7 0.94524 77 5 0.92240 113 6 0.91111 20 1 0.89158 93 3 0.6057692 25 2 0.90000 13 1 0.87989 150 4 0.95092 65 4 0.93222 204 6 0.98701 42 3 0.84300 96 4 0.90507 98 4 0.87255 77 6 0.97917 34 3 0.90045 153 7 0.73909 80 4 0.88095 54 3 0.92431 49 3 0.93768 159 6 0.89663 139 7 0.88066 243 7 0.716956 96 6 0.8273810 52 2 0.8037908 205 6 0.90179 36 4 0.68224 102 6 0.6698026 99 4 0.879752 189 6 0.95142 172 3 0.95427 140 3 0.85606 151 3 0.80162 172 4 0.89551 0.85396 0.85885 0.92237 0.94233 0.92678 0.92765 0.86694 0.80827 0.89850 0.94904 0.89290 0.92583 0.83971 0.92309 0.6973138 0.83292 0.88967 0.92993 0.90898 0.98204 0.88926 0.86994 0.94783 0.95602 0.87858 0.82528 0.80350 0.86543 0.92221 0.88171 0.90677 0.874580 0.895833 0.9217623 0.849316 0.883659 0.8546847 0.90620 0.91073 0.92066 0.83925 0.85943 3 0.90155 0.88480 0.0160458 6 0.90494 0.88499 0.0199455 0.23851 9.8164e-01 insignificant 1 1.0000000 insignificant 0.69624 0.73021109 insignificant 1 1.00000 insignificant -0.0028799 0.9122311 lowCoverage 1 lowCoverage 0.90155 0.813559 0.081207 6 0.90494 0.757886 0.147052 1.7415e-07 0.7939316 weaklyHypermeth 5.6178e-06 1 weaklyHypermeth 5.8939e-03 0.6540856 weaklyHypermeth 1.9012e-01 1 insignificant 0.1256750 1.8030e-02 lowCoverage 6.3232e-01 lowCoverage 0.90155 0.90170 0.00656600 4 0.90494 0.88633 0.01860321 2.4179e-01 0.61216280 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.7696e-01 0.5182013 lowCoverage 1.0000e+00 1 lowCoverage 0.0040417 9.0900e-01 lowCoverage 1.00000000 lowCoverage 0.88480 0.813559 0.048389 6 0.88499 0.757886 0.127106 2.4887e-04 0.626740 weaklyHypermeth 6.9130e-03 1 weaklyHypermeth 2.8556e-02 0.79179 weaklyHypermeth 7.7179e-01 1 insignificant 0.1285549 1.6529e-02 lowCoverage 6.1220e-01 lowCoverage 0.88480 0.90170 -0.0080380 4 0.88499 0.88633 -0.0013423 6.7126e-01 0.37289 lowCoverage 1.0000e+00 1 lowCoverage 5.7336e-01 0.59875 lowCoverage 1.000000 1 lowCoverage 0.0069217 0.8468375 lowCoverage 1.00000 lowCoverage 0.813559 0.90170 -0.0097797 4 0.757886 0.88633 -0.128449 0.566802 1.0061e-02 lowCoverage 1 3.0487e-01 lowCoverage 0.439576 3.9785e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.121633 3.1157e-02 lowCoverage 1.00000000 lowCoverage chr1 212351534 212352534 12693 ENSG00000215936 0.89761 207 6 0.75733 99 5 0.87861 123 6 0.95751 149 3 0.93865 66 6 0.90449 365 7 0.92564 83 5 0.90434 114 7 0.88416 72 4 0.91920 66 3 0.94668 212 7 0.94524 77 5 0.92240 113 6 0.91111 20 1 0.89158 93 3 0.6057692 25 2 0.90000 13 1 0.87989 150 4 0.95092 65 4 0.93222 204 6 0.98701 42 3 0.84300 96 4 0.90507 98 4 0.87255 77 6 0.97917 34 3 0.90045 153 7 0.73909 80 4 0.88095 54 3 0.92431 49 3 0.93768 159 6 0.89663 139 7 0.88066 243 7 0.716956 96 6 0.8273810 52 2 0.8037908 205 6 0.90179 36 4 0.68224 102 6 0.6698026 99 4 0.879752 189 6 0.95142 172 3 0.95427 140 3 0.85606 151 3 0.80162 172 4 0.89551 0.85396 0.85885 0.92237 0.94233 0.92678 0.92765 0.86694 0.80827 0.89850 0.94904 0.89290 0.92583 0.83971 0.92309 0.6973138 0.83292 0.88967 0.92993 0.90898 0.98204 0.88926 0.86994 0.94783 0.95602 0.87858 0.82528 0.80350 0.86543 0.92221 0.88171 0.90677 0.874580 0.895833 0.9217623 0.849316 0.883659 0.8546847 0.90620 0.91073 0.92066 0.83925 0.85943 3 0.90155 0.88480 0.0160458 6 0.90494 0.88499 0.0199455 0.23851 9.8164e-01 insignificant 1 1.0000000 insignificant 0.69624 0.73021109 insignificant 1 1.00000 insignificant -0.0028799 0.9122311 lowCoverage 1 lowCoverage 0.90155 0.813559 0.081207 6 0.90494 0.757886 0.147052 1.7415e-07 0.7939316 weaklyHypermeth 5.6178e-06 1 weaklyHypermeth 5.8939e-03 0.6540856 weaklyHypermeth 1.9012e-01 1 insignificant 0.1256750 1.8030e-02 lowCoverage 6.3232e-01 lowCoverage 0.90155 0.90170 0.00656600 4 0.90494 0.88633 0.01860321 2.4179e-01 0.61216280 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.7696e-01 0.5182013 lowCoverage 1.0000e+00 1 lowCoverage 0.0040417 9.0900e-01 lowCoverage 1.00000000 lowCoverage 0.88480 0.813559 0.048389 6 0.88499 0.757886 0.127106 2.4887e-04 0.626740 weaklyHypermeth 6.9130e-03 1 weaklyHypermeth 2.8556e-02 0.79179 weaklyHypermeth 7.7179e-01 1 insignificant 0.1285549 1.6529e-02 lowCoverage 6.1220e-01 lowCoverage 0.88480 0.90170 -0.0080380 4 0.88499 0.88633 -0.0013423 6.7126e-01 0.37289 lowCoverage 1.0000e+00 1 lowCoverage 5.7336e-01 0.59875 lowCoverage 1.000000 1 lowCoverage 0.0069217 0.8468375 lowCoverage 1.00000 lowCoverage 0.813559 0.90170 -0.0097797 4 0.757886 0.88633 -0.128449 0.566802 1.0061e-02 lowCoverage 1 3.0487e-01 lowCoverage 0.439576 3.9785e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.121633 3.1157e-02 lowCoverage 1.00000000 lowCoverage chr1 212604431 212605431 12720 SMYD2 ENSG00000143499 0.96964 321 7 0.89122 209 7 0.83197 165 7 0.99122 250 4 0.95170 67 7 0.87057 267 7 0.91906 168 7 0.91703 163 5 0.88311 136 7 0.95483 138 7 0.92261 246 7 0.85440 78 7 0.97941 196 7 NA 0 0 0.95083 145 7 0.7564935 36 2 0.86848 45 6 0.94804 197 7 0.96644 122 7 0.87678 176 6 0.88413 40 5 0.95885 92 4 0.91709 183 7 0.92725 117 7 0.94218 55 4 0.90505 259 7 0.85145 83 7 0.99107 74 5 0.99481 203 5 0.94050 282 7 0.91629 276 7 0.94368 243 7 0.473246 181 7 0.0347826 117 7 0.1395349 254 4 0.12472 35 4 0.16964 74 5 0.3446880 294 7 0.915223 268 7 0.94935 259 7 0.96037 265 7 0.88130 237 7 0.90502 189 4 0.94936 0.88217 0.82434 0.98684 0.91883 0.85416 0.94209 0.89234 0.87464 0.95570 0.89693 0.77298 0.97638 NA 0.93038 0.6463869 0.77485 0.92166 0.94902 0.86084 0.82632 0.92989 0.90968 0.92849 0.90110 0.92987 0.79990 0.99038 0.99105 0.92768 0.95522 0.93933 0.485353 0.016856 0.1522141 0.173871 0.168333 0.2217585 0.93576 0.95100 0.93497 0.83100 0.94733 4 0.92096 0.93917 -0.0186571 7 0.93006 0.93846 -0.0084002 0.60002 6.3941e-02 insignificant 1 1.0000000 insignificant 0.91018 0.10101168 insignificant 1 1.00000 insignificant -0.0203020 0.2697798 insignificant 1 insignificant 0.92096 0.206283 0.705311 7 0.93006 0.272492 0.657566 7.8275e-65 1.0000000 hypermethylated 7.8275e-62 1 hypermethylated 2.5283e-18 1.0000000 hypermethylated 1.2642e-15 1 hypermethylated 0.6962921 9.1754e-05 hypermethylated 7.6461e-03 hypermethylated 0.92096 0.91954 -0.00023116 7 0.93006 0.92633 0.00372878 6.1528e-01 0.74167271 insignificant 1.0000e+00 1.00000 insignificant 7.8697e-01 0.5139808 insignificant 1.0000e+00 1 insignificant -0.0115260 5.7321e-01 insignificant 1.00000000 insignificant 0.93917 0.206283 0.727185 7 0.93846 0.272492 0.665966 2.5247e-46 1.000000 hypermethylated 1.2623e-43 1 hypermethylated 4.8691e-16 1.00000 hypermethylated 2.4345e-13 1 hypermethylated 0.7165941 8.7137e-05 hypermethylated 7.2614e-03 hypermethylated 0.93917 0.91954 0.0188014 7 0.93846 0.92633 0.0121290 1.0347e-01 0.66369 insignificant 1.0000e+00 1 insignificant 3.0034e-01 0.83910 insignificant 1.000000 1 insignificant 0.0087759 0.6496950 insignificant 1.00000 insignificant 0.206283 0.91954 -0.7122813 7 0.272492 0.92633 -0.653837 1.000000 1.9541e-21 hypomethylated 1 9.7703e-19 hypomethylated 1.000000 1.6653e-10 hypomethylated 1 8.3263e-08 hypomethylated -0.707818 8.1121e-05 hypomethylated 0.01352015 hypomethylated chr1 215234511 215235511 13064 ESRRG ENSG00000196482 0.81268 299 9 0.69576 163 7 0.77594 117 7 0.82596 275 9 0.72575 32 3 0.81693 253 8 0.92000 32 3 0.85034 45 4 0.65278 41 4 0.92063 46 5 0.91110 100 5 0.75000 11 0 0.73260 67 4 NA 0 0 0.78274 47 4 0.38333 12 0 0.85714 14 0 0.77747 285 9 0.86532 63 5 0.82576 237 9 1.00000 19 1 0.86751 71 5 0.74737 140 8 0.76435 47 5 0.74286 43 5 0.82241 174 9 0.83016 63 5 0.75000 11 0 0.65803 74 5 0.86801 195 9 0.79556 178 8 0.80905 363 9 0.700340 179 9 0.687816 65 5 0.70872 185 9 0.77721 30 3 0.73108 45 4 0.750103 188 9 0.87141 182 8 0.85435 301 9 0.83068 237 8 0.85230 248 9 0.88610 217 8 0.82300 0.85237 0.90009 0.87219 0.81271 0.83769 0.91336 0.82373 0.75932 0.90143 0.93389 0.84993 0.89909 NA 0.94926 0.54394 0.82258 0.85331 0.85278 0.86322 0.99892 0.83578 0.75178 0.90366 0.82581 0.94137 0.85826 0.87795 0.81124 0.94700 0.83705 0.88155 0.704529 0.671684 0.76306 0.82873 0.788934 0.815712 0.87403 0.87861 0.85637 0.84685 0.91711 0 0.82702 0.81132 0.0027297 8 0.72094 0.77050 -0.049556 0.64757 0.4690174 insignificant 1 1 insignificant 0.73120 0.421243 insignificant 1 1 insignificant -0.0213323 0.572024 lowCoverage 1 lowCoverage 0.82818 0.723988 0.090402 8 0.80105 0.720536 0.080512 1.3666e-06 0.99971 weaklyHypermeth 7.5923e-05 1 weaklyHypermeth 6.3325e-04 0.99999 weaklyHypermeth 5.2771e-02 1 weaklyHypermeth 0.057397 7.8536e-02 lowCoverage 1.0000e+00 lowCoverage 0.82702 0.85316 -0.0347249 8 0.72094 0.86754 -0.14659275 9.9737e-01 0.010080 weaklyHypometh 1.0000e+00 1 insignificant 9.6729e-01 0.053300 insignificant 1.0000e+00 1 insignificant -0.0756943 1.8038e-02 lowCoverage 1.000000 lowCoverage 0.81177 0.723988 0.078188 9 0.80055 0.72054 0.080019 3.1249e-05 0.99947 weaklyHypermeth 1.6447e-03 1 weaklyHypermeth 1.6164e-03 0.99995 weaklyHypermeth 1.2434e-01 1 insignificant 0.078729 1.3411e-02 weaklyHypermeth 7.4503e-01 insignificant 0.81132 0.85316 -0.0462867 8 0.77050 0.86754 -0.0970363 9.9692e-01 4.6122e-05 weaklyHypometh 1.0000e+00 0.046122 weaklyHypometh 9.9468e-01 0.016481 weaklyHypometh 1.0000e+00 1 insignificant -0.0543620 0.05912879 insignificant 1.00000 insignificant 0.723988 0.85304 -0.1256830 8 0.72054 0.85282 -0.132282 0.999999 2.7038e-07 weaklyHypometh 1 5.4077e-05 weaklyHypometh 1.00000 2.3850e-05 weaklyHypometh 1 5.9626e-03 weaklyHypometh -0.133091 3.1510e-05 weaklyHypometh 1.0503e-02 weaklyHypometh chr1 216030559 216031559 13201 SPATA17 ENSG00000162814 0.63952 192 7 0.62707 150 7 0.62506 101 7 0.71865 135 7 0.68823 81 7 0.70922 255 7 0.64854 85 7 0.71572 127 7 0.54765 74 7 0.70006 78 4 0.76483 200 7 0.63571 49 3 0.71435 119 7 0.68571 48 6 0.79420 66 7 0.64286 56 2 0.43182 34 2 0.68251 159 7 0.77334 132 7 0.72764 156 7 0.75253 40 3 0.69963 58 4 0.72204 98 7 0.58095 42 3 0.87619 39 5 0.71969 131 7 0.58012 84 3 0.55000 23 2 0.70369 97 7 0.77846 173 7 0.67385 113 7 0.58543 286 7 0.582959 77 7 0.534848 88 7 0.63662 128 7 0.61688 29 2 0.67517 54 2 0.710609 167 7 0.66759 171 7 0.73665 182 7 0.75026 159 7 0.67771 132 7 0.75500 199 7 0.68775 0.64246 0.66173 0.69887 0.68658 0.71537 0.68820 0.71020 0.59447 0.74914 0.77267 0.68902 0.70822 0.66093 0.74001 0.62483 0.47254 0.70037 0.76013 0.72590 0.71002 0.72130 0.68335 0.64778 0.88613 0.72308 0.61713 0.74378 0.69894 0.69558 0.69559 0.70760 0.648980 0.565804 0.61538 0.59249 0.678984 0.705156 0.71113 0.74627 0.74275 0.68070 0.74488 2 0.70514 0.70946 0.0013391 7 0.70959 0.69566 0.013934 0.71404 0.8958885 insignificant 1 1 insignificant 0.93001 0.512785 insignificant 1 1 insignificant -0.0115791 0.732239 insignificant 1 insignificant 0.70480 0.659300 0.060163 7 0.68650 0.634221 0.052281 8.7480e-04 0.99825 weaklyHypermeth 3.3646e-02 1 weaklyHypermeth 5.0235e-03 0.94996 weaklyHypermeth 3.3490e-01 1 insignificant 0.047455 1.6225e-01 insignificant 1.0000e+00 insignificant 0.70480 0.70581 -0.0335251 7 0.68650 0.72962 -0.04311596 9.5905e-01 0.119747 insignificant 1.0000e+00 1 insignificant 9.5291e-01 0.098143 insignificant 1.0000e+00 1 insignificant -0.0438050 1.1684e-01 insignificant 1.000000 insignificant 0.70954 0.659300 0.059511 7 0.68841 0.63422 0.054194 1.3571e-03 0.99544 weaklyHypermeth 5.9004e-02 1 weaklyHypermeth 3.6233e-03 0.99795 weaklyHypermeth 2.4155e-01 1 insignificant 0.059034 1.4197e-01 insignificant 1.0000e+00 insignificant 0.70954 0.70581 -0.0358945 7 0.68841 0.72962 -0.0412024 8.0091e-01 9.9081e-02 insignificant 1.0000e+00 1.000000 insignificant 5.7654e-01 0.492469 insignificant 1.0000e+00 1 insignificant -0.0322258 0.35240835 insignificant 1.00000 insignificant 0.659300 0.70581 -0.0963708 7 0.63422 0.72962 -0.095397 0.999975 7.2348e-04 weaklyHypometh 1 4.5218e-02 weaklyHypometh 0.99979 2.1909e-03 weaklyHypometh 1 1.5649e-01 insignificant -0.091260 1.9230e-02 weaklyHypometh 1.0000e+00 insignificant chr1 226289983 226290983 13673 WNT3A ENSG00000154342 0.83754 101 6 0.66691 354 6 0.77720 102 4 0.71421 192 6 0.68159 98 6 0.55556 458 6 0.70757 239 6 0.69612 171 6 0.66575 137 6 0.55408 78 6 0.73839 251 6 0.69087 68 6 0.58073 161 6 0.95079 61 3 0.74258 138 6 0.57667 53 4 0.26667 13 2 0.70535 176 6 0.54139 250 6 0.60275 179 6 0.83269 50 4 0.55366 75 6 0.67910 119 6 0.57366 102 6 0.74501 86 6 0.73466 297 6 0.74341 116 6 0.71886 60 4 0.61620 274 6 0.76377 367 6 0.68463 279 6 0.59586 224 6 0.589215 226 6 0.536496 100 4 0.28881 141 3 0.51111 17 3 0.61442 139 6 0.509823 299 4 0.57793 230 6 0.63002 148 6 0.64420 135 6 0.55557 191 6 0.64495 165 6 0.84811 0.74354 0.80678 0.73577 0.79072 0.75923 0.77833 0.78293 0.70696 0.77973 0.81051 0.75136 0.71701 0.86090 0.77833 0.67854 0.70478 0.75590 0.63309 0.71561 0.76140 0.68420 0.81102 0.64131 0.78928 0.81573 0.80425 0.93435 0.76746 0.83934 0.76889 0.78486 0.520471 0.424890 0.13392 0.42829 0.661944 0.553807 0.69413 0.73355 0.72143 0.71005 0.77968 3 0.76494 0.79590 -0.0379747 6 0.57574 0.61852 -0.042777 0.99982 0.0868225 insignificant 1 1 insignificant 0.99951 0.116977 insignificant 1 1 insignificant -0.0241564 0.545555 insignificant 1 insignificant 0.76494 0.481562 0.291662 4 0.57574 0.536121 0.039622 1.1749e-09 0.40788 lowCoverage 9.7912e-08 1 lowCoverage 7.1799e-07 0.57003 lowCoverage 1.1967e-04 1 lowCoverage 0.154325 2.1414e-02 lowCoverage 1.0000e+00 lowCoverage 0.76541 0.71116 0.0156176 6 0.67170 0.60776 0.06393497 6.8053e-03 0.569919 weaklyHypermeth 7.5615e-01 1 insignificant 4.4700e-02 0.710727 weaklyHypermeth 1.0000e+00 1 insignificant 0.0521009 1.6063e-01 insignificant 1.000000 insignificant 0.79590 0.481562 0.327843 4 0.61852 0.53612 0.082399 7.1942e-08 0.56005 lowCoverage 7.1942e-06 1 lowCoverage 2.4486e-06 0.82876 lowCoverage 4.0809e-04 1 lowCoverage 0.178481 1.0345e-02 lowCoverage 6.0853e-01 lowCoverage 0.79707 0.71116 0.0607584 6 0.72161 0.60776 0.1138416 2.0012e-03 9.6263e-01 weaklyHypermeth 3.3354e-01 1.000000 insignificant 1.2116e-02 0.878923 weaklyHypermeth 1.0000e+00 1 insignificant 0.0762573 0.02651259 weaklyHypermeth 1.00000 insignificant 0.481522 0.71116 -0.2790880 4 0.54214 0.60776 -0.065624 0.046537 3.1280e-03 lowCoverage 1 1.4895e-01 lowCoverage 0.14369 1.1300e-03 lowCoverage 1 1.0370e-01 lowCoverage -0.102224 8.6798e-02 lowCoverage 1.0000e+00 lowCoverage chr1 232940011 232941011 13767 IRF2BP2 ENSG00000168264 0.78143 172 5 0.70289 259 5 0.75362 124 5 0.77884 151 5 0.74533 68 4 0.67052 330 5 0.46696 150 5 0.59291 145 5 0.61186 123 5 0.79743 130 6 0.78775 287 5 0.79940 76 5 0.84443 150 5 0.74801 41 3 0.72147 116 5 0.65960 49 5 0.57029 391 6 0.75564 166 5 0.81119 220 5 0.73334 331 7 0.63655 76 5 0.66081 89 5 0.76313 124 5 0.61019 116 5 0.80680 81 4 0.62849 335 5 0.70980 77 4 0.68776 57 4 0.82954 203 5 0.79577 336 6 0.80405 346 5 0.64586 349 7 0.692030 163 5 0.717823 123 5 0.71894 271 5 0.64852 69 4 0.67097 115 5 0.645149 340 7 0.73267 190 5 0.66142 141 5 0.81613 174 5 0.73699 183 5 0.65476 161 5 0.71002 0.71405 0.73582 0.74911 0.72035 0.75448 0.66773 0.74408 0.74505 0.80418 0.76177 0.71714 0.80711 0.76770 0.81967 0.69595 0.52242 0.74618 0.74721 0.72542 0.77406 0.66753 0.77955 0.71897 0.75257 0.75495 0.80135 0.76419 0.77138 0.79041 0.73196 0.72771 0.668185 0.718867 0.70769 0.68824 0.782863 0.677221 0.69389 0.70071 0.74634 0.71453 0.68683 5 0.73441 0.74418 -0.0128144 5 0.72453 0.69935 0.025172 0.35226 0.3343907 insignificant 1 1 insignificant 0.80623 0.332247 insignificant 1 1 insignificant 0.0017494 0.956184 insignificant 1 insignificant 0.73441 0.705828 0.034095 5 0.72453 0.654383 0.070142 7.1808e-03 0.88100 weaklyHypermeth 2.4761e-01 1 insignificant 7.6757e-02 0.67906 insignificant 1.0000e+00 1 insignificant 0.034406 1.8419e-01 insignificant 1.0000e+00 insignificant 0.73441 0.71967 0.0339983 5 0.72453 0.74579 -0.02126056 5.0001e-03 0.034299 weaklyHypermeth 7.1430e-01 1 insignificant 4.4141e-01 0.022954 inconclusive 1.0000e+00 1 insignificant -0.0037483 9.2023e-01 insignificant 1.000000 insignificant 0.74418 0.705828 0.043183 5 0.69935 0.65438 0.044971 5.2019e-03 0.93101 weaklyHypermeth 1.6939e-01 1 insignificant 1.9680e-02 0.74179 weaklyHypermeth 8.5567e-01 1 insignificant 0.032656 2.4139e-01 insignificant 1.0000e+00 insignificant 0.74418 0.71967 0.0489318 5 0.69935 0.74579 -0.0464324 7.7241e-02 5.7197e-02 insignificant 1.0000e+00 1.000000 insignificant 3.5632e-01 0.207903 insignificant 1.0000e+00 1 insignificant -0.0054977 0.88674551 insignificant 1.00000 insignificant 0.705828 0.71967 0.0016928 5 0.65438 0.74579 -0.091403 0.803743 1.0954e-03 inconclusive 1 6.0856e-02 inconclusive 0.85429 1.1407e-03 inconclusive 1 1.0370e-01 insignificant -0.038154 2.8587e-01 insignificant 1.0000e+00 insignificant chr1 233249860 233250860 13784 ENSG00000208115 0.92836 514 7 0.71357 256 7 0.69869 267 7 0.88590 403 7 0.82645 106 7 0.94395 838 7 0.78841 248 7 0.87802 193 7 0.71115 224 7 0.90209 171 7 0.88636 312 7 0.76053 117 7 0.85786 202 7 0.84856 47 4 0.88546 235 7 0.86488 76 6 0.77778 28 4 0.53876 649 7 0.79427 233 7 0.90485 458 7 0.63976 113 7 0.67513 187 7 0.90741 166 6 0.78393 100 7 0.87071 312 7 0.75509 310 7 0.78286 140 7 0.86238 88 7 0.69034 260 7 0.78741 371 7 0.83321 449 7 0.89708 540 7 0.011132 390 7 0.017081 254 7 0.00000 235 4 0.00000 82 7 0.12134 374 7 0.022255 528 7 0.57502 384 7 0.60358 366 7 0.68646 430 7 0.55587 453 7 0.63662 466 7 0.92331 0.81643 0.68548 0.89272 0.81860 0.91711 0.91215 0.87527 0.82275 0.90930 0.88169 0.86635 0.84507 0.83850 0.88750 0.84810 0.90907 0.54705 0.92112 0.90294 0.83449 0.65780 0.90969 0.81168 0.85024 0.85802 0.84822 0.87207 0.69648 0.90101 0.88409 0.90808 0.011274 0.023598 0.00000 0.00000 0.015609 0.018960 0.60385 0.62193 0.69243 0.56937 0.58902 7 0.83638 0.85107 -0.0168019 7 0.75901 0.72867 0.030338 0.80198 0.7075085 insignificant 1 1 insignificant 0.21295 0.998563 insignificant 1 1 insignificant 0.0293522 0.392657 insignificant 1 insignificant 0.83630 0.013426 0.821833 7 0.72888 0.011414 0.717469 1.1607e-78 1.00000 hypermethylated 1.1607e-75 1 hypermethylated 1.2920e-18 1.00000 hypermethylated 1.2920e-15 1 hypermethylated 0.791160 1.4955e-16 hypermethylated 7.4776e-14 hypermethylated 0.83638 0.60486 0.2313878 7 0.75901 0.57474 0.18426261 2.3334e-14 1.000000 hypermethylated 1.1667e-11 1 hypermethylated 2.3237e-10 1.000000 hypermethylated 2.3237e-07 1 hypermethylated 0.2082811 2.4711e-05 hypermethylated 0.012355 hypermethylated 0.85120 0.013956 0.837879 7 0.66200 0.12126 0.540745 7.8791e-79 1.00000 hypermethylated 7.8791e-76 1 hypermethylated 4.1749e-15 1.00000 hypermethylated 4.1749e-12 1 hypermethylated 0.761808 6.7520e-14 hypermethylated 6.7520e-11 hypermethylated 0.85079 0.60505 0.2539420 7 0.65580 0.61727 0.0385321 1.0740e-18 1.0000e+00 hypermethylated 1.0740e-15 1.000000 hypermethylated 1.1353e-09 0.999983 hypermethylated 1.1353e-06 1 hypermethylated 0.1789289 0.00018433 weaklyHypermeth 0.12371 insignificant 0.013956 0.60486 -0.5899004 7 0.12126 0.57474 -0.453487 1.000000 6.0781e-39 hypomethylated 1 6.0781e-36 hypomethylated 1.00000 6.4059e-10 hypomethylated 1 6.4059e-07 hypomethylated -0.582879 3.7357e-08 hypomethylated 3.7357e-05 hypomethylated chr1 233602711 233603711 13789 TBCE ENSG00000116957 0.86817 275 9 0.67882 236 9 0.74992 149 10 0.85778 214 9 0.76862 84 7 0.77337 265 10 0.69154 222 9 0.84221 178 9 0.75360 111 9 0.70340 148 9 0.71205 336 9 0.77451 142 9 0.74912 168 9 0.57781 53 5 0.85211 191 9 0.80680 100 9 0.59754 1089 9 0.82598 160 9 0.69673 148 9 0.78619 281 10 0.61340 69 7 0.75707 72 7 0.79196 191 9 0.79363 91 8 0.82531 69 9 0.87179 174 9 0.76893 160 7 0.67460 79 7 0.71622 118 7 0.66597 256 9 0.64562 195 9 0.72308 310 11 0.694320 136 9 0.597691 134 9 0.79284 220 9 0.81944 79 9 0.67716 118 9 0.781690 216 10 0.83250 274 9 0.84090 282 9 0.75293 219 9 0.78870 208 9 0.80486 202 9 0.77999 0.75663 0.71892 0.85349 0.74768 0.76186 0.72739 0.79657 0.76274 0.72456 0.75489 0.75884 0.78287 0.76913 0.83125 0.79956 0.74190 0.79119 0.77144 0.72802 0.69287 0.80920 0.75484 0.79921 0.80967 0.82871 0.75910 0.83504 0.73832 0.74971 0.81301 0.73545 0.696830 0.626785 0.73285 0.77363 0.707085 0.784537 0.78679 0.79725 0.72484 0.75050 0.81585 7 0.77165 0.77410 -0.0019029 9 0.74456 0.72548 0.019081 0.37126 0.7348320 insignificant 1 1 insignificant 0.62450 0.824516 insignificant 1 1 insignificant 0.0160132 0.583993 insignificant 1 insignificant 0.77165 0.739756 0.039589 9 0.74456 0.699727 0.044834 8.8710e-03 0.97622 weaklyHypermeth 2.9570e-01 1 insignificant 8.1157e-02 0.96104 insignificant 1.0000e+00 1 insignificant 0.026122 5.2335e-01 insignificant 1.0000e+00 insignificant 0.77165 0.80844 -0.0091492 9 0.74456 0.80435 -0.05978961 6.1001e-01 0.012098 weaklyHypometh 1.0000e+00 1 insignificant 8.7480e-01 0.099216 insignificant 1.0000e+00 1 insignificant -0.0506646 5.1446e-02 insignificant 1.000000 insignificant 0.77410 0.739756 0.041107 9 0.72548 0.69973 0.025753 3.1479e-02 0.75504 weaklyHypermeth 8.5078e-01 1 insignificant 2.1065e-01 0.83734 insignificant 1.0000e+00 1 insignificant 0.010109 8.1222e-01 insignificant 1.0000e+00 insignificant 0.77410 0.80844 -0.0071653 9 0.72548 0.80435 -0.0788706 6.2606e-01 6.6433e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.5397e-01 0.070998 insignificant 1.0000e+00 1 insignificant -0.0666778 0.02878961 weaklyHypometh 1.00000 insignificant 0.739756 0.80844 -0.0503581 9 0.69973 0.80435 -0.104624 0.982887 1.4974e-02 weaklyHypometh 1 5.5108e-01 insignificant 0.99585 1.6181e-01 insignificant 1 1.0000e+00 insignificant -0.076787 8.4493e-02 insignificant 1.0000e+00 insignificant chr1 234339919 234340919 13795 ENSG00000203673 0.93372 495 6 0.80876 354 8 0.88699 128 7 0.95525 413 6 0.89841 86 6 0.88073 718 8 0.89065 125 6 0.85247 190 8 0.95348 126 6 0.96090 93 4 0.92595 385 8 0.99333 33 1 0.93278 114 7 0.98000 68 5 0.96541 137 6 0.60938 42 4 0.92000 13 1 0.91164 534 6 0.96948 227 8 0.96537 336 5 0.94271 83 6 0.97285 63 2 0.94771 230 5 0.80278 56 5 0.95353 179 6 0.95381 319 8 0.97121 84 6 0.93452 69 5 0.82973 256 7 0.96393 367 8 0.96362 345 7 0.85121 375 7 0.857385 233 7 0.782956 171 8 0.89600 389 6 0.83571 37 3 0.75923 244 7 0.851970 355 7 0.95165 369 6 0.84691 396 7 0.95103 400 6 0.95581 309 5 0.95970 372 8 0.91892 0.80266 0.86266 0.91806 0.91214 0.91358 0.85207 0.83584 0.88115 0.92239 0.89714 0.97956 0.94756 0.99670 0.95228 0.66838 0.79106 0.94937 0.96858 0.92650 0.84341 0.94965 0.94510 0.84432 0.92455 0.93851 0.96620 0.91841 0.94900 0.94694 0.93129 0.92323 0.868742 0.864987 0.84448 0.83093 0.859588 0.913462 0.94505 0.94391 0.93293 0.92036 0.96074 2 0.91681 0.94013 -0.0237490 7 0.91464 0.94993 -0.035284 0.99941 0.0031884 weaklyHypometh 1 1 insignificant 0.97539 0.055751 insignificant 1 1 insignificant -0.0142334 0.582352 insignificant 1 insignificant 0.91683 0.844647 0.067262 7 0.92413 0.740361 0.183766 2.8331e-04 0.98668 weaklyHypermeth 1.1332e-02 1 weaklyHypermeth 8.1876e-02 0.97003 insignificant 1.0000e+00 1 insignificant 0.079193 1.3273e-02 weaklyHypermeth 8.2959e-01 insignificant 0.91683 0.94962 -0.0303143 6 0.92413 0.85129 0.07283341 9.9983e-01 0.054519 insignificant 1.0000e+00 1 insignificant 8.7981e-01 0.379925 insignificant 1.0000e+00 1 insignificant -0.0232843 4.3380e-01 insignificant 1.000000 insignificant 0.94013 0.845238 0.092456 7 0.94993 0.83291 0.117021 1.5936e-06 0.99970 weaklyHypermeth 1.1383e-04 1 weaklyHypermeth 1.7427e-02 0.99617 weaklyHypermeth 7.9216e-01 1 insignificant 0.093427 4.7809e-03 weaklyHypermeth 3.1873e-01 insignificant 0.94013 0.95014 -0.0087880 6 0.94993 0.95771 -0.0077783 8.9281e-01 1.7797e-01 insignificant 1.0000e+00 1.000000 insignificant 5.4197e-01 0.634693 insignificant 1.0000e+00 1 insignificant -0.0090509 0.75063149 insignificant 1.00000 insignificant 0.844647 0.94962 -0.0953085 6 0.74036 0.85129 -0.110933 1.000000 4.5548e-03 weaklyHypometh 1 2.0704e-01 insignificant 0.99986 2.2731e-01 insignificant 1 1.0000e+00 insignificant -0.102477 7.8054e-03 weaklyHypometh 5.5753e-01 insignificant chr1 236156448 236157448 13825 ENSG00000187712 0.92263 252 5 0.91123 103 5 0.69259 58 5 0.93099 176 5 0.90816 37 4 0.90875 336 5 0.96000 29 5 0.85084 66 5 0.87333 42 4 0.92381 42 5 0.76927 117 5 1.00000 18 1 0.75090 54 5 0.92857 8 1 0.92333 74 5 0.50625 47 4 1.00000 5 0 0.93809 178 5 0.81457 89 5 0.90410 149 5 0.91810 42 5 0.93182 57 4 0.94503 121 5 0.91286 51 5 0.95139 82 5 0.78951 103 5 0.89423 83 5 0.96923 46 4 0.94037 75 5 0.98084 112 5 0.89522 118 5 0.93705 178 5 0.631270 111 5 0.402731 97 5 0.91250 189 5 0.92262 78 4 0.49778 76 5 0.905959 126 5 0.93662 219 5 0.95007 189 5 0.96630 155 5 0.96054 197 5 0.94278 155 5 0.94441 0.91766 0.88023 0.94036 0.93225 0.91055 0.98382 0.87429 0.84583 0.93978 0.91891 0.98646 0.89855 0.94040 0.92451 0.52617 0.98646 0.93721 0.97171 0.90360 0.90154 0.92480 0.92171 0.90567 0.93964 0.95744 0.89063 0.96210 0.94785 0.98437 0.94577 0.94203 0.668406 0.414321 0.86811 0.89946 0.642613 0.889880 0.93995 0.95660 0.98366 0.95138 0.95529 4 0.90000 0.93258 -0.0325433 5 0.65703 0.79776 -0.140733 0.99988 0.3149428 insignificant 1 1 insignificant 0.99350 0.236072 insignificant 1 1 insignificant -0.0512660 0.096277 lowCoverage 1 lowCoverage 0.90037 0.747415 0.152749 5 0.70189 0.681604 0.020288 2.2895e-04 1.00000 weaklyHypermeth 9.5396e-03 1 weaklyHypermeth 2.1683e-03 0.99985 weaklyHypermeth 1.6679e-01 1 insignificant 0.158727 1.5989e-01 lowCoverage 1.0000e+00 lowCoverage 0.90219 0.94208 -0.0362365 5 0.90265 0.94751 -0.04485679 9.9178e-01 0.094268 insignificant 1.0000e+00 1 insignificant 9.4316e-01 0.222031 insignificant 1.0000e+00 1 insignificant -0.0803920 6.7771e-03 lowCoverage 0.810754 lowCoverage 0.93246 0.747415 0.183085 5 0.73998 0.68160 0.058373 6.9714e-05 1.00000 weaklyHypermeth 3.4857e-03 1 weaklyHypermeth 5.1004e-04 0.99997 weaklyHypermeth 4.6367e-02 1 weaklyHypermeth 0.209993 7.7940e-02 lowCoverage 1.0000e+00 lowCoverage 0.93415 0.94208 -0.0073548 5 0.93597 0.94751 -0.0115372 7.3807e-01 2.6891e-01 insignificant 1.0000e+00 1.000000 insignificant 4.7315e-01 0.393590 insignificant 1.0000e+00 1 insignificant -0.0291260 0.07801094 lowCoverage 1.00000 lowCoverage 0.748148 0.94208 -0.1916780 5 0.75425 0.94751 -0.193260 0.999979 1.0128e-03 weaklyHypometh 1 5.9578e-02 weaklyHypometh 0.99998 1.9583e-03 weaklyHypometh 1 1.5064e-01 insignificant -0.239119 5.3165e-02 lowCoverage 1.0000e+00 lowCoverage chr1 238944072 238945072 13915 ENSG00000199241 0.76919 149 7 0.79675 203 7 0.71315 81 7 0.82522 103 7 0.62676 54 6 0.80722 322 7 0.63335 65 7 0.77491 137 7 0.68958 46 3 0.90000 39 4 0.82071 243 7 0.66926 39 6 0.75495 79 7 0.77341 59 7 0.70918 57 6 0.71020 35 6 0.37500 7 0 0.83922 135 7 0.88068 133 7 0.81787 228 7 0.90130 40 5 0.76845 97 6 0.84575 110 7 0.76885 83 7 0.89069 53 4 0.85129 214 7 0.70577 79 6 0.69583 51 4 0.72671 136 7 0.81300 259 7 0.80987 239 7 0.79931 260 7 0.742652 138 7 0.793290 71 6 0.76811 179 6 0.75000 7 0 0.77115 135 6 0.728734 230 7 0.80071 110 7 0.76860 103 7 0.81600 103 7 0.76933 62 6 0.78056 137 7 0.75849 0.77614 0.70930 0.85098 0.63420 0.81340 0.63771 0.74662 0.80888 0.91018 0.83243 0.68583 0.75302 0.77645 0.67936 0.64528 0.57459 0.81679 0.87879 0.80444 0.89102 0.81924 0.85492 0.72764 0.90088 0.82645 0.66321 0.80240 0.74026 0.81834 0.80922 0.82083 0.779045 0.814825 0.78732 0.68227 0.810514 0.752988 0.77938 0.76378 0.77468 0.77041 0.76395 1 0.80352 0.83097 -0.0215870 7 0.77095 0.79877 -0.027825 0.93040 0.1557449 insignificant 1 1 insignificant 0.99385 0.097097 insignificant 1 1 insignificant -0.0537368 0.107564 insignificant 1 insignificant 0.80371 0.826316 0.012827 7 0.78585 0.753137 0.032708 1.0292e-02 0.33209 weaklyHypermeth 3.3200e-01 1 insignificant 6.3275e-01 0.44211 insignificant 1.0000e+00 1 insignificant -0.014659 5.9904e-01 insignificant 1.0000e+00 insignificant 0.80371 0.78447 0.0036535 7 0.78585 0.78638 -0.00053487 4.1962e-01 0.371414 insignificant 1.0000e+00 1 insignificant 6.2845e-01 0.388221 insignificant 1.0000e+00 1 insignificant -0.0427067 1.3358e-01 insignificant 1.000000 insignificant 0.83117 0.826316 0.024083 7 0.80574 0.75314 0.052604 5.2511e-03 0.55235 weaklyHypermeth 1.6939e-01 1 insignificant 3.0874e-01 0.72492 insignificant 1.0000e+00 1 insignificant 0.039078 9.2173e-02 insignificant 1.0000e+00 insignificant 0.83117 0.78447 0.0223533 7 0.80574 0.78638 0.0193604 3.9324e-02 2.6602e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.9241e-01 0.459972 insignificant 1.0000e+00 1 insignificant 0.0110300 0.61806355 insignificant 1.00000 insignificant 0.826316 0.78447 -0.0108492 7 0.75314 0.78638 -0.033243 0.101526 2.5646e-02 weaklyHypometh 1 8.8433e-01 insignificant 0.57657 4.5694e-01 insignificant 1 1.0000e+00 insignificant -0.028048 6.3346e-02 insignificant 1.0000e+00 insignificant chr1 240145567 240146567 13936 ENSG00000218255 0.58325 186 6 0.46703 212 6 0.58136 143 7 0.55121 143 6 0.67525 102 5 0.55045 300 7 0.67165 112 5 0.57376 176 7 0.53816 118 7 0.76075 147 6 0.58951 234 7 0.61399 74 5 0.67797 140 4 0.84286 47 4 0.64618 143 6 0.64209 54 5 0.47814 376 8 0.70926 117 6 0.59258 188 6 0.66055 239 7 0.67713 66 6 0.74432 69 5 0.52802 106 6 0.73072 72 6 0.67968 173 5 0.51753 258 7 0.83619 97 4 0.76190 39 2 0.59273 150 6 0.68460 274 7 0.63429 257 7 0.59744 266 7 0.638496 214 6 0.744423 155 6 0.58356 179 6 0.77409 119 6 0.59510 124 6 0.549087 235 7 0.62225 177 5 0.61632 194 6 0.58409 136 6 0.85008 147 5 0.63488 147 7 0.79342 0.76442 0.69441 0.80655 0.72170 0.83595 0.78009 0.82280 0.73312 0.81139 0.79909 0.78216 0.81835 0.84136 0.82573 0.78657 0.76227 0.92243 0.84009 0.83476 0.79299 0.77795 0.79709 0.82536 0.90161 0.82512 0.81356 0.74907 0.88765 0.85696 0.84240 0.82897 0.747800 0.747478 0.80089 0.74834 0.772154 0.841288 0.84122 0.86130 0.86172 0.84003 0.81215 5 0.77299 0.79639 -0.0301551 6 0.52026 0.56106 -0.040794 0.99853 0.0276135 weaklyHypometh 1 1 insignificant 0.99989 0.041832 weaklyHypometh 1 1 insignificant -0.0450818 0.202314 insignificant 1 insignificant 0.77299 0.756335 0.032033 6 0.52026 0.497353 0.022912 1.5430e-01 0.96404 insignificant 1.0000e+00 1 insignificant 2.9693e-01 0.92038 insignificant 1.0000e+00 1 insignificant -0.027160 5.4076e-01 insignificant 1.0000e+00 insignificant 0.77490 0.82022 -0.0329702 6 0.57807 0.61892 -0.04084883 9.3695e-01 0.033172 weaklyHypometh 1.0000e+00 1 insignificant 9.7898e-01 0.037265 weaklyHypometh 1.0000e+00 1 insignificant -0.0412243 4.6047e-01 insignificant 1.000000 insignificant 0.79639 0.756335 0.063392 6 0.56106 0.49735 0.063706 1.0649e-02 0.99839 weaklyHypermeth 3.2270e-01 1 insignificant 8.7287e-02 0.99841 insignificant 1.0000e+00 1 insignificant 0.017922 7.0797e-01 insignificant 1.0000e+00 insignificant 0.79770 0.82022 -0.0019217 6 0.62340 0.61892 0.0044778 4.9404e-01 3.9501e-01 insignificant 1.0000e+00 1.000000 insignificant 7.7132e-01 0.627268 insignificant 1.0000e+00 1 insignificant 0.0038574 0.94639521 insignificant 1.00000 insignificant 0.757073 0.82022 -0.0662766 6 0.55261 0.61892 -0.066306 0.999803 7.6548e-02 insignificant 1 1.0000e+00 insignificant 0.99994 1.8592e-01 insignificant 1 1.0000e+00 insignificant -0.014064 8.2279e-01 insignificant 1.0000e+00 insignificant chr1 242326532 242327532 14073 ZNF238 ENSG00000179456 0.91381 159 5 0.90905 90 5 0.66842 32 1 0.96959 135 5 1.00000 9 1 0.94554 132 5 0.92308 41 5 0.99310 47 3 0.92000 33 1 0.92917 40 5 0.97033 81 5 0.87879 24 1 0.92000 64 5 NA 0 0 0.97091 59 5 0.87500 12 1 0.933333 7 0 0.900326 141 5 1.00000 51 5 0.94488 173 5 0.887778 34 2 0.833205 107 5 0.92475 63 5 0.97143 36 5 0.94314 42 5 0.95159 104 5 0.910160 62 5 0.96667 19 1 0.91264 44 1 0.96444 108 5 0.95739 71 5 0.95502 218 5 0.72619 71 5 0.799038 66 5 1.0000000 49 4 0.798182 49 5 0.65667 25 1 0.90537 60 4 0.823418 200 5 0.91555 156 5 0.9129545 126 5 0.943333 132 5 0.617253 140 5 0.91361 0.91530 0.71313 0.96285 NA 0.93880 0.84387 0.98600 0.90198 0.899134 0.97797 0.83978 0.889109 NA 0.966697 0.74629 0.864686 0.900242 1.000000 0.949877 0.88806 0.8167364 0.91552 0.97878 0.92749 0.936074 0.863080 0.932343 0.90850 0.969078 0.960312 0.94515 0.71087 0.7703256 0.8877460 0.756526 0.66782 0.910891 0.765236 0.88417 0.908060 0.92789 0.604946 1 0.92331 0.92841 -0.0038828 5 0.93212 0.93251 -0.0003856 4.8618e-01 0.59313068 insignificant 1.00000000 1.00000 insignificant 0.54414220 0.76955961 insignificant 1.00000 1.00000 insignificant -0.00702646 0.732159 lowCoverage 1 lowCoverage 0.92331 0.81250 0.1123972 5 0.93212 0.832335 0.0997860 3.8758e-04 0.9473771 weaklyHypermeth 6.2513e-03 1 weaklyHypermeth 1.6306e-02 0.9684957 weaklyHypermeth 2.6300e-01 1 insignificant 0.110250 8.1571e-02 lowCoverage 1.0000000 lowCoverage 0.92331 0.810345 0.1079577 5 0.93212 0.844546 0.0875751 3.9722e-04 9.9996e-01 weaklyHypermeth 1.5889e-02 1.000000 weaklyHypermeth 1.4585e-03 0.99993069 weaklyHypermeth 7.2924e-02 1.00000 weaklyHypermeth 0.0819884 2.4808e-01 lowCoverage 1.0000e+00 lowCoverage 0.92841 0.81250 0.1156385 5 0.93251 0.832335 0.1001716 8.9062e-04 0.84341616 weaklyHypermeth 1.4365e-02 1.00000 weaklyHypermeth 1.3167e-02 0.946381 weaklyHypermeth 2.2316e-01 1 insignificant 0.11727654 6.7118e-02 lowCoverage 1.0000000 lowCoverage 0.92841 0.810345 0.1069384 5 0.93251 0.844546 0.0879607 9.9947e-04 0.99926223 weaklyHypermeth 3.4464e-02 1.00000 weaklyHypermeth 5.5529e-03 0.999660 weaklyHypermeth 2.2212e-01 1 insignificant 0.0890149 0.21301146 lowCoverage 1.00000 lowCoverage 0.81250 0.810345 -0.0081045 5 0.832335 0.844546 -0.012211 2.5208e-01 6.1745e-01 insignificant 1.00000000 1.0000e+00 insignificant 2.2124e-01 6.4456e-01 insignificant 1.000000 1.0000e+00 insignificant -0.028262 0.72664031 lowCoverage 1.000000 lowCoverage chr1 242443921 242444921 14106 ENSG00000208068 0.62084 131 4 0.69656 241 6 0.72027 76 6 0.88449 235 4 0.80661 75 5 0.87357 248 6 0.77016 105 6 0.71198 74 5 0.82783 66 5 0.95000 36 3 0.85518 150 6 0.69048 63 3 0.59656 69 3 1.00000 1 0 0.55629 76 5 0.74459 48 3 0.429487 27 2 0.485749 104 5 0.68239 155 5 0.77640 145 5 0.706122 32 4 0.500000 10 0 0.76343 101 6 0.60000 27 3 0.45556 75 3 0.71444 124 6 0.524140 45 5 0.65846 27 3 0.65317 93 5 0.60542 49 3 0.53567 150 6 0.78240 86 4 0.43486 165 6 0.756702 47 3 0.7455866 234 6 0.218681 182 4 0.59447 38 3 0.16941 133 6 0.701128 152 5 0.60796 217 4 0.6566715 260 4 0.498729 79 3 0.530476 157 4 0.75884 0.60320 0.60491 0.82167 0.768132 0.74624 0.77579 0.51695 0.70380 0.921875 0.87234 0.81250 0.340774 0.66113 0.458333 0.62788 0.355997 0.386517 0.595548 0.738414 0.65625 0.5000000 0.69167 0.56428 0.33889 0.655990 0.501736 0.673077 0.65924 0.395013 0.469122 0.83523 0.55732 0.6972769 0.7394903 0.013985 0.46562 0.016827 0.683830 0.43312 0.424780 0.52036 0.353906 0 0.72128 0.69975 0.0534642 6 0.73660 0.67369 0.0629126 1.5614e-02 0.99797252 weaklyHypermeth 1.00000000 1.00000 insignificant 0.01704118 0.99923484 weaklyHypermeth 1.00000 1.00000 insignificant 0.10907099 0.022095 lowCoverage 1 lowCoverage 0.72128 0.43287 0.2936825 6 0.73660 0.459935 0.2766642 3.3479e-09 1.0000000 hypermethylated 9.0485e-08 1 hypermethylated 4.4137e-04 0.9998830 hypermethylated 1.0509e-02 1 hypermethylated 0.247352 6.4318e-02 lowCoverage 0.9458515 lowCoverage 0.72128 0.708671 0.1049055 4 0.73660 0.628637 0.1079620 1.9690e-03 9.5382e-01 lowCoverage 6.1533e-02 1.000000 lowCoverage 1.0038e-02 0.99876843 lowCoverage 3.3459e-01 1.00000 lowCoverage 0.1349788 2.0995e-02 lowCoverage 7.7760e-01 lowCoverage 0.69841 0.43179 0.2280149 6 0.62506 0.394230 0.2308346 4.5922e-04 0.99996407 hypermethylated 7.7833e-03 1.00000 hypermethylated 1.0273e-01 0.993881 insignificant 1.0000e+00 1 insignificant 0.13828139 2.5157e-01 lowCoverage 1.0000000 lowCoverage 0.69975 0.708671 0.0523212 4 0.67369 0.628637 0.0450494 1.5042e-01 0.72992287 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.3796e-01 0.947895 lowCoverage 1.0000e+00 1 lowCoverage 0.0259078 0.60669689 lowCoverage 1.00000 lowCoverage 0.43287 0.708671 -0.2341202 4 0.459935 0.628637 -0.168702 9.9188e-01 2.0017e-02 lowCoverage 1.00000000 4.0035e-01 lowCoverage 9.5877e-01 1.6801e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.112374 0.34884415 lowCoverage 1.000000 lowCoverage chr1 243517639 243518639 14125 ENSG00000218287 0.85907 195 7 0.71797 297 7 0.72078 92 7 0.80115 224 7 0.73715 78 5 0.65884 371 8 0.81667 100 3 0.66118 149 7 0.79750 76 3 0.69074 47 2 0.61100 292 7 0.82341 53 7 0.82143 77 5 0.82214 63 5 0.84332 85 5 0.52083 33 3 0.833333 11 0 0.790191 162 7 0.87262 92 5 0.72132 276 7 0.802564 41 5 0.761905 28 4 0.69003 158 7 0.55714 59 7 0.81875 75 5 0.80077 249 7 0.797468 125 7 0.58519 34 2 0.75765 136 7 0.62200 269 7 0.66145 326 7 0.71922 303 7 0.60293 148 7 0.582433 139 7 0.8472222 189 5 0.666667 9 0 0.80516 133 7 0.74557 299 7 0.801691 264 7 0.92671 228 7 0.7401560 265 7 0.840898 119 7 0.659649 221 7 0.87028 0.77996 0.85080 0.80799 0.766592 0.84874 0.79427 0.84028 0.75939 0.819084 0.81163 0.80354 0.852672 0.80424 0.826705 0.60814 0.879687 0.875451 0.873388 0.853898 0.92566 0.8995589 0.71265 0.75232 0.67904 0.779806 0.770252 0.752672 0.76581 0.790634 0.822412 0.73878 0.70460 0.7723106 0.8152036 0.772820 0.79674 0.817125 0.799491 0.92281 0.830545 0.84435 0.849087 1 0.85792 0.84953 0.0143935 7 0.72687 0.69252 0.0343578 3.9880e-02 0.92337626 weaklyHypermeth 1.00000000 1.00000 insignificant 0.37200285 0.92289437 insignificant 1.00000 1.00000 insignificant 0.04152205 0.225766 insignificant 1 insignificant 0.85792 0.83751 0.0299542 7 0.72687 0.686580 0.0402935 1.6242e-02 0.9964046 weaklyHypermeth 2.0560e-01 1 insignificant 3.5058e-02 0.9991288 weaklyHypermeth 5.1557e-01 1 insignificant 0.047703 3.5997e-01 insignificant 1.0000000 insignificant 0.85792 0.906934 -0.0181438 7 0.72687 0.731604 -0.0047307 8.2393e-01 5.5562e-01 insignificant 1.0000e+00 1.000000 insignificant 6.2464e-01 0.64275087 insignificant 1.0000e+00 1.00000 insignificant -0.0377879 4.7677e-01 insignificant 1.0000e+00 insignificant 0.84953 0.83751 0.0165489 7 0.69252 0.686580 0.0059357 4.3168e-01 0.81168468 insignificant 1.0000e+00 1.00000 insignificant 2.2407e-01 0.954889 insignificant 1.0000e+00 1 insignificant 0.00618141 9.0707e-01 insignificant 1.0000000 insignificant 0.84969 0.907019 -0.0300894 7 0.72047 0.756004 -0.0355350 9.6143e-01 0.26585767 insignificant 1.0000e+00 1.00000 insignificant 7.7884e-01 0.576228 insignificant 1.0000e+00 1 insignificant -0.0793100 0.17348533 insignificant 1.00000 insignificant 0.83751 0.906934 -0.0473955 7 0.686580 0.731604 -0.045024 9.9939e-01 8.4307e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.9993e-01 1.9981e-01 insignificant 1.000000 1.0000e+00 insignificant -0.085491 0.20997876 insignificant 1.000000 insignificant chr1 243839336 243840336 14151 KIF26B ENSG00000162849 0.89883 214 6 0.95135 216 6 0.75278 124 6 0.88254 122 6 0.92708 34 3 0.86298 212 6 0.86347 64 6 0.91535 66 3 0.75591 88 6 0.87813 61 6 0.92951 190 6 0.85128 40 4 0.83437 78 4 0.84365 38 3 0.87804 72 5 0.84091 35 5 0.972222 16 1 0.738753 130 6 0.91944 65 5 0.92825 141 6 0.702590 51 6 0.742063 60 5 0.93049 117 6 0.62644 76 5 0.94818 38 2 0.92577 199 6 0.850315 64 6 0.90278 38 4 0.80794 99 5 0.83998 197 6 0.94864 178 6 0.90921 248 6 0.92871 119 3 0.754167 48 3 0.6666667 66 2 0.741667 21 3 0.90140 123 6 0.81255 119 3 0.833835 239 6 0.84789 202 6 0.7734666 200 6 0.843056 89 2 0.869884 192 6 0.87747 0.91315 0.71751 0.86971 0.806686 0.81373 0.88983 0.89574 0.80656 0.856578 0.91735 0.64758 0.961822 0.88007 0.856820 0.74231 0.952568 0.816600 0.932171 0.938989 0.69767 0.6674655 0.90597 0.86673 0.91020 0.927726 0.844440 0.941860 0.85714 0.875935 0.945562 0.92029 0.92469 0.8443798 0.8713022 0.640715 0.93618 0.839328 0.861642 0.85586 0.807572 0.69729 0.876271 2 0.86028 0.88856 -0.0293793 6 0.81628 0.76109 0.0551920 8.7124e-01 0.37752519 insignificant 1.00000000 1.00000 insignificant 0.48216091 0.67236439 insignificant 1.00000 1.00000 insignificant 0.02671038 0.440541 lowCoverage 1 lowCoverage 0.86028 0.88485 -0.0289900 3 0.81628 0.809601 0.0066779 2.9466e-01 0.4171255 lowCoverage 1.0000e+00 1 lowCoverage 5.2006e-01 0.6970342 lowCoverage 1.0000e+00 1 lowCoverage 0.070382 1.5387e-01 lowCoverage 1.0000000 lowCoverage 0.86064 0.832972 0.0298201 6 0.86899 0.827185 0.0418067 5.0025e-02 9.7619e-01 insignificant 1.0000e+00 1.000000 insignificant 8.0066e-02 0.97432393 insignificant 1.0000e+00 1.00000 insignificant 0.0376167 1.1014e-01 lowCoverage 1.0000e+00 lowCoverage 0.88791 0.88508 0.0019593 3 0.66595 0.833401 -0.1674498 5.2921e-01 0.76038986 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.0073e-01 0.691705 lowCoverage 1.0000e+00 1 lowCoverage 0.04367204 4.1120e-01 lowCoverage 1.0000000 lowCoverage 0.88987 0.832972 0.0595253 6 0.88793 0.827185 0.0607493 1.3436e-02 0.99704308 weaklyHypermeth 3.7324e-01 1.00000 insignificant 2.9759e-02 0.964604 weaklyHypermeth 7.7207e-01 1 insignificant 0.0109064 0.75640959 insignificant 1.00000 insignificant 0.88641 0.832972 0.0522370 3 0.861201 0.827185 0.034016 1.1627e-01 9.2626e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 1.5830e-01 8.8913e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.032766 0.48273626 lowCoverage 1.000000 lowCoverage chr2 2393365 2394365 14240 MYT1L ENSG00000186487 0.88408 429 6 0.89021 187 6 0.71674 126 6 0.92590 284 6 0.95833 57 5 0.87710 477 6 0.86560 124 6 0.84665 172 6 0.81890 126 5 0.87568 130 6 0.91022 190 6 0.86345 62 4 0.94205 220 6 0.91396 96 4 0.86873 170 6 0.60833 34 2 0.640797 52 4 0.810912 334 6 0.92916 96 6 0.94987 288 6 0.900041 75 5 0.804791 144 6 0.75072 156 6 0.86825 85 5 0.91372 75 5 0.90586 216 6 0.833519 78 6 0.62500 55 5 0.91565 160 6 0.92599 253 6 0.95959 179 6 0.92539 381 6 0.17007 277 6 0.089636 81 4 0.1666667 292 6 0.433333 14 1 0.24648 171 6 0.45410 238 6 0.865763 394 6 0.85074 271 6 0.8774104 303 6 0.878557 325 6 0.867615 332 6 0.87300 0.90082 0.69992 0.92307 0.984375 0.87654 0.84819 0.84070 0.81535 0.863913 0.91474 0.85018 0.935650 0.88780 0.865943 0.85403 0.836732 0.786236 0.923787 0.919250 0.89943 0.7871786 0.88947 0.87732 0.88898 0.887831 0.849213 0.901563 0.87716 0.920845 0.919222 0.90573 0.12448 0.1511949 0.0820312 0.294195 0.27213 0.475938 0.883718 0.84818 0.860434 0.84987 0.833438 2 0.87685 0.89445 -0.0181020 6 0.66200 0.82158 -0.1595734 9.9585e-01 0.08839842 insignificant 1.00000000 1.00000 insignificant 0.99635607 0.28907733 insignificant 1.00000 1.00000 insignificant -0.00587683 0.867657 insignificant 1 insignificant 0.87733 0.28239 0.5979208 6 0.88267 0.288262 0.5944078 3.8617e-56 1.0000000 hypermethylated 3.8617e-53 1 hypermethylated 1.7094e-14 1.0000000 hypermethylated 8.5470e-12 1 hypermethylated 0.594785 7.5310e-05 lowCoverage 0.0053793 lowCoverage 0.87733 0.867077 0.0130400 6 0.88267 0.869876 0.0127940 2.4050e-01 6.2573e-01 insignificant 1.0000e+00 1.000000 insignificant 1.8973e-01 0.66203796 insignificant 1.0000e+00 1.00000 insignificant -0.0131832 5.5810e-01 insignificant 1.0000e+00 insignificant 0.89653 0.28239 0.6239762 6 0.90099 0.288262 0.6127279 3.6696e-39 0.99999992 hypermethylated 3.6696e-36 1.00000 hypermethylated 8.8796e-13 1.000000 hypermethylated 2.2199e-10 1 hypermethylated 0.60066214 4.3435e-05 lowCoverage 0.0039486 lowCoverage 0.89653 0.867077 0.0300784 6 0.90099 0.869876 0.0311141 1.8055e-02 0.91745820 weaklyHypermeth 4.6294e-01 1.00000 insignificant 5.8831e-02 0.870951 insignificant 1.0000e+00 1 insignificant -0.0073063 0.79776133 insignificant 1.00000 insignificant 0.28239 0.867077 -0.5873178 6 0.288262 0.869876 -0.581614 1.0000e+00 3.2609e-20 hypomethylated 1.00000000 3.2609e-17 hypomethylated 1.0000e+00 3.0912e-08 hypomethylated 1.000000 1.0304e-05 hypomethylated -0.607968 0.00017138 lowCoverage 0.028563 lowCoverage chr2 2454701 2455701 14241 MYT1L ENSG00000186487 0.93764 257 5 0.87064 70 5 0.80364 48 5 0.93820 270 5 1.00000 11 0 0.90551 210 5 0.94456 87 5 0.83385 55 5 1.00000 17 0 0.97500 34 5 0.94813 107 5 0.65000 20 0 0.90760 87 5 NA 0 0 0.90351 93 5 1.00000 20 2 0.960000 28 5 0.822872 270 5 0.96333 56 5 0.88647 200 5 1.000000 33 5 0.848371 92 5 0.88364 82 5 0.77814 45 4 0.93143 68 5 0.92846 89 5 0.892576 79 5 1.00000 21 3 0.85385 78 5 0.93225 94 5 0.90536 65 5 0.94862 162 5 0.52222 48 5 0.410183 71 5 1.0000000 115 2 0.529167 62 5 0.57637 51 5 0.53118 114 5 0.826277 229 5 0.76323 198 5 0.8984886 275 5 0.892929 223 5 0.932524 275 5 0.94072 0.87857 0.79228 0.93713 1.000000 0.90566 0.94284 0.82804 1.00000 0.979839 0.95172 0.63710 0.897546 NA 0.903509 1.00000 0.954839 0.817352 0.965950 0.881253 1.00000 0.8359743 0.88143 0.77178 0.92330 0.925517 0.889019 1.000000 0.85199 0.929387 0.905208 0.95070 0.51541 0.3619245 0.5817268 0.524194 0.55487 0.490703 0.815786 0.74584 0.889452 0.89060 0.928212 0 0.90361 0.90198 -0.0011840 5 0.90193 0.90414 -0.0022068 7.1633e-01 0.31832111 insignificant 1.00000000 1.00000 insignificant 0.71995919 0.59107417 insignificant 1.00000 1.00000 insignificant -0.00061197 0.982004 lowCoverage 1 lowCoverage 0.90361 0.65293 0.2528627 5 0.90193 0.558719 0.3432096 1.4353e-22 0.9995665 hypermethylated 1.0252e-20 1 hypermethylated 3.1545e-09 1.0000000 hypermethylated 3.9431e-07 1 hypermethylated 0.313090 1.2605e-02 lowCoverage 0.3151330 lowCoverage 0.90361 0.885000 0.0276354 5 0.90193 0.865841 0.0360877 3.5893e-02 5.4969e-01 weaklyHypermeth 8.9732e-01 1.000000 insignificant 1.1027e-02 0.98149911 weaklyHypermeth 3.5569e-01 1.00000 insignificant 0.0452545 2.4606e-01 lowCoverage 1.0000e+00 lowCoverage 0.90198 0.65293 0.3181788 5 0.90414 0.558719 0.3454163 1.0631e-15 0.99999043 hypermethylated 6.6441e-14 1.00000 hypermethylated 9.4653e-09 1.000000 hypermethylated 1.8931e-06 1 hypermethylated 0.31370210 1.2635e-02 lowCoverage 0.3426764 lowCoverage 0.90198 0.885000 0.0418323 5 0.90414 0.865841 0.0382944 5.1028e-02 0.89303118 insignificant 1.0000e+00 1.00000 insignificant 3.8962e-02 0.991287 weaklyHypermeth 9.7405e-01 1 insignificant 0.0458665 0.23498642 lowCoverage 1.00000 lowCoverage 0.65293 0.885000 -0.2370648 5 0.558719 0.865841 -0.307122 9.9994e-01 7.4410e-07 hypomethylated 1.00000000 6.7645e-05 hypomethylated 1.0000e+00 9.5243e-06 hypomethylated 1.000000 1.9049e-03 hypomethylated -0.267836 0.02296660 lowCoverage 0.740858 lowCoverage chr2 2790418 2791418 14249 MYT1L ENSG00000186487 0.94693 186 7 0.96652 146 3 0.62919 94 5 0.92807 120 5 0.95635 61 7 0.81988 300 7 0.86779 87 5 0.88394 84 5 0.92276 79 5 0.93065 59 5 0.95820 161 5 0.75000 4 0 0.97071 50 5 0.77273 22 2 0.88727 42 5 1.00000 23 2 0.944444 12 1 0.693622 102 7 0.85701 146 7 0.94321 314 7 0.952381 51 5 0.851852 21 3 0.75760 143 5 0.97222 40 2 1.00000 23 3 0.96943 147 5 0.930331 108 5 0.90667 51 5 0.97520 89 5 0.97944 162 7 0.97490 221 8 0.91661 349 8 0.10518 150 5 0.045455 88 2 0.0070258 263 7 0.324675 43 4 0.17061 118 5 0.56101 226 9 0.948964 227 5 0.91532 178 7 0.9911913 141 7 0.925501 172 7 0.928748 156 7 0.95485 0.96485 0.69476 0.87334 0.930556 0.90289 0.82503 0.85626 0.90711 0.933768 0.92726 0.84968 0.965530 0.85650 0.887500 1.00000 0.904735 0.818482 0.864937 0.920222 0.94167 0.8902081 0.94006 0.92818 1.00000 0.939752 0.878098 0.855000 0.97307 0.967289 0.947541 0.90975 0.11044 0.1054859 0.0073770 0.091909 0.16762 0.619722 0.956776 0.94370 0.978925 0.92220 0.928708 1 0.90435 0.93661 -0.0317789 5 0.81485 0.94400 -0.1291484 9.9595e-01 0.09050734 insignificant 1.00000000 1.00000 insignificant 0.99969236 0.01269483 weaklyHypometh 1.00000 1.00000 insignificant -0.05075496 0.100641 lowCoverage 1 lowCoverage 0.90435 0.26014 0.6588176 5 0.81485 0.298590 0.5162613 3.8394e-47 1.0000000 hypermethylated 1.9197e-44 1 hypermethylated 4.6617e-14 0.9999792 hypermethylated 1.5539e-11 1 hypermethylated 0.679138 3.1246e-04 lowCoverage 0.0183797 lowCoverage 0.90435 0.934783 -0.0379424 5 0.81485 0.939518 -0.1246668 9.9438e-01 7.0694e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9987e-01 0.05310809 insignificant 1.0000e+00 1.00000 insignificant -0.0604806 3.0825e-02 lowCoverage 9.6329e-01 lowCoverage 0.93661 0.26014 0.6881525 6 0.94400 0.298590 0.6454097 1.5075e-34 1.00000000 hypermethylated 7.5373e-32 1.00000 hypermethylated 3.3229e-14 1.000000 hypermethylated 1.1076e-11 1 hypermethylated 0.72989291 2.3832e-04 hypermethylated 0.0132401 hypermethylated 0.93661 0.934783 -0.0038940 6 0.94400 0.939518 0.0044816 6.0932e-01 0.66757350 insignificant 1.0000e+00 1.00000 insignificant 7.6898e-01 0.815985 insignificant 1.0000e+00 1 insignificant -0.0097256 0.69042487 insignificant 1.00000 insignificant 0.26014 0.934783 -0.6742044 7 0.298590 0.939518 -0.640928 1.0000e+00 6.9040e-18 hypomethylated 1.00000000 2.3013e-15 hypomethylated 1.0000e+00 2.9321e-09 hypomethylated 1.000000 1.4661e-06 hypomethylated -0.739619 0.00027536 hypomethylated 0.034420 hypomethylated chr2 6829191 6830191 14390 ENSG00000205837 0.73059 270 6 0.54137 241 7 0.54779 213 7 0.81646 213 6 0.67048 122 7 0.68201 422 7 0.66973 196 7 0.77225 184 7 0.69573 223 7 0.82005 197 6 0.76262 202 7 0.72871 97 5 0.53557 227 7 0.69949 127 5 0.63938 233 7 0.63202 67 5 0.589286 213 5 0.526386 286 6 0.70162 220 6 0.69110 294 7 0.706793 75 6 0.393298 143 7 0.80059 144 7 0.63195 150 7 0.73943 84 6 0.79797 268 7 0.733408 141 6 0.71352 139 7 0.60134 265 7 0.71222 349 7 0.73641 241 7 0.60908 290 7 0.31030 211 7 0.268924 134 6 0.0000000 39 2 0.465278 36 3 0.41687 267 7 0.75957 273 7 0.401103 341 7 0.62471 263 7 0.5024495 278 6 0.382068 287 6 0.370712 242 6 0.66444 0.47777 0.51374 0.74773 0.605353 0.67648 0.57649 0.75721 0.63778 0.759821 0.73069 0.72773 0.426333 0.57154 0.589438 0.54945 0.569667 0.434074 0.650389 0.621887 0.67947 0.3389491 0.75076 0.64277 0.71556 0.651702 0.672794 0.630526 0.65338 0.620726 0.654826 0.60328 0.26725 0.1888911 0.2419645 0.329604 0.42257 0.797795 0.316648 0.54674 0.378283 0.38809 0.377097 5 0.66494 0.67060 -0.0052497 7 0.64236 0.76536 -0.1229987 9.3727e-01 0.52910695 insignificant 1.00000000 1.00000 insignificant 0.99544517 0.08874212 insignificant 1.00000 1.00000 insignificant -0.00870199 0.820729 insignificant 1 insignificant 0.66494 0.44630 0.2105158 7 0.64236 0.358231 0.2841271 2.5853e-09 1.0000000 hypermethylated 7.1815e-08 1 hypermethylated 8.5786e-05 1.0000000 hypermethylated 2.7673e-03 1 hypermethylated 0.302476 3.0845e-02 weaklyHypermeth 0.5712093 insignificant 0.66494 0.424522 0.2272977 6 0.64236 0.378092 0.2642658 5.0463e-11 1.0000e+00 hypermethylated 4.5875e-09 1.000000 hypermethylated 8.1066e-08 0.99998959 hypermethylated 1.1882e-05 1.00000 hypermethylated 0.2164237 7.3517e-03 weaklyHypermeth 3.9186e-01 insignificant 0.66972 0.44583 0.2176812 7 0.68882 0.322408 0.3664132 3.7827e-06 1.00000000 hypermethylated 8.5971e-05 1.00000 hypermethylated 5.0986e-04 1.000000 hypermethylated 1.4996e-02 1 hypermethylated 0.31117771 2.7176e-02 weaklyHypermeth 0.5226133 insignificant 0.67060 0.424522 0.2311600 6 0.76536 0.378092 0.3872645 4.9325e-10 0.99999993 hypermethylated 7.0465e-08 1.00000 hypermethylated 8.1083e-08 0.999999 hypermethylated 7.4264e-05 1 hypermethylated 0.2251257 0.00485496 weaklyHypermeth 0.44136 insignificant 0.44630 0.424522 0.0158938 6 0.358231 0.378092 -0.019861 9.2099e-01 6.5774e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9873e-01 5.1667e-01 insignificant 1.000000 1.0000e+00 insignificant -0.086052 0.47122833 insignificant 1.000000 insignificant chr2 6830079 6831079 14391 ENSG00000205837 0.19904 197 9 0.21486 164 8 0.14375 129 9 0.22667 92 5 0.23909 95 8 0.24156 285 10 0.19632 105 9 0.25552 200 9 0.24936 174 10 0.18069 177 9 0.27223 106 8 0.19286 132 9 0.11426 182 9 0.12941 104 9 0.15695 176 9 0.26061 54 5 0.059259 51 6 0.130697 136 5 0.11565 83 4 0.22939 185 10 0.043478 49 3 0.102326 141 7 0.13353 74 5 0.20588 111 7 0.17748 68 4 0.30045 193 9 0.096633 114 5 0.13814 94 5 0.27617 96 5 0.13193 253 10 0.22797 187 9 0.19357 212 10 0.10432 170 10 0.000000 67 4 0.0000000 63 4 0.000000 29 2 0.09929 155 10 0.15991 140 9 0.030093 207 5 0.19695 103 5 0.1339869 117 5 0.214636 137 5 0.090377 142 5 0.25649 0.18926 0.24418 0.30634 0.184368 0.27131 0.17462 0.34879 0.23256 0.339627 0.34473 0.28918 0.088902 0.20306 0.178167 0.19433 0.025101 0.121352 0.147239 0.187581 0.18561 0.0108276 0.29341 0.11186 0.28022 0.225286 0.233834 0.118396 0.31639 0.167076 0.206534 0.15214 0.13014 0.0046375 0.0082835 0.000000 0.11835 0.330028 0.031630 0.17665 0.156585 0.15146 0.062504 3 0.19880 0.17076 0.0227600 9 0.16563 0.22474 -0.0591058 6.7009e-01 0.98875719 insignificant 1.00000000 1.00000 insignificant 0.39208078 0.98055580 insignificant 1.00000 1.00000 insignificant 0.02144649 0.412836 insignificant 1 insignificant 0.19880 0.12500 0.0884660 8 0.16563 0.064125 0.1015056 4.3228e-07 0.3908196 weaklyHypermeth 9.8246e-06 1 weaklyHypermeth 3.1904e-03 0.8787769 weaklyHypermeth 5.9082e-02 1 weaklyHypermeth 0.129822 3.9681e-03 weaklyHypermeth 0.1417188 insignificant 0.19880 0.120397 0.1108762 5 0.16563 0.117119 0.0485114 5.1984e-02 9.9093e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9538e-02 0.99996686 insignificant 1.0000e+00 1.00000 insignificant 0.0572011 1.7504e-01 insignificant 1.0000e+00 insignificant 0.17076 0.12500 0.0617236 8 0.22474 0.064125 0.1606114 2.8632e-03 0.20842386 weaklyHypermeth 3.9881e-02 1.00000 weaklyHypermeth 4.7441e-02 0.628244 weaklyHypermeth 6.9766e-01 1 insignificant 0.10837538 1.1763e-02 weaklyHypermeth 0.3426764 insignificant 0.17076 0.120397 0.0792338 5 0.22474 0.117119 0.1076173 4.7551e-01 0.99518256 insignificant 1.0000e+00 1.00000 insignificant 6.1742e-01 0.999303 insignificant 1.0000e+00 1 insignificant 0.0357546 0.40427136 insignificant 1.00000 insignificant 0.12500 0.120397 0.0100899 5 0.064125 0.117119 -0.052994 8.7142e-01 2.5763e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.7972e-01 4.4305e-01 insignificant 1.000000 1.0000e+00 insignificant -0.072621 0.13886303 insignificant 1.000000 insignificant chr2 7322012 7323012 14416 ENSG00000223145 0.89359 314 8 0.89681 377 8 0.57491 119 7 0.91596 218 8 1.00000 45 6 0.89582 396 8 0.77976 32 1 0.86941 227 7 0.77482 108 7 0.92305 116 7 0.87459 373 8 0.95238 39 6 0.92765 340 8 0.91525 149 8 0.87822 206 7 1.00000 11 1 0.500000 2 0 0.804238 400 8 0.95524 287 8 0.92715 335 8 0.876166 85 7 0.942092 100 7 0.75419 188 8 0.97253 61 4 0.97049 75 7 0.92952 436 8 0.880147 146 8 0.86458 30 2 0.86956 345 8 0.93582 556 8 0.93324 495 8 0.93238 339 8 0.71654 411 8 0.468862 141 8 0.7684793 445 8 0.800000 16 2 0.71933 163 8 0.72153 488 8 0.827303 186 8 0.89081 280 8 0.9008456 231 8 0.828299 114 8 0.861989 269 8 0.91198 0.89851 0.63313 0.93650 1.000000 0.91088 0.85563 0.91553 0.80730 0.914816 0.89358 0.95525 0.953524 0.91915 0.950495 0.98321 0.797515 0.836079 0.952722 0.939708 0.91861 0.9390332 0.91368 0.98194 0.95931 0.938679 0.857475 0.952760 0.89828 0.958554 0.933479 0.94671 0.73290 0.4581323 0.7831410 0.721567 0.74444 0.710758 0.872850 0.91794 0.925400 0.94007 0.890806 1 0.89179 0.92084 -0.0295093 8 0.88855 0.91564 -0.0270859 9.9547e-01 0.02421482 weaklyHypometh 1.00000000 1.00000 insignificant 0.97081521 0.06157854 insignificant 1.00000 1.00000 insignificant -0.04211692 0.217576 insignificant 1 insignificant 0.89179 0.60577 0.2212465 8 0.88855 0.711120 0.1774294 1.0458e-14 0.9892155 hypermethylated 4.5468e-13 1 hypermethylated 6.3602e-05 0.9871590 hypermethylated 2.1917e-03 1 hypermethylated 0.163818 1.6965e-02 weaklyHypermeth 0.3826398 insignificant 0.89179 0.883333 0.0052106 8 0.88855 0.871433 0.0171169 3.8934e-01 8.0120e-01 insignificant 1.0000e+00 1.000000 insignificant 2.5629e-01 0.95304920 insignificant 1.0000e+00 1.00000 insignificant 0.0010925 9.7333e-01 insignificant 1.0000e+00 insignificant 0.92084 0.60577 0.2605759 8 0.91564 0.711120 0.2045152 1.8607e-13 0.99951710 hypermethylated 1.0945e-11 1.00000 hypermethylated 3.6873e-05 0.992721 hypermethylated 1.9407e-03 1 hypermethylated 0.20593466 6.1016e-03 weaklyHypermeth 0.1968265 insignificant 0.92084 0.883333 0.0360205 8 0.91564 0.871433 0.0442028 1.4494e-02 0.99142867 weaklyHypermeth 3.9174e-01 1.00000 insignificant 3.0111e-02 0.996572 weaklyHypermeth 7.7207e-01 1 insignificant 0.0432094 0.08550807 insignificant 1.00000 insignificant 0.60577 0.883333 -0.2171142 8 0.711120 0.871433 -0.160312 9.4228e-01 2.6632e-05 hypomethylated 1.00000000 1.2682e-03 hypomethylated 8.5628e-01 1.6114e-02 weaklyHypometh 1.000000 4.2406e-01 insignificant -0.162725 0.01800569 weaklyHypometh 0.600190 insignificant chr2 8595587 8596587 14508 ENSG00000220722 0.93064 74 5 0.90432 113 5 0.95000 64 5 0.95000 28 3 0.96095 66 5 0.96660 83 5 0.94238 128 5 0.84012 60 5 0.91405 73 5 0.90598 90 5 0.93805 127 5 0.91451 93 5 0.86722 117 5 NA 0 0 0.94156 98 5 0.96630 132 5 0.901852 83 5 0.883333 18 1 0.89953 71 5 0.88752 100 5 0.834231 54 4 0.966667 20 3 0.93061 133 5 0.90598 57 5 1.00000 8 0 0.83046 89 5 0.822795 62 5 0.93333 39 4 0.78688 43 5 0.93919 96 5 0.88347 115 5 0.93902 177 5 0.94424 99 5 0.872741 90 5 0.8000000 102 3 0.677778 58 5 0.84150 65 5 0.85654 80 5 0.882308 80 5 0.88103 127 5 0.8547619 21 1 0.920667 75 5 0.885897 44 3 0.93228 0.90035 0.93870 0.96522 0.951097 0.96463 0.95029 0.84431 0.91654 0.919008 0.93839 0.92375 0.858823 NA 0.940975 0.96773 0.920370 0.921739 0.883865 0.899102 0.83783 0.9463768 0.91938 0.89367 1.00000 0.822571 0.809155 0.938406 0.78994 0.937799 0.862787 0.93195 0.93701 0.8899482 0.8695652 0.700773 0.84945 0.861304 0.908785 0.88051 0.864907 0.91861 0.842754 2 0.92274 0.89250 0.0302982 5 0.92152 0.89877 0.0227431 6.3208e-03 0.95927698 weaklyHypermeth 1.00000000 1.00000 insignificant 0.05490499 0.88859225 insignificant 1.00000 1.00000 insignificant 0.02148762 0.314259 lowCoverage 1 lowCoverage 0.92274 0.88259 0.0409944 5 0.92152 0.866312 0.0552029 4.9267e-02 0.9219806 weaklyHypermeth 5.5356e-01 1 insignificant 9.3873e-02 0.9203738 insignificant 1.0000e+00 1 insignificant 0.087073 6.2100e-02 lowCoverage 0.9268706 lowCoverage 0.92274 0.887608 0.0383828 5 0.92152 0.878831 0.0426844 9.0351e-03 8.8173e-01 weaklyHypermeth 2.5075e-01 1.000000 insignificant 6.9709e-02 0.67218201 insignificant 1.0000e+00 1.00000 insignificant 0.0342732 2.8359e-02 lowCoverage 9.6329e-01 lowCoverage 0.89250 0.88259 0.0115393 5 0.89877 0.866312 0.0324599 2.2657e-01 0.16371823 insignificant 1.0000e+00 1.00000 insignificant 3.3930e-01 0.287107 insignificant 1.0000e+00 1 insignificant 0.06558569 1.4975e-01 lowCoverage 1.0000000 lowCoverage 0.89250 0.887608 0.0051901 5 0.89877 0.878831 0.0199414 8.9466e-02 0.53596002 insignificant 1.0000e+00 1.00000 insignificant 3.3724e-01 0.580622 insignificant 1.0000e+00 1 insignificant 0.0127855 0.56499351 lowCoverage 1.00000 lowCoverage 0.88259 0.887608 0.0016101 5 0.866312 0.878831 -0.012519 5.9847e-01 5.0232e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.7285e-01 4.8687e-01 insignificant 1.000000 1.0000e+00 insignificant -0.052800 0.21438788 lowCoverage 1.000000 lowCoverage chr2 8674702 8675702 14510 ENSG00000182367 0.94046 175 7 0.88662 108 5 0.87302 38 3 0.94253 173 7 0.76446 39 4 0.90094 226 7 0.76871 32 5 0.92465 51 5 0.87351 43 5 0.96000 17 3 0.83227 154 7 1.00000 15 0 0.98214 39 4 1.00000 19 0 0.97143 25 2 0.33333 5 0 NA 0 0 0.916883 130 7 0.86508 83 7 0.94168 141 7 1.000000 27 2 0.952381 26 3 0.96173 45 7 0.83929 47 5 0.77313 192 7 0.92499 146 7 0.869048 15 0 0.80556 16 2 0.81154 72 6 0.96549 145 7 0.95944 112 7 0.89056 178 7 0.88616 123 7 0.809524 97 7 0.8000000 52 4 0.992000 125 5 0.83191 89 7 0.88996 190 7 0.935196 201 7 0.88508 174 7 0.9845779 140 7 0.967532 84 5 0.959609 162 7 0.93709 0.93448 0.90544 0.95172 0.845111 0.89993 0.72442 0.86439 0.78951 0.959659 0.80778 1.00000 0.986702 1.00000 0.953191 0.72226 NA 0.938104 0.869740 0.937490 1.00000 0.9645390 0.96771 0.71011 0.94699 0.919316 0.849291 0.852777 0.92046 0.947704 0.973492 0.90556 0.86314 0.7843972 0.8865456 0.960521 0.85923 0.930974 0.947367 0.90497 0.980537 0.97582 0.935347 0 0.89881 0.92458 -0.0243580 7 0.78904 0.80930 -0.0202557 9.9602e-01 0.17993641 insignificant 1.00000000 1.00000 insignificant 0.99285815 0.23706073 insignificant 1.00000 1.00000 insignificant -0.01832120 0.653603 lowCoverage 1 lowCoverage 0.89940 0.89497 0.0115235 7 0.90176 0.896665 0.0050993 2.2448e-01 0.1442410 insignificant 1.0000e+00 1 insignificant 1.9441e-01 0.7532129 insignificant 1.0000e+00 1 insignificant 0.009514 8.3427e-01 lowCoverage 1.0000000 lowCoverage 0.89940 0.939553 -0.0372378 7 0.90176 0.937964 -0.0362001 9.8744e-01 1.0715e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3431e-01 0.34174778 insignificant 1.0000e+00 1.00000 insignificant -0.0686254 8.5977e-02 lowCoverage 1.0000e+00 lowCoverage 0.92640 0.89497 0.0246213 7 0.92491 0.896665 0.0282486 1.5813e-01 0.46783243 insignificant 1.0000e+00 1.00000 insignificant 8.7380e-02 0.958286 insignificant 1.0000e+00 1 insignificant 0.02783520 4.6092e-01 insignificant 1.0000000 insignificant 0.92640 0.939553 -0.0117167 7 0.92491 0.937964 -0.0130507 7.0840e-01 0.27674625 insignificant 1.0000e+00 1.00000 insignificant 3.9448e-01 0.747170 insignificant 1.0000e+00 1 insignificant -0.0503042 0.09155917 insignificant 1.00000 insignificant 0.89497 0.939553 -0.0405458 7 0.896665 0.937964 -0.041299 7.4626e-01 9.2177e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.1471e-01 5.9049e-02 insignificant 1.000000 1.0000e+00 insignificant -0.078139 0.05046509 insignificant 1.000000 insignificant chr2 8698464 8699464 14511 ENSG00000182367 0.69548 280 10 0.69262 352 10 0.81614 90 10 0.59227 103 10 0.74629 152 10 0.80007 260 10 0.78791 136 10 0.78090 218 10 0.62615 101 10 0.71997 95 9 0.85086 419 10 0.96667 45 4 0.43482 280 10 0.83203 97 7 0.74891 197 10 0.90000 38 1 0.562500 14 0 0.570762 196 10 0.75435 181 10 0.45242 355 10 0.819845 101 10 0.853968 31 4 0.67540 169 10 0.65453 182 10 0.66667 23 0 0.66342 463 10 0.665045 276 10 0.74894 70 6 0.61664 209 10 0.64541 493 10 0.27403 678 10 0.87590 326 10 0.17236 418 10 0.197086 310 10 0.4480880 683 7 0.066667 44 5 0.21184 395 10 0.14459 635 10 0.135632 520 10 0.73608 322 10 0.4546202 154 10 0.631786 307 9 0.382331 264 10 0.71283 0.71571 0.83006 0.61393 0.702817 0.78247 0.80000 0.78360 0.65280 0.727446 0.86043 0.97266 0.464655 0.82026 0.756453 0.91711 0.618595 0.617991 0.768607 0.452480 0.80035 0.7471081 0.68342 0.64748 0.72663 0.674310 0.662146 0.775998 0.62238 0.650469 0.283104 0.88103 0.18957 0.1969484 0.4256965 0.146278 0.21589 0.153069 0.129210 0.73741 0.474154 0.64430 0.367327 1 0.69642 0.58954 0.1064418 10 0.69705 0.59424 0.1028008 1.4535e-04 0.99999915 weaklyHypermeth 0.07267572 1.00000 weaklyHypermeth 0.32687956 0.97995857 insignificant 1.00000 1.00000 insignificant 0.03657376 0.510805 insignificant 1 insignificant 0.69642 0.26117 0.4499723 10 0.69705 0.238737 0.4583089 3.2865e-43 1.0000000 hypermethylated 1.0955e-40 1 hypermethylated 1.8311e-20 1.0000000 hypermethylated 1.8311e-17 1 hypermethylated 0.509786 1.7207e-05 hypermethylated 0.0017207 hypermethylated 0.69642 0.421825 0.2629065 10 0.69705 0.445802 0.2512438 1.7823e-12 1.0000e+00 hypermethylated 2.5461e-10 1.000000 hypermethylated 2.6962e-08 0.99999934 hypermethylated 6.7404e-06 1.00000 hypermethylated 0.2484671 7.3795e-02 insignificant 1.0000e+00 insignificant 0.58954 0.26117 0.3394303 10 0.59424 0.238737 0.3555082 1.9425e-18 1.00000000 hypermethylated 1.9425e-16 1.00000 hypermethylated 1.7885e-15 1.000000 hypermethylated 8.9427e-13 1 hypermethylated 0.47321247 1.7703e-05 hypermethylated 0.0019670 hypermethylated 0.58954 0.421825 0.1598734 10 0.59424 0.445802 0.1484430 2.5570e-03 0.99994009 weaklyHypermeth 8.5234e-02 1.00000 weaklyHypermeth 1.4449e-04 0.999994 weaklyHypermeth 9.6327e-03 1 weaklyHypermeth 0.2118933 0.11463427 insignificant 1.00000 insignificant 0.26117 0.421825 -0.1694173 10 0.238737 0.445802 -0.207065 9.9962e-01 2.3197e-05 weaklyHypometh 1.00000000 1.1598e-03 weaklyHypometh 1.0000e+00 5.5730e-05 weaklyHypometh 1.000000 6.9663e-03 weaklyHypometh -0.261319 0.06634689 insignificant 1.000000 insignificant chr2 10220258 10221258 14528 ENSG00000206647 0.82937 377 9 0.68160 284 9 0.83348 336 9 0.80115 309 8 0.87891 132 9 0.74512 372 9 0.74889 225 9 0.84805 211 8 0.72381 289 9 0.76526 327 9 0.78497 300 9 0.82860 231 9 0.78662 305 9 0.78220 172 6 0.71875 335 9 0.80754 265 9 0.814437 122 8 0.765590 490 9 0.86005 241 9 0.73193 260 9 0.663818 135 8 0.533176 188 8 0.78813 253 9 0.75280 138 9 0.71116 105 8 0.85566 291 9 0.715085 174 9 0.86784 236 9 0.78445 229 9 0.84903 332 9 0.83275 290 9 0.80797 236 8 0.85524 226 8 0.660847 142 9 0.8736126 416 7 0.903401 35 4 0.88122 265 8 0.84247 269 9 0.559318 366 9 0.65949 305 9 0.5872170 348 9 0.731875 297 9 0.681301 312 8 0.80994 0.75576 0.81543 0.77788 0.848805 0.82358 0.80708 0.81447 0.76022 0.848867 0.88015 0.82724 0.791675 0.77760 0.819005 0.81388 0.805517 0.684638 0.832259 0.851134 0.70686 0.4789145 0.77435 0.79748 0.73824 0.851848 0.807543 0.884202 0.74149 0.831487 0.812380 0.90999 0.82254 0.5499427 0.8381266 0.863211 0.83580 0.832446 0.426952 0.54981 0.525584 0.67175 0.589918 7 0.80064 0.79287 0.0114407 9 0.76041 0.75066 0.0097550 6.4591e-01 0.81564442 insignificant 1.00000000 1.00000 insignificant 0.77811619 0.59207710 insignificant 1.00000 1.00000 insignificant 0.02332758 0.452314 insignificant 1 insignificant 0.80064 0.79305 0.0026951 9 0.76041 0.846938 -0.0865252 2.1916e-02 0.0024069 weaklyHypermeth 2.6091e-01 1 insignificant 5.9845e-01 0.0021666 inconclusive 1.0000e+00 1 insignificant -0.049315 2.4067e-01 insignificant 1.0000000 insignificant 0.80194 0.592752 0.2585627 9 0.81316 0.640703 0.1724532 8.6871e-22 2.4492e-01 hypermethylated 4.3436e-19 1.000000 hypermethylated 1.8108e-06 0.23047471 hypermethylated 1.8108e-04 1.00000 hypermethylated 0.1429761 7.4454e-03 weaklyHypermeth 3.9186e-01 insignificant 0.79287 0.79305 -0.0089841 9 0.75066 0.846938 -0.0962802 3.2066e-01 0.01262179 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.3797e-01 0.024699 weaklyHypometh 1.0000e+00 1 insignificant -0.07264295 1.3967e-01 insignificant 1.0000000 insignificant 0.79454 0.592752 0.2288382 9 0.80629 0.640703 0.1655825 8.6903e-08 0.57748039 hypermethylated 6.6848e-06 1.00000 hypermethylated 2.0009e-05 0.497173 hypermethylated 2.2233e-03 1 hypermethylated 0.1196486 0.01665241 weaklyHypermeth 0.75693 insignificant 0.79290 0.592752 0.2689688 9 0.829931 0.640703 0.189227 1.2901e-06 5.3024e-01 hypermethylated 0.00064503 1.0000e+00 hypermethylated 3.1782e-04 9.2689e-01 hypermethylated 0.095026 1.0000e+00 hypermethylated 0.192292 0.00303237 weaklyHypermeth 0.205672 insignificant chr2 10617026 10618026 14532 ENSG00000217258 0.69148 226 6 0.77279 217 6 0.72170 209 6 0.92783 245 6 0.83478 84 6 0.72510 317 6 0.77796 154 6 0.78456 222 6 0.78497 163 6 0.83099 183 6 0.83548 227 6 0.71732 107 5 0.91868 190 6 0.78889 64 5 0.75155 211 6 0.78182 74 5 0.887273 60 4 0.768329 264 6 0.93757 165 6 0.73911 238 6 0.927249 68 6 0.798449 120 6 0.89054 211 6 0.96639 111 6 0.69390 138 6 0.89765 285 6 0.717021 111 6 0.74277 112 5 0.75512 183 6 0.94303 357 6 0.92980 285 6 0.81209 241 6 0.83986 226 6 0.565505 126 5 0.6744186 49 2 0.643254 41 4 0.80212 132 6 0.57038 279 6 0.723434 280 6 0.82854 265 6 0.8273099 247 6 0.913049 224 6 0.821080 233 6 0.69365 0.77196 0.75075 0.92403 0.833678 0.74788 0.75062 0.78109 0.81002 0.837836 0.83678 0.73728 0.899116 0.85742 0.797698 0.79444 0.819138 0.773838 0.929507 0.741166 0.91845 0.7870476 0.85842 0.93710 0.69412 0.912395 0.686605 0.735943 0.79631 0.938431 0.915585 0.80898 0.85890 0.7062229 0.4219981 0.712440 0.84667 0.666407 0.740663 0.84637 0.838932 0.91423 0.822000 6 0.82569 0.88052 -0.0487574 6 0.80116 0.86385 -0.0626923 9.9941e-01 0.00103686 weaklyHypometh 1.00000000 0.20737 insignificant 0.98293542 0.04039897 weaklyHypometh 1.00000 1.00000 insignificant -0.04059098 0.225831 insignificant 1 insignificant 0.82569 0.75615 0.0927681 6 0.80116 0.699368 0.1017940 1.2226e-04 0.5342056 weaklyHypermeth 2.0722e-03 1 weaklyHypermeth 1.5711e-01 0.2944264 insignificant 1.0000e+00 1 insignificant 0.116317 5.7180e-02 lowCoverage 0.8796905 lowCoverage 0.82569 0.828663 -0.0168658 6 0.80116 0.815816 -0.0146540 7.3140e-01 1.5061e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1644e-01 0.13801752 insignificant 1.0000e+00 1.00000 insignificant -0.0237733 5.1036e-01 insignificant 1.0000e+00 insignificant 0.88052 0.75615 0.1308960 6 0.86385 0.699368 0.1644863 2.7290e-04 0.65831186 weaklyHypermeth 4.9537e-03 1.00000 weaklyHypermeth 8.1736e-02 0.335102 insignificant 1.0000e+00 1 insignificant 0.15690818 1.9634e-02 lowCoverage 0.4268261 lowCoverage 0.88052 0.828663 0.0285474 6 0.86385 0.815816 0.0480384 3.7869e-02 0.71030197 weaklyHypermeth 8.8067e-01 1.00000 insignificant 3.5444e-01 0.350014 insignificant 1.0000e+00 1 insignificant 0.0168176 0.69033706 insignificant 1.00000 insignificant 0.75615 0.828663 -0.1116906 6 0.699368 0.815816 -0.116448 1.8865e-01 6.3944e-02 insignificant 1.00000000 1.0000e+00 insignificant 6.3317e-01 3.5049e-01 insignificant 1.000000 1.0000e+00 insignificant -0.140091 0.03617376 lowCoverage 0.917000 lowCoverage chr2 11080585 11081585 14539 KCNF1 ENSG00000162975 0.80335 280 10 0.86368 502 10 0.88627 359 10 0.94160 281 10 0.92002 227 9 0.90448 567 10 0.92726 263 10 0.87598 287 10 0.71584 164 8 0.97017 308 10 0.88767 449 10 0.77160 115 7 0.75208 314 10 0.95419 170 8 0.83200 407 9 0.88963 151 7 0.785714 16 0 0.883262 301 10 0.73974 404 10 0.88133 468 10 0.719783 153 8 0.850079 198 10 0.91092 276 10 0.68750 113 7 0.92313 125 8 0.84573 448 8 0.635858 373 10 0.50946 128 10 0.89540 452 10 0.92290 639 10 0.84215 510 10 0.80038 457 10 0.71832 412 10 0.792175 275 8 0.9969512 401 8 0.882716 40 4 0.64339 251 10 0.83211 486 10 0.919159 430 10 0.90581 313 10 0.9267843 263 10 0.907899 251 8 0.914515 247 10 0.89851 0.89180 0.88222 0.94630 0.877801 0.89543 0.94558 0.85929 0.89602 0.957989 0.87090 0.89954 0.882769 0.95819 0.918519 0.98053 NA 0.910280 0.883523 0.903166 0.92282 0.8724009 0.93053 0.80246 0.92641 0.901861 0.839519 0.842492 0.88799 0.922863 0.915976 0.89955 0.86909 0.8672961 0.9979330 0.934505 0.81801 0.953690 0.927857 0.92881 0.929183 0.91189 0.903627 7 0.90022 0.89291 0.0075639 10 0.86575 0.64122 0.2245273 4.4493e-01 0.99427620 insignificant 1.00000000 1.00000 insignificant 0.28160702 0.99977192 insignificant 1.00000 1.00000 insignificant 0.06401830 0.141265 insignificant 1 insignificant 0.90007 0.90129 -0.0018416 10 0.83890 0.642159 0.1967394 2.7805e-01 0.5983631 insignificant 1.0000e+00 1 insignificant 3.8718e-01 0.6945591 insignificant 1.0000e+00 1 insignificant 0.048350 3.9947e-01 insignificant 1.0000000 insignificant 0.90020 0.914894 -0.0175067 10 0.82577 0.919110 -0.0933396 9.8619e-01 5.1830e-02 insignificant 1.0000e+00 1.000000 insignificant 7.2730e-01 0.09638223 insignificant 1.0000e+00 1.00000 insignificant -0.0555391 3.8891e-03 weaklyHypometh 2.5927e-01 insignificant 0.89214 0.90134 -0.0119058 10 0.60679 0.664524 -0.0577333 4.7320e-01 0.56946928 insignificant 1.0000e+00 1.00000 insignificant 9.3792e-01 0.443996 insignificant 1.0000e+00 1 insignificant -0.01566846 8.0906e-01 insignificant 1.0000000 insignificant 0.89646 0.914894 -0.0219007 10 0.81897 0.919110 -0.1001419 9.4058e-01 0.04259489 weaklyHypometh 1.0000e+00 1.00000 insignificant 6.7687e-01 0.042225 weaklyHypometh 1.0000e+00 1 insignificant -0.1195574 0.00903138 weaklyHypometh 0.54095 insignificant 0.90605 0.914894 -0.0165067 10 0.830217 0.919110 -0.088893 8.4973e-01 5.5503e-02 insignificant 1.00000000 9.7373e-01 insignificant 8.1767e-01 4.3437e-01 insignificant 1.000000 1.0000e+00 insignificant -0.103889 0.09597423 insignificant 1.000000 insignificant chr2 11133833 11134833 14541 KCNF1 ENSG00000162975 0.76427 318 7 0.64477 173 7 0.72380 124 7 0.90320 182 7 0.49909 50 4 0.73467 286 7 0.74813 159 7 0.80813 141 7 0.66596 111 7 0.70852 144 7 0.81433 266 7 0.64464 94 6 0.79908 144 7 0.78571 14 2 0.84002 131 7 0.78401 106 6 0.740029 103 6 0.659855 111 3 0.80003 195 7 0.71202 283 7 0.724129 178 6 0.787319 131 7 0.74823 154 7 0.67722 177 7 0.73598 72 5 0.68036 114 7 0.660745 215 7 0.67111 209 6 0.78725 148 7 0.76709 180 7 0.78538 198 7 0.76903 322 7 0.75981 171 7 0.582349 112 7 0.5812288 187 7 0.637055 92 6 0.59489 406 7 0.70062 198 7 0.852552 284 7 0.82249 275 7 0.8225210 183 7 0.892794 260 7 0.654126 220 7 0.80554 0.68589 0.74616 0.93919 0.518540 0.77020 0.76756 0.80192 0.74628 0.734133 0.85670 0.66348 0.831872 0.76528 0.836431 0.74793 0.711596 0.707151 0.833845 0.770421 0.75904 0.8276833 0.78300 0.72369 0.79265 0.810699 0.709689 0.667237 0.84389 0.762294 0.838259 0.82547 0.73704 0.6485786 0.6015474 0.657017 0.65227 0.731227 0.873649 0.84320 0.861753 0.89697 0.717153 6 0.77799 0.75214 0.0234341 7 0.75340 0.67287 0.0805217 1.1043e-01 0.77466931 insignificant 1.00000000 1.00000 insignificant 0.52058045 0.20886070 insignificant 1.00000 1.00000 insignificant 0.00619302 0.800665 insignificant 1 insignificant 0.77817 0.65437 0.1198503 7 0.78507 0.675407 0.1096634 6.0928e-06 1.0000000 weaklyHypermeth 1.2434e-04 1 weaklyHypermeth 8.1123e-03 0.9999928 weaklyHypermeth 1.3750e-01 1 insignificant 0.096355 2.3079e-02 weaklyHypermeth 0.4710096 insignificant 0.77796 0.848609 -0.0676603 7 0.75437 0.823150 -0.0687835 9.9941e-01 1.1445e-03 weaklyHypometh 1.0000e+00 0.572263 insignificant 9.9926e-01 0.00125078 weaklyHypometh 1.0000e+00 0.62539 insignificant -0.0698829 1.7383e-01 insignificant 1.0000e+00 insignificant 0.75250 0.65437 0.0934635 7 0.75698 0.675407 0.0815765 2.0543e-05 0.99993928 weaklyHypermeth 4.3708e-04 1.00000 weaklyHypermeth 1.5957e-04 0.996333 weaklyHypermeth 5.3273e-03 1 weaklyHypermeth 0.09016162 2.8242e-02 weaklyHypermeth 0.5328744 insignificant 0.75227 0.848609 -0.0941674 7 0.72227 0.823150 -0.1008828 9.9997e-01 0.00074089 weaklyHypometh 1.0000e+00 0.74089 insignificant 9.9834e-01 0.014406 weaklyHypometh 1.0000e+00 1 insignificant -0.0760759 0.13837369 insignificant 1.00000 insignificant 0.65408 0.848609 -0.1892195 7 0.629037 0.823150 -0.194113 1.0000e+00 1.0962e-08 weaklyHypometh 1.00000000 1.3702e-06 weaklyHypometh 1.0000e+00 3.5294e-06 weaklyHypometh 1.000000 8.8236e-04 weaklyHypometh -0.166238 0.01171356 weaklyHypometh 0.418342 insignificant chr2 14817268 14818268 14671 FAM84A ENSG00000162981 0.78333 44 5 0.85567 70 5 0.64444 23 3 0.83750 38 2 1.00000 16 0 0.94286 44 5 0.88889 27 2 0.97143 17 1 1.00000 3 0 1.00000 11 0 0.95786 102 5 0.77778 7 0 0.96296 28 3 NA 0 0 0.77778 12 1 NA 0 0 0.900000 56 4 0.800000 9 0 0.94444 32 3 0.90571 41 3 0.892857 21 2 0.555556 7 0 0.95476 33 3 0.95000 17 0 0.33333 3 0 0.86905 59 5 0.898095 41 3 0.83333 5 0 0.87273 32 3 0.93393 63 5 0.97333 56 5 0.96471 60 5 0.78235 47 5 0.593333 38 3 1.0000000 6 1 0.800000 18 1 0.65011 42 4 0.67527 53 5 0.872955 62 5 0.90789 53 4 0.9629630 66 3 0.571429 15 2 0.758571 67 3 0.63542 0.83036 0.39583 0.81250 1.000000 0.89286 0.82294 0.94643 1.00000 1.000000 0.94538 0.75000 0.958333 NA 0.791667 NA 0.812500 1.000000 0.947917 0.827679 0.76786 0.5208333 0.92039 0.90625 0.37500 0.813244 0.822024 0.812500 0.86932 0.887835 0.950000 0.93382 0.77941 0.5625000 0.9235978 0.875000 0.73698 0.528331 0.808523 0.86897 1.000000 0.53571 0.625000 0 0.89138 0.90886 -0.0234651 3 0.89364 0.91784 -0.0242059 9.3053e-01 0.22476140 lowCoverage 1.00000000 1.00000 lowCoverage 0.46435023 0.70818651 lowCoverage 1.00000 1.00000 lowCoverage 0.05017432 0.421007 lowCoverage 1 lowCoverage 0.89138 0.69951 0.1729092 4 0.89364 0.731757 0.1618777 2.3564e-05 0.9930130 lowCoverage 4.4460e-04 1 lowCoverage 1.4427e-03 0.9908022 lowCoverage 3.0696e-02 1 lowCoverage 0.135970 7.3220e-02 lowCoverage 1.0000000 lowCoverage 0.89138 0.878327 0.0364213 5 0.89364 0.857881 0.0357542 3.1985e-01 9.5124e-01 insignificant 1.0000e+00 1.000000 insignificant 4.9821e-02 0.98523730 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0713851 3.7508e-01 lowCoverage 1.0000e+00 lowCoverage 0.90886 0.69951 0.1835329 3 0.91784 0.731757 0.1860836 1.6161e-06 0.99806861 lowCoverage 4.1439e-05 1.00000 lowCoverage 4.4013e-03 0.988519 lowCoverage 8.9823e-02 1 lowCoverage 0.08579529 3.1238e-01 lowCoverage 1.0000000 lowCoverage 0.90886 0.878327 0.0607950 3 0.91784 0.857881 0.0599601 2.7711e-03 0.99683725 lowCoverage 8.9390e-02 1.00000 lowCoverage 1.8776e-02 0.967993 lowCoverage 5.5225e-01 1 lowCoverage 0.0212108 0.81703425 lowCoverage 1.00000 lowCoverage 0.69951 0.878327 -0.1393318 4 0.731757 0.857881 -0.126123 9.4298e-01 1.8426e-02 lowCoverage 1.00000000 3.7604e-01 lowCoverage 9.1747e-01 1.2103e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.064584 0.49902682 lowCoverage 1.000000 lowCoverage chr2 15845725 15846725 14726 DDX1 ENSG00000079785 0.84871 240 5 0.66051 197 5 0.78187 170 5 0.90013 259 4 0.83638 116 4 0.91342 311 5 0.82077 108 5 0.90484 203 5 0.87281 177 5 0.90439 120 5 0.82789 174 5 0.83314 90 3 0.71560 214 4 0.95151 125 5 0.84848 173 4 0.90588 114 5 0.971429 20 2 0.623670 280 4 0.91103 152 4 0.72383 180 5 0.992593 62 4 0.459276 106 5 0.71501 135 4 0.74845 79 5 0.65729 74 4 0.86354 210 5 0.730539 121 4 0.72781 67 5 0.89307 183 5 0.93532 245 5 0.92262 204 5 0.91813 214 5 0.46921 152 5 0.262852 85 4 0.0000000 22 1 0.461905 15 1 0.36571 159 5 0.45471 162 5 0.568965 176 4 0.69831 151 4 0.4930171 164 4 0.651048 168 4 0.601546 182 5 0.79781 0.78026 0.81692 0.88748 0.840937 0.90159 0.80162 0.90830 0.81725 0.904298 0.89467 0.86445 0.821461 0.93529 0.820006 0.83992 0.972487 0.664014 0.915325 0.872065 0.98121 0.4449946 0.83998 0.85158 0.79295 0.866871 0.819753 0.763346 0.90205 0.926208 0.913368 0.90950 0.30133 0.1881006 NA 0.349030 0.37615 0.389349 0.624634 0.64036 0.568040 0.56880 0.578273 4 0.84283 0.85529 -0.0119017 5 0.69715 0.61566 0.0814896 4.3016e-01 0.83119676 insignificant 1.00000000 1.00000 insignificant 0.48157789 0.90388935 insignificant 1.00000 1.00000 insignificant 0.04084440 0.413248 lowCoverage 1 lowCoverage 0.84283 0.31429 0.5269441 5 0.69715 0.331273 0.3658819 6.7763e-29 0.9999999 hypermethylated 7.5292e-27 1 hypermethylated 7.4954e-10 1.0000000 hypermethylated 1.4991e-07 1 hypermethylated 0.502084 7.2346e-04 lowCoverage 0.0380767 lowCoverage 0.84403 0.593341 0.2503959 4 0.85602 0.580271 0.2757455 4.7387e-21 1.0000e+00 lowCoverage 1.5796e-18 1.000000 lowCoverage 2.1838e-09 0.99999998 lowCoverage 1.0919e-06 1.00000 lowCoverage 0.2352379 6.2980e-04 lowCoverage 5.7254e-02 lowCoverage 0.85529 0.31429 0.5392030 5 0.61566 0.331273 0.2843922 6.4895e-16 1.00000000 hypermethylated 4.6354e-14 1.00000 hypermethylated 1.8975e-07 0.993007 hypermethylated 1.8975e-05 1 hypermethylated 0.46123975 5.5415e-04 lowCoverage 0.0277076 lowCoverage 0.85782 0.593341 0.2678145 4 0.86193 0.580271 0.2816600 1.1302e-11 1.00000000 lowCoverage 3.7674e-09 1.00000 lowCoverage 1.5694e-06 1.000000 lowCoverage 3.1388e-04 1 lowCoverage 0.1943935 0.00384404 lowCoverage 0.42712 lowCoverage 0.31525 0.593341 -0.2705241 4 0.397115 0.580271 -0.183156 7.9921e-01 1.9591e-04 lowCoverage 1.00000000 6.9967e-03 lowCoverage 7.3567e-01 3.0165e-03 lowCoverage 1.000000 1.4053e-01 lowCoverage -0.266846 0.01421455 lowCoverage 0.490157 lowCoverage chr2 15899927 15900927 14733 DDX1 ENSG00000079785 0.84704 137 3 0.52674 101 6 0.81944 26 2 0.82778 86 3 1.00000 13 0 0.90472 103 3 0.75000 14 0 0.82723 80 5 0.77000 13 1 0.94872 32 2 0.90053 187 6 1.00000 2 0 0.81423 70 6 0.83333 24 2 0.60714 47 2 NA 0 0 0.000000 3 0 0.375820 231 3 0.91355 188 6 0.94639 56 3 0.979167 61 6 0.280000 13 2 0.62500 25 2 0.75000 35 2 0.68224 84 2 0.84237 145 6 0.879887 58 6 1.00000 5 0 0.93409 124 6 0.89389 117 6 0.77964 132 6 0.89899 113 3 0.46371 83 6 0.450063 160 6 0.4642857 102 6 0.498747 40 2 0.60114 64 5 0.87647 162 6 0.162558 81 3 0.23435 102 4 0.0937500 79 3 0.313241 127 3 0.755029 82 3 0.94219 0.55513 0.83871 0.82527 1.000000 0.91062 0.50806 0.82099 0.66935 0.851117 0.92332 0.99391 0.870493 0.75806 0.879032 NA NA 0.583788 0.977917 0.922175 0.99597 0.6774194 0.90726 1.00000 0.90006 0.926590 0.786715 0.988675 0.87023 0.899988 0.884275 0.87096 0.68890 0.5107294 0.4838710 0.494194 0.54127 0.900917 0.439686 0.44649 0.272177 0.42657 0.621873 0 0.80723 0.87267 -0.0696666 3 0.60800 0.76905 -0.1610578 9.8508e-01 0.13809682 lowCoverage 1.00000000 1.00000 lowCoverage 0.95415365 0.21291584 lowCoverage 1.00000 1.00000 lowCoverage -0.02635228 0.745326 lowCoverage 1 lowCoverage 0.80737 0.60720 0.1738896 3 0.67050 0.590425 0.0800713 6.1933e-04 0.9998395 lowCoverage 9.3838e-03 1 lowCoverage 2.5823e-03 0.9999377 lowCoverage 5.0633e-02 1 lowCoverage 0.210019 3.2876e-02 lowCoverage 0.5977493 lowCoverage 0.80737 0.384289 0.4219162 3 0.67050 0.449675 0.2208214 2.4293e-20 9.9998e-01 lowCoverage 6.0732e-18 1.000000 lowCoverage 2.3613e-07 0.99783145 lowCoverage 2.9516e-05 1.00000 lowCoverage 0.4573029 1.2353e-02 lowCoverage 5.6150e-01 lowCoverage 0.87459 0.60656 0.2484520 5 0.87892 0.531915 0.3470047 3.7432e-06 0.99999981 hypermethylated 8.5971e-05 1.00000 hypermethylated 1.1427e-04 1.000000 hypermethylated 4.3948e-03 1 hypermethylated 0.23637080 2.0338e-02 lowCoverage 0.4327213 lowCoverage 0.87459 0.381663 0.5117563 3 0.87892 0.371057 0.5078620 1.7798e-25 1.00000000 lowCoverage 1.7798e-22 1.00000 lowCoverage 3.8294e-07 1.000000 lowCoverage 1.2765e-04 1 lowCoverage 0.4836552 0.00973713 lowCoverage 0.54095 lowCoverage 0.60720 0.384289 0.2470971 3 0.590425 0.449675 0.140750 2.7619e-04 1.0000e+00 lowCoverage 0.05523823 1.0000e+00 lowCoverage 8.7539e-03 9.9953e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.247284 0.11210806 lowCoverage 1.000000 lowCoverage chr2 16374559 16375559 14781 ENSG00000210770 0.40548 140 4 0.50091 251 4 0.54565 111 6 0.35483 134 4 0.36463 135 6 0.44945 303 6 0.38214 175 6 0.57763 199 6 0.33906 197 6 0.34625 142 6 0.56875 247 6 0.70617 68 4 0.14684 148 6 0.45198 89 6 0.30048 166 4 0.31667 57 3 0.375000 15 1 0.054318 124 2 0.36001 140 2 0.29565 247 6 0.591489 84 4 0.060813 128 6 0.54561 113 6 0.17696 103 6 0.27007 55 2 0.11637 302 6 0.199246 207 6 0.09213 118 4 0.50221 111 4 0.19078 400 6 0.22235 277 6 0.24087 243 6 0.49835 187 6 0.441253 79 5 1.0000000 12 1 0.222222 21 1 0.50561 185 6 0.21389 222 6 0.017427 207 4 0.00000 147 4 0.0045045 133 4 0.014085 115 2 0.100180 140 4 0.24853 0.17671 0.25784 0.19160 0.071645 0.15932 0.16647 0.16999 0.11204 0.093757 0.32662 0.27469 0.023820 0.12290 0.065792 0.19284 0.175620 0.093402 0.071565 0.064294 0.24125 0.0083628 0.22638 0.13485 0.08404 0.059356 0.059173 0.010331 0.17750 0.055062 0.062512 0.23480 0.25449 0.2512512 0.7585672 0.164288 0.41237 0.044327 0.016979 0.00000 0.017534 0.03655 0.069131 2 0.25518 0.16449 0.1000920 6 0.44821 0.15383 0.2943752 4.7829e-07 0.99999992 weaklyHypermeth 0.00047829 1.00000 weaklyHypermeth 0.00019882 0.99999973 weaklyHypermeth 0.19882 1.00000 insignificant 0.12468681 0.056148 lowCoverage 1 lowCoverage 0.25502 0.33191 -0.0429778 6 0.44174 0.449430 -0.0076933 2.9927e-01 0.0017996 weaklyHypometh 1.0000e+00 1 insignificant 8.6922e-01 0.2773250 insignificant 1.0000e+00 1 insignificant -0.088126 4.9633e-01 lowCoverage 1.0000000 lowCoverage 0.25342 0.024259 0.1771889 4 0.38898 0.030092 0.3588895 7.0215e-15 1.0000e+00 lowCoverage 1.4043e-12 1.000000 lowCoverage 1.3937e-09 1.00000000 lowCoverage 1.0919e-06 1.00000 lowCoverage 0.3648564 1.9829e-09 lowCoverage 1.9829e-06 lowCoverage 0.16464 0.33144 -0.1552923 6 0.15383 0.399493 -0.2456582 1.0000e+00 0.00082847 weaklyHypometh 1.0000e+00 0.82847 insignificant 9.9998e-01 0.052841 insignificant 1.0000e+00 1 insignificant -0.21281294 1.3990e-01 lowCoverage 1.0000000 lowCoverage 0.16526 0.024259 0.0993941 4 0.23075 0.030092 0.2006600 8.1872e-08 0.99999908 lowCoverage 6.6848e-06 1.00000 lowCoverage 1.4853e-07 1.000000 lowCoverage 7.4264e-05 1 lowCoverage 0.2401696 0.00072254 lowCoverage 0.15669 lowCoverage 0.33144 0.024259 0.2528611 4 0.432573 0.030092 0.402481 1.0344e-07 1.0000e+00 lowCoverage 0.00010344 1.0000e+00 lowCoverage 2.3890e-06 1.0000e+00 lowCoverage 0.002389 1.0000e+00 lowCoverage 0.452983 0.01120907 lowCoverage 0.418342 lowCoverage chr2 16899259 16900259 14822 ENSG00000209066,ENSG00000219877,ENSG00000221735 0.95104 551 19 0.89352 479 17 0.85508 423 17 0.95495 469 18 0.90967 247 14 0.93267 616 19 0.89787 347 17 0.93906 423 17 0.90080 443 19 0.97614 459 19 0.93611 522 19 0.88346 306 13 0.95539 542 18 0.92073 86 8 0.93787 467 19 0.84388 143 12 0.847906 190 12 0.946235 462 18 0.94116 384 17 0.94142 551 17 0.944827 128 15 0.942938 233 13 0.85263 389 19 0.92895 159 13 0.96914 134 11 0.96191 514 18 0.873270 328 19 0.91621 183 13 0.89828 452 17 0.95663 559 19 0.96910 516 17 0.86080 535 18 0.82206 433 19 0.658153 383 19 0.6289888 578 16 0.813342 113 8 0.72235 263 17 0.81913 423 18 0.967006 809 18 0.95845 600 19 0.9629395 591 18 0.964300 586 18 0.964332 623 18 0.93845 0.88469 0.84742 0.94549 0.925615 0.92827 0.90979 0.92856 0.91876 0.961685 0.93139 0.90454 0.950190 0.91230 0.942159 0.85971 0.925223 0.934872 0.939465 0.924132 0.91678 0.9266813 0.89350 0.94829 0.97265 0.952769 0.930791 0.905608 0.93835 0.944532 0.956541 0.92367 0.76554 0.6347049 0.7061846 0.809546 0.77407 0.809917 0.958407 0.94963 0.959433 0.96555 0.956715 8 0.92639 0.94213 -0.0158175 19 0.93392 0.89554 0.0383751 9.5107e-01 0.00016092 weaklyHypometh 1.00000000 0.10943 insignificant 0.70720251 0.00021287 weaklyHypometh 1.00000 0.20748 insignificant -0.00464137 0.758388 insignificant 1 insignificant 0.92639 0.73415 0.2010568 19 0.93392 0.700953 0.2329660 7.8995e-43 1.0000000 hypermethylated 1.9749e-40 1 hypermethylated 6.9509e-14 1.0000000 hypermethylated 1.7377e-11 1 hypermethylated 0.174245 3.6888e-03 weaklyHypermeth 0.1366210 insignificant 0.92638 0.959801 -0.0333987 18 0.93044 0.964449 -0.0340086 1.0000e+00 1.6813e-05 weaklyHypometh 1.0000e+00 0.016813 weaklyHypometh 9.9779e-01 0.00060239 weaklyHypometh 1.0000e+00 0.60239 insignificant -0.0451562 3.9488e-05 weaklyHypometh 1.3163e-02 weaklyHypometh 0.94213 0.73415 0.2143491 19 0.89554 0.700953 0.1945909 3.6790e-27 0.99999999 hypermethylated 9.1974e-25 1.00000 hypermethylated 1.7770e-15 1.000000 hypermethylated 8.9427e-13 1 hypermethylated 0.17888610 2.7870e-03 weaklyHypermeth 0.0995372 weaklyHypermeth 0.94327 0.959801 -0.0187441 18 0.94268 0.964449 -0.0217718 8.5833e-01 0.02287240 weaklyHypometh 1.0000e+00 1.00000 insignificant 6.0262e-01 0.294516 insignificant 1.0000e+00 1 insignificant -0.0405148 0.00697735 weaklyHypometh 0.53346 insignificant 0.73492 0.959801 -0.2325359 18 0.716792 0.964449 -0.247657 1.0000e+00 2.0699e-17 hypomethylated 1.00000000 5.1748e-15 hypomethylated 1.0000e+00 7.7253e-11 hypomethylated 1.000000 7.7253e-08 hypomethylated -0.219401 0.00158532 weaklyHypometh 0.137886 insignificant chr2 18366367 18367367 14866 ENSG00000212455 0.84932 236 7 0.77143 91 7 0.79657 84 7 0.89654 134 7 0.91905 41 7 0.80000 173 7 0.84090 146 7 0.85042 73 5 0.86122 57 7 0.81292 89 7 0.81722 148 7 0.86607 88 7 0.81861 87 7 NA 0 0 0.88615 73 7 0.85000 34 5 0.748207 102 7 0.835370 110 7 0.84887 109 7 0.83141 177 7 0.766667 37 3 0.922449 50 7 0.85734 127 7 0.80102 30 3 0.87245 43 5 0.83381 133 7 0.925624 43 4 0.69643 28 3 0.79766 62 6 0.77931 103 7 0.82194 102 7 0.81757 334 7 0.72889 80 7 0.819843 92 7 0.8651349 84 7 0.869841 84 7 0.85714 38 4 0.80292 117 7 0.913071 267 7 0.87693 309 7 0.8784448 235 7 0.905725 250 7 0.880794 159 7 0.85920 0.81256 0.80140 0.92208 0.934161 0.80872 0.84110 0.88212 0.85597 0.829012 0.83405 0.86289 0.838686 NA 0.884811 0.87081 0.735372 0.855020 0.835040 0.830752 0.81433 0.9432121 0.86985 0.79947 0.87489 0.851968 0.907542 0.757764 0.85065 0.800858 0.850821 0.82114 0.69350 0.8114114 0.8754724 0.864389 0.84472 0.821813 0.905034 0.88445 0.876824 0.91083 0.898733 3 0.83821 0.83974 0.0014083 7 0.83369 0.82977 0.0039168 4.5860e-01 0.59192875 insignificant 1.00000000 1.00000 insignificant 0.56892299 0.23181286 insignificant 1.00000 1.00000 insignificant 0.01250100 0.560503 insignificant 1 insignificant 0.83821 0.81414 0.0236317 7 0.83369 0.818085 0.0156066 1.9037e-01 0.7945263 insignificant 1.0000e+00 1 insignificant 4.9847e-01 0.4711683 insignificant 1.0000e+00 1 insignificant 0.012894 6.0634e-01 insignificant 1.0000000 insignificant 0.83821 0.891803 -0.0547621 7 0.83369 0.890742 -0.0570508 9.9987e-01 5.2388e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9864e-01 0.01874711 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0541372 3.6705e-04 weaklyHypometh 4.5881e-02 weaklyHypometh 0.83974 0.81414 0.0226797 7 0.82977 0.818085 0.0116899 2.1255e-01 0.57963521 insignificant 1.0000e+00 1.00000 insignificant 4.1336e-01 0.608601 insignificant 1.0000e+00 1 insignificant 0.00039271 9.8936e-01 insignificant 1.0000000 insignificant 0.83974 0.891803 -0.0540480 7 0.82977 0.890742 -0.0609676 9.9978e-01 0.01062350 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.1195e-01 0.238314 insignificant 1.0000e+00 1 insignificant -0.0666382 0.00539079 weaklyHypometh 0.44923 insignificant 0.81414 0.891803 -0.0781679 7 0.818085 0.890742 -0.072657 9.9906e-01 1.6873e-02 weaklyHypometh 1.00000000 3.6268e-01 insignificant 9.0301e-01 9.4894e-02 insignificant 1.000000 1.0000e+00 insignificant -0.067031 0.02683874 weaklyHypometh 0.766821 insignificant chr2 19737944 19738944 15076 OSR1 ENSG00000143867 0.78460 541 8 0.82334 359 8 0.51775 206 8 0.89689 414 9 0.76673 124 6 0.91431 591 8 0.90593 139 6 0.92689 241 8 0.82207 241 8 0.88333 206 8 0.82758 249 8 0.54663 71 6 0.89345 329 8 0.75802 82 4 0.87072 216 8 0.71338 50 4 0.59787 90 6 0.67015 510 8 0.90699 155 8 0.90630 450 8 0.92799 138 8 0.58527 281 8 0.77691 265 8 0.88010 117 8 0.93537 132 8 0.92425 392 9 0.85141 174 8 0.82284 111 8 0.79531 244 8 0.90878 486 8 0.91145 435 8 0.92522 438 9 0.077933 447 8 0.207262 126 6 0.3333333 298 6 0.027778 69 6 0.201324 187 8 0.048947 521 8 0.65862 452 8 0.55804 388 8 0.68583 418 8 0.40100 412 8 0.66493 452 9 0.73675 0.78960 0.57862 0.89605 0.79156 0.89915 0.89458 0.90886 0.82133 0.89493 0.87046 0.62724 0.85347 0.74657 0.87347 0.73155 0.50792 0.65993 0.90435 0.88346 0.90374 0.62313 0.72260 0.90224 0.91475 0.91054 0.85803 0.91951 0.81638 0.91346 0.93090 0.91182 0.081028 0.193274 0.2066034 0.035769 0.23214 0.063023 0.62657 0.53333 0.63468 0.42409 0.70223 6 0.81288 0.86026 -0.0472531 8 0.82684 0.86648 -0.03963903 0.98307 0.12703072 insignificant 1 1.00000 insignificant 0.99897 0.0101573 weaklyHypometh 1 1 insignificant -0.0570953 0.171510 insignificant 1 insignificant 0.81288 0.11893 0.685979 8 0.82684 0.11518 0.711668 2.7508e-63 1.000000 hypermethylated 1.3754e-60 1 hypermethylated 2.0482e-17 1.000000 hypermethylated 1.0241e-14 1 hypermethylated 0.6472176 1.2974e-06 hypermethylated 0.00018535 hypermethylated 0.81288 0.58671 2.2401e-01 8 0.82684 0.57285 0.253990 1.2339e-12 1.000000 hypermethylated 1.7628e-10 1 hypermethylated 2.4622e-08 1.000000 hypermethylated 1.2311e-05 1 hypermethylated 0.2029638 0.013186 weaklyHypermeth 0.62561 insignificant 0.86026 0.11893 0.7361525 8 0.86648 0.11518 0.7513067 1.1137e-54 1.00000 hypermethylated 5.5686e-52 1 hypermethylated 5.0186e-16 1.000000 hypermethylated 2.5093e-13 1 hypermethylated 0.7043129 6.9261e-07 hypermethylated 0.00013852 hypermethylated 0.86026 0.58671 0.27246475 8 0.86648 0.57285 0.2936292 3.3176e-14 1.0000000 hypermethylated 1.6588e-11 1.00000 hypermethylated 2.1888e-10 1.000000 hypermethylated 1.0944e-07 1 hypermethylated 0.26005907 0.0041441 weaklyHypermeth 0.37674 insignificant 0.11893 0.58671 -0.4544991 8 0.11518 0.57285 -0.4576775 1.000000 4.9372e-18 hypomethylated 1 1.2343e-15 hypomethylated 1.0000000 8.3194e-09 hypomethylated 1 2.7731e-06 hypomethylated -0.444254 1.8959e-04 hypomethylated 0.027084 hypomethylated chr2 19738213 19739213 15077 OSR1 ENSG00000143867 0.78460 541 8 0.82334 359 8 0.51775 206 8 0.89689 414 9 0.76673 124 6 0.91431 591 8 0.90593 139 6 0.92689 241 8 0.82207 241 8 0.88333 206 8 0.82758 249 8 0.54663 71 6 0.89345 329 8 0.75802 82 4 0.87072 216 8 0.71338 50 4 0.59787 90 6 0.67015 510 8 0.90699 155 8 0.90630 450 8 0.92799 138 8 0.58527 281 8 0.77691 265 8 0.88010 117 8 0.93537 132 8 0.92425 392 9 0.85141 174 8 0.82284 111 8 0.79531 244 8 0.90878 486 8 0.91145 435 8 0.92522 438 9 0.077933 447 8 0.207262 126 6 0.3333333 298 6 0.027778 69 6 0.201324 187 8 0.048947 521 8 0.65862 452 8 0.55804 388 8 0.68583 418 8 0.40100 412 8 0.66493 452 9 0.73675 0.78960 0.57862 0.89605 0.79156 0.89915 0.89458 0.90886 0.82133 0.89493 0.87046 0.62724 0.85347 0.74657 0.87347 0.73155 0.50792 0.65993 0.90435 0.88346 0.90374 0.62313 0.72260 0.90224 0.91475 0.91054 0.85803 0.91951 0.81638 0.91346 0.93090 0.91182 0.081028 0.193274 0.2066034 0.035769 0.23214 0.063023 0.62657 0.53333 0.63468 0.42409 0.70223 6 0.81288 0.86026 -0.0472531 8 0.82684 0.86648 -0.03963903 0.98307 0.12703072 insignificant 1 1.00000 insignificant 0.99897 0.0101573 weaklyHypometh 1 1 insignificant -0.0570953 0.171510 insignificant 1 insignificant 0.81288 0.11893 0.685979 8 0.82684 0.11518 0.711668 2.7508e-63 1.000000 hypermethylated 1.3754e-60 1 hypermethylated 2.0482e-17 1.000000 hypermethylated 1.0241e-14 1 hypermethylated 0.6472176 1.2974e-06 hypermethylated 0.00018535 hypermethylated 0.81288 0.58671 2.2401e-01 8 0.82684 0.57285 0.253990 1.2339e-12 1.000000 hypermethylated 1.7628e-10 1 hypermethylated 2.4622e-08 1.000000 hypermethylated 1.2311e-05 1 hypermethylated 0.2029638 0.013186 weaklyHypermeth 0.62561 insignificant 0.86026 0.11893 0.7361525 8 0.86648 0.11518 0.7513067 1.1137e-54 1.00000 hypermethylated 5.5686e-52 1 hypermethylated 5.0186e-16 1.000000 hypermethylated 2.5093e-13 1 hypermethylated 0.7043129 6.9261e-07 hypermethylated 0.00013852 hypermethylated 0.86026 0.58671 0.27246475 8 0.86648 0.57285 0.2936292 3.3176e-14 1.0000000 hypermethylated 1.6588e-11 1.00000 hypermethylated 2.1888e-10 1.000000 hypermethylated 1.0944e-07 1 hypermethylated 0.26005907 0.0041441 weaklyHypermeth 0.37674 insignificant 0.11893 0.58671 -0.4544991 8 0.11518 0.57285 -0.4576775 1.000000 4.9372e-18 hypomethylated 1 1.2343e-15 hypomethylated 1.0000000 8.3194e-09 hypomethylated 1 2.7731e-06 hypomethylated -0.444254 1.8959e-04 hypomethylated 0.027084 hypomethylated chr2 19809036 19810036 15084 OSR1 ENSG00000143867 0.89139 283 4 0.95459 178 4 1.00000 21 4 0.87115 232 6 0.62500 24 3 0.79638 305 6 0.69712 41 3 0.91950 99 4 0.79167 19 3 1.00000 21 3 0.88136 148 4 1.00000 2 0 0.92613 65 4 0.83333 38 3 0.94444 32 3 NA 0 0 NA 0 0 0.79781 668 6 0.89104 297 6 0.79832 225 6 0.91111 38 4 0.85227 38 3 0.76809 76 4 1.00000 21 4 0.69687 180 4 0.92395 222 4 0.84009 112 4 1.00000 3 0 0.88799 254 4 0.92155 215 6 0.92526 334 6 0.89993 218 6 0.916429 89 4 0.927702 183 4 1.0000000 234 3 0.235911 108 2 0.748485 41 4 0.490287 359 6 0.81963 120 4 0.95212 194 4 0.72835 245 6 0.71095 210 5 0.74543 138 6 0.86424 0.95459 1.00000 0.95673 0.69418 0.85691 0.69712 0.91950 0.79167 1.00000 0.88136 0.90475 0.92613 0.83333 0.94444 NA NA 0.83632 0.91990 0.86214 0.88889 0.85227 0.97368 1.00000 0.87109 0.92395 0.84009 0.93713 0.88799 0.96549 0.92174 0.94838 0.916429 0.927702 0.9120448 0.650248 0.93561 0.531727 0.89954 0.95212 0.89961 0.69630 0.92450 0 0.87658 0.90797 -0.0314837 6 0.85107 0.90503 -0.05395595 0.99978 0.01515468 weaklyHypometh 1 1.00000 insignificant 0.99912 0.0864213 insignificant 1 1 insignificant -0.0178581 0.615509 lowCoverage 1 lowCoverage 0.87644 0.71838 0.127820 6 0.82625 0.64233 0.183924 8.3888e-05 0.999955 weaklyHypermeth 1.7477e-03 1 weaklyHypermeth 4.2480e-02 0.539238 weaklyHypermeth 7.5858e-01 1 insignificant 0.1479329 2.8477e-01 lowCoverage 1.00000000 lowCoverage 0.87644 0.87140 5.7874e-05 6 0.82625 0.84438 -0.018127 6.9869e-01 0.396183 insignificant 1.0000e+00 1 insignificant 6.2989e-01 0.482375 insignificant 1.0000e+00 1 insignificant 0.0764382 0.176538 lowCoverage 1.00000 lowCoverage 0.90674 0.71696 0.1605729 6 0.83360 0.55057 0.2830336 3.8537e-06 1.00000 weaklyHypermeth 1.4273e-04 1 weaklyHypermeth 5.0566e-02 0.718895 insignificant 8.5705e-01 1 insignificant 0.1657910 2.3707e-01 lowCoverage 1.00000000 lowCoverage 0.90674 0.86865 0.03081105 6 0.83360 0.75947 0.0741332 4.8370e-02 0.9940375 weaklyHypermeth 1.0000e+00 1.00000 insignificant 8.0347e-02 0.994350 insignificant 1.0000e+00 1 insignificant 0.09429625 0.1081367 lowCoverage 1.00000 lowCoverage 0.71696 0.86865 -0.1443110 6 0.55057 0.75947 -0.2089004 0.998981 4.2161e-03 weaklyHypometh 1 1.2175e-01 insignificant 0.4605918 2.4322e-01 insignificant 1 1.0000e+00 insignificant -0.071495 6.0134e-01 lowCoverage 1.000000 lowCoverage chr2 20203012 20204012 15104 LAPTM4A ENSG00000068697 0.88635 538 10 0.63186 325 11 0.81078 214 10 0.87632 486 10 0.82615 129 8 0.85678 607 10 0.83016 166 9 0.88588 319 10 0.81437 240 10 0.88844 242 11 0.76628 408 10 0.62189 85 8 0.86903 391 10 0.91304 83 6 0.83326 232 10 0.56162 45 5 0.68989 79 6 0.70076 541 10 0.88692 308 10 0.82852 447 11 0.80476 125 6 0.82074 256 10 0.89307 275 10 0.74342 183 10 0.78898 228 10 0.87693 420 11 0.78775 269 11 0.76138 103 8 0.85424 284 10 0.75075 505 10 0.87092 405 10 0.83908 527 10 0.701521 305 11 0.769978 236 10 0.6484375 212 8 0.725467 119 9 0.737913 243 10 0.731680 458 10 0.83933 455 10 0.83105 460 10 0.74724 403 10 0.61880 356 10 0.84271 432 10 0.87782 0.73141 0.83227 0.86533 0.79037 0.85728 0.86896 0.89425 0.83194 0.86162 0.83503 0.78049 0.83831 0.88449 0.80910 0.58374 0.72826 0.76386 0.88010 0.84668 0.90247 0.77710 0.88551 0.85888 0.83682 0.85089 0.84922 0.80199 0.83140 0.81817 0.86369 0.86756 0.808417 0.795603 0.7149707 0.747683 0.81020 0.745144 0.83605 0.80306 0.72832 0.61405 0.82599 8 0.84469 0.85503 -0.0058702 10 0.79746 0.76665 0.03081389 0.55181 0.33835972 insignificant 1 1.00000 insignificant 0.76273 0.2073320 insignificant 1 1 insignificant -0.0170871 0.536501 insignificant 1 insignificant 0.84469 0.78195 0.058930 10 0.79746 0.66838 0.129086 3.7574e-08 0.209012 weaklyHypermeth 1.5380e-06 1 weaklyHypermeth 2.0338e-03 0.369700 weaklyHypermeth 5.9818e-02 1 weaklyHypermeth 0.0797487 1.0505e-02 weaklyHypermeth 0.42021868 insignificant 0.84508 0.78110 5.9634e-02 10 0.83640 0.80011 0.036284 3.1292e-04 0.963547 weaklyHypermeth 1.5646e-02 1 weaklyHypermeth 4.0376e-03 0.866059 weaklyHypermeth 2.2431e-01 1 insignificant 0.0230868 0.651484 insignificant 1.00000 insignificant 0.85503 0.78195 0.0759426 10 0.76665 0.66838 0.0982723 3.6122e-06 0.28649 weaklyHypermeth 1.3893e-04 1 weaklyHypermeth 2.6986e-03 0.563044 weaklyHypermeth 7.7103e-02 1 weaklyHypermeth 0.0968357 9.0992e-04 weaklyHypermeth 0.05352497 weaklyHypermeth 0.85530 0.78110 0.05874287 10 0.82271 0.80011 0.0225953 2.1986e-04 0.9092752 weaklyHypermeth 1.2214e-02 1.00000 weaklyHypermeth 5.6152e-04 0.975923 weaklyHypermeth 4.0108e-02 1 weaklyHypermeth 0.04017386 0.4178608 insignificant 1.00000 insignificant 0.78366 0.78110 -0.0073989 10 0.75354 0.80011 -0.0465750 0.070021 2.8125e-02 weaklyHypometh 1 5.7399e-01 insignificant 0.0863685 1.4718e-02 weaklyHypometh 1 6.1323e-01 insignificant -0.056662 2.7238e-01 insignificant 1.000000 insignificant chr2 20259575 20260575 15108 ENSG00000200763 0.90330 159 7 0.73044 218 8 0.87297 153 7 0.90208 162 5 0.93072 101 8 0.94558 285 7 0.85307 140 7 0.84859 212 8 0.87410 115 5 0.90387 82 7 0.83781 354 8 0.88129 82 8 0.88933 153 8 0.70503 130 5 0.87438 192 7 0.67353 87 7 0.75926 31 4 0.80004 227 7 0.90975 263 8 0.80316 168 7 0.78005 81 8 0.62463 89 5 0.88976 120 8 0.78971 180 7 0.62245 45 5 0.90471 267 8 0.81969 117 8 0.73585 147 7 0.92917 173 8 0.91901 302 8 0.89075 234 8 0.87236 256 7 0.337127 235 8 0.378114 153 8 0.4810478 345 8 0.156250 32 3 0.518447 257 8 0.177458 315 8 0.82195 127 7 0.80854 162 7 0.82804 126 5 0.80913 98 7 0.63504 119 6 0.85605 0.65173 0.82907 0.90652 0.90550 0.91730 0.88732 0.83763 0.84573 0.93321 0.81422 0.85007 0.85619 0.70275 0.84241 0.55433 0.71096 0.72037 0.87760 0.88984 0.80583 0.53201 0.88912 0.80226 0.80815 0.87203 0.90861 0.77479 0.88831 0.89686 0.89194 0.87873 0.240645 0.285099 0.4283682 0.066393 0.40894 0.187862 0.75352 0.71047 0.73063 0.72708 0.59817 5 0.83464 0.85480 -0.0187191 8 0.85468 0.86014 -0.00545286 0.86509 0.37250028 insignificant 1 1.00000 insignificant 0.36825 0.7025388 insignificant 1 1 insignificant 0.0300724 0.408464 insignificant 1 insignificant 0.83464 0.35602 0.488884 8 0.85468 0.37361 0.481068 3.1424e-47 1.000000 hypermethylated 7.8560e-45 1 hypermethylated 9.2729e-15 1.000000 hypermethylated 2.3182e-12 1 hypermethylated 0.5035088 2.6099e-04 hypermethylated 0.01864234 hypermethylated 0.83464 0.71835 1.1236e-01 6 0.85468 0.78049 0.074190 1.6800e-04 0.835927 weaklyHypermeth 9.3332e-03 1 weaklyHypermeth 3.7397e-03 0.904158 weaklyHypermeth 2.1998e-01 1 insignificant 0.0643763 0.162852 insignificant 1.00000 insignificant 0.85480 0.35602 0.5203077 8 0.86014 0.37361 0.4865204 2.9241e-32 1.00000 hypermethylated 7.3102e-30 1 hypermethylated 4.3432e-12 1.000000 hypermethylated 1.0858e-09 1 hypermethylated 0.4734364 1.5670e-04 hypermethylated 0.01305820 hypermethylated 0.85480 0.71835 0.12742797 6 0.86014 0.78049 0.0796425 4.1609e-05 0.9116275 weaklyHypermeth 3.2007e-03 1.00000 weaklyHypermeth 2.4032e-03 0.727716 weaklyHypermeth 1.6021e-01 1 insignificant 0.03430398 0.4914227 insignificant 1.00000 insignificant 0.35602 0.71835 -0.3798625 6 0.37361 0.78049 -0.4068780 0.999726 3.2277e-19 hypomethylated 1 1.6139e-16 hypomethylated 0.9999999 2.9703e-08 hypomethylated 1 7.4257e-06 hypomethylated -0.439132 2.8811e-04 hypomethylated 0.030701 hypomethylated chr2 21432595 21433595 15206 ENSG00000218819 0.85818 364 6 0.76682 309 6 0.60762 132 6 0.84629 256 6 0.79647 83 6 0.86611 436 6 0.73520 160 6 0.85054 206 6 0.71628 137 6 0.92727 110 6 0.85585 219 6 0.72566 73 6 0.76711 166 6 0.86344 81 6 0.82415 173 6 0.50833 18 2 0.78750 20 2 0.57073 360 6 0.85943 230 6 0.82447 355 6 0.97817 58 3 0.61249 82 4 0.88839 139 6 0.77783 76 6 0.98246 40 4 0.83560 257 6 0.75928 158 5 0.79544 85 6 0.83813 156 6 0.85445 273 6 0.82672 299 6 0.89759 384 6 0.103818 337 6 0.033216 199 6 0.0013717 627 5 0.000000 13 1 0.055568 327 6 0.329844 384 6 0.65454 529 6 0.70845 337 6 0.74882 350 6 0.59093 467 6 0.60861 332 6 0.86388 0.76845 0.61517 0.84084 0.79701 0.86981 0.85117 0.85541 0.71365 0.92601 0.87727 0.71460 0.76718 0.86561 0.81395 0.61947 0.70790 0.67437 0.85133 0.81936 0.97814 0.60497 0.90353 0.73721 0.97740 0.83321 0.73466 0.81296 0.83539 0.84589 0.82636 0.89379 0.099118 0.033716 0.0014415 0.017119 0.06555 0.324659 0.65653 0.70896 0.75217 0.61691 0.61375 4 0.78421 0.82661 -0.0394125 6 0.69310 0.86750 -0.17439883 0.98904 0.02605641 weaklyHypometh 1 1.00000 insignificant 0.99842 0.0342188 weaklyHypometh 1 1 insignificant -0.0593396 0.127943 insignificant 1 insignificant 0.78461 0.09009 0.683588 6 0.80862 0.12168 0.686941 1.6793e-57 1.000000 hypermethylated 5.5976e-55 1 hypermethylated 5.1082e-16 1.000000 hypermethylated 1.7027e-13 1 hypermethylated 0.6905701 3.4748e-06 hypermethylated 0.00043435 hypermethylated 0.78461 0.48040 2.1774e-01 6 0.80862 0.65406 0.154556 1.6672e-09 0.937947 hypermethylated 2.0840e-07 1 hypermethylated 1.1327e-04 0.877475 hypermethylated 8.7128e-03 1 hypermethylated 0.1156032 0.012824 weaklyHypermeth 0.62561 insignificant 0.82643 0.09009 0.7237712 6 0.84542 0.12168 0.7237401 8.1476e-44 1.00000 hypermethylated 2.7159e-41 1 hypermethylated 9.2655e-15 1.000000 hypermethylated 3.0885e-12 1 hypermethylated 0.7499097 9.2528e-07 hypermethylated 0.00015194 hypermethylated 0.82643 0.48040 0.24785560 6 0.84542 0.65406 0.1913550 1.6834e-10 0.9934365 hypermethylated 2.8057e-08 1.00000 hypermethylated 1.4098e-04 0.993547 hypermethylated 1.5195e-02 1 hypermethylated 0.17494279 0.0013126 weaklyHypermeth 0.20611 insignificant 0.09009 0.48040 -0.4019234 6 0.12168 0.65406 -0.5323851 1.000000 6.9053e-20 hypomethylated 1 6.9053e-17 hypomethylated 1.0000000 5.8387e-09 hypomethylated 1 2.7731e-06 hypomethylated -0.574967 1.1866e-05 hypomethylated 0.011866 hypomethylated chr2 23399703 23400703 15569 ENSG00000210863 0.92194 519 5 0.86525 230 5 0.85286 84 5 0.91268 417 5 0.95000 14 0 0.82945 466 5 0.91023 140 5 0.91715 96 5 0.88657 53 5 0.96000 28 5 0.93685 281 5 0.98000 37 5 0.88620 81 5 0.86389 31 3 0.94286 66 5 1.00000 21 3 NA 0 0 0.75614 535 5 0.87312 211 5 0.95410 383 5 0.82292 58 5 1.00000 12 0 0.93282 179 5 0.84100 96 5 0.92593 69 5 0.95911 243 5 0.96333 53 5 1.00000 32 3 0.87665 145 5 0.95593 230 5 0.77565 269 5 0.92501 343 5 0.774866 170 5 0.453571 116 5 0.9555556 202 5 0.600000 12 0 0.769532 214 5 0.889066 299 5 0.92879 610 5 0.79141 425 5 0.89918 788 5 0.90431 376 5 0.91038 523 5 0.91771 0.85692 0.86320 0.90346 0.93981 0.88505 0.91851 0.91901 0.87195 0.97222 0.94105 0.98611 0.89268 0.87011 0.93122 1.00000 NA 0.90493 0.85875 0.94710 0.99132 0.97897 0.93892 0.87600 0.92079 0.95935 0.96435 1.00000 0.87700 0.94999 0.92623 0.92079 0.752248 0.405919 0.9465021 0.620370 0.77316 0.888197 0.92345 0.94759 0.88730 0.90210 0.89984 3 0.91822 0.93287 -0.0151770 5 0.84452 0.77876 0.06576707 0.85140 0.01811993 weaklyHypometh 1 1.00000 insignificant 0.98311 0.0261028 weaklyHypometh 1 1 insignificant -0.0096374 0.698140 lowCoverage 1 lowCoverage 0.91868 0.80059 0.109636 5 0.91343 0.79424 0.119187 2.4828e-06 1.000000 weaklyHypermeth 8.2760e-05 1 weaklyHypermeth 5.3157e-04 0.999928 weaklyHypermeth 2.0445e-02 1 weaklyHypermeth 0.1647939 8.1976e-02 lowCoverage 1.00000000 lowCoverage 0.91822 0.92946 -9.6008e-03 5 0.84452 0.76461 0.079912 3.5969e-01 0.308257 insignificant 1.0000e+00 1 insignificant 3.6203e-01 0.768214 insignificant 1.0000e+00 1 insignificant 0.0184123 0.529760 lowCoverage 1.00000 lowCoverage 0.93341 0.80059 0.1219388 5 0.93451 0.79424 0.1402669 3.4271e-05 0.99999 weaklyHypermeth 9.7918e-04 1 weaklyHypermeth 8.8821e-05 0.999991 weaklyHypermeth 4.9345e-03 1 weaklyHypermeth 0.1744312 7.0080e-02 lowCoverage 1.00000000 lowCoverage 0.93287 0.92946 0.00630836 5 0.77876 0.76461 0.0141452 9.9161e-02 0.9333915 insignificant 1.0000e+00 1.00000 insignificant 2.1615e-02 0.994156 weaklyHypermeth 9.0155e-01 1 insignificant 0.02804962 0.3998605 lowCoverage 1.00000 lowCoverage 0.80059 0.92981 -0.1199497 5 0.79424 0.91753 -0.1232926 0.999798 9.6649e-03 weaklyHypometh 1 2.3012e-01 insignificant 0.9990070 4.1186e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.146382 1.1560e-01 lowCoverage 1.000000 lowCoverage chr2 23410653 23411653 15571 ENSG00000210863 0.89724 109 4 0.81211 470 5 0.89124 152 5 0.95824 83 3 0.87358 108 5 0.86882 170 5 0.90544 163 5 0.87080 151 5 0.80937 140 4 0.94690 120 5 0.85478 283 5 0.65717 125 3 0.93295 195 5 0.95556 34 2 0.86325 127 4 0.84833 102 3 0.88435 91 3 0.85694 85 4 0.83077 247 4 0.83727 150 4 0.87846 82 5 0.86051 39 3 0.95090 148 5 0.88900 108 5 0.87500 8 0 0.93521 360 5 0.82349 75 5 0.93093 89 4 0.86014 282 5 0.97180 328 5 0.91131 364 5 0.88533 232 5 0.393946 229 5 0.334562 167 5 0.2836601 175 5 0.666667 4 0 0.668268 176 5 0.600289 328 5 0.81360 130 5 0.80036 147 5 0.81620 82 4 0.93414 50 3 0.72583 74 4 0.86936 0.78007 0.87735 0.89843 0.84577 0.81736 0.88704 0.90156 0.88876 0.89971 0.86027 0.76617 0.91342 0.93535 0.87723 0.88823 0.83511 0.90599 0.91402 0.94102 0.89582 0.92026 0.94306 0.85221 0.95421 0.93640 0.78776 0.90038 0.90628 0.95459 0.94370 0.90811 0.463958 0.181576 0.3589384 0.832982 0.63635 0.758889 0.91496 0.87884 0.90263 0.91269 0.62905 2 0.86892 0.91489 -0.0502189 5 0.86872 0.91388 -0.04516131 0.99506 0.00078362 weaklyHypometh 1 0.78362 insignificant 0.90847 0.0322257 weaklyHypometh 1 1 insignificant -0.0299174 0.132581 lowCoverage 1 lowCoverage 0.86892 0.49120 0.382045 5 0.86872 0.49301 0.375704 1.2544e-20 1.000000 hypermethylated 9.6492e-19 1 hypermethylated 1.2155e-06 1.000000 hypermethylated 8.6821e-05 1 hypermethylated 0.3765228 2.7173e-03 lowCoverage 0.15095909 lowCoverage 0.86892 0.82402 3.2392e-02 5 0.86872 0.76999 0.098730 7.5362e-04 0.736054 weaklyHypermeth 3.4256e-02 1 weaklyHypermeth 3.6514e-01 0.411463 insignificant 1.0000e+00 1 insignificant 0.0497282 0.225065 lowCoverage 1.00000 lowCoverage 0.91489 0.49120 0.4288208 5 0.91388 0.49301 0.4208652 5.6718e-16 1.00000 hypermethylated 4.7265e-14 1 hypermethylated 3.5450e-07 1.000000 hypermethylated 4.4313e-05 1 hypermethylated 0.4064402 1.9984e-03 lowCoverage 0.11102091 lowCoverage 0.91489 0.82402 0.08652838 5 0.91388 0.76999 0.1438912 7.2657e-06 0.9747148 weaklyHypermeth 6.0547e-04 1.00000 weaklyHypermeth 1.0344e-01 0.895553 insignificant 1.0000e+00 1 insignificant 0.07964560 0.0741885 lowCoverage 1.00000 lowCoverage 0.49120 0.82402 -0.3651617 5 0.49301 0.76999 -0.2769740 0.828899 2.4075e-05 hypomethylated 1 2.0062e-03 hypomethylated 0.9947874 1.5715e-03 weaklyHypometh 1 1.2089e-01 insignificant -0.326795 4.1704e-03 lowCoverage 0.189566 lowCoverage chr2 23426473 23427473 15577 ENSG00000210863 0.89715 323 7 0.90460 403 8 0.91775 174 8 0.95340 334 7 0.91333 144 8 0.92909 359 7 0.87766 178 8 0.94917 274 8 0.91692 194 8 0.94727 183 8 0.93960 407 8 0.85526 83 4 0.83879 272 8 0.91558 73 5 0.92877 220 8 0.94226 53 6 0.96627 46 4 0.84141 461 7 0.95055 240 8 0.93070 262 7 0.88979 91 6 0.56719 100 7 0.93333 200 8 0.90825 137 6 0.81037 61 5 0.91466 386 8 0.76979 109 6 0.93167 117 6 0.87081 387 7 0.96140 438 8 0.96198 403 8 0.95091 350 8 0.834631 308 8 0.908264 213 8 0.7401389 381 6 0.690476 34 4 0.790407 247 8 0.829140 350 8 0.55381 340 7 0.85839 305 7 0.87688 281 7 0.80555 289 7 0.76014 268 8 0.87653 0.90672 0.91293 0.95305 0.90669 0.97863 0.88167 0.93725 0.93014 0.92987 0.94442 0.86833 0.78173 0.91537 0.92763 0.94410 0.96146 0.78892 0.95096 0.90885 0.91933 0.59642 0.91025 0.91048 0.92455 0.92633 0.86256 0.88647 0.82707 0.96256 0.95426 0.94492 0.785017 0.874268 0.6853710 0.577609 0.71608 0.890188 0.58460 0.83297 0.83352 0.80030 0.67033 4 0.91886 0.91040 0.0028938 8 0.91857 0.91239 0.00617778 0.34030 0.37328107 insignificant 1 1.00000 insignificant 0.45485 0.1626871 insignificant 1 1 insignificant 0.0432636 0.221766 insignificant 1 insignificant 0.91886 0.74560 0.128556 8 0.91857 0.80108 0.117491 4.2022e-10 0.995282 weaklyHypermeth 1.8270e-08 1 weaklyHypermeth 7.4164e-05 0.996547 weaklyHypermeth 3.9034e-03 1 weaklyHypermeth 0.1169332 1.2216e-02 weaklyHypermeth 0.45242659 insignificant 0.91886 0.74107 1.7624e-01 7 0.91857 0.77870 0.139871 9.1814e-15 0.992840 weaklyHypermeth 3.0581e-12 1 weaklyHypermeth 7.0088e-08 0.991853 weaklyHypermeth 1.4879e-05 1 weaklyHypermeth 0.1448220 0.066407 insignificant 1.00000 insignificant 0.91040 0.74560 0.1312913 8 0.91239 0.80108 0.1113137 1.8260e-05 0.99981 weaklyHypermeth 5.3705e-04 1 weaklyHypermeth 1.4433e-03 0.997659 weaklyHypermeth 4.6559e-02 1 weaklyHypermeth 0.0736696 1.2522e-01 insignificant 1.00000000 insignificant 0.91040 0.74107 0.17630838 7 0.91239 0.77870 0.1336932 6.9575e-08 0.9975935 weaklyHypermeth 6.3250e-06 1.00000 weaklyHypermeth 9.2783e-06 0.994785 weaklyHypermeth 1.5464e-03 1 weaklyHypermeth 0.10155842 0.1728576 insignificant 1.00000 insignificant 0.74560 0.74107 0.0599868 7 0.80108 0.77870 0.0223795 0.027197 3.2577e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0787222 5.8826e-01 insignificant 1 1.0000e+00 insignificant 0.027889 6.8650e-01 insignificant 1.000000 insignificant chr2 23510548 23511548 15590 ENSG00000214836 0.83753 203 5 0.71699 68 5 0.81494 75 5 0.84291 144 5 0.71964 48 5 0.77455 163 5 0.86622 94 5 0.91571 65 4 0.80909 66 5 0.71978 63 5 0.82940 145 5 0.61230 45 5 0.77515 80 5 1.00000 6 1 0.78103 80 5 0.73394 57 5 0.76178 57 5 0.82221 135 4 0.79026 86 5 0.81070 213 5 0.70000 27 2 0.88215 69 5 0.71548 152 5 0.90185 56 5 0.73651 51 4 0.70583 112 5 0.89291 78 5 0.70000 17 2 0.67346 77 5 0.79482 109 5 0.82193 100 5 0.76758 202 5 0.765751 80 5 0.589740 102 5 0.6591510 108 5 0.704444 48 5 0.716628 58 4 0.751308 87 5 0.86215 243 5 0.83777 208 5 0.82821 146 4 0.86164 130 5 0.80739 168 5 0.84401 0.71348 0.82929 0.84663 0.73681 0.78914 0.86259 0.90623 0.78939 0.74770 0.84040 0.62037 0.78230 NA 0.81009 0.72996 0.79035 0.84025 0.80553 0.83091 0.76157 0.89467 0.74223 0.90134 0.73633 0.71370 0.89424 0.70000 0.70447 0.80894 0.84123 0.77250 0.770645 0.631668 0.6945220 0.683457 0.72228 0.761963 0.87267 0.84686 0.83035 0.85650 0.82461 3 0.81933 0.80667 0.0244773 5 0.79940 0.77042 0.02898030 0.13765 0.96916440 insignificant 1 1.00000 insignificant 0.63310 0.7967715 insignificant 1 1 insignificant 0.0223308 0.464524 lowCoverage 1 lowCoverage 0.81933 0.72671 0.096389 5 0.79940 0.70120 0.098202 1.3729e-05 0.999979 weaklyHypermeth 3.5202e-04 1 weaklyHypermeth 1.6863e-03 0.996365 weaklyHypermeth 5.2697e-02 1 weaklyHypermeth 0.0988695 1.1396e-02 lowCoverage 0.43829188 lowCoverage 0.81933 0.83128 -3.5888e-02 5 0.79940 0.84007 -0.040667 9.9278e-01 0.050045 insignificant 1.0000e+00 1 insignificant 9.9865e-01 0.033217 weaklyHypometh 1.0000e+00 1 insignificant -0.0427257 0.053171 lowCoverage 1.00000 lowCoverage 0.80667 0.72671 0.0715815 5 0.77042 0.70120 0.0692221 2.9304e-03 0.99798 weaklyHypermeth 5.1410e-02 1 weaklyHypermeth 9.6825e-03 0.988253 weaklyHypermeth 2.4206e-01 1 insignificant 0.0765388 5.2007e-02 lowCoverage 1.00000000 lowCoverage 0.80667 0.83128 -0.06111133 5 0.77042 0.84007 -0.0696476 9.9960e-01 0.0026853 weaklyHypometh 1.0000e+00 0.67132 insignificant 9.9638e-01 0.054207 insignificant 1.0000e+00 1 insignificant -0.06505642 0.0255686 lowCoverage 1.00000 lowCoverage 0.72671 0.83128 -0.1332839 5 0.70120 0.84007 -0.1388696 1.000000 7.9298e-07 weaklyHypometh 1 8.8109e-05 weaklyHypometh 0.9999998 8.0828e-06 weaklyHypometh 1 1.2277e-03 weaklyHypometh -0.141595 2.0241e-03 lowCoverage 0.112450 lowCoverage chr2 23576791 23577791 15602 ENSG00000214836 0.92714 263 6 0.94012 165 5 0.82231 147 6 0.92968 285 6 0.92505 120 6 0.91023 436 5 0.82418 140 6 0.87544 129 5 0.81451 169 6 0.93922 180 6 0.82336 173 5 0.85918 89 6 0.97087 141 6 0.94359 95 5 0.94874 117 4 0.92361 53 5 0.82500 38 1 0.96452 324 6 0.82109 139 5 0.86345 352 6 0.81593 53 3 0.89764 94 5 0.95307 199 6 0.97507 81 4 0.85738 59 4 0.90463 208 6 0.86298 130 6 0.84606 139 8 0.89840 177 6 0.94600 237 6 0.81894 247 6 0.91834 371 6 0.903263 220 6 0.953348 116 5 1.0000000 63 2 0.511111 17 1 0.984454 155 6 0.956863 236 6 0.93798 261 6 0.95529 204 5 0.98687 199 5 0.93362 244 5 0.79940 248 6 0.92256 0.89220 0.79475 0.88847 0.90249 0.87508 0.85820 0.86350 0.82957 0.86269 0.94677 0.87798 0.92849 0.86341 0.90459 0.89919 0.83977 0.94919 0.86555 0.89527 0.96178 0.93858 0.89374 0.93326 0.87494 0.89113 0.86206 0.87064 0.84461 0.92699 0.94281 0.93155 0.853980 0.862931 0.9969355 0.634911 0.96267 0.924425 0.91265 0.96805 0.97462 0.93852 0.91262 3 0.90098 0.91328 -0.0122255 6 0.69870 0.80786 -0.10916033 0.98567 0.76438438 insignificant 1 1.00000 insignificant 0.81711 0.6234161 insignificant 1 1 insignificant 0.0013598 0.944963 insignificant 1 insignificant 0.90169 0.92565 -0.018449 6 0.85529 0.94774 -0.092454 9.7364e-01 0.081263 insignificant 1.0000e+00 1 insignificant 9.9746e-01 0.073743 insignificant 1.0000e+00 1 insignificant 0.0077242 9.2377e-01 lowCoverage 1.00000000 lowCoverage 0.90169 0.94118 -4.4181e-02 6 0.85529 0.81090 0.044392 9.8971e-01 0.013496 weaklyHypometh 1.0000e+00 1 insignificant 9.8558e-01 0.016041 weaklyHypometh 1.0000e+00 1 insignificant -0.0300677 0.421708 insignificant 1.00000 insignificant 0.91339 0.92565 -0.0081343 6 0.86838 0.94774 -0.0793683 9.3012e-01 0.10552 insignificant 1.0000e+00 1 insignificant 9.8246e-01 0.053839 insignificant 1.0000e+00 1 insignificant 0.0063645 9.3745e-01 lowCoverage 1.00000000 lowCoverage 0.91456 0.94118 -0.03062762 6 0.78901 0.81090 -0.0218867 9.9560e-01 0.0836847 insignificant 1.0000e+00 1.00000 insignificant 9.9957e-01 0.122043 insignificant 1.0000e+00 1 insignificant -0.03142751 0.4113604 insignificant 1.00000 insignificant 0.92556 0.94199 -0.0246265 6 0.93903 0.94605 -0.0070123 0.720069 3.6495e-01 insignificant 1 1.0000e+00 insignificant 0.6854499 6.9350e-01 insignificant 1 1.0000e+00 insignificant -0.037792 6.6140e-01 lowCoverage 1.000000 lowCoverage chr2 23707259 23708259 15621 ENSG00000214836 0.98112 215 4 0.95157 173 6 0.94432 95 6 0.81951 177 4 0.93275 73 5 0.96566 259 6 0.94674 96 6 0.94031 90 4 0.94645 86 4 0.97569 66 2 0.95668 237 6 0.98462 32 4 0.97531 92 4 0.92857 42 2 0.96827 101 4 1.00000 16 1 0.66667 6 0 0.96940 394 2 0.91092 181 2 0.89233 230 4 1.00000 69 4 0.66840 94 4 0.93051 135 6 0.95023 53 4 0.98687 285 4 0.97653 212 6 0.98272 52 2 0.90278 49 3 0.99218 145 4 0.94410 241 6 0.96476 232 6 0.96851 285 4 0.889742 191 6 0.922840 125 4 1.0000000 77 4 0.879293 153 4 0.973909 143 6 0.972070 200 6 0.71567 135 4 0.60878 131 4 0.85470 136 2 0.97455 234 4 0.90533 156 6 0.95088 0.97979 0.87712 0.95838 0.94510 0.92518 0.95860 0.86359 0.91594 0.93739 0.96994 0.95919 0.96794 0.92622 0.91770 0.99930 0.92711 0.91163 0.95514 0.96320 1.00000 0.68512 0.88164 0.90162 0.96538 0.96018 0.95667 0.87858 0.98066 0.97066 0.97004 0.93029 0.709280 0.758562 1.0000000 0.777142 0.92663 0.954681 0.66790 0.57609 0.89984 0.92369 0.83033 2 0.94396 0.94168 0.0026131 4 0.94927 0.94984 -0.00057638 0.53262 0.69708990 lowCoverage 1 1.00000 lowCoverage 0.68520 0.3711774 lowCoverage 1 1 lowCoverage -0.0061214 0.844117 lowCoverage 1 lowCoverage 0.94396 0.87177 0.077374 4 0.94927 0.93232 0.016947 2.2745e-02 0.235752 lowCoverage 3.2964e-01 1 lowCoverage 5.5336e-01 0.126216 lowCoverage 1.0000e+00 1 lowCoverage -0.0067978 7.9910e-01 lowCoverage 1.00000000 lowCoverage 0.94407 0.81061 1.3191e-01 4 0.95651 0.72551 0.230998 5.3232e-06 0.999982 lowCoverage 3.8023e-04 1 lowCoverage 1.7615e-03 0.999799 lowCoverage 1.1484e-01 1 lowCoverage 0.1210380 0.142386 lowCoverage 1.00000 lowCoverage 0.94168 0.87177 0.0728251 6 0.94984 0.93232 0.0175231 2.2751e-01 0.34921 insignificant 1.0000e+00 1 insignificant 7.5222e-01 0.184465 insignificant 1.0000e+00 1 insignificant -0.0006764 9.8384e-01 lowCoverage 1.00000000 lowCoverage 0.94168 0.81163 0.13038015 4 0.94984 0.84643 0.1034079 7.4643e-04 0.9988230 lowCoverage 3.5544e-02 1.00000 lowCoverage 7.8102e-03 0.994927 lowCoverage 4.1106e-01 1 lowCoverage 0.12715939 0.1304279 lowCoverage 1.00000 lowCoverage 0.87177 0.81163 0.0495424 4 0.93232 0.84643 0.0858848 0.028538 9.8342e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0043031 9.9770e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.127836 1.2695e-01 lowCoverage 1.000000 lowCoverage chr2 23767314 23768314 15632 KLHL29 ENSG00000119771 0.91588 914 11 0.84390 408 9 0.83216 189 9 0.95046 543 11 0.86842 97 7 0.93229 643 11 0.84897 134 9 0.90426 275 9 0.93161 176 9 0.92428 180 9 0.93475 472 9 0.91948 91 6 0.94315 267 9 0.97189 126 6 0.95109 196 9 0.88867 74 6 0.82853 38 3 0.95204 962 9 0.95151 515 9 0.93581 655 11 0.92600 164 9 0.92223 157 9 0.92283 320 9 0.84190 116 9 0.77439 87 9 0.92135 497 9 0.87201 339 9 0.97661 78 8 0.92353 480 9 0.97725 372 9 0.80056 491 9 0.91730 592 11 0.803573 319 9 0.948512 439 9 0.8333333 232 6 0.867639 94 5 0.823930 156 9 0.708164 561 9 0.95831 509 11 0.89731 778 11 0.86076 741 11 0.87138 903 9 0.89966 640 11 0.91396 0.77626 0.82774 0.93417 0.79454 0.91623 0.84396 0.89745 0.90907 0.87733 0.91896 0.90495 0.92643 0.90001 0.93523 0.86406 0.86508 0.91883 0.93421 0.91515 0.87506 0.89700 0.91106 0.90696 0.93458 0.94050 0.85523 0.95391 0.91273 0.96413 0.91412 0.92363 0.778545 0.950342 0.8803202 0.886564 0.84051 0.865378 0.94556 0.92064 0.93962 0.85731 0.94434 6 0.92314 0.92778 -0.0063443 9 0.94257 0.72485 0.21771675 0.32428 0.77616287 insignificant 1 1.00000 insignificant 0.67592 0.3649650 insignificant 1 1 insignificant 0.0134600 0.527592 insignificant 1 insignificant 0.92307 0.88870 0.037476 9 0.93374 0.80418 0.129556 9.9882e-04 0.964658 weaklyHypermeth 1.8497e-02 1 weaklyHypermeth 4.2214e-02 0.887645 weaklyHypermeth 7.5858e-01 1 insignificant 0.0805981 5.3847e-02 insignificant 1.00000000 insignificant 0.92309 0.92953 -7.2270e-03 9 0.93374 0.85348 0.080251 1.6809e-01 0.690076 insignificant 1.0000e+00 1 insignificant 1.4814e-01 0.532911 insignificant 1.0000e+00 1 insignificant 0.0139715 0.499284 insignificant 1.00000 insignificant 0.92815 0.88827 0.0422872 9 0.84152 0.76362 0.0778988 2.6533e-02 0.83788 weaklyHypermeth 3.9601e-01 1 insignificant 6.0764e-02 0.959960 insignificant 9.6746e-01 1 insignificant 0.0671381 1.0582e-01 insignificant 1.00000000 insignificant 0.92818 0.92967 -0.00010626 9 0.86017 0.88796 -0.0277932 8.5621e-01 0.7374309 insignificant 1.0000e+00 1.00000 insignificant 5.9951e-01 0.968550 insignificant 1.0000e+00 1 insignificant 0.00051152 0.9839919 insignificant 1.00000 insignificant 0.88815 0.92931 -0.0403994 9 0.71918 0.87302 -0.1538421 0.995631 6.1687e-01 insignificant 1 1.0000e+00 insignificant 0.9941542 6.5802e-01 insignificant 1 1.0000e+00 insignificant -0.066627 1.0700e-01 insignificant 1.000000 insignificant chr2 25404565 25405565 15682 MIR1301 ENSG00000221445 0.79623 156 7 0.79958 176 7 0.96672 159 7 0.94206 189 7 0.79022 93 7 0.73926 266 7 0.87789 200 7 0.83041 164 7 0.78750 94 7 0.98611 106 7 0.93799 222 7 0.76833 82 7 0.69993 91 3 0.89057 83 3 0.95215 145 7 0.92838 102 7 0.67841 436 4 0.92407 181 7 0.92154 190 7 0.83539 177 7 0.88279 67 7 0.70806 246 7 0.81790 127 7 0.87719 102 7 0.94509 322 5 0.90359 212 7 0.71781 109 7 0.75289 88 4 0.93876 177 7 0.93322 164 7 0.72360 212 7 0.84885 195 7 0.671036 133 7 0.649968 77 5 0.5000000 36 1 0.902554 135 5 0.581233 118 4 0.792327 164 7 0.84665 187 7 0.92788 191 7 0.91709 167 7 0.83197 108 7 0.91641 117 7 0.90903 0.89017 0.92319 0.93464 0.83015 0.89883 0.85290 0.91167 0.87979 0.95723 0.94534 0.85058 0.90405 0.89585 0.91975 0.84746 0.92531 0.90151 0.87688 0.90902 0.89769 0.79847 0.94871 0.95948 0.94432 0.90011 0.89707 0.88179 0.91828 0.93032 0.93417 0.95693 0.609508 0.631068 0.7229359 0.870183 0.52387 0.895718 0.81444 0.91971 0.88627 0.78057 0.89783 1 0.89090 0.90476 -0.0137192 7 0.70186 0.65316 0.04870723 0.13613 0.20039718 insignificant 1 1.00000 insignificant 0.23964 0.6549173 insignificant 1 1 insignificant 0.0151579 0.653892 insignificant 1 insignificant 0.89246 0.72466 0.167954 7 0.75207 0.68806 0.064012 8.0903e-12 0.999957 weaklyHypermeth 4.2580e-10 1 weaklyHypermeth 7.3539e-04 0.995783 weaklyHypermeth 2.7237e-02 1 weaklyHypermeth 0.1697849 3.3776e-02 lowCoverage 0.86604508 lowCoverage 0.89144 0.86606 2.4012e-02 7 0.77985 0.90400 -0.124156 1.6612e-02 0.174229 weaklyHypermeth 5.1913e-01 1 insignificant 1.7651e-02 0.353769 weaklyHypermeth 7.8669e-01 1 insignificant -0.0353648 0.240755 insignificant 1.00000 insignificant 0.90611 0.72356 0.1822182 7 0.65316 0.61925 0.0339033 4.9875e-07 0.99997 weaklyHypermeth 2.2670e-05 1 weaklyHypermeth 4.8175e-03 0.995890 weaklyHypermeth 1.3382e-01 1 insignificant 0.1546270 4.8217e-02 lowCoverage 1.00000000 lowCoverage 0.90566 0.86606 0.04002543 7 0.72573 0.90400 -0.1782749 6.4101e-02 0.8455808 insignificant 1.0000e+00 1.00000 insignificant 7.9136e-02 0.448879 insignificant 1.0000e+00 1 insignificant -0.05052273 0.1482167 insignificant 1.00000 insignificant 0.72424 0.86571 -0.1426830 7 0.64907 0.89201 -0.2429384 0.997729 3.0835e-03 weaklyHypometh 1 9.9469e-02 weaklyHypometh 0.9985459 3.0001e-02 weaklyHypometh 1 9.6133e-01 insignificant -0.205150 1.6359e-02 lowCoverage 0.584244 lowCoverage chr2 26263702 26264702 15700 FAM59B ENSG00000157833 0.57637 241 4 0.69023 293 8 0.79970 251 8 0.78518 222 4 0.85908 260 8 0.91140 249 8 0.81975 295 8 0.86291 252 8 0.74021 182 8 0.72825 225 8 0.88334 364 8 0.84944 133 5 0.71512 189 6 0.82959 160 5 0.81282 274 8 0.92605 101 3 0.45533 43 3 0.88843 285 4 0.63361 428 5 0.94508 230 8 0.73562 151 8 0.85056 99 5 0.86280 244 8 0.93686 128 6 0.88802 85 4 0.94667 332 8 0.87584 301 8 0.78285 110 8 0.74152 419 8 0.89040 360 8 0.90948 355 8 0.94254 225 8 0.815834 170 8 0.499157 158 5 0.8333333 117 3 0.871429 40 4 0.710453 147 8 0.865923 288 5 0.91099 231 5 0.96316 260 5 0.90385 178 4 0.73033 233 4 0.54065 248 4 0.87354 0.81872 0.80764 0.84263 0.89438 0.91728 0.87920 0.85275 0.83768 0.90390 0.89672 0.77340 0.92751 0.91122 0.90594 0.97784 0.38041 0.86467 0.87309 0.91881 0.66816 0.77664 0.91218 0.98673 0.85473 0.94628 0.84337 0.89682 0.87626 0.90463 0.90488 0.85703 0.882660 0.725600 0.9758117 0.746058 0.82694 0.936841 0.91895 0.91654 0.84695 0.87923 0.85149 3 0.86615 0.87789 -0.0133412 8 0.84944 0.86789 -0.01844899 0.95722 0.02744137 weaklyHypometh 1 1.00000 insignificant 0.96898 0.0028498 weaklyHypometh 1 1 insignificant -0.0780019 0.034069 weaklyHypometh 1 insignificant 0.86601 0.85870 0.012803 5 0.83063 0.77323 0.057394 4.7976e-03 0.010531 weaklyHypermeth 7.8649e-02 1 weaklyHypermeth 3.6013e-01 0.023586 inconclusive 1.0000e+00 1 insignificant 0.0195733 7.7070e-01 insignificant 1.00000000 insignificant 0.86601 0.90957 -1.7462e-02 5 0.83063 0.87396 -0.043336 9.3783e-01 0.057714 insignificant 1.0000e+00 1 insignificant 9.2981e-01 0.200451 insignificant 1.0000e+00 1 insignificant -0.0242006 0.781509 lowCoverage 1.00000 lowCoverage 0.87799 0.85870 0.0220345 5 0.87221 0.77323 0.0989820 1.4988e-03 0.37699 weaklyHypermeth 2.7755e-02 1 weaklyHypermeth 1.7742e-02 0.449927 weaklyHypermeth 4.0323e-01 1 insignificant 0.0975752 1.6488e-01 insignificant 1.00000000 insignificant 0.87799 0.90957 -0.00825092 5 0.87221 0.87396 -0.0017478 8.4636e-01 0.5485782 insignificant 1.0000e+00 1.00000 insignificant 7.3379e-01 0.690381 insignificant 1.0000e+00 1 insignificant 0.05380127 0.5371681 lowCoverage 1.00000 lowCoverage 0.85870 0.90957 -0.0142613 5 0.77323 0.87396 -0.1007298 0.150634 2.6228e-01 insignificant 1 1.0000e+00 insignificant 0.4358907 6.9780e-01 insignificant 1 1.0000e+00 insignificant -0.043774 6.6528e-01 lowCoverage 1.000000 lowCoverage chr2 26786793 26787793 15711 KCNK3 ENSG00000171303 0.86500 160 6 0.69708 97 5 0.89683 73 5 0.87400 178 6 0.65251 49 3 0.89041 303 6 0.85684 94 4 0.93310 104 6 0.74078 77 5 0.70087 64 5 0.87709 201 6 0.96111 56 4 0.85094 169 6 0.92500 36 4 0.84701 99 5 0.82639 33 4 0.75000 8 0 0.80464 215 6 0.89765 70 5 0.90483 293 6 0.84822 76 6 0.80457 86 6 0.85938 140 6 0.88750 65 6 0.98889 66 4 0.85146 128 6 0.79678 87 6 0.74916 61 5 0.84952 74 6 0.90245 147 6 0.88148 97 6 0.90262 340 6 0.640463 127 6 0.679104 78 6 0.4166667 45 5 0.620000 15 1 0.629196 126 6 0.662418 134 6 0.77993 208 5 0.79175 239 6 0.78377 135 5 0.71471 145 5 0.67593 133 5 0.89452 0.79266 0.86512 0.85094 0.74881 0.89747 0.88214 0.96309 0.83358 0.72780 0.87929 0.95599 0.90054 0.91044 0.82993 0.89088 0.92717 0.84004 0.91363 0.92121 0.93200 0.74121 0.89413 0.93619 0.98453 0.83542 0.86368 0.81121 0.82425 0.90438 0.89331 0.91859 0.705023 0.771403 0.5248619 0.790656 0.66551 0.755953 0.77993 0.84522 0.86896 0.76585 0.75844 4 0.87222 0.87491 -0.0097183 6 0.85624 0.86877 -0.01252994 0.83271 0.40725572 insignificant 1 1.00000 insignificant 0.90247 0.3843104 insignificant 1 1 insignificant -0.0225667 0.395413 lowCoverage 1 lowCoverage 0.87222 0.59810 0.241446 6 0.85624 0.61711 0.239136 1.9072e-14 0.999998 hypermethylated 1.1920e-12 1 hypermethylated 3.4383e-05 0.945998 hypermethylated 2.0225e-03 1 hypermethylated 0.2296283 9.1880e-04 lowCoverage 0.06125328 lowCoverage 0.87222 0.81512 7.5396e-02 6 0.85624 0.76021 0.096038 4.0992e-05 0.999912 weaklyHypermeth 2.5620e-03 1 weaklyHypermeth 1.3936e-03 0.999799 weaklyHypermeth 9.9542e-02 1 weaklyHypermeth 0.0883875 0.013763 lowCoverage 0.62561 lowCoverage 0.87491 0.59810 0.2667098 6 0.86877 0.61711 0.2516655 5.2179e-11 1.00000 hypermethylated 3.2612e-09 1 hypermethylated 2.2263e-05 0.980337 hypermethylated 1.3914e-03 1 hypermethylated 0.2521950 5.9645e-04 hypermethylated 0.03727842 hypermethylated 0.87491 0.81512 0.08811691 6 0.86877 0.76021 0.1085677 3.2161e-04 0.9999726 weaklyHypermeth 1.6927e-02 1.00000 weaklyHypermeth 3.7293e-04 0.999942 weaklyHypermeth 2.8687e-02 1 weaklyHypermeth 0.11095423 0.0039964 weaklyHypermeth 0.37674 insignificant 0.59810 0.81512 -0.1488068 6 0.61711 0.76021 -0.1430978 0.996660 4.3829e-03 weaklyHypometh 1 1.2175e-01 insignificant 0.8118359 5.2282e-02 insignificant 1 1.0000e+00 insignificant -0.141241 1.4881e-02 weaklyHypometh 0.551147 insignificant chr2 27331754 27332754 15718 CAD ENSG00000084774 0.80181 176 4 0.63741 107 5 0.59614 81 5 0.77165 234 4 0.80238 52 5 0.85102 198 5 0.68485 88 5 0.62344 79 5 0.71914 89 5 0.84375 67 5 0.87441 164 5 0.58200 110 5 0.57784 121 5 NA 0 0 0.72606 68 3 0.53429 27 4 0.59571 74 5 0.70779 179 4 0.73208 66 5 0.73505 180 4 0.65360 68 5 0.52313 89 4 0.82646 184 5 0.86600 88 5 0.58810 70 4 0.80379 140 5 0.65988 113 5 0.89040 56 5 0.77751 58 3 0.64580 135 5 0.67965 130 5 0.88052 232 5 0.338696 88 5 0.126237 105 5 0.3333333 75 3 0.114471 80 4 0.306045 54 5 0.237592 150 5 0.57143 196 4 0.53489 222 5 0.29709 158 4 0.22095 211 4 0.63315 198 4 0.75635 0.67802 0.60711 0.73191 0.81145 0.84818 0.66354 0.53950 0.74700 0.85024 0.87599 0.46013 0.57655 NA 0.77369 0.63520 0.56072 0.67749 0.71554 0.70253 0.70814 0.42042 0.82257 0.81558 0.70424 0.81738 0.73108 0.87880 0.76648 0.69698 0.68059 0.87825 0.344810 0.076352 0.2701513 0.114224 0.26187 0.157109 0.51264 0.49054 0.34301 0.24272 0.59371 4 0.69769 0.74908 -0.0497475 5 0.75432 0.74305 0.01127179 0.97997 0.05422155 insignificant 1 1.00000 insignificant 0.97328 0.0919024 insignificant 1 1 insignificant -0.0278089 0.522176 lowCoverage 1 lowCoverage 0.69755 0.20833 0.493023 5 0.70519 0.22941 0.475783 1.8741e-25 1.000000 hypermethylated 2.3426e-23 1 hypermethylated 1.5574e-09 1.000000 hypermethylated 2.2249e-07 1 hypermethylated 0.4623659 6.8119e-06 lowCoverage 0.00075688 lowCoverage 0.69755 0.40508 2.5885e-01 4 0.70519 0.47612 0.229072 2.5510e-09 0.999902 lowCoverage 2.8345e-07 1 lowCoverage 1.5678e-06 0.999875 lowCoverage 2.6130e-04 1 lowCoverage 0.2535939 0.032371 lowCoverage 1.00000 lowCoverage 0.74926 0.20833 0.5447976 5 0.75833 0.22941 0.5289238 1.4404e-20 1.00000 hypermethylated 1.8005e-18 1 hypermethylated 4.0096e-08 1.000000 hypermethylated 5.7280e-06 1 hypermethylated 0.4901749 1.0636e-06 lowCoverage 0.00015194 lowCoverage 0.74926 0.40508 0.30927979 4 0.75833 0.47612 0.2822130 3.9504e-09 1.0000000 lowCoverage 4.3893e-07 1.00000 lowCoverage 3.2748e-07 1.000000 lowCoverage 1.0916e-04 1 lowCoverage 0.28140280 0.0209011 lowCoverage 1.00000 lowCoverage 0.20833 0.40508 -0.2532026 4 0.22941 0.47612 -0.2467109 0.999850 3.0248e-06 lowCoverage 1 3.0248e-04 lowCoverage 0.9744317 4.1725e-03 lowCoverage 1 2.6471e-01 lowCoverage -0.208772 6.1359e-02 lowCoverage 1.000000 lowCoverage chr2 30487765 30488765 15976 LBH ENSG00000213626 0.80191 1124 7 0.75067 1069 8 0.73073 694 8 0.76925 769 6 0.73198 682 8 0.80370 1298 8 0.73711 1259 8 0.74637 780 8 0.70166 872 8 0.80452 1039 8 0.81312 639 8 0.68241 662 6 0.76172 1110 7 0.84167 221 6 0.80586 1397 8 0.86186 642 6 0.81831 1394 8 0.78929 895 8 0.77978 684 8 0.85099 1053 8 0.78073 409 8 0.64155 467 7 0.79144 802 8 0.81168 593 7 0.75901 524 8 0.76302 890 8 0.69337 674 7 0.69580 374 7 0.82746 714 8 0.75897 1037 8 0.75291 828 8 0.78937 1877 8 0.661625 885 8 0.692069 897 8 0.7513312 543 8 0.809982 673 6 0.761689 409 8 0.715918 955 8 0.82761 1051 8 0.72181 1035 7 0.81202 1018 8 0.76932 875 8 0.74074 844 7 0.90034 0.86166 0.84212 0.88632 0.87799 0.88068 0.86435 0.88188 0.86151 0.91408 0.85132 0.84837 0.88972 0.91730 0.90718 0.86654 0.90158 0.88543 0.88792 0.89149 0.88881 0.87095 0.87175 0.90144 0.89955 0.86829 0.88591 0.92099 0.89318 0.88219 0.86268 0.88190 0.804650 0.800990 0.8555101 0.857309 0.86721 0.815430 0.91365 0.88723 0.90162 0.88933 0.91033 6 0.88558 0.88856 0.0011491 8 0.78389 0.77070 0.01319838 0.21759 0.89647972 insignificant 1 1.00000 insignificant 0.51501 0.6711088 insignificant 1 1 insignificant 0.0237027 0.225379 insignificant 1 insignificant 0.88558 0.82967 0.057505 8 0.78389 0.71905 0.064843 7.2637e-12 0.982762 weaklyHypermeth 4.0354e-10 1 weaklyHypermeth 8.8079e-07 0.938707 weaklyHypermeth 7.5053e-05 1 weaklyHypermeth 0.0470431 9.0218e-02 insignificant 1.00000000 insignificant 0.88558 0.91769 -1.7526e-02 8 0.78389 0.79567 -0.011773 7.3399e-01 0.086647 insignificant 1.0000e+00 1 insignificant 7.9583e-01 0.057968 insignificant 1.0000e+00 1 insignificant 0.0048443 0.839356 insignificant 1.00000 insignificant 0.88856 0.82967 0.0558462 8 0.77070 0.71905 0.0516447 8.4629e-09 0.98128 weaklyHypermeth 4.7016e-07 1 weaklyHypermeth 5.0613e-06 0.921218 weaklyHypermeth 3.8933e-04 1 weaklyHypermeth 0.0233403 4.0217e-01 insignificant 1.00000000 insignificant 0.88856 0.91769 -0.01816176 8 0.77070 0.79567 -0.0249715 9.3024e-01 0.0479488 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.2660e-01 0.116401 insignificant 1.0000e+00 1 insignificant -0.01885845 0.4784650 insignificant 1.00000 insignificant 0.82967 0.91769 -0.0740062 8 0.71905 0.79567 -0.0766162 0.999961 3.5305e-06 weaklyHypometh 1 3.2095e-04 weaklyHypometh 0.9988948 1.1414e-03 weaklyHypometh 1 9.5119e-02 weaklyHypometh -0.042199 1.8865e-01 insignificant 1.000000 insignificant chr2 30944003 30945003 15995 CAPN13 ENSG00000162949 0.88122 335 12 0.90703 95 7 0.74507 85 8 0.88057 281 11 0.85268 45 4 0.83447 317 12 0.92381 45 5 0.84815 77 7 0.91548 40 4 0.90551 75 4 0.75193 185 8 0.61875 42 2 0.71570 151 7 NA 0 0 0.88889 55 6 0.97778 21 2 0.74322 54 6 0.85281 347 11 0.87450 79 11 0.87745 257 12 1.00000 30 2 0.93981 87 10 0.81826 191 8 0.76515 50 5 0.86333 89 9 0.88059 210 11 0.90982 74 6 0.97500 22 2 0.89394 93 7 0.89993 204 12 0.74573 180 10 0.86065 367 12 0.774967 93 7 0.750537 118 11 0.8612982 227 12 0.940476 30 3 0.859375 25 1 0.871393 182 11 0.88786 292 11 0.90727 278 11 0.89359 356 11 0.87129 236 11 0.85097 361 11 0.90795 0.92019 0.74641 0.90044 0.88961 0.86612 0.92747 0.91538 0.93651 0.90927 0.88200 0.67727 0.86908 NA 0.92256 0.94918 0.85586 0.84987 0.90897 0.89240 1.00000 0.94164 0.93518 0.91835 0.93754 0.92680 0.92229 0.94747 0.93450 0.94541 0.79541 0.90336 0.798140 0.759023 0.9197634 0.934119 0.86364 0.936322 0.95670 0.92359 0.92226 0.95339 0.92020 1 0.86968 0.88416 -0.0259618 11 0.87306 0.80799 0.06507008 0.95820 0.11972445 insignificant 1 1.00000 insignificant 0.99895 0.0188964 weaklyHypometh 1 1 insignificant -0.0375087 0.220963 insignificant 1 insignificant 0.86963 0.84296 0.025431 11 0.86330 0.83768 0.025619 1.3804e-01 0.829234 insignificant 1.0000e+00 1 insignificant 3.6566e-01 0.877128 insignificant 1.0000e+00 1 insignificant -0.0011650 9.7392e-01 insignificant 1.00000000 insignificant 0.86958 0.90742 -3.5332e-02 11 0.85191 0.87991 -0.028005 9.8913e-01 0.026519 weaklyHypometh 1.0000e+00 1 insignificant 9.9129e-01 0.126840 insignificant 1.0000e+00 1 insignificant -0.0403543 0.085627 insignificant 1.00000 insignificant 0.88519 0.84296 0.0497171 11 0.84450 0.83768 0.0068254 1.2378e-03 0.95914 weaklyHypermeth 2.3355e-02 1 weaklyHypermeth 6.9547e-03 0.999637 weaklyHypermeth 1.8302e-01 1 insignificant 0.0363438 3.3307e-01 insignificant 1.00000000 insignificant 0.88568 0.90742 -0.00544638 11 0.87321 0.87991 -0.0066981 9.0990e-01 0.4756408 insignificant 1.0000e+00 1.00000 insignificant 2.3795e-01 0.994831 insignificant 1.0000e+00 1 insignificant -0.00284555 0.9076215 insignificant 1.00000 insignificant 0.84250 0.90742 -0.0580189 11 0.82415 0.87991 -0.0557589 0.998148 9.3940e-03 weaklyHypometh 1 2.2912e-01 insignificant 0.9652017 9.4941e-02 insignificant 1 1.0000e+00 insignificant -0.039189 2.3762e-01 insignificant 1.000000 insignificant chr2 36399464 36400464 16191 ENSG00000218238 0.832634 113 5 0.833333 34 1 0.666667 12 1 0.83690 133 5 0.714286 7 1 0.83805 145 5 0.928571 16 1 0.229167 18 1 0.909091 11 1 0.095238 19 1 0.856098 65 5 0.93333 10 1 0.78385 30 3 0.888889 9 1 0.785714 14 1 1.000000 4 0 0.80000 13 0 0.850080 109 5 0.8789916 62 5 0.82544 113 5 0.714286 7 1 0.785556 47 5 0.680000 63 5 0.500000 12 1 0.960000 28 4 0.657778 129 5 0.898551 33 1 0.760000 9 1 0.6555556 38 1 0.68587 100 5 0.60068 78 5 0.7707851 180 5 0.519048 36 1 0.51667 16 1 0.73744 120 5 0.700000 10 0 0.92500 20 1 0.77236 128 5 0.844689 73 5 0.914833 131 5 0.83155 90 5 0.85128 49 5 0.79346 87 5 0.684211 0.833333 0.66667 0.95000 0.714286 0.87097 0.785714 0.687500 0.90909 0.66667 0.7804878 0.66667 0.769231 0.888889 0.785714 1.00000 1.000000 0.736842 0.823529 0.95000 0.714286 0.777778 1.000000 0.500000 1.000000 0.766667 0.826087 0.800000 0.777778 0.842105 0.700000 0.972973 0.761905 0.583333 0.710526 0.500000 0.625000 0.9000000 0.761905 0.850000 0.86364 0.923077 0.833333 1 0.810032 0.759669 0.0458117 5 0.76534 0.553427 0.21191512 3.0325e-02 0.9926118 weaklyHypermeth 1.000000 1.0000 insignificant 0.3129162 0.97894808 insignificant 1.00000 1.00000 insignificant 0.0518948 0.405884 lowCoverage 1 lowCoverage 0.810032 0.69091 0.122232 5 0.76534 0.79103 -0.02569096 5.6925e-04 9.7887e-01 weaklyHypermeth 1.5385e-02 1.0000e+00 weaklyHypermeth 1.6810e-01 9.5987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.079232 3.4931e-01 lowCoverage 1.0000e+00 lowCoverage 0.810032 0.839535 -0.0303876 5 0.76534 0.89847 -0.1331274 9.9180e-01 2.8655e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.98610334 0.53108954 insignificant 1.000000 1.00000 insignificant -0.0728468 0.1877740 lowCoverage 1.00000 lowCoverage 0.759669 0.69091 0.077281 5 0.553427 0.79103 -0.237606 1.4474e-01 9.9416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3537e-01 8.9020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.027337 7.1957e-01 lowCoverage 1.0000e+00 lowCoverage 0.759669 0.839535 -0.0802766 5 0.553427 0.89847 -0.3450425 9.9997e-01 1.7201e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9995e-01 0.0815258 insignificant 1.0000000 1 insignificant -0.12474160 0.0083370 lowCoverage 0.86522 lowCoverage 0.69091 0.839535 -0.153242 5 0.79103 0.89847 -0.107436 1.0000e+00 2.7453e-03 weaklyHypometh 1.0000e+00 8.5791e-02 weaklyHypometh 0.99998307 1.1188e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1520785 6.4581e-02 lowCoverage 1.00000000 lowCoverage chr2 39218480 39219480 16311 ENSG00000202309 0.885141 191 4 0.694839 95 4 0.513690 76 4 0.75704 132 5 0.666667 33 3 0.86961 206 5 0.820330 74 4 0.839897 94 5 0.714503 77 4 0.820635 59 5 0.738196 162 5 0.73333 44 3 0.79067 92 5 1.000000 14 1 0.632299 89 4 0.762500 34 2 0.60748 47 3 0.708800 130 5 0.7960805 122 5 0.87832 186 5 0.730952 37 3 0.825614 50 4 0.803120 123 5 0.881818 40 3 0.689524 39 4 0.781680 145 5 0.694680 63 4 0.657179 44 3 0.7172037 78 5 0.78322 159 5 0.75772 152 5 0.7779481 255 5 0.646941 108 5 0.64619 82 5 0.72384 148 5 0.618009 32 3 0.72683 55 5 0.67548 147 5 0.810407 171 5 0.878489 194 5 0.89733 150 5 0.79496 181 5 0.72571 158 5 0.891363 0.734581 0.65129 0.86322 0.731559 0.90115 0.857994 0.851459 0.79464 0.89166 0.8202158 0.72781 0.822014 0.905207 0.746250 0.80436 0.713031 0.802429 0.858167 0.89701 0.802339 0.808710 0.841665 0.898063 0.829079 0.849137 0.810359 0.755280 0.767942 0.851720 0.807201 0.837716 0.752467 0.672020 0.804046 0.747934 0.836146 0.7677131 0.871086 0.906745 0.90677 0.838591 0.828410 3 0.809913 0.810970 0.0053623 5 0.78466 0.770354 0.01430517 5.4888e-01 0.8029749 insignificant 1.000000 1.0000 insignificant 0.5035778 0.85779067 insignificant 1.00000 1.00000 insignificant 0.0031141 0.920438 lowCoverage 1 lowCoverage 0.809913 0.72727 0.074780 5 0.78466 0.68594 0.09871698 3.4361e-03 9.9982e-01 weaklyHypermeth 8.5904e-02 1.0000e+00 weaklyHypermeth 2.9971e-02 9.9602e-01 weaklyHypermeth 7.9656e-01 1.0000e+00 insignificant 0.088622 8.8403e-03 lowCoverage 3.5361e-01 lowCoverage 0.809913 0.832553 -0.0332569 5 0.78466 0.81486 -0.0302014 9.6178e-01 2.2589e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.97167323 0.17137543 insignificant 1.000000 1.00000 insignificant -0.0598782 0.1612778 lowCoverage 1.00000 lowCoverage 0.810970 0.72727 0.069539 5 0.770354 0.68594 0.084412 4.3375e-03 9.9993e-01 weaklyHypermeth 1.0844e-01 1.0000e+00 insignificant 4.1450e-02 9.9474e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.085508 5.2673e-03 lowCoverage 2.1947e-01 lowCoverage 0.810970 0.832553 -0.0383772 5 0.770354 0.81486 -0.0445065 9.8876e-01 7.2477e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.9212e-01 0.0488354 weaklyHypometh 1.0000000 1 insignificant -0.06299224 0.1225658 lowCoverage 1.00000 lowCoverage 0.72727 0.832553 -0.110086 5 0.68594 0.81486 -0.128918 9.9998e-01 7.5781e-04 weaklyHypometh 1.0000e+00 2.8067e-02 weaklyHypometh 0.99994814 2.6064e-03 weaklyHypometh 1.00000 1.2412e-01 insignificant -0.1484998 4.8433e-03 lowCoverage 0.25491177 lowCoverage chr2 42178866 42179866 16450 PKDCC ENSG00000162878 0.739471 115 5 0.698721 198 5 0.573810 43 5 0.79041 64 5 0.683442 48 5 0.80092 202 5 0.724402 70 5 0.617533 113 5 0.766275 47 5 0.870160 65 5 0.766757 266 5 0.40000 10 0 0.74918 93 5 0.781169 44 5 0.905000 67 5 0.200000 5 0 NA 0 0 0.722666 140 4 0.7567996 225 5 0.79478 202 5 0.833333 43 5 NA 0 0 0.868929 108 5 0.600000 46 5 1.000000 6 0 0.813757 296 5 0.776882 95 5 1.000000 13 2 0.7688396 179 5 0.79210 241 5 0.76562 320 5 0.8275207 209 5 0.090754 210 5 0.07013 194 5 0.18477 487 5 0.000000 1 0 0.16398 201 5 0.15696 365 5 0.672692 142 5 0.726638 191 5 0.51295 87 5 0.56168 97 5 0.59673 102 5 0.739471 0.698721 0.57381 0.79041 0.683442 0.80092 0.724402 0.617533 0.76627 0.87016 0.7667567 0.40000 0.749178 0.781169 0.905000 0.20000 NA 0.722666 0.756800 0.79478 0.833333 NA 0.868929 0.600000 0.958357 0.813757 0.776882 1.000000 0.768840 0.792099 0.765619 0.827521 0.090754 0.070130 0.184771 NA 0.163978 0.1569616 0.672692 0.726638 0.51295 0.561681 0.596726 0 0.767476 0.812339 -0.0484377 5 0.74872 0.796112 -0.04738978 9.9810e-01 0.0181425 weaklyHypometh 1.000000 1.0000 insignificant 0.9999761 0.00042301 weaklyHypometh 1.00000 0.42301 insignificant -0.1202687 0.024391 lowCoverage 1 lowCoverage 0.767476 0.14678 0.617054 5 0.74872 0.14708 0.60164581 1.8596e-42 1.0000e+00 hypermethylated 9.2978e-40 1.0000e+00 hypermethylated 1.1778e-10 1.0000e+00 hypermethylated 5.8892e-08 1.0000e+00 hypermethylated 0.591085 5.5743e-11 lowCoverage 1.3936e-08 lowCoverage 0.767476 0.691438 0.0907628 5 0.74872 0.63614 0.1125805 1.1060e-04 9.7134e-01 weaklyHypermeth 8.5075e-03 1.0000000 weaklyHypermeth 0.00849652 0.96716980 weaklyHypermeth 0.606895 1.00000 insignificant 0.0880472 0.1256165 lowCoverage 1.00000 lowCoverage 0.812339 0.14678 0.661222 5 0.796112 0.14708 0.649036 1.4617e-37 1.0000e+00 hypermethylated 7.3086e-35 1.0000e+00 hypermethylated 1.4131e-10 1.0000e+00 hypermethylated 7.0655e-08 1.0000e+00 hypermethylated 0.711354 1.2125e-10 lowCoverage 6.0623e-08 lowCoverage 0.812339 0.691438 0.1349761 5 0.796112 0.63614 0.1599703 7.5938e-08 9.9999e-01 weaklyHypermeth 2.1674e-05 1.0000000 weaklyHypermeth 1.7248e-05 0.9999965 weaklyHypermeth 0.0043121 1 weaklyHypermeth 0.20831590 0.0021347 lowCoverage 0.30693 lowCoverage 0.14678 0.691438 -0.538941 5 0.14708 0.63614 -0.489065 1.0000e+00 1.2141e-19 hypomethylated 1.0000e+00 4.0470e-17 hypomethylated 1.00000000 2.8936e-07 hypomethylated 1.00000 1.4468e-04 hypomethylated -0.5030377 7.1652e-06 lowCoverage 0.00143304 lowCoverage chr2 42221618 42222618 16460 PKDCC ENSG00000162878 0.306428 189 6 0.264491 325 6 0.231512 362 6 0.42652 172 4 0.181591 207 5 0.39043 344 5 0.187601 159 5 0.252361 261 4 0.126282 219 5 0.263605 263 5 0.450262 177 5 0.23568 166 4 0.11251 210 4 0.124403 126 4 0.215338 387 5 0.214296 210 4 0.11111 16 0 0.315860 204 4 0.2769338 242 5 0.29500 196 5 0.104186 115 5 0.192896 143 5 0.370388 217 6 0.233791 189 7 0.158159 98 5 0.333040 320 6 0.143056 420 5 0.085655 115 5 0.2997275 202 4 0.31010 346 6 0.25579 296 6 0.2021628 290 6 0.130392 276 6 0.10952 82 4 0.28515 161 6 0.200000 22 3 0.21925 110 5 0.27272 234 6 0.181211 194 4 0.235774 186 5 0.21250 164 4 0.26205 156 4 0.18169 146 5 0.165483 0.145818 0.14566 0.17524 0.154166 0.27099 0.142801 0.143126 0.13817 0.24692 0.2659452 0.23162 0.054433 0.149723 0.134868 0.26228 0.015798 0.129197 0.081866 0.14242 0.080139 0.015328 0.169334 0.087565 0.066887 0.091395 0.090236 0.075504 0.215487 0.057703 0.082312 0.144704 0.017543 0.023697 0.026239 0.023697 0.034237 0.0055109 0.064064 0.071037 0.08981 0.066113 0.080657 4 0.195716 0.141403 0.0672120 6 0.30383 0.237457 0.06637500 8.1886e-05 0.9998909 weaklyHypermeth 0.040943 1.0000 weaklyHypermeth 0.0011403 0.99245851 weaklyHypermeth 0.57013 1.00000 insignificant 0.0250317 0.474555 lowCoverage 1 lowCoverage 0.195716 0.17401 0.144413 6 0.30383 0.27154 0.03228913 1.4782e-11 8.5147e-01 weaklyHypermeth 8.2120e-10 1.0000e+00 weaklyHypermeth 3.2547e-08 8.0153e-01 weaklyHypermeth 3.2547e-06 1.0000e+00 weaklyHypermeth 0.046272 2.3243e-01 lowCoverage 1.0000e+00 lowCoverage 0.195755 0.087470 0.0910654 5 0.32343 0.19607 0.1273599 4.5552e-05 9.8248e-01 weaklyHypermeth 4.1411e-03 1.0000000 weaklyHypermeth 0.00032952 0.99487644 weaklyHypermeth 0.046479 1.00000 weaklyHypermeth 0.0344662 0.2157770 lowCoverage 1.00000 lowCoverage 0.141403 0.17401 0.077684 6 0.237457 0.27154 -0.034086 4.4147e-06 3.0410e-01 weaklyHypermeth 1.6351e-04 1.0000e+00 weaklyHypermeth 3.0322e-05 7.1488e-01 weaklyHypermeth 1.5161e-03 1.0000e+00 weaklyHypermeth 0.021240 6.0127e-01 insignificant 1.0000e+00 insignificant 0.141447 0.087470 0.0241342 5 0.252332 0.19607 0.0562647 1.1591e-01 8.0887e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9964e-01 0.9123918 insignificant 1.0000000 1 insignificant 0.00943452 0.7640645 lowCoverage 1.00000 lowCoverage 0.17214 0.087470 -0.061569 5 0.16748 0.19607 -0.028590 9.8289e-01 7.5612e-08 weaklyHypometh 1.0000e+00 9.4515e-06 weaklyHypometh 0.99564442 7.7526e-05 weaklyHypometh 1.00000 1.1075e-02 weaklyHypometh -0.0118054 7.3264e-01 lowCoverage 1.00000000 lowCoverage chr2 42222374 42223374 16461 PKDCC ENSG00000162878 0.306428 189 6 0.264491 325 6 0.231512 362 6 0.42652 172 4 0.181591 207 5 0.39043 344 5 0.187601 159 5 0.252361 261 4 0.126282 219 5 0.263605 263 5 0.450262 177 5 0.23568 166 4 0.11251 210 4 0.124403 126 4 0.215338 387 5 0.214296 210 4 0.11111 16 0 0.315860 204 4 0.2769338 242 5 0.29500 196 5 0.104186 115 5 0.192896 143 5 0.370388 217 6 0.233791 189 7 0.158159 98 5 0.333040 320 6 0.143056 420 5 0.085655 115 5 0.2997275 202 4 0.31010 346 6 0.25579 296 6 0.2021628 290 6 0.130392 276 6 0.10952 82 4 0.28515 161 6 0.200000 22 3 0.21925 110 5 0.27272 234 6 0.181211 194 4 0.235774 186 5 0.21250 164 4 0.26205 156 4 0.18169 146 5 0.165483 0.145818 0.14566 0.17524 0.154166 0.27099 0.142801 0.143126 0.13817 0.24692 0.2659452 0.23162 0.054433 0.149723 0.134868 0.26228 0.015798 0.129197 0.081866 0.14242 0.080139 0.015328 0.169334 0.087565 0.066887 0.091395 0.090236 0.075504 0.215487 0.057703 0.082312 0.144704 0.017543 0.023697 0.026239 0.023697 0.034237 0.0055109 0.064064 0.071037 0.08981 0.066113 0.080657 4 0.195716 0.141403 0.0672120 6 0.30383 0.237457 0.06637500 8.1886e-05 0.9998909 weaklyHypermeth 0.040943 1.0000 weaklyHypermeth 0.0011403 0.99245851 weaklyHypermeth 0.57013 1.00000 insignificant 0.0250317 0.474555 lowCoverage 1 lowCoverage 0.195716 0.17401 0.144413 6 0.30383 0.27154 0.03228913 1.4782e-11 8.5147e-01 weaklyHypermeth 8.2120e-10 1.0000e+00 weaklyHypermeth 3.2547e-08 8.0153e-01 weaklyHypermeth 3.2547e-06 1.0000e+00 weaklyHypermeth 0.046272 2.3243e-01 lowCoverage 1.0000e+00 lowCoverage 0.195755 0.087470 0.0910654 5 0.32343 0.19607 0.1273599 4.5552e-05 9.8248e-01 weaklyHypermeth 4.1411e-03 1.0000000 weaklyHypermeth 0.00032952 0.99487644 weaklyHypermeth 0.046479 1.00000 weaklyHypermeth 0.0344662 0.2157770 lowCoverage 1.00000 lowCoverage 0.141403 0.17401 0.077684 6 0.237457 0.27154 -0.034086 4.4147e-06 3.0410e-01 weaklyHypermeth 1.6351e-04 1.0000e+00 weaklyHypermeth 3.0322e-05 7.1488e-01 weaklyHypermeth 1.5161e-03 1.0000e+00 weaklyHypermeth 0.021240 6.0127e-01 insignificant 1.0000e+00 insignificant 0.141447 0.087470 0.0241342 5 0.252332 0.19607 0.0562647 1.1591e-01 8.0887e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9964e-01 0.9123918 insignificant 1.0000000 1 insignificant 0.00943452 0.7640645 lowCoverage 1.00000 lowCoverage 0.17214 0.087470 -0.061569 5 0.16748 0.19607 -0.028590 9.8289e-01 7.5612e-08 weaklyHypometh 1.0000e+00 9.4515e-06 weaklyHypometh 0.99564442 7.7526e-05 weaklyHypometh 1.00000 1.1075e-02 weaklyHypometh -0.0118054 7.3264e-01 lowCoverage 1.00000000 lowCoverage chr2 43162506 43163506 16511 ENSG00000218916 0.943878 52 7 0.792418 127 7 0.627706 35 4 0.96429 46 3 0.826984 39 3 0.97922 70 5 0.800000 13 0 0.835102 83 7 0.785714 39 4 0.869048 46 4 0.920706 230 7 0.61905 13 0 0.94028 138 7 NA 0 0 0.819048 59 6 0.690476 19 0 0.60000 8 0 0.809524 49 6 0.9803146 171 7 0.89331 83 7 0.919913 67 6 0.500000 6 0 0.886735 36 4 0.843537 29 3 0.700000 9 0 0.927361 185 7 0.913396 67 7 0.166667 4 0 0.8254783 129 7 0.95177 246 7 0.92395 187 7 0.9151420 81 7 0.485616 133 7 0.58136 163 7 0.39683 107 4 0.059028 27 4 0.69643 38 5 0.42615 233 7 0.738095 14 0 0.848942 91 7 0.90000 21 3 0.70340 37 4 0.65986 47 5 0.946911 0.825587 0.68387 0.93243 0.834835 0.98034 0.756005 0.826641 0.86937 0.87613 0.9319300 0.63063 0.952478 NA 0.860360 0.72523 0.683874 0.842342 0.985336 0.91109 0.935708 0.788215 0.908301 0.860360 0.787338 0.954163 0.932234 0.576017 0.838399 0.958761 0.914096 0.936471 0.603751 0.709387 0.613797 0.558915 0.804054 0.5526299 0.788288 0.841366 0.89242 0.736165 0.725440 0 0.896970 0.926386 -0.0301595 7 0.87764 0.912323 -0.03468173 9.8393e-01 0.1360522 insignificant 1.000000 1.0000 insignificant 0.5828848 0.74176776 insignificant 1.00000 1.00000 insignificant 0.0366648 0.623747 lowCoverage 1 lowCoverage 0.896970 0.39515 0.409571 6 0.87764 0.49183 0.38581510 1.3352e-28 9.9969e-01 hypermethylated 2.2253e-26 1.0000e+00 hypermethylated 5.5322e-07 9.9986e-01 hypermethylated 3.6881e-05 1.0000e+00 hypermethylated 0.385260 5.9520e-03 lowCoverage 2.5696e-01 lowCoverage 0.896970 0.780952 0.1083897 5 0.87764 0.75867 0.1189725 2.5862e-04 9.9911e-01 weaklyHypermeth 1.7241e-02 1.0000000 weaklyHypermeth 0.32107529 0.93751777 insignificant 1.000000 1.00000 insignificant 0.0561004 0.3231887 lowCoverage 1.00000 lowCoverage 0.926386 0.39515 0.525313 6 0.912323 0.49183 0.420497 1.6853e-23 9.9992e-01 hypermethylated 2.4075e-21 1.0000e+00 hypermethylated 2.3351e-06 9.9937e-01 hypermethylated 2.5946e-04 1.0000e+00 hypermethylated 0.348596 9.7354e-03 lowCoverage 3.6057e-01 lowCoverage 0.926386 0.780952 0.1386207 5 0.912323 0.75867 0.1536542 1.9052e-04 9.9967e-01 weaklyHypermeth 1.5877e-02 1.0000000 weaklyHypermeth 2.5097e-01 0.9484111 insignificant 1.0000000 1 insignificant 0.01943564 0.8144475 lowCoverage 1.00000 lowCoverage 0.39515 0.780952 -0.229139 4 0.49183 0.75867 -0.266843 9.8185e-01 1.7852e-05 lowCoverage 1.0000e+00 8.9261e-04 lowCoverage 0.99739552 2.1958e-03 lowCoverage 1.00000 1.1343e-01 lowCoverage -0.3291600 1.2083e-02 lowCoverage 0.57538752 lowCoverage chr2 43267172 43268172 16517 ENSG00000207087 0.551720 101 6 0.353146 123 7 0.580045 84 7 0.55286 83 5 0.430060 36 2 0.80456 136 7 0.427273 48 4 0.400340 154 5 0.375013 114 6 0.594048 97 5 0.591452 151 6 0.61879 41 2 0.27715 175 6 0.401429 116 5 0.412422 186 6 0.381618 39 2 0.16667 26 3 0.677092 111 5 0.4124862 127 6 0.21555 169 6 0.781633 49 4 0.204167 85 5 0.540234 62 6 0.371429 62 3 0.601648 72 6 0.648819 191 7 0.620226 89 6 0.353175 32 4 0.5597382 78 6 0.62490 192 7 0.35757 167 7 0.7933495 123 6 0.264842 135 6 0.43213 61 6 0.36988 63 3 0.625000 13 1 0.76046 64 6 0.40170 140 7 0.477971 79 6 0.557172 79 6 0.45238 61 5 0.21487 70 3 0.41522 76 5 0.464759 0.400525 0.39406 0.51568 0.455410 0.70961 0.249955 0.294062 0.30165 0.55579 0.5521091 0.41759 0.281369 0.379898 0.267404 0.41743 0.180462 0.636471 0.328053 0.26764 0.648183 0.215039 0.503694 0.334517 0.616864 0.589361 0.508896 0.468909 0.511869 0.550897 0.328006 0.727409 0.241971 0.517374 0.739022 0.775607 0.692933 0.4454660 0.453390 0.475154 0.40286 0.307811 0.426887 2 0.418440 0.526622 -0.1019099 6 0.53028 0.563094 -0.03281525 9.9559e-01 0.0008528 weaklyHypometh 1.000000 0.8528 insignificant 0.9213507 0.02323964 weaklyHypometh 1.00000 1.00000 insignificant -0.0768888 0.237121 insignificant 1 insignificant 0.418440 0.46218 -0.048735 6 0.53028 0.51810 0.01217387 1.2436e-01 4.2166e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.7617e-01 1.0165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.014483 8.6526e-01 lowCoverage 1.0000e+00 lowCoverage 0.418165 0.427397 -0.0079453 6 0.46318 0.47035 -0.0071751 2.5255e-01 3.0422e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.10992139 0.33109018 insignificant 1.000000 1.00000 insignificant 0.0376616 0.5916009 insignificant 1.00000 insignificant 0.526622 0.46218 0.068329 6 0.563094 0.51810 0.044989 1.3744e-03 4.7990e-01 weaklyHypermeth 3.7145e-02 1.0000e+00 weaklyHypermeth 4.2796e-02 3.8527e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.062406 5.0851e-01 lowCoverage 1.0000e+00 lowCoverage 0.526667 0.427397 0.1001926 6 0.572107 0.47035 0.1017566 9.0062e-03 8.9771e-01 weaklyHypermeth 6.0042e-01 1.0000000 insignificant 3.3366e-02 0.9323110 weaklyHypermeth 1.0000000 1 insignificant 0.11455037 0.1678960 insignificant 1.00000 insignificant 0.46105 0.427397 0.046406 6 0.44926 0.47035 -0.021088 9.5273e-02 1.2252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08327570 3.2346e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0521449 5.9236e-01 lowCoverage 1.00000000 lowCoverage chr2 44859231 44860231 16712 C2orf34 ENSG00000143919 0.031818 34 3 0.024129 216 6 0.041667 73 6 0.03125 51 3 0.019931 167 6 0.00000 80 3 0.019883 101 6 0.059944 144 6 0.055556 87 6 0.041667 48 6 0.089988 209 6 0.11458 63 6 0.00000 27 3 0.041667 18 0 0.011905 49 3 0.037037 45 6 NA 0 0 0.030303 28 3 0.0092593 54 3 0.00000 69 3 0.042105 57 6 0.080952 25 3 0.084541 71 3 0.048611 63 5 0.044444 43 5 0.020062 230 6 0.052026 116 6 0.000000 36 3 0.0079365 69 3 0.00000 226 6 0.00000 232 6 0.0069444 78 3 0.707550 134 6 0.68640 109 6 0.21111 51 3 NA 0 0 0.67695 150 6 0.62564 147 6 0.013764 112 3 0.035575 60 3 0.10951 102 6 0.23810 21 3 0.16192 91 6 0.063636 0.014925 0.00000 0.06250 0.010101 0.00000 0.017544 0.048459 0.00000 0.00000 0.0074074 0.00000 0.000000 0.083333 0.023810 0.00000 NA 0.030303 0.018519 0.00000 0.084211 0.000000 0.084541 0.000000 0.033333 0.000000 0.034211 0.000000 0.015873 0.000000 0.000000 0.013889 0.700815 0.706130 0.333333 NA 0.631684 0.7179487 0.027528 0.071150 0.05235 0.238095 0.073844 0 0.037748 0.021669 0.0151805 6 0.05408 0.028551 0.02552840 5.3271e-02 0.9816427 insignificant 1.000000 1.0000 insignificant 0.6866891 0.49856465 insignificant 1.00000 1.00000 insignificant 0.0024658 0.828404 lowCoverage 1 lowCoverage 0.037748 0.63283 -0.579754 6 0.05408 0.56880 -0.51471948 1.0000e+00 1.2656e-52 hypomethylated 1.0000e+00 1.2656e-49 hypomethylated 1.0000e+00 3.5038e-13 hypomethylated 1.0000e+00 3.5038e-10 hypomethylated -0.546763 4.1793e-03 lowCoverage 1.8997e-01 lowCoverage 0.037748 0.080311 -0.0530992 3 0.05408 0.12426 -0.0701820 9.1741e-01 2.3481e-06 lowCoverage 1.0000e+00 0.0023481 lowCoverage 0.97492821 0.00073979 lowCoverage 1.000000 0.73979 lowCoverage -0.0770052 0.1349366 lowCoverage 1.00000 lowCoverage 0.021669 0.63283 -0.609099 6 0.028551 0.56880 -0.540248 1.0000e+00 2.4701e-36 hypomethylated 1.0000e+00 2.4701e-33 hypomethylated 1.0000e+00 3.6522e-10 hypomethylated 1.0000e+00 3.6522e-07 hypomethylated -0.549229 4.0440e-03 lowCoverage 1.7583e-01 lowCoverage 0.021669 0.080311 -0.0614135 3 0.028551 0.12426 -0.0957104 9.7662e-01 5.5470e-07 lowCoverage 1.0000e+00 0.0005547 lowCoverage 9.5618e-01 0.0024351 lowCoverage 1.0000000 1 lowCoverage -0.07947102 0.1260070 lowCoverage 1.00000 lowCoverage 0.63283 0.080311 0.568297 3 0.56880 0.12426 0.444537 2.9805e-14 1.0000e+00 lowCoverage 2.9805e-11 1.0000e+00 lowCoverage 0.00001993 1.0000e+00 lowCoverage 0.01993 1.0000e+00 lowCoverage 0.4697579 4.6420e-03 lowCoverage 0.25491177 lowCoverage chr2 45414074 45415074 16783 ENSG00000205054 0.961818 53 5 0.950000 20 1 0.700000 7 0 0.96000 25 5 1.000000 10 0 0.94333 50 5 0.700000 9 0 0.650714 30 5 0.700000 7 0 0.910000 21 1 0.937179 58 5 0.90000 7 0 0.89328 112 5 0.940000 50 5 1.000000 11 0 0.000000 3 0 1.00000 5 0 0.903663 72 5 1.0000000 8 0 1.00000 8 0 0.000000 1 0 0.942857 32 5 0.800000 7 0 1.000000 25 5 0.900000 40 5 0.950000 15 0 0.920000 48 5 0.000000 4 0 0.9500000 23 3 0.94643 36 5 0.97143 30 5 0.9418182 49 5 0.800000 5 0 0.85333 27 5 0.50000 2 0 0.857143 35 5 0.83333 17 0 0.90000 30 5 1.000000 6 0 0.889286 36 5 0.72000 25 5 0.68333 16 0 0.60160 58 5 0.963287 0.951923 0.69231 0.95385 1.000000 0.94231 0.692308 0.649725 0.71154 0.91346 0.9395957 0.90385 0.890696 0.942308 1.000000 0.35057 1.000000 0.902240 1.000000 1.00000 NA 0.939560 0.788462 1.000000 0.894231 0.951923 0.919231 0.541758 0.951923 0.948489 0.972527 0.940559 0.807692 0.852564 0.694322 0.862637 0.839744 0.9038462 1.000000 0.888736 0.71538 0.682692 0.603188 0 0.899293 0.919355 -0.0204714 3 0.90044 0.921405 -0.02096399 9.2131e-01 0.2357312 lowCoverage 1.000000 1.0000 lowCoverage 0.7031519 0.37520734 lowCoverage 1.00000 1.00000 lowCoverage 0.0756217 0.529158 lowCoverage 1 lowCoverage 0.899293 0.85345 0.046346 0 0.90044 0.85313 0.04730814 3.6638e-02 6.5558e-01 noCoverage 6.7849e-01 1.0000e+00 noCoverage 7.5130e-02 5.5563e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.061865 4.4650e-01 lowCoverage 1.0000e+00 lowCoverage 0.899293 0.723404 0.1754942 5 0.90044 0.72493 0.1755143 2.3906e-07 1.0000e+00 weaklyHypermeth 2.9883e-05 1.0000000 weaklyHypermeth 0.00208390 0.99927534 weaklyHypermeth 0.231544 1.00000 insignificant 0.0736553 0.4301577 lowCoverage 1.00000 lowCoverage 0.919355 0.85345 0.066559 0 0.921405 0.85313 0.068272 6.8809e-03 6.4752e-01 noCoverage 1.6383e-01 1.0000e+00 noCoverage 2.2745e-02 5.6901e-01 noCoverage 6.8925e-01 1.0000e+00 noCoverage -0.013757 9.1118e-01 lowCoverage 1.0000e+00 lowCoverage 0.919355 0.723404 0.1960929 3 0.921405 0.72493 0.1964783 8.6697e-08 9.9999e-01 lowCoverage 2.1674e-05 1.0000000 lowCoverage 8.2949e-04 0.9997623 lowCoverage 0.1184989 1 lowCoverage -0.00196645 0.9879629 lowCoverage 1.00000 lowCoverage 0.85345 0.723404 0.128519 0 0.85313 0.72493 0.128206 1.3161e-03 9.8379e-01 noCoverage 3.2904e-01 1.0000e+00 noCoverage 0.04414685 9.5975e-01 noCoverage 1.00000 1.0000e+00 noCoverage 0.0117908 9.0306e-01 lowCoverage 1.00000000 lowCoverage chr2 47712225 47713225 16890 KCNK12 ENSG00000184261 0.932863 257 5 0.848279 93 4 0.763095 55 4 0.91288 273 5 1.000000 18 1 0.95934 225 5 0.900568 41 4 0.958333 77 4 0.860412 80 4 0.956880 94 4 0.941361 138 4 0.83929 19 1 0.88444 82 4 0.964286 30 4 0.887500 58 4 0.812500 29 4 0.92708 29 4 0.867506 323 5 0.8879870 53 4 0.93750 173 4 0.791667 25 3 0.803492 71 4 0.914402 94 4 0.933364 85 4 0.937729 60 4 0.778215 137 4 0.817179 51 4 0.920635 65 4 0.8663095 85 4 0.93545 99 4 0.96864 109 4 0.9022456 208 5 0.757495 91 4 0.92965 74 4 1.00000 79 3 0.958333 12 1 0.74145 57 4 0.95142 118 5 0.907326 226 5 0.893443 231 5 0.85540 264 5 0.86123 224 5 0.88163 206 5 0.949938 0.851519 0.76600 0.90143 1.000000 0.94950 0.900546 0.963394 0.85626 0.95528 0.9420932 0.84884 0.887698 0.961240 0.887597 0.80426 0.919897 0.874652 0.893386 0.91956 0.799742 0.803404 0.915993 0.934978 0.939575 0.914975 0.817798 0.918051 0.866608 0.919564 0.955556 0.930727 0.752783 0.931038 0.964828 0.954780 0.740277 0.9344398 0.897211 0.899078 0.81774 0.840919 0.873024 4 0.911039 0.905157 0.0050237 4 0.90679 0.891518 0.01526829 2.3278e-01 0.8060315 lowCoverage 1.000000 1.0000 lowCoverage 0.6205313 0.82745870 lowCoverage 1.00000 1.00000 lowCoverage 0.0213277 0.369020 lowCoverage 1 lowCoverage 0.911039 0.88863 0.017693 4 0.90679 0.90765 -0.00086767 2.4513e-01 5.2576e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9057e-01 6.1575e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.012379 8.0217e-01 lowCoverage 1.0000e+00 lowCoverage 0.911039 0.875760 0.0389884 5 0.90679 0.88083 0.0259597 1.2731e-02 7.2142e-01 weaklyHypermeth 6.1042e-01 1.0000000 insignificant 0.03392088 0.98387017 weaklyHypermeth 1.000000 1.00000 insignificant 0.0222999 0.1877367 lowCoverage 1.00000 lowCoverage 0.905157 0.88863 0.017977 4 0.891518 0.90765 -0.016136 4.8405e-01 6.1489e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6712e-01 6.6822e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.008949 8.6109e-01 lowCoverage 1.0000e+00 lowCoverage 0.905157 0.875760 0.0390060 4 0.891518 0.88083 0.0106914 4.6372e-02 3.5909e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 5.3602e-02 0.9459170 lowCoverage 1.0000000 1 lowCoverage 0.00097217 0.9645502 lowCoverage 1.00000 lowCoverage 0.88863 0.875760 0.029313 4 0.90765 0.88083 0.026827 8.2159e-02 6.3608e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.15481182 6.7530e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0099212 8.3843e-01 lowCoverage 1.00000000 lowCoverage chr2 47730257 47731257 16891 KCNK12 ENSG00000184261 0.927295 215 5 0.872365 95 5 0.830896 102 5 0.87920 93 5 0.922381 66 5 0.90919 170 5 0.874352 133 5 0.963612 78 5 0.858969 98 5 0.943722 78 5 0.910418 124 5 0.85167 61 5 0.96415 118 5 NA 0 0 0.940278 118 5 0.922222 54 5 0.82476 47 5 0.925180 90 5 1.0000000 39 5 0.90560 166 5 0.867857 37 5 0.810806 63 5 0.800562 164 5 0.962500 55 5 0.971429 35 5 0.954545 106 5 0.923077 104 5 0.971429 55 5 0.9501412 88 5 0.90158 132 5 0.90308 79 5 0.9323042 205 5 0.133579 112 5 0.13488 75 5 0.24153 71 2 0.029293 65 5 0.25303 67 5 0.16006 147 5 0.958074 131 5 0.898003 188 5 0.91435 150 5 0.87553 160 5 0.90114 104 5 0.934023 0.870336 0.84867 0.87125 0.907256 0.90632 0.879502 0.961992 0.87038 0.95590 0.9049204 0.85655 0.955956 NA 0.933697 0.93122 0.846032 0.933416 1.000000 0.90628 0.863095 0.812576 0.798149 0.946429 0.965986 0.962121 0.939560 0.976190 0.941605 0.902144 0.909158 0.927350 0.137030 0.128210 0.177937 0.028860 0.259064 0.1814925 0.943915 0.887577 0.90762 0.881333 0.891504 5 0.909512 0.905610 0.0035351 5 0.90720 0.906415 0.00078344 5.4646e-01 0.6344144 insignificant 1.000000 1.0000 insignificant 0.8996145 0.32196556 insignificant 1.00000 1.00000 insignificant -0.0057977 0.776480 lowCoverage 1 lowCoverage 0.909512 0.16015 0.749100 5 0.90720 0.14964 0.75755949 3.4642e-64 1.0000e+00 hypermethylated 3.4642e-61 1.0000e+00 hypermethylated 1.6503e-13 1.0000e+00 hypermethylated 1.6503e-10 1.0000e+00 hypermethylated 0.747915 6.2784e-07 lowCoverage 8.9691e-05 lowCoverage 0.909512 0.893588 0.0119006 5 0.90720 0.90292 0.0042757 2.5642e-01 6.6156e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.30060777 0.41581875 insignificant 1.000000 1.00000 insignificant -0.0027743 0.8766906 lowCoverage 1.00000 lowCoverage 0.905610 0.16015 0.744359 5 0.906415 0.14964 0.756776 3.1496e-43 1.0000e+00 hypermethylated 3.1496e-40 1.0000e+00 hypermethylated 7.3373e-12 1.0000e+00 hypermethylated 7.3373e-09 1.0000e+00 hypermethylated 0.753713 6.5857e-08 lowCoverage 2.1952e-05 lowCoverage 0.905610 0.893588 0.0069617 5 0.906415 0.90292 0.0034923 5.8875e-01 7.5826e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9638e-01 0.8215242 insignificant 1.0000000 1 insignificant 0.00302347 0.8918185 insignificant 1.00000 insignificant 0.16015 0.893588 -0.736699 5 0.14964 0.90292 -0.753284 1.0000e+00 2.9125e-24 hypomethylated 1.0000e+00 2.9125e-21 hypomethylated 1.00000000 4.5793e-08 hypomethylated 1.00000 4.5793e-05 hypomethylated -0.7506894 3.0810e-07 lowCoverage 0.00015405 lowCoverage chr2 48031518 48032518 16896 ENSG00000217681 0.849338 175 5 0.828210 173 6 0.799654 107 5 0.89935 155 5 0.784167 115 5 0.72488 284 6 0.851561 107 5 0.633214 123 5 0.799647 112 6 0.828092 137 5 0.859629 200 6 0.81205 79 5 0.90770 145 6 0.782051 42 2 0.861764 140 5 0.909879 93 4 0.69189 82 6 0.731256 130 4 0.7919081 84 5 0.85986 232 6 0.691438 52 5 0.858830 88 6 0.677457 140 6 0.820936 82 5 0.892443 58 4 0.821073 169 5 0.880762 98 6 0.886576 73 6 0.8669732 121 6 0.81631 176 5 0.85900 175 5 0.8388825 300 6 0.512400 144 5 0.54107 89 6 0.56919 143 5 0.566176 59 3 0.70001 111 4 0.66474 149 6 0.882918 176 5 0.865074 162 5 0.86856 135 6 0.86768 144 5 0.85643 185 5 0.755154 0.782450 0.78008 0.81067 0.725427 0.78599 0.799214 0.700573 0.73629 0.74018 0.7813516 0.72199 0.826917 0.769996 0.806485 0.84239 0.523158 0.694538 0.792705 0.76443 0.740452 0.813983 0.710484 0.757974 0.834379 0.744051 0.855298 0.855029 0.787923 0.797352 0.781693 0.749119 0.454798 0.416651 0.426371 0.620229 0.579063 0.5766842 0.800408 0.809121 0.80182 0.801615 0.816480 4 0.791897 0.804178 -0.0115311 6 0.80356 0.820085 -0.01652762 7.6337e-01 0.4104989 insignificant 1.000000 1.0000 insignificant 0.8110662 0.33517585 insignificant 1.00000 1.00000 insignificant -0.0155844 0.556378 insignificant 1 insignificant 0.791897 0.51511 0.265368 5 0.80356 0.61278 0.19077877 8.1815e-18 9.6213e-01 hypermethylated 6.8179e-16 1.0000e+00 hypermethylated 2.1121e-05 9.7813e-01 hypermethylated 1.0058e-03 1.0000e+00 hypermethylated 0.218041 1.9563e-04 lowCoverage 1.5048e-02 lowCoverage 0.791897 0.831671 -0.0481312 5 0.80356 0.87874 -0.0751792 9.9352e-01 3.9026e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 0.99962835 0.00896138 weaklyHypometh 1.000000 1.00000 insignificant -0.0578267 0.0023588 weaklyHypometh 0.32283 insignificant 0.804178 0.51511 0.281434 5 0.820085 0.61278 0.207306 1.9913e-12 9.9517e-01 hypermethylated 1.5318e-10 1.0000e+00 hypermethylated 1.0869e-05 9.8869e-01 hypermethylated 7.2458e-04 1.0000e+00 hypermethylated 0.233626 8.4213e-05 lowCoverage 1.0527e-02 lowCoverage 0.804178 0.831671 -0.0325500 5 0.820085 0.87874 -0.0586516 9.9702e-01 5.7614e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.9039e-01 0.0878637 insignificant 1.0000000 1 insignificant -0.04224225 0.0666473 insignificant 1.00000 insignificant 0.51511 0.831671 -0.306624 5 0.61278 0.87874 -0.265958 1.0000e+00 1.1767e-07 hypomethylated 1.0000e+00 1.3075e-05 hypomethylated 0.99999870 1.9268e-04 hypomethylated 1.00000 1.9354e-02 hypomethylated -0.2758678 2.1865e-04 lowCoverage 0.03123563 lowCoverage chr2 50075279 50076279 17025 ENSG00000211385,ENSG00000222823 0.81624 90 6 0.66823 132 6 0.69839 90 6 0.79803 98 6 0.60195 57 6 0.75055 325 6 0.75536 38 5 0.62644 95 6 0.61905 22 2 0.73313 61 6 0.74914 162 6 0.50926 54 4 0.71373 95 6 0.85985 70 6 0.78588 69 6 0.71759 34 2 0.73333 22 4 0.77470 135 6 0.81548 98 6 0.85518 328 6 0.74552 73 6 0.69754 108 6 0.71508 111 6 0.43496 102 6 0.73466 157 6 0.85996 128 6 0.78262 331 6 0.88307 66 6 0.72960 108 6 0.75396 156 6 0.65836 96 6 0.78026 223 6 0.54306 60 6 0.67532 50 6 0.74422 96 6 0.69444 23 3 0.52250 98 6 0.75261 106 6 0.68641 106 6 0.78043 122 6 0.77163 116 6 0.66916 56 5 0.77290 124 6 0.80266 0.66524 0.68609 0.69277 0.68275 0.74551 0.74189 0.62394 0.59905 0.71432 0.73121 0.50783 0.75940 0.85263 0.76799 0.71470 0.71271 0.76103 0.76957 0.82467 0.73657 0.69357 0.70348 0.55190 0.72059 0.82724 0.67064 0.82339 0.66689 0.69446 0.68460 0.73144 0.55051 0.65143 0.62868 0.67127 0.51859 0.73670 0.66741 0.76290 0.75732 0.64186 0.75093 5 0.75952 0.72272 0.04144192 6 0.73600 0.68502 0.050979 0.12356986 0.999953 insignificant 1.00000 1 insignificant 0.727826 0.99901477 insignificant 1 1.00000 insignificant -0.0022227 0.954202 insignificant 1 insignificant 0.76089 0.66282 0.114262 6 0.83607 0.75754 0.078523 1.8641e-05 0.99999 weaklyHypermeth 0.00310688 1 weaklyHypermeth 2.3814e-02 0.99277 weaklyHypermeth 1.000000 1 insignificant 0.073716 0.14425348 insignificant 1.00000 insignificant 0.76019 0.76908 0.0064581 6 0.75410 0.74421 0.0098893 0.294445 0.5081672 insignificant 1 1 insignificant 0.54080 0.467026 insignificant 1 1 insignificant -0.0070325 0.8262749 insignificant 1 insignificant 0.72380 0.66282 0.072067 6 0.76318 0.75754 0.0056327 0.07886681 0.96603 insignificant 1.000000 1 insignificant 0.17471019 0.96063 insignificant 1.00000 1 insignificant 0.075939 0.17183923 insignificant 1.00000 insignificant 0.72283 0.76908 -0.0392480 6 0.71143 0.74421 -0.0327789 0.83107502 0.0482978 weaklyHypometh 1.00000 1.00000 insignificant 0.761435 0.044648 weaklyHypometh 1 1 insignificant -0.0048098 0.9069914 insignificant 1 insignificant 0.66047 0.76908 -0.113915 6 0.63632 0.74421 -0.107895 0.85528 1.8022e-03 weaklyHypometh 1 0.20024474 insignificant 0.88615 2.1343e-02 weaklyHypometh 1 1.00000000 insignificant -0.080749 1.2600e-01 insignificant 1.000000 insignificant chr2 52254051 52255051 17194 ENSG00000220083 0.86916 754 7 0.82214 1052 6 0.79717 1360 6 0.76651 253 7 0.96578 708 6 0.84132 2944 7 0.75410 1614 5 0.90141 651 6 0.97960 812 5 0.95107 964 6 0.80922 915 6 0.82301 1044 5 0.84652 988 5 NA 0 0 0.98420 1835 5 0.92003 976 5 0.90779 1071 6 0.91290 360 7 0.89698 934 6 0.79901 2655 7 0.72472 301 6 0.72189 739 7 0.77384 330 8 0.79688 442 6 0.75370 655 5 0.85394 1303 6 0.77170 526 8 0.76623 139 6 0.75774 473 5 0.92840 1339 6 0.93425 1130 6 0.91284 4259 7 0.78714 645 6 0.66624 1089 6 0.82973 993 7 0.78466 954 6 0.69555 439 8 0.80298 1313 6 0.86506 734 8 0.79618 492 7 0.84441 277 8 0.86121 697 7 0.80935 599 7 0.91118 0.93232 0.93157 0.92381 0.97077 0.95374 0.94477 0.95800 0.94768 0.96220 0.94343 0.94840 0.96233 NA 0.96768 0.95134 0.95243 0.92515 0.93866 0.95438 0.94527 0.91709 0.95480 0.95888 0.94166 0.92859 0.93836 0.97195 0.94227 0.94339 0.95368 0.94729 0.93478 0.91955 0.92229 0.93662 0.92684 0.94308 0.95211 0.94967 0.94455 0.93662 0.94412 5 0.95295 0.93950 0.00515936 6 0.86038 0.78466 0.075721 0.00040528 0.994187 weaklyHypermeth 0.40528 1 insignificant 0.034253 0.95520273 weaklyHypermeth 1 1.00000 insignificant 0.0629323 0.034893 weaklyHypermeth 1 insignificant 0.95295 0.92858 0.016315 6 0.86038 0.74486 0.115526 5.0139e-07 0.99977 weaklyHypermeth 0.00012535 1 weaklyHypermeth 7.3725e-04 0.99334 weaklyHypermeth 0.207308 1 insignificant 0.109892 0.00618613 weaklyHypermeth 1.00000 insignificant 0.95295 0.94105 0.0040235 6 0.86038 0.84424 0.0161404 0.128036 0.7004364 insignificant 1 1 insignificant 0.24502 0.856710 insignificant 1 1 insignificant 0.0357017 0.1161379 insignificant 1 insignificant 0.93950 0.92858 0.011046 7 0.78466 0.74486 0.0398057 0.00932407 0.97219 weaklyHypermeth 0.777006 1 insignificant 0.03793342 0.97808 weaklyHypermeth 1.00000 1 insignificant 0.046960 0.20227502 insignificant 1.00000 insignificant 0.93950 0.94105 -0.0053890 6 0.78466 0.84424 -0.0595802 0.93866637 0.0214050 weaklyHypometh 1.00000 1.00000 insignificant 0.882562 0.258813 insignificant 1 1 insignificant -0.0272306 0.3214242 insignificant 1 insignificant 0.92858 0.94105 -0.018757 6 0.74486 0.84424 -0.099386 0.97887 3.2380e-04 weaklyHypometh 1 0.06475939 weaklyHypometh 0.98730 3.3420e-02 weaklyHypometh 1 1.00000000 insignificant -0.074190 4.0078e-02 weaklyHypometh 1.000000 insignificant chr2 52486372 52487372 17201 ENSG00000202195 0.66440 105 4 0.85833 69 5 0.70476 64 5 0.68235 53 3 0.73333 11 0 0.83379 223 5 0.63144 58 3 0.82095 80 5 0.85476 56 5 0.90989 70 5 0.79246 134 5 0.60242 35 3 0.91765 123 5 1.00000 2 0 0.82217 52 3 0.83333 6 0 0.79697 39 3 0.65095 86 4 0.82676 112 5 0.84802 138 5 0.82619 27 3 0.85682 33 3 0.74361 63 5 0.81465 45 5 0.95000 13 0 0.88076 81 5 0.82500 56 5 0.59375 25 3 0.82700 110 5 0.87895 106 5 0.91666 139 5 0.85569 172 5 0.76062 105 5 0.73117 82 5 0.91369 79 5 0.62000 34 3 0.61198 50 4 0.80655 140 5 0.74596 130 5 0.77197 147 5 0.68079 68 4 0.64542 103 4 0.79118 111 4 0.68953 0.86531 0.68633 0.78575 0.82875 0.82229 0.74879 0.76042 0.86730 0.87075 0.79758 0.62257 0.88907 NA 0.85045 0.84929 0.81811 0.73186 0.79272 0.80389 0.78091 0.82750 0.72617 0.81122 0.90596 0.83149 0.79159 0.74873 0.79586 0.88508 0.89316 0.81770 0.72696 0.71214 0.89411 0.67248 0.71459 0.77118 0.78973 0.79824 0.72745 0.74599 0.80855 3 0.81926 0.85057 -0.02546810 5 0.82169 0.85646 -0.034774 0.97524246 0.135063 insignificant 1.00000 1 insignificant 0.756289 0.21922876 insignificant 1 1.00000 insignificant -0.0415202 0.251373 lowCoverage 1 lowCoverage 0.81926 0.78367 0.041671 5 0.82169 0.78622 0.035464 2.1994e-02 0.96442 weaklyHypermeth 1.00000000 1 insignificant 2.3060e-02 0.99240 weaklyHypermeth 1.000000 1 insignificant 0.048569 0.38263724 lowCoverage 1.00000 lowCoverage 0.81926 0.79785 0.0293846 4 0.82169 0.73231 0.0893721 0.028124 0.8074883 lowCoverage 1 1 lowCoverage 0.14570 0.941594 lowCoverage 1 1 lowCoverage 0.0621752 0.1158793 lowCoverage 1 lowCoverage 0.85057 0.78367 0.065622 5 0.85646 0.78622 0.0702378 0.00170879 0.99912 weaklyHypermeth 0.155345 1 insignificant 0.00497763 0.99954 weaklyHypermeth 0.49776 1 insignificant 0.090090 0.13108150 lowCoverage 1.00000 lowCoverage 0.85057 0.79785 0.0591643 4 0.85646 0.73231 0.1241462 0.00050704 0.9685857 lowCoverage 0.50704 1.00000 lowCoverage 0.018203 0.956475 lowCoverage 1 1 lowCoverage 0.1036954 0.0198500 lowCoverage 1 lowCoverage 0.78367 0.79785 -0.011899 4 0.78622 0.73231 0.053908 0.12481 1.3181e-01 lowCoverage 1 1.00000000 lowCoverage 0.63934 6.5518e-02 lowCoverage 1 1.00000000 lowCoverage 0.013606 8.0894e-01 lowCoverage 1.000000 lowCoverage chr2 53724371 53725371 17288 ENSG00000207456 0.86031 273 8 0.77419 141 8 0.78044 125 8 0.85586 157 8 0.94006 83 5 0.74024 313 8 0.83128 114 8 0.80163 128 8 0.71066 82 5 0.91052 122 8 0.90641 181 8 0.80320 88 7 0.86945 176 8 0.85000 20 2 0.83856 145 8 0.88019 80 8 0.89766 93 7 0.84581 147 8 0.80992 149 8 0.71828 278 9 0.75926 39 3 0.87481 103 8 0.82074 203 8 0.86553 70 5 0.85089 61 8 0.83163 129 8 0.85583 57 5 0.84127 68 8 0.86444 134 7 0.85363 155 8 0.84390 153 8 0.77084 326 8 0.71561 129 8 0.70030 131 8 0.76042 147 8 0.83161 89 6 0.83864 64 8 0.69632 183 8 0.87507 272 8 0.88236 265 8 0.87909 332 8 0.88075 297 8 0.85724 290 8 0.85857 0.77032 0.80560 0.87492 0.93567 0.78047 0.84223 0.78868 0.79458 0.89998 0.89517 0.89171 0.85611 0.84670 0.84542 0.87409 0.89116 0.85092 0.82007 0.81627 0.86680 0.89126 0.83088 0.84596 0.85450 0.83074 0.86510 0.81909 0.85234 0.84699 0.84718 0.80923 0.73275 0.71662 0.75225 0.81716 0.85382 0.80180 0.88659 0.88900 0.88833 0.88910 0.86483 5 0.83592 0.83445 -0.00013123 8 0.79388 0.81846 -0.024588 0.67094132 0.342357 insignificant 1.00000 1 insignificant 0.643626 0.39785650 insignificant 1 1.00000 insignificant -0.0048304 0.787320 insignificant 1 insignificant 0.83592 0.77254 0.064388 8 0.79388 0.68193 0.111942 5.4822e-05 0.99244 weaklyHypermeth 0.00783177 1 weaklyHypermeth 8.7543e-05 0.99710 weaklyHypermeth 0.043771 1 weaklyHypermeth 0.074083 0.03805290 weaklyHypermeth 1.00000 insignificant 0.83855 0.89217 -0.0421283 8 0.83359 0.87350 -0.0399126 0.988670 0.0024307 weaklyHypometh 1 1 insignificant 0.96508 0.015716 weaklyHypometh 1 1 insignificant -0.0436692 0.0081303 weaklyHypometh 1 insignificant 0.83445 0.77254 0.063994 8 0.81846 0.68193 0.1365301 0.00023122 0.99913 weaklyHypermeth 0.028903 1 weaklyHypermeth 0.00157635 0.99997 weaklyHypermeth 0.26273 1 insignificant 0.078913 0.02879247 weaklyHypermeth 1.00000 insignificant 0.83501 0.89217 -0.0429283 8 0.83149 0.87350 -0.0420134 0.99035546 0.0011376 weaklyHypometh 1.00000 0.56881 insignificant 0.931792 0.037679 weaklyHypometh 1 1 insignificant -0.0388387 0.0043619 weaklyHypometh 1 insignificant 0.77463 0.89217 -0.105487 8 0.76718 0.87350 -0.106324 0.99999 2.6188e-07 weaklyHypometh 1 0.00013094 weaklyHypometh 0.99948 5.8862e-07 weaklyHypometh 1 0.00058862 weaklyHypometh -0.117752 6.1244e-03 weaklyHypometh 1.000000 insignificant chr2 59145512 59146512 17861 ENSG00000219858 0.81869 181 6 0.77592 100 7 0.83490 78 8 0.82372 101 6 0.92869 67 6 0.89480 189 8 0.75670 73 7 0.82857 47 6 0.74038 52 4 0.81443 54 4 0.93928 164 8 0.86562 63 8 0.94353 69 2 NA 0 0 0.87872 54 4 0.78646 48 5 0.77976 56 2 0.95396 122 5 0.77937 58 5 0.88463 183 8 0.95833 37 4 0.85185 29 3 0.86978 113 8 0.91667 31 2 0.73750 37 4 0.96086 81 5 0.84487 67 6 1.00000 25 2 0.90817 51 3 0.94521 89 6 0.80192 88 5 0.89030 225 8 0.78488 133 7 0.78063 71 6 0.81196 239 8 0.76667 41 4 0.74422 41 2 0.75040 86 4 0.91254 200 6 0.85160 233 6 0.90445 150 6 0.91364 185 6 0.93351 105 6 0.87093 0.80756 0.78153 0.84860 0.90643 0.82838 0.79470 0.86755 0.84615 0.86131 0.92732 0.82818 0.94472 NA 0.81649 0.83016 0.83414 0.96376 0.84236 0.89247 1.00000 0.79002 0.90365 0.81947 0.90464 0.95900 0.90858 1.00000 0.82635 0.97694 0.88403 0.81238 0.74883 0.79068 0.76602 0.81466 0.68309 0.83575 0.86397 0.90198 0.89925 0.88061 0.90533 2 0.86754 0.88087 -0.01388408 6 0.86405 0.88612 -0.022065 0.89934946 0.087644 insignificant 1.00000 1 insignificant 0.997964 0.00091563 weaklyHypometh 1 0.45781 insignificant -0.0468696 0.089953 lowCoverage 1 lowCoverage 0.86754 0.79705 0.070701 6 0.86405 0.80890 0.055153 1.1448e-03 0.94171 weaklyHypermeth 0.11448144 1 insignificant 9.4027e-03 0.90880 weaklyHypermeth 1.000000 1 insignificant 0.070459 0.00093044 weaklyHypermeth 0.93044 insignificant 0.86754 0.90951 -0.0256047 6 0.86405 0.89328 -0.0292259 0.873314 0.1953788 insignificant 1 1 insignificant 0.78602 0.046763 weaklyHypometh 1 1 insignificant -0.0595600 0.0112678 weaklyHypometh 1 insignificant 0.88087 0.79705 0.087450 6 0.88612 0.80890 0.0772185 0.00017803 0.99969 weaklyHypermeth 0.025433 1 weaklyHypermeth 0.00015526 0.99989 weaklyHypermeth 0.14551 1 insignificant 0.117329 0.00018293 lowCoverage 0.12464 lowCoverage 0.88087 0.90951 -0.0086063 6 0.88612 0.89328 -0.0071607 0.27948350 0.5156138 insignificant 1.00000 1.00000 insignificant 0.022065 0.963526 inconclusive 1 1 insignificant -0.0126904 0.6257584 lowCoverage 1 lowCoverage 0.79705 0.90951 -0.098534 6 0.80890 0.89328 -0.084379 0.97870 1.3691e-03 weaklyHypometh 1 0.17113397 insignificant 0.92597 2.2903e-03 weaklyHypometh 1 0.76342480 insignificant -0.130019 7.5624e-05 weaklyHypometh 0.075624 weaklyHypometh chr2 59813878 59814878 18044 ENSG00000209301 0.89755 185 6 0.71548 71 5 0.86332 82 6 0.85857 159 5 0.79167 38 3 0.87724 242 5 0.89409 90 6 0.79243 83 6 0.89550 62 5 0.95588 98 6 0.91365 116 6 0.97932 67 3 0.878605 139 6 0.96466 57 5 0.89521 101 6 0.89583 40 3 0.77778 28 2 0.78853 207 5 0.97917 61 4 0.92695 146 5 0.76667 16 1 0.577395 77 5 0.96978 133 6 0.959207 78 6 0.87941 56 5 0.88179 114 6 0.78626 82 6 0.70428 66 5 0.90008 81 5 0.93161 89 6 0.82345 96 6 0.93161 164 5 0.74667 118 6 0.412026 84 6 0.615152 53 3 0.62500 14 2 0.62647 112 6 0.510026 111 6 0.819778 162 5 0.82754 119 5 0.690761 181 5 0.854113 139 5 0.88640 117 4 0.89107 0.79203 0.87591 0.84493 0.836957 0.90208 0.91058 0.79944 0.88097 0.96540 0.92093 0.96598 0.839239 0.95888 0.90121 0.90191 0.83514 0.80290 0.97283 0.91112 0.88345 0.613334 0.97373 0.969089 0.86812 0.82051 0.85748 0.74849 0.86713 0.94185 0.79500 0.92428 0.74893 0.482916 0.67041 0.713113 0.66970 0.534415 0.845047 0.79008 0.720299 0.881131 0.821390 2 0.89334 0.86882 0.0256102 5 0.89181 0.86531 0.0264981 0.176079 0.9789430 insignificant 1 1 insignificant 0.39691798 0.883250 insignificant 1.00000 1 insignificant 0.0344437 0.3711337 lowCoverage 1 lowCoverage 0.89334 0.59959 0.2935553 6 0.89181 0.593690 0.2981226 4.4734e-23 1.0000e+00 hypermethylated 1.2714e-20 1.0000e+00 hypermethylated 1.3839e-07 9.9995e-01 hypermethylated 3.9662e-05 1.0000e+00 hypermethylated 0.2878491 9.9487e-04 lowCoverage 1.4212e-01 lowCoverage 0.89334 0.841226 0.064723 5 0.89181 0.79657 0.0952418 1.8063e-04 0.9990885 weaklyHypermeth 7.5262e-03 1 weaklyHypermeth 5.5432e-03 0.9846707 weaklyHypermeth 2.6396e-01 1 insignificant 0.061354 1.4860e-01 lowCoverage 1.000000 lowCoverage 0.86882 0.59959 0.278578 5 0.86531 0.593690 0.271625 1.6165e-12 9.9998e-01 hypermethylated 2.3093e-10 1.0000e+00 hypermethylated 8.5185e-07 9.9963e-01 hypermethylated 2.8395e-04 1.00000000 hypermethylated 0.253405 1.2698e-03 lowCoverage 1.5873e-01 lowCoverage 0.86882 0.841226 0.04482082 5 0.86531 0.79657 0.0687438 8.7384e-02 0.9722497 insignificant 1.0000e+00 1 insignificant 1.4608e-01 0.90601 insignificant 1.00000000 1 insignificant 0.02691062 5.8129e-01 lowCoverage 1.000000 lowCoverage 0.59959 0.841226 -0.248211 5 0.593690 0.79657 -0.202881 9.3846e-01 1.9446e-06 hypomethylated 1.0000e+00 2.4637e-04 hypomethylated 9.3630e-01 1.1714e-03 weaklyHypometh 1.0000e+00 1.9523e-01 insignificant -0.226495 3.7314e-03 lowCoverage 4.1460e-01 lowCoverage chr2 60177684 60178684 18169 ENSG00000209301 0.85472 224 5 0.88817 227 5 0.89722 143 5 0.90840 248 4 0.93948 101 5 0.92067 372 5 0.92500 165 5 0.88141 202 5 0.84058 136 5 0.95486 128 5 0.93735 174 5 0.93156 70 5 0.968156 175 5 NA 0 0 0.89233 177 5 0.72018 61 5 0.95556 71 5 0.91984 285 4 0.92500 102 5 0.93950 239 5 0.77470 102 5 0.947192 136 4 0.85541 196 5 0.946667 109 5 0.95583 79 4 0.89377 288 5 0.95000 119 4 0.95833 66 5 0.96518 215 5 0.93844 341 5 0.94560 258 5 0.92237 320 5 0.71175 195 5 0.651056 136 5 0.809375 155 4 0.85714 43 4 0.75387 73 5 0.807447 329 5 0.967627 413 5 0.90574 339 5 0.978464 370 5 0.935486 326 5 0.96602 326 4 0.90133 0.88296 0.89284 0.95495 0.939752 0.92840 0.91608 0.89901 0.86579 0.96172 0.92793 0.95405 0.975217 NA 0.91137 0.81706 0.92929 0.90312 0.92788 0.94625 0.89761 0.921981 0.87492 0.915152 0.94853 0.90626 0.92045 0.92920 0.94953 0.93123 0.95154 0.92679 0.69641 0.642088 0.74540 0.772727 0.75213 0.780787 0.956810 0.95017 0.971972 0.940088 0.960069 4 0.92848 0.93621 -0.0047326 5 0.91075 0.92675 -0.0159946 0.307345 0.2648311 insignificant 1 1 insignificant 0.62478841 0.054297 insignificant 1.00000 1 insignificant -0.0158634 0.4482092 lowCoverage 1 lowCoverage 0.92848 0.77121 0.1521045 5 0.91075 0.748522 0.1622296 1.8802e-12 9.9987e-01 weaklyHypermeth 1.7093e-10 1.0000e+00 weaklyHypermeth 3.8361e-05 9.9690e-01 weaklyHypermeth 2.9107e-03 1.0000e+00 weaklyHypermeth 0.1401544 4.1541e-03 lowCoverage 4.1541e-01 lowCoverage 0.92848 0.962796 -0.027626 5 0.91075 0.94937 -0.0386173 9.0250e-01 0.0287079 weaklyHypometh 1.0000e+00 1 insignificant 7.6842e-01 0.0275606 weaklyHypometh 1.0000e+00 1 insignificant -0.045406 2.9584e-02 lowCoverage 1.000000 lowCoverage 0.93621 0.77121 0.160345 5 0.92675 0.748522 0.178224 3.2442e-11 9.8530e-01 weaklyHypermeth 2.9492e-09 1.0000e+00 weaklyHypermeth 5.9248e-05 9.9650e-01 weaklyHypermeth 8.5472e-03 1.00000000 weaklyHypermeth 0.156018 2.0773e-03 lowCoverage 2.3081e-01 lowCoverage 0.93621 0.962796 -0.02356293 5 0.92675 0.94937 -0.0226227 8.7972e-01 0.0321970 weaklyHypometh 1.0000e+00 1 insignificant 5.4752e-01 0.19850 insignificant 1.00000000 1 insignificant -0.02954218 1.7936e-01 lowCoverage 1.000000 lowCoverage 0.77121 0.962796 -0.184300 5 0.748522 0.94937 -0.200847 9.9874e-01 6.1950e-07 weaklyHypometh 1.0000e+00 1.0325e-04 weaklyHypometh 9.7342e-01 1.2897e-02 weaklyHypometh 1.0000e+00 9.9207e-01 insignificant -0.185560 9.6630e-04 lowCoverage 1.6105e-01 lowCoverage chr2 60295350 60296350 18192 ENSG00000209301 0.30174 104 4 0.35327 179 5 0.48725 103 5 0.43012 84 3 0.41540 87 5 0.60847 170 5 0.43933 85 5 0.53903 137 5 0.35467 104 5 0.44429 111 5 0.70156 184 5 0.42436 45 4 0.392014 213 5 NA 0 0 0.25219 130 5 0.52143 32 4 0.13981 165 5 0.59581 111 3 0.45746 130 5 0.46429 141 5 0.78974 44 4 0.041789 106 3 0.54927 110 5 0.487879 46 4 0.59405 23 3 0.52521 238 5 0.69871 89 5 0.76667 37 5 0.51194 144 5 0.58863 209 5 0.27105 214 5 0.64495 117 5 0.18547 230 5 0.420043 153 5 0.882979 85 2 0.16639 44 3 0.70424 62 4 0.164995 250 5 0.028381 195 5 0.10538 131 5 0.089057 104 3 0.357330 94 3 0.15136 167 5 0.38477 0.35537 0.55781 0.39459 0.373881 0.52826 0.43822 0.46741 0.30623 0.42282 0.66805 0.41508 0.313179 NA 0.20954 0.61037 0.16077 0.42242 0.37150 0.33540 0.69218 0.062845 0.49889 0.506607 0.41259 0.46246 0.61469 0.90977 0.44819 0.50993 0.21274 0.68538 0.14517 0.220771 0.47190 0.098092 0.61656 0.077320 0.049803 0.13810 0.111298 0.166639 0.067116 3 0.43931 0.52651 -0.0958966 5 0.42564 0.52206 -0.0964243 0.998918 0.0049157 weaklyHypometh 1 1 insignificant 0.99963944 0.010923 weaklyHypometh 1.00000 1 insignificant -0.1011300 0.1514933 lowCoverage 1 lowCoverage 0.43931 0.38228 0.0895281 5 0.42564 0.324470 0.1011675 8.0408e-04 9.1437e-01 weaklyHypermeth 2.4366e-02 1.0000e+00 weaklyHypermeth 2.3499e-02 9.5698e-01 weaklyHypermeth 7.3433e-01 1.0000e+00 insignificant 0.0173412 8.9848e-01 lowCoverage 1.0000e+00 lowCoverage 0.43931 0.072359 0.296161 3 0.42564 0.11528 0.3103607 3.0377e-13 1.0000000 lowCoverage 5.0628e-11 1 lowCoverage 1.6736e-08 0.9999582 lowCoverage 4.1839e-06 1 lowCoverage 0.291725 3.1532e-03 lowCoverage 0.262770 lowCoverage 0.52651 0.38228 0.190540 5 0.52206 0.324470 0.197592 5.2632e-04 9.9955e-01 weaklyHypermeth 1.8797e-02 1.0000e+00 weaklyHypermeth 9.2740e-03 9.9279e-01 weaklyHypermeth 3.8642e-01 1.00000000 insignificant 0.118471 4.2427e-01 lowCoverage 1.0000e+00 lowCoverage 0.52651 0.072359 0.36551415 3 0.52206 0.11528 0.4067850 1.0464e-10 1.0000000 lowCoverage 2.6160e-08 1 lowCoverage 2.2910e-07 0.99999 lowCoverage 0.00011455 1 lowCoverage 0.39285457 4.1600e-04 lowCoverage 0.052000 lowCoverage 0.38228 0.072359 0.155088 3 0.324470 0.11528 0.209193 6.1836e-03 9.9852e-01 lowCoverage 4.7566e-01 1.0000e+00 lowCoverage 7.4171e-02 9.9663e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.274383 8.8784e-02 lowCoverage 1.0000e+00 lowCoverage chr2 60295656 60296656 18193 ENSG00000209301 0.30174 104 4 0.35327 179 5 0.48725 103 5 0.43012 84 3 0.41540 87 5 0.60847 170 5 0.43933 85 5 0.53903 137 5 0.35467 104 5 0.44429 111 5 0.70156 184 5 0.42436 45 4 0.392014 213 5 NA 0 0 0.25219 130 5 0.52143 32 4 0.13981 165 5 0.59581 111 3 0.45746 130 5 0.46429 141 5 0.78974 44 4 0.041789 106 3 0.54927 110 5 0.487879 46 4 0.59405 23 3 0.52521 238 5 0.69871 89 5 0.76667 37 5 0.51194 144 5 0.58863 209 5 0.27105 214 5 0.64495 117 5 0.18547 230 5 0.420043 153 5 0.882979 85 2 0.16639 44 3 0.70424 62 4 0.164995 250 5 0.028381 195 5 0.10538 131 5 0.089057 104 3 0.357330 94 3 0.15136 167 5 0.38477 0.35537 0.55781 0.39459 0.373881 0.52826 0.43822 0.46741 0.30623 0.42282 0.66805 0.41508 0.313179 NA 0.20954 0.61037 0.16077 0.42242 0.37150 0.33540 0.69218 0.062845 0.49889 0.506607 0.41259 0.46246 0.61469 0.90977 0.44819 0.50993 0.21274 0.68538 0.14517 0.220771 0.47190 0.098092 0.61656 0.077320 0.049803 0.13810 0.111298 0.166639 0.067116 3 0.43931 0.52651 -0.0958966 5 0.42564 0.52206 -0.0964243 0.998918 0.0049157 weaklyHypometh 1 1 insignificant 0.99963944 0.010923 weaklyHypometh 1.00000 1 insignificant -0.1011300 0.1514933 lowCoverage 1 lowCoverage 0.43931 0.38228 0.0895281 5 0.42564 0.324470 0.1011675 8.0408e-04 9.1437e-01 weaklyHypermeth 2.4366e-02 1.0000e+00 weaklyHypermeth 2.3499e-02 9.5698e-01 weaklyHypermeth 7.3433e-01 1.0000e+00 insignificant 0.0173412 8.9848e-01 lowCoverage 1.0000e+00 lowCoverage 0.43931 0.072359 0.296161 3 0.42564 0.11528 0.3103607 3.0377e-13 1.0000000 lowCoverage 5.0628e-11 1 lowCoverage 1.6736e-08 0.9999582 lowCoverage 4.1839e-06 1 lowCoverage 0.291725 3.1532e-03 lowCoverage 0.262770 lowCoverage 0.52651 0.38228 0.190540 5 0.52206 0.324470 0.197592 5.2632e-04 9.9955e-01 weaklyHypermeth 1.8797e-02 1.0000e+00 weaklyHypermeth 9.2740e-03 9.9279e-01 weaklyHypermeth 3.8642e-01 1.00000000 insignificant 0.118471 4.2427e-01 lowCoverage 1.0000e+00 lowCoverage 0.52651 0.072359 0.36551415 3 0.52206 0.11528 0.4067850 1.0464e-10 1.0000000 lowCoverage 2.6160e-08 1 lowCoverage 2.2910e-07 0.99999 lowCoverage 0.00011455 1 lowCoverage 0.39285457 4.1600e-04 lowCoverage 0.052000 lowCoverage 0.38228 0.072359 0.155088 3 0.324470 0.11528 0.209193 6.1836e-03 9.9852e-01 lowCoverage 4.7566e-01 1.0000e+00 lowCoverage 7.4171e-02 9.9663e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.274383 8.8784e-02 lowCoverage 1.0000e+00 lowCoverage chr2 60346102 60347102 18206 ENSG00000209301 0.65106 337 9 0.68948 226 9 0.48372 121 9 0.71276 179 9 0.72994 73 9 0.68242 378 9 0.67413 154 9 0.55729 162 7 0.60446 91 9 0.57157 123 9 0.64116 232 9 0.63868 81 6 0.673052 161 9 0.50152 37 3 0.66502 117 7 0.54850 76 6 0.62051 76 6 0.76692 230 9 0.71440 165 9 0.71718 317 9 0.73693 43 3 0.781929 49 6 0.72803 188 9 0.706349 46 4 0.73865 85 6 0.54813 187 9 0.70674 66 4 0.63988 31 4 0.69872 165 9 0.64846 297 9 0.69437 263 9 0.62055 338 9 0.58729 159 7 0.615880 133 9 0.538526 180 9 0.52698 71 6 0.67325 82 5 0.630416 209 9 0.658270 221 9 0.72120 248 9 0.651400 225 9 0.628814 183 8 0.68619 265 9 0.74829 0.76392 0.57832 0.82472 0.829688 0.76381 0.69580 0.67062 0.76669 0.76596 0.80408 0.77253 0.810222 0.64050 0.77126 0.71845 0.77279 0.81222 0.76172 0.80178 0.80613 0.816658 0.76138 0.808333 0.82142 0.74743 0.73864 0.79237 0.77673 0.74781 0.77100 0.76720 0.72139 0.692686 0.66403 0.700228 0.76674 0.690166 0.782376 0.82844 0.755358 0.760668 0.794061 4 0.70084 0.72851 -0.0126455 9 0.66990 0.61270 0.0571981 0.884471 0.3955839 insignificant 1 1 insignificant 0.46823543 0.037779 weaklyHypometh 1.00000 1 insignificant -0.0452058 0.0836132 insignificant 1 insignificant 0.70024 0.65827 0.0561177 9 0.62087 0.554540 0.0663277 6.8505e-03 9.9939e-01 weaklyHypermeth 1.9573e-01 1.0000e+00 insignificant 4.7216e-02 9.9809e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0467977 1.2982e-01 insignificant 1.0000e+00 insignificant 0.70099 0.699650 -0.014194 9 0.66763 0.67772 -0.0100915 7.5991e-01 0.2865877 insignificant 1.0000e+00 1 insignificant 8.4694e-01 0.2176254 insignificant 1.0000e+00 1 insignificant -0.026986 2.6872e-01 insignificant 1.000000 insignificant 0.72904 0.65827 0.067237 9 0.64651 0.554540 0.091970 5.2156e-04 9.9999e-01 weaklyHypermeth 1.8797e-02 1.0000e+00 weaklyHypermeth 2.0032e-03 1.0000e+00 weaklyHypermeth 1.1129e-01 1.00000000 insignificant 0.092004 9.0680e-03 weaklyHypermeth 7.2934e-01 insignificant 0.72971 0.699650 0.00011950 9 0.68131 0.67772 0.0035854 2.4046e-01 0.2149439 insignificant 1.0000e+00 1 insignificant 3.6428e-01 0.58068 insignificant 1.00000000 1 insignificant 0.01822021 4.6559e-01 insignificant 1.000000 insignificant 0.65906 0.699650 -0.069352 9 0.616155 0.67772 -0.061567 9.9377e-01 3.1710e-03 weaklyHypometh 1.0000e+00 1.9819e-01 insignificant 9.9968e-01 1.9108e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.073783 2.7781e-02 weaklyHypometh 1.0000e+00 insignificant chr2 60444869 60445869 18233 ENSG00000209301 0.72040 204 5 0.85744 106 4 0.92333 55 4 0.85923 225 7 0.78889 48 4 0.93465 247 5 0.91515 40 4 0.89048 94 5 0.82520 73 4 0.88000 36 3 0.87963 121 5 0.96000 23 2 0.921701 99 4 0.99310 55 4 0.94087 80 4 0.83333 17 1 0.72917 13 0 0.68247 237 2 0.75303 54 1 0.91108 184 5 0.66667 14 1 0.406250 50 4 0.83500 53 3 0.833333 24 1 0.93750 18 1 0.84190 148 5 0.72846 31 3 0.85266 36 3 0.91503 62 2 0.95681 140 5 0.94598 120 5 0.86736 192 5 0.37881 101 5 0.113636 25 1 1.000000 41 1 0.00000 1 0 0.42032 109 4 0.107901 100 3 0.515776 147 2 0.41153 152 2 0.417910 76 1 0.247500 87 1 0.51021 177 4 0.82321 0.84710 0.91263 0.88546 0.914875 0.90311 0.90420 0.91897 0.78232 0.88387 0.92055 0.98387 0.826388 0.97386 0.84362 0.94624 0.74328 0.73351 0.85423 0.87883 0.83871 0.300403 0.77419 0.932796 0.81048 0.88593 0.68207 0.86089 0.89712 0.94234 0.91060 0.85750 0.31599 0.234115 0.81989 0.061828 0.29430 0.144464 0.366867 0.36841 0.589793 0.369556 0.441950 1 0.85579 0.83784 0.0203171 5 0.86693 0.87516 -0.0082291 0.469341 0.2598017 insignificant 1 1 insignificant 0.50263243 0.933345 insignificant 1.00000 1 insignificant 0.0443778 0.3768458 lowCoverage 1 lowCoverage 0.85579 0.34309 0.5160916 3 0.86693 0.515234 0.3516980 5.0855e-23 9.9884e-01 lowCoverage 1.2714e-20 1.0000e+00 lowCoverage 1.5184e-06 9.9999e-01 lowCoverage 1.8979e-04 1.0000e+00 lowCoverage 0.5231791 1.6603e-02 lowCoverage 1.0000e+00 lowCoverage 0.85579 0.449139 0.414434 2 0.86693 0.47515 0.3917861 2.5676e-22 0.9999984 lowCoverage 2.5676e-19 1 lowCoverage 3.6956e-08 0.9999999 lowCoverage 6.2076e-06 1 lowCoverage 0.439372 2.8231e-04 lowCoverage 0.031367 lowCoverage 0.83784 0.34309 0.497624 3 0.87516 0.515234 0.359927 2.1367e-13 1.0000e+00 lowCoverage 4.2733e-11 1.0000e+00 lowCoverage 5.9830e-05 1.0000e+00 lowCoverage 8.5472e-03 1.00000000 lowCoverage 0.478801 2.1982e-02 lowCoverage 1.0000e+00 lowCoverage 0.83784 0.449139 0.41136219 2 0.87516 0.47515 0.4000152 1.8713e-14 1.0000000 lowCoverage 1.8713e-11 1 lowCoverage 1.6529e-06 1.00000 lowCoverage 0.00053888 1 lowCoverage 0.39499375 9.7292e-05 lowCoverage 0.024323 lowCoverage 0.34309 0.449139 -0.089440 1 0.515234 0.47515 0.040088 7.5596e-01 4.9782e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9917e-01 6.4681e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.083808 6.1148e-01 lowCoverage 1.0000e+00 lowCoverage chr2 60533294 60534294 18252 ENSG00000200807 0.31990 258 6 0.23240 272 6 0.45954 219 6 0.31828 231 6 0.12446 110 6 0.46882 322 6 0.49842 228 6 0.42048 243 6 0.28778 356 6 0.47938 351 6 0.53695 178 6 0.28279 285 6 0.066154 406 6 0.44076 199 5 0.20979 487 6 0.46043 266 6 0.16951 170 6 0.33998 293 5 0.18463 181 6 0.19667 193 6 0.49861 58 5 0.074346 180 6 0.32695 194 6 0.258082 146 6 0.31376 127 5 0.27017 310 6 0.14764 213 6 0.33949 156 6 0.27360 165 6 0.21362 334 6 0.30556 329 6 0.34204 279 6 0.52213 239 6 0.543476 141 6 0.916667 124 5 0.46401 59 6 0.41647 161 6 0.518497 251 6 0.118300 332 6 0.13793 263 6 0.144099 240 5 0.096674 229 6 0.13433 245 6 0.29015 0.22714 0.46063 0.24379 0.098236 0.52642 0.47189 0.39034 0.27366 0.44727 0.52587 0.28357 0.065676 0.44699 0.21588 0.39246 0.14546 0.32192 0.15025 0.17204 0.55219 0.052972 0.33205 0.303739 0.35574 0.30447 0.19872 0.35500 0.28852 0.19010 0.30237 0.27823 0.66859 0.528046 0.97661 0.494128 0.49600 0.616075 0.081345 0.13670 0.085683 0.096198 0.132337 5 0.31383 0.27379 0.0403993 6 0.30919 0.20849 0.1006972 0.236580 0.9997257 insignificant 1 1 insignificant 0.21510745 0.983412 insignificant 1.00000 1 insignificant 0.0445325 0.3177305 insignificant 1 insignificant 0.31389 0.62872 -0.3144537 6 0.35336 0.494093 -0.1407347 9.8055e-01 7.6979e-13 hypomethylated 1.0000e+00 1.9245e-10 hypomethylated 8.5337e-01 2.3008e-06 hypomethylated 1.0000e+00 5.7519e-04 hypomethylated -0.2386859 2.0121e-02 weaklyHypometh 1.0000e+00 insignificant 0.31382 0.107716 0.203678 6 0.32892 0.12522 0.2036966 1.4210e-07 0.9999999 hypermethylated 1.5789e-05 1 hypermethylated 4.3453e-08 1.0000000 hypermethylated 6.2076e-06 1 hypermethylated 0.198588 4.0980e-06 weaklyHypermeth 0.001366 weaklyHypermeth 0.27401 0.62872 -0.354841 6 0.23828 0.494093 -0.255817 9.9986e-01 3.3613e-13 hypomethylated 1.0000e+00 8.4033e-11 hypomethylated 9.9949e-01 3.9524e-07 hypomethylated 1.0000e+00 0.00013175 hypomethylated -0.283218 9.4815e-03 weaklyHypometh 7.2934e-01 insignificant 0.27423 0.107716 0.16496115 6 0.27799 0.12522 0.1527670 1.7514e-07 0.9999893 weaklyHypermeth 1.7514e-05 1 weaklyHypermeth 4.0962e-06 0.99995 weaklyHypermeth 0.00068271 1 weaklyHypermeth 0.15405586 3.5437e-04 weaklyHypermeth 0.052000 weaklyHypermeth 0.62936 0.107716 0.522815 6 0.576442 0.12522 0.451220 2.3073e-12 1.0000e+00 hypermethylated 4.6146e-10 1.0000e+00 hypermethylated 1.7211e-08 1.0000e+00 hypermethylated 8.6056e-06 1.0000e+00 hypermethylated 0.437274 1.7606e-03 weaklyHypermeth 2.2007e-01 insignificant chr2 60533546 60534546 18253 ENSG00000200807 0.31990 258 6 0.23240 272 6 0.45954 219 6 0.31828 231 6 0.12446 110 6 0.46882 322 6 0.49842 228 6 0.42048 243 6 0.28778 356 6 0.47938 351 6 0.53695 178 6 0.28279 285 6 0.066154 406 6 0.44076 199 5 0.20979 487 6 0.46043 266 6 0.16951 170 6 0.33998 293 5 0.18463 181 6 0.19667 193 6 0.49861 58 5 0.074346 180 6 0.32695 194 6 0.258082 146 6 0.31376 127 5 0.27017 310 6 0.14764 213 6 0.33949 156 6 0.27360 165 6 0.21362 334 6 0.30556 329 6 0.34204 279 6 0.52213 239 6 0.543476 141 6 0.916667 124 5 0.46401 59 6 0.41647 161 6 0.518497 251 6 0.118300 332 6 0.13793 263 6 0.144099 240 5 0.096674 229 6 0.13433 245 6 0.29015 0.22714 0.46063 0.24379 0.098236 0.52642 0.47189 0.39034 0.27366 0.44727 0.52587 0.28357 0.065676 0.44699 0.21588 0.39246 0.14546 0.32192 0.15025 0.17204 0.55219 0.052972 0.33205 0.303739 0.35574 0.30447 0.19872 0.35500 0.28852 0.19010 0.30237 0.27823 0.66859 0.528046 0.97661 0.494128 0.49600 0.616075 0.081345 0.13670 0.085683 0.096198 0.132337 5 0.31383 0.27379 0.0403993 6 0.30919 0.20849 0.1006972 0.236580 0.9997257 insignificant 1 1 insignificant 0.21510745 0.983412 insignificant 1.00000 1 insignificant 0.0445325 0.3177305 insignificant 1 insignificant 0.31389 0.62872 -0.3144537 6 0.35336 0.494093 -0.1407347 9.8055e-01 7.6979e-13 hypomethylated 1.0000e+00 1.9245e-10 hypomethylated 8.5337e-01 2.3008e-06 hypomethylated 1.0000e+00 5.7519e-04 hypomethylated -0.2386859 2.0121e-02 weaklyHypometh 1.0000e+00 insignificant 0.31382 0.107716 0.203678 6 0.32892 0.12522 0.2036966 1.4210e-07 0.9999999 hypermethylated 1.5789e-05 1 hypermethylated 4.3453e-08 1.0000000 hypermethylated 6.2076e-06 1 hypermethylated 0.198588 4.0980e-06 weaklyHypermeth 0.001366 weaklyHypermeth 0.27401 0.62872 -0.354841 6 0.23828 0.494093 -0.255817 9.9986e-01 3.3613e-13 hypomethylated 1.0000e+00 8.4033e-11 hypomethylated 9.9949e-01 3.9524e-07 hypomethylated 1.0000e+00 0.00013175 hypomethylated -0.283218 9.4815e-03 weaklyHypometh 7.2934e-01 insignificant 0.27423 0.107716 0.16496115 6 0.27799 0.12522 0.1527670 1.7514e-07 0.9999893 weaklyHypermeth 1.7514e-05 1 weaklyHypermeth 4.0962e-06 0.99995 weaklyHypermeth 0.00068271 1 weaklyHypermeth 0.15405586 3.5437e-04 weaklyHypermeth 0.052000 weaklyHypermeth 0.62936 0.107716 0.522815 6 0.576442 0.12522 0.451220 2.3073e-12 1.0000e+00 hypermethylated 4.6146e-10 1.0000e+00 hypermethylated 1.7211e-08 1.0000e+00 hypermethylated 8.6056e-06 1.0000e+00 hypermethylated 0.437274 1.7606e-03 weaklyHypermeth 2.2007e-01 insignificant chr2 60568617 60569617 18270 ENSG00000200807 0.71741 103 6 0.66137 150 6 0.67652 144 6 0.64359 65 6 0.69151 96 6 0.65280 175 6 0.71517 197 6 0.68605 95 6 0.66508 88 6 0.69883 81 6 0.72082 259 6 0.64751 110 4 0.763852 95 6 NA 0 0 0.77129 141 6 0.78961 137 6 0.71074 135 6 0.69097 75 4 0.64521 155 6 0.65906 172 6 0.69097 91 6 0.666667 66 6 0.72929 103 6 0.727192 74 6 0.70000 21 3 0.73737 137 6 0.70119 91 6 0.66832 75 6 0.70972 95 6 0.64807 188 6 0.71072 185 6 0.73568 291 6 0.59233 143 6 0.494758 93 4 0.387738 78 4 0.57778 21 2 0.67895 86 6 0.585984 229 6 0.704186 81 6 0.80435 100 6 0.651515 48 4 0.725926 42 4 0.83333 45 4 0.58274 0.54160 0.53538 0.52909 0.585326 0.52634 0.60023 0.54975 0.59271 0.60065 0.65215 0.53510 0.660940 NA 0.66948 0.68919 0.62716 0.55552 0.56525 0.58734 0.54712 0.507834 0.64540 0.619016 0.55484 0.61067 0.63193 0.58737 0.56701 0.54011 0.58750 0.63564 0.47695 0.411630 0.45231 0.499693 0.61839 0.499443 0.660524 0.70888 0.490155 0.659703 0.746544 4 0.61787 0.61609 0.0034528 6 0.69397 0.70150 -0.0075218 0.355749 0.0150769 inconclusive 1 1 insignificant 0.45822780 0.067057 insignificant 1.00000 1 insignificant -0.0069731 0.5977517 insignificant 1 insignificant 0.61787 0.50000 0.1000130 6 0.69397 0.583965 0.1100094 4.7585e-08 9.9980e-01 weaklyHypermeth 2.5226e-06 1.0000e+00 weaklyHypermeth 2.5264e-06 9.9994e-01 weaklyHypermeth 2.8071e-04 1.0000e+00 weaklyHypermeth 0.1422029 1.6273e-02 lowCoverage 1.0000e+00 lowCoverage 0.61787 0.680380 -0.062966 5 0.69397 0.74554 -0.0515683 9.2709e-01 0.0034975 weaklyHypometh 1.0000e+00 1 insignificant 9.1211e-01 0.0085049 weaklyHypometh 1.0000e+00 1 insignificant -0.048735 2.2215e-01 lowCoverage 1.000000 lowCoverage 0.61609 0.50000 0.093619 6 0.70150 0.583965 0.117531 7.6540e-08 9.7590e-01 weaklyHypermeth 5.4671e-06 1.0000e+00 weaklyHypermeth 1.0256e-05 9.7060e-01 weaklyHypermeth 2.5641e-03 1.00000000 weaklyHypermeth 0.149176 1.3714e-02 lowCoverage 9.1427e-01 lowCoverage 0.61609 0.680380 -0.06268502 5 0.70150 0.74554 -0.0440465 7.4475e-01 0.0078055 weaklyHypometh 1.0000e+00 1 insignificant 8.3133e-01 0.11051 insignificant 1.00000000 1 insignificant -0.04176214 2.8283e-01 lowCoverage 1.000000 lowCoverage 0.50000 0.680380 -0.164157 5 0.583965 0.74554 -0.161578 1.0000e+00 3.2905e-06 weaklyHypometh 1.0000e+00 2.9914e-04 weaklyHypometh 1.0000e+00 1.7424e-04 weaklyHypometh 1.0000e+00 5.8079e-02 weaklyHypometh -0.190938 5.5503e-03 lowCoverage 4.2695e-01 lowCoverage chr2 60612333 60613333 18287 ENSG00000200807 0.34524 210 4 0.13464 197 5 0.24000 45 5 0.16143 121 5 0.26333 53 3 0.30185 194 5 0.17020 69 5 0.21026 137 5 0.12500 56 3 0.11111 18 3 0.17573 230 5 0.20000 14 0 0.219524 68 3 0.30444 33 3 0.00000 63 3 0.00000 18 0 NA 0 0 0.22372 357 3 0.13235 171 5 0.15776 150 5 0.28000 42 5 NA 0 0 0.28924 80 5 0.134545 40 5 0.22857 45 3 0.21333 191 5 0.14563 68 5 0.33036 15 2 0.18319 115 5 0.12334 206 5 0.12897 223 5 0.28624 97 5 0.72412 81 5 0.665085 136 5 0.958333 72 2 NA 0 0 0.66786 29 3 0.868730 217 5 0.112594 240 5 0.26486 155 5 0.087119 200 5 0.108116 361 5 0.10588 178 5 0.34524 0.13464 0.24000 0.16143 0.263333 0.30185 0.17020 0.21026 0.12500 0.22175 0.17573 0.20000 0.219524 0.30444 0.15509 0.00000 NA 0.26847 0.13235 0.15776 0.28000 NA 0.28924 0.134545 0.22857 0.21333 0.14563 0.16786 0.18319 0.12334 0.12897 0.28624 0.72412 0.665085 0.87687 NA 0.66786 0.868730 0.112594 0.26486 0.087119 0.108116 0.105881 0 0.14227 0.13904 0.0406794 5 0.20873 0.17771 0.0310172 0.111176 0.9643229 insignificant 1 1 insignificant 0.64714065 0.732338 insignificant 1.00000 1 insignificant -0.0300607 0.3396623 lowCoverage 1 lowCoverage 0.14227 0.84299 -0.6932523 5 0.20873 0.830735 -0.6220098 1.0000e+00 6.0999e-32 hypomethylated 1.0000e+00 6.0999e-29 hypomethylated 1.0000e+00 1.8742e-08 hypomethylated 1.0000e+00 9.3712e-06 hypomethylated -0.5938473 1.9625e-04 lowCoverage 3.9251e-02 lowCoverage 0.14227 0.072310 0.060919 5 0.20873 0.13010 0.0786255 8.7088e-03 0.9990312 weaklyHypermeth 3.1103e-01 1 insignificant 1.6439e-01 0.4803435 insignificant 1.0000e+00 1 insignificant 0.047265 2.5856e-01 lowCoverage 1.000000 lowCoverage 0.13904 0.84299 -0.699259 5 0.17771 0.830735 -0.653027 1.0000e+00 4.5013e-26 hypomethylated 1.0000e+00 4.5013e-23 hypomethylated 1.0000e+00 7.5750e-07 hypomethylated 1.0000e+00 0.00018937 hypomethylated -0.563787 2.2339e-04 lowCoverage 4.4678e-02 lowCoverage 0.13904 0.072310 0.03110022 5 0.17771 0.13010 0.0476083 1.2530e-01 0.2813431 insignificant 1.0000e+00 1 insignificant 9.9392e-02 0.31755 insignificant 1.00000000 1 insignificant 0.07732622 8.6888e-02 lowCoverage 1.000000 lowCoverage 0.84299 0.072310 0.740126 5 0.830735 0.13010 0.700635 1.1768e-16 1.0000e+00 hypermethylated 1.1768e-13 1.0000e+00 hypermethylated 7.1202e-06 1.0000e+00 hypermethylated 1.4363e-03 1.0000e+00 hypermethylated 0.641113 5.7497e-05 lowCoverage 1.4374e-02 lowCoverage chr2 60651071 60652071 18315 BCL11A ENSG00000119866 0.33757 237 6 0.24877 487 7 0.26464 357 7 0.32215 307 5 0.32552 195 7 0.25748 433 7 0.34519 283 7 0.36197 274 7 0.21270 334 7 0.24951 165 7 0.25371 483 7 0.23883 181 7 0.170361 227 7 0.39540 155 5 0.19222 285 7 0.30924 148 7 0.39191 78 2 0.26671 289 5 0.18973 334 7 0.22715 267 5 0.20412 81 7 0.119048 45 5 0.32002 208 7 0.078689 158 6 0.25000 32 3 0.26601 459 7 0.15978 192 7 0.23182 65 6 0.18796 252 7 0.20857 584 7 0.19691 375 7 0.21296 319 7 0.25211 309 7 0.363326 81 7 0.573972 185 4 0.00000 9 0 0.25386 249 6 0.269188 365 7 0.320196 200 5 0.16902 167 5 0.155742 150 5 0.164533 146 5 0.32521 153 5 0.37935 0.24385 0.32422 0.33807 0.329411 0.25490 0.37479 0.40198 0.22493 0.25707 0.28696 0.27933 0.201427 0.35846 0.22156 0.33857 0.59288 0.23170 0.19143 0.22112 0.24660 0.137443 0.34299 0.092398 0.24404 0.30368 0.19634 0.29110 0.20066 0.23438 0.23566 0.21738 0.29198 0.347072 0.37093 0.121960 0.21086 0.253397 0.276146 0.13540 0.146585 0.194826 0.296839 4 0.25566 0.23105 0.0405027 7 0.22575 0.19291 0.0328402 0.023137 0.9999184 weaklyHypermeth 1 1 insignificant 0.00046181 0.999999 weaklyHypermeth 0.46181 1 insignificant 0.0750479 0.0043505 weaklyHypermeth 1 insignificant 0.25571 0.33723 -0.0276703 7 0.25800 0.296408 -0.0384087 4.0719e-03 2.9530e-04 weaklyHypometh 1.1976e-01 3.6913e-02 weaklyHypometh 1.3876e-02 3.4782e-01 inconclusive 4.7847e-01 1.0000e+00 insignificant -0.0073716 9.2760e-01 insignificant 1.0000e+00 insignificant 0.25566 0.172794 0.089288 5 0.22575 0.21042 0.0153313 1.3125e-04 0.0759226 weaklyHypermeth 5.7067e-03 1 weaklyHypermeth 3.1333e-04 0.8903584 weaklyHypermeth 2.6111e-02 1 weaklyHypermeth 0.051096 2.7503e-01 insignificant 1.000000 insignificant 0.23146 0.33723 -0.076500 7 0.22047 0.296408 -0.075940 2.7536e-01 2.0389e-03 weaklyHypometh 1.0000e+00 2.0389e-01 insignificant 5.1122e-01 1.7526e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.082419 3.3525e-01 insignificant 1.0000e+00 insignificant 0.23105 0.172794 0.04702183 5 0.19291 0.21042 -0.0175088 5.0380e-02 0.0503847 insignificant 1.0000e+00 1 insignificant 1.6947e-01 0.21237 insignificant 1.00000000 1 insignificant -0.02395150 6.0081e-01 insignificant 1.000000 insignificant 0.33723 0.173006 0.049784 5 0.296408 0.24048 0.055930 5.3782e-02 3.3596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0947e-01 6.3193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.058468 5.1490e-01 insignificant 1.0000e+00 insignificant chr2 62555721 62556721 18393 ENSG00000209133 0.82909 252 9 0.72035 211 9 0.79842 184 9 0.86859 221 7 0.78418 104 8 0.90856 283 9 0.81323 183 9 0.84592 164 9 0.81810 171 9 0.83731 191 9 0.88324 320 9 0.73254 142 9 0.767715 244 9 0.85968 89 4 0.82739 270 9 0.79410 117 9 0.64666 114 8 0.80330 256 9 0.81561 205 9 0.88698 214 9 0.78325 89 8 0.687083 130 7 0.89523 268 9 0.905684 119 9 0.86558 116 4 0.80338 156 9 0.87853 141 9 0.69896 139 9 0.82644 171 9 0.88603 259 9 0.82467 217 9 0.89131 338 9 0.13168 245 9 0.056472 218 9 0.078845 321 9 0.10628 91 8 0.18404 181 8 0.039581 355 9 0.772389 286 9 0.81044 237 9 0.829256 251 9 0.784536 226 9 0.67919 228 9 0.83075 0.71161 0.79712 0.85506 0.766205 0.91102 0.81489 0.82963 0.79009 0.82530 0.88243 0.67804 0.733256 0.85729 0.83721 0.78309 0.61576 0.88798 0.82262 0.84269 0.78408 0.638550 0.90071 0.890253 0.85557 0.75789 0.83792 0.77031 0.81252 0.85511 0.81481 0.87012 0.12162 0.053785 0.11069 0.084280 0.15502 0.038739 0.710231 0.80721 0.810597 0.736889 0.660404 7 0.81830 0.83294 -0.0155347 9 0.77800 0.81085 -0.0328525 0.911131 0.0654335 insignificant 1 1 insignificant 0.87214190 0.055508 insignificant 1.00000 1 insignificant -0.0167975 0.5190632 insignificant 1 insignificant 0.81883 0.08292 0.7370768 9 0.82000 0.082047 0.7379490 5.7938e-111 1.0000e+00 hypermethylated 5.7938e-108 1.0000e+00 hypermethylated 6.8454e-26 1.0000e+00 hypermethylated 6.8454e-23 1.0000e+00 hypermethylated 0.7125635 2.0238e-10 hypermethylated 1.0119e-07 hypermethylated 0.81830 0.736971 0.072482 9 0.77800 0.78663 -0.0086299 1.7793e-05 0.8507336 weaklyHypermeth 1.3687e-03 1 weaklyHypermeth 3.5494e-03 0.8429422 weaklyHypermeth 1.7747e-01 1 insignificant 0.036885 2.5338e-01 insignificant 1.000000 insignificant 0.83326 0.08292 0.750146 9 0.84539 0.082047 0.763341 1.5867e-79 1.0000e+00 hypermethylated 1.5867e-76 1.0000e+00 hypermethylated 1.0111e-20 1.0000e+00 hypermethylated 1.0111e-17 1.00000000 hypermethylated 0.729361 1.5369e-12 hypermethylated 1.5369e-09 hypermethylated 0.83294 0.736971 0.08474979 9 0.81085 0.78663 0.0242226 1.7086e-05 0.9969728 weaklyHypermeth 1.4238e-03 1 weaklyHypermeth 5.8463e-03 0.99163 weaklyHypermeth 0.32488958 1 insignificant 0.05368217 1.4324e-01 insignificant 1.000000 insignificant 0.08292 0.736756 -0.659632 9 0.082047 0.76292 -0.680871 1.0000e+00 1.0891e-47 hypomethylated 1.0000e+00 1.0891e-44 hypomethylated 1.0000e+00 4.0639e-14 hypomethylated 1.0000e+00 4.0639e-11 hypomethylated -0.675679 2.6159e-08 hypomethylated 2.6159e-05 hypomethylated chr2 65463959 65464959 18590 ACTR2 ENSG00000138071 0.95658 282 5 0.57272 304 6 0.63568 120 5 0.94298 198 5 0.90130 69 5 0.93100 416 5 0.82095 74 5 0.86810 212 5 0.68896 86 5 0.89758 109 4 0.85347 299 5 0.78095 29 4 0.846528 145 5 0.71578 93 4 0.92841 118 5 1.00000 20 1 NA 0 0 0.75430 194 5 0.88888 371 5 0.90059 385 5 0.77143 118 5 0.137500 20 1 0.88249 170 5 0.834848 88 5 0.96154 16 1 0.92355 298 5 0.83562 209 5 0.89316 44 3 0.87133 336 5 0.75137 260 6 0.72915 248 6 0.92079 380 5 0.29127 275 5 0.586729 254 5 0.715810 276 4 NA 0 0 0.50281 203 6 0.384062 402 5 0.935903 179 5 0.90347 300 5 0.905806 192 5 0.770957 127 4 0.77382 165 5 0.93307 0.57204 0.64525 0.93096 0.882165 0.91307 0.84806 0.84018 0.74785 0.93098 0.89438 0.81714 0.787454 0.87618 0.91417 0.98704 NA 0.68364 0.86047 0.88600 0.76333 0.330000 0.91383 0.934061 0.90843 0.88587 0.82179 0.90598 0.81052 0.83416 0.77316 0.89029 0.29103 0.804201 0.59075 NA 0.50663 0.390832 0.930654 0.88864 0.901222 0.795924 0.949332 1 0.84336 0.85963 -0.0168681 5 0.79436 0.81193 -0.0175766 0.936229 0.2792585 insignificant 1 1 insignificant 0.54547311 0.857366 insignificant 1.00000 1 insignificant 0.0433098 0.5366367 lowCoverage 1 lowCoverage 0.84336 0.50922 0.3332510 5 0.79436 0.463217 0.3311415 1.1925e-17 9.9999e-01 hypermethylated 1.9876e-15 1.0000e+00 hypermethylated 7.9480e-06 1.0000e+00 hypermethylated 7.9480e-04 1.0000e+00 hypermethylated 0.3399033 7.5139e-03 lowCoverage 6.8308e-01 lowCoverage 0.84336 0.896158 -0.051886 5 0.79436 0.88719 -0.0928336 9.9441e-01 0.0442092 weaklyHypometh 1.0000e+00 1 insignificant 9.3294e-01 0.2339291 insignificant 1.0000e+00 1 insignificant -0.021950 6.3198e-01 lowCoverage 1.000000 lowCoverage 0.85963 0.50922 0.363922 5 0.81193 0.463217 0.348718 5.9786e-16 9.9998e-01 hypermethylated 1.9929e-13 1.0000e+00 hypermethylated 4.7544e-04 9.9996e-01 hypermethylated 4.3222e-02 1.00000000 hypermethylated 0.296593 1.2600e-02 lowCoverage 8.9999e-01 lowCoverage 0.85963 0.896158 -0.03628351 5 0.81193 0.88719 -0.0752570 9.2234e-01 0.0545555 insignificant 1.0000e+00 1 insignificant 9.2280e-01 0.17759 insignificant 1.00000000 1 insignificant -0.06525980 3.8139e-01 lowCoverage 1.000000 lowCoverage 0.50922 0.896158 -0.371848 5 0.463217 0.88719 -0.423975 1.0000e+00 1.7173e-10 hypomethylated 1.0000e+00 5.7243e-08 hypomethylated 1.0000e+00 2.6235e-04 hypomethylated 1.0000e+00 6.5588e-02 hypomethylated -0.361853 5.1934e-03 lowCoverage 4.2695e-01 lowCoverage chr2 66984177 66985177 18990 MEIS1 ENSG00000143995 0.93885 113 5 0.89380 198 5 0.92954 165 5 0.91000 15 1 0.95097 70 5 0.92088 71 5 0.94534 199 5 0.94282 170 5 0.92968 184 5 0.98556 178 5 0.94981 150 5 0.96917 137 5 0.956599 157 5 NA 0 0 0.96896 165 5 0.93242 102 5 0.96800 104 5 1.00000 22 3 0.97893 179 5 0.97143 90 5 0.98462 37 5 1.000000 6 0 0.98462 95 5 0.921524 62 5 NA 0 0 0.93009 119 5 0.95128 43 4 0.91745 55 5 0.94807 172 5 0.96952 219 5 1.00000 113 5 0.96009 166 5 0.94889 206 5 0.875455 131 5 1.000000 233 5 NA 0 0 0.96919 95 5 0.921718 227 5 0.932557 117 5 0.98750 181 5 0.966667 29 3 0.930254 99 5 0.98889 54 5 0.94992 0.91681 0.92402 0.86169 0.957580 0.89376 0.94647 0.94930 0.93500 0.98911 0.95734 0.96699 0.965774 NA 0.95809 0.92633 0.96156 1.00000 0.98424 0.96846 0.97303 0.994926 0.98402 0.887353 NA 0.94957 0.95788 0.89185 0.93991 0.96871 1.00000 0.95592 0.96797 0.828394 1.00000 NA 0.96417 0.908202 0.953643 0.98295 0.954545 0.911071 0.980519 1 0.95180 0.95676 -0.0056621 5 0.95026 0.96003 -0.0097735 0.713561 0.0753806 insignificant 1 1 insignificant 0.85127686 0.047285 weaklyHypometh 1.00000 1 insignificant -0.0110390 0.3245279 lowCoverage 1 lowCoverage 0.95180 0.94283 0.0058318 5 0.95026 0.947359 0.0029018 5.4935e-01 5.3894e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1898e-01 7.9547e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0065695 7.7875e-01 lowCoverage 1.0000e+00 lowCoverage 0.95180 0.962500 -0.010179 5 0.95026 0.96353 -0.0132683 8.3232e-01 0.0221650 weaklyHypometh 1.0000e+00 1 insignificant 9.2485e-01 0.0431384 weaklyHypometh 1.0000e+00 1 insignificant -0.011554 4.4677e-01 lowCoverage 1.000000 lowCoverage 0.95676 0.94283 0.015746 5 0.96003 0.947359 0.012675 3.7630e-01 1.0853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5192e-01 2.3843e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.017608 4.7595e-01 lowCoverage 1.0000e+00 lowCoverage 0.95676 0.962500 -0.00459444 5 0.96003 0.96353 -0.0034948 3.8246e-01 0.0596375 insignificant 1.0000e+00 1 insignificant 4.5122e-01 0.12410 insignificant 1.00000000 1 insignificant -0.00051515 9.7450e-01 lowCoverage 1.000000 lowCoverage 0.94283 0.962500 -0.011512 5 0.947359 0.96353 -0.016170 5.9042e-01 3.2045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5420e-01 4.5431e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.018124 4.8930e-01 lowCoverage 1.0000e+00 lowCoverage chr2 71672572 71673572 19328 DYSF ENSG00000135636 0.90833 295 5 0.84128 242 6 0.78225 291 6 0.92677 186 5 0.87812 85 5 0.89169 302 5 0.84246 171 5 0.86622 173 5 0.88141 181 5 0.95073 143 5 0.90315 232 5 0.87995 115 5 0.90269 197 5 NA 0 0 0.88725 162 5 0.96429 80 5 0.81567 128 5 0.67507 238 5 0.88278 131 5 0.89951 285 5 0.92301 137 5 0.76791 97 5 0.92559 192 5 0.87688 130 5 0.91107 77 5 0.88103 268 6 0.83706 112 5 0.97778 104 5 0.90665 150 5 0.89466 226 6 0.86794 263 5 0.91354 374 5 0.6495797 258 6 0.7418685 166 5 0.6546268 63 4 0.64774 75 3 0.862504 139 5 0.514220 270 6 0.78376 336 5 0.89466 311 5 0.72694 201 5 0.69241 281 5 0.84115 311 5 0.88417 0.84491 0.74694 0.89654 0.86724 0.89708 0.83171 0.83210 0.85912 0.93251 0.88746 0.84295 0.88262 NA 0.86286 0.94515 0.82832 0.79433 0.87289 0.87765 0.88720 0.71542 0.91268 0.90781 0.90442 0.87191 0.84748 0.96440 0.88735 0.90168 0.89344 0.90289 0.6186779 0.7015798 0.628081 0.57264 0.841551 0.551991 0.87055 0.84186 0.75760 0.79399 0.85601 5 0.86445 0.89296 -0.0301667 5 0.85498 0.88602 -0.03104438 0.785672 0.0288576 weaklyHypometh 1 1 insignificant 0.78032 0.0526853 insignificant 1 1 insignificant -0.0176469 0.40944 lowCoverage 1 lowCoverage 0.86445 0.5880536 0.259031 5 0.85498 0.6187573 0.236219 8.0781e-11 0.99999 hypermethylated 5.7701e-09 1 hypermethylated 5.6113e-04 0.98682 hypermethylated 3.7408e-02 1 hypermethylated 0.194189 7.8231e-03 lowCoverage 4.6018e-01 lowCoverage 0.86445 0.83958 0.031471 5 0.85498 0.77980 0.07517969 1.2727e-02 0.593910 weaklyHypermeth 7.4866e-01 1 insignificant 3.1865e-02 0.650670 weaklyHypermeth 1.000e+00 1 insignificant 0.0848276 8.1689e-02 lowCoverage 1.000000 lowCoverage 0.89296 0.5880536 0.293022 5 0.88602 0.6187573 0.2672638 3.1140e-09 0.99935 hypermethylated 2.0760e-07 1 hypermethylated 5.6882e-05 0.95098 hypermethylated 4.7401e-03 1 hypermethylated 0.211836 5.2274e-03 lowCoverage 3.2671e-01 lowCoverage 0.89296 0.83958 0.062307 5 0.88602 0.77980 0.106224 2.6454e-04 0.502075 weaklyHypermeth 2.2045e-02 1 weaklyHypermeth 0.00471883 0.68184 weaklyHypermeth 0.3932356 1 insignificant 0.1024746 0.04619052 weaklyHypermeth 1.00000 insignificant 0.5880536 0.83958 -0.228570 5 0.6187573 0.77980 -0.16104 0.99977 1.2593e-03 weaklyHypometh 1 6.9964e-02 weaklyHypometh 0.97976 2.8527e-01 insignificant 1 1.0000e+00 insignificant -0.109361 1.0207e-01 lowCoverage 1.0000e+00 lowCoverage chr2 71765939 71766939 19339 DYSF ENSG00000135636 0.86879 94 4 0.84762 63 6 0.92698 52 4 0.90409 108 4 0.80303 31 3 0.66272 86 6 0.82511 43 4 0.87967 62 6 0.85714 53 5 0.97292 69 5 0.86232 148 6 0.83611 37 3 0.69121 45 5 0.75000 6 0 0.85880 59 3 0.75000 4 0 0.94286 29 3 0.86975 52 4 0.97294 59 5 0.85346 68 4 0.89205 52 6 0.78571 19 2 0.81446 95 4 0.85417 28 3 0.97667 43 2 0.88737 99 6 0.76481 43 5 0.77361 31 3 0.80952 27 3 0.94792 62 6 0.77050 50 5 0.86458 131 6 0.5508335 70 6 0.5671754 82 6 0.6698459 168 5 0.41905 28 3 0.752137 41 4 0.600000 87 6 0.70935 97 4 0.72114 138 3 0.59177 84 4 0.93735 90 3 0.84891 104 4 0.89436 0.93651 0.92778 0.87700 0.87374 0.90368 0.77576 0.85910 0.89815 0.94722 0.88643 0.85000 0.80461 0.76744 0.88889 0.61111 0.87546 0.82913 0.95202 0.73215 0.90909 0.61111 0.86534 0.86111 0.97130 0.82235 0.87222 0.85278 0.61905 0.96181 0.68408 0.89229 0.5083060 0.5576720 0.685579 0.36056 0.913675 0.486508 0.77959 0.67501 0.62777 0.90469 0.82351 2 0.86644 0.85441 0.0079111 4 0.85605 0.85677 -0.00071352 0.020670 0.3858072 lowCoverage 1 1 lowCoverage 0.05167 0.4591515 lowCoverage 1 1 lowCoverage 0.0016617 0.95262 lowCoverage 1 lowCoverage 0.86644 0.5609244 0.276007 4 0.85605 0.5996988 0.256355 7.7173e-15 0.99712 lowCoverage 6.7013e-13 1 lowCoverage 7.5962e-06 0.99974 lowCoverage 7.5962e-04 1 lowCoverage 0.253603 1.5969e-03 lowCoverage 1.5969e-01 lowCoverage 0.86644 0.76608 0.100554 4 0.85605 0.74392 0.11213694 4.3898e-05 0.954371 lowCoverage 6.2712e-03 1 lowCoverage 1.1063e-02 0.973512 lowCoverage 1.000e+00 1 lowCoverage 0.0850735 2.3527e-01 lowCoverage 1.000000 lowCoverage 0.85441 0.5609244 0.275513 5 0.85677 0.5996988 0.2570685 1.0556e-10 0.98913 hypermethylated 7.5403e-09 1 hypermethylated 9.2865e-05 0.99188 hypermethylated 7.1435e-03 1 hypermethylated 0.251941 1.5664e-03 lowCoverage 1.1598e-01 lowCoverage 0.85441 0.76608 0.093959 4 0.85677 0.74392 0.112850 6.2572e-03 0.902365 lowCoverage 3.6203e-01 1 lowCoverage 0.04020410 0.92359 lowCoverage 1.0000000 1 lowCoverage 0.0834118 0.24501307 lowCoverage 1.00000 lowCoverage 0.5609244 0.76608 -0.170882 4 0.5996988 0.74392 -0.14422 0.98581 5.5062e-03 lowCoverage 1 2.7531e-01 lowCoverage 0.98219 1.5484e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.168530 5.6718e-02 lowCoverage 1.0000e+00 lowCoverage chr2 71797328 71798328 19342 DYSF ENSG00000135636 0.89219 110 7 0.70494 88 5 0.46502 103 8 0.69384 92 6 0.73157 71 5 0.89783 155 7 0.77327 66 5 0.93316 102 7 0.68370 55 3 0.73988 58 5 0.67620 162 7 0.88810 32 3 0.94043 68 5 0.53333 19 2 0.68730 54 5 0.80952 20 3 0.85000 19 1 0.36662 88 7 0.95480 92 7 0.86990 144 7 0.90962 76 5 0.93506 21 1 0.64108 112 7 0.54272 35 1 0.78413 25 3 0.86794 127 7 0.75680 53 5 1.00000 32 1 0.78503 65 3 0.88735 130 7 0.92608 102 7 0.95052 193 7 0.0000000 186 7 0.0285714 86 7 0.0096618 97 3 0.00000 29 1 0.118280 88 7 0.010617 212 7 0.74671 131 6 0.77118 127 6 0.73958 80 6 0.69164 59 3 0.67090 121 6 0.89777 0.71242 0.67382 0.83145 0.75126 0.90332 0.70120 0.92951 0.76214 0.77751 0.82221 0.91176 0.95781 0.47399 0.82135 0.68491 0.77424 0.43735 0.93326 0.85099 0.88454 0.73262 0.82224 0.73635 0.89114 0.86008 0.74323 0.98003 0.83053 0.89958 0.91239 0.92882 0.0000000 0.0196078 0.051151 0.00000 0.037951 0.014708 0.87421 0.86663 0.79575 0.67420 0.82126 1 0.80702 0.87951 -0.0643928 7 0.61114 0.72017 -0.10903470 0.999959 0.0342772 weaklyHypometh 1 1 insignificant 0.99999 0.0392890 weaklyHypometh 1 1 insignificant -0.0776131 0.15682 lowCoverage 1 lowCoverage 0.80702 0.0128940 0.795310 7 0.61114 0.0307461 0.580389 4.2137e-62 0.99991 hypermethylated 1.4046e-59 1 hypermethylated 1.0851e-17 0.99999 hypermethylated 5.4253e-15 1 hypermethylated 0.726726 2.1970e-15 hypermethylated 7.3233e-13 hypermethylated 0.80919 0.82239 -0.011965 6 0.63737 0.63680 0.00057044 6.4478e-01 0.713650 insignificant 1.0000e+00 1 insignificant 4.6794e-01 0.575894 insignificant 1.000e+00 1 insignificant 0.0305783 4.5880e-01 insignificant 1.000000 insignificant 0.87951 0.0128940 0.867290 7 0.72017 0.0307461 0.6894240 5.5358e-64 1.00000 hypermethylated 1.8453e-61 1 hypermethylated 3.8766e-14 1.00000 hypermethylated 1.2922e-11 1 hypermethylated 0.804339 1.0994e-11 lowCoverage 3.6648e-09 lowCoverage 0.87938 0.82239 0.047499 6 0.68908 0.63680 0.052276 1.3141e-01 0.993159 insignificant 1.0000e+00 1 insignificant 0.29767689 0.99692 insignificant 1.0000000 1 insignificant 0.1081914 0.02509221 lowCoverage 1.00000 lowCoverage 0.0129310 0.82239 -0.815206 6 0.0341624 0.63680 -0.60264 0.99997 3.9881e-45 hypomethylated 1 1.9941e-42 hypomethylated 0.99999 4.0260e-10 hypomethylated 1 1.3420e-07 hypomethylated -0.696148 8.8570e-10 hypomethylated 8.8570e-07 hypomethylated chr2 71811298 71812298 19350 DYSF ENSG00000135636 0.90008 334 6 0.83645 115 6 0.83874 99 6 0.94146 278 6 0.95956 60 6 0.91026 490 6 0.87517 129 6 0.95036 128 6 0.72562 66 6 0.93929 52 6 0.93019 214 6 1.00000 44 6 0.92211 103 6 0.89101 119 6 0.92016 137 6 1.00000 24 4 NA 0 0 0.88528 385 6 0.89934 255 6 0.94926 326 6 1.00000 45 4 0.92361 34 4 0.95285 196 6 0.91270 60 6 0.86526 55 6 0.94488 259 6 0.83710 126 6 0.79286 41 4 0.91641 264 6 0.95767 232 6 0.91458 196 6 0.92440 249 6 0.7707895 123 6 0.7747821 212 6 0.5017509 136 2 0.97222 36 4 0.703260 103 6 0.949142 261 6 0.93608 438 6 0.91726 274 6 0.94211 264 6 0.82895 569 6 0.88493 262 6 0.89833 0.83929 0.84810 0.94596 0.96441 0.91189 0.86233 0.95354 0.85175 0.93350 0.92988 1.00000 0.92961 0.89353 0.92559 1.00000 NA 0.88585 0.89647 0.95092 1.00000 0.92861 0.95164 0.91984 0.85750 0.94143 0.84942 0.92167 0.91824 0.95866 0.91689 0.92681 0.8202328 0.7824619 0.600207 0.92357 0.819067 0.950536 0.93829 0.91889 0.94607 0.83208 0.86753 3 0.90679 0.92089 -0.0125296 6 0.80790 0.81880 -0.01089381 0.995736 0.0908229 insignificant 1 1 insignificant 0.91371 0.1882815 insignificant 1 1 insignificant -0.0026845 0.90268 insignificant 1 insignificant 0.90673 0.8381171 0.063866 6 0.78046 0.7549158 0.025543 1.1426e-03 0.97063 weaklyHypermeth 3.9171e-02 1 weaklyHypermeth 5.7437e-02 0.99715 insignificant 1.0000e+00 1 insignificant 0.130518 1.2472e-01 insignificant 1.0000e+00 insignificant 0.90673 0.88323 0.020281 6 0.78046 0.90667 -0.12621505 2.9672e-01 0.973875 insignificant 1.0000e+00 1 insignificant 2.6150e-01 0.960499 insignificant 1.000e+00 1 insignificant 0.0073107 7.7958e-01 insignificant 1.000000 insignificant 0.92246 0.8381171 0.075475 6 0.93577 0.7549158 0.1808499 1.8183e-04 0.99824 weaklyHypermeth 6.9934e-03 1 weaklyHypermeth 4.3112e-03 0.99936 weaklyHypermeth 1.9596e-01 1 insignificant 0.133202 1.1915e-01 insignificant 1.0000e+00 insignificant 0.92246 0.88323 0.032769 6 0.93577 0.90667 0.029092 2.4652e-02 0.999553 weaklyHypermeth 1.0000e+00 1 insignificant 0.08926410 0.99951 insignificant 1.0000000 1 insignificant 0.0099951 0.71338289 insignificant 1.00000 insignificant 0.8381171 0.88323 -0.043764 6 0.7549158 0.90667 -0.15176 0.91269 1.3280e-01 insignificant 1 1.0000e+00 insignificant 0.98414 2.9932e-01 insignificant 1 1.0000e+00 insignificant -0.123207 1.4580e-01 insignificant 1.0000e+00 insignificant chr2 71827299 71828299 19352 DYSF ENSG00000135636 0.77416 157 4 0.66284 261 6 0.66499 103 6 0.70231 90 3 0.79198 84 6 0.69269 290 5 0.65497 112 6 0.63907 104 6 0.70635 77 6 0.81857 64 6 0.75498 266 6 0.43210 71 5 0.73256 97 6 0.59135 36 3 0.71188 117 5 0.67679 48 6 0.71757 331 6 0.39779 162 5 0.70100 269 6 0.79566 300 6 0.76302 112 6 0.26667 11 0 0.67144 175 6 0.61677 62 5 0.62500 11 1 0.71743 280 6 0.71832 146 6 0.63197 61 6 0.58534 285 6 0.62873 280 5 0.68171 363 6 0.83378 254 6 0.0372685 254 6 0.0075758 172 6 0.0052632 119 5 0.20000 21 3 0.149651 313 6 0.073494 379 5 0.36423 281 6 0.31377 227 6 0.28260 111 3 0.32968 176 5 0.47632 131 5 0.79910 0.68971 0.61314 0.79412 0.77935 0.69310 0.72672 0.61953 0.61423 0.74803 0.75696 0.41226 0.69287 0.46521 0.66584 0.67223 0.79806 0.49119 0.68766 0.78801 0.79248 0.41673 0.66820 0.66995 0.44634 0.69615 0.72240 0.78622 0.68206 0.74078 0.69987 0.84807 0.0128403 0.0045154 0.021729 0.03462 0.076290 0.033875 0.21169 0.24030 0.23136 0.10058 0.31352 3 0.74005 0.75980 -0.0205222 6 0.62986 0.71605 -0.08618738 0.636818 0.2888163 insignificant 1 1 insignificant 0.34290 0.4273350 insignificant 1 1 insignificant 0.0359654 0.44959 lowCoverage 1 lowCoverage 0.74085 0.0270270 0.713464 6 0.71481 0.0640406 0.650772 7.0599e-49 1.00000 hypermethylated 1.7650e-46 1 hypermethylated 2.8848e-14 1.00000 hypermethylated 7.2120e-12 1 hypermethylated 0.602106 1.2358e-08 hypermethylated 2.0596e-06 hypermethylated 0.74069 0.21814 0.517518 5 0.68412 0.43934 0.24478390 6.3482e-22 0.999579 hypermethylated 6.3482e-19 1 hypermethylated 9.6141e-10 0.999950 hypermethylated 9.614e-07 1 hypermethylated 0.3276606 2.8299e-05 hypermethylated 0.028299 hypermethylated 0.75994 0.0270270 0.732720 6 0.70473 0.0640406 0.6406883 7.5701e-43 1.00000 hypermethylated 1.8925e-40 1 hypermethylated 8.2075e-10 1.00000 hypermethylated 1.6415e-07 1 hypermethylated 0.566141 1.0688e-08 lowCoverage 2.1376e-06 lowCoverage 0.75969 0.21814 0.543687 5 0.67548 0.43934 0.236141 7.2208e-22 0.999998 hypermethylated 7.2208e-19 1 hypermethylated 0.00003229 0.99846 hypermethylated 0.0080725 1 hypermethylated 0.2916951 0.00007431 lowCoverage 0.07431 lowCoverage 0.0270270 0.21730 -0.193494 5 0.0640406 0.34590 -0.28186 1.00000 9.9063e-12 weaklyHypometh 1 1.6510e-09 weaklyHypometh 0.99999 7.0340e-06 weaklyHypometh 1 1.4068e-03 weaklyHypometh -0.274445 2.5436e-04 hypomethylated 4.2394e-02 hypomethylated chr2 71930135 71931135 19368 DYSF ENSG00000135636 0.86768 94 5 0.56810 108 4 0.73806 117 5 0.80871 107 5 0.76118 76 5 0.82930 136 5 0.80300 78 5 0.73883 131 5 0.80465 94 5 0.95122 102 5 0.82256 109 5 0.86681 69 4 0.52825 88 5 0.79293 72 4 0.73619 171 5 0.78588 78 4 0.50000 208 1 0.82947 97 5 0.69507 92 4 0.86437 88 5 0.57273 69 5 0.77939 67 4 0.78840 83 5 0.94583 62 5 0.85381 54 3 0.72756 54 5 0.79097 113 5 0.81388 89 5 0.85930 115 5 0.74702 190 5 0.81813 97 4 0.84731 106 5 0.4447847 100 5 0.5322658 88 5 0.0000000 9 1 0.66667 15 1 0.678452 92 5 0.585091 139 5 0.84027 127 5 0.76446 107 5 0.79479 119 5 0.87472 84 5 0.81839 112 5 0.88031 0.54682 0.74597 0.80151 0.80754 0.83760 0.81202 0.69819 0.72967 0.90033 0.78205 0.84317 0.46836 0.82267 0.71567 0.65582 0.63631 0.80633 0.64394 0.81343 0.80662 0.73770 0.80083 0.90895 0.86596 0.75151 0.72085 0.78797 0.88724 0.71931 0.75582 0.83052 0.4075497 0.5908654 NA 0.65545 0.553840 0.476652 0.87264 0.78204 0.78974 0.87863 0.81000 4 0.76596 0.77798 -0.0122223 5 0.83923 0.59881 0.24042260 0.924948 0.5788428 insignificant 1 1 insignificant 0.89152 0.6002705 insignificant 1 1 insignificant -0.0307466 0.41120 lowCoverage 1 lowCoverage 0.76596 0.4762980 0.280201 5 0.83923 0.5407713 0.298462 3.4508e-09 0.89021 hypermethylated 2.3006e-07 1 hypermethylated 1.9119e-04 0.72644 hypermethylated 1.3657e-02 1 hypermethylated 0.280070 4.1270e-02 lowCoverage 1.0000e+00 lowCoverage 0.76551 0.78871 -0.048725 5 0.77493 0.81967 -0.04474809 9.1465e-01 0.176512 insignificant 1.0000e+00 1 insignificant 8.7574e-01 0.173391 insignificant 1.000e+00 1 insignificant -0.0539105 1.0899e-01 lowCoverage 1.000000 lowCoverage 0.77798 0.4762980 0.300515 5 0.59881 0.5407713 0.0580391 2.5998e-11 0.92592 hypermethylated 2.1665e-09 1 hypermethylated 1.7726e-03 0.78925 weaklyHypermeth 1.0092e-01 1 insignificant 0.310817 2.8569e-02 lowCoverage 1.0000e+00 lowCoverage 0.78349 0.78871 -0.033436 5 0.79833 0.81967 -0.021340 7.5279e-01 0.222003 insignificant 1.0000e+00 1 insignificant 0.68921607 0.50375 insignificant 1.0000000 1 insignificant -0.0231639 0.48428542 lowCoverage 1.00000 lowCoverage 0.4761905 0.78871 -0.344515 5 0.5570799 0.81967 -0.26259 0.96212 1.0744e-08 hypomethylated 1 1.5349e-06 hypomethylated 0.90849 3.0819e-03 weaklyHypometh 1 2.8017e-01 insignificant -0.333981 2.2350e-02 lowCoverage 1.0000e+00 lowCoverage chr2 72112671 72113671 19387 DYSF ENSG00000135636 0.94015 156 5 0.79894 140 5 0.76136 141 3 0.95775 130 4 0.96552 101 5 0.79719 267 5 0.95207 118 5 0.95931 86 4 0.87470 80 4 0.95904 129 3 0.87829 133 5 0.82118 52 3 0.96285 97 3 0.71813 67 4 0.90206 121 4 0.83636 69 3 NA 0 0 0.92012 252 5 0.89675 133 5 0.93372 262 5 0.98000 38 4 1.00000 19 1 0.67199 123 5 0.96667 47 4 0.99130 31 1 0.81467 165 5 0.93533 146 5 0.93333 54 5 0.96372 124 5 0.94065 150 5 0.85169 206 5 0.93978 217 5 0.6926033 145 5 0.7814211 204 5 1.0000000 79 5 0.50000 11 0 0.669842 106 5 0.677112 190 5 0.89860 204 5 0.90241 172 5 0.77820 95 4 0.74530 202 4 0.95030 145 5 0.90925 0.80594 0.87026 0.94845 0.94837 0.90333 0.97043 0.96574 0.84969 0.92572 0.93852 0.80251 0.94371 0.93283 0.90642 0.75065 NA 0.92403 0.87982 0.91444 0.96971 0.99961 0.90996 0.99886 0.99627 0.97540 0.91247 0.97143 0.95450 0.92062 0.92060 0.92600 0.8155739 0.9024386 1.000000 0.39273 0.827851 0.773351 0.93301 0.92705 0.94827 0.92503 0.96461 3 0.90091 0.93485 -0.0346110 5 0.82800 0.74140 0.08660619 0.954200 0.0173986 weaklyHypometh 1 1 insignificant 0.97598 0.0061506 weaklyHypometh 1 1 insignificant -0.0296815 0.36971 lowCoverage 1 lowCoverage 0.90055 0.7863946 0.089934 5 0.72450 0.6464178 0.078085 6.9596e-06 0.98451 weaklyHypermeth 3.3141e-04 1 weaklyHypermeth 2.4109e-01 0.98456 insignificant 1.0000e+00 1 insignificant 0.165917 5.6444e-02 lowCoverage 1.0000e+00 lowCoverage 0.90122 0.93032 -0.029131 5 0.88267 0.84520 0.03747065 8.0705e-01 0.260424 insignificant 1.0000e+00 1 insignificant 6.4274e-01 0.301476 insignificant 1.000e+00 1 insignificant 0.0311150 4.9985e-01 lowCoverage 1.000000 lowCoverage 0.93485 0.7874659 0.156651 5 0.74140 0.7387632 0.0026342 3.7087e-06 0.99887 weaklyHypermeth 1.9519e-04 1 weaklyHypermeth 1.4729e-02 0.99804 weaklyHypermeth 5.2604e-01 1 insignificant 0.195598 3.2165e-02 lowCoverage 1.0000e+00 lowCoverage 0.93556 0.93032 0.007854 5 0.86496 0.84520 0.019763 3.4878e-01 0.865015 insignificant 1.0000e+00 1 insignificant 0.17213614 0.99540 insignificant 1.0000000 1 insignificant 0.0607965 0.24008949 lowCoverage 1.00000 lowCoverage 0.7871760 0.93032 -0.104930 5 0.6952237 0.84520 -0.14998 0.99270 8.1102e-03 weaklyHypometh 1 3.8620e-01 insignificant 0.98975 2.0439e-01 insignificant 1 1.0000e+00 insignificant -0.134802 1.2274e-01 lowCoverage 1.0000e+00 lowCoverage chr2 73404391 73405391 19503 ENSG00000208925 0.77927 511 8 0.76374 765 8 0.62537 170 8 0.80368 532 8 0.72346 120 6 0.87276 723 8 0.80614 274 8 0.82295 230 8 0.83155 111 8 0.94603 53 8 0.71756 569 8 0.67173 31 3 0.76771 114 8 0.75730 109 8 0.72783 117 8 0.89265 52 5 NA 0 0 0.77180 436 8 0.81991 183 7 0.78520 480 8 0.70819 107 8 0.70000 7 0 0.76529 277 8 0.92159 146 8 0.92877 82 5 0.88323 665 8 0.66137 99 8 0.73778 68 7 0.75277 160 8 0.89564 777 8 0.83616 730 8 0.82372 645 8 0.0018215 392 8 0.0000000 147 8 0.0000000 612 6 0.00000 1 0 0.010327 609 8 0.024735 533 8 0.81523 920 8 0.74870 784 8 0.77102 833 8 0.80164 216 7 0.60240 667 8 0.81198 0.82106 0.68541 0.83591 0.75450 0.90027 0.85191 0.85347 0.83911 0.95013 0.82972 0.76345 0.83364 0.81507 0.79321 0.87667 NA 0.79277 0.84455 0.81957 0.75145 0.83443 0.80428 0.93695 0.90229 0.89367 0.68211 0.87418 0.80415 0.90371 0.86238 0.84680 0.0015520 0.0000000 0.000000 NA 0.013292 0.020447 0.82480 0.78658 0.80837 0.80889 0.62156 1 0.81359 0.84853 -0.0361730 8 0.81659 0.85177 -0.03517768 0.999941 0.0057201 weaklyHypometh 1 1 insignificant 0.98310 0.1692098 insignificant 1 1 insignificant -0.0177025 0.58434 insignificant 1 insignificant 0.81344 0.0095902 0.803769 8 0.73493 0.0076453 0.727287 4.7935e-108 1.00000 hypermethylated 4.7935e-105 1 hypermethylated 7.5836e-18 1.00000 hypermethylated 5.4253e-15 1 hypermethylated 0.777361 3.4602e-21 hypermethylated 1.7301e-18 hypermethylated 0.81355 0.76374 0.052018 8 0.79367 0.74897 0.04469407 3.4973e-03 0.998710 weaklyHypermeth 3.4973e-01 1 insignificant 1.4414e-02 0.991694 weaklyHypermeth 1.000e+00 1 insignificant 0.0357100 4.2810e-01 insignificant 1.000000 insignificant 0.84853 0.0095986 0.838934 8 0.85177 0.0084948 0.8432742 1.7135e-83 1.00000 hypermethylated 1.7135e-80 1 hypermethylated 5.7868e-16 1.00000 hypermethylated 5.7868e-13 1 hypermethylated 0.795063 3.4768e-12 hypermethylated 2.1303e-09 hypermethylated 0.84840 0.76374 0.087198 8 0.83324 0.74897 0.084269 1.4306e-05 0.999999 weaklyHypermeth 1.7882e-03 1 weaklyHypermeth 0.00287079 0.99976 weaklyHypermeth 0.2791326 1 insignificant 0.0534125 0.28404518 insignificant 1.00000 insignificant 0.0096028 0.76374 -0.740852 8 0.0095566 0.74897 -0.73941 1.00000 5.5714e-47 hypomethylated 1 5.5714e-44 hypomethylated 1.00000 9.2434e-12 hypomethylated 1 9.2434e-09 hypomethylated -0.741651 3.5629e-05 hypomethylated 8.9072e-03 hypomethylated chr2 73404964 73405964 19504 ENSG00000208925 0.76239 472 7 0.76895 655 7 0.66277 159 7 0.80311 506 7 0.74110 115 5 0.86386 646 7 0.80906 260 7 0.82363 208 7 0.83129 105 7 0.93061 47 7 0.70207 487 7 0.73197 27 3 0.78810 106 7 0.74643 103 7 0.72791 106 7 0.87732 50 5 NA 0 0 0.75824 421 7 0.79418 182 7 0.78442 394 7 0.70222 99 7 0.70000 7 0 0.76538 243 7 0.94848 116 7 0.91859 81 5 0.86051 570 7 0.61564 84 7 0.84318 66 7 0.75827 153 7 0.87475 680 7 0.82863 640 7 0.81977 571 7 0.0020492 354 7 0.0000000 138 7 0.0000000 570 5 NA 0 0 0.013277 534 7 0.028268 460 7 0.81154 769 7 0.75048 693 7 0.77700 785 7 0.77330 212 7 0.61838 614 7 0.80883 0.82451 0.69725 0.83695 0.76019 0.89899 0.85435 0.85477 0.83932 0.94829 0.82929 0.78235 0.84132 0.81440 0.79564 0.87213 NA 0.79005 0.83883 0.82063 0.75150 0.83768 0.80574 0.94444 0.89870 0.89250 0.68355 0.90636 0.80745 0.90247 0.86140 0.84663 0.0016092 0.0000000 0.000000 NA 0.013781 0.021200 0.82420 0.78843 0.81129 0.80186 0.62638 1 0.81458 0.84622 -0.0335621 7 0.79222 0.82878 -0.03656118 0.998783 0.0044828 weaklyHypometh 1 1 insignificant 0.96368 0.0703489 insignificant 1 1 insignificant -0.0183511 0.57096 insignificant 1 insignificant 0.81442 0.0107004 0.803729 7 0.69319 0.0095566 0.683637 1.7010e-97 1.00000 hypermethylated 8.5052e-95 1 hypermethylated 5.8391e-16 1.00000 hypermethylated 1.9464e-13 1 hypermethylated 0.775882 1.1597e-23 hypermethylated 1.1597e-20 hypermethylated 0.81458 0.76570 0.051455 7 0.79222 0.74934 0.04288238 4.1145e-03 0.996926 weaklyHypermeth 3.5651e-01 1 insignificant 1.0646e-02 0.989744 weaklyHypermeth 1.000e+00 1 insignificant 0.0384623 3.3465e-01 insignificant 1.000000 insignificant 0.84622 0.0107108 0.835198 7 0.82878 0.0109218 0.8178605 7.7487e-75 1.00000 hypermethylated 3.8743e-72 1 hypermethylated 2.6726e-14 1.00000 hypermethylated 1.2922e-11 1 hypermethylated 0.794233 4.2606e-12 hypermethylated 2.1303e-09 hypermethylated 0.84622 0.76570 0.083004 7 0.82878 0.74934 0.079444 4.6718e-05 0.999993 weaklyHypermeth 4.6718e-03 1 weaklyHypermeth 0.00197190 0.99980 weaklyHypermeth 0.2464874 1 insignificant 0.0568134 0.22301634 insignificant 1.00000 insignificant 0.0107108 0.76570 -0.740212 7 0.0109218 0.74934 -0.73842 1.00000 1.0635e-41 hypomethylated 1 3.5450e-39 hypomethylated 1.00000 3.0169e-10 hypomethylated 1 1.3420e-07 hypomethylated -0.737420 1.7120e-05 hypomethylated 6.5899e-03 hypomethylated chr2 77156317 77157317 19679 ENSG00000200028 0.88004 240 7 0.89090 103 6 0.66390 113 6 0.94805 141 7 0.90936 62 4 0.86834 159 6 0.68095 40 4 0.86553 95 4 0.82212 58 4 0.87782 92 4 0.76210 204 6 0.81476 42 5 0.86429 87 5 0.83333 18 2 0.83873 80 5 0.85772 62 5 0.87897 42 3 0.87193 140 6 0.85861 131 6 0.90970 162 6 0.81875 36 3 0.91973 47 4 0.87727 121 7 0.98958 52 4 0.78699 53 4 0.87543 139 6 0.87064 58 4 0.92361 40 4 0.75330 70 4 0.88669 125 6 0.81789 93 5 0.84660 201 6 0.8843838 66 5 0.7861395 50 6 0.7358759 131 6 0.86173 41 5 0.871212 41 4 0.834206 137 6 0.89434 224 7 0.93510 239 7 0.87873 188 7 0.91469 203 7 0.93034 168 7 0.89297 0.89053 0.78966 0.94655 0.88571 0.85055 0.68257 0.82710 0.82202 0.91120 0.82260 0.81442 0.84686 0.87684 0.84792 0.81928 0.91916 0.82995 0.85532 0.88872 0.94281 0.88266 0.86279 0.98938 0.80000 0.87170 0.82163 0.90850 0.83110 0.88958 0.82679 0.87024 0.8695534 0.7209967 0.812629 0.90637 0.852347 0.811985 0.87554 0.93837 0.84648 0.90417 0.91091 4 0.85845 0.86267 -0.0081435 6 0.86853 0.88431 -0.01577566 0.799013 0.5118808 insignificant 1 1 insignificant 0.99522 0.1411024 insignificant 1 1 insignificant -0.0190165 0.44425 lowCoverage 1 lowCoverage 0.85832 0.8111588 0.046483 6 0.84975 0.7955428 0.054206 2.5995e-03 0.99657 weaklyHypermeth 8.3855e-02 1 weaklyHypermeth 2.6664e-01 0.84083 insignificant 1.0000e+00 1 insignificant 0.015932 5.8534e-01 insignificant 1.0000e+00 insignificant 0.85832 0.92857 -0.042375 6 0.84975 0.90986 -0.06010682 9.9955e-01 0.011951 weaklyHypometh 1.0000e+00 1 insignificant 9.3358e-01 0.061676 insignificant 1.000e+00 1 insignificant -0.0657819 2.5261e-03 weaklyHypometh 0.505225 insignificant 0.86254 0.8111588 0.054431 6 0.86778 0.7955428 0.0722355 1.5826e-02 0.99412 weaklyHypermeth 4.6548e-01 1 insignificant 1.2958e-01 0.98951 insignificant 1.0000e+00 1 insignificant 0.034948 2.6724e-01 lowCoverage 1.0000e+00 lowCoverage 0.86254 0.92857 -0.035334 6 0.86778 0.90986 -0.042078 9.9153e-01 0.075588 insignificant 1.0000e+00 1 insignificant 0.57586041 0.78598 insignificant 1.0000000 1 insignificant -0.0467654 0.04610800 lowCoverage 1.00000 lowCoverage 0.8111588 0.92857 -0.089134 6 0.7955428 0.90986 -0.11431 0.99999 2.8776e-05 weaklyHypometh 1 2.0555e-03 weaklyHypometh 0.94558 5.1296e-02 insignificant 1 1.0000e+00 insignificant -0.081713 1.5851e-02 weaklyHypometh 1.0000e+00 insignificant chr2 85269881 85270881 20042 TCF7L1 ENSG00000152284 0.808152 354 7 0.89149 217 7 0.86925 112 7 0.713635 375 7 0.882370 75 7 0.85213 290 7 0.941468 55 5 0.92021 192 7 0.674314 130 7 0.962088 175 7 0.89606 174 7 0.88810 31 3 0.842107 308 7 0.90578 111 7 0.793296 169 7 0.866071 15 2 0.700000 23 2 0.625336 419 7 0.78343 138 7 0.77304 228 7 0.65417 40 3 0.248509 240 7 0.87252 128 7 0.68580 74 4 0.747473 96 5 0.838472 228 7 0.788251 126 7 0.878231 41 5 0.82119 149 7 0.893549 232 7 0.8285547 218 7 0.92776 293 7 0.86834 144 7 0.8064713 91 7 0.664983 326 5 0.69762 47 4 0.89065 107 7 0.6419572 230 7 0.060722 503 7 0.206749 335 7 0.118376 296 7 0.218572 285 7 0.231048 381 7 0.793921 0.88165 0.85998 0.694684 0.845205 0.82189 0.909101 0.907306 0.747561 0.93277 0.88377 0.85484 0.813916 0.89834 0.790116 0.86469 0.541341 0.57921 0.896803 0.748812 0.78101 0.244563 0.84590 0.693855 0.749830 0.834284 0.764056 0.89175 0.819235 0.883290 0.812049 0.93018 0.82595 0.715722 0.692214 0.58715 0.85407 0.644230 0.055834 0.187851 0.118918 0.250533 0.22120 3 0.805625 0.766220 0.0357602 7 0.76756 0.691230 0.07632759 1.4705e-01 0.986855 insignificant 1.0000e+00 1 insignificant 0.2812806 0.978394 insignificant 1 1 insignificant 0.06404325 0.276575 insignificant 1 insignificant 0.805858 0.82857 -0.0103196 7 0.80829 0.78755 0.020737 2.0404e-02 0.00839445 weaklyHypometh 2.7205e-01 1.00000 insignificant 1.3553e-01 0.34031075 insignificant 1.0000e+00 1.00000 insignificant 0.067746 2.0367e-01 insignificant 1.00000000 insignificant 0.80586 0.15500 0.6423799 7 0.80829 0.163191 0.6450982 7.7515e-66 1.0000e+00 hypermethylated 7.7515e-63 1.000000 hypermethylated 1.9419e-16 1.0000e+00 hypermethylated 9.7094e-14 1.00000000 hypermethylated 0.662323 2.8768e-07 hypermethylated 0.00028768 hypermethylated 0.767492 0.82857 -0.0389687 7 0.76968 0.78755 -0.0178742 2.4147e-01 0.152383 insignificant 1.0000e+00 1 insignificant 2.6431e-01 0.1058884 insignificant 1.0000e+00 1 insignificant 0.003703 9.5763e-01 insignificant 1.0000000 insignificant 0.76749 0.15500 0.604850 7 0.769677 0.163191 0.6064866 2.5377e-23 1.0000e+00 hypermethylated 1.2689e-20 1.0000e+00 hypermethylated 3.3982e-14 1.0000e+00 hypermethylated 3.3982e-11 1.0000e+00 hypermethylated 0.598280 8.4983e-08 hypermethylated 8.4983e-05 hypermethylated 0.828571 0.15500 0.6560852 7 0.787551 0.163191 0.624361 3.2276e-24 1.0000e+00 hypermethylated 3.2276e-21 1.0000e+00 hypermethylated 6.9852e-09 1.0000e+00 hypermethylated 6.9852e-06 1.0000e+00 hypermethylated 0.5945768 2.3095e-06 hypermethylated 0.0023095 hypermethylated chr2 87276702 87277702 20103 ENSG00000204745 0.775556 31 2 0.70753 116 5 0.75000 5 0 0.814286 41 2 0.870335 55 4 0.72179 48 5 0.490061 43 2 0.74000 17 2 0.814286 19 2 0.884786 35 3 0.84833 62 5 0.79464 15 2 0.808611 42 4 0.71313 37 2 0.775000 24 2 0.666667 15 2 0.700000 64 2 0.847253 68 2 0.94503 63 4 0.95000 9 0 0.97500 23 2 1.000000 10 0 0.85846 52 4 0.81111 26 3 0.927273 40 4 0.800000 32 1 0.746667 21 3 0.666667 4 0 0.79206 63 5 0.744314 33 2 0.8041667 29 4 0.83333 13 0 0.75000 69 5 0.6813187 59 5 0.245455 28 1 0.40000 8 0 0.61111 31 1 0.8696154 60 4 0.912077 35 2 0.887941 68 5 0.791880 46 2 0.900000 26 2 0.883333 41 5 0.681609 0.58918 0.87241 0.660099 0.787494 0.55405 0.692017 0.455172 0.660099 0.86225 0.72816 0.84778 0.732567 0.64960 0.810345 0.72298 0.703998 0.77567 0.897056 0.862069 0.93103 1.000000 0.74748 0.651341 0.799373 0.801724 0.542529 0.61510 0.665846 0.627992 0.762591 0.88506 0.49845 0.487306 0.159875 0.20690 0.48467 0.783554 0.834083 0.824493 0.673961 0.798030 0.76437 0 0.772559 0.803468 -0.0063461 2 0.80530 0.826598 -0.02129790 5.8739e-01 0.068996 lowCoverage 1.0000e+00 1 lowCoverage 0.7834314 0.196869 lowCoverage 1 1 lowCoverage -0.04905614 0.191844 lowCoverage 1 lowCoverage 0.772559 0.62353 0.1788528 4 0.80530 0.70419 0.101112 8.5353e-05 0.84812089 lowCoverage 1.6414e-03 1.00000 lowCoverage 2.6372e-03 0.98547246 lowCoverage 6.8810e-02 1.00000 lowCoverage 0.187949 1.0467e-01 lowCoverage 1.00000000 lowCoverage 0.77256 0.81019 -0.0593878 5 0.80530 0.866732 -0.0614320 9.6464e-01 3.6842e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8858e-01 3.5182e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.094181 9.5438e-03 lowCoverage 0.41494591 lowCoverage 0.803468 0.62353 0.1673161 2 0.82660 0.70419 0.1224102 1.0485e-04 0.977347 lowCoverage 2.1845e-03 1 lowCoverage 7.4664e-04 0.9999639 lowCoverage 2.4888e-02 1 lowCoverage 0.237005 5.3504e-02 lowCoverage 1.0000000 lowCoverage 0.80347 0.81019 -0.040062 2 0.826598 0.866732 -0.0401341 8.2745e-01 1.8136e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5111e-01 2.6223e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.045125 2.2207e-01 lowCoverage 1.0000e+00 lowCoverage 0.623529 0.81019 -0.2390970 4 0.704188 0.866732 -0.162544 9.9819e-01 9.2216e-04 lowCoverage 1.0000e+00 2.9747e-02 lowCoverage 9.9990e-01 1.0103e-03 lowCoverage 1.0000e+00 8.0875e-02 lowCoverage -0.2821298 2.9618e-02 lowCoverage 0.7794205 lowCoverage chr2 91208451 91209451 20189 ENSG00000212975 0.850313 1159 9 0.74289 265 9 0.45550 267 9 0.905628 800 9 0.731294 130 9 0.62303 1149 9 0.388610 231 9 0.60579 472 9 0.495553 225 9 0.655034 226 9 0.66648 648 9 0.68249 92 5 0.317428 486 9 0.83333 60 4 0.472084 330 9 0.340000 63 5 0.115211 232 5 0.862369 2402 9 0.51432 569 9 0.85710 772 9 0.60099 234 9 0.580210 454 9 0.73483 364 9 0.71072 183 9 0.642070 1307 9 0.548660 534 9 0.451114 457 9 0.303244 155 5 0.52673 413 9 0.383363 582 9 0.3848408 619 9 0.56504 868 9 0.34760 358 9 0.3293739 1056 9 0.268111 318 9 0.48613 391 9 0.36698 196 9 0.5656230 632 9 0.796301 589 9 0.855641 1106 9 0.660979 860 9 0.708170 880 9 0.839296 888 9 0.829178 0.78758 0.36567 0.907115 0.637907 0.53947 0.307368 0.534516 0.452449 0.59030 0.58587 0.55234 0.205650 0.55654 0.357634 0.43984 0.262085 0.84615 0.384944 0.840532 0.54541 0.455409 0.70461 0.624152 0.584995 0.473639 0.365344 0.20754 0.435168 0.280931 0.280514 0.48369 0.39423 0.332378 0.348637 0.47557 0.36182 0.534041 0.780444 0.835005 0.591006 0.639568 0.83096 9 0.703441 0.539222 0.1422295 9 0.67754 0.532557 0.14497798 4.0977e-11 1.000000 weaklyHypermeth 4.0977e-08 1 weaklyHypermeth 0.0048688 0.999989 weaklyHypermeth 1 1 insignificant 0.06973911 0.266980 insignificant 1 insignificant 0.703441 0.40427 0.3209207 9 0.67754 0.40507 0.272463 1.0766e-24 0.99999607 hypermethylated 1.5380e-22 1.00000 hypermethylated 4.0260e-09 0.99886259 hypermethylated 6.7099e-07 1.00000 hypermethylated 0.211753 5.0819e-03 weaklyHypermeth 0.18821959 insignificant 0.70344 0.77446 -0.0921845 9 0.67754 0.781353 -0.1038175 9.9491e-01 2.6203e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9990e-01 1.0032e-03 weaklyHypometh 1.0000e+00 0.25079450 insignificant -0.166355 1.4192e-02 weaklyHypometh 0.50686511 insignificant 0.539222 0.40427 0.1719691 9 0.53256 0.40507 0.1274854 2.5673e-11 0.554295 weaklyHypermeth 1.5102e-09 1 weaklyHypermeth 5.4970e-08 0.9028380 weaklyHypermeth 6.8712e-06 1 weaklyHypermeth 0.142014 3.3683e-02 weaklyHypermeth 0.8273992 insignificant 0.53922 0.77446 -0.245474 9 0.532557 0.781353 -0.2487955 1.0000e+00 5.6056e-16 hypomethylated 1.0000e+00 5.6056e-13 hypomethylated 1.0000e+00 1.0500e-11 hypomethylated 1.0000e+00 1.0500e-08 hypomethylated -0.236094 9.1071e-04 hypomethylated 1.3010e-01 insignificant 0.404270 0.77446 -0.4039998 9 0.405072 0.781353 -0.376281 1.0000e+00 2.1757e-18 hypomethylated 1.0000e+00 2.1757e-15 hypomethylated 1.0000e+00 4.9543e-11 hypomethylated 1.0000e+00 4.9543e-08 hypomethylated -0.3781080 1.2263e-04 hypomethylated 0.0257791 hypomethylated chr2 99949353 99950353 20327 ENSG00000222274 0.916031 378 11 0.88630 152 9 0.82667 102 6 0.939072 229 10 0.928030 62 6 0.81697 340 12 0.866685 107 6 0.83014 112 8 0.793651 68 6 0.705483 76 7 0.93745 267 11 0.89028 57 7 0.781027 148 9 NA 0 0 0.967725 94 8 0.949323 79 7 0.740827 67 7 0.939913 377 11 0.86947 105 10 0.84079 204 11 0.88889 29 1 0.879127 102 8 0.84939 190 11 0.97778 47 7 0.836824 104 9 0.905179 160 10 0.845821 108 8 0.808983 36 3 0.93525 75 8 0.872125 155 10 0.8542147 161 10 0.85024 336 11 0.75940 123 9 0.8090971 139 10 0.834503 200 9 0.80876 63 5 0.94246 44 4 0.9022678 218 11 0.930429 311 11 0.953734 429 11 0.943833 389 11 0.897256 358 11 0.933086 375 11 0.895737 0.85865 0.82464 0.926558 0.951977 0.81808 0.882139 0.867380 0.767487 0.75655 0.92091 0.88569 0.885379 NA 0.959125 0.92954 0.763153 0.93771 0.903929 0.834928 0.87419 0.834309 0.84529 0.975885 0.889780 0.916608 0.818073 0.85180 0.929271 0.864786 0.877224 0.84772 0.79934 0.802220 0.832869 0.82225 0.94023 0.875967 0.910473 0.949406 0.938105 0.900440 0.90119 3 0.887235 0.881491 0.0070221 10 0.88498 0.871439 0.01354413 2.4265e-01 0.747809 insignificant 1.0000e+00 1 insignificant 0.8257597 0.442769 insignificant 1 1 insignificant -0.01080010 0.623107 insignificant 1 insignificant 0.887235 0.84117 0.0478081 10 0.88498 0.84544 0.039546 4.2285e-03 0.98064105 weaklyHypermeth 6.5054e-02 1.00000 weaklyHypermeth 8.0877e-02 0.93717750 insignificant 1.0000e+00 1.00000 insignificant 0.021770 5.1871e-01 insignificant 1.00000000 insignificant 0.88724 0.93985 -0.0422051 10 0.88498 0.928462 -0.0434787 9.9983e-01 1.1442e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9894e-01 8.1077e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.067150 2.4735e-03 weaklyHypometh 0.17668053 insignificant 0.881491 0.84117 0.0439034 9 0.87144 0.84544 0.0260015 6.5249e-03 0.912672 weaklyHypermeth 9.8862e-02 1 weaklyHypermeth 2.3486e-02 0.9406510 weaklyHypermeth 4.3493e-01 1 insignificant 0.032570 3.2107e-01 insignificant 1.0000000 insignificant 0.88149 0.93985 -0.048076 10 0.871439 0.928462 -0.0570228 9.9998e-01 6.1310e-04 weaklyHypometh 1.0000e+00 2.0437e-01 insignificant 9.9788e-01 7.9824e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.056350 3.8743e-03 weaklyHypometh 3.5221e-01 insignificant 0.841169 0.93985 -0.0847123 9 0.845438 0.928462 -0.083024 9.9745e-01 2.0995e-05 weaklyHypometh 1.0000e+00 1.1664e-03 weaklyHypometh 9.7911e-01 2.3708e-03 weaklyHypometh 1.0000e+00 1.2478e-01 insignificant -0.0889201 2.1814e-02 weaklyHypometh 0.6415779 insignificant chr2 100179749 100180749 20355 AFF3 ENSG00000144218 0.927014 441 9 0.83010 372 9 0.81294 138 7 0.836996 378 9 0.799803 80 9 0.92069 461 9 0.695398 124 7 0.90623 265 9 0.847137 193 9 0.865357 212 9 0.91679 269 10 0.73333 34 2 0.895847 406 10 0.92156 98 4 0.912513 256 9 0.491453 66 6 0.688215 54 9 0.890316 559 10 0.93863 192 6 0.89084 315 9 0.68352 111 9 0.863563 225 10 0.85087 283 10 0.65084 156 8 0.830863 129 9 0.833574 396 10 0.769655 160 9 0.748288 111 9 0.79225 316 9 0.942584 474 9 0.9582612 390 10 0.93184 372 9 0.67537 386 10 0.7592539 186 9 0.530091 185 6 0.77381 35 5 0.73885 193 10 0.8073448 378 9 0.782204 311 7 0.856527 290 7 0.925135 329 7 0.896778 237 7 0.843882 458 9 0.904295 0.83511 0.87578 0.916036 0.883300 0.90862 0.794645 0.901064 0.850248 0.88779 0.91666 0.87477 0.912995 0.86290 0.904671 0.73025 0.764014 0.83900 0.921085 0.885364 0.84266 0.863926 0.89801 0.891528 0.928295 0.942641 0.857531 0.90893 0.900305 0.942681 0.945346 0.90125 0.64003 0.724524 0.694126 0.70692 0.79857 0.776318 0.854787 0.880804 0.897518 0.863845 0.87546 7 0.879503 0.906671 -0.0327843 9 0.87724 0.830357 0.04688489 9.3338e-01 0.011299 weaklyHypometh 1.0000e+00 1 insignificant 0.9254485 0.105127 insignificant 1 1 insignificant 0.01471646 0.698816 insignificant 1 insignificant 0.879503 0.70977 0.1674710 9 0.87724 0.73765 0.139594 3.1613e-11 0.99999887 weaklyHypermeth 1.5054e-09 1.00000 weaklyHypermeth 5.6665e-04 0.99981020 weaklyHypermeth 1.7171e-02 1.00000 weaklyHypermeth 0.121939 3.1252e-02 weaklyHypermeth 0.74409231 insignificant 0.87950 0.88615 0.0015358 7 0.87724 0.864244 0.0129984 7.0516e-01 7.4816e-01 insignificant 1.0000e+00 1.000000 insignificant 5.5903e-01 7.7266e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.024847 4.8743e-01 insignificant 1.00000000 insignificant 0.905860 0.70925 0.1952822 9 0.79449 0.67618 0.1183170 1.5039e-11 0.998627 weaklyHypermeth 9.3992e-10 1 weaklyHypermeth 4.3789e-04 0.9952031 weaklyHypermeth 1.7583e-02 1 weaklyHypermeth 0.107223 5.6862e-02 insignificant 1.0000000 insignificant 0.90667 0.88615 0.035311 7 0.830357 0.864244 -0.0338865 9.6301e-03 9.5517e-01 weaklyHypermeth 3.3207e-01 1.0000e+00 insignificant 4.6743e-02 8.5202e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.039563 3.0837e-01 insignificant 1.0000e+00 insignificant 0.709772 0.88615 -0.1699168 7 0.737648 0.864244 -0.126596 9.9994e-01 5.1381e-04 weaklyHypometh 1.0000e+00 1.7823e-02 weaklyHypometh 9.9945e-01 3.1967e-02 weaklyHypometh 1.0000e+00 6.6598e-01 insignificant -0.1467858 1.5273e-02 weaklyHypometh 0.5264729 insignificant chr2 104741089 104742089 20693 ENSG00000207249 0.054861 203 5 0.16996 138 5 0.14437 192 5 0.013113 145 4 0.047601 136 5 0.26340 267 5 0.046203 195 5 0.17525 174 5 0.070668 218 5 0.023506 237 5 0.13337 140 5 0.17158 157 5 0.027721 250 5 0.25299 133 4 0.037552 384 5 0.073091 132 5 0.077619 110 5 0.065078 207 4 0.04250 148 5 0.12080 240 5 0.11587 40 3 0.036514 139 4 0.10449 196 5 0.13327 109 5 0.038475 95 4 0.041817 242 5 0.026969 149 5 0.043878 80 5 0.04621 145 5 0.011655 209 5 0.0071508 229 5 0.13047 211 5 0.20747 148 5 0.0078431 127 5 0.434524 87 3 0.00000 20 1 0.14655 153 5 0.0079659 195 5 0.015462 302 5 0.053622 231 5 0.029743 185 5 0.090522 149 5 0.052071 259 5 0.076745 0.13312 0.24780 0.021169 0.069247 0.11221 0.079307 0.098652 0.092668 0.03617 0.17025 0.17414 0.031362 0.07780 0.048391 0.12260 0.079984 0.11589 0.080236 0.025069 0.20081 0.031893 0.11165 0.077736 0.037559 0.040961 0.049585 0.07800 0.073602 0.013410 0.008696 0.18719 0.10576 0.018801 0.352825 0.00000 0.11862 0.011767 0.014867 0.057772 0.031558 0.096233 0.07352 4 0.085985 0.062907 0.0236197 5 0.13943 0.056854 0.08257434 5.9155e-02 0.999700 insignificant 1.0000e+00 1 insignificant 0.0449054 0.999634 weaklyHypermeth 1 1 insignificant 0.03916490 0.076823 lowCoverage 1 lowCoverage 0.086098 0.09863 -0.0091577 5 0.16267 0.11999 0.042681 1.8877e-01 0.70433459 insignificant 1.0000e+00 1.00000 insignificant 1.3224e-02 0.97886716 inconclusive 2.6448e-01 1.00000 insignificant -0.033496 6.5781e-01 lowCoverage 1.00000000 lowCoverage 0.08406 0.05595 0.0333545 5 0.07520 0.046041 0.0291592 2.0663e-02 9.3778e-01 weaklyHypermeth 5.9038e-01 1.000000 insignificant 9.0794e-03 5.2258e-01 weaklyHypermeth 4.6504e-01 1.00000000 insignificant 0.052278 2.2747e-02 lowCoverage 0.73377184 lowCoverage 0.062941 0.09863 -0.0334335 5 0.06633 0.11999 -0.0536561 4.5670e-01 0.431844 insignificant 1.0000e+00 1 insignificant 2.1541e-01 0.6742368 insignificant 1.0000e+00 1 insignificant -0.072661 3.4959e-01 lowCoverage 1.0000000 lowCoverage 0.06267 0.05595 0.014788 5 0.054596 0.046041 0.0085551 3.1831e-01 2.1489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5211e-01 8.5236e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.013113 4.9026e-01 lowCoverage 1.0000e+00 lowCoverage 0.097662 0.05595 0.0510831 5 0.077316 0.046041 0.031276 2.7034e-01 1.6879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8379e-01 1.3650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0857744 2.7681e-01 lowCoverage 1.0000000 lowCoverage chr2 110030380 110031380 20802 ENSG00000186148 0.717175 161 5 0.72135 87 4 0.59195 84 4 0.777569 100 7 0.665855 47 4 0.69471 183 5 0.700894 71 4 0.72563 73 4 0.709478 56 4 0.713889 60 4 0.76034 95 4 0.66193 38 4 0.670855 64 4 NA 0 0 0.666934 60 4 0.662247 41 4 0.544655 254 5 0.681206 62 5 0.72745 110 5 0.83244 170 5 0.62708 25 4 0.805556 30 4 0.64503 81 5 0.70804 25 4 0.756250 26 4 0.704639 167 5 0.880952 28 2 0.802083 22 2 0.73647 53 4 0.802840 156 5 0.6956757 129 5 0.77286 247 5 0.62768 82 4 0.6590074 47 4 0.527496 148 7 0.73327 68 7 0.63571 44 4 0.7884582 139 5 0.795994 159 7 0.811719 178 7 0.766495 127 6 0.776061 135 5 0.787474 136 7 0.793170 0.73017 0.60129 0.712266 0.686755 0.72730 0.719921 0.734921 0.723118 0.72782 0.76756 0.67139 0.685619 NA 0.680317 0.66274 0.640301 0.74152 0.794685 0.790074 0.64463 0.822773 0.72901 0.711865 0.767769 0.725778 0.870130 0.79339 0.750398 0.786511 0.734043 0.77705 0.64755 0.677382 0.651607 0.83654 0.67119 0.750141 0.773889 0.783160 0.762536 0.801875 0.74534 3 0.706498 0.743668 -0.0364639 5 0.72881 0.757549 -0.02874274 9.9534e-01 0.128540 insignificant 1.0000e+00 1 insignificant 0.9822280 0.422827 insignificant 1 1 insignificant -0.04865360 0.071484 lowCoverage 1 lowCoverage 0.706498 0.66477 0.0341574 5 0.72881 0.61441 0.114400 1.6512e-02 0.90897838 weaklyHypermeth 2.2945e-01 1.00000 insignificant 1.6749e-01 0.90563797 insignificant 1.0000e+00 1.00000 insignificant 0.034197 4.1935e-01 lowCoverage 1.00000000 lowCoverage 0.70650 0.78367 -0.0692701 5 0.72881 0.799019 -0.0702121 9.9977e-01 5.2933e-03 weaklyHypometh 1.0000e+00 0.756189 insignificant 9.9992e-01 5.7929e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.091413 1.4552e-05 lowCoverage 0.00727576 lowCoverage 0.743668 0.66477 0.0708592 5 0.75755 0.61441 0.1431432 1.3310e-03 0.992038 weaklyHypermeth 2.3768e-02 1 weaklyHypermeth 7.2701e-02 0.9713091 insignificant 1.0000e+00 1 insignificant 0.082851 8.6017e-02 lowCoverage 1.0000000 lowCoverage 0.74367 0.78367 -0.031220 5 0.757549 0.799019 -0.0414694 9.9805e-01 6.2977e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9836e-01 6.4333e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.042760 7.9602e-02 lowCoverage 1.0000e+00 lowCoverage 0.664773 0.78367 -0.1206721 5 0.614406 0.799019 -0.184613 9.9935e-01 3.9954e-05 weaklyHypometh 1.0000e+00 2.1028e-03 weaklyHypometh 9.9913e-01 4.4534e-03 weaklyHypometh 1.0000e+00 1.7128e-01 insignificant -0.1256106 1.8437e-02 weaklyHypometh 0.5947373 insignificant chr2 111335314 111336314 20841 ACOXL ENSG00000153093 0.869852 403 8 0.86192 490 8 0.82253 229 7 0.782601 277 6 0.866684 180 8 0.84150 575 8 0.863133 272 9 0.88932 323 8 0.900417 255 8 0.946650 172 7 0.88174 502 9 0.83178 159 6 0.783099 265 8 0.92345 96 5 0.780719 283 8 0.754124 234 8 0.918954 368 3 0.827025 294 5 0.84452 431 7 0.82388 594 8 0.90349 111 7 0.134921 51 4 0.89331 194 7 0.89781 196 8 0.775000 27 3 0.830529 512 8 0.654879 175 8 0.948883 148 8 0.84803 384 7 0.848740 500 8 0.8947193 314 7 0.90130 327 7 0.71908 409 8 0.5489196 137 5 0.587468 259 5 0.58611 18 1 0.74829 346 8 0.6060393 298 7 0.185603 339 8 0.289402 287 7 0.478547 185 6 0.458238 308 6 0.510600 336 9 0.859776 0.82895 0.79631 0.767336 0.830425 0.81674 0.861492 0.847980 0.895309 0.93803 0.89749 0.84273 0.775916 0.89375 0.745250 0.75361 0.966071 0.75274 0.893813 0.824382 0.88665 0.216571 0.90388 0.859098 0.781602 0.853098 0.858933 0.94294 0.852267 0.807950 0.869179 0.88339 0.70371 0.536182 0.625235 0.56595 0.70490 0.619953 0.183701 0.314066 0.497438 0.529036 0.39368 4 0.848016 0.855003 -0.0074692 8 0.84774 0.857675 -0.00993108 8.0233e-01 0.130310 insignificant 1.0000e+00 1 insignificant 0.9681085 0.219418 insignificant 1 1 insignificant 0.05639369 0.402871 insignificant 1 insignificant 0.848016 0.58555 0.2618059 8 0.84774 0.55680 0.290948 1.8860e-23 1.00000000 hypermethylated 2.3575e-21 1.00000 hypermethylated 1.5298e-06 0.99999823 hypermethylated 1.1768e-04 1.00000 hypermethylated 0.218044 6.6627e-04 hypermethylated 0.03516253 hypermethylated 0.84802 0.43024 0.4453037 7 0.84774 0.395524 0.4522196 8.7521e-54 1.0000e+00 hypermethylated 4.3761e-51 1.000000 hypermethylated 1.5291e-20 1.0000e+00 hypermethylated 1.5291e-17 1.00000000 hypermethylated 0.466217 1.4367e-03 weaklyHypermeth 0.14366994 insignificant 0.855003 0.58555 0.2662253 8 0.85767 0.55680 0.3008793 6.3265e-13 0.999970 hypermethylated 6.3265e-11 1 hypermethylated 1.7151e-04 0.9999659 hypermethylated 8.5756e-03 1 hypermethylated 0.161651 3.9917e-02 weaklyHypermeth 0.9216992 insignificant 0.85500 0.43024 0.471722 7 0.857675 0.395524 0.4621506 2.4742e-29 1.0000e+00 hypermethylated 2.4742e-26 1.0000e+00 hypermethylated 2.9046e-12 1.0000e+00 hypermethylated 1.4523e-09 1.0000e+00 hypermethylated 0.409824 6.4769e-04 hypermethylated 1.0795e-01 insignificant 0.585549 0.43024 0.1653841 7 0.556795 0.395524 0.161271 2.5207e-06 9.7522e-01 weaklyHypermeth 1.2188e-03 1.0000e+00 weaklyHypermeth 2.5350e-04 1.0000e+00 weaklyHypermeth 1.2675e-01 1.0000e+00 insignificant 0.2481731 1.2349e-02 weaklyHypermeth 0.5127660 insignificant chr2 113686216 113687216 20893 PSD4 ENSG00000125637 0.715664 168 7 0.68575 141 8 0.66167 181 8 0.573187 155 5 0.833093 93 4 0.73325 212 8 0.698475 183 5 0.74678 93 7 0.719163 157 8 0.795422 126 8 0.83415 163 8 0.77929 186 5 0.556959 171 8 0.71515 99 5 0.673172 192 5 0.873682 243 5 0.810897 139 5 0.657478 257 8 0.77911 126 8 0.41670 212 8 0.89360 48 4 0.180106 144 5 0.62758 134 5 0.64845 50 4 0.865306 44 5 0.624761 226 8 0.719595 98 7 0.731973 82 4 0.71094 131 8 0.745301 197 8 0.5563714 199 8 0.70146 215 8 0.19257 198 8 0.2522847 201 8 0.413866 162 7 0.18750 36 2 0.25481 159 8 0.1118608 241 8 0.155813 224 8 0.210517 224 8 0.401715 172 5 0.521841 151 7 0.258177 235 6 0.814718 0.70441 0.70876 0.624061 0.801360 0.77230 0.772319 0.769708 0.756171 0.86273 0.89919 0.75296 0.530845 0.67128 0.702632 0.89679 0.772841 0.60389 0.830606 0.521382 0.96750 0.190904 0.76564 0.690781 0.878595 0.600295 0.771159 0.82323 0.709861 0.790555 0.505126 0.78843 0.20832 0.225374 0.422574 0.17828 0.37641 0.119074 0.109569 0.208173 0.291651 0.476186 0.21614 2 0.744920 0.672832 0.0519264 8 0.62945 0.628701 0.00075062 1.0947e-02 0.970711 weaklyHypermeth 1.0000e+00 1 insignificant 0.1258559 0.596240 insignificant 1 1 insignificant 0.04583166 0.437463 insignificant 1 insignificant 0.744920 0.21464 0.5209730 8 0.62945 0.19595 0.433497 4.0649e-41 1.00000000 hypermethylated 2.0325e-38 1.00000 hypermethylated 1.4611e-16 1.00000000 hypermethylated 7.3057e-14 1.00000 hypermethylated 0.477470 4.9746e-06 hypermethylated 0.00062182 hypermethylated 0.74492 0.25149 0.4686014 7 0.62945 0.248281 0.3811711 3.2718e-30 1.0000e+00 hypermethylated 8.1796e-28 1.000000 hypermethylated 1.4412e-13 1.0000e+00 hypermethylated 3.6031e-11 1.00000000 hypermethylated 0.403339 2.2451e-03 weaklyHypermeth 0.17668053 insignificant 0.672832 0.21464 0.4353166 8 0.62870 0.19595 0.4327463 1.7789e-22 1.000000 hypermethylated 4.4472e-20 1 hypermethylated 8.2260e-12 1.0000000 hypermethylated 4.1130e-09 1 hypermethylated 0.431639 8.8529e-06 hypermethylated 0.0017706 hypermethylated 0.67283 0.25149 0.412540 7 0.628701 0.248281 0.3804204 6.3658e-16 1.0000e+00 hypermethylated 1.5914e-13 1.0000e+00 hypermethylated 1.4643e-09 9.9995e-01 hypermethylated 3.6607e-07 1.0000e+00 hypermethylated 0.357508 2.2048e-03 weaklyHypermeth 2.4498e-01 insignificant 0.214644 0.25149 -0.0042858 7 0.195955 0.248281 -0.052326 3.1292e-01 1.7024e-02 weaklyHypometh 1.0000e+00 3.3381e-01 insignificant 3.7194e-01 7.6536e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0741311 3.7885e-01 insignificant 1.0000000 insignificant chr2 113686348 113687348 20894 PSD4 ENSG00000125637 0.715664 168 7 0.68575 141 8 0.66167 181 8 0.573187 155 5 0.833093 93 4 0.73325 212 8 0.698475 183 5 0.74678 93 7 0.719163 157 8 0.795422 126 8 0.83415 163 8 0.77929 186 5 0.556959 171 8 0.71515 99 5 0.673172 192 5 0.873682 243 5 0.810897 139 5 0.657478 257 8 0.77911 126 8 0.41670 212 8 0.89360 48 4 0.180106 144 5 0.62758 134 5 0.64845 50 4 0.865306 44 5 0.624761 226 8 0.719595 98 7 0.731973 82 4 0.71094 131 8 0.745301 197 8 0.5563714 199 8 0.70146 215 8 0.19257 198 8 0.2522847 201 8 0.413866 162 7 0.18750 36 2 0.25481 159 8 0.1118608 241 8 0.155813 224 8 0.210517 224 8 0.401715 172 5 0.521841 151 7 0.258177 235 6 0.814718 0.70441 0.70876 0.624061 0.801360 0.77230 0.772319 0.769708 0.756171 0.86273 0.89919 0.75296 0.530845 0.67128 0.702632 0.89679 0.772841 0.60389 0.830606 0.521382 0.96750 0.190904 0.76564 0.690781 0.878595 0.600295 0.771159 0.82323 0.709861 0.790555 0.505126 0.78843 0.20832 0.225374 0.422574 0.17828 0.37641 0.119074 0.109569 0.208173 0.291651 0.476186 0.21614 2 0.744920 0.672832 0.0519264 8 0.62945 0.628701 0.00075062 1.0947e-02 0.970711 weaklyHypermeth 1.0000e+00 1 insignificant 0.1258559 0.596240 insignificant 1 1 insignificant 0.04583166 0.437463 insignificant 1 insignificant 0.744920 0.21464 0.5209730 8 0.62945 0.19595 0.433497 4.0649e-41 1.00000000 hypermethylated 2.0325e-38 1.00000 hypermethylated 1.4611e-16 1.00000000 hypermethylated 7.3057e-14 1.00000 hypermethylated 0.477470 4.9746e-06 hypermethylated 0.00062182 hypermethylated 0.74492 0.25149 0.4686014 7 0.62945 0.248281 0.3811711 3.2718e-30 1.0000e+00 hypermethylated 8.1796e-28 1.000000 hypermethylated 1.4412e-13 1.0000e+00 hypermethylated 3.6031e-11 1.00000000 hypermethylated 0.403339 2.2451e-03 weaklyHypermeth 0.17668053 insignificant 0.672832 0.21464 0.4353166 8 0.62870 0.19595 0.4327463 1.7789e-22 1.000000 hypermethylated 4.4472e-20 1 hypermethylated 8.2260e-12 1.0000000 hypermethylated 4.1130e-09 1 hypermethylated 0.431639 8.8529e-06 hypermethylated 0.0017706 hypermethylated 0.67283 0.25149 0.412540 7 0.628701 0.248281 0.3804204 6.3658e-16 1.0000e+00 hypermethylated 1.5914e-13 1.0000e+00 hypermethylated 1.4643e-09 9.9995e-01 hypermethylated 3.6607e-07 1.0000e+00 hypermethylated 0.357508 2.2048e-03 weaklyHypermeth 2.4498e-01 insignificant 0.214644 0.25149 -0.0042858 7 0.195955 0.248281 -0.052326 3.1292e-01 1.7024e-02 weaklyHypometh 1.0000e+00 3.3381e-01 insignificant 3.7194e-01 7.6536e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0741311 3.7885e-01 insignificant 1.0000000 insignificant chr2 113797564 113798564 20902 PAX8 ENSG00000125618 0.788810 189 5 0.64192 201 5 0.59422 168 5 0.669818 225 5 0.897802 66 4 0.79504 261 5 0.680727 150 5 0.78179 152 5 0.702763 135 5 0.730712 139 5 0.83759 184 5 0.63326 120 5 0.766233 175 5 0.63636 33 1 0.733203 128 5 0.668413 110 4 0.768190 83 5 0.602411 240 5 0.73271 105 5 0.67591 195 5 0.79083 61 5 0.617460 98 4 0.71363 113 5 0.83810 81 5 0.603419 60 4 0.690659 251 5 0.726909 143 5 0.669952 80 5 0.68142 144 5 0.730689 263 5 0.7499963 228 5 0.77958 262 5 0.12360 212 5 0.1471930 126 5 0.034262 229 4 0.29037 39 5 0.15069 109 5 0.6476383 228 5 0.637113 218 5 0.592476 228 5 0.617465 224 4 0.470790 221 5 0.615580 217 4 0.784361 0.68376 0.64240 0.720500 0.843817 0.79766 0.713869 0.785616 0.744035 0.74143 0.85014 0.65559 0.768712 NA 0.737609 0.73305 0.889634 0.64799 0.783256 0.695398 0.75684 0.615198 0.68425 0.867582 0.650242 0.709191 0.714798 0.76667 0.756826 0.740847 0.769723 0.80549 0.14185 0.129912 0.033897 0.31681 0.13395 0.610117 0.703856 0.605424 0.607704 0.450141 0.61754 4 0.728016 0.723655 -0.0115383 5 0.71294 0.727668 -0.01473223 7.0388e-01 0.127490 insignificant 1.0000e+00 1 insignificant 0.5212080 0.311132 insignificant 1 1 insignificant 0.00083957 0.975311 lowCoverage 1 lowCoverage 0.728016 0.24602 0.4785276 5 0.71294 0.26250 0.450439 9.8705e-25 1.00000000 hypermethylated 1.5380e-22 1.00000 hypermethylated 1.3484e-10 1.00000000 hypermethylated 4.4948e-08 1.00000 hypermethylated 0.484602 2.5102e-03 lowCoverage 0.11410093 lowCoverage 0.72802 0.59025 0.1459555 5 0.71294 0.579736 0.1331996 5.7709e-07 9.9983e-01 weaklyHypermeth 4.8091e-05 1.000000 weaklyHypermeth 1.5092e-05 9.9683e-01 weaklyHypermeth 1.6769e-03 1.00000000 weaklyHypermeth 0.130209 6.8428e-03 lowCoverage 0.36014796 lowCoverage 0.723655 0.24602 0.4844914 5 0.72767 0.26250 0.4651711 2.5315e-17 1.000000 hypermethylated 3.6164e-15 1 hypermethylated 4.8151e-10 0.9999998 hypermethylated 1.6050e-07 1 hypermethylated 0.483763 2.4561e-03 lowCoverage 0.1169578 lowCoverage 0.72365 0.59025 0.156517 5 0.727668 0.579736 0.1479319 2.0820e-06 9.9576e-01 weaklyHypermeth 1.6015e-04 1.0000e+00 weaklyHypermeth 3.4073e-04 9.8513e-01 weaklyHypermeth 4.2591e-02 1.0000e+00 weaklyHypermeth 0.129369 7.2101e-03 lowCoverage 4.1004e-01 lowCoverage 0.246023 0.59025 -0.3353601 5 0.262497 0.579736 -0.317239 9.9998e-01 7.2070e-06 hypomethylated 1.0000e+00 4.2394e-04 hypomethylated 9.9999e-01 5.8554e-05 hypomethylated 1.0000e+00 1.1711e-02 hypomethylated -0.3543932 9.2580e-03 lowCoverage 0.4408589 lowCoverage chr2 114068989 114069989 20925 ENSG00000155352 0.965798 630 8 0.86628 913 8 0.86708 550 8 0.937859 488 8 0.876188 419 8 0.93599 1039 8 0.772563 445 8 0.89007 769 8 0.894071 459 8 0.877879 520 8 0.91992 1088 8 0.87477 147 7 0.962645 864 8 0.92960 453 8 0.933926 607 7 0.672464 82 7 0.000000 3 0 0.927034 620 7 0.94534 1567 8 0.91694 694 8 0.88542 356 8 0.876648 439 8 0.91259 558 8 0.89902 444 8 0.870256 327 7 0.966046 1228 8 0.876782 708 8 0.859513 272 8 0.90105 986 8 0.931784 1238 8 0.9354827 1040 8 0.88714 791 8 0.91050 682 8 0.8966272 515 8 0.937653 780 8 0.96719 103 7 0.85592 409 8 0.9306304 1099 8 0.961873 747 8 0.961354 538 8 0.879550 401 7 0.919541 390 7 0.954042 572 8 0.961479 0.88659 0.88477 0.950241 0.881372 0.94184 0.801578 0.917705 0.910990 0.91550 0.93106 0.87271 0.957475 0.93874 0.932616 0.71963 NA 0.93380 0.954060 0.932092 0.90791 0.930138 0.91385 0.908706 0.937754 0.967175 0.898562 0.87663 0.927450 0.950797 0.947959 0.91708 0.93336 0.925470 0.936322 0.96511 0.89058 0.948385 0.957829 0.967697 0.933931 0.942796 0.96805 7 0.921988 0.926672 -0.0057296 8 0.90778 0.913173 -0.00538918 8.6700e-01 0.276962 insignificant 1.0000e+00 1 insignificant 0.8451923 0.235668 insignificant 1 1 insignificant -0.05182270 0.293089 insignificant 1 insignificant 0.921988 0.93450 -0.0109637 8 0.90778 0.91988 -0.012096 2.5331e-01 0.00056048 weaklyHypometh 1.0000e+00 0.11210 insignificant 7.8050e-01 0.00013913 weaklyHypometh 1.0000e+00 0.13913 insignificant -0.068099 1.8403e-01 insignificant 1.00000000 insignificant 0.92199 0.95015 -0.0270417 8 0.90778 0.945712 -0.0379275 9.7516e-01 4.9300e-04 weaklyHypometh 1.0000e+00 0.123251 insignificant 9.9618e-01 3.1241e-06 weaklyHypometh 1.0000e+00 0.00156205 weaklyHypometh -0.086951 9.4539e-02 insignificant 1.00000000 insignificant 0.926672 0.93450 -0.0059381 8 0.91317 0.91988 -0.0067067 4.4420e-01 0.031729 weaklyHypometh 1.0000e+00 1 insignificant 8.0205e-01 0.0063274 weaklyHypometh 1.0000e+00 1 insignificant -0.016277 3.9191e-01 insignificant 1.0000000 insignificant 0.92667 0.95015 -0.021462 8 0.913173 0.945712 -0.0325383 9.9310e-01 4.2792e-03 weaklyHypometh 1.0000e+00 9.6438e-01 insignificant 9.9765e-01 3.2298e-04 weaklyHypometh 1.0000e+00 9.1851e-02 weaklyHypometh -0.035128 9.8661e-02 insignificant 1.0000e+00 insignificant 0.934504 0.95015 -0.0187830 8 0.919880 0.945712 -0.025832 7.4211e-01 7.6164e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8204e-01 1.9721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0188517 4.2075e-01 insignificant 1.0000000 insignificant chr2 114069679 114070679 20926 ENSG00000155352 0.957718 698 12 0.83417 1065 12 0.87794 757 12 0.920610 520 12 0.909747 651 11 0.90498 1147 12 0.839084 702 12 0.87648 917 12 0.889273 671 12 0.919589 774 12 0.92466 1493 12 0.86414 347 12 0.941572 1104 12 0.91705 470 9 0.912208 885 12 0.769684 332 11 0.716738 150 4 0.920933 666 11 0.91724 1889 12 0.92775 794 12 0.88654 444 11 0.885086 462 9 0.89813 698 12 0.89231 507 12 0.928319 361 9 0.959876 1436 12 0.877815 824 12 0.887474 364 12 0.90673 1063 12 0.922218 1351 12 0.9402108 1085 12 0.92274 894 12 0.87913 826 12 0.8604283 693 12 0.892726 1109 12 0.97813 107 7 0.84146 541 12 0.9169366 1191 12 0.961644 796 12 0.958724 594 12 0.878159 432 12 0.919732 413 10 0.932556 607 12 0.961127 0.87414 0.88626 0.946409 0.890131 0.93166 0.812868 0.909030 0.907079 0.92258 0.92993 0.87240 0.951464 0.93344 0.927533 0.73846 0.792293 0.92729 0.946744 0.932839 0.90342 0.928030 0.90970 0.905499 0.941347 0.962433 0.893370 0.88082 0.928659 0.942880 0.948507 0.92144 0.92344 0.911411 0.924754 0.96883 0.88448 0.944159 0.957858 0.967336 0.923486 0.941672 0.96098 9 0.916604 0.924860 -0.0057040 12 0.91491 0.921350 -0.00644264 9.6234e-01 0.213860 insignificant 1.0000e+00 1 insignificant 0.9765421 0.115140 insignificant 1 1 insignificant -0.02187638 0.159373 insignificant 1 insignificant 0.916599 0.90978 0.0095109 12 0.90782 0.88567 0.022144 2.1356e-04 0.09022996 weaklyHypermeth 4.0295e-03 1.00000 weaklyHypermeth 3.8369e-01 0.00497143 inconclusive 1.0000e+00 0.99429 insignificant -0.007722 7.5195e-01 insignificant 1.00000000 insignificant 0.91660 0.94722 -0.0251964 12 0.90782 0.938156 -0.0303401 9.9597e-01 5.2946e-05 weaklyHypometh 1.0000e+00 0.052946 weaklyHypometh 9.9867e-01 4.2705e-07 weaklyHypometh 1.0000e+00 0.00042705 weaklyHypometh -0.043084 5.5706e-02 insignificant 1.00000000 insignificant 0.924829 0.90978 0.0090808 12 0.91480 0.88567 0.0291232 3.5481e-04 0.462414 weaklyHypermeth 6.8233e-03 1 weaklyHypermeth 2.6152e-01 0.0904052 insignificant 1.0000e+00 1 insignificant 0.014154 5.2554e-01 insignificant 1.0000000 insignificant 0.92483 0.94722 -0.019767 12 0.914796 0.938156 -0.0233605 9.9775e-01 4.8219e-03 weaklyHypometh 1.0000e+00 9.6438e-01 insignificant 9.9825e-01 3.6740e-04 weaklyHypometh 1.0000e+00 9.1851e-02 weaklyHypometh -0.021208 2.5647e-01 insignificant 1.0000e+00 insignificant 0.909783 0.94722 -0.0246357 12 0.885673 0.938156 -0.052484 9.7640e-01 1.2196e-04 weaklyHypometh 1.0000e+00 5.3027e-03 weaklyHypometh 9.6047e-01 1.6977e-02 weaklyHypometh 1.0000e+00 4.3008e-01 insignificant -0.0353624 1.9047e-01 insignificant 1.0000000 insignificant chr2 114070036 114071036 20927 ENSG00000155352 0.953247 75 5 0.77533 216 5 0.90639 237 5 0.888889 42 5 0.954466 269 4 0.85533 129 5 0.911265 307 5 0.84193 180 5 0.885560 223 5 0.945264 268 5 0.91947 484 5 0.87430 203 5 0.919541 252 5 0.85833 27 2 0.895019 282 5 0.837966 256 5 0.860086 147 4 0.926984 48 4 0.87455 336 5 0.94282 112 5 0.87468 121 4 0.854902 38 2 0.89536 159 5 0.89022 94 5 0.902222 37 2 0.950583 251 5 0.860661 153 5 0.920782 114 5 0.91782 89 5 0.913168 156 5 0.9476124 111 5 0.94490 151 5 0.83089 180 5 0.8150397 191 5 0.839481 400 5 1.00000 6 0 0.83335 156 5 0.8983059 122 5 0.968947 71 5 0.962771 81 5 0.833636 34 5 0.920000 23 3 0.911667 44 5 0.962270 0.77239 0.90218 0.912854 0.953951 0.85197 0.891173 0.833913 0.877672 0.95581 0.91464 0.88257 0.910722 0.89004 0.896171 0.84122 0.838259 0.88515 0.889586 0.936913 0.86102 0.886454 0.88710 0.884165 0.908932 0.925666 0.843330 0.91089 0.936637 0.884005 0.951756 0.93967 0.84498 0.806148 0.843197 1.00000 0.84147 0.911119 0.962212 0.967801 0.819251 0.930719 0.91127 2 0.892988 0.902307 -0.0100333 5 0.91267 0.924751 -0.01208121 9.5226e-01 0.201254 insignificant 1.0000e+00 1 insignificant 0.9367580 0.194709 insignificant 1 1 insignificant -0.01473746 0.297011 lowCoverage 1 lowCoverage 0.892962 0.83128 0.0639696 5 0.89520 0.84244 0.052762 5.7735e-05 0.99936325 weaklyHypermeth 1.1321e-03 1.00000 weaklyHypermeth 1.6315e-01 0.91924433 insignificant 1.0000e+00 1.00000 insignificant 0.021826 4.9786e-01 lowCoverage 1.00000000 lowCoverage 0.89296 0.92490 -0.0323180 5 0.89520 0.935047 -0.0398428 9.8709e-01 1.3189e-03 weaklyHypometh 1.0000e+00 0.263789 insignificant 9.5769e-01 1.0949e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.028067 3.3044e-01 lowCoverage 1.00000000 lowCoverage 0.902041 0.83128 0.0654010 5 0.90970 0.84244 0.0672590 2.9454e-05 0.999724 weaklyHypermeth 7.0129e-04 1 weaklyHypermeth 7.2997e-02 0.9268688 insignificant 1.0000e+00 1 insignificant 0.036564 2.6930e-01 lowCoverage 1.0000000 lowCoverage 0.90204 0.92490 -0.022299 5 0.909701 0.935047 -0.0253453 9.6453e-01 7.0013e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3520e-01 7.5260e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.013329 6.2901e-01 lowCoverage 1.0000e+00 lowCoverage 0.831280 0.92490 -0.0885657 5 0.842442 0.935047 -0.092604 9.9998e-01 6.0245e-05 weaklyHypometh 1.0000e+00 2.8688e-03 weaklyHypometh 9.9473e-01 8.3801e-03 weaklyHypometh 1.0000e+00 2.7713e-01 insignificant -0.0498927 2.1600e-01 lowCoverage 1.0000000 lowCoverage chr2 114071111 114072111 20928 ENSG00000155352 0.839353 170 6 0.74477 208 7 0.75743 226 5 0.907596 89 6 0.954702 187 5 0.69875 113 6 0.837192 295 5 0.88831 165 5 0.879023 185 5 0.890409 158 5 0.88623 200 7 0.85326 166 5 0.845795 167 3 1.00000 16 2 0.652388 195 5 0.889010 183 5 0.893162 96 3 0.833456 170 6 0.91564 184 5 0.78959 96 7 0.98025 85 5 0.788538 71 4 0.77955 106 5 0.96036 81 5 0.856481 83 4 0.899211 200 5 0.828671 81 7 0.981685 99 5 0.83253 158 7 0.842917 177 5 0.7448773 127 7 0.74516 59 5 0.75105 230 5 0.8072615 250 7 0.695303 87 5 0.80000 29 3 0.67828 82 5 0.8399960 127 7 0.650420 163 4 0.874513 94 5 0.701082 117 6 0.811791 216 4 0.744755 97 2 0.863003 0.74606 0.82738 0.872985 0.902213 0.84151 0.858089 0.858144 0.869747 0.91560 0.81995 0.87088 0.967740 0.94540 0.904200 0.81141 0.841940 0.78866 0.840926 0.927526 0.97499 0.859990 0.85617 0.917362 0.832343 0.859918 0.778370 0.96422 0.804547 0.863030 0.790476 0.87725 0.69776 0.664722 0.644286 0.72481 0.73042 0.769106 0.795567 0.785099 0.811963 0.833894 0.85370 3 0.871481 0.881908 -0.0112103 5 0.83572 0.901847 -0.06612765 9.1345e-01 0.278939 insignificant 1.0000e+00 1 insignificant 0.9795128 0.190082 insignificant 1 1 insignificant -0.00554962 0.859813 insignificant 1 insignificant 0.871630 0.74907 0.1162054 5 0.83632 0.68811 0.148206 2.1484e-08 0.88012794 weaklyHypermeth 7.1613e-07 1.00000 weaklyHypermeth 7.1888e-03 0.82720501 weaklyHypermeth 1.5628e-01 1.00000 insignificant 0.085822 2.3861e-02 weaklyHypermeth 0.61719903 insignificant 0.87163 0.76710 0.0583588 4 0.83632 0.715545 0.1207713 1.9111e-02 2.4445e-01 lowCoverage 5.6208e-01 1.000000 lowCoverage 2.0090e-02 7.2505e-01 lowCoverage 8.3710e-01 1.00000000 lowCoverage 0.091291 8.3239e-02 lowCoverage 1.00000000 lowCoverage 0.881279 0.74907 0.1152886 5 0.87731 0.68811 0.1891989 1.8049e-05 0.929121 weaklyHypermeth 4.7498e-04 1 weaklyHypermeth 8.5001e-03 0.9834510 weaklyHypermeth 1.7990e-01 1 insignificant 0.091372 2.5621e-02 weaklyHypermeth 0.7535614 insignificant 0.88128 0.76710 0.048106 4 0.877309 0.715545 0.1617642 1.2410e-01 7.9967e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2113e-02 9.0859e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.096840 7.5184e-02 lowCoverage 1.0000e+00 lowCoverage 0.749068 0.76710 -0.1057830 4 0.688110 0.715545 -0.027435 6.4132e-01 6.2756e-03 lowCoverage 1.0000e+00 1.3643e-01 lowCoverage 5.7305e-01 1.2733e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0054688 9.1188e-01 lowCoverage 1.0000000 lowCoverage chr2 114072238 114073238 20929 ENSG00000155352 0.875853 312 7 0.73679 330 7 0.83428 229 7 0.891930 219 7 0.817552 146 7 0.83097 342 7 0.770413 237 7 0.88373 343 7 0.714694 216 7 0.874221 236 7 0.74183 440 7 0.80340 75 5 0.885106 311 7 0.86358 112 7 0.888345 236 7 0.724585 55 5 0.438462 31 3 0.876493 347 7 0.73864 498 7 0.89274 321 7 0.83501 162 7 0.751932 158 7 0.87724 253 7 0.87107 220 7 0.832513 311 7 0.847692 277 7 0.895652 268 7 0.830729 109 7 0.86371 378 7 0.905861 236 7 0.8963654 234 7 0.88045 344 7 0.74619 337 7 0.7470027 321 7 0.748831 373 7 0.67511 54 3 0.67818 171 7 0.6321009 475 7 0.807819 361 7 0.831517 235 7 0.721812 227 6 0.902176 297 7 0.885825 254 7 0.900809 0.77888 0.83199 0.911590 0.846983 0.86954 0.800777 0.893713 0.843199 0.82582 0.87318 0.81483 0.899665 0.87618 0.902902 0.76570 0.629526 0.89745 0.875676 0.907347 0.85806 0.853302 0.89783 0.905006 0.864704 0.862178 0.904524 0.84311 0.869111 0.905021 0.912261 0.89823 0.76748 0.740954 0.785991 0.73081 0.79331 0.623124 0.853334 0.869215 0.788308 0.896003 0.90221 7 0.862562 0.879322 -0.0162491 7 0.80065 0.802824 -0.00216976 9.8538e-01 0.154347 insignificant 1.0000e+00 1 insignificant 0.9945407 0.097669 insignificant 1 1 insignificant -0.05317227 0.058098 insignificant 1 insignificant 0.862679 0.71288 0.1479649 7 0.81332 0.62468 0.188639 1.6792e-13 0.97577116 weaklyHypermeth 9.8774e-12 1.00000 weaklyHypermeth 4.5444e-04 0.93077312 weaklyHypermeth 1.5148e-02 1.00000 weaklyHypermeth 0.099611 4.9846e-03 weaklyHypermeth 0.18821959 insignificant 0.86299 0.87118 0.0024950 7 0.87850 0.872019 0.0064858 8.1437e-01 8.2740e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4046e-01 8.4465e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.025650 5.3715e-01 insignificant 1.00000000 insignificant 0.879076 0.71288 0.1660046 7 0.75353 0.62468 0.1288515 2.8844e-12 0.999373 weaklyHypermeth 2.0643e-10 1 weaklyHypermeth 5.8297e-05 0.9974050 weaklyHypermeth 3.6436e-03 1 weaklyHypermeth 0.152783 1.3205e-04 weaklyHypermeth 0.0110045 weaklyHypermeth 0.87946 0.87109 0.016793 7 0.878530 0.856021 0.0225087 4.1974e-01 9.3520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1746e-01 9.2726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.027523 4.5701e-01 insignificant 1.0000e+00 insignificant 0.713295 0.87099 -0.1484413 7 0.713918 0.835453 -0.121535 7.6249e-01 3.8188e-06 weaklyHypometh 1.0000e+00 2.7277e-04 weaklyHypometh 8.6502e-01 2.2384e-03 weaklyHypometh 1.0000e+00 1.2435e-01 insignificant -0.1252603 1.3170e-02 weaklyHypometh 0.5127660 insignificant chr2 120908374 120909374 21299 INHBB ENSG00000163083 0.51662 669 12 0.52916 452 12 0.69802 313 12 0.508427 510 12 0.632364 273 12 0.68232 569 12 0.696433 418 12 0.67385 295 12 0.703258 379 12 0.671676 331 12 0.72048 377 12 0.73439 265 9 0.488491 454 12 0.79606 62 6 0.565194 470 12 0.623536 195 9 0.58084 296 9 0.58307 834 12 0.777632 282 12 0.46739 581 12 0.58417 137 10 0.61752 216 12 0.67047 394 12 0.530665 197 12 0.70097 436 12 0.51597 568 12 0.56655 271 12 0.652759 168 11 0.57846 400 12 0.54045 573 12 0.56901 536 12 0.79656 608 12 0.14084 511 12 0.10676 414 12 0.20000 311 9 0.23987 343 12 0.13355 224 12 0.22269 643 12 0.53032 750 12 0.64095 686 12 0.446461 522 12 0.65630 792 12 0.5620512 684 12 0.49001 0.551359 0.67954 0.48662 0.59543 0.67779 0.67664 0.65558 0.67624 0.631043 0.72247 0.74011 0.43300 0.61421 0.536407 0.68683 0.562938 0.56317 0.768013 0.396076 0.558953 0.551478 0.64134 0.553854 0.679516 0.495497 0.611192 0.620012 0.56407 0.502456 0.550316 0.79070 0.097929 0.084827 0.173513 0.16410 0.09458 0.180371 0.465237 0.574257 0.401491 0.626126 0.510088 12 0.60511 0.60471 -0.0063805 12 0.67265 0.60653 0.0661242 0.932294 0.472715 insignificant 1 1 insignificant 0.57865 0.927028 insignificant 1 1 insignificant 0.0221646 0.49762 insignificant 1 insignificant 0.60492 0.18847 0.4230244 12 0.60571 0.18452 0.4211824 6.0620e-55 1.0000e+00 hypermethylated 6.0620e-52 1.000000 hypermethylated 2.0010e-25 1.000000 hypermethylated 2.0010e-22 1 hypermethylated 0.4585101 1.3375e-10 hypermethylated 6.6875e-08 hypermethylated 0.60492 0.556494 0.0561178 12 0.60571 0.56958 0.0361293 5.5969e-02 0.676156 insignificant 1.0000e+00 1 insignificant 5.7361e-03 0.9076585 weaklyHypermeth 4.0972e-01 1 insignificant 0.0652429 0.18343859 insignificant 1.0000 insignificant 0.60499 0.18847 0.4349983 12 0.60925 0.18452 0.4247287 4.7002e-47 1.0000e+00 hypermethylated 4.7002e-44 1.00000000 hypermethylated 7.1433e-21 1.000000 hypermethylated 7.1433e-18 1 hypermethylated 0.436345 1.4315e-09 hypermethylated 1.4315e-06 hypermethylated 0.60499 0.556494 0.0659149 12 0.60925 0.56958 0.0396756 5.5210e-03 0.845249 weaklyHypermeth 2.9058e-01 1 insignificant 3.2141e-02 0.901178 weaklyHypermeth 1.0000e+00 1 insignificant 0.0430783 0.3694085 insignificant 1.00000 insignificant 0.18847 0.556494 -0.367396 12 0.18452 0.56958 -0.3850531 1.0000e+00 1.8654e-28 hypomethylated 1.0000e+00 1.8654e-25 hypomethylated 1.0000e+00 3.0451e-14 hypomethylated 1.0000000 3.0451e-11 hypomethylated -0.393267 6.9674e-05 hypomethylated 0.069674 hypomethylated chr2 120915173 120916173 21300 INHBB ENSG00000163083 0.21679 215 6 0.23882 216 9 0.32237 214 9 0.087931 139 6 0.059696 100 6 0.43112 340 8 0.079336 140 6 0.13506 192 6 0.074634 195 6 0.033348 188 6 0.33106 141 6 0.11297 119 6 0.042572 196 6 0.09236 114 6 0.032407 152 6 0.073913 98 6 0.12381 33 3 0.14301 177 6 0.068909 136 6 0.22371 316 8 0.18755 98 8 0.15186 160 6 0.39690 163 8 0.021925 159 6 0.22069 78 6 0.11139 275 9 0.22338 208 6 0.043986 196 7 0.16377 105 6 0.13221 295 9 0.12431 234 9 0.38017 260 8 0.33763 215 9 0.21893 59 6 0.40306 201 6 0.00000 30 2 0.29788 146 6 0.36752 186 8 0.20062 219 6 0.13533 144 7 0.010101 100 4 0.15021 149 6 0.0059728 163 6 0.10743 0.065604 0.16433 0.05925 0.10691 0.19434 0.10260 0.07948 0.12086 0.055699 0.25405 0.13981 0.03002 0.11696 0.052151 0.06589 0.074194 0.08840 0.064584 0.063834 0.095349 0.031148 0.18774 0.035105 0.067508 0.025838 0.069303 0.032292 0.04334 0.042693 0.063885 0.15961 0.050372 0.160771 0.026244 0.00000 0.13418 0.020844 0.031275 0.053846 0.013196 0.044292 0.014268 4 0.11283 0.10448 0.0315580 6 0.26739 0.21524 0.0521482 0.025948 0.873330 weaklyHypermeth 1 1 insignificant 0.18101 0.678521 insignificant 1 1 insignificant -0.0336559 0.42667 insignificant 1 insignificant 0.11283 0.19355 0.0039440 6 0.26739 0.41764 -0.1502478 3.9247e-01 6.2047e-05 inconclusive 1.0000e+00 0.062047 inconclusive 5.0215e-01 0.031749 inconclusive 1.0000e+00 1 insignificant -0.1246465 9.7812e-02 insignificant 1.0000e+00 insignificant 0.11283 0.036129 0.0758342 6 0.26739 0.12755 0.1398383 8.9583e-05 0.999990 weaklyHypermeth 9.9537e-03 1 weaklyHypermeth 8.2261e-04 0.9999996 weaklyHypermeth 9.4715e-02 1 weaklyHypermeth 0.0457442 0.35598996 insignificant 1.0000 insignificant 0.10448 0.19355 -0.0674031 7 0.21524 0.41764 -0.2023960 8.3711e-01 7.9232e-07 weaklyHypometh 1.0000e+00 0.00079232 weaklyHypometh 6.4867e-01 0.050886 insignificant 1.0000e+00 1 insignificant -0.090991 2.2045e-01 insignificant 1.0000e+00 insignificant 0.10448 0.036129 0.0450153 6 0.21524 0.12755 0.0876901 8.9819e-04 0.975865 weaklyHypermeth 6.9091e-02 1 weaklyHypermeth 7.2101e-05 0.992822 weaklyHypermeth 1.4420e-02 1 weaklyHypermeth 0.0794001 0.1536849 insignificant 1.00000 insignificant 0.19355 0.036129 0.069704 6 0.41764 0.12755 0.2900861 1.0181e-07 9.9882e-01 weaklyHypermeth 5.0906e-05 1.0000e+00 weaklyHypermeth 3.7932e-03 9.9997e-01 weaklyHypermeth 0.7712847 1.0000e+00 insignificant 0.170391 4.3760e-02 weaklyHypermeth 1.000000 insignificant chr2 122751916 122752916 21353 TSN ENSG00000211460 0.80652 281 9 0.59131 162 9 0.76766 80 5 0.684545 222 9 0.773942 75 9 0.76676 335 9 0.705372 109 9 0.66337 124 7 0.587149 119 9 0.714161 107 9 0.76800 344 10 0.72569 86 8 0.856540 181 9 0.63265 66 6 0.660358 150 9 0.588254 57 3 0.42857 50 4 0.85939 226 9 0.860840 144 9 0.71246 190 9 0.72913 53 3 0.85520 71 8 0.74576 165 9 0.748918 67 7 0.81301 91 9 0.79460 218 9 0.82668 82 6 0.736014 52 3 0.64791 113 9 0.64767 236 9 0.71886 184 9 0.66677 365 9 0.62534 167 9 0.69926 144 9 0.68141 145 9 0.73104 57 4 0.68887 75 6 0.60121 223 9 0.68440 245 9 0.76567 266 10 0.812989 197 9 0.71449 184 8 0.7774935 259 9 0.82049 0.639735 0.83613 0.81756 0.80020 0.84086 0.76491 0.76301 0.68836 0.763971 0.78325 0.77915 0.84468 0.78350 0.821035 0.66266 0.715067 0.86709 0.870690 0.816970 0.795923 0.886280 0.74983 0.849743 0.806287 0.811618 0.829299 0.769840 0.69408 0.800991 0.737253 0.76041 0.668598 0.734731 0.730838 0.76308 0.71122 0.771010 0.827966 0.806736 0.838918 0.785527 0.810559 3 0.77345 0.76783 0.0117230 9 0.67526 0.73533 -0.0600657 0.310814 0.451050 insignificant 1 1 insignificant 0.61916 0.595471 insignificant 1 1 insignificant -0.0365319 0.25349 insignificant 1 insignificant 0.77317 0.72133 0.0614393 9 0.67025 0.61055 0.0596983 7.2521e-03 9.9994e-01 weaklyHypermeth 1.6482e-01 1.000000 insignificant 3.1479e-03 0.999979 weaklyHypermeth 1.8517e-01 1 insignificant 0.0364902 2.5858e-01 insignificant 1.0000e+00 insignificant 0.77341 0.797567 -0.0260682 9 0.71812 0.71457 0.0035557 9.3186e-01 0.297098 insignificant 1.0000e+00 1 insignificant 8.8408e-01 0.4957792 insignificant 1.0000e+00 1 insignificant -0.0433304 0.21548017 insignificant 1.0000 insignificant 0.76783 0.72222 0.0481410 9 0.73533 0.65416 0.0811711 8.9166e-04 9.6171e-01 weaklyHypermeth 2.7020e-02 1.00000000 weaklyHypermeth 5.4002e-03 0.987058 weaklyHypermeth 2.5715e-01 1 insignificant 0.073022 2.1049e-02 weaklyHypermeth 1.0000e+00 insignificant 0.76800 0.799652 -0.0352795 9 0.74061 0.76953 -0.0289206 9.8246e-01 0.120949 insignificant 1.0000e+00 1 insignificant 9.1577e-01 0.543906 insignificant 1.0000e+00 1 insignificant -0.0067986 0.8270916 insignificant 1.00000 insignificant 0.72099 0.797567 -0.085920 9 0.58273 0.71457 -0.1318354 1.0000e+00 3.5829e-03 weaklyHypometh 1.0000e+00 1.7876e-01 insignificant 1.0000e+00 9.2632e-04 weaklyHypometh 1.0000000 1.3233e-01 insignificant -0.079821 2.8732e-02 weaklyHypometh 1.000000 insignificant chr2 128691543 128692543 21561 UGGT1 ENSG00000136731 0.71319 175 6 0.53083 71 5 0.60069 139 6 0.752767 149 6 0.732456 69 5 0.72175 250 6 0.593411 110 6 0.71571 155 6 0.738868 66 5 0.882251 43 4 0.73027 199 6 0.64138 81 6 0.748737 79 6 0.71429 30 3 0.656376 107 6 0.705260 65 6 0.54801 53 4 0.57738 83 5 0.700449 137 6 0.74133 230 6 0.74667 60 5 0.60562 72 6 0.79649 100 6 0.584064 90 4 0.83016 54 6 0.74255 178 6 0.73673 51 3 0.685185 41 3 0.64288 64 5 0.62894 164 6 0.68859 153 6 0.77696 238 6 0.65737 92 5 0.57758 90 6 0.59969 255 6 0.70106 60 4 0.67752 195 5 0.49085 151 6 0.78556 154 6 0.69754 137 5 0.715416 167 6 0.79026 160 6 0.6234104 167 6 0.74933 0.642006 0.63356 0.74799 0.73646 0.77281 0.59988 0.72646 0.72439 0.817153 0.75432 0.66893 0.76515 0.76295 0.692583 0.72237 0.709784 0.68108 0.705318 0.753599 0.768986 0.757835 0.81184 0.631276 0.834829 0.753431 0.842460 0.822061 0.69033 0.752798 0.756337 0.73441 0.667812 0.602948 0.669730 0.82701 0.70014 0.637268 0.805495 0.769111 0.747287 0.810592 0.715581 4 0.73330 0.77154 -0.0320175 6 0.66655 0.70686 -0.0403147 0.963801 0.019943 weaklyHypometh 1 1 insignificant 0.71824 0.028077 weaklyHypometh 1 1 insignificant -0.0181319 0.54463 insignificant 1 insignificant 0.73330 0.72954 0.0576165 6 0.66655 0.55215 0.1144016 1.8577e-03 9.5234e-01 weaklyHypermeth 4.7634e-02 1.000000 weaklyHypermeth 8.6667e-02 0.936555 insignificant 1.0000e+00 1 insignificant 0.0699244 9.0828e-02 insignificant 1.0000e+00 insignificant 0.73392 0.719745 -0.0371862 6 0.69431 0.71894 -0.0246305 7.8119e-01 0.035343 weaklyHypometh 1.0000e+00 1 insignificant 9.8510e-01 0.0076223 weaklyHypometh 1.0000e+00 1 insignificant -0.0351652 0.36185887 insignificant 1.0000 insignificant 0.77154 0.72954 0.0787048 6 0.70686 0.55215 0.1547163 1.8413e-03 9.9865e-01 weaklyHypermeth 4.8456e-02 1.00000000 weaklyHypermeth 4.1243e-02 0.998969 weaklyHypermeth 1.0000e+00 1 insignificant 0.088056 4.6939e-02 weaklyHypermeth 1.0000e+00 insignificant 0.77240 0.719745 0.0030810 6 0.74134 0.71894 0.0224034 6.4942e-01 0.498459 insignificant 1.0000e+00 1 insignificant 8.4321e-01 0.291510 insignificant 1.0000e+00 1 insignificant -0.0170333 0.6677666 insignificant 1.00000 insignificant 0.73040 0.719745 -0.076493 6 0.64417 0.71894 -0.0747656 9.6773e-01 9.0258e-03 weaklyHypometh 1.0000e+00 3.1123e-01 insignificant 9.9669e-01 1.4277e-02 weaklyHypometh 1.0000000 7.1386e-01 insignificant -0.105090 4.1726e-02 weaklyHypometh 1.000000 insignificant chr2 130657417 130658417 21592 SMPD4 ENSG00000136699 0.88874 235 6 0.79482 521 9 0.82747 273 9 0.858800 226 8 0.878346 226 6 0.95787 291 3 0.916793 393 6 0.85253 221 6 0.914815 235 3 0.638775 229 4 0.93985 279 6 0.87000 165 6 0.792105 283 3 0.73860 159 3 0.814411 348 6 0.925907 214 6 1.00000 204 3 0.80404 288 3 0.900056 594 6 0.71082 334 5 0.88848 128 6 0.35364 114 6 0.93491 281 8 0.816698 111 6 0.88065 90 6 0.79613 531 9 0.86443 248 6 0.761535 105 5 0.85782 557 4 0.85635 624 9 0.73934 613 9 0.95328 255 8 0.73393 310 9 0.76052 317 6 0.90206 608 9 0.73194 38 6 0.67550 207 6 0.62219 470 7 0.18518 404 6 0.45921 286 6 0.149517 202 3 0.58119 243 6 0.4789216 174 5 0.79703 0.870770 0.87897 0.77880 0.85990 0.88417 0.92012 0.83168 0.84402 0.871019 0.90863 0.76223 0.62137 0.79727 0.752672 0.86401 0.988078 0.66972 0.884865 0.733211 0.896129 0.306152 0.92943 0.838726 0.860014 0.812724 0.775081 0.861587 0.86570 0.862584 0.733548 0.93257 0.831100 0.726999 0.790269 0.75815 0.76941 0.909201 0.122386 0.251619 0.112572 0.329868 0.375101 3 0.82721 0.81898 0.0081979 6 0.82896 0.81803 0.0109309 0.433434 0.719862 insignificant 1 1 insignificant 0.24766 0.898026 insignificant 1 1 insignificant 0.0426344 0.40145 insignificant 1 insignificant 0.82721 0.80615 0.0141021 6 0.82896 0.76522 0.0637479 5.2671e-02 6.0990e-01 insignificant 1.0000e+00 1.000000 insignificant 6.1626e-03 0.795750 weaklyHypermeth 2.2824e-01 1 insignificant 0.1135468 3.1444e-02 weaklyHypermeth 1.0000e+00 insignificant 0.82721 0.224599 0.6036035 6 0.82896 0.39167 0.4372897 6.3159e-38 1.000000 hypermethylated 6.3159e-35 1 hypermethylated 3.2807e-16 1.0000000 hypermethylated 3.2807e-13 1 hypermethylated 0.4804346 0.00404976 weaklyHypermeth 1.0000 insignificant 0.81898 0.80615 0.0099256 7 0.81803 0.76522 0.0528170 8.9746e-02 4.3270e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2217e-02 0.675030 weaklyHypermeth 8.2609e-01 1 insignificant 0.070912 2.5179e-01 insignificant 1.0000e+00 insignificant 0.81898 0.224599 0.5947282 6 0.81803 0.39167 0.4263588 1.2110e-26 1.000000 hypermethylated 1.2110e-23 1 hypermethylated 3.1872e-12 1.000000 hypermethylated 3.1872e-09 1 hypermethylated 0.4378002 0.0035025 weaklyHypermeth 0.87563 insignificant 0.80615 0.224599 0.587281 6 0.76522 0.39167 0.3735418 4.1037e-14 9.9993e-01 hypermethylated 4.1037e-11 1.0000e+00 hypermethylated 3.8868e-06 9.9993e-01 hypermethylated 0.0038868 1.0000e+00 hypermethylated 0.366888 9.1378e-03 weaklyHypermeth 0.702909 insignificant chr2 131669303 131670303 21605 PLEKHB2 ENSG00000115762 0.71796 241 5 0.57374 53 5 0.64647 90 5 0.701942 85 5 0.590909 54 5 0.63912 136 5 0.546324 83 5 0.63223 47 5 0.652941 83 5 0.647273 53 5 0.68465 167 5 0.53056 42 5 0.750585 64 5 NA 0 0 0.723640 92 5 0.564072 45 5 0.56970 56 5 0.72432 156 5 0.708333 72 5 0.67978 130 5 0.68333 20 1 0.75476 38 5 0.69758 140 5 0.666667 21 1 0.80000 26 5 0.67201 97 5 0.73947 33 1 0.770000 34 1 0.49917 36 4 0.65440 78 5 0.60379 61 5 0.69476 185 5 0.54175 67 5 0.53102 66 5 0.66234 111 5 0.75985 53 5 0.74286 30 2 0.65523 72 5 0.68948 188 5 0.71719 135 5 0.678577 174 5 0.67185 174 5 0.7079425 179 5 0.74584 0.638332 0.63839 0.74936 0.64047 0.70795 0.60082 0.70313 0.70594 0.679892 0.72135 0.61488 0.78551 NA 0.763890 0.62748 0.581150 0.78447 0.788418 0.729599 0.789548 0.762510 0.74077 0.641243 0.845763 0.738034 0.767618 0.772034 0.59004 0.734448 0.711190 0.75136 0.584937 0.531445 0.644902 0.76852 0.71913 0.695332 0.736931 0.743680 0.731301 0.709791 0.771430 1 0.66324 0.71001 -0.0152635 5 0.66746 0.68040 -0.0129363 0.829155 0.080038 insignificant 1 1 insignificant 0.99287 0.037291 weaklyHypometh 1 1 insignificant -0.0397730 0.16921 lowCoverage 1 lowCoverage 0.66324 0.64912 0.0347298 5 0.66746 0.64028 0.0271801 2.4464e-02 6.9322e-01 weaklyHypermeth 5.3182e-01 1.000000 insignificant 1.8884e-01 0.452276 insignificant 1.0000e+00 1 insignificant -0.0022863 9.5860e-01 lowCoverage 1.0000e+00 lowCoverage 0.66324 0.660000 -0.0237080 5 0.66746 0.69142 -0.0239629 9.4129e-01 0.277174 insignificant 1.0000e+00 1 insignificant 9.7723e-01 0.1866443 insignificant 1.0000e+00 1 insignificant -0.0464514 0.01578025 lowCoverage 1.0000 lowCoverage 0.71001 0.64912 0.0571168 5 0.68040 0.64028 0.0401164 4.3196e-03 7.2512e-01 weaklyHypermeth 1.0536e-01 1.00000000 insignificant 3.8875e-02 0.862629 weaklyHypermeth 9.7186e-01 1 insignificant 0.037487 4.3507e-01 lowCoverage 1.0000e+00 lowCoverage 0.71001 0.660000 -0.0092076 5 0.68040 0.69142 -0.0110267 6.3238e-01 0.491420 insignificant 1.0000e+00 1 insignificant 5.2479e-01 0.665034 insignificant 1.0000e+00 1 insignificant -0.0066784 0.7913305 lowCoverage 1.00000 lowCoverage 0.64912 0.660000 -0.058566 5 0.64028 0.69142 -0.0511430 8.9713e-01 4.9018e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7368e-01 2.6545e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.044165 3.2003e-01 lowCoverage 1.000000 lowCoverage chr2 131964273 131965273 21616 TUBA3D ENSG00000075886 0.89297 268 7 0.87110 162 9 0.85721 130 8 0.924481 242 6 0.783842 89 8 0.93465 226 9 0.887739 166 9 0.76130 122 5 0.714526 97 7 0.750790 67 7 0.92175 158 8 0.83438 81 7 0.686042 62 4 0.83214 57 4 0.772727 81 7 0.770192 59 4 0.68333 13 1 0.81715 227 5 0.853824 121 8 0.88855 222 6 0.82798 86 6 0.74716 82 4 0.86373 142 7 0.843547 75 7 0.95775 179 5 0.82805 181 9 0.84196 118 7 0.796968 59 5 0.88792 165 5 0.94682 159 8 0.89465 218 9 0.93944 232 7 0.82795 178 8 0.73714 156 7 0.91031 410 7 0.79702 110 5 0.71539 181 8 0.83668 247 9 0.78691 196 6 0.56367 191 6 0.524018 188 6 0.51718 238 4 0.9051502 186 6 0.86279 0.847270 0.80067 0.90630 0.77345 0.88538 0.84456 0.84880 0.76369 0.726308 0.90128 0.80583 0.74642 0.78211 0.790679 0.83420 0.730661 0.80220 0.886219 0.883864 0.915420 0.647463 0.88937 0.740342 0.922220 0.941489 0.807516 0.878407 0.81646 0.903039 0.865992 0.91241 0.771851 0.588928 0.775194 0.58091 0.66878 0.964408 0.741754 0.722958 0.712718 0.786341 0.747193 3 0.84862 0.86702 -0.0213036 8 0.87619 0.88074 -0.0045558 0.715020 0.185542 insignificant 1 1 insignificant 0.88248 0.028477 weaklyHypometh 1 1 insignificant -0.0427292 0.10357 insignificant 1 insignificant 0.84862 0.76677 0.0793757 9 0.87619 0.85940 0.0167871 1.5700e-01 8.5059e-01 insignificant 1.0000e+00 1.000000 insignificant 1.2324e-01 0.477239 insignificant 1.0000e+00 1 insignificant 0.0178531 6.1137e-01 insignificant 1.0000e+00 insignificant 0.84851 0.708709 0.1147204 6 0.86381 0.71473 0.1490797 5.8329e-09 0.777077 weaklyHypermeth 1.4582e-06 1 weaklyHypermeth 1.3671e-05 0.6020929 weaklyHypermeth 4.5569e-03 1 weaklyHypermeth 0.1625503 0.10805746 insignificant 1.0000 insignificant 0.86702 0.76677 0.1071232 8 0.88074 0.85940 0.0213429 1.8917e-01 9.5318e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.0386e-01 0.948524 insignificant 1.0000e+00 1 insignificant 0.060582 1.1125e-01 insignificant 1.0000e+00 insignificant 0.86663 0.708709 0.1385407 5 0.86882 0.71473 0.1540910 1.8757e-05 0.922582 weaklyHypermeth 2.0841e-03 1 weaklyHypermeth 1.8574e-04 0.992456 weaklyHypermeth 2.6535e-02 1 weaklyHypermeth 0.2052795 0.0582455 insignificant 1.00000 insignificant 0.76659 0.708709 0.038533 6 0.84534 0.71473 0.1306139 1.2400e-01 9.5019e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3461e-01 9.8795e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.144697 1.4475e-01 insignificant 1.000000 insignificant chr2 131979921 131980921 21617 ENSG00000152117 0.68727 43 5 0.61496 71 5 0.57000 32 2 0.635529 72 5 0.711111 52 5 0.70462 44 5 0.641818 57 5 0.71667 40 4 0.657143 25 3 0.750000 17 0 0.62381 64 5 0.45000 14 0 0.734167 52 3 0.67692 41 3 0.642857 30 4 0.613333 28 5 0.41176 51 3 0.43452 34 4 0.660000 21 1 0.71515 32 2 0.53333 15 2 0.66667 11 0 0.65500 45 5 0.800000 13 2 0.74116 99 2 0.68627 60 5 0.57778 19 2 0.600000 16 2 0.60556 40 5 0.61046 45 2 0.66667 60 5 0.58667 42 2 0.61476 91 5 0.70000 36 4 0.62593 96 5 0.97333 151 2 0.76333 49 3 0.59231 55 2 0.67179 34 2 0.72815 67 5 0.606373 59 5 0.53333 18 1 0.6333333 60 5 0.74242 0.697192 0.64881 0.71125 0.80688 0.78205 0.73341 0.77778 0.77211 0.827381 0.70975 0.57738 0.81647 0.78205 0.712585 0.73810 0.704624 0.44855 0.750000 0.784993 0.658730 0.658730 0.75119 0.857143 0.742693 0.750078 0.532443 0.738095 0.69147 0.715764 0.777778 0.72222 0.727608 0.797619 0.744709 0.75933 0.83889 0.728938 0.664835 0.772308 0.678221 0.579365 0.662698 0 0.64268 0.77419 0.0066943 2 0.64583 0.63758 0.0082460 0.531515 0.583597 lowCoverage 1 1 lowCoverage 0.54536 0.723182 lowCoverage 1 1 lowCoverage -0.0115476 0.70956 lowCoverage 1 lowCoverage 0.64268 0.82845 -0.0068870 5 0.64583 0.64686 -0.0010283 4.5823e-01 4.1249e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.3327e-01 0.174021 insignificant 1.0000e+00 1 insignificant -0.0790282 2.4868e-01 lowCoverage 1.0000e+00 lowCoverage 0.64268 0.689076 0.0066427 5 0.64583 0.64841 -0.0025807 1.7457e-02 0.243343 weaklyHypermeth 7.2736e-01 1 insignificant 3.9996e-03 0.4760345 weaklyHypermeth 3.0766e-01 1 insignificant -0.0020154 0.96026208 lowCoverage 1.0000 lowCoverage 0.77419 0.82845 -0.0509554 2 0.63758 0.64686 -0.0092743 7.6955e-01 1.0807e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.9131e-01 0.157544 lowCoverage 1.0000e+00 1 lowCoverage -0.067481 3.1734e-01 lowCoverage 1.0000e+00 lowCoverage 0.77419 0.689076 0.0537438 2 0.63758 0.64841 -0.0108267 6.7455e-02 0.364780 lowCoverage 1.0000e+00 1 lowCoverage 6.4683e-02 0.708902 lowCoverage 1.0000e+00 1 lowCoverage 0.0095322 0.8133863 lowCoverage 1.00000 lowCoverage 0.82845 0.689076 0.054493 5 0.64686 0.64841 -0.0015524 1.2754e-04 9.6105e-02 weaklyHypermeth 4.2513e-02 1.0000e+00 weaklyHypermeth 1.8918e-03 4.3605e-01 weaklyHypermeth 0.7712847 1.0000e+00 insignificant 0.077013 2.8394e-01 lowCoverage 1.000000 lowCoverage chr2 131991352 131992352 21618 ENSG00000152117 0.90535 324 9 0.88722 279 11 0.88158 200 8 0.962584 436 11 0.963246 88 5 0.94445 469 11 0.864721 199 10 0.91844 192 11 0.953770 249 12 0.986374 155 7 0.91556 171 10 0.96505 77 4 0.950209 257 7 0.95088 107 6 0.966179 196 11 0.960027 42 3 0.90000 28 3 0.95934 618 11 0.970716 219 11 0.93475 319 11 0.92665 126 8 0.91782 180 7 0.93497 186 8 0.791918 179 7 0.94451 355 10 0.96154 221 11 0.98360 127 11 0.931019 69 6 0.95225 249 11 0.94038 353 11 0.94742 260 11 0.95311 319 11 0.91448 211 12 0.88845 195 11 0.83333 157 4 0.84231 124 6 0.87246 200 11 0.93536 287 11 0.96616 197 10 0.96753 377 11 0.968187 370 11 0.93840 329 12 0.9223350 338 11 0.90851 0.869555 0.90952 0.94277 0.93199 0.94138 0.90492 0.91766 0.87887 0.976741 0.93726 0.93742 0.90902 0.91658 0.959566 0.92895 0.938562 0.94745 0.956008 0.899007 0.873727 0.909312 0.94601 0.916272 0.929897 0.949374 0.954634 0.906746 0.91498 0.916026 0.928346 0.95785 0.890679 0.887975 0.902252 0.86842 0.90452 0.932986 0.958233 0.965253 0.969403 0.928866 0.915271 2 0.93319 0.93900 -0.0052855 11 0.94018 0.94257 -0.0023843 0.776836 0.366539 insignificant 1 1 insignificant 0.78156 0.584534 insignificant 1 1 insignificant 0.0049234 0.75711 insignificant 1 insignificant 0.93319 0.93782 -0.0011119 11 0.94018 0.92160 0.0185869 3.3742e-03 2.7425e-02 weaklyHypometh 8.2298e-02 1.000000 weaklyHypometh 1.0462e-01 0.110938 insignificant 1.0000e+00 1 insignificant 0.0559578 1.6116e-02 weaklyHypermeth 8.4821e-01 insignificant 0.93319 0.950311 -0.0176753 11 0.94018 0.94740 -0.0072129 8.0665e-01 0.081218 insignificant 1.0000e+00 1 insignificant 5.2943e-01 0.2616055 insignificant 1.0000e+00 1 insignificant -0.0155001 0.22947677 insignificant 1.0000 insignificant 0.93900 0.93782 0.0031715 11 0.94257 0.92160 0.0209712 3.1015e-02 1.3052e-01 weaklyHypermeth 6.3296e-01 1.00000000 insignificant 1.8038e-01 0.157587 insignificant 1.0000e+00 1 insignificant 0.051034 3.3889e-02 weaklyHypermeth 1.0000e+00 insignificant 0.93900 0.950311 -0.0128469 11 0.94257 0.94740 -0.0048286 5.5413e-01 0.180671 insignificant 1.0000e+00 1 insignificant 4.5918e-01 0.277088 insignificant 1.0000e+00 1 insignificant -0.0204234 0.2378340 insignificant 1.00000 insignificant 0.93782 0.950311 -0.018245 11 0.92160 0.94740 -0.0257998 1.9684e-01 2.1518e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0819e-01 3.1286e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.071458 5.5097e-03 weaklyHypometh 0.500884 insignificant chr2 131993421 131994421 21620 ENSG00000152117 0.74703 131 7 0.78062 81 6 0.71446 124 5 0.828171 167 9 0.617448 72 3 0.96832 282 8 0.981158 114 5 0.82303 90 6 0.902381 62 3 0.854988 109 3 0.91665 235 9 0.53750 51 3 0.906966 120 6 0.87000 72 5 0.984744 122 3 0.990476 49 3 NA 0 0 0.88640 164 9 0.979487 145 10 0.83025 206 6 0.84280 45 5 0.92905 113 7 0.89663 117 6 0.946970 72 3 0.84524 45 5 0.91402 150 11 0.83749 124 4 0.791667 35 3 0.94836 136 6 0.96420 181 12 0.93236 147 9 0.92825 233 8 0.87500 66 3 0.99415 135 9 0.84620 218 5 0.92687 113 9 0.90868 78 6 0.93622 184 10 0.97861 237 6 0.96323 142 7 0.935658 117 7 0.98376 148 8 0.9647585 195 9 0.90195 0.882770 0.94165 0.95659 0.93477 0.97137 0.94990 0.89956 0.86332 0.923605 0.91832 0.93333 0.96537 0.94676 0.972956 0.98234 NA 0.86207 0.918919 0.921212 1.000000 0.948523 0.93565 0.838403 0.952896 0.902703 0.963315 0.871171 0.93525 0.977928 0.942765 0.95831 1.000000 0.982646 0.697849 0.86469 0.82979 0.980695 0.972612 0.934254 0.923189 0.976834 0.915423 3 0.92523 0.93133 -0.0088952 6 0.90736 0.92518 -0.0178189 0.877179 0.332697 insignificant 1 1 insignificant 0.99335 0.101757 insignificant 1 1 insignificant -0.0496606 0.14378 insignificant 1 insignificant 0.92523 0.88791 0.0401973 6 0.90736 0.92673 -0.0193749 1.1671e-01 2.2055e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9839e-01 0.018808 inconclusive 1.0000e+00 1 insignificant -0.0660958 7.8257e-02 insignificant 1.0000e+00 insignificant 0.92972 0.955900 -0.0180352 5 0.92448 0.97151 -0.0470381 9.9302e-01 0.080453 insignificant 1.0000e+00 1 insignificant 9.7352e-01 0.0469289 weaklyHypometh 1.0000e+00 1 insignificant -0.1167782 0.00088728 weaklyHypometh 0.6198 insignificant 0.93133 0.88791 0.0418556 7 0.92518 0.92673 -0.0015561 3.2426e-01 3.8417e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.7524e-01 0.343756 insignificant 1.0000e+00 1 insignificant -0.016435 5.4575e-01 insignificant 1.0000e+00 insignificant 0.93548 0.955900 -0.0173357 5 0.93865 0.97151 -0.0328602 9.9939e-01 0.079055 insignificant 1.0000e+00 1 insignificant 9.8282e-01 0.360915 insignificant 1.0000e+00 1 insignificant -0.0671176 0.0020405 weaklyHypometh 0.68016 insignificant 0.88497 0.955900 -0.079369 6 0.91947 0.97151 -0.0520418 6.1341e-01 1.6201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4058e-01 7.6902e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.050682 6.2714e-02 insignificant 1.000000 insignificant chr2 132009614 132010614 21622 CCDC74A ENSG00000163040 0.76881 228 7 0.87321 200 5 0.81706 131 5 0.911647 216 7 0.702778 81 4 0.81186 214 7 0.866494 138 5 0.89067 114 5 0.769354 74 5 0.712615 54 5 0.87932 169 5 0.98182 39 4 0.805747 64 3 0.59445 57 5 0.927971 53 4 0.964286 19 2 NA 0 0 0.77511 213 7 0.940986 142 6 0.84563 191 7 0.77922 74 4 0.97931 98 2 0.87361 125 7 0.861966 86 5 0.77924 382 4 0.89482 174 7 0.84549 78 5 0.987500 44 4 0.89060 130 5 0.84169 182 6 0.90654 155 6 0.91429 195 7 0.77520 202 6 0.78024 262 5 0.49211 312 7 0.69901 223 5 0.71810 138 5 0.70271 263 7 0.86161 292 7 0.84046 236 7 0.740270 147 6 0.94574 248 5 0.8714899 151 6 0.89166 0.843905 0.81840 0.90992 0.86660 0.88760 0.88959 0.94129 0.91567 0.878328 0.92326 0.97222 0.88771 0.84210 0.899811 0.95589 NA 0.85143 0.941345 0.902679 0.958333 0.967465 0.92786 0.883148 0.896631 0.879555 0.912442 0.966319 0.89406 0.932794 0.932494 0.92448 0.757998 0.693414 0.749123 0.86292 0.78947 0.707848 0.857149 0.863367 0.887541 0.932477 0.939454 2 0.87704 0.90581 -0.0249305 5 0.80968 0.91019 -0.1005129 0.997945 0.025823 weaklyHypometh 1 1 insignificant 0.99447 0.091972 insignificant 1 1 insignificant -0.0458476 0.13102 lowCoverage 1 lowCoverage 0.87604 0.71000 0.1545024 7 0.69774 0.49159 0.2061487 2.8276e-08 1.0000e+00 weaklyHypermeth 1.6633e-06 1.000000 weaklyHypermeth 1.5359e-03 0.999732 weaklyHypermeth 9.5996e-02 1 weaklyHypermeth 0.1391154 2.1110e-02 lowCoverage 9.3131e-01 lowCoverage 0.87741 0.884544 0.0060847 7 0.82218 0.74988 0.0722988 2.7535e-01 0.829274 insignificant 1.0000e+00 1 insignificant 7.1488e-01 0.9202110 insignificant 1.0000e+00 1 insignificant -0.0182391 0.66098672 lowCoverage 1.0000 lowCoverage 0.90581 0.71102 0.1638272 5 0.91019 0.61449 0.2956987 9.1258e-09 1.0000e+00 weaklyHypermeth 8.2962e-07 1.00000000 weaklyHypermeth 1.4749e-05 0.999982 weaklyHypermeth 2.1070e-03 1 weaklyHypermeth 0.184963 5.6234e-03 weaklyHypermeth 4.3257e-01 insignificant 0.90576 0.885368 0.0318955 5 0.89736 0.85700 0.0403563 2.5635e-02 0.988864 weaklyHypermeth 1.0000e+00 1 insignificant 2.2184e-01 0.985943 insignificant 1.0000e+00 1 insignificant 0.0276086 0.4926782 insignificant 1.00000 insignificant 0.71102 0.884544 -0.143845 7 0.61449 0.74988 -0.1353870 9.9882e-01 1.9484e-03 weaklyHypometh 1.0000e+00 1.0255e-01 insignificant 9.9736e-01 3.1016e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.157354 1.7964e-02 weaklyHypometh 1.000000 insignificant chr2 135502422 135503422 21818 YSK4 ENSG00000176601 0.67718 172 8 0.65963 216 8 0.54924 79 8 0.790763 163 8 0.676761 142 8 0.66170 194 8 0.651306 111 7 0.60904 162 8 0.721230 86 5 0.789629 104 8 0.55899 246 8 0.62946 48 4 0.827990 169 8 0.73044 118 8 0.714759 143 8 0.836407 91 5 0.88611 59 3 0.64787 112 6 0.701457 138 8 0.74061 133 6 0.76786 32 2 0.56250 10 0 0.66723 139 6 0.625316 58 5 0.80784 92 7 0.77364 164 8 0.74106 102 7 0.652083 35 3 0.69749 161 8 0.71688 149 6 0.64975 166 6 0.74219 148 8 0.58229 169 8 0.62733 151 8 0.65582 141 8 0.47917 16 0 0.43579 123 7 0.62454 160 5 0.71383 192 8 0.75402 161 7 0.756603 165 8 0.75625 233 5 0.6620009 207 8 0.65382 0.590267 0.61098 0.76535 0.68380 0.62543 0.56308 0.69768 0.71629 0.759636 0.64767 0.62707 0.78529 0.74117 0.684314 0.77174 0.823188 0.71322 0.701592 0.742232 0.746230 0.630435 0.64781 0.679348 0.788435 0.744837 0.795284 0.681522 0.67891 0.634396 0.641953 0.71316 0.656843 0.640318 0.614308 0.54710 0.57010 0.673750 0.703211 0.738262 0.703773 0.736643 0.674438 2 0.69139 0.69506 -0.0152187 8 0.68594 0.68963 -0.0036888 0.626897 0.010155 weaklyHypometh 1 1 insignificant 0.91592 0.045912 weaklyHypometh 1 1 insignificant 0.0027087 0.92569 insignificant 1 insignificant 0.69139 0.62500 0.0592628 7 0.68594 0.55821 0.1277369 7.1722e-05 9.9474e-01 weaklyHypermeth 2.3907e-03 1.000000 weaklyHypermeth 1.4823e-02 0.996161 weaklyHypermeth 4.2351e-01 1 insignificant 0.1355388 1.1128e-02 weaklyHypermeth 6.8012e-01 insignificant 0.69188 0.710856 -0.0239560 8 0.69877 0.72190 -0.0231316 9.4939e-01 0.164800 insignificant 1.0000e+00 1 insignificant 8.6204e-01 0.2718214 insignificant 1.0000e+00 1 insignificant -0.0255113 0.36592689 insignificant 1.0000 insignificant 0.69506 0.62500 0.0692191 7 0.68963 0.55821 0.1314257 1.0387e-03 9.9945e-01 weaklyHypermeth 2.8854e-02 1.00000000 weaklyHypermeth 6.8300e-03 0.998308 weaklyHypermeth 2.9696e-01 1 insignificant 0.132830 1.2607e-02 weaklyHypermeth 7.8166e-01 insignificant 0.69593 0.710856 -0.0060527 8 0.73417 0.72190 0.0122683 3.1623e-01 0.566802 insignificant 1.0000e+00 1 insignificant 4.8805e-01 0.860135 insignificant 1.0000e+00 1 insignificant -0.0282200 0.3264444 insignificant 1.00000 insignificant 0.62831 0.710856 -0.080855 7 0.62798 0.72190 -0.0939189 9.7491e-01 5.8612e-03 weaklyHypometh 1.0000e+00 2.4422e-01 insignificant 9.9073e-01 1.8402e-02 weaklyHypometh 1.0000000 8.3643e-01 insignificant -0.161050 5.1998e-03 weaklyHypometh 0.500884 insignificant chr2 135578588 135579588 21820 RAB3GAP1 ENSG00000115839 0.92215 206 7 0.81594 154 7 0.73772 134 7 0.873149 81 5 0.925969 76 7 0.88685 176 5 0.792674 77 7 0.89093 123 7 0.784127 51 5 0.971919 125 7 0.89731 309 7 0.95238 44 4 0.904768 181 7 0.97619 43 3 0.875832 104 7 0.757143 33 4 0.85833 23 2 0.95787 126 7 0.862052 189 7 0.93285 253 7 0.90659 62 7 0.96939 69 5 0.89754 146 7 0.881391 67 6 0.92483 46 5 0.91946 198 7 0.93003 137 7 0.838384 40 3 0.93789 155 7 0.92850 179 7 0.90722 193 7 0.86352 289 7 0.82355 120 7 0.85957 166 7 0.90139 128 6 0.89177 56 6 0.70286 75 6 0.88645 147 7 0.88228 124 7 0.87830 174 7 0.851659 102 7 0.90021 127 7 0.9730159 110 6 0.90406 0.804427 0.77968 0.90045 0.88946 0.89621 0.80391 0.89755 0.79266 0.959895 0.89828 0.94643 0.90515 0.94547 0.887703 0.81250 0.878129 0.95845 0.864268 0.935817 0.900298 0.965561 0.90352 0.878941 0.895621 0.932710 0.933902 0.823125 0.93250 0.915059 0.897056 0.86676 0.846144 0.871802 0.890947 0.89565 0.70537 0.895118 0.886190 0.869478 0.845760 0.878727 0.974851 4 0.89234 0.90702 -0.0166891 7 0.88681 0.90773 -0.0209235 0.974326 0.150368 insignificant 1 1 insignificant 0.87517 0.166482 insignificant 1 1 insignificant -0.0299209 0.12054 insignificant 1 insignificant 0.89234 0.85694 0.0338054 7 0.88681 0.84848 0.0383218 1.6137e-02 9.8597e-01 weaklyHypermeth 3.5861e-01 1.000000 insignificant 4.4080e-02 0.997238 weaklyHypermeth 1.0000e+00 1 insignificant 0.0345414 3.4439e-01 insignificant 1.0000e+00 insignificant 0.89234 0.912088 -0.0099874 7 0.88681 0.89821 -0.0114052 8.2283e-01 0.314247 insignificant 1.0000e+00 1 insignificant 7.7351e-01 0.4575185 insignificant 1.0000e+00 1 insignificant -0.0182864 0.49626377 insignificant 1.0000 insignificant 0.90702 0.85694 0.0512046 7 0.90773 0.84848 0.0592453 2.9367e-04 9.9965e-01 weaklyHypermeth 9.4732e-03 1.00000000 weaklyHypermeth 2.3163e-03 0.999821 weaklyHypermeth 1.4477e-01 1 insignificant 0.064462 9.0921e-02 insignificant 1.0000e+00 insignificant 0.90702 0.912088 0.0066674 7 0.90773 0.89821 0.0095183 4.0114e-01 0.625816 insignificant 1.0000e+00 1 insignificant 4.7635e-01 0.861976 insignificant 1.0000e+00 1 insignificant 0.0116345 0.6291203 insignificant 1.00000 insignificant 0.85694 0.912088 -0.041620 7 0.84848 0.89821 -0.0497269 9.8420e-01 6.7154e-03 weaklyHypometh 1.0000e+00 2.5828e-01 insignificant 9.9296e-01 1.6809e-02 weaklyHypometh 1.0000000 8.0043e-01 insignificant -0.052828 1.8707e-01 insignificant 1.000000 insignificant chr2 136563978 136564978 21877 DARS ENSG00000115866 0.87491 161 7 0.90224 358 7 0.75525 152 6 0.928571 30 4 0.854804 87 7 0.96349 117 7 0.708550 157 7 0.89272 250 7 0.871463 157 7 0.891142 167 7 0.91485 315 7 0.78759 73 7 0.982252 370 7 NA 0 0 0.875678 169 7 0.751020 40 5 0.54369 40 2 0.91667 44 6 0.953273 286 7 0.92642 152 7 0.81124 114 7 0.77619 24 2 0.94655 175 7 0.887740 62 6 0.91667 10 0 0.95215 371 7 0.74784 101 7 0.776732 72 7 0.91021 387 7 0.94202 463 7 0.92727 341 7 0.90374 211 7 0.74425 346 7 0.76294 334 7 0.89668 504 7 0.76389 26 3 0.76472 98 7 0.79376 347 7 0.94426 61 6 0.95177 143 7 0.979592 30 4 0.87551 56 7 0.8718615 62 7 0.90382 0.923700 0.77068 0.97500 0.87256 0.97119 0.74148 0.91478 0.88538 0.902642 0.93513 0.79266 0.98597 NA 0.878718 0.86020 0.594375 0.90893 0.956417 0.932984 0.831148 0.876190 0.94947 0.893954 0.936426 0.962625 0.774498 0.770049 0.92651 0.944689 0.942987 0.94022 0.762846 0.804517 0.925785 0.78636 0.79207 0.838953 0.937365 0.955586 0.968367 0.920816 0.901385 2 0.90656 0.92492 -0.0155112 7 0.89497 0.90176 -0.0067949 0.900842 0.076771 insignificant 1 1 insignificant 0.89034 0.020114 weaklyHypometh 1 1 insignificant -0.0172520 0.60178 insignificant 1 insignificant 0.90656 0.82719 0.0857281 7 0.89497 0.78174 0.1132268 4.8013e-06 9.9936e-01 weaklyHypermeth 1.8467e-04 1.000000 weaklyHypermeth 1.3212e-02 0.976942 weaklyHypermeth 4.0037e-01 1 insignificant 0.0699033 5.1795e-02 insignificant 1.0000e+00 insignificant 0.90656 0.934659 -0.0278868 7 0.89497 0.92378 -0.0288141 9.8997e-01 0.141208 insignificant 1.0000e+00 1 insignificant 9.9957e-01 0.0093908 weaklyHypometh 1.0000e+00 1 insignificant -0.0669899 0.05782540 insignificant 1.0000 insignificant 0.92492 0.82719 0.1000032 7 0.90176 0.78174 0.1200218 1.0512e-06 9.9987e-01 weaklyHypermeth 5.5326e-05 1.00000000 weaklyHypermeth 1.9564e-03 0.997781 weaklyHypermeth 1.3043e-01 1 insignificant 0.087155 1.5533e-02 weaklyHypermeth 8.6293e-01 insignificant 0.92492 0.934659 -0.0199246 7 0.90176 0.92378 -0.0220192 8.9960e-01 0.448619 insignificant 1.0000e+00 1 insignificant 9.9360e-01 0.059643 insignificant 1.0000e+00 1 insignificant -0.0497379 0.1305019 insignificant 1.00000 insignificant 0.82719 0.934659 -0.120062 7 0.78174 0.92378 -0.1420410 9.9992e-01 3.6888e-04 weaklyHypometh 1.0000e+00 2.6349e-02 weaklyHypometh 9.9982e-01 1.4862e-03 weaklyHypometh 1.0000000 1.6513e-01 insignificant -0.136893 1.8290e-03 weaklyHypometh 0.300024 insignificant chr2 144987436 144988436 22992 ENSG00000176824 0.12768 435 9 0.12575 279 9 0.18723 244 8 0.11534 377 9 0.08143 194 9 0.14255 615 9 0.064023 257 9 0.10495 271 9 0.14498 558 9 0.10435 451 9 0.092787 264 9 0.050313 331 9 0.18324 352 9 0.10659 218 9 0.11609 370 9 0.057109 231 9 0.20345 248 9 0.16514 378 8 0.24296 156 8 0.11444 492 9 0.16199 83 6 0.16939 252 9 0.10089 365 9 0.023077 167 9 0.068109 153 8 0.13625 386 9 0.097767 276 10 0.090546 171 9 0.093695 228 8 0.088794 418 8 0.21602 319 8 0.16666 540 9 0.080687 312 9 0.015873 176 8 0.041667 113 5 0.11111 82 6 0.11603 212 9 0.053397 304 9 0.16970 609 9 0.3071 395 9 0.26933 325 7 0.19312 353 9 0.19030 464 9 0.042553 0.071007 0.09813 0.038798 0.036523 0.08589 0.023932 0.060937 0.076989 0.038715 0.044094 0.023332 0.092303 0.059653 0.082877 0.025201 0.070252 0.084989 0.13091 0.056359 0.12729 0.083077 0.032252 0.0050681 0.059914 0.06327 0.041479 0.037893 0.043412 0.063367 0.17611 0.026148 0.026108 0.0031374 0.010068 0.021962 0.038517 0.015222 0.094384 0.14171 0.11174 0.075103 0.12104 7 0.062937 0.069089 0.00019042 9 0.13344 0.11309 0.020350 0.094182 0.9264 insignificant 1 1 insignificant 0.11065 0.95678 insignificant 1 1 insignificant 0.0087542 0.6504 insignificant 1 insignificant 0.062937 0.035029 0.044427 9 0.13344 0.10278 0.030663 7.3782e-06 0.92506 weaklyHypermeth 0.0008198 1 weaklyHypermeth 1.3409e-06 0.99296 weaklyHypermeth 0.0005877 1 weaklyHypermeth 0.056726 0.016198 weaklyHypermeth 1 insignificant 0.062937 0.10857 -0.05357 9 0.13344 0.23342 -0.099986 0.97414 2.0388e-08 weaklyHypometh 1 2.0388e-05 weaklyHypometh 0.9684 8.923e-06 weaklyHypometh 1 0.008923 weaklyHypometh -0.099389 0.015320 weaklyHypometh 1 insignificant 0.069089 0.035029 0.04198 9 0.11309 0.10278 0.010312 0.0051563 0.68168 weaklyHypermeth 0.28646 1 insignificant 0.00018645 0.95476 weaklyHypermeth 0.046612 1 weaklyHypermeth 0.047972 0.051399 insignificant 1 insignificant 0.069089 0.10857 -0.056314 9 0.11309 0.23342 -0.12034 0.99895 6.7778e-07 weaklyHypometh 1 0.00022593 weaklyHypometh 0.99935 1.0549e-05 weaklyHypometh 1 0.0035164 weaklyHypometh -0.10814 0.0097994 weaklyHypometh 1 insignificant 0.035029 0.10857 -0.10394 9 0.10278 0.23342 -0.13065 1 1.5034e-09 weaklyHypometh 1 1.5034e-06 weaklyHypometh 1 4.5553e-06 weaklyHypometh 1 0.0045553 weaklyHypometh -0.15611 0.0016369 weaklyHypometh 1 insignificant chr2 151753961 151754961 23967 ENSG00000213201 0.79997 111 5 0.55087 69 5 0.62716 41 5 0.84681 110 5 0.74675 26 1 0.54286 31 5 0.76364 31 3 0.74963 84 5 0.78912 30 1 0.82286 41 5 0.69529 121 5 0.48611 23 1 0.65 36 5 0.77143 19 1 0.85556 49 5 0.8 8 0 0.76 21 4 0.84053 118 5 0.83012 65 5 0.58333 11 0 0.58163 16 1 0.9 29 5 0.78807 82 5 0.67483 40 5 0.93333 10 1 0.766 120 5 0.85333 38 4 0.5 14 1 0.53452 49 5 0.83897 99 5 0.74994 98 5 0.68384 34 5 0.71889 54 5 0.58981 57 5 0.8677 82 5 0.7 13 0 0.62321 51 5 0.75697 76 5 0.67765 90 5 0.8036 108 5 0.75956 80 5 0.825 46 5 0.81714 104 5 0.80709 0.54632 0.75005 0.82591 0.82315 0.56473 0.79356 0.77781 0.74107 0.8538 0.69794 0.61198 0.72005 0.79836 0.79579 0.89062 0.8375 0.79863 0.84677 0.64062 0.5904 0.88802 0.80483 0.67001 0.84375 0.76422 0.83542 0.44531 0.77409 0.80388 0.78065 0.78139 0.70503 0.5863 0.85817 0.65365 0.5293 0.70203 0.74787 0.7927 0.82129 0.75 0.82217 0 0.75598 0.7647 -0.010615 5 0.69619 0.67791 0.018282 0.62634 0.39407 insignificant 1 1 insignificant 0.7139 0.21126 insignificant 1 1 insignificant -0.0081046 0.8679 lowCoverage 1 lowCoverage 0.75528 0.6997 0.055793 5 0.65279 0.78832 -0.13553 0.15316 0.97015 insignificant 1 1 insignificant 0.10315 0.74983 insignificant 1 1 insignificant 0.016172 0.74251 lowCoverage 1 lowCoverage 0.75743 0.78271 -0.022421 5 0.79565 0.70284 0.092811 0.74845 0.47884 insignificant 1 1 insignificant 0.877 0.33016 insignificant 1 1 insignificant -0.050989 0.19516 lowCoverage 1 lowCoverage 0.76677 0.6997 0.066132 5 0.72713 0.78832 -0.061189 0.12852 0.91452 insignificant 1 1 insignificant 0.068815 0.9785 insignificant 1 1 insignificant 0.024277 0.6796 lowCoverage 1 lowCoverage 0.7664 0.78271 -0.014153 5 0.70333 0.70284 0.00048879 0.76673 0.50776 insignificant 1 1 insignificant 0.77625 0.8086 insignificant 1 1 insignificant -0.042885 0.39629 lowCoverage 1 lowCoverage 0.6988 0.7822 -0.081975 5 0.75304 0.65331 0.099735 0.99921 0.060604 insignificant 1 1 insignificant 0.99177 0.026321 weaklyHypometh 1 1 insignificant -0.067162 0.20429 lowCoverage 1 lowCoverage chr2 160613000 160614000 24719 LY75 ENSG00000054219 0.86184 431 16 0.65878 141 9 0.73375 130 11 0.90097 336 15 0.93142 70 7 0.81973 407 15 0.80236 86 6 0.88390 114 9 0.61889 63 6 0.73423 86 11 0.87905 300 15 0.71509 73 5 0.85219 155 11 NA 0 0 0.95425 109 6 0.79231 59 6 0.78316 78 10 0.87249 383 15 0.79718 170 14 0.88920 320 15 0.90036 100 10 0.84647 175 14 0.89085 250 16 0.79568 92 8 0.87435 104 11 0.84136 267 14 0.89976 113 9 0.83849 55 6 0.88058 115 10 0.80012 208 14 0.80912 204 12 0.86319 466 15 0.81589 106 9 0.80620 94 10 0.77599 352 15 0.81474 92 9 0.73033 95 6 0.76960 222 14 0.86241 326 15 0.90988 392 15 0.85306 325 15 0.88958 345 15 0.89894 371 15 0.87571 0.78772 0.79641 0.94669 0.94102 0.85037 0.84073 0.89023 0.86759 0.83304 0.90701 0.74148 0.85526 NA 0.92931 0.89177 0.80709 0.86736 0.90824 0.90036 0.93193 0.85615 0.90317 0.85936 0.86486 0.88622 0.90283 0.87528 0.88179 0.87527 0.86069 0.87824 0.91263 0.87810 0.86473 0.77515 0.86733 0.85201 0.93010 0.9104 0.87578 0.87522 0.92590 3 0.86357 0.86598 -0.0051444 15 0.86421 0.84134 0.022867 0.88920 0.67525 insignificant 1 1 insignificant 0.99136 0.44602 insignificant 1 1 insignificant -0.0385824 0.11367 insignificant 1 insignificant 0.86349 0.83559 0.035023 15 0.84724 0.78956 0.057678 4.9185e-05 0.96108 weaklyHypermeth 0.0061481 1 weaklyHypermeth 0.037529 0.90597 weaklyHypermeth 1 1 insignificant 0.029319 0.25293 insignificant 1 insignificant 0.86349 0.89994 -0.028243 14 0.84724 0.88771 -0.040472 0.99762 0.053504 insignificant 1 1 insignificant 0.99629 0.13754 insignificant 1 1 insignificant -0.067997 0.0085686 weaklyHypometh 1 insignificant 0.86620 0.83559 0.040259 15 0.85276 0.78956 0.063203 1.1707e-05 0.98752 weaklyHypermeth 0.0014255 1 weaklyHypermeth 0.0035926 0.96870 weaklyHypermeth 0.35926 1 insignificant 0.067901 0.002401 weaklyHypermeth 0.30012 insignificant 0.86620 0.89994 -0.022842 14 0.85276 0.88771 -0.034947 0.99774 0.049372 weaklyHypometh 1 1 insignificant 0.91728 0.37986 insignificant 1 1 insignificant -0.0294143 0.079563 insignificant 1 insignificant 0.83559 0.89994 -0.060591 14 0.78956 0.88771 -0.098150 0.98519 1.7023e-07 weaklyHypometh 1 4.2558e-05 weaklyHypometh 0.99430 0.0059615 weaklyHypometh 1 0.66239 insignificant -0.097316 0.00035776 weaklyHypometh 0.08944 weaklyHypometh chr2 162109790 162110790 24919 ENSG00000174470 0.91293 232 8 0.60138 100 8 0.63095 78 8 0.86944 104 8 0.74653 60 8 0.86209 263 8 0.65509 62 7 0.85549 83 5 0.77273 54 7 0.82426 72 7 0.87446 214 8 0.74145 48 8 0.84270 106 8 0.81667 27 3 0.76314 93 9 0.63435 55 4 0.34927 43 4 0.90346 156 8 0.78276 108 8 0.78856 203 8 0.64815 25 1 0.82902 71 7 0.70321 134 6 0.74956 47 5 0.79238 66 5 0.79595 156 8 0.87182 46 4 0.88889 24 1 0.80773 68 6 0.60038 136 9 0.69985 138 7 0.88958 260 8 0.59703 93 6 0.67685 59 4 0.71017 167 8 0.73943 78 8 0.83737 67 7 0.69862 164 8 0.78582 159 8 0.78969 250 8 0.86327 189 8 0.88993 182 8 0.86252 182 8 0.92588 0.71784 0.55790 0.91368 0.76732 0.86912 0.68047 0.86483 0.75844 0.87483 0.83801 0.71907 0.87757 0.83437 0.90649 0.88367 0.37838 0.91998 0.83123 0.87897 0.84705 0.85645 0.69944 0.82236 0.82180 0.85718 0.82262 0.84298 0.85665 0.70696 0.83440 0.88963 0.74398 0.80660 0.86494 0.74429 0.81954 0.82148 0.90653 0.8232 0.83986 0.88013 0.84226 1 0.82045 0.81896 0.0015833 8 0.80282 0.74279 0.060024 0.39044 0.42987 insignificant 1 1 insignificant 0.63125 0.56955 insignificant 1 1 insignificant -0.0116575 0.77576 insignificant 1 insignificant 0.82163 0.78662 0.031178 8 0.81672 0.65644 0.160273 1.9489e-02 0.96003 weaklyHypermeth 1.0000000 1 insignificant 0.056921 0.96441 insignificant 1 1 insignificant 0.051473 0.26088 insignificant 1 insignificant 0.82045 0.84304 -0.021792 8 0.80282 0.79211 0.010705 0.98874 0.175385 insignificant 1 1 insignificant 0.98092 0.30686 insignificant 1 1 insignificant -0.076858 0.0497114 weaklyHypometh 1 insignificant 0.82060 0.78662 0.029007 8 0.79135 0.65644 0.134911 7.8108e-03 0.95365 weaklyHypermeth 0.3972860 1 insignificant 0.0279103 0.99103 weaklyHypermeth 1.00000 1 insignificant 0.063130 0.160484 insignificant 1.00000 insignificant 0.81896 0.84304 -0.017044 8 0.74279 0.79211 -0.049319 0.71166 0.138953 insignificant 1 1 insignificant 0.86215 0.22027 insignificant 1 1 insignificant -0.0652004 0.079845 insignificant 1 insignificant 0.78662 0.84105 -0.042084 8 0.65644 0.75054 -0.094093 0.95654 5.9994e-02 insignificant 1 1.0000e+00 insignificant 0.96636 0.0307523 weaklyHypometh 1 1.00000 insignificant -0.128331 0.00982781 weaklyHypometh 0.98278 insignificant chr2 162546075 162547075 24959 SLC4A10 ENSG00000144290 0.94919 405 6 0.86481 152 6 0.88279 121 6 0.96727 114 6 0.91667 56 6 0.95808 232 6 0.93114 134 6 0.91826 142 6 0.95366 121 6 0.96570 149 6 0.92018 150 6 0.95304 104 6 0.97875 152 6 NA 0 0 0.99032 134 6 0.91538 46 6 0.88636 46 6 0.91993 160 6 0.90146 104 6 0.96445 243 6 1.00000 68 4 0.92202 78 6 0.93029 198 6 1.00000 6 0 0.95370 41 6 0.95874 169 6 0.84276 72 6 0.97619 54 6 0.92547 113 6 0.94566 190 6 0.95628 158 6 0.90223 243 6 0.94608 130 6 0.92292 103 6 1.00000 55 2 0.75491 73 6 0.79646 59 6 0.92329 175 6 0.97577 369 6 0.95521 346 6 0.93380 237 6 0.94974 280 6 0.93764 256 6 0.95265 0.86779 0.88459 0.96607 0.92487 0.96056 0.92759 0.91512 0.95292 0.96518 0.91822 0.95072 0.97918 NA 0.98845 0.90753 0.87329 0.92315 0.90525 0.96528 1.00000 0.92015 0.93248 0.98857 0.95049 0.95908 0.84644 0.98075 0.92723 0.94647 0.95791 0.89920 0.94925 0.92577 0.91231 0.76135 0.79555 0.92427 0.97531 0.9518 0.93340 0.95069 0.93741 6 0.93924 0.93597 0.0021835 6 0.93841 0.93609 0.002313 0.59119 0.81355 insignificant 1 1 insignificant 0.96536 0.19330 insignificant 1 1 insignificant -0.0092283 0.54190 insignificant 1 insignificant 0.93924 0.90756 0.033530 6 0.93841 0.89566 0.042743 1.5899e-04 0.98160 weaklyHypermeth 0.0176653 1 weaklyHypermeth 0.012121 0.92792 weaklyHypermeth 1 1 insignificant 0.042939 0.32066 insignificant 1 insignificant 0.93924 0.95363 -0.013700 6 0.93841 0.95379 -0.015389 0.95667 0.153084 insignificant 1 1 insignificant 0.78678 0.57158 insignificant 1 1 insignificant -0.016881 0.1435986 insignificant 1 insignificant 0.93597 0.90756 0.034993 6 0.93609 0.89566 0.040430 6.3164e-04 0.94312 weaklyHypermeth 0.0485880 1 weaklyHypermeth 0.0100856 0.98690 weaklyHypermeth 0.77582 1 insignificant 0.052167 0.244283 insignificant 1.00000 insignificant 0.93597 0.95363 -0.017295 6 0.93609 0.95379 -0.017702 0.94870 0.109281 insignificant 1 1 insignificant 0.40343 0.85889 insignificant 1 1 insignificant -0.0076528 0.607346 insignificant 1 insignificant 0.90756 0.95363 -0.045423 6 0.89566 0.95379 -0.058132 0.99156 9.6446e-04 weaklyHypometh 1 9.6446e-02 weaklyHypometh 0.94333 0.0453815 weaklyHypometh 1 1.00000 insignificant -0.059820 0.18351507 insignificant 1.00000 insignificant chr2 165398268 165399268 25456 ENSG00000208214 0.75175 218 7 0.76709 78 7 0.63258 97 7 0.71670 100 7 0.55357 63 7 0.69053 158 7 0.66028 86 6 0.67381 88 7 0.63990 91 7 0.72168 83 7 0.67424 165 7 0.59857 80 7 0.73320 127 7 NA 0 0 0.77102 107 7 0.57028 98 7 0.59411 71 7 0.70282 122 7 0.69017 103 7 0.77858 133 7 0.80952 15 0 0.71104 47 3 0.71215 87 7 0.82867 45 3 0.89221 56 7 0.69939 145 7 0.72980 37 3 0.69388 36 4 0.59487 100 7 0.75132 164 7 0.76897 118 7 0.75875 168 7 0.66431 89 6 0.66559 118 7 0.60857 92 7 0.79762 54 7 0.59762 40 3 0.57714 143 7 0.77850 231 7 0.75989 243 7 0.74652 183 7 0.72913 196 7 0.76644 144 7 0.79629 0.81203 0.70631 0.75937 0.66430 0.72730 0.69871 0.74350 0.68947 0.75499 0.73190 0.62213 0.78872 NA 0.79448 0.58903 0.57351 0.79017 0.72707 0.80335 0.86447 0.77052 0.78273 0.80886 0.94191 0.72243 0.70944 0.76177 0.67526 0.80285 0.82239 0.80823 0.69707 0.73038 0.66184 0.73779 0.61035 0.61517 0.81811 0.82142 0.77744 0.75061 0.81874 3 0.69923 0.75442 -0.0423995 7 0.68976 0.73702 -0.047261 0.992098 0.006516 weaklyHypometh 1 1 insignificant 0.99937 0.0040074 weaklyHypometh 1 1 insignificant -0.065834 0.023067 weaklyHypometh 1 insignificant 0.69923 0.65299 0.0572812 7 0.68976 0.63812 0.0516382 0.0224182 0.99698 weaklyHypermeth 1.00000 1 insignificant 0.071887 0.98511 insignificant 1 1 insignificant 0.0282375 0.45953 insignificant 1 insignificant 0.69923 0.76229 -0.067238 7 0.68976 0.75752 -0.067767 0.99992 0.0090954 weaklyHypometh 1 1 insignificant 0.99998 0.0063763 weaklyHypometh 1 1 insignificant -0.076050 0.00031892 weaklyHypometh 0.10631 insignificant 0.75442 0.65299 0.1002865 7 0.73702 0.63812 0.0988994 9.0091e-05 0.99995 weaklyHypermeth 0.010711 1 weaklyHypermeth 0.0003624 0.99998 weaklyHypermeth 0.07248 1 weaklyHypermeth 0.0940714 0.038701 weaklyHypermeth 1 insignificant 0.75442 0.76229 -0.024060 7 0.73702 0.75752 -0.0205059 0.90731 0.282620 insignificant 1 1 insignificant 0.70422 0.705379 insignificant 1 1 insignificant -0.010216 0.67042 insignificant 1 insignificant 0.65299 0.76229 -0.124537 7 0.63812 0.75752 -0.119405 1.00000 6.6598e-05 weaklyHypometh 1 0.011100 weaklyHypometh 1.00000 0.00038204 weaklyHypometh 1 0.2994 insignificant -0.1042875 0.023010 weaklyHypometh 1 insignificant chr2 165713846 165714846 25474 SLC38A11 ENSG00000169507 0.83413 97 5 0.67390 75 5 0.66389 44 5 0.81042 80 5 0.78182 31 5 0.81921 103 5 0.73908 43 1 0.68824 78 5 0.76667 32 5 0.70952 34 5 0.59686 154 5 0.72000 22 4 0.69167 51 5 0.85000 41 5 0.68254 44 5 0.66286 33 5 0.50000 5 0 0.65385 69 6 0.69632 59 5 0.63194 48 5 1.00000 16 1 0.90000 8 0 0.78462 37 5 0.69444 20 1 0.84891 52 5 0.79144 101 5 0.80495 48 5 0.56667 16 1 0.78961 65 5 0.74875 106 5 0.58554 62 5 0.70755 89 5 0.65932 75 5 0.71071 46 5 0.70333 92 5 0.80000 15 0 0.77468 28 2 0.57262 95 5 0.83846 64 5 0.84000 69 5 0.67026 117 5 0.84000 34 5 0.87033 76 5 0.85063 0.69617 0.70992 0.84415 0.81059 0.82119 0.76684 0.75614 0.81857 0.74262 0.76434 0.78481 0.72871 0.87184 0.73498 0.65859 0.63323 0.73347 0.75593 0.79448 1.00000 0.93038 0.81646 0.70675 0.84526 0.82768 0.82831 0.61814 0.80224 0.78252 0.75235 0.74265 0.66253 0.77238 0.75612 0.84388 0.79513 0.71175 0.87910 0.87342 0.73312 0.85823 0.89762 1 0.74103 0.77258 -0.0273873 5 0.68504 0.72014 -0.035101 0.761704 0.051277 insignificant 1 1 insignificant 0.96941 0.0812180 insignificant 1 1 insignificant -0.059894 0.153013 lowCoverage 1 lowCoverage 0.74103 0.69516 0.0469762 5 0.68504 0.57440 0.1106432 0.0371589 0.93336 weaklyHypermeth 1.00000 1 insignificant 0.605754 0.74014 insignificant 1 1 insignificant 0.0052008 0.89575 lowCoverage 1 lowCoverage 0.74339 0.80833 -0.054695 5 0.73316 0.78645 -0.053283 0.96854 0.0101537 weaklyHypometh 1 1 insignificant 0.99606 0.0013319 weaklyHypometh 1 1 insignificant -0.103165 0.04142500 lowCoverage 1.00000 lowCoverage 0.77258 0.69516 0.0757113 5 0.72014 0.57440 0.1457438 9.1738e-03 0.98732 weaklyHypermeth 0.764482 1 insignificant 0.2576191 0.98324 insignificant 1.00000 1 insignificant 0.0650951 0.200960 lowCoverage 1 lowCoverage 0.77346 0.80833 -0.026896 5 0.76417 0.78645 -0.0222738 0.85186 0.061199 insignificant 1 1 insignificant 0.97162 0.062432 insignificant 1 1 insignificant -0.043271 0.40702 lowCoverage 1 lowCoverage 0.69714 0.80833 -0.099290 5 0.68928 0.78645 -0.097166 0.99711 1.2683e-02 weaklyHypometh 1 1.000000 insignificant 0.99891 0.00974562 weaklyHypometh 1 1.0000 insignificant -0.1083661 0.055448 lowCoverage 1 lowCoverage chr2 168441081 168442081 25631 B3GALT1 ENSG00000172318 0.53105 97 5 0.49338 81 5 0.43095 33 5 0.53389 116 5 0.48889 34 4 0.53802 159 5 0.48519 40 5 0.67370 88 5 0.57987 56 5 0.48297 43 5 0.46108 166 5 0.58333 20 0 0.68367 68 5 0.54643 36 5 0.57143 44 5 0.48000 21 4 0.81250 14 0 0.60745 92 5 0.51429 46 5 0.58489 145 5 0.61111 30 5 0.62357 74 5 0.46389 51 5 0.55556 28 1 0.53480 39 5 0.65412 127 5 0.51765 73 5 0.68571 11 1 0.52305 51 5 0.42175 113 5 0.52116 92 5 0.64757 159 5 0.53946 94 5 0.52788 52 5 0.49325 55 5 0.00000 1 0 0.51460 53 5 0.49987 137 5 0.56325 90 5 0.64149 87 5 0.55756 74 5 0.63636 57 5 0.64983 126 5 0.53105 0.49338 0.43095 0.53389 0.48889 0.53802 0.58222 0.54318 0.49584 0.48297 0.46108 0.50000 0.55714 0.54643 0.48571 0.48000 0.70000 0.60745 0.51429 0.50187 0.53333 0.62357 0.46389 0.46667 0.53480 0.51577 0.51765 0.68571 0.52305 0.42175 0.52116 0.57708 0.53946 0.52788 0.49325 NA 0.51460 0.49987 0.56325 0.64149 0.55756 0.49091 0.57979 0 0.52609 0.53420 -0.0044854 5 0.67774 0.70123 -0.023492 0.972971 0.455834 insignificant 1 1 insignificant 0.96450 0.3253506 insignificant 1 1 insignificant -0.009179 0.768649 lowCoverage 1 lowCoverage 0.52271 0.52296 0.0059376 5 0.51771 0.51435 0.0033621 0.0750771 0.30122 insignificant 1.00000 1 insignificant 0.169802 0.17712 insignificant 1 1 insignificant 0.1249727 0.21110 lowCoverage 1 lowCoverage 0.52507 0.58525 -0.058849 5 0.63170 0.69714 -0.065440 0.99996 0.0058510 weaklyHypometh 1 1 insignificant 0.99970 0.0467681 weaklyHypometh 1 1 insignificant -0.055549 0.07333841 lowCoverage 1.00000 lowCoverage 0.53144 0.52296 0.0098812 5 0.52197 0.51435 0.0076158 7.4910e-02 0.42517 insignificant 1.000000 1 insignificant 0.2068406 0.37714 insignificant 1.00000 1 insignificant 0.1341518 0.185588 lowCoverage 1 lowCoverage 0.53365 0.58525 -0.055597 5 0.65855 0.69714 -0.0385921 0.99998 0.139442 insignificant 1 1 insignificant 0.99803 0.536989 insignificant 1 1 insignificant -0.046370 0.15790 lowCoverage 1 lowCoverage 0.52296 0.58237 -0.065207 5 0.51435 0.57599 -0.061645 0.90321 1.3167e-02 weaklyHypometh 1 1.000000 insignificant 0.83847 0.02308741 weaklyHypometh 1 1.0000 insignificant -0.1805213 0.091232 lowCoverage 1 lowCoverage chr2 172440447 172441447 25851 DYNC1I2 ENSG00000077380 0.73159 65 5 0.70660 64 4 0.69286 20 1 0.66429 77 2 0.76407 154 5 0.77778 23 2 0.71722 184 5 0.75646 63 5 0.81667 52 5 0.58302 84 5 0.70493 70 5 0.75073 81 5 0.85571 227 5 0.73868 173 5 0.82828 63 5 0.57424 41 3 0.61329 57 3 0.66785 86 6 0.88889 7 0 0.62037 23 2 0.64279 88 5 0.75102 22 3 0.70281 142 5 0.61519 41 5 0.46431 107 4 0.72222 13 2 0.51370 183 4 0.78275 44 3 0.78573 78 5 0.71429 26 0 0.78571 13 0 0.85000 15 1 0.71947 132 5 0.73333 35 2 0.72704 57 6 NA 0 0 0.60530 188 5 0.72222 18 2 0.63571 66 4 0.83333 56 2 0.73748 121 5 0.79263 49 3 0.54000 36 2 0.74317 0.77739 0.75000 0.64802 0.81226 0.75000 0.79811 0.70707 0.90741 0.79643 0.69224 0.84350 0.87295 0.84976 0.90348 0.51536 0.76158 0.70601 0.79632 0.50617 0.79400 0.68254 0.91334 0.73787 0.71829 0.74095 0.63153 0.85839 0.83849 0.77778 0.86111 0.79167 0.81288 0.70000 0.87996 NA 0.77203 0.78046 0.75860 0.76852 0.68210 0.93990 0.70648 0 0.73420 0.76295 -0.0083490 5 0.75543 0.64381 0.111616 0.060421 0.406153 insignificant 1 1 insignificant 0.37644 0.4146382 insignificant 1 1 insignificant 0.028466 0.471296 lowCoverage 1 lowCoverage 0.73471 0.75349 -0.0013037 4 0.76811 0.63504 0.1330679 0.0086611 0.60382 lowCoverage 0.61865 1 lowCoverage 0.274921 0.58388 lowCoverage 1 1 lowCoverage 0.0212032 0.50997 lowCoverage 1 lowCoverage 0.73471 0.68902 0.060354 5 0.76811 0.74445 0.023663 0.14333 0.6536845 insignificant 1 1 insignificant 0.21468 0.3139494 insignificant 1 1 insignificant 0.014844 0.80440229 lowCoverage 1.00000 lowCoverage 0.76494 0.75349 0.0107937 4 0.73579 0.63504 0.1007452 3.0768e-01 0.89071 lowCoverage 1.000000 1 lowCoverage 0.4602523 0.85777 lowCoverage 1.00000 1 lowCoverage -0.0072633 0.862685 lowCoverage 1 lowCoverage 0.76494 0.68902 0.054921 5 0.73579 0.74445 -0.0086602 0.32108 0.658659 insignificant 1 1 insignificant 0.57840 0.593773 insignificant 1 1 insignificant -0.013622 0.83489 lowCoverage 1 lowCoverage 0.75349 0.68902 0.037047 4 0.63504 0.74445 -0.109405 0.56042 5.9562e-02 lowCoverage 1 1.000000 lowCoverage 0.60235 0.25098785 lowCoverage 1 1.0000 lowCoverage -0.0063588 0.917502 lowCoverage 1 lowCoverage chr2 175047863 175048863 26125 SCRN3 ENSG00000144306 0.8167954 467 16 0.807436 151 9 0.508152 145 7 0.83908 320 16 0.889815 82 9 0.781033 463 15 0.8735167 107 8 0.875714 85 7 0.843074 69 5 0.84545 97 8 0.766029 222 12 0.786538 54 7 0.784159 135 9 NA 0 0 0.759596 69 9 0.693488 67 7 0.619231 66 3 0.84657 476 16 0.77123 205 15 0.82815 336 15 0.768182 45 6 0.856061 110 9 0.806433 221 16 0.87768 69 9 0.89510 98 9 0.80634 315 15 0.787515 91 9 0.803030 34 1 0.836501 91 9 0.77207 259 15 0.7706037 215 14 0.7400192 443 16 0.75629 174 13 0.7642399 117 11 0.78366 307 15 0.81477 74 9 0.797619 52 6 0.72627 255 15 0.8167376 347 16 0.84183 470 16 0.82623 367 16 0.85564 351 16 0.856401 439 16 0.7259995 0.640275 0.6369055 0.72157 0.765426 0.678192 0.7746014 0.780133 0.784891 0.74411 0.739943 0.734840 0.7181110 NA 0.715248 0.722371 0.681772 0.76547 0.689919 0.69115 0.722416 0.768085 0.735921 0.77551 0.81037 0.70002 0.7426534 0.721631 0.74073 0.73720 0.6893824 0.7109400 0.71338 0.6150047 0.6889388 0.74021 0.7572188 0.67022 0.7587708 0.75172 0.72882 0.78305 0.7665952 4 0.807192 0.7945756 0.0136952 15 0.817136 0.7919509 0.02518514 0.127335 0.91551 insignificant 1 1 insignificant 0.79283 0.5251476 insignificant 1 1 insignificant -0.0239057 0.356405 insignificant 1 insignificant 0.807192 0.7477017 0.0417266 15 0.817136 0.7745673 0.0425688 1.4456e-02 9.9966e-01 weaklyHypermeth 8.5036e-01 1.0000e+00 insignificant 0.2050374 9.9456e-01 insignificant 1 1.0000e+00 insignificant 0.012247 6.2981e-01 insignificant 1.000e+00 insignificant 0.807246 0.8774063 -0.0307984 15 0.827295 0.85561 -0.0283101 0.995956 0.051676 insignificant 1 1 insignificant 0.961899 0.3231887 insignificant 1 1 insignificant -0.0533123 0.0296956 weaklyHypometh 1 insignificant 0.7945756 0.7477017 0.0297784 15 0.7919509 0.7745673 0.0173836 1.4367e-02 9.4454e-01 weaklyHypermeth 8.9797e-01 1.0000e+00 insignificant 0.1151466 9.9835e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0361529 7.5140e-02 insignificant 1.0000e+00 insignificant 0.7945756 0.8773441 -0.0401932 15 0.7919509 0.84711 -0.0551605 0.99992 0.0013384 weaklyHypometh 1 0.66922 insignificant 0.954264 0.56574 insignificant 1 1 insignificant -0.029407 0.083031 insignificant 1 insignificant 0.7477017 0.8773441 -6.9383e-02 15 0.7745673 0.84711 -0.07254414 9.9999e-01 1.0478e-04 weaklyHypometh 1.0000e+00 0.017463 weaklyHypometh 9.9511e-01 0.106227 insignificant 1.0000e+00 1 insignificant -0.06555942 2.4796e-03 weaklyHypometh 0.4132626 insignificant chr2 176473172 176474172 26324 ENSG00000221347 0.8738251 476 15 0.855808 126 10 0.754457 135 11 0.90368 344 15 0.928266 48 4 0.839128 432 15 0.8830249 93 8 0.565817 106 9 0.669196 84 9 0.71842 87 7 0.811463 325 15 0.850446 88 8 0.856003 149 8 NA 0 0 0.699015 125 11 0.570281 71 6 0.755528 91 9 0.89778 326 14 0.85574 153 14 0.88169 322 15 0.811111 33 2 0.790639 123 11 0.882118 237 15 0.97511 65 7 0.81548 81 8 0.86501 228 13 0.843606 108 8 0.983333 52 7 0.802531 89 7 0.91437 270 14 0.8465297 227 14 0.8638213 482 15 0.81519 121 9 0.8267821 92 8 0.88271 268 15 0.85655 63 5 0.838462 58 5 0.75860 218 15 0.8716365 344 15 0.86357 405 15 0.89848 432 15 0.92404 364 15 0.928335 415 15 0.9120032 0.818279 0.8342087 0.90051 0.849229 0.867420 0.8913774 0.801530 0.828605 0.82570 0.866826 0.869691 0.8498859 NA 0.809546 0.683123 0.818414 0.85028 0.905975 0.90459 0.835703 0.778249 0.892117 0.94570 0.91860 0.87008 0.8648544 0.946788 0.88757 0.93302 0.8594175 0.8512929 0.79089 0.7697722 0.8189071 0.72176 0.8394760 0.83469 0.8999090 0.85613 0.90300 0.91890 0.9124990 2 0.866518 0.8681704 -0.0031755 14 0.854383 0.8590802 -0.00469739 0.414317 0.33059 insignificant 1 1 insignificant 0.99031 0.0034381 weaklyHypometh 1 1 insignificant -0.0677394 0.037507 weaklyHypometh 1 insignificant 0.866518 0.8109756 0.0624397 9 0.854383 0.8183520 0.0360309 1.3210e-04 9.9675e-01 weaklyHypermeth 1.6513e-02 1.0000e+00 weaklyHypermeth 0.0351349 5.1634e-01 weaklyHypermeth 1 1.0000e+00 insignificant -0.031317 3.1439e-01 insignificant 1.000e+00 insignificant 0.866443 0.9137755 -0.0383191 14 0.845282 0.89946 -0.0541788 0.992636 0.019535 weaklyHypometh 1 1 insignificant 0.975355 0.0092326 weaklyHypometh 1 1 insignificant -0.0988143 0.0020983 weaklyHypometh 1 insignificant 0.8681704 0.8109756 0.0632800 9 0.8590802 0.8183520 0.0407283 3.8820e-05 9.7811e-01 weaklyHypermeth 5.5457e-03 1.0000e+00 weaklyHypermeth 0.0012003 9.7970e-01 weaklyHypermeth 0.60017 1.0000e+00 insignificant 0.0364225 1.6905e-01 insignificant 1.0000e+00 insignificant 0.8683417 0.9137755 -0.0301039 14 0.8627728 0.89946 -0.0366878 0.99957 0.0062986 weaklyHypometh 1 1.00000 insignificant 0.883610 0.67404 insignificant 1 1 insignificant -0.031075 0.189734 insignificant 1 insignificant 0.8107448 0.9137755 -9.1709e-02 9 0.8069990 0.89946 -0.09246157 1.0000e+00 3.5516e-05 weaklyHypometh 1.0000e+00 0.008879 weaklyHypometh 9.2268e-01 0.016499 weaklyHypometh 1.0000e+00 1 insignificant -0.06749736 1.2780e-02 weaklyHypometh 1.0000000 insignificant chr2 176719477 176720477 26347 ENSG00000175892 0.4313523 161 6 0.397436 117 6 0.468750 72 6 0.19943 146 6 0.344170 58 6 0.517988 116 6 0.2706044 101 6 0.420370 69 6 0.334921 66 6 0.30476 36 6 0.347067 129 6 0.133333 21 3 0.428205 52 3 0.29630 35 3 0.540404 75 3 0.287500 34 3 NA 0 0 0.39241 179 6 0.23968 53 3 0.24824 106 6 0.338889 55 3 0.583333 10 0 0.250593 112 6 0.29870 52 6 0.42699 168 6 0.31564 128 6 0.308967 102 6 0.305556 29 3 0.380952 55 4 0.25915 128 6 0.2207359 129 6 0.2722663 92 3 0.98131 110 6 0.9055961 227 6 NA 0 0 0.83333 27 3 0.844156 49 5 0.97807 184 6 0.2338348 232 6 0.31444 174 6 0.50816 193 6 0.31944 84 3 0.334851 224 6 0.4803618 0.467949 0.5364583 0.27136 0.393239 0.538887 0.3404304 0.497222 0.311905 0.40000 0.374304 0.200000 0.5867521 0.41667 0.588384 0.347917 NA 0.43147 0.303968 0.37236 0.397222 0.791667 0.301815 0.35606 0.47075 0.38271 0.3773704 0.458333 0.40476 0.32249 0.2715800 0.3528439 0.97955 0.8844359 NA 0.91667 0.9772727 0.97923 0.3322337 0.36408 0.57705 0.39583 0.3886397 3 0.428219 0.3603774 0.0556789 6 0.315833 0.2682108 0.04762184 0.028743 0.99453 weaklyHypermeth 1 1 insignificant 0.22809 0.8533314 insignificant 1 1 insignificant 0.0173740 0.646800 lowCoverage 1 lowCoverage 0.429012 0.9463087 -0.5199724 6 0.368471 0.9482095 -0.5797381 1.0000e+00 1.9083e-38 hypomethylated 1.0000e+00 1.9083e-35 hypomethylated 1.0000000 4.9808e-13 hypomethylated 1 4.9808e-10 hypomethylated -0.560972 1.0808e-07 lowCoverage 5.404e-05 lowCoverage 0.429012 0.4332966 0.0094806 6 0.368471 0.34766 0.0208111 0.448873 0.860320 insignificant 1 1 insignificant 0.624300 0.8342542 insignificant 1 1 insignificant 0.0053765 0.9197438 lowCoverage 1 lowCoverage 0.3607177 0.9463087 -0.5887861 6 0.3129126 0.9482095 -0.6352969 1.0000e+00 1.4325e-36 hypomethylated 1.0000e+00 1.4325e-33 hypomethylated 1.0000000 7.9668e-11 hypomethylated 1.00000 7.9668e-08 hypomethylated -0.5783459 5.0642e-08 lowCoverage 2.5321e-05 lowCoverage 0.3607177 0.4332966 -0.0441722 6 0.3129126 0.34766 -0.0347477 0.95292 0.2399462 insignificant 1 1.00000 insignificant 0.945477 0.29722 insignificant 1 1 insignificant -0.011998 0.827644 lowCoverage 1 lowCoverage 0.9463087 0.4332966 5.6326e-01 6 0.9482095 0.34766 0.60054924 1.1258e-24 1.0000e+00 hypermethylated 1.1258e-21 1.000000 hypermethylated 6.4793e-08 1.000000 hypermethylated 6.4793e-05 1 hypermethylated 0.56634829 1.5072e-05 lowCoverage 0.0075359 lowCoverage chr2 176774132 176775132 26356 ENSG00000218175 0.9401378 170 5 0.871032 93 5 0.871429 61 5 0.96189 202 5 1.000000 78 5 0.795586 259 5 0.8742857 69 5 0.970571 124 5 0.817708 78 5 0.91035 82 5 0.970243 245 5 0.752381 42 5 0.957576 157 5 0.72826 105 5 0.907812 171 5 0.840000 36 1 NA 0 0 0.89549 216 5 0.95263 235 5 0.92027 168 5 0.493827 49 4 0.705861 76 5 0.863184 81 5 0.56823 134 5 1.00000 66 5 0.94187 159 5 0.849785 92 5 0.788889 57 5 0.974909 117 5 0.75647 150 5 1.0000000 122 5 0.9632454 163 5 0.68905 137 5 0.7789474 71 5 0.50000 6 1 0.80000 21 1 0.614260 103 5 0.88202 203 5 0.8223715 238 5 0.69048 175 5 0.93150 187 5 0.92697 115 5 0.967641 145 5 0.9406742 0.837218 0.8671429 0.96543 1.000000 0.955709 0.8848120 0.964015 0.914956 0.89222 0.968235 0.772932 0.9631579 0.96796 0.912658 0.856579 NA 0.89184 0.955558 0.90865 0.873684 0.852198 0.866479 0.89747 1.00000 0.94085 0.8517390 0.938772 0.97105 0.90709 1.0000000 0.9632814 0.70035 0.7969955 NA 0.81930 0.6413238 0.89313 0.9494391 0.96988 0.93049 0.91029 0.9644426 5 0.933230 0.9210111 0.0025588 5 0.667350 0.4669065 0.20044323 0.980843 0.92127 insignificant 1 1 insignificant 0.55968 0.9103918 insignificant 1 1 insignificant 0.0659331 0.224526 lowCoverage 1 lowCoverage 0.934185 0.7504621 0.1838259 5 0.778916 0.7930523 -0.0141361 3.0684e-10 1.0000e+00 weaklyHypermeth 1.0228e-07 1.0000e+00 weaklyHypermeth 0.0127203 9.9768e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.180742 2.2564e-02 lowCoverage 1.000e+00 lowCoverage 0.933230 0.9418605 -0.0129586 5 0.667350 0.67354 -0.0061940 0.999671 0.943449 insignificant 1 1 insignificant 0.997039 0.8940620 insignificant 1 1 insignificant 0.0236636 0.6766051 lowCoverage 1 lowCoverage 0.9328000 0.7504621 0.1816137 5 0.7781775 0.7930523 -0.0148748 7.6543e-08 9.9999e-01 weaklyHypermeth 3.8271e-05 1.0000e+00 weaklyHypermeth 0.0138647 9.9774e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.1148088 1.5016e-01 lowCoverage 1.0000e+00 lowCoverage 0.9210111 0.9418605 -0.0174877 5 0.4669065 0.67354 -0.2066372 0.99769 0.9603820 insignificant 1 1.00000 insignificant 0.992317 0.87654 insignificant 1 1 insignificant -0.042269 0.559126 lowCoverage 1 lowCoverage 0.7504621 0.9473068 -1.9741e-01 5 0.7930523 0.95591 -0.16285388 9.9998e-01 2.0762e-04 weaklyHypometh 1.0000e+00 0.023069 weaklyHypometh 9.9988e-01 0.047513 weaklyHypometh 1.0000e+00 1 insignificant -0.15707827 6.8332e-02 lowCoverage 1.0000000 lowCoverage chr2 177092260 177093260 26417 ENSG00000221304 0.8105556 49 5 0.739993 61 5 0.710909 35 3 0.75417 48 3 0.774101 131 3 0.671667 50 5 0.7114286 83 3 0.652308 43 5 0.587381 42 5 0.61855 53 4 0.830333 83 5 0.508148 56 2 0.741374 194 5 0.74608 84 5 0.872619 66 4 0.691667 54 2 1.000000 1 0 0.85000 24 1 0.72000 18 2 0.87000 22 3 0.566667 14 0 0.875000 6 0 0.755128 147 5 0.90476 31 3 0.61667 13 0 0.70364 60 5 0.734524 24 2 0.666667 11 0 0.844466 115 5 0.70857 45 5 0.7340909 66 5 0.6444444 30 4 0.75665 109 5 0.6873016 33 3 0.60177 70 5 1.00000 3 0 0.639286 46 5 0.64358 53 3 0.5600000 37 5 0.58462 47 4 0.58222 41 3 0.83659 61 2 0.793407 47 3 0.7940821 0.737451 0.7205534 0.73822 0.760254 0.660507 0.6863354 0.622074 0.568892 0.58538 0.826449 0.672145 0.7188848 0.72400 0.861542 0.664855 NA 0.83696 0.695652 0.85870 0.528986 0.876059 0.741081 0.90890 0.60507 0.67787 0.7694099 0.637681 0.83094 0.69565 0.7109684 0.6135266 0.75130 0.6849551 0.5997475 0.82668 0.6327640 0.62050 0.5217391 0.55518 0.54589 0.82238 0.7754419 0 0.704849 0.7099644 -0.0019301 5 0.734683 0.7343920 0.00029143 0.495858 0.44861 insignificant 1 1 insignificant 0.45343 0.3649538 insignificant 1 1 insignificant 0.0135118 0.731236 lowCoverage 1 lowCoverage 0.704849 0.6528662 0.0766523 5 0.734683 0.6586978 0.0759857 4.4367e-03 9.9189e-01 weaklyHypermeth 2.7729e-01 1.0000e+00 insignificant 0.0336951 9.4239e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.021632 7.4839e-01 lowCoverage 1.000e+00 lowCoverage 0.704849 0.7467811 0.0061392 5 0.734683 0.72749 0.0071909 0.472458 0.498172 insignificant 1 1 insignificant 0.131025 0.8821877 insignificant 1 1 insignificant 0.0716964 0.3106775 lowCoverage 1 lowCoverage 0.7099644 0.6528662 0.0729023 5 0.7343920 0.6586978 0.0756942 3.2303e-02 9.9153e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0913475 9.7943e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0081205 9.0638e-01 lowCoverage 1.0000e+00 lowCoverage 0.7099644 0.7467811 0.0144970 5 0.7343920 0.72749 0.0068995 0.20396 0.5730705 insignificant 1 1.00000 insignificant 0.075972 0.86452 insignificant 1 1 insignificant 0.058185 0.412996 lowCoverage 1 lowCoverage 0.6528662 0.7467811 -6.2475e-02 5 0.6586978 0.72749 -0.06879476 8.4161e-01 2.3928e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 3.7563e-01 0.382636 insignificant 1.0000e+00 1 insignificant 0.05006413 5.6651e-01 lowCoverage 1.0000000 lowCoverage chr2 177092724 177093724 26418 ENSG00000221304 0.8105556 49 5 0.739993 61 5 0.710909 35 3 0.75417 48 3 0.774101 131 3 0.671667 50 5 0.7114286 83 3 0.652308 43 5 0.587381 42 5 0.61855 53 4 0.830333 83 5 0.508148 56 2 0.741374 194 5 0.74608 84 5 0.872619 66 4 0.691667 54 2 1.000000 1 0 0.85000 24 1 0.72000 18 2 0.87000 22 3 0.566667 14 0 0.875000 6 0 0.755128 147 5 0.90476 31 3 0.61667 13 0 0.70364 60 5 0.734524 24 2 0.666667 11 0 0.844466 115 5 0.70857 45 5 0.7340909 66 5 0.6444444 30 4 0.75665 109 5 0.6873016 33 3 0.60177 70 5 1.00000 3 0 0.639286 46 5 0.64358 53 3 0.5600000 37 5 0.58462 47 4 0.58222 41 3 0.83659 61 2 0.793407 47 3 0.7940821 0.737451 0.7205534 0.73822 0.760254 0.660507 0.6863354 0.622074 0.568892 0.58538 0.826449 0.672145 0.7188848 0.72400 0.861542 0.664855 NA 0.83696 0.695652 0.85870 0.528986 0.876059 0.741081 0.90890 0.60507 0.67787 0.7694099 0.637681 0.83094 0.69565 0.7109684 0.6135266 0.75130 0.6849551 0.5997475 0.82668 0.6327640 0.62050 0.5217391 0.55518 0.54589 0.82238 0.7754419 0 0.704849 0.7099644 -0.0019301 5 0.734683 0.7343920 0.00029143 0.495858 0.44861 insignificant 1 1 insignificant 0.45343 0.3649538 insignificant 1 1 insignificant 0.0135118 0.731236 lowCoverage 1 lowCoverage 0.704849 0.6528662 0.0766523 5 0.734683 0.6586978 0.0759857 4.4367e-03 9.9189e-01 weaklyHypermeth 2.7729e-01 1.0000e+00 insignificant 0.0336951 9.4239e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.021632 7.4839e-01 lowCoverage 1.000e+00 lowCoverage 0.704849 0.7467811 0.0061392 5 0.734683 0.72749 0.0071909 0.472458 0.498172 insignificant 1 1 insignificant 0.131025 0.8821877 insignificant 1 1 insignificant 0.0716964 0.3106775 lowCoverage 1 lowCoverage 0.7099644 0.6528662 0.0729023 5 0.7343920 0.6586978 0.0756942 3.2303e-02 9.9153e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0913475 9.7943e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0081205 9.0638e-01 lowCoverage 1.0000e+00 lowCoverage 0.7099644 0.7467811 0.0144970 5 0.7343920 0.72749 0.0068995 0.20396 0.5730705 insignificant 1 1.00000 insignificant 0.075972 0.86452 insignificant 1 1 insignificant 0.058185 0.412996 lowCoverage 1 lowCoverage 0.6528662 0.7467811 -6.2475e-02 5 0.6586978 0.72749 -0.06879476 8.4161e-01 2.3928e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 3.7563e-01 0.382636 insignificant 1.0000e+00 1 insignificant 0.05006413 5.6651e-01 lowCoverage 1.0000000 lowCoverage chr2 179495421 179496421 26710 CCDC141 ENSG00000163492 0.8363100 530 15 0.807740 137 8 0.713834 126 10 0.88477 385 15 0.929365 69 5 0.863728 352 14 0.8067308 83 8 0.908017 128 9 0.681845 67 4 0.70593 91 6 0.903722 237 10 0.808333 25 0 0.901230 123 8 NA 0 0 0.947708 92 10 0.824786 57 5 0.811538 85 6 0.92011 374 15 0.86566 162 12 0.85393 319 14 0.884524 46 3 0.815939 126 14 0.852453 219 15 0.82590 70 7 0.85873 109 12 0.85041 244 13 0.804609 106 8 0.986111 28 2 0.872047 121 10 0.88492 229 14 0.8569421 177 13 0.7829644 330 12 0.91211 108 8 0.8623377 156 10 0.78222 231 14 0.82060 69 6 0.840005 63 4 0.78533 232 13 0.8707056 388 15 0.87484 474 15 0.86330 394 15 0.90419 398 15 0.901458 406 15 0.8721356 0.847397 0.8013711 0.91151 0.940683 0.890581 0.8723988 0.889437 0.802092 0.76063 0.923302 0.781310 0.8577218 NA 0.920126 0.917469 0.843642 0.93434 0.901594 0.86282 0.913295 0.832641 0.893061 0.91141 0.84513 0.87725 0.8873128 0.970357 0.84993 0.94097 0.9184892 0.8503141 0.83463 0.7505943 0.7259025 0.81794 0.8058302 0.78813 0.8935775 0.85970 0.89309 0.91432 0.9413909 3 0.870424 0.8664820 0.0013245 13 0.863001 0.8091549 0.05384620 0.761649 0.79152 insignificant 1 1 insignificant 0.81523 0.3223987 insignificant 1 1 insignificant -0.0154915 0.506146 insignificant 1 insignificant 0.870451 0.8125728 0.0570674 14 0.855846 0.8138730 0.0419727 1.3714e-05 9.5329e-01 weaklyHypermeth 2.2856e-03 1.0000e+00 weaklyHypermeth 0.0072522 5.2130e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.007038 7.9608e-01 insignificant 1.000e+00 insignificant 0.870451 0.8975728 -0.0207046 14 0.855846 0.88164 -0.0257908 0.951583 0.075218 insignificant 1 1 insignificant 0.437093 0.2869353 insignificant 1 1 insignificant -0.0420944 0.0411744 weaklyHypometh 1 insignificant 0.8668885 0.8125728 0.0613791 13 0.8503755 0.8138730 0.0365026 1.0278e-04 9.4195e-01 weaklyHypermeth 1.2848e-02 1.0000e+00 weaklyHypermeth 0.0030751 7.1559e-01 weaklyHypermeth 0.73074 1.0000e+00 insignificant 0.0225295 3.8877e-01 insignificant 1.0000e+00 insignificant 0.8668885 0.8975728 -0.0202485 13 0.8503755 0.88164 -0.0312609 0.98756 0.1597422 insignificant 1 1.00000 insignificant 0.594960 0.89738 insignificant 1 1 insignificant -0.026603 0.140632 insignificant 1 insignificant 0.8125728 0.8975728 -7.5155e-02 14 0.8138730 0.88164 -0.06776349 9.9776e-01 1.6462e-04 weaklyHypometh 1.0000e+00 0.023069 weaklyHypometh 6.9411e-01 0.035232 weaklyHypometh 1.0000e+00 1 insignificant -0.04913242 6.1030e-02 insignificant 1.0000000 insignificant chr2 182465701 182466701 26964 SSFA2 ENSG00000138434 0.0040816 245 7 0.016703 246 7 0.004329 197 7 0.00000 42 7 0.039683 118 7 0.019164 241 7 0.0056022 228 7 0.011132 183 7 0.014406 293 7 0.00000 240 7 0.014041 293 7 0.016184 265 7 0.005291 222 7 NA 0 0 0.019048 291 7 0.032313 263 7 0.021511 225 7 0.00000 81 7 0.00881 177 7 0.00000 247 7 0.023810 33 4 0.020408 76 7 0.029244 207 7 0.00000 105 6 0.00000 31 3 0.00000 247 7 0.005291 107 6 0.088435 49 6 0.015455 161 7 0.00000 345 7 0.0029155 247 7 0.0071429 272 7 0.00000 267 7 0.0044643 213 7 0.00000 30 3 0.00000 46 6 0.017857 63 7 0.00000 288 7 0.0033223 258 7 0.00000 220 7 0.00000 116 7 0.00000 162 7 0.010989 128 7 0.0043206 0.014559 0.0045824 0.00000 0.031165 0.021193 0.0066954 0.011783 0.015521 0.00000 0.013203 0.011482 0.0056007 NA 0.009756 0.023055 0.012700 0.00000 0.006808 0.00000 0.025203 0.010453 0.031653 0.00000 0.00000 0.00000 0.0063234 0.067596 0.01636 0.00000 0.0030861 0.0085366 0.00000 0.0022866 0.0022866 0.00000 0.0091463 0.00000 0.0035167 0.00000 0.00000 0.00000 0.0056285 6 0.011472 0.0090426 0.0024748 7 0.012678 0.0089585 0.00371917 0.554380 0.64771 insignificant 1 1 insignificant 0.68748 0.6689712 insignificant 1 1 insignificant -0.0038323 0.624776 insignificant 1 insignificant 0.011472 0.0022051 0.0093504 7 0.012678 0.0028289 0.0098488 2.5892e-02 9.9953e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0451568 9.9928e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.008506 4.6308e-02 weaklyHypermeth 1.000e+00 insignificant 0.011472 0.0022624 0.0099518 7 0.012678 0.00227 0.0104077 0.051857 0.988728 insignificant 1 1 insignificant 0.073387 0.9970182 insignificant 1 1 insignificant 0.0093639 0.0121664 weaklyHypermeth 1 insignificant 0.0090426 0.0022051 0.0068942 7 0.0089585 0.0028289 0.0061297 8.1436e-02 9.9109e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0694091 9.9290e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0123383 1.3560e-01 insignificant 1.0000e+00 insignificant 0.0090426 0.0022624 0.0068915 7 0.0089585 0.00227 0.0066885 0.11740 0.9887926 insignificant 1 1.00000 insignificant 0.123167 0.99548 insignificant 1 1 insignificant 0.013196 0.103849 insignificant 1 insignificant 0.0022051 0.0022624 -4.0423e-05 7 0.0028289 0.00227 0.00055887 9.9963e-01 9.7495e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9960e-01 0.995928 insignificant 1.0000e+00 1 insignificant 0.00085798 8.1790e-01 insignificant 1.0000000 insignificant chr2 193849900 193850900 27506 TMEFF2 ENSG00000144339 0.91264 342 6 0.79908 248 6 0.76497 129 6 0.91705 247 6 0.79236 72 6 0.93494 378 6 0.84690 142 6 0.91768 194 6 0.81502 135 6 0.83187 183 6 0.93673 310 6 0.67702 68 6 0.91465 250 6 0.8697 140 6 0.93127 229 6 0.54167 84 6 0.85412 2374 6 0.89490 416 6 0.82537 362 6 0.92333 332 6 0.83333 44 3 0.97203 79 3 0.85628 120 6 0.91667 58 6 0.96324 42 2 0.94155 312 6 0.96276 143 6 0.79167 32 3 0.75259 476 6 0.96104 367 6 0.93951 353 6 0.81477 237 6 0.83174 212 6 0.6019 219 6 0.25962 89 4 0.88095 18 2 0.70833 58 3 0.88789 358 6 0.95393 402 6 0.92340 300 6 0.83219 408 6 0.83075 428 6 0.9348 329 6 0.92217 0.81494 0.8071 0.94192 0.82973 0.91644 0.86308 0.91171 0.84607 0.85740 0.94036 0.71993 0.91246 0.88388 0.93953 0.68106 0.82089 0.91104 0.83134 0.92882 0.85911 0.95502 0.86084 0.91237 0.92116 0.95955 0.94569 0.92440 0.89004 0.95513 0.94654 0.81427 0.81803 0.56490 0.48402 0.74410 0.74498 0.90051 0.96292 0.92806 0.85551 0.82509 0.93408 3 0.90595 0.90664 -0.028079 6 0.89846 0.90386 -0.0053939 0.22292 0.26176 insignificant 1 1 insignificant 0.99835 0.00032823 weaklyHypometh 1 0.32823 insignificant -0.047056 0.14720 lowCoverage 1 lowCoverage 0.90595 0.74082 0.135546 6 0.89846 0.78021 0.11826 6.8837e-08 0.99995 weaklyHypermeth 2.1922e-05 1 weaklyHypermeth 0.0022237 0.99912 weaklyHypermeth 0.37062 1 insignificant 0.149993 0.19076 lowCoverage 1 lowCoverage 0.90595 0.89341 0.011640 6 0.89846 0.89878 -0.00031016 0.16940 0.91925 insignificant 1 1 insignificant 0.96617 0.51815 insignificant 1 1 insignificant -0.049953 0.17622 insignificant 1 insignificant 0.90632 0.74109 0.164816 6 0.87421 0.80768 0.066527 3.2767e-05 0.99612 weaklyHypermeth 0.0032767 1 weaklyHypermeth 0.00013186 0.99942 weaklyHypermeth 0.026371 1 weaklyHypermeth 0.197048 0.10213 lowCoverage 1 lowCoverage 0.90664 0.89341 0.023584 6 0.90386 0.89878 0.0050838 0.23036 0.926699 insignificant 1 1 insignificant 0.088432 0.98208 insignificant 1 1 insignificant -0.002897 0.93507 lowCoverage 1 lowCoverage 0.74082 0.89341 -0.14097 6 0.78021 0.89878 -0.118566 0.99939 0.017651 weaklyHypometh 1 1.0000 insignificant 0.99991 0.0080721 weaklyHypometh 1 1 insignificant -0.199945 0.099086 lowCoverage 1 lowCoverage chr2 197850542 197851542 27695 ANKRD44 ENSG00000065413 0.63042 174 5 0.56424 92 5 0.60714 55 5 0.68667 77 5 0.81616 35 3 0.68770 219 5 0.62895 66 5 0.71338 89 5 0.58048 79 5 0.73967 66 5 0.67165 133 5 0.66250 71 5 0.69052 87 5 NA 0 0 0.63418 89 5 0.72889 35 3 0.65119 73 5 0.65984 68 5 0.67700 120 5 0.66648 210 5 0.66667 32 3 0.51056 38 5 0.64871 118 5 0.69167 27 3 0.80714 31 4 0.55675 108 5 0.66840 34 5 0.66611 27 3 0.57249 62 5 0.62925 137 5 0.66415 151 5 0.67240 242 5 0.72643 55 5 0.6093 66 5 0.67590 99 5 0.61674 76 5 0.56591 29 3 0.54005 146 5 0.71367 174 5 0.63074 160 5 0.66790 90 5 0.75269 137 5 0.6543 123 5 0.66702 0.60378 0.6435 0.72229 0.84661 0.72358 0.64174 0.74811 0.63507 0.77168 0.69610 0.68959 0.72713 NA 0.67923 0.75611 0.70204 0.69806 0.70834 0.70580 0.72857 0.52946 0.69675 0.73601 0.79796 0.60151 0.68436 0.69619 0.61244 0.67694 0.70001 0.70282 0.74987 0.61888 0.69489 0.65272 0.63052 0.57131 0.75485 0.67315 0.70043 0.78084 0.69770 3 0.67628 0.65641 0.024423 5 0.66592 0.63986 0.0260589 0.11032 0.91630 insignificant 1 1 insignificant 0.10866 0.66350491 insignificant 1 1.00000 insignificant 0.022076 0.39745 lowCoverage 1 lowCoverage 0.67628 0.61783 0.063469 5 0.66592 0.61426 0.05166 2.9957e-03 0.97654 weaklyHypermeth 2.7234e-01 1 insignificant 0.0520974 0.92446 insignificant 1.00000 1 insignificant 0.045879 0.18265 lowCoverage 1 lowCoverage 0.67628 0.69152 -0.023513 5 0.66592 0.68608 -0.02016226 0.91576 0.19608 insignificant 1 1 insignificant 0.89035 0.40956 insignificant 1 1 insignificant -0.015594 0.56126 lowCoverage 1 lowCoverage 0.65641 0.61783 0.039686 5 0.63986 0.61426 0.025602 9.4240e-02 0.84329 insignificant 1.0000000 1 insignificant 0.33330915 0.77718 insignificant 1.000000 1 insignificant 0.023803 0.51772 lowCoverage 1 lowCoverage 0.65641 0.69152 -0.050901 5 0.63986 0.68608 -0.0462211 0.98209 0.079671 insignificant 1 1 insignificant 0.935626 0.14840 insignificant 1 1 insignificant -0.037670 0.24615 lowCoverage 1 lowCoverage 0.61783 0.69152 -0.09214 5 0.61426 0.68608 -0.071823 0.99202 0.007174 weaklyHypometh 1 0.7971 insignificant 0.98647 0.0307907 weaklyHypometh 1 1 insignificant -0.061473 0.119787 lowCoverage 1 lowCoverage chr2 201042651 201043651 28164 SPATS2L ENSG00000196141 0.92529 314 7 0.83923 608 7 0.81126 291 7 0.93904 226 7 0.95427 257 7 0.87797 360 7 0.92590 227 7 0.88772 345 7 0.90188 293 7 0.92827 213 7 0.89538 378 7 0.90511 111 7 0.95858 212 7 0.93036 189 7 0.90623 390 7 0.72789 79 7 1.00000 11 0 0.79849 294 7 0.91198 371 7 0.89160 229 7 0.94286 34 6 0.79597 121 7 0.88259 160 7 0.93648 120 7 1.00000 30 3 0.93179 475 7 0.81393 240 7 0.90658 189 7 0.88155 318 7 0.95462 583 7 0.95292 445 7 0.92611 360 7 0.59957 326 7 0.76571 115 7 0.99859 510 6 0.00000 1 0 0.80338 308 7 0.82026 380 7 0.89317 174 7 0.85114 116 7 0.94092 229 7 0.82764 183 7 0.85334 183 7 0.92911 0.84201 0.81061 0.93599 0.94913 0.88132 0.92538 0.88846 0.90206 0.91768 0.89241 0.90626 0.95702 0.93094 0.90546 0.72953 0.95163 0.79775 0.91191 0.89409 0.94257 0.79782 0.88705 0.93616 1.00000 0.92158 0.80721 0.90460 0.88354 0.94839 0.95154 0.92449 0.60512 0.78046 0.96806 NA 0.80892 0.82396 0.89282 0.84811 0.93927 0.82554 0.85248 7 0.89070 0.91642 -0.02593511 7 0.90258 0.92684 -0.02425565 0.99881 0.013862 weaklyHypometh 1 1 insignificant 0.99880 0.046796 weaklyHypometh 1 1 insignificant -0.014628 0.511485 insignificant 1 insignificant 0.89064 0.83171 0.066666 7 0.88866 0.79483 0.093829 4.9467e-06 0.9123249 weaklyHypermeth 0.00070667 1.00000 weaklyHypermeth 0.026342 0.9908394 weaklyHypermeth 1 1.00000 insignificant 0.231236 0.16670 insignificant 1 insignificant 0.89064 0.87119 0.0234415 7 0.88866 0.87613 0.0125289 9.3126e-02 0.8759912 insignificant 1.0000e+00 1.00000 insignificant 0.02030709 0.9232577 weaklyHypermeth 1.00000 1.00000 insignificant 0.022578 0.3782556 insignificant 1.00000 insignificant 0.91637 0.83171 0.09353574 7 0.91638 0.79483 0.12155021 1.1978e-05 0.9861443 weaklyHypermeth 0.0017111 1.00000 weaklyHypermeth 0.0049264 0.997595 weaklyHypermeth 0.48465 1 insignificant 0.2458634 0.14625 insignificant 1 insignificant 0.91637 0.87119 0.0457027 7 0.91638 0.87613 0.0402497 8.9151e-03 0.9991555 weaklyHypermeth 8.9151e-01 1.00000 insignificant 0.00620839 0.997924 weaklyHypermeth 0.62084 1 insignificant 0.037206 0.186029 insignificant 1 insignificant 0.83171 0.87119 -0.016471 7 0.79483 0.87613 -0.081301 0.539173 0.04035292 weaklyHypometh 1 1.000000 insignificant 0.63553 0.2982957 insignificant 1 1.0000 insignificant -0.2086575 0.20521 insignificant 1 insignificant chr2 202474671 202475671 28206 ENSG00000221374 0.57706 88 5 0.62804 119 5 0.47000 82 5 0.53596 77 5 0.51713 61 5 0.60935 217 5 0.47953 105 5 0.56826 116 5 0.59592 33 4 0.62000 28 3 0.67161 256 5 0.66667 25 2 0.71867 61 5 0.55952 21 1 0.70752 51 5 0.41667 24 4 0.62500 7 0 0.53132 60 5 0.52571 65 5 0.55033 180 5 0.57143 35 4 0.63333 43 4 0.58168 76 5 0.65926 47 4 0.71667 44 4 0.77163 133 5 0.58095 38 2 0.79167 10 0 0.56389 53 2 0.63694 172 5 0.68189 139 5 0.60659 199 5 0.65756 71 5 0.75681 64 4 0.74343 119 5 0.43750 12 0 0.79804 67 4 0.72316 143 5 0.60297 70 5 0.62091 70 5 0.65956 63 5 0.45000 16 1 0.66423 92 5 0.61615 0.65462 0.48243 0.59099 0.57550 0.63650 0.53664 0.60406 0.60824 0.67117 0.68455 0.56306 0.74140 0.59041 0.71581 0.46868 0.72094 0.54897 0.54719 0.57963 0.61068 0.61111 0.61110 0.63814 0.72133 0.69441 0.61583 0.76840 0.59309 0.70028 0.66422 0.65055 0.69560 0.76958 0.77382 0.56798 0.74487 0.72770 0.63014 0.62952 0.70101 0.43919 0.66967 0 0.63425 0.69565 -0.03734572 5 0.61053 0.66943 -0.05890236 0.82638 0.044621 weaklyHypometh 1 1 insignificant 0.93470 0.094285 insignificant 1 1 insignificant -0.070948 0.020293 lowCoverage 1 lowCoverage 0.63479 0.78782 -0.125602 5 0.65672 0.76352 -0.106797 9.9998e-01 0.0010009 weaklyHypometh 1.00000000 0.11121 insignificant 0.999971 0.0072045 weaklyHypometh 1 0.90056 insignificant -0.107372 0.10268 lowCoverage 1 lowCoverage 0.63413 0.65595 -0.0435913 5 0.58807 0.64090 -0.0528344 4.3216e-01 0.0209128 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.84708955 0.3389897 insignificant 1.00000 1.00000 insignificant -0.020820 0.6458689 lowCoverage 1.00000 lowCoverage 0.69442 0.78782 -0.09185073 5 0.61433 0.76352 -0.14918879 9.8590e-01 0.0044631 weaklyHypometh 1.0000000 0.55789 insignificant 0.9923717 0.081096 insignificant 1.00000 1 insignificant -0.0364241 0.54818 lowCoverage 1 lowCoverage 0.69521 0.65595 0.0017241 5 0.63720 0.64090 -0.0037044 1.5646e-01 0.1688462 insignificant 1.0000e+00 1.00000 insignificant 0.40294261 0.762888 insignificant 1.00000 1 insignificant 0.050128 0.303746 lowCoverage 1 lowCoverage 0.78737 0.65595 0.080721 5 0.71622 0.64090 0.075322 0.020990 0.81962421 weaklyHypermeth 1 1.000000 insignificant 0.13313 0.9798362 insignificant 1 1.0000 insignificant 0.0865521 0.22338 lowCoverage 1 lowCoverage chr2 204929993 204930993 28424 ICOS ENSG00000163600 0.73348 163 4 0.83662 165 6 0.90467 93 4 0.65619 132 6 0.93333 38 4 0.89776 153 6 0.81373 72 4 0.75006 96 6 0.90540 65 3 0.86974 71 3 0.91567 112 6 0.67262 19 3 0.90085 73 2 1.00000 5 0 0.68831 61 3 0.96000 14 2 0.85000 20 2 0.88923 106 3 0.94626 95 3 0.77644 128 4 0.72500 12 1 0.90909 13 1 0.92333 76 4 0.80556 23 2 0.70331 63 5 0.89572 218 6 0.80556 34 3 1.00000 11 1 0.91436 130 6 0.92544 183 6 0.90552 241 6 0.90773 189 4 0.86035 171 6 0.86083 79 6 0.84220 59 3 0.52650 73 6 0.96429 59 6 0.40315 266 6 0.60172 153 6 0.72389 189 6 0.74332 141 4 0.87098 117 3 0.73396 169 6 0.79617 0.86801 0.85659 0.89241 0.91473 0.90143 0.75471 0.83330 0.82116 0.85456 0.87868 0.86110 0.85530 0.87325 0.85548 0.94884 0.87849 0.83590 0.88541 0.90186 0.78837 0.83510 0.89395 0.64341 0.80731 0.86068 0.93023 1.00000 0.86699 0.87118 0.85983 0.85736 0.76432 0.74512 0.79584 0.69720 0.94961 0.74588 0.82589 0.82717 0.76919 0.84685 0.85649 1 0.84236 0.85666 -0.00697012 4 0.76831 0.79285 -0.02453556 0.98563 0.317758 lowCoverage 1 1 lowCoverage 0.96512 0.792170 lowCoverage 1 1 lowCoverage -0.023367 0.499794 lowCoverage 1 lowCoverage 0.84377 0.69731 0.126516 4 0.84497 0.68892 0.156051 1.6198e-05 0.9996788 lowCoverage 0.00168745 1.00000 lowCoverage 0.036068 0.9974393 lowCoverage 1 1.00000 lowCoverage 0.102131 0.32077 lowCoverage 1 lowCoverage 0.84377 0.78414 0.0681429 4 0.84497 0.72728 0.1176922 4.1261e-07 0.7621745 lowCoverage 6.8768e-05 1.00000 lowCoverage 0.00053753 0.9043397 lowCoverage 0.07679 1.00000 lowCoverage 0.110244 0.0595542 lowCoverage 1.00000 lowCoverage 0.85859 0.69731 0.15545214 6 0.87652 0.68892 0.18759675 5.4976e-05 0.9997323 weaklyHypermeth 0.0067633 1.00000 weaklyHypermeth 0.0472772 0.996739 weaklyHypermeth 1.00000 1 insignificant 0.1254980 0.23447 lowCoverage 1 lowCoverage 0.85859 0.78414 0.0894684 4 0.87652 0.72728 0.1492379 1.0137e-08 0.8162081 lowCoverage 2.0275e-06 1.00000 lowCoverage 0.00048105 0.977425 lowCoverage 0.09621 1 lowCoverage 0.133611 0.031098 lowCoverage 1 lowCoverage 0.69731 0.78414 -0.054043 4 0.68892 0.72728 -0.038359 0.917936 0.07737961 lowCoverage 1 1.000000 lowCoverage 0.52492 0.4301741 lowCoverage 1 1.0000 lowCoverage 0.0081129 0.93797 insignificant 1 insignificant chr2 206157438 206158438 28704 ENSG00000208122 0.67154 152 5 0.63250 93 5 0.65236 72 5 0.54226 128 5 0.48810 61 4 0.69221 320 5 0.67297 86 5 0.43791 97 5 0.57421 90 5 0.52936 97 5 0.70402 124 5 0.62607 56 5 0.61706 100 5 0.88889 9 1 0.47290 88 5 0.63111 48 5 0.39462 95 5 0.39812 141 5 0.59947 186 5 0.71680 248 5 0.87143 29 4 0.59992 68 5 0.66777 119 5 0.62130 52 4 0.72513 56 4 0.59033 159 5 0.69328 57 4 0.66758 44 4 0.65136 119 5 0.65031 129 5 0.46971 203 5 0.61913 334 5 0.42965 98 5 0.58030 91 5 0.64056 134 5 0.80110 55 5 0.65773 59 4 0.63433 181 5 0.61805 152 5 0.67995 163 5 0.83027 147 5 0.73768 164 5 0.72296 196 5 0.74219 0.68689 0.55192 0.70374 0.72598 0.73002 0.73445 0.63841 0.66532 0.66649 0.74307 0.65991 0.70150 NA 0.70855 0.67639 0.60648 0.62938 0.65568 0.74288 0.78194 0.61538 0.68936 0.70546 0.68067 0.66679 0.63535 0.67144 0.69702 0.67548 0.68197 0.70803 0.63853 0.59699 0.66457 0.77172 0.57104 0.64971 0.67289 0.69463 0.86488 0.76641 0.74103 4 0.68704 0.68517 -0.00070787 5 0.52687 0.56109 -0.03422215 0.54495 0.282967 insignificant 1 1 insignificant 0.76425 0.024982 weaklyHypometh 1 1 insignificant -0.055147 0.161955 lowCoverage 1 lowCoverage 0.68704 0.65696 0.035422 5 0.52687 0.45262 0.074247 2.5341e-02 0.3157310 weaklyHypermeth 0.93854304 1.00000 insignificant 0.118166 0.2525412 insignificant 1 1.00000 insignificant -0.026820 0.64529 lowCoverage 1 lowCoverage 0.69119 0.75669 -0.0679627 5 0.64307 0.71653 -0.0734579 9.9470e-01 0.0023433 weaklyHypometh 1.0000e+00 0.78109 insignificant 0.99778537 0.0013766 weaklyHypometh 1.00000 0.68829 insignificant -0.120659 0.0222025 lowCoverage 1.00000 lowCoverage 0.68517 0.65696 0.03442806 5 0.56109 0.45262 0.10846906 5.2388e-02 0.8809669 insignificant 1.0000000 1.00000 insignificant 0.2641312 0.946828 insignificant 1.00000 1 insignificant 0.0283267 0.62748 lowCoverage 1 lowCoverage 0.68907 0.75669 -0.0651605 5 0.65220 0.71653 -0.0643348 9.9940e-01 0.0019614 weaklyHypometh 1.0000e+00 0.49034 insignificant 0.99270924 0.021436 weaklyHypometh 1.00000 1 insignificant -0.065513 0.172864 lowCoverage 1 lowCoverage 0.65909 0.75669 -0.098150 5 0.63367 0.71653 -0.082858 0.984651 0.00422464 weaklyHypometh 1 0.603519 insignificant 0.99765 0.0119268 weaklyHypometh 1 1.0000 insignificant -0.0938394 0.15597 lowCoverage 1 lowCoverage chr2 206325040 206326040 28757 NRP2 ENSG00000118257 0.85217 253 6 0.81041 232 7 0.91173 211 7 0.79090 218 4 0.84821 76 4 0.95721 329 6 0.87601 119 4 0.95593 167 4 0.89676 144 4 0.92495 69 4 0.79957 205 4 0.93477 66 4 0.94958 107 4 0.93176 89 4 0.96336 185 4 0.96053 68 4 0.75000 8 0 0.67238 222 4 0.89982 132 4 0.90556 264 6 0.95000 33 3 0.88631 80 4 0.93437 124 7 0.90563 69 4 0.91335 119 4 0.93139 295 7 0.79597 80 4 0.88466 81 4 0.83849 118 4 0.91676 293 7 0.89894 252 6 0.91919 240 6 0.92134 215 7 0.97917 84 4 0.92188 147 6 0.62500 42 1 0.89925 141 4 0.65740 270 7 0.91479 245 4 0.96686 151 4 0.93650 184 4 0.94163 193 4 0.95284 192 4 0.85866 0.71601 0.89438 0.93176 0.85442 0.93062 0.88141 0.95210 0.91024 0.93687 0.82169 0.93834 0.95726 0.94245 0.95956 0.96625 0.77863 0.91805 0.90143 0.93528 0.95725 0.89240 0.93444 0.91263 0.91478 0.93483 0.78636 0.89345 0.85050 0.92295 0.93758 0.88882 0.90450 0.98219 0.79127 0.71756 0.90978 0.82217 0.94845 0.94589 0.93221 0.91918 0.92856 4 0.90139 0.90975 -0.00259540 5 0.90518 0.90461 0.00057389 0.73387 0.648089 insignificant 1 1 insignificant 0.72085 0.403993 insignificant 1 1 insignificant -0.018340 0.406266 lowCoverage 1 lowCoverage 0.90139 0.83426 0.053277 5 0.90518 0.82407 0.081109 1.0806e-01 0.9040181 insignificant 1.00000000 1.00000 insignificant 0.936761 0.4655701 insignificant 1 1.00000 insignificant 0.045575 0.50746 lowCoverage 1 lowCoverage 0.90139 0.93368 -0.0343838 4 0.90518 0.94454 -0.0393587 9.9081e-01 0.0854931 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.99444179 0.0449005 lowCoverage 1.00000 1.00000 lowCoverage -0.062943 0.0042656 lowCoverage 0.53321 lowCoverage 0.90975 0.83426 0.07178786 6 0.90461 0.82407 0.08053520 1.2221e-01 0.8821698 insignificant 1.0000000 1.00000 insignificant 0.9392855 0.520423 insignificant 1.00000 1 insignificant 0.0639154 0.35566 lowCoverage 1 lowCoverage 0.90975 0.93368 -0.0306168 4 0.90461 0.94454 -0.0399326 9.6054e-01 0.0248341 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.99234702 0.070073 lowCoverage 1.00000 1 lowCoverage -0.044602 0.010345 lowCoverage 1 lowCoverage 0.83426 0.93368 -0.074714 4 0.82407 0.94454 -0.120468 0.996695 0.08247178 lowCoverage 1 1.000000 lowCoverage 0.96258 0.3297687 lowCoverage 1 1.0000 lowCoverage -0.1085178 0.14167 lowCoverage 1 lowCoverage chr2 207747346 207748346 28907 KLF7 ENSG00000118263 0.80313 225 10 0.70931 221 10 0.56967 172 10 0.74877 184 9 0.49375 26 2 0.73978 253 9 0.61061 77 4 0.78704 103 6 0.67778 37 6 0.86905 34 5 0.76581 210 6 0.41667 12 0 0.73512 85 6 0.63889 38 6 0.67381 49 6 0.44444 14 0 NA 0 0 0.78135 216 10 0.79585 81 6 0.70299 264 10 0.75628 42 5 0.77546 46 6 0.69136 154 10 0.59365 56 6 0.70864 58 6 0.77496 245 10 0.87753 48 3 0.46622 33 4 0.78311 89 6 0.72683 256 10 0.70447 246 10 0.80962 319 10 0.61158 181 10 0.89668 67 6 0.52164 183 10 0.25000 7 0 0.70080 85 6 0.78955 288 10 0.78836 213 9 0.79628 224 9 0.74398 178 9 0.75588 166 8 0.65153 149 7 0.79601 0.62108 0.41548 0.64235 0.63511 0.72127 0.62182 0.79655 0.68972 0.85372 0.76088 0.42553 0.69078 0.63728 0.69631 0.46454 NA 0.67933 0.76272 0.65857 0.69052 0.77482 0.64541 0.59843 0.72589 0.78807 0.82808 0.62310 0.78225 0.69956 0.67068 0.76306 0.58212 0.88576 0.27201 0.40253 0.64013 0.80651 0.77813 0.76659 0.70381 0.69840 0.50041 0 0.72925 0.74497 -0.01367588 9 0.73584 0.68734 0.04849060 0.69727 0.510214 insignificant 1 1 insignificant 0.70729 0.649057 insignificant 1 1 insignificant -0.040039 0.351791 insignificant 1 insignificant 0.72882 0.66461 0.066439 9 0.71682 0.69491 0.021910 2.2302e-02 0.9756048 weaklyHypermeth 0.89207120 1.00000 insignificant 0.098363 0.9800280 insignificant 1 1.00000 insignificant 0.053932 0.59878 insignificant 1 insignificant 0.72882 0.80323 -0.0409855 9 0.71682 0.78000 -0.0631807 9.8401e-01 0.0303881 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.99022666 0.2015623 insignificant 1.00000 1.00000 insignificant -0.064902 0.1143059 insignificant 1.00000 insignificant 0.74479 0.66461 0.07952600 10 0.67026 0.69491 -0.02465353 6.8648e-03 0.9998119 weaklyHypermeth 0.3120382 1.00000 insignificant 0.0652678 0.991230 insignificant 1.00000 1 insignificant 0.0939708 0.37271 insignificant 1 insignificant 0.74527 0.80323 -0.0360721 9 0.73844 0.78000 -0.0415627 7.8317e-01 0.0014681 weaklyHypometh 1.0000e+00 0.48937 insignificant 0.91231088 0.022567 weaklyHypometh 1.00000 1 insignificant -0.024862 0.547010 insignificant 1 insignificant 0.66337 0.80301 -0.108556 9 0.66440 0.75800 -0.093600 0.997592 0.00031097 weaklyHypometh 1 0.062194 weaklyHypometh 0.99727 0.0019606 weaklyHypometh 1 0.9803 insignificant -0.1188331 0.26504 insignificant 1 insignificant chr2 208435922 208436922 28997 ENSG00000188519 0.97476 326 5 0.94589 191 5 0.88444 168 5 0.92622 373 5 0.92398 98 5 0.95623 223 5 0.89721 177 5 0.92402 160 5 0.94515 120 5 0.98054 100 5 0.91003 197 5 0.96923 83 5 0.95479 123 5 NA 0 0 0.94980 111 5 0.92479 52 5 0.96000 60 5 0.91595 357 5 0.97492 119 5 0.95109 159 5 0.81899 64 5 0.83404 109 5 0.93353 122 5 0.97500 45 5 0.91778 84 5 0.95144 231 5 0.89206 113 5 0.92432 59 5 0.96369 168 5 0.95837 259 5 0.92393 239 5 0.94185 264 5 0.90123 142 5 0.96602 95 5 0.99775 310 5 0.90795 52 5 0.94873 94 5 0.78531 147 5 0.95390 284 5 0.93386 258 5 0.92612 313 5 0.96942 296 5 0.94046 402 5 0.97204 0.95142 0.90151 0.93176 0.93976 0.95289 0.90203 0.92358 0.95317 0.98017 0.91416 0.97398 0.95191 NA 0.95445 0.92509 0.94412 0.91077 0.98007 0.95634 0.78035 0.85961 0.93916 0.97886 0.90351 0.95421 0.90432 0.91813 0.96896 0.96161 0.93337 0.94706 0.90665 0.96829 0.99810 0.90548 0.95417 0.80779 0.95033 0.93007 0.92945 0.97100 0.94688 5 0.93838 0.93170 0.00820829 5 0.93811 0.92907 0.00903977 0.33921 0.924039 insignificant 1 1 insignificant 0.34990 0.902054 insignificant 1 1 insignificant 0.020891 0.196789 lowCoverage 1 lowCoverage 0.93838 0.92619 0.010715 5 0.93811 0.92950 0.008612 3.5991e-01 0.2792311 insignificant 1.00000000 1.00000 insignificant 0.449231 0.3624880 insignificant 1 1.00000 insignificant 0.022642 0.49504 lowCoverage 1 lowCoverage 0.93838 0.94462 -0.0066592 5 0.93811 0.94497 -0.0068597 8.7982e-01 0.4741121 insignificant 1.0000e+00 1.00000 insignificant 0.48516189 0.8178371 insignificant 1.00000 1.00000 insignificant -0.004275 0.6749639 lowCoverage 1.00000 lowCoverage 0.93170 0.92619 0.00015159 5 0.92907 0.92950 -0.00042769 6.7147e-01 0.2908714 insignificant 1.0000000 1.00000 insignificant 0.7476528 0.286236 insignificant 1.00000 1 insignificant 0.0017508 0.95970 insignificant 1 insignificant 0.93170 0.94462 -0.0144287 5 0.92907 0.94497 -0.0158995 9.5428e-01 0.2695641 insignificant 1.0000e+00 1.00000 insignificant 0.76027726 0.582201 insignificant 1.00000 1 insignificant -0.025166 0.139117 insignificant 1 insignificant 0.92619 0.94462 -0.017545 5 0.92950 0.94497 -0.015472 0.375479 0.61769353 insignificant 1 1.000000 insignificant 0.17937 0.8223068 insignificant 1 1.0000 insignificant -0.0269166 0.42470 insignificant 1 insignificant chr2 212085328 212086328 29212 CPS1 ENSG00000021826 0.933333 80 6 0.917248 172 6 0.9125000 32 4 0.906481 36 4 0.966667 24 4 0.9377585 64 6 0.821098 39 4 0.9884508 128 6 0.9391414 49 4 0.990741 75 6 0.9355699 269 6 0.764881 30 4 0.9713043 167 6 NA 0 0 0.738596 82 4 1.000000 16 0 0.916667 21 2 0.9791667 32 4 0.960682 139 6 0.9853968 106 6 0.9454966 43 5 1.000000 7 0 0.97105 123 6 1.000000 44 4 1.000000 8 0 0.95143636 200 6 0.95833 50 5 NA 0 0 0.951800 167 6 0.9529517 232 6 0.9265839 208 6 0.946063 167 6 0.829149 199 6 0.828369 127 6 0.81902 101 6 1.000000 3 0 0.90416667 33 4 0.91064214 297 6 0.875000 34 4 0.9052288 69 6 0.7777778 24 2 0.777778 24 4 0.976190 44 4 0.922727 0.892649 0.9204545 0.918561 0.9772727 0.928522 0.842668 0.9862333 0.9293388 0.984848 0.939197 0.774351 0.967535 NA 0.756459 1.0000000 0.9431818 0.965909 0.963693 0.976104 0.9306990 0.9926976 0.963983 1.000000 1.0000000 0.9401617 0.958333 NA 0.967137 0.9501296 0.91123146 0.9518612 0.8191972 0.812462 0.8019598 0.9250790 0.9147727 0.9027105 0.8750000 0.8979501 0.7954545 0.79545455 0.983766 0 0.9372197 0.9455564 -0.0104272 6 0.9390108 0.9515616 -0.01255086 0.619381 0.211023 insignificant 1 1 insignificant 0.921405 0.151405 insignificant 1 1 insignificant -0.03946408 0.044109 lowCoverage 1 lowCoverage 0.9372197 0.8592105 0.0781955 6 0.9390108 0.862106 0.0769051 1.8705e-06 9.9999e-01 weaklyHypermeth 1.0392e-04 1.0000e+00 weaklyHypermeth 1.5140e-04 0.99595899 weaklyHypermeth 1.2617e-02 1.000000 weaklyHypermeth 0.0426183 2.3477e-01 lowCoverage 1.00000000 lowCoverage 0.9372197 0.9025641 0.0341181 4 0.9390108 0.9041171 0.0348937 5.2273e-02 0.94624101 lowCoverage 1.0000000 1.00000 lowCoverage 0.0577063 0.90425247 lowCoverage 1.00000 1.00000 lowCoverage 0.0621147 0.19089868 lowCoverage 1.00000 lowCoverage 0.9455564 0.8592105 0.082947 6 0.9515616 0.862106 0.0894560 2.8432e-09 9.9998e-01 weaklyHypermeth 3.5540e-07 1.0000e+00 weaklyHypermeth 4.1089e-06 9.9919e-01 weaklyHypermeth 7.6983e-04 1.00000 weaklyHypermeth 0.0820824 3.4766e-02 lowCoverage 1.00000000 lowCoverage 0.9455564 0.9025641 0.04581678 4 0.9515616 0.9041171 0.0474445 7.6829e-03 0.958637 lowCoverage 0.59099195 1 lowCoverage 0.00692691 0.954368 lowCoverage 0.692691 1 lowCoverage 0.1015787 0.0553349 lowCoverage 1 lowCoverage 0.8592105 0.9025641 -0.04618738 4 0.862106 0.9041171 -0.04201145 0.94649748 3.1462e-02 lowCoverage 1.000000 8.0672e-01 lowCoverage 0.980122 2.4800e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.01949636 0.69477906 lowCoverage 1.000000 lowCoverage chr2 213725259 213726259 29419 IKZF2 ENSG00000030419 0.012500 222 10 0.005976 541 10 0.0061439 418 10 0.000000 133 8 0.014205 358 10 0.0039539 437 10 0.013055 591 10 0.0078671 426 10 0.0028986 376 10 0.012632 252 10 0.0076924 703 10 0.019780 416 10 0.0075499 375 10 0.0083333 89 3 0.015725 451 10 0.010220 541 10 0.000000 273 8 0.0043478 120 3 0.015561 307 10 0.0028302 300 10 0.0095238 124 10 0.033333 60 2 0.02854 235 10 0.021380 247 10 0.000000 16 2 0.00079365 677 10 0.00000 379 10 0.003125 132 9 0.011580 264 10 0.0063895 595 10 0.0020833 607 10 0.009384 401 10 0.009985 295 10 0.014301 287 9 0.00000 287 6 0.000000 8 0 0.00082645 351 9 0.00076923 444 10 0.010000 277 10 0.0024390 184 10 0.0060458 118 7 0.000000 82 3 0.000000 125 7 0.018858 0.004561 0.0074739 0.000000 0.0144571 0.013344 0.011999 0.0062365 0.0077117 0.015451 0.013047 0.010323 0.014437 0.011134 0.018930 0.0034110 0.0019123 0.015423 0.013637 0.010040 0.0061162 0.0071356 0.039887 0.011040 0.0021908 0.0021115 0.000000 0.011086 0.017590 0.0011879 0.00031855 0.0046525 0.0098926 0.014741 0.0020956 0.0020956 0.0029317 0.0027288 0.0015291 0.0064891 0.0166936 0.00038226 0.000000 2 0.0095511 0.0069575 0.0032010 10 0.0096405 0.0088273 0.00081325 0.120593 0.737818 insignificant 1 1 insignificant 0.182006 0.854048 insignificant 1 1 insignificant -0.00194749 0.587667 insignificant 1 insignificant 0.0095511 0.0059809 0.0041201 10 0.0096405 0.006581 0.0030595 5.1648e-02 2.4080e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3176e-01 0.63029152 insignificant 1.0000e+00 1.000000 insignificant 0.0042499 1.7332e-01 insignificant 1.00000000 insignificant 0.0095511 0.0063613 0.0044640 10 0.0096405 0.0073795 0.0022610 6.8108e-02 0.84071862 insignificant 1.0000000 1.00000 insignificant 0.0815110 0.99837673 insignificant 1.00000 1.00000 insignificant 0.0048666 0.06739939 insignificant 1.00000 insignificant 0.0069575 0.0059809 0.000995 10 0.0088273 0.006581 0.0022463 6.0560e-01 4.4020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0446e-01 7.0882e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0061974 1.5556e-01 insignificant 1.00000000 insignificant 0.0069575 0.0063613 0.00049394 10 0.0088273 0.0073795 0.0014477 6.3008e-01 0.951701 insignificant 1.00000000 1 insignificant 0.47297102 0.999387 insignificant 1.000000 1 insignificant 0.0068140 0.0938256 insignificant 1 insignificant 0.0059809 0.0063613 -0.00026787 10 0.006581 0.0073795 -0.00079852 0.29619324 7.9565e-01 insignificant 1.000000 1.0000e+00 insignificant 0.568514 9.7328e-01 insignificant 1 1.0000e+00 insignificant 0.00061662 0.85107953 insignificant 1.000000 insignificant chr2 214160713 214161713 29445 ENSG00000208087 0.747452 509 13 0.573238 227 11 0.6808612 174 13 0.793236 303 13 0.682993 91 11 0.7785451 461 13 0.737093 155 13 0.7394927 186 12 0.5682948 140 13 0.742721 155 12 0.8007284 378 13 0.833805 109 8 0.6993098 175 12 0.8285714 34 6 0.691481 213 13 0.823077 71 8 0.703624 122 8 0.8274649 217 13 0.721429 224 13 0.8012097 359 13 0.7102324 58 5 0.731469 134 13 0.75899 306 13 0.783547 106 9 0.810384 110 12 0.73084351 309 13 0.78170 129 7 0.668254 52 5 0.730249 181 9 0.7037287 203 13 0.7689949 314 13 0.751320 525 13 0.632893 180 12 0.630369 235 13 0.64374 257 13 0.786855 79 8 0.64339692 113 8 0.66148714 269 13 0.798210 376 13 0.8040327 389 13 0.7820070 377 13 0.805222 324 11 0.779624 382 13 0.775718 0.621507 0.7145178 0.817973 0.8221879 0.762749 0.768808 0.7564888 0.5597432 0.766169 0.811533 0.834291 0.788299 0.779625 0.734985 0.8434109 0.7120113 0.835101 0.780802 0.796386 0.7986236 0.7706962 0.780851 0.836563 0.7974428 0.8140015 0.809780 0.734958 0.741364 0.7652476 0.77339922 0.7872750 0.6550044 0.654167 0.6892724 0.7759262 0.6945475 0.7081396 0.8242896 0.8333992 0.8116789 0.82333165 0.837669 4 0.7583082 0.7815334 -0.0099557 13 0.7539472 0.7904580 -0.03651082 0.738543 0.285795 insignificant 1 1 insignificant 0.846732 0.298216 insignificant 1 1 insignificant -0.00541123 0.795419 insignificant 1 insignificant 0.7582597 0.6884378 0.0830791 13 0.7426063 0.680417 0.0621897 1.8177e-07 9.9966e-01 weaklyHypermeth 1.1361e-05 1.0000e+00 weaklyHypermeth 3.7439e-04 0.99636783 weaklyHypermeth 2.2023e-02 1.000000 weaklyHypermeth 0.0722740 3.5377e-02 weaklyHypermeth 1.00000000 insignificant 0.7581471 0.7850568 -0.0467359 13 0.7330825 0.7955264 -0.0624439 9.9697e-01 0.00754042 weaklyHypometh 1.0000000 1.00000 insignificant 0.9998380 0.00761688 weaklyHypometh 1.00000 1.00000 insignificant -0.0550877 0.00588819 weaklyHypometh 0.73602 insignificant 0.7812629 0.6884378 0.094176 13 0.7605234 0.680417 0.0801068 2.2204e-07 1.0000e+00 weaklyHypermeth 1.8503e-05 1.0000e+00 weaklyHypermeth 1.0523e-04 9.9997e-01 weaklyHypermeth 9.5668e-03 1.00000 weaklyHypermeth 0.0776852 2.2939e-02 weaklyHypermeth 0.95577642 insignificant 0.7813531 0.7851732 -0.03743521 13 0.7764885 0.8091580 -0.0326695 9.9944e-01 0.024725 weaklyHypometh 1.00000000 1 insignificant 0.99966133 0.136105 insignificant 1.000000 1 insignificant -0.0496765 0.0014577 weaklyHypometh 1 insignificant 0.6881625 0.7849404 -0.12969087 13 0.655833 0.7797977 -0.12396438 0.99999632 6.7636e-09 weaklyHypometh 1.000000 2.2545e-06 weaklyHypometh 0.999999 2.4505e-06 weaklyHypometh 1 1.2253e-03 weaklyHypometh -0.12736174 0.00294509 weaklyHypometh 0.471672 insignificant chr2 215457140 215458140 29564 ENSG00000207274 0.862581 117 5 0.834321 188 5 0.8546538 78 3 0.875817 46 3 0.980000 29 3 0.8889440 82 5 0.772857 39 5 0.9340927 126 5 0.9600000 23 3 0.900682 82 5 0.9158482 214 5 0.763333 32 4 0.9534420 152 5 NA 0 0 0.924444 53 5 0.937500 11 0 0.804762 21 1 0.9294118 45 3 0.938636 122 5 0.8772849 122 5 0.9600000 43 5 1.000000 14 2 0.88175 76 5 0.916667 20 1 0.916667 9 0 0.92153971 257 5 0.89978 89 5 0.960000 14 1 0.962943 159 5 0.9517385 305 5 0.9173825 198 5 0.889274 140 5 0.839205 156 5 0.784139 123 5 0.86993 111 5 0.777778 8 0 0.88269231 36 4 0.88195160 246 5 0.931034 74 5 0.9471154 93 5 0.9104072 41 2 0.950000 35 4 0.729055 65 2 0.844016 0.818694 0.8314274 0.792020 0.9626866 0.838348 0.779957 0.9270386 0.9253731 0.905734 0.906409 0.795771 0.938325 NA 0.872471 0.8970289 0.7924662 0.868306 0.918080 0.860902 0.9253731 1.0000000 0.874637 0.878109 0.8954911 0.9205202 0.887441 0.925373 0.948891 0.9334033 0.90860873 0.8542369 0.7913840 0.756479 0.8492874 0.7191361 0.7979334 0.8672352 0.8713330 0.9362801 0.8535152 0.90671642 0.664903 0 0.8780025 0.9169184 -0.0390304 5 0.8925040 0.9264235 -0.03391952 0.997581 0.018532 weaklyHypometh 1 1 insignificant 0.994133 0.058487 insignificant 1 1 insignificant -0.04155124 0.024727 lowCoverage 1 lowCoverage 0.8780025 0.8279412 0.0501122 5 0.8925040 0.848824 0.0436804 1.2028e-02 9.8085e-01 weaklyHypermeth 2.7336e-01 1.0000e+00 insignificant 7.4527e-03 0.99741637 weaklyHypermeth 3.1053e-01 1.000000 insignificant 0.0506443 6.0647e-02 lowCoverage 1.00000000 lowCoverage 0.8780025 0.8376623 0.0331139 5 0.8925040 0.8956659 -0.0031619 3.6722e-01 0.10681920 insignificant 1.0000000 1.00000 insignificant 0.6415255 0.28045530 insignificant 1.00000 1.00000 insignificant -0.0035955 0.93818060 lowCoverage 1.00000 lowCoverage 0.9169184 0.8279412 0.091782 5 0.9264235 0.848824 0.0775999 1.0629e-06 9.9990e-01 weaklyHypermeth 6.6433e-05 1.0000e+00 weaklyHypermeth 4.5050e-04 9.9995e-01 weaklyHypermeth 3.2179e-02 1.00000 weaklyHypermeth 0.0921955 3.2281e-03 lowCoverage 0.23057654 lowCoverage 0.9169184 0.8376623 0.07319040 5 0.9264235 0.8956659 0.0307576 5.2644e-02 0.362779 insignificant 1.00000000 1 insignificant 0.18395343 0.561572 insignificant 1.000000 1 insignificant 0.0379557 0.4216054 lowCoverage 1 lowCoverage 0.8279412 0.8376623 -0.02042979 5 0.848824 0.8956659 -0.04684233 0.98009628 1.2793e-02 weaklyHypometh 1.000000 4.4113e-01 insignificant 0.996202 3.5786e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.05423978 0.28564624 lowCoverage 1.000000 lowCoverage chr2 218773629 218774629 29757 ENSG00000208079 0.709503 104 5 0.683767 72 5 0.6959596 50 5 0.796104 73 5 0.683333 36 2 0.8194402 73 5 0.692857 39 2 0.8347311 83 5 0.6433333 31 2 0.900000 22 3 0.8330236 104 5 0.800000 7 0 0.7507937 63 5 0.7939394 40 5 0.657407 38 4 1.000000 5 0 1.000000 3 0 0.8131771 105 4 0.914286 24 2 0.8177778 42 2 0.6916667 24 3 1.000000 13 0 0.87826 49 2 0.633333 26 3 0.892500 39 2 0.69836691 74 5 0.72500 19 2 0.625000 16 1 0.701190 66 5 0.6742424 80 5 0.5942424 69 5 0.581979 55 5 0.640476 78 5 0.805556 60 5 0.64762 78 5 0.666667 6 0 0.80506073 76 3 0.70000000 63 5 0.745571 70 5 0.7972308 69 5 0.8341830 72 2 0.722308 63 2 0.852308 67 5 0.701636 0.679612 0.6954682 0.777992 0.6509009 0.769567 0.746139 0.7852376 0.6725225 0.932432 0.816529 0.864865 0.818533 0.801802 0.776276 1.0000000 0.8732593 0.764046 0.872587 0.783183 0.8445946 1.0000000 0.819036 0.671171 0.8402027 0.6959686 0.753378 0.790541 0.694820 0.8194103 0.61306306 0.6906352 0.6412484 0.751502 0.6383526 0.7019520 0.7507659 0.7342342 0.7607915 0.7796674 0.7988130 0.70883576 0.812890 0 0.7652860 0.7264151 0.0445616 5 0.7517486 0.5163992 0.23534938 0.045001 0.996906 weaklyHypermeth 1 1 insignificant 0.127187 0.860073 insignificant 1 1 insignificant 0.06732311 0.146074 lowCoverage 1 lowCoverage 0.7661692 0.6897507 0.0770456 5 0.7724480 0.698784 0.0736644 1.9544e-03 9.9548e-01 weaklyHypermeth 5.0112e-02 1.0000e+00 weaklyHypermeth 7.2742e-02 0.99285529 insignificant 1.0000e+00 1.000000 insignificant 0.0810753 6.0476e-02 lowCoverage 1.00000000 lowCoverage 0.7643564 0.7653959 -0.0069483 5 0.7103733 0.8182012 -0.1078279 9.0641e-01 0.31237684 insignificant 1.0000000 1.00000 insignificant 0.7543236 0.54827763 insignificant 1.00000 1.00000 insignificant 0.0016515 0.96234251 lowCoverage 1.00000 lowCoverage 0.7319392 0.6897507 0.041817 5 0.7229589 0.698784 0.0241753 6.4373e-02 7.3899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2290e-01 9.0824e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0137522 7.8209e-01 lowCoverage 1.00000000 lowCoverage 0.7291667 0.7653959 -0.04711574 5 0.6024657 0.8182012 -0.2157355 9.9465e-01 0.191741 insignificant 1.00000000 1 insignificant 0.90027049 0.494757 insignificant 1.000000 1 insignificant -0.0656716 0.1673782 lowCoverage 1 lowCoverage 0.6897507 0.7647059 -0.08750829 5 0.698784 0.7818415 -0.08305787 0.99151565 1.7220e-02 weaklyHypometh 1.000000 5.2182e-01 insignificant 0.992132 1.4564e-01 insignificant 1 1.0000e+00 insignificant -0.07942376 0.07746536 lowCoverage 1.000000 lowCoverage chr2 218975158 218976158 29761 MIR26B ENSG00000199121 0.941268 371 11 0.889617 531 12 0.8565673 414 12 0.916856 330 11 0.915803 291 11 0.9277787 697 11 0.885524 389 12 0.9171899 332 12 0.8983069 348 12 0.930882 313 11 0.8354967 547 12 0.953564 200 11 0.9535810 281 11 0.9243690 184 9 0.906527 336 11 0.872478 235 12 0.786667 43 3 0.9120674 335 11 0.889521 381 11 0.9668099 454 11 0.9351067 226 12 0.965162 91 6 0.94432 337 12 0.968799 126 10 0.860053 147 9 0.92680029 556 12 0.86482 236 12 0.897023 218 12 0.938848 333 11 0.9310035 570 12 0.9315555 653 11 0.947799 591 11 0.463687 429 12 0.588618 497 12 0.77663 600 9 0.538805 67 4 0.60084921 345 12 0.63165908 644 12 0.924011 345 11 0.9451397 428 11 0.9704864 214 11 0.886882 386 9 0.950364 327 11 0.933073 0.880611 0.8841301 0.928664 0.9020665 0.917438 0.889856 0.9307104 0.9196458 0.924036 0.912689 0.945784 0.964010 0.920697 0.908631 0.8653741 0.8997251 0.912398 0.896388 0.954385 0.9121284 0.9461981 0.944263 0.966199 0.9417297 0.9162522 0.870084 0.915201 0.939612 0.9213956 0.90797134 0.9446563 0.3822296 0.467984 0.6844385 0.5849738 0.5423973 0.6529639 0.9196683 0.9372256 0.9495481 0.88816355 0.933942 9 0.9128637 0.9240940 -0.0110978 11 0.8386046 0.8558690 -0.01726445 0.972917 0.019151 weaklyHypometh 1 1 insignificant 0.991002 0.014589 weaklyHypometh 1 1 insignificant -0.02189666 0.127262 insignificant 1 insignificant 0.9131241 0.5414407 0.3661267 11 0.9084883 0.607601 0.3008878 4.7101e-43 9.9995e-01 hypermethylated 4.7101e-40 1.0000e+00 hypermethylated 1.2532e-15 0.99974371 hypermethylated 1.2532e-12 1.000000 hypermethylated 0.3040028 6.3233e-04 hypermethylated 0.05269447 hypermethylated 0.9131241 0.9247059 -0.0116048 11 0.9084883 0.9390666 -0.0305783 9.6789e-01 0.00834948 weaklyHypometh 1.0000000 1.00000 insignificant 0.9891871 0.01785415 weaklyHypometh 1.00000 1.00000 insignificant -0.0313328 0.10434845 insignificant 1.00000 insignificant 0.9245468 0.5414407 0.379495 12 0.9271915 0.607601 0.3195909 8.3077e-32 9.9998e-01 hypermethylated 8.3077e-29 1.0000e+00 hypermethylated 1.8835e-14 1.0000e+00 hypermethylated 1.8835e-11 1.00000 hypermethylated 0.3258994 4.3225e-04 hypermethylated 0.04802754 hypermethylated 0.9245468 0.9247059 -0.00321597 11 0.9271915 0.9390666 -0.0118751 7.4080e-01 0.104795 insignificant 1.00000000 1 insignificant 0.85400496 0.431804 insignificant 1.000000 1 insignificant -0.0094362 0.6022028 insignificant 1 insignificant 0.5414407 0.9247059 -0.39320883 11 0.607601 0.9390666 -0.33146604 1.00000000 1.1975e-15 hypomethylated 1.000000 1.1975e-12 hypomethylated 1.000000 1.6786e-09 hypomethylated 1 1.6786e-06 hypomethylated -0.33533559 0.00028333 hypomethylated 0.094442 hypomethylated chr2 219224539 219225539 29771 ENSG00000208074 0.947355 316 7 0.896579 420 7 0.8806679 264 7 0.936980 204 7 0.903129 159 7 0.9184519 421 7 0.924675 217 7 0.8964664 251 7 0.8025270 199 7 0.919873 214 7 0.9041837 356 7 0.903419 175 6 0.9523282 320 7 0.9234893 65 2 0.930835 285 7 0.902411 118 7 0.901863 112 6 0.9729412 235 6 0.956704 270 7 0.9455467 353 7 0.9778770 100 7 0.885418 88 6 0.92269 288 7 0.903397 158 7 0.833167 59 4 0.92221721 373 7 0.86975 185 7 0.924758 123 7 0.901353 329 7 0.9345615 473 7 0.9217826 375 7 0.926617 411 7 0.892342 280 7 0.890088 202 7 0.87367 405 4 0.895176 68 4 0.75840247 203 7 0.89747457 385 7 0.942548 335 7 0.9629669 366 7 0.9590662 219 7 0.930104 265 7 0.906655 237 6 0.927433 0.897393 0.8747272 0.920543 0.8951328 0.897645 0.922522 0.8861937 0.8424822 0.902230 0.899548 0.885514 0.946132 0.924115 0.923389 0.8877689 0.8446497 0.950554 0.958182 0.937344 0.9709560 0.8524245 0.908383 0.858556 0.9162069 0.9267976 0.798835 0.917271 0.907591 0.9545401 0.91459840 0.9099550 0.9069640 0.862917 0.9109573 0.7987176 0.8255162 0.8940131 0.9388284 0.9690215 0.9447787 0.91604493 0.947677 5 0.9127977 0.9250506 -0.0101989 7 0.8883791 0.9352244 -0.04684530 0.909732 0.159130 insignificant 1 1 insignificant 0.750345 0.195534 insignificant 1 1 insignificant 0.00572169 0.668349 insignificant 1 insignificant 0.9127977 0.8716785 0.0398794 7 0.8883791 0.843668 0.0447111 2.0563e-03 7.8677e-01 weaklyHypermeth 5.0153e-02 1.0000e+00 weaklyHypermeth 4.5269e-01 0.27758864 insignificant 1.0000e+00 1.000000 insignificant 0.0481621 8.4316e-02 insignificant 1.00000000 insignificant 0.9129469 0.9521800 -0.0380550 7 0.9200523 0.9444664 -0.0244141 6.8078e-01 0.00080868 weaklyHypometh 1.0000000 0.40434 insignificant 0.9627231 0.00035274 weaklyHypometh 1.00000 0.17637 insignificant -0.0242468 0.09371480 insignificant 1.00000 insignificant 0.9250506 0.8716785 0.044825 7 0.9352244 0.843668 0.0915564 5.7706e-03 9.7929e-01 weaklyHypermeth 1.4796e-01 1.0000e+00 insignificant 3.6951e-01 3.4333e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0424405 1.2501e-01 insignificant 1.00000000 insignificant 0.9247458 0.9521800 -0.02549190 7 0.9259708 0.9444664 -0.0184957 8.9077e-01 0.093603 insignificant 1.00000000 1 insignificant 0.96716903 0.019306 weaklyHypometh 1.000000 1 insignificant -0.0299685 0.0634027 insignificant 1 insignificant 0.8720779 0.9521800 -0.06533936 7 0.868954 0.9444664 -0.07551254 0.99583008 4.7323e-03 weaklyHypometh 1.000000 2.2535e-01 insignificant 0.973878 1.0868e-01 insignificant 1 1.0000e+00 insignificant -0.07240895 0.02104508 weaklyHypometh 1.000000 insignificant chr2 219224724 219225724 29772 ENSG00000208074 0.947355 316 7 0.896579 420 7 0.8806679 264 7 0.936980 204 7 0.903129 159 7 0.9184519 421 7 0.924675 217 7 0.8964664 251 7 0.8025270 199 7 0.919873 214 7 0.9041837 356 7 0.903419 175 6 0.9523282 320 7 0.9234893 65 2 0.930835 285 7 0.902411 118 7 0.901863 112 6 0.9729412 235 6 0.956704 270 7 0.9455467 353 7 0.9778770 100 7 0.885418 88 6 0.92269 288 7 0.903397 158 7 0.833167 59 4 0.92221721 373 7 0.86975 185 7 0.924758 123 7 0.901353 329 7 0.9345615 473 7 0.9217826 375 7 0.926617 411 7 0.892342 280 7 0.890088 202 7 0.87367 405 4 0.895176 68 4 0.75840247 203 7 0.89747457 385 7 0.942548 335 7 0.9629669 366 7 0.9590662 219 7 0.930104 265 7 0.906655 237 6 0.927433 0.897393 0.8747272 0.920543 0.8951328 0.897645 0.922522 0.8861937 0.8424822 0.902230 0.899548 0.885514 0.946132 0.924115 0.923389 0.8877689 0.8446497 0.950554 0.958182 0.937344 0.9709560 0.8524245 0.908383 0.858556 0.9162069 0.9267976 0.798835 0.917271 0.907591 0.9545401 0.91459840 0.9099550 0.9069640 0.862917 0.9109573 0.7987176 0.8255162 0.8940131 0.9388284 0.9690215 0.9447787 0.91604493 0.947677 5 0.9127977 0.9250506 -0.0101989 7 0.8883791 0.9352244 -0.04684530 0.909732 0.159130 insignificant 1 1 insignificant 0.750345 0.195534 insignificant 1 1 insignificant 0.00572169 0.668349 insignificant 1 insignificant 0.9127977 0.8716785 0.0398794 7 0.8883791 0.843668 0.0447111 2.0563e-03 7.8677e-01 weaklyHypermeth 5.0153e-02 1.0000e+00 weaklyHypermeth 4.5269e-01 0.27758864 insignificant 1.0000e+00 1.000000 insignificant 0.0481621 8.4316e-02 insignificant 1.00000000 insignificant 0.9129469 0.9521800 -0.0380550 7 0.9200523 0.9444664 -0.0244141 6.8078e-01 0.00080868 weaklyHypometh 1.0000000 0.40434 insignificant 0.9627231 0.00035274 weaklyHypometh 1.00000 0.17637 insignificant -0.0242468 0.09371480 insignificant 1.00000 insignificant 0.9250506 0.8716785 0.044825 7 0.9352244 0.843668 0.0915564 5.7706e-03 9.7929e-01 weaklyHypermeth 1.4796e-01 1.0000e+00 insignificant 3.6951e-01 3.4333e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0424405 1.2501e-01 insignificant 1.00000000 insignificant 0.9247458 0.9521800 -0.02549190 7 0.9259708 0.9444664 -0.0184957 8.9077e-01 0.093603 insignificant 1.00000000 1 insignificant 0.96716903 0.019306 weaklyHypometh 1.000000 1 insignificant -0.0299685 0.0634027 insignificant 1 insignificant 0.8720779 0.9521800 -0.06533936 7 0.868954 0.9444664 -0.07551254 0.99583008 4.7323e-03 weaklyHypometh 1.000000 2.2535e-01 insignificant 0.973878 1.0868e-01 insignificant 1 1.0000e+00 insignificant -0.07240895 0.02104508 weaklyHypometh 1.000000 insignificant chr2 219467081 219468081 29786 WNT10A ENSG00000135925 0.236142 84 3 0.372768 100 5 0.4126211 109 5 0.388889 28 3 0.428801 69 5 0.4487302 74 5 0.472910 141 5 0.5623126 73 5 0.3622222 112 5 0.351709 113 5 0.3988394 141 5 0.422315 167 5 0.4077020 90 5 NA 0 0 0.384351 116 5 0.421048 130 5 0.464138 118 5 0.6250000 31 3 0.466340 118 5 0.4506163 134 5 0.5455556 53 5 0.116667 20 1 0.31181 131 5 0.456667 47 5 0.666667 12 0 0.44953569 106 5 0.43876 76 5 0.201667 36 4 0.466364 44 5 0.1588889 96 5 0.5091249 125 5 0.429183 147 5 0.867301 113 5 0.836345 119 5 0.69455 42 5 0.501364 37 3 0.79188095 82 4 0.44913755 93 5 0.547619 82 3 0.3974206 110 5 0.3835165 42 3 0.460988 73 5 0.545641 52 4 0.347698 0.284632 0.3232198 0.258294 0.3261467 0.465753 0.436906 0.4995658 0.2873950 0.253616 0.396270 0.371456 0.402900 NA 0.370864 0.3406193 0.3921814 0.571553 0.453823 0.364615 0.5420635 0.0273109 0.247944 0.394678 0.7335086 0.3820193 0.371017 0.213655 0.349618 0.1994865 0.41563791 0.3291991 0.8568878 0.838848 0.5929717 0.4864973 0.8663005 0.2043585 0.3855042 0.3359594 0.3129098 0.38656425 0.338591 2 0.4065708 0.3695409 0.0413621 5 0.4303183 0.3883059 0.04201244 0.080511 0.954604 insignificant 1 1 insignificant 0.198120 0.952548 insignificant 1 1 insignificant 0.02922131 0.577691 lowCoverage 1 lowCoverage 0.4065708 0.7283951 -0.2956290 5 0.4303183 0.707173 -0.2768551 1.0000e+00 6.8789e-13 hypomethylated 1.0000e+00 3.4395e-10 hypomethylated 9.9980e-01 0.00003021 hypomethylated 1.0000e+00 0.015449 hypomethylated -0.2649664 1.3269e-02 lowCoverage 0.62604484 lowCoverage 0.4065708 0.3649025 0.0140566 4 0.4303183 0.4604241 -0.0301058 4.8130e-01 0.18531786 lowCoverage 1.0000000 1.00000 lowCoverage 0.5874176 0.16722677 lowCoverage 1.00000 1.00000 lowCoverage -0.0419079 0.32824736 lowCoverage 1.00000 lowCoverage 0.3695409 0.7283951 -0.332013 5 0.3883059 0.707173 -0.3188675 1.0000e+00 2.1175e-08 hypomethylated 1.0000e+00 1.0587e-05 hypomethylated 9.9999e-01 6.2127e-05 hypomethylated 1.0000e+00 0.04186 hypomethylated -0.2941877 7.3565e-03 lowCoverage 0.40869519 lowCoverage 0.3695409 0.3649025 -0.03285389 4 0.3883059 0.4604241 -0.0721182 8.0595e-01 0.124560 lowCoverage 1.00000000 1 lowCoverage 0.74616584 0.078025 lowCoverage 1.000000 1 lowCoverage -0.0711292 0.2494223 lowCoverage 1 lowCoverage 0.7283951 0.3649025 0.30194969 4 0.707173 0.4604241 0.24674930 0.00070639 9.9966e-01 lowCoverage 0.176597 1.0000e+00 lowCoverage 0.013649 9.8289e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.22305848 0.02693820 lowCoverage 1.000000 lowCoverage chr2 219469154 219470154 29787 WNT10A ENSG00000135925 0.076746 355 12 0.092093 424 14 0.0503969 592 15 0.019998 399 16 0.022069 559 15 0.1659573 562 16 0.033514 499 15 0.0604740 528 15 0.0706235 539 14 0.014217 444 14 0.0316865 531 15 0.052445 346 14 0.0147026 364 14 0.0358216 349 14 0.023454 543 14 0.034099 288 15 0.047222 79 7 0.0567965 377 10 0.070145 544 16 0.1197631 549 17 0.0173611 236 14 0.024103 344 14 0.06885 366 17 0.030466 284 14 0.079212 213 14 0.05682164 714 16 0.10755 453 16 0.000000 314 15 0.102974 352 14 0.0699627 808 17 0.0612566 680 16 0.015925 647 16 0.095763 320 14 0.070343 313 14 0.19874 359 9 0.044839 206 9 0.21950383 243 14 0.02012525 610 17 0.016562 487 16 0.0049632 394 12 0.0058860 320 12 0.011523 355 12 0.030947 399 12 0.039808 0.013999 0.0482007 0.011836 0.0074103 0.050794 0.043175 0.0293811 0.0169661 0.015521 0.037411 0.032019 0.023499 0.032795 0.027340 0.0342624 0.0173832 0.013786 0.019733 0.022525 0.0084733 0.0092732 0.032215 0.027348 0.0128342 0.0087269 0.033393 0.000000 0.036229 0.0218608 0.01980148 0.0184078 0.0330322 0.071883 0.1887069 0.0719438 0.2855351 0.0158605 0.0151288 0.0016828 0.0095712 0.00951844 0.038032 10 0.0298895 0.0220085 0.0085693 16 0.0906108 0.0479595 0.04265133 0.059768 0.993796 insignificant 1 1 insignificant 0.074996 0.993296 insignificant 1 1 insignificant 0.00173791 0.896492 insignificant 1 insignificant 0.0297800 0.1321307 -0.1069334 16 0.0473066 0.099210 -0.0519037 9.7323e-01 2.7192e-07 weaklyHypometh 1.0000e+00 5.4385e-05 weaklyHypometh 9.1715e-01 0.04279477 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0536071 1.7626e-01 insignificant 1.00000000 insignificant 0.0283567 0.0138107 0.0112450 12 0.0419635 0.0146766 0.0272869 9.3042e-03 0.94736231 weaklyHypermeth 0.7157098 1.00000 insignificant 0.0140054 0.98840876 weaklyHypermeth 1.00000 1.00000 insignificant 0.0406349 0.00037384 weaklyHypermeth 0.18692 insignificant 0.0220126 0.1321307 -0.115025 16 0.0502433 0.099210 -0.0489670 9.9563e-01 3.0447e-05 weaklyHypometh 1.0000e+00 7.6118e-03 weaklyHypometh 9.8918e-01 2.1397e-02 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0553450 1.6686e-01 insignificant 1.00000000 insignificant 0.0207632 0.0138107 0.00346870 12 0.0356215 0.0146766 0.0209449 2.3229e-01 0.609299 insignificant 1.00000000 1 insignificant 0.31768202 0.846167 insignificant 1.000000 1 insignificant 0.0388970 0.0035643 weaklyHypermeth 1 insignificant 0.1287129 0.0138107 0.09387606 12 0.085190 0.0146766 0.07051318 0.00266152 9.9183e-01 weaklyHypermeth 0.532304 1.0000e+00 insignificant 0.009412 9.9045e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.09424206 0.03755575 weaklyHypermeth 1.000000 insignificant chr2 220020209 220021209 29829 SPEG ENSG00000072195 0.474285 245 9 0.621125 127 10 0.7651948 147 10 0.446247 315 9 0.785000 58 5 0.3799424 412 10 0.540182 129 9 0.6302052 232 10 0.5166752 177 10 0.709505 285 10 0.5755953 264 10 0.422140 226 10 0.8796945 233 10 0.6460073 161 10 0.937971 223 10 0.359947 111 5 0.359537 82 5 0.5213339 386 9 0.598288 125 10 0.5334579 244 10 0.5710714 74 8 0.439092 245 10 0.27254 200 9 0.351331 153 10 0.559829 90 9 0.81816416 94 10 0.62142 150 10 0.582164 164 10 0.678245 203 10 0.9121905 131 10 0.6488679 190 10 0.557561 275 10 0.652419 140 10 0.699360 204 10 0.65489 404 9 0.775942 81 7 0.50011279 163 9 0.83076217 111 9 0.635012 307 9 0.5414862 367 10 0.9176920 162 9 0.724722 277 9 0.522349 289 9 0.447465 0.613145 0.7428112 0.393776 0.8419689 0.355719 0.573076 0.6202983 0.5066519 0.682924 0.530195 0.364400 0.908194 0.626543 0.926295 0.3312901 0.3288000 0.484379 0.574860 0.653588 0.5921910 0.4048219 0.307610 0.409309 0.5789270 0.8209067 0.669547 0.602285 0.639523 0.9338885 0.61248722 0.5376697 0.6941087 0.749473 0.6141206 0.8292679 0.6084140 0.8732009 0.6647940 0.5160617 0.9036828 0.72173647 0.484905 9 0.5629187 0.5647537 -0.0042812 10 0.5195011 0.5147503 0.00475075 0.799057 0.850883 insignificant 1 1 insignificant 0.873132 0.837490 insignificant 1 1 insignificant 0.00074378 0.990757 insignificant 1 insignificant 0.5630232 0.6844968 -0.1407384 10 0.5649556 0.667208 -0.1022526 2.4932e-01 1.1043e-07 weaklyHypometh 1.0000e+00 2.7608e-05 weaklyHypometh 8.2435e-01 0.00011423 weaklyHypometh 1.0000e+00 0.035978 weaklyHypometh -0.1004643 1.1849e-01 insignificant 1.00000000 insignificant 0.5630534 0.6262482 -0.0714019 10 0.5714512 0.6297045 -0.0582533 9.0387e-01 0.06476510 insignificant 1.0000000 1.00000 insignificant 0.9655918 0.02243017 weaklyHypometh 1.00000 1.00000 insignificant -0.0831356 0.34268004 insignificant 1.00000 insignificant 0.5650407 0.6848320 -0.135921 10 0.5662254 0.683929 -0.1177037 4.8053e-01 1.1985e-07 weaklyHypometh 1.0000e+00 3.9950e-05 weaklyHypometh 8.4349e-01 8.3719e-05 weaklyHypometh 1.0000e+00 0.04186 weaklyHypometh -0.1012081 1.6730e-01 insignificant 1.00000000 insignificant 0.5650407 0.6262482 -0.05978820 10 0.5662254 0.6297045 -0.0634791 9.0158e-01 0.018443 weaklyHypometh 1.00000000 1 insignificant 0.98158947 0.028672 weaklyHypometh 1.000000 1 insignificant -0.0838794 0.3703838 insignificant 1 insignificant 0.6848320 0.6262482 0.07291200 10 0.683929 0.6297045 0.05422456 0.00016720 5.8401e-01 weaklyHypermeth 0.080842 1.0000e+00 weaklyHypermeth 0.029587 7.1525e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.01732873 0.84590532 insignificant 1.000000 insignificant chr2 220084275 220085275 29841 GMPPA ENSG00000144591 0.772876 62 2 0.353474 101 4 0.4100717 131 6 0.326877 68 2 0.503262 93 6 0.5759259 112 5 0.619947 110 6 0.5714646 84 4 0.6925075 128 6 0.409498 125 6 0.6637029 171 6 0.557143 113 6 0.3147868 139 6 0.6279762 62 2 0.306969 132 6 0.367521 59 3 0.563294 48 6 0.4210674 103 2 0.476285 95 4 0.3286118 99 3 0.5656467 75 5 0.656738 62 2 0.55043 79 3 0.476389 62 5 0.835907 46 2 0.35278483 118 6 0.50255 100 5 0.687088 70 6 0.293470 69 4 0.5493575 133 6 0.5356245 85 6 0.544856 118 5 0.142990 126 6 0.000000 84 3 0.00000 145 3 0.200000 30 1 0.08826253 95 3 0.09603175 94 6 0.571886 73 2 0.3789548 72 2 0.6227273 61 1 0.281818 59 1 0.601190 64 2 0.617370 0.350874 0.5197494 0.606900 0.4127575 0.452527 0.627458 0.6145352 0.6586938 0.501553 0.552685 0.466606 0.274360 0.598029 0.283657 0.6760829 0.7150390 0.586047 0.212218 0.306669 0.4654198 0.4942501 0.612928 0.408663 0.5283686 0.4031507 0.478460 0.452680 0.604668 0.4874191 0.52879941 0.5020727 0.0792409 0.000000 0.0334995 0.0564972 0.0629150 0.0112994 0.4829034 0.4436465 0.6330765 0.49994864 0.381053 1 0.4914005 0.5132743 -0.0167517 6 0.4987854 0.5183826 -0.01959723 0.866809 0.394311 insignificant 1 1 insignificant 0.896548 0.225247 insignificant 1 1 insignificant -0.05274041 0.320586 lowCoverage 1 lowCoverage 0.4914005 0.0662021 0.4270346 4 0.4987854 0.088511 0.4102741 5.9657e-21 1.0000e+00 lowCoverage 1.4914e-18 1.0000e+00 lowCoverage 8.1935e-12 1.00000000 lowCoverage 4.0968e-09 1.000000 lowCoverage 0.4052823 1.5612e-07 lowCoverage 0.00005204 lowCoverage 0.4914005 0.4954407 -0.0115382 2 0.4987854 0.3790048 0.1197805 4.1820e-02 0.36056590 lowCoverage 1.0000000 1.00000 lowCoverage 0.1769079 0.65306396 lowCoverage 1.00000 1.00000 lowCoverage 0.0018476 0.98114856 lowCoverage 1.00000 lowCoverage 0.5132743 0.0662021 0.444847 4 0.5183826 0.088511 0.4298714 3.0696e-22 1.0000e+00 lowCoverage 1.5348e-19 1.0000e+00 lowCoverage 1.2138e-10 1.0000e+00 lowCoverage 6.0688e-08 1.00000 lowCoverage 0.4580227 1.9864e-07 lowCoverage 0.00019864 lowCoverage 0.5132743 0.4954407 0.00211816 2 0.5183826 0.3790048 0.1393778 3.9035e-02 0.718740 lowCoverage 1.00000000 1 lowCoverage 0.09663084 0.799370 lowCoverage 1.000000 1 lowCoverage 0.0545880 0.5139392 lowCoverage 1 lowCoverage 0.0662021 0.4954407 -0.44797227 2 0.088511 0.3790048 -0.29049360 0.96490804 8.8256e-10 lowCoverage 1.000000 4.4128e-07 lowCoverage 0.995583 1.4218e-03 lowCoverage 1 2.0311e-01 lowCoverage -0.40343475 0.00194951 lowCoverage 0.389902 lowCoverage chr2 220217821 220218821 29848 SLC4A3 ENSG00000114923 0.882324 350 10 0.753925 308 10 0.8829142 222 10 0.915695 376 10 0.701190 56 6 0.8982951 408 10 0.759850 96 7 0.8947265 294 10 0.8260153 158 9 0.913391 219 10 0.9118401 337 10 0.834259 59 6 0.8575977 314 10 0.7366667 41 2 0.852857 191 10 0.606667 35 3 0.616667 47 3 0.8406203 401 10 0.879546 217 10 0.8990154 349 10 0.8765703 146 10 0.723027 250 10 0.87240 372 10 0.757094 131 10 0.879871 175 10 0.91198734 385 10 0.83951 139 8 0.894635 80 7 0.882578 312 10 0.9139499 453 10 0.8944951 416 10 0.884703 483 10 0.652800 303 10 0.829959 225 10 0.75996 367 8 0.581219 80 7 0.73071429 186 10 0.71891425 333 10 0.747890 332 10 0.8394644 333 10 0.8201194 308 10 0.815494 351 10 0.733711 312 10 0.891099 0.768790 0.8805797 0.924547 0.7746469 0.901361 0.741296 0.8931662 0.8353991 0.918318 0.897654 0.829028 0.857348 0.801354 0.855260 0.6678899 0.5851172 0.842745 0.875439 0.903393 0.8768535 0.7090946 0.886609 0.837264 0.8874825 0.9215970 0.804590 0.869455 0.883176 0.9113799 0.89446210 0.8851516 0.6451300 0.818798 0.7722603 0.5819440 0.7254624 0.7531748 0.7369523 0.8242242 0.8204000 0.83522759 0.751453 5 0.8608754 0.8713643 -0.0034639 10 0.8673167 0.8706388 -0.00332202 0.692285 0.527645 insignificant 1 1 insignificant 0.792307 0.092227 insignificant 1 1 insignificant -0.03769808 0.181694 insignificant 1 insignificant 0.8608754 0.7101740 0.1442402 10 0.8673167 0.717449 0.1498680 1.6111e-17 9.9885e-01 weaklyHypermeth 2.6852e-15 1.0000e+00 weaklyHypermeth 4.7208e-05 0.98212932 weaklyHypermeth 5.2453e-03 1.000000 weaklyHypermeth 0.1109420 2.4624e-02 weaklyHypermeth 0.94706908 insignificant 0.8608754 0.7860636 0.0788520 10 0.8673167 0.7912337 0.0760830 4.8726e-06 0.99966914 weaklyHypermeth 0.0011577 1.00000 weaklyHypermeth 0.0021479 0.99982993 weaklyHypermeth 0.33691 1.00000 insignificant 0.0318673 0.30838202 insignificant 1.00000 insignificant 0.8713643 0.7101740 0.155506 10 0.8706388 0.717449 0.1531900 3.7797e-14 9.9782e-01 weaklyHypermeth 6.2996e-12 1.0000e+00 weaklyHypermeth 1.7572e-05 9.9473e-01 weaklyHypermeth 2.1965e-03 1.00000 weaklyHypermeth 0.1486401 5.9924e-03 weaklyHypermeth 0.35249318 insignificant 0.8713643 0.7860636 0.08294104 10 0.8706388 0.7912337 0.0794050 2.1131e-06 0.992363 weaklyHypermeth 0.00070436 1 weaklyHypermeth 0.00011759 0.998561 weaklyHypermeth 0.052905 1 weaklyHypermeth 0.0695654 0.0299934 weaklyHypermeth 1 insignificant 0.7101740 0.7860636 -0.06813543 10 0.717449 0.7912337 -0.07378500 0.86555578 2.7692e-04 weaklyHypometh 1.000000 1.9780e-02 weaklyHypometh 0.892772 4.9315e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.07907469 0.09061133 insignificant 1.000000 insignificant chr2 222812539 222813539 30311 ENSG00000208070 0.014286 44 5 0.021907 179 5 0.044269 100 5 0.00000 15 1 0.00000 67 5 0.083566 51 5 0.022656 139 5 0.011273 186 5 0.059579 94 5 0.00000 95 5 0.02586 164 5 0.084722 98 5 0.00000 198 5 NA 0 0 0.025484 164 5 0.051323 81 5 0.047926 111 5 0.00000 11 0 0.0090909 159 5 0.00000 75 5 0.14615 41 3 0.00000 5 0 0.033566 73 5 0.00000 26 3 NA 0 0 0.0031746 189 5 0.02000 52 5 0.056667 45 5 0.00000 138 5 0.011816 220 5 0.0068966 176 5 0.17778 62 5 0.064103 107 5 0.262223 90 5 0.00000 60 3 0.00000 5 0 0.028571 24 3 0.82845 102 5 0.00000 40 3 0.041905 45 5 0.10000 8 0 0.000000 21 3 0.00000 11 0 0.02551 0.029247 0.056277 0.00000 0.00000 0.070221 0.038134 0.018104 0.062078 0.00000 0.020353 0.13189 0.00000 NA 0.019748 0.084845 0.042352 0.00000 0.0054113 0.00000 0.14591 0.00000 0.021812 0.00000 NA 0.0056689 0.014286 0.058333 0.00000 0.014227 0.012315 0.18519 0.050061 0.24279 0.061486 0.077651 0.05102 0.82099 0.000000 0.044218 0.13095 0.00000 0.00000 0 0.030034 0.029211 0.0011889 5 0.026870 0.025873 0.00099764 0.269506 0.5912347 insignificant 1 1 insignificant 0.28198 0.392728 insignificant 1 1 insignificant -0.01504133 0.463683 lowCoverage 1 lowCoverage 0.030034 0.28866 -0.258576 5 0.026870 0.28781 -0.260938 1.0000e+00 3.3220e-10 hypomethylated 1.0000e+00 6.6440e-08 hypomethylated 9.9974e-01 2.4700e-03 weaklyHypometh 1.0000e+00 0.30874812 insignificant -0.170807 2.5399e-01 lowCoverage 1.0000e+00 lowCoverage 0.030034 0.02400 0.0073547 3 0.026870 0.020059 0.00681185 2.6956e-01 0.70396378 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.4233e-02 0.9870891 lowCoverage 1.0000e+00 1 lowCoverage -0.0019630 0.9281374 lowCoverage 1.00000 lowCoverage 0.029211 0.28866 -0.25783659 5 0.025873 0.28781 -0.261936 1.0000e+00 2.9113e-06 hypomethylated 1.0000e+00 0.00072781 hypomethylated 9.9636e-01 0.00276988 weaklyHypometh 1.0000e+00 0.48912 insignificant -0.1557656 2.9502e-01 lowCoverage 1.0000e+00 lowCoverage 0.029211 0.02400 0.0056515 3 0.025873 0.020059 0.0058142 6.5000e-01 0.89376787 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.0910e-01 0.9933644 lowCoverage 1.0000e+00 1 lowCoverage 0.0130783 0.6403048 lowCoverage 1 lowCoverage 0.28866 0.02400 0.266246 3 0.28781 0.020059 0.267750 2.6262e-03 9.9994e-01 lowCoverage 0.3751731 1.0000e+00 lowCoverage 0.0075252 9.9992e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.1688439 2.6088e-01 lowCoverage 1.0000e+00 lowCoverage chr2 232935882 232936882 30638 MIR562 ENSG00000207626 0.945411 133 3 0.725893 130 5 0.768845 127 5 0.82602 161 5 0.77690 63 4 0.927532 195 5 0.789082 89 5 0.872916 144 5 0.806744 110 5 0.88176 137 5 0.87493 201 5 0.806999 93 5 0.90571 199 5 0.86111 30 2 0.852691 102 5 0.671861 81 3 0.759903 99 5 0.78676 182 2 0.9048956 128 5 0.91953 161 4 0.87167 48 5 0.82866 101 4 0.888413 119 3 0.83876 83 3 0.92241 55 2 0.8910987 171 5 0.83156 128 5 0.863137 71 3 0.83143 155 5 0.924815 177 5 0.9040741 140 5 0.89170 198 4 0.563193 175 5 0.615278 134 4 0.54167 71 4 0.62125 59 2 0.839597 93 5 0.66493 157 5 0.81577 175 3 0.916776 130 2 0.84767 154 2 0.923701 146 2 0.91733 187 3 0.87880 0.769634 0.817167 0.84472 0.79696 0.923680 0.860680 0.891116 0.852816 0.87982 0.842187 0.84189 0.87121 0.88469 0.827052 0.693842 0.814143 0.75716 0.8628979 0.92297 0.94192 0.81156 0.893102 0.91612 0.82850 0.8835332 0.812465 0.879597 0.75233 0.865708 0.897706 0.87494 0.551339 0.48296 0.580803 0.484768 0.81910 0.64985 0.880750 0.909891 0.78791 0.89846 0.89186 2 0.853411 0.874136 -0.0178792 5 0.859259 0.879763 -0.02050432 0.727334 0.1884641 insignificant 1 1 insignificant 0.94985 0.080353 insignificant 1 1 insignificant -0.04070263 0.043538 lowCoverage 1 lowCoverage 0.853411 0.65312 0.213986 5 0.859259 0.64546 0.213801 1.6243e-12 9.9997e-01 hypermethylated 1.6243e-10 1.0000e+00 hypermethylated 5.6270e-05 9.8949e-01 hypermethylated 4.0193e-03 1.00000000 hypermethylated 0.192289 5.2090e-03 lowCoverage 3.2556e-01 lowCoverage 0.853411 0.88510 -0.0255894 2 0.859259 0.900418 -0.04115899 1.5684e-01 0.02293965 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.9990e-01 0.0080099 lowCoverage 1.0000e+00 1 lowCoverage -0.0509758 0.0963957 lowCoverage 1.00000 lowCoverage 0.874136 0.65312 0.23472972 5 0.879763 0.64546 0.234305 6.1523e-10 1.0000e+00 hypermethylated 5.1269e-08 1.00000000 hypermethylated 1.2774e-04 0.99897389 hypermethylated 1.1208e-02 1.00000 hypermethylated 0.2329920 2.5309e-03 lowCoverage 2.5309e-01 lowCoverage 0.874136 0.88510 -0.0149693 2 0.879763 0.900418 -0.0206547 4.8534e-01 0.03087991 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.5081e-01 0.0470576 lowCoverage 1.0000e+00 1 lowCoverage -0.0102732 0.6876994 lowCoverage 1 lowCoverage 0.65312 0.88510 -0.269576 2 0.64546 0.900418 -0.254960 9.9998e-01 4.0996e-05 lowCoverage 1.0000000 3.1535e-03 lowCoverage 0.9999160 1.0004e-03 lowCoverage 1 1.0004e-01 lowCoverage -0.2432652 1.4200e-03 lowCoverage 1.7295e-01 lowCoverage chr2 232988544 232989544 30640 ALPPL2 ENSG00000163286 0.931916 272 7 0.795378 170 8 0.876966 140 7 0.92223 231 7 0.85298 64 4 0.937230 381 8 0.865175 136 8 0.960040 191 7 0.939679 137 7 0.97109 108 7 0.95809 242 7 0.916667 36 2 0.85887 137 7 0.93770 61 6 0.927160 108 7 0.964286 16 1 0.875000 14 1 0.93961 255 7 0.8874032 177 7 0.96503 293 7 0.82500 68 6 0.83694 64 4 0.931157 212 7 0.98750 69 5 0.96486 185 4 0.9246358 186 8 0.85572 140 6 0.926926 82 4 0.96530 216 7 0.902194 203 7 0.8614898 223 7 0.93160 330 7 0.749738 157 7 0.538889 207 7 0.79630 73 2 0.88893 132 6 0.747519 135 7 0.75832 269 7 0.91556 219 7 0.948874 237 7 0.95510 164 7 0.970872 177 5 0.94357 232 7 0.92056 0.823879 0.848729 0.94903 0.76910 0.911622 0.896790 0.939186 0.895959 0.95861 0.935052 0.87973 0.94040 0.88722 0.925336 0.888071 0.879148 0.88910 0.8701711 0.96103 0.94953 0.80939 0.922088 0.98969 0.92406 0.9736807 0.885307 0.917129 0.93356 0.943188 0.974763 0.89511 0.682047 0.54207 0.833192 0.861165 0.73739 0.69020 0.914709 0.913240 0.94952 0.93868 0.92564 2 0.914800 0.933771 -0.0204509 7 0.819662 0.879607 -0.05994517 0.776070 0.0420700 weaklyHypometh 1 1 insignificant 0.47428 0.134430 insignificant 1 1 insignificant 0.00468184 0.804588 insignificant 1 insignificant 0.915088 0.73176 0.174983 7 0.922119 0.69671 0.225408 8.6854e-16 1.0000e+00 weaklyHypermeth 1.7371e-13 1.0000e+00 weaklyHypermeth 6.2606e-07 9.9849e-01 weaklyHypermeth 1.2521e-04 1.00000000 weaklyHypermeth 0.167510 1.4998e-02 weaklyHypermeth 6.8173e-01 insignificant 0.914800 0.92906 -0.0172861 7 0.819662 0.951147 -0.13148591 9.9000e-01 0.28800061 insignificant 1.0000e+00 1.00000 insignificant 9.4260e-01 0.5335882 insignificant 1.0000e+00 1 insignificant -0.0326683 0.0318909 weaklyHypometh 1.00000 insignificant 0.934650 0.73176 0.20722060 7 0.927058 0.69671 0.230346 7.1378e-15 1.0000e+00 hypermethylated 1.4276e-12 1.00000000 hypermethylated 5.8861e-07 0.99982533 hypermethylated 1.9229e-04 1.00000 hypermethylated 0.1628281 1.6043e-02 weaklyHypermeth 6.6845e-01 insignificant 0.933771 0.92906 0.0042840 7 0.879607 0.951147 -0.0715407 6.1955e-01 0.53531289 insignificant 1.0000e+00 1.00000 insignificant 7.7200e-01 0.5849911 insignificant 1.0000e+00 1 insignificant -0.0373501 0.0542506 insignificant 1 insignificant 0.73176 0.92899 -0.192806 7 0.69671 0.945041 -0.248330 1.0000e+00 8.7195e-08 weaklyHypometh 1.0000000 2.1799e-05 weaklyHypometh 0.9999177 3.5039e-05 weaklyHypometh 1 7.6898e-03 weaklyHypometh -0.2001782 7.3378e-03 weaklyHypometh 4.2217e-01 insignificant chr2 233078526 233079526 30647 ECEL1 ENSG00000171551 0.297130 306 6 0.330505 353 6 0.541586 329 6 0.52496 289 5 0.58213 170 6 0.636984 422 6 0.431558 256 6 0.412879 315 6 0.413374 388 6 0.70101 359 5 0.52541 282 7 0.517290 201 5 0.23287 336 5 0.32314 106 4 0.243718 330 6 0.490867 184 5 0.467097 258 5 0.35040 321 5 0.3403036 212 5 0.20695 364 6 0.41626 138 6 0.29421 226 5 0.449468 285 6 0.49455 161 7 0.41432 178 6 0.3492000 419 6 0.40995 243 6 0.513837 167 6 0.40611 289 5 0.192036 500 7 0.2270276 453 6 0.54311 345 6 0.188371 367 7 0.184190 225 5 0.19494 246 4 0.06864 126 7 0.424036 169 6 0.17429 380 6 0.30889 406 5 0.328543 360 5 0.10441 274 5 0.089606 365 5 0.10134 374 5 0.33280 0.449437 0.467845 0.31663 0.47814 0.490089 0.496912 0.425418 0.412319 0.46748 0.595421 0.52975 0.22578 0.37864 0.260592 0.427230 0.249612 0.30436 0.4402394 0.25044 0.52165 0.12539 0.454394 0.47854 0.37786 0.3405553 0.402951 0.560017 0.46256 0.227420 0.311158 0.63444 0.166531 0.26864 0.115303 0.059200 0.32429 0.20132 0.090764 0.179192 0.10857 0.10421 0.17004 5 0.381422 0.372832 0.0057615 6 0.500304 0.358878 0.14142625 0.191029 0.8975697 insignificant 1 1 insignificant 0.33181 0.898771 insignificant 1 1 insignificant 0.03600174 0.421317 insignificant 1 insignificant 0.381109 0.18531 0.195925 6 0.437881 0.19722 0.240657 6.4557e-10 1.0000e+00 weaklyHypermeth 3.5865e-08 1.0000e+00 weaklyHypermeth 9.4534e-08 1.0000e+00 weaklyHypermeth 3.1511e-05 1.00000000 weaklyHypermeth 0.222763 3.0931e-03 weaklyHypermeth 2.5825e-01 insignificant 0.381126 0.11917 0.2547534 5 0.425381 0.243702 0.18167867 4.2754e-15 0.99461622 hypermethylated 4.2754e-12 1.00000 hypermethylated 5.2276e-11 0.9999358 hypermethylated 5.2276e-08 1 hypermethylated 0.2419503 0.0062430 weaklyHypermeth 0.89185 insignificant 0.372717 0.18506 0.18967730 6 0.315420 0.17531 0.140111 5.9349e-06 1.0000e+00 weaklyHypermeth 2.4729e-04 1.00000000 weaklyHypermeth 6.5605e-05 0.99999702 weaklyHypermeth 7.2894e-03 1.00000 weaklyHypermeth 0.1867610 9.0981e-03 weaklyHypermeth 5.0545e-01 insignificant 0.374298 0.11917 0.2464616 5 0.386098 0.243702 0.1423959 5.9942e-09 0.99211587 hypermethylated 2.9971e-06 1.00000 hypermethylated 1.7233e-09 0.9995056 hypermethylated 1.7233e-06 1 hypermethylated 0.2059485 0.0136237 weaklyHypermeth 1 insignificant 0.18605 0.11887 0.061604 5 0.22540 0.242802 -0.017404 1.6645e-02 3.9517e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0753695 8.1193e-01 insignificant 1 1.0000e+00 insignificant 0.0191875 7.9658e-01 insignificant 1.0000e+00 insignificant chr2 234369129 234370129 30662 HEATR7B1 ENSG00000185038 0.913478 153 5 0.805831 137 5 0.800438 84 5 0.96566 104 3 0.72963 62 5 0.752111 169 4 0.956667 54 4 0.850415 197 5 0.711111 84 5 0.92231 110 5 0.75506 143 5 0.777778 33 4 0.76900 145 5 0.91667 50 3 0.921190 109 5 0.725578 35 3 0.783333 30 3 0.68420 138 3 0.7352696 159 5 0.86766 152 5 0.64874 90 4 0.87617 67 3 0.748429 93 5 0.79167 62 4 0.71497 47 3 0.9188277 156 5 0.59389 157 5 0.704082 67 5 0.69715 121 5 0.901557 163 5 0.9303029 114 5 0.93351 157 5 0.649690 139 5 0.627817 102 5 0.80000 180 5 0.56190 22 2 0.630288 110 5 0.66553 140 5 0.94966 129 4 0.933163 128 5 0.93757 97 3 0.846651 104 4 0.88421 96 4 0.89337 0.762826 0.725161 0.94909 0.86490 0.867503 0.919886 0.868308 0.829924 0.92635 0.905680 0.68624 0.92057 0.92028 0.892898 0.781217 0.952165 0.86177 0.8876997 0.92161 0.84363 0.86140 0.902386 0.97727 0.90527 0.8897904 0.836810 0.974838 0.90388 0.891983 0.925011 0.91845 0.584618 0.53222 0.647727 0.571429 0.53302 0.58574 0.914124 0.935114 0.91802 0.80092 0.90736 2 0.869181 0.889490 -0.0247379 5 0.730729 0.655706 0.07502358 0.693831 0.2814297 insignificant 1 1 insignificant 0.71543 0.414402 insignificant 1 1 insignificant 0.02889501 0.479055 lowCoverage 1 lowCoverage 0.869525 0.63492 0.239064 5 0.769184 0.65166 0.117523 6.5545e-09 9.8704e-01 hypermethylated 3.1212e-07 1.0000e+00 hypermethylated 1.3122e-03 9.8701e-01 weaklyHypermeth 5.7052e-02 1.00000000 weaklyHypermeth 0.161298 2.0198e-03 lowCoverage 2.2442e-01 lowCoverage 0.869525 0.89892 -0.0247878 4 0.769184 0.926530 -0.15734620 9.8862e-01 0.07102983 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9249e-01 0.1412111 lowCoverage 1.0000e+00 1 lowCoverage -0.0930825 0.0049745 lowCoverage 0.82909 lowCoverage 0.891557 0.63492 0.26952141 5 0.764990 0.65166 0.113329 2.8980e-07 9.3143e-01 hypermethylated 1.4490e-05 1.00000000 hypermethylated 1.6653e-03 0.93784872 weaklyHypermeth 7.5696e-02 1.00000 weaklyHypermeth 0.1324031 1.3903e-02 lowCoverage 6.0447e-01 lowCoverage 0.891557 0.89892 0.0010425 4 0.764990 0.926530 -0.1615404 8.4446e-01 0.06896780 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.8843e-01 0.2036725 lowCoverage 1.0000e+00 1 lowCoverage -0.1219775 0.0077985 lowCoverage 1 lowCoverage 0.63492 0.89892 -0.293743 4 0.65166 0.926530 -0.274869 9.9997e-01 1.1590e-03 lowCoverage 1.0000000 6.1002e-02 lowCoverage 0.9999802 1.3742e-02 lowCoverage 1 5.9376e-01 lowCoverage -0.2543805 1.4576e-04 lowCoverage 3.6441e-02 lowCoverage chr2 236334472 236335472 30679 AGAP1 ENSG00000157985 0.834565 258 7 0.817336 199 7 0.679882 110 6 0.83496 191 6 0.82474 65 6 0.830295 358 7 0.825574 86 6 0.781378 136 6 0.849854 86 6 0.71417 100 6 0.81398 242 7 0.771678 50 4 0.79203 184 6 0.88889 27 3 0.759450 107 6 0.875556 30 4 0.778182 57 4 0.81804 190 4 0.7381181 178 7 0.76772 337 7 0.77031 90 6 0.85056 109 4 0.745635 149 6 0.80059 126 6 0.74550 61 4 0.8006605 223 6 0.76479 152 6 0.726515 71 5 0.77110 120 6 0.788616 237 7 0.7744900 253 7 0.81366 367 7 0.704110 160 6 0.685236 118 6 0.72022 342 6 0.68016 55 4 0.813644 140 7 0.77888 214 7 0.82721 231 6 0.860649 219 6 0.74638 159 4 0.880935 204 4 0.74093 217 4 0.82906 0.733695 0.709168 0.76764 0.83756 0.704807 0.723860 0.672407 0.791479 0.76089 0.794170 0.81949 0.79682 0.79355 0.735697 0.818393 0.692808 0.77155 0.7357942 0.72020 0.71317 0.75025 0.743630 0.81449 0.78803 0.7755331 0.655642 0.763880 0.71990 0.770899 0.671744 0.69664 0.720195 0.73490 0.777505 0.560376 0.72064 0.70366 0.789730 0.794987 0.75700 0.80950 0.79475 4 0.788699 0.761491 0.0129627 6 0.812256 0.778516 0.03374006 0.050963 0.6839151 insignificant 1 1 insignificant 0.26959 0.409783 insignificant 1 1 insignificant 0.02045251 0.189305 insignificant 1 insignificant 0.788699 0.76190 0.017513 6 0.812256 0.75791 0.054350 2.6066e-02 9.7932e-01 weaklyHypermeth 6.3600e-01 1.0000e+00 insignificant 5.6100e-02 9.9782e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.069446 2.3878e-02 weaklyHypermeth 8.5277e-01 insignificant 0.788699 0.85825 -0.0426297 6 0.812256 0.795845 0.01641034 8.2520e-01 0.00041159 weaklyHypometh 1.0000e+00 0.20580 insignificant 7.2241e-01 0.0029582 weaklyHypometh 1.0000e+00 1 insignificant -0.0114010 0.7283881 lowCoverage 1.00000 lowCoverage 0.761491 0.76190 -0.00038778 6 0.778516 0.75791 0.020610 3.7838e-01 8.3756e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.9352e-01 0.99640759 insignificant 1.0000e+00 1.00000 insignificant 0.0489940 8.2024e-02 insignificant 1.0000e+00 insignificant 0.761491 0.85825 -0.0619277 6 0.778516 0.795845 -0.0173297 9.5808e-01 0.00040695 weaklyHypometh 1.0000e+00 0.40695 insignificant 9.4643e-01 0.0014283 weaklyHypometh 1.0000e+00 1 insignificant -0.0318536 0.3448652 lowCoverage 1 lowCoverage 0.76190 0.85825 -0.056998 6 0.75791 0.795845 -0.037940 9.7359e-01 2.2274e-03 weaklyHypometh 1.0000000 9.2809e-02 weaklyHypometh 0.9771928 1.4844e-02 weaklyHypometh 1 5.9376e-01 insignificant -0.0808475 5.7422e-02 lowCoverage 1.0000e+00 lowCoverage chr2 236383921 236384921 30687 ENSG00000222007 0.911345 178 7 0.733486 371 9 0.928788 76 8 0.87390 111 7 0.82786 68 8 0.811928 402 8 0.874074 61 6 0.747934 116 9 0.617316 49 7 1.00000 45 4 0.83715 373 9 0.500000 8 0 0.77211 89 7 0.68519 68 7 0.876623 72 7 NA 0 0 NA 0 0 0.66114 108 7 0.8923457 116 7 0.88312 302 7 0.89210 79 9 1.00000 2 0 0.912907 139 7 0.90806 133 7 NA 0 0 0.9155943 425 9 0.74514 127 9 0.982143 32 3 0.85185 72 7 0.831719 367 9 0.7537695 412 9 0.93807 471 7 0.894351 272 9 0.806184 149 7 0.79215 417 9 1.00000 20 4 0.938117 154 8 0.90494 443 9 0.52761 427 8 0.869788 456 9 0.93122 170 8 1.000000 30 3 0.80469 294 9 0.93332 0.752135 0.915341 0.84947 1.00000 0.832958 0.728125 0.735577 0.537879 1.00000 0.881833 0.50000 0.91949 0.88542 0.842938 NA NA 0.65223 0.9444444 0.94818 0.91477 NA 0.985119 0.95000 NA 0.9162380 0.826103 1.000000 0.82500 0.905856 0.837108 0.92211 0.990809 0.98798 0.997533 1.000000 0.94717 0.95618 0.642249 0.964677 0.95776 1.00000 0.86116 0 0.836969 0.872510 -0.0363438 7 0.813998 0.857575 -0.04357759 0.994588 0.0094151 weaklyHypometh 1 1 insignificant 0.98329 0.027028 weaklyHypometh 1 1 insignificant -0.08276245 0.041647 weaklyHypometh 1 insignificant 0.836969 0.92990 -0.092012 7 0.813998 0.86996 -0.055962 5.2416e-01 2.3016e-08 weaklyHypometh 1.0000e+00 3.8360e-06 weaklyHypometh 9.1363e-01 2.0780e-06 weaklyHypometh 1.0000e+00 0.00069266 weaklyHypometh -0.087383 6.5667e-02 insignificant 1.0000e+00 insignificant 0.836969 0.78577 0.0463944 7 0.813998 0.776532 0.03746536 1.1322e-02 0.91096483 weaklyHypermeth 7.5481e-01 1.00000 insignificant 7.4815e-01 0.6059249 insignificant 1.0000e+00 1 insignificant -0.0247554 0.7863896 insignificant 1.00000 insignificant 0.872510 0.92990 -0.05064771 9 0.857575 0.86996 -0.012385 1.8383e-01 2.3056e-06 weaklyHypometh 1.0000e+00 0.00072781 weaklyHypometh 7.9271e-01 0.00035849 weaklyHypometh 1.0000e+00 0.11950 insignificant -0.0046209 9.1189e-01 insignificant 1.0000e+00 insignificant 0.872510 0.78577 0.0814060 8 0.857575 0.776532 0.0810430 1.5333e-03 0.99899743 weaklyHypermeth 1.0952e-01 1.00000 insignificant 3.9110e-01 0.9717536 insignificant 1.0000e+00 1 insignificant 0.0580070 0.5276546 insignificant 1 insignificant 0.92990 0.78577 0.134426 8 0.86996 0.776532 0.093428 1.0491e-05 9.8033e-01 weaklyHypermeth 0.0017486 1.0000e+00 weaklyHypermeth 0.0082095 9.9554e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0626279 5.0533e-01 insignificant 1.0000e+00 insignificant chr2 237961196 237962196 30735 COPS8 ENSG00000198612 0.820120 197 6 0.927390 323 9 0.903940 175 9 0.98611 151 9 0.94724 116 9 0.902193 281 9 0.954550 208 9 0.865974 175 9 0.956423 102 4 0.86883 97 4 0.93351 261 9 0.857303 121 4 0.96609 95 4 0.98618 49 1 0.970742 165 4 0.936459 111 7 0.792614 54 4 0.85853 86 4 0.8483947 182 6 0.92651 198 9 0.94321 96 8 0.88258 31 1 0.865327 177 6 0.92251 88 6 0.97497 169 7 0.9507081 247 9 0.85959 94 8 0.798810 69 4 0.92470 182 9 0.987191 298 9 0.9846594 287 9 0.98177 274 9 0.947200 224 9 0.962689 155 9 1.00000 220 7 0.94571 134 8 0.839603 151 9 0.97938 278 9 0.91554 281 9 0.917679 250 9 0.96176 163 9 0.987291 214 6 0.91452 142 7 0.88178 0.903471 0.887418 0.99952 0.92749 0.928529 0.955404 0.923499 0.897346 0.96259 0.920996 0.92866 0.93942 0.92398 0.976786 0.982128 0.917757 0.91492 0.9081588 0.94598 0.87650 0.88994 0.951962 0.91440 0.98277 0.9462293 0.790447 0.913828 0.90681 0.964316 0.974594 0.93939 0.926285 0.92583 0.988637 0.998121 0.94321 0.98983 0.948103 0.936157 0.92448 0.99120 0.91891 2 0.926597 0.946819 -0.0154757 9 0.894527 0.873638 0.02088831 0.996818 0.0173315 weaklyHypometh 1 1 insignificant 0.89481 0.139124 insignificant 1 1 insignificant -0.01254596 0.564445 insignificant 1 insignificant 0.926597 0.96213 -0.032877 9 0.894527 0.91975 -0.025225 9.9313e-01 2.6697e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8716e-01 7.6127e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.035308 2.1149e-01 insignificant 1.0000e+00 insignificant 0.927116 0.94000 -0.0140156 9 0.926644 0.933979 -0.00733493 6.9448e-01 0.53654070 insignificant 1.0000e+00 1.00000 insignificant 6.5712e-01 0.7021389 insignificant 1.0000e+00 1 insignificant -0.0289021 0.1682834 insignificant 1.00000 insignificant 0.946819 0.96213 -0.01544933 9 0.873638 0.91975 -0.046113 9.3824e-01 5.4907e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9142e-01 0.50393157 insignificant 1.0000e+00 1.00000 insignificant -0.0227624 4.4419e-01 insignificant 1.0000e+00 insignificant 0.947709 0.94000 0.0058704 9 0.956669 0.933979 0.0226905 1.3158e-02 0.96924875 weaklyHypermeth 6.9254e-01 1.00000 insignificant 1.5350e-01 0.9515906 insignificant 1.0000e+00 1 insignificant -0.0163562 0.4869230 insignificant 1 insignificant 0.96290 0.94000 0.020507 9 0.95747 0.933979 0.023496 2.3560e-02 9.7900e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.1358865 9.9441e-01 insignificant 1 1.0000e+00 insignificant 0.0064062 8.1997e-01 insignificant 1.0000e+00 insignificant chr2 239930691 239931691 30743 ENSG00000213828 0.937075 421 12 0.774868 326 12 0.943577 263 9 0.96025 401 11 0.94604 182 10 0.930262 476 12 0.944210 354 12 0.913343 238 11 0.921204 275 12 0.92992 229 11 0.94945 375 12 0.915469 195 9 0.93873 267 12 0.96875 108 8 0.940938 308 12 0.892401 186 8 0.893225 155 9 0.88979 386 8 0.9550090 292 11 0.92805 449 12 0.96288 106 9 0.94114 127 9 0.877983 214 12 0.93453 177 12 0.95198 86 8 0.9298666 369 12 0.90449 150 11 0.873384 115 11 0.90908 291 11 0.958682 412 12 0.9072943 403 12 0.93734 533 12 0.950562 310 12 0.972403 155 10 0.99359 95 6 0.97292 46 5 0.962242 249 12 0.84693 437 11 0.90956 442 12 0.974102 383 12 0.97206 312 5 0.924484 417 12 0.85102 337 9 0.91421 0.773663 0.922021 0.93896 0.91818 0.909913 0.932823 0.903008 0.902750 0.88367 0.957541 0.90883 0.92912 0.94422 0.928371 0.862531 0.858124 0.86605 0.9530019 0.92411 0.93339 0.88564 0.877662 0.89389 0.93829 0.9204886 0.900206 0.841835 0.87173 0.953046 0.890780 0.92011 0.958313 0.95235 0.964817 0.944767 0.94749 0.93033 0.901218 0.963870 0.95313 0.90965 0.80725 6 0.913694 0.913175 0.0068160 12 0.873738 0.932844 -0.05910595 0.439541 0.9196823 insignificant 1 1 insignificant 0.75796 0.743945 insignificant 1 1 insignificant -0.00042639 0.973247 insignificant 1 insignificant 0.913834 0.93266 -0.014769 12 0.931237 0.86770 0.063540 8.6147e-01 8.8949e-03 weaklyHypometh 1.0000e+00 8.0862e-01 insignificant 9.9995e-01 1.3577e-03 weaklyHypometh 1.0000e+00 0.19395924 insignificant -0.026146 2.9862e-01 insignificant 1.0000e+00 insignificant 0.913819 0.90799 -0.0036174 11 0.925506 0.925155 0.00035133 6.0421e-01 0.56092011 insignificant 1.0000e+00 1.00000 insignificant 8.3356e-01 0.3922906 insignificant 1.0000e+00 1 insignificant -0.0026166 0.9189224 insignificant 1.00000 insignificant 0.913000 0.93266 -0.02196690 12 0.922513 0.86770 0.054817 9.7787e-01 8.7050e-03 weaklyHypometh 1.0000e+00 0.87050231 insignificant 9.9979e-01 0.01381355 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0257197 3.0260e-01 insignificant 1.0000e+00 insignificant 0.912912 0.90799 -0.0071802 11 0.916055 0.925155 -0.0090996 7.8704e-01 0.35904911 insignificant 1.0000e+00 1.00000 insignificant 9.0870e-01 0.3953477 insignificant 1.0000e+00 1 insignificant -0.0021902 0.9315257 insignificant 1 insignificant 0.93338 0.90799 0.013238 11 0.94000 0.925155 0.014849 2.5685e-02 9.1157e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0700125 9.9691e-01 insignificant 1 1.0000e+00 insignificant 0.0235295 4.7053e-01 insignificant 1.0000e+00 insignificant chr2 240049769 240050769 30750 ENSG00000222020 0.957654 470 10 0.788350 480 10 0.792243 272 10 0.86144 348 10 0.85077 137 10 0.927342 476 10 0.911510 149 8 0.900079 262 10 0.712079 208 9 0.81987 220 10 0.86226 375 10 0.824906 95 8 0.88812 292 10 0.84756 119 6 0.823328 250 10 0.842593 98 5 0.857143 16 0 0.77250 433 10 0.8038698 441 9 0.90660 384 10 0.70364 108 7 0.76349 157 8 0.764229 312 10 0.81181 161 10 0.91669 144 10 0.8331466 471 10 0.89296 300 10 0.750959 107 7 0.84948 499 9 0.916831 497 10 0.8836588 415 10 0.92757 397 10 0.102990 443 10 0.067593 267 10 0.19896 390 9 0.25506 94 4 0.143606 330 9 0.18282 700 10 0.86414 426 10 0.796499 417 10 0.89298 373 10 0.909359 350 10 0.85894 368 10 0.94395 0.749457 0.743787 0.85836 0.90264 0.905694 0.883875 0.863822 0.847108 0.89451 0.929983 0.83160 0.89072 0.87115 0.899530 0.935094 0.822824 0.78683 0.8872812 0.91008 0.75996 0.80528 0.930968 0.97251 0.92256 0.9227676 0.881719 0.922976 0.85004 0.898478 0.888830 0.91504 0.134899 0.10051 0.128410 0.383355 0.15229 0.17868 0.831622 0.837610 0.89422 0.90816 0.83033 7 0.878645 0.900224 -0.0214189 10 0.794000 0.788243 0.00575738 0.905533 0.0868074 insignificant 1 1 insignificant 0.89279 0.243251 insignificant 1 1 insignificant 0.01297137 0.616268 insignificant 1 insignificant 0.878645 0.13399 0.744537 10 0.794000 0.15527 0.638731 6.0489e-121 1.0000e+00 hypermethylated 6.0489e-118 1.0000e+00 hypermethylated 3.1173e-22 1.0000e+00 hypermethylated 3.1173e-19 1.00000000 hypermethylated 0.689005 4.5972e-08 hypermethylated 2.2986e-05 hypermethylated 0.878645 0.87590 0.0077136 10 0.794000 0.813508 -0.01950786 4.9952e-01 0.62099548 insignificant 1.0000e+00 1.00000 insignificant 4.8268e-01 0.6287027 insignificant 1.0000e+00 1 insignificant -0.0168737 0.4903277 insignificant 1.00000 insignificant 0.900224 0.13399 0.77459991 10 0.788243 0.15527 0.632974 1.2086e-98 1.0000e+00 hypermethylated 1.2086e-95 1.00000000 hypermethylated 3.5249e-18 0.99999965 hypermethylated 3.5249e-15 1.00000 hypermethylated 0.6760332 6.9780e-10 hypermethylated 6.9780e-07 hypermethylated 0.900224 0.87590 0.0316763 10 0.788243 0.813508 -0.0252652 8.9471e-03 0.79305923 weaklyHypermeth 5.2630e-01 1.00000 insignificant 8.4516e-02 0.7484869 insignificant 1.0000e+00 1 insignificant -0.0298451 0.3246785 insignificant 1 insignificant 0.13399 0.87590 -0.742329 10 0.15527 0.813508 -0.658239 1.0000e+00 2.0325e-61 hypomethylated 1.0000000 2.0325e-58 hypomethylated 1.0000000 3.1439e-12 hypomethylated 1 3.1439e-09 hypomethylated -0.7058783 1.2969e-08 hypomethylated 1.2969e-05 hypomethylated chr2 240696875 240697875 30758 OR5S1P ENSG00000213048 0.916073 421 6 0.896782 339 6 0.920885 167 6 0.93038 292 6 0.84231 123 6 0.814772 617 7 0.870206 194 7 0.909111 217 5 0.714926 146 5 0.96867 125 5 0.89362 314 7 0.815350 105 2 0.95152 217 5 0.94622 133 4 0.892143 154 4 0.914524 99 2 0.500000 5 0 0.73758 554 6 0.9364183 435 5 0.92379 543 6 0.91531 82 5 0.89186 76 4 0.830814 253 6 0.76020 84 6 0.74134 62 6 0.9202466 391 7 0.59635 281 6 0.807592 86 4 0.92263 390 5 0.953152 386 6 0.9520118 396 6 0.94814 416 6 0.697224 236 7 0.636637 363 6 0.56205 252 5 0.96143 51 4 0.702579 272 7 0.49972 459 7 0.90015 453 7 0.924968 486 6 0.83162 452 7 0.944842 683 5 0.78817 351 7 0.86853 0.869811 0.913952 0.92412 0.90692 0.915412 0.859755 0.886372 0.856988 0.92709 0.912833 0.84767 0.91956 0.91329 0.919566 0.825512 0.779730 0.75766 0.9230892 0.89662 0.88704 0.83069 0.854174 0.79466 0.72381 0.9391221 0.932121 0.931955 0.88360 0.957568 0.952428 0.92735 0.558309 0.54440 0.410278 0.926181 0.60040 0.42893 0.861921 0.921778 0.91094 0.86901 0.78074 3 0.890385 0.917558 -0.0264234 6 0.886781 0.822618 0.06416236 0.996763 0.1304888 insignificant 1 1 insignificant 0.88404 0.672735 insignificant 1 1 insignificant 0.01145935 0.777611 insignificant 1 insignificant 0.890580 0.54228 0.360266 6 0.890147 0.61634 0.273803 2.9852e-24 1.0000e+00 hypermethylated 9.9506e-22 1.0000e+00 hypermethylated 4.5710e-06 9.9993e-01 hypermethylated 5.0789e-04 1.00000000 hypermethylated 0.188158 3.3278e-02 weaklyHypermeth 1.0000e+00 insignificant 0.890364 0.87010 0.0136337 6 0.872628 0.799911 0.07271733 4.1614e-01 0.86661533 insignificant 1.0000e+00 1.00000 insignificant 5.2764e-01 0.8654638 insignificant 1.0000e+00 1 insignificant -0.0131852 0.7376934 insignificant 1.00000 insignificant 0.917501 0.54256 0.37138050 6 0.800446 0.66430 0.136145 1.4097e-17 1.0000e+00 hypermethylated 4.6989e-15 1.00000000 hypermethylated 1.7732e-04 0.99982344 hypermethylated 1.2666e-02 1.00000 hypermethylated 0.1766988 4.3307e-02 weaklyHypermeth 1.0000e+00 insignificant 0.917874 0.87010 0.0370305 6 0.925446 0.799911 0.1255347 1.0575e-01 0.98832814 insignificant 1.0000e+00 1.00000 insignificant 4.5186e-01 0.9589541 insignificant 1.0000e+00 1 insignificant -0.0246445 0.5796094 insignificant 1 insignificant 0.54228 0.87113 -0.341098 7 0.61634 0.878470 -0.262126 9.9996e-01 3.3101e-08 hypomethylated 1.0000000 1.1034e-05 hypomethylated 0.9999937 2.9684e-04 hypomethylated 1 3.7105e-02 hypomethylated -0.2013433 2.6700e-02 weaklyHypometh 1.0000e+00 insignificant chr2 240884094 240885094 30761 ENSG00000212449 0.894884 316 8 0.821497 194 9 0.726804 150 9 0.84948 335 8 0.88847 139 10 0.878282 287 8 0.805874 211 10 0.750184 219 10 0.712975 238 8 0.88093 219 8 0.85822 256 10 0.845218 163 8 0.72699 337 9 0.86162 144 9 0.853746 222 8 0.822751 44 5 0.658868 68 6 0.85816 315 8 0.6903138 157 7 0.66715 249 8 0.66149 110 9 0.73270 173 8 0.794859 174 8 0.70703 175 9 0.86541 127 8 0.8428138 260 9 0.69072 224 9 0.737167 104 9 0.78972 159 8 0.817565 297 9 0.7766307 220 9 0.85049 334 8 0.721862 253 9 0.552646 115 8 0.43333 70 4 0.71740 108 7 0.670531 143 9 0.72146 259 9 0.54433 365 8 0.675821 227 8 0.56691 188 8 0.765132 244 8 0.83056 406 8 0.88676 0.850687 0.785302 0.83138 0.87895 0.836486 0.826745 0.755717 0.747343 0.83548 0.850635 0.82454 0.69378 0.81344 0.875163 0.829694 0.710502 0.84555 0.7832973 0.66738 0.79093 0.67909 0.790171 0.77939 0.82238 0.8305191 0.742110 0.837822 0.79264 0.814352 0.771616 0.90035 0.765548 0.56848 0.394619 0.667169 0.81983 0.76937 0.592227 0.592720 0.57374 0.74696 0.80612 7 0.810183 0.813617 0.0058653 9 0.810134 0.815335 -0.00520159 0.510342 0.2496280 insignificant 1 1 insignificant 0.09970 0.623570 insignificant 1 1 insignificant 0.03040459 0.254260 insignificant 1 insignificant 0.810183 0.68254 0.125082 9 0.810134 0.68725 0.122887 6.5019e-09 9.7160e-01 weaklyHypermeth 3.1212e-07 1.0000e+00 weaklyHypermeth 5.0092e-03 7.3815e-01 weaklyHypermeth 1.6697e-01 1.00000000 insignificant 0.166415 1.6516e-02 weaklyHypermeth 7.1109e-01 insignificant 0.809796 0.67133 0.1254237 8 0.806895 0.675366 0.13152805 5.0521e-08 0.99999980 weaklyHypermeth 1.2630e-05 1.00000 weaklyHypermeth 5.7134e-05 0.9991124 weaklyHypermeth 1.9045e-02 1 weaklyHypermeth 0.1260690 0.0835250 insignificant 1.00000 insignificant 0.812049 0.68038 0.12051474 9 0.728057 0.57271 0.155351 4.9829e-08 9.9203e-01 weaklyHypermeth 2.7683e-06 1.00000000 weaklyHypermeth 8.5518e-03 0.90482071 weaklyHypermeth 2.7586e-01 1.00000 insignificant 0.1360101 3.6789e-02 weaklyHypermeth 1.0000e+00 insignificant 0.812420 0.67133 0.1109438 8 0.794817 0.675366 0.1194505 2.5016e-05 0.99999757 weaklyHypermeth 2.7796e-03 1.00000 weaklyHypermeth 8.2012e-04 0.9992395 weaklyHypermeth 1.5385e-01 1 insignificant 0.0956644 0.1629333 insignificant 1 insignificant 0.67918 0.67133 -0.012686 8 0.66104 0.675366 -0.014323 3.7876e-01 2.0590e-02 weaklyHypometh 1.0000000 6.2028e-01 insignificant 0.3265188 2.3078e-01 insignificant 1 1.0000e+00 insignificant -0.0403457 5.9724e-01 insignificant 1.0000e+00 insignificant chr2 241522564 241523564 30763 C2orf54 ENSG00000172478 0.933615 101 5 0.711111 44 3 0.845193 164 5 0.78307 84 5 0.63629 91 5 0.938485 180 5 0.646548 113 5 0.564995 123 5 0.710151 85 5 0.66065 133 5 0.75170 133 6 0.781466 121 4 0.71211 88 5 0.97965 80 5 0.872769 174 5 0.739126 78 5 0.500000 9 0 0.94444 99 5 0.9253640 189 5 0.72515 104 4 0.71012 66 6 0.54145 65 5 0.647985 84 5 0.58696 92 5 0.81201 52 4 0.9244116 147 5 0.83930 95 5 0.475544 96 6 0.77813 151 5 0.915633 144 5 0.6580161 84 5 0.96140 146 5 0.647222 57 5 0.532135 114 5 0.79238 86 5 0.42000 12 1 0.503422 122 5 0.41442 159 5 0.88718 99 5 0.921667 76 5 0.94551 86 5 0.831318 107 3 0.64774 85 5 0.91605 0.617962 0.861343 0.94259 0.87406 0.913477 0.772796 0.896021 0.914684 0.91667 0.853220 0.90639 0.83712 0.97881 0.930116 0.889247 0.704184 0.93480 0.8981082 0.88863 0.88122 0.87526 0.892693 0.88436 0.92289 0.9195053 0.850210 0.843865 0.87943 0.893898 0.862346 0.93777 0.593336 0.66215 0.835924 0.563589 0.73364 0.48284 0.901013 0.926007 0.93733 0.83968 0.84533 3 0.878705 0.858429 0.0095180 5 0.619034 0.604610 0.01442413 0.203759 0.8038204 insignificant 1 1 insignificant 0.44470 0.917530 insignificant 1 1 insignificant 0.03051394 0.584773 lowCoverage 1 lowCoverage 0.879854 0.62909 0.246522 5 0.711293 0.45021 0.261081 6.4466e-15 9.9967e-01 hypermethylated 1.0744e-12 1.0000e+00 hypermethylated 3.7993e-05 9.9975e-01 hypermethylated 2.9225e-03 1.00000000 hypermethylated 0.216497 1.2199e-02 lowCoverage 6.4204e-01 lowCoverage 0.882974 0.87196 0.0093613 5 0.784334 0.722854 0.06148053 2.8561e-02 0.29171131 weaklyHypermeth 1.0000e+00 1.00000 insignificant 3.3150e-01 0.1853646 insignificant 1.0000e+00 1 insignificant -0.0785890 0.2411597 lowCoverage 1.00000 lowCoverage 0.864686 0.62909 0.24048510 5 0.693263 0.45021 0.243051 1.9391e-09 9.9995e-01 hypermethylated 1.4916e-07 1.00000000 hypermethylated 1.5397e-04 0.99984502 hypermethylated 1.1844e-02 1.00000 hypermethylated 0.1859828 3.0865e-02 lowCoverage 1.0000e+00 lowCoverage 0.870941 0.87196 0.0064809 5 0.766326 0.722854 0.0434720 4.3194e-01 0.41856461 insignificant 1.0000e+00 1.00000 insignificant 6.1240e-01 0.2674417 insignificant 1.0000e+00 1 insignificant -0.1091030 0.1518918 lowCoverage 1 lowCoverage 0.63603 0.87196 -0.197129 5 0.51453 0.722854 -0.208326 9.9973e-01 3.2510e-04 weaklyHypometh 1.0000000 2.0319e-02 weaklyHypometh 0.9998933 1.9854e-02 weaklyHypometh 1 7.0908e-01 insignificant -0.2950858 4.9506e-03 lowCoverage 3.0941e-01 lowCoverage chr3 5219612 5220612 31147 EDEM1 ENSG00000134109 0.92236 219 8 0.87320 142 8 0.82771 167 8 0.88765 157 5 0.896126 125 8 0.88509 358 8 0.85148 157 8 0.91498 163 6 0.92018 187 6 0.885388 161 8 0.93366 231 8 0.85223 86 8 0.932059 211 8 0.98214 69 4 0.877936 177 8 0.939277 72 5 1.00000 47 3 0.92924 195 5 0.97292 114 8 0.91295 254 8 0.56840 61 7 0.83793 107 6 0.90892 233 8 0.80753 130 8 0.89524 47 5 0.91914 204 8 0.82326 100 8 0.90218 118 8 0.85629 166 6 0.92927 246 8 0.91371 179 8 0.88430 287 8 0.87818 148 8 0.75089 58 7 1.00000 20 3 1.00000 19 1 0.92648 190 7 0.92123 170 8 0.91468 217 7 0.95017 165 7 0.83430 151 5 0.93512 165 5 0.80459 188 5 0.932759 0.85868 0.81359 0.87398 0.87877 0.87839 0.84404 0.89144 0.91020 0.88163 0.91521 0.90616 0.937808 0.97116 0.87381 0.920618 0.98394 0.91169 0.960138 0.901356 0.53080 0.88098 0.89548 0.87762 0.92600 0.89083 0.81249 0.88005 0.875933 0.92931 0.897557 0.91558 0.91457 0.68144 0.95647 0.986248 0.93129 0.91491 0.905315 0.93471 0.90741 0.95288 0.85105 5 0.89307 0.89350 -0.0010272 8 0.89943 0.88829 0.0111425 0.17164 0.647399 insignificant 1 1 insignificant 0.019401 0.986915 inconclusive 1 1 insignificant 0.0559822 0.084258 insignificant 1 insignificant 0.89307 0.91405 -0.018401 8 0.89943 0.90495 -0.0055198 2.9972e-01 0.038137 weaklyHypometh 1.0000e+00 1 insignificant 5.3130e-01 0.05959 insignificant 1.0000e+00 1 insignificant -0.0029664 9.4210e-01 insignificant 1.0000e+00 insignificant 0.89307 0.90858 -0.0242155 6 0.89943 0.91943 -0.0200004 9.0058e-01 0.05213543 insignificant 1.00000000 1.00000 insignificant 0.68201008 0.08800319 insignificant 1.000000 1.00000 insignificant 0.0220574 0.502143 insignificant 1 insignificant 0.89350 0.91405 -0.019915 8 0.88829 0.90495 -0.0166624 9.0671e-01 0.29932 insignificant 1.0000e+00 1 insignificant 9.9655e-01 0.030372 weaklyHypometh 1.0000e+00 1 insignificant -0.0589486 2.3908e-01 insignificant 1.0000e+00 insignificant 0.89350 0.90858 -0.0182394 6 0.88829 0.91943 -3.1143e-02 7.2634e-01 0.09077030 insignificant 1.0000000 1.00000 insignificant 0.84862970 0.044652 weaklyHypometh 1.00000 1 insignificant -0.0339248 0.418849 insignificant 1 insignificant 0.91405 0.90858 -0.000673 6 0.90495 0.91943 -0.014481 0.35267 1.5295e-01 insignificant 1 1.0000e+00 insignificant 0.43664 5.1981e-01 insignificant 1 1.00000000 insignificant 0.0250238 0.61172862 insignificant 1.000000 insignificant chr3 9792394 9793394 31307 CAMK1 ENSG00000134072 0.72406 320 9 0.67346 203 9 0.68712 170 9 0.73936 210 9 0.878555 100 9 0.74181 391 9 0.65684 108 9 0.72297 196 9 0.70253 126 9 0.813045 140 9 0.74016 351 9 0.66952 80 5 0.845583 183 9 0.82778 49 2 0.765925 182 9 0.731481 96 6 0.71354 76 5 0.77109 240 9 0.70699 228 9 0.78401 385 9 0.86195 103 5 0.74331 86 5 0.77844 197 9 0.70606 75 4 0.78636 62 5 0.72554 209 9 0.90548 185 4 0.74133 99 4 0.64883 168 9 0.74119 250 9 0.82966 280 9 0.67577 318 9 0.64806 168 9 0.69017 163 9 0.70885 148 8 0.89583 51 4 0.74736 184 9 0.70265 264 9 0.76350 304 9 0.84898 271 9 0.80302 278 9 0.83308 205 9 0.78249 263 9 0.832501 0.77988 0.76352 0.83473 0.93246 0.81676 0.72382 0.79840 0.82097 0.83003 0.82645 0.75696 0.863761 0.84815 0.83939 0.870309 0.82679 0.88025 0.836037 0.857153 0.90510 0.77888 0.85242 0.84043 0.81955 0.80767 0.86828 0.80620 0.771226 0.81630 0.843157 0.79899 0.76044 0.76656 0.78440 0.864652 0.82796 0.75588 0.845204 0.90720 0.88289 0.88965 0.86590 4 0.79499 0.80463 0.0033634 9 0.75894 0.76939 -0.0104550 0.65049 0.804110 insignificant 1 1 insignificant 0.956723 0.924526 insignificant 1 1 insignificant -0.0172025 0.508344 insignificant 1 insignificant 0.79483 0.74131 0.041509 9 0.74040 0.72027 0.0201230 1.1595e-01 0.991315 insignificant 1.0000e+00 1 insignificant 5.8147e-01 0.90012 insignificant 1.0000e+00 1 insignificant 0.0126397 7.4823e-01 insignificant 1.0000e+00 insignificant 0.79482 0.83497 -0.0548821 9 0.73613 0.80035 -0.0642215 1.0000e+00 0.00032999 weaklyHypometh 1.00000000 0.29138 insignificant 0.99999111 0.00083139 weaklyHypometh 1.000000 0.83139 insignificant -0.0614236 0.013124 weaklyHypometh 1 insignificant 0.80464 0.74131 0.037968 9 0.76704 0.72027 0.0467669 9.6091e-02 0.96287 insignificant 1.0000e+00 1 insignificant 3.2896e-01 0.938002 insignificant 1.0000e+00 1 insignificant 0.0298422 4.8919e-01 insignificant 1.0000e+00 insignificant 0.80457 0.83497 -0.0552042 9 0.73017 0.80035 -7.0180e-02 9.9968e-01 0.00077232 weaklyHypometh 1.0000000 0.38616 insignificant 0.99916613 0.017154 weaklyHypometh 1.00000 1 insignificant -0.0442211 0.119968 insignificant 1 insignificant 0.74150 0.83497 -0.096352 9 0.70706 0.80035 -0.093288 0.99976 5.0227e-06 weaklyHypometh 1 6.6622e-04 weaklyHypometh 0.99149 3.8524e-03 weaklyHypometh 1 0.28865821 insignificant -0.0740633 0.09740488 insignificant 1.000000 insignificant chr3 10410716 10411716 31317 MIR885 ENSG00000216135 0.88591 130 5 0.94143 130 5 0.73980 81 5 0.95608 92 5 0.825974 61 5 0.95521 288 5 0.60598 84 5 0.91750 68 5 0.90909 35 3 0.988235 55 3 0.94888 130 5 0.85000 34 5 0.933333 79 3 0.87647 56 3 0.965977 102 5 0.895833 48 3 NA 0 0 0.75714 102 3 0.89391 112 5 0.89281 221 5 0.92000 48 5 1.00000 9 0 0.87836 116 3 0.88030 58 5 NA 0 0 0.67540 197 5 0.94937 158 5 1.00000 9 0 0.78527 94 5 0.68802 172 5 0.92436 165 5 0.97806 275 5 0.75368 78 5 0.55209 130 3 0.70667 51 5 0.00000 1 0 0.77445 55 5 0.66788 219 5 0.82621 155 5 0.94539 144 5 0.70408 88 3 0.98990 100 3 0.79167 89 5 0.905083 0.93269 0.80952 0.92681 0.75758 0.93868 0.81746 0.89583 0.84848 0.98039 0.92813 0.75000 0.972222 0.96078 0.94330 0.895833 NA 0.92857 0.860215 0.898268 1.00000 1.00000 0.90838 0.86111 NA 0.91058 0.94895 1.00000 0.903880 0.91111 0.941708 0.96343 0.65613 0.55904 0.66667 NA 0.81297 0.66102 0.985758 0.97917 0.97619 0.98990 1.00000 0 0.91195 0.92544 -0.0181101 5 0.67837 0.66436 0.0140130 0.98305 0.386792 insignificant 1 1 insignificant 0.969830 0.179217 insignificant 1 1 insignificant 0.0011073 0.978790 lowCoverage 1 lowCoverage 0.91238 0.65543 0.256772 5 0.72933 0.68839 0.0409408 6.2581e-13 0.999991 hypermethylated 7.8227e-11 1 hypermethylated 1.0154e-04 0.99578 hypermethylated 7.8104e-03 1 hypermethylated 0.3052357 5.0705e-02 lowCoverage 1.0000e+00 lowCoverage 0.91243 0.96354 -0.0531446 5 0.76317 0.71131 0.0518521 5.9643e-01 0.02253588 weaklyHypometh 1.00000000 1.00000 insignificant 0.97545287 0.01672641 weaklyHypometh 1.000000 1.00000 insignificant 0.0295793 0.619406 lowCoverage 1 lowCoverage 0.92896 0.65543 0.274517 5 0.80656 0.68839 0.1181621 4.9303e-09 1.00000 hypermethylated 4.1086e-07 1 hypermethylated 6.9210e-05 0.998952 hypermethylated 5.7675e-03 1 hypermethylated 0.3041285 5.1260e-02 lowCoverage 1.0000e+00 lowCoverage 0.92681 0.96354 -0.0345157 5 0.70574 0.71131 -5.5792e-03 6.8903e-01 0.15899136 insignificant 1.0000000 1.00000 insignificant 0.99072784 0.300062 insignificant 1.00000 1 insignificant 0.0284720 0.661611 lowCoverage 1 lowCoverage 0.65543 0.96516 -0.306941 5 0.68839 0.74150 -0.053110 0.99994 4.7979e-05 hypomethylated 1 3.6907e-03 hypomethylated 0.99565 4.0412e-03 weaklyHypometh 1 0.28865821 insignificant -0.2756565 0.07365014 lowCoverage 1.000000 lowCoverage chr3 10465995 10466995 31318 ATP2B2 ENSG00000157087 0.87217 415 11 0.82504 180 8 0.69404 171 11 0.91165 332 11 0.883181 118 8 0.90079 294 11 0.86326 212 11 0.85690 148 8 0.78941 158 9 0.910212 117 10 0.89707 197 8 0.88595 121 6 0.858056 199 9 0.96667 18 2 0.797434 120 8 0.801515 89 5 0.68907 85 6 0.89066 324 10 0.89712 177 11 0.84790 260 10 0.86869 63 6 0.86279 78 7 0.80981 163 9 0.89848 62 7 0.87435 255 7 0.81888 273 9 0.67603 99 9 0.85354 79 6 0.91188 148 8 0.77272 218 8 0.85791 218 9 0.90963 324 11 0.66773 165 8 0.44209 178 11 1.00000 146 7 0.71265 192 10 0.45728 133 9 0.70321 276 11 0.84677 439 11 0.85292 305 11 0.91980 331 10 0.91405 338 11 0.81140 279 9 0.915317 0.75980 0.74771 0.92564 0.89669 0.93195 0.86089 0.85083 0.86813 0.93164 0.90095 0.89507 0.936858 0.88338 0.84847 0.696283 0.83364 0.91183 0.895482 0.865645 0.91217 0.83229 0.82887 0.85801 0.86025 0.91932 0.75774 0.85227 0.888695 0.92121 0.938473 0.91407 0.74954 0.50615 0.85175 0.756262 0.54262 0.77205 0.934959 0.93115 0.92460 0.94109 0.89965 4 0.88320 0.90192 -0.0151829 9 0.83002 0.76633 0.0636931 0.99376 0.137741 insignificant 1 1 insignificant 0.801860 0.318444 insignificant 1 1 insignificant 0.0090127 0.719561 insignificant 1 insignificant 0.88355 0.75460 0.134371 9 0.86420 0.64022 0.2239762 1.4797e-08 0.999998 weaklyHypermeth 9.8648e-07 1 weaklyHypermeth 8.5484e-08 1.00000 weaklyHypermeth 2.1371e-05 1 weaklyHypermeth 0.1880790 7.3955e-02 insignificant 1.0000e+00 insignificant 0.88332 0.92722 -0.0473008 9 0.85541 0.92447 -0.0690637 9.9999e-01 0.00450514 weaklyHypometh 1.00000000 0.84380 insignificant 0.99676705 0.06619625 insignificant 1.000000 1.00000 insignificant -0.0170826 0.527757 insignificant 1 insignificant 0.90187 0.75321 0.142767 9 0.74836 0.59097 0.1573854 1.5924e-07 1.00000 weaklyHypermeth 1.1374e-05 1 weaklyHypermeth 2.6090e-06 1.000000 weaklyHypermeth 5.2179e-04 1 weaklyHypermeth 0.1790663 8.5299e-02 insignificant 1.0000e+00 insignificant 0.90329 0.92608 -0.0288434 9 0.82528 0.84755 -2.2272e-02 9.9488e-01 0.10672056 insignificant 1.0000000 1.00000 insignificant 0.86519311 0.635333 insignificant 1.00000 1 insignificant -0.0260952 0.377993 insignificant 1 insignificant 0.75390 0.92604 -0.179564 11 0.64022 0.83485 -0.194629 1.00000 6.1186e-06 weaklyHypometh 1 6.6622e-04 weaklyHypometh 1.00000 7.0328e-05 weaklyHypometh 1 0.01406551 weaklyHypometh -0.2051615 0.05717128 insignificant 1.000000 insignificant chr3 10523069 10524069 31320 ATP2B2 ENSG00000157087 0.78966 379 11 0.78451 225 10 0.80999 241 12 0.79694 348 11 0.904285 173 10 0.89222 503 11 0.79785 178 10 0.83100 226 11 0.60002 188 11 0.933727 194 11 0.89840 359 12 0.86847 102 5 0.850736 189 10 0.91500 132 8 0.808115 253 10 0.831377 119 5 NA 0 0 0.65340 504 10 0.87572 387 12 0.87050 414 11 0.81156 127 11 0.82851 146 10 0.69219 226 9 0.78801 170 9 0.92986 121 10 0.90788 352 12 0.78002 220 11 0.71830 128 9 0.79339 282 12 0.84726 309 12 0.81682 233 10 0.89137 359 11 0.62976 288 12 0.46856 412 12 0.58712 356 9 0.12500 8 0 0.49308 255 12 0.69894 416 12 0.78800 337 11 0.81468 357 11 0.76837 289 11 0.77318 402 7 0.75470 319 12 0.815966 0.66755 0.77141 0.80008 0.82684 0.86555 0.77012 0.80408 0.71899 0.90921 0.86834 0.77330 0.782218 0.88731 0.77243 0.820720 NA 0.72194 0.852591 0.853254 0.83694 0.70294 0.80422 0.87437 0.84952 0.79804 0.70100 0.80992 0.844055 0.80552 0.850370 0.90246 0.40621 0.32803 0.49563 NA 0.40282 0.51432 0.707759 0.67211 0.67554 0.63526 0.71448 5 0.82339 0.83152 -0.0074135 11 0.68079 0.73430 -0.0535109 0.95184 0.438861 insignificant 1 1 insignificant 0.991944 0.348095 insignificant 1 1 insignificant 0.0098453 0.730051 insignificant 1 insignificant 0.82371 0.59193 0.259404 11 0.77157 0.46999 0.3015766 2.3204e-30 0.997999 hypermethylated 1.1602e-27 1 hypermethylated 2.2108e-06 0.99824 hypermethylated 3.1583e-04 1 hypermethylated 0.3265318 9.9089e-03 weaklyHypermeth 7.0294e-01 insignificant 0.82377 0.77230 0.0692007 11 0.71953 0.81086 -0.0913294 4.1733e-07 0.74924613 weaklyHypermeth 0.00013911 1.00000 weaklyHypermeth 0.00161423 0.76905206 weaklyHypermeth 0.269039 1.00000 insignificant 0.0471560 0.042616 weaklyHypermeth 1 insignificant 0.83208 0.59193 0.275419 11 0.79888 0.46999 0.3288890 2.2371e-20 0.99798 hypermethylated 1.1186e-17 1 hypermethylated 3.1294e-07 0.997666 hypermethylated 8.5851e-05 1 hypermethylated 0.3166865 1.1174e-02 weaklyHypermeth 7.4493e-01 insignificant 0.83227 0.77230 0.0859730 11 0.76070 0.81086 -5.0161e-02 4.0884e-05 0.85930141 weaklyHypermeth 0.0102210 1.00000 weaklyHypermeth 0.00096731 0.900955 weaklyHypermeth 0.19346 1 insignificant 0.0373107 0.125190 insignificant 1 insignificant 0.59330 0.77203 -0.179332 11 0.58749 0.77934 -0.191855 0.99967 2.3758e-10 weaklyHypometh 1 7.9193e-08 weaklyHypometh 0.99848 1.6566e-04 weaklyHypometh 1 0.02760927 weaklyHypometh -0.2793758 0.01944903 weaklyHypometh 1.000000 insignificant chr3 12455743 12456743 31389 PPARG ENSG00000132170 0.93990 235 6 0.79696 263 6 0.85042 117 6 0.93378 162 6 0.947100 105 6 0.81009 516 6 0.89813 176 6 0.93537 155 6 0.75720 152 6 0.984488 85 6 0.77452 294 6 0.67778 32 4 0.967262 87 6 0.93611 69 6 0.946462 173 6 0.752914 93 4 NA 0 0 0.89737 188 6 0.95906 332 6 0.94125 481 6 0.74069 94 5 0.94363 41 3 0.92638 175 6 0.81609 66 5 0.86508 27 3 0.92993 323 6 0.84597 120 5 0.97959 70 5 0.88399 237 6 0.94525 253 6 0.90672 259 6 0.96952 421 6 0.81223 232 6 0.66997 175 6 0.88403 581 6 0.75000 4 0 0.68887 166 6 0.77309 328 6 0.94075 434 6 0.92252 267 6 0.74667 102 6 0.89646 132 6 0.93145 168 6 0.930591 0.76457 0.85614 0.93447 0.95876 0.89570 0.92422 0.93352 0.90195 0.97246 0.89666 0.88639 0.947802 0.94428 0.91107 0.709852 NA 0.90324 0.954926 0.933570 0.93003 0.93369 0.92929 0.94403 0.93648 0.91080 0.84805 0.95773 0.861163 0.91958 0.888950 0.96031 0.77137 0.59646 0.84162 0.705067 0.77147 0.76305 0.940970 0.93502 0.87063 0.85044 0.90296 3 0.90956 0.92278 -0.0170121 6 0.84626 0.80854 0.0377163 0.99076 0.162831 insignificant 1 1 insignificant 0.942723 0.117986 insignificant 1 1 insignificant -0.0167995 0.565310 insignificant 1 insignificant 0.90968 0.78466 0.144943 6 0.81608 0.73268 0.0833992 3.2133e-10 0.837097 weaklyHypermeth 2.9212e-08 1 weaklyHypermeth 3.2103e-03 0.88663 weaklyHypermeth 1.6896e-01 1 insignificant 0.1162396 1.3599e-02 weaklyHypermeth 8.4995e-01 insignificant 0.90951 0.92022 -0.0099423 6 0.80782 0.81658 -0.0087600 1.9360e-01 0.27638370 insignificant 1.00000000 1.00000 insignificant 0.26018353 0.79030100 insignificant 1.000000 1.00000 insignificant -0.0083008 0.847304 insignificant 1 insignificant 0.92478 0.78466 0.163190 6 0.92291 0.73268 0.1902330 2.1328e-09 0.90635 weaklyHypermeth 1.9389e-07 1 weaklyHypermeth 4.3880e-04 0.993922 weaklyHypermeth 2.7425e-02 1 weaklyHypermeth 0.1330390 6.8560e-03 weaklyHypermeth 5.2738e-01 insignificant 0.92363 0.92022 0.0042192 6 0.88567 0.81658 6.9095e-02 1.0105e-01 0.59625023 insignificant 1.0000000 1.00000 insignificant 0.11308310 0.979033 insignificant 1.00000 1 insignificant 0.0084987 0.842851 insignificant 1 insignificant 0.78466 0.92105 -0.147544 6 0.73268 0.93323 -0.200553 0.93205 8.0796e-04 weaklyHypometh 1 4.2752e-02 weaklyHypometh 0.94231 5.5202e-02 insignificant 1 1.00000000 insignificant -0.1245404 0.03119854 weaklyHypometh 1.000000 insignificant chr3 12866766 12867766 31398 SNORA7A ENSG00000144713 0.94031 160 7 0.89107 145 7 0.82832 135 7 0.92168 90 7 0.952381 42 5 0.86914 355 7 0.87345 54 5 0.92615 272 5 0.82981 210 6 0.973669 101 7 0.88392 408 7 0.86867 80 7 0.900467 439 7 1.00000 9 1 0.903408 112 7 0.800000 8 0 0.93939 52 7 0.89143 119 7 0.96825 129 7 0.92522 382 7 0.90165 166 6 0.86093 64 5 0.93418 197 7 0.86324 244 5 0.91667 65 5 0.92578 177 7 0.86377 274 7 0.92869 55 5 0.96165 103 5 0.91468 143 7 0.95445 151 7 0.92452 440 7 0.87946 145 7 0.91961 184 7 0.83483 72 5 0.88846 64 5 0.70899 212 6 0.87187 167 7 0.92278 139 7 0.95106 206 7 0.95432 57 7 0.93479 115 7 0.93617 302 7 0.950306 0.90892 0.83546 0.90903 0.98333 0.88987 0.84898 0.90295 0.83292 0.96627 0.90543 0.86858 0.880968 NA 0.90836 0.936285 0.96474 0.90003 0.984596 0.922324 0.87710 0.81838 0.92012 0.85495 0.95758 0.94728 0.85552 0.90088 0.947400 0.92469 0.962380 0.92866 0.89855 0.91259 0.84240 0.887360 0.77647 0.89362 0.926667 0.94830 0.94333 0.91542 0.93824 5 0.89824 0.90861 -0.0073381 7 0.89239 0.90793 -0.0155429 0.89609 0.118523 insignificant 1 1 insignificant 0.739618 0.247740 insignificant 1 1 insignificant -0.0081814 0.593774 insignificant 1 insignificant 0.89824 0.87204 0.030483 7 0.89239 0.85458 0.0378149 4.7910e-02 0.997297 weaklyHypermeth 1.0000e+00 1 insignificant 3.1267e-02 0.99808 weaklyHypermeth 1.0000e+00 1 insignificant 0.0538002 1.4553e-01 insignificant 1.0000e+00 insignificant 0.89824 0.93651 -0.0399644 7 0.89239 0.93829 -0.0458952 9.9735e-01 0.00506278 weaklyHypometh 1.00000000 0.84380 insignificant 0.96840911 0.19358064 insignificant 1.000000 1.00000 insignificant -0.0354851 0.011391 weaklyHypometh 1 insignificant 0.90861 0.87204 0.039133 7 0.90793 0.85458 0.0533579 4.2661e-03 0.99973 weaklyHypermeth 1.2547e-01 1 insignificant 7.0895e-03 0.999485 weaklyHypermeth 2.7267e-01 1 insignificant 0.0619816 1.0018e-01 insignificant 1.0000e+00 insignificant 0.90861 0.93651 -0.0320828 7 0.90793 0.93829 -3.0352e-02 9.3336e-01 0.05411473 insignificant 1.0000000 1.00000 insignificant 0.71411053 0.432770 insignificant 1.00000 1 insignificant -0.0273037 0.030408 weaklyHypometh 1 insignificant 0.87204 0.93651 -0.068700 7 0.85458 0.93829 -0.083710 0.99997 8.1228e-04 weaklyHypometh 1 4.2752e-02 weaklyHypometh 0.99979 6.9240e-03 weaklyHypometh 1 0.36442008 insignificant -0.0892853 0.03182606 weaklyHypometh 1.000000 insignificant chr3 13700517 13701517 31408 FBLN2 ENSG00000163520 0.86497 193 8 0.80758 377 9 0.74070 313 7 0.93596 157 8 0.845039 188 7 0.86093 343 9 0.69174 320 8 0.85181 277 9 0.50716 93 5 0.784515 159 8 0.87078 483 9 0.91186 185 8 0.855085 221 8 0.91962 92 4 0.838860 267 8 0.796262 131 8 0.68468 76 4 0.75248 150 6 0.84654 363 8 0.81465 284 9 0.76821 88 8 0.84309 68 5 0.82940 100 8 0.83000 113 5 0.94146 107 6 0.91758 453 8 0.82192 98 9 0.69189 71 6 0.88137 220 9 0.84273 441 8 0.76439 374 8 0.92931 303 9 0.30725 230 11 0.27643 225 9 0.20629 284 9 0.33333 28 2 0.41047 265 9 0.32850 480 9 0.70522 229 5 0.88234 154 8 0.82946 97 6 0.57778 27 1 0.76206 145 5 0.869848 0.85898 0.77446 0.92421 0.86991 0.86487 0.86606 0.86208 0.61500 0.86948 0.88477 0.90895 0.838897 0.85818 0.88680 0.732830 0.84960 0.75703 0.861601 0.878519 0.85366 0.75624 0.88799 0.92790 0.90432 0.90818 0.88573 0.78971 0.822540 0.91330 0.853409 0.94232 0.45800 0.28110 0.22567 0.335616 0.44155 0.30423 0.784732 0.83425 0.83493 0.82134 0.72557 1 0.86962 0.89039 -0.0277790 9 0.81680 0.83586 -0.0190611 0.98582 0.011766 weaklyHypometh 1 1 insignificant 0.991447 0.062965 insignificant 1 1 insignificant -0.0293856 0.345059 insignificant 1 insignificant 0.86962 0.32474 0.560538 9 0.81680 0.31282 0.5039761 3.4122e-74 0.999974 hypermethylated 3.4122e-71 1 hypermethylated 1.4931e-18 0.99999 hypermethylated 1.4931e-15 1 hypermethylated 0.4986823 6.8850e-09 hypermethylated 2.2950e-06 hypermethylated 0.86962 0.80521 0.0552083 6 0.81680 0.78355 0.0332482 5.2745e-04 0.95630928 weaklyHypermeth 0.06593145 1.00000 weaklyHypermeth 0.19962448 0.93241995 insignificant 1.000000 1.00000 insignificant 0.0576919 0.355326 insignificant 1 insignificant 0.89039 0.32474 0.564767 9 0.83586 0.31282 0.5230372 7.4276e-55 1.00000 hypermethylated 7.4276e-52 1 hypermethylated 1.4619e-17 1.000000 hypermethylated 1.4619e-14 1 hypermethylated 0.5280679 1.1189e-08 hypermethylated 1.1189e-05 hypermethylated 0.89039 0.80521 0.0814872 6 0.83586 0.78355 5.2309e-02 1.1053e-04 0.99527006 weaklyHypermeth 0.0221055 1.00000 weaklyHypermeth 0.04860412 0.987456 weaklyHypermeth 1.00000 1 insignificant 0.0870775 0.182363 insignificant 1 insignificant 0.32474 0.80521 -0.509989 6 0.31282 0.78355 -0.470728 1.00000 9.4416e-17 hypomethylated 1 4.7208e-14 hypomethylated 1.00000 1.1973e-06 hypomethylated 1 0.00062252 hypomethylated -0.4409904 0.00028235 hypomethylated 0.093885 hypomethylated chr3 14420258 14421258 31422 SLC6A6 ENSG00000131389 0.57870 80 4 0.53184 92 5 0.42874 89 5 0.62048 74 3 0.522062 61 3 0.78469 107 4 0.36453 92 3 0.39790 81 5 0.41941 94 5 0.601388 63 5 0.63822 143 5 0.41413 69 5 0.373333 84 4 0.16667 6 1 0.450882 62 5 0.588068 71 5 0.21444 53 4 0.31765 45 3 0.32051 83 5 0.56618 79 4 0.70897 80 5 0.28409 25 2 0.59724 57 5 0.45393 45 5 0.68327 106 3 0.46135 97 5 0.46633 78 4 0.16566 34 3 0.53298 76 5 0.39577 117 5 0.45987 115 5 0.65111 115 4 0.39176 102 5 0.17564 76 5 0.50000 129 4 0.26667 56 1 0.37778 50 4 0.37778 101 5 0.51429 54 3 0.25586 87 3 0.26968 63 3 0.25000 39 2 0.47917 80 3 0.523148 0.57661 0.51456 0.61224 0.60558 0.73927 0.49352 0.41346 0.48482 0.71905 0.73695 0.47663 0.450000 0.51558 0.47353 0.702711 0.28409 0.39706 0.405932 0.553838 0.80288 0.28409 0.76437 0.52039 0.58209 0.55166 0.59764 0.16021 0.557389 0.45851 0.518915 0.69333 0.47006 0.21955 0.50000 0.333333 0.47222 0.47222 0.520635 0.32379 0.35018 0.31250 0.48927 1 0.46008 0.48677 -0.0201228 5 0.51478 0.40967 0.1051099 0.80977 0.398265 insignificant 1 1 insignificant 0.945872 0.494547 insignificant 1 1 insignificant -0.0233904 0.688917 lowCoverage 1 lowCoverage 0.45932 0.24903 0.147590 5 0.46774 0.34772 0.1200164 2.0954e-04 0.977391 weaklyHypermeth 9.9781e-03 1 weaklyHypermeth 1.3848e-04 0.96212 weaklyHypermeth 9.8917e-03 1 weaklyHypermeth 0.1167204 6.5662e-02 lowCoverage 1.0000e+00 lowCoverage 0.45932 0.42415 0.1383300 3 0.46774 0.30837 0.1593652 7.4646e-05 0.99999588 lowCoverage 0.01492913 1.00000 lowCoverage 0.00048307 0.99977846 lowCoverage 0.096613 1.00000 lowCoverage 0.1111915 0.145672 lowCoverage 1 lowCoverage 0.48729 0.24903 0.160319 5 0.49161 0.34772 0.1438845 1.1785e-05 0.99598 weaklyHypermeth 6.9323e-04 1 weaklyHypermeth 2.7477e-05 0.947096 weaklyHypermeth 2.4979e-03 1 weaklyHypermeth 0.1401108 4.9995e-02 lowCoverage 1.0000e+00 lowCoverage 0.48729 0.42415 0.1468085 3 0.49161 0.30837 1.8323e-01 1.1829e-05 0.99999716 lowCoverage 0.0039429 1.00000 lowCoverage 0.00046987 0.998903 lowCoverage 0.11747 1 lowCoverage 0.1345819 0.104790 lowCoverage 1 lowCoverage 0.24903 0.42415 0.018903 3 0.34772 0.30837 0.039349 0.16392 1.1129e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.44306 4.1008e-01 lowCoverage 1 1.00000000 lowCoverage -0.0055289 0.94266065 lowCoverage 1.000000 lowCoverage chr3 14550479 14551479 31424 ENSG00000207163 0.21877 173 6 0.19466 226 6 0.33086 130 5 0.25929 230 6 0.076546 155 5 0.38438 311 6 0.24284 160 6 0.26138 169 5 0.10360 276 5 0.094544 197 5 0.23454 184 6 0.26976 103 5 0.041321 234 5 0.14060 128 5 0.081561 232 5 0.045139 145 5 0.18559 83 4 0.27414 208 5 0.11815 149 6 0.21759 236 6 0.32032 107 5 0.33879 171 4 0.23494 199 6 0.20791 132 6 0.29466 161 6 0.19630 293 6 0.20824 194 5 0.20554 143 5 0.10152 200 5 0.30616 265 6 0.16957 251 6 0.37920 201 6 0.17788 217 6 0.36149 152 6 0.20355 224 5 0.17685 48 4 0.30086 160 6 0.14286 181 6 0.21341 350 6 0.26552 265 6 0.20221 226 6 0.22052 221 5 0.23982 231 6 0.078098 0.19309 0.31392 0.15389 0.10681 0.33979 0.18975 0.14932 0.15192 0.13984 0.21560 0.20619 0.060317 0.19449 0.11144 0.080327 0.18600 0.15273 0.045953 0.078247 0.35365 0.09644 0.20792 0.08334 0.20096 0.15474 0.21439 0.20050 0.085822 0.15074 0.095188 0.32476 0.17381 0.31689 0.16803 0.053108 0.30504 0.00000 0.069549 0.19272 0.10650 0.24253 0.15268 5 0.16631 0.18194 -0.0231772 6 0.18594 0.23083 -0.0448911 0.98557 0.101487 insignificant 1 1 insignificant 0.990777 0.077906 insignificant 1 1 insignificant -0.0581661 0.079033 insignificant 1 insignificant 0.16631 0.17755 -0.015746 6 0.18594 0.21250 -0.0265573 9.2167e-01 0.416672 insignificant 1.0000e+00 1 insignificant 7.0359e-01 0.82250 insignificant 1.0000e+00 1 insignificant -0.0384856 3.7080e-01 insignificant 1.0000e+00 insignificant 0.16667 0.18484 0.0078191 6 0.21251 0.22080 -0.0082972 7.2204e-01 0.18545210 insignificant 1.00000000 1.00000 insignificant 0.90968318 0.13045040 insignificant 1.000000 1.00000 insignificant -0.0395340 0.119034 insignificant 1 insignificant 0.18221 0.17737 0.014676 6 0.26074 0.18889 0.0718523 3.5481e-01 0.83261 insignificant 1.0000e+00 1 insignificant 3.0648e-01 0.974385 insignificant 1.0000e+00 1 insignificant 0.0196805 6.4816e-01 insignificant 1.0000e+00 insignificant 0.18190 0.18484 0.0299660 6 0.23524 0.22080 1.4436e-02 4.6094e-01 0.51803299 insignificant 1.0000000 1.00000 insignificant 0.49960760 0.590367 insignificant 1.00000 1 insignificant 0.0186322 0.482106 insignificant 1 insignificant 0.17773 0.18484 0.023590 6 0.24286 0.22080 0.022054 0.67408 7.3207e-01 insignificant 1 1.0000e+00 insignificant 0.98323 2.7047e-01 insignificant 1 1.00000000 insignificant -0.0010484 0.97797761 insignificant 1.000000 insignificant chr3 17955709 17956709 31597 ENSG00000213890 0.96675 280 5 0.92424 89 5 0.96667 22 3 0.97627 171 5 0.950000 23 2 0.97206 324 5 1.00000 71 5 1.00000 38 5 1.00000 4 0 1.000000 14 0 0.90024 102 5 1.00000 14 0 1.000000 3 0 1.00000 4 0 0.982143 24 2 1.000000 18 3 NA 0 0 0.92132 391 5 0.92724 100 5 0.95070 133 5 0.47500 19 2 1.00000 30 3 0.81616 51 5 0.83333 20 3 0.94696 209 5 0.94333 111 5 0.83333 17 2 0.83333 14 0 0.99259 163 5 0.97950 100 5 0.96941 174 5 0.91092 180 5 0.93768 98 5 0.92977 85 5 0.93750 38 2 0.96818 105 5 0.74048 65 5 0.87314 184 5 0.94187 275 5 0.97771 142 5 0.94316 248 5 0.99583 157 5 0.96928 128 5 0.968401 0.94697 0.95833 0.97293 0.96875 0.97768 1.00000 1.00000 0.97935 1.00000 0.90590 1.00000 0.989213 0.97935 0.98438 0.989213 NA 0.91786 0.920170 0.944186 0.85000 1.00000 0.83965 1.00000 0.94277 0.95417 1.00000 1.00000 0.995370 0.97937 0.963275 0.91067 0.93400 0.91764 0.96094 0.980114 0.83958 0.85278 0.947479 0.97714 0.93906 0.99740 0.96993 0 0.95397 0.94026 0.0122275 5 0.97278 0.71671 0.2560701 0.35429 0.968018 insignificant 1 1 insignificant 0.237838 0.984569 insignificant 1 1 insignificant 0.0925786 0.049755 lowCoverage 1 lowCoverage 0.95392 0.90418 0.050036 5 0.96371 0.74711 0.2165983 3.9354e-04 0.983259 weaklyHypermeth 1.7110e-02 1 weaklyHypermeth 4.2276e-02 0.99844 weaklyHypermeth 1.0000e+00 1 insignificant 0.0726121 8.5777e-02 lowCoverage 1.0000e+00 lowCoverage 0.95390 0.96105 -0.0077444 5 0.95645 0.96178 -0.0053303 6.5734e-01 0.35649646 insignificant 1.00000000 1.00000 insignificant 0.17840008 0.96074271 insignificant 1.000000 1.00000 insignificant 0.0048316 0.714576 lowCoverage 1 lowCoverage 0.94455 0.90418 0.043144 5 0.87228 0.74711 0.1251714 5.6604e-03 0.97387 weaklyHypermeth 1.6173e-01 1 insignificant 1.6118e-01 0.997238 insignificant 1.0000e+00 1 insignificant -0.0199665 7.1513e-01 lowCoverage 1.0000e+00 lowCoverage 0.94537 0.96105 -0.0162871 5 0.94674 0.96178 -1.5043e-02 9.2779e-01 0.24665440 insignificant 1.0000000 1.00000 insignificant 0.60467877 0.800985 insignificant 1.00000 1 insignificant -0.0877470 0.062967 lowCoverage 1 lowCoverage 0.90576 0.96105 -0.055416 5 0.89653 0.96178 -0.065248 0.99359 8.9112e-03 weaklyHypometh 1 3.0728e-01 insignificant 0.95966 3.7142e-01 insignificant 1 1.00000000 insignificant -0.0677805 0.10519663 lowCoverage 1.000000 lowCoverage chr3 20227966 20228966 31915 SGOL1 ENSG00000129810 0.83539 483 16 0.68735 149 10 0.82496 140 11 0.88258 375 15 0.860567 56 5 0.83052 485 14 0.92326 101 7 0.91187 102 8 0.83274 75 7 0.776461 93 6 0.89416 216 15 0.81746 51 6 0.858572 144 9 NA 0 0 0.895885 96 9 0.905093 60 6 0.69706 66 3 0.82234 399 14 0.92079 194 15 0.87944 354 15 0.96667 22 0 0.79795 160 12 0.87644 237 16 0.61709 62 7 0.90573 111 8 0.81988 231 15 0.83480 93 7 0.93516 37 5 0.75520 109 8 0.82375 174 14 0.70997 203 14 0.85509 462 15 0.82152 135 9 0.87167 122 10 0.83514 268 15 0.80354 85 8 0.83030 60 6 0.76206 238 13 0.89211 406 15 0.83185 471 15 0.91603 358 15 0.91705 353 15 0.90304 488 15 0.848366 0.76998 0.84695 0.91362 0.87391 0.81184 0.92233 0.93456 0.83385 0.90735 0.89575 0.77184 0.880043 NA 0.87428 0.906815 0.78760 0.87068 0.954628 0.899434 0.93417 0.82922 0.89836 0.82648 0.93564 0.84106 0.70108 0.85764 0.808208 0.87786 0.759637 0.90998 0.76896 0.78701 0.83958 0.796115 0.90536 0.86934 0.905004 0.93609 0.89868 0.94158 0.90476 4 0.86782 0.85134 0.0159572 14 0.82558 0.83192 -0.0063359 0.10437 0.832213 insignificant 1 1 insignificant 0.124638 0.700970 insignificant 1 1 insignificant 0.0202670 0.535771 insignificant 1 insignificant 0.86826 0.83370 0.035171 14 0.85635 0.81510 0.0412433 1.0639e-02 0.985245 weaklyHypermeth 3.2240e-01 1 insignificant 1.5419e-01 0.99158 insignificant 1.0000e+00 1 insignificant 0.0243727 2.7196e-01 insignificant 1.0000e+00 insignificant 0.86782 0.91614 -0.0453548 14 0.82558 0.86128 -0.0357015 9.9997e-01 0.00058277 weaklyHypometh 1.00000000 0.29138 insignificant 0.99699387 0.04460668 weaklyHypometh 1.000000 1.00000 insignificant -0.0469341 0.053215 insignificant 1 insignificant 0.85079 0.83370 0.021526 13 0.82141 0.81510 0.0063085 1.5438e-01 0.83971 insignificant 1.0000e+00 1 insignificant 2.3133e-01 0.893990 insignificant 1.0000e+00 1 insignificant 0.0041057 8.9900e-01 insignificant 1.0000e+00 insignificant 0.85060 0.91570 -0.0586758 14 0.81348 0.81343 4.3605e-05 9.9991e-01 0.00035590 weaklyHypometh 1.0000000 0.35590 insignificant 0.89879466 0.032042 weaklyHypometh 1.00000 1 insignificant -0.0672011 0.054625 insignificant 1 insignificant 0.83370 0.91659 -0.080040 13 0.81510 0.91511 -0.100009 1.00000 8.1772e-06 weaklyHypometh 1 7.4338e-04 weaklyHypometh 0.99978 6.2978e-03 weaklyHypometh 1 0.34987923 insignificant -0.0713068 0.00966255 weaklyHypometh 0.774849 insignificant chr3 32885784 32886784 32633 TRIM71 ENSG00000206557 0.018523 527 10 0.035145 419 10 0.047155 508 10 0.0041476 388 6 0.0033807 403 10 0.022855 466 10 0.0094996 691 10 0.0018519 419 10 0.0044881 603 10 0.0036111 500 10 0.017076 454 10 0.0059614 523 10 0.0036797 438 10 0.00000 27 3 0.0068512 599 10 0.003834 676 10 0.0070644 582 7 0.082473 540 8 0.0082129 388 10 0.011084 404 10 0.0083333 85 9 0.0178571 132 6 0.027202 345 10 0.0058824 150 10 0.046717 125 6 0.0068966 515 10 0.00000 198 10 0.033058 121 10 0.021830 370 10 0.0012821 550 10 0.003125 447 10 0.010362 473 10 0.486419 308 10 0.539185 283 10 0.62103 145 6 0.417065 47 3 0.604964 92 7 0.634498 383 10 0.11521 404 9 0.238841 380 9 0.069724 348 7 0.119116 218 6 0.2272563 339 7 0.021538 0.030393 0.039309 0.0036568 0.00049753 0.015838 0.0068602 4.8478e-05 0.00096045 0.0053083 0.020736 0.0092236 0.0056379 0.0075578 0.010519 0.0080335 0.0186947 0.068771 0.0039226 0.0075292 0.018543 0.0118841 0.011304 0.013089 0.041216 0.0059578 0.000000 0.042361 0.020384 0.00033562 0.0028632 0.020876 0.389784 0.485111 0.52596 0.395906 0.693963 0.619630 0.098892 0.158263 0.054357 0.106381 0.1595122 6 0.018420 0.011678 0.0082068 10 0.019574 0.010855 0.0087197 0.15861 0.9950429 insignificant 1 1 insignificant 0.065854 0.999047 insignificant 1 1 insignificant -0.00036749 0.95240 insignificant 1 insignificant 0.018422 0.501590 -0.48673369 10 0.021532 0.580895 -0.559363 1.0000e+00 6.7761e-84 hypomethylated 1.0000e+00 6.7761e-81 hypomethylated 1.0000e+00 4.5142e-26 hypomethylated 1.0000e+00 4.5142e-23 hypomethylated -0.535682 1.7938e-05 hypomethylated 0.0059794 hypomethylated 0.018422 0.139728 -0.122499 7 0.021532 0.156278 -0.134747 1.0000e+00 3.7830e-26 weaklyHypometh 1.000000 3.783e-23 weaklyHypometh 0.99999661 1.7438e-10 weaklyHypometh 1.00000 1.7438e-07 weaklyHypometh -0.13918507 0.013556 weaklyHypometh 1 insignificant 0.011684 0.501590 -0.489592 10 0.011940 0.580895 -0.568955 1.0000e+00 6.3524e-59 hypomethylated 1.000e+00 6.3524e-56 hypomethylated 1.0000e+00 1.8093e-23 hypomethylated 1.0000e+00 1.8093e-20 hypomethylated -0.535314 1.8443e-05 hypomethylated 0.0061475 hypomethylated 0.011684 0.139728 -0.122568 7 0.011940 0.156278 -0.144338 1.00000000 1.1492e-22 weaklyHypometh 1.00000 1.1492e-19 weaklyHypometh 1.0000000 3.7282e-10 weaklyHypometh 1 3.7282e-07 weaklyHypometh -0.138818 0.013748 weaklyHypometh 1 insignificant 0.501590 0.139728 0.410118 7 0.580895 0.156278 0.4246165 1.9273e-17 1.0000e+00 hypermethylated 1.9273e-14 1.0000000 hypermethylated 6.6223e-10 1.0000000 hypermethylated 6.6223e-07 1.00000 hypermethylated 0.3964968 1.9109e-05 hypermethylated 0.019109 hypermethylated chr3 40601061 40602061 32893 ZNF621 ENSG00000172888 0.033667 208 5 0.034443 251 5 0.088040 142 5 0.0411187 179 5 0.0047619 114 5 0.057738 285 5 0.0318928 217 5 0.0396032 156 5 0.0261808 216 5 0.0231990 188 5 0.189647 205 7 0.0427920 154 5 0.0131195 231 5 0.17143 57 5 0.0372515 189 5 0.000000 119 5 0.0071429 166 5 0.009756 250 5 0.0667481 77 5 0.046176 244 5 0.1229091 106 5 0.0074074 156 5 0.048489 108 5 0.0390805 82 5 0.025000 171 5 0.0297619 212 5 0.05649 157 5 0.054690 83 5 0.091089 116 5 0.0378368 211 5 0.093328 194 5 0.042254 275 5 0.028192 157 5 0.023118 143 5 0.00000 136 5 0.021053 118 5 0.034762 119 5 0.012343 149 5 0.03117 287 5 0.038705 241 5 0.022303 269 5 0.017984 233 5 0.0076923 278 5 0.038075 0.066328 0.026114 0.0464308 0.00790960 0.063452 0.0352200 5.8038e-02 0.02776825 0.0315624 0.077286 0.0425998 0.0208838 0.0457627 0.040120 0.0000000 0.0084746 0.010955 0.0642172 0.0510562 0.140046 0.0071406 0.051632 0.062283 0.028072 0.0467867 0.075125 0.059429 0.096806 0.05771526 0.0724342 0.047460 0.030903 0.026369 0.00000 0.023640 0.034569 0.011416 0.033783 0.042954 0.024618 0.019503 0.0086375 5 0.038947 0.059327 -0.0185202 5 0.107740 0.049785 0.0579555 0.22912 0.3093354 insignificant 1 1 insignificant 0.387177 0.269856 insignificant 1 1 insignificant -0.00579264 0.69653 insignificant 1 insignificant 0.036761 0.019465 0.01768000 5 0.033923 0.018329 0.015594 1.6499e-01 6.9759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0040e-01 9.2533e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.028324 3.0290e-02 weaklyHypermeth 1.0000000 insignificant 0.036761 0.024465 0.011614 5 0.033923 0.023121 0.010802 3.0085e-01 8.5663e-01 insignificant 1.000000 1.000e+00 insignificant 0.24090195 8.8815e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02466459 0.059339 insignificant 1 insignificant 0.059267 0.019465 0.037667 5 0.051084 0.018329 0.032755 4.4384e-02 4.9853e-01 weaklyHypermeth 1.000e+00 1.0000e+00 insignificant 2.7093e-02 6.9580e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.034117 6.1368e-03 weaklyHypermeth 0.5578880 insignificant 0.059267 0.024465 0.032833 5 0.051084 0.023121 0.027963 0.14442822 9.8013e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2179637 9.4027e-01 insignificant 1 1.0000e+00 insignificant 0.030457 0.013700 weaklyHypermeth 1 insignificant 0.019465 0.024465 -0.006220 5 0.018329 0.023121 -0.0047918 5.6133e-01 5.3896e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.1467e-01 0.3447887 insignificant 1.0000e+00 1.00000 insignificant -0.0036593 6.2998e-01 insignificant 1.000000 insignificant chr3 41446665 41447665 32940 CTNNB1 ENSG00000168036 0.935333 123 5 0.954248 86 5 1.000000 11 0 0.9600000 50 5 0.8666667 15 0 0.928114 83 5 0.8000000 19 0 NA 0 0 NA 0 0 0.9000000 10 0 0.894206 172 5 NA 0 0 1.0000000 16 0 0.80000 9 0 0.9500000 20 0 NA 0 0 NA 0 0 0.942415 80 5 NA 0 0 0.914286 25 3 0.9000000 29 5 0.9333333 60 5 0.945455 50 5 0.7648810 37 5 0.947368 94 5 0.9333333 75 5 0.82500 40 5 0.880952 15 0 1.000000 55 5 1.0000000 20 0 0.977778 45 5 0.983333 60 5 0.936364 107 5 0.900000 20 0 0.98333 120 5 0.000000 3 0 0.625794 30 4 0.920000 25 5 0.97647 85 5 0.991304 112 5 0.966667 60 5 0.400000 5 0 0.9515152 164 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.922114 0.939655 -0.0177476 5 0.943802 0.886549 0.0572524 0.77461 0.1635678 insignificant 1 1 insignificant 0.770331 0.581468 insignificant 1 1 insignificant -0.00676697 0.80104 lowCoverage 1 lowCoverage 0.922006 0.921311 -0.00023554 5 0.934435 0.771064 0.163372 6.3731e-01 5.9942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1679e-01 9.1692e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.189937 2.7470e-01 lowCoverage 1.0000000 lowCoverage 0.921788 0.962441 -0.040694 5 0.921323 0.962544 -0.041222 9.5094e-01 5.4423e-02 insignificant 1.000000 1.000e+00 insignificant 0.76284854 3.9010e-01 insignificant 1.00000 1.0000e+00 insignificant 0.06032786 0.628481 lowCoverage 1 lowCoverage 0.939551 0.921311 0.017939 5 0.867641 0.771064 0.096577 3.8524e-01 8.3488e-01 insignificant 1.000e+00 1.0000e+00 insignificant 1.7652e-01 9.8858e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.196704 2.6065e-01 lowCoverage 1.0000000 lowCoverage 0.941075 0.962441 -0.021072 5 0.941169 0.962544 -0.021375 0.73281280 2.9781e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2758884 3.9352e-01 insignificant 1 1.0000e+00 insignificant 0.067095 0.593220 lowCoverage 1 lowCoverage 0.924342 0.962441 -0.037654 5 0.925276 0.962544 -0.0372681 9.3418e-01 3.0195e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4427e-01 0.1685440 insignificant 1.0000e+00 1.00000 insignificant -0.1296096 5.1766e-01 lowCoverage 1.000000 lowCoverage chr3 42520916 42521916 32956 VIPR1 ENSG00000114812 0.960000 19 1 NA 0 0 NA 0 0 0.8642857 39 5 NA 0 0 0.742593 23 2 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.6250000 10 0 1.000000 1 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.8666667 48 4 NA 0 0 NA 0 0 NA 0 0 0.9250000 33 4 0.952381 31 4 1.000000 28 4 NA 0 0 NA 0 0 1.00000 130 5 0.888200 175 5 NA 0 0 0.977778 37 4 0.96667 55 5 0.933333 41 5 0.812500 71 5 0.547619 29 4 0.9305556 44 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.826087 0.948905 -0.1242807 0 0.809730 0.958088 -0.1483582 0.99564 0.0050641 noCoverage 1 1 noCoverage 0.994683 0.094867 noCoverage 1 1 noCoverage -0.09763624 0.24623 lowCoverage 1 lowCoverage 0.826087 0.941520 -0.11449657 0 0.809730 0.936351 -0.126621 9.9312e-01 1.6397e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.9404e-01 1.8058e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.116950 1.8544e-01 lowCoverage 1.0000000 lowCoverage 0.826087 0.854167 -0.021068 0 0.809730 0.856479 -0.046749 7.9506e-01 3.1711e-01 noCoverage 1.000000 1.000e+00 noCoverage 0.73938724 7.6282e-01 noCoverage 1.00000 1.0000e+00 noCoverage 0.00024074 0.998207 lowCoverage 1 lowCoverage 0.948905 0.941520 0.002387 0 0.958088 0.936351 0.021737 5.1986e-01 7.5351e-01 noCoverage 1.000e+00 1.0000e+00 noCoverage 8.8632e-01 8.7787e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.019314 6.8241e-01 lowCoverage 1.0000000 lowCoverage 0.948905 0.854167 0.100441 0 0.958088 0.856479 0.101609 0.01885600 9.9889e-01 noCoverage 1.00000 1.0000e+00 noCoverage 0.0169534 9.9951e-01 noCoverage 1 1.0000e+00 noCoverage 0.097877 0.286519 lowCoverage 1 lowCoverage 0.941520 0.854167 0.086547 5 0.936351 0.856479 0.0798717 3.7298e-02 9.7984e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 2.2198e-02 0.9983829 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.1171911 2.2047e-01 lowCoverage 1.000000 lowCoverage chr3 42718761 42719761 32966 HHATL ENSG00000010282 0.876848 265 6 0.824694 176 6 0.617628 210 6 0.9267908 260 6 0.7485007 77 4 0.795966 361 7 0.9089286 122 6 0.8912959 225 6 0.7904433 169 6 0.7491986 166 6 0.930562 299 6 0.7228058 67 6 0.8266363 204 6 0.89246 87 4 0.7361135 176 6 0.571632 76 5 0.9000000 25 3 0.755590 283 6 0.7482517 275 6 0.779258 310 6 0.8047950 194 6 0.5740766 162 5 0.870239 165 6 0.6500462 136 6 0.812160 83 5 0.7453525 298 6 0.56787 159 6 0.880469 125 7 0.799276 226 6 0.7304216 300 6 0.848669 258 6 0.740804 326 6 0.546493 210 6 0.463485 176 6 0.53993 236 5 0.664712 59 4 0.440822 191 7 0.532178 373 6 0.74236 286 6 0.570404 261 6 0.774381 235 6 0.748662 249 6 0.8325528 273 6 0.875497 0.802847 0.606648 0.9252982 0.77875001 0.842134 0.8929739 8.5794e-01 0.87022786 0.8667755 0.904346 0.7830262 0.8723149 0.8631409 0.864150 0.6176463 0.9010904 0.737441 0.8392401 0.8378195 0.837514 0.6987397 0.821163 0.693748 0.822696 0.8498247 0.681445 0.891056 0.778199 0.84537548 0.8265295 0.895657 0.478149 0.272416 0.50925 0.675414 0.554065 0.554809 0.731964 0.694130 0.753191 0.754346 0.7832966 6 0.831203 0.818257 0.0163902 6 0.806024 0.749715 0.0563096 0.41445 0.7400577 insignificant 1 1 insignificant 0.065232 0.986131 insignificant 1 1 insignificant 0.04766519 0.22144 insignificant 1 insignificant 0.831203 0.456225 0.36845327 6 0.806024 0.509097 0.296927 1.4089e-20 9.9994e-01 hypermethylated 7.0443e-18 1.0000e+00 hypermethylated 4.1670e-08 1.0000e+00 hypermethylated 2.1397e-05 1.0000e+00 hypermethylated 0.268410 3.7525e-05 hypermethylated 0.0075050 hypermethylated 0.831159 0.731595 0.088647 6 0.778313 0.711827 0.066486 2.5542e-05 9.7454e-01 weaklyHypermeth 0.012771 1.000e+00 weaklyHypermeth 0.00020683 9.7333e-01 weaklyHypermeth 0.10341 1.0000e+00 insignificant 0.06600837 0.225535 insignificant 1 insignificant 0.818257 0.456225 0.357766 6 0.749715 0.509097 0.240617 1.2728e-13 9.9994e-01 hypermethylated 6.364e-11 1.0000e+00 hypermethylated 1.9983e-07 9.9997e-01 hypermethylated 9.9914e-05 1.0000e+00 hypermethylated 0.220745 2.4114e-04 hypermethylated 0.0301428 hypermethylated 0.818519 0.731595 0.077732 6 0.785388 0.711827 0.073561 0.00046062 9.7083e-01 weaklyHypermeth 0.23031 1.0000e+00 insignificant 0.0088074 8.9137e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.018343 0.740535 insignificant 1 insignificant 0.456154 0.731595 -0.275148 6 0.510397 0.711827 -0.2014299 9.9990e-01 1.3862e-05 hypomethylated 1.0000e+00 0.0019803 hypomethylated 9.9996e-01 0.0030845 weaklyHypometh 1.0000e+00 0.55642 insignificant -0.2024017 6.2594e-03 weaklyHypometh 0.782423 insignificant chr3 46883720 46884720 33024 MYL3 ENSG00000160808 0.80496 192 8 0.644481 87 4 0.67375 95 4 0.889111 131 3 0.91071 52 6 0.81716 162 8 0.861465 90 6 0.79951 51 2 0.787500 77 5 0.91575 73 6 0.82587 110 6 0.89312 72 6 0.821107 86 6 0.800000 5 1 0.882104 74 6 0.78680 41 3 0.848788 57 3 0.458153 132 3 0.867117 112 7 0.874679 157 6 0.763371 119 6 0.774510 42 2 0.86102 85 6 0.85599 67 6 0.71693 34 2 0.913283 116 5 0.804155 88 5 0.744228 59 4 0.79899 70 3 0.74348 107 7 0.85622 95 4 0.85375 207 7 0.034503 136 6 0.060185 89 4 0.05000 123 6 0.036839 222 8 0.11111 55 3 0.081755 197 7 0.906436 191 5 0.88394 177 8 0.79414 104 5 0.871203 176 7 0.758786 127 4 0.905994 0.657713 0.73037 0.82365 0.925789 0.82732 0.78809 0.790221 0.856831 0.88717 0.79773 0.868918 0.803268 NA 0.889774 0.86511 0.789286 0.709214 0.898583 0.888158 0.797676 0.821990 0.883475 0.93891 0.79144 0.884208 0.77377 0.833472 0.85342 0.850261 0.895521 0.90003 0.056916 0.026001 0.0026593 0.11205 0.21705 0.040242 0.893338 0.88358 0.881110 0.863006 0.829404 2 0.81985 0.841621 -0.02476017 6 0.80934 0.81357 -0.00423410 0.1099951 5.5558e-02 insignificant 1.00000 1.0000e+00 insignificant 0.1859956 0.32083971 insignificant 1 1.000000 insignificant 0.00094594 0.9749384 lowCoverage 1 lowCoverage 0.81985 0.036541 0.7740346 6 0.80934 0.079408 0.7299279 2.6780e-69 1.0000e+00 hypermethylated 8.9267e-67 1.0000e+00 hypermethylated 2.1581e-17 1.00000000 hypermethylated 7.1935e-15 1.000000 hypermethylated 0.7457075 1.1107e-19 lowCoverage 1.1107e-16 lowCoverage 0.81985 0.840674 -0.02982088 5 0.80934 0.862896 -0.0535599 8.1063e-01 9.2771e-03 weaklyHypometh 1.0000e+00 8.6070e-01 insignificant 5.3317e-01 7.8048e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0347963 3.7019e-01 lowCoverage 1.00000000 lowCoverage 0.841912 0.036496 0.790943 6 0.83052 0.072189 0.7583291 2.7652e-58 1.00000000 hypermethylated 9.2173e-56 1.00000 hypermethylated 3.2376e-15 1.000000 hypermethylated 8.0939e-13 1 hypermethylated 0.7447615 1.4551e-16 lowCoverage 1.4551e-13 lowCoverage 0.84191 0.841085 -0.00137796 5 0.83052 0.875360 -0.0448417 6.6558e-01 7.4112e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3209e-01 3.8855e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03574227 3.1657e-01 lowCoverage 1.00000000 lowCoverage 0.036496 0.841085 -0.8065052 6 0.072189 0.875360 -0.8031707 1.0000e+00 5.5012e-46 hypomethylated 1.0000e+00 5.5012e-43 hypomethylated 1.0000e+00 5.4509e-12 hypomethylated 1.00000000 1.8170e-09 hypomethylated -0.7805038 7.3435e-07 hypomethylated 0.00073435 hypomethylated chr3 46884131 46885131 33025 MYL3 ENSG00000160808 0.90657 118 6 0.743307 124 6 0.77534 120 6 0.955840 45 2 0.94153 72 7 0.77335 116 7 0.851863 115 8 0.66330 66 2 0.851720 101 6 0.88713 99 8 0.87060 175 9 0.94484 83 6 0.891055 116 9 NA 0 0 0.875651 81 6 0.81606 70 4 0.915993 86 4 0.541667 50 2 0.925836 129 9 0.900600 137 6 0.851507 151 9 0.847794 37 2 0.87249 76 7 0.86868 106 8 0.75397 18 1 0.884576 110 6 0.856209 90 5 0.808171 76 4 0.87138 79 3 0.91754 129 8 0.82394 112 6 0.86819 195 6 0.184730 169 8 0.350538 115 7 0.24038 101 6 0.118326 93 6 0.41778 79 6 0.223147 137 9 0.907468 85 4 0.88004 117 6 0.78175 55 4 0.881226 122 6 0.807407 75 3 0.899711 0.780295 0.75968 0.82580 0.929181 0.81583 0.75548 0.810630 0.844423 0.87415 0.79800 0.910639 0.819120 NA 0.811170 0.82641 0.826984 0.688492 0.916704 0.903383 0.827581 0.848319 0.881888 0.90977 0.83277 0.902608 0.74869 0.829507 0.86320 0.898847 0.889155 0.89259 0.150533 0.194369 0.1475607 0.21723 0.39937 0.225724 0.938875 0.87142 0.847647 0.917368 0.868078 2 0.84761 0.860051 -0.01962723 7 0.86116 0.85547 0.00569219 0.0985881 2.1294e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1525845 0.32741197 insignificant 1 1.000000 insignificant -0.00823538 0.7636698 insignificant 1 insignificant 0.84761 0.272334 0.5808050 7 0.86116 0.273207 0.5879515 1.6369e-59 1.0000e+00 hypermethylated 4.0923e-57 1.0000e+00 hypermethylated 7.7708e-17 0.99999991 hypermethylated 1.9427e-14 1.000000 hypermethylated 0.5879846 2.4850e-06 hypermethylated 4.1417e-04 hypermethylated 0.84543 0.876652 -0.04513332 5 0.85750 0.891993 -0.0344970 7.2669e-01 3.2515e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.8119e-01 4.8845e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0077759 8.2380e-01 lowCoverage 1.00000000 lowCoverage 0.860051 0.272334 0.606703 7 0.85547 0.273207 0.5822593 4.1913e-48 1.00000000 hypermethylated 1.0478e-45 1.00000 hypermethylated 6.6015e-16 1.000000 hypermethylated 2.2005e-13 1 hypermethylated 0.5962200 1.9501e-05 hypermethylated 2.4377e-03 hypermethylated 0.85940 0.876652 -0.02193545 5 0.85296 0.891993 -0.0390362 8.0642e-01 1.4839e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.1193e-01 1.0178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00045944 9.8694e-01 lowCoverage 1.00000000 lowCoverage 0.251908 0.876652 -0.7013786 5 0.235187 0.891993 -0.6568061 1.0000e+00 2.4978e-32 hypomethylated 1.0000e+00 1.2489e-29 hypomethylated 1.0000e+00 3.6823e-09 hypomethylated 1.00000000 9.2056e-07 hypomethylated -0.5957605 4.3209e-06 lowCoverage 0.00144030 lowCoverage chr3 47003967 47004967 33037 NBEAL2 ENSG00000160796 0.69614 181 8 0.233043 249 8 0.47970 309 8 0.690537 102 6 0.42527 170 8 0.43891 207 8 0.409745 338 8 0.39797 232 8 0.397449 292 8 0.50422 236 8 0.51728 327 8 0.44629 188 8 0.368164 252 8 0.645455 92 4 0.539551 241 8 0.31189 188 8 0.265527 112 5 0.525692 131 7 0.288175 288 8 0.392381 190 8 0.551513 157 8 0.685144 86 7 0.53958 208 8 0.47491 188 8 0.40476 77 4 0.427276 262 8 0.430031 198 8 0.405060 115 8 0.46502 213 8 0.44205 272 8 0.42536 262 8 0.36727 254 8 0.189321 197 8 0.508500 259 8 0.57121 159 5 0.264620 72 5 0.56428 208 8 0.207401 315 8 0.653157 201 8 0.70738 196 8 0.66598 77 6 0.618429 151 8 0.745842 123 4 0.750130 0.315295 0.50571 0.65977 0.453706 0.44184 0.45574 0.485191 0.443530 0.58829 0.54339 0.489584 0.428502 0.508295 0.636706 0.31726 0.447026 0.615814 0.288768 0.447943 0.640446 0.582072 0.626251 0.51659 0.42502 0.430979 0.44395 0.441796 0.52514 0.467388 0.456890 0.42001 0.158516 0.456098 0.6592228 0.21690 0.61019 0.250433 0.731266 0.70000 0.678047 0.617762 0.731224 6 0.45072 0.490838 -0.01759913 8 0.43003 0.45866 -0.02862765 0.8331384 6.2989e-02 insignificant 1.00000 1.0000e+00 insignificant 0.4396773 0.28883612 insignificant 1 1.000000 insignificant -0.01949381 0.6159490 insignificant 1 insignificant 0.45072 0.403306 0.0584899 8 0.43003 0.399794 0.0302349 3.8811e-02 3.7062e-01 weaklyHypermeth 5.3166e-01 1.0000e+00 insignificant 2.3655e-02 0.86714913 weaklyHypermeth 3.8154e-01 1.000000 insignificant 0.0644470 4.4836e-01 insignificant 1.0000e+00 insignificant 0.45072 0.680481 -0.21858754 8 0.43003 0.676286 -0.2462577 1.0000e+00 4.1976e-14 hypomethylated 1.0000e+00 4.1976e-11 hypomethylated 1.0000e+00 2.0049e-09 hypomethylated 1.0000e+00 2.0049e-06 hypomethylated -0.2294869 5.9598e-06 hypomethylated 0.00119196 hypomethylated 0.490838 0.403306 0.088197 8 0.45866 0.399794 0.0588625 1.0668e-02 0.64929937 weaklyHypermeth 1.6164e-01 1.00000 insignificant 2.4483e-02 0.976213 weaklyHypermeth 4.0805e-01 1 insignificant 0.0839409 3.2548e-01 insignificant 1.0000e+00 insignificant 0.49084 0.680481 -0.21105551 8 0.45866 0.676286 -0.2176300 1.0000e+00 4.5384e-13 hypomethylated 1.0000e+00 4.5384e-10 hypomethylated 9.9999e-01 1.7327e-08 hypomethylated 1.0000e+00 1.7327e-05 hypomethylated -0.20999311 2.7730e-05 hypomethylated 0.00924321 hypomethylated 0.403306 0.680481 -0.3030795 8 0.399794 0.676286 -0.2764925 1.0000e+00 7.5579e-06 hypomethylated 1.0000e+00 3.5990e-04 hypomethylated 1.0000e+00 3.9813e-04 hypomethylated 1.00000000 3.0625e-02 hypomethylated -0.2939340 9.5435e-03 weaklyHypometh 0.37453803 insignificant chr3 47096987 47097987 33039 NBEAL2 ENSG00000160796 0.97808 64 6 0.939603 294 6 0.96520 248 6 1.000000 28 2 0.97294 187 6 1.00000 63 7 0.936702 251 6 0.97247 194 6 0.936082 174 6 0.96888 241 6 0.92523 293 7 0.95354 128 6 0.977189 215 6 NA 0 0 0.979506 228 6 0.87543 54 6 0.884978 93 6 1.000000 4 0 0.975842 259 6 0.975724 66 6 0.811039 46 6 1.000000 8 0 0.96123 219 6 0.83980 60 6 0.91667 8 0 0.968714 413 6 0.972222 32 4 0.972222 28 3 0.95299 372 6 0.96180 301 7 0.97170 288 6 0.93117 86 6 0.975134 353 6 0.976034 131 6 0.96111 140 4 1.000000 1 0 0.97114 101 6 0.989587 276 6 0.928571 28 2 0.97986 91 7 0.92857 14 0 1.000000 6 0 1.000000 17 0 0.973011 0.920412 0.95954 1.00000 0.965152 1.00000 0.94231 0.960479 0.932077 0.96142 0.93804 0.953554 0.978015 NA 0.973425 0.86731 0.882031 0.989830 0.975734 0.971405 0.809416 0.985494 0.963804 0.81339 0.87500 0.960097 0.97917 0.979167 0.95222 0.952335 0.968092 0.90227 0.976822 0.971217 0.9651727 NA 0.97475 0.985454 0.916667 0.97361 1.000000 1.000000 1.000000 0 0.95201 0.948415 0.00370927 6 0.95493 0.95570 -0.00077537 0.6443766 6.8643e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8425141 0.66157949 insignificant 1 1.000000 insignificant 0.02051474 0.2797916 lowCoverage 1 lowCoverage 0.95201 0.973054 -0.0225827 6 0.95493 0.974978 -0.0200498 8.9569e-01 1.1524e-03 weaklyHypometh 1.0000e+00 1.9207e-01 insignificant 9.8545e-01 0.01627305 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0200235 5.4679e-02 lowCoverage 1.0000e+00 lowCoverage 0.95201 0.967742 -0.01678986 2 0.95493 0.965314 -0.0103858 8.4574e-01 2.4502e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9546e-01 1.1873e-03 lowCoverage 1.0000e+00 2.9683e-01 lowCoverage -0.0085900 6.5265e-01 lowCoverage 1.00000000 lowCoverage 0.948415 0.973054 -0.026274 6 0.95570 0.974978 -0.0192744 9.5920e-01 0.11633281 insignificant 1.0000e+00 1.00000 insignificant 9.9139e-01 0.108957 insignificant 1.0000e+00 1 insignificant -0.0405383 3.6351e-02 lowCoverage 7.8253e-01 lowCoverage 0.94841 0.967742 -0.01810971 2 0.95570 0.965314 -0.0096104 8.3694e-01 2.5103e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8633e-01 5.8818e-03 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02910470 2.3307e-01 lowCoverage 1.00000000 lowCoverage 0.973054 0.967742 0.0091357 2 0.974978 0.965314 0.0096640 6.0616e-01 4.7190e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6494e-01 2.5323e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.0114335 5.3644e-01 lowCoverage 1.00000000 lowCoverage chr3 47558690 47559690 33043 C3orf75 ENSG00000163832 0.70701 454 11 0.797127 278 13 0.47275 255 14 0.889703 320 10 0.60059 143 7 0.85334 526 12 0.739634 187 7 0.78874 246 13 0.458315 160 7 0.92978 157 9 0.87823 386 16 0.84128 116 7 0.807066 244 14 0.616930 93 7 0.676095 213 8 0.74166 87 6 0.742754 150 5 0.603805 526 14 0.795256 425 14 0.815247 506 11 0.887196 130 9 0.699818 168 10 0.73253 260 8 0.92025 162 7 0.89071 95 9 0.826032 554 16 0.664294 246 11 0.748437 121 7 0.78256 428 13 0.88914 527 16 0.80263 492 14 0.91716 491 11 0.106414 460 16 0.064004 351 13 0.10357 571 14 0.560487 94 6 0.15173 343 13 0.369103 783 16 0.699015 514 11 0.59227 542 12 0.69992 398 11 0.577126 428 13 0.559098 415 12 0.858760 0.873295 0.72065 0.89169 0.801774 0.89153 0.90044 0.811826 0.877751 0.91420 0.91699 0.874279 0.924876 0.871812 0.831811 0.80621 0.760817 0.755375 0.805226 0.916959 0.899571 0.862655 0.895385 0.92903 0.92310 0.896973 0.82165 0.789423 0.74255 0.898412 0.897349 0.92812 0.240824 0.102219 0.3351117 0.64845 0.34874 0.601462 0.777401 0.83617 0.855101 0.832748 0.773391 6 0.81700 0.847850 -0.03811094 13 0.66822 0.73010 -0.06188297 0.9993223 9.3350e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9997939 0.03238470 weaklyHypometh 1 1.000000 insignificant -0.07563016 0.0619718 insignificant 1 insignificant 0.81723 0.180246 0.5653482 13 0.67756 0.224428 0.4531349 5.3800e-77 1.0000e+00 hypermethylated 2.6900e-74 1.0000e+00 hypermethylated 5.3217e-20 1.00000000 hypermethylated 2.6608e-17 1.000000 hypermethylated 0.5118811 7.6946e-04 hypermethylated 4.8092e-02 hypermethylated 0.81670 0.686112 0.07422606 11 0.63481 0.574867 0.0599397 1.7854e-05 9.9988e-01 weaklyHypermeth 8.1154e-04 1.0000e+00 weaklyHypermeth 9.5214e-04 9.9980e-01 weaklyHypermeth 4.5340e-02 1.0000e+00 weaklyHypermeth 0.1122791 2.0813e-02 weaklyHypermeth 0.77086604 insignificant 0.848799 0.180246 0.614488 14 0.74288 0.224428 0.5184559 2.2473e-77 1.00000000 hypermethylated 1.1237e-74 1.00000 hypermethylated 5.4845e-22 1.000000 hypermethylated 2.7422e-19 1 hypermethylated 0.5875113 4.2079e-04 hypermethylated 3.2368e-02 hypermethylated 0.84785 0.686411 0.12458919 12 0.73010 0.605123 0.1249774 2.8262e-14 9.9999e-01 weaklyHypermeth 3.5328e-12 1.0000e+00 weaklyHypermeth 1.1506e-07 1.0000e+00 weaklyHypermeth 2.8765e-05 1.0000e+00 weaklyHypermeth 0.18790927 8.8460e-04 weaklyHypermeth 0.08041831 weaklyHypermeth 0.180246 0.686275 -0.4372957 12 0.224428 0.583186 -0.3587575 1.0000e+00 1.8167e-29 hypomethylated 1.0000e+00 4.5418e-27 hypomethylated 1.0000e+00 1.2754e-12 hypomethylated 1.00000000 6.3771e-10 hypomethylated -0.3996020 2.9712e-03 weaklyHypometh 0.18570301 insignificant chr3 47558817 47559817 33044 C3orf75 ENSG00000163832 0.70701 454 11 0.797127 278 13 0.47275 255 14 0.889703 320 10 0.60059 143 7 0.85334 526 12 0.739634 187 7 0.78874 246 13 0.458315 160 7 0.92978 157 9 0.87823 386 16 0.84128 116 7 0.807066 244 14 0.616930 93 7 0.676095 213 8 0.74166 87 6 0.742754 150 5 0.603805 526 14 0.795256 425 14 0.815247 506 11 0.887196 130 9 0.699818 168 10 0.73253 260 8 0.92025 162 7 0.89071 95 9 0.826032 554 16 0.664294 246 11 0.748437 121 7 0.78256 428 13 0.88914 527 16 0.80263 492 14 0.91716 491 11 0.106414 460 16 0.064004 351 13 0.10357 571 14 0.560487 94 6 0.15173 343 13 0.369103 783 16 0.699015 514 11 0.59227 542 12 0.69992 398 11 0.577126 428 13 0.559098 415 12 0.858760 0.873295 0.72065 0.89169 0.801774 0.89153 0.90044 0.811826 0.877751 0.91420 0.91699 0.874279 0.924876 0.871812 0.831811 0.80621 0.760817 0.755375 0.805226 0.916959 0.899571 0.862655 0.895385 0.92903 0.92310 0.896973 0.82165 0.789423 0.74255 0.898412 0.897349 0.92812 0.240824 0.102219 0.3351117 0.64845 0.34874 0.601462 0.777401 0.83617 0.855101 0.832748 0.773391 6 0.81700 0.847850 -0.03811094 13 0.66822 0.73010 -0.06188297 0.9993223 9.3350e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9997939 0.03238470 weaklyHypometh 1 1.000000 insignificant -0.07563016 0.0619718 insignificant 1 insignificant 0.81723 0.180246 0.5653482 13 0.67756 0.224428 0.4531349 5.3800e-77 1.0000e+00 hypermethylated 2.6900e-74 1.0000e+00 hypermethylated 5.3217e-20 1.00000000 hypermethylated 2.6608e-17 1.000000 hypermethylated 0.5118811 7.6946e-04 hypermethylated 4.8092e-02 hypermethylated 0.81670 0.686112 0.07422606 11 0.63481 0.574867 0.0599397 1.7854e-05 9.9988e-01 weaklyHypermeth 8.1154e-04 1.0000e+00 weaklyHypermeth 9.5214e-04 9.9980e-01 weaklyHypermeth 4.5340e-02 1.0000e+00 weaklyHypermeth 0.1122791 2.0813e-02 weaklyHypermeth 0.77086604 insignificant 0.848799 0.180246 0.614488 14 0.74288 0.224428 0.5184559 2.2473e-77 1.00000000 hypermethylated 1.1237e-74 1.00000 hypermethylated 5.4845e-22 1.000000 hypermethylated 2.7422e-19 1 hypermethylated 0.5875113 4.2079e-04 hypermethylated 3.2368e-02 hypermethylated 0.84785 0.686411 0.12458919 12 0.73010 0.605123 0.1249774 2.8262e-14 9.9999e-01 weaklyHypermeth 3.5328e-12 1.0000e+00 weaklyHypermeth 1.1506e-07 1.0000e+00 weaklyHypermeth 2.8765e-05 1.0000e+00 weaklyHypermeth 0.18790927 8.8460e-04 weaklyHypermeth 0.08041831 weaklyHypermeth 0.180246 0.686275 -0.4372957 12 0.224428 0.583186 -0.3587575 1.0000e+00 1.8167e-29 hypomethylated 1.0000e+00 4.5418e-27 hypomethylated 1.0000e+00 1.2754e-12 hypomethylated 1.00000000 6.3771e-10 hypomethylated -0.3996020 2.9712e-03 weaklyHypometh 0.18570301 insignificant chr3 48441236 48442236 33066 PLXNB1 ENSG00000164050 0.74896 77 4 0.768414 89 7 0.74489 101 7 0.744917 87 6 0.76952 73 3 0.84318 85 6 0.751716 101 5 0.78365 78 6 0.865604 100 7 0.87009 100 7 0.83096 214 7 0.77442 86 3 0.797664 147 7 NA 0 0 0.888095 73 5 0.89901 111 5 0.664040 72 3 0.767619 95 5 0.851178 135 8 0.814219 102 8 0.869643 98 7 0.563290 83 5 0.57380 76 6 0.76514 59 6 0.86429 34 3 0.805882 140 8 0.806652 82 7 0.654762 43 3 0.87186 73 4 0.82779 129 8 0.84774 137 8 0.83722 171 7 0.517032 125 7 0.445861 160 7 0.15000 70 4 0.668523 87 4 0.56703 71 5 0.639715 147 8 0.521131 60 5 0.50563 187 8 0.59050 50 2 0.592036 84 5 0.702455 83 6 0.737963 0.767559 0.74038 0.73674 0.777222 0.81591 0.76324 0.809475 0.846244 0.88343 0.83028 0.773603 0.820191 NA 0.860185 0.84408 0.701679 0.737937 0.851503 0.771232 0.898295 0.580371 0.656705 0.77149 0.86111 0.814081 0.84707 0.638889 0.81852 0.850553 0.859098 0.83246 0.606429 0.501861 0.3949498 0.71970 0.63165 0.676885 0.492460 0.47159 0.540157 0.458694 0.654971 0 0.79210 0.800000 0.00271176 7 0.82359 0.80459 0.01899758 0.0785874 7.4187e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7873810 0.52466493 insignificant 1 1.000000 insignificant 0.02484464 0.4935488 insignificant 1 insignificant 0.79210 0.496970 0.3363827 7 0.82359 0.521022 0.3025658 1.1831e-26 9.9895e-01 hypermethylated 1.1831e-24 1.0000e+00 hypermethylated 1.7808e-06 0.99577413 hypermethylated 9.8935e-05 1.000000 hypermethylated 0.3008227 1.0715e-02 weaklyHypermeth 3.6948e-01 insignificant 0.79210 0.502155 0.28817052 6 0.82359 0.542946 0.2806420 2.4265e-24 1.0000e+00 hypermethylated 6.0662e-22 1.0000e+00 hypermethylated 7.6493e-09 9.9999e-01 hypermethylated 1.5299e-06 1.0000e+00 hypermethylated 0.2165006 1.7485e-03 weaklyHypermeth 0.12489602 insignificant 0.800000 0.496970 0.287733 8 0.80459 0.521022 0.2835683 2.2924e-14 0.99643158 hypermethylated 1.3485e-12 1.00000 hypermethylated 4.8923e-05 0.995943 hypermethylated 2.2238e-03 1 hypermethylated 0.2759780 1.3561e-02 weaklyHypermeth 4.1093e-01 insignificant 0.80000 0.502155 0.28081104 7 0.80459 0.542946 0.2616444 2.1902e-11 1.0000e+00 hypermethylated 1.9911e-09 1.0000e+00 hypermethylated 6.2297e-06 9.9798e-01 hypermethylated 4.1532e-04 1.0000e+00 hypermethylated 0.19165598 2.0106e-03 weaklyHypermeth 0.15466008 insignificant 0.496970 0.502155 0.0125330 7 0.521022 0.542946 -0.0219238 1.1944e-01 4.7552e-03 inconclusive 1.0000e+00 1.0117e-01 insignificant 6.4564e-02 1.2136e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0843220 3.5233e-01 insignificant 1.00000000 insignificant chr3 48441412 48442412 33067 PLXNB1 ENSG00000164050 0.74896 77 4 0.768414 89 7 0.74489 101 7 0.744917 87 6 0.76952 73 3 0.84318 85 6 0.751716 101 5 0.78365 78 6 0.865604 100 7 0.87009 100 7 0.83096 214 7 0.77442 86 3 0.797664 147 7 NA 0 0 0.888095 73 5 0.89901 111 5 0.664040 72 3 0.767619 95 5 0.851178 135 8 0.814219 102 8 0.869643 98 7 0.563290 83 5 0.57380 76 6 0.76514 59 6 0.86429 34 3 0.805882 140 8 0.806652 82 7 0.654762 43 3 0.87186 73 4 0.82779 129 8 0.84774 137 8 0.83722 171 7 0.517032 125 7 0.445861 160 7 0.15000 70 4 0.668523 87 4 0.56703 71 5 0.639715 147 8 0.521131 60 5 0.50563 187 8 0.59050 50 2 0.592036 84 5 0.702455 83 6 0.737963 0.767559 0.74038 0.73674 0.777222 0.81591 0.76324 0.809475 0.846244 0.88343 0.83028 0.773603 0.820191 NA 0.860185 0.84408 0.701679 0.737937 0.851503 0.771232 0.898295 0.580371 0.656705 0.77149 0.86111 0.814081 0.84707 0.638889 0.81852 0.850553 0.859098 0.83246 0.606429 0.501861 0.3949498 0.71970 0.63165 0.676885 0.492460 0.47159 0.540157 0.458694 0.654971 0 0.79210 0.800000 0.00271176 7 0.82359 0.80459 0.01899758 0.0785874 7.4187e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7873810 0.52466493 insignificant 1 1.000000 insignificant 0.02484464 0.4935488 insignificant 1 insignificant 0.79210 0.496970 0.3363827 7 0.82359 0.521022 0.3025658 1.1831e-26 9.9895e-01 hypermethylated 1.1831e-24 1.0000e+00 hypermethylated 1.7808e-06 0.99577413 hypermethylated 9.8935e-05 1.000000 hypermethylated 0.3008227 1.0715e-02 weaklyHypermeth 3.6948e-01 insignificant 0.79210 0.502155 0.28817052 6 0.82359 0.542946 0.2806420 2.4265e-24 1.0000e+00 hypermethylated 6.0662e-22 1.0000e+00 hypermethylated 7.6493e-09 9.9999e-01 hypermethylated 1.5299e-06 1.0000e+00 hypermethylated 0.2165006 1.7485e-03 weaklyHypermeth 0.12489602 insignificant 0.800000 0.496970 0.287733 8 0.80459 0.521022 0.2835683 2.2924e-14 0.99643158 hypermethylated 1.3485e-12 1.00000 hypermethylated 4.8923e-05 0.995943 hypermethylated 2.2238e-03 1 hypermethylated 0.2759780 1.3561e-02 weaklyHypermeth 4.1093e-01 insignificant 0.80000 0.502155 0.28081104 7 0.80459 0.542946 0.2616444 2.1902e-11 1.0000e+00 hypermethylated 1.9911e-09 1.0000e+00 hypermethylated 6.2297e-06 9.9798e-01 hypermethylated 4.1532e-04 1.0000e+00 hypermethylated 0.19165598 2.0106e-03 weaklyHypermeth 0.15466008 insignificant 0.496970 0.502155 0.0125330 7 0.521022 0.542946 -0.0219238 1.1944e-01 4.7552e-03 inconclusive 1.0000e+00 1.0117e-01 insignificant 6.4564e-02 1.2136e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0843220 3.5233e-01 insignificant 1.00000000 insignificant chr3 48442615 48443615 33068 PLXNB1 ENSG00000164050 0.92085 83 5 0.611772 64 6 0.60717 59 6 0.582504 73 4 0.64792 64 6 0.87766 166 4 0.790056 49 4 0.91087 55 6 0.805632 54 6 0.93365 67 6 0.80088 136 6 0.87692 29 2 0.929293 87 6 0.900000 20 2 0.873249 49 3 0.71429 14 1 0.571429 14 2 0.663333 166 4 0.894890 99 6 0.751268 96 4 0.918182 62 6 1.000000 11 2 0.83849 82 5 0.89583 46 4 0.75000 17 2 0.779012 81 6 0.785820 75 6 0.638393 28 2 0.67072 70 6 0.93056 73 5 0.85771 73 5 0.94415 154 6 0.135716 105 6 0.096170 168 6 0.25417 71 5 0.000000 16 2 0.30971 93 5 0.231715 174 6 0.603050 86 5 0.53228 102 5 0.79456 82 4 0.737374 109 4 0.460000 70 5 0.925872 0.409112 0.76796 0.83934 0.796875 0.89296 0.69669 0.906488 0.930236 0.95025 0.79182 0.934024 0.977564 0.867633 0.914997 0.95055 0.822337 0.615385 0.893485 0.800434 0.806818 0.982330 0.854853 0.83173 0.88357 0.738678 0.87546 0.804945 0.62896 0.967949 0.859432 0.96318 0.033740 0.032925 0.1554487 0.00000 0.16346 0.069991 0.794482 0.54599 0.658600 0.782343 0.573184 0 0.81717 0.852140 -0.04213977 6 0.69418 0.78091 -0.08672654 0.9823275 6.7904e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9607534 0.10822949 insignificant 1 1.000000 insignificant -0.05089112 0.2506229 lowCoverage 1 lowCoverage 0.81888 0.196172 0.6816711 6 0.80988 0.189126 0.6207518 4.5473e-42 1.0000e+00 hypermethylated 9.0946e-40 1.0000e+00 hypermethylated 3.2475e-13 1.00000000 hypermethylated 6.4950e-11 1.000000 hypermethylated 0.6119358 1.2750e-06 lowCoverage 2.5501e-04 lowCoverage 0.81888 0.668151 0.16731702 4 0.80988 0.606649 0.2032287 3.6946e-07 1.0000e+00 lowCoverage 2.1733e-05 1.0000e+00 lowCoverage 1.9896e-04 9.9999e-01 lowCoverage 1.2435e-02 1.0000e+00 lowCoverage 0.1577291 6.2547e-02 lowCoverage 1.00000000 lowCoverage 0.854167 0.196172 0.674173 6 0.85550 0.189126 0.6663772 1.2144e-34 1.00000000 hypermethylated 2.4288e-32 1.00000 hypermethylated 1.3903e-12 1.000000 hypermethylated 2.7806e-10 1 hypermethylated 0.6628270 4.3872e-07 lowCoverage 1.1088e-04 lowCoverage 0.85417 0.668151 0.21443938 4 0.85550 0.606649 0.2488541 2.4238e-08 1.0000e+00 lowCoverage 1.5149e-06 1.0000e+00 lowCoverage 6.3888e-05 1.0000e+00 lowCoverage 3.3625e-03 1.0000e+00 lowCoverage 0.20862018 2.3605e-02 lowCoverage 0.82762721 lowCoverage 0.196172 0.668151 -0.4962249 4 0.189126 0.606649 -0.4175230 1.0000e+00 1.1575e-12 lowCoverage 1.0000e+00 1.9291e-10 lowCoverage 1.0000e+00 1.2467e-05 lowCoverage 1.00000000 1.7647e-03 lowCoverage -0.4542068 4.3194e-04 lowCoverage 0.04799385 lowCoverage chr3 49129140 49130140 33079 QARS ENSG00000172053 0.90745 424 13 0.889040 346 12 0.93169 458 12 0.932696 502 12 0.93839 285 12 0.94155 584 13 0.904742 560 12 0.92792 380 12 0.952091 366 12 0.94879 361 11 0.90715 466 12 0.84816 420 11 0.957558 358 12 0.900000 57 5 0.929227 433 12 0.86169 325 11 0.934400 240 11 0.951687 566 11 0.968161 384 13 0.941366 467 13 0.926926 178 12 0.966755 165 8 0.94998 448 13 0.89176 237 11 0.91448 286 8 0.943276 547 13 0.938327 259 12 0.903757 244 12 0.92212 395 12 0.96210 486 13 0.96778 529 13 0.94071 633 13 0.892762 332 12 0.874552 410 12 0.78828 349 10 0.916911 220 13 0.87990 273 12 0.938374 505 13 0.948542 585 13 0.97290 607 13 0.98559 441 10 0.973949 565 12 0.938940 494 12 0.934728 0.871117 0.93277 0.94998 0.930923 0.93871 0.89472 0.913362 0.956394 0.96123 0.91110 0.872818 0.967963 0.924915 0.918047 0.85882 0.918927 0.951983 0.959399 0.929280 0.926579 0.953828 0.972233 0.87676 0.92818 0.942750 0.93117 0.924176 0.90960 0.967117 0.966367 0.93745 0.885892 0.859372 0.8143344 0.90178 0.86054 0.934794 0.954126 0.97492 0.978132 0.962597 0.955956 8 0.93448 0.939641 -0.00753377 12 0.93212 0.93835 -0.00623460 0.9859714 2.2263e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9987175 0.05374223 insignificant 1 1.000000 insignificant -0.01197639 0.2402628 insignificant 1 insignificant 0.93444 0.910005 0.0247910 12 0.92690 0.894666 0.0322322 1.9522e-02 4.0855e-02 weaklyHypermeth 2.8709e-01 1.0000e+00 insignificant 2.5007e-01 0.07076638 insignificant 1.0000e+00 1.000000 insignificant 0.0418918 1.0739e-01 insignificant 1.0000e+00 insignificant 0.93448 0.960996 -0.03313481 12 0.93212 0.962573 -0.0304538 1.0000e+00 2.2571e-04 weaklyHypometh 1.0000e+00 5.6429e-02 weaklyHypometh 1.0000e+00 2.2159e-05 weaklyHypometh 1.0000e+00 1.1080e-02 weaklyHypometh -0.0402953 4.7782e-03 weaklyHypometh 0.31854861 insignificant 0.939600 0.910005 0.032937 12 0.93361 0.894666 0.0389464 1.2467e-01 0.41214938 insignificant 1.0000e+00 1.00000 insignificant 2.0235e-01 0.717132 insignificant 1.0000e+00 1 insignificant 0.0538682 5.0824e-02 insignificant 9.2407e-01 insignificant 0.93964 0.960996 -0.02600847 12 0.93835 0.962573 -0.0242192 9.9995e-01 2.6513e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9945e-01 6.7331e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02831891 3.1162e-02 weaklyHypometh 0.89033280 insignificant 0.910005 0.960967 -0.0613818 13 0.894666 0.959694 -0.0650286 9.6453e-01 3.4316e-02 weaklyHypometh 1.0000e+00 5.7194e-01 insignificant 9.8616e-01 2.0126e-02 weaklyHypometh 1.00000000 4.6806e-01 insignificant -0.0821871 9.6319e-03 weaklyHypometh 0.37453803 insignificant chr3 50173316 50174316 33116 SEMA3F ENSG00000001617 0.82292 260 7 0.771174 176 8 0.77729 181 8 0.873583 334 7 0.81186 87 8 0.78959 343 8 0.809455 117 7 0.81872 214 8 0.716210 195 8 0.84142 232 8 0.91011 235 8 0.86157 115 7 0.786021 338 8 0.831038 168 8 0.828144 211 8 0.93750 158 8 0.511905 49 3 0.742784 337 7 0.719178 158 7 0.839944 266 8 0.951190 55 1 0.749962 180 8 0.86879 181 8 0.86027 104 8 0.77788 100 7 0.779845 319 8 0.898444 122 8 0.840931 88 8 0.82502 227 7 0.87541 408 8 0.79052 261 8 0.91199 342 8 0.640696 208 8 0.459859 139 7 0.33333 62 6 0.557292 47 7 0.63753 100 8 0.534222 325 8 0.765724 275 7 0.79157 247 7 0.67150 202 7 0.602050 302 7 0.753321 285 7 0.826441 0.782709 0.79691 0.82263 0.820817 0.86582 0.82817 0.803117 0.761160 0.81663 0.87938 0.837280 0.739087 0.824149 0.772476 0.83760 0.538428 0.761685 0.665037 0.772774 0.943176 0.699401 0.854526 0.75668 0.78361 0.752299 0.83665 0.875341 0.82351 0.799126 0.738568 0.92231 0.714248 0.508935 0.2344673 0.68858 0.66842 0.528682 0.702893 0.69549 0.610478 0.573180 0.688672 6 0.82247 0.842480 -0.01418712 8 0.71418 0.87363 -0.15944862 0.9934345 7.9567e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9987624 0.06084314 insignificant 1 1.000000 insignificant -0.04416711 0.1065905 insignificant 1 insignificant 0.82263 0.569807 0.2614854 8 0.73798 0.573431 0.1645482 2.3930e-32 1.0000e+00 hypermethylated 3.9883e-30 1.0000e+00 hypermethylated 2.2384e-09 0.99995871 hypermethylated 3.1976e-07 1.000000 hypermethylated 0.2728656 1.2405e-03 weaklyHypermeth 6.2023e-02 weaklyHypermeth 0.82282 0.758200 0.11165293 7 0.83023 0.715014 0.1152128 7.2369e-08 9.9976e-01 weaklyHypermeth 4.5231e-06 1.0000e+00 weaklyHypermeth 1.5948e-04 9.9987e-01 weaklyHypermeth 1.0632e-02 1.0000e+00 weaklyHypermeth 0.0831886 7.8487e-02 insignificant 1.00000000 insignificant 0.842348 0.569807 0.275472 8 0.85959 0.573431 0.2861578 9.3693e-26 1.00000000 hypermethylated 1.3385e-23 1.00000 hypermethylated 2.4333e-09 1.000000 hypermethylated 4.0555e-07 1 hypermethylated 0.3170328 6.0444e-04 hypermethylated 4.3174e-02 hypermethylated 0.84228 0.758200 0.12810537 7 0.84204 0.715014 0.1270236 4.9091e-08 1.0000e+00 weaklyHypermeth 2.8877e-06 1.0000e+00 weaklyHypermeth 3.2855e-06 1.0000e+00 weaklyHypermeth 2.9869e-04 1.0000e+00 weaklyHypermeth 0.12735569 1.6933e-02 weaklyHypermeth 0.70553317 insignificant 0.569318 0.758200 -0.1455848 7 0.520110 0.715014 -0.1949039 9.5390e-01 3.2335e-08 weaklyHypometh 1.0000e+00 2.4873e-06 weaklyHypometh 8.9909e-01 6.2611e-05 weaklyHypometh 1.00000000 5.6919e-03 weaklyHypometh -0.1896771 1.1199e-02 weaklyHypometh 0.37453803 insignificant chr3 50178752 50179752 33120 SEMA3F ENSG00000001617 0.65382 244 4 0.526386 160 5 0.56148 99 5 0.904005 211 3 0.67063 84 5 0.90911 291 4 0.840212 128 6 0.75711 178 5 0.679798 73 5 0.66389 42 4 0.80000 215 6 0.59231 60 5 0.605460 145 5 0.894286 40 3 0.649888 104 5 0.83619 40 3 0.684127 123 4 0.487238 352 4 0.812686 150 4 0.685262 305 4 0.939236 83 4 0.441806 79 2 0.90380 136 4 0.81692 50 3 0.63716 234 3 0.575789 158 5 0.438732 67 3 0.887619 34 3 0.61125 117 4 0.61944 189 6 0.70610 196 6 0.78532 250 4 0.401608 149 6 0.452109 168 4 0.61905 158 3 0.394124 110 2 0.51547 117 5 0.351548 254 6 0.345875 204 4 0.57005 209 5 0.62002 170 3 0.577443 216 3 0.580211 170 4 0.857601 0.736063 0.64114 0.81079 0.840382 0.92507 0.89257 0.893760 0.779029 0.89735 0.88917 0.561852 0.895558 0.897202 0.858293 0.99528 0.996839 0.540741 0.859435 0.814364 0.828540 0.666863 0.914760 0.85117 0.85538 0.838816 0.76912 0.910324 0.86132 0.833791 0.840063 0.92302 0.332024 0.410477 0.9911504 0.34456 0.64031 0.378073 0.555466 0.56541 0.816882 0.622824 0.690679 2 0.78712 0.832286 -0.03387660 4 0.60563 0.66526 -0.05962282 0.7246752 2.8432e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.8906358 0.55563812 lowCoverage 1 1.000000 lowCoverage 0.01376279 0.8122217 lowCoverage 1 lowCoverage 0.78712 0.520921 0.2997313 5 0.60563 0.401425 0.2042079 6.9662e-12 9.9045e-01 hypermethylated 2.4879e-10 1.0000e+00 hypermethylated 2.0994e-03 0.99956289 weaklyHypermeth 5.1435e-02 1.000000 weaklyHypermeth 0.2550429 3.2676e-04 lowCoverage 2.7230e-02 lowCoverage 0.78930 0.658411 0.13530708 3 0.73821 0.507282 0.2309292 8.9216e-09 9.9944e-01 lowCoverage 6.3726e-07 1.0000e+00 lowCoverage 5.2542e-06 9.9857e-01 lowCoverage 4.0417e-04 1.0000e+00 lowCoverage 0.1719741 1.9011e-02 lowCoverage 0.77086604 lowCoverage 0.832286 0.520921 0.345099 4 0.66526 0.401425 0.2638307 7.5914e-09 0.99989418 lowCoverage 2.8495e-07 1.00000 lowCoverage 6.9809e-03 1.000000 lowCoverage 1.2928e-01 1 lowCoverage 0.2412801 1.6730e-03 lowCoverage 7.5824e-02 lowCoverage 0.83565 0.658411 0.17488529 3 0.76455 0.507282 0.2572681 5.5210e-08 9.9997e-01 lowCoverage 3.0672e-06 1.0000e+00 lowCoverage 5.5974e-06 9.9996e-01 lowCoverage 4.1532e-04 1.0000e+00 lowCoverage 0.15821135 4.2581e-02 lowCoverage 1.00000000 lowCoverage 0.522152 0.658411 -0.1610612 4 0.477138 0.507282 -0.0301446 3.8167e-02 5.0259e-03 lowCoverage 1.0000e+00 1.0471e-01 lowCoverage 2.2801e-01 2.9323e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0830687 2.2435e-01 lowCoverage 1.00000000 lowCoverage chr3 50180534 50181534 33122 SEMA3F ENSG00000001617 0.81488 163 6 0.814131 212 6 0.83707 251 6 0.763812 207 6 0.87643 60 5 0.84875 260 6 0.866092 109 5 0.85470 149 5 0.762412 191 5 0.90907 170 5 0.92287 128 5 0.72586 107 5 0.799630 200 5 0.825195 111 5 0.720464 142 5 0.71591 39 3 0.852381 34 3 0.747365 280 5 0.848221 105 4 0.674817 205 5 0.844675 80 5 0.402536 141 5 0.82470 159 6 0.67677 77 5 0.89909 67 4 0.861258 265 6 0.835639 107 5 0.837179 107 5 0.92115 103 5 0.76812 272 6 0.85699 239 6 0.89497 204 5 0.406850 235 6 0.838961 75 5 0.91105 172 5 1.000000 26 3 0.81228 115 5 0.722152 209 6 0.327333 187 6 0.43577 206 5 0.41315 134 4 0.461152 170 4 0.387842 149 5 0.849985 0.835029 0.86354 0.71674 0.946762 0.82717 0.86678 0.877783 0.808602 0.91860 0.91157 0.749847 0.798777 0.848902 0.759052 0.74791 0.836393 0.720368 0.832085 0.737910 0.881335 0.355569 0.815222 0.78195 0.89793 0.880494 0.86461 0.945944 0.92805 0.831340 0.892700 0.88408 0.668399 0.849765 0.8782218 1.00000 0.82702 0.645855 0.243806 0.41290 0.264873 0.566952 0.501464 4 0.81620 0.827738 -0.01659308 5 0.80199 0.81319 -0.01119224 0.8719144 4.3468e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9725713 0.09580664 insignificant 1 1.000000 insignificant 0.00708073 0.8732205 insignificant 1 insignificant 0.81620 0.762936 0.0351038 5 0.80199 0.728824 0.0731695 1.1430e-01 5.4552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8253e-01 0.18735122 insignificant 1.0000e+00 1.000000 insignificant 0.0271203 7.6332e-01 insignificant 1.0000e+00 insignificant 0.81620 0.394799 0.41984781 5 0.80199 0.417708 0.3842861 1.3082e-27 1.0000e+00 hypermethylated 6.5409e-25 1.0000e+00 hypermethylated 2.8865e-12 1.0000e+00 hypermethylated 2.8070e-09 1.0000e+00 hypermethylated 0.4039544 4.5178e-07 lowCoverage 0.00022589 lowCoverage 0.826469 0.762019 0.055233 5 0.73273 0.624706 0.1080244 1.4240e-01 0.88586136 insignificant 1.0000e+00 1.00000 insignificant 4.9458e-01 0.592847 insignificant 1.0000e+00 1 insignificant 0.0200395 8.3616e-01 insignificant 1.0000e+00 insignificant 0.82774 0.394799 0.43514433 5 0.81319 0.417708 0.3954783 2.3404e-15 1.0000e+00 hypermethylated 4.6807e-13 1.0000e+00 hypermethylated 9.1468e-10 1.0000e+00 hypermethylated 9.1468e-07 1.0000e+00 hypermethylated 0.39687371 4.2918e-07 lowCoverage 0.00042918 lowCoverage 0.762936 0.394799 0.3725032 5 0.728824 0.417708 0.3111166 5.4030e-08 9.9997e-01 hypermethylated 2.7015e-05 1.0000e+00 hypermethylated 1.4440e-06 1.0000e+00 hypermethylated 0.00086522 1.0000e+00 hypermethylated 0.3768342 5.5530e-03 lowCoverage 0.26442912 lowCoverage chr3 50181418 50182418 33123 SEMA3F ENSG00000001617 0.95483 301 7 0.828900 159 4 0.90866 140 7 0.925747 310 7 0.93257 120 7 0.93870 321 7 0.896140 191 7 0.89883 137 7 0.953811 73 4 0.98137 67 4 0.87953 226 7 0.91667 52 4 0.876190 62 4 0.861517 96 4 0.805686 122 4 0.74490 40 4 NA 0 0 0.933798 481 4 0.920167 177 4 0.936927 261 7 0.915520 97 4 0.945462 63 2 0.93657 152 7 1.00000 63 4 0.95773 269 7 0.963660 211 7 0.844015 124 7 0.938776 71 4 0.95024 148 4 0.92326 224 7 0.92139 196 7 0.91047 281 7 0.650183 140 7 0.407757 196 7 0.83019 459 7 0.526786 64 5 0.64473 135 5 0.867407 213 7 0.856412 234 4 0.94045 228 7 0.90334 266 7 0.853112 303 4 0.908089 205 7 0.911712 0.771058 0.83790 0.91498 0.851852 0.87949 0.87380 0.889658 0.917277 0.96104 0.86184 0.964286 0.900299 0.879757 0.902818 0.92177 NA 0.885965 0.873046 0.907671 0.835136 0.885966 0.880843 1.00000 0.95595 0.931949 0.78945 0.871985 0.91450 0.906514 0.888623 0.85602 0.572187 0.382942 0.6710774 0.23566 0.58918 0.840648 0.858626 0.90257 0.847788 0.881287 0.885158 4 0.88399 0.902529 -0.01340120 5 0.92285 0.93643 -0.01357435 0.9770125 2.3557e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9102496 0.12746832 insignificant 1 1.000000 insignificant -0.03419098 0.0546026 insignificant 1 insignificant 0.88396 0.652858 0.2621212 5 0.91183 0.736047 0.1757821 7.9787e-10 9.7220e-01 hypermethylated 2.2163e-08 1.0000e+00 hypermethylated 2.4670e-05 0.99385275 hypermethylated 8.8107e-04 1.000000 hypermethylated 0.2452239 1.7928e-02 weaklyHypermeth 4.9800e-01 insignificant 0.88396 0.878641 0.00012854 5 0.91183 0.913130 -0.0013008 2.8631e-01 3.3418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1489e-01 5.8206e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0074515 7.3274e-01 insignificant 1.00000000 insignificant 0.902478 0.652858 0.247257 7 0.92734 0.736047 0.1912957 2.0150e-07 0.94151394 hypermethylated 5.7573e-06 1.00000 hypermethylated 2.1754e-05 0.999093 hypermethylated 1.1450e-03 1 hypermethylated 0.2794148 1.0870e-02 weaklyHypermeth 3.6233e-01 insignificant 0.90248 0.878641 0.01380927 7 0.92734 0.913130 0.0142128 4.3321e-02 3.0774e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 9.5701e-02 6.5478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04164245 7.0565e-02 insignificant 1.00000000 insignificant 0.652858 0.878641 -0.2581977 7 0.736047 0.913130 -0.1770829 9.9771e-01 2.8881e-03 weaklyHypometh 1.0000e+00 6.5639e-02 weaklyHypometh 9.9992e-01 7.2799e-03 weaklyHypometh 1.00000000 1.9963e-01 insignificant -0.2377724 1.9895e-02 weaklyHypometh 0.53769254 insignificant chr3 50221010 50222010 33125 SLC38A3 ENSG00000188338 0.74287 237 5 0.731636 282 7 0.75724 262 7 0.858704 274 5 0.75882 100 5 0.91895 251 5 0.894747 105 5 0.80475 185 5 0.865982 154 5 0.85679 185 5 0.85227 180 7 0.82274 61 4 0.783224 200 5 0.753932 105 5 0.606829 193 5 0.85317 32 4 0.685664 47 4 0.730504 430 5 0.770236 159 5 0.808345 247 5 0.891775 94 5 0.660435 137 5 0.78175 199 7 0.78485 123 5 0.84269 354 7 0.837299 273 9 0.820445 92 4 0.875325 81 4 0.78127 195 5 0.89126 299 7 0.84101 320 9 0.91723 246 6 0.736683 307 7 0.728835 202 6 0.54326 265 7 0.673160 53 6 0.68433 97 5 0.749350 287 7 0.740072 158 5 0.69414 208 5 0.71900 163 5 0.496572 228 5 0.427561 210 6 0.785899 0.728608 0.71932 0.82659 0.780063 0.85106 0.81765 0.812869 0.817171 0.79681 0.82881 0.782126 0.803289 0.749285 0.693601 0.83432 0.695514 0.697300 0.818733 0.828617 0.844372 0.688531 0.835992 0.74166 0.76609 0.843869 0.74659 0.862608 0.71753 0.862257 0.836830 0.90848 0.628347 0.632749 0.4371331 0.62159 0.73969 0.688934 0.615104 0.70756 0.622854 0.534478 0.574920 4 0.77338 0.803320 -0.02146864 6 0.78006 0.82272 -0.04265853 0.9967873 4.2495e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9059664 0.25051168 insignificant 1 1.000000 insignificant -0.03424212 0.2041002 insignificant 1 insignificant 0.77338 0.654005 0.1337512 6 0.78006 0.683709 0.0963521 6.5100e-10 8.6776e-01 weaklyHypermeth 1.8600e-08 1.0000e+00 weaklyHypermeth 1.2958e-03 0.93191197 weaklyHypermeth 3.4101e-02 1.000000 weaklyHypermeth 0.1069336 1.5998e-02 weaklyHypermeth 4.8190e-01 insignificant 0.77338 0.584281 0.18985361 5 0.78006 0.637632 0.1424289 2.0284e-14 9.8314e-01 weaklyHypermeth 2.2537e-12 1.0000e+00 weaklyHypermeth 7.8878e-07 9.9440e-01 weaklyHypermeth 7.8878e-05 1.0000e+00 weaklyHypermeth 0.1774017 4.7976e-02 weaklyHypermeth 1.00000000 insignificant 0.803320 0.654005 0.147484 6 0.82272 0.683709 0.1390106 1.4581e-07 0.93504290 weaklyHypermeth 4.4184e-06 1.00000 weaklyHypermeth 4.6779e-03 0.986017 weaklyHypermeth 9.5467e-02 1 weaklyHypermeth 0.1411757 3.8640e-03 weaklyHypermeth 1.5456e-01 insignificant 0.80332 0.584281 0.20852729 5 0.82272 0.637632 0.1850874 3.0442e-10 9.9027e-01 hypermethylated 2.3417e-08 1.0000e+00 hypermethylated 1.8466e-06 9.9706e-01 hypermethylated 1.8466e-04 1.0000e+00 hypermethylated 0.21164381 2.6598e-02 weaklyHypermeth 0.82762721 insignificant 0.654005 0.584281 0.0583581 5 0.683709 0.637632 0.0460768 5.3601e-02 1.6602e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1271e-01 4.1979e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0704681 3.6102e-01 insignificant 1.00000000 insignificant chr3 50282564 50283564 33131 SEMA3B ENSG00000012171 0.80312 110 4 0.884288 130 3 0.74940 114 5 0.754323 131 3 0.85595 55 3 0.76233 144 5 0.800000 40 3 0.93969 143 5 0.832244 112 5 0.91684 85 3 0.92208 191 6 0.83649 34 3 0.926997 132 6 NA 0 0 0.913333 58 3 0.93333 17 3 0.891429 22 3 0.846180 161 5 0.933239 96 6 0.833174 136 6 0.878968 74 5 0.830060 69 6 0.88182 91 5 0.95000 29 3 0.93904 72 5 0.882291 256 6 0.868056 59 5 0.760000 28 3 0.96541 115 6 0.95924 294 6 0.91250 208 6 0.77429 164 6 0.527125 144 5 0.332761 122 6 0.33333 185 5 0.851852 43 3 0.70833 47 4 0.939224 223 6 0.894624 72 3 0.75436 116 5 0.79134 90 3 0.735084 122 5 0.776078 115 3 0.853937 0.848755 0.84064 0.90454 0.772386 0.87097 0.82246 0.908293 0.838097 0.86697 0.94485 0.782436 0.957962 NA 0.862465 0.92605 0.824017 0.914923 0.922987 0.849456 0.851018 0.907117 0.829403 0.91848 0.92290 0.917909 0.80042 0.898551 0.93232 0.953190 0.945573 0.91379 0.758733 0.513445 0.3260870 0.82682 0.75725 0.946415 0.924809 0.93396 0.883617 0.888319 0.926215 3 0.87807 0.904729 -0.02818410 5 0.86998 0.90045 -0.03047070 0.9745572 6.0294e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9303425 0.06492209 insignificant 1 1.000000 insignificant -0.02376399 0.3448584 lowCoverage 1 lowCoverage 0.87807 0.650524 0.2066736 5 0.86998 0.629282 0.2406948 2.1141e-07 9.5636e-01 hypermethylated 4.8291e-06 1.0000e+00 hypermethylated 2.7921e-04 0.89042116 hypermethylated 8.2121e-03 1.000000 hypermethylated 0.2442699 6.9215e-02 lowCoverage 1.0000e+00 lowCoverage 0.87807 0.883495 0.00089772 5 0.86998 0.738707 0.1312691 3.7837e-04 1.4488e-01 weaklyHypermeth 1.5766e-02 1.0000e+00 weaklyHypermeth 2.5005e-01 7.5886e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0694109 6.6291e-02 lowCoverage 1.00000000 lowCoverage 0.904729 0.650524 0.238235 5 0.90045 0.629282 0.2711655 2.0660e-06 0.99650666 hypermethylated 5.1649e-05 1.00000 hypermethylated 1.1962e-04 0.991961 hypermethylated 4.6008e-03 1 hypermethylated 0.2680339 5.2165e-02 lowCoverage 9.3152e-01 lowCoverage 0.90473 0.883495 0.02367695 5 0.90045 0.738707 0.1617398 5.0191e-04 7.4745e-01 weaklyHypermeth 2.0913e-02 1.0000e+00 weaklyHypermeth 2.4420e-01 6.9858e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.09317485 2.4784e-02 lowCoverage 0.82762721 lowCoverage 0.650524 0.883495 -0.2002886 5 0.629282 0.738707 -0.1094257 9.5940e-01 1.0489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7234e-01 2.8131e-02 weaklyHypometh 1.00000000 6.1155e-01 insignificant -0.1748591 1.6424e-01 lowCoverage 1.00000000 lowCoverage chr3 50466002 50467002 33145 ENSG00000202322 0.86276 277 12 0.639531 347 12 0.78867 263 13 0.845558 169 8 0.74814 200 12 0.77693 416 14 0.795912 311 14 0.80343 218 12 0.659502 271 11 0.69257 232 13 0.82214 401 15 0.78042 240 11 0.860588 279 12 0.552941 26 1 0.809191 268 11 0.67360 219 9 0.642735 200 11 0.821780 246 8 0.870164 276 12 0.788161 427 14 0.860615 211 12 0.573752 139 7 0.72738 341 12 0.70966 155 11 0.70964 99 7 0.736874 370 12 0.691300 215 10 0.790785 174 10 0.69789 260 12 0.78332 392 12 0.74604 346 12 0.79587 492 14 0.585191 291 12 0.509432 279 12 0.67912 287 10 0.510313 114 8 0.65892 212 12 0.718569 370 12 0.577973 371 12 0.74433 380 12 0.63953 179 8 0.744043 289 8 0.720208 249 9 0.861118 0.698961 0.66915 0.81262 0.639567 0.72881 0.79247 0.711385 0.659209 0.65482 0.76391 0.710952 0.780820 0.853196 0.757052 0.52813 0.523711 0.770352 0.819999 0.692169 0.810430 0.598032 0.771882 0.66738 0.78990 0.714419 0.70368 0.719193 0.67269 0.765042 0.738870 0.81796 0.543522 0.482444 0.6528458 0.41522 0.54116 0.611012 0.545801 0.69585 0.633409 0.756407 0.660037 6 0.75790 0.768629 -0.01059723 12 0.77972 0.70934 0.07037454 0.6418734 8.6552e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5617156 0.90439899 insignificant 1 1.000000 insignificant 0.02647441 0.3616108 insignificant 1 insignificant 0.75786 0.618802 0.1501167 12 0.76503 0.604526 0.1605035 5.8391e-22 6.3637e-01 weaklyHypermeth 4.4916e-20 1.0000e+00 weaklyHypermeth 2.5611e-09 0.81954655 weaklyHypermeth 3.2013e-07 1.000000 weaklyHypermeth 0.1514776 6.1114e-03 weaklyHypermeth 2.5464e-01 insignificant 0.75790 0.617166 0.09458396 12 0.77972 0.699097 0.0806181 3.1770e-03 3.9455e-01 weaklyHypermeth 1.0248e-01 1.0000e+00 insignificant 1.1381e-02 3.8584e-01 weaklyHypermeth 4.2153e-01 1.0000e+00 insignificant 0.0765191 8.5902e-02 insignificant 1.00000000 insignificant 0.768869 0.618802 0.151480 12 0.75663 0.604526 0.1521040 1.9109e-12 0.33148792 weaklyHypermeth 1.0057e-10 1.00000 weaklyHypermeth 6.8856e-06 0.757088 weaklyHypermeth 4.5904e-04 1 weaklyHypermeth 0.1250032 1.6474e-02 weaklyHypermeth 4.4525e-01 insignificant 0.76863 0.617166 0.09787371 12 0.70934 0.699097 0.0102436 1.9717e-02 1.3579e-01 weaklyHypermeth 5.4769e-01 1.0000e+00 insignificant 3.9527e-01 3.1174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05004472 2.3713e-01 insignificant 1.00000000 insignificant 0.618802 0.618008 -0.1103182 12 0.604526 0.745703 -0.1411775 9.9916e-01 1.6110e-05 weaklyHypometh 1.0000e+00 7.3227e-04 weaklyHypometh 9.9980e-01 4.5231e-04 weaklyHypometh 1.00000000 3.1217e-02 weaklyHypometh -0.0749584 1.6108e-01 insignificant 1.00000000 insignificant chr3 50466531 50467531 33146 ENSG00000202322 0.89843 135 8 0.672344 185 6 0.78455 142 6 0.898647 75 5 0.74346 122 6 0.80351 174 6 0.679247 137 6 0.73785 156 6 0.597713 180 6 0.65140 138 6 0.79999 229 7 0.64347 120 6 0.789796 185 6 0.691176 23 1 0.814842 166 6 0.43203 54 4 0.425950 106 6 0.844310 82 2 0.862719 176 6 0.842391 181 6 0.778802 134 6 0.676740 80 3 0.67243 163 6 0.66939 96 6 0.85189 47 3 0.844348 221 6 0.638213 137 6 0.629233 117 6 0.72500 188 6 0.82339 220 6 0.78212 226 6 0.74766 197 6 0.661346 166 6 0.650767 156 6 0.85346 174 6 0.604082 22 3 0.77150 137 6 0.768433 213 6 0.685185 122 6 0.61264 123 6 0.76082 50 3 0.738519 105 3 0.760085 79 3 0.853356 0.639980 0.64237 0.79273 0.494324 0.68588 0.68774 0.556223 0.511114 0.52987 0.70909 0.558650 0.686524 0.891021 0.672481 0.17206 0.247792 0.767373 0.786000 0.616952 0.689909 0.585528 0.743197 0.51220 0.85478 0.690545 0.61273 0.546540 0.65719 0.743221 0.726235 0.74491 0.620915 0.547322 0.7722241 0.47029 0.55285 0.664602 0.503000 0.65651 0.554627 0.721067 0.611387 3 0.72421 0.759584 -0.03401880 6 0.78763 0.71100 0.07663335 0.9864553 3.1245e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9701906 0.57044972 insignificant 1 1.000000 insignificant -0.00591044 0.8770967 insignificant 1 insignificant 0.72222 0.766129 -0.0129094 6 0.71859 0.723802 -0.0052081 8.9873e-01 4.5713e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.9164e-01 0.09486314 insignificant 1.0000e+00 1.000000 insignificant 0.0124284 8.0361e-01 insignificant 1.0000e+00 insignificant 0.72421 0.617954 0.05366317 6 0.78763 0.685821 0.1018099 4.9182e-01 1.2743e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7828e-01 1.2751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0192424 6.4824e-01 lowCoverage 1.00000000 lowCoverage 0.758943 0.766129 0.016205 6 0.73000 0.723802 0.0061948 5.3653e-01 0.00805872 inconclusive 1.0000e+00 1.00000 insignificant 3.2324e-01 0.082887 insignificant 1.0000e+00 1 insignificant 0.0183388 6.9253e-01 insignificant 1.0000e+00 insignificant 0.75958 0.617954 0.08986976 6 0.71100 0.685821 0.0251766 2.2887e-01 3.1807e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 5.0124e-01 1.5938e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02515282 5.0675e-01 lowCoverage 1.00000000 lowCoverage 0.766129 0.614191 0.0275680 6 0.723802 0.770953 -0.0471514 8.0809e-01 1.0674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6294e-01 1.3960e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0068140 8.8981e-01 lowCoverage 1.00000000 lowCoverage chr3 50487492 50488492 33152 ENSG00000202322 0.95129 463 10 0.905795 223 11 0.90889 164 10 0.930913 500 10 0.90433 103 8 0.90318 551 11 0.809606 121 10 0.95881 275 11 0.866329 164 10 0.84134 252 10 0.95393 471 11 0.98485 79 7 0.937381 249 10 0.957326 207 10 0.926970 256 10 0.94333 60 7 0.657738 21 2 0.749873 603 10 0.966647 342 10 0.926217 574 10 0.849968 141 10 0.908446 114 10 0.92464 224 11 0.98136 153 10 0.85642 165 10 0.945169 346 10 0.773642 272 10 0.737371 146 6 0.78021 346 10 0.95870 323 11 0.93654 327 11 0.90938 491 11 0.805014 299 11 0.684323 323 10 0.68449 218 5 0.893333 74 5 0.74114 218 10 0.834979 383 11 0.795331 280 10 0.89012 376 11 0.83720 308 10 0.902391 228 7 0.936923 304 10 0.932603 0.865124 0.88961 0.91735 0.937850 0.91379 0.88863 0.973319 0.930680 0.93934 0.93469 0.986595 0.919084 0.930453 0.902827 0.87918 0.820094 0.851669 0.915004 0.946520 0.819818 0.872261 0.913971 0.95716 0.93073 0.916058 0.90559 0.826134 0.91325 0.951692 0.919304 0.94744 0.810939 0.676218 0.8649672 0.79457 0.78186 0.802153 0.866765 0.87920 0.881667 0.886684 0.928368 7 0.92180 0.925476 -0.00483386 10 0.86776 0.84386 0.02389882 0.9286160 1.5817e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2702752 0.87472578 insignificant 1 1.000000 insignificant 0.01908327 0.5217091 insignificant 1 insignificant 0.92180 0.786896 0.1367220 10 0.86776 0.773366 0.0943951 2.4575e-15 9.9940e-01 weaklyHypermeth 1.2288e-13 1.0000e+00 weaklyHypermeth 1.8510e-05 0.99994620 weaklyHypermeth 6.8556e-04 1.000000 weaklyHypermeth 0.1253578 1.2630e-02 weaklyHypermeth 3.9468e-01 insignificant 0.92281 0.903743 0.02061204 10 0.93053 0.895237 0.0352975 2.9031e-02 9.5063e-01 weaklyHypermeth 7.3732e-01 1.0000e+00 insignificant 2.7125e-02 9.9518e-01 weaklyHypermeth 9.0415e-01 1.0000e+00 insignificant 0.0268444 4.0786e-01 insignificant 1.00000000 insignificant 0.925172 0.786517 0.150315 10 0.79112 0.756280 0.0348403 9.2672e-10 0.99997311 weaklyHypermeth 4.0292e-08 1.00000 weaklyHypermeth 6.8837e-04 0.999973 weaklyHypermeth 1.8115e-02 1 weaklyHypermeth 0.1062745 2.9778e-02 weaklyHypermeth 6.7678e-01 insignificant 0.92610 0.903743 0.02673569 10 0.84927 0.895237 -0.0459649 3.9881e-02 9.9045e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.2776e-01 9.5599e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00776112 8.2420e-01 insignificant 1.00000000 insignificant 0.786427 0.903743 -0.1160778 10 0.758374 0.895237 -0.1368630 9.9993e-01 6.7530e-04 weaklyHypometh 1.0000e+00 2.1103e-02 weaklyHypometh 9.9965e-01 2.4518e-02 weaklyHypometh 1.00000000 5.4484e-01 insignificant -0.0985134 4.7906e-02 weaklyHypometh 1.00000000 insignificant chr3 50527630 50528630 33158 CACNA2D2 ENSG00000007402 0.10515 233 8 0.072499 308 9 0.19703 286 9 0.071079 247 5 0.13687 253 9 0.21250 327 9 0.083005 340 9 0.14033 307 9 0.065554 416 9 0.11563 495 9 0.17666 331 9 0.13954 311 9 0.051610 340 9 0.062081 218 4 0.047871 510 9 0.15627 196 9 0.053177 188 9 0.043215 216 4 0.046019 227 9 0.032417 295 9 0.072255 205 10 0.044545 147 5 0.17427 289 9 0.10022 211 9 0.36079 112 5 0.047789 448 9 0.090438 205 9 0.074753 207 8 0.16063 224 9 0.13144 460 9 0.13663 429 10 0.35113 351 9 0.042879 265 9 0.260207 233 9 0.17712 346 8 0.097917 48 3 0.12194 218 8 0.062084 330 9 0.057628 262 8 0.11315 282 8 0.10604 214 8 0.004652 207 7 0.133905 196 5 0.095935 0.076244 0.14706 0.10560 0.059984 0.21069 0.12492 0.061256 0.075278 0.12257 0.22614 0.200837 0.047988 0.112546 0.054143 0.15674 0.042109 0.078567 0.058777 0.045443 0.067766 0.039449 0.088403 0.18268 0.13502 0.056439 0.12107 0.090687 0.15004 0.060162 0.044861 0.29479 0.064825 0.208052 0.3117685 0.07642 0.23974 0.076282 0.059054 0.11258 0.036865 0.009792 0.102639 5 0.11085 0.098904 0.00307910 9 0.10910 0.15186 -0.04276135 0.7713366 4.4243e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9355747 0.32793828 insignificant 1 1.000000 insignificant -0.04498149 0.1959294 insignificant 1 insignificant 0.11085 0.172917 -0.0720726 9 0.10910 0.130774 -0.0216770 4.5369e-01 8.9320e-04 weaklyHypometh 1.0000e+00 1.7864e-01 insignificant 3.9248e-01 0.46333100 insignificant 1.0000e+00 1.000000 insignificant -0.0265994 4.7556e-01 insignificant 1.0000e+00 insignificant 0.11071 0.066379 0.04962959 8 0.10083 0.149844 -0.0490117 3.6393e-02 7.0797e-01 weaklyHypermeth 8.8765e-01 1.0000e+00 insignificant 2.2086e-02 9.6922e-01 weaklyHypermeth 7.6160e-01 1.0000e+00 insignificant 0.0173511 5.3289e-01 insignificant 1.00000000 insignificant 0.098904 0.172917 -0.069929 9 0.15186 0.130774 0.0210844 6.7422e-01 0.01522489 weaklyHypometh 1.0000e+00 1.00000 insignificant 1.6692e-01 0.498057 insignificant 1.0000e+00 1 insignificant 0.0183821 6.8980e-01 insignificant 1.0000e+00 insignificant 0.09835 0.066379 0.04779363 8 0.14294 0.149844 -0.0069084 1.6859e-01 8.0714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7998e-02 9.9001e-01 weaklyHypermeth 6.6659e-01 1.0000e+00 insignificant 0.06233257 1.2802e-01 insignificant 1.00000000 insignificant 0.173883 0.066379 0.1206519 8 0.142662 0.149844 -0.0071822 4.8655e-02 9.9239e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.1781e-01 9.8031e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0439505 3.0476e-01 insignificant 1.00000000 insignificant chr3 50545058 50546058 33162 CACNA2D2 ENSG00000007402 0.78353 105 6 0.716994 101 6 0.69461 60 6 0.756243 199 6 0.78030 63 6 0.85021 270 6 0.738562 109 6 0.68817 85 6 0.859524 38 6 0.94286 36 6 0.74244 216 6 0.77381 66 4 0.206349 24 2 0.933333 30 6 0.655556 60 6 0.76667 25 4 1.000000 107 4 0.647640 95 6 0.815161 141 6 0.804290 130 6 0.914116 49 6 0.675000 65 6 0.76094 60 6 0.70428 98 6 0.78636 383 6 0.698313 210 6 0.518687 49 6 0.729911 34 3 0.78748 112 6 0.54841 177 6 0.53000 197 6 0.79529 107 6 0.634615 131 6 0.658462 136 6 0.12903 88 4 0.399640 134 6 0.57762 149 6 0.576634 217 6 0.542937 210 6 0.69301 96 6 0.63622 192 6 0.707311 103 6 0.613028 211 6 0.768741 0.657280 0.68295 0.75550 0.786476 0.82430 0.72758 0.693665 0.858025 0.94621 0.74512 0.765873 0.231824 0.913580 0.654321 0.77778 0.913737 0.648697 0.806907 0.788673 0.885876 0.656687 0.760132 0.69705 0.78016 0.687658 0.50421 0.815256 0.78792 0.624543 0.517750 0.76364 0.607326 0.660475 0.2521066 0.39481 0.61265 0.549679 0.529643 0.67880 0.627080 0.698190 0.604425 3 0.77755 0.695906 0.07669669 6 0.76382 0.69190 0.07192460 0.0011101 9.9642e-01 weaklyHypermeth 0.97572 1.0000e+00 insignificant 0.0443807 0.97690634 weaklyHypermeth 1 1.000000 insignificant 0.05374704 0.2908718 insignificant 1 insignificant 0.77755 0.542690 0.2376588 6 0.76382 0.512742 0.2510779 8.8302e-11 1.0000e+00 hypermethylated 2.8485e-09 1.0000e+00 hypermethylated 4.8981e-06 0.99995217 hypermethylated 2.1296e-04 1.000000 hypermethylated 0.2618127 2.2302e-02 weaklyHypermeth 5.9308e-01 insignificant 0.77789 0.621921 0.15778477 6 0.78001 0.625774 0.1542379 3.9468e-07 9.9952e-01 weaklyHypermeth 2.1926e-05 1.0000e+00 weaklyHypermeth 2.2753e-04 9.9973e-01 weaklyHypermeth 1.3384e-02 1.0000e+00 weaklyHypermeth 0.1193110 2.0083e-02 weaklyHypermeth 0.77086604 insignificant 0.695906 0.542690 0.156165 6 0.69190 0.512742 0.1791533 9.3950e-06 0.99853035 weaklyHypermeth 2.0878e-04 1.00000 weaklyHypermeth 2.9296e-04 0.996893 weaklyHypermeth 9.0643e-03 1 weaklyHypermeth 0.2080656 5.3319e-02 insignificant 9.3543e-01 insignificant 0.69622 0.621921 0.08232527 6 0.70721 0.625774 0.0814370 9.2200e-04 8.7752e-01 weaklyHypermeth 3.5462e-02 1.0000e+00 weaklyHypermeth 2.1480e-02 9.2901e-01 weaklyHypermeth 7.4069e-01 1.0000e+00 insignificant 0.06556392 1.7403e-01 insignificant 1.00000000 insignificant 0.543427 0.621921 -0.0704803 6 0.542643 0.625774 -0.0831308 9.6988e-01 9.4277e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7406e-01 2.4487e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.1425017 1.5202e-01 insignificant 1.00000000 insignificant chr3 51701787 51702787 33188 TEX264 ENSG00000164081 0.77252 237 8 0.624641 165 8 0.79790 119 9 0.747614 177 8 0.52311 89 6 0.74356 289 8 0.772737 107 9 0.63596 165 8 0.650109 76 8 0.68810 91 7 0.68859 273 9 0.77425 52 7 0.696188 157 8 0.714399 105 8 0.744654 159 8 0.70833 27 1 0.982222 191 4 0.608448 264 7 0.577087 100 4 0.638400 171 8 0.489953 105 6 0.677551 43 1 0.68827 151 8 0.69857 93 6 0.44792 46 3 0.714746 256 9 0.572839 110 6 0.770238 45 2 0.65875 120 7 0.75440 204 8 0.53506 212 9 0.77589 234 9 0.566827 153 8 0.749185 188 8 0.68906 219 6 0.833333 33 5 0.50814 119 8 0.590383 185 7 0.804582 239 8 0.71674 218 8 0.67891 166 8 0.634496 198 7 0.732946 217 9 0.795235 0.712571 0.84476 0.79909 0.694499 0.79429 0.83257 0.785643 0.727043 0.85105 0.75474 0.810331 0.810528 0.797387 0.835002 0.83239 0.947663 0.745850 0.683954 0.820552 0.604749 0.714426 0.749687 0.74212 0.57843 0.760447 0.61073 0.807842 0.79167 0.812676 0.727263 0.84071 0.678284 0.727950 0.6558919 0.78382 0.54671 0.567754 0.765434 0.77982 0.772006 0.808118 0.787963 2 0.78228 0.729128 0.05416703 8 0.64282 0.73688 -0.09405633 0.0019514 5.5070e-01 weaklyHypermeth 0.97572 1.0000e+00 insignificant 0.0070831 0.55664146 weaklyHypermeth 1 1.000000 insignificant 0.05575895 0.1657312 insignificant 1 insignificant 0.78306 0.616499 0.1742118 8 0.64282 0.631044 0.0117751 1.5685e-10 1.0000e+00 weaklyHypermeth 4.7531e-09 1.0000e+00 weaklyHypermeth 5.7290e-03 0.99879974 weaklyHypermeth 1.1692e-01 1.000000 insignificant 0.0482856 4.0653e-01 insignificant 1.0000e+00 insignificant 0.78254 0.765670 0.02125978 8 0.64282 0.712664 -0.0698452 1.0206e-01 7.9392e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8899e-01 5.8011e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0090948 8.0523e-01 insignificant 1.00000000 insignificant 0.729024 0.616071 0.114483 8 0.73568 0.597502 0.1381797 4.6013e-05 0.76015369 weaklyHypermeth 9.2027e-04 1.00000 weaklyHypermeth 1.9257e-02 0.574018 weaklyHypermeth 3.3201e-01 1 insignificant -0.0074733 9.0273e-01 insignificant 1.0000e+00 insignificant 0.72806 0.764706 -0.03417175 8 0.65354 0.629331 0.0242111 8.2161e-01 8.2286e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7070e-01 7.1089e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06485372 1.5382e-01 insignificant 1.00000000 insignificant 0.617187 0.766409 -0.1523465 8 0.688411 0.777452 -0.0890403 9.9997e-01 2.1740e-03 weaklyHypometh 1.0000e+00 5.0558e-02 weaklyHypometh 9.9998e-01 5.3196e-03 weaklyHypometh 1.00000000 1.6624e-01 insignificant -0.0573804 3.4931e-01 insignificant 1.00000000 insignificant chr3 52037822 52038822 33202 RPL29 ENSG00000162244 0.84182 256 5 0.860798 149 5 0.80004 183 5 0.911799 345 5 0.92071 84 5 0.84351 329 5 0.935870 143 5 0.77721 162 5 0.841723 217 5 0.89736 198 5 0.85395 196 5 0.88059 156 5 0.862773 227 5 0.823259 148 5 0.925432 169 5 0.84644 134 5 0.841333 108 5 0.754365 491 5 0.823377 107 5 0.880791 212 5 0.793333 29 4 0.645807 139 5 0.86237 184 5 0.84183 91 5 0.77167 142 5 0.835227 206 5 0.878635 89 5 0.847792 109 5 0.87325 171 5 0.93509 172 5 0.77220 117 5 0.93324 210 5 0.580791 136 5 0.641667 82 5 0.61496 230 5 0.495455 54 5 0.58629 114 5 0.633916 140 5 0.735286 235 5 0.64568 285 5 0.59510 214 5 0.395428 315 5 0.610120 257 5 0.840760 0.859692 0.79836 0.91137 0.918275 0.84357 0.93196 0.771155 0.838693 0.89350 0.85448 0.867842 0.863351 0.821165 0.920600 0.85010 0.837713 0.750412 0.830307 0.882786 0.782514 0.650708 0.860446 0.82939 0.77594 0.827326 0.88642 0.853429 0.87344 0.927214 0.762518 0.93356 0.581130 0.660665 0.6169469 0.46423 0.59166 0.625485 0.740490 0.64829 0.591358 0.391887 0.602647 5 0.84604 0.848101 0.00197135 5 0.84944 0.84778 0.00166286 0.5784412 7.5194e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3388245 0.80485592 insignificant 1 1.000000 insignificant 0.02362032 0.3651476 lowCoverage 1 lowCoverage 0.84604 0.599206 0.2455472 5 0.84944 0.596705 0.2527390 2.0897e-15 1.0000e+00 hypermethylated 1.1610e-13 1.0000e+00 hypermethylated 3.9617e-06 0.99999299 hypermethylated 1.8865e-04 1.000000 hypermethylated 0.2639775 6.5437e-06 hypermethylated 8.1796e-04 hypermethylated 0.84604 0.575804 0.26468517 5 0.84944 0.586761 0.2626836 5.2499e-23 1.0000e+00 hypermethylated 1.0500e-20 1.0000e+00 hypermethylated 5.6139e-12 1.0000e+00 hypermethylated 2.8070e-09 1.0000e+00 hypermethylated 0.2598341 8.6263e-03 weaklyHypermeth 0.47923844 insignificant 0.848101 0.599206 0.249912 5 0.84778 0.596705 0.2510761 1.6983e-08 0.99999961 hypermethylated 6.0652e-07 1.00000 hypermethylated 7.5828e-05 0.999997 hypermethylated 3.2969e-03 1 hypermethylated 0.2403572 2.2047e-06 lowCoverage 3.6745e-04 lowCoverage 0.84810 0.575804 0.25956759 5 0.84778 0.586761 0.2610208 2.0888e-12 1.0000e+00 hypermethylated 2.3209e-10 1.0000e+00 hypermethylated 3.8717e-08 1.0000e+00 hypermethylated 1.9358e-05 1.0000e+00 hypermethylated 0.23621382 9.6332e-03 lowCoverage 0.56666074 lowCoverage 0.599206 0.575804 0.0197098 5 0.596705 0.586761 0.0099446 4.4371e-01 4.9049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5423e-01 5.9482e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0041434 9.4744e-01 insignificant 1.00000000 insignificant chr3 52048633 52049633 33203 RPL29 ENSG00000162244 0.90055 55 5 0.859953 75 4 0.77568 80 7 0.712585 33 4 0.86795 26 1 0.83518 107 6 0.458333 26 1 0.85225 61 5 0.900000 21 2 0.80929 37 5 0.90231 133 5 0.60000 14 0 0.623517 84 5 0.725000 27 3 0.767179 61 4 0.80000 5 1 0.000000 2 0 0.528894 94 5 0.812338 120 5 0.680724 95 5 0.652381 51 5 0.083333 8 0 0.67194 44 4 0.96000 19 2 0.80000 5 1 0.790924 134 7 0.761111 32 3 0.640000 12 1 0.60139 89 5 0.82285 94 7 0.68191 122 7 0.86147 90 5 0.475649 69 6 0.802500 136 5 0.67080 80 7 0.000000 5 0 0.76944 41 3 0.221613 228 6 0.041787 168 5 0.35866 103 5 0.21458 64 5 0.428049 135 4 0.162917 73 4 0.898712 0.841090 0.75575 0.79844 0.856101 0.80381 0.46552 0.801213 0.833333 0.74150 0.87593 0.459770 0.599970 0.892288 0.752785 NA 0.338839 0.510995 0.768473 0.739281 0.860920 0.097771 0.772167 0.91724 NA 0.640392 0.74425 0.496552 0.56432 0.738071 0.609678 0.78533 0.387931 0.730296 0.5270936 0.22454 0.59310 0.145544 0.037426 0.34553 0.228017 0.257191 0.260397 0 0.77336 0.706897 0.06527227 5 0.67658 0.76407 -0.08749024 0.0578505 9.9314e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4603068 0.52093689 insignificant 1 1.000000 insignificant 0.02664349 0.7387036 lowCoverage 1 lowCoverage 0.77336 0.465116 0.3096654 5 0.67658 0.501731 0.1748510 2.7085e-09 9.9876e-01 hypermethylated 7.1277e-08 1.0000e+00 hypermethylated 6.4898e-03 0.79736773 weaklyHypermeth 1.2245e-01 1.000000 insignificant 0.2305849 1.4790e-01 lowCoverage 1.0000e+00 lowCoverage 0.77336 0.241252 0.54246711 5 0.67658 0.220365 0.4562171 2.0644e-28 1.0000e+00 hypermethylated 2.0644e-25 1.0000e+00 hypermethylated 1.2824e-09 1.0000e+00 hypermethylated 4.2745e-07 1.0000e+00 hypermethylated 0.4793879 3.9293e-04 lowCoverage 0.03929341 lowCoverage 0.706897 0.465116 0.254877 5 0.76407 0.501731 0.2623412 3.0063e-05 0.99999034 hypermethylated 6.2631e-04 1.00000 hypermethylated 4.4193e-03 0.987900 weaklyHypermeth 9.4027e-02 1 weaklyHypermeth 0.2039414 2.0334e-01 lowCoverage 1.0000e+00 lowCoverage 0.70690 0.241252 0.47119007 5 0.76407 0.220365 0.5437073 2.1104e-16 1.0000e+00 hypermethylated 6.2255e-14 1.0000e+00 hypermethylated 1.7493e-07 1.0000e+00 hypermethylated 3.4986e-05 1.0000e+00 hypermethylated 0.45274440 5.5432e-04 lowCoverage 0.06928957 lowCoverage 0.465116 0.241252 0.2403691 5 0.501731 0.220365 0.2813661 2.2162e-03 9.9834e-01 weaklyHypermeth 2.8523e-01 1.0000e+00 insignificant 3.9789e-03 9.9528e-01 weaklyHypermeth 0.57751164 1.0000e+00 insignificant 0.2488030 1.3586e-01 lowCoverage 1.00000000 lowCoverage chr3 52094962 52095962 33205 ENSG00000221939 0.88303 91 5 0.905774 235 5 0.80519 127 5 0.975045 75 5 0.71443 93 5 0.95536 241 5 0.865488 120 5 0.85614 124 5 0.851716 95 5 0.91077 64 4 0.80024 279 5 0.86000 52 4 0.948485 81 4 0.886349 70 5 0.890952 108 5 0.85621 58 3 0.000000 4 0 0.879011 80 5 0.905098 139 5 0.993333 173 4 0.821515 96 5 0.900000 20 2 0.90878 154 5 0.91203 103 5 1.00000 10 0 0.940775 261 5 0.895614 144 5 0.768889 68 5 0.93983 152 5 0.90705 255 5 0.94611 294 5 0.95204 274 5 0.875333 181 5 0.946737 108 5 0.92395 364 4 0.916667 9 0 0.89719 133 5 0.844819 266 5 0.964863 155 4 0.96529 139 5 0.96090 38 3 0.982979 58 1 0.954791 80 4 0.911481 0.933735 0.86267 0.95563 0.829869 0.96437 0.89285 0.891565 0.881678 0.90975 0.80979 0.927004 0.890104 0.883122 0.888186 0.89839 0.698491 0.888180 0.888408 0.979747 0.865347 0.945148 0.942917 0.89863 0.96495 0.942106 0.88910 0.911392 0.94537 0.945286 0.946272 0.92557 0.883231 0.959657 0.8203681 0.89145 0.91715 0.712978 0.958535 0.96649 0.954459 0.948290 0.958081 1 0.88263 0.919716 -0.03862406 5 0.89113 0.90849 -0.01736002 0.9837991 1.6201e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9716465 0.12198334 insignificant 1 1.000000 insignificant -0.07058879 0.1669755 lowCoverage 1 lowCoverage 0.88263 0.856739 0.0239637 5 0.89113 0.861499 0.0296328 2.0572e-01 7.3778e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7562e-01 0.05136980 insignificant 1.0000e+00 1.000000 insignificant -0.0636514 2.0402e-01 lowCoverage 1.0000e+00 lowCoverage 0.88263 0.951064 -0.06310992 4 0.89113 0.962510 -0.0713780 1.0000e+00 4.3288e-03 lowCoverage 1.0000e+00 5.4110e-01 lowCoverage 1.0000e+00 1.5645e-03 lowCoverage 1.0000e+00 3.1291e-01 lowCoverage -0.1286344 1.2183e-02 lowCoverage 0.60912945 lowCoverage 0.919716 0.856739 0.057147 5 0.90849 0.861499 0.0469928 1.3685e-02 0.21062064 weaklyHypermeth 2.0125e-01 1.00000 insignificant 2.6353e-01 0.228729 insignificant 1.0000e+00 1 insignificant 0.0069374 7.6804e-01 lowCoverage 1.0000e+00 lowCoverage 0.91972 0.951064 -0.02836592 4 0.90849 0.962510 -0.0540180 9.9614e-01 1.6811e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9904e-01 1.9897e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05804560 7.5709e-03 lowCoverage 0.47318010 lowCoverage 0.856739 0.951064 -0.1103312 4 0.861499 0.962510 -0.1010108 9.6230e-01 9.5659e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8850e-01 6.5979e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0649830 6.0872e-03 lowCoverage 0.27669306 lowCoverage chr3 52499692 52500692 33220 NISCH ENSG00000010322 0.93647 596 17 0.870856 819 17 0.87866 481 16 0.949176 693 17 0.92481 255 14 0.89013 848 17 0.858235 295 16 0.92400 677 17 0.920978 519 17 0.90246 606 17 0.92020 980 17 0.80582 169 10 0.898307 688 17 0.845892 451 17 0.892554 620 17 0.81177 109 4 0.480000 61 4 0.837664 820 16 0.898351 1033 15 0.950276 669 17 0.856095 341 16 0.918614 318 16 0.88838 389 17 0.87457 317 16 0.87927 255 16 0.932927 1268 17 0.792512 571 17 0.741204 239 15 0.93788 943 17 0.96411 1157 17 0.91292 968 17 0.88689 699 17 0.821456 550 17 0.951180 446 17 0.95252 312 9 0.852603 154 10 0.80857 390 16 0.822324 954 17 0.936887 450 17 0.92941 559 16 0.95302 389 17 0.912389 366 15 0.917839 537 17 0.947863 0.883743 0.87071 0.95173 0.923307 0.94336 0.87331 0.926457 0.923953 0.93192 0.91046 0.850983 0.942923 0.900338 0.881050 0.87886 0.735021 0.788505 0.952262 0.933993 0.854953 0.920983 0.912601 0.87219 0.84166 0.930541 0.87939 0.830834 0.94336 0.965306 0.963022 0.94036 0.776787 0.949061 0.9658006 0.74224 0.89130 0.853309 0.950383 0.91904 0.941408 0.883575 0.900059 13 0.91216 0.923891 -0.01253437 17 0.83455 0.86654 -0.03198768 0.9976839 2.4762e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9548894 0.57538599 insignificant 1 1.000000 insignificant -0.01228447 0.6741717 insignificant 1 insignificant 0.91199 0.873752 0.0370857 17 0.79294 0.804041 -0.0110958 4.7467e-02 1.5139e-01 weaklyHypermeth 6.1645e-01 1.0000e+00 insignificant 9.8457e-01 0.01520169 inconclusive 1.0000e+00 1.000000 insignificant 0.0017200 9.6187e-01 insignificant 1.0000e+00 insignificant 0.91222 0.923512 -0.01167429 16 0.86253 0.933111 -0.0705793 9.8320e-01 3.2910e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8026e-01 2.9576e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0600795 1.8730e-02 weaklyHypometh 0.77086604 insignificant 0.923861 0.874064 0.049488 17 0.82617 0.820043 0.0061311 2.3812e-02 0.73898850 weaklyHypermeth 3.3072e-01 1.00000 insignificant 9.8478e-01 0.120712 insignificant 1.0000e+00 1 insignificant 0.0140044 6.7728e-01 insignificant 1.0000e+00 insignificant 0.92436 0.923478 0.00075710 16 0.92337 0.929176 -0.0058051 6.2994e-01 3.0229e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8642e-01 5.0423e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04779507 2.8248e-02 weaklyHypometh 0.83081321 insignificant 0.874688 0.923512 -0.0447556 16 0.893378 0.933111 -0.0397321 6.7283e-01 1.4132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6243e-01 7.0739e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0617995 7.2362e-02 insignificant 1.00000000 insignificant chr3 53178026 53179026 33233 PRKCD ENSG00000163932 0.92663 290 5 0.891960 217 5 0.80691 114 5 0.879126 286 5 0.89872 106 5 0.90026 380 5 0.877453 181 5 0.85295 138 5 0.825397 98 5 0.94348 123 5 0.93569 242 5 0.95000 35 2 0.938462 83 4 0.932814 73 3 0.795798 157 5 0.78000 42 5 NA 0 0 0.723142 875 5 0.854259 262 5 0.851872 226 5 0.974583 100 5 0.814919 104 4 0.78435 136 5 0.88462 44 3 0.83743 477 5 0.833719 268 5 0.534239 175 5 0.960000 35 3 0.88548 285 5 0.93676 257 5 0.91202 294 5 0.88839 214 5 0.719982 150 5 0.954427 220 5 0.97294 485 4 0.550366 254 5 0.82609 126 5 0.690568 284 5 0.829411 282 5 0.77017 239 5 0.70139 278 5 0.672902 551 5 0.754429 154 5 0.894593 0.889356 0.78418 0.87160 0.827310 0.87530 0.81969 0.781202 0.816839 0.90363 0.89506 0.914747 0.895073 0.885444 0.764670 0.62488 NA 0.684188 0.856570 0.789702 0.956663 0.773517 0.766004 0.94364 0.73913 0.786980 0.76661 0.931797 0.88739 0.894465 0.900181 0.88503 0.834894 0.952890 0.9538572 0.35092 0.99679 0.501779 0.758594 0.69486 0.629465 0.535090 0.744736 3 0.82837 0.849728 -0.01635264 5 0.89737 0.76105 0.13631912 0.7180034 5.9254e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7510242 0.79577157 insignificant 1 1.000000 insignificant 0.01796243 0.6300983 lowCoverage 1 lowCoverage 0.82832 0.833333 0.0522689 5 0.88026 0.687675 0.1925847 6.2422e-01 1.0716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4185e-01 0.44180349 insignificant 1.0000e+00 1.000000 insignificant 0.0861097 2.5885e-01 lowCoverage 1.0000e+00 lowCoverage 0.82828 0.658245 0.17060943 5 0.85631 0.715751 0.1405600 7.7679e-07 7.7887e-01 weaklyHypermeth 4.0884e-05 1.0000e+00 weaklyHypermeth 2.7915e-04 9.9066e-01 weaklyHypermeth 1.5509e-02 1.0000e+00 weaklyHypermeth 0.1261782 5.5779e-03 lowCoverage 0.34861793 lowCoverage 0.850314 0.833883 0.064197 5 0.86546 0.825210 0.0402549 4.2894e-01 0.33847056 insignificant 1.0000e+00 1.00000 insignificant 9.4795e-01 0.247956 insignificant 1.0000e+00 1 insignificant 0.0681473 3.8990e-01 lowCoverage 1.0000e+00 lowCoverage 0.85031 0.658245 0.18127208 5 0.86546 0.715751 0.1497132 9.7055e-07 9.7532e-01 weaklyHypermeth 5.1082e-05 1.0000e+00 weaklyHypermeth 2.8042e-04 9.9335e-01 weaklyHypermeth 1.4021e-02 1.0000e+00 weaklyHypermeth 0.10821579 2.5648e-02 lowCoverage 0.82762721 lowCoverage 0.833883 0.658245 0.1036231 5 0.825210 0.715751 0.1094583 2.5161e-02 9.9192e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.7154e-02 9.9862e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.0400685 5.9719e-01 lowCoverage 1.00000000 lowCoverage chr3 53246774 53247774 33234 ENSG00000222060 0.88502 153 4 0.860009 209 6 0.84521 57 6 0.882830 83 6 0.92353 55 6 0.73271 127 4 0.863666 128 6 0.87778 49 4 0.751389 38 6 0.90572 48 4 0.87530 231 6 0.66667 36 4 0.791071 61 4 0.722222 29 4 0.877778 65 4 0.87500 20 0 0.893708 2140 4 0.736111 47 4 0.845238 26 4 0.888889 151 4 0.778571 25 3 0.500000 2 0 0.73896 45 4 0.80782 27 2 0.75313 116 6 0.814361 161 6 0.834776 43 4 0.928571 17 0 0.88889 29 4 0.89098 182 6 0.91229 212 6 0.88869 114 6 0.754274 62 6 0.604902 88 6 0.84592 116 6 0.416667 28 2 0.74973 82 6 0.805033 110 6 0.933333 181 6 0.82799 179 6 0.85123 222 6 0.875000 88 4 0.901218 168 6 0.817971 0.801281 0.86375 0.83712 0.888235 0.72354 0.81699 0.866667 0.674167 0.84781 0.81847 0.818161 0.675754 0.685185 0.802222 0.81389 0.892074 0.704630 0.853964 0.828395 0.719444 0.769310 0.782727 0.65648 0.67304 0.747635 0.74646 0.861111 0.82222 0.834243 0.867092 0.86612 0.700427 0.615490 0.7216623 0.37222 0.68124 0.759639 0.895556 0.80591 0.826314 0.865121 0.889403 0 0.86967 0.844720 0.04200753 6 0.88655 0.85169 0.03485525 0.0584136 7.0128e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5194774 0.31671200 insignificant 1 1.000000 insignificant 0.02357247 0.5378012 lowCoverage 1 lowCoverage 0.86967 0.719588 0.1612004 6 0.88655 0.728399 0.1581483 1.2244e-10 9.9432e-01 weaklyHypermeth 3.8263e-09 1.0000e+00 weaklyHypermeth 1.0704e-05 0.99985953 weaklyHypermeth 4.2816e-04 1.000000 weaklyHypermeth 0.1389051 8.6751e-02 lowCoverage 1.0000e+00 lowCoverage 0.86967 0.867542 0.00274080 6 0.88655 0.876157 0.0103905 5.4804e-01 1.9380e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1142e-01 2.0054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0427635 1.1088e-01 lowCoverage 1.00000000 lowCoverage 0.843782 0.720165 0.119178 6 0.83206 0.767199 0.0648634 1.3623e-04 0.96798260 weaklyHypermeth 2.5228e-03 1.00000 weaklyHypermeth 2.2846e-04 0.990512 weaklyHypermeth 7.6154e-03 1 weaklyHypermeth 0.1153327 1.5505e-01 lowCoverage 1.0000e+00 lowCoverage 0.84472 0.867542 -0.03004346 6 0.85169 0.876157 -0.0244647 4.3929e-01 1.5755e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2071e-01 1.0389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06633598 1.0464e-01 lowCoverage 1.00000000 lowCoverage 0.719588 0.867542 -0.1546603 6 0.728399 0.876157 -0.1477577 9.4957e-01 5.8682e-06 weaklyHypometh 1.0000e+00 2.9802e-04 weaklyHypometh 9.7713e-01 5.7119e-06 weaklyHypometh 1.00000000 9.5199e-04 weaklyHypometh -0.1816687 3.7514e-02 weaklyHypometh 0.87243012 insignificant chr3 54010226 54011226 33279 ENSG00000113811 0.84199 86 2 0.859659 83 6 0.50000 30 4 0.663235 111 6 0.72666 68 8 0.80326 93 6 0.671726 60 8 0.87533 90 6 0.768601 36 2 0.80357 32 4 0.60063 107 6 0.58750 36 4 0.794207 96 8 0.775000 52 8 0.726736 50 8 0.89015 38 4 0.750000 4 0 0.865880 110 7 0.878968 52 6 0.825893 47 6 0.721429 40 5 1.000000 9 0 0.56818 86 4 0.52778 36 3 0.76573 70 2 0.781136 80 8 0.855655 42 5 0.714286 9 0 0.72387 106 8 0.67954 101 8 0.68849 48 6 0.79271 61 6 0.751038 112 8 0.793770 67 6 0.80519 47 4 0.711111 22 2 0.73519 60 6 0.778307 52 6 0.742848 95 6 0.90533 78 2 0.75402 104 6 0.909314 81 2 0.775421 100 6 0.850332 0.802303 0.54667 0.87992 0.737792 0.73090 0.61619 0.904048 0.759524 0.87810 0.70126 0.566667 0.766507 0.832000 0.766519 0.92889 0.762720 0.819950 0.817143 0.789048 0.756095 0.931272 0.530000 0.71222 0.83019 0.767082 0.81381 0.853333 0.70180 0.812051 0.730476 0.84270 0.790459 0.779649 0.9478788 0.71911 0.79156 0.788825 0.759330 0.89195 0.763719 0.894118 0.787556 0 0.77266 0.767103 0.00282557 6 0.78706 0.71432 0.07273702 0.0537123 4.3064e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0771726 0.43315814 insignificant 1 1.000000 insignificant 0.02555033 0.5600917 lowCoverage 1 lowCoverage 0.77266 0.780556 -0.0089855 6 0.78706 0.740609 0.0464483 1.3930e-01 5.6545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6407e-01 0.64046971 insignificant 1.0000e+00 1.000000 insignificant -0.0019838 9.4497e-01 insignificant 1.0000e+00 insignificant 0.77159 0.847162 -0.03682959 6 0.76044 0.841432 -0.0809928 9.1142e-01 5.6227e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7339e-01 6.5412e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0569355 2.3561e-01 lowCoverage 1.00000000 lowCoverage 0.767103 0.780556 -0.013674 6 0.71432 0.740609 -0.0262887 4.1353e-01 0.23428480 insignificant 1.0000e+00 1.00000 insignificant 3.8047e-01 0.589608 insignificant 1.0000e+00 1 insignificant -0.0275342 4.8739e-01 lowCoverage 1.0000e+00 lowCoverage 0.77172 0.847162 -0.03803466 6 0.75674 0.841432 -0.0846969 9.9566e-01 1.1494e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8344e-01 3.3973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08248585 1.3650e-01 lowCoverage 1.00000000 lowCoverage 0.781513 0.847162 -0.0032363 6 0.749852 0.841432 -0.0915804 6.9267e-01 4.9557e-02 weaklyHypometh 1.0000e+00 7.8661e-01 insignificant 9.0340e-01 4.3405e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0549517 2.2443e-01 lowCoverage 1.00000000 lowCoverage chr3 54572199 54573199 33338 CACNA2D3 ENSG00000157445 0.90331 159 6 0.829467 172 6 0.49846 102 6 0.877434 137 6 0.94444 50 6 0.89893 230 6 0.822222 35 2 0.92400 198 6 0.900799 64 6 0.88641 53 6 0.95843 271 6 0.00000 1 0 0.876817 131 6 0.930556 65 2 0.895833 105 6 1.00000 1 0 1.000000 4 0 0.798147 221 6 0.920899 179 6 0.959560 203 6 0.910714 52 6 0.780220 92 6 0.93729 106 6 0.96263 70 6 0.92202 47 6 0.940412 263 6 0.820831 151 6 0.861905 38 6 0.85726 149 3 0.94132 294 6 0.86161 194 6 0.89944 134 6 0.561508 153 6 0.665000 61 2 0.99219 119 4 0.611111 11 0 0.66625 81 6 0.509005 289 6 0.221003 99 5 0.48720 138 6 0.22667 108 2 0.760536 69 2 0.752910 87 2 0.881416 0.786714 0.46846 0.87042 0.953586 0.88947 0.77911 0.911935 0.850642 0.89028 0.95498 NA 0.871931 0.930380 0.903165 NA 0.915377 0.784668 0.911553 0.952064 0.903255 0.771027 0.920596 0.95696 0.91894 0.932462 0.80921 0.886438 0.85803 0.931615 0.865569 0.89053 0.474312 0.575781 0.6336741 0.55696 0.61937 0.418483 0.240105 0.49742 0.309873 0.702168 0.728662 0 0.85570 0.883648 -0.02564635 6 0.87682 0.89588 -0.01906013 0.9119864 3.0403e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8045460 0.48705515 insignificant 1 1.000000 insignificant -0.05001792 0.3520253 lowCoverage 1 lowCoverage 0.85570 0.480392 0.4308926 6 0.87682 0.603736 0.2730823 2.9884e-15 9.9321e-01 hypermethylated 1.4230e-13 1.0000e+00 hypermethylated 7.9695e-05 0.99762076 hypermethylated 2.6565e-03 1.000000 hypermethylated 0.1737764 6.8057e-02 lowCoverage 1.0000e+00 lowCoverage 0.85570 0.524950 0.31871369 2 0.87682 0.495352 0.3814668 5.7169e-18 1.0000e+00 lowCoverage 8.1670e-16 1.0000e+00 lowCoverage 9.6563e-07 1.0000e+00 lowCoverage 8.7785e-05 1.0000e+00 lowCoverage 0.3516235 3.7821e-02 lowCoverage 1.00000000 lowCoverage 0.883648 0.480392 0.419324 6 0.89588 0.603736 0.2921424 8.2741e-17 0.98612830 hypermethylated 7.5220e-15 1.00000 hypermethylated 2.2618e-04 0.979981 hypermethylated 7.6154e-03 1 hypermethylated 0.2237944 2.2425e-02 lowCoverage 5.3392e-01 lowCoverage 0.88365 0.524950 0.34745211 2 0.89588 0.495352 0.4005269 3.4630e-17 1.0000e+00 lowCoverage 1.7813e-14 1.0000e+00 lowCoverage 5.8358e-07 1.0000e+00 lowCoverage 7.5365e-05 1.0000e+00 lowCoverage 0.40164139 2.7312e-02 lowCoverage 0.82762721 lowCoverage 0.480392 0.524950 -0.2472354 2 0.603736 0.495352 0.1083845 2.2819e-03 5.5785e-03 lowCoverage 2.8523e-01 1.1385e-01 lowCoverage 2.2289e-01 1.0172e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1778470 2.4085e-01 lowCoverage 1.00000000 lowCoverage chr3 54792481 54793481 33370 CACNA2D3 ENSG00000157445 0.84884 228 5 0.777683 147 6 0.85194 85 4 0.878868 98 6 0.83947 63 4 0.73646 287 6 0.713802 93 4 0.80635 96 4 0.817633 95 4 0.77504 91 4 0.81083 234 6 0.76042 77 4 0.747416 125 4 0.878205 19 1 0.848388 123 4 0.80655 61 4 0.610505 88 4 0.637829 144 5 0.816450 167 5 0.776691 230 6 0.709211 70 4 0.798636 52 4 0.80208 92 4 0.80368 61 4 0.76547 86 3 0.784452 210 6 0.717909 109 5 0.696441 63 4 0.71938 131 5 0.83655 234 6 0.83964 178 5 0.81862 222 5 0.729355 98 4 0.771264 119 5 0.43649 112 5 0.757516 109 4 0.66439 87 5 0.765181 202 5 0.860051 131 5 0.79204 206 5 0.85596 157 5 0.707296 103 4 0.823933 160 6 0.853978 0.782613 0.79919 0.90362 0.874926 0.79465 0.79739 0.886496 0.765239 0.81295 0.87140 0.848159 0.911210 0.798718 0.874318 0.84528 0.817484 0.859941 0.847387 0.746684 0.743544 0.837453 0.880462 0.77581 0.82951 0.811515 0.86089 0.855115 0.79175 0.841259 0.807579 0.79014 0.816271 0.781853 0.7077800 0.74799 0.79957 0.777267 0.832446 0.88420 0.876430 0.863849 0.853986 4 0.81843 0.808892 0.00330719 5 0.76694 0.76375 0.00318942 0.4208441 6.3003e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4500060 0.84680781 insignificant 1 1.000000 insignificant 0.01262922 0.5682347 lowCoverage 1 lowCoverage 0.81850 0.733150 0.0767248 5 0.79607 0.545355 0.2507198 1.1436e-03 9.9979e-01 weaklyHypermeth 1.9382e-02 1.0000e+00 weaklyHypermeth 1.5389e-01 0.99317426 insignificant 1.0000e+00 1.000000 insignificant 0.0996019 1.2086e-01 lowCoverage 1.0000e+00 lowCoverage 0.81843 0.850727 -0.03294367 5 0.76694 0.859460 -0.0925171 9.8085e-01 5.5467e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2171e-01 2.6765e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0208872 5.3842e-01 lowCoverage 1.00000000 lowCoverage 0.808892 0.734160 0.063148 5 0.76375 0.623263 0.1404904 4.7980e-03 0.99495163 weaklyHypermeth 7.6159e-02 1.00000 weaklyHypermeth 2.4168e-01 0.988240 insignificant 1.0000e+00 1 insignificant 0.0869726 1.6472e-01 lowCoverage 1.0000e+00 lowCoverage 0.80889 0.850727 -0.03845214 5 0.76375 0.859460 -0.0957065 9.8306e-01 8.3021e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9392e-01 2.7227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03351641 3.2829e-01 lowCoverage 1.00000000 lowCoverage 0.734160 0.850727 -0.1072479 5 0.623263 0.859460 -0.2361969 9.9998e-01 1.8398e-03 weaklyHypometh 1.0000e+00 4.4874e-02 weaklyHypometh 9.9238e-01 6.5079e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.1204891 8.0544e-02 lowCoverage 1.00000000 lowCoverage chr3 55951371 55952371 33608 C3orf51 ENSG00000178189 0.83333 381 14 0.754617 134 13 0.67498 134 8 0.847275 363 14 0.84982 57 5 0.82557 401 15 0.830766 101 9 0.72531 126 12 0.800000 47 2 0.90556 83 7 0.87863 230 15 0.97876 59 4 0.897529 160 9 NA 0 0 0.748524 102 11 0.93434 63 5 0.651948 65 6 0.872165 361 14 0.854260 127 15 0.860994 265 14 0.819444 32 3 0.847156 113 6 0.89829 141 14 0.82639 43 2 0.96795 66 4 0.827717 201 13 0.826737 109 7 0.867965 48 4 0.71084 110 9 0.87516 303 12 0.90160 215 13 0.84614 439 15 0.729151 156 11 0.857071 97 7 0.73621 273 15 0.741667 60 7 0.84722 40 2 0.798061 228 15 0.856765 307 14 0.87210 396 14 0.90631 372 14 0.836482 345 14 0.914749 427 14 0.863378 0.758947 0.81320 0.91065 0.983101 0.87869 0.85833 0.859091 0.850000 0.85681 0.94201 0.970139 0.854984 NA 0.837569 0.84692 0.664998 0.876839 0.845786 0.890351 0.871539 0.936889 0.933333 0.89932 0.94097 0.907639 0.81228 0.909733 0.87917 0.845918 0.898279 0.84419 0.813410 0.832292 0.7940025 0.96285 0.88538 0.832283 0.908529 0.87829 0.904942 0.902417 0.936843 0 0.85482 0.846703 -0.00079537 13 0.85039 0.84005 0.01033940 0.6431742 8.7385e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9901923 0.32852215 insignificant 1 1.000000 insignificant -0.02368432 0.3765613 insignificant 1 insignificant 0.85442 0.811475 0.0351322 14 0.79157 0.744785 0.0467854 1.9829e-03 9.6069e-01 weaklyHypermeth 3.3048e-02 1.0000e+00 weaklyHypermeth 1.5618e-01 0.92329055 insignificant 1.0000e+00 1.000000 insignificant 0.0427019 1.8623e-01 insignificant 1.0000e+00 insignificant 0.85469 0.911749 -0.04448222 13 0.84104 0.864262 -0.0232185 9.6478e-01 6.0470e-03 weaklyHypometh 1.0000e+00 6.7189e-01 insignificant 9.8967e-01 2.2186e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0496821 5.7010e-02 insignificant 1.00000000 insignificant 0.846535 0.812427 0.038519 12 0.83006 0.791334 0.0387238 3.8898e-02 0.94411001 weaklyHypermeth 5.0517e-01 1.00000 insignificant 3.0272e-02 0.995680 weaklyHypermeth 4.7300e-01 1 insignificant 0.0663862 4.6381e-02 weaklyHypermeth 8.8268e-01 insignificant 0.84653 0.911749 -0.04036555 13 0.83006 0.864262 -0.0342041 9.9140e-01 1.9928e-03 weaklyHypometh 1.0000e+00 3.9856e-01 insignificant 7.2679e-01 6.4178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02599774 2.8015e-01 insignificant 1.00000000 insignificant 0.812427 0.911749 -0.0849313 12 0.791334 0.864262 -0.0729279 9.9292e-01 5.9604e-06 weaklyHypometh 1.0000e+00 2.9802e-04 weaklyHypometh 9.8979e-01 3.0702e-03 weaklyHypometh 1.00000000 1.2954e-01 insignificant -0.0923840 1.0209e-02 weaklyHypometh 0.37453803 insignificant chr3 56257565 56258565 33673 ENSG00000200238 0.76161 191 6 0.709893 90 5 0.69444 17 0 0.737395 147 6 0.79828 87 6 0.75962 52 4 0.803168 104 6 0.75498 74 6 0.708333 46 3 0.72963 44 6 0.74761 123 6 0.87500 39 6 0.713400 99 6 0.810796 92 6 0.685315 73 6 0.83810 51 6 1.000000 24 3 0.742648 200 6 0.863095 33 3 0.708333 30 3 0.694444 10 0 0.750000 13 0 0.75352 129 6 0.88889 45 6 0.71056 84 3 0.727513 48 6 0.791667 24 2 0.883333 17 2 0.75009 141 6 0.67407 41 4 0.78472 27 3 0.74707 54 5 0.634188 92 5 0.791259 73 6 0.72302 52 6 0.166667 6 0 0.69081 60 5 0.777778 48 6 0.796847 138 6 0.77644 128 6 0.79286 141 6 0.794767 169 6 0.772687 131 6 0.772020 0.715374 0.69048 0.76207 0.804469 0.77770 0.80988 0.773933 0.714286 0.71614 0.74862 0.900298 0.724272 0.817216 0.697268 0.83486 0.869810 0.749493 0.861820 0.737103 0.656746 0.750000 0.755745 0.87698 0.74349 0.748677 0.78075 0.869048 0.75576 0.701257 0.827381 0.73163 0.654151 0.774076 0.7185374 0.42531 0.71555 0.799320 0.822953 0.79728 0.810374 0.798995 0.795997 0 0.75804 0.780411 -0.01774386 6 0.75936 0.77531 -0.01595632 0.7378652 2.1116e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7649668 0.07784360 insignificant 1 1.000000 insignificant 0.00909289 0.7274759 lowCoverage 1 lowCoverage 0.75804 0.716012 0.0450356 5 0.75936 0.727913 0.0314459 3.9522e-02 7.8592e-01 weaklyHypermeth 5.3304e-01 1.0000e+00 insignificant 2.2062e-02 0.98487273 weaklyHypermeth 3.6167e-01 1.000000 insignificant 0.1414622 2.0207e-01 lowCoverage 1.0000e+00 lowCoverage 0.75804 0.790665 -0.03083130 6 0.75936 0.786763 -0.0274047 7.7147e-01 1.4596e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.0793e-01 1.6085e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0146382 4.2285e-01 lowCoverage 1.00000000 lowCoverage 0.780411 0.716012 0.063735 5 0.77531 0.727913 0.0474022 3.4777e-02 0.84088987 weaklyHypermeth 4.6181e-01 1.00000 insignificant 1.3281e-02 0.989187 weaklyHypermeth 2.3300e-01 1 insignificant 0.1323693 2.2906e-01 lowCoverage 1.0000e+00 lowCoverage 0.78041 0.790665 -0.01871433 6 0.77531 0.786763 -0.0114484 7.0531e-01 1.0412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3284e-01 3.9043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02373107 2.5536e-01 lowCoverage 1.00000000 lowCoverage 0.716012 0.790665 -0.0798466 5 0.727913 0.786763 -0.0588506 9.6116e-01 2.4413e-02 weaklyHypometh 1.0000e+00 4.2829e-01 insignificant 9.8452e-01 2.9318e-03 weaklyHypometh 1.00000000 1.2954e-01 insignificant -0.1561004 1.6403e-01 lowCoverage 1.00000000 lowCoverage chr3 57163470 57164470 33711 SPATA12 ENSG00000186451 0.79328 194 7 0.688675 213 7 0.72052 85 6 0.794083 208 7 0.86270 63 7 0.91631 346 7 0.683923 129 7 0.81959 85 7 0.703159 97 7 0.81370 52 3 0.86550 232 7 0.84944 40 2 0.548980 58 3 0.647059 35 1 0.738095 65 6 0.87500 30 3 0.663085 342 4 0.393334 151 7 0.846474 77 5 0.839773 275 7 0.743831 69 6 0.343750 50 3 0.87294 118 5 0.80275 76 5 0.54651 134 5 0.613704 201 7 0.795692 51 5 0.791667 29 3 0.47319 56 2 0.83126 189 7 0.87747 212 7 0.86438 268 7 0.233925 236 7 0.166667 51 5 0.22148 122 4 0.349415 73 3 0.22975 185 7 0.602041 168 7 0.369101 232 5 0.30335 157 5 0.63320 204 5 0.732493 50 2 0.436302 217 5 0.783102 0.664105 0.68972 0.78415 0.898677 0.89802 0.85850 0.818152 0.669174 0.87951 0.86412 0.713819 0.608163 0.836134 0.690476 0.82883 0.693074 0.431776 0.697650 0.833552 0.715043 0.460336 0.880447 0.80042 0.69401 0.771837 0.79142 0.791667 0.61360 0.809205 0.788646 0.85978 0.314635 0.117108 0.3557179 0.40664 0.29928 0.306122 0.357010 0.40003 0.599278 0.781046 0.449293 1 0.81311 0.796972 0.01533926 7 0.69864 0.73911 -0.04047345 0.5307203 6.8967e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5880970 0.64768702 insignificant 1 1.000000 insignificant 0.04003733 0.5013851 insignificant 1 insignificant 0.81311 0.348503 0.4347269 7 0.69864 0.297847 0.4007910 3.8198e-23 1.0000e+00 hypermethylated 3.1831e-21 1.0000e+00 hypermethylated 1.0557e-09 1.00000000 hypermethylated 1.7595e-07 1.000000 hypermethylated 0.4525875 3.7104e-04 hypermethylated 2.8541e-02 hypermethylated 0.81415 0.441860 0.37119046 5 0.80301 0.448660 0.3543504 1.8876e-21 1.0000e+00 hypermethylated 3.1460e-19 1.0000e+00 hypermethylated 4.7196e-08 1.0000e+00 hypermethylated 5.8995e-06 1.0000e+00 hypermethylated 0.2582453 2.9721e-02 lowCoverage 1.00000000 lowCoverage 0.796972 0.348503 0.434246 7 0.73911 0.297847 0.4412645 1.5440e-16 0.99999999 hypermethylated 1.1877e-14 1.00000 hypermethylated 2.9569e-07 1.000000 hypermethylated 3.2854e-05 1 hypermethylated 0.4125502 3.9414e-04 hypermethylated 3.2368e-02 hypermethylated 0.79765 0.441860 0.35397183 5 0.78362 0.448660 0.3349592 2.4902e-16 1.0000e+00 hypermethylated 6.2255e-14 1.0000e+00 hypermethylated 1.1753e-05 1.0000e+00 hypermethylated 7.1904e-04 1.0000e+00 hypermethylated 0.21820795 5.4967e-02 lowCoverage 1.00000000 lowCoverage 0.350602 0.441860 -0.1268980 5 0.382946 0.448660 -0.0657142 7.4267e-01 7.1745e-03 weaklyHypometh 1.0000e+00 1.4349e-01 insignificant 9.6027e-01 6.9023e-03 weaklyHypometh 1.00000000 1.9721e-01 insignificant -0.1943422 9.7963e-02 lowCoverage 1.00000000 lowCoverage chr3 57167944 57168944 33713 SPATA12 ENSG00000186451 0.10254 192 4 0.073195 245 5 0.12259 131 5 0.060285 153 5 0.12477 120 4 0.30527 389 5 0.162276 202 5 0.10797 138 5 0.068497 171 5 0.25959 96 5 0.34052 244 5 0.16714 51 4 0.090385 95 5 0.110526 73 5 0.073111 141 5 0.10667 48 4 0.000000 37 2 0.048444 158 4 0.022222 108 4 0.063289 277 5 0.156061 68 5 0.000000 52 2 0.21961 111 5 0.28381 91 5 0.20982 27 2 0.175092 295 5 0.163335 86 5 0.046753 56 5 0.30338 116 4 0.20599 268 5 0.11072 289 5 0.37412 238 5 0.460188 140 5 0.478718 92 4 0.58730 88 2 0.066667 14 1 0.62029 135 5 0.124115 228 5 0.068249 318 5 0.13335 255 5 0.10405 125 4 0.082799 195 4 0.058471 240 5 0.109637 0.085936 0.13740 0.06239 0.141158 0.34918 0.13079 0.131896 0.061667 0.24151 0.30267 0.071035 0.052014 0.052839 0.060184 0.12441 0.081054 0.064969 0.044619 0.042546 0.149785 0.038603 0.245309 0.14466 0.31906 0.162934 0.13924 0.046631 0.33704 0.208234 0.104941 0.38843 0.481166 0.456541 0.7821522 0.12907 0.69472 0.165385 0.059944 0.10551 0.062851 0.058437 0.052507 2 0.14565 0.221567 -0.07179102 5 0.13995 0.20489 -0.06493492 0.9982023 5.2088e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9931354 0.00619250 weaklyHypometh 1 1.000000 insignificant -0.06692682 0.0802577 lowCoverage 1 lowCoverage 0.14565 0.450502 -0.2831268 5 0.13995 0.371885 -0.2319318 9.9887e-01 1.0754e-07 hypomethylated 1.0000e+00 5.3769e-05 hypomethylated 9.9807e-01 0.00022222 hypomethylated 1.0000e+00 0.080505 hypomethylated -0.2690821 3.7956e-02 lowCoverage 8.6264e-01 lowCoverage 0.14565 0.106796 0.05653996 5 0.13995 0.085823 0.0541296 1.5211e-02 9.8451e-01 weaklyHypermeth 4.1111e-01 1.0000e+00 insignificant 1.2066e-01 8.6988e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0310805 2.1021e-01 lowCoverage 1.00000000 lowCoverage 0.221567 0.450502 -0.207701 5 0.20489 0.371885 -0.1669969 9.7092e-01 0.00064827 hypomethylated 1.0000e+00 0.32413 insignificant 9.7354e-01 0.011021 weaklyHypometh 1.0000e+00 1 insignificant -0.2021553 9.2837e-02 lowCoverage 1.0000e+00 lowCoverage 0.22157 0.106796 0.13228751 5 0.20489 0.085823 0.1190645 5.5557e-05 1.0000e+00 weaklyHypermeth 2.5253e-03 1.0000e+00 weaklyHypermeth 1.3550e-03 9.9994e-01 weaklyHypermeth 5.8914e-02 1.0000e+00 weaklyHypermeth 0.09800736 1.0407e-02 lowCoverage 0.57818878 lowCoverage 0.450502 0.106796 0.3566659 5 0.371885 0.085823 0.2860614 2.5632e-05 9.9998e-01 hypermethylated 8.5440e-03 1.0000e+00 hypermethylated 6.2846e-04 9.9991e-01 hypermethylated 0.20948607 1.0000e+00 insignificant 0.3001627 2.6219e-02 lowCoverage 0.63947746 lowCoverage chr3 57574467 57575467 33720 ARF4 ENSG00000168374 0.80418 366 8 0.544805 107 7 0.72727 39 3 0.796557 298 8 0.72045 84 7 0.78709 126 7 0.798685 104 8 0.77768 83 6 0.718750 27 2 0.79091 61 4 0.72246 177 8 0.65000 16 2 0.584349 111 5 0.629044 68 7 0.626736 69 6 0.60714 18 0 0.750000 4 0 0.695875 543 7 0.528139 108 7 0.795119 143 7 0.700000 7 0 0.666667 15 0 0.79613 114 7 0.68537 28 2 0.63070 89 6 0.810016 152 8 0.677778 43 5 0.560000 22 2 0.66455 151 7 0.73601 138 8 0.75406 155 7 0.66593 89 7 0.647187 129 7 0.787834 127 8 0.78514 304 8 0.812500 12 0 0.52044 105 7 0.786025 231 7 0.731859 235 8 0.75482 263 8 0.76112 296 8 0.801160 268 7 0.757745 193 8 0.647325 0.548152 0.63184 0.62669 0.513060 0.56826 0.61975 0.517748 0.563433 0.58358 0.56170 0.640809 0.549732 0.554653 0.469942 0.48683 0.685585 0.605770 0.548330 0.496491 0.747094 0.672467 0.639481 0.51599 0.57199 0.653555 0.72741 0.647388 0.58978 0.564150 0.565964 0.61946 0.523603 0.600085 0.6567164 0.61530 0.59756 0.620688 0.596182 0.60885 0.624684 0.654264 0.592529 0 0.73668 0.781655 -0.02384688 7 0.72496 0.76909 -0.04413248 0.9575757 6.2065e-02 insignificant 1.00000 1.0000e+00 insignificant 0.7132589 0.07131990 insignificant 1 1.000000 insignificant 0.00715980 0.8036361 lowCoverage 1 lowCoverage 0.73668 0.819383 0.0089855 7 0.72496 0.675615 0.0493404 3.7675e-01 7.3606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4499e-01 0.75430263 insignificant 1.0000e+00 1.000000 insignificant -0.0204265 7.0252e-01 insignificant 1.0000e+00 insignificant 0.73668 0.795219 -0.02485529 7 0.72496 0.744602 -0.0196466 9.8552e-01 1.6291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9670e-01 1.0618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0585782 1.8346e-02 weaklyHypometh 0.77086604 insignificant 0.781655 0.819383 0.032828 7 0.76909 0.675615 0.0934729 1.9194e-01 0.94468687 insignificant 1.0000e+00 1.00000 insignificant 4.6979e-01 0.895176 insignificant 1.0000e+00 1 insignificant -0.0275863 6.0797e-01 lowCoverage 1.0000e+00 lowCoverage 0.78166 0.795219 -0.00402061 7 0.76909 0.744602 0.0244859 5.9974e-01 5.1464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5635e-01 1.1575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06573804 1.2371e-02 lowCoverage 0.64083120 lowCoverage 0.819383 0.795219 -0.0361618 7 0.675615 0.744602 -0.0689870 9.7212e-01 1.8401e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9314e-01 5.3620e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0381518 4.6378e-01 insignificant 1.00000000 insignificant chr3 57579765 57580765 33721 ENSG00000203650,ENSG00000210841 0.84682 101 6 0.782259 129 6 0.70922 73 6 0.853505 108 6 0.87846 59 6 0.74357 202 6 0.761995 82 6 0.82163 109 6 0.860648 60 6 0.75150 53 6 0.84622 166 6 0.69415 52 6 0.798391 89 6 0.833333 24 4 0.677458 85 6 0.49784 29 2 0.923077 22 2 0.900498 135 6 0.844907 98 6 0.848346 160 7 0.795238 39 6 0.890909 70 5 0.82953 99 6 0.79836 57 6 0.81175 59 6 0.884410 153 6 0.837545 92 6 0.795918 26 3 0.71144 92 6 0.81905 131 6 0.70236 118 6 0.79050 181 6 0.780470 97 6 0.728668 70 6 0.52518 107 6 0.583333 11 0 0.52810 62 6 0.812665 156 6 0.822222 93 6 0.74205 77 5 0.83892 96 5 0.812037 50 3 0.614491 113 6 0.850535 0.747096 0.62442 0.84767 0.853121 0.83267 0.76636 0.828293 0.865352 0.76156 0.82439 0.702905 0.803025 0.863226 0.809364 0.61859 0.791571 0.876032 0.850741 0.806360 0.869048 0.893212 0.839095 0.80408 0.82366 0.856161 0.84123 0.925714 0.76994 0.789905 0.829945 0.89487 0.746014 0.747111 0.7063289 0.64000 0.62258 0.775946 0.833630 0.75288 0.850654 0.822111 0.838369 3 0.81100 0.825425 -0.02843810 6 0.77049 0.73288 0.03761119 0.7602302 2.2840e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8790930 0.15506811 insignificant 1 1.000000 insignificant -0.01189346 0.6655945 insignificant 1 insignificant 0.81178 0.711730 0.0999332 6 0.82514 0.640690 0.1844490 2.9389e-07 9.9994e-01 weaklyHypermeth 6.3890e-06 1.0000e+00 weaklyHypermeth 1.3033e-04 0.99999885 weaklyHypermeth 4.0729e-03 1.000000 weaklyHypermeth 0.1339542 5.2887e-02 insignificant 1.0000e+00 insignificant 0.80986 0.780886 -0.00520622 6 0.74181 0.609447 0.1323586 4.6297e-01 3.1529e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7831e-01 5.7267e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0277460 5.7274e-01 insignificant 1.00000000 insignificant 0.827183 0.711730 0.122447 6 0.76199 0.640690 0.1213031 1.7963e-07 0.99990498 weaklyHypermeth 5.2833e-06 1.00000 weaklyHypermeth 9.9309e-05 0.999999 weaklyHypermeth 3.9724e-03 1 weaklyHypermeth 0.1458477 3.9020e-02 weaklyHypermeth 7.9633e-01 insignificant 0.82601 0.780886 0.03385736 6 0.76199 0.609447 0.1525460 1.3640e-01 7.3681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7765e-01 7.8659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03963947 4.1090e-01 insignificant 1.00000000 insignificant 0.712575 0.782710 -0.0851869 6 0.660788 0.696511 -0.0357224 9.2478e-01 1.6759e-04 weaklyHypometh 1.0000e+00 6.2071e-03 weaklyHypometh 9.9816e-01 3.3153e-03 weaklyHypometh 1.00000000 1.2954e-01 insignificant -0.1062082 1.4864e-01 insignificant 1.00000000 insignificant chr3 59439990 59440990 33832 C3orf67 ENSG00000163689 0.93626 180 5 0.814589 179 5 0.74368 114 5 0.934504 167 5 0.61895 108 4 0.89595 231 5 0.632829 73 5 0.69929 114 5 0.700703 134 5 0.58273 93 4 0.72659 161 5 0.56788 106 4 0.724524 110 5 0.676984 36 4 0.685323 118 5 0.55410 118 4 0.518788 73 2 0.891797 216 5 0.500000 70 4 0.846617 165 5 0.680000 22 4 0.879048 41 4 0.81394 90 5 0.93889 29 2 0.75000 21 2 0.938769 212 5 0.750000 17 0 0.935000 29 4 0.67269 79 3 0.91794 198 5 0.88184 146 5 0.95515 246 5 0.845697 138 5 0.420000 48 4 0.99389 341 5 1.000000 5 0 0.89510 115 5 0.830100 157 5 0.956790 175 5 0.85007 104 2 0.97967 104 2 0.622013 114 2 0.965763 194 5 0.926930 0.838634 0.77060 0.93136 0.695063 0.88846 0.62921 0.749250 0.751525 0.64076 0.73526 0.607668 0.793446 0.739077 0.725918 0.60589 0.548032 0.917842 0.686403 0.872421 0.752577 0.925626 0.871603 0.90464 0.81314 0.924805 0.82990 0.949742 0.73324 0.924994 0.915475 0.95269 0.882589 0.644330 0.9952779 1.00000 0.91592 0.796819 0.958445 0.87062 0.967938 0.744991 0.945898 2 0.69953 0.914159 -0.15353287 5 0.69859 0.89848 -0.19989116 0.9990984 1.5336e-08 weaklyHypometh 1.00000 1.5336e-05 weaklyHypometh 0.9898923 0.00012673 weaklyHypometh 1 0.079117 weaklyHypometh -0.13016840 0.0053928 lowCoverage 1 lowCoverage 0.69953 0.893035 -0.1837547 5 0.69859 0.890444 -0.1918558 9.3904e-01 6.9728e-06 weaklyHypometh 1.0000e+00 2.3243e-03 weaklyHypometh 9.9737e-01 0.00024152 weaklyHypometh 1.0000e+00 0.080505 weaklyHypometh -0.1181943 2.4639e-01 lowCoverage 1.0000e+00 lowCoverage 0.69953 0.943560 -0.08351112 2 0.69859 0.903298 -0.2047101 9.9801e-01 6.2916e-05 lowCoverage 1.0000e+00 3.1458e-02 lowCoverage 9.9963e-01 3.5662e-04 lowCoverage 1.0000e+00 1.1887e-01 lowCoverage -0.1622572 7.2306e-02 lowCoverage 1.00000000 lowCoverage 0.914159 0.893035 0.012855 5 0.89848 0.890444 0.0080353 5.0413e-01 0.24799761 insignificant 1.0000e+00 1.00000 insignificant 8.8605e-01 0.197746 insignificant 1.0000e+00 1 insignificant 0.0119741 9.0093e-01 lowCoverage 1.0000e+00 lowCoverage 0.91416 0.943560 -0.00272609 2 0.89848 0.903298 -0.0048190 5.3921e-01 5.4864e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.0373e-01 3.3081e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03208876 6.7965e-01 lowCoverage 1.00000000 lowCoverage 0.893035 0.943560 -0.0175955 2 0.890444 0.903298 -0.0128543 4.7903e-01 7.0749e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5251e-01 6.5587e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0440629 6.9870e-01 lowCoverage 1.00000000 lowCoverage chr3 60491909 60492909 33993 C3orf67 ENSG00000163689 0.84886 416 12 0.669942 235 12 0.75928 157 12 0.779981 288 12 0.85866 119 12 0.76891 379 12 0.756293 148 8 0.76907 175 12 0.761386 157 8 0.81878 140 12 0.86421 392 12 0.69087 62 7 0.786538 202 12 0.870513 44 5 0.829302 207 12 0.72587 84 8 0.764286 94 7 0.792766 303 12 0.777183 169 12 0.853210 332 12 0.835786 95 11 0.909184 72 11 0.76849 190 12 0.81842 91 11 0.81448 63 5 0.854806 217 12 0.856637 145 10 0.888690 59 6 0.83913 166 12 0.81318 224 12 0.73153 211 12 0.85383 488 12 0.788634 148 11 0.813269 177 12 0.61891 228 12 0.792929 92 7 0.67355 89 11 0.757493 233 12 0.839427 411 12 0.86562 378 12 0.81085 302 12 0.780297 311 12 0.814829 292 12 0.833087 0.754601 0.76046 0.84819 0.850968 0.80622 0.77679 0.846186 0.796070 0.84585 0.84143 0.732373 0.824068 0.850420 0.841242 0.83893 0.777032 0.845861 0.815977 0.872012 0.835136 0.877466 0.822200 0.87798 0.83166 0.855402 0.85491 0.891966 0.84593 0.801971 0.841788 0.83235 0.750067 0.810676 0.7210287 0.77691 0.71004 0.785229 0.836639 0.88798 0.827152 0.804502 0.831383 5 0.82386 0.837704 -0.01582190 12 0.76660 0.81955 -0.05295461 0.9829978 1.0983e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9996785 0.01314539 weaklyHypometh 1 1.000000 insignificant -0.04471770 0.0247494 weaklyHypometh 1 insignificant 0.82379 0.747673 0.0718743 12 0.76567 0.696809 0.0688645 1.5227e-05 9.8747e-01 weaklyHypermeth 2.8730e-04 1.0000e+00 weaklyHypermeth 6.2629e-03 0.99391725 weaklyHypermeth 1.2129e-01 1.000000 insignificant 0.0464984 2.1546e-01 insignificant 1.0000e+00 insignificant 0.82536 0.858323 -0.01664155 12 0.81265 0.827401 -0.0147491 9.4092e-01 1.0017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4380e-01 1.8095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0349076 9.3827e-02 insignificant 1.00000000 insignificant 0.837704 0.747412 0.086992 12 0.81955 0.678975 0.1405758 7.3674e-06 0.99999383 weaklyHypermeth 1.7542e-04 1.00000 weaklyHypermeth 2.9912e-04 1.000000 weaklyHypermeth 9.0643e-03 1 weaklyHypermeth 0.0912161 3.3236e-02 weaklyHypermeth 7.3859e-01 insignificant 0.83831 0.858323 0.00016459 12 0.83464 0.827401 0.0072396 6.2656e-01 6.4621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7319e-02 9.9553e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00981013 6.3371e-01 insignificant 1.00000000 insignificant 0.748958 0.858323 -0.0856946 12 0.753547 0.827401 -0.0738539 9.9934e-01 1.0120e-04 weaklyHypometh 1.0000e+00 4.0480e-03 weaklyHypometh 9.9793e-01 5.9330e-03 weaklyHypometh 1.00000000 1.7537e-01 insignificant -0.0814060 5.1786e-02 insignificant 1.00000000 insignificant chr3 61388229 61389229 34142 ENSG00000201991 0.5587868 127 5 0.6639940 108 5 0.704762 30 5 0.7988417 138 5 0.8194444 20 0 0.7001190 73 5 0.5392256 53 5 0.8386325 54 5 0.604762 27 3 0.7355556 39 5 0.7506326 139 5 0.633333 17 0 0.8727778 36 5 0.777778 39 5 0.7957143 29 4 0.666667 11 0 NA 0 0 0.6749304 128 3 0.800000 35 5 0.775000 64 5 0.750000 17 3 NA 0 0 0.7860195 46 3 0.698413 40 5 0.78263 68 5 0.766118 109 5 1.000000 3 0 0.583333 10 0 0.7431159 77 3 0.6285812 82 5 0.7579762 75 5 0.70629 61 5 0.731602 93 5 0.7019608 63 5 0.7357509 55 5 0.633333 14 0 0.568254 34 5 0.72778 51 5 0.7323077 96 5 0.791648 131 5 0.6650849 108 5 0.825000 30 3 0.769251 94 5 0.701844 0.6781876 0.791980 0.7917090 0.899123 0.713972 0.670707 0.848403 0.637845 0.7783626 0.7903061 0.754386 0.895760 0.80234 0.8022556 0.7192982 NA 0.749890 0.8270677 0.8026316 0.949359 NA 0.714768 0.717210 0.745568 0.7758514 0.949359 0.684211 0.7146262 0.787130 0.755232 0.699669 0.770905 0.7131063 0.745132 0.596491 0.5973266 0.786550 0.695142 0.786582 0.6940297 0.769737 0.811216 0 0.738646 0.739796 -6.1281e-05 5 0.639594 0.657544 -0.0179501 0.195436 0.225771 insignificant 1 1 insignificant 0.41509 0.095710 insignificant 1 1 insignificant -0.0240509 0.54070 lowCoverage 1 lowCoverage 0.740964 0.709677 0.023408 5 0.727513 0.703254 0.0242590 3.3265e-03 5.3330e-01 weaklyHypermeth 1.2320e-01 1.0000e+00 insignificant 9.6492e-03 9.2456e-01 weaklyHypermeth 5.6757e-01 1.000000 insignificant 0.038516 0.29648639 lowCoverage 1.00000 lowCoverage 0.740964 0.736383 0.0074505 5 0.727513 0.731509 -0.0039959 0.619439 0.60462845 insignificant 1 1.00000 insignificant 0.505800 0.469330 insignificant 1 1 insignificant -0.035029 0.340761 lowCoverage 1 lowCoverage 0.743151 0.709677 0.024521 5 0.739053 0.703254 0.0357992 5.7566e-04 5.3120e-01 weaklyHypermeth 2.7412e-02 1.000000 weaklyHypermeth 2.4608e-03 0.9359979 weaklyHypermeth 1.6405e-01 1 insignificant 0.0625671 0.16082243 lowCoverage 1.00000 lowCoverage 0.743151 0.736383 0.0046959 5 0.739053 0.731509 0.00754423 0.2633064 0.301725 insignificant 1.00000 1 insignificant 0.4661501 0.538438 insignificant 1 1 insignificant -0.0109783 0.798337 lowCoverage 1 lowCoverage 0.709677 0.736383 -0.0248450 5 0.703254 0.731509 -0.028255 0.5202635 4.7928e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.7651081 7.4787e-02 insignificant 1 1.0000000 insignificant -0.0735454 0.09245814 lowCoverage 1.00000 lowCoverage chr3 62430288 62431288 34343 FEZF2 ENSG00000153266 0.5666594 112 6 0.5453824 132 6 0.496599 30 4 0.6111111 69 4 0.6214286 44 3 0.4399573 106 6 0.5423280 55 4 0.5955279 79 6 0.495238 27 4 0.5535714 36 4 0.6292648 105 5 0.416667 15 0 0.6250000 49 4 0.529701 51 4 0.5625000 52 6 0.541667 17 2 0.200000 10 2 0.5895990 110 5 0.575855 43 4 0.714181 68 6 0.829630 22 1 0.500000 6 0 0.6719577 43 6 0.532051 36 2 0.69444 57 4 0.529232 102 6 0.497024 27 2 0.562500 16 0 0.6119769 97 6 0.5453606 93 4 0.6122449 77 4 0.59573 51 4 0.334162 94 6 0.5059524 54 4 0.4344548 94 6 0.576389 24 2 0.489418 60 4 0.51996 88 4 0.6573671 67 5 0.568402 79 6 0.6679807 107 6 0.575758 56 2 0.599584 93 6 0.605558 0.5755608 0.470418 0.6641414 0.590909 0.475427 0.576479 0.653171 0.577922 0.5746753 0.6099664 0.479798 0.626082 0.53866 0.6231061 0.5985559 0.529713 0.631935 0.6355866 0.6852738 0.707071 0.508473 0.711881 0.645959 0.727273 0.5660019 0.562771 0.590909 0.5447913 0.583218 0.601443 0.628399 0.527693 0.5315657 0.461480 0.527778 0.4980760 0.564946 0.666557 0.582228 0.7308980 0.637741 0.583874 0 0.599174 0.640449 -3.9222e-02 4 0.622612 0.665880 -0.0432678 0.996446 0.136888 lowCoverage 1 1 lowCoverage 0.97429 0.252117 lowCoverage 1 1 lowCoverage -0.0559005 0.13700 lowCoverage 1 lowCoverage 0.599174 0.536408 0.075815 6 0.622612 0.370901 0.2517111 9.3051e-03 9.8671e-01 weaklyHypermeth 2.9079e-01 1.0000e+00 insignificant 2.8378e-02 9.8330e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.065890 0.14212576 lowCoverage 1.00000 lowCoverage 0.598510 0.661692 -0.0521729 6 0.568700 0.673884 -0.1051848 0.977521 0.01880250 weaklyHypometh 1 1.00000 insignificant 0.984596 0.081338 insignificant 1 1 insignificant -0.071206 0.037483 lowCoverage 1 lowCoverage 0.641148 0.533816 0.114694 4 0.682704 0.296721 0.3859831 1.5714e-02 1.0000e+00 lowCoverage 5.2380e-01 1.000000 lowCoverage 4.1595e-02 0.9999948 lowCoverage 1.0000e+00 1 lowCoverage 0.1217903 0.01758369 lowCoverage 1.00000 lowCoverage 0.639871 0.661692 -0.0104694 4 0.618149 0.673884 -0.05573584 0.7208833 0.305066 lowCoverage 1.00000 1 lowCoverage 0.6710019 0.566179 lowCoverage 1 1 lowCoverage -0.0153059 0.664891 lowCoverage 1 lowCoverage 0.537713 0.661692 -0.1276860 6 0.423887 0.673884 -0.249997 0.9971305 1.4846e-03 weaklyHypometh 1 9.2786e-02 weaklyHypometh 0.9871164 1.2609e-02 weaklyHypometh 1 0.9699372 insignificant -0.1370962 0.00887409 lowCoverage 1.00000 lowCoverage chr3 64228494 64229494 34471 PRICKLE2 ENSG00000163637 0.0068343 873 12 0.0061169 643 12 0.019522 676 16 0.0040414 695 12 0.0246059 434 18 0.0099196 1000 13 0.0093666 711 17 0.0466114 664 17 0.017290 801 17 0.0030729 673 12 0.0035885 488 18 0.025602 649 18 0.0047727 569 15 NA 0 0 0.0025303 761 15 0.006601 554 17 0.025186 1167 18 0.0076515 704 12 0.084347 371 12 0.023850 766 16 0.066065 249 13 0.090327 494 12 0.0098723 576 12 0.017804 340 14 0.00000 285 11 0.029535 801 18 0.031098 444 14 0.038743 139 10 0.0033157 545 12 0.0050966 799 12 0.0616487 836 17 0.00000 821 12 0.064645 521 12 0.0069641 373 12 0.1000000 255 5 0.066667 234 12 0.006809 190 11 0.03291 789 16 0.0307126 1154 12 0.041879 874 12 0.0065094 886 12 0.066530 801 12 0.029144 748 12 0.010570 0.0093653 0.028811 0.0049983 0.019135 0.014451 0.011331 0.022282 0.010800 0.0047616 0.0053031 0.017916 0.010258 NA 0.0039055 0.0079674 0.012263 0.010791 0.0069377 0.0045142 0.036869 0.015032 0.013482 0.010195 0.000000 0.0096186 0.012771 0.022314 0.0049065 0.010002 0.012749 0.000000 0.092465 0.0086601 0.057401 0.000000 0.0093376 0.011575 0.045585 0.022950 0.0065767 0.018947 0.038640 12 0.012198 0.013114 -4.0602e-04 12 0.019874 0.034510 -0.0146350 0.976269 0.800682 insignificant 1 1 insignificant 0.74310 0.960070 insignificant 1 1 insignificant -0.0120109 0.23254 insignificant 1 insignificant 0.012198 0.031329 -0.019146 12 0.019874 0.032354 -0.0124796 9.9998e-01 4.9043e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5308e-01 9.7891e-01 insignificant 1.0000e+00 1.000000 insignificant -0.028884 0.11897444 insignificant 1.00000 insignificant 0.012198 0.030025 -0.0174374 12 0.019874 0.047631 -0.0277561 0.983420 0.00022872 weaklyHypometh 1 0.22872 insignificant 0.995783 0.064089 insignificant 1 1 insignificant -0.017507 0.156322 insignificant 1 insignificant 0.013114 0.031329 -0.018807 12 0.034510 0.032354 0.0021554 9.9611e-01 3.3326e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6897e-01 0.9422132 insignificant 1.0000e+00 1 insignificant -0.0168736 0.36063420 insignificant 1.00000 insignificant 0.013114 0.030025 -0.0171729 12 0.034510 0.047631 -0.01312110 0.9823257 0.038724 weaklyHypometh 1.00000 1 insignificant 0.9996411 0.060189 insignificant 1 1 insignificant -0.0054961 0.680950 insignificant 1 insignificant 0.031329 0.030025 0.0024132 12 0.032354 0.047631 -0.015276 0.9950852 6.4441e-01 insignificant 1 1.0000e+00 insignificant 0.9998287 2.9524e-01 insignificant 1 1.0000000 insignificant 0.0113775 0.54569665 insignificant 1.00000 insignificant chr3 65558073 65559073 34583 ENSG00000203649 0.0126935 391 9 0.0939864 522 12 0.105939 701 11 0.0388889 339 6 0.0053875 482 10 0.0157104 644 10 0.0866781 609 9 0.0060606 531 9 0.057259 554 10 0.0255478 596 10 0.0756921 568 10 0.028784 629 10 0.0391980 439 9 0.012532 241 6 0.1704704 700 9 0.036917 548 10 0.047091 385 6 0.0076137 375 6 0.017016 478 9 0.067595 541 12 0.017949 201 8 0.022534 196 5 0.0660129 404 10 0.079710 211 9 0.13126 148 5 0.090461 743 11 0.034428 454 9 0.006536 224 8 0.0302611 427 9 0.0942053 789 11 0.0051144 646 10 0.12316 562 12 0.028277 359 11 0.0914932 337 9 0.0085763 241 10 0.000000 51 3 0.160648 286 9 0.10356 538 11 0.0088384 562 9 0.026879 398 9 0.0329234 343 6 0.032965 329 9 0.022416 243 8 0.020020 0.0224304 0.023322 0.0287373 0.013932 0.037212 0.038209 0.013159 0.023033 0.0182866 0.0281306 0.023118 0.029634 0.01661 0.0091869 0.0487797 0.046914 0.016753 0.0355354 0.0615961 0.036842 0.043633 0.047624 0.038619 0.042655 0.0212177 0.030092 0.019352 0.0564068 0.018882 0.013401 0.045623 0.027768 0.0827662 0.018621 0.010338 0.1227085 0.054876 0.019190 0.056031 0.0252104 0.048186 0.066734 5 0.020831 0.023776 -2.3272e-03 9 0.078939 0.044067 0.0348719 0.585274 0.991493 insignificant 1 1 insignificant 0.84563 0.973876 insignificant 1 1 insignificant -0.0109159 0.50329 insignificant 1 insignificant 0.020837 0.058499 -0.035958 9 0.093740 0.099956 -0.0062159 9.8955e-01 6.1544e-08 weaklyHypometh 1.0000e+00 6.1544e-05 weaklyHypometh 9.7579e-01 1.6064e-03 weaklyHypometh 1.0000e+00 0.535483 insignificant -0.017873 0.53919239 insignificant 1.00000 insignificant 0.020454 0.027200 -0.0087433 9 0.031240 0.027056 0.0041839 0.260679 0.46746818 insignificant 1 1.00000 insignificant 0.469337 0.930102 insignificant 1 1 insignificant 0.022749 0.040279 weaklyHypermeth 1 insignificant 0.023833 0.058499 -0.033287 9 0.052330 0.099956 -0.0476263 9.9819e-01 4.2446e-05 weaklyHypometh 1.0000e+00 0.042446 weaklyHypometh 9.9473e-01 0.0149870 weaklyHypometh 1.0000e+00 1 insignificant -0.0069571 0.81637806 insignificant 1.00000 insignificant 0.023428 0.027200 -0.0073754 9 0.027330 0.027056 0.00027349 0.9077350 0.717877 insignificant 1.00000 1 insignificant 0.8332859 0.981113 insignificant 1 1 insignificant 0.0336646 0.028483 weaklyHypermeth 1 insignificant 0.058531 0.027215 0.0278565 9 0.106620 0.028860 0.077760 0.0113947 9.9995e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0711496 9.9998e-01 insignificant 1 1.0000000 insignificant 0.0406218 0.17934736 insignificant 1.00000 insignificant chr3 65914446 65915446 34609 ENSG00000203648 0.8739448 270 6 0.7368266 155 6 0.696171 118 6 0.7452223 261 6 0.7522096 82 6 0.8685967 367 6 0.7464646 78 6 0.9149895 145 6 0.780950 134 6 0.8420675 165 6 0.7976593 175 6 0.866071 69 6 0.8437432 249 6 0.890873 77 6 0.8257852 147 6 0.883333 66 6 0.833333 16 0 0.7535447 411 6 0.826160 102 6 0.873837 212 6 0.850926 50 6 0.834544 105 6 0.8679417 126 6 0.813757 65 3 0.84542 82 6 0.921426 204 6 0.826315 81 6 0.707937 46 6 0.8382337 150 6 0.8654930 272 6 0.8964987 197 6 0.83682 314 6 0.444134 264 6 0.5730994 98 6 0.1665786 207 6 0.222222 18 2 0.493836 117 6 0.21646 315 6 0.8714479 320 6 0.746973 219 6 0.8295468 327 6 0.702612 286 6 0.707976 235 6 0.867594 0.7257655 0.686586 0.7418655 0.754705 0.868006 0.727864 0.908990 0.780615 0.8350131 0.7918500 0.866538 0.834941 0.88784 0.8236219 0.8806039 0.822300 0.739358 0.8199019 0.8647630 0.842509 0.820129 0.865895 0.789857 0.837501 0.9134963 0.816277 0.704530 0.8359978 0.857383 0.890583 0.837270 0.421137 0.5299468 0.156712 0.399087 0.4719180 0.202553 0.856186 0.729012 0.8175985 0.697819 0.681672 6 0.811155 0.850473 -3.5330e-02 6 0.816216 0.851654 -0.0354379 0.998716 0.025211 weaklyHypometh 1 1 insignificant 0.88906 0.019287 weaklyHypometh 1 1 insignificant -0.0245205 0.24167 insignificant 1 insignificant 0.811155 0.351325 0.500222 6 0.816216 0.332785 0.4834314 9.7134e-37 1.0000e+00 hypermethylated 9.7134e-34 1.0000e+00 hypermethylated 5.7741e-10 9.9903e-01 hypermethylated 5.7741e-07 1.000000 hypermethylated 0.464868 0.00094846 hypermethylated 0.31615 insignificant 0.811155 0.739005 0.0456193 6 0.816216 0.786766 0.0294504 0.039142 0.57281754 weaklyHypermeth 1 1.00000 insignificant 0.051908 0.700075 insignificant 1 1 insignificant 0.045878 0.259812 insignificant 1 insignificant 0.850473 0.351325 0.508169 6 0.851654 0.332785 0.5188693 2.6862e-28 1.0000e+00 hypermethylated 2.6862e-25 1.000000 hypermethylated 1.0302e-08 0.9994217 hypermethylated 1.0302e-05 1 hypermethylated 0.4893881 0.00071383 hypermethylated 0.35692 insignificant 0.850473 0.739005 0.0678500 6 0.851654 0.786766 0.06488831 0.0038391 0.947128 weaklyHypermeth 0.76782 1 insignificant 0.0050559 0.908492 weaklyHypermeth 1 1 insignificant 0.0703985 0.107997 insignificant 1 insignificant 0.351325 0.739005 -0.4619369 6 0.332785 0.786766 -0.453981 0.9999998 5.6052e-14 hypomethylated 1 2.8026e-11 hypomethylated 0.9998456 6.5261e-06 hypomethylated 1 0.0065261 hypomethylated -0.4189896 0.00096695 hypomethylated 0.48347 insignificant chr3 65920529 65921529 34610 ENSG00000203648 0.9035014 84 2 0.8319862 138 5 0.760204 49 2 0.8475694 107 5 0.7426304 42 5 0.6234694 111 5 0.6985158 40 5 0.7876956 85 5 0.741837 51 1 0.9928571 34 2 0.8628639 149 5 0.583333 16 0 0.5907407 75 4 0.778166 39 3 0.9764706 33 2 0.755556 18 1 0.875000 6 0 0.7527699 105 2 0.792000 35 1 0.896803 86 3 0.728571 16 1 1.000000 8 0 0.8753086 54 3 0.698572 68 5 0.73893 64 5 0.668851 108 5 0.773810 45 5 0.933333 13 0 0.6843826 83 3 0.8834227 136 5 0.8636364 105 5 0.81538 130 5 0.803869 112 5 0.7744792 40 4 0.8436370 218 5 0.800000 18 3 0.549988 96 5 0.79138 139 5 0.8060256 99 5 0.756667 120 5 0.7917021 98 5 0.677083 52 1 0.781587 120 5 0.891569 0.8127294 0.660714 0.8941667 0.825397 0.855714 0.787446 0.860190 0.902143 0.9800000 0.8566927 0.716667 0.839444 0.89006 0.8728508 0.8754652 NA 0.825356 0.8840000 0.8660969 0.790000 0.985995 0.870370 0.761655 0.736071 0.8662943 0.863889 0.966667 0.8610896 0.887171 0.931818 0.839279 0.733599 0.5883333 0.786822 0.778348 0.5179415 0.874139 0.873686 0.784762 0.8284043 0.691781 0.867143 0 0.848578 0.843373 -1.7085e-02 5 0.755250 0.749164 0.0060864 0.023875 0.367246 inconclusive 1 1 insignificant 0.33150 0.511818 insignificant 1 1 insignificant -0.0156513 0.69792 lowCoverage 1 lowCoverage 0.849115 0.760835 0.070661 5 0.787156 0.835794 -0.0486378 3.7789e-01 7.9087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7106e-01 8.4098e-01 insignificant 1.0000e+00 1.000000 insignificant 0.029139 0.57500390 lowCoverage 1.00000 lowCoverage 0.850242 0.793456 0.0412471 5 0.784450 0.767470 0.0169800 0.229605 0.58947427 insignificant 1 1.00000 insignificant 0.258288 0.882694 insignificant 1 1 insignificant 0.027085 0.439849 lowCoverage 1 lowCoverage 0.843185 0.760835 0.079151 5 0.717809 0.835794 -0.1179850 8.3879e-02 3.9418e-01 insignificant 1.0000e+00 1.000000 insignificant 1.1698e-01 0.6981034 insignificant 1.0000e+00 1 insignificant 0.0447903 0.41719945 lowCoverage 1.00000 lowCoverage 0.849568 0.793456 0.0598741 5 0.815161 0.767470 0.04769120 0.1008196 0.927386 insignificant 1.00000 1 insignificant 0.2814170 0.966601 insignificant 1 1 insignificant 0.0427368 0.282759 lowCoverage 1 lowCoverage 0.757329 0.793456 -0.0299250 5 0.737270 0.767470 -0.030199 0.8912880 3.1176e-01 insignificant 1 1.0000e+00 insignificant 0.8819149 3.4112e-01 insignificant 1 1.0000000 insignificant -0.0020535 0.96754644 lowCoverage 1.00000 lowCoverage chr3 65956634 65957634 34611 ENSG00000203648 0.8508398 282 5 0.6767215 196 5 0.488959 132 5 0.7002562 158 5 0.6402198 38 5 0.7988562 257 5 0.7046685 52 5 0.7238522 152 5 0.656377 102 5 0.7562797 80 5 0.7336597 196 5 0.235238 42 4 0.8443153 157 5 NA 0 0 0.7737374 90 5 0.375824 42 5 0.602778 28 2 0.7446910 156 5 0.913700 109 5 0.907849 230 5 0.699412 64 5 0.830427 79 5 0.8012866 125 5 0.834048 73 5 0.65487 64 5 0.835391 237 5 0.698542 76 5 0.429167 34 3 0.8609559 122 5 0.8255128 198 5 0.8658744 195 5 0.82813 300 5 0.814455 174 5 0.9916667 68 5 0.8000000 246 5 0.576667 24 3 0.902000 65 5 0.94620 167 5 0.8814408 128 5 0.850225 194 5 0.8183709 136 5 0.706209 141 5 0.865478 188 5 0.856286 0.7027899 0.500672 0.7031207 0.637080 0.803062 0.714467 0.711726 0.670645 0.7730941 0.7261740 0.228597 0.841742 NA 0.7719200 0.3583138 0.590240 0.750457 0.9140276 0.9104967 0.750964 0.820158 0.790650 0.844035 0.688904 0.8311715 0.721309 0.481805 0.8543066 0.828013 0.869194 0.814656 0.830356 0.9929417 0.852459 0.623406 0.9177596 0.957155 0.871835 0.859572 0.8205521 0.692709 0.848779 4 0.746299 0.810466 -6.3515e-02 5 0.748317 0.808828 -0.0605112 0.993187 0.011370 weaklyHypometh 1 1 insignificant 0.99775 0.012337 weaklyHypometh 1 1 insignificant -0.0726439 0.18769 lowCoverage 1 lowCoverage 0.746299 0.870968 -0.122960 5 0.748317 0.845522 -0.0972047 9.6568e-01 1.1009e-04 weaklyHypometh 1.0000e+00 5.5045e-02 weaklyHypometh 9.9977e-01 3.5629e-05 weaklyHypometh 1.0000e+00 0.035629 weaklyHypometh -0.147508 0.06932161 lowCoverage 1.00000 lowCoverage 0.746299 0.820839 -0.0786064 5 0.748317 0.832376 -0.0840590 0.997830 0.02875040 weaklyHypometh 1 1.00000 insignificant 0.999629 0.008342 weaklyHypometh 1 1 insignificant -0.133354 0.016912 lowCoverage 1 lowCoverage 0.810466 0.870968 -0.058674 5 0.808828 0.845522 -0.0366935 9.1584e-01 3.5064e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.7473e-01 0.0056052 weaklyHypometh 1.0000e+00 1 insignificant -0.0748636 0.31752398 lowCoverage 1.00000 lowCoverage 0.810466 0.820839 -0.0143559 5 0.808828 0.832376 -0.02354778 0.8395549 0.332053 insignificant 1.00000 1 insignificant 0.9363821 0.306014 insignificant 1 1 insignificant -0.0607102 0.228555 lowCoverage 1 lowCoverage 0.870968 0.820839 0.0465712 5 0.845522 0.832376 0.013146 0.0229116 7.9949e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0207552 9.5189e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0141534 0.84098145 lowCoverage 1.00000 lowCoverage chr3 67653587 67654587 34746 KBTBD8 ENSG00000163376 0.9576614 198 5 0.8607143 60 5 0.828571 62 5 0.9369186 218 5 0.9047619 23 2 0.9081154 182 5 0.9600000 36 5 0.8539130 70 3 0.849750 63 5 0.9000000 27 3 0.9642567 115 5 0.957143 47 5 0.9020796 67 5 NA 0 0 0.9651515 47 5 0.866667 41 5 0.761818 43 4 0.9263765 159 5 0.931429 51 4 0.923497 196 5 0.650000 18 1 0.890659 70 5 0.8269327 81 5 0.935714 58 5 0.94667 41 5 0.959253 88 5 0.901587 69 5 0.933333 14 0 0.8770238 52 4 0.9550000 78 5 0.9636364 56 5 0.97174 179 5 0.960000 54 5 0.9800000 49 5 1.0000000 157 3 1.000000 38 5 0.961667 60 5 0.93690 80 5 0.9663933 258 5 0.941478 183 5 0.9661862 208 5 0.889757 165 5 0.952052 268 5 0.959480 0.8681949 0.841795 0.9330311 0.910665 0.911300 0.975207 0.874865 0.868693 0.9173554 0.9708023 0.957497 0.919506 NA 0.9749562 0.8898072 0.798397 0.933449 0.9338843 0.9376457 0.628099 0.888611 0.850690 0.940968 0.947658 0.9673475 0.896497 0.958678 0.8661452 0.962293 0.973704 0.981365 0.958678 0.9785124 0.989463 1.000000 0.9679752 0.932113 0.966084 0.946047 0.9622579 0.894763 0.955807 3 0.920235 0.925373 -4.8112e-03 5 0.917267 0.922017 -0.0047498 0.829710 0.423453 insignificant 1 1 insignificant 0.88834 0.195752 insignificant 1 1 insignificant 0.0021340 0.94182 lowCoverage 1 lowCoverage 0.920235 0.977169 -0.049691 5 0.917267 0.974089 -0.0568218 9.9662e-01 2.6399e-04 weaklyHypometh 1.0000e+00 8.7996e-02 weaklyHypometh 9.9899e-01 5.7475e-04 weaklyHypometh 1.0000e+00 0.287375 insignificant -0.069999 0.00034217 lowCoverage 0.17109 lowCoverage 0.920235 0.946396 -0.0256532 5 0.917267 0.946898 -0.0296310 0.949402 0.06288601 insignificant 1 1.00000 insignificant 0.906232 0.066720 insignificant 1 1 insignificant -0.040077 0.057002 lowCoverage 1 lowCoverage 0.925373 0.977169 -0.046168 5 0.922017 0.974089 -0.0520720 9.8025e-01 1.5903e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9635e-01 0.0225403 weaklyHypometh 1.0000e+00 1 insignificant -0.0721332 0.02147707 lowCoverage 1.00000 lowCoverage 0.925373 0.946396 -0.0203895 5 0.922017 0.946898 -0.02488126 0.8264519 0.198758 insignificant 1.00000 1 insignificant 0.3951297 0.338182 insignificant 1 1 insignificant -0.0422112 0.173623 lowCoverage 1 lowCoverage 0.977169 0.946396 0.0322120 5 0.974089 0.946898 0.027191 0.0033848 9.3235e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0086543 9.9921e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0299220 0.12640458 lowCoverage 1.00000 lowCoverage chr3 68435412 68436412 34849 ENSG00000214552 0.7619062 199 6 0.6649573 39 3 0.507937 22 3 0.7690879 170 6 1.0000000 3 0 0.8007055 158 6 0.6250000 22 2 0.8916667 41 4 0.763889 13 0 0.9687500 25 3 0.8263889 90 6 0.683333 20 3 0.6787524 67 3 NA 0 0 0.6964286 28 3 0.666667 3 0 0.666667 6 0 0.8120293 181 6 0.776786 66 6 0.805452 105 6 0.933333 15 3 0.750000 19 3 0.7920737 68 6 0.944444 18 3 1.00000 35 3 0.785568 93 6 1.000000 48 3 0.635714 21 3 0.7075964 38 5 0.8435571 139 6 0.7490503 127 6 0.79394 191 6 0.829678 58 3 0.7397436 53 5 0.7133547 85 6 0.566667 20 3 0.583333 15 0 0.80677 121 6 0.7928662 147 6 0.825624 213 6 0.8797337 161 6 0.823677 112 6 0.803575 172 6 0.890479 0.9410256 0.682540 0.8923425 1.000000 0.830688 0.833333 1.000000 1.000000 0.9583333 0.9861111 0.866667 0.857505 NA 0.9583333 NA NA 0.893289 1.0000000 0.9351852 0.933333 0.666667 0.898962 0.944444 1.000000 0.9285714 1.000000 0.771429 0.7566138 0.927855 0.944444 0.922641 0.881579 0.8461538 0.762821 0.944444 0.8333333 0.867102 0.936160 0.963446 0.9122451 0.914021 0.940484 0 0.825914 0.807882 -2.2917e-03 6 0.740926 0.776336 -0.0354100 0.792334 0.532657 insignificant 1 1 insignificant 0.69704 0.831964 insignificant 1 1 insignificant -0.0718138 0.11223 lowCoverage 1 lowCoverage 0.825914 0.789773 0.022616 6 0.740926 0.659345 0.0815807 7.8086e-02 7.2838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2477e-01 9.6303e-01 insignificant 1.0000e+00 1.000000 insignificant 0.049536 0.37204169 lowCoverage 1.00000 lowCoverage 0.826433 0.875776 -0.0392224 6 0.781080 0.826712 -0.0456319 0.994543 0.06016399 insignificant 1 1.00000 insignificant 0.867660 0.337630 insignificant 1 1 insignificant -0.068969 0.037446 lowCoverage 1 lowCoverage 0.807882 0.789773 0.023424 6 0.776336 0.659345 0.1169907 7.8158e-02 7.2730e-01 insignificant 1.0000e+00 1.000000 insignificant 3.0160e-01 0.9719354 insignificant 1.0000e+00 1 insignificant 0.1213499 0.05542830 lowCoverage 1.00000 lowCoverage 0.808168 0.875776 -0.0411626 6 0.780725 0.826712 -0.04598684 0.9925906 0.090816 insignificant 1.00000 1 insignificant 0.9659136 0.256740 insignificant 1 1 insignificant 0.0028449 0.939952 lowCoverage 1 lowCoverage 0.792023 0.875776 -0.0613819 6 0.769236 0.826712 -0.057476 0.9631268 1.2093e-02 weaklyHypometh 1 4.4788e-01 insignificant 0.9917530 1.0455e-01 insignificant 1 1.0000000 insignificant -0.1185049 0.04656921 lowCoverage 1.00000 lowCoverage chr3 69374545 69375545 34932 ENSG00000210965 0.7626210 216 8 0.6129979 209 8 0.583897 126 8 0.6668290 133 8 0.6280525 93 8 0.6982140 412 8 0.4817575 120 8 0.7767399 134 8 0.504505 108 8 0.6274038 69 6 0.6099344 235 8 0.468056 90 6 0.6800228 82 8 0.809829 44 4 0.7281602 85 6 0.540939 86 5 0.558983 60 5 0.6879505 171 8 0.692052 201 6 0.699567 309 8 0.588889 58 6 0.635385 86 6 0.7386282 138 8 0.728075 80 8 0.61667 53 6 0.628015 254 8 0.561991 105 8 0.646023 43 4 0.6652868 105 8 0.6974772 219 8 0.5921839 203 8 0.61242 394 8 0.680309 161 8 0.4625849 110 8 0.6523752 186 6 0.579365 33 4 0.707666 91 7 0.58140 212 8 0.7688763 167 8 0.684065 154 8 0.6658905 157 8 0.529047 155 6 0.790356 168 8 0.748432 0.6204917 0.640561 0.7331524 0.579821 0.729252 0.570327 0.789274 0.560776 0.7156764 0.6004926 0.630887 0.710018 0.69985 0.7316567 0.6306151 0.651548 0.667673 0.6522213 0.7064360 0.679975 0.697305 0.736615 0.734482 0.621269 0.6353927 0.615639 0.643436 0.6387825 0.713138 0.624881 0.691703 0.676472 0.5924695 0.591925 0.600268 0.7194816 0.583208 0.739286 0.687048 0.7185707 0.681033 0.783308 5 0.678176 0.693326 -7.8940e-03 8 0.692570 0.589157 0.1034133 0.785772 0.122453 insignificant 1 1 insignificant 0.46992 0.162540 insignificant 1 1 insignificant -0.0016616 0.95129 insignificant 1 insignificant 0.677960 0.627995 0.051813 8 0.654141 0.606365 0.0477763 2.1053e-02 9.9334e-01 weaklyHypermeth 6.1921e-01 1.0000e+00 insignificant 1.9622e-01 9.0907e-01 insignificant 1.0000e+00 1.000000 insignificant 0.030309 0.49291169 insignificant 1.00000 insignificant 0.678176 0.722846 -0.0500935 8 0.692570 0.738337 -0.0457673 0.999038 0.04530523 weaklyHypometh 1 1.00000 insignificant 0.999073 0.030423 weaklyHypometh 1 1 insignificant -0.046721 0.396344 insignificant 1 insignificant 0.694124 0.627995 0.060040 8 0.662801 0.606365 0.0564364 9.0911e-04 9.9415e-01 weaklyHypermeth 3.9527e-02 1.000000 weaklyHypermeth 2.0189e-01 0.9306358 insignificant 1.0000e+00 1 insignificant 0.0319705 0.44790846 insignificant 1.00000 insignificant 0.693326 0.722846 -0.0476743 8 0.589157 0.738337 -0.14918062 0.9958564 0.067677 insignificant 1.00000 1 insignificant 0.9834459 0.081527 insignificant 1 1 insignificant -0.0450599 0.399578 insignificant 1 insignificant 0.627995 0.722500 -0.1048926 8 0.606365 0.705630 -0.099265 0.9998434 4.3450e-04 weaklyHypometh 1 4.7368e-02 weaklyHypometh 0.9976783 1.7306e-02 weaklyHypometh 1 1.0000000 insignificant -0.0770304 0.22687795 insignificant 1.00000 insignificant chr3 71092019 71093019 35256 ENSG00000221382 0.833159 309 8 0.7760201 153 8 0.7486266 142 8 0.8629788 168 8 0.843056 64 6 0.786914 243 8 0.721871 114 8 0.8381410 155 8 0.7048485 85 8 0.8970975 89 5 0.8210740 259 8 0.8975694 42 3 0.8356838 106 8 0.714286 32 4 0.7310448 123 8 0.56875 89 5 0.85764 78 5 0.8159653 200 8 0.8019639 137 8 0.799836 299 8 0.9182692 37 3 0.867510 108 8 0.775289 207 8 0.809091 66 8 0.89048 58 8 0.8231421 189 8 0.7620533 117 8 0.80247 47 3 0.776410 141 8 0.8234029 171 8 0.790886 196 8 0.7788454 446 8 0.79096 128 6 0.765812 135 8 0.741892 121 5 0.64377 77 5 0.843750 93 8 0.81644 200 8 0.8209520 209 8 0.896599 300 8 0.890441 253 8 0.8221361 262 8 0.875524 231 8 0.872767 0.8375268 0.820827 0.904953 0.87427 0.848794 0.821358 0.8610960 0.7890085 0.860482 0.882685 0.890507 0.874658 0.861333 0.776336 0.77840 0.84214 0.866013 0.8376699 0.851892 0.8960045 0.921558 0.850496 0.805178 0.92020 0.8231833 0.8144445 0.81553 0.824042 0.8720858 0.835148 0.8713367 0.83723 0.844278 0.5810311 0.81393 0.88188 0.862786 0.872852 0.934735 0.93041 0.8969016 0.902274 3 0.836452 0.844295 -1.0879e-02 8 0.8399799 0.852867 -0.0128874 0.98636 0.519285 insignificant 1 1 insignificant 0.97866 0.489147 insignificant 1 1 insignificant -0.0253276 0.27088 insignificant 1 insignificant 0.836162 0.791722 0.018083 8 0.7636181 0.841777 -0.078159 2.5720e-01 8.8832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2623e-01 9.2122e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0257221 0.463402 insignificant 1 insignificant 0.836282 0.908367 -0.0639246 8 0.7999748 0.87089 -0.0709107 0.9999994 4.0189e-05 weaklyHypometh 1.000000 0.036120 weaklyHypometh 0.999993 0.00035839 weaklyHypometh 1 0.35839 insignificant -0.0683043 0.012907 weaklyHypometh 1 insignificant 0.844083 0.792553 0.030560 8 0.835723 0.854963 -0.019240 1.2691e-01 9.7245e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.0076e-01 0.97995305 insignificant 1.0000e+00 1.000000 insignificant 0.051050 0.152309 insignificant 1 insignificant 0.844032 0.908367 -0.05325702 8 0.8160841 0.87089 -0.0548015 0.9999057 0.011985 weaklyHypometh 1.00000 1 insignificant 0.9970573 0.086615 insignificant 1.0000 1 insignificant -0.04297675 0.077223 insignificant 1 insignificant 0.790040 0.908367 -0.086766 8 0.78244 0.87089 -0.088442 0.9999855 3.9430e-05 weaklyHypometh 1.00000 6.5717e-03 weaklyHypometh 0.999938 4.0246e-03 weaklyHypometh 1 0.670772 insignificant -0.094026 0.022452 weaklyHypometh 1 insignificant chr3 71163767 71164767 35287 ENSG00000221382 0.937875 273 5 0.8887942 120 5 0.7201021 112 5 0.9591569 262 5 0.797802 47 5 0.908248 256 5 0.899534 81 5 0.9741667 116 5 0.9651515 89 5 0.9920000 89 5 0.8693929 165 5 1.0000000 28 3 0.9515325 216 5 0.915556 37 5 0.9418619 149 5 1.00000 9 0 0.91826 717 5 0.8507581 258 5 0.9888889 75 5 0.937923 259 5 0.9666667 39 5 0.773195 113 5 0.899542 102 5 0.897778 63 5 0.94778 69 5 0.9181044 181 5 0.9692308 49 4 0.93333 63 5 0.932600 173 5 0.9697199 226 5 0.950612 197 5 0.9342357 248 5 0.66875 166 5 0.968923 93 5 0.666667 42 3 0.27500 32 3 0.746086 55 4 0.26162 186 5 0.7739876 254 5 0.906546 225 5 0.946885 220 5 0.9479517 204 5 0.812521 268 5 0.944640 0.9111631 0.743713 0.952445 0.76830 0.910140 0.915865 0.9677273 0.9778237 0.990303 0.875936 1.000000 0.949267 0.919327 0.939889 0.97693 0.89889 0.867226 0.9858586 0.931016 0.9595960 0.784283 0.875067 0.912727 0.93421 0.9318950 0.9617716 0.94061 0.946822 0.9738087 0.952897 0.9363317 0.70064 0.960690 0.6237521 0.27879 0.79964 0.277291 0.802677 0.902390 0.94604 0.9550154 0.821809 3 0.935378 0.931714 3.9062e-04 5 0.9349265 0.928316 0.0066103 0.35807 0.537996 insignificant 1 1 insignificant 0.64544 0.415351 insignificant 1 1 insignificant -0.0035495 0.87367 lowCoverage 1 lowCoverage 0.935378 0.597561 0.334005 5 0.9349265 0.558070 0.376856 2.6342e-17 1.0000e+00 hypermethylated 5.2684e-15 1.0000e+00 hypermethylated 1.0015e-04 9.9989e-01 hypermethylated 1.1128e-02 1.0000000 hypermethylated 0.3230092 0.035648 lowCoverage 1 lowCoverage 0.935378 0.882152 0.0596868 5 0.9349265 0.87049 0.0644394 0.0010338 9.9884e-01 weaklyHypermeth 0.068917 1.000000 weaklyHypermeth 0.034573 0.99914836 weaklyHypermeth 1 1.00000 insignificant 0.0432718 0.313041 lowCoverage 1 lowCoverage 0.931714 0.597561 0.335146 5 0.928316 0.558070 0.370246 3.3296e-11 1.0000e+00 hypermethylated 5.5493e-09 1.0000000 hypermethylated 4.6036e-04 0.99992077 hypermethylated 4.6036e-02 1.000000 hypermethylated 0.326559 0.034362 lowCoverage 1 lowCoverage 0.931714 0.882152 0.05191763 5 0.9283161 0.87049 0.0578291 0.0061438 0.999617 weaklyHypermeth 0.38399 1 insignificant 0.0142608 0.997509 weaklyHypermeth 1.0000 1 insignificant 0.04682132 0.277950 lowCoverage 1 lowCoverage 0.597561 0.882152 -0.285742 5 0.55807 0.87049 -0.312417 0.9999662 3.1111e-04 hypomethylated 1.00000 3.9457e-02 hypomethylated 0.994419 6.4266e-02 insignificant 1 1.000000 insignificant -0.279737 0.057280 lowCoverage 1 lowCoverage chr3 71195032 71196032 35316 FOXP1 ENSG00000114861 0.028042 261 4 0.0013228 530 6 0.0078448 354 6 0.0092031 222 4 0.009804 408 6 0.017780 477 6 0.010432 482 6 0.0054945 370 4 0.0049689 472 5 0.0089286 205 6 0.0099952 369 6 0.0042017 147 6 0.0096154 210 4 0.010870 187 4 0.0074911 362 4 0.00000 221 4 NA 0 0 0.0082667 325 4 0.0045756 443 4 0.010331 451 4 0.0053763 135 4 0.018519 79 4 0.030195 330 4 0.017007 173 5 0.00000 115 4 0.0053343 522 6 0.0017361 405 6 0.00000 136 4 0.012821 423 4 0.0066081 643 6 0.008423 655 6 0.0061077 443 4 0.31021 263 6 0.020934 296 4 0.096446 612 6 0.50000 4 0 0.064961 257 6 0.11408 572 6 0.0089753 531 6 0.021739 284 4 0.017549 234 4 0.0089286 226 4 0.019749 177 4 0.042181 0.0019106 0.011929 0.013546 0.00000 0.026875 0.015773 0.0080891 0.0086957 0.015721 0.014827 0.007353 0.014334 0.015902 0.011235 0.00000 NA 0.012390 0.0069468 0.010522 0.0077658 0.027521 0.029527 0.030313 0.00000 0.0081497 0.0026042 0.00000 0.019587 0.0096358 0.012628 0.0091584 0.32906 0.031276 0.0017445 0.50463 0.11337 0.071854 0.013605 0.032609 0.02608 0.0088459 0.029734 4 0.012009 0.012072 -2.9421e-05 6 0.0083068 0.007156 0.0011508 0.33381 0.780596 insignificant 1 1 insignificant 0.35954 0.972830 insignificant 1 1 insignificant -0.0004403 0.88206 lowCoverage 1 lowCoverage 0.012009 0.088822 -0.073499 6 0.0083068 0.099115 -0.090808 1.0000e+00 1.0996e-08 weaklyHypometh 1.0000e+00 2.1992e-06 weaklyHypometh 1.0000e+00 5.8511e-06 weaklyHypometh 1.0000e+00 0.0014628 weaklyHypometh -0.1755354 0.066538 lowCoverage 1 lowCoverage 0.012013 0.019972 -0.0078627 4 0.0096912 0.01365 -0.0039587 0.8087315 6.2766e-03 lowCoverage 1.000000 1.000000 lowCoverage 0.914056 0.04081055 lowCoverage 1 1.00000 lowCoverage -0.0064847 0.075250 lowCoverage 1 lowCoverage 0.012072 0.088822 -0.073625 6 0.007156 0.099115 -0.091959 1.0000e+00 5.8244e-06 weaklyHypometh 1.0000e+00 0.0011649 weaklyHypometh 1.0000e+00 0.00004139 weaklyHypometh 1.0000e+00 0.010347 weaklyHypometh -0.175095 0.067021 lowCoverage 1 lowCoverage 0.012078 0.019972 -0.00775332 4 0.0083486 0.01365 -0.0053014 0.9995957 0.338936 lowCoverage 1.00000 1 lowCoverage 0.9998686 0.274483 lowCoverage 1.0000 1 lowCoverage -0.00604437 0.133570 lowCoverage 1 lowCoverage 0.088867 0.019972 0.064368 4 0.11563 0.01365 0.101985 0.0066351 9.9970e-01 lowCoverage 0.51039 1.0000e+00 lowCoverage 0.016906 9.9902e-01 lowCoverage 1 1.000000 lowCoverage 0.169051 0.074118 lowCoverage 1 lowCoverage chr3 71399991 71400991 35413 FOXP1 ENSG00000114861 0.847682 284 7 0.8707877 94 7 0.7420918 130 7 0.8266175 200 7 0.811813 81 7 0.848388 286 7 0.719564 163 7 0.8289149 83 7 0.6889604 97 7 0.7630191 112 7 0.8151122 223 7 0.7476190 85 7 0.8667350 99 7 NA 0 0 0.7912905 161 7 0.85269 68 7 0.79408 97 7 0.8070887 304 7 0.8318755 146 7 0.858637 236 7 0.8002165 85 7 0.782161 75 7 0.806229 223 7 0.820480 72 6 0.85395 82 7 0.8333154 154 7 0.8573173 92 7 0.84973 128 7 0.815440 107 7 0.7989167 170 7 0.832255 122 7 0.8251237 349 7 0.78664 106 7 0.843810 110 7 0.731563 325 7 0.76952 125 7 0.841363 100 7 0.75637 174 7 0.8751063 238 7 0.903826 309 7 0.809335 199 7 0.8507260 286 7 0.820586 451 7 0.844985 0.8684464 0.752536 0.840916 0.83556 0.852532 0.722836 0.8164295 0.6855450 0.785472 0.821248 0.731031 0.854979 NA 0.791984 0.84821 0.79379 0.829433 0.8367499 0.847751 0.7920011 0.774612 0.826382 0.822539 0.85203 0.8417999 0.8633725 0.85147 0.812464 0.8113760 0.835058 0.8151609 0.78682 0.844295 0.7313186 0.75740 0.83215 0.752024 0.876609 0.898366 0.81090 0.8380350 0.835431 7 0.812140 0.815552 -1.1586e-02 7 0.8054307 0.817492 -0.0120616 0.69497 0.346942 insignificant 1 1 insignificant 0.93161 0.313109 insignificant 1 1 insignificant -0.0169819 0.22842 insignificant 1 insignificant 0.812140 0.784043 0.022914 7 0.8054307 0.781702 0.023728 8.5555e-02 7.8963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3701e-01 6.7589e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0177344 0.443938 insignificant 1 insignificant 0.812140 0.863115 -0.0414961 7 0.8054307 0.84778 -0.0423460 0.9986058 1.7874e-02 weaklyHypometh 1.000000 1.000000 insignificant 0.990576 0.09457552 insignificant 1 1.00000 insignificant -0.0459701 0.059699 insignificant 1 insignificant 0.815552 0.784043 0.042308 7 0.817492 0.781702 0.035790 1.8314e-03 7.1591e-01 weaklyHypermeth 9.1572e-02 1.0000000 weaklyHypermeth 1.9319e-02 0.87264310 weaklyHypermeth 9.6849e-01 1.000000 insignificant 0.034716 0.128927 insignificant 1 insignificant 0.815552 0.863115 -0.02904436 7 0.8174923 0.84778 -0.0302844 0.9951773 0.029956 weaklyHypometh 1.00000 1 insignificant 0.9601938 0.200854 insignificant 1.0000 1 insignificant -0.02898812 0.177803 insignificant 1 insignificant 0.784043 0.863115 -0.066427 7 0.78170 0.84778 -0.066074 0.9983704 1.8214e-03 weaklyHypometh 1.00000 1.4011e-01 insignificant 0.989609 7.4014e-03 weaklyHypometh 1 0.881350 insignificant -0.063704 0.034089 weaklyHypometh 1 insignificant chr3 72335915 72336915 35581 ENSG00000213456 0.866836 122 5 0.8912676 259 6 0.5833333 24 1 0.9232456 139 5 0.933333 11 0 0.956144 154 5 0.980769 45 4 0.8652047 87 5 0.8666667 24 2 0.8875000 24 1 0.8697337 186 5 0.7000000 21 1 0.7047619 32 1 1.000000 10 0 0.8560000 43 4 0.93750 10 0 1.00000 11 1 0.9266667 81 3 0.9000000 32 3 0.751620 114 4 0.9777778 23 1 1.000000 14 1 0.891598 104 5 0.912121 50 4 0.92333 71 4 0.8698099 199 5 0.9500000 23 1 0.84375 27 3 0.960000 52 5 0.8506400 234 5 0.847379 201 5 0.9509158 107 5 0.78414 151 5 0.666667 84 5 0.812500 198 4 1.00000 20 1 0.710852 137 5 0.57758 171 5 0.8814106 187 5 0.878309 225 5 0.852953 172 5 0.6700000 36 4 0.931355 239 5 0.877681 0.8735420 0.611111 0.925439 0.96296 0.963617 0.958440 0.8749188 0.8518519 0.875000 0.867337 0.722222 0.783069 0.975534 0.840000 0.91251 NA 0.955556 0.9166667 0.835134 0.9753086 1.000000 0.879553 0.902357 0.93069 0.8892950 0.9444444 0.84667 0.977778 0.8776953 0.873631 0.9454619 0.79046 0.654321 0.8824886 1.00000 0.87591 0.538047 0.890456 0.847005 0.87702 0.7444444 0.915881 0 0.907173 0.898643 1.0890e-02 5 0.8970528 0.879350 0.0177025 0.30707 0.798382 insignificant 1 1 insignificant 0.85450 0.188833 insignificant 1 1 insignificant -0.0447479 0.13085 lowCoverage 1 lowCoverage 0.907173 0.774704 0.134831 5 0.8970528 0.767330 0.129723 8.9157e-05 9.9992e-01 weaklyHypermeth 5.9438e-03 1.0000e+00 weaklyHypermeth 1.3895e-01 9.2059e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.1114061 0.126832 lowCoverage 1 lowCoverage 0.907238 0.866123 0.0349503 5 0.9142106 0.89253 0.0216832 0.0546173 9.4977e-01 insignificant 1.000000 1.000000 insignificant 0.015257 0.88327203 weaklyHypermeth 1 1.00000 insignificant 0.0272236 0.611976 lowCoverage 1 lowCoverage 0.898643 0.774704 0.125104 5 0.879350 0.767330 0.112020 2.1279e-03 9.9816e-01 weaklyHypermeth 1.0133e-01 1.0000000 insignificant 5.8220e-02 0.99776285 insignificant 1.0000e+00 1.000000 insignificant 0.156154 0.045571 lowCoverage 1 lowCoverage 0.898643 0.865654 0.02874482 5 0.8793503 0.87103 0.0083174 0.0230617 0.652874 weaklyHypermeth 1.00000 1 insignificant 0.0013554 0.988855 weaklyHypermeth 0.1506 1 insignificant 0.07197148 0.191488 lowCoverage 1 lowCoverage 0.774704 0.865654 -0.093347 5 0.76733 0.87103 -0.103703 0.9827412 8.1227e-02 insignificant 1.00000 1.0000e+00 insignificant 0.687885 6.9022e-01 insignificant 1 1.000000 insignificant -0.084183 0.287947 lowCoverage 1 lowCoverage chr3 72341999 72342999 35582 ENSG00000213456 0.818026 241 4 0.7246300 258 5 0.6663978 126 5 0.8344075 193 5 0.720370 43 2 0.878695 322 5 0.754167 63 4 0.8279293 112 5 0.7192428 95 4 0.9279053 83 4 0.8766368 177 5 0.8819686 76 3 0.8504585 106 4 0.813774 68 3 0.8334705 121 5 0.41667 44 2 0.38333 13 1 0.7788635 223 4 0.8944516 137 5 0.915656 203 5 0.9121154 65 4 0.808660 90 4 0.908213 124 5 0.900633 61 5 0.91667 63 4 0.8465455 231 5 0.6575855 105 5 0.61530 104 4 0.825658 143 5 0.8813422 244 5 0.878700 228 5 0.8739127 232 5 0.62068 184 5 0.738462 87 4 0.887500 317 4 0.57778 18 3 0.724389 148 5 0.65922 186 5 0.8671275 138 3 0.860557 237 5 0.892723 173 4 0.8486307 126 4 0.869423 190 5 0.812826 0.8056799 0.708404 0.848903 0.78921 0.847819 0.785368 0.8348676 0.6797820 0.868064 0.863221 0.913744 0.824033 0.831710 0.842848 0.53085 0.33885 0.836224 0.8649303 0.879039 0.9117006 0.724248 0.894315 0.808405 0.89023 0.8413733 0.6618621 0.56182 0.829409 0.9013978 0.878351 0.8590798 0.62119 0.767932 0.9184280 0.80893 0.80724 0.306315 0.851731 0.856332 0.84522 0.8257953 0.892614 2 0.831731 0.840237 -7.6795e-03 5 0.8290527 0.845176 -0.0161230 0.76433 0.243375 insignificant 1 1 insignificant 0.96436 0.059740 insignificant 1 1 insignificant -0.0595921 0.18245 lowCoverage 1 lowCoverage 0.831731 0.738298 0.110717 5 0.8290527 0.718188 0.110865 1.3725e-03 7.0981e-01 weaklyHypermeth 6.3210e-02 1.0000e+00 weaklyHypermeth 2.5148e-01 6.2660e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0745141 0.206834 lowCoverage 1 lowCoverage 0.831731 0.846065 -0.0144290 5 0.8290527 0.85164 -0.0225863 0.7360068 2.8138e-01 insignificant 1.000000 1.000000 insignificant 0.902923 0.08068778 insignificant 1 1.00000 insignificant -0.0918398 0.012774 lowCoverage 1 lowCoverage 0.840237 0.738298 0.111749 5 0.845176 0.718188 0.126988 2.4990e-03 8.8501e-01 weaklyHypermeth 1.0865e-01 1.0000000 insignificant 2.9960e-02 0.93966358 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.134106 0.032004 lowCoverage 1 lowCoverage 0.840237 0.846065 -0.00501393 5 0.8451757 0.85164 -0.0064633 0.4558629 0.486936 insignificant 1.00000 1 insignificant 0.7022406 0.367482 insignificant 1.0000 1 insignificant -0.03224767 0.296329 lowCoverage 1 lowCoverage 0.738298 0.846065 -0.121684 5 0.71819 0.85164 -0.133451 0.5029898 1.1754e-02 weaklyHypometh 1.00000 6.7741e-01 insignificant 0.711351 7.0705e-02 insignificant 1 1.000000 insignificant -0.166354 0.013222 lowCoverage 1 lowCoverage chr3 73540044 73541044 35676 ENSG00000206691 0.968254 69 7 0.9166667 45 3 0.8307823 47 7 0.9841270 43 3 0.955782 46 7 0.867038 145 7 0.960317 54 7 0.9183673 36 4 0.9387755 61 7 1.0000000 28 4 0.9781955 109 7 0.9642857 25 0 0.9523810 39 3 0.780952 27 3 0.9637188 56 7 1.00000 14 0 0.83333 4 0 0.9722222 20 3 0.9523810 35 5 0.909829 121 7 1.0000000 4 0 0.928571 14 0 1.000000 6 0 1.000000 10 0 0.50000 2 0 0.9434524 91 7 0.9428571 22 3 0.91667 8 0 0.952381 18 0 0.9857143 97 7 0.979592 51 7 0.9550597 156 7 0.67078 66 7 0.285714 7 0 0.428571 15 0 NA 0 0 0.349009 145 7 0.97959 52 7 0.9166667 43 3 1.000000 25 3 0.971429 24 3 0.9428571 19 3 0.973669 72 7 0.975309 0.8919753 0.830026 0.979424 0.96384 0.874950 0.965021 0.9365079 0.9206349 1.000000 0.986550 0.953704 0.938272 0.814815 0.969430 1.00000 0.87323 0.966768 0.9382716 0.901631 0.9571399 0.907407 0.979481 0.957140 0.79112 0.9359568 0.9555556 0.90715 0.938272 0.9814815 0.973545 0.9552121 0.68771 0.222222 0.3580247 NA 0.28946 0.973545 0.966049 1.000000 0.96296 0.9259259 0.965868 0 0.932617 0.960334 -2.8806e-02 7 0.9316637 0.960571 -0.0289073 0.99405 0.031089 weaklyHypometh 1 1 insignificant 0.98208 0.065641 insignificant 1 1 insignificant 0.0070126 0.86923 lowCoverage 1 lowCoverage 0.932617 0.550877 0.386218 7 0.9316637 0.543447 0.388217 2.4045e-24 1.0000e+00 hypermethylated 6.0112e-22 1.0000e+00 hypermethylated 2.3556e-08 1.0000e+00 hypermethylated 5.8889e-06 1.0000000 hypermethylated 0.3896373 0.037119 lowCoverage 1 lowCoverage 0.932617 0.956284 -0.0201764 3 0.9316637 0.96597 -0.0343067 0.9589395 3.1438e-02 lowCoverage 1.000000 1.000000 lowCoverage 0.891078 0.04038208 lowCoverage 1 1.00000 lowCoverage -0.0285539 0.171471 lowCoverage 1 lowCoverage 0.960334 0.550877 0.413128 7 0.960571 0.543447 0.417124 1.5769e-15 1.0000e+00 hypermethylated 3.1538e-13 1.0000000 hypermethylated 3.5103e-07 0.99999999 hypermethylated 8.7757e-05 1.000000 hypermethylated 0.382625 0.036691 lowCoverage 1 lowCoverage 0.960334 0.956284 -0.00076067 3 0.9605710 0.96597 -0.0053994 0.8489085 0.096566 lowCoverage 1.00000 1 lowCoverage 0.7754371 0.224698 lowCoverage 1.0000 1 lowCoverage -0.03556650 0.412588 lowCoverage 1 lowCoverage 0.550877 0.956284 -0.482955 3 0.54345 0.96597 -0.422524 1.0000000 1.0339e-08 lowCoverage 1.00000 2.5848e-06 lowCoverage 1.000000 1.2084e-05 lowCoverage 1 0.003021 lowCoverage -0.418191 0.029805 lowCoverage 1 lowCoverage chr3 73540340 73541340 35677 ENSG00000206691 0.968254 69 7 0.9166667 45 3 0.8307823 47 7 0.9841270 43 3 0.955782 46 7 0.867038 145 7 0.960317 54 7 0.9183673 36 4 0.9387755 61 7 1.0000000 28 4 0.9781955 109 7 0.9642857 25 0 0.9523810 39 3 0.780952 27 3 0.9637188 56 7 1.00000 14 0 0.83333 4 0 0.9722222 20 3 0.9523810 35 5 0.909829 121 7 1.0000000 4 0 0.928571 14 0 1.000000 6 0 1.000000 10 0 0.50000 2 0 0.9434524 91 7 0.9428571 22 3 0.91667 8 0 0.952381 18 0 0.9857143 97 7 0.979592 51 7 0.9550597 156 7 0.67078 66 7 0.285714 7 0 0.428571 15 0 NA 0 0 0.349009 145 7 0.97959 52 7 0.9166667 43 3 1.000000 25 3 0.971429 24 3 0.9428571 19 3 0.973669 72 7 0.975309 0.8919753 0.830026 0.979424 0.96384 0.874950 0.965021 0.9365079 0.9206349 1.000000 0.986550 0.953704 0.938272 0.814815 0.969430 1.00000 0.87323 0.966768 0.9382716 0.901631 0.9571399 0.907407 0.979481 0.957140 0.79112 0.9359568 0.9555556 0.90715 0.938272 0.9814815 0.973545 0.9552121 0.68771 0.222222 0.3580247 NA 0.28946 0.973545 0.966049 1.000000 0.96296 0.9259259 0.965868 0 0.932617 0.960334 -2.8806e-02 7 0.9316637 0.960571 -0.0289073 0.99405 0.031089 weaklyHypometh 1 1 insignificant 0.98208 0.065641 insignificant 1 1 insignificant 0.0070126 0.86923 lowCoverage 1 lowCoverage 0.932617 0.550877 0.386218 7 0.9316637 0.543447 0.388217 2.4045e-24 1.0000e+00 hypermethylated 6.0112e-22 1.0000e+00 hypermethylated 2.3556e-08 1.0000e+00 hypermethylated 5.8889e-06 1.0000000 hypermethylated 0.3896373 0.037119 lowCoverage 1 lowCoverage 0.932617 0.956284 -0.0201764 3 0.9316637 0.96597 -0.0343067 0.9589395 3.1438e-02 lowCoverage 1.000000 1.000000 lowCoverage 0.891078 0.04038208 lowCoverage 1 1.00000 lowCoverage -0.0285539 0.171471 lowCoverage 1 lowCoverage 0.960334 0.550877 0.413128 7 0.960571 0.543447 0.417124 1.5769e-15 1.0000e+00 hypermethylated 3.1538e-13 1.0000000 hypermethylated 3.5103e-07 0.99999999 hypermethylated 8.7757e-05 1.000000 hypermethylated 0.382625 0.036691 lowCoverage 1 lowCoverage 0.960334 0.956284 -0.00076067 3 0.9605710 0.96597 -0.0053994 0.8489085 0.096566 lowCoverage 1.00000 1 lowCoverage 0.7754371 0.224698 lowCoverage 1.0000 1 lowCoverage -0.03556650 0.412588 lowCoverage 1 lowCoverage 0.550877 0.956284 -0.482955 3 0.54345 0.96597 -0.422524 1.0000000 1.0339e-08 lowCoverage 1.00000 2.5848e-06 lowCoverage 1.000000 1.2084e-05 lowCoverage 1 0.003021 lowCoverage -0.418191 0.029805 lowCoverage 1 lowCoverage chr3 73540458 73541458 35678 ENSG00000206691 0.968254 69 7 0.9166667 45 3 0.8307823 47 7 0.9841270 43 3 0.955782 46 7 0.867038 145 7 0.960317 54 7 0.9183673 36 4 0.9387755 61 7 1.0000000 28 4 0.9781955 109 7 0.9642857 25 0 0.9523810 39 3 0.780952 27 3 0.9637188 56 7 1.00000 14 0 0.83333 4 0 0.9722222 20 3 0.9523810 35 5 0.909829 121 7 1.0000000 4 0 0.928571 14 0 1.000000 6 0 1.000000 10 0 0.50000 2 0 0.9434524 91 7 0.9428571 22 3 0.91667 8 0 0.952381 18 0 0.9857143 97 7 0.979592 51 7 0.9550597 156 7 0.67078 66 7 0.285714 7 0 0.428571 15 0 NA 0 0 0.349009 145 7 0.97959 52 7 0.9166667 43 3 1.000000 25 3 0.971429 24 3 0.9428571 19 3 0.973669 72 7 0.975309 0.8919753 0.830026 0.979424 0.96384 0.874950 0.965021 0.9365079 0.9206349 1.000000 0.986550 0.953704 0.938272 0.814815 0.969430 1.00000 0.87323 0.966768 0.9382716 0.901631 0.9571399 0.907407 0.979481 0.957140 0.79112 0.9359568 0.9555556 0.90715 0.938272 0.9814815 0.973545 0.9552121 0.68771 0.222222 0.3580247 NA 0.28946 0.973545 0.966049 1.000000 0.96296 0.9259259 0.965868 0 0.932617 0.960334 -2.8806e-02 7 0.9316637 0.960571 -0.0289073 0.99405 0.031089 weaklyHypometh 1 1 insignificant 0.98208 0.065641 insignificant 1 1 insignificant 0.0070126 0.86923 lowCoverage 1 lowCoverage 0.932617 0.550877 0.386218 7 0.9316637 0.543447 0.388217 2.4045e-24 1.0000e+00 hypermethylated 6.0112e-22 1.0000e+00 hypermethylated 2.3556e-08 1.0000e+00 hypermethylated 5.8889e-06 1.0000000 hypermethylated 0.3896373 0.037119 lowCoverage 1 lowCoverage 0.932617 0.956284 -0.0201764 3 0.9316637 0.96597 -0.0343067 0.9589395 3.1438e-02 lowCoverage 1.000000 1.000000 lowCoverage 0.891078 0.04038208 lowCoverage 1 1.00000 lowCoverage -0.0285539 0.171471 lowCoverage 1 lowCoverage 0.960334 0.550877 0.413128 7 0.960571 0.543447 0.417124 1.5769e-15 1.0000e+00 hypermethylated 3.1538e-13 1.0000000 hypermethylated 3.5103e-07 0.99999999 hypermethylated 8.7757e-05 1.000000 hypermethylated 0.382625 0.036691 lowCoverage 1 lowCoverage 0.960334 0.956284 -0.00076067 3 0.9605710 0.96597 -0.0053994 0.8489085 0.096566 lowCoverage 1.00000 1 lowCoverage 0.7754371 0.224698 lowCoverage 1.0000 1 lowCoverage -0.03556650 0.412588 lowCoverage 1 lowCoverage 0.550877 0.956284 -0.482955 3 0.54345 0.96597 -0.422524 1.0000000 1.0339e-08 lowCoverage 1.00000 2.5848e-06 lowCoverage 1.000000 1.2084e-05 lowCoverage 1 0.003021 lowCoverage -0.418191 0.029805 lowCoverage 1 lowCoverage chr3 75622448 75623448 35889 ENSG00000163612 0.781064 304 7 0.8154449 100 6 0.8026786 74 6 0.9476902 116 7 0.844444 43 5 0.899232 186 6 0.884375 52 6 0.9026407 103 6 0.8429071 68 5 0.9238227 80 5 0.8766140 175 8 0.7047619 34 5 0.8677083 100 6 1.000000 3 0 0.9399038 99 5 0.83333 40 3 0.88194 52 5 0.8537674 269 5 0.8677083 71 6 0.909745 205 6 0.6819444 53 5 0.855311 62 5 0.753173 142 5 0.826687 56 5 0.91667 79 5 0.9155280 133 8 0.9368687 71 5 0.93778 30 3 0.932997 53 5 0.9558492 195 8 0.906373 156 8 0.9306105 264 6 0.82454 114 8 0.764746 95 6 0.880952 29 2 0.89167 80 5 0.957051 78 6 0.90600 113 8 0.9115833 190 7 0.850381 283 7 0.960623 128 8 0.9549540 202 5 0.943813 272 7 0.829656 0.7903195 0.905565 0.981216 0.84833 0.843028 0.846563 0.8665250 0.8147524 0.936386 0.835499 0.708869 0.844427 NA 0.952764 0.81250 0.88177 0.912166 0.8396875 0.889058 0.8219531 0.839904 0.869234 0.825439 0.91875 0.9053936 0.9089331 0.94010 0.922513 0.9450362 0.883096 0.9073861 0.78631 0.721879 0.7790907 0.88901 0.97099 0.889047 0.880591 0.813976 0.95801 0.9444753 0.923737 5 0.867004 0.900929 -2.9001e-02 6 0.8966008 0.929548 -0.0329468 0.99595 0.230296 insignificant 1 1 insignificant 0.98376 0.304849 insignificant 1 1 insignificant -0.0101595 0.72600 insignificant 1 insignificant 0.866943 0.842829 0.031533 6 0.8836759 0.865569 0.018107 1.6500e-03 7.9847e-01 weaklyHypermeth 6.8752e-02 1.0000e+00 weaklyHypermeth 1.0793e-01 7.9062e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0018366 0.954296 insignificant 1 insignificant 0.866943 0.867907 -0.0225501 6 0.8836759 0.91892 -0.0352473 0.9962776 4.5519e-02 weaklyHypometh 1.000000 1.000000 insignificant 0.994224 0.06784356 insignificant 1 1.00000 insignificant -0.0552815 0.055412 insignificant 1 insignificant 0.900852 0.842829 0.060706 6 0.920741 0.865569 0.055172 2.4554e-03 9.9929e-01 weaklyHypermeth 1.0865e-01 1.0000000 insignificant 9.1176e-02 0.99940430 insignificant 1.0000e+00 1.000000 insignificant 0.008323 0.824926 insignificant 1 insignificant 0.900852 0.867907 0.00512758 6 0.9207410 0.91892 0.0018179 0.9856001 0.368262 insignificant 1.00000 1 insignificant 0.9957319 0.497662 insignificant 1.0000 1 insignificant -0.04512196 0.179607 insignificant 1 insignificant 0.842829 0.867907 -0.061025 6 0.86557 0.91892 -0.053354 0.9994134 1.6625e-03 weaklyHypometh 1.00000 1.3854e-01 insignificant 0.999859 1.7117e-02 weaklyHypometh 1 1.000000 insignificant -0.053445 0.153211 insignificant 1 insignificant chr3 76751008 76752008 35956 ENSG00000212104 0.883930 245 6 0.9319885 100 6 0.7457265 105 6 0.7660037 127 6 0.899123 60 5 0.911647 247 6 0.934780 95 6 0.8352233 69 6 0.8314186 92 6 0.9224034 97 6 0.8469697 163 6 0.7530303 74 6 0.9432493 80 6 0.916667 12 1 0.8672515 123 6 0.95556 35 4 0.95707 43 4 0.9238958 140 6 0.9134503 95 6 0.869136 215 6 0.8087302 35 3 0.917098 77 6 0.855781 146 6 0.934028 46 4 0.98148 59 6 0.8644370 122 6 0.9226190 65 6 1.00000 33 3 0.970018 53 4 0.8208357 130 6 0.887731 115 6 0.8689957 297 6 0.85345 100 6 0.825534 90 6 0.922764 121 6 0.86204 63 6 0.846825 37 3 0.76530 124 6 0.9161648 266 6 0.894744 241 6 0.907672 165 6 0.8776202 242 6 0.920065 239 6 0.887978 0.9170405 0.752983 0.769171 0.87195 0.920582 0.925286 0.8801893 0.8401978 0.926384 0.860474 0.789419 0.925460 NA 0.868917 0.95145 0.95331 0.917541 0.9255993 0.868156 0.8039337 0.917646 0.857567 0.917572 0.98792 0.8818207 0.9068323 1.00000 0.960778 0.8327792 0.886759 0.8859472 0.84947 0.822784 0.8982990 0.85791 0.86159 0.796360 0.914780 0.907693 0.91623 0.8870847 0.926489 3 0.882273 0.887097 -5.2221e-03 6 0.8758202 0.879535 -0.0037152 0.79737 0.540357 insignificant 1 1 insignificant 0.95800 0.121953 insignificant 1 1 insignificant -0.0222202 0.34664 insignificant 1 insignificant 0.882273 0.848598 0.031346 6 0.8758202 0.851942 0.023878 3.3695e-02 9.6239e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.2225e-02 9.7904e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.0344398 0.206266 insignificant 1 insignificant 0.882273 0.910668 -0.0281318 6 0.8758202 0.90231 -0.0264936 0.9880066 9.2780e-02 insignificant 1.000000 1.000000 insignificant 0.898453 0.25177157 insignificant 1 1.00000 insignificant -0.0228273 0.182226 insignificant 1 insignificant 0.887097 0.848598 0.036931 6 0.879535 0.851942 0.027593 1.1164e-02 9.2774e-01 weaklyHypermeth 3.8496e-01 1.0000000 insignificant 6.5461e-03 0.99767580 weaklyHypermeth 3.6367e-01 1.000000 insignificant 0.056660 0.061973 insignificant 1 insignificant 0.887097 0.910668 -0.02292483 6 0.8795353 0.90231 -0.0227785 0.9877295 0.135032 insignificant 1.00000 1 insignificant 0.7074385 0.647696 insignificant 1.0000 1 insignificant -0.00060709 0.975614 insignificant 1 insignificant 0.848598 0.910668 -0.059969 6 0.85194 0.90231 -0.050372 0.9967310 3.1566e-04 weaklyHypometh 1.00000 3.9457e-02 weaklyHypometh 0.995310 5.5814e-03 weaklyHypometh 1 0.797345 insignificant -0.057267 0.040649 weaklyHypometh 1 insignificant chr3 77559369 77560369 36092 ENSG00000213450 0.82743 352 11 0.70061 292 11 0.74416 172 11 0.8297 155 7 0.76311 116 9 0.77387 295 11 0.81164 137 11 0.75358 198 11 0.77349 103 7 0.77839 201 11 0.81044 405 11 0.63351 95 9 0.75030 275 11 1 10 1 0.81643 207 11 0.80563 89 9 0.63787 114 9 0.85657 164 9 0.80499 333 11 0.77738 355 11 0.93085 54 5 0.81732 87 9 0.78222 252 11 0.8697 94 8 0.67262 44 4 0.79325 386 11 0.89221 122 8 0.58373 37 3 0.8065 268 8 0.87227 369 11 0.78284 433 11 0.73883 474 11 0.71693 282 11 0.72618 239 11 0.72577 166 11 0.80366 75 7 0.64286 98 8 0.70718 397 11 0.84085 283 10 0.84201 383 11 0.80656 205 9 0.80048 212 11 0.84978 262 9 0.85011 0.72355 0.77736 0.85214 0.80321 0.80921 0.82412 0.80471 0.85092 0.81382 0.83509 0.69705 0.79434 NA 0.83839 0.79759 0.67952 0.8831 0.82008 0.8228 0.89837 0.81681 0.79528 0.87952 0.7249 0.80947 0.91627 0.7591 0.83562 0.88644 0.81948 0.76665 0.70452 0.73031 0.75373 0.86384 0.68018 0.77786 0.87113 0.86517 0.85992 0.86603 0.8675 4 0.80408 0.83931 -0.0103557 11 0.78404 0.79627 -0.0122234 0.92328 0.16081 insignificant 1 1 insignificant 0.98237 0.034900 weaklyHypometh 1 1 insignificant -0.012739 0.70291 insignificant 1 insignificant 0.80408 0.76850 0.061050 11 0.78404 0.72432 0.059721 1.1351e-05 0.99962 weaklyHypermeth 0.0022702 1 weaklyHypermeth 0.0020779 0.99887 weaklyHypermeth 0.51946 1 insignificant 0.062026 0.040794 weaklyHypermeth 1 insignificant 0.80408 0.80967 -0.055186 11 0.78404 0.83496 -0.050914 0.99996 0.00031065 weaklyHypometh 1 0.31065 insignificant 0.99997 0.00006703 weaklyHypometh 1 0.06703 weaklyHypometh -0.045481 0.033898 weaklyHypometh 1 insignificant 0.83931 0.76850 0.069585 11 0.79627 0.72432 0.071944 1.7885e-05 1.00000 weaklyHypermeth 0.003577 1 weaklyHypermeth 1.7570e-05 0.99994 weaklyHypermeth 0.0087852 1 weaklyHypermeth 0.074765 0.048344 weaklyHypermeth 1 insignificant 0.83931 0.80967 -0.042410 11 0.79627 0.83496 -0.038691 0.99897 0.020098 weaklyHypometh 1 1 insignificant 0.99105 0.17370 insignificant 1 1 insignificant -0.032743 0.29017 insignificant 1 insignificant 0.76850 0.80967 -0.11641 11 0.72432 0.83496 -0.11063 1.00000 4.2010e-07 weaklyHypometh 1 0.0004201 weaklyHypometh 1.00000 2.8922e-06 weaklyHypometh 1 0.0028922 weaklyHypometh -0.10751 0.002331 weaklyHypometh 1 insignificant chr3 83495306 83496306 36782 GBE1 ENSG00000114480 0.84914 98 5 0.95652 32 2 0.59259 32 1 0.9000 39 4 0.46000 19 1 0.81887 184 5 0.61667 22 1 0.89167 41 2 0.90000 13 2 0.68947 31 2 0.88500 69 5 0.80000 8 0 0.97368 28 2 NA 0 0 0.72647 28 2 1.00000 4 0 0.66667 6 1 0.81111 41 5 0.84573 33 2 0.84102 214 5 0.80000 15 1 0.82500 34 4 0.88333 23 2 0.8000 12 0 1.00000 7 0 0.92083 54 4 0.85333 40 5 1.00000 9 1 0.7675 29 2 0.70140 60 2 0.78135 69 5 0.79626 225 5 0.59500 46 4 0.91667 13 1 0.87000 29 2 0.71000 12 1 0.58333 13 1 0.66378 67 5 0.89731 74 5 0.80676 89 5 0.88571 46 5 0.89258 61 3 0.83333 87 5 0.97898 0.93237 0.97119 1.00000 0.84444 0.94444 0.94444 0.96759 0.95556 0.95906 0.89167 1.00000 0.95906 NA 0.85294 1.00000 0.72949 1.0000 0.91548 0.9447 1.00000 1.00000 0.93519 1.00000 1.0000 0.95139 1.00000 1.0000 0.92917 0.94990 0.97531 0.95113 0.90278 0.81481 1.00000 0.78889 0.75926 0.89249 0.97009 0.91349 1.00000 0.96148 1.0000 0 0.86412 0.87175 -0.0077495 5 0.81761 0.81536 0.0022548 0.62495 0.28386 insignificant 1 1 insignificant 0.96877 0.045938 weaklyHypometh 1 1 insignificant -0.042789 0.31744 lowCoverage 1 lowCoverage 0.86412 0.79444 0.088119 2 0.81761 0.69216 0.125447 3.5046e-04 0.99987 lowCoverage 0.0500661 1 lowCoverage 0.0366029 0.74675 lowCoverage 1.00000 1 lowCoverage 0.078165 0.268252 lowCoverage 1 lowCoverage 0.86412 0.90756 -0.031369 5 0.81761 0.85410 -0.036491 0.97417 0.13936801 insignificant 1 1.00000 insignificant 0.97984 0.11637898 insignificant 1 1.00000 insignificant -0.061843 0.112428 lowCoverage 1 lowCoverage 0.87175 0.79444 0.098932 2 0.81536 0.69216 0.123192 1.3783e-04 0.99985 lowCoverage 0.022972 1 lowCoverage 6.6127e-03 0.98961 lowCoverage 1.0000000 1 lowCoverage 0.120954 0.095902 lowCoverage 1 lowCoverage 0.87175 0.90756 -0.022878 5 0.81536 0.85410 -0.038745 0.92337 0.086103 insignificant 1 1 insignificant 0.73475 0.76638 insignificant 1 1 insignificant -0.019054 0.56240 lowCoverage 1 lowCoverage 0.79444 0.90756 -0.11748 2 0.69216 0.85410 -0.16194 0.99994 2.3252e-03 lowCoverage 1 0.4650466 lowCoverage 0.99494 3.9299e-02 lowCoverage 1 1.0000000 lowCoverage -0.14001 0.059023 lowCoverage 1 lowCoverage chr3 87159496 87160496 37124 VGLL3 ENSG00000206538 0.85328 296 10 0.68672 208 9 0.64594 171 10 0.70967 215 10 0.74217 119 10 0.70127 573 10 0.81392 169 9 0.78347 191 10 0.86742 129 10 0.84087 116 8 0.73790 325 10 0.61667 49 4 0.79936 152 10 0.81500 27 1 0.83169 156 8 0.75277 76 8 0.72679 145 10 0.63309 185 10 0.80481 188 10 0.75049 428 10 0.72921 68 6 0.87286 85 7 0.73603 214 10 0.65875 71 7 0.72970 85 8 0.76900 212 10 0.58877 107 7 0.61458 56 4 0.57672 130 9 0.80461 221 9 0.73834 192 10 0.82390 491 10 0.71002 152 7 0.61704 118 10 0.69359 261 10 0.77381 95 7 0.61606 172 10 0.69041 209 10 0.81539 270 10 0.88366 367 10 0.86790 272 10 0.81520 288 10 0.82174 284 10 0.85774 0.75538 0.71213 0.82864 0.88302 0.82138 0.82166 0.80021 0.85861 0.88002 0.78760 0.64143 0.85572 0.84488 0.80780 0.82093 0.78283 0.85403 0.88712 0.83333 0.80969 0.86797 0.82515 0.74230 0.85502 0.84694 0.74399 0.77357 0.78871 0.84051 0.80773 0.81178 0.78212 0.54236 0.78948 0.80025 0.72471 0.83618 0.83609 0.87910 0.88328 0.86870 0.84285 4 0.80986 0.80207 0.0086975 10 0.74652 0.70437 0.0421482 0.24857 0.97056 insignificant 1 1 insignificant 0.30773 0.99346 insignificant 1 1 insignificant 0.0354590 0.27853 insignificant 1 insignificant 0.81008 0.73883 0.069599 10 0.73983 0.64976 0.0900737 1.4744e-03 0.91520 weaklyHypermeth 0.0982925 1 weaklyHypermeth 0.01439440 0.98257 weaklyHypermeth 1.00000 1 insignificant 0.0721761 0.0346073 weaklyHypermeth 1.00000 insignificant 0.81200 0.84470 -0.039724 10 0.69375 0.87837 -0.184623 0.99990 0.035215 weaklyHypometh 1 1 insignificant 0.99994 0.0346148 weaklyHypometh 1 1 insignificant -0.085112 0.00145483 weaklyHypometh 0.72742 insignificant 0.80228 0.73883 0.059357 10 0.72991 0.64976 0.080157 1.4157e-02 0.85827 weaklyHypermeth 0.67413105 1 insignificant 0.0744176 0.92909 insignificant 1.00000 1 insignificant 0.036717 0.331138 insignificant 1 insignificant 0.80676 0.84449 -0.041496 10 0.70377 0.85810 -0.154325 0.99972 0.011838 weaklyHypometh 1 1 insignificant 0.99986 0.012362 weaklyHypometh 1 1 insignificant -0.120571 0.0013952 weaklyHypometh 1 insignificant 0.74184 0.84438 -0.105755 10 0.73146 0.84520 -0.11373 0.99745 2.0948e-04 weaklyHypometh 1 4.1897e-02 weaklyHypometh 0.99997 0.00011352 weaklyHypometh 1 0.10328 insignificant -0.157289 0.00057750 weaklyHypometh 0.19250 insignificant chr3 101422372 101423372 37729 FILIP1L ENSG00000168386 0.79867 486 13 0.80334 372 13 0.79456 208 12 0.83102 235 11 0.82848 99 10 0.78282 479 13 0.76313 191 13 0.74785 226 12 0.67949 147 12 0.76169 193 12 0.79093 467 13 0.71156 114 9 0.82978 247 12 0.92308 26 2 0.84922 235 13 0.80397 105 9 0.78977 72 8 0.75744 247 12 0.74146 262 13 0.84698 357 13 0.80824 100 9 0.69343 74 6 0.70244 263 13 0.87762 91 9 0.88874 75 7 0.77055 452 13 0.76464 159 9 0.79487 55 5 0.78180 256 12 0.76835 403 13 0.78780 373 13 0.79655 538 13 0.72545 329 13 0.74916 247 13 0.76134 324 13 0.71211 103 8 0.76305 116 8 0.75509 378 13 0.82057 328 11 0.81291 478 13 0.78742 287 12 0.83813 306 11 0.81610 328 11 0.80815 0.81771 0.81280 0.84019 0.84326 0.78175 0.82876 0.78308 0.72574 0.76090 0.81553 0.76156 0.83616 NA 0.85529 0.85034 0.78009 0.76785 0.75097 0.83830 0.80237 0.76157 0.73827 0.86189 0.89663 0.77382 0.81596 0.84081 0.82946 0.77452 0.82061 0.80794 0.71753 0.76935 0.75309 0.74227 0.75284 0.75860 0.80797 0.81926 0.79866 0.84240 0.82399 5 0.80705 0.82494 0.0059980 13 0.79010 0.78109 0.0090189 0.26170 0.76919 insignificant 1 1 insignificant 0.59958 0.27283 insignificant 1 1 insignificant 0.0055089 0.79019 insignificant 1 insignificant 0.80705 0.78624 0.040161 13 0.79010 0.76253 0.0275738 7.5145e-04 0.93719 weaklyHypermeth 0.0536748 1 weaklyHypermeth 0.00067909 0.98035 weaklyHypermeth 0.13582 1 insignificant 0.0473953 0.0039518 weaklyHypermeth 0.98795 insignificant 0.80705 0.79965 -0.019118 13 0.79010 0.81898 -0.028876 0.98419 0.021837 weaklyHypometh 1 1 insignificant 0.91487 0.0200164 weaklyHypometh 1 1 insignificant -0.023265 0.12453621 insignificant 1.00000 insignificant 0.82494 0.78624 0.035061 13 0.78109 0.76253 0.018555 1.3235e-02 0.87344 weaklyHypermeth 0.66174610 1 insignificant 0.0088137 0.99900 weaklyHypermeth 0.80125 1 insignificant 0.041886 0.039686 weaklyHypermeth 1 insignificant 0.82494 0.79965 -0.018744 13 0.78109 0.81898 -0.037895 0.97366 0.019592 weaklyHypometh 1 1 insignificant 0.81647 0.193294 insignificant 1 1 insignificant -0.028774 0.1405346 insignificant 1 insignificant 0.78624 0.79965 -0.056034 13 0.76253 0.81898 -0.05645 0.99987 1.7652e-04 weaklyHypometh 1 4.1897e-02 weaklyHypometh 0.99992 0.00028578 weaklyHypometh 1 0.10328 insignificant -0.070661 0.00020856 weaklyHypometh 0.17667 insignificant chr3 103690907 103691907 37780 ZPLD1 ENSG00000170044 0.90694 312 10 0.90071 114 9 0.69500 125 7 0.93765 250 8 0.85685 161 7 0.89143 189 10 0.69116 128 7 0.72913 111 9 0.83271 94 6 0.85894 125 6 0.86878 206 10 0.56627 180 6 0.85694 160 10 0.76391 72 6 0.81309 127 8 0.75583 164 7 0.81552 194 10 0.86176 289 9 0.92000 58 6 0.86209 142 9 0.84932 47 5 0.85862 72 6 0.91571 274 10 0.80997 69 6 0.88363 103 8 0.90372 132 8 0.91621 100 7 0.85812 50 6 0.82830 132 8 0.91700 141 9 0.80311 104 7 0.81264 264 10 0.77087 122 10 0.79392 87 7 0.88874 137 9 0.83315 66 7 0.80700 108 7 0.84272 187 9 0.88361 272 8 0.93140 331 8 0.93354 281 9 0.93496 280 8 0.89373 324 8 0.91419 0.86054 0.77966 0.93750 0.85773 0.90604 0.76665 0.78481 0.77602 0.89936 0.88324 0.74285 0.87156 0.79179 0.79753 0.82358 0.85250 0.87240 0.92408 0.86291 0.87470 0.86735 0.89856 0.79833 0.87634 0.93292 0.89542 0.82911 0.86716 0.92169 0.86958 0.86459 0.76205 0.84477 0.85279 0.85545 0.79608 0.86992 0.91405 0.92318 0.94534 0.94035 0.91186 2 0.87430 0.89315 -0.0147547 10 0.86744 0.88004 -0.0126039 0.52304 0.22820 insignificant 1 1 insignificant 0.96164 0.13000 insignificant 1 1 insignificant -0.0437943 0.08296 insignificant 1 insignificant 0.87406 0.82037 0.060775 9 0.83403 0.82622 0.0078108 2.5769e-05 0.94068 weaklyHypermeth 0.0036814 1 weaklyHypermeth 0.06262522 0.79748 insignificant 1.00000 1 insignificant -0.0034998 0.8977774 insignificant 1.00000 insignificant 0.87430 0.92137 -0.050792 8 0.86744 0.91112 -0.043684 0.91294 0.012178 weaklyHypometh 1 1 insignificant 0.99789 0.0029628 weaklyHypometh 1 1 insignificant -0.096213 0.00047975 weaklyHypometh 0.47975 insignificant 0.89315 0.82011 0.074702 9 0.88004 0.80884 0.071196 1.6164e-06 0.95798 weaklyHypermeth 0.00040411 1 weaklyHypermeth 0.0021164 0.96095 weaklyHypermeth 0.42328 1 insignificant 0.040295 0.084075 insignificant 1 insignificant 0.89315 0.92137 -0.027352 8 0.88004 0.91112 -0.031080 0.97912 0.103551 insignificant 1 1 insignificant 0.97228 0.069095 insignificant 1 1 insignificant -0.052419 0.0079800 weaklyHypometh 1 insignificant 0.82011 0.92137 -0.109505 7 0.80884 0.91112 -0.10228 0.99232 4.6012e-08 weaklyHypometh 1 4.6012e-05 weaklyHypometh 0.99713 0.00030985 weaklyHypometh 1 0.10328 insignificant -0.092713 0.00165022 weaklyHypometh 0.41256 insignificant chr3 115913163 115914163 38546 ZBTB20 ENSG00000181722 0.62127 241 7 0.60509 169 7 0.59065 97 7 0.78043 164 7 0.57511 76 7 0.62194 365 7 0.61602 136 7 0.50439 116 7 0.66413 86 7 0.53630 90 7 0.68442 241 7 0.57096 70 4 0.72590 123 7 0.87500 12 1 0.59206 129 7 0.70739 39 4 0.65040 69 4 0.66901 158 7 0.79112 168 7 0.66994 248 7 0.60397 72 7 0.63425 61 4 0.72146 132 7 0.64545 70 7 0.7517 55 4 0.65251 193 7 0.84375 74 3 0.71389 34 2 0.53988 122 7 0.68813 239 7 0.66669 172 7 0.72171 376 7 0.61554 136 7 0.61992 111 7 0.62459 140 7 0.52856 62 4 0.72966 102 7 0.63183 225 7 0.62425 194 7 0.72854 207 7 0.68135 157 7 0.82517 141 4 0.71638 159 7 0.68583 0.59291 0.63689 0.81948 0.68634 0.75948 0.74664 0.68871 0.65629 0.72536 0.68811 0.69558 0.75672 0.76023 0.67718 0.76981 0.62848 0.71634 0.80958 0.74271 0.77693 0.76027 0.75653 0.72976 0.79343 0.72349 0.76237 0.76813 0.68471 0.70593 0.72101 0.72361 0.62299 0.60388 0.65753 0.63560 0.72746 0.70725 0.75654 0.74713 0.72845 0.78629 0.77783 3 0.70647 0.72875 -0.0148742 7 0.60482 0.63701 -0.0321957 0.72969 0.043906 weaklyHypometh 1 1 insignificant 0.91979 0.025691 weaklyHypometh 1 1 insignificant -0.0293717 0.33987 insignificant 1 insignificant 0.70799 0.65206 0.046786 7 0.68042 0.64476 0.035665 0.0468266 0.99369 weaklyHypermeth 1.00000 1 insignificant 0.062898 0.98937 insignificant 1 1 insignificant 0.027562 0.420856 insignificant 1 insignificant 0.70799 0.71096 -0.022390 7 0.68042 0.70841 -0.027987 0.90293 0.22530645 insignificant 1 1.00000 insignificant 0.98508 0.14970213 insignificant 1 1.00000 insignificant -0.062561 0.14753781 insignificant 1.000000 insignificant 0.72978 0.65206 0.059269 7 0.66664 0.64476 0.021886 0.0034441 0.93958 weaklyHypermeth 0.28701 1 insignificant 0.0090544 0.98619 weaklyHypermeth 0.75454 1 insignificant 0.056933 0.123438 insignificant 1 insignificant 0.72978 0.71096 -0.007396 7 0.66664 0.70841 -0.041767 0.58827 0.267384 insignificant 1 1 insignificant 0.74578 0.404685 insignificant 1 1 insignificant -0.033190 0.428999 insignificant 1 insignificant 0.65206 0.71096 -0.067316 7 0.64476 0.70841 -0.063652 0.99762 0.0129741 weaklyHypometh 1 0.92672 insignificant 0.99992 0.0040777 weaklyHypometh 1 0.50971 insignificant -0.090123 0.064019 insignificant 1 insignificant chr3 116249596 116250596 38623 ZBTB20 ENSG00000181722 0.85134 266 6 0.79538 100 6 0.71736 99 6 0.84405 149 6 0.86944 55 3 0.86891 246 6 0.81407 72 6 0.79658 81 6 0.78133 92 6 0.85668 103 6 0.81574 149 6 0.77485 73 6 0.79113 93 6 0.66667 9 1 0.79614 112 6 0.77399 56 6 0.74758 70 6 0.81681 110 6 0.79651 106 6 0.80759 265 6 0.84821 52 6 0.78746 49 4 0.82714 100 6 0.88144 45 4 0.8623 63 4 0.68239 106 6 0.81762 53 3 0.87000 45 3 0.80506 70 5 0.87125 80 5 0.85536 142 6 0.87590 270 6 0.58973 80 4 0.75247 95 6 0.77346 102 6 0.85198 92 6 0.92628 75 6 0.77521 132 6 0.90360 209 6 0.88682 268 6 0.84714 179 6 0.85667 207 6 0.86423 163 6 0.88210 0.79055 0.81799 0.87089 0.86814 0.88214 0.86620 0.82502 0.84377 0.85226 0.84948 0.83800 0.78681 NA 0.78360 0.82288 0.80057 0.85578 0.84255 0.83987 0.84105 0.84044 0.87125 0.86315 0.88583 0.80061 0.80691 0.85712 0.79359 0.89648 0.90099 0.89478 0.67115 0.81706 0.80796 0.87013 0.93940 0.82819 0.90637 0.92722 0.89649 0.88089 0.90419 3 0.82567 0.85488 -0.0237991 6 0.80952 0.83471 -0.0251854 0.96101 0.036076 weaklyHypometh 1 1 insignificant 0.96717 0.074763 insignificant 1 1 insignificant -0.0329051 0.10826 lowCoverage 1 lowCoverage 0.82567 0.80208 0.023324 6 0.80952 0.78481 0.024715 0.1084149 0.89942 insignificant 1.00000 1 insignificant 0.328035 0.81641 insignificant 1 1 insignificant 0.020918 0.675339 insignificant 1 insignificant 0.82567 0.87135 -0.063466 6 0.80952 0.87287 -0.063346 0.99997 0.00039375 weaklyHypometh 1 0.39375 insignificant 0.99989 0.00085805 weaklyHypometh 1 0.85805 insignificant -0.072584 0.00026354 weaklyHypometh 0.057398 weaklyHypometh 0.85488 0.80208 0.047318 6 0.83471 0.78481 0.049900 0.0138898 0.94541 weaklyHypermeth 0.86811 1 insignificant 0.0528400 0.97890 insignificant 1.00000 1 insignificant 0.053823 0.310520 lowCoverage 1 lowCoverage 0.85488 0.87135 -0.040838 6 0.83471 0.87287 -0.038161 0.98665 0.043637 weaklyHypometh 1 1 insignificant 0.95070 0.089496 insignificant 1 1 insignificant -0.039679 0.056112 lowCoverage 1 lowCoverage 0.80208 0.87135 -0.088733 6 0.78481 0.87287 -0.088061 0.99987 0.0013842 weaklyHypometh 1 0.13842 insignificant 0.99986 0.0118171 weaklyHypometh 1 1.00000 insignificant -0.093502 0.099162 insignificant 1 insignificant chr3 117116331 117117331 38744 ENSG00000209194 0.67604 150 5 0.62965 63 5 0.60960 80 5 0.77619 73 5 0.78528 46 5 0.69256 216 5 0.64264 70 5 0.66406 59 5 0.61917 75 5 0.60917 65 5 0.64741 160 5 0.74628 54 5 0.66807 74 5 NA 0 0 0.68509 80 5 0.70000 56 5 0.50560 76 5 0.63086 84 5 0.62214 87 5 0.62451 178 5 0.65801 45 5 0.57302 38 5 0.74006 81 5 0.54952 38 5 0.7000 24 2 0.55314 102 5 0.79167 33 4 0.78333 27 3 0.58429 34 5 0.74127 137 5 0.65152 126 5 0.64272 224 5 0.53182 94 5 0.61939 67 5 0.63681 91 5 0.58566 51 5 0.63909 38 4 0.55963 134 5 0.67133 120 5 0.65088 114 5 0.64286 89 5 0.63220 153 5 0.59915 72 5 0.71237 0.66479 0.66249 0.80536 0.79939 0.72743 0.68426 0.70389 0.65274 0.64119 0.68847 0.77093 0.70044 NA 0.73428 0.74527 0.54521 0.65126 0.67662 0.66387 0.69634 0.60533 0.77115 0.62149 0.75100 0.59478 0.81852 0.80522 0.64127 0.76835 0.69654 0.67949 0.58405 0.65246 0.65443 0.61242 0.69633 0.60609 0.71343 0.69852 0.67771 0.66819 0.65147 4 0.66495 0.68317 -0.0045771 5 0.65595 0.66057 -0.0046219 0.77499 0.503059 insignificant 1 1 insignificant 0.87138 0.359700 insignificant 1 1 insignificant -0.0043458 0.88379 lowCoverage 1 lowCoverage 0.66495 0.61895 0.062860 5 0.65595 0.58782 0.068133 0.0020751 0.99548 weaklyHypermeth 0.17293 1 insignificant 0.019833 0.99301 weaklyHypermeth 1 1 insignificant 0.064301 0.016551 lowCoverage 1 lowCoverage 0.66495 0.64416 0.010900 5 0.65595 0.64460 0.011356 0.43692 0.54552360 insignificant 1 1.00000 insignificant 0.24449 0.80642195 insignificant 1 1.00000 insignificant 0.020417 0.29913821 lowCoverage 1.000000 lowCoverage 0.68317 0.61895 0.067695 5 0.66057 0.58782 0.072755 0.0123662 0.99632 weaklyHypermeth 0.82442 1 insignificant 0.0559019 0.99443 insignificant 1.00000 1 insignificant 0.068647 0.041502 lowCoverage 1 lowCoverage 0.68317 0.64416 0.013660 5 0.66057 0.64460 0.015978 0.44395 0.731049 insignificant 1 1 insignificant 0.25614 0.909247 insignificant 1 1 insignificant 0.024762 0.389807 lowCoverage 1 lowCoverage 0.61895 0.64416 -0.053765 5 0.58782 0.64460 -0.056777 0.98643 0.0550612 insignificant 1 1.00000 insignificant 0.97050 0.1321530 insignificant 1 1.00000 insignificant -0.043885 0.074047 lowCoverage 1 lowCoverage chr3 119114562 119115562 39072 ENSG00000206889 0.75913 333 8 0.77325 138 8 0.67406 125 8 0.78176 184 8 0.79113 113 7 0.82272 313 8 0.652136 100 8 0.76312 149 6 0.60675 107 7 0.81963 91 6 0.77020 226 8 0.69861 59 7 0.855583 136 7 0.625000 47 4 0.77232 118 8 0.75501 87 7 0.79224 75 5 0.84101 246 8 0.80322 177 7 0.822331 253 8 0.69375 40 4 0.82564 86 7 0.81575 114 7 0.81414 100 7 0.88914 72 8 0.77268 189 8 0.869290 145 5 0.89792 47 5 0.772318 133 8 0.852229 167 8 0.769489 122 8 0.78209 333 8 0.57123 153 7 0.515702 86 8 0.70419 154 6 0.75688 56 5 0.694812 117 6 0.72913 234 8 0.829219 322 7 0.79429 241 8 0.787092 210 8 0.80955 253 8 0.85122 280 8 0.839945 0.798436 0.73920 0.823927 0.82960 0.82950 0.730518 0.79391 0.692026 0.838871 0.823670 0.765272 0.878248 0.80302 0.842997 0.79777 0.84122 0.86012 0.86674 0.853174 0.84248 0.870285 0.84983 0.874393 0.899502 0.836736 0.855931 0.905359 0.796989 0.887078 0.828700 0.823631 0.773498 0.7925626 0.760286 0.7517371 0.760172 0.75271 0.85428 0.82502 0.838163 0.83563 0.87140 5 0.79967 0.818475 -0.0205902 8 0.79965 0.711845 0.087805 0.99901951 0.12385859 insignificant 1.00000 1.00000 insignificant 0.9939520 0.00252008 weaklyHypometh 1 0.50402 insignificant -0.0539094 0.0286446 weaklyHypometh 1 insignificant 0.79916 0.748750 0.0468517 8 0.75252 0.48158 0.2709326 2.2178e-03 9.9831e-01 weaklyHypermeth 4.9815e-02 1.0000e+00 weaklyHypermeth 2.4027e-02 0.99957999 weaklyHypermeth 6.2639e-01 1.00000 insignificant 0.0969677 5.6903e-02 insignificant 1.0000e+00 insignificant 0.79948 0.84686 -0.0286369 8 0.77461 0.81446 -0.0398543 7.4667e-01 0.0071497 weaklyHypometh 1.0000e+00 1 insignificant 9.1167e-01 0.018502 weaklyHypometh 1.0000e+00 1 insignificant -0.0553165 0.0115465 weaklyHypometh 0.88819 insignificant 0.818475 0.752513 0.06434277 8 0.711845 0.64211 0.0697350 1.2444e-04 9.9957e-01 weaklyHypermeth 4.4443e-03 1.0000e+00 weaklyHypermeth 2.4977e-04 9.9999e-01 weaklyHypermeth 1.7840e-02 1.000000 weaklyHypermeth 0.150877 9.6565e-03 weaklyHypermeth 4.3881e-01 insignificant 0.819005 0.84686 -0.0027074 8 0.800826 0.81446 -0.0136347 4.6442e-01 0.0572703 insignificant 1.0000e+00 1 insignificant 1.1211e-01 0.672526 insignificant 1.0000e+00 1 insignificant -0.0014071 0.9466289 insignificant 1.00000 insignificant 0.753459 0.84686 -0.070693 8 0.72237 0.81446 -0.092087 9.1629e-01 5.4174e-04 weaklyHypometh 1.0000000 2.8802e-02 weaklyHypometh 0.9402003 1.3712e-02 weaklyHypometh 1.00000 5.4848e-01 insignificant -0.152284 0.01016556 weaklyHypometh 0.56475 insignificant chr3 121119818 121120818 39231 NR1I2 ENSG00000144852 0.81018 196 5 0.81934 161 5 0.70484 89 5 0.85190 131 5 0.77830 61 5 0.78260 260 5 0.828685 80 5 0.79598 126 5 0.76828 92 5 0.81197 85 5 0.83395 176 5 0.89123 52 4 0.787802 156 5 0.650000 14 1 0.78520 138 5 0.74524 54 5 0.81545 56 4 0.80848 125 5 0.79343 113 5 0.795282 210 5 0.77892 52 4 0.78074 78 5 0.77722 143 5 0.77647 72 5 0.79694 56 5 0.79751 126 5 0.757830 102 5 0.79333 33 4 0.784415 137 5 0.786776 108 5 0.742213 135 5 0.84538 321 5 0.70172 103 5 0.740015 142 5 0.43898 90 4 0.72974 49 5 0.683232 72 5 0.76871 170 5 0.827160 158 5 0.76927 215 5 0.762773 148 5 0.81045 190 5 0.80442 164 5 0.806363 0.793415 0.69003 0.833190 0.76600 0.76874 0.831424 0.77648 0.745176 0.797607 0.829058 0.879368 0.784305 0.75391 0.780176 0.77671 0.79293 0.78736 0.78465 0.781618 0.79451 0.734906 0.76602 0.767099 0.756133 0.792821 0.756901 0.767200 0.760382 0.769093 0.727607 0.822701 0.684626 0.7526696 0.490526 0.7013641 0.651745 0.77126 0.81020 0.75433 0.738196 0.79299 0.79248 5 0.80042 0.781365 0.0158697 5 0.80152 0.790480 0.011035 0.23043948 0.74591714 insignificant 1.00000 1.00000 insignificant 0.1292349 0.80130071 insignificant 1 1.00000 insignificant 0.0080924 0.5533768 lowCoverage 1 lowCoverage 0.80042 0.714058 0.0799789 5 0.80152 0.71790 0.0836116 1.3942e-05 9.0134e-01 weaklyHypermeth 5.5769e-04 1.0000e+00 weaklyHypermeth 1.5541e-03 0.99029014 weaklyHypermeth 7.7705e-02 1.00000 weaklyHypermeth 0.1158381 6.4966e-02 lowCoverage 1.0000e+00 lowCoverage 0.80042 0.80800 0.0018290 5 0.80152 0.79911 0.0024043 4.1166e-01 0.1268345 insignificant 1.0000e+00 1 insignificant 4.1685e-01 0.210808 insignificant 1.0000e+00 1 insignificant -0.0019084 0.9117062 lowCoverage 1.00000 lowCoverage 0.781365 0.714058 0.06761235 5 0.790480 0.71790 0.0725763 2.4763e-04 6.9950e-01 weaklyHypermeth 7.9880e-03 1.0000e+00 weaklyHypermeth 6.9640e-03 9.5651e-01 weaklyHypermeth 2.3213e-01 1.000000 insignificant 0.107746 7.9977e-02 lowCoverage 1.0000e+00 lowCoverage 0.781365 0.80800 -0.0113536 5 0.790480 0.79911 -0.0086310 6.9033e-01 0.1173009 insignificant 1.0000e+00 1 insignificant 4.7827e-01 0.113246 insignificant 1.0000e+00 1 insignificant -0.0100008 0.5073082 lowCoverage 1.00000 lowCoverage 0.714058 0.80800 -0.077489 5 0.71790 0.79911 -0.081207 9.6134e-01 1.3772e-02 weaklyHypometh 1.0000000 3.9350e-01 insignificant 0.9900681 8.4390e-03 weaklyHypometh 1.00000 4.4416e-01 insignificant -0.117747 0.06203229 lowCoverage 1.00000 lowCoverage chr3 122085593 122086593 39268 ENSG00000213371 0.88040 206 6 0.74988 70 6 0.66740 68 6 0.87010 86 6 0.85139 40 6 0.83141 160 6 0.848584 101 6 0.69861 51 4 0.79063 70 6 0.76263 61 6 0.84660 125 6 0.67749 72 6 0.727451 69 6 NA 0 0 0.77140 103 6 0.80604 68 5 0.81843 81 6 0.79031 151 6 0.79690 91 6 0.908166 136 6 0.78571 18 2 0.85317 39 6 0.86699 137 6 0.91111 31 2 0.97917 51 6 0.76250 77 6 0.894231 26 2 1.00000 16 1 0.878159 53 5 0.835116 78 4 0.742857 82 6 0.78608 267 6 0.70418 80 6 0.679131 76 6 0.78022 97 6 0.86402 89 6 0.691667 32 5 0.66457 87 6 0.838812 218 6 0.83763 207 6 0.840046 170 6 0.80980 202 6 0.84285 219 6 0.878469 0.738958 0.69630 0.870516 0.81958 0.82855 0.840587 0.72351 0.797321 0.803646 0.849190 0.694119 0.747202 NA 0.769493 0.82725 0.83204 0.74549 0.83097 0.900741 0.79791 0.856369 0.89826 0.903523 0.983740 0.793293 0.858538 1.000000 0.889827 0.829390 0.755865 0.776370 0.708698 0.7032595 0.809176 0.8437347 0.655149 0.66174 0.83387 0.85549 0.843925 0.79583 0.84027 2 0.81758 0.833143 -0.0149543 6 0.81458 0.827525 -0.012946 0.81811910 0.11210079 insignificant 1.00000 1.00000 insignificant 0.9938382 0.00150140 weaklyHypometh 1 0.50402 insignificant -0.0635136 0.0356155 lowCoverage 1 lowCoverage 0.81758 0.741866 0.0767520 6 0.81458 0.73612 0.0784601 2.8817e-03 9.9989e-01 weaklyHypermeth 6.1313e-02 1.0000e+00 weaklyHypermeth 2.1914e-02 0.99941063 weaklyHypermeth 5.9228e-01 1.00000 insignificant 0.0637801 1.0788e-01 insignificant 1.0000e+00 insignificant 0.81758 0.83957 -0.0254557 6 0.81458 0.83783 -0.0232521 9.5725e-01 0.2113151 insignificant 1.0000e+00 1 insignificant 9.7281e-01 0.207749 insignificant 1.0000e+00 1 insignificant -0.0394174 0.0286613 weaklyHypometh 1.00000 insignificant 0.833143 0.741866 0.09176459 6 0.827525 0.73612 0.0914064 2.0955e-04 9.9976e-01 weaklyHypermeth 6.9850e-03 1.0000e+00 weaklyHypermeth 7.7446e-05 9.9964e-01 weaklyHypermeth 5.9573e-03 1.000000 weaklyHypermeth 0.127294 8.0479e-03 lowCoverage 4.0240e-01 lowCoverage 0.833143 0.83957 -0.0088016 6 0.827525 0.83783 -0.0103058 3.9888e-01 0.2694926 insignificant 1.0000e+00 1 insignificant 5.2029e-02 0.851071 insignificant 1.0000e+00 1 insignificant 0.0240962 0.3395113 lowCoverage 1.00000 lowCoverage 0.741866 0.83957 -0.103309 6 0.73612 0.83783 -0.101712 9.9998e-01 3.1162e-04 weaklyHypometh 1.0000000 1.9476e-02 weaklyHypometh 0.9999990 4.8398e-04 weaklyHypometh 1.00000 5.2473e-02 weaklyHypometh -0.103197 0.02090306 weaklyHypometh 0.90883 insignificant chr3 124163723 124164723 39300 ENSG00000221211 0.85139 131 5 0.67867 202 6 0.69289 94 5 0.80969 122 5 0.57517 37 3 0.77395 153 5 0.679032 74 3 0.54570 143 5 0.52465 47 4 0.78086 63 5 0.82853 252 6 0.44317 37 4 0.401489 166 5 0.392857 31 2 0.87473 43 3 0.70192 28 2 0.31400 79 5 0.63305 137 5 0.33690 55 5 0.672062 102 5 0.75885 113 5 0.53477 103 4 0.77467 65 5 0.47008 38 4 0.92308 49 4 0.70760 241 6 0.556037 75 5 0.50000 14 0 0.767045 32 2 0.576120 257 6 0.563807 233 6 0.86096 224 5 0.08548 156 6 0.014493 100 5 0.26667 11 0 0.00000 54 4 0.204762 108 6 0.12053 205 6 0.695536 99 3 0.85131 221 6 0.646897 127 5 0.40566 96 4 0.62429 177 6 0.840997 0.654452 0.64066 0.680963 0.63350 0.77848 0.709725 0.51334 0.428579 0.722330 0.767619 0.506094 0.246365 0.54541 0.832117 0.48485 0.18461 0.68731 0.29257 0.676032 0.79178 0.559925 0.69008 0.478389 0.828704 0.708516 0.557501 0.650298 0.797179 0.547527 0.416903 0.867706 0.038804 0.0054348 0.052006 0.0050344 0.038690 0.13033 0.72034 0.79482 0.570346 0.31988 0.53961 1 0.63409 0.661357 -0.0266134 5 0.65114 0.588222 0.062914 0.36514051 0.76020083 insignificant 1.00000 1.00000 insignificant 0.6137055 0.65410499 insignificant 1 1.00000 insignificant -0.0405480 0.4959067 lowCoverage 1 lowCoverage 0.63377 0.088328 0.5648231 5 0.57879 0.17653 0.4022625 5.1660e-25 1.0000e+00 hypermethylated 8.6099e-23 1.0000e+00 hypermethylated 2.0048e-12 0.99999999 hypermethylated 1.0024e-09 1.00000 hypermethylated 0.5102152 4.0138e-07 lowCoverage 6.6897e-05 lowCoverage 0.63409 0.65278 -0.0130674 5 0.65114 0.62569 0.0254497 6.3340e-01 0.4774251 insignificant 1.0000e+00 1 insignificant 7.6874e-01 0.648427 insignificant 1.0000e+00 1 insignificant -0.0192020 0.8215009 lowCoverage 1.00000 lowCoverage 0.661357 0.088748 0.58664743 5 0.588222 0.19859 0.3896308 8.3445e-26 9.9983e-01 hypermethylated 1.6689e-23 1.0000e+00 hypermethylated 1.3595e-10 1.0000e+00 hypermethylated 4.5317e-08 1.000000 hypermethylated 0.550763 3.5596e-07 lowCoverage 8.8990e-05 lowCoverage 0.661357 0.65278 0.0107720 5 0.588222 0.62569 -0.0374648 8.3311e-01 0.3462510 insignificant 1.0000e+00 1 insignificant 8.7768e-01 0.752586 insignificant 1.0000e+00 1 insignificant 0.0213460 0.8063202 lowCoverage 1.00000 lowCoverage 0.088748 0.65278 -0.576200 5 0.19859 0.62569 -0.427096 9.9993e-01 3.3248e-21 hypomethylated 1.0000000 3.3248e-18 hypomethylated 0.9999989 5.6154e-08 hypomethylated 1.00000 5.6154e-05 hypomethylated -0.529417 0.00046897 lowCoverage 0.10040 lowCoverage chr3 124187873 124188873 39306 ENSG00000221211 0.06386 329 4 0.11830 237 6 0.23187 248 6 0.10488 306 4 0.17227 184 6 0.26250 353 6 0.070306 273 6 0.14882 227 6 0.09020 212 6 0.05413 220 6 0.10293 326 6 0.14994 204 6 0.061686 258 6 0.052632 59 1 0.10479 298 6 0.10797 229 6 0.27791 99 6 0.13358 343 4 0.11110 219 6 0.043064 234 4 0.13113 104 4 0.21895 160 4 0.13571 187 6 0.07672 143 6 0.10938 68 4 0.03234 363 6 0.065077 269 6 0.08105 130 6 0.070022 200 6 0.038869 345 6 0.093524 295 6 0.07415 285 6 0.26581 144 4 0.424161 139 6 0.33333 131 1 0.21886 45 4 0.391956 99 4 0.22959 172 4 0.051527 302 5 0.13253 204 4 0.042674 235 4 0.11121 296 4 0.10110 259 4 0.077092 0.086505 0.18537 0.088375 0.13227 0.27215 0.056085 0.12584 0.086047 0.051156 0.087552 0.092778 0.032042 0.11842 0.069326 0.12612 0.21774 0.14388 0.13636 0.043005 0.10161 0.081883 0.08141 0.083426 0.043823 0.034019 0.034253 0.061152 0.051882 0.031366 0.072058 0.052941 0.276018 0.2412475 0.143275 0.1439922 0.341672 0.30867 0.05703 0.16030 0.080357 0.15138 0.08915 4 0.11898 0.068654 0.0529644 6 0.12451 0.075314 0.049199 0.00094572 0.99865445 weaklyHypermeth 0.94572 1.00000 insignificant 0.0012131 0.99674878 weaklyHypermeth 1 1.00000 insignificant 0.0292266 0.1762124 insignificant 1 insignificant 0.11898 0.269863 -0.1548336 4 0.12451 0.37480 -0.2502882 1.0000e+00 9.0177e-14 lowCoverage 1.0000e+00 9.0177e-11 lowCoverage 9.9963e-01 0.00043902 lowCoverage 1.0000e+00 0.14634 lowCoverage -0.1874826 1.7675e-03 lowCoverage 1.1927e-01 lowCoverage 0.11898 0.12346 0.0149638 4 0.12451 0.08600 0.0385129 3.3755e-02 0.9333479 lowCoverage 9.9238e-01 1 lowCoverage 5.7123e-02 0.786763 lowCoverage 1.0000e+00 1 lowCoverage 0.0353295 0.1547987 lowCoverage 1.00000 lowCoverage 0.068654 0.269863 -0.20784343 4 0.075314 0.37480 -0.2994877 1.0000e+00 4.9913e-15 lowCoverage 1.0000e+00 4.9913e-12 lowCoverage 9.9993e-01 3.4488e-05 lowCoverage 1.0000e+00 0.034488 lowCoverage -0.216709 8.2482e-04 lowCoverage 6.8735e-02 lowCoverage 0.068654 0.12346 -0.0413450 4 0.075314 0.08600 -0.0106865 4.5430e-01 0.0099735 lowCoverage 1.0000e+00 1 lowCoverage 3.3616e-01 0.030826 lowCoverage 1.0000e+00 1 lowCoverage 0.0061028 0.7938750 lowCoverage 1.00000 lowCoverage 0.269863 0.12346 0.152709 4 0.37480 0.08600 0.288801 7.2643e-07 1.0000e+00 lowCoverage 0.0003384 1.0000e+00 lowCoverage 0.0017723 9.9998e-01 lowCoverage 0.59076 1.0000e+00 lowCoverage 0.222812 0.00067161 lowCoverage 0.10040 lowCoverage chr3 124485460 124486460 39323 SEC22A ENSG00000121542 0.91523 377 8 0.86841 319 8 0.91261 392 8 0.87885 377 8 0.86501 200 8 0.87213 493 8 0.875889 321 8 0.90094 405 8 0.87827 268 8 0.94223 400 8 0.91279 423 8 0.90077 249 8 0.927414 342 8 0.917895 265 8 0.92911 461 8 0.83153 164 8 0.87037 50 5 0.96117 438 8 0.92277 432 8 0.879659 366 8 0.95045 130 8 0.92828 203 8 0.94340 279 8 0.93385 218 8 0.92912 156 8 0.93321 482 8 0.837335 225 8 0.79909 266 8 0.951567 303 8 0.951293 384 8 0.941864 354 8 0.93264 337 8 0.87254 216 8 0.916159 188 8 0.66667 160 6 0.94120 79 8 0.790269 252 8 0.86449 375 8 0.940457 447 8 0.92912 319 8 0.926508 385 8 0.93642 287 8 0.89444 389 8 0.908527 0.848108 0.90761 0.885259 0.86158 0.87733 0.865270 0.90008 0.869453 0.936199 0.918781 0.901079 0.929701 0.90288 0.925454 0.79846 0.83300 0.95364 0.92146 0.892411 0.93142 0.926580 0.94107 0.930019 0.934509 0.922713 0.848780 0.932529 0.953300 0.941628 0.937608 0.922418 0.838461 0.9008591 0.721931 0.9577412 0.878364 0.85654 0.93217 0.93388 0.930746 0.93237 0.88772 8 0.90567 0.927415 -0.0229921 8 0.91734 0.881732 0.035609 0.98837256 0.01336059 weaklyHypometh 1.00000 1.00000 insignificant 0.9976417 0.00174273 weaklyHypometh 1 0.50402 insignificant -0.0211881 0.1958472 insignificant 1 insignificant 0.90562 0.836879 0.0661361 8 0.90701 0.84872 0.0582915 9.5496e-03 9.3817e-01 weaklyHypermeth 1.9099e-01 1.0000e+00 insignificant 6.4690e-01 0.43563695 insignificant 1.0000e+00 1.00000 insignificant 0.0562659 2.3015e-01 insignificant 1.0000e+00 insignificant 0.90562 0.92885 -0.0200099 8 0.90701 0.92643 -0.0194224 9.3427e-01 0.0665562 insignificant 1.0000e+00 1 insignificant 9.3390e-01 0.041469 weaklyHypometh 1.0000e+00 1 insignificant -0.0272380 0.0279869 weaklyHypometh 1.00000 insignificant 0.927436 0.836220 0.09042333 8 0.900251 0.75442 0.1458354 1.1887e-03 9.9895e-01 weaklyHypermeth 3.1282e-02 1.0000e+00 weaklyHypermeth 1.5101e-01 9.7865e-01 insignificant 1.0000e+00 1.000000 insignificant 0.077454 1.2184e-01 insignificant 1.0000e+00 insignificant 0.927671 0.92885 0.0029581 8 0.929449 0.92643 0.0030176 4.4121e-01 0.7752952 insignificant 1.0000e+00 1 insignificant 3.1237e-01 0.843494 insignificant 1.0000e+00 1 insignificant -0.0060499 0.7145749 insignificant 1.00000 insignificant 0.836879 0.92885 -0.086909 8 0.84872 0.92643 -0.077714 9.9638e-01 2.4510e-02 weaklyHypometh 1.0000000 6.4501e-01 insignificant 0.9689226 2.5102e-01 insignificant 1.00000 1.0000e+00 insignificant -0.083504 0.09750029 insignificant 1.00000 insignificant chr3 125061651 125062651 39344 ENSG00000207002 0.82124 202 6 0.76605 123 7 0.63168 122 7 0.84070 156 6 0.79211 101 6 0.80565 229 6 0.801965 113 6 0.90935 106 6 0.73166 105 7 0.78771 103 6 0.79562 230 7 0.87467 97 5 0.777025 92 6 0.928463 44 3 0.83288 112 5 0.65834 93 5 0.80952 99 5 0.78713 157 5 0.84842 131 6 0.872523 219 7 0.90566 56 4 0.94416 69 5 0.80987 152 7 0.84913 61 4 0.92063 38 3 0.87210 141 7 0.880217 121 5 0.90049 63 4 0.850340 104 5 0.836251 138 7 0.856217 112 6 0.80648 271 7 0.68541 105 6 0.838179 68 6 0.83436 216 7 0.90152 30 3 0.664356 107 6 0.74942 173 7 0.910104 151 6 0.84804 186 6 0.794542 159 6 0.86893 147 5 0.71680 162 6 0.793030 0.757574 0.73779 0.815277 0.82223 0.81746 0.821901 0.88428 0.800332 0.807872 0.829563 0.823449 0.822048 0.86339 0.858063 0.72990 0.85717 0.79346 0.82965 0.851123 0.91124 0.956105 0.83465 0.857567 0.939021 0.867848 0.852204 0.895266 0.855875 0.809687 0.850769 0.815515 0.719640 0.8235752 0.852063 0.9265932 0.706262 0.77502 0.90807 0.82836 0.823591 0.83531 0.81932 2 0.81466 0.843137 -0.0228197 7 0.80486 0.828406 -0.023541 0.97194229 0.06329439 insignificant 1.00000 1.00000 insignificant 0.9990016 0.00247696 weaklyHypometh 1 0.50402 insignificant -0.0656607 0.0030671 weaklyHypometh 1 insignificant 0.81466 0.799714 0.0189002 7 0.80486 0.78020 0.0246616 6.7829e-02 6.6019e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3404e-01 0.59389470 insignificant 1.0000e+00 1.00000 insignificant 0.0247620 5.7189e-01 insignificant 1.0000e+00 insignificant 0.81435 0.82609 -0.0303583 6 0.70426 0.85322 -0.1489610 9.4421e-01 0.0905678 insignificant 1.0000e+00 1 insignificant 9.9029e-01 0.065943 insignificant 1.0000e+00 1 insignificant -0.0240487 0.5409158 insignificant 1.00000 insignificant 0.843137 0.799714 0.05221179 7 0.828406 0.78020 0.0482029 2.8551e-04 8.7779e-01 weaklyHypermeth 8.9221e-03 1.0000e+00 weaklyHypermeth 6.5511e-04 9.5630e-01 weaklyHypermeth 3.7624e-02 1.000000 weaklyHypermeth 0.090423 6.6039e-02 insignificant 1.0000e+00 insignificant 0.843137 0.82565 -0.0057290 6 0.828406 0.83225 -0.0038427 6.8327e-01 0.2651079 insignificant 1.0000e+00 1 insignificant 3.0631e-01 0.608645 insignificant 1.0000e+00 1 insignificant 0.0416121 0.2939240 insignificant 1.00000 insignificant 0.799714 0.82565 -0.065873 6 0.78020 0.83225 -0.052046 8.7277e-01 1.5745e-03 weaklyHypometh 1.0000000 6.2762e-02 weaklyHypometh 0.8706899 9.5811e-03 weaklyHypometh 1.00000 4.6377e-01 insignificant -0.048811 0.36290364 insignificant 1.00000 insignificant chr3 126876923 126877923 39427 OSBPL11 ENSG00000144909 0.63359 169 6 0.57379 107 5 0.68236 73 4 0.69343 120 6 0.67468 38 3 0.76868 199 6 0.682937 42 5 0.57304 75 3 0.57202 63 3 0.68329 66 6 0.80358 161 5 0.79444 27 2 0.727998 88 6 0.700000 35 3 0.71183 69 6 0.58333 27 1 0.72619 31 2 0.80811 156 6 0.73399 99 6 0.772339 130 6 0.71429 19 1 0.76603 33 3 0.66745 81 6 0.57222 25 1 0.79630 33 2 0.64522 132 6 0.757086 44 3 0.56296 35 3 0.653952 84 6 0.653477 90 6 0.572697 101 4 0.64423 188 6 0.68603 74 5 0.570421 75 4 0.67657 109 6 0.57222 31 2 0.672584 75 5 0.52386 110 6 0.688348 137 6 0.75173 158 6 0.701496 145 6 0.71639 127 6 0.69495 130 6 0.803842 0.684882 0.76344 0.858007 0.82225 0.85990 0.857361 0.79652 0.776848 0.844072 0.878600 0.889908 0.839735 0.87708 0.816514 0.79817 0.88139 0.86285 0.79082 0.849496 0.83463 0.839450 0.78836 0.758410 0.868502 0.823831 0.823322 0.801223 0.835299 0.792636 0.789390 0.821274 0.778148 0.6562489 0.771515 0.7538226 0.765556 0.66684 0.85799 0.86618 0.838838 0.83791 0.83898 1 0.78423 0.771098 0.0167775 4 0.79588 0.620649 0.175235 0.05964122 0.99149450 lowCoverage 1.00000 1.00000 lowCoverage 0.0872350 0.98610760 lowCoverage 1 1.00000 lowCoverage 0.0278232 0.3356773 lowCoverage 1 lowCoverage 0.78300 0.691983 0.0815043 6 0.69383 0.63020 0.0636301 2.2501e-04 9.8658e-01 weaklyHypermeth 6.2502e-03 1.0000e+00 weaklyHypermeth 3.4089e-03 0.94185289 weaklyHypermeth 1.4347e-01 1.00000 insignificant 0.0780339 4.3321e-02 lowCoverage 1.0000e+00 lowCoverage 0.78423 0.80918 -0.0162535 6 0.79588 0.69738 0.0985037 9.8781e-01 0.7402692 insignificant 1.0000e+00 1 insignificant 9.2811e-01 0.812338 insignificant 1.0000e+00 1 insignificant -0.0156020 0.4556314 lowCoverage 1.00000 lowCoverage 0.774005 0.691983 0.06916781 4 0.672640 0.63020 0.0424438 1.0503e-03 9.0474e-01 lowCoverage 2.8386e-02 1.0000e+00 lowCoverage 3.6969e-02 8.2826e-01 lowCoverage 9.7286e-01 1.000000 lowCoverage 0.050211 1.9312e-01 lowCoverage 1.0000e+00 lowCoverage 0.771098 0.80918 -0.0316915 4 0.620649 0.69738 -0.0767316 9.3066e-01 0.3091908 lowCoverage 1.0000e+00 1 lowCoverage 9.8304e-01 0.479718 lowCoverage 1.0000e+00 1 lowCoverage -0.0434252 0.1056854 lowCoverage 1.00000 lowCoverage 0.691983 0.80980 -0.098650 6 0.63020 0.71274 -0.082541 9.9113e-01 2.5293e-03 weaklyHypometh 1.0000000 9.3676e-02 weaklyHypometh 0.9662701 3.4919e-03 weaklyHypometh 1.00000 2.0540e-01 insignificant -0.093636 0.02007433 lowCoverage 0.90883 lowCoverage chr3 127471531 127472531 39442 ALDH1L1 ENSG00000144908 0.86438 192 5 0.83151 95 5 0.66667 42 3 0.92868 82 5 0.78000 34 3 0.95854 226 5 0.681429 30 4 0.79179 96 5 0.83333 28 5 0.90667 51 3 0.86097 180 5 0.86667 16 0 0.924638 83 5 0.925000 58 5 0.76667 69 5 0.49333 21 3 NA 0 0 0.91746 180 5 0.83362 280 5 0.908564 221 5 0.88889 71 3 1.00000 6 0 0.89118 72 5 0.97143 57 5 0.88889 9 0 0.90078 192 5 0.707986 112 4 0.50000 24 3 0.940187 205 5 0.927364 157 5 0.893300 211 5 0.91885 199 5 0.57748 123 5 0.625098 146 5 0.32624 141 3 0.50000 11 2 0.582179 72 5 0.42569 358 5 0.790414 122 5 0.82458 192 5 0.890129 113 5 0.84153 114 5 0.65263 80 5 0.865248 0.875166 0.66667 0.901961 0.96667 0.96192 0.619048 0.74389 0.722222 0.844444 0.851624 0.777778 0.929952 0.87500 0.666667 0.26667 NA 0.95767 0.89918 0.922403 0.88889 1.000000 0.81863 1.000000 0.888889 0.935515 0.679976 0.833333 0.930615 0.984496 0.924731 0.923718 0.642809 0.8515520 0.326241 NA 0.627441 0.61413 0.76768 0.74764 0.898467 0.81922 0.66667 0 0.87248 0.896578 -0.0243923 5 0.87387 0.890242 -0.016374 0.91222411 0.23845349 insignificant 1.00000 1.00000 insignificant 0.9328986 0.03999524 weaklyHypometh 1 1.00000 insignificant -0.0406543 0.3998975 lowCoverage 1 lowCoverage 0.87248 0.531140 0.3432717 5 0.87387 0.46901 0.4048592 7.5573e-22 1.0000e+00 hypermethylated 1.0796e-19 1.0000e+00 hypermethylated 7.2884e-07 0.99999971 hypermethylated 9.1105e-05 1.00000 hypermethylated 0.3223023 2.3160e-04 lowCoverage 2.5733e-02 lowCoverage 0.87248 0.80032 0.0749059 5 0.87387 0.80580 0.0680663 2.1687e-02 0.9664840 weaklyHypermeth 6.9957e-01 1 insignificant 1.9335e-01 0.949171 insignificant 1.0000e+00 1 insignificant 0.0285583 0.5688763 lowCoverage 1.00000 lowCoverage 0.896578 0.531140 0.36101967 5 0.890242 0.46901 0.4212335 1.3708e-14 1.0000e+00 hypermethylated 1.5231e-12 1.0000e+00 hypermethylated 2.2203e-06 1.0000e+00 hypermethylated 2.4670e-04 1.000000 hypermethylated 0.362957 6.3123e-05 lowCoverage 7.0137e-03 lowCoverage 0.896578 0.80032 0.1014034 5 0.890242 0.80580 0.0844406 2.1402e-03 0.9917234 weaklyHypermeth 8.5610e-02 1 weaklyHypermeth 3.9420e-03 0.997767 weaklyHypermeth 2.3188e-01 1 insignificant 0.0692126 0.2425231 lowCoverage 1.00000 lowCoverage 0.531140 0.80032 -0.284301 5 0.46901 0.80580 -0.336793 1.0000e+00 3.5271e-07 hypomethylated 1.0000000 3.9190e-05 hypomethylated 0.9999763 5.8767e-04 hypomethylated 1.00000 5.2473e-02 hypomethylated -0.293744 0.00097395 lowCoverage 0.10040 lowCoverage chr3 128135367 128136367 39458 CHCHD6 ENSG00000159685 0.82275 215 5 0.56109 232 6 0.73658 86 6 0.79363 159 5 0.74282 98 6 0.63536 191 6 0.660348 121 5 0.71836 150 6 0.68515 87 6 0.74210 66 4 0.79970 220 6 0.86343 43 4 0.771561 98 5 0.781296 87 6 0.81590 106 4 0.71267 55 4 0.59483 211 2 0.65018 177 5 0.68922 64 3 0.748004 134 6 0.57083 49 3 0.42857 30 1 0.62400 126 4 0.64118 66 6 0.85442 80 3 0.75997 214 5 0.717336 51 3 0.65104 40 3 0.710274 139 5 0.754460 210 6 0.548518 157 4 0.88621 181 6 0.53700 199 6 0.587169 73 4 0.72319 207 5 0.31250 10 0 0.598067 165 5 0.59993 167 6 0.438996 182 5 0.65553 156 5 0.725059 178 5 0.55277 114 4 0.57312 178 5 0.842029 0.700734 0.77325 0.816552 0.86702 0.82961 0.806227 0.75826 0.715257 0.799331 0.842250 0.818182 0.783285 0.72810 0.773401 0.74460 0.70528 0.67182 0.85638 0.769869 0.89798 0.452168 0.82651 0.792378 0.849279 0.803474 0.686889 0.888889 0.730816 0.846445 0.798429 0.937299 0.523617 0.7907648 0.802264 0.2681293 0.705521 0.75871 0.48974 0.61571 0.714558 0.53055 0.64081 2 0.77953 0.801936 -0.0266042 6 0.73264 0.620887 0.111748 0.73341839 0.77361406 insignificant 1.00000 1.00000 insignificant 0.8697416 0.85701911 insignificant 1 1.00000 insignificant 0.0473484 0.2696164 lowCoverage 1 lowCoverage 0.77954 0.666261 0.1052092 6 0.69714 0.56663 0.1305066 2.3313e-05 9.9996e-01 weaklyHypermeth 8.7372e-04 1.0000e+00 weaklyHypermeth 1.6661e-03 0.99994797 weaklyHypermeth 7.9338e-02 1.00000 weaklyHypermeth 0.1666066 2.8404e-02 lowCoverage 1.0000e+00 lowCoverage 0.77932 0.68193 0.1553599 5 0.66936 0.41301 0.2563519 1.6662e-05 0.8683590 weaklyHypermeth 9.8009e-04 1 weaklyHypermeth 4.4016e-02 0.850877 weaklyHypermeth 1.0000e+00 1 insignificant 0.1371531 0.0439854 lowCoverage 1.00000 lowCoverage 0.801943 0.666261 0.13288078 6 0.563504 0.56663 -0.0031294 1.7316e-04 9.9990e-01 weaklyHypermeth 5.9712e-03 1.0000e+00 weaklyHypermeth 4.7314e-03 9.9208e-01 weaklyHypermeth 1.7524e-01 1.000000 insignificant 0.119258 1.0594e-01 lowCoverage 1.0000e+00 lowCoverage 0.801795 0.68193 0.2257855 5 0.507949 0.41301 0.0949382 2.4834e-02 0.9576265 weaklyHypermeth 8.0108e-01 1 insignificant 3.8865e-01 0.958462 insignificant 1.0000e+00 1 insignificant 0.0898048 0.1765820 lowCoverage 1.00000 lowCoverage 0.665854 0.68278 0.088951 5 0.51246 0.46464 0.047826 8.3051e-01 1.6800e-02 inconclusive 1.0000000 4.6668e-01 insignificant 0.8986702 6.1805e-02 insignificant 1.00000 1.0000e+00 insignificant -0.029453 0.69852948 lowCoverage 1.00000 lowCoverage chr3 128187177 128188177 39460 CHCHD6 ENSG00000159685 0.88303 114 5 0.78288 133 5 0.76089 113 6 0.83217 106 5 0.75949 66 5 0.79653 128 6 0.844334 101 5 0.72083 109 5 0.87385 103 5 0.65642 83 5 0.86687 130 5 0.65737 56 4 0.802955 138 5 NA 0 0 0.77199 104 5 0.75092 55 5 0.46168 52 5 0.46341 129 5 0.85875 149 6 0.730940 143 5 0.76974 48 4 0.56818 52 5 0.68417 112 6 0.88294 43 4 0.76667 51 4 0.81766 253 6 0.728157 84 5 0.85399 48 4 0.565439 120 4 0.685415 220 5 0.734114 188 6 0.81414 136 5 0.31477 198 5 0.296296 108 5 0.47548 187 5 0.54444 37 5 0.442474 68 6 0.66062 221 5 0.672648 132 5 0.61868 160 5 0.666171 95 5 0.58156 190 5 0.50487 140 5 0.847786 0.769165 0.69215 0.742278 0.72921 0.83792 0.838735 0.86587 0.836000 0.755276 0.841722 0.742174 0.818122 NA 0.777061 0.66165 0.55816 0.53458 0.87766 0.743123 0.80834 0.686766 0.76918 0.918043 0.766835 0.836270 0.830649 0.886839 0.658041 0.827228 0.809962 0.922631 0.261050 0.3246628 0.471612 0.6329480 0.510561 0.77891 0.56716 0.66443 0.734746 0.56054 0.52240 3 0.78066 0.833703 -0.0488790 5 0.76054 0.784568 -0.024025 0.91906045 0.01428088 weaklyHypometh 1.00000 1.00000 insignificant 0.7917787 0.04538761 weaklyHypometh 1 1.00000 insignificant 0.0121135 0.7663790 lowCoverage 1 lowCoverage 0.78066 0.457875 0.2964875 5 0.76054 0.42059 0.3399498 4.5969e-15 1.0000e+00 hypermethylated 4.1790e-13 1.0000e+00 hypermethylated 3.2526e-05 0.99999773 hypermethylated 2.9569e-03 1.00000 hypermethylated 0.2956498 1.7822e-03 lowCoverage 1.1927e-01 lowCoverage 0.78131 0.64575 0.1563524 4 0.82041 0.60486 0.2155454 1.6010e-07 0.9994402 lowCoverage 1.1436e-05 1 lowCoverage 3.5130e-04 0.999911 lowCoverage 2.5093e-02 1 lowCoverage 0.1425440 0.0052757 lowCoverage 0.43964 lowCoverage 0.833703 0.457875 0.32585533 6 0.784568 0.42059 0.3639743 1.6016e-14 1.0000e+00 hypermethylated 1.6016e-12 1.0000e+00 hypermethylated 6.2752e-06 1.0000e+00 hypermethylated 6.2752e-04 1.000000 hypermethylated 0.283536 2.2643e-03 lowCoverage 1.5095e-01 lowCoverage 0.833703 0.64548 0.2024976 5 0.784568 0.58426 0.2003072 1.2037e-12 0.9991825 hypermethylated 3.0093e-10 1 hypermethylated 3.4605e-05 0.985859 hypermethylated 4.3256e-03 1 hypermethylated 0.1304305 0.0105058 lowCoverage 0.80814 lowCoverage 0.457875 0.64548 -0.111531 5 0.42059 0.58426 -0.163667 9.9891e-01 2.5451e-04 weaklyHypometh 1.0000000 1.6968e-02 weaklyHypometh 0.9987864 4.4860e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant -0.153106 0.04625532 weaklyHypometh 1.00000 insignificant chr3 128200656 128201656 39461 PLXNA1 ENSG00000114554 0.91694 117 6 0.80362 231 8 0.82299 263 9 0.84589 83 6 0.86385 163 9 0.88291 297 8 0.909665 248 9 0.85041 247 9 0.86097 240 9 0.92952 248 9 0.90369 308 9 0.78191 190 9 0.930126 256 9 0.898263 78 3 0.92541 211 8 0.69211 162 9 0.84249 136 8 0.83436 96 4 0.90929 238 9 0.790484 187 7 0.94428 123 9 0.81482 95 3 0.91686 182 9 0.88441 157 9 0.96104 40 3 0.87303 335 9 0.910803 137 9 0.97033 154 9 0.829204 213 8 0.897636 281 9 0.905736 271 9 0.93105 217 8 0.55928 238 9 0.643023 185 7 0.75175 336 7 0.85714 19 2 0.820891 220 9 0.74132 231 8 0.911632 158 6 0.81645 154 6 0.695246 99 6 0.89986 120 6 0.89085 134 5 0.884187 0.781000 0.80066 0.859639 0.90123 0.87497 0.890428 0.85509 0.806384 0.930882 0.889166 0.691088 0.923359 0.89016 0.863657 0.65299 0.79495 0.89865 0.86150 0.851784 0.92093 0.859557 0.88076 0.841427 0.952636 0.882893 0.847959 0.941984 0.861149 0.927024 0.892663 0.861702 0.772149 0.6637639 0.750482 0.9699499 0.831810 0.78608 0.85952 0.79147 0.780093 0.86021 0.85284 4 0.86572 0.897506 -0.0350309 9 0.87699 0.908012 -0.031020 0.99782912 0.00041151 weaklyHypometh 1.00000 0.41151 insignificant 0.9996833 0.00015629 weaklyHypometh 1 0.15629 insignificant -0.0435214 0.0332644 weaklyHypometh 1 insignificant 0.86572 0.784378 0.0815723 9 0.87699 0.71867 0.1583200 1.2751e-11 1.1758e-01 weaklyHypermeth 1.0626e-09 1.0000e+00 weaklyHypermeth 3.8760e-03 0.05998991 weaklyHypermeth 1.5504e-01 1.00000 insignificant 0.1308454 3.3140e-02 weaklyHypermeth 1.0000e+00 insignificant 0.86572 0.83609 0.0233162 5 0.87699 0.85744 0.0195477 5.3962e-02 0.5356932 insignificant 1.0000e+00 1 insignificant 2.3459e-01 0.346501 insignificant 1.0000e+00 1 insignificant 0.0169394 0.7082560 insignificant 1.00000 insignificant 0.897506 0.784378 0.12110147 9 0.908012 0.71867 0.1893403 1.2699e-09 9.5102e-01 weaklyHypermeth 8.4663e-08 1.0000e+00 weaklyHypermeth 1.0174e-03 8.3819e-01 weaklyHypermeth 5.0138e-02 1.000000 weaklyHypermeth 0.174367 1.0531e-02 weaklyHypermeth 4.3881e-01 insignificant 0.897506 0.83609 0.0607210 5 0.908012 0.85744 0.0505681 3.2064e-06 0.9624235 weaklyHypermeth 2.1376e-04 1 weaklyHypermeth 2.8833e-04 0.829847 weaklyHypermeth 2.0595e-02 1 weaklyHypermeth 0.0604608 0.2170163 insignificant 1.00000 insignificant 0.784378 0.83609 -0.052787 5 0.71867 0.85744 -0.138772 4.7500e-01 4.3195e-03 weaklyHypometh 1.0000000 1.4895e-01 insignificant 0.3836651 1.8212e-01 insignificant 1.00000 1.0000e+00 insignificant -0.113906 0.09376141 insignificant 1.00000 insignificant chr3 128541013 128542013 39473 ENSG00000201288 0.72663 377 8 0.59660 202 8 0.73864 245 8 0.65363 337 8 0.74393 104 8 0.71861 463 8 0.794214 168 8 0.79188 231 8 0.77062 232 8 0.79218 209 8 0.84281 267 8 0.81318 145 8 0.645857 251 8 0.867965 67 3 0.69758 225 8 0.86437 150 6 0.61478 148 8 0.71660 398 8 0.75077 147 8 0.567496 352 8 0.76958 77 8 0.53661 277 8 0.83191 261 8 0.75621 154 8 0.85379 117 8 0.65384 324 8 0.659822 191 8 0.73130 160 8 0.785691 159 8 0.655668 281 8 0.593740 247 8 0.80145 368 8 0.11581 254 8 0.022569 183 8 0.28882 250 6 0.30920 106 7 0.094657 219 8 0.44164 259 8 0.494435 500 8 0.65388 425 8 0.560973 422 8 0.62114 383 8 0.55897 408 8 0.764578 0.669696 0.73383 0.746153 0.74897 0.80191 0.842898 0.79237 0.759169 0.879013 0.888228 0.835217 0.584974 0.79862 0.779559 0.96065 0.68087 0.71024 0.70077 0.650503 0.81153 0.558777 0.83716 0.758634 0.830087 0.718206 0.738523 0.805875 0.772052 0.655315 0.650566 0.908133 0.136441 0.0218254 0.325019 0.3226725 0.128268 0.43916 0.52711 0.62275 0.518185 0.61513 0.57170 8 0.76367 0.735092 0.0174468 8 0.70617 0.693468 0.012703 0.31135635 0.59816707 insignificant 1.00000 1.00000 insignificant 0.5092471 0.29497016 insignificant 1 1.00000 insignificant 0.0162831 0.6410001 insignificant 1 insignificant 0.76367 0.214792 0.5341142 8 0.70617 0.18851 0.5176636 8.0624e-48 1.0000e+00 hypermethylated 8.0624e-45 1.0000e+00 hypermethylated 2.1539e-18 1.00000000 hypermethylated 2.1539e-15 1.00000 hypermethylated 0.5233010 2.6852e-04 hypermethylated 2.6852e-02 hypermethylated 0.76367 0.57530 0.1788282 8 0.70617 0.60662 0.0995505 1.6303e-15 0.5387458 weaklyHypermeth 1.6303e-12 1 weaklyHypermeth 3.2389e-10 0.736210 weaklyHypermeth 3.2389e-07 1 weaklyHypermeth 0.1575378 0.0013761 weaklyHypermeth 0.17202 insignificant 0.735092 0.214792 0.53063025 8 0.693468 0.18851 0.5049608 7.9058e-29 1.0000e+00 hypermethylated 3.9529e-26 1.0000e+00 hypermethylated 5.5232e-15 1.0000e+00 hypermethylated 5.5232e-12 1.000000 hypermethylated 0.507018 1.8944e-04 hypermethylated 1.7222e-02 hypermethylated 0.735092 0.57530 0.1908218 8 0.693468 0.60662 0.0868477 6.4568e-08 0.8583291 weaklyHypermeth 7.1743e-06 1 weaklyHypermeth 7.8454e-08 0.923593 weaklyHypermeth 3.9227e-05 1 weaklyHypermeth 0.1412546 0.0038825 weaklyHypermeth 0.41685 insignificant 0.214792 0.57530 -0.343957 8 0.18851 0.60662 -0.418113 1.0000e+00 6.0062e-11 hypomethylated 1.0000000 1.5015e-08 hypomethylated 1.0000000 1.7267e-06 hypomethylated 1.00000 8.6333e-04 hypomethylated -0.365763 0.00147983 weaklyHypometh 0.13453 insignificant chr3 128572414 128573414 39476 ENSG00000201288 0.75363 73 6 0.76567 100 5 0.32185 59 4 0.86335 105 6 0.88889 7 0 0.80679 157 6 0.321429 19 3 0.87109 109 6 0.89722 45 5 0.80321 62 5 0.83719 151 6 0.80000 6 0 0.744009 115 5 NA 0 0 0.75769 33 2 0.87500 10 0 0.60000 5 0 0.71772 150 4 0.82157 90 6 0.694331 125 6 0.91754 42 4 0.53869 84 6 0.82540 66 6 0.73056 49 4 0.76667 53 4 0.82727 121 6 0.742669 88 6 0.47222 11 0 0.821246 89 6 0.771078 213 6 0.736143 191 6 0.87390 150 6 0.14070 129 6 0.179504 128 5 0.12937 60 3 0.13889 74 4 0.325108 36 3 0.31341 176 6 0.303613 112 6 0.68150 158 6 0.429948 86 4 0.39799 96 5 0.36564 163 6 0.775790 0.762099 0.37623 0.840091 0.82079 0.82415 0.454856 0.85743 0.937984 0.815589 0.843862 0.957819 0.727198 NA 0.741205 0.79040 0.45631 0.69264 0.87108 0.697537 0.90576 0.547370 0.84865 0.805814 0.738372 0.818889 0.729328 0.484496 0.837580 0.833995 0.756859 0.890691 0.115195 0.1178295 0.126394 0.1124031 0.334793 0.36014 0.26108 0.63405 0.409503 0.32776 0.37300 0 0.74173 0.771824 -0.0325263 6 0.75743 0.779904 -0.022476 0.93229845 0.25055297 insignificant 1.00000 1.00000 insignificant 0.6107924 0.73398651 insignificant 1 1.00000 insignificant -0.0077030 0.8862520 lowCoverage 1 lowCoverage 0.74173 0.189055 0.5545648 6 0.75743 0.21411 0.5433139 4.3611e-31 1.0000e+00 hypermethylated 1.4537e-28 1.0000e+00 hypermethylated 3.4050e-12 1.00000000 hypermethylated 1.1350e-09 1.00000 hypermethylated 0.5397482 1.9549e-08 lowCoverage 3.9099e-06 lowCoverage 0.74173 0.40488 0.3236849 6 0.75743 0.46079 0.2966366 1.4828e-12 1.0000000 hypermethylated 2.4713e-10 1 hypermethylated 1.1232e-07 1.000000 hypermethylated 2.8081e-05 1 hypermethylated 0.3085074 0.0045040 lowCoverage 0.40946 lowCoverage 0.771824 0.189055 0.58717890 6 0.779904 0.21411 0.5657895 8.4788e-30 1.0000e+00 hypermethylated 8.4788e-27 1.0000e+00 hypermethylated 2.0992e-12 1.0000e+00 hypermethylated 1.0496e-09 1.000000 hypermethylated 0.547451 6.2546e-08 lowCoverage 2.0849e-05 lowCoverage 0.771824 0.40488 0.3587020 6 0.779904 0.46079 0.3191121 4.2739e-13 1.0000000 hypermethylated 1.4246e-10 1 hypermethylated 1.2722e-07 1.000000 hypermethylated 4.2408e-05 1 hypermethylated 0.3162104 0.0041685 weaklyHypermeth 0.41685 insignificant 0.189055 0.40488 -0.232802 6 0.21411 0.46079 -0.246677 9.9998e-01 7.0357e-07 hypomethylated 1.0000000 7.0357e-05 hypomethylated 0.9999617 1.7146e-04 hypomethylated 1.00000 2.4494e-02 hypomethylated -0.231241 0.01924550 lowCoverage 0.90883 lowCoverage chr3 129804909 129805909 39531 C3orf27 ENSG00000198685 0.74702 148 9 0.72356 344 10 0.82635 298 10 0.82184 133 9 0.80738 125 10 0.81642 312 10 0.905977 197 10 0.85771 242 8 0.81928 193 10 0.91777 221 10 0.89139 404 10 0.87779 114 10 0.838782 223 10 0.892641 113 6 0.91365 310 9 0.87585 105 9 0.85234 70 7 0.88856 108 6 0.91742 274 10 0.881232 265 10 0.88490 161 9 0.73449 97 6 0.69784 249 10 0.80754 128 10 0.87399 64 4 0.88977 417 10 0.874819 202 9 0.67613 127 7 0.795008 199 6 0.783323 442 10 0.920514 387 10 0.93861 317 10 0.84323 267 10 0.723993 211 10 0.67515 182 10 0.51128 85 8 0.541820 160 9 0.94815 318 6 0.942317 187 9 0.91129 185 7 0.927949 113 7 0.86716 132 9 0.82435 128 9 0.903300 0.839980 0.88129 0.904847 0.80520 0.91587 0.875391 0.84580 0.814020 0.895433 0.869516 0.898162 0.860454 0.88627 0.922375 0.91018 0.87974 0.90273 0.90538 0.875233 0.90830 0.870263 0.89815 0.815112 0.857902 0.891639 0.845294 0.868918 0.880190 0.881682 0.916039 0.911748 0.834531 0.6220729 0.777954 0.5039619 0.725916 0.92126 0.91871 0.85321 0.894544 0.84275 0.80108 4 0.88349 0.895699 -0.0102257 10 0.81022 0.756087 0.054133 0.94040386 0.17033131 insignificant 1.00000 1.00000 insignificant 0.8641551 0.40405057 insignificant 1 1.00000 insignificant 0.0305707 0.2907537 insignificant 1 insignificant 0.88349 0.794767 0.0896607 10 0.81022 0.58655 0.2236718 2.4464e-05 9.7661e-01 weaklyHypermeth 8.7372e-04 1.0000e+00 weaklyHypermeth 8.6096e-03 0.96735004 weaklyHypermeth 2.8699e-01 1.00000 insignificant 0.1463772 8.8336e-02 insignificant 1.0000e+00 insignificant 0.88385 0.86577 0.0127930 7 0.84937 0.91048 -0.0611050 4.0467e-01 0.0201030 inconclusive 1.0000e+00 1 insignificant 6.6799e-01 0.012227 inconclusive 1.0000e+00 1 insignificant -0.0409641 0.1438202 insignificant 1.00000 insignificant 0.895699 0.794767 0.10072433 10 0.756087 0.58655 0.1695388 2.8993e-03 9.7912e-01 weaklyHypermeth 6.9032e-02 1.0000e+00 weaklyHypermeth 4.9095e-02 9.9396e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.115806 1.6407e-01 insignificant 1.0000e+00 insignificant 0.896552 0.86577 0.0233311 7 0.825928 0.91048 -0.0845470 2.2579e-01 0.2168768 insignificant 1.0000e+00 1 insignificant 4.4156e-01 0.018552 inconclusive 1.0000e+00 1 insignificant -0.0715349 0.0502780 insignificant 1.00000 insignificant 0.797209 0.86577 -0.079089 7 0.71621 0.91048 -0.194263 9.5286e-01 4.0290e-02 weaklyHypometh 1.0000000 9.3699e-01 insignificant 0.9639423 6.2967e-04 weaklyHypometh 1.00000 5.2473e-02 weaklyHypometh -0.187341 0.04181515 weaklyHypometh 1.00000 insignificant chr3 129805087 129806087 39532 C3orf27 ENSG00000198685 0.74702 148 9 0.72356 344 10 0.82635 298 10 0.82184 133 9 0.80738 125 10 0.81642 312 10 0.905977 197 10 0.85771 242 8 0.81928 193 10 0.91777 221 10 0.89139 404 10 0.87779 114 10 0.838782 223 10 0.892641 113 6 0.91365 310 9 0.87585 105 9 0.85234 70 7 0.88856 108 6 0.91742 274 10 0.881232 265 10 0.88490 161 9 0.73449 97 6 0.69784 249 10 0.80754 128 10 0.87399 64 4 0.88977 417 10 0.874819 202 9 0.67613 127 7 0.795008 199 6 0.783323 442 10 0.920514 387 10 0.93861 317 10 0.84323 267 10 0.723993 211 10 0.67515 182 10 0.51128 85 8 0.541820 160 9 0.94815 318 6 0.942317 187 9 0.91129 185 7 0.927949 113 7 0.86716 132 9 0.82435 128 9 0.903300 0.839980 0.88129 0.904847 0.80520 0.91587 0.875391 0.84580 0.814020 0.895433 0.869516 0.898162 0.860454 0.88627 0.922375 0.91018 0.87974 0.90273 0.90538 0.875233 0.90830 0.870263 0.89815 0.815112 0.857902 0.891639 0.845294 0.868918 0.880190 0.881682 0.916039 0.911748 0.834531 0.6220729 0.777954 0.5039619 0.725916 0.92126 0.91871 0.85321 0.894544 0.84275 0.80108 4 0.88349 0.895699 -0.0102257 10 0.81022 0.756087 0.054133 0.94040386 0.17033131 insignificant 1.00000 1.00000 insignificant 0.8641551 0.40405057 insignificant 1 1.00000 insignificant 0.0305707 0.2907537 insignificant 1 insignificant 0.88349 0.794767 0.0896607 10 0.81022 0.58655 0.2236718 2.4464e-05 9.7661e-01 weaklyHypermeth 8.7372e-04 1.0000e+00 weaklyHypermeth 8.6096e-03 0.96735004 weaklyHypermeth 2.8699e-01 1.00000 insignificant 0.1463772 8.8336e-02 insignificant 1.0000e+00 insignificant 0.88385 0.86577 0.0127930 7 0.84937 0.91048 -0.0611050 4.0467e-01 0.0201030 inconclusive 1.0000e+00 1 insignificant 6.6799e-01 0.012227 inconclusive 1.0000e+00 1 insignificant -0.0409641 0.1438202 insignificant 1.00000 insignificant 0.895699 0.794767 0.10072433 10 0.756087 0.58655 0.1695388 2.8993e-03 9.7912e-01 weaklyHypermeth 6.9032e-02 1.0000e+00 weaklyHypermeth 4.9095e-02 9.9396e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.115806 1.6407e-01 insignificant 1.0000e+00 insignificant 0.896552 0.86577 0.0233311 7 0.825928 0.91048 -0.0845470 2.2579e-01 0.2168768 insignificant 1.0000e+00 1 insignificant 4.4156e-01 0.018552 inconclusive 1.0000e+00 1 insignificant -0.0715349 0.0502780 insignificant 1.00000 insignificant 0.797209 0.86577 -0.079089 7 0.71621 0.91048 -0.194263 9.5286e-01 4.0290e-02 weaklyHypometh 1.0000000 9.3699e-01 insignificant 0.9639423 6.2967e-04 weaklyHypometh 1.00000 5.2473e-02 weaklyHypometh -0.187341 0.04181515 weaklyHypometh 1.00000 insignificant chr3 130824775 130825775 39545 PLXND1 ENSG00000004399 0.75339 194 9 0.70386 352 11 0.60601 257 11 0.83639 74 7 0.73885 152 10 0.78607 237 13 0.567367 217 10 0.70548 312 11 0.67684 243 11 0.79020 181 11 0.78130 413 13 0.80883 138 9 0.454080 400 13 0.859284 43 4 0.68008 215 13 0.61246 92 6 0.71295 149 8 0.52983 157 13 0.70241 290 13 0.706382 263 12 0.80373 153 13 0.49431 110 10 0.76989 240 11 0.82743 142 10 0.75400 84 7 0.76857 529 13 0.697735 225 13 0.75577 91 8 0.692969 311 11 0.659994 360 11 0.769187 421 13 0.67604 311 13 0.68297 345 13 0.758408 248 11 0.64796 115 7 0.62086 43 4 0.846581 93 10 0.43061 522 13 0.693549 154 11 0.60297 223 10 0.561334 122 8 0.32812 181 10 0.37538 181 10 0.810463 0.712461 0.61815 0.810228 0.74274 0.80591 0.588232 0.67209 0.744998 0.745165 0.797567 0.800077 0.472137 0.76989 0.692971 0.76077 0.72446 0.59987 0.74648 0.683371 0.88767 0.529276 0.74534 0.886296 0.754501 0.773946 0.735401 0.829500 0.659935 0.721246 0.786973 0.733609 0.709566 0.8613519 0.710566 0.6513253 0.934122 0.45314 0.64449 0.65859 0.556268 0.39312 0.41157 6 0.69377 0.746389 -0.0617441 11 0.70759 0.675194 0.032401 0.99813917 0.00504703 weaklyHypometh 1.00000 1.00000 insignificant 0.9914056 0.05883537 insignificant 1 1.00000 insignificant -0.0218661 0.5325454 insignificant 1 insignificant 0.69370 0.587116 0.0869620 11 0.68510 0.59254 0.0925592 1.3737e-03 9.9535e-01 weaklyHypermeth 3.4343e-02 1.0000e+00 weaklyHypermeth 4.3359e-01 0.47177819 insignificant 1.0000e+00 1.00000 insignificant 0.0360383 5.8034e-01 insignificant 1.0000e+00 insignificant 0.69370 0.52729 0.1789071 10 0.68510 0.51181 0.1732910 5.9574e-11 0.9999125 weaklyHypermeth 7.4467e-09 1 weaklyHypermeth 9.7437e-08 0.999996 weaklyHypermeth 2.8081e-05 1 weaklyHypermeth 0.1883322 0.0502999 insignificant 1.00000 insignificant 0.746640 0.587116 0.15829637 11 0.727131 0.59254 0.1345889 2.4811e-06 9.9884e-01 weaklyHypermeth 1.0787e-04 1.0000e+00 weaklyHypermeth 1.8967e-01 8.0956e-01 insignificant 1.0000e+00 1.000000 insignificant 0.057904 3.8778e-01 insignificant 1.0000e+00 insignificant 0.746640 0.52729 0.2318122 10 0.727131 0.51181 0.2153208 2.2531e-15 0.9999999 hypermethylated 2.2531e-12 1 hypermethylated 2.7687e-08 0.999997 hypermethylated 2.7687e-05 1 hypermethylated 0.2101983 0.0350531 weaklyHypermeth 1.00000 insignificant 0.587116 0.52729 0.094199 10 0.59254 0.51181 0.080732 7.5714e-02 9.7401e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0066246 9.9979e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.152294 0.12814173 insignificant 1.00000 insignificant chr3 131162003 131163003 39551 TMCC1 ENSG00000172765 0.85704 201 3 0.72795 211 5 0.67325 58 2 0.86258 124 4 0.85069 52 3 0.90495 322 5 0.868182 43 4 0.89898 134 5 0.72087 69 2 0.94824 26 2 0.88317 210 5 0.14583 14 1 0.907092 80 2 0.915079 59 2 0.82738 66 2 0.33333 8 1 NA 0 0 0.84913 136 4 0.94010 268 2 0.899840 263 5 0.82419 78 5 0.76000 29 4 0.90374 119 5 0.90625 62 4 0.92857 22 4 0.82817 241 5 0.881877 141 4 0.77083 11 0 0.841537 302 2 0.926084 214 5 0.870899 269 5 0.93697 316 5 0.49975 179 5 0.452381 194 2 0.10588 256 5 NA 0 0 0.584280 116 4 0.49358 336 5 0.799049 161 5 0.87619 164 5 0.911235 92 2 0.82401 59 2 0.83502 138 5 0.806971 0.775550 0.44145 0.794439 0.74631 0.85723 0.686654 0.79955 0.830959 0.916646 0.813025 0.287234 0.739928 0.80365 0.793693 0.91505 NA 0.71901 0.84754 0.835033 0.73518 0.961702 0.94652 0.640957 0.781155 0.813322 0.896186 0.460771 0.854602 0.838497 0.851292 0.904226 0.364889 0.1930091 0.011264 NA 0.427780 0.10028 0.70557 0.84167 0.780263 0.72979 0.76208 1 0.81093 0.861419 -0.0482762 5 0.84110 0.874758 -0.033656 0.97913251 0.03752758 weaklyHypometh 1.00000 1.00000 insignificant 0.7676340 0.11208198 insignificant 1 1.00000 insignificant -0.0747332 0.1582665 lowCoverage 1 lowCoverage 0.81093 0.266914 0.5635742 5 0.84110 0.39848 0.4426192 2.6498e-19 1.0000e+00 hypermethylated 2.9442e-17 1.0000e+00 hypermethylated 8.2197e-08 0.99999990 hypermethylated 1.1742e-05 1.00000 hypermethylated 0.3630189 6.9783e-03 lowCoverage 3.4892e-01 lowCoverage 0.81093 0.78990 0.0141373 5 0.84110 0.84390 -0.0027948 5.9855e-01 0.3500658 insignificant 1.0000e+00 1 insignificant 6.1410e-01 0.421860 insignificant 1.0000e+00 1 insignificant -0.0589059 0.2705395 lowCoverage 1.00000 lowCoverage 0.861419 0.266914 0.59435215 5 0.874758 0.39848 0.4762749 6.2238e-16 1.0000e+00 hypermethylated 8.8912e-14 1.0000e+00 hypermethylated 3.9536e-07 1.0000e+00 hypermethylated 5.6480e-05 1.000000 hypermethylated 0.437752 5.3263e-03 lowCoverage 2.8033e-01 lowCoverage 0.861419 0.78990 0.0664894 5 0.874758 0.84390 0.0308608 8.1065e-02 0.3664500 insignificant 1.0000e+00 1 insignificant 2.5892e-01 0.420697 insignificant 1.0000e+00 1 insignificant 0.0158273 0.5623779 lowCoverage 1.00000 lowCoverage 0.266914 0.78990 -0.554854 5 0.39848 0.84390 -0.445414 1.0000e+00 2.5189e-07 hypomethylated 1.0000000 3.1487e-05 hypomethylated 0.9999978 8.4235e-06 hypomethylated 1.00000 2.8078e-03 hypomethylated -0.421925 0.00590811 lowCoverage 0.36926 lowCoverage chr3 131280341 131281341 39555 ENSG00000180770 0.78571 47 2 0.70730 89 6 0.65810 35 2 0.91319 26 1 0.77202 53 5 0.81861 113 5 0.588889 39 4 0.80456 55 5 0.86842 40 4 0.89358 61 5 0.75618 159 6 0.53976 48 5 0.629630 49 5 NA 0 0 0.79167 42 2 1.00000 24 2 0.62500 33 2 0.98611 21 1 0.76515 92 5 0.823636 117 6 0.75160 27 2 0.91795 20 1 0.59111 46 2 0.87873 54 5 1.00000 7 1 0.85446 95 6 0.866667 35 4 0.95000 43 5 0.814106 61 5 0.808521 103 6 0.799496 104 6 0.76284 104 6 0.67479 69 6 0.726023 104 5 0.72228 73 5 0.95385 17 1 0.836905 49 5 0.84150 96 6 0.922222 47 1 0.81778 59 5 0.964286 15 1 0.93333 38 1 0.72500 23 1 0.905644 0.856048 0.81335 0.845422 0.84854 0.92592 0.929218 0.90880 0.842430 0.925311 0.858919 0.818370 0.817558 NA 0.962963 0.95023 0.86523 0.93313 0.90208 0.903255 0.87907 0.913992 0.80905 0.930913 0.982435 0.875257 0.909465 0.984568 0.862156 0.862805 0.899419 0.880185 0.816072 0.5385532 0.780661 0.8148148 0.916667 0.85964 0.93484 0.86145 0.897070 0.97942 0.82785 1 0.82852 0.848355 -0.0279468 5 0.76522 0.822297 -0.057073 0.92596131 0.10723164 insignificant 1.00000 1.00000 insignificant 0.9423789 0.09620691 insignificant 1 1.00000 insignificant -0.0578242 0.1850581 lowCoverage 1 lowCoverage 0.82852 0.757353 0.0438419 5 0.76522 0.76763 -0.0024077 1.0737e-01 3.5664e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4645e-01 0.25772782 insignificant 1.0000e+00 1.00000 insignificant -0.0174247 7.4175e-01 lowCoverage 1.0000e+00 lowCoverage 0.82852 0.91209 -0.0411966 1 0.76522 0.88499 -0.1197686 9.9783e-01 0.0078507 lowCoverage 1.0000e+00 1 lowCoverage 9.9785e-01 0.010749 lowCoverage 1.0000e+00 1 lowCoverage -0.0973909 0.1048075 lowCoverage 1.00000 lowCoverage 0.848355 0.757353 0.07269763 5 0.822297 0.76763 0.0546654 3.9668e-02 7.2468e-01 weaklyHypermeth 7.2469e-01 1.0000e+00 insignificant 9.0546e-02 7.7628e-01 insignificant 1.0000e+00 1.000000 insignificant 0.040400 4.5676e-01 lowCoverage 1.0000e+00 lowCoverage 0.848355 0.91209 -0.0295359 1 0.822297 0.88499 -0.0626955 9.8806e-01 0.0199900 lowCoverage 1.0000e+00 1 lowCoverage 9.9436e-01 0.051214 lowCoverage 1.0000e+00 1 lowCoverage -0.0395667 0.4841068 lowCoverage 1.00000 lowCoverage 0.757353 0.91209 -0.132789 1 0.76763 0.88499 -0.117361 9.9934e-01 1.6318e-03 lowCoverage 1.0000000 6.2762e-02 lowCoverage 0.9998772 1.1844e-02 lowCoverage 1.00000 4.9352e-01 lowCoverage -0.079966 0.22505273 lowCoverage 1.00000 lowCoverage chr3 131368946 131369946 39560 ENSG00000214311 0.91697 262 7 0.80059 181 7 0.90417 64 7 0.92334 170 7 0.80915 72 5 0.88280 91 6 0.767500 82 6 0.81828 141 7 0.89621 58 5 0.81833 72 4 0.90532 240 7 0.80000 24 0 0.835227 122 7 0.782857 69 6 0.82778 74 4 0.84694 51 3 NA 0 0 0.86537 582 7 0.87747 190 7 0.898767 108 7 0.93557 64 5 0.92857 88 3 0.81970 178 7 0.95918 49 5 0.98254 101 4 0.94762 181 7 0.821882 72 3 0.94444 16 0 0.812474 133 7 0.872994 213 7 0.967749 197 7 0.95422 91 7 0.71863 171 8 0.877242 207 7 0.48082 148 5 0.73333 26 2 0.828505 76 7 0.91063 250 7 0.840918 156 7 0.95752 182 7 0.958149 306 7 0.84783 233 7 0.83538 279 7 0.933487 0.859049 0.94749 0.953760 0.84803 0.92326 0.847831 0.92493 0.902491 0.920472 0.895112 0.931507 0.947540 0.93053 0.950533 0.89939 NA 0.94999 0.90968 0.896391 0.93262 0.965753 0.93501 0.980431 0.974353 0.957894 0.881415 0.940009 0.913413 0.948774 0.964545 0.942824 0.910096 0.8950754 0.599153 0.7911059 0.899968 0.95715 0.94952 0.94526 0.954780 0.95798 0.95831 2 0.90803 0.939986 -0.0360144 7 0.81538 0.861436 -0.046058 0.99946744 0.00104611 weaklyHypometh 1.00000 0.52306 insignificant 0.9991018 0.00628196 weaklyHypometh 1 1.00000 insignificant -0.0608206 0.0100281 weaklyHypometh 1 insignificant 0.90803 0.825740 0.0784015 7 0.81538 0.64455 0.1708271 1.1618e-05 9.9985e-01 weaklyHypermeth 4.8408e-04 1.0000e+00 weaklyHypermeth 2.1751e-02 0.99666230 weaklyHypermeth 5.9228e-01 1.00000 insignificant 0.0932313 2.0530e-01 insignificant 1.0000e+00 insignificant 0.90803 0.94723 -0.0339653 7 0.81538 0.84832 -0.0329405 9.8721e-01 0.0319978 weaklyHypometh 1.0000e+00 1 insignificant 9.6824e-01 0.078767 insignificant 1.0000e+00 1 insignificant -0.0365356 0.2848282 insignificant 1.00000 insignificant 0.939986 0.825740 0.11291427 7 0.861436 0.64455 0.2168852 5.1065e-07 1.0000e+00 weaklyHypermeth 2.4317e-05 1.0000e+00 weaklyHypermeth 3.3822e-04 9.9999e-01 weaklyHypermeth 2.2548e-02 1.000000 weaklyHypermeth 0.154052 6.0040e-02 insignificant 1.0000e+00 insignificant 0.939986 0.94723 -0.0013361 7 0.861436 0.84832 0.0131176 7.8804e-01 0.7102480 insignificant 1.0000e+00 1 insignificant 6.2133e-01 0.918815 insignificant 1.0000e+00 1 insignificant 0.0242850 0.4950593 insignificant 1.00000 insignificant 0.825740 0.94723 -0.114828 7 0.64455 0.84832 -0.203768 1.0000e+00 4.3574e-04 weaklyHypometh 1.0000000 2.5632e-02 weaklyHypometh 0.9992033 7.0445e-03 weaklyHypometh 1.00000 3.9136e-01 insignificant -0.129767 0.10597263 insignificant 1.00000 insignificant chr3 136073692 136074692 39650 EPHB1 ENSG00000154928 0.89766 141 5 0.85952 76 5 0.72085 128 6 0.93975 196 5 0.95000 45 3 0.92497 359 7 0.875148 87 5 0.80496 73 5 0.92328 67 4 0.82963 86 5 0.93962 117 5 0.92430 48 5 0.929086 107 5 0.822092 64 5 0.92164 131 5 0.96000 34 5 0.80952 26 3 0.89437 211 7 0.92234 85 5 0.942005 304 7 0.84885 51 4 0.82551 74 5 0.92827 119 5 0.98413 80 5 0.54286 31 3 0.90390 77 5 0.767780 50 3 0.88690 63 5 0.874722 86 5 0.911001 134 5 0.843661 117 5 0.94527 252 7 0.82398 105 5 0.920000 20 2 0.96296 31 3 0.80000 12 2 0.839367 198 7 0.96878 152 5 0.970370 120 4 0.87320 115 5 0.895484 205 5 0.96571 75 2 0.91929 132 5 0.840907 0.828153 0.66055 0.899551 0.97297 0.89139 0.811437 0.87213 0.907667 0.912613 0.933011 0.870409 0.941773 0.79020 0.887327 0.95676 0.87628 0.89287 0.91797 0.914630 0.87578 0.786583 0.88972 0.968468 0.740541 0.821376 0.726132 0.875563 0.868318 0.908236 0.867916 0.950518 0.860254 0.8864865 0.925593 0.8847521 0.880446 0.96581 0.93282 0.92821 0.898149 0.92621 0.89602 0 0.88721 0.889771 -0.0033223 5 0.90383 0.893641 0.010193 0.50292119 0.68909206 insignificant 1.00000 1.00000 insignificant 0.4417160 0.68810678 insignificant 1 1.00000 insignificant 0.0342991 0.3532524 lowCoverage 1 lowCoverage 0.88721 0.889961 -0.0066132 5 0.90383 0.86681 0.0370238 1.2770e-01 6.2720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4069e-01 0.41452175 insignificant 1.0000e+00 1.00000 insignificant 0.0036878 9.1480e-01 lowCoverage 1.0000e+00 lowCoverage 0.88721 0.91345 -0.0253634 5 0.90383 0.91936 -0.0155293 9.4812e-01 0.3487277 insignificant 1.0000e+00 1 insignificant 9.8218e-01 0.190155 insignificant 1.0000e+00 1 insignificant -0.0352761 0.1713243 lowCoverage 1.00000 lowCoverage 0.889771 0.889961 -0.00051334 5 0.893641 0.86681 0.0268310 4.8740e-01 7.1663e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4828e-01 4.4346e-01 insignificant 1.0000e+00 1.000000 insignificant -0.030611 5.0402e-01 lowCoverage 1.0000e+00 lowCoverage 0.889771 0.91345 -0.0235441 5 0.893641 0.91936 -0.0257221 9.2701e-01 0.3257727 insignificant 1.0000e+00 1 insignificant 9.8566e-01 0.176827 insignificant 1.0000e+00 1 insignificant -0.0695752 0.0876660 lowCoverage 1.00000 lowCoverage 0.889961 0.91345 -0.015166 5 0.86681 0.91936 -0.052553 8.5520e-01 3.4901e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.6574254 7.3890e-01 insignificant 1.00000 1.0000e+00 insignificant -0.038964 0.30662730 lowCoverage 1.00000 lowCoverage chr3 144469292 144470292 40163 ENSG00000181814 0.67744 199 6 0.66188 113 6 0.60152 47 6 0.61779 176 6 0.75390 85 5 0.67559 60 6 0.69468 88 5 0.65994 86 5 0.75980 63 3 0.67877 42 4 0.68556 125 6 0.75661 36 4 0.80373 136 6 0.72561 62 6 0.72273 76 6 0.71429 30 4 0.71111 43 1 0.70106 276 5 0.84444 49 5 0.69868 35 5 0.80000 16 2 0.83333 13 0 0.72003 122 6 0.70408 32 4 0.74814 88 4 0.69451 90 6 0.63889 41 3 0.88889 16 0 0.63786 139 6 0.69861 79 5 0.69915 56 5 0.64383 67 6 0.64262 103 6 0.52273 83 4 0.68688 87 6 0.56667 18 3 0.60468 98 6 0.71574 66 6 0.72242 137 6 0.71295 117 6 0.68687 174 6 0.69336 105 4 0.75043 112 6 0.76341 0.71311 0.55199 0.72393 0.77534 0.68557 0.70918 0.71374 0.72135 0.75807 0.73159 0.80506 0.81217 0.72988 0.76367 0.65030 0.63646 0.76086 0.82731 0.69476 0.97095 0.76042 0.77969 0.65997 0.68432 0.74883 0.64323 0.88889 0.72507 0.73266 0.73480 0.72655 0.64150 0.56802 0.65519 0.73125 0.59304 0.76654 0.74654 0.79936 0.71963 0.71356 0.78542 2 0.71921 0.71202 0.0124664 5 0.70727 0.69041 0.0168692 0.38476 0.74726 insignificant 1 1 insignificant 0.71494 0.30978 insignificant 1 1 insignificant -0.0183529 0.49351 lowCoverage 1 lowCoverage 0.71921 0.63077 0.097060 6 0.70727 0.62541 0.081862 4.1013e-05 0.98680 weaklyHypermeth 0.013671 1 weaklyHypermeth 0.019692 0.99004 weaklyHypermeth 1 1 insignificant 0.0840381 0.036085 weaklyHypermeth 1 insignificant 0.71921 0.73178 -0.0050341 6 0.70727 0.71898 -0.011704 0.74128 4.4301e-01 insignificant 1 1.000000 insignificant 0.71020 3.9982e-01 insignificant 1 1.0000000 insignificant -0.0059485 7.3322e-01 insignificant 1.0000000 insignificant 0.71202 0.63077 0.077542 5 0.69041 0.62541 0.064993 0.00096447 0.82660 weaklyHypermeth 0.24112 1 insignificant 0.0072291 0.98696 weaklyHypermeth 1 1 insignificant 0.102391 0.019861 lowCoverage 1 lowCoverage 0.71202 0.73178 -0.027458 5 0.69041 0.71898 -0.028573 0.86295 2.1945e-01 insignificant 1 1.000000 insignificant 0.71087 0.60317703 insignificant 1 1.00000 insignificant 0.012404 0.6341545 lowCoverage 1.00000 lowCoverage 0.63077 0.73178 -0.10708 6 0.62541 0.71898 -0.093566 0.99821 0.00217135 weaklyHypometh 1 0.36189 insignificant 0.99266 0.0411407 weaklyHypometh 1 1 insignificant -0.089987 0.0282771 weaklyHypometh 1 insignificant chr3 145606242 145607242 40269 ENSG00000208787,ENSG00000222778 0.57078 242 6 0.55629 94 6 0.41667 102 6 0.58293 143 6 0.51951 46 6 0.51887 192 6 0.47601 65 6 0.45820 60 6 0.44198 72 5 0.54242 63 6 0.57841 133 6 0.43750 54 6 0.56316 76 6 NA 0 0 0.46944 64 6 0.48310 59 5 0.43016 33 6 0.59693 135 6 0.47358 67 6 0.61804 159 6 0.56667 29 4 0.40952 39 6 0.53484 150 6 0.69048 38 5 0.56944 31 4 0.45586 116 6 0.57044 42 6 0.47778 32 4 0.48889 38 2 0.52809 69 6 0.58485 65 6 0.56714 247 6 0.50556 50 6 0.45910 82 6 0.43492 74 5 0.61667 35 6 0.60225 38 4 0.49551 107 6 0.65192 150 6 0.60673 171 6 0.65588 160 6 0.60761 182 6 0.66535 152 6 0.58785 0.56079 0.42569 0.58916 0.52405 0.53117 0.48982 0.47407 0.43648 0.54957 0.59373 0.42898 0.56707 NA 0.47399 0.55909 0.44416 0.59518 0.47290 0.63012 0.58025 0.42948 0.55078 0.70883 0.55149 0.46494 0.57693 0.50212 0.52495 0.54568 0.60641 0.58277 0.51380 0.47973 0.47194 0.61125 0.60017 0.50791 0.66241 0.61300 0.67154 0.61851 0.67117 3 0.52932 0.53906 -0.0046095 6 0.53405 0.53511 -0.0010606 0.13942 0.27287 insignificant 1 1 insignificant 0.40729 0.14463 insignificant 1 1 insignificant -0.0246848 0.34492 insignificant 1 insignificant 0.52932 0.50259 0.016636 6 0.53405 0.50736 0.026692 3.2813e-02 0.59801 weaklyHypermeth 1.000000 1 insignificant 0.416940 0.19163 insignificant 1 1 insignificant -0.0066851 0.848230 insignificant 1 insignificant 0.52932 0.62822 -0.1032486 6 0.53405 0.63644 -0.102386 0.99999 1.3813e-05 weaklyHypometh 1 0.013813 weaklyHypometh 1.00000 2.0315e-06 weaklyHypometh 1 0.0020315 weaklyHypometh -0.1251826 7.9644e-06 weaklyHypometh 0.0079644 weaklyHypometh 0.53906 0.50259 0.022910 6 0.53511 0.50736 0.027753 0.06022365 0.63445 insignificant 1.00000 1 insignificant 0.2903259 0.57468 insignificant 1 1 insignificant 0.018000 0.637610 insignificant 1 insignificant 0.53906 0.62822 -0.098643 6 0.53511 0.63644 -0.101326 1.00000 9.7706e-05 weaklyHypometh 1 0.097706 weaklyHypometh 0.99998 0.00041585 weaklyHypometh 1 0.41523 insignificant -0.100498 0.0009514 weaklyHypometh 0.31713 insignificant 0.50259 0.62822 -0.11998 6 0.50736 0.63644 -0.129078 0.99996 0.00014121 weaklyHypometh 1 0.04707 weaklyHypometh 0.99818 0.0030250 weaklyHypometh 1 1 insignificant -0.118498 0.0097063 weaklyHypometh 1 insignificant chr3 157376422 157377422 40849 KCNAB1 ENSG00000169282 0.91579 289 6 0.85043 65 6 0.92361 119 6 0.96579 240 6 0.90152 40 3 0.91027 235 6 0.94261 92 6 0.84638 117 6 0.72900 105 6 0.91235 196 6 0.89436 135 6 0.90843 107 6 0.73387 131 6 0.92287 140 6 0.90953 135 6 0.89550 101 3 0.81667 30 3 0.92145 134 6 0.88547 64 6 0.92841 157 6 0.59048 23 1 0.95265 104 6 0.89768 132 6 0.93333 45 6 0.91414 59 6 0.90117 100 6 0.91813 88 6 0.87868 70 6 0.89150 89 6 0.88571 98 6 0.91659 55 6 0.89409 158 6 0.86806 42 6 0.88429 79 6 0.60000 71 3 0.92803 56 6 0.71232 85 6 0.85523 75 6 0.94851 280 6 0.98519 182 6 0.94919 212 6 0.95247 262 6 0.96738 103 5 0.90888 0.79294 0.92217 0.95640 0.89916 0.90095 0.93761 0.81112 0.84024 0.89564 0.86958 0.90279 0.83836 0.91992 0.90955 0.85384 0.79811 0.90664 0.84330 0.87874 0.64465 0.95078 0.88471 0.90943 0.90995 0.86180 0.88949 0.86834 0.85957 0.85402 0.87412 0.86051 0.84296 0.86021 0.50544 0.93193 0.80651 0.84466 0.93783 0.97883 0.94086 0.95623 0.95324 3 0.89163 0.88149 0.0108304 6 0.77542 0.86549 -0.0900654 0.52134 0.40784 insignificant 1 1 insignificant 0.75732 0.44634 insignificant 1 1 insignificant 0.0045361 0.88357 insignificant 1 insignificant 0.89163 0.87990 0.024038 6 0.77542 0.75436 0.021057 2.6707e-01 0.93313 insignificant 1.000000 1 insignificant 0.459071 0.94840 insignificant 1 1 insignificant 0.0777274 0.194997 insignificant 1 insignificant 0.89265 0.94899 -0.0585259 6 0.90466 0.95608 -0.051425 0.99998 2.4901e-04 weaklyHypometh 1 0.124506 insignificant 0.99998 1.1226e-04 weaklyHypometh 1 0.0561316 weaklyHypometh -0.0748318 8.2674e-05 weaklyHypometh 0.0413371 weaklyHypometh 0.88149 0.87990 0.021233 6 0.86549 0.75436 0.111122 0.27848035 0.93707 insignificant 1.00000 1 insignificant 0.3700925 0.97944 insignificant 1 1 insignificant 0.073191 0.242039 insignificant 1 insignificant 0.88212 0.94899 -0.069487 6 0.89862 0.95608 -0.057460 0.99757 1.0949e-03 weaklyHypometh 1 0.547467 insignificant 0.99792 0.00083045 weaklyHypometh 1 0.41523 insignificant -0.079368 0.0146822 weaklyHypometh 1.00000 insignificant 0.88206 0.94899 -0.07405 6 0.88009 0.95608 -0.075991 0.99825 0.00736921 weaklyHypometh 1 0.91360 insignificant 0.99832 0.0104597 weaklyHypometh 1 1 insignificant -0.152559 0.0303050 weaklyHypometh 1 insignificant chr3 159271519 159272519 41031 ENSG00000208653 0.77957 427 11 0.638965 189 11 0.65055 181 11 0.81478 267 11 0.77477 121 11 0.62591 381 11 0.63796 146 9 0.75207 173 10 0.713230 144 9 0.75781 141 11 0.68520 358 11 0.73743 87 8 0.801012 156 11 0.56667 34 2 0.684266 183 11 0.723043 106 11 0.695968 112 8 0.78048 187 11 0.73183 208 11 0.76982 280 11 0.64073 73 5 0.87008 85 7 0.78933 204 11 0.65893 64 5 0.69081 98 10 0.70940 221 11 0.88056 93 7 0.686700 69 7 0.84731 143 7 0.74926 213 11 0.67545 161 10 0.71989 425 12 0.71383 132 8 0.57243 116 11 0.72143 193 11 0.75246 78 8 0.55867 84 5 0.69832 231 11 0.72352 334 11 0.72125 362 11 0.76093 269 11 0.80937 269 11 0.81925 311 11 0.82135 0.73030 0.68480 0.84924 0.78867 0.72866 0.73432 0.83312 0.74266 0.80740 0.78791 0.77758 0.79767 0.77296 0.79785 0.79425 0.75792 0.81186 0.77989 0.78699 0.73005 0.86049 0.84483 0.77351 0.75714 0.77455 0.84579 0.75783 0.82150 0.79230 0.78485 0.76853 0.68489 0.727913 0.76312 0.74930 0.66833 0.76239 0.82773 0.81225 0.86886 0.84580 0.85999 5 0.75625 0.77988 -0.012114 11 0.66207 0.71135 -0.0492852 0.80972 0.007215 weaklyHypometh 1 1 insignificant 0.85011 0.0065863 weaklyHypometh 1 1 insignificant -0.0271359 0.352582 insignificant 1 insignificant 0.75638 0.72662 0.0467239 11 0.67219 0.67724 -0.0050496 0.0065511 8.5163e-01 weaklyHypermeth 0.43674 1.0000e+00 insignificant 0.017833 9.1193e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0465445 0.246628 insignificant 1 insignificant 0.75711 0.80841 -0.064145 11 0.74160 0.76181 -0.020211 0.98025 2.8901e-05 weaklyHypometh 1 0.028901 weaklyHypometh 0.99261 0.0001955 weaklyHypometh 1 0.1955 insignificant -0.050796 0.0783349 insignificant 1 insignificant 0.78115 0.72662 0.059496 11 0.75581 0.67724 0.078566 0.00472943 9.8413e-01 weaklyHypermeth 0.315295 1.000e+00 insignificant 0.01453937 9.9974e-01 weaklyHypermeth 1.00000 1.0000000 insignificant 0.0736805 0.105667 insignificant 1 insignificant 0.78182 0.80841 -0.050215 11 0.75626 0.76181 -0.0055497 0.98122 0.0086050 weaklyHypometh 1 1 insignificant 0.895670 0.111182 insignificant 1 1 insignificant -0.023661 0.47086 insignificant 1 insignificant 0.72639 0.80841 -0.110321 11 0.66686 0.76181 -0.094948 0.9999998 3.0124e-05 weaklyHypometh 1 0.013619 weaklyHypometh 0.999998 0.00077848 weaklyHypometh 1 0.38924 insignificant -0.097341 0.039038 weaklyHypometh 1 insignificant chr3 162729525 162730525 41242 ENSG00000182447 0.91835 238 7 0.751435 73 4 0.89573 100 6 0.86076 93 7 0.83837 52 6 0.81473 156 6 0.87262 53 4 0.85502 46 3 0.590959 49 2 0.90025 38 3 0.83781 135 7 0.87518 45 5 0.727106 35 3 NA 0 0 0.758772 53 2 0.827087 49 5 0.704221 49 6 0.83486 98 6 0.93452 56 5 0.83756 145 6 0.80556 17 0 0.76786 22 2 0.87768 121 7 0.95556 34 5 0.91667 21 0 0.74490 90 6 0.84286 24 3 0.958333 25 2 0.96065 27 2 0.86520 58 4 0.80388 78 5 0.90787 188 6 0.81091 67 4 0.73798 45 5 0.89605 136 6 0.73935 41 4 0.83081 37 3 0.85871 64 4 0.92269 179 7 0.92853 199 7 0.85051 135 7 0.88619 224 7 0.94030 167 7 0.91163 0.69286 0.83026 0.79705 0.75894 0.82223 0.88259 0.86086 0.70692 0.90375 0.84597 0.87017 0.75950 NA 0.84955 0.84653 0.79698 0.86654 0.94606 0.85609 0.70536 0.78571 0.87886 0.92459 0.88834 0.84354 0.85755 0.92188 0.92522 0.85040 0.83327 0.88872 0.79190 0.585381 0.87673 0.74656 0.83009 0.85507 0.90576 0.94759 0.84197 0.87564 0.93711 2 0.85157 0.86099 -0.013249 5 0.85614 0.86192 -0.0057786 0.83072 0.094521 insignificant 1 1 insignificant 0.77718 0.0032843 weaklyHypometh 1 1 insignificant -0.0443365 0.139565 lowCoverage 1 lowCoverage 0.85157 0.81282 0.0351430 6 0.85614 0.83573 0.0204098 0.0207898 7.7106e-01 weaklyHypermeth 0.98999 1.0000e+00 insignificant 0.057952 6.1562e-01 insignificant 1 1.0000e+00 insignificant 0.0106123 0.749615 lowCoverage 1 lowCoverage 0.85157 0.92035 -0.056123 6 0.85614 0.91190 -0.055762 0.99376 1.1752e-02 weaklyHypometh 1 1.000000 insignificant 0.98297 0.0257787 weaklyHypometh 1 1.0000 insignificant -0.082731 0.0049845 lowCoverage 1 lowCoverage 0.86099 0.81282 0.048609 5 0.86192 0.83573 0.026188 0.00011358 8.0146e-01 weaklyHypermeth 0.016226 1.000e+00 weaklyHypermeth 0.00042315 7.7688e-01 weaklyHypermeth 0.08463 1.0000000 weaklyHypermeth 0.0549487 0.131657 lowCoverage 1 lowCoverage 0.86099 0.92035 -0.044391 5 0.86192 0.91190 -0.0499832 0.72135 0.0331390 weaklyHypometh 1 1 insignificant 0.059211 0.241095 insignificant 1 1 insignificant -0.038394 0.18052 lowCoverage 1 lowCoverage 0.81282 0.92035 -0.091392 6 0.83573 0.91190 -0.076172 0.9984581 1.2866e-03 weaklyHypometh 1 0.257318 insignificant 0.996888 0.00231771 weaklyHypometh 1 0.57943 insignificant -0.093343 0.015965 lowCoverage 1 lowCoverage chr3 170348870 170349870 41625 MECOM ENSG00000085276 0.12000 49 5 0.036232 209 5 0.12414 78 5 0.14286 31 2 0.12361 103 5 0.15785 228 5 0.15127 148 5 0.15714 122 5 0.096296 74 5 0.14914 67 5 0.11028 166 5 0.10400 80 5 0.081818 44 5 0.00000 47 4 0.066667 106 5 0.063636 65 5 0.097701 145 2 0.24653 22 2 0.18750 15 1 0.21652 137 5 0.28750 52 5 0.13889 52 5 0.12308 45 5 0.11591 108 5 0.17143 15 1 0.15414 229 5 0.00000 107 4 0.088889 43 5 0.29412 18 1 0.12857 210 5 0.13429 181 5 0.17201 255 5 0.19905 105 5 0.60000 15 1 0.50000 28 1 0.16667 4 0 0.30313 143 5 0.23484 132 5 0.15395 135 5 0.18256 84 5 0.37500 24 2 0.33333 7 1 0.16104 63 5 0.35000 0.10246 0.36207 0.41667 0.32967 0.40996 0.41196 0.37632 0.28086 0.36207 0.21033 0.30333 0.23864 0.00000 0.19444 0.18561 0.34195 0.55054 0.44038 0.46218 0.35000 0.48611 0.35897 0.37500 0.50000 0.43087 0.00000 0.25926 0.34357 0.37500 0.33611 0.42061 0.30542 0.055556 0.38579 0.21912 0.40499 0.38328 0.39713 0.47835 0.43892 0.39031 0.41667 0 0.13430 0.10494 -0.010808 5 0.16194 0.15860 0.0033415 0.74483 0.584636 insignificant 1 1 insignificant 0.88004 0.4158964 insignificant 1 1 insignificant -0.0290760 0.285767 lowCoverage 1 lowCoverage 0.13399 0.25527 -0.1697282 5 0.12767 0.27016 -0.1424890 0.9029596 2.9264e-15 weaklyHypometh 1.00000 2.9264e-12 weaklyHypometh 0.742705 1.3017e-08 weaklyHypometh 1 1.3017e-05 weaklyHypometh -0.2122886 0.031205 lowCoverage 1 lowCoverage 0.13399 0.13099 -0.033466 5 0.12767 0.16627 -0.038599 0.87384 3.7741e-03 weaklyHypometh 1 1.000000 insignificant 0.95723 0.0098668 weaklyHypometh 1 1.0000 insignificant -0.119518 0.0611806 lowCoverage 1 lowCoverage 0.10450 0.25527 -0.162097 5 0.14032 0.27016 -0.129832 0.65579956 2.1970e-09 weaklyHypometh 1.000000 2.197e-06 weaklyHypometh 0.51787603 3.2648e-06 weaklyHypometh 1.00000 0.0032648 weaklyHypometh -0.1832126 0.051173 lowCoverage 1 lowCoverage 0.10450 0.13099 -0.024386 5 0.14032 0.16627 -0.0259417 0.86821 0.0043898 weaklyHypometh 1 1 insignificant 0.942793 0.055034 insignificant 1 1 insignificant -0.090442 0.13339 lowCoverage 1 lowCoverage 0.25527 0.13099 0.134150 5 0.27016 0.16627 0.103890 0.0056743 5.2308e-01 weaklyHypermeth 1 1.000000 insignificant 0.014859 0.31709184 weaklyHypermeth 1 1.00000 insignificant 0.092770 0.310352 lowCoverage 1 lowCoverage chr3 170682940 170683940 41782 ENSG00000206115 0.73451 379 10 0.592823 137 10 0.68109 128 10 0.76300 294 10 0.61119 91 9 0.68102 276 10 0.49138 105 10 0.58441 143 9 0.692568 96 9 0.73426 106 10 0.75663 372 10 0.59340 65 5 0.672768 88 7 0.46429 40 2 0.681469 131 10 0.415714 46 5 0.838384 44 4 0.69902 207 10 0.69710 146 10 0.73133 272 10 0.71111 52 2 0.70924 112 9 0.78868 148 10 0.67830 81 3 0.72786 83 9 0.70189 168 10 0.63580 139 8 0.339610 35 2 0.67379 108 7 0.59699 157 10 0.58358 167 10 0.74942 289 10 0.56426 102 9 0.67968 131 10 0.65455 61 5 0.74916 49 4 0.64245 84 10 0.66971 142 8 0.75110 371 10 0.61621 386 10 0.71713 385 10 0.77632 307 10 0.78956 253 10 0.74263 0.58654 0.61022 0.74005 0.57308 0.66660 0.62951 0.63050 0.60057 0.70121 0.72131 0.52701 0.63776 0.56260 0.61796 0.38787 0.82824 0.76790 0.55535 0.70032 0.64336 0.67598 0.82914 0.67419 0.72000 0.65149 0.62401 0.39109 0.64702 0.52517 0.46360 0.70231 0.61231 0.669353 0.79512 0.77634 0.74355 0.76180 0.73986 0.77903 0.72058 0.73572 0.78112 2 0.69700 0.65952 0.023325 10 0.70554 0.66201 0.0435228 0.49884 0.929468 insignificant 1 1 insignificant 0.75352 0.8566558 insignificant 1 1 insignificant -0.0022064 0.957840 insignificant 1 insignificant 0.69659 0.66432 0.0042229 9 0.61307 0.65045 -0.0373771 0.0157139 2.4720e-01 weaklyHypermeth 0.87299 1.0000e+00 insignificant 0.410474 2.2729e-01 insignificant 1 1.0000e+00 insignificant -0.0041509 0.904881 insignificant 1 insignificant 0.69700 0.82374 -0.075339 10 0.70554 0.67375 0.031782 0.99158 4.1948e-02 weaklyHypometh 1 1.000000 insignificant 0.98800 0.0557938 insignificant 1 1.0000 insignificant -0.074248 0.0888362 insignificant 1 insignificant 0.65863 0.66667 -0.012326 9 0.61002 0.66972 -0.059702 0.01140666 3.4068e-01 inconclusive 0.633703 1.000e+00 insignificant 0.08333776 1.7451e-01 insignificant 1.00000 1.0000000 insignificant -0.0019445 0.963295 insignificant 1 insignificant 0.65952 0.82374 -0.102459 10 0.66201 0.67375 -0.0117406 0.99906 0.0410869 weaklyHypometh 1 1 insignificant 0.995275 0.056096 insignificant 1 1 insignificant -0.072041 0.14026 insignificant 1 insignificant 0.66667 0.82353 -0.070405 9 0.66972 0.62356 0.046155 0.9863266 1.1482e-02 weaklyHypometh 1 1.000000 insignificant 0.985415 0.17519358 insignificant 1 1.00000 insignificant -0.070097 0.113749 insignificant 1 insignificant chr3 170749457 170750457 41807 ENSG00000213178 0.54845 83 5 0.626944 69 5 0.60000 34 4 0.63674 98 4 0.53333 36 4 0.66238 76 4 0.55238 60 5 0.65778 52 5 0.663333 26 4 0.83333 15 0 0.60096 95 5 0.74667 18 2 0.493182 34 3 0.74444 30 3 0.650000 41 4 0.400000 10 0 0.756410 17 1 0.62217 72 4 0.56786 48 4 0.69513 39 4 0.50000 9 0 1.00000 2 0 0.70080 52 5 0.75167 28 4 0.76992 55 4 0.77157 68 4 0.73333 15 1 0.733333 13 0 0.68810 57 5 0.73810 62 4 0.59455 92 4 0.63310 51 5 0.53450 59 4 0.67273 49 4 0.47769 81 4 0.66667 9 0 0.42622 56 5 0.56765 68 4 0.73571 67 3 0.67786 128 5 0.66471 96 4 0.60197 54 3 0.66341 89 5 0.57307 0.62694 0.62951 0.65954 0.53552 0.67408 0.55738 0.66940 0.67486 0.82240 0.60360 0.73989 0.53335 0.75410 0.66530 0.42623 0.71703 0.64244 0.57099 0.72030 0.50820 0.83944 0.72251 0.76571 0.76396 0.77624 0.72678 0.75410 0.69340 0.72849 0.60816 0.66343 0.55800 0.675733 0.51432 0.70755 0.41893 0.59957 0.74239 0.68214 0.66924 0.67623 0.67421 0 0.64743 0.70635 -0.047897 4 0.62693 0.67789 -0.0509655 0.94040 0.013638 lowCoverage 1 1 lowCoverage 0.99000 0.0207652 lowCoverage 1 1 lowCoverage -0.0882973 0.044742 lowCoverage 1 lowCoverage 0.64743 0.60248 0.0612728 4 0.62693 0.53970 0.0872259 0.0148127 9.7993e-01 lowCoverage 0.87134 1.0000e+00 lowCoverage 0.066697 9.3996e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0719987 0.157691 lowCoverage 1 lowCoverage 0.64743 0.67972 -0.030294 5 0.62693 0.66379 -0.036864 0.92346 1.2735e-01 insignificant 1 1.000000 insignificant 0.95474 0.1710411 insignificant 1 1.0000 insignificant -0.039157 0.2258717 lowCoverage 1 lowCoverage 0.70635 0.60248 0.112021 4 0.67789 0.53970 0.138191 0.00069358 9.9935e-01 lowCoverage 0.057799 1.000e+00 lowCoverage 0.01061926 9.9898e-01 lowCoverage 0.96539 1.0000000 lowCoverage 0.1602960 0.010950 lowCoverage 1 lowCoverage 0.70635 0.67972 0.015390 4 0.67789 0.66379 0.0141020 0.32282 0.4153798 lowCoverage 1 1 lowCoverage 0.471263 0.711091 lowCoverage 1 1 lowCoverage 0.049141 0.24544 lowCoverage 1 lowCoverage 0.60248 0.67972 -0.097488 4 0.53970 0.66379 -0.124089 0.9897646 4.2775e-03 lowCoverage 1 0.534685 lowCoverage 0.970724 0.00555946 lowCoverage 1 0.79421 lowCoverage -0.111155 0.043802 lowCoverage 1 lowCoverage chr3 177180578 177181578 42260 ENSG00000201452 0.876515 100 5 0.615824 72 5 0.68000 60 5 0.80356 111 5 0.76222 50 5 0.68688 186 5 0.43086 38 5 0.78554 69 5 0.64448 46 5 0.852381 55 5 0.784920 163 5 0.45000 23 4 0.779898 78 5 0.764286 36 5 0.79699 59 5 0.535714 30 4 0.75000 12 0 0.84669 101 5 0.54821 95 5 0.886280 135 5 0.834499 38 2 0.72099 48 5 0.80908 63 5 0.83000 29 1 0.91667 24 2 0.59722 97 5 0.898333 70 4 0.591111 17 2 0.668477 66 5 0.772319 89 5 0.851290 90 5 0.906638 187 5 0.67044 78 5 0.80056 57 5 0.79018 79 5 1.00000 10 0 0.84563 61 5 0.67710 95 5 0.771212 70 5 0.85513 98 5 0.66101 78 5 0.86287 77 5 0.866667 88 5 0.85152 0.616490 0.68649 0.787362 0.767768 0.82365 0.68769 0.79033 0.83807 0.860575 0.781912 0.54505 0.775263 0.74903 0.75594 0.633205 0.72973 0.853373 0.66847 0.858460 0.882442 0.68338 0.80633 0.855856 0.90991 0.70262 0.875676 0.655380 0.79556 0.780815 0.802666 0.839119 0.79146 0.77736 0.77743 1.00000 0.81060 0.68149 0.77887 0.833401 0.78311 0.86895 0.866366 1 0.78670 0.81181 -2.0261e-02 5 0.64463 0.77472 -0.1300937 0.97509 0.0802315 insignificant 1 1.00000 insignificant 0.996161 0.0211383 weaklyHypometh 1 1.00000 insignificant -0.0689888 0.1375945 lowCoverage 1 lowCoverage 0.78846 0.78684 0.0056812 5 0.70028 0.71239 -0.012115 5.2714e-01 6.0097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1543e-01 1.7061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.083257 1.8652e-01 lowCoverage 1.0000000 lowCoverage 0.78846 0.82725 -0.0445169 5 0.70028 0.771826 -0.07154775 9.8299e-01 0.06030458 insignificant 1.0000e+00 1.000000 insignificant 9.9738e-01 0.02678866 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0893145 1.0664e-01 lowCoverage 1.000000 lowCoverage 0.81172 0.78684 0.024119 5 0.77320 0.71239 0.060804 1.7132e-01 7.7442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0006e-01 8.0370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.014268 8.1621e-01 lowCoverage 1.0000000 lowCoverage 0.81172 0.82725 -0.0295229 5 0.77320 0.771826 0.0013706 8.2330e-01 0.395433 insignificant 1.0000e+00 1 insignificant 7.0182e-01 0.4006760 insignificant 1.00000000 1 insignificant -0.020326 7.0276e-01 lowCoverage 1.000000 lowCoverage 0.78684 0.82725 -0.054615 5 0.71239 0.771826 -0.059433 9.2416e-01 3.5097e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.5063e-01 3.6560e-01 insignificant 1.000000 1.00000000 insignificant -0.0060578 9.2622e-01 lowCoverage 1.000000 lowCoverage chr3 178792857 178793857 42363 ENSG00000203635 0.910784 91 3 0.899885 118 3 0.89961 84 6 0.98148 23 2 0.88539 80 6 0.96307 94 6 0.84844 131 6 0.90249 97 6 0.86167 100 6 0.949811 101 5 0.869060 167 6 0.90588 43 3 0.963871 96 6 0.875000 14 0 0.95326 91 6 0.880682 35 3 0.94919 147 6 0.71768 56 2 0.92630 72 3 0.967548 119 3 0.860073 65 5 0.98718 30 2 0.97573 88 3 0.73934 44 6 0.87500 5 0 0.96101 172 6 0.886905 74 5 0.666667 35 3 0.936299 62 3 0.966959 145 6 0.903669 140 6 0.837410 177 5 0.45718 198 6 0.39921 94 6 0.81429 116 2 0.10172 35 2 0.55093 60 5 0.43522 165 6 0.955556 120 6 0.95722 80 3 1.00000 22 2 0.93689 60 3 0.948718 40 4 0.89864 0.821755 0.87915 0.952675 0.892933 0.94884 0.88806 0.93771 0.80686 0.906856 0.862583 0.89730 0.939152 0.76302 0.89379 0.925400 0.92887 0.788538 0.92909 0.954751 0.880064 0.96724 0.94695 0.818392 0.76692 0.96745 0.893298 0.907407 0.86256 0.957927 0.890625 0.882064 0.35568 0.26287 0.51713 0.25197 0.33899 0.24118 0.92009 0.931373 0.98942 0.89106 0.868946 2 0.89255 0.90839 -1.6539e-02 6 0.90772 0.89463 0.0130946 0.33896 0.1183936 insignificant 1 1.00000 insignificant 0.388263 0.1712201 insignificant 1 1.00000 insignificant 0.0225356 0.4817326 lowCoverage 1 lowCoverage 0.89255 0.32934 0.5464174 6 0.90772 0.48788 0.419843 3.0593e-35 1.0000e+00 hypermethylated 1.5296e-32 1.0000e+00 hypermethylated 1.7367e-09 1.0000e+00 hypermethylated 3.4734e-07 1.0000e+00 hypermethylated 0.445800 4.9004e-03 lowCoverage 0.2722460 lowCoverage 0.89255 0.91589 -0.0231986 3 0.90772 0.950994 -0.04327025 9.9526e-01 0.01969466 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9112e-01 0.03086477 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0541214 5.4497e-03 lowCoverage 0.634579 lowCoverage 0.90839 0.32934 0.572371 6 0.89463 0.48788 0.406748 7.9168e-24 9.9999e-01 hypermethylated 2.6389e-21 1.0000e+00 hypermethylated 1.6907e-07 9.9998e-01 hypermethylated 2.8179e-05 1.0000e+00 hypermethylated 0.423264 5.2418e-03 lowCoverage 0.2620886 lowCoverage 0.90839 0.91589 -0.0074639 3 0.89463 0.950994 -0.0563649 6.7272e-01 0.055119 lowCoverage 1.0000e+00 1 lowCoverage 8.3120e-01 0.0180019 lowCoverage 1.00000000 1 lowCoverage -0.076657 2.4398e-02 lowCoverage 1.000000 lowCoverage 0.32934 0.91589 -0.573597 3 0.48788 0.950994 -0.463113 1.0000e+00 2.3189e-15 lowCoverage 1.0000e+00 2.3189e-12 lowCoverage 1.0000e+00 3.3114e-07 lowCoverage 1.000000 0.00033114 lowCoverage -0.4999213 3.0324e-03 lowCoverage 0.393804 lowCoverage chr3 183373060 183374060 42755 ENSG00000213155 0.749451 61 4 0.743360 380 5 0.72349 79 5 0.73778 53 4 0.77170 71 4 0.76352 139 5 0.76684 115 4 0.80634 99 5 0.62413 76 4 0.696058 52 4 0.744632 319 5 0.61806 46 4 0.735830 52 4 0.780303 29 3 0.74148 65 4 0.620000 57 4 0.38542 24 2 0.65598 39 3 0.79419 58 4 0.845287 137 4 0.613782 37 3 0.50000 13 1 0.87407 88 4 0.74134 42 4 0.62500 13 0 0.66930 348 5 0.702918 100 4 0.626455 29 4 0.716791 74 4 0.852619 339 5 0.820012 308 5 0.806710 186 5 0.46501 150 5 0.43131 57 3 0.36928 163 4 0.50000 4 0 0.37662 174 5 0.88371 262 5 0.852595 204 4 0.82060 139 5 0.86578 76 3 1.00000 18 3 0.820833 78 4 0.65733 0.602064 0.67042 0.665751 0.625572 0.66869 0.66834 0.69511 0.60248 0.653640 0.685622 0.60073 0.692219 0.72593 0.72858 0.725275 0.31593 0.686813 0.80259 0.783281 0.543815 0.59341 0.77692 0.652419 0.73626 0.75999 0.503925 0.690215 0.73043 0.784832 0.822637 0.773099 0.43222 0.52214 0.32752 0.50584 0.27903 0.89447 0.83067 0.774500 0.84088 1.00000 0.717582 2 0.67863 0.75143 -7.8393e-02 4 0.74928 0.78234 -0.0330571 0.62316 0.0026662 lowCoverage 1 0.66656 lowCoverage 0.469590 0.1163382 lowCoverage 1 1.00000 lowCoverage 0.0027751 0.9444151 lowCoverage 1 lowCoverage 0.67863 0.57654 0.1013750 4 0.74928 0.60168 0.147600 4.0475e-05 9.9939e-01 lowCoverage 2.2486e-03 1.0000e+00 lowCoverage 8.1234e-04 9.9834e-01 lowCoverage 5.0771e-02 1.0000e+00 lowCoverage 0.210870 4.2848e-02 lowCoverage 1.0000000 lowCoverage 0.67863 0.79612 -0.1285654 3 0.74928 0.864039 -0.11475500 9.9677e-01 0.00004227 lowCoverage 1.0000e+00 0.021135 lowCoverage 9.8266e-01 0.00023906 lowCoverage 1.0000e+00 0.11953 lowCoverage -0.1567699 4.3501e-03 lowCoverage 0.634579 lowCoverage 0.75143 0.57654 0.181265 5 0.78234 0.60168 0.180657 1.5544e-03 9.9991e-01 weaklyHypermeth 6.7583e-02 1.0000e+00 weaklyHypermeth 1.2541e-02 9.9684e-01 weaklyHypermeth 5.0163e-01 1.0000e+00 insignificant 0.208094 4.5504e-02 lowCoverage 1.0000000 lowCoverage 0.75143 0.79612 -0.0385166 4 0.78234 0.864039 -0.0816979 8.6696e-01 0.044494 lowCoverage 1.0000e+00 1 lowCoverage 8.2124e-01 0.0091693 lowCoverage 1.00000000 1 lowCoverage -0.159545 5.2394e-03 lowCoverage 0.844296 lowCoverage 0.57654 0.79612 -0.221173 4 0.60168 0.864039 -0.262355 9.9977e-01 1.2478e-03 lowCoverage 1.0000e+00 8.9128e-02 lowCoverage 9.9998e-01 1.4212e-03 lowCoverage 1.000000 0.20303347 lowCoverage -0.3676394 3.9390e-03 lowCoverage 0.393804 lowCoverage chr3 185538440 185539440 42885 ENSG00000214156 0.092125 962 23 0.063466 632 23 0.32002 490 21 0.09810 983 23 0.11768 351 20 0.23308 1110 23 0.10835 624 20 0.15924 467 20 0.10562 658 20 0.049646 652 23 0.091157 846 23 0.16007 514 23 0.080687 681 20 0.013889 49 3 0.24500 522 20 0.069918 551 23 0.11732 452 18 0.10731 1403 23 0.10635 507 23 0.080423 1059 23 0.093428 278 16 0.25613 586 20 0.11671 715 23 0.02572 423 23 0.22685 627 23 0.28185 867 23 0.033182 523 20 0.020179 221 20 0.056359 500 23 0.061107 931 23 0.047216 861 23 0.053936 1381 23 0.27343 431 20 0.30920 448 21 0.20813 412 13 0.22043 674 22 0.20384 199 17 0.40448 799 23 0.056346 1137 23 0.11219 1165 23 0.16440 1122 23 0.12381 1497 23 0.034314 1339 23 0.08032 0.042936 0.23334 0.092116 0.083242 0.15465 0.06245 0.10756 0.10647 0.038445 0.068943 0.12409 0.028619 NA 0.18606 0.048642 0.10356 0.044332 0.08557 0.079594 0.073352 0.13405 0.11332 0.025364 0.18723 0.27136 0.029452 0.026390 0.04563 0.050102 0.029848 0.047475 0.23991 0.26346 0.12293 0.18218 0.19751 0.33616 0.05325 0.095666 0.15785 0.10160 0.030573 20 0.10134 0.10072 -3.9439e-05 23 0.10310 0.10196 0.0011320 0.77829 0.9289693 insignificant 1 1.00000 insignificant 0.012244 0.9999980 inconclusive 1 1.00000 insignificant 0.0149174 0.6433259 insignificant 1 insignificant 0.10161 0.29632 -0.1915066 23 0.13897 0.32045 -0.181478 9.8595e-01 1.4871e-37 weaklyHypometh 1.0000e+00 1.4871e-34 weaklyHypometh 8.0328e-01 4.4719e-09 weaklyHypometh 1.0000e+00 4.4719e-06 weaklyHypometh -0.148947 3.2797e-03 weaklyHypometh 0.2342617 insignificant 0.10135 0.10304 0.0047025 23 0.10758 0.099287 0.00829108 5.0727e-01 0.76789774 insignificant 1.0000e+00 1.000000 insignificant 6.1720e-01 0.53278721 insignificant 1.0000e+00 1.00000 insignificant 0.0227614 4.4749e-01 insignificant 1.000000 insignificant 0.10072 0.29608 -0.180298 23 0.10196 0.29214 -0.190171 9.9976e-01 1.2977e-20 weaklyHypometh 1.0000e+00 1.2977e-17 weaklyHypometh 9.9872e-01 5.1689e-08 weaklyHypometh 1.0000e+00 5.1689e-05 weaklyHypometh -0.163864 2.0297e-03 weaklyHypometh 0.1377745 insignificant 0.10077 0.10304 0.0071948 23 0.10640 0.099287 0.0071098 7.6807e-01 0.872634 insignificant 1.0000e+00 1 insignificant 9.9966e-01 0.0332107 inconclusive 1.00000000 1 insignificant 0.007844 8.3087e-01 insignificant 1.000000 insignificant 0.29618 0.10304 0.196007 23 0.30484 0.099287 0.205549 3.8169e-13 9.9139e-01 weaklyHypermeth 3.8169e-10 1.0000e+00 weaklyHypermeth 4.9414e-05 7.0659e-01 weaklyHypermeth 0.049414 1.00000000 weaklyHypermeth 0.1717083 2.0185e-03 weaklyHypermeth 0.384286 insignificant chr3 185859522 185860522 42911 EPHB3 ENSG00000182580 0.595968 213 6 0.523708 336 6 0.65364 226 6 0.58125 236 6 0.53052 131 6 0.67021 375 6 0.59415 184 6 0.62353 237 6 0.61396 288 6 0.695425 242 6 0.627668 305 6 0.56520 120 5 0.496219 272 6 0.655523 179 6 0.55370 353 6 0.800207 83 5 0.19706 51 3 0.46732 282 6 0.47710 320 6 0.564156 283 6 0.894991 107 5 0.56875 186 7 0.65239 236 6 0.81166 132 6 0.43844 105 5 0.62159 395 6 0.583310 184 6 0.709397 155 6 0.718395 380 6 0.628238 510 6 0.640094 374 6 0.848704 351 6 0.21830 265 6 0.43483 160 6 0.75000 48 4 0.34722 12 0 0.42440 236 7 0.18146 478 6 0.474686 257 6 0.48629 235 6 0.64715 178 6 0.46462 179 6 0.557437 174 6 0.67166 0.587425 0.70436 0.757382 0.681424 0.72802 0.77087 0.66431 0.65773 0.751730 0.777542 0.61626 0.473454 0.72429 0.53375 0.786079 0.51325 0.549947 0.56392 0.657756 0.869343 0.54114 0.83541 0.825346 0.51882 0.63755 0.679693 0.764797 0.72910 0.639029 0.631729 0.858516 0.27271 0.40288 0.73280 0.41924 0.53733 0.25370 0.61195 0.519558 0.65533 0.52943 0.590479 5 0.62023 0.67416 -4.3000e-02 6 0.56460 0.66890 -0.1042993 0.99768 0.0017469 weaklyHypometh 1 0.66656 insignificant 0.999722 0.0019022 weaklyHypometh 1 0.79498 insignificant -0.1020040 0.0364326 weaklyHypometh 1 insignificant 0.62023 0.34612 0.2980318 6 0.56460 0.30933 0.255265 2.1637e-16 9.9998e-01 hypermethylated 2.7047e-14 1.0000e+00 hypermethylated 2.0017e-06 9.9936e-01 hypermethylated 2.5021e-04 1.0000e+00 hypermethylated 0.181623 8.2315e-02 lowCoverage 1.0000000 lowCoverage 0.62023 0.55718 0.0807961 6 0.56460 0.460568 0.10402902 1.2946e-02 0.85779584 weaklyHypermeth 7.6155e-01 1.000000 insignificant 2.3293e-02 0.75004297 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0482890 2.9423e-01 insignificant 1.000000 insignificant 0.67416 0.34612 0.332302 6 0.66890 0.30933 0.359564 2.6371e-15 1.0000e+00 hypermethylated 3.7673e-13 1.0000e+00 hypermethylated 1.5264e-07 1.0000e+00 hypermethylated 2.8179e-05 1.0000e+00 hypermethylated 0.283627 1.6794e-02 lowCoverage 0.7301698 lowCoverage 0.67416 0.55718 0.1256308 6 0.66890 0.460568 0.2083283 3.5680e-04 0.998998 weaklyHypermeth 4.4600e-02 1 weaklyHypermeth 1.3776e-03 0.9995739 weaklyHypermeth 0.27552644 1 insignificant 0.150293 1.1256e-02 weaklyHypermeth 1.000000 insignificant 0.34612 0.55718 -0.216740 6 0.30933 0.460568 -0.151236 9.9880e-01 3.3688e-07 hypomethylated 1.0000e+00 5.6147e-05 hypomethylated 9.9716e-01 7.7954e-04 hypomethylated 1.000000 0.12992269 insignificant -0.1333345 1.8449e-01 lowCoverage 1.000000 lowCoverage chr3 185859897 185860897 42912 EPHB3 ENSG00000182580 0.575268 289 8 0.527914 421 8 0.66836 306 8 0.56179 283 8 0.55806 203 8 0.70484 458 8 0.56906 257 8 0.59289 327 8 0.60985 342 8 0.642892 310 8 0.654213 400 8 0.55812 150 7 0.465894 355 8 0.621767 246 8 0.52958 420 8 0.800161 113 7 0.19706 51 3 0.47850 340 8 0.46524 516 8 0.514361 354 8 0.767137 145 7 0.50903 246 9 0.63647 288 8 0.77391 175 8 0.48792 127 7 0.60152 555 8 0.584978 292 8 0.651593 202 8 0.699149 586 8 0.596907 688 8 0.632917 542 8 0.805782 441 8 0.36439 341 8 0.49770 284 8 0.83208 319 6 0.44792 23 2 0.55601 288 9 0.32955 668 8 0.467820 321 8 0.49686 305 8 0.61870 208 8 0.52049 208 8 0.545919 216 8 0.63003 0.575659 0.70650 0.688103 0.674335 0.74922 0.69478 0.62140 0.64192 0.681738 0.769550 0.59448 0.443586 0.67076 0.51048 0.789736 0.52329 0.539983 0.52865 0.574303 0.825702 0.47779 0.76851 0.752388 0.54970 0.60962 0.656345 0.689504 0.70354 0.599156 0.625442 0.805199 0.41192 0.48560 0.80201 0.50613 0.60494 0.40978 0.56778 0.521926 0.62328 0.57111 0.569695 7 0.60137 0.64387 -3.8761e-02 8 0.55900 0.64566 -0.0866623 0.99894 0.0025613 weaklyHypometh 1 0.66656 insignificant 0.999869 0.0025828 weaklyHypometh 1 0.79498 insignificant -0.0808182 0.0511058 insignificant 1 insignificant 0.60137 0.54370 0.1258347 8 0.55900 0.43419 0.124814 1.1517e-14 1.3558e-03 weaklyHypermeth 1.1517e-12 3.3896e-01 weaklyHypermeth 2.7270e-05 7.1473e-02 weaklyHypermeth 2.4791e-03 1.0000e+00 weaklyHypermeth 0.060184 4.7090e-01 insignificant 1.0000000 insignificant 0.60137 0.55008 0.0689114 8 0.55900 0.474323 0.08467696 2.0535e-02 0.84652296 weaklyHypermeth 1.0000e+00 1.000000 insignificant 3.7693e-02 0.75863361 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0348334 3.6411e-01 insignificant 1.000000 insignificant 0.64381 0.54394 0.121976 8 0.63110 0.49077 0.140329 5.2007e-13 3.8645e-03 weaklyHypermeth 6.5009e-11 9.6611e-01 weaklyHypermeth 8.4056e-06 2.9407e-01 weaklyHypermeth 9.3396e-04 1.0000e+00 weaklyHypermeth 0.141002 1.2134e-01 insignificant 1.0000000 insignificant 0.64387 0.55008 0.1099081 8 0.64566 0.474323 0.1713392 4.8417e-04 0.995773 weaklyHypermeth 4.8417e-02 1 weaklyHypermeth 2.4548e-03 0.9985435 weaklyHypermeth 0.35068543 1 insignificant 0.115652 1.0562e-02 weaklyHypermeth 1.000000 insignificant 0.54370 0.55008 -0.096644 8 0.43419 0.474323 -0.040137 6.0053e-02 5.2848e-06 weaklyHypometh 1.0000e+00 6.6060e-04 weaklyHypometh 4.1044e-01 5.3445e-03 weaklyHypometh 1.000000 0.41111354 insignificant -0.0253501 7.5636e-01 insignificant 1.000000 insignificant chr3 185863457 185864457 42913 EPHB3 ENSG00000182580 0.876065 171 7 0.903458 102 5 0.84133 71 5 0.95036 190 6 0.98571 45 3 0.90030 262 7 0.92400 64 5 0.91429 57 4 0.91664 68 4 0.873333 43 4 0.923670 186 5 0.98462 29 2 0.926013 54 5 0.888889 18 2 0.83745 75 4 0.619048 16 2 0.84476 46 2 0.69540 93 4 0.95795 61 5 0.908403 175 5 0.920000 46 4 0.79412 52 4 0.90225 79 6 0.94870 102 5 1.00000 24 3 0.89846 238 7 0.813318 92 4 0.834991 49 4 0.812569 56 5 0.937211 231 7 0.940873 204 7 0.961853 262 7 0.47708 139 5 0.33714 70 5 0.37301 314 6 0.26340 49 4 0.59811 124 5 0.31585 291 7 0.905750 218 7 0.86826 191 7 0.80239 149 6 0.95833 93 3 0.852868 217 7 0.84687 0.881299 0.88551 0.909008 0.984652 0.88661 0.87306 0.90083 0.91074 0.949587 0.914107 0.97711 0.942278 0.87524 0.83526 0.919803 0.87412 0.855228 0.93719 0.854391 0.880992 0.81211 0.90840 0.972543 0.99882 0.80642 0.823068 0.845169 0.78109 0.884716 0.939177 0.959592 0.46174 0.31932 0.45581 0.40283 0.64148 0.12883 0.89504 0.883896 0.90196 0.91720 0.847712 3 0.89485 0.91556 -8.9879e-03 5 0.90949 0.92416 -0.0146721 0.80070 0.3273877 insignificant 1 1.00000 insignificant 0.661624 0.6947178 insignificant 1 1.00000 insignificant -0.0134452 0.6327802 lowCoverage 1 lowCoverage 0.89485 0.35765 0.4989513 5 0.90949 0.39745 0.512039 1.7181e-36 1.0000e+00 hypermethylated 1.7181e-33 1.0000e+00 hypermethylated 2.8616e-10 1.0000e+00 hypermethylated 1.4308e-07 1.0000e+00 hypermethylated 0.489486 5.4993e-05 lowCoverage 0.0068741 lowCoverage 0.89485 0.88005 0.0144538 5 0.90949 0.883610 0.02587743 1.0809e-02 0.62200817 weaklyHypermeth 6.7555e-01 1.000000 insignificant 2.9473e-01 0.88410100 insignificant 1.0000e+00 1.00000 insignificant 0.0060618 8.5748e-01 lowCoverage 1.000000 lowCoverage 0.91556 0.35765 0.557727 7 0.92416 0.39745 0.526711 9.1517e-26 1.0000e+00 hypermethylated 4.5758e-23 1.0000e+00 hypermethylated 5.4954e-09 1.0000e+00 hypermethylated 1.8318e-06 1.0000e+00 hypermethylated 0.502931 4.9847e-05 hypermethylated 0.0083079 hypermethylated 0.91568 0.88018 0.0398827 7 0.93364 0.898159 0.0354808 3.2574e-02 0.989263 weaklyHypermeth 1.0000e+00 1 insignificant 3.0576e-01 0.9833742 insignificant 1.00000000 1 insignificant 0.019507 5.6490e-01 insignificant 1.000000 insignificant 0.35765 0.88005 -0.472475 7 0.39745 0.883610 -0.486161 1.0000e+00 3.7283e-12 hypomethylated 1.0000e+00 1.2428e-09 hypomethylated 1.0000e+00 3.4051e-06 hypomethylated 1.000000 0.00113504 hypomethylated -0.4834237 4.2868e-05 hypomethylated 0.042868 hypomethylated chr3 185873153 185874153 42915 EPHB3 ENSG00000182580 0.828528 235 6 0.893976 113 6 0.73723 105 6 0.92192 273 6 0.72222 36 5 0.92180 323 6 0.67795 55 2 0.88931 98 6 0.74853 131 6 0.823279 130 6 0.939938 154 6 0.67870 38 4 0.932334 192 6 0.801573 107 5 0.91486 104 6 0.447253 36 4 0.73611 30 2 0.80949 291 6 0.91984 73 6 0.947134 191 6 0.928571 65 6 0.86249 144 6 0.64055 137 6 0.75193 108 5 0.90207 76 6 0.92018 164 6 0.771259 84 6 0.728228 82 6 0.783070 110 6 0.811004 221 6 0.929647 140 6 0.938321 237 6 0.33787 197 6 0.36007 95 6 0.24176 131 5 0.18135 37 3 0.60731 112 6 0.24239 169 6 0.822426 125 6 0.85265 152 6 0.90116 125 6 0.82182 152 4 0.869226 148 6 0.85033 0.896295 0.77704 0.908827 0.683495 0.91762 0.75079 0.90437 0.86898 0.937681 0.929171 0.73657 0.928909 0.95117 0.91603 0.510253 0.72694 0.765897 0.93178 0.939821 0.945215 0.83710 0.88220 0.751172 0.87219 0.90294 0.899561 0.856699 0.84270 0.939328 0.937531 0.933696 0.32200 0.38298 0.38021 0.23230 0.54962 0.26896 0.77449 0.810786 0.88413 0.80898 0.854273 4 0.86777 0.88202 -1.7608e-02 6 0.75437 0.74172 0.0126458 0.94260 0.2680210 insignificant 1 1.00000 insignificant 0.976312 0.1175710 insignificant 1 1.00000 insignificant -0.0160104 0.6901956 insignificant 1 insignificant 0.86905 0.38327 0.4812934 6 0.86214 0.40190 0.460239 6.4107e-29 1.0000e+00 hypermethylated 1.6027e-26 1.0000e+00 hypermethylated 1.1517e-09 1.0000e+00 hypermethylated 2.8793e-07 1.0000e+00 hypermethylated 0.486141 1.6508e-04 hypermethylated 0.0165076 hypermethylated 0.86905 0.83048 0.0423589 6 0.86214 0.862817 -0.00068006 2.2768e-02 0.56967888 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.9685e-01 0.43687312 insignificant 1.0000e+00 1.00000 insignificant -0.0388567 2.3535e-01 insignificant 1.000000 insignificant 0.88427 0.38327 0.501400 6 0.84768 0.40190 0.445787 1.3715e-21 1.0000e+00 hypermethylated 3.4289e-19 1.0000e+00 hypermethylated 2.3148e-10 1.0000e+00 hypermethylated 1.1574e-07 1.0000e+00 hypermethylated 0.502151 1.3994e-04 hypermethylated 0.0191407 hypermethylated 0.88427 0.83048 0.0507841 6 0.84768 0.862817 -0.0151324 2.0314e-02 0.871229 weaklyHypermeth 1.0000e+00 1 insignificant 7.2488e-02 0.9149697 insignificant 1.00000000 1 insignificant -0.022846 4.8406e-01 insignificant 1.000000 insignificant 0.38327 0.83048 -0.417380 6 0.40190 0.862817 -0.460919 1.0000e+00 1.8208e-11 hypomethylated 1.0000e+00 4.5519e-09 hypomethylated 1.0000e+00 8.8979e-07 hypomethylated 1.000000 0.00044489 hypomethylated -0.5249977 2.5292e-04 hypomethylated 0.126462 insignificant chr3 185971359 185972359 42931 MAGEF1 ENSG00000177383 0.896095 223 5 0.684870 601 5 0.74781 112 5 0.80953 282 5 0.64660 120 5 0.85667 340 5 0.77643 282 5 0.89022 194 5 0.77286 111 5 0.881569 57 5 0.880536 333 5 0.81905 74 5 0.211111 90 5 0.668831 50 5 0.74370 90 5 0.821667 64 5 NA 0 0 0.73754 92 5 0.68986 70 5 0.729286 212 5 0.934902 96 5 0.40000 5 0 0.81302 92 5 0.71845 45 5 0.93333 40 5 0.81685 412 5 0.861555 81 5 0.957576 70 5 0.763571 64 5 0.831215 451 5 0.501715 452 5 0.868534 210 5 0.21744 213 5 0.18552 163 5 0.57513 684 5 NA 0 0 0.50542 266 5 0.25336 369 5 0.348340 246 5 0.40782 250 5 0.24630 280 5 0.19469 113 1 0.425375 340 5 0.87230 0.649931 0.80494 0.797653 0.665786 0.84080 0.79856 0.87693 0.80512 0.896693 0.873845 0.78038 0.256219 0.69519 0.71918 0.809826 NA 0.672738 0.71339 0.766258 0.936494 0.29851 0.81671 0.647166 0.86567 0.81178 0.866832 0.956807 0.73657 0.835808 0.570633 0.871685 0.18985 0.15053 0.54600 NA 0.50653 0.20272 0.37395 0.381371 0.24724 NA 0.452495 5 0.77245 0.75917 1.3214e-02 5 0.77209 0.75790 0.0141907 0.51056 0.7741842 insignificant 1 1.00000 insignificant 0.991451 0.0308452 inconclusive 1 1.00000 insignificant -0.0326443 0.5959517 lowCoverage 1 lowCoverage 0.77245 0.41062 0.3791404 5 0.77209 0.40746 0.364631 2.5487e-18 9.9958e-01 hypermethylated 4.2478e-16 1.0000e+00 hypermethylated 9.0156e-09 1.0000e+00 hypermethylated 1.5026e-06 1.0000e+00 hypermethylated 0.403373 4.3271e-03 lowCoverage 0.2545378 lowCoverage 0.77245 0.34500 0.4259946 5 0.77209 0.347485 0.42460266 2.1978e-20 1.00000000 hypermethylated 2.1978e-17 1.000000 hypermethylated 5.8065e-10 1.00000000 hypermethylated 5.8065e-07 1.00000 hypermethylated 0.4262439 2.8490e-05 lowCoverage 0.014245 lowCoverage 0.75917 0.41062 0.351256 5 0.75790 0.40746 0.350440 1.6012e-12 9.9721e-01 hypermethylated 1.7791e-10 1.0000e+00 hypermethylated 2.0847e-06 1.0000e+00 hypermethylated 2.6059e-04 1.0000e+00 hypermethylated 0.436018 2.2044e-03 lowCoverage 0.1377745 lowCoverage 0.75917 0.34500 0.4104208 5 0.75790 0.347485 0.4104120 8.2484e-14 1.000000 hypermethylated 7.8371e-11 1 hypermethylated 2.2069e-07 1.0000000 hypermethylated 0.00011035 1 hypermethylated 0.458888 1.3011e-05 lowCoverage 0.013011 lowCoverage 0.41062 0.34500 0.052628 5 0.40746 0.347485 0.059972 2.9513e-01 4.6109e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7151e-01 2.9736e-01 insignificant 1.000000 1.00000000 insignificant 0.0228704 8.1166e-01 lowCoverage 1.000000 lowCoverage chr3 187234944 187235944 42973 ENSG00000171658 0.689531 216 6 0.579388 211 6 0.54928 154 6 0.61270 127 6 0.63205 156 6 0.67031 259 6 0.67112 151 6 0.67023 155 6 0.59150 126 6 0.624725 144 6 0.712666 306 6 0.56289 104 6 0.658071 227 6 0.591667 79 4 0.69972 176 6 0.610269 100 5 0.71064 370 6 0.65605 177 6 0.73021 184 6 0.685731 210 6 0.786991 95 6 0.72280 65 6 0.59259 137 5 0.77595 83 6 0.70912 86 6 0.71163 243 6 0.770052 78 4 0.778730 75 5 0.627287 146 6 0.686582 245 6 0.677462 241 6 0.711530 241 6 0.59046 208 6 0.58701 149 6 0.58271 173 6 0.67422 40 3 0.58398 122 6 0.63892 229 6 0.684049 164 6 0.72440 175 6 0.67752 174 6 0.63538 178 6 0.623511 173 5 0.70989 0.605631 0.56356 0.651564 0.624452 0.72158 0.68239 0.68871 0.64647 0.665236 0.724346 0.55336 0.704982 0.65373 0.72163 0.595666 0.76364 0.701261 0.75827 0.715289 0.810773 0.78882 0.66000 0.809832 0.73228 0.72567 0.764373 0.772218 0.66771 0.707957 0.697429 0.744419 0.65042 0.61430 0.62295 0.65111 0.63756 0.66180 0.73267 0.750443 0.72355 0.68899 0.655164 5 0.67263 0.72795 -3.2854e-02 6 0.66101 0.69997 -0.0389610 0.99661 0.0243970 weaklyHypometh 1 1.00000 insignificant 0.998729 0.0028182 weaklyHypometh 1 0.79498 insignificant -0.0671216 0.0047726 weaklyHypometh 1 insignificant 0.67263 0.64929 0.0400184 6 0.66101 0.61954 0.041469 1.5630e-02 9.8890e-01 weaklyHypermeth 5.0421e-01 1.0000e+00 insignificant 4.0900e-02 9.7959e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.035886 9.3293e-02 insignificant 1.0000000 insignificant 0.67263 0.63079 -0.0161804 6 0.66101 0.668264 -0.00725504 7.0432e-01 0.34122235 insignificant 1.0000e+00 1.000000 insignificant 7.6336e-01 0.10360021 insignificant 1.0000e+00 1.00000 insignificant -0.0235348 3.0970e-01 insignificant 1.000000 insignificant 0.72795 0.64929 0.073133 6 0.69997 0.61954 0.080430 3.7023e-06 9.9995e-01 weaklyHypermeth 2.3140e-04 1.0000e+00 weaklyHypermeth 8.6027e-05 9.9999e-01 weaklyHypermeth 6.6174e-03 1.0000e+00 weaklyHypermeth 0.103008 5.4763e-04 weaklyHypermeth 0.0580079 weaklyHypermeth 0.72795 0.63079 0.0164881 6 0.69997 0.668264 0.0317060 1.1774e-01 0.797045 insignificant 1.0000e+00 1 insignificant 1.8422e-01 0.8931845 insignificant 1.00000000 1 insignificant 0.043587 1.1146e-01 insignificant 1.000000 insignificant 0.64929 0.63079 -0.060192 6 0.61954 0.668264 -0.048724 9.7906e-01 7.1556e-04 weaklyHypometh 1.0000e+00 5.5043e-02 weaklyHypometh 9.9783e-01 2.7935e-03 weaklyHypometh 1.000000 0.31039138 insignificant -0.0594209 3.6363e-02 weaklyHypometh 1.000000 insignificant chr3 187583793 187584793 43009 DGKG ENSG00000058866 0.89731 295 5 0.80604 380 5 0.78697 189 5 0.83186 229 5 0.91435 217 5 0.84908 443 5 0.88144 231 5 0.85171 171 5 0.85814 135 3 0.83377 105 3 0.88439 405 5 0.89583 100 3 0.816220 129 3 0.86938 99 3 0.89456 174 3 0.92375 122 5 NA 0 0 0.73673 328 3 0.921421 507 5 0.758812 383 5 0.81103 83 5 0.60000 6 0 0.74873 273 5 0.93333 37 3 0.85556 39 1 0.88264 417 5 0.78568 257 3 0.96312 76 3 0.83864 319 5 0.89040 380 5 0.798718 357 5 0.87399 286 5 0.740084 313 5 0.868611 344 5 0.5418437 457 5 NA 0 0 0.6842674 222 5 0.800442 462 5 0.756221 434 5 0.83262 334 5 0.841968 337 3 0.42197 412 3 0.744372 247 5 0.82933 0.71156 0.78877 0.82829 0.86332 0.81575 0.84070 0.81199 0.78145 0.88153 0.84811 0.83038 0.724393 0.81378 0.80195 0.85240 NA 0.78290 0.85026 0.802117 0.88855 0.275304 0.83871 0.92353 0.77497 0.82644 0.79267 0.95171 0.84713 0.83690 0.743662 0.87555 0.679166 0.792671 0.5834089 NA 0.691483 0.722197 0.651356 0.74705 0.713161 0.61464 0.655937 3 0.82314 0.84025 -0.01563988 5 0.85727 0.86076 -0.0034928 7.5859e-01 0.3276188 insignificant 1.0000000 1 insignificant 0.69724319 0.4343246 insignificant 1.00000 1 insignificant 0.0214306 0.48851 lowCoverage 1 lowCoverage 0.82314 0.695773 0.13374745 5 0.85727 0.725202 0.1320669 4.4937e-08 9.9985e-01 weaklyHypermeth 1.3617e-06 1.0000e+00 weaklyHypermeth 2.1419e-05 9.9945e-01 weaklyHypermeth 1.0199e-03 1.0000e+00 weaklyHypermeth 0.126201 8.4686e-02 lowCoverage 1.0000e+00 lowCoverage 0.82314 0.708617 0.10328561 5 0.85727 0.773430 0.0838389 3.6057e-08 0.99558909 weaklyHypermeth 2.2265e-06 1.00000 weaklyHypermeth 1.8769e-04 0.9965025 weaklyHypermeth 1.1149e-02 1.0000 weaklyHypermeth 0.1338200 1.5736e-01 lowCoverage 1.0000000 lowCoverage 0.84025 0.695773 0.1484429 5 0.86076 0.725202 0.1355597 6.1994e-07 9.9988e-01 weaklyHypermeth 1.8234e-05 1.0000e+00 weaklyHypermeth 1.9604e-04 9.9964e-01 weaklyHypermeth 7.0013e-03 1.0000e+00 weaklyHypermeth 0.1047706 1.4147e-01 lowCoverage 1.0000e+00 lowCoverage 0.84025 0.708617 0.1183532 5 0.86076 0.773430 0.0873317 2.6432e-05 0.9982319 weaklyHypermeth 1.4685e-03 1 weaklyHypermeth 2.0785e-03 0.998895 weaklyHypermeth 9.8978e-02 1 weaklyHypermeth 0.1123895 2.2664e-01 lowCoverage 1.00000000 lowCoverage 0.695773 0.708617 -0.028673 5 0.725202 0.773430 -0.0482280 2.3879e-01 6.0748e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8968e-01 2.5174e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0076188 9.3816e-01 lowCoverage 1.0000000 lowCoverage chr3 187606860 187607860 43010 DGKG ENSG00000058866 0.86361 235 8 0.88626 360 8 0.82986 92 7 0.91896 217 8 0.91432 62 3 0.91754 361 8 0.89329 100 8 0.91644 81 6 0.76471 32 3 1.00000 16 1 0.89953 411 8 0.78175 22 2 0.776190 19 2 0.92102 40 3 0.87897 30 3 0.88333 12 0 1.00000 206 2 0.89193 145 6 0.953977 128 6 0.910789 182 8 0.73694 60 4 0.94602 41 4 0.89223 101 8 0.76299 108 7 0.76258 165 6 0.95951 342 8 0.75893 28 2 0.92857 26 2 0.84141 148 7 0.94748 332 8 0.945107 302 8 0.90620 311 8 0.651408 197 8 0.454982 135 6 0.6708344 342 7 0.607143 175 6 0.5388312 281 8 0.771668 272 8 0.926407 402 8 0.83800 309 8 0.886851 227 8 0.92745 110 3 0.917669 260 8 0.88510 0.85164 0.86715 0.92199 0.88070 0.91566 0.87955 0.95871 0.93412 1.00000 0.89652 0.82331 0.799221 0.85056 0.86720 0.81759 0.94194 0.85632 0.96770 0.901492 0.83326 0.895553 0.92097 0.87657 0.58821 0.96264 0.75439 0.95614 0.96181 0.95406 0.942992 0.91109 0.668038 0.542039 0.5730841 0.512872 0.658085 0.670363 0.952097 0.88120 0.933483 0.96182 0.929032 0 0.90076 0.92821 -0.02905991 8 0.83441 0.81367 0.0207351 9.9794e-01 0.0698897 insignificant 1.0000000 1 insignificant 0.96845574 0.4536319 insignificant 1.00000 1 insignificant 0.0244603 0.41044 insignificant 1 insignificant 0.90105 0.644080 0.27850916 8 0.90872 0.573102 0.3356155 7.8075e-17 1.0000e+00 hypermethylated 4.3375e-15 1.0000e+00 hypermethylated 3.7461e-10 1.0000e+00 hypermethylated 4.1624e-08 1.0000e+00 hypermethylated 0.274313 1.0969e-03 weaklyHypermeth 3.7823e-02 weaklyHypermeth 0.90091 0.880734 -0.00046753 8 0.89731 0.888912 0.0083955 1.9300e-01 0.43260520 insignificant 1.0000e+00 1.00000 insignificant 1.1639e-01 0.3971497 insignificant 1.0000e+00 1.0000 insignificant -0.0091511 6.8847e-01 insignificant 1.0000000 insignificant 0.92959 0.644080 0.2995081 8 0.93893 0.573102 0.3658282 1.2428e-12 1.0000e+00 hypermethylated 5.9182e-11 1.0000e+00 hypermethylated 2.7459e-07 1.0000e+00 hypermethylated 1.8306e-05 1.0000e+00 hypermethylated 0.2498529 1.1477e-03 weaklyHypermeth 4.4143e-02 weaklyHypermeth 0.92952 0.880734 0.0319442 8 0.93130 0.888912 0.0423848 3.4534e-02 0.9654867 weaklyHypermeth 9.2523e-01 1 insignificant 4.3751e-02 0.944237 weaklyHypermeth 1.0000e+00 1 insignificant -0.0336114 2.8731e-01 insignificant 1.00000000 insignificant 0.644540 0.880734 -0.233751 8 0.644740 0.888912 -0.2441719 9.9997e-01 2.0286e-06 hypomethylated 1.0000e+00 9.6602e-05 hypomethylated 9.9991e-01 2.3077e-05 hypomethylated 1.00000000 1.6484e-03 hypomethylated -0.2834643 8.4292e-04 hypomethylated 0.0468287 hypomethylated chr3 189429370 189430370 43096 LPP ENSG00000145012 0.92118 188 5 0.76592 191 7 0.73797 108 7 0.91345 154 5 0.91039 80 7 0.88544 257 7 0.80575 116 7 0.87584 104 5 0.74411 68 5 0.92364 52 5 0.87390 262 7 0.73111 34 5 0.899982 73 5 0.79762 20 1 0.96044 56 5 0.83333 48 6 0.68324 51 4 0.83947 136 5 0.927223 85 6 0.896172 217 7 0.73191 43 4 0.63331 138 5 0.91239 133 7 0.85939 80 5 0.80256 49 4 0.94398 201 7 0.80068 113 5 0.94015 64 5 0.91939 87 7 0.90032 228 7 0.940397 235 7 0.91345 306 7 0.950509 157 7 0.944444 58 7 0.8523810 205 5 0.892857 22 3 0.9751659 134 6 0.916330 160 7 0.936469 204 7 0.90514 176 7 0.933007 109 5 0.82396 80 5 0.873203 227 7 0.88174 0.75168 0.67774 0.87543 0.88488 0.84568 0.87154 0.78880 0.79010 0.87297 0.84432 0.71361 0.890556 0.69051 0.93086 0.80899 0.70404 0.83624 0.89656 0.899596 0.66903 0.597721 0.86877 0.85005 0.80777 0.93360 0.81940 0.91770 0.86701 0.88791 0.919785 0.91908 0.903493 0.961298 0.8294007 0.856883 0.962958 0.855692 0.934216 0.86222 0.917632 0.82647 0.809528 4 0.84870 0.86881 -0.02674378 7 0.87304 0.89687 -0.0238285 9.9490e-01 0.2232971 insignificant 1.0000000 1 insignificant 0.97490734 0.4679118 insignificant 1.00000 1 insignificant -0.0118522 0.72651 insignificant 1 insignificant 0.84863 0.900815 -0.05330227 7 0.85491 0.908822 -0.0539144 9.8038e-01 2.1880e-04 weaklyHypometh 1.0000e+00 3.6467e-02 weaklyHypometh 9.9995e-01 1.8629e-04 weaklyHypometh 1.0000e+00 3.7258e-02 weaklyHypometh -0.075639 9.2099e-03 weaklyHypometh 2.4892e-01 insignificant 0.84863 0.884422 -0.03295986 7 0.85491 0.905751 -0.0508431 9.3900e-01 0.00771167 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.1978e-01 0.0653392 insignificant 1.0000e+00 1.0000 insignificant -0.0480470 1.0949e-01 insignificant 1.0000000 insignificant 0.86874 0.900815 -0.0262617 7 0.88214 0.908822 -0.0266819 9.5018e-01 9.6519e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 1.1290e-03 weaklyHypometh 1.0000e+00 2.8226e-01 insignificant -0.0637867 7.5578e-02 insignificant 1.0000e+00 insignificant 0.86874 0.884422 -0.0126093 7 0.88214 0.905751 -0.0236106 8.4935e-01 0.2488584 insignificant 1.0000e+00 1 insignificant 8.1533e-01 0.176774 insignificant 1.0000e+00 1 insignificant -0.0361948 3.2034e-01 insignificant 1.00000000 insignificant 0.900815 0.884422 0.020799 7 0.908822 0.905751 0.0030713 1.3120e-01 7.5780e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6808e-02 9.9824e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.0275920 3.4720e-01 insignificant 1.0000000 insignificant chr3 191707315 191708315 43313 TMEM207 ENSG00000198398 0.70504 256 7 0.82873 111 7 0.83810 69 7 0.79766 158 7 0.74917 53 4 0.81340 234 7 0.79177 87 6 0.80034 103 6 0.84699 84 7 0.73576 91 6 0.81535 158 7 0.58896 76 7 0.818478 79 7 NA 0 0 0.81250 100 7 0.72831 66 6 0.57568 63 6 0.78232 206 7 0.793477 169 7 0.853623 193 7 0.84524 51 4 0.78615 68 7 0.79527 130 7 0.79150 35 4 0.83980 67 7 0.74133 140 7 0.76338 51 6 0.93636 37 3 0.84918 75 5 0.81160 109 7 0.676895 155 7 0.78061 296 7 0.736054 100 7 0.664598 106 7 0.6354337 156 7 0.789616 105 7 0.7957638 58 6 0.673520 172 7 0.838152 359 7 0.85705 209 7 0.858106 222 7 0.82403 188 7 0.847662 262 7 0.74218 0.84330 0.86126 0.80767 0.74387 0.81780 0.78293 0.77872 0.85130 0.77289 0.82405 0.63180 0.822691 NA 0.81380 0.74480 0.63615 0.80185 0.81773 0.850704 0.86053 0.789447 0.80568 0.81294 0.85583 0.77306 0.77617 0.91238 0.82486 0.82483 0.725632 0.79058 0.750992 0.702444 0.6562663 0.763434 0.803628 0.706280 0.846907 0.86644 0.874425 0.84202 0.867257 5 0.78311 0.78830 -0.00352588 7 0.77366 0.77737 -0.0037023 7.6001e-01 0.6228224 insignificant 1.0000000 1 insignificant 0.96321043 0.2020989 insignificant 1.00000 1 insignificant -0.0290375 0.27015 insignificant 1 insignificant 0.78311 0.718795 0.06581866 7 0.77366 0.707514 0.0661500 1.1468e-03 9.9993e-01 weaklyHypermeth 2.1638e-02 1.0000e+00 weaklyHypermeth 4.8043e-03 9.9984e-01 weaklyHypermeth 1.0919e-01 1.0000e+00 insignificant 0.056572 1.1905e-01 insignificant 1.0000e+00 insignificant 0.78311 0.846774 -0.06893782 7 0.77366 0.843621 -0.0699567 9.9976e-01 0.00023624 weaklyHypometh 1.0000e+00 0.23624 insignificant 9.9941e-01 0.0007473 weaklyHypometh 1.0000e+00 0.7473 insignificant -0.0725965 9.8924e-04 weaklyHypometh 0.0824364 weaklyHypometh 0.78830 0.718795 0.0701144 7 0.77737 0.707514 0.0698524 4.9116e-03 9.9982e-01 weaklyHypermeth 8.3248e-02 1.0000e+00 weaklyHypermeth 2.5155e-03 9.9999e-01 weaklyHypermeth 6.4500e-02 1.0000e+00 weaklyHypermeth 0.0856100 2.9039e-02 weaklyHypermeth 6.5999e-01 insignificant 0.78830 0.846774 -0.0637935 7 0.77737 0.843621 -0.0662543 9.9980e-01 0.0069451 weaklyHypometh 1.0000e+00 1 insignificant 9.9065e-01 0.125169 insignificant 1.0000e+00 1 insignificant -0.0435589 4.4263e-02 weaklyHypometh 1.00000000 insignificant 0.718795 0.846774 -0.133248 7 0.707514 0.843621 -0.1361067 1.0000e+00 4.2698e-07 weaklyHypometh 1.0000e+00 2.6686e-05 weaklyHypometh 1.0000e+00 3.2155e-06 weaklyHypometh 1.00000000 5.1775e-04 weaklyHypometh -0.1291690 4.8613e-03 weaklyHypometh 0.1667227 insignificant chr3 194255838 194256838 43432 C3orf59 ENSG00000180611 0.48475 263 7 0.56557 246 8 0.44433 170 7 0.58251 232 7 0.69259 102 6 0.57492 347 8 0.68971 156 6 0.51393 107 6 0.48698 134 6 0.57750 119 6 0.59077 282 7 0.66667 127 6 0.640271 148 7 0.61138 56 7 0.73069 182 7 0.49080 58 6 0.63416 193 6 0.57684 262 9 0.556255 107 6 0.544954 279 7 0.49375 67 7 0.61688 81 6 0.59386 172 6 0.64875 125 7 0.52811 91 7 0.54185 132 6 0.61349 87 6 0.54987 67 6 0.58695 112 7 0.50739 199 8 0.531836 188 7 0.58671 414 8 0.386579 205 8 0.498952 111 6 0.6142155 120 6 0.488167 66 6 0.5606072 136 8 0.490279 148 8 0.599064 236 7 0.48373 249 8 0.558563 223 7 0.55270 207 6 0.509343 264 7 0.60057 0.50858 0.56450 0.70325 0.63727 0.61379 0.64918 0.54573 0.61155 0.62392 0.58951 0.70702 0.636543 0.60663 0.64903 0.60688 0.71179 0.62216 0.65647 0.668871 0.66372 0.567901 0.62478 0.65198 0.63375 0.57837 0.66463 0.67324 0.62575 0.61262 0.597797 0.66296 0.494905 0.595599 0.6823728 0.565220 0.650133 0.596791 0.658026 0.61904 0.667136 0.59470 0.604494 6 0.59804 0.61210 -0.00088234 7 0.58882 0.54193 0.0468941 1.3384e-01 0.5455817 insignificant 1.0000000 1 insignificant 0.16352391 0.3634049 insignificant 1.00000 1 insignificant 0.0161593 0.47102 insignificant 1 insignificant 0.59804 0.583969 0.03989095 7 0.58882 0.498565 0.0902593 2.1039e-02 9.4395e-01 weaklyHypermeth 3.1401e-01 1.0000e+00 insignificant 1.8782e-01 7.9275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.076313 6.4603e-02 insignificant 1.0000e+00 insignificant 0.59804 0.560645 -0.00294780 7 0.58882 0.580066 0.0087584 5.4748e-01 0.76559126 insignificant 1.0000e+00 1.00000 insignificant 5.4181e-01 0.7725894 insignificant 1.0000e+00 1.0000 insignificant 0.0421013 1.4092e-01 insignificant 1.0000000 insignificant 0.61210 0.583969 0.0384167 7 0.54193 0.498565 0.0433652 1.1582e-02 6.9776e-01 weaklyHypermeth 1.8988e-01 1.0000e+00 insignificant 2.0992e-01 4.9481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0601541 1.2301e-01 insignificant 1.0000e+00 insignificant 0.61210 0.560645 -0.0032692 7 0.54193 0.580066 -0.0381357 6.0565e-01 0.3771902 insignificant 1.0000e+00 1 insignificant 6.0234e-01 0.504598 insignificant 1.0000e+00 1 insignificant 0.0259419 3.1940e-01 insignificant 1.00000000 insignificant 0.583969 0.560645 -0.038027 7 0.498565 0.580066 -0.0815009 5.4463e-01 2.0162e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7203e-01 5.8408e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0342122 3.8503e-01 insignificant 1.0000000 insignificant chr3 194437517 194438517 43445 ENSG00000220985 0.81197 399 8 0.67970 136 9 0.73433 115 8 0.72835 227 8 0.62317 193 8 0.71864 240 9 0.75784 237 8 0.67274 114 8 0.68263 135 10 0.74755 143 8 0.66853 237 8 0.55622 153 8 0.833370 216 9 0.80826 92 8 0.77397 198 8 0.59990 99 8 0.67869 643 8 0.69841 298 10 0.716071 84 8 0.723842 200 8 0.79115 67 9 0.73353 100 9 0.86088 206 8 0.69188 115 8 0.83884 109 8 0.69543 158 8 0.78184 50 3 0.76318 67 7 0.59831 89 8 0.64014 139 9 0.774680 157 10 0.70129 303 9 0.741859 160 10 0.645476 131 8 0.7012650 150 8 0.788576 109 8 0.7119643 78 7 0.872188 146 7 0.787297 261 8 0.72922 283 8 0.827185 258 8 0.77570 372 8 0.690289 263 8 0.73993 0.65322 0.65436 0.73022 0.70942 0.72745 0.71671 0.67522 0.62837 0.75014 0.68274 0.63789 0.784868 0.79935 0.74872 0.65113 0.70869 0.66969 0.71781 0.779831 0.77353 0.727944 0.82129 0.68584 0.80524 0.71690 0.79167 0.74988 0.61348 0.62794 0.726907 0.68077 0.717163 0.615492 0.7040029 0.755411 0.706432 0.817457 0.767998 0.70760 0.782055 0.75484 0.733632 8 0.71484 0.72372 -0.00606841 8 0.72391 0.74627 -0.0223616 9.3599e-01 0.4304128 insignificant 1.0000000 1 insignificant 0.96721893 0.1875631 insignificant 1.00000 1 insignificant -0.0285541 0.30836 insignificant 1 insignificant 0.71484 0.718346 0.00062206 8 0.72391 0.747964 -0.0240570 8.1030e-01 2.8867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2707e-01 1.4167e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.032846 3.8674e-01 insignificant 1.0000e+00 insignificant 0.71484 0.745303 -0.03213907 8 0.72391 0.768980 -0.0450735 9.8520e-01 0.03207857 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9358e-01 0.0125570 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0512298 1.1002e-01 insignificant 1.0000000 insignificant 0.72372 0.718346 0.0032183 8 0.74627 0.747964 -0.0016954 8.1785e-01 7.8210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0577e-01 7.5488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0042919 9.1496e-01 insignificant 1.0000e+00 insignificant 0.72372 0.745303 -0.0266526 8 0.74627 0.768980 -0.0227119 9.7822e-01 0.2935613 insignificant 1.0000e+00 1 insignificant 9.8123e-01 0.389601 insignificant 1.0000e+00 1 insignificant -0.0226756 5.0193e-01 insignificant 1.00000000 insignificant 0.718346 0.745303 -0.029488 8 0.747964 0.768980 -0.0210165 9.7670e-01 3.0712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9740e-01 3.4582e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0183837 6.5681e-01 insignificant 1.0000000 insignificant chr3 194911088 194912088 43463 ENSG00000207370 0.78384 315 6 0.81420 340 6 0.89426 187 6 0.54170 211 6 0.74889 124 6 0.70708 314 6 0.79882 255 6 0.75744 187 6 0.85227 148 5 0.71405 72 5 0.84159 300 6 0.80789 59 5 0.747547 151 5 0.51810 124 5 0.46709 169 6 1.00000 21 2 0.60000 5 1 0.61311 256 6 0.885311 331 6 0.317179 262 6 0.88259 75 6 0.17850 124 6 0.58354 172 5 0.52062 126 6 0.60743 234 6 0.60599 387 6 0.79096 166 5 0.66081 67 5 0.59614 336 6 0.55850 473 6 0.728930 433 6 0.88181 269 6 0.736928 240 6 0.729815 190 6 0.5326797 156 5 0.632175 156 3 0.7768912 232 6 0.368291 428 6 0.046981 481 6 0.27088 201 6 0.210398 229 5 0.40239 290 6 0.218862 202 5 0.79115 0.81863 0.89974 0.52139 0.72958 0.67750 0.77991 0.77920 0.81144 0.68709 0.82128 0.81672 0.728032 0.65660 0.46846 1.00000 NA 0.73692 0.88627 0.333245 0.88324 0.161730 0.62200 0.52294 0.58843 0.58657 0.71058 0.75135 0.57973 0.53090 0.749629 0.85631 0.815736 0.790439 0.5605318 0.736274 0.812889 0.416563 0.040167 0.28527 0.202786 0.45431 0.176006 4 0.72566 0.61552 0.10742149 6 0.62224 0.53197 0.0902756 8.1530e-04 0.9999230 weaklyHypermeth 0.4076488 1 insignificant 0.00760916 0.9999887 weaklyHypermeth 1.00000 1 insignificant 0.0875339 0.19739 insignificant 1 insignificant 0.72604 0.605563 0.08854066 6 0.72595 0.590925 0.1350231 1.5449e-04 7.0149e-01 weaklyHypermeth 2.9709e-03 1.0000e+00 weaklyHypermeth 7.5023e-03 3.2146e-01 weaklyHypermeth 1.5962e-01 1.0000e+00 insignificant 0.091056 2.4790e-01 insignificant 1.0000e+00 insignificant 0.72604 0.209551 0.52182938 6 0.72595 0.196465 0.5294824 1.3681e-26 1.00000000 hypermethylated 4.5604e-24 1.00000 hypermethylated 2.8210e-14 1.0000000 hypermethylated 9.4032e-12 1.0000 hypermethylated 0.4906174 1.0599e-04 hypermethylated 0.0132490 hypermethylated 0.61573 0.605563 -0.0075106 6 0.62063 0.590925 0.0297015 8.9440e-02 1.2236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2359e-01 9.9775e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0035222 9.6706e-01 insignificant 1.0000e+00 insignificant 0.61573 0.209551 0.4207803 6 0.62063 0.196465 0.4241609 8.8883e-16 1.0000000 hypermethylated 1.7777e-13 1 hypermethylated 4.9073e-10 1.000000 hypermethylated 9.8145e-08 1 hypermethylated 0.4030834 3.2227e-04 hypermethylated 0.04603789 hypermethylated 0.605563 0.209551 0.429996 6 0.590925 0.196465 0.3944593 3.7756e-09 1.0000e+00 hypermethylated 7.5512e-07 1.0000e+00 hypermethylated 2.1161e-06 1.0000e+00 hypermethylated 0.00070538 1.0000e+00 hypermethylated 0.3995612 1.1586e-03 weaklyHypermeth 0.0579282 weaklyHypermeth chr3 194911280 194912280 43464 ENSG00000207370 0.79687 355 7 0.84074 349 7 0.88556 193 7 0.55574 236 7 0.74905 132 7 0.70131 341 7 0.77994 258 6 0.74014 209 7 0.86038 159 6 0.68897 85 6 0.85124 322 7 0.83534 67 6 0.746018 170 6 0.51810 124 5 0.46248 192 7 1.00000 25 2 0.67500 9 1 0.58648 286 7 0.877886 349 7 0.331101 303 7 0.79732 82 7 0.15810 152 7 0.59908 185 6 0.54148 135 7 0.59208 248 7 0.63139 424 7 0.79436 177 6 0.70321 77 6 0.59261 350 7 0.58348 503 7 0.723011 449 7 0.87583 319 7 0.764306 254 7 0.696984 204 7 0.5326797 156 5 0.587768 167 4 0.7928908 241 7 0.341188 456 7 0.040269 552 7 0.25551 250 7 0.180341 267 6 0.36816 333 7 0.213106 258 6 0.79760 0.83258 0.89463 0.53051 0.73115 0.67666 0.77120 0.76821 0.81895 0.67566 0.82803 0.83082 0.728710 0.66275 0.46587 1.00000 0.71711 0.71100 0.88220 0.339506 0.83727 0.152037 0.62741 0.53399 0.58163 0.60174 0.71886 0.77048 0.57909 0.54648 0.744850 0.85506 0.824416 0.768098 0.5628075 0.714602 0.818735 0.398256 0.037077 0.27588 0.187187 0.43188 0.176204 4 0.72166 0.61839 0.10066615 7 0.62892 0.54706 0.0818606 1.2540e-03 0.9998379 weaklyHypermeth 0.4179991 1 insignificant 0.00635084 0.9999949 weaklyHypermeth 1.00000 1 insignificant 0.0914526 0.16874 insignificant 1 insignificant 0.72201 0.600135 0.09433999 7 0.71877 0.577935 0.1408306 7.9816e-05 8.1997e-01 weaklyHypermeth 1.6289e-03 1.0000e+00 weaklyHypermeth 7.2835e-03 4.4084e-01 weaklyHypermeth 1.5834e-01 1.0000e+00 insignificant 0.104814 2.1678e-01 insignificant 1.0000e+00 insignificant 0.72201 0.192169 0.52654709 7 0.71877 0.182295 0.5364705 8.5070e-31 1.00000000 hypermethylated 4.2535e-28 1.00000 hypermethylated 2.2641e-16 1.0000000 hypermethylated 1.1321e-13 1.0000 hypermethylated 0.5126398 3.7768e-05 hypermethylated 0.0075536 hypermethylated 0.61859 0.600135 0.0021197 7 0.62521 0.577935 0.0472756 6.8600e-02 1.9977e-01 insignificant 9.9420e-01 1.0000e+00 insignificant 1.4674e-01 1.4669e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0133614 8.8053e-01 insignificant 1.0000e+00 insignificant 0.61859 0.192169 0.4320494 7 0.62521 0.182295 0.4429155 4.8558e-18 1.0000000 hypermethylated 2.4279e-15 1 hypermethylated 1.9117e-11 1.000000 hypermethylated 9.6636e-09 1 hypermethylated 0.4211873 1.2696e-04 hypermethylated 0.02115918 hypermethylated 0.600135 0.192169 0.428449 7 0.577935 0.182295 0.3956400 6.8351e-10 1.0000e+00 hypermethylated 1.7088e-07 1.0000e+00 hypermethylated 2.0030e-07 1.0000e+00 hypermethylated 0.00020030 1.0000e+00 hypermethylated 0.4078258 1.2239e-03 weaklyHypermeth 0.0582793 weaklyHypermeth chr3 194972544 194973544 43467 ENSG00000208326 0.87356 340 7 0.83128 383 7 0.84675 196 7 0.59922 233 4 0.75007 170 7 0.86081 365 7 0.84808 192 7 0.89592 305 7 0.79054 289 7 0.82752 279 7 0.87852 313 7 0.78989 134 7 0.717723 380 7 0.80749 177 4 0.70847 329 7 0.86402 116 6 0.80340 70 7 0.42469 340 4 0.874730 253 7 0.683934 287 7 0.87836 125 7 0.10822 146 4 0.79912 274 7 0.72028 136 7 0.83922 68 4 0.76042 391 7 0.73732 147 7 0.88776 99 7 0.77483 256 7 0.89098 478 7 0.751515 374 7 0.87664 279 7 0.617699 340 7 0.607807 149 7 0.9305406 339 7 0.071429 25 3 0.8932932 195 7 0.070403 368 7 0.031969 408 5 0.16478 299 7 0.115407 269 5 0.29385 270 5 0.159444 268 4 0.88241 0.80439 0.86248 0.66321 0.82186 0.84794 0.89242 0.86490 0.84377 0.87101 0.89001 0.82893 0.778022 0.80516 0.74734 0.89168 0.84688 0.58743 0.87097 0.774719 0.96130 0.138839 0.77026 0.76926 0.83675 0.75783 0.73951 0.93907 0.85316 0.90373 0.736682 0.89202 0.630733 0.862520 0.9219408 0.090615 0.897905 0.062583 0.051923 0.18888 0.171403 0.37199 0.196285 4 0.80839 0.77822 0.02865501 7 0.79657 0.77293 0.0236420 2.0415e-01 0.9020986 insignificant 1.0000000 1 insignificant 0.55305880 0.7018955 insignificant 1.00000 1 insignificant 0.0317741 0.63906 insignificant 1 insignificant 0.80839 0.574859 0.22511324 7 0.79657 0.539323 0.2572521 4.5873e-09 1.0000e+00 hypermethylated 1.4798e-07 1.0000e+00 hypermethylated 4.8679e-02 9.9848e-01 weaklyHypermeth 8.3930e-01 1.0000e+00 insignificant 0.251968 1.6825e-01 insignificant 1.0000e+00 insignificant 0.80839 0.186262 0.62738732 5 0.79657 0.148715 0.6478599 7.7541e-61 1.00000000 hypermethylated 7.7541e-58 1.00000 hypermethylated 9.5035e-17 1.0000000 hypermethylated 9.5035e-14 1.0000 hypermethylated 0.6307408 3.3297e-06 hypermethylated 0.0011099 hypermethylated 0.77822 0.574859 0.1991395 7 0.77293 0.539323 0.2336101 7.1428e-05 9.9999e-01 weaklyHypermeth 1.7421e-03 1.0000e+00 weaklyHypermeth 1.3954e-01 9.9658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.2201942 2.3215e-01 insignificant 1.0000e+00 insignificant 0.77822 0.186262 0.5986650 5 0.77293 0.148715 0.6242179 7.7045e-32 1.0000000 hypermethylated 7.7045e-29 1 hypermethylated 1.9327e-11 1.000000 hypermethylated 9.6636e-09 1 hypermethylated 0.5989668 9.1605e-07 hypermethylated 0.00045803 hypermethylated 0.574859 0.186262 0.417234 5 0.539323 0.148715 0.3906079 2.1037e-05 1.0000e+00 hypermethylated 2.6296e-03 1.0000e+00 hypermethylated 2.6474e-03 1.0000e+00 weaklyHypermeth 0.33092186 1.0000e+00 insignificant 0.3787725 5.9321e-02 insignificant 1.0000000 insignificant chr3 195174309 195175309 43482 ENSG00000208326 0.75789 99 5 0.63799 90 5 0.64079 48 5 0.76481 62 6 0.53818 39 2 0.82460 62 5 0.63145 76 5 0.64844 81 5 0.74958 69 5 0.62944 73 5 0.81817 119 5 0.48000 50 5 0.682028 84 5 NA 0 0 0.64498 65 5 0.76190 34 5 0.61663 198 7 0.50317 48 5 0.859287 80 5 0.534848 58 5 0.95556 28 4 0.16667 7 0 0.87504 87 5 0.74333 18 1 NA 0 0 0.68064 102 9 0.88333 35 5 0.87000 21 2 0.59020 62 1 0.63011 101 6 0.822721 109 7 0.91498 128 5 0.124868 99 5 0.165644 96 5 0.6000000 109 4 0.243386 114 4 0.6000000 37 5 0.281296 172 7 0.545174 78 7 0.52257 107 6 0.450000 54 4 0.71104 52 4 0.262500 82 9 0.81067 0.64437 0.64467 0.72292 0.54116 0.78123 0.62517 0.65421 0.74091 0.63067 0.81299 0.48090 0.667100 NA 0.63559 0.77381 0.47286 0.49901 0.79928 0.630429 0.95370 0.378368 0.73803 0.74653 NA 0.61032 0.87847 0.88681 0.56618 0.68979 0.797231 0.84954 0.123158 0.158548 NA 0.103009 0.594907 0.158526 0.476852 0.38234 0.351389 0.59144 0.140680 0 0.71359 0.77507 -0.08993434 5 0.66516 0.80384 -0.1386840 6.3545e-01 0.0183419 weaklyHypometh 1.0000000 1 insignificant 0.89703304 0.0077018 weaklyHypometh 1.00000 1 insignificant -0.0696314 0.35434 lowCoverage 1 lowCoverage 0.71608 0.320574 0.40489033 5 0.73907 0.309924 0.4291409 2.8452e-26 1.0000e+00 hypermethylated 2.3710e-24 1.0000e+00 hypermethylated 4.1710e-10 1.0000e+00 hypermethylated 4.1710e-08 1.0000e+00 hypermethylated 0.333829 1.0406e-02 lowCoverage 2.7384e-01 lowCoverage 0.71608 0.486559 0.24220582 5 0.73907 0.476711 0.2623544 2.5606e-13 1.00000000 hypermethylated 2.8451e-11 1.00000 hypermethylated 2.4467e-07 0.9999999 hypermethylated 2.4467e-05 1.0000 hypermethylated 0.1714389 7.6597e-02 lowCoverage 1.0000000 lowCoverage 0.77475 0.320574 0.5077126 5 0.78205 0.309924 0.4721231 1.5204e-20 1.0000e+00 hypermethylated 1.0860e-18 1.0000e+00 hypermethylated 2.6586e-08 1.0000e+00 hypermethylated 2.9540e-06 1.0000e+00 hypermethylated 0.4034605 3.7107e-03 lowCoverage 1.0914e-01 lowCoverage 0.77475 0.486559 0.3390569 5 0.78205 0.476711 0.3053366 2.0641e-12 0.9999997 hypermethylated 2.9488e-10 1 hypermethylated 9.6329e-07 0.999999 hypermethylated 1.0703e-04 1 hypermethylated 0.2410703 3.4366e-02 lowCoverage 1.00000000 lowCoverage 0.320574 0.486559 -0.188143 7 0.309924 0.476711 -0.1667865 9.9198e-01 1.1129e-04 weaklyHypometh 1.0000e+00 4.1218e-03 weaklyHypometh 9.9876e-01 3.8527e-03 weaklyHypometh 1.00000000 1.2842e-01 insignificant -0.1623902 1.8489e-01 insignificant 1.0000000 insignificant chr3 195486325 195487325 43500 ENSG00000208323 0.34463 124 5 0.45230 425 5 0.41414 117 5 0.28482 109 5 0.49445 150 5 0.46300 396 5 0.61114 214 5 0.40128 187 5 0.51107 143 5 0.42491 83 4 0.59895 290 5 0.42725 55 4 0.284601 88 5 0.33100 98 4 0.28286 145 4 0.45638 79 4 0.00000 9 1 0.40002 98 5 0.282770 201 5 0.262744 474 5 0.31944 52 4 0.12222 61 4 0.54578 136 5 0.29556 142 8 0.46654 66 3 0.41112 349 5 0.50431 154 4 0.41037 73 4 0.24614 169 5 0.29734 331 5 0.232713 465 5 0.56540 387 5 0.670866 162 5 0.771055 98 5 0.7543860 137 4 0.200000 30 1 0.6284590 220 5 0.250002 323 5 0.215832 385 5 0.14813 216 5 0.170725 82 5 0.47308 77 5 0.225246 172 5 0.23144 0.34608 0.42057 0.24701 0.17461 0.35182 0.38226 0.32775 0.30431 0.34169 0.38377 0.57158 0.075518 0.20261 0.21023 0.29667 NA 0.32227 0.16365 0.131356 0.45205 0.034620 0.45901 0.21691 0.30971 0.22567 0.23265 0.23991 0.19689 0.17002 0.151230 0.50078 0.676834 0.766201 0.6696851 0.028037 0.830657 0.075862 0.023336 0.12378 0.095584 0.38896 0.142276 4 0.30023 0.29266 0.01925487 5 0.50420 0.36408 0.1401136 1.2437e-01 0.8631500 insignificant 1.0000000 1 insignificant 0.48420956 0.9651164 insignificant 1.00000 1 insignificant 0.0183382 0.71778 lowCoverage 1 lowCoverage 0.29856 0.534021 -0.20912704 5 0.45167 0.461641 -0.0099681 9.9979e-01 1.4436e-03 weaklyHypometh 1.0000e+00 2.0622e-01 insignificant 9.9645e-01 1.4757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.159379 1.9237e-01 lowCoverage 1.0000e+00 lowCoverage 0.29856 0.125536 0.18727751 5 0.45167 0.283207 0.1684664 6.0108e-06 0.99584768 weaklyHypermeth 2.8623e-04 1.00000 weaklyHypermeth 1.6307e-03 0.9957065 weaklyHypermeth 7.7651e-02 1.0000 weaklyHypermeth 0.1398144 7.5231e-02 lowCoverage 1.0000000 lowCoverage 0.29249 0.534021 -0.2272089 5 0.33010 0.461641 -0.1315388 9.7454e-01 2.9200e-03 weaklyHypometh 1.0000e+00 4.8667e-01 insignificant 9.8424e-01 1.5008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1777172 1.5738e-01 lowCoverage 1.0000e+00 lowCoverage 0.29249 0.125536 0.1694565 5 0.33010 0.283207 0.0468958 3.9333e-04 0.9397974 weaklyHypermeth 1.8730e-02 1 weaklyHypermeth 2.7774e-02 0.967449 weaklyHypermeth 1.0000e+00 1 insignificant 0.1214762 1.2399e-01 lowCoverage 1.00000000 lowCoverage 0.534021 0.125536 0.397568 5 0.461641 0.283207 0.1784345 1.3227e-03 9.8968e-01 weaklyHypermeth 1.1023e-01 1.0000e+00 insignificant 1.8709e-01 9.9864e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.2991934 3.7431e-02 lowCoverage 0.8318045 lowCoverage chr3 195494820 195495820 43501 ENSG00000208323 0.17775 138 5 0.20895 298 5 0.22804 100 5 0.28979 127 5 0.14268 99 5 0.22602 384 5 0.26020 164 5 0.23560 173 5 0.21338 169 5 0.18790 114 5 0.36987 184 5 0.41247 54 5 0.086395 181 5 0.30922 85 5 0.13912 138 5 0.18571 28 3 0.18889 12 2 0.35534 104 5 0.087157 94 5 0.041663 323 5 0.56183 51 4 0.05000 87 3 0.29373 157 5 0.17302 135 5 0.30769 31 2 0.11485 357 5 0.16854 149 5 0.29583 66 3 0.15080 123 5 0.14431 372 5 0.063576 356 5 0.40401 294 5 0.865263 158 5 0.637485 98 5 0.9900000 106 3 0.500000 22 2 0.9008374 106 5 0.783311 232 5 0.025563 263 5 0.12725 167 5 0.029915 70 5 0.13576 65 5 0.048182 99 5 0.19043 0.24446 0.26069 0.21614 0.16986 0.24101 0.27875 0.25059 0.27939 0.18962 0.40126 0.47464 0.088748 0.33827 0.15171 0.21265 0.27965 0.40392 0.09406 0.046299 0.66687 0.157046 0.32679 0.21076 0.33595 0.14890 0.18297 0.38103 0.17376 0.15667 0.086241 0.44780 0.877873 0.664981 0.8800087 0.604965 0.893719 0.812281 0.030830 0.14242 0.035431 0.13412 0.052087 4 0.21672 0.21212 0.01397300 5 0.33703 0.15678 0.1802458 5.6144e-01 0.9290250 insignificant 1.0000000 1 insignificant 0.57270978 0.7963569 insignificant 1.00000 1 insignificant -0.0100416 0.83847 lowCoverage 1 lowCoverage 0.21672 0.860111 -0.61151915 5 0.33703 0.831300 -0.4942696 1.0000e+00 5.5778e-37 hypomethylated 1.0000e+00 5.5778e-34 hypomethylated 1.0000e+00 2.0918e-09 hypomethylated 1.0000e+00 2.0918e-06 hypomethylated -0.562175 3.7523e-04 lowCoverage 1.5009e-02 lowCoverage 0.21645 0.075301 0.15690582 5 0.20444 0.066662 0.1377745 3.8834e-06 0.99999655 weaklyHypermeth 2.0439e-04 1.00000 weaklyHypermeth 1.0856e-06 0.9999929 weaklyHypermeth 9.1999e-05 1.0000 weaklyHypermeth 0.1439740 8.8619e-04 lowCoverage 0.0805624 lowCoverage 0.21212 0.860111 -0.6367788 5 0.15678 0.831300 -0.6745153 1.0000e+00 1.1824e-24 hypomethylated 1.0000e+00 1.1824e-21 hypomethylated 1.0000e+00 4.5591e-08 hypomethylated 1.0000e+00 4.5591e-05 hypomethylated -0.5521333 1.5070e-04 lowCoverage 7.5352e-03 lowCoverage 0.21241 0.075301 0.1411608 5 0.18814 0.066662 0.1214796 6.3936e-04 0.9999224 weaklyHypermeth 2.7798e-02 1 weaklyHypermeth 1.0970e-04 0.999937 weaklyHypermeth 7.7111e-03 1 weaklyHypermeth 0.1540156 7.3167e-03 lowCoverage 0.60972518 lowCoverage 0.859917 0.075301 0.777592 5 0.797560 0.066662 0.7308980 1.4180e-20 1.0000e+00 hypermethylated 1.4180e-17 1.0000e+00 hypermethylated 1.1666e-06 1.0000e+00 hypermethylated 0.00058329 1.0000e+00 hypermethylated 0.7061490 9.8466e-05 lowCoverage 0.0089515 lowCoverage chr3 197103677 197104677 43534 MUC4 ENSG00000145113 0.52417 332 14 0.56566 331 14 0.81713 233 11 0.62338 194 11 0.40358 174 13 0.64377 446 14 0.47486 405 14 0.50874 346 14 0.57055 384 14 0.68970 282 13 0.69025 475 14 0.59694 199 11 0.146441 582 14 0.66335 91 4 0.34239 435 14 0.78776 100 9 0.53738 97 10 0.50152 340 13 0.638652 321 14 0.462896 413 13 0.55262 122 10 0.19637 182 12 0.73283 328 14 0.37254 212 14 0.55184 320 9 0.31025 543 14 0.48048 334 15 0.42969 190 15 0.59743 351 14 0.21284 670 14 0.381244 474 14 0.67603 447 14 0.095634 408 14 0.091926 380 14 0.0010776 736 14 0.000000 166 10 0.1071042 273 15 0.077864 542 14 0.368090 373 13 0.29091 478 13 0.469550 150 10 0.32618 387 12 0.346658 219 12 0.53390 0.50608 0.77646 0.59877 0.44530 0.71857 0.55252 0.52562 0.58476 0.71895 0.75262 0.59613 0.171967 0.72539 0.37811 0.85603 0.57353 0.47730 0.68502 0.477037 0.63923 0.183282 0.73641 0.41286 0.53185 0.36444 0.48823 0.48056 0.58454 0.16256 0.396668 0.70730 0.092047 0.023985 0.0023756 0.000000 0.044724 0.014671 0.341385 0.29414 0.407510 0.34168 0.357133 8 0.54693 0.42847 0.10530759 14 0.47087 0.48792 -0.0170498 4.2928e-06 1.0000000 weaklyHypermeth 0.0042928 1 weaklyHypermeth 0.00020932 0.9995834 weaklyHypermeth 0.20932 1 insignificant 0.1016080 0.10696 insignificant 1 insignificant 0.54756 0.025549 0.52299443 14 0.53832 0.070190 0.4681344 1.7112e-60 1.0000e+00 hypermethylated 5.7040e-58 1.0000e+00 hypermethylated 9.6770e-33 1.0000e+00 hypermethylated 4.8385e-30 1.0000e+00 hypermethylated 0.497187 6.0023e-12 hypermethylated 8.5747e-10 hypermethylated 0.54756 0.283759 0.22898797 12 0.53832 0.320967 0.2173577 8.1425e-15 0.99999844 hypermethylated 1.3571e-12 1.00000 hypermethylated 4.8739e-13 0.9999998 hypermethylated 1.2185e-10 1.0000 hypermethylated 0.1991783 5.1494e-04 weaklyHypermeth 0.0514940 weaklyHypermeth 0.42816 0.025549 0.4055343 14 0.42315 0.070190 0.3529644 1.9984e-34 1.0000e+00 hypermethylated 3.9969e-32 1.0000e+00 hypermethylated 3.6023e-25 1.0000e+00 hypermethylated 1.8012e-22 1.0000e+00 hypermethylated 0.3955795 3.3311e-06 hypermethylated 2.3793e-04 hypermethylated 0.42816 0.283759 0.1278465 12 0.42315 0.320967 0.1021877 1.0379e-04 0.9944743 weaklyHypermeth 5.1894e-03 1 weaklyHypermeth 2.3656e-04 0.998549 weaklyHypermeth 1.3915e-02 1 weaklyHypermeth 0.0975703 1.1358e-01 insignificant 1.00000000 insignificant 0.025549 0.283759 -0.282026 12 0.070190 0.320967 -0.2507767 1.0000e+00 4.0432e-38 hypomethylated 1.0000e+00 2.0216e-35 hypomethylated 1.0000e+00 2.9218e-14 hypomethylated 1.00000000 1.4609e-11 hypomethylated -0.2980091 6.5930e-05 hypomethylated 0.0073255 hypomethylated chr3 197738677 197739677 43538 C3orf43 ENSG00000214097 0.52827 114 6 0.58019 121 6 0.66159 89 8 0.57250 67 6 0.71165 72 8 0.60456 225 8 0.58981 83 6 0.60076 111 8 0.48858 95 6 0.65613 134 8 0.64759 242 8 0.57228 86 6 0.620974 166 8 0.55000 40 5 0.46629 87 6 0.70285 83 8 0.50690 674 6 0.65451 121 8 0.644097 125 8 0.632164 180 8 0.58021 74 8 0.54960 64 4 0.79678 112 8 0.62060 123 8 0.54601 84 8 0.67075 179 8 0.53823 87 4 0.52199 86 4 0.53436 93 8 0.68501 179 8 0.665969 215 8 0.56309 283 8 0.605230 103 8 0.503679 99 8 0.4404203 174 6 0.487662 78 8 0.6553391 92 8 0.499349 204 8 0.502533 100 6 0.69717 164 8 0.686111 70 8 0.51065 124 6 0.628975 158 8 0.63628 0.54531 0.66720 0.66836 0.72843 0.62047 0.65755 0.58146 0.56917 0.65570 0.64211 0.63986 0.620220 0.66338 0.55914 0.66200 0.63179 0.67130 0.63198 0.653502 0.64852 0.607407 0.78736 0.69126 0.60113 0.66844 0.56354 0.60259 0.55082 0.69021 0.661260 0.59266 0.560422 0.386988 0.5332955 0.450147 0.618678 0.550194 0.582157 0.69506 0.665086 0.63573 0.633077 4 0.63465 0.68588 0.00859954 8 0.62771 0.61415 0.0135662 3.0393e-02 0.0238667 weaklyHypermeth 1.0000000 1 insignificant 0.12871660 0.4346128 insignificant 1.00000 1 insignificant -0.0064651 0.82274 insignificant 1 insignificant 0.63465 0.546667 0.09503239 8 0.62771 0.550849 0.0768651 1.1848e-05 9.8535e-01 weaklyHypermeth 2.7220e-04 1.0000e+00 weaklyHypermeth 7.2524e-04 9.8470e-01 weaklyHypermeth 2.0286e-02 1.0000e+00 weaklyHypermeth 0.067638 1.0388e-01 insignificant 1.0000e+00 insignificant 0.63465 0.699675 -0.00786857 8 0.62771 0.632158 -0.0044438 1.2189e-01 0.10117542 insignificant 1.0000e+00 1.00000 insignificant 3.4847e-01 0.2403536 insignificant 1.0000e+00 1.0000 insignificant -0.0055030 9.0636e-01 insignificant 1.0000000 insignificant 0.68588 0.546667 0.1007033 8 0.61415 0.550849 0.0632988 8.9422e-05 9.2432e-01 weaklyHypermeth 2.1291e-03 1.0000e+00 weaklyHypermeth 6.2573e-03 8.8302e-01 weaklyHypermeth 1.4221e-01 1.0000e+00 insignificant 0.0741030 9.9103e-02 insignificant 1.0000e+00 insignificant 0.68588 0.699675 -0.0324567 8 0.61415 0.632158 -0.0180100 5.8182e-01 0.3173121 insignificant 1.0000e+00 1 insignificant 6.8930e-01 0.384552 insignificant 1.0000e+00 1 insignificant 0.0009621 9.8468e-01 insignificant 1.00000000 insignificant 0.546667 0.699675 -0.108769 8 0.550849 0.632158 -0.0813088 9.7994e-01 6.6179e-03 weaklyHypometh 1.0000e+00 1.5041e-01 insignificant 9.4880e-01 2.0166e-02 weaklyHypometh 1.00000000 4.5833e-01 insignificant -0.0731409 2.0738e-01 insignificant 1.0000000 insignificant chr3 198845466 198846466 43563 BDH1 ENSG00000161267 0.72978 175 7 0.76192 238 7 0.58110 175 7 0.93217 70 4 0.75623 257 7 0.58811 115 7 0.76102 318 7 0.74025 191 7 0.76384 236 7 0.82463 185 7 0.73735 228 7 0.61374 144 7 0.676943 224 7 0.85714 28 4 0.78047 230 7 0.63083 124 4 0.65710 161 6 0.69137 103 7 0.692461 222 7 0.594901 93 6 0.64388 34 4 0.74988 58 4 0.62854 175 7 0.71793 78 7 0.54089 96 4 0.87247 296 7 0.78554 105 7 0.67940 55 4 0.76166 164 7 0.71516 309 7 0.748841 317 7 0.85937 280 7 0.520003 214 7 0.676181 193 7 0.0625000 31 4 0.697619 39 4 0.5210803 107 7 0.629389 216 7 0.711115 181 7 0.73130 175 7 0.903680 45 4 0.71599 99 4 0.951971 97 4 0.79269 0.82422 0.64733 0.89838 0.79900 0.74088 0.78986 0.80064 0.80828 0.85757 0.83320 0.73567 0.822220 0.80388 0.80576 0.67611 0.61061 0.77708 0.70560 0.664093 0.62568 0.801656 0.68987 0.81219 0.81770 0.87731 0.83772 0.73482 0.77064 0.78814 0.782934 0.87576 0.592716 0.717325 0.1545737 0.692758 0.575736 0.603718 0.779696 0.74640 0.912383 0.78295 0.919647 4 0.70433 0.76614 -0.03382348 7 0.71579 0.78944 -0.0736456 9.8742e-01 0.0155512 weaklyHypometh 1.0000000 1 insignificant 0.98022119 0.0368982 weaklyHypometh 1.00000 1 insignificant -0.0067276 0.84620 insignificant 1 insignificant 0.70433 0.592500 0.12130570 7 0.71579 0.508608 0.2071818 7.2077e-12 9.4878e-01 weaklyHypermeth 3.0032e-10 1.0000e+00 weaklyHypermeth 3.2650e-05 7.3535e-01 weaklyHypermeth 1.4196e-03 1.0000e+00 weaklyHypermeth 0.200773 9.1778e-02 insignificant 1.0000e+00 insignificant 0.70436 0.793970 -0.02427860 7 0.72281 0.757546 -0.0347386 9.8380e-01 0.19625021 insignificant 1.0000e+00 1.00000 insignificant 9.9967e-01 0.0212688 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0842422 1.8716e-01 insignificant 1.0000000 insignificant 0.76578 0.593242 0.1560453 7 0.75935 0.581266 0.1780885 3.6660e-10 9.9201e-01 weaklyHypermeth 1.5275e-08 1.0000e+00 weaklyHypermeth 3.8713e-05 9.5758e-01 weaklyHypermeth 1.8435e-03 1.0000e+00 weaklyHypermeth 0.2075004 8.4546e-02 insignificant 1.0000e+00 insignificant 0.76578 0.793970 0.0084753 7 0.75935 0.757546 0.0018088 4.9286e-01 0.6322026 insignificant 1.0000e+00 1 insignificant 9.0923e-01 0.173239 insignificant 1.0000e+00 1 insignificant -0.0775147 2.3049e-01 insignificant 1.00000000 insignificant 0.593242 0.793970 -0.197926 7 0.581266 0.757546 -0.1762797 9.9795e-01 2.4691e-05 weaklyHypometh 1.0000e+00 1.0288e-03 weaklyHypometh 9.9975e-01 1.2893e-05 weaklyHypometh 1.00000000 9.9174e-04 weaklyHypometh -0.2850151 3.2727e-02 weaklyHypometh 0.7597300 insignificant chr3 199091339 199092339 43565 LRCH3 ENSG00000186001 0.73789 347 11 0.74408 96 7 0.50514 78 7 0.78562 290 11 0.62593 45 4 0.71779 341 11 0.71474 61 4 0.73333 70 6 0.88404 78 7 0.77583 43 4 0.71689 182 8 0.84722 39 4 0.910738 90 6 NA 0 0 0.77615 66 7 0.59184 32 4 0.75000 61 4 0.77963 281 11 0.759781 119 10 0.830609 315 11 0.74583 31 3 0.73431 87 7 0.72811 145 11 0.80000 43 6 0.78700 71 4 0.67548 139 10 0.68426 61 4 0.96296 26 3 0.75340 60 6 0.80596 229 11 0.772283 200 11 0.76816 475 11 0.820639 86 7 0.784739 80 7 0.7909206 160 10 0.885859 58 7 0.7187500 25 0 0.721524 173 11 0.794494 316 11 0.85724 342 11 0.765252 387 11 0.76592 270 11 0.731710 351 11 0.81491 0.84073 0.64264 0.87909 0.66973 0.80199 0.71305 0.77927 0.85182 0.92264 0.85421 0.93584 0.886032 NA 0.83528 0.85211 0.86680 0.84559 0.77708 0.865245 0.87780 0.807560 0.85297 0.92126 0.89060 0.74205 0.88596 0.98065 0.80360 0.84930 0.798958 0.87334 0.817310 0.826486 0.8127676 0.862205 0.677801 0.882614 0.877692 0.93060 0.861380 0.83596 0.883678 1 0.79954 0.79310 -0.00693231 11 0.71778 0.72287 -0.0050959 9.1134e-01 0.7349487 insignificant 1.0000000 1 insignificant 0.97427952 0.5223373 insignificant 1.00000 1 insignificant -0.0214491 0.49063 insignificant 1 insignificant 0.79954 0.776632 0.00264446 10 0.71778 0.771286 -0.0535104 1.4580e-02 4.0120e-01 weaklyHypermeth 2.2091e-01 1.0000e+00 insignificant 7.5337e-01 1.9491e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.040375 2.5523e-01 insignificant 1.0000e+00 insignificant 0.79954 0.845646 -0.04513214 11 0.71778 0.783104 -0.0653283 9.9996e-01 0.01530968 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9869e-01 0.1370942 insignificant 1.0000e+00 1.0000 insignificant -0.0362254 2.5558e-01 insignificant 1.0000000 insignificant 0.79310 0.776632 0.0125232 10 0.72287 0.771286 -0.0484146 1.1394e-01 5.9782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0641e-01 4.1233e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0189255 5.8172e-01 insignificant 1.0000e+00 insignificant 0.79324 0.845738 -0.0375131 11 0.74267 0.798597 -0.0559302 9.9997e-01 0.1594627 insignificant 1.0000e+00 1 insignificant 9.9699e-01 0.764164 insignificant 1.0000e+00 1 insignificant -0.0147763 6.3087e-01 insignificant 1.00000000 insignificant 0.776632 0.845646 -0.047881 10 0.771286 0.783104 -0.0118179 9.6138e-01 9.6841e-03 weaklyHypometh 1.0000e+00 2.1052e-01 insignificant 6.4422e-01 2.6809e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0041493 9.0349e-01 insignificant 1.0000000 insignificant chr4 1306821 1307821 43571 MAEA ENSG00000090316 0.82214 237 9 0.65804 183 9 0.69534 113 6 0.80185 163 7 0.84281 101 9 0.76627 419 9 0.49630 94 6 0.83582 154 7 0.76647 103 5 0.81291 98 7 0.79635 305 9 0.52937 29 3 0.838891 176 9 0.55329 53 3 0.69630 116 4 0.75741 37 2 0.83704 57 4 0.77956 192 9 0.837832 174 8 0.820704 336 9 0.85766 67 5 0.72952 85 5 0.79129 217 9 0.71412 96 7 0.87163 42 3 0.79583 255 9 0.75476 51 4 0.75133 72 6 0.83206 134 7 0.69785 276 9 0.797026 246 9 0.78491 369 9 0.794942 181 9 0.709702 118 8 0.7827211 213 6 0.847222 27 3 0.7348779 137 6 0.771375 255 9 0.793573 174 9 0.83416 212 9 0.873843 173 8 0.75323 212 9 0.823926 166 9 0.83132 0.71579 0.73484 0.84124 0.88402 0.81261 0.64103 0.83285 0.78708 0.85296 0.84388 0.70875 0.843010 0.75352 0.81359 0.79589 0.90928 0.82146 0.83883 0.875856 0.92451 0.842614 0.83855 0.83680 0.91687 0.85400 0.72182 0.88535 0.84659 0.82555 0.839307 0.82169 0.835906 0.750952 0.8886340 0.884689 0.800190 0.814162 0.842377 0.86998 0.892403 0.82113 0.848758 2 0.80000 0.82670 -0.01134806 9 0.70609 0.73438 -0.0282977 6.7223e-01 0.2275638 insignificant 1.0000000 1 insignificant 0.39008963 0.0880168 insignificant 1.00000 1 insignificant -0.0342664 0.24733 insignificant 1 insignificant 0.80025 0.809882 0.00694759 9 0.78454 0.768580 0.0159605 1.1026e-01 3.8274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7675e-02 3.3400e-01 insignificant 9.7754e-01 1.0000e+00 insignificant -0.026239 4.1152e-01 insignificant 1.0000e+00 insignificant 0.80025 0.824973 -0.03125035 9 0.78454 0.817595 -0.0330553 9.8806e-01 0.03154358 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8274e-01 0.0164765 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0685124 4.5335e-02 weaklyHypometh 1.0000000 insignificant 0.82791 0.809882 0.0142829 9 0.78820 0.768580 0.0196247 2.1550e-03 8.8757e-02 weaklyHypermeth 3.9183e-02 1.0000e+00 weaklyHypermeth 1.0561e-02 1.6980e-01 weaklyHypermeth 2.3093e-01 1.0000e+00 insignificant 0.0080270 7.5567e-01 insignificant 1.0000e+00 insignificant 0.82791 0.824973 -0.0242449 9 0.78820 0.817595 -0.0293912 9.9281e-01 0.0084940 weaklyHypometh 1.0000e+00 1 insignificant 8.7771e-01 0.019857 weaklyHypometh 1.0000e+00 1 insignificant -0.0342460 2.1430e-01 insignificant 1.00000000 insignificant 0.809882 0.824973 -0.038293 9 0.768580 0.817595 -0.0490159 7.8421e-01 6.1326e-04 weaklyHypometh 1.0000e+00 1.7522e-02 weaklyHypometh 7.2960e-01 1.3756e-02 weaklyHypometh 1.00000000 3.4389e-01 insignificant -0.0422730 1.6846e-01 insignificant 1.0000000 insignificant chr4 1555377 1556377 43572 CRIPAK ENSG00000179979 0.89062 97 5 0.90444 136 5 0.94440 148 5 0.93220 59 1 0.85584 103 5 0.85419 123 4 0.82507 137 5 0.83697 155 5 0.92914 145 5 0.94731 112 5 0.93220 178 5 0.88830 168 5 0.921187 232 5 0.86364 44 1 0.95095 196 5 0.70952 143 5 0.83823 53 5 0.98250 98 4 0.943629 270 5 0.980328 98 5 0.89159 64 5 0.88000 38 1 0.99091 112 5 0.96011 76 5 0.98333 18 1 0.87891 145 5 0.87353 120 5 0.90325 107 5 0.89742 133 5 0.97210 130 5 0.936219 134 5 0.99231 99 5 0.931656 245 5 0.643967 174 5 0.7965272 333 5 1.000000 1 0 0.8683878 127 5 0.918074 100 5 0.902516 62 1 0.98276 87 5 0.837838 37 1 0.96552 68 1 0.739583 54 1 0.94648 0.89464 0.87392 0.92960 0.88675 0.88003 0.91585 0.82171 0.92876 0.94852 0.96766 0.88187 0.872583 0.86813 0.84644 0.90016 0.98360 0.92155 0.90497 0.911815 0.82457 0.893103 0.95925 0.94433 0.94023 0.91678 0.84656 0.98597 0.83861 0.94676 0.895681 0.96552 0.844893 0.515549 0.9581572 0.984077 0.824879 0.939692 0.937758 0.92271 0.843119 0.84542 0.928161 1 0.90019 0.91922 -0.01967342 5 0.89942 0.92416 -0.0247418 9.7357e-01 0.1214868 insignificant 1.0000000 1 insignificant 0.99674223 0.0409949 weaklyHypometh 1.00000 1 insignificant -0.0334378 0.10490 lowCoverage 1 lowCoverage 0.90019 0.817347 0.08172479 5 0.89942 0.814066 0.0853558 5.9833e-03 8.9681e-01 weaklyHypermeth 1.0316e-01 1.0000e+00 insignificant 6.3037e-01 7.2646e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.036766 5.1683e-01 lowCoverage 1.0000e+00 lowCoverage 0.90019 0.905844 -0.00867661 1 0.89942 0.942028 -0.0426057 8.6778e-01 0.01935479 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.7485e-01 0.0027397 lowCoverage 1.0000e+00 1.0000 lowCoverage 0.0108917 8.2568e-01 lowCoverage 1.0000000 lowCoverage 0.91922 0.817347 0.1015911 5 0.92416 0.814066 0.1100976 9.0783e-04 9.5823e-01 weaklyHypermeth 1.7458e-02 1.0000e+00 weaklyHypermeth 1.0384e-01 9.8611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0702034 2.3627e-01 lowCoverage 1.0000e+00 lowCoverage 0.91922 0.905844 0.0096096 1 0.92416 0.942028 -0.0178638 8.1023e-01 0.0169368 lowCoverage 1.0000e+00 1 lowCoverage 9.1423e-01 0.045791 lowCoverage 1.0000e+00 1 lowCoverage 0.0443295 3.8723e-01 lowCoverage 1.00000000 lowCoverage 0.817347 0.905844 -0.088475 1 0.814066 0.942028 -0.1279614 9.9833e-01 1.9070e-03 lowCoverage 1.0000e+00 5.1539e-02 lowCoverage 9.9381e-01 9.0798e-03 lowCoverage 1.00000000 2.3281e-01 lowCoverage -0.0258739 7.1214e-01 lowCoverage 1.0000000 lowCoverage chr4 2423209 2424209 43577 ENSG00000206113 0.72899 139 6 0.69254 137 7 0.70130 132 5 0.77077 128 4 0.59392 103 6 0.82999 173 5 0.88625 90 5 0.79582 146 7 0.86078 122 5 0.80221 93 5 0.77380 203 7 0.64933 95 5 0.858217 155 7 0.86495 56 2 0.81944 124 5 0.94113 63 5 0.87541 67 5 0.72529 223 5 0.773204 242 7 0.888170 143 6 0.92937 70 3 0.48958 71 4 0.85659 74 6 0.85000 59 3 0.88357 164 4 0.90976 240 7 0.56151 95 5 0.58824 53 3 0.85523 174 7 0.87839 227 7 0.869267 200 7 0.86953 151 7 0.439403 176 7 0.531300 197 7 0.7500000 56 2 0.563636 22 2 0.5560298 100 5 0.635370 220 7 0.667253 102 2 0.82259 139 6 0.627500 97 4 0.72949 99 4 0.622239 117 4 0.75862 0.71690 0.76241 0.79751 0.83006 0.86145 0.81818 0.71835 0.76154 0.80777 0.84822 0.78876 0.701355 0.85149 0.83390 0.94103 0.89617 0.81809 0.79819 0.866351 0.80643 0.639982 0.87006 0.99909 0.86994 0.90480 0.73635 0.95888 0.84279 0.79151 0.795931 0.94304 0.337906 0.606266 0.9083481 0.847402 0.656290 0.558918 0.805499 0.81359 0.745763 0.76136 0.737988 2 0.82915 0.86439 -0.03858982 7 0.84369 0.76049 0.0831917 9.9958e-01 0.0616880 insignificant 1.0000000 1 insignificant 0.99190627 0.0924160 insignificant 1.00000 1 insignificant -0.0035111 0.94323 insignificant 1 insignificant 0.82915 0.566796 0.26378283 7 0.84369 0.488248 0.3554387 3.4032e-14 1.0000e+00 hypermethylated 1.6206e-12 1.0000e+00 hypermethylated 9.2751e-05 1.0000e+00 hypermethylated 3.0905e-03 1.0000e+00 hypermethylated 0.212285 2.5158e-03 weaklyHypermeth 8.1154e-02 weaklyHypermeth 0.82814 0.740072 0.06875317 4 0.71869 0.632367 0.0863193 8.9973e-03 0.97915190 lowCoverage 2.8117e-01 1.00000 lowCoverage 1.1115e-01 0.6783203 lowCoverage 1.0000e+00 1.0000 lowCoverage 0.0977621 5.7683e-02 lowCoverage 1.0000000 lowCoverage 0.86493 0.567532 0.3055971 7 0.86914 0.557998 0.3111394 1.3459e-13 1.0000e+00 hypermethylated 7.4774e-12 1.0000e+00 hypermethylated 7.1755e-05 1.0000e+00 hypermethylated 2.9898e-03 1.0000e+00 hypermethylated 0.2157961 3.4606e-03 weaklyHypermeth 1.0487e-01 insignificant 0.86493 0.741410 0.1139509 4 0.86914 0.722705 0.1464315 4.4659e-05 0.9988154 lowCoverage 2.3505e-03 1 lowCoverage 9.6304e-03 0.970022 lowCoverage 4.3774e-01 1 lowCoverage 0.1012731 1.0340e-01 lowCoverage 1.00000000 lowCoverage 0.567532 0.741410 -0.187288 4 0.557998 0.722705 -0.1647079 9.8258e-01 2.4248e-04 lowCoverage 1.0000e+00 8.3615e-03 lowCoverage 9.6646e-01 1.7045e-02 lowCoverage 1.00000000 4.0584e-01 lowCoverage -0.1145230 7.4935e-02 lowCoverage 1.0000000 lowCoverage chr4 3432865 3433865 43582 HGFAC ENSG00000109758 0.79853 242 6 0.73726 126 7 0.87632 149 6 0.81802 274 6 0.74924 84 6 0.82195 236 6 0.85670 171 8 0.86041 185 7 0.75573 198 6 0.86544 203 6 0.86514 173 8 0.94008 148 6 0.777951 219 6 0.86170 139 5 0.68147 243 6 0.81540 195 6 0.74520 50 6 0.68082 228 6 0.846398 149 6 0.772993 238 6 0.86920 95 8 0.74413 177 6 0.94966 174 6 0.70403 152 6 0.93330 136 6 0.88899 159 8 0.60544 149 6 0.85267 132 6 0.85119 110 5 0.86830 151 8 0.716516 144 8 0.83455 265 6 0.622409 153 8 0.332743 106 6 1.0000000 110 5 0.752968 95 5 0.5405792 156 8 0.874572 134 8 0.638140 255 6 0.76580 232 6 0.728309 207 6 0.82360 256 6 0.577024 224 6 0.92679 0.81696 0.87245 0.83544 0.78204 0.84599 0.90570 0.86356 0.84190 0.84216 0.91582 0.91179 0.816139 0.83734 0.89237 0.94663 0.75656 0.78060 0.84887 0.858368 0.85659 0.722473 0.94541 0.84401 0.87193 0.88121 0.77727 0.92168 0.83100 0.86071 0.901010 0.90619 0.615384 0.204699 0.9788306 0.567524 0.738366 0.873843 0.610582 0.69014 0.783499 0.81082 0.554516 6 0.85945 0.85909 -0.00401230 6 0.66964 0.72458 -0.0549375 6.2701e-01 0.3340094 insignificant 1.0000000 1 insignificant 0.79188057 0.2756701 insignificant 1.00000 1 insignificant -0.0118273 0.72822 insignificant 1 insignificant 0.85945 0.669323 0.18764979 6 0.66964 0.547467 0.1221739 2.9553e-05 9.7556e-01 weaklyHypermeth 6.4246e-04 1.0000e+00 weaklyHypermeth 1.1194e-01 9.8567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.119125 2.8148e-01 insignificant 1.0000e+00 insignificant 0.86126 0.693356 0.16989663 6 0.84040 0.691095 0.1493040 8.1159e-13 0.99999909 weaklyHypermeth 6.7633e-11 1.00000 weaklyHypermeth 1.3171e-07 0.9999740 weaklyHypermeth 1.4634e-05 1.0000 weaklyHypermeth 0.0997620 8.6272e-02 insignificant 1.0000000 insignificant 0.85877 0.668435 0.1907114 6 0.71975 0.501844 0.2179076 9.9985e-03 9.9999e-01 weaklyHypermeth 1.6664e-01 1.0000e+00 insignificant 2.4601e-01 9.9998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1309520 2.4909e-01 insignificant 1.0000e+00 insignificant 0.86182 0.693356 0.1762139 6 0.87129 0.691095 0.1802002 1.2175e-09 1.0000000 weaklyHypermeth 1.1068e-07 1 weaklyHypermeth 1.3241e-06 1.000000 weaklyHypermeth 1.3241e-04 1 weaklyHypermeth 0.1115893 7.0406e-02 insignificant 1.00000000 insignificant 0.673797 0.693356 -0.012748 6 0.752767 0.691095 0.0616721 3.0786e-01 8.9631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3590e-01 9.8252e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0193627 8.6237e-01 insignificant 1.0000000 insignificant chr4 4782766 4783766 43626 STX18 ENSG00000168818 0.93286 88 5 0.93175 309 5 0.87881 101 5 0.90218 113 5 0.90976 120 5 0.89780 244 5 0.94201 131 5 0.91341 197 5 0.86777 144 5 0.94868 82 5 0.90211 214 5 0.76000 25 5 0.860357 136 5 0.92665 91 5 0.89208 196 5 0.87556 31 3 NA 0 0 0.48792 130 2 0.915278 140 5 0.927781 133 5 0.79860 36 2 0.80737 72 5 0.91796 81 5 0.78750 49 5 0.73846 37 2 0.93969 333 5 0.83994 151 5 0.78074 79 5 0.79791 124 2 0.91384 385 5 0.914681 306 5 0.93680 224 5 0.118506 133 5 0.020000 49 2 0.1627907 252 2 0.200000 9 0 0.1201311 168 5 0.773076 261 5 0.890809 101 5 0.80119 67 5 0.782069 73 5 0.98400 56 2 0.733613 89 5 0.93077 0.90439 0.85740 0.84751 0.89483 0.88660 0.91896 0.85695 0.80045 0.93732 0.88366 0.78107 0.860056 0.89264 0.86350 0.94109 NA 0.54545 0.88571 0.923503 0.64174 0.775633 0.88956 0.76627 0.72781 0.94326 0.72965 0.73904 0.77304 0.91471 0.927514 0.92535 0.123021 0.038462 0.1856529 0.366864 0.118699 0.738854 0.804995 0.80826 0.718915 0.97136 0.710482 2 0.87729 0.87373 0.00403423 5 0.89204 0.88596 0.0060840 4.8597e-01 0.8043384 insignificant 1.0000000 1 insignificant 0.21642082 0.7749280 insignificant 1.00000 1 insignificant 0.0297211 0.35303 lowCoverage 1 lowCoverage 0.87729 0.324541 0.52946510 5 0.89204 0.401970 0.4900750 1.3882e-23 1.0000e+00 hypermethylated 8.6760e-22 1.0000e+00 hypermethylated 5.6756e-12 1.0000e+00 hypermethylated 9.4594e-10 1.0000e+00 hypermethylated 0.645096 1.7472e-03 lowCoverage 5.8239e-02 lowCoverage 0.87729 0.790155 0.07098433 5 0.89204 0.834796 0.0572487 1.5201e-02 0.99044466 weaklyHypermeth 4.4707e-01 1.00000 insignificant 6.9023e-02 0.9523575 insignificant 1.0000e+00 1.0000 insignificant 0.0391768 4.6396e-01 lowCoverage 1.0000000 lowCoverage 0.87373 0.324541 0.5316910 5 0.88596 0.401970 0.4839910 6.9170e-15 1.0000e+00 hypermethylated 4.0688e-13 1.0000e+00 hypermethylated 1.0432e-09 1.0000e+00 hypermethylated 1.3040e-07 1.0000e+00 hypermethylated 0.6153748 2.2754e-03 lowCoverage 8.1023e-02 lowCoverage 0.87373 0.790155 0.0682745 5 0.88596 0.834796 0.0511647 6.3479e-02 0.9386454 insignificant 1.0000e+00 1 insignificant 5.0352e-01 0.772632 insignificant 1.0000e+00 1 insignificant 0.0094557 8.5363e-01 lowCoverage 1.00000000 lowCoverage 0.324541 0.790155 -0.477997 5 0.401970 0.834796 -0.4328264 1.0000e+00 1.4815e-06 hypomethylated 1.0000e+00 7.7973e-05 hypomethylated 1.0000e+00 3.9537e-06 hypomethylated 1.00000000 5.1775e-04 hypomethylated -0.6059191 1.7827e-03 lowCoverage 0.0775068 lowCoverage chr4 4870413 4871413 43635 STX18 ENSG00000168818 0.63504 231 7 0.67974 216 7 0.61367 275 7 0.79778 197 7 0.69759 160 7 0.76408 276 7 0.78056 125 7 0.74802 198 7 0.81271 119 7 0.76810 194 7 0.72505 258 7 0.78988 111 7 0.701501 247 7 0.70279 129 7 0.76143 352 7 0.95918 25 3 0.71429 11 0 0.59099 232 7 0.738480 355 7 0.726615 134 7 0.80918 82 7 0.61057 185 7 0.79298 148 7 0.82089 142 7 0.84048 96 7 0.74728 270 7 0.77243 305 7 0.75113 92 7 0.67534 202 7 0.80508 345 7 0.743542 236 7 0.75736 196 7 0.116137 250 7 0.273913 151 7 0.1726798 176 7 0.112245 69 7 0.1711800 199 7 0.308086 381 7 0.497562 258 7 0.54299 215 7 0.436349 174 7 0.51100 218 7 0.593016 182 7 0.64026 0.67986 0.60642 0.80529 0.68036 0.78139 0.78866 0.75300 0.81839 0.77269 0.72931 0.79679 0.696143 0.71791 0.76124 0.96756 0.70290 0.59234 0.74496 0.732280 0.82971 0.607179 0.79542 0.82894 0.83527 0.74577 0.77283 0.73705 0.66519 0.80079 0.736977 0.76956 0.106689 0.258684 0.1517272 0.085059 0.159608 0.254430 0.483817 0.52454 0.432934 0.50020 0.581179 7 0.72198 0.75598 -0.03412180 7 0.72111 0.75665 -0.0355361 9.9353e-01 0.0124626 weaklyHypometh 1.0000000 1 insignificant 0.95861994 0.0688184 insignificant 1.00000 1 insignificant -0.0251487 0.33825 insignificant 1 insignificant 0.72198 0.220228 0.51436946 7 0.72111 0.216491 0.5046230 2.9736e-51 1.0000e+00 hypermethylated 5.9472e-49 1.0000e+00 hypermethylated 3.7877e-15 1.0000e+00 hypermethylated 7.5754e-13 1.0000e+00 hypermethylated 0.543000 4.5707e-07 hypermethylated 3.0471e-05 hypermethylated 0.72198 0.523400 0.20588967 7 0.72111 0.520674 0.2004394 1.0476e-17 0.99963345 hypermethylated 2.0951e-15 1.00000 hypermethylated 2.5241e-10 0.9999337 hypermethylated 4.2068e-08 1.0000 hypermethylated 0.2191910 9.5513e-05 hypermethylated 0.0132490 hypermethylated 0.75598 0.220228 0.5471501 7 0.75665 0.216491 0.5401591 2.1571e-39 1.0000e+00 hypermethylated 5.3928e-37 1.0000e+00 hypermethylated 1.8295e-13 1.0000e+00 hypermethylated 3.6589e-11 1.0000e+00 hypermethylated 0.5681489 2.8675e-07 hypermethylated 2.2058e-05 hypermethylated 0.75598 0.523400 0.2390154 7 0.75665 0.520674 0.2359755 1.8628e-16 1.0000000 hypermethylated 4.6570e-14 1 hypermethylated 1.3613e-10 1.000000 hypermethylated 3.4033e-08 1 hypermethylated 0.2443397 4.5093e-05 hypermethylated 0.00901865 hypermethylated 0.220228 0.523400 -0.302810 7 0.216491 0.520674 -0.3041836 1.0000e+00 9.4797e-18 hypomethylated 1.0000e+00 1.8959e-15 hypomethylated 1.0000e+00 8.4579e-08 hypomethylated 1.00000000 1.6916e-05 hypomethylated -0.3238092 3.3472e-05 hypomethylated 0.0055812 hypomethylated chr4 4870620 4871620 43636 STX18 ENSG00000168818 0.63504 231 7 0.67974 216 7 0.61367 275 7 0.79778 197 7 0.69759 160 7 0.76408 276 7 0.78056 125 7 0.74802 198 7 0.81271 119 7 0.76810 194 7 0.72505 258 7 0.78988 111 7 0.701501 247 7 0.70279 129 7 0.76143 352 7 0.95918 25 3 0.71429 11 0 0.59099 232 7 0.738480 355 7 0.726615 134 7 0.80918 82 7 0.61057 185 7 0.79298 148 7 0.82089 142 7 0.84048 96 7 0.74728 270 7 0.77243 305 7 0.75113 92 7 0.67534 202 7 0.80508 345 7 0.743542 236 7 0.75736 196 7 0.116137 250 7 0.273913 151 7 0.1726798 176 7 0.112245 69 7 0.1711800 199 7 0.308086 381 7 0.497562 258 7 0.54299 215 7 0.436349 174 7 0.51100 218 7 0.593016 182 7 0.64026 0.67986 0.60642 0.80529 0.68036 0.78139 0.78866 0.75300 0.81839 0.77269 0.72931 0.79679 0.696143 0.71791 0.76124 0.96756 0.70290 0.59234 0.74496 0.732280 0.82971 0.607179 0.79542 0.82894 0.83527 0.74577 0.77283 0.73705 0.66519 0.80079 0.736977 0.76956 0.106689 0.258684 0.1517272 0.085059 0.159608 0.254430 0.483817 0.52454 0.432934 0.50020 0.581179 7 0.72198 0.75598 -0.03412180 7 0.72111 0.75665 -0.0355361 9.9353e-01 0.0124626 weaklyHypometh 1.0000000 1 insignificant 0.95861994 0.0688184 insignificant 1.00000 1 insignificant -0.0251487 0.33825 insignificant 1 insignificant 0.72198 0.220228 0.51436946 7 0.72111 0.216491 0.5046230 2.9736e-51 1.0000e+00 hypermethylated 5.9472e-49 1.0000e+00 hypermethylated 3.7877e-15 1.0000e+00 hypermethylated 7.5754e-13 1.0000e+00 hypermethylated 0.543000 4.5707e-07 hypermethylated 3.0471e-05 hypermethylated 0.72198 0.523400 0.20588967 7 0.72111 0.520674 0.2004394 1.0476e-17 0.99963345 hypermethylated 2.0951e-15 1.00000 hypermethylated 2.5241e-10 0.9999337 hypermethylated 4.2068e-08 1.0000 hypermethylated 0.2191910 9.5513e-05 hypermethylated 0.0132490 hypermethylated 0.75598 0.220228 0.5471501 7 0.75665 0.216491 0.5401591 2.1571e-39 1.0000e+00 hypermethylated 5.3928e-37 1.0000e+00 hypermethylated 1.8295e-13 1.0000e+00 hypermethylated 3.6589e-11 1.0000e+00 hypermethylated 0.5681489 2.8675e-07 hypermethylated 2.2058e-05 hypermethylated 0.75598 0.523400 0.2390154 7 0.75665 0.520674 0.2359755 1.8628e-16 1.0000000 hypermethylated 4.6570e-14 1 hypermethylated 1.3613e-10 1.000000 hypermethylated 3.4033e-08 1 hypermethylated 0.2443397 4.5093e-05 hypermethylated 0.00901865 hypermethylated 0.220228 0.523400 -0.302810 7 0.216491 0.520674 -0.3041836 1.0000e+00 9.4797e-18 hypomethylated 1.0000e+00 1.8959e-15 hypomethylated 1.0000e+00 8.4579e-08 hypomethylated 1.00000000 1.6916e-05 hypomethylated -0.3238092 3.3472e-05 hypomethylated 0.0055812 hypomethylated chr4 8209504 8210504 43654 MIR95 ENSG00000207807 0.50528 166 6 0.47076 159 6 0.64204 95 6 0.64904 161 6 0.52179 85 6 0.63151 262 6 0.44903 92 4 0.59348 124 6 0.59748 188 6 0.63888 175 6 0.62306 154 6 0.49958 139 6 0.518371 178 6 0.56743 123 6 0.55644 129 6 0.31700 113 6 0.30208 33 3 0.33443 193 6 0.614196 146 6 0.485508 209 6 0.72533 73 6 0.32215 160 6 0.46422 126 6 0.67972 86 5 0.69180 81 6 0.45652 158 6 0.46131 172 6 0.49501 79 6 0.51765 139 6 0.59611 181 6 0.672192 177 6 0.72263 203 6 0.326957 165 6 0.312500 78 6 0.6666667 21 2 0.364545 44 3 0.2757215 200 6 0.562958 162 6 0.720405 158 6 0.57304 175 6 0.628817 115 6 0.51231 166 6 0.571292 192 6 0.53473 0.42820 0.64954 0.59837 0.40163 0.60117 0.39777 0.53727 0.54234 0.56035 0.56166 0.44756 0.433563 0.48964 0.47000 0.27739 0.36979 0.47852 0.51607 0.495233 0.73020 0.296076 0.56304 0.56104 0.63289 0.45380 0.51910 0.35925 0.46810 0.53148 0.455599 0.62355 0.269424 0.321049 0.3718790 0.508186 0.229656 0.342507 0.650998 0.51245 0.538208 0.46321 0.557323 5 0.50958 0.52844 -0.01022097 6 0.36300 0.51402 -0.1510241 9.6381e-01 0.4663605 insignificant 1.0000000 1 insignificant 0.99535351 0.4128826 insignificant 1.00000 1 insignificant -0.0411848 0.37245 insignificant 1 insignificant 0.51029 0.355755 0.18669484 6 0.48200 0.396392 0.0856041 2.1153e-07 9.9988e-01 weaklyHypermeth 5.8757e-06 1.0000e+00 weaklyHypermeth 3.4891e-03 9.9522e-01 weaklyHypermeth 8.3073e-02 1.0000e+00 weaklyHypermeth 0.107645 1.6644e-01 lowCoverage 1.0000e+00 lowCoverage 0.51046 0.522333 -0.04735042 6 0.55085 0.646717 -0.0958647 8.4305e-01 0.18349965 insignificant 1.0000e+00 1.00000 insignificant 9.2393e-01 0.1779448 insignificant 1.0000e+00 1.0000 insignificant -0.0753038 1.1377e-01 insignificant 1.0000000 insignificant 0.52908 0.356287 0.1956008 6 0.55737 0.453019 0.1043508 3.0822e-06 9.9716e-01 weaklyHypermeth 8.3303e-05 1.0000e+00 weaklyHypermeth 1.1653e-03 9.9311e-01 weaklyHypermeth 3.2370e-02 1.0000e+00 weaklyHypermeth 0.1488297 8.0027e-02 lowCoverage 1.0000e+00 lowCoverage 0.52908 0.522333 -0.0379899 6 0.55737 0.646717 -0.0893472 8.9891e-01 0.3145030 insignificant 1.0000e+00 1 insignificant 9.7523e-01 0.423777 insignificant 1.0000e+00 1 insignificant -0.0341190 5.2132e-01 insignificant 1.00000000 insignificant 0.356287 0.522333 -0.230833 6 0.453019 0.646717 -0.1936980 1.0000e+00 1.7397e-07 hypomethylated 1.0000e+00 1.1598e-05 hypomethylated 9.9995e-01 5.1684e-03 weaklyHypometh 1.00000000 1.6151e-01 insignificant -0.1829487 3.9310e-02 lowCoverage 0.8545552 lowCoverage chr4 8752425 8753425 43657 CPZ ENSG00000109625 0.86286 67 4 0.73937 158 9 0.87808 114 5 0.93420 66 5 0.85336 90 6 0.92529 114 5 0.81005 113 9 0.90967 123 6 0.73745 84 5 0.91579 94 5 0.89739 145 6 0.92406 91 5 0.762910 96 5 0.91949 58 3 0.85071 80 5 0.97952 55 4 0.52955 40 2 0.53341 49 1 0.930404 120 10 0.817959 94 3 0.82955 68 7 0.68974 26 3 0.68074 54 5 0.82937 77 5 0.84908 52 4 0.79911 118 8 0.87167 33 2 0.94815 43 3 0.97279 69 5 0.72816 114 5 0.919697 102 9 0.89285 126 9 0.090909 169 8 0.000000 45 3 0.1250000 95 7 0.055556 81 5 0.0014493 156 5 0.035088 161 10 0.529412 21 1 0.50000 26 2 0.953125 27 1 0.86667 26 1 0.629167 36 3 0.80981 0.68579 0.74268 0.80982 0.68421 0.90179 0.82162 0.86377 0.75339 0.79278 0.88665 0.96779 0.748477 0.88838 0.90956 0.99459 0.57099 0.44941 0.94843 0.851658 0.97727 0.580933 0.91991 0.77489 0.67631 0.81794 0.69949 0.84242 0.98217 0.84600 0.857071 0.84543 0.000000 0.000000 0.0000000 0.000000 0.011419 0.000000 0.512195 0.61212 0.704545 0.66465 0.476515 1 0.84128 0.85358 -0.01449450 5 0.77230 0.82286 -0.0505551 6.6110e-01 0.6090840 insignificant 1.0000000 1 insignificant 0.91832651 0.6504032 insignificant 1.00000 1 insignificant 0.0013335 0.97310 insignificant 1 insignificant 0.84165 0.049505 0.83088611 5 0.76794 0.084232 0.6837109 4.8291e-102 1.0000e+00 hypermethylated 2.4146e-99 1.0000e+00 hypermethylated 5.8295e-21 1.0000e+00 hypermethylated 1.9432e-18 1.0000e+00 hypermethylated 0.784242 1.6668e-16 hypermethylated 4.1670e-14 hypermethylated 0.84452 0.683824 0.15446899 1 0.85617 0.676587 0.1795826 7.3747e-06 0.97108904 lowCoverage 3.3522e-04 1.00000 lowCoverage 1.2950e-01 0.8707365 lowCoverage 1.0000e+00 1.0000 lowCoverage 0.1399013 2.0437e-01 lowCoverage 1.0000000 lowCoverage 0.85324 0.049575 0.8373375 5 0.79560 0.090712 0.7048933 3.6740e-63 1.0000e+00 hypermethylated 1.8370e-60 1.0000e+00 hypermethylated 3.6150e-18 1.0000e+00 hypermethylated 1.2050e-15 1.0000e+00 hypermethylated 0.7829083 1.4657e-13 hypermethylated 1.4657e-10 hypermethylated 0.85405 0.683824 0.1598267 1 0.84935 0.676587 0.1727639 1.8543e-03 0.9739422 lowCoverage 7.4170e-02 1 lowCoverage 2.0723e-01 0.944756 lowCoverage 1.0000e+00 1 lowCoverage 0.1385678 2.0811e-01 lowCoverage 1.00000000 lowCoverage 0.048364 0.683824 -0.671114 1 0.061750 0.676587 -0.6148373 1.0000e+00 1.4870e-23 lowCoverage 1.0000e+00 4.9565e-21 lowCoverage 1.0000e+00 5.9291e-09 lowCoverage 1.00000000 1.9764e-06 lowCoverage -0.6443404 1.6133e-03 lowCoverage 0.0733339 lowCoverage chr4 8777544 8778544 43658 CPZ ENSG00000109625 0.74102 472 17 0.65781 408 17 0.75821 386 18 0.77163 438 14 0.67474 264 15 0.80317 688 17 0.70219 325 18 0.63399 405 18 0.65046 391 18 0.79927 416 17 0.77729 565 18 0.58476 295 18 0.793988 469 18 0.66865 116 8 0.73399 448 18 0.67903 218 12 0.69843 204 13 0.58871 649 15 0.808103 383 17 0.738528 532 17 0.82598 258 15 0.63665 317 14 0.73647 502 17 0.55623 236 14 0.79792 199 13 0.80169 487 17 0.77861 396 17 0.63038 155 16 0.72202 348 17 0.72890 590 18 0.759155 503 17 0.89284 642 17 0.095496 612 17 0.031960 455 17 0.0697966 441 10 0.057500 166 13 0.1051197 459 18 0.035330 668 17 0.734161 637 17 0.65552 542 17 0.717319 437 14 0.47550 507 16 0.570422 498 15 0.78581 0.63994 0.77704 0.76844 0.70146 0.78343 0.75384 0.74261 0.71015 0.82694 0.79998 0.62097 0.804539 0.74929 0.76523 0.63433 0.68640 0.60259 0.82929 0.802416 0.79870 0.631858 0.75493 0.72512 0.81061 0.79827 0.77130 0.73112 0.73287 0.77930 0.786478 0.87379 0.042109 0.018590 0.0094028 0.064884 0.071030 0.048224 0.704009 0.62773 0.655015 0.45992 0.597835 13 0.72861 0.77879 -0.02949957 17 0.65365 0.64281 0.0108456 9.9991e-01 0.0136511 weaklyHypometh 1.0000000 1 insignificant 0.99418476 0.3447339 insignificant 1.00000 1 insignificant -0.0257061 0.42123 insignificant 1 insignificant 0.72874 0.032845 0.71117309 17 0.66531 0.121046 0.5442615 2.8957e-175 1.0000e+00 hypermethylated 2.8957e-172 1.0000e+00 hypermethylated 6.2566e-38 1.0000e+00 hypermethylated 6.2566e-35 1.0000e+00 hypermethylated 0.647331 6.7451e-19 hypermethylated 4.3189e-16 hypermethylated 0.72936 0.683969 0.11098341 16 0.75254 0.630173 0.1223628 1.8873e-08 0.93200643 weaklyHypermeth 1.2582e-06 1.00000 weaklyHypermeth 3.1335e-06 0.9994740 weaklyHypermeth 2.2382e-04 1.0000 weaklyHypermeth 0.0826142 1.6572e-01 insignificant 1.0000000 insignificant 0.77891 0.032189 0.7367194 17 0.64930 0.094171 0.5551285 4.3795e-142 1.0000e+00 hypermethylated 4.3795e-139 1.0000e+00 hypermethylated 3.9692e-32 1.0000e+00 hypermethylated 3.9692e-29 1.0000e+00 hypermethylated 0.6730371 8.2164e-13 hypermethylated 4.1082e-10 hypermethylated 0.78067 0.683728 0.1422853 16 0.72551 0.610708 0.1147969 1.2671e-12 0.9998862 weaklyHypermeth 2.1119e-10 1 weaklyHypermeth 1.1140e-08 0.999757 weaklyHypermeth 1.8566e-06 1 weaklyHypermeth 0.1083202 9.3068e-02 insignificant 1.00000000 insignificant 0.031541 0.683969 -0.591832 16 0.058589 0.630173 -0.5715843 1.0000e+00 3.9058e-68 hypomethylated 1.0000e+00 3.9058e-65 hypomethylated 1.0000e+00 3.8404e-22 hypomethylated 1.00000000 3.8404e-19 hypomethylated -0.5647169 1.7044e-04 hypomethylated 0.0113627 hypomethylated chr4 9314043 9315043 43672 ENSG00000186234 0.59860 334 7 0.61756 305 9 0.37683 93 7 0.61917 322 9 0.45170 64 6 0.57917 304 7 0.40235 163 8 0.48293 189 9 0.69546 95 7 0.68561 106 7 0.72354 273 9 0.65000 26 3 0.453758 124 6 0.52698 26 2 0.36271 116 7 0.75000 10 0 0.66667 3 0 0.45292 450 7 0.685695 233 7 0.381591 360 9 0.62417 69 7 0.70833 89 7 0.51557 109 9 0.32283 87 8 0.56200 536 9 0.54473 420 9 0.68617 121 7 0.38333 39 4 0.55224 290 9 0.63805 420 9 0.573763 366 9 0.63165 288 9 0.384591 266 9 0.259933 242 7 0.4709766 282 4 0.516837 550 9 0.4830286 202 9 0.565322 486 9 0.641966 340 9 0.49950 338 9 0.452229 348 9 0.76153 277 7 0.546412 316 9 0.68605 0.75920 0.44909 0.71121 0.49744 0.62141 0.59930 0.64838 0.77886 0.72274 0.83184 0.83974 0.619780 0.54511 0.65005 0.68569 NA 0.63151 0.66708 0.589163 0.56954 0.796626 0.54639 0.33735 0.78863 0.83262 0.70775 0.63556 0.73548 0.78734 0.780411 0.76255 0.459870 0.305624 0.5942705 0.635037 0.664159 0.719570 0.715109 0.77715 0.531201 0.75154 0.630221 1 0.67399 0.77064 -0.07713288 7 0.41094 0.43989 -0.0289526 9.9836e-01 0.0038584 weaklyHypometh 1.0000000 1 insignificant 0.99991470 0.2031746 insignificant 1.00000 1 insignificant -0.0037417 0.93234 insignificant 1 insignificant 0.67713 0.553254 0.11650520 7 0.55277 0.417814 0.1349568 1.6375e-06 9.9985e-01 weaklyHypermeth 4.0936e-05 1.0000e+00 weaklyHypermeth 9.8255e-03 9.9951e-01 weaklyHypermeth 2.0470e-01 1.0000e+00 insignificant 0.111381 6.3167e-02 insignificant 1.0000e+00 insignificant 0.67675 0.642372 -0.02472374 7 0.46064 0.444204 0.0164386 8.9457e-01 0.28889639 insignificant 1.0000e+00 1.00000 insignificant 9.9319e-01 0.1284134 insignificant 1.0000e+00 1.0000 insignificant -0.0221671 7.3267e-01 insignificant 1.0000000 insignificant 0.77560 0.553254 0.1900354 9 0.62234 0.417814 0.2045221 1.2576e-09 1.0000e+00 weaklyHypermeth 5.0304e-08 1.0000e+00 weaklyHypermeth 4.5350e-05 9.9993e-01 weaklyHypermeth 2.0614e-03 1.0000e+00 weaklyHypermeth 0.1151224 6.3167e-02 insignificant 1.0000e+00 insignificant 0.77450 0.642372 0.0458709 9 0.51861 0.444204 0.0744097 2.1526e-01 0.8595246 insignificant 1.0000e+00 1 insignificant 4.5869e-01 0.697351 insignificant 1.0000e+00 1 insignificant -0.0184254 7.8235e-01 insignificant 1.00000000 insignificant 0.553254 0.643166 -0.132339 9 0.417814 0.533044 -0.1152305 9.9998e-01 9.4943e-05 weaklyHypometh 1.0000e+00 3.6517e-03 weaklyHypometh 1.0000e+00 2.8454e-04 weaklyHypometh 1.00000000 1.4227e-02 weaklyHypometh -0.1335477 9.5597e-02 insignificant 1.0000000 insignificant chr4 12494845 12495845 43781 ENSG00000221794 0.85675 201 5 0.69513 137 3 0.91667 12 0 0.82430 180 5 0.87798 40 3 0.81111 101 3 0.89062 49 3 0.88095 42 3 0.86667 15 3 0.95455 35 3 0.88703 115 3 1.00000 13 1 0.950549 40 3 0.95833 24 3 0.95238 20 3 1.00000 6 0 1.00000 6 0 0.73348 66 5 NA 0 0 0.516667 38 3 0.86667 29 3 0.81818 33 3 0.73333 38 3 1.00000 2 0 0.75946 84 3 0.94725 130 3 0.94881 43 3 1.00000 9 0 NA 0 0 0.76726 117 3 0.953483 175 3 0.94335 100 5 0.945831 92 3 0.840523 49 3 NA 0 0 0.895833 50 3 0.7598684 51 3 0.701548 93 5 0.614328 247 5 0.56762 252 5 0.657269 468 5 0.90684 42 2 0.622763 446 5 0.90323 0.92685 0.91667 0.91229 0.83730 0.85185 0.85417 0.88095 0.86667 0.93939 0.84937 1.00000 0.950549 0.95833 0.95238 1.00000 1.00000 0.90236 NA 0.861111 0.86667 0.818182 0.88889 0.96079 0.75946 0.91208 0.93175 1.00000 NA 0.94543 0.906966 0.90558 0.945831 0.840523 NA 0.895833 0.759868 0.957126 0.749780 0.72381 0.744734 1.00000 0.678899 0 0.85362 0.88947 -0.00514875 3 0.84623 0.88835 -0.0421235 8.9917e-01 0.5938060 lowCoverage 1.0000000 1 lowCoverage 0.88199437 0.4236578 lowCoverage 1.00000 1 lowCoverage -0.0129822 0.75369 lowCoverage 1 lowCoverage 0.85297 0.856716 0.02939266 3 0.81547 0.664238 0.1512347 9.6743e-02 8.6239e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.1480e-01 9.8697e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.043551 4.3029e-01 lowCoverage 1.0000e+00 lowCoverage 0.85297 0.664605 0.17641811 5 0.81547 0.636643 0.1788297 1.1325e-14 0.99999995 weaklyHypermeth 1.4156e-12 1.00000 weaklyHypermeth 1.3718e-03 0.9994470 weaklyHypermeth 6.8589e-02 1.0000 weaklyHypermeth 0.1985076 2.4764e-02 lowCoverage 1.0000000 lowCoverage 0.88918 0.856716 0.0246081 3 0.86602 0.664238 0.2017829 2.5720e-01 8.3858e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3213e-01 9.7327e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0565333 3.2272e-01 lowCoverage 1.0000e+00 lowCoverage 0.88918 0.664605 0.1781673 3 0.86602 0.636643 0.2293779 2.1737e-10 1.0000000 lowCoverage 2.1737e-08 1 lowCoverage 5.9728e-04 0.999999 lowCoverage 3.1436e-02 1 lowCoverage 0.2114898 1.9311e-02 lowCoverage 1.00000000 lowCoverage 0.856716 0.664605 0.150144 3 0.664238 0.636643 0.0275949 5.0636e-05 5.7187e-01 lowCoverage 5.0636e-03 1.0000e+00 lowCoverage 1.2601e-01 8.5776e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1549565 7.4405e-02 lowCoverage 1.0000000 lowCoverage chr4 12495004 12496004 43782 ENSG00000221794 0.85675 201 5 0.69513 137 3 0.91667 12 0 0.82430 180 5 0.87798 40 3 0.81111 101 3 0.89062 49 3 0.88095 42 3 0.86667 15 3 0.95455 35 3 0.88703 115 3 1.00000 13 1 0.950549 40 3 0.95833 24 3 0.95238 20 3 1.00000 6 0 1.00000 6 0 0.73348 66 5 NA 0 0 0.516667 38 3 0.86667 29 3 0.81818 33 3 0.73333 38 3 1.00000 2 0 0.75946 84 3 0.94725 130 3 0.94881 43 3 1.00000 9 0 NA 0 0 0.76726 117 3 0.953483 175 3 0.94335 100 5 0.945831 92 3 0.840523 49 3 NA 0 0 0.895833 50 3 0.7598684 51 3 0.701548 93 5 0.614328 247 5 0.56762 252 5 0.657269 468 5 0.90684 42 2 0.622763 446 5 0.90323 0.92685 0.91667 0.91229 0.83730 0.85185 0.85417 0.88095 0.86667 0.93939 0.84937 1.00000 0.950549 0.95833 0.95238 1.00000 1.00000 0.90236 NA 0.861111 0.86667 0.818182 0.88889 0.96079 0.75946 0.91208 0.93175 1.00000 NA 0.94543 0.906966 0.90558 0.945831 0.840523 NA 0.895833 0.759868 0.957126 0.749780 0.72381 0.744734 1.00000 0.678899 0 0.85362 0.88947 -0.00514875 3 0.84623 0.88835 -0.0421235 8.9917e-01 0.5938060 lowCoverage 1.0000000 1 lowCoverage 0.88199437 0.4236578 lowCoverage 1.00000 1 lowCoverage -0.0129822 0.75369 lowCoverage 1 lowCoverage 0.85297 0.856716 0.02939266 3 0.81547 0.664238 0.1512347 9.6743e-02 8.6239e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.1480e-01 9.8697e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.043551 4.3029e-01 lowCoverage 1.0000e+00 lowCoverage 0.85297 0.664605 0.17641811 5 0.81547 0.636643 0.1788297 1.1325e-14 0.99999995 weaklyHypermeth 1.4156e-12 1.00000 weaklyHypermeth 1.3718e-03 0.9994470 weaklyHypermeth 6.8589e-02 1.0000 weaklyHypermeth 0.1985076 2.4764e-02 lowCoverage 1.0000000 lowCoverage 0.88918 0.856716 0.0246081 3 0.86602 0.664238 0.2017829 2.5720e-01 8.3858e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3213e-01 9.7327e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0565333 3.2272e-01 lowCoverage 1.0000e+00 lowCoverage 0.88918 0.664605 0.1781673 3 0.86602 0.636643 0.2293779 2.1737e-10 1.0000000 lowCoverage 2.1737e-08 1 lowCoverage 5.9728e-04 0.999999 lowCoverage 3.1436e-02 1 lowCoverage 0.2114898 1.9311e-02 lowCoverage 1.00000000 lowCoverage 0.856716 0.664605 0.150144 3 0.664238 0.636643 0.0275949 5.0636e-05 5.7187e-01 lowCoverage 5.0636e-03 1.0000e+00 lowCoverage 1.2601e-01 8.5776e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1549565 7.4405e-02 lowCoverage 1.0000000 lowCoverage chr4 12992634 12993634 43852 ENSG00000205940 0.70481 197 5 0.65990 167 5 0.63227 159 5 0.75587 153 5 0.69870 120 5 0.68794 204 5 0.64432 153 5 0.61739 128 5 0.58818 106 5 0.74551 93 5 0.66436 271 5 0.64650 90 5 0.676001 141 5 0.67679 61 5 0.65966 148 5 0.67123 87 5 0.70321 124 5 0.71215 147 5 0.695491 108 5 0.735659 149 5 0.71710 35 4 0.82111 34 4 0.63851 137 5 0.65591 62 5 0.65552 58 5 0.64949 159 5 0.83333 21 2 0.85633 38 2 0.69358 124 5 0.74996 128 5 0.610095 128 5 0.74521 209 5 0.542537 133 5 0.574269 92 5 0.5775253 134 5 0.566667 35 4 0.6011223 83 5 0.578318 129 5 0.681696 150 5 0.73435 171 5 0.638578 141 5 0.68510 209 5 0.762087 180 5 0.70959 0.67208 0.63562 0.79045 0.71467 0.69518 0.65323 0.62393 0.59971 0.75189 0.68255 0.67038 0.696760 0.69331 0.68126 0.66803 0.72304 0.71128 0.68943 0.740599 0.69945 0.805692 0.65180 0.67549 0.63667 0.64690 0.79424 0.86001 0.70218 0.76400 0.624795 0.76209 0.570387 0.603696 0.5774805 0.552135 0.597706 0.599405 0.684183 0.74854 0.667430 0.69269 0.786293 4 0.67712 0.68844 -0.01369152 5 0.67604 0.69170 -0.0156530 8.9440e-01 0.0621915 insignificant 1.0000000 1 insignificant 0.92713972 0.0107615 weaklyHypometh 1.00000 1 insignificant -0.0400479 0.14179 lowCoverage 1 lowCoverage 0.67712 0.582508 0.10083855 5 0.67604 0.576061 0.0999835 7.7565e-08 9.9998e-01 weaklyHypermeth 2.2813e-06 1.0000e+00 weaklyHypermeth 5.6471e-05 9.9964e-01 weaklyHypermeth 2.1706e-03 1.0000e+00 weaklyHypermeth 0.105391 4.4406e-08 lowCoverage 4.0369e-06 lowCoverage 0.67712 0.680376 -0.02249664 5 0.67604 0.698902 -0.0228573 9.3934e-01 0.06876638 insignificant 1.0000e+00 1.00000 insignificant 9.1909e-01 0.0813376 insignificant 1.0000e+00 1.0000 insignificant -0.0215645 3.9866e-01 insignificant 1.0000000 insignificant 0.68844 0.582508 0.1098371 5 0.69170 0.576061 0.1156365 1.1110e-06 9.9991e-01 weaklyHypermeth 3.1744e-05 1.0000e+00 weaklyHypermeth 1.1705e-04 9.9927e-01 weaklyHypermeth 4.5019e-03 1.0000e+00 weaklyHypermeth 0.1454391 6.2486e-05 lowCoverage 3.4715e-03 lowCoverage 0.68844 0.680376 -0.0097009 5 0.69170 0.698902 -0.0072043 6.2940e-01 0.2776824 insignificant 1.0000e+00 1 insignificant 3.3910e-01 0.560145 insignificant 1.0000e+00 1 insignificant 0.0184834 5.7695e-01 lowCoverage 1.00000000 lowCoverage 0.582508 0.680376 -0.120927 5 0.576061 0.698902 -0.1228408 9.9997e-01 7.3188e-05 weaklyHypometh 1.0000e+00 2.9275e-03 weaklyHypometh 9.9995e-01 7.7202e-04 weaklyHypometh 1.00000000 3.6763e-02 weaklyHypometh -0.1269557 2.6177e-03 lowCoverage 0.1006797 lowCoverage chr4 16468990 16469990 44020 ENSG00000198631 0.92063 73 5 0.78383 155 5 0.65252 173 5 0.6000 9 0 0.83320 61 5 0.75312 68 5 0.76009 169 5 0.80838 143 5 0.83068 107 5 0.80127 112 5 0.78136 139 5 0.77056 165 5 0.63884 199 5 NA 0 0 0.83447 110 5 0.60617 133 5 0.76378 116 5 0.58727 32 5 0.82804 156 5 0.93985 69 5 0.92667 32 5 1.00000 6 0 0.83428 100 5 0.93778 39 5 0.66667 3 0 0.78890 180 5 0.75527 46 4 0.92271 37 5 0.80526 184 5 0.74310 157 5 0.79670 124 5 0.80732 135 5 0.86729 189 5 0.96667 80 5 0.98889 90 5 1.00000 3 0 0.89500 51 5 0.87737 163 5 0.96923 93 5 0.84929 80 5 1.00000 6 0 0.77778 27 3 0.86286 21 3 0.93806 0.80308 0.67729 0.75610 0.82063 0.74216 0.76844 0.79748 0.83129 0.81045 0.77450 0.79266 0.64058 NA 0.84427 0.6089 0.76418 0.56098 0.84893 0.92316 0.95528 1.00000 0.82087 0.94851 0.70956 0.83196 0.78953 0.92419 0.80542 0.74195 0.79847 0.81289 0.86391 0.97967 0.99322 0.97610 0.92622 0.89066 0.98124 0.85913 0.97850 0.81319 0.82578 0 0.77478 0.82167 -0.046745 5 0.76484 0.81425 -0.049415 0.99860 0.0075471 weaklyHypometh 1 1 insignificant 0.99984 0.00078393 weaklyHypometh 1 0.78393 insignificant -0.069210 0.069192 lowCoverage 1 lowCoverage 0.77478 0.91493 -0.138978 5 0.76484 0.90933 -0.144497 1.0000e+00 6.7222e-08 weaklyHypometh 1.0000e+00 3.3611e-05 weaklyHypometh 1.0000e+00 6.4207e-07 weaklyHypometh 1.0000000 0.00064207 weaklyHypometh -0.169691 0.00014651 lowCoverage 0.048835 lowCoverage 0.77478 0.89868 -0.123013 3 0.76484 0.89565 -0.130815 1.00000 1.5062e-05 lowCoverage 1 0.015062 lowCoverage 0.99993 0.00029301 lowCoverage 1 0.29301 lowCoverage -0.128986 0.029342 lowCoverage 1 lowCoverage 0.82167 0.91493 -0.092289 5 0.81425 0.90933 -0.095082 1.0000e+00 4.0046e-05 weaklyHypometh 1.0000e+00 0.020023 weaklyHypometh 9.9923e-01 0.017915 weaklyHypometh 1.0000000 1 insignificant -0.100481 0.0156729 lowCoverage 1.00000 lowCoverage 0.82167 0.89868 -0.076450 3 0.81425 0.89565 -0.081400 0.99954 0.0039282 lowCoverage 1 1 lowCoverage 0.96279 0.148514 lowCoverage 1 1 lowCoverage -0.059776 0.26109 lowCoverage 1 lowCoverage 0.91493 0.89868 0.015910 3 0.90933 0.89565 0.013682 0.36609 8.8236e-01 lowCoverage 1 1.00000000 lowCoverage 0.47299 9.2892e-01 lowCoverage 1 1.0000000 lowCoverage 0.040705 0.42106633 lowCoverage 1.00000 lowCoverage chr4 24030558 24031558 44820 PPARGC1A ENSG00000109819 0.91483 563 6 0.85739 534 6 0.73194 70 6 0.9251 374 6 0.83456 89 6 0.90211 619 6 0.81604 110 6 0.92268 178 6 0.94658 95 6 0.97222 37 5 0.91586 439 6 0.86111 26 2 0.89419 142 6 0.95238 50 6 0.95563 155 6 0.33333 33 2 1.00000 119 2 0.83668 719 6 0.92656 342 6 0.93843 509 6 0.88492 76 6 0.86944 70 5 0.88373 208 6 0.91356 131 6 0.98177 161 2 0.92654 551 6 0.79571 118 6 0.72987 54 6 0.90693 320 6 0.92239 532 6 0.94541 484 6 0.94340 517 6 0.61511 287 6 0.55198 159 6 0.81458 665 6 0.55098 32 2 0.74039 172 6 0.71633 535 6 0.96825 364 6 0.96908 387 6 0.93956 686 6 0.94550 353 6 0.86139 418 6 0.92898 0.90523 0.78708 0.92595 0.87330 0.89510 0.85732 0.92344 0.95782 0.98500 0.92181 0.80833 0.89741 0.97714 0.97370 0.7000 0.95660 0.85946 0.92561 0.93982 0.91833 0.89750 0.92298 0.89548 0.95565 0.92903 0.80721 0.89182 0.86130 0.92998 0.93654 0.94853 0.48817 0.36440 0.76061 0.63161 0.69883 0.58990 0.95207 0.94707 0.94653 0.93143 0.87516 2 0.90236 0.92549 -0.020245 6 0.89248 0.92002 -0.027541 0.96622 0.0529944 insignificant 1 1 insignificant 0.83636 0.27327390 insignificant 1 1.00000 insignificant -0.020090 0.594879 insignificant 1 insignificant 0.90236 0.68270 0.241891 6 0.89248 0.71267 0.179811 1.9179e-14 9.9538e-01 hypermethylated 4.7947e-12 1.0000e+00 hypermethylated 3.5367e-06 9.9952e-01 hypermethylated 0.0035367 1.00000000 hypermethylated 0.206985 0.00310540 weaklyHypermeth 0.517566 insignificant 0.90236 0.93116 -0.032178 6 0.89248 0.93985 -0.047367 0.99772 1.4696e-02 weaklyHypometh 1 1.000000 insignificant 0.96647 0.02637879 weaklyHypometh 1 1.00000 insignificant -0.064874 0.096072 insignificant 1 insignificant 0.92549 0.68270 0.214681 6 0.92002 0.71267 0.207352 3.2566e-11 9.9843e-01 hypermethylated 1.0855e-08 1.000000 hypermethylated 1.0222e-05 0.999931 hypermethylated 0.0051109 1 hypermethylated 0.227075 0.0022015 weaklyHypermeth 0.49927 insignificant 0.92549 0.93116 -0.016379 6 0.92002 0.93985 -0.019826 0.88754 0.1402254 insignificant 1 1 insignificant 0.85155 0.083278 insignificant 1 1 insignificant -0.044784 0.13698 insignificant 1 insignificant 0.68270 0.93116 -0.294540 6 0.71267 0.93985 -0.227179 0.99981 1.6829e-06 hypomethylated 1 0.00042072 hypomethylated 1.00000 1.2924e-05 hypomethylated 1 0.0064621 hypomethylated -0.271859 0.00088016 hypomethylated 0.29339 insignificant chr4 26351988 26352988 44957 ENSG00000200999 0.95356 197 7 0.82784 196 7 0.73832 49 6 0.9697 93 4 0.96599 41 2 0.85562 137 7 0.65417 69 6 0.88707 166 7 0.84053 68 6 0.93596 67 7 0.87339 263 7 0.92692 53 6 0.92777 194 7 0.92308 26 2 0.95040 81 7 0.76580 36 2 0.88095 17 0 0.89317 175 7 0.92951 188 6 0.89367 132 7 0.93571 43 5 0.95238 21 1 0.90236 167 7 0.86548 65 7 0.75198 45 2 0.97253 285 7 0.81648 64 5 0.76000 13 1 0.94342 209 7 0.90829 322 7 0.96515 253 7 0.91520 216 7 0.86610 187 7 0.81389 200 7 0.80273 97 7 0.92857 14 0 0.83712 73 6 0.90685 296 7 0.93529 107 5 0.93070 186 7 0.97227 98 6 0.87346 109 5 0.94603 108 7 0.94523 0.81060 0.71675 0.95191 0.94832 0.86214 0.70100 0.87778 0.80762 0.94927 0.86629 0.93082 0.93229 0.92272 0.94386 0.7376 0.87534 0.88178 0.92436 0.87617 0.94553 0.94309 0.90528 0.83679 0.86814 0.97905 0.78857 0.77522 0.93287 0.91628 0.95376 0.89606 0.83393 0.79440 0.75031 0.91463 0.75185 0.88664 0.92348 0.94906 0.95893 0.89717 0.93460 1 0.88746 0.92601 -0.023686 7 0.88940 0.91564 -0.026234 0.98707 0.0668261 insignificant 1 1 insignificant 0.95623 0.13052923 insignificant 1 1.00000 insignificant -0.011075 0.702646 insignificant 1 insignificant 0.88746 0.86390 0.047895 7 0.88940 0.84959 0.039814 2.9660e-04 8.5376e-01 weaklyHypermeth 3.2956e-02 1.0000e+00 weaklyHypermeth 9.8928e-02 6.9161e-01 insignificant 1.0000000 1.00000000 insignificant 0.020461 0.47147769 insignificant 1.000000 insignificant 0.88746 0.91612 -0.046173 7 0.88940 0.92698 -0.037580 0.98812 1.4851e-02 weaklyHypometh 1 1.000000 insignificant 0.99788 0.01740712 weaklyHypometh 1 1.00000 insignificant -0.051877 0.050403 insignificant 1 insignificant 0.92601 0.86390 0.063492 7 0.91564 0.84959 0.066047 4.4198e-05 9.9994e-01 weaklyHypermeth 6.3140e-03 1.000000 weaklyHypermeth 1.7792e-02 0.979529 weaklyHypermeth 1.0000000 1 insignificant 0.031537 0.3146813 insignificant 1.00000 insignificant 0.92601 0.91612 -0.023904 7 0.91564 0.92698 -0.011346 0.73927 0.1136353 insignificant 1 1 insignificant 0.98361 0.139073 insignificant 1 1 insignificant -0.040802 0.15783 insignificant 1 insignificant 0.86390 0.91612 -0.105846 7 0.84959 0.92698 -0.077394 0.98906 4.7307e-05 weaklyHypometh 1 0.00675811 weaklyHypometh 0.99723 8.6733e-03 weaklyHypometh 1 1.0000000 insignificant -0.072339 0.02278633 weaklyHypometh 1.00000 insignificant chr4 27753168 27754168 45054 ENSG00000221807 0.88571 85 5 0.68333 75 5 0.69556 39 5 0.66016 95 5 0.64802 78 5 0.83556 49 5 0.48611 43 5 0.66429 63 5 0.56703 45 5 0.76296 34 5 0.73577 122 5 0.59091 28 2 0.66377 66 5 0.66369 52 5 0.75909 46 5 0.52083 28 2 1.00000 6 0 0.72936 143 5 0.85000 30 3 0.56888 39 5 0.61111 18 3 0.80000 5 0 0.66526 53 5 0.69630 31 4 0.68587 59 5 0.71520 58 5 0.67216 48 3 0.70000 20 0 0.58090 66 5 0.61009 76 5 0.65175 44 5 0.79515 39 5 0.78300 74 5 0.74113 75 5 0.64667 48 5 0.00000 6 0 0.48377 31 2 0.58403 79 5 0.52277 68 5 0.71575 68 5 0.77548 91 5 0.92063 92 5 0.75588 99 5 0.87662 0.68687 0.71263 0.68800 0.59787 0.84158 0.61111 0.68019 0.58125 0.91279 0.66809 0.61019 0.68841 0.81385 0.75913 0.48106 1.00000 0.69239 0.87121 0.62165 0.71227 0.81818 0.67911 0.83704 0.69716 0.78137 0.64025 0.73864 0.60203 0.75845 0.67905 0.80725 0.73217 0.74269 0.64747 0.33294 0.51033 0.58671 0.65001 0.72905 0.78240 0.90380 0.71242 0 0.72384 0.71954 -0.0047283 5 0.69626 0.65307 0.0431827 0.38284 0.78132787 insignificant 1 1.00000 insignificant 0.463288 0.6689013 insignificant 1 1 insignificant 0.0165685 0.634540 lowCoverage 1 lowCoverage 0.72399 0.65815 0.060714 5 0.68090 0.60744 0.0734580 9.0638e-02 9.9275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0476444 9.9994e-01 weaklyHypermeth 1.00000 1.0000000 insignificant 0.158787 0.2370874 lowCoverage 1 lowCoverage 0.72289 0.77033 -0.0328699 5 0.60947 0.67629 -0.066822 0.93150 0.35199318 insignificant 1 1.00000 insignificant 0.937270 0.56227846 insignificant 1 1.00000 insignificant -0.0395540 5.9378e-01 lowCoverage 1.000000 lowCoverage 0.71790 0.65815 0.059929 5 0.55395 0.60744 -0.053491 1.8583e-01 8.0660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6674e-02 9.2235e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.142218 0.2799556 lowCoverage 1.00000 lowCoverage 0.72125 0.77033 -3.2933e-02 5 0.64919 0.67629 -0.0271046 0.98058 0.71039411 insignificant 1 1.00000 insignificant 0.86895 0.7623600 insignificant 1 1 insignificant -0.0561224 0.4415343 lowCoverage 1 lowCoverage 0.65595 0.76978 -0.097104 5 0.54202 0.62234 -0.080327 0.99954741 3.6992e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.999989 9.3133e-03 weaklyHypometh 1 1.000000 insignificant -0.198341 0.17606677 lowCoverage 1.00000 lowCoverage chr4 29269659 29270659 45138 ENSG00000209052 0.81264 503 17 0.63607 363 17 0.68838 248 17 0.76369 389 17 0.68625 196 17 0.73682 579 17 0.77811 204 16 0.75417 278 14 0.71710 225 17 0.80643 162 13 0.77517 493 17 0.69943 144 12 0.77725 309 16 0.69444 56 6 0.81780 194 16 0.58877 90 10 0.81734 111 11 0.81496 322 17 0.75348 305 13 0.78021 475 17 0.85620 102 11 0.71117 132 12 0.80781 275 17 0.80966 130 13 0.80840 89 11 0.79964 370 17 0.85093 185 12 0.82484 66 5 0.73361 308 15 0.81700 470 17 0.78289 360 15 0.74431 676 17 0.60203 265 16 0.70150 289 17 0.71548 251 13 0.74468 93 8 0.73673 118 11 0.68806 422 17 0.78411 336 16 0.81041 487 17 0.82104 353 17 0.80128 346 17 0.79342 414 16 0.82037 0.73667 0.74749 0.80743 0.80578 0.76787 0.79729 0.77897 0.75781 0.81291 0.81993 0.72975 0.85163 0.77793 0.85060 0.69384 0.82293 0.81320 0.83982 0.83445 0.85462 0.75064 0.81817 0.86305 0.83091 0.82708 0.86298 0.84698 0.78491 0.84643 0.82296 0.82537 0.69164 0.76727 0.74316 0.77189 0.79023 0.73212 0.80449 0.84519 0.85547 0.83907 0.81897 7 0.78073 0.83181 -0.0329642 17 0.75557 0.81573 -0.0601595 0.99956 0.00053122 weaklyHypometh 1 0.39334 insignificant 0.999999 0.0016072 weaklyHypometh 1 1 insignificant -0.0506134 0.013684 weaklyHypometh 1 insignificant 0.78066 0.74687 0.058601 17 0.75387 0.69165 0.0622278 7.4321e-08 9.9490e-01 weaklyHypermeth 1.0617e-05 1.0000e+00 weaklyHypermeth 0.0014680 9.6357e-01 weaklyHypermeth 0.29359 1.0000000 insignificant 0.046846 0.0949616 insignificant 1 insignificant 0.78095 0.79804 -0.0343269 17 0.76915 0.80755 -0.038400 0.99827 0.01048587 weaklyHypometh 1 1.00000 insignificant 0.999912 0.00176185 weaklyHypometh 1 0.88093 insignificant -0.0571268 1.3109e-03 weaklyHypometh 0.327728 insignificant 0.83170 0.74687 0.088380 17 0.79525 0.69165 0.103609 4.6145e-12 9.9999e-01 weaklyHypermeth 4.6145e-09 1.0000e+00 weaklyHypermeth 3.2707e-06 9.9995e-01 weaklyHypermeth 0.0032707 1.000000 weaklyHypermeth 0.097459 0.0034578 weaklyHypermeth 0.96085 insignificant 0.83186 0.79804 -2.5704e-04 17 0.80914 0.80755 0.0015926 0.54293 0.46024424 insignificant 1 1.00000 insignificant 0.77538 0.6881881 insignificant 1 1 insignificant -0.0065134 0.6601282 insignificant 1 insignificant 0.74721 0.79793 -0.092276 17 0.70292 0.79623 -0.093311 0.99980773 4.1253e-08 weaklyHypometh 1.00000 4.1253e-05 weaklyHypometh 0.999095 1.3453e-05 weaklyHypometh 1 0.013453 weaklyHypometh -0.103973 0.00338259 weaklyHypometh 0.57269 insignificant chr4 30791927 30792927 45281 ENSG00000215248 0.49841 43 5 NA 0 0 NA 0 0 0.53939 59 5 NA 0 0 0.54444 46 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.57365 417 5 0.51778 60 5 0.65000 60 5 0.61667 60 5 NA 0 0 NA 0 0 0.66667 30 5 NA 0 0 NA 0 0 0.50000 110 5 NA 0 0 NA 0 0 NA 0 0 0.54163 63 5 0.60000 82 5 0.60000 25 5 NA 0 0 NA 0 0 0.63429 74 5 0.36667 11 0 NA 0 0 0.63824 83 5 0.62699 64 5 0.55604 69 5 0.56923 65 5 0.45000 18 0 0.64091 57 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.57047 0.56129 0.0150013 5 0.57327 0.55812 0.0151496 0.26324 0.76103478 insignificant 1 1.00000 insignificant 0.617337 0.7075805 insignificant 1 1 insignificant -0.0187528 0.607611 lowCoverage 1 lowCoverage 0.57047 0.61905 -0.045350 5 0.57327 0.61801 -0.0447439 8.8930e-01 3.4247e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.8138132 5.7871e-01 insignificant 1.00000 1.0000000 insignificant 0.016511 0.8729370 lowCoverage 1 lowCoverage 0.57047 0.58974 -0.0154857 5 0.57327 0.58847 -0.015203 0.83558 0.46053887 insignificant 1 1.00000 insignificant 0.697142 0.55331811 insignificant 1 1.00000 insignificant -0.0057279 8.8900e-01 lowCoverage 1.000000 lowCoverage 0.56129 0.61905 -0.058527 5 0.55812 0.61801 -0.059893 8.4331e-01 9.6733e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5129e-01 5.4828e-01 insignificant 1.0000000 1.000000 insignificant 0.035264 0.7387594 lowCoverage 1.00000 lowCoverage 0.56129 0.58974 -3.0487e-02 5 0.55812 0.58847 -0.0303522 0.87805 0.42483833 insignificant 1 1.00000 insignificant 0.72318 0.8060338 insignificant 1 1 insignificant 0.0130250 0.7758393 lowCoverage 1 lowCoverage 0.61905 0.58974 0.029846 5 0.61801 0.58847 0.029541 0.40187908 7.4409e-01 insignificant 1.00000 1.0000e+00 insignificant 0.477650 8.4348e-01 insignificant 1 1.000000 insignificant -0.022239 0.83396698 lowCoverage 1.00000 lowCoverage chr4 33350784 33351784 45422 ENSG00000215248 0.71658 306 5 0.57124 133 5 0.66212 111 5 0.75573 227 5 0.62862 113 5 0.69602 138 5 0.71648 131 5 0.72325 143 5 0.74613 82 5 0.65717 74 5 0.72456 137 5 0.68376 70 5 0.65624 160 5 0.72944 45 5 0.66077 135 5 0.68662 80 5 0.63700 175 5 0.69714 279 5 0.70944 165 5 0.73209 216 5 0.65394 53 5 0.79830 68 5 0.69186 207 5 0.67357 84 5 0.73111 125 5 0.72170 109 5 0.69589 100 5 0.63846 64 5 0.67771 136 5 0.67608 81 5 0.67255 126 5 0.70692 186 5 0.64477 148 5 0.62599 160 5 0.69571 102 5 0.65998 57 5 0.66517 134 5 0.61153 132 5 0.73717 342 5 0.75600 245 5 0.73638 283 5 0.74654 224 5 0.73338 244 5 0.73666 0.58830 0.68565 0.77301 0.66059 0.70033 0.72432 0.74266 0.75468 0.66906 0.74027 0.70353 0.67963 0.74006 0.67429 0.71256 0.64330 0.71751 0.72020 0.73432 0.68437 0.80293 0.69707 0.68841 0.74642 0.75162 0.70320 0.64944 0.69254 0.69350 0.69540 0.70791 0.64846 0.62864 0.69969 0.67100 0.66290 0.62836 0.75102 0.76484 0.75376 0.76155 0.75437 5 0.70068 0.71397 -0.0024488 5 0.69226 0.69882 -0.0065597 0.39994 0.26232954 insignificant 1 1.00000 insignificant 0.678765 0.3334800 insignificant 1 1 insignificant -0.0053226 0.739520 insignificant 1 insignificant 0.70068 0.64939 0.061943 5 0.69226 0.64245 0.0498150 9.9346e-06 7.0809e-01 weaklyHypermeth 8.2789e-04 1.0000e+00 weaklyHypermeth 0.0045840 7.9927e-01 weaklyHypermeth 0.41673 1.0000000 insignificant 0.038993 0.0297790 weaklyHypermeth 1 insignificant 0.70068 0.76457 -0.0488051 5 0.69226 0.74124 -0.048984 0.99426 0.01671321 weaklyHypometh 1 1.00000 insignificant 0.998086 0.00758321 weaklyHypometh 1 1.00000 insignificant -0.0523748 8.7325e-05 weaklyHypometh 0.034682 weaklyHypometh 0.71397 0.64939 0.065275 5 0.69882 0.64245 0.056375 1.1096e-03 9.5623e-01 weaklyHypermeth 9.2469e-02 1.0000e+00 weaklyHypermeth 2.3116e-02 8.9665e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.044316 0.0224686 weaklyHypermeth 1.00000 insignificant 0.71397 0.76457 -4.5814e-02 5 0.69882 0.74124 -0.0424245 0.97707 0.04941626 weaklyHypometh 1 1.00000 insignificant 0.99371 0.0507539 insignificant 1 1 insignificant -0.0470523 0.0027153 weaklyHypometh 1 insignificant 0.64939 0.76457 -0.109901 5 0.64245 0.74124 -0.098799 0.99004896 1.2548e-05 weaklyHypometh 1.00000 4.3932e-03 weaklyHypometh 0.985871 1.7542e-03 weaklyHypometh 1 0.629370 insignificant -0.091368 0.00037011 weaklyHypometh 0.30432 insignificant chr4 38283796 38284796 45627 ENSG00000211560 0.91319 104 5 0.73338 74 2 0.93385 64 5 0.88894 93 5 0.71933 69 5 0.89672 105 6 0.79454 81 4 0.84898 81 5 0.77424 56 5 0.92941 38 4 0.91573 159 5 0.86364 42 4 0.98000 48 5 0.93750 16 2 0.90604 90 5 0.82462 47 4 0.90559 57 4 0.89815 65 5 0.95192 98 5 0.97907 109 5 1.00000 22 1 1.00000 10 2 0.95455 81 5 1.00000 32 2 0.95889 41 2 0.92777 96 5 0.87714 43 4 0.92857 10 1 0.85267 52 3 0.91635 105 5 0.92523 132 6 0.84354 128 5 0.83918 104 5 0.81858 136 5 1.00000 45 5 0.72727 52 5 0.94573 64 5 0.61254 107 5 0.89000 88 5 0.97108 141 5 0.93434 80 3 0.96462 53 5 0.96574 51 3 0.88148 0.87138 0.90031 0.93442 0.73804 0.87653 0.82579 0.85727 0.73575 0.82830 0.89686 0.81020 0.95135 0.95203 0.92842 0.60457 0.85995 0.97748 0.93373 0.96711 1.00000 0.97995 0.94628 1.00000 0.91577 0.90851 0.82017 0.85027 0.79928 0.90871 0.91051 0.88158 0.78825 0.78893 1.00000 0.91743 0.87942 0.86107 0.92027 0.95464 0.97052 0.94231 0.91577 1 0.89632 0.90775 -0.0194715 5 0.87860 0.91118 -0.0325844 0.75209 0.24932813 insignificant 1 1.00000 insignificant 0.979671 0.0715842 insignificant 1 1 insignificant -0.0523168 0.030868 lowCoverage 1 lowCoverage 0.89639 0.80444 0.066366 5 0.89594 0.72816 0.1677799 5.1434e-02 1.3446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.7666132 7.5933e-02 insignificant 1.00000 1.0000000 insignificant 0.055858 0.3898646 lowCoverage 1 lowCoverage 0.89632 0.94189 -0.0559214 5 0.87860 0.93938 -0.060783 0.99730 0.00829807 weaklyHypometh 1 1.00000 insignificant 0.999163 0.00925975 weaklyHypometh 1 1.00000 insignificant -0.0654146 1.1428e-02 lowCoverage 1.000000 lowCoverage 0.90800 0.81250 0.109307 5 0.92387 0.77578 0.148090 1.2802e-02 7.4341e-02 weaklyHypermeth 7.5306e-01 1.0000e+00 insignificant 5.5609e-01 2.9052e-01 insignificant 1.0000000 1.000000 insignificant 0.108175 0.1229138 lowCoverage 1.00000 lowCoverage 0.90775 0.94189 -3.5274e-02 5 0.91118 0.93938 -0.0281991 0.95876 0.00838105 weaklyHypometh 1 1.00000 insignificant 0.84951 0.1156637 insignificant 1 1 insignificant -0.0130978 0.5603143 lowCoverage 1 lowCoverage 0.82438 0.94189 -0.136535 5 0.84952 0.93938 -0.089860 0.88838913 1.5319e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.898497 3.7022e-01 insignificant 1 1.000000 insignificant -0.121273 0.09130132 lowCoverage 1.00000 lowCoverage chr4 39936293 39937293 45663 RHOH ENSG00000168421 0.70432 67 2 0.73090 64 4 0.58827 61 4 0.80313 126 9 0.66369 56 4 0.76156 130 4 0.59216 56 4 0.89940 71 4 0.73819 63 5 0.79167 53 5 0.77917 149 5 0.64286 32 4 0.58841 100 4 0.94444 8 1 0.78737 46 4 0.29722 25 2 0.61789 35 3 0.72739 112 6 0.75012 75 6 0.79397 129 6 0.80667 36 5 0.73391 61 4 0.66318 89 4 0.71784 71 5 0.72337 34 3 0.75551 105 6 0.71501 79 5 0.43939 35 3 0.84064 76 4 0.62285 108 7 0.67290 133 7 0.54577 155 5 0.67690 72 5 0.92615 57 3 0.87879 168 4 0.72619 21 0 0.73356 59 4 0.79182 86 6 0.68013 38 1 0.83005 88 6 0.39352 42 3 0.83810 27 2 0.64348 119 7 0.83702 0.83109 0.70440 0.85688 0.75952 0.81696 0.64560 0.83216 0.79301 0.83718 0.83957 0.74380 0.66300 0.88000 0.83738 0.21139 0.74583 0.76247 0.88893 0.83265 0.87692 0.66484 0.81447 0.77173 0.75264 0.80241 0.76452 0.62438 0.83677 0.72865 0.73129 0.82183 0.66193 0.90254 0.87220 0.53388 0.78330 0.83805 0.89523 0.96376 0.70676 0.94579 0.79950 2 0.78052 0.75560 0.0133882 4 0.75549 0.65178 0.1037151 0.41563 0.96668755 lowCoverage 1 1.00000 lowCoverage 0.494203 0.9962151 lowCoverage 1 1 lowCoverage 0.0236851 0.596944 lowCoverage 1 lowCoverage 0.78052 0.81210 -0.027558 4 0.75549 0.80575 -0.0502558 6.0534e-01 1.4274e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.5832540 1.8210e-01 lowCoverage 1.00000 1.0000000 lowCoverage -0.078795 0.1409656 lowCoverage 1 lowCoverage 0.78052 0.80573 -0.0770944 3 0.75549 0.68874 0.066758 0.55592 0.36630753 lowCoverage 1 1.00000 lowCoverage 0.708884 0.20486252 lowCoverage 1 1.00000 lowCoverage 0.0330488 7.1759e-01 lowCoverage 1.000000 lowCoverage 0.75560 0.81210 -0.039114 5 0.65178 0.80575 -0.153971 7.9779e-01 8.0010e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7489e-01 6.5209e-02 insignificant 1.0000000 1.000000 insignificant -0.102480 0.0669321 lowCoverage 1.00000 lowCoverage 0.75560 0.80573 -8.8426e-02 3 0.65178 0.68874 -0.0369567 0.95736 0.05718394 lowCoverage 1 1.00000 lowCoverage 0.97878 0.1454940 lowCoverage 1 1 lowCoverage 0.0093638 0.9181981 lowCoverage 1 lowCoverage 0.81210 0.80573 -0.035158 3 0.80575 0.68874 0.117014 0.08437575 3.5836e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.120920 7.2396e-01 lowCoverage 1 1.000000 lowCoverage 0.111844 0.26122652 lowCoverage 1.00000 lowCoverage chr4 40558392 40559392 45675 ENSG00000207195 0.62889 48 5 0.90182 32 5 0.86168 46 5 0.37500 24 4 0.85810 33 4 0.55778 183 5 0.92157 44 2 0.95000 11 0 0.93598 43 5 1.00000 22 2 0.94722 67 5 0.79444 48 5 0.82667 35 5 NA 0 0 1.00000 28 2 0.83333 26 2 0.88889 17 2 0.50000 32 4 0.96250 50 5 0.57566 116 5 1.00000 17 2 0.55714 27 4 0.61364 41 5 0.75325 32 4 0.50000 6 0 0.85476 37 5 0.57444 32 4 0.84286 22 2 0.67619 27 4 0.80238 40 5 0.77167 46 5 0.59253 186 5 0.66422 50 4 0.93500 46 5 0.80000 21 4 0.75000 8 0 0.90143 28 2 0.58500 47 5 0.77167 29 4 0.79048 32 4 0.73333 30 4 0.60500 22 2 0.45000 17 2 0.56750 0.89227 0.85281 0.24754 0.84893 0.38708 0.94853 0.99375 0.93991 1.00000 0.94479 0.81458 0.80750 NA 1.00000 0.91667 0.90339 0.41629 0.94844 0.51211 0.84886 0.40000 0.63920 0.79870 0.56250 0.87768 0.51417 0.91786 0.73333 0.77887 0.72875 0.45481 0.71611 0.87625 0.85000 0.84512 0.90643 0.52208 0.68813 0.71786 0.67500 0.63813 0.29125 0 0.73260 0.66472 0.0623033 5 0.73068 0.67331 0.0573760 0.12588 0.96685447 insignificant 1 1.00000 insignificant 0.022974 0.9882310 weaklyHypermeth 1 1 insignificant 0.0947198 0.130119 lowCoverage 1 lowCoverage 0.73260 0.76000 -0.041333 4 0.73068 0.76546 -0.0347805 6.3934e-01 4.6535e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.6003907 8.4968e-01 lowCoverage 1.00000 1.0000000 lowCoverage 0.033683 0.6376322 lowCoverage 1 lowCoverage 0.73260 0.69231 0.0316161 3 0.73068 0.69659 0.034096 0.35228 0.08234279 lowCoverage 1 1.00000 lowCoverage 0.069646 0.27577679 lowCoverage 1 1.00000 lowCoverage 0.1361957 1.1378e-01 lowCoverage 1.000000 lowCoverage 0.66472 0.76000 -0.102078 4 0.67331 0.76546 -0.092156 9.0631e-01 6.4082e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6235e-01 1.4260e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.061037 0.4021084 lowCoverage 1.00000 lowCoverage 0.66472 0.69231 -2.8371e-02 3 0.67331 0.69659 -0.0232805 0.79110 0.09956248 lowCoverage 1 1.00000 lowCoverage 0.46220 0.1942624 lowCoverage 1 1 lowCoverage 0.0414759 0.6054357 lowCoverage 1 lowCoverage 0.76000 0.69231 0.072256 3 0.76546 0.69659 0.068876 0.14041622 5.3260e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.088435 4.8410e-01 lowCoverage 1 1.000000 lowCoverage 0.102513 0.25710632 lowCoverage 1.00000 lowCoverage chr4 42121819 42122819 45782 SHISA3 ENSG00000178343 0.50914 312 6 0.44243 297 6 0.71055 134 6 0.56684 314 6 0.52764 129 6 0.72289 404 6 0.46263 149 6 0.50180 234 6 0.43649 214 6 0.47484 126 6 0.60717 237 6 0.48120 114 5 0.52583 193 6 0.51557 116 6 0.53122 270 6 0.54028 59 4 0.59792 29 2 0.63549 279 6 0.57750 201 6 0.51528 332 6 0.66266 67 5 0.60579 154 6 0.74325 187 6 0.56097 156 6 0.49798 53 3 0.53639 350 6 0.43548 169 6 0.40639 117 6 0.51184 180 6 0.44993 357 6 0.46272 289 6 0.59869 318 6 0.80690 194 6 0.75719 91 6 1.00000 12 1 0.63889 26 1 0.69500 164 7 0.73496 201 6 0.60062 270 6 0.80887 213 6 0.61654 244 6 0.46836 225 6 0.68547 248 6 0.45936 0.32026 0.67860 0.48942 0.47223 0.65895 0.50456 0.48303 0.39647 0.53204 0.55568 0.50979 0.43009 0.47265 0.43651 0.49727 0.50473 0.58352 0.51768 0.45936 0.63844 0.55067 0.66848 0.57415 0.46884 0.48987 0.44320 0.44143 0.46546 0.39663 0.37890 0.53968 0.76524 0.69366 NA 0.67342 0.71699 0.77790 0.53096 0.68899 0.56540 0.51681 0.59929 6 0.46995 0.48394 0.0072360 6 0.47448 0.44517 0.0293095 0.64884 0.81526661 insignificant 1 1.00000 insignificant 0.844002 0.6265328 insignificant 1 1 insignificant 0.0047959 0.888868 insignificant 1 insignificant 0.47006 0.75872 -0.241193 6 0.54226 0.70960 -0.1673369 9.9940e-01 4.6922e-14 hypomethylated 1.0000e+00 4.6922e-11 hypomethylated 0.9999953 1.0304e-06 hypomethylated 1.00000 0.0010304 hypomethylated -0.228020 0.0051159 lowCoverage 1 lowCoverage 0.47006 0.49083 -0.0742875 6 0.54226 0.63174 -0.089476 0.91062 0.00064935 weaklyHypometh 1 0.64935 insignificant 0.996580 0.00075363 weaklyHypometh 1 0.75363 insignificant -0.0918362 1.7889e-01 insignificant 1.000000 insignificant 0.48414 0.75872 -0.247103 6 0.50877 0.70960 -0.200833 9.9978e-01 3.4368e-12 hypomethylated 1.0000e+00 3.4368e-09 hypomethylated 9.9999e-01 1.8093e-05 hypomethylated 1.0000000 0.018093 hypomethylated -0.232816 0.0038434 lowCoverage 0.96085 lowCoverage 0.48414 0.49083 -7.9196e-02 6 0.50877 0.63174 -0.1229728 0.88034 0.00010132 weaklyHypometh 1 0.10132 insignificant 0.89708 0.0027088 weaklyHypometh 1 1 insignificant -0.0966321 0.1723259 insignificant 1 insignificant 0.75872 0.49083 0.165934 6 0.70960 0.63174 0.077861 0.00010440 9.8625e-01 weaklyHypermeth 0.10440 1.0000e+00 insignificant 0.011792 9.9825e-01 weaklyHypermeth 1 1.000000 insignificant 0.136184 0.10653290 lowCoverage 1.00000 lowCoverage chr4 48628833 48629833 45964 ENSG00000210425 0.86553 249 7 0.72676 176 7 0.68241 91 5 0.78568 201 7 0.91071 47 3 0.82701 293 7 0.66865 61 6 0.81396 184 4 0.80884 62 4 0.88041 79 4 0.89247 205 7 0.62721 43 4 0.91136 130 4 0.86667 16 1 0.78277 90 4 0.62500 13 1 0.79048 17 3 0.80258 196 7 0.88269 164 7 0.87208 198 7 0.66098 28 2 0.84084 74 5 0.75689 97 5 0.95578 28 4 0.67857 43 3 0.87321 333 7 0.80169 85 4 0.83333 21 2 0.89967 139 4 0.85002 349 7 0.79553 285 7 0.84994 300 7 0.50619 102 6 0.79450 124 5 0.73567 191 5 0.78095 28 4 0.83765 70 4 0.71983 344 7 0.85124 156 7 0.89073 197 7 0.89761 178 7 0.79134 200 7 0.87526 144 7 0.88879 0.83980 0.79333 0.85382 0.87237 0.89640 0.75890 0.90310 0.87594 0.89573 0.89956 0.81165 0.92229 0.82363 0.85961 0.63531 0.79041 0.86186 0.89581 0.89963 0.65645 0.92970 0.85534 0.92326 0.89435 0.94087 0.87142 0.92113 0.91267 0.93255 0.93037 0.93096 0.62927 0.84018 0.83882 0.85268 0.88369 0.81534 0.89982 0.94343 0.88868 0.88668 0.94164 1 0.86243 0.88664 -0.0344197 7 0.82518 0.83406 -0.0088813 0.76479 0.00824319 weaklyHypometh 1 1.00000 insignificant 0.975509 0.0148649 weaklyHypometh 1 1 insignificant -0.0152086 0.638929 lowCoverage 1 lowCoverage 0.86243 0.74622 0.101522 7 0.82518 0.70644 0.1187450 9.8006e-09 8.4649e-01 weaklyHypermeth 1.9601e-06 1.0000e+00 weaklyHypermeth 0.0043653 6.9752e-01 weaklyHypermeth 0.41673 1.0000000 insignificant 0.072032 0.2088809 lowCoverage 1 lowCoverage 0.86243 0.90514 -0.0383175 7 0.82518 0.86442 -0.039235 0.90880 0.01826921 weaklyHypometh 1 1.00000 insignificant 0.950636 0.01010789 weaklyHypometh 1 1.00000 insignificant -0.0600753 4.9871e-02 lowCoverage 1.000000 lowCoverage 0.88664 0.74622 0.136380 7 0.83406 0.70644 0.127626 5.9062e-07 9.9962e-01 weaklyHypermeth 8.4375e-05 1.0000e+00 weaklyHypermeth 1.0589e-02 9.7094e-01 weaklyHypermeth 0.9626632 1.000000 insignificant 0.087241 0.1445940 lowCoverage 1.00000 lowCoverage 0.88664 0.90514 -4.6283e-03 7 0.83406 0.86442 -0.0303541 0.62883 0.30169702 insignificant 1 1.00000 insignificant 0.64816 0.7169285 insignificant 1 1 insignificant -0.0448667 0.1726295 lowCoverage 1 lowCoverage 0.74622 0.90514 -0.135730 7 0.70644 0.86442 -0.157980 0.99956195 3.8850e-05 weaklyHypometh 1.00000 7.7700e-03 weaklyHypometh 0.992682 1.7227e-02 weaklyHypometh 1 1.000000 insignificant -0.132108 0.03960600 weaklyHypometh 1.00000 insignificant chr4 52397584 52398584 45967 ENSG00000223099 0.82258 469 13 0.71294 238 11 0.65053 161 12 0.77119 360 13 0.82798 98 12 0.78944 401 12 0.69440 118 8 0.72391 187 10 0.59910 65 5 0.82859 121 10 0.83425 322 12 0.73520 73 7 0.83016 197 9 0.83516 36 2 0.84187 129 11 0.86212 35 4 0.93287 131 5 0.82479 322 13 0.83736 265 12 0.70761 370 12 0.75294 51 6 0.86534 97 9 0.85349 265 13 0.78460 75 9 0.75192 133 10 0.87503 231 12 0.71570 98 6 0.72784 61 5 0.85204 154 10 0.81423 228 11 0.87508 218 12 0.82236 417 12 0.59128 147 10 0.70016 147 12 0.66193 284 13 0.84477 122 7 0.83559 100 8 0.73351 255 12 0.81345 354 13 0.81259 408 13 0.85788 379 13 0.81590 373 13 0.75044 372 13 0.81138 0.76835 0.73144 0.83555 0.86353 0.75356 0.76043 0.76326 0.73911 0.84496 0.83244 0.70786 0.84974 0.85133 0.86543 0.87377 0.90057 0.82274 0.81941 0.78814 0.70021 0.86091 0.82690 0.75698 0.86783 0.79178 0.78016 0.86231 0.82019 0.81848 0.81715 0.80571 0.62919 0.73477 0.73933 0.83691 0.75572 0.78906 0.81957 0.80702 0.84827 0.80530 0.83111 5 0.81747 0.81065 0.0013940 12 0.75904 0.81564 -0.0566029 0.90138 0.39662841 insignificant 1 1.00000 insignificant 0.891432 0.2561451 insignificant 1 1 insignificant -0.0244449 0.334679 insignificant 1 insignificant 0.81758 0.69384 0.120378 12 0.76417 0.77086 -0.0066877 3.1149e-07 9.9457e-01 weaklyHypermeth 3.4610e-05 1.0000e+00 weaklyHypermeth 0.0278995 9.9638e-01 weaklyHypermeth 1.00000 1.0000000 insignificant 0.055228 0.2522862 insignificant 1 insignificant 0.81765 0.83351 0.0050506 12 0.76594 0.74014 0.025800 0.46509 0.21729438 insignificant 1 1.00000 insignificant 0.776398 0.32521862 insignificant 1 1.00000 insignificant -0.0269489 2.9932e-01 insignificant 1.000000 insignificant 0.81080 0.69384 0.103281 12 0.81774 0.77086 0.046887 3.5788e-05 9.9984e-01 weaklyHypermeth 3.5788e-03 1.0000e+00 weaklyHypermeth 2.1216e-02 9.9990e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.079673 0.1133150 insignificant 1.00000 insignificant 0.81104 0.83351 7.6103e-05 12 0.82830 0.74014 0.0881551 0.67080 0.09150217 insignificant 1 1.00000 insignificant 0.66010 0.6894216 insignificant 1 1 insignificant -0.0025040 0.9192441 insignificant 1 insignificant 0.69326 0.83351 -0.105091 12 0.74221 0.74014 0.002074 0.99999997 1.3180e-05 weaklyHypometh 1.00000 4.3932e-03 weaklyHypometh 0.999963 1.8881e-03 weaklyHypometh 1 0.629370 insignificant -0.082177 0.10555977 insignificant 1.00000 insignificant chr4 57839551 57840551 46178 IGFBP7 ENSG00000163453 0.85516 97 5 0.88926 113 5 0.71023 94 5 0.93500 26 4 0.98824 47 3 0.89964 132 5 0.77955 66 3 0.87566 110 5 0.83863 95 5 0.98824 61 4 0.88603 197 5 0.96444 54 4 0.91602 121 5 NA 0 0 0.81410 101 5 0.71571 53 5 0.93137 48 4 0.83143 34 5 0.91130 122 5 0.91384 131 5 0.86238 77 5 0.86667 19 2 0.85749 104 5 0.78333 32 3 1.0000 4 0 0.85836 100 5 0.83947 88 5 0.85833 41 2 0.85298 59 5 0.89332 112 5 0.92304 126 5 0.90463 182 5 0.12041 157 5 0.29849 91 5 0.04000 49 2 0.36190 18 1 0.32296 62 5 0.28654 138 5 0.85939 57 4 0.93354 93 5 0.81000 27 4 0.78274 56 5 0.90000 19 2 0.86496 0.90184 0.72289 0.92210 0.98721 0.90288 0.78632 0.87937 0.83668 0.98721 0.89160 0.96940 0.92138 NA 0.82822 0.73447 0.91517 0.84161 0.91841 0.91621 0.85110 0.83575 0.86744 0.80072 0.95595 0.85882 0.85472 0.87017 0.85792 0.88517 0.92841 0.90629 0.12722 0.27579 0.11768 0.38613 0.32430 0.31518 0.87352 0.93855 0.81522 0.80422 0.92754 0 0.88484 0.88771 -0.0037780 5 0.87749 0.88665 -0.009160 0.72693 0.46532995 insignificant 1 1.00000 insignificant 0.56485 0.723846 insignificant 1 1 insignificant 0.00099096 0.967058 lowCoverage 1 lowCoverage 0.88484 0.22330 0.6629683 5 0.87749 0.21658 0.6609160 2.0680e-46 1.00000 hypermethylated 2.0680e-43 1 hypermethylated 5.0015e-13 1.000000 hypermethylated 5.0015e-10 1 hypermethylated 0.637609 1.8415e-05 lowCoverage 0.018415 lowCoverage 0.88484 0.88095 0.0007614 5 0.87749 0.87661 0.00088243 0.71904 5.0478e-01 insignificant 1 1.0000000 insignificant 0.42399 5.6771e-01 insignificant 1 1.000000 insignificant 0.018857 0.5866980 lowCoverage 1 lowCoverage 0.88771 0.22330 0.6639885 5 0.88665 0.21658 0.6700759 1.0547e-34 1.000000 hypermethylated 1.0547e-31 1 hypermethylated 6.3518e-11 1.000000 hypermethylated 6.3518e-08 1 hypermethylated 0.636618 2.7399e-05 lowCoverage 0.027399 lowCoverage 0.88771 0.88095 0.008670 5 0.88665 0.87661 0.010042 0.34362 0.548916 insignificant 1 1 insignificant 0.39319 0.454363 insignificant 1 1 insignificant 0.0178662 0.5913337 lowCoverage 1 lowCoverage 0.22330 0.88095 -0.668113 5 0.21658 0.87661 -0.660034 1.00000 2.3086e-18 hypomethylated 1 2.3086e-15 hypomethylated 1.00000 1.0939e-07 hypomethylated 1 0.00010939 hypomethylated -0.618752 9.7948e-06 lowCoverage 0.0097948 lowCoverage chr4 61848367 61849367 46452 ENSG00000216027 0.83631 112 5 0.83509 55 5 0.93506 43 5 0.91830 78 5 0.92000 19 1 0.81401 150 5 0.94000 28 2 0.77417 72 5 0.76462 42 5 0.83095 36 5 0.85121 77 5 0.80000 15 0 0.76615 50 5 0.89333 40 2 0.89848 33 2 0.90000 26 3 1.00000 8 0 0.88049 156 5 0.90000 49 2 0.90531 120 5 0.88000 13 2 0.82250 47 5 0.81024 73 5 0.77857 24 2 0.7300 31 5 0.84946 83 5 0.78909 25 2 0.67000 15 1 0.85423 66 2 0.90085 82 5 0.84790 92 5 0.84930 154 5 0.64778 75 5 0.42857 40 2 0.47368 38 2 0.66667 9 0 0.76923 46 5 0.67894 64 5 0.87524 91 5 0.87810 73 5 0.86000 58 5 0.88889 37 5 0.89912 109 5 0.77085 0.77501 0.92832 0.87098 0.87013 0.76959 0.90909 0.70955 0.73457 0.80945 0.80785 0.67532 0.70829 0.82684 0.84111 0.85390 0.97393 0.84271 0.84091 0.88124 0.81818 0.74821 0.76592 0.69852 0.68149 0.79810 0.76151 0.66234 0.81346 0.85997 0.78528 0.81160 0.68240 0.46104 0.50679 0.64562 0.73926 0.67909 0.80396 0.83278 0.83442 0.81962 0.85193 0 0.83871 0.81702 0.0176478 5 0.85661 0.84113 0.015477 0.36386 0.90424787 insignificant 1 1.00000 insignificant 0.13618 0.988878 insignificant 1 1 insignificant 0.05299632 0.035421 lowCoverage 1 lowCoverage 0.83871 0.62868 0.2007310 5 0.85661 0.62452 0.2320889 1.6886e-14 1.00000 hypermethylated 8.4428e-12 1 hypermethylated 1.5894e-07 0.999996 hypermethylated 7.9471e-05 1 hypermethylated 0.257364 3.9869e-03 lowCoverage 0.996734 lowCoverage 0.83871 0.87500 -0.0241079 5 0.85661 0.88238 -0.02576640 0.92829 2.2723e-02 weaklyHypometh 1 1.0000000 insignificant 0.65098 1.5783e-01 insignificant 1 1.000000 insignificant -0.012094 0.4525680 lowCoverage 1 lowCoverage 0.81702 0.62868 0.1825017 5 0.84113 0.62452 0.2166119 5.4916e-08 0.999996 weaklyHypermeth 9.1526e-06 1 weaklyHypermeth 9.0829e-05 0.999363 weaklyHypermeth 3.0276e-02 1 weaklyHypermeth 0.204367 1.0598e-02 lowCoverage 1.000000 lowCoverage 0.81702 0.87500 -0.041415 5 0.84113 0.88238 -0.041243 0.98664 0.024268 weaklyHypometh 1 1 insignificant 0.96551 0.030218 weaklyHypometh 1 1 insignificant -0.0650903 0.0060504 lowCoverage 1 lowCoverage 0.62868 0.87500 -0.224005 5 0.62452 0.88238 -0.257855 0.99999 1.1166e-06 hypomethylated 1 5.5832e-04 hypomethylated 0.99996 2.2464e-05 hypomethylated 1 0.01123200 hypomethylated -0.269458 3.8184e-03 lowCoverage 1.0000000 lowCoverage chr4 66121961 66122961 46668 ENSG00000209094 0.88078 362 5 0.79294 400 5 0.81401 169 5 0.87269 297 5 0.84891 95 5 0.86560 510 5 0.93231 141 5 0.88089 298 5 0.88427 223 5 0.92406 121 5 0.89216 313 5 0.91814 110 5 0.92680 210 5 0.88217 172 5 0.86646 204 5 0.88092 124 5 0.80000 5 0 0.87011 319 5 0.91295 282 5 0.88075 328 5 0.86848 54 5 0.82941 87 5 0.92423 170 5 0.89373 118 5 0.9381 52 5 0.92149 385 5 0.88770 88 5 0.96075 103 5 0.92225 233 5 0.94845 404 5 0.91445 299 5 0.84674 268 5 0.77864 249 5 0.85238 52 5 0.93750 203 5 0.80000 5 0 0.81549 301 5 0.85455 252 5 0.83201 308 5 0.93887 207 5 0.90395 301 5 0.93126 205 5 0.92694 296 5 0.87559 0.78942 0.80507 0.86663 0.85055 0.85992 0.93730 0.87793 0.88342 0.92539 0.88932 0.91424 0.92438 0.88344 0.86734 0.87671 0.83544 0.86620 0.91197 0.87671 0.87549 0.82893 0.92026 0.89022 0.94002 0.91807 0.89312 0.96287 0.91695 0.92481 0.90932 0.83624 0.76456 0.83921 0.93275 0.78481 0.80254 0.84095 0.96221 0.93891 0.90152 0.92453 0.92697 5 0.87380 0.90704 -0.0320481 5 0.87639 0.90889 -0.032494 0.99982 0.00081167 weaklyHypometh 1 0.81167 insignificant 0.99924 0.014007 weaklyHypometh 1 1 insignificant -0.02830298 0.064979 lowCoverage 1 lowCoverage 0.87380 0.83051 0.0430266 5 0.87639 0.84179 0.0346009 8.3224e-04 0.08921 weaklyHypermeth 8.3224e-02 1 weaklyHypermeth 7.6565e-03 0.017231 weaklyHypermeth 7.6565e-01 1 insignificant 0.036585 1.8345e-01 lowCoverage 1.000000 lowCoverage 0.87380 0.92776 -0.0566032 5 0.87639 0.93245 -0.05605223 0.99999 1.2067e-06 weaklyHypometh 1 0.0012067 weaklyHypometh 0.99970 3.4361e-05 weaklyHypometh 1 0.034361 weaklyHypometh -0.030259 0.2096005 lowCoverage 1 lowCoverage 0.90704 0.83051 0.0748201 5 0.90889 0.84179 0.0670954 1.2876e-04 0.872459 weaklyHypermeth 1.2876e-02 1 weaklyHypermeth 2.9543e-02 0.282330 weaklyHypermeth 1.0000e+00 1 insignificant 0.064888 3.7079e-02 lowCoverage 1.000000 lowCoverage 0.90712 0.92711 -0.023935 5 0.93492 0.80889 0.126030 0.99797 0.080043 insignificant 1 1 insignificant 0.98332 0.129757 insignificant 1 1 insignificant -0.0019560 0.9339005 insignificant 1 insignificant 0.83051 0.92776 -0.099695 5 0.84179 0.93245 -0.090653 0.99286 2.2449e-04 weaklyHypometh 1 5.2675e-02 weaklyHypometh 0.87924 3.7158e-02 weaklyHypometh 1 1.00000000 insignificant -0.066844 5.3952e-02 lowCoverage 1.0000000 lowCoverage chr4 72308328 72309328 46866 SLC4A4 ENSG00000080493 0.94503 262 7 0.82227 178 5 0.89417 230 7 0.91019 199 4 0.93084 116 5 0.87209 307 7 0.87057 200 5 0.94890 227 6 0.83797 183 5 0.96797 175 5 0.84840 165 6 0.84607 143 5 0.87921 172 5 0.97581 95 3 0.96802 245 5 0.78571 49 5 0.88501 64 5 0.96366 326 5 0.91108 149 5 0.91586 282 7 0.97917 53 6 0.87781 120 6 0.83745 185 6 0.86797 61 5 0.9600 41 5 0.95842 206 5 0.93279 124 6 0.88837 74 5 0.79273 164 5 0.80727 251 5 0.95728 205 7 0.92611 308 7 0.92363 161 6 0.90714 84 4 1.00000 141 5 0.96667 25 2 0.83826 164 6 0.90753 232 5 0.92199 377 5 0.98634 246 5 0.94875 230 5 0.94334 212 5 0.95010 243 5 0.92863 0.95061 0.90432 0.97075 0.91228 0.92864 0.93063 0.96791 0.89238 0.96017 0.95092 0.90543 0.96541 0.95343 0.95041 0.89442 0.82959 0.95854 0.93663 0.95937 0.98705 0.93278 0.91632 0.94700 0.95777 0.94837 0.96776 0.92332 0.95366 0.93111 0.96288 0.93370 0.92740 0.98543 1.00000 0.97928 0.94527 0.86537 0.95690 0.98137 0.95133 0.94808 0.95199 5 0.93417 0.93527 -0.0050331 5 0.89947 0.90953 -0.010061 0.77543 0.27629710 insignificant 1 1.00000 insignificant 0.85127 0.128781 insignificant 1 1 insignificant 0.00016031 0.994231 insignificant 1 insignificant 0.93417 0.93556 -0.0027424 5 0.89947 0.90692 -0.0074479 6.8238e-01 0.07253 insignificant 1.0000e+00 1 insignificant 9.9772e-01 0.010838 weaklyHypometh 1.0000e+00 1 insignificant -0.024930 3.6122e-01 lowCoverage 1.000000 lowCoverage 0.93489 0.96024 -0.0207089 5 0.90272 0.93584 -0.03312192 0.91971 3.2440e-02 weaklyHypometh 1 1.0000000 insignificant 0.87455 3.7021e-02 weaklyHypometh 1 1.000000 insignificant -0.051165 0.0054525 weaklyHypometh 1 insignificant 0.93527 0.93556 0.0016190 5 0.90953 0.90692 0.0026134 4.9881e-01 0.081601 insignificant 1.0000e+00 1 insignificant 9.4716e-01 0.086719 insignificant 1.0000e+00 1 insignificant -0.025090 4.0722e-01 lowCoverage 1.000000 lowCoverage 0.93497 0.96024 -0.017821 5 0.90300 0.93584 -0.032837 0.98765 0.053250 insignificant 1 1 insignificant 0.92633 0.134075 insignificant 1 1 insignificant -0.0513251 0.0273490 weaklyHypometh 1 insignificant 0.93703 0.96024 -0.020505 5 0.91705 0.93584 -0.018792 0.16094 3.4039e-01 insignificant 1 1.0000e+00 insignificant 0.20139 7.8434e-01 insignificant 1 1.00000000 insignificant -0.026235 3.2901e-01 lowCoverage 1.0000000 lowCoverage chr4 79370246 79371246 47048 ENSG00000221183 0.69428 138 5 0.79136 98 5 0.84510 114 5 0.48933 142 4 0.92197 41 5 0.70490 201 5 0.89256 116 5 0.87179 42 5 0.78874 49 5 0.94983 76 5 0.83993 204 5 0.95778 62 5 0.88938 43 3 NA 0 0 0.93253 97 5 0.84747 66 5 0.93952 58 5 0.64073 114 4 0.74027 84 5 0.72632 198 5 0.80667 46 4 0.64594 74 4 0.76338 115 5 0.81070 57 5 0.53280 44 4 0.75305 84 5 0.82688 59 5 0.86833 30 3 0.66341 68 4 0.81751 89 5 0.73820 67 5 0.71924 254 5 0.80768 81 5 0.78415 149 5 0.83049 90 4 0.75333 21 2 0.89143 50 5 0.68682 101 5 0.79375 167 5 0.76850 104 5 0.72132 159 5 0.71515 71 4 0.69663 124 4 0.67452 0.77222 0.81515 0.59180 0.90217 0.66673 0.87915 0.80866 0.75822 0.93601 0.80794 0.95735 0.87434 NA 0.93379 0.82326 0.95251 0.57095 0.72159 0.68397 0.77765 0.53856 0.72406 0.71893 0.52626 0.77961 0.81742 0.83145 0.71188 0.81461 0.69300 0.69400 0.77101 0.71622 0.77836 0.56513 0.88571 0.66476 0.78559 0.75916 0.69794 0.69531 0.62315 2 0.76994 0.71935 0.048964 5 0.78038 0.73175 0.048624 0.014833 0.997043 weaklyHypermeth 1 1 insignificant 0.04291 0.9924157 weaklyHypermeth 1 1 insignificant 0.0683739 0.0929365 lowCoverage 1 lowCoverage 0.76994 0.76626 0.0015289 5 0.78038 0.80243 -0.022056 0.19641099 0.38458 insignificant 1.000000 1 insignificant 0.588906 0.72298 insignificant 1 1 insignificant 0.021564 0.59859 lowCoverage 1 lowCoverage 0.76994 0.70400 0.045275 5 0.78038 0.74268 0.037700 0.36273 0.11828757 insignificant 1 1.00000 insignificant 0.068616 0.0391187 inconclusive 1 1.00000 insignificant 0.074814 0.03745060 lowCoverage 1.00000 lowCoverage 0.71935 0.76626 -0.045678 5 0.73175 0.80243 -0.070680 0.90162891 0.033751 weaklyHypometh 1.000000 1 insignificant 0.85687332 0.26410 insignificant 1.00000 1 insignificant -0.046809 0.25517 lowCoverage 1 lowCoverage 0.71935 0.70400 -0.005280 5 0.73175 0.74268 -0.010924 0.37122 0.0076805 weaklyHypometh 1 1.00000 insignificant 0.22196 0.020629 weaklyHypometh 1 1 insignificant 0.0064398 0.84652 lowCoverage 1 lowCoverage 0.76626 0.70400 0.040859 5 0.80243 0.74268 0.059757 0.019105 0.06722349 weaklyHypermeth 1 1.000000 insignificant 0.15986 0.1015794 insignificant 1 1.00000 insignificant 0.053249 0.1517439 lowCoverage 1 lowCoverage chr4 80295271 80296271 47098 PAQR3 ENSG00000163291 0.75267 421 11 0.77288 219 11 0.78588 184 11 0.82771 277 11 0.87288 93 9 0.77795 408 11 0.86582 153 11 0.73650 216 10 0.80182 152 11 0.81819 148 10 0.79017 360 11 0.88832 106 9 0.75525 202 11 0.90104 61 3 0.83936 232 11 0.74216 146 11 0.79931 84 6 0.82145 248 11 0.86457 194 11 0.83127 418 11 0.97521 56 5 0.88814 121 10 0.66696 201 10 0.82855 101 9 0.88656 95 9 0.81747 211 11 0.77775 123 5 0.69105 95 6 0.84264 133 11 0.82586 244 11 0.81093 212 11 0.80921 473 11 0.82861 177 9 0.75070 139 8 0.78072 215 11 0.72017 86 5 0.82558 126 9 0.69664 253 11 0.88346 350 11 0.81294 334 11 0.87697 316 11 0.86872 283 7 0.86539 345 11 0.81599 0.78560 0.79946 0.87051 0.91781 0.81774 0.91560 0.85398 0.84431 0.86884 0.81190 0.89453 0.88887 0.8724 0.88671 0.81575 0.81970 0.87173 0.89739 0.86093 0.95998 0.88467 0.72512 0.86464 0.88109 0.88385 0.83170 0.81066 0.89485 0.86115 0.84871 0.84558 0.80240 0.81902 0.87170 0.79510 0.82131 0.88351 0.90998 0.87849 0.91123 0.86395 0.91669 5 0.83503 0.83971 -0.008112 11 0.78021 0.79423 -0.014019 0.268808 0.134343 insignificant 1 1 insignificant 0.65863 0.2094901 insignificant 1 1 insignificant -0.0061012 0.8200085 insignificant 1 insignificant 0.83503 0.80422 0.0174579 11 0.78021 0.75466 0.025551 0.05600905 0.91067 insignificant 1.000000 1 insignificant 0.195784 0.86296 insignificant 1 1 insignificant 0.045190 0.10778 insignificant 1 insignificant 0.83503 0.89005 -0.044116 11 0.78021 0.87313 -0.092913 0.98439 0.00043931 weaklyHypometh 1 0.14644 insignificant 0.998791 0.0039191 weaklyHypometh 1 0.65318 insignificant -0.049235 0.01304270 weaklyHypometh 1.00000 insignificant 0.83971 0.80422 0.027962 11 0.79423 0.75466 0.039570 0.05918928 0.937101 insignificant 1.000000 1 insignificant 0.22591100 0.96436 insignificant 1.00000 1 insignificant 0.051291 0.13819 insignificant 1 insignificant 0.83971 0.89005 -0.038017 11 0.79423 0.87313 -0.078894 0.98293 0.0011636 weaklyHypometh 1 0.38786 insignificant 0.99198 0.049779 weaklyHypometh 1 1 insignificant -0.0431343 0.13189 insignificant 1 insignificant 0.80422 0.89005 -0.067628 11 0.75466 0.87313 -0.118464 0.997258 0.00250801 weaklyHypometh 1 0.278667 insignificant 0.99842 0.0251313 weaklyHypometh 1 1.00000 insignificant -0.094425 0.0064509 weaklyHypometh 1 insignificant chr4 87918750 87919750 47645 PTPN13 ENSG00000163629 0.79040 271 7 0.77412 81 4 0.78885 136 7 0.74797 99 7 0.80913 35 3 0.81921 218 7 0.75221 80 7 0.77183 62 3 0.77202 58 3 0.72255 59 3 0.87122 135 7 0.77755 58 7 0.83960 74 7 NA 0 0 0.78664 107 7 0.73449 52 4 0.60451 74 7 0.84445 181 7 0.84694 78 7 0.80365 157 7 0.88889 29 3 0.80736 49 3 0.79509 97 7 0.88520 35 3 0.82576 50 5 0.74821 131 7 0.89545 47 4 0.82937 34 3 0.86823 63 7 0.85685 114 7 0.81317 144 7 0.81102 274 7 0.74459 44 4 0.66190 49 6 0.64746 118 7 0.86905 67 7 0.79252 31 3 0.73853 122 7 0.81610 241 7 0.84364 254 7 0.86973 204 7 0.88406 195 7 0.86273 174 7 0.79481 0.74900 0.75865 0.76869 0.85924 0.82236 0.78445 0.76155 0.79930 0.79855 0.85450 0.77119 0.86153 NA 0.75955 0.71343 0.63829 0.83942 0.85127 0.77134 0.88421 0.84257 0.84375 0.81701 0.82184 0.79293 0.86897 0.80041 0.86521 0.81692 0.81600 0.77779 0.68178 0.67622 0.61674 0.78699 0.76619 0.75058 0.83376 0.84952 0.88574 0.88027 0.84522 3 0.79603 0.82099 -0.025783 7 0.79727 0.82258 -0.025309 0.853308 0.012950 weaklyHypometh 1 1 insignificant 0.99422 0.0013242 weaklyHypometh 1 1 insignificant -0.0534183 0.0076407 weaklyHypometh 1 insignificant 0.79603 0.71694 0.0760053 7 0.79727 0.73768 0.059593 0.00046227 0.88884 weaklyHypermeth 0.057784 1 weaklyHypermeth 0.020065 0.89233 weaklyHypermeth 1 1 insignificant 0.039623 0.31260 insignificant 1 insignificant 0.79603 0.85487 -0.059163 7 0.79727 0.85256 -0.055287 0.99930 0.00102780 weaklyHypometh 1 0.25695 insignificant 0.999174 0.0010164 weaklyHypometh 1 0.33879 insignificant -0.073288 0.00088703 weaklyHypometh 0.15865 insignificant 0.82099 0.71694 0.101074 7 0.82258 0.73768 0.084902 0.00013619 0.968277 weaklyHypermeth 0.019456 1 weaklyHypermeth 0.00144410 0.99726 weaklyHypermeth 0.24068 1 insignificant 0.093041 0.03891 weaklyHypermeth 1 insignificant 0.82099 0.85487 -0.034497 7 0.82258 0.85256 -0.029978 0.94564 0.1162027 insignificant 1 1.00000 insignificant 0.82996 0.532944 insignificant 1 1 insignificant -0.0198702 0.27455 insignificant 1 insignificant 0.71694 0.85487 -0.136532 7 0.73768 0.85256 -0.114881 0.999162 0.00024557 weaklyHypometh 1 0.061393 weaklyHypometh 0.99702 0.0012209 weaklyHypometh 1 0.30207 insignificant -0.112911 0.0187212 weaklyHypometh 1 insignificant chr4 94125599 94126599 47799 ENSG00000211179 0.76062 95 5 0.69397 151 5 0.73469 44 5 0.75000 94 5 0.72538 45 4 0.45640 135 5 0.64143 35 4 0.71997 112 5 0.70000 24 1 0.70972 52 5 0.60325 183 5 0.30556 15 1 0.65007 84 5 0.77841 57 5 0.59914 56 5 0.20000 7 0 NA 0 0 0.76144 100 5 0.59609 53 5 0.76630 194 5 0.55000 12 0 0.86667 32 5 0.61111 55 5 0.82000 20 1 0.76667 31 4 0.75956 214 5 0.77394 65 5 0.33333 11 1 0.59285 99 5 0.75292 212 5 0.74939 201 5 0.65080 147 5 0.64050 91 5 0.59848 79 5 0.53000 111 5 1.00000 1 0 0.42262 35 5 0.74898 216 5 0.74575 103 5 0.75727 104 5 0.76163 110 5 0.60000 42 5 0.70702 114 5 0.74836 0.68962 0.64156 0.78877 0.66405 0.77033 0.67403 0.74943 0.76364 0.76452 0.76576 0.45758 0.69962 0.6876 0.68244 0.18182 NA 0.75455 0.69361 0.75991 0.65455 0.90303 0.76364 0.78545 0.83030 0.80190 0.90569 NA 0.72058 0.80298 0.79785 0.75167 0.61337 0.53329 0.46000 NA 0.55649 0.72914 0.79715 0.80267 0.75820 0.66545 0.69989 0 0.70443 0.74977 -0.046298 5 0.66091 0.52311 0.137803 0.452190 0.082043 insignificant 1 1 insignificant 0.76907 0.0143364 weaklyHypometh 1 1 insignificant -0.0460014 0.4184453 lowCoverage 1 lowCoverage 0.70419 0.59475 0.1105186 5 0.65845 0.56595 0.092498 0.00742608 0.88774 weaklyHypermeth 0.618840 1 insignificant 0.067204 0.96138 insignificant 1 1 insignificant -0.017162 0.85344 lowCoverage 1 lowCoverage 0.70446 0.75264 -0.017826 5 0.68486 0.75711 -0.072256 0.91927 0.29798583 insignificant 1 1.00000 insignificant 0.977205 0.0861952 insignificant 1 1.00000 insignificant -0.074731 0.13333603 lowCoverage 1.00000 lowCoverage 0.75068 0.59475 0.155489 5 0.53302 0.56595 -0.032935 0.00043410 1.000000 weaklyHypermeth 0.054263 1 weaklyHypermeth 0.00050262 0.88120 weaklyHypermeth 0.10052 1 insignificant 0.028839 0.76253 lowCoverage 1 lowCoverage 0.75137 0.75264 0.030073 5 0.62185 0.75711 -0.135261 0.21553 0.9026670 insignificant 1 1.00000 insignificant 0.14967 0.475019 insignificant 1 1 insignificant -0.0287298 0.58909 lowCoverage 1 lowCoverage 0.59586 0.75264 -0.128406 5 0.66028 0.75711 -0.096836 0.995240 0.08648207 insignificant 1 1.000000 insignificant 0.99983 0.0375901 weaklyHypometh 1 1.00000 insignificant -0.057569 0.5325286 lowCoverage 1 lowCoverage chr4 100789779 100790779 48220 MTTP ENSG00000138823 0.82148 379 6 0.91163 371 6 0.90984 333 6 0.95975 334 9 0.87475 165 6 0.93762 338 6 0.88887 308 6 0.90393 243 6 0.91398 306 6 0.93230 265 6 0.90466 251 6 0.94138 178 6 0.93801 283 6 NA 0 0 0.91762 205 6 0.91893 95 6 0.85143 114 6 0.75778 296 6 0.89462 210 6 0.93082 237 6 0.82106 51 4 0.95014 92 4 0.89229 271 6 0.93579 108 6 0.95000 60 4 0.96430 355 6 0.92122 85 6 0.96818 93 6 0.93915 301 6 0.96413 423 6 0.97135 416 6 0.98284 278 5 0.75804 356 6 0.77275 235 6 0.74000 79 3 0.77652 33 2 0.82921 141 6 0.74124 392 8 0.94754 492 6 0.97570 379 6 0.92780 316 5 0.97610 365 6 0.93570 370 5 0.93693 0.89702 0.91102 0.94078 0.84562 0.94485 0.90663 0.90337 0.91086 0.93683 0.91664 0.92836 0.92971 NA 0.92668 0.96422 0.79163 0.93267 0.91932 0.93504 0.79995 0.95486 0.96763 0.92024 0.95766 0.95196 0.95686 0.99310 0.93198 0.92962 0.95323 0.97270 0.71147 0.76421 0.83832 0.75034 0.82579 0.82491 0.94488 0.94599 0.93562 0.96366 0.95179 4 0.92158 0.94868 -0.02749653 6 0.90222 0.95989 -0.0576663 0.99998 0.0012418 weaklyHypometh 1 1 insignificant 1.00000 0.0003173 weaklyHypometh 1 0.3173 insignificant -0.037877 0.033781 weaklyHypometh 1 insignificant 0.92120 0.78074 0.140442 6 0.81508 0.70991 0.105172 1.5193e-16 0.99995 weaklyHypermeth 7.5967e-14 1 weaklyHypermeth 1.5334e-05 0.99996 weaklyHypermeth 0.0051113 1 weaklyHypermeth 0.130869 5.8449e-06 weaklyHypermeth 0.0058449 weaklyHypermeth 0.92156 0.94485 -0.028908 5 0.90926 0.93446 -0.025202 9.9834e-01 0.00155495 weaklyHypometh 1.0000e+00 0.388737 insignificant 1.0000e+00 4.5562e-04 weaklyHypometh 1.00000000 0.113906 insignificant -0.052073 3.2740e-03 weaklyHypometh 0.545672 insignificant 0.94868 0.78194 0.169787 6 0.95989 0.74387 0.21602 1.3455e-14 1.00000 weaklyHypermeth 6.7276e-12 1 weaklyHypermeth 7.8983e-07 1.00000 weaklyHypermeth 0.0006355 1 weaklyHypermeth 0.168746 4.6901e-07 weaklyHypermeth 0.00046901 weaklyHypermeth 0.94868 0.94514 -0.00014896 5 0.95989 0.93802 0.0218678 8.4479e-01 2.7318e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7412e-01 0.38950055 insignificant 1.0000000 1.00000 insignificant -0.0141959 3.9809e-01 insignificant 1.000000 insignificant 0.78247 0.94485 -0.172781 5 0.78656 0.93446 -0.147903 0.99997 1.3524e-08 weaklyHypometh 1 3.3811e-06 weaklyHypometh 1.00000 9.5229e-06 weaklyHypometh 1 0.00317431 weaklyHypometh -0.182942 2.2148e-06 weaklyHypometh 0.0022148 weaklyHypometh chr4 109540205 109541205 48595 LEF1 ENSG00000138795 0.86161 164 4 0.72059 142 6 0.84890 104 6 0.98699 178 3 0.73611 60 3 0.79141 292 6 0.87127 69 3 0.86923 96 2 0.67294 71 2 0.81481 28 2 0.82434 286 7 0.66667 9 0 0.95512 75 6 0.93202 65 3 0.94792 102 3 0.00000 2 0 NA 0 0 0.71083 156 3 0.97439 270 3 0.69286 219 5 0.87959 39 6 0.00000 3 0 0.82986 204 6 0.92361 76 7 0.62500 7 0 0.87877 191 7 0.74029 148 6 0.75476 44 3 0.87120 245 3 0.98697 189 7 0.81905 258 7 0.76154 317 6 0.63471 196 7 0.59529 141 3 0.81536 430 6 1.00000 2 0 0.56533 124 7 0.67427 253 7 0.88559 261 6 0.57149 140 5 0.91908 188 3 0.91788 196 2 0.86428 145 6 0.93244 0.82725 0.73077 0.96581 0.94444 0.92556 0.89737 0.94103 0.85215 0.94444 0.95278 0.50000 0.94868 0.87500 0.87500 NA NA 0.71625 0.95258 0.92503 1.00000 NA 0.93960 0.86111 0.75000 0.88542 0.90371 0.68810 0.90207 0.95875 0.94068 0.95355 0.79012 0.84486 0.83043 NA 0.74496 0.96552 0.83858 0.74326 0.87148 0.87681 0.84934 0 0.89531 0.90872 -0.01466697 3 0.80342 0.81756 -0.0141409 0.77440 0.4698606 lowCoverage 1 1 lowCoverage 0.13033 0.5667681 lowCoverage 1 1.0000 lowCoverage 0.027166 0.763646 lowCoverage 1 lowCoverage 0.89531 0.71241 0.136671 3 0.80342 0.63140 0.172014 1.7832e-06 0.99719 lowCoverage 1.7832e-04 1 lowCoverage 9.5290e-05 0.99947 lowCoverage 0.0190580 1 lowCoverage 0.068894 4.2790e-01 lowCoverage 1.0000000 lowCoverage 0.89531 0.84086 0.056296 3 0.80342 0.83843 -0.035013 1.4682e-01 0.72041734 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.3424e-02 9.1108e-01 lowCoverage 1.00000000 1.000000 lowCoverage -0.048610 5.6988e-01 lowCoverage 1.000000 lowCoverage 0.90877 0.71179 0.192092 6 0.83783 0.56125 0.27658 2.5933e-05 0.99962 weaklyHypermeth 2.5933e-03 1 weaklyHypermeth 1.4999e-02 0.99947 weaklyHypermeth 1.0000000 1 insignificant 0.041728 6.8280e-01 lowCoverage 1.00000000 lowCoverage 0.90872 0.84086 0.07018225 6 0.81756 0.83843 -0.0208718 6.3344e-03 7.5608e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 5.4652e-02 0.73213840 insignificant 1.0000000 1.00000 insignificant -0.0757763 4.5810e-01 lowCoverage 1.000000 lowCoverage 0.71241 0.84086 -0.082944 6 0.63140 0.83843 -0.207027 0.98660 2.2569e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.99784 1.5570e-01 insignificant 1 1.00000000 insignificant -0.117504 2.4400e-01 lowCoverage 1.0000000 lowCoverage chr4 113133222 113134222 48872 ENSG00000200963 0.98974 60 4 0.86461 240 5 0.65333 44 5 0.99375 60 4 0.90000 56 3 0.97574 109 5 0.81667 59 5 0.91800 86 4 0.87500 28 3 0.95000 14 0 0.91676 248 5 0.81000 24 4 0.97727 40 3 0.86667 15 3 1.00000 40 3 1.00000 4 0 0.79310 58 1 0.91667 11 0 1.00000 18 3 0.90893 59 5 0.95000 29 3 1.00000 8 0 0.89030 51 5 0.81545 50 5 1.00000 8 0 0.93533 156 5 0.80571 23 3 1.00000 3 0 0.95000 19 2 0.95990 151 5 0.92512 189 5 0.90800 149 5 0.56304 79 5 0.90000 27 3 1.00000 207 5 0.62500 8 1 0.66667 63 5 0.66924 126 5 0.95322 191 5 0.89707 157 5 0.87186 259 4 1.00000 1 0 0.96109 143 4 1.00000 0.88091 0.66667 1.00000 0.91667 1.00000 0.88889 0.94667 0.79167 1.00000 0.93865 1.00000 0.96970 0.86667 1.00000 1.00000 NA 0.88889 1.00000 0.91667 1.00000 1.00000 0.88384 0.72576 1.00000 0.96514 0.86667 1.00000 1.00000 0.96346 0.95700 0.89506 0.62500 1.00000 1.00000 NA 0.68056 0.75387 0.95833 0.97531 0.93939 NA 0.95556 0 0.89788 0.92216 -0.02045114 4 0.89456 0.91710 -0.0225394 0.95791 0.1764262 lowCoverage 1 1 lowCoverage 0.78334 0.6218011 lowCoverage 1 1.0000 lowCoverage -0.022006 0.429817 lowCoverage 1 lowCoverage 0.89788 0.80784 0.100331 4 0.89456 0.79739 0.097167 4.8300e-03 0.99758 lowCoverage 3.2200e-01 1 lowCoverage 8.1382e-03 0.99976 lowCoverage 0.6781851 1 lowCoverage 0.168986 6.1216e-02 lowCoverage 1.0000000 lowCoverage 0.89788 0.92144 -0.037200 4 0.89456 0.92143 -0.026878 9.5217e-01 0.11942679 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.0922e-01 6.6829e-01 lowCoverage 1.00000000 1.000000 lowCoverage -0.030337 3.4164e-01 lowCoverage 1.000000 lowCoverage 0.92216 0.80784 0.113401 5 0.91710 0.79739 0.11971 3.6498e-03 0.99785 weaklyHypermeth 2.8075e-01 1 insignificant 1.3339e-02 0.99976 weaklyHypermeth 1.0000000 1 insignificant 0.190992 4.1011e-02 lowCoverage 1.00000000 lowCoverage 0.92216 0.92144 -0.01450623 5 0.91710 0.92143 -0.0043382 8.5358e-01 3.0718e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1206e-01 0.50218455 insignificant 1.0000000 1.00000 insignificant -0.0083302 7.8586e-01 lowCoverage 1.000000 lowCoverage 0.80784 0.92144 -0.129965 5 0.79739 0.92143 -0.124045 0.99155 4.0549e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.99858 9.0957e-02 insignificant 1 1.00000000 insignificant -0.199323 3.5509e-02 lowCoverage 1.0000000 lowCoverage chr4 114021863 114022863 48916 ENSG00000188258 0.82647 317 6 0.81827 535 7 0.50343 331 6 0.74352 269 4 0.78692 251 6 0.89085 514 6 0.87663 286 6 0.78184 386 6 0.82511 272 6 0.88371 212 6 0.87307 572 6 0.76879 139 6 0.45806 267 6 0.73915 189 5 0.73493 329 6 0.97032 101 6 0.49702 26 1 0.70860 336 5 0.56518 401 5 0.81296 216 5 0.79232 65 5 0.63128 140 6 0.82897 224 6 0.70987 194 6 0.71251 49 4 0.77104 510 6 0.80386 289 6 0.72159 82 5 0.84641 379 6 0.83812 690 6 0.74295 507 6 0.88724 377 6 0.67840 433 7 0.57577 109 5 0.26975 461 4 0.72222 15 0 0.49780 345 6 0.80411 366 6 0.52910 377 5 0.56683 253 4 0.45370 362 4 0.61186 222 5 0.56421 320 6 0.74819 0.72409 0.57633 0.70734 0.75972 0.82864 0.81358 0.75953 0.74497 0.83180 0.84644 0.74098 0.34552 0.69979 0.66939 0.97440 0.23142 0.67455 0.58541 0.75432 0.85271 0.32337 0.82194 0.66231 0.74361 0.69853 0.73886 0.89777 0.76870 0.73505 0.70365 0.84172 0.61600 0.43600 0.23333 0.65180 0.40781 0.75298 0.35395 0.57729 0.32938 0.50021 0.42502 4 0.72550 0.73759 -0.01239723 6 0.82071 0.80496 0.0157465 0.74793 0.4153569 insignificant 1 1 insignificant 0.87795 0.3586013 insignificant 1 1.0000 insignificant -0.020605 0.593655 insignificant 1 insignificant 0.72541 0.53094 0.196283 6 0.79830 0.60441 0.193894 1.8939e-07 0.99958 weaklyHypermeth 2.7055e-05 1 weaklyHypermeth 2.0598e-04 0.99788 weaklyHypermeth 0.0294261 1 weaklyHypermeth 0.161899 9.7530e-02 lowCoverage 1.0000000 lowCoverage 0.72550 0.37704 0.316689 5 0.82071 0.49106 0.329652 1.5645e-13 0.99857368 hypermethylated 1.5645e-10 1.000000 hypermethylated 8.2853e-07 8.3643e-01 hypermethylated 0.00082853 1.000000 hypermethylated 0.208101 1.0812e-04 lowCoverage 0.054058 lowCoverage 0.73752 0.53094 0.205575 6 0.78059 0.60441 0.17618 1.4452e-06 0.99999 hypermethylated 1.8065e-04 1 hypermethylated 1.3086e-03 0.99995 weaklyHypermeth 0.1869376 1 insignificant 0.182504 6.6545e-02 lowCoverage 1.00000000 lowCoverage 0.73759 0.37704 0.33220145 5 0.80496 0.49106 0.3139056 8.7426e-13 9.4725e-01 hypermethylated 8.7426e-10 1.000000 hypermethylated 3.6906e-06 0.79341220 hypermethylated 0.0036906 1.00000 hypermethylated 0.2287067 6.7758e-05 lowCoverage 0.033879 lowCoverage 0.53094 0.37911 0.114022 5 0.60441 0.54108 0.063328 0.15031 3.4486e-01 insignificant 1 1.0000e+00 insignificant 0.24129 2.7299e-01 insignificant 1 1.00000000 insignificant 0.046202 5.9456e-01 lowCoverage 1.0000000 lowCoverage chr4 115970841 115971841 48974 ENSG00000209239,ENSG00000222595 0.86550 412 13 0.74811 327 12 0.73844 165 11 0.86855 162 12 0.79836 107 11 0.78178 313 12 0.69461 89 9 0.73256 189 12 0.72102 165 12 0.84392 152 11 0.84588 398 12 0.85247 84 7 0.83142 283 12 0.92857 14 1 0.92779 139 12 0.85364 90 7 0.67569 83 9 0.91852 200 12 0.80682 321 13 0.86645 316 13 0.79473 193 11 0.72831 89 7 0.85844 255 13 0.82111 257 11 0.85385 111 8 0.89764 384 12 0.79227 265 13 0.81901 152 8 0.83370 224 12 0.84829 351 12 0.87380 345 9 0.78910 348 12 0.73317 223 9 0.64400 209 13 0.81548 287 12 0.80194 111 8 0.71629 200 11 0.76333 444 12 0.90688 283 11 0.88316 377 13 0.90398 227 10 0.89561 316 13 0.88513 266 13 0.86429 0.79124 0.73752 0.85002 0.81592 0.75469 0.75901 0.74375 0.71321 0.83165 0.82884 0.85281 0.84890 NA 0.90838 0.81318 0.68017 0.91114 0.79119 0.84389 0.78612 0.77872 0.84055 0.81028 0.90950 0.87167 0.78509 0.84926 0.80235 0.85041 0.86964 0.78845 0.70560 0.62055 0.78292 0.78405 0.72513 0.77040 0.89615 0.86857 0.90716 0.89937 0.87962 6 0.84211 0.84566 -0.00047148 12 0.83047 0.82242 0.0080533 0.58917 0.1904926 insignificant 1 1 insignificant 0.86870 0.1437189 insignificant 1 1.0000 insignificant -0.010847 0.618520 insignificant 1 insignificant 0.84211 0.77273 0.083478 12 0.83047 0.73783 0.092643 8.3119e-09 0.99998 weaklyHypermeth 2.0780e-06 1 weaklyHypermeth 5.9192e-05 0.99875 weaklyHypermeth 0.0147981 1 weaklyHypermeth 0.069303 4.8370e-02 weaklyHypermeth 1.0000000 insignificant 0.84211 0.88496 -0.062912 12 0.83047 0.89407 -0.063599 9.9996e-01 0.00040452 weaklyHypometh 1.0000e+00 0.134839 insignificant 1.0000e+00 2.9092e-05 weaklyHypometh 1.00000000 0.010403 weaklyHypometh -0.079949 1.8266e-04 weaklyHypometh 0.060887 weaklyHypometh 0.84566 0.77273 0.081562 13 0.82242 0.73783 0.08459 3.0687e-08 1.00000 weaklyHypermeth 7.6718e-06 1 weaklyHypermeth 3.1256e-05 0.99998 weaklyHypermeth 0.0078140 1 weaklyHypermeth 0.080150 2.4641e-02 weaklyHypermeth 1.00000000 insignificant 0.84566 0.88496 -0.07657885 13 0.82242 0.89407 -0.0716522 9.9313e-01 6.9241e-05 weaklyHypometh 1.0000e+00 0.034620 weaklyHypometh 9.9987e-01 0.00078312 weaklyHypometh 1.0000000 0.39156 insignificant -0.0691025 2.4831e-04 weaklyHypometh 0.082768 weaklyHypometh 0.77273 0.88496 -0.155745 13 0.73783 0.89407 -0.156242 1.00000 4.2828e-13 weaklyHypometh 1 2.1414e-10 weaklyHypometh 1.00000 2.7212e-07 weaklyHypometh 1 0.00018739 weaklyHypometh -0.149252 1.8227e-03 weaklyHypometh 0.6075545 insignificant chr4 115971085 115972085 48975 ENSG00000209239,ENSG00000222595 0.83107 478 18 0.74183 403 17 0.72622 213 16 0.84652 261 17 0.77867 145 16 0.79325 470 17 0.73579 120 14 0.70840 257 17 0.69583 213 17 0.81035 185 16 0.83818 571 17 0.80827 101 8 0.82904 344 17 0.65385 52 6 0.87009 207 17 0.73319 111 8 0.69318 95 9 0.88804 313 17 0.82988 376 18 0.88192 419 18 0.78508 217 14 0.77085 134 12 0.78248 288 15 0.77338 298 16 0.80149 144 12 0.85006 488 17 0.79230 304 17 0.80019 161 9 0.81308 302 17 0.75647 484 17 0.84113 416 14 0.80390 522 17 0.72578 310 14 0.68180 269 18 0.81241 338 17 0.82918 121 8 0.60412 232 12 0.76890 522 17 0.86905 377 16 0.87545 508 18 0.89087 358 15 0.85285 372 18 0.85890 373 18 0.83847 0.77476 0.73467 0.83655 0.79976 0.76677 0.77520 0.73106 0.69816 0.80433 0.82674 0.81948 0.84095 0.77912 0.86517 0.73013 0.69991 0.88847 0.80498 0.85462 0.77483 0.79710 0.78791 0.77798 0.88578 0.83874 0.78432 0.81256 0.79090 0.80974 0.83921 0.80133 0.70337 0.65763 0.78694 0.81136 0.63617 0.75134 0.87226 0.86657 0.89638 0.86671 0.85720 7 0.82546 0.82592 0.00593071 17 0.80860 0.74717 0.0614327 0.47749 0.4402910 insignificant 1 1 insignificant 0.84272 0.3721708 insignificant 1 1.0000 insignificant -0.012856 0.466560 insignificant 1 insignificant 0.82546 0.76172 0.079599 17 0.80860 0.75743 0.051173 2.7239e-08 1.00000 weaklyHypermeth 5.4479e-06 1 weaklyHypermeth 9.6161e-04 0.99960 weaklyHypermeth 0.1202017 1 insignificant 0.047646 2.4902e-01 insignificant 1.0000000 insignificant 0.82552 0.86670 -0.057734 17 0.81511 0.87238 -0.057272 9.9999e-01 0.00013316 weaklyHypometh 1.0000e+00 0.066578 weaklyHypometh 1.0000e+00 1.7457e-05 weaklyHypometh 1.00000000 0.010403 weaklyHypometh -0.084746 4.3576e-05 weaklyHypometh 0.043576 weaklyHypometh 0.82592 0.76172 0.073634 18 0.74717 0.75743 -0.01026 3.7103e-07 1.00000 weaklyHypermeth 5.3005e-05 1 weaklyHypermeth 7.3395e-04 0.99996 weaklyHypermeth 0.1223243 1 insignificant 0.060502 1.4390e-01 insignificant 1.00000000 insignificant 0.82632 0.86670 -0.07407338 18 0.80241 0.87238 -0.0699750 9.9975e-01 1.0168e-05 weaklyHypometh 1.0000e+00 0.010168 weaklyHypometh 1.0000e+00 0.00026591 weaklyHypometh 1.0000000 0.26591 insignificant -0.0718894 8.1770e-06 weaklyHypometh 0.008177 weaklyHypometh 0.76145 0.86670 -0.146180 18 0.73048 0.87238 -0.141908 1.00000 5.8629e-14 weaklyHypometh 1 5.8629e-11 weaklyHypometh 1.00000 3.7477e-07 weaklyHypometh 1 0.00018739 weaklyHypometh -0.132392 1.1658e-02 weaklyHypometh 1.0000000 insignificant chr4 117738835 117739835 49041 ENSG00000213493 0.94644 311 7 0.95022 89 6 0.89333 55 5 0.97564 225 7 0.95960 51 4 0.83471 290 7 0.96703 56 4 0.92778 71 4 0.85833 54 4 0.98039 106 4 0.80773 157 7 0.83333 28 4 0.84694 93 4 0.96429 42 4 0.90844 59 5 0.86000 51 4 1.00000 24 3 0.93758 308 7 0.90344 100 7 0.94675 191 7 1.00000 29 2 0.94658 88 6 0.97292 70 4 0.87273 39 3 0.94686 248 7 0.97578 120 6 0.93540 78 4 0.93910 48 4 0.97959 68 5 0.94218 125 7 0.88655 105 5 0.92195 229 7 0.64201 91 5 0.77633 139 7 0.70927 195 4 0.83797 181 7 0.57857 83 6 0.81931 190 7 0.96304 356 7 0.93202 240 7 0.92521 358 7 0.94956 281 6 0.95415 273 7 0.94432 0.91909 0.91624 0.96025 0.90443 0.94301 0.94970 0.97779 0.96496 0.96493 0.95558 0.99933 0.98560 0.94965 0.89304 0.82604 0.97096 0.90272 0.91636 0.94820 1.00000 0.91494 0.95247 0.83217 0.97117 0.94866 0.91747 0.89313 0.97161 0.93666 0.93423 0.95712 0.73057 0.77768 0.53824 0.83119 0.70609 0.77268 0.96483 0.96292 0.93633 0.94332 0.96262 4 0.92903 0.92863 0.0006292 7 0.96407 0.95722 0.0068491 0.7925222 0.992605 insignificant 1 1 insignificant 0.9857092 0.980455 insignificant 1 1 insignificant -0.028204 0.10203 insignificant 1 insignificant 0.92690 0.67352 0.274497 7 0.84644 0.69667 0.149763 1.0254e-15 0.96768 hypermethylated 3.4181e-13 1 hypermethylated 1.9847e-06 0.99234 hypermethylated 0.00066157 1 hypermethylated 0.1878541 0.0052759 weaklyHypermeth 1 insignificant 0.92885 0.93369 -0.0060642 7 0.94354 0.94223 0.0013156 0.41205 7.1106e-01 insignificant 1 1.000000 insignificant 0.066301 9.8815e-01 insignificant 1 1.000000 insignificant -0.029699 0.054108 insignificant 1 insignificant 0.92840 0.67583 0.242739 7 0.93278 0.79620 0.136586 2.1295e-10 0.48944 hypermethylated 7.0983e-08 1 hypermethylated 2.9701e-05 0.97240 hypermethylated 0.0099004 1 hypermethylated 0.216058 0.0029245 weaklyHypermeth 0.73112 insignificant 0.92840 0.93369 -0.0063215 7 0.93278 0.94223 -0.0094472 0.79182 0.40336183 insignificant 1 1.00000 insignificant 0.12285 0.9732304 insignificant 1 1 insignificant -0.0014957 0.908814 insignificant 1 insignificant 0.67583 0.93369 -0.246923 7 0.79620 0.94223 -0.146033 0.95298 3.6719e-05 hypomethylated 1 9.1797e-03 hypomethylated 0.91172 7.8259e-03 weaklyHypometh 1 1.0000000 insignificant -0.217553 0.0031909 weaklyHypometh 1 insignificant chr4 120982737 120983737 49135 PDE5A ENSG00000138735 0.73329 593 17 0.67701 457 17 0.60268 355 17 0.67438 466 17 0.74109 226 17 0.67399 714 17 0.65383 308 17 0.65297 304 17 0.66633 239 13 0.69493 274 17 0.72177 613 17 0.63816 220 16 0.71138 430 17 0.93983 73 4 0.66530 329 17 0.64938 198 13 0.62539 158 11 0.70759 517 17 0.68758 395 17 0.69623 727 17 0.64805 165 13 0.79409 195 13 0.69624 401 14 0.65854 180 13 0.76430 152 13 0.71172 444 17 0.71547 215 12 0.66969 133 11 0.71470 344 17 0.73377 415 17 0.67772 481 17 0.67623 825 17 0.64342 486 17 0.65764 297 17 0.66296 386 17 0.72329 132 12 0.55931 216 15 0.65643 478 17 0.71730 466 17 0.74356 571 17 0.72611 542 17 0.74648 345 14 0.76433 498 17 0.76497 0.69194 0.61168 0.70617 0.75001 0.71224 0.69247 0.68052 0.72327 0.72585 0.75909 0.67678 0.74636 0.74743 0.72070 0.73027 0.57932 0.76777 0.74099 0.76428 0.68207 0.76562 0.71599 0.74485 0.71494 0.69465 0.68085 0.69375 0.73582 0.75863 0.69895 0.74031 0.65553 0.68904 0.69421 0.74563 0.63511 0.67143 0.75180 0.77299 0.77614 0.76006 0.79648 11 0.71064 0.71570 0.0019610 17 0.70409 0.68642 0.0176693 0.7097892 0.053217 insignificant 1 1 insignificant 0.9659214 0.026041 inconclusive 1 1 insignificant -0.014386 0.47369 insignificant 1 insignificant 0.71064 0.65113 0.060859 17 0.70409 0.60743 0.096662 9.3934e-06 0.99983 weaklyHypermeth 1.5656e-03 1 weaklyHypermeth 5.5292e-03 0.99882 weaklyHypermeth 0.92153978 1 insignificant 0.0401479 0.1579465 insignificant 1 insignificant 0.71063 0.75103 -0.0518844 17 0.69281 0.74239 -0.0495812 0.99994 2.5192e-05 weaklyHypometh 1 0.025192 weaklyHypometh 0.999737 2.5213e-05 weaklyHypometh 1 0.025213 weaklyHypometh -0.048899 0.010050 weaklyHypometh 1 insignificant 0.71570 0.65113 0.058197 17 0.68642 0.60743 0.078992 1.3538e-08 0.99993 weaklyHypermeth 3.3845e-06 1 weaklyHypermeth 3.9490e-04 0.99981 weaklyHypermeth 0.0987252 1 weaklyHypermeth 0.054534 0.0580472 insignificant 1.00000 insignificant 0.71595 0.75103 -0.0518386 17 0.70247 0.74239 -0.0399174 0.95817 0.00043188 weaklyHypometh 1 0.43188 insignificant 0.82164 0.0025194 weaklyHypometh 1 1 insignificant -0.0345123 0.036429 weaklyHypometh 1 insignificant 0.65143 0.75103 -0.112115 17 0.63967 0.74239 -0.102713 1.00000 1.2643e-11 weaklyHypometh 1 1.2643e-08 weaklyHypometh 0.99999 7.9777e-06 weaklyHypometh 1 0.0079777 weaklyHypometh -0.089047 0.0073585 weaklyHypometh 1 insignificant chr4 129815352 129816352 49690 PGRMC2 ENSG00000164040 0.72814 115 5 0.59349 106 5 0.66111 35 3 0.82415 114 5 0.85833 29 3 0.80730 138 5 0.66667 21 2 0.84052 91 5 0.73556 37 5 0.74524 50 2 0.72678 133 5 0.40000 9 0 0.86620 121 5 0.75000 32 2 0.73627 45 2 0.66667 11 0 NA 0 0 0.80748 126 5 0.85091 53 5 0.77110 128 5 1.00000 19 2 0.88810 33 2 0.87519 59 5 0.60833 29 2 1.00000 27 2 0.78371 134 5 0.38355 33 2 0.50000 7 0 0.84029 67 5 0.78416 133 5 0.75916 103 5 0.73848 184 5 0.72167 58 5 0.83864 49 5 0.64055 80 3 1.00000 13 0 0.72727 53 5 0.52688 109 5 0.76871 84 5 0.83391 102 5 0.78500 59 5 0.71667 42 5 0.82712 100 5 0.86922 0.56927 0.78436 0.88943 0.94335 0.88504 0.84035 0.91811 0.80000 0.81065 0.81612 0.68421 0.91085 0.87500 0.81824 0.84211 NA 0.89680 0.89426 0.77479 0.88392 0.88189 0.94915 0.79342 0.88392 0.87673 0.56074 0.57210 0.84966 0.88890 0.84729 0.84538 0.85373 0.84073 0.83563 1.00000 0.87799 0.69870 0.84055 0.92626 0.84211 0.85307 0.90665 0 0.78049 0.80072 -0.0095061 5 0.76686 0.72145 0.0454042 0.6916149 0.483663 insignificant 1 1 insignificant 0.6918808 0.489493 insignificant 1 1 insignificant -0.024683 0.68511 lowCoverage 1 lowCoverage 0.78049 0.71823 0.038337 5 0.76686 0.60316 0.163698 6.2645e-02 0.92632 insignificant 1.0000e+00 1 insignificant 7.8046e-01 0.53126 insignificant 1.00000000 1 insignificant -0.0037695 0.9594450 lowCoverage 1 lowCoverage 0.78042 0.81654 -0.0447663 5 0.76023 0.80291 -0.0426848 0.97946 1.7799e-01 insignificant 1 1.000000 insignificant 0.878358 2.8876e-01 insignificant 1 1.000000 insignificant -0.047551 0.172292 lowCoverage 1 lowCoverage 0.80072 0.71823 0.042571 5 0.72145 0.60316 0.118293 1.1617e-01 0.86425 insignificant 1.0000e+00 1 insignificant 7.0329e-01 0.53730 insignificant 1.0000000 1 insignificant 0.020913 0.8116349 lowCoverage 1.00000 lowCoverage 0.80145 0.81654 -0.0350969 5 0.76574 0.80291 -0.0371698 0.94020 0.25377135 insignificant 1 1.00000 insignificant 0.70752 0.3295332 insignificant 1 1 insignificant -0.0228681 0.699758 lowCoverage 1 lowCoverage 0.72022 0.81654 -0.078574 5 0.72379 0.80291 -0.079122 0.98791 8.2402e-02 insignificant 1 1.0000e+00 insignificant 0.80479 7.6231e-01 insignificant 1 1.0000000 insignificant -0.043782 0.5543704 lowCoverage 1 lowCoverage chr4 129925156 129926156 49701 ENSG00000209148 0.84502 288 7 0.76252 103 6 0.79890 107 7 0.86528 163 7 0.84969 56 7 0.65390 350 7 0.70959 70 4 0.75969 71 6 0.62045 85 4 0.78554 87 5 0.72144 192 7 0.72192 71 5 0.80500 90 6 0.53333 11 2 0.88540 83 4 0.90389 48 5 0.85932 58 5 0.76331 172 7 0.79845 128 7 0.69866 276 7 0.78750 142 5 0.69167 93 5 0.78531 247 5 0.66458 89 5 0.88857 91 5 0.81791 165 7 0.66869 124 5 0.71367 99 5 0.69089 85 7 0.64422 148 7 0.70566 121 6 0.74844 322 7 0.55306 72 6 0.69057 98 7 0.74858 184 7 0.79640 151 5 0.71386 203 7 0.59858 138 7 0.71620 276 7 0.71761 334 7 0.75398 212 7 0.80071 238 5 0.53240 204 7 0.88395 0.83692 0.80058 0.88729 0.88924 0.84357 0.82526 0.83676 0.79586 0.90127 0.86550 0.87310 0.87245 NA 0.91519 0.84479 0.78303 0.91669 0.89717 0.85161 0.80547 0.83590 0.85786 0.75746 0.87576 0.85835 0.81345 0.87407 0.80950 0.86309 0.91644 0.84635 0.71030 0.69963 0.85117 0.81260 0.84033 0.74200 0.90855 0.92604 0.93934 0.89731 0.86140 4 0.84689 0.81981 0.0319597 7 0.69011 0.59664 0.0934656 0.0029602 0.996502 weaklyHypermeth 1 1 insignificant 0.0057167 0.957281 weaklyHypermeth 1 1 insignificant 0.033138 0.27568 insignificant 1 insignificant 0.84689 0.79314 0.050605 7 0.69011 0.61477 0.075340 5.1349e-04 0.94459 weaklyHypermeth 5.7054e-02 1 weaklyHypermeth 2.0880e-02 0.94074 weaklyHypermeth 1.00000000 1 insignificant 0.0835580 0.0861041 insignificant 1 insignificant 0.84695 0.90261 -0.0335581 7 0.71828 0.60302 0.1152532 0.71896 2.2996e-01 insignificant 1 1.000000 insignificant 0.702885 1.5129e-01 insignificant 1 1.000000 insignificant 0.062884 0.258665 insignificant 1 insignificant 0.81981 0.79314 0.020075 7 0.59664 0.61477 -0.018126 1.1261e-02 0.91158 weaklyHypermeth 8.8248e-01 1 insignificant 1.6828e-01 0.68474 insignificant 1.0000000 1 insignificant 0.050420 0.2737453 insignificant 1.00000 insignificant 0.81981 0.90333 -0.0673873 7 0.59664 0.66333 -0.0666871 1.00000 0.00565541 weaklyHypometh 1 1.00000 insignificant 1.00000 0.0188006 weaklyHypometh 1 1 insignificant 0.0297457 0.576288 insignificant 1 insignificant 0.79314 0.90333 -0.079652 7 0.61477 0.66333 -0.048561 0.99771 6.4292e-03 weaklyHypometh 1 6.4292e-01 insignificant 0.92775 2.2101e-02 weaklyHypometh 1 1.0000000 insignificant -0.020674 0.7350690 insignificant 1 insignificant chr4 139959498 139960498 50440 ENSG00000196691 0.92467 346 5 0.93748 197 5 0.87213 129 5 0.93404 302 5 0.92507 92 5 0.92538 469 5 0.91791 138 5 0.96920 161 5 0.90731 166 5 0.91225 81 5 0.90246 135 5 0.96889 70 5 0.98947 184 5 0.96071 58 5 0.93334 161 5 0.86667 24 3 0.88611 42 5 0.91855 458 5 0.97778 81 5 0.95714 270 5 0.97417 52 3 0.96478 107 5 0.96491 125 5 0.98462 71 5 0.87000 51 4 0.97492 209 5 0.90991 88 5 0.95074 58 5 0.90608 204 5 0.96165 269 5 0.97699 218 5 0.94287 368 5 0.54507 201 5 0.70000 86 5 NA 0 0 0.60000 24 3 0.71528 108 5 0.93497 246 5 0.93852 407 5 0.97467 303 5 0.94003 352 5 0.94105 325 5 0.90703 372 5 0.93082 0.91520 0.88623 0.93879 0.89934 0.93466 0.90532 0.95838 0.91968 0.88161 0.88511 0.95674 0.99440 0.96664 0.93225 0.934752 0.84817 0.92841 0.98818 0.94962 0.96613 0.95991 0.97103 0.97840 0.93511 0.96680 0.89063 0.93282 0.90463 0.97422 0.97952 0.94369 0.58065 0.75975 NA 0.51560 0.71386 0.94906 0.92306 0.96586 0.92972 0.92004 0.90502 3 0.93182 0.95330 -0.0214252 5 0.93124 0.95282 -0.0215781 0.996894 0.015277 weaklyHypometh 1 1 insignificant 0.99441 0.0410661 weaklyHypometh 1 1 insignificant -0.0191411 0.145332 lowCoverage 1 lowCoverage 0.93182 0.75789 0.1737727 5 0.93124 0.74358 0.1876569 1.2088e-10 1.00000 weaklyHypermeth 2.0147e-08 1 weaklyHypermeth 3.6105e-06 0.99983 weaklyHypermeth 0.00072209 1 weaklyHypermeth 0.23026522 0.0256940 lowCoverage 1 lowCoverage 0.93182 0.92780 0.0028098 5 0.93124 0.93706 -0.0058275 4.0873e-01 2.9741e-01 insignificant 1.000e+00 1.000000 insignificant 3.5042e-01 0.66452711 insignificant 1.000000 1.00000 insignificant -0.0109308 0.4273219 lowCoverage 1 lowCoverage 0.95330 0.75789 0.195351 5 0.95282 0.74358 0.209235 4.0532e-08 1.00000 weaklyHypermeth 6.7554e-06 1 weaklyHypermeth 3.9633e-06 0.99999 weaklyHypermeth 0.0013211 1 weaklyHypermeth 0.249406 0.0194475 lowCoverage 1.00000 lowCoverage 0.95330 0.92780 0.0248822 5 0.95282 0.93706 0.015751 3.0016e-02 0.8230974 weaklyHypermeth 1.000e+00 1 insignificant 3.2509e-02 0.971553 weaklyHypermeth 1.00000000 1 insignificant 0.00821031 0.5892280 lowCoverage 1.00000 lowCoverage 0.75789 0.92780 -0.171902 5 0.74358 0.93706 -0.193484 9.9992e-01 8.2885e-04 weaklyHypometh 1.0000000 0.10360660 insignificant 0.999951 1.3176e-03 weaklyHypometh 1 0.188225 insignificant -0.241196 0.0216682 lowCoverage 1.00000 lowCoverage chr4 139959636 139960636 50441 ENSG00000196691 0.92467 346 5 0.93748 197 5 0.87213 129 5 0.93404 302 5 0.92507 92 5 0.92538 469 5 0.91791 138 5 0.96920 161 5 0.90731 166 5 0.91225 81 5 0.90246 135 5 0.96889 70 5 0.98947 184 5 0.96071 58 5 0.93334 161 5 0.86667 24 3 0.88611 42 5 0.91855 458 5 0.97778 81 5 0.95714 270 5 0.97417 52 3 0.96478 107 5 0.96491 125 5 0.98462 71 5 0.87000 51 4 0.97492 209 5 0.90991 88 5 0.95074 58 5 0.90608 204 5 0.96165 269 5 0.97699 218 5 0.94287 368 5 0.54507 201 5 0.70000 86 5 NA 0 0 0.60000 24 3 0.71528 108 5 0.93497 246 5 0.93852 407 5 0.97467 303 5 0.94003 352 5 0.94105 325 5 0.90703 372 5 0.93082 0.91520 0.88623 0.93879 0.89934 0.93466 0.90532 0.95838 0.91968 0.88161 0.88511 0.95674 0.99440 0.96664 0.93225 0.934752 0.84817 0.92841 0.98818 0.94962 0.96613 0.95991 0.97103 0.97840 0.93511 0.96680 0.89063 0.93282 0.90463 0.97422 0.97952 0.94369 0.58065 0.75975 NA 0.51560 0.71386 0.94906 0.92306 0.96586 0.92972 0.92004 0.90502 3 0.93182 0.95330 -0.0214252 5 0.93124 0.95282 -0.0215781 0.996894 0.015277 weaklyHypometh 1 1 insignificant 0.99441 0.0410661 weaklyHypometh 1 1 insignificant -0.0191411 0.145332 lowCoverage 1 lowCoverage 0.93182 0.75789 0.1737727 5 0.93124 0.74358 0.1876569 1.2088e-10 1.00000 weaklyHypermeth 2.0147e-08 1 weaklyHypermeth 3.6105e-06 0.99983 weaklyHypermeth 0.00072209 1 weaklyHypermeth 0.23026522 0.0256940 lowCoverage 1 lowCoverage 0.93182 0.92780 0.0028098 5 0.93124 0.93706 -0.0058275 4.0873e-01 2.9741e-01 insignificant 1.000e+00 1.000000 insignificant 3.5042e-01 0.66452711 insignificant 1.000000 1.00000 insignificant -0.0109308 0.4273219 lowCoverage 1 lowCoverage 0.95330 0.75789 0.195351 5 0.95282 0.74358 0.209235 4.0532e-08 1.00000 weaklyHypermeth 6.7554e-06 1 weaklyHypermeth 3.9633e-06 0.99999 weaklyHypermeth 0.0013211 1 weaklyHypermeth 0.249406 0.0194475 lowCoverage 1.00000 lowCoverage 0.95330 0.92780 0.0248822 5 0.95282 0.93706 0.015751 3.0016e-02 0.8230974 weaklyHypermeth 1.000e+00 1 insignificant 3.2509e-02 0.971553 weaklyHypermeth 1.00000000 1 insignificant 0.00821031 0.5892280 lowCoverage 1.00000 lowCoverage 0.75789 0.92780 -0.171902 5 0.74358 0.93706 -0.193484 9.9992e-01 8.2885e-04 weaklyHypometh 1.0000000 0.10360660 insignificant 0.999951 1.3176e-03 weaklyHypometh 1 0.188225 insignificant -0.241196 0.0216682 lowCoverage 1.00000 lowCoverage chr4 139959959 139960959 50442 ENSG00000196691 0.92467 346 5 0.93748 197 5 0.87213 129 5 0.93404 302 5 0.92507 92 5 0.92538 469 5 0.91791 138 5 0.96920 161 5 0.90731 166 5 0.91225 81 5 0.90246 135 5 0.96889 70 5 0.98947 184 5 0.96071 58 5 0.93334 161 5 0.86667 24 3 0.88611 42 5 0.91855 458 5 0.97778 81 5 0.95714 270 5 0.97417 52 3 0.96478 107 5 0.96491 125 5 0.98462 71 5 0.87000 51 4 0.97492 209 5 0.90991 88 5 0.95074 58 5 0.90608 204 5 0.96165 269 5 0.97699 218 5 0.94287 368 5 0.54507 201 5 0.70000 86 5 NA 0 0 0.60000 24 3 0.71528 108 5 0.93497 246 5 0.93852 407 5 0.97467 303 5 0.94003 352 5 0.94105 325 5 0.90703 372 5 0.93082 0.91520 0.88623 0.93879 0.89934 0.93466 0.90532 0.95838 0.91968 0.88161 0.88511 0.95674 0.99440 0.96664 0.93225 0.934752 0.84817 0.92841 0.98818 0.94962 0.96613 0.95991 0.97103 0.97840 0.93511 0.96680 0.89063 0.93282 0.90463 0.97422 0.97952 0.94369 0.58065 0.75975 NA 0.51560 0.71386 0.94906 0.92306 0.96586 0.92972 0.92004 0.90502 3 0.93182 0.95330 -0.0214252 5 0.93124 0.95282 -0.0215781 0.996894 0.015277 weaklyHypometh 1 1 insignificant 0.99441 0.0410661 weaklyHypometh 1 1 insignificant -0.0191411 0.145332 lowCoverage 1 lowCoverage 0.93182 0.75789 0.1737727 5 0.93124 0.74358 0.1876569 1.2088e-10 1.00000 weaklyHypermeth 2.0147e-08 1 weaklyHypermeth 3.6105e-06 0.99983 weaklyHypermeth 0.00072209 1 weaklyHypermeth 0.23026522 0.0256940 lowCoverage 1 lowCoverage 0.93182 0.92780 0.0028098 5 0.93124 0.93706 -0.0058275 4.0873e-01 2.9741e-01 insignificant 1.000e+00 1.000000 insignificant 3.5042e-01 0.66452711 insignificant 1.000000 1.00000 insignificant -0.0109308 0.4273219 lowCoverage 1 lowCoverage 0.95330 0.75789 0.195351 5 0.95282 0.74358 0.209235 4.0532e-08 1.00000 weaklyHypermeth 6.7554e-06 1 weaklyHypermeth 3.9633e-06 0.99999 weaklyHypermeth 0.0013211 1 weaklyHypermeth 0.249406 0.0194475 lowCoverage 1.00000 lowCoverage 0.95330 0.92780 0.0248822 5 0.95282 0.93706 0.015751 3.0016e-02 0.8230974 weaklyHypermeth 1.000e+00 1 insignificant 3.2509e-02 0.971553 weaklyHypermeth 1.00000000 1 insignificant 0.00821031 0.5892280 lowCoverage 1.00000 lowCoverage 0.75789 0.92780 -0.171902 5 0.74358 0.93706 -0.193484 9.9992e-01 8.2885e-04 weaklyHypometh 1.0000000 0.10360660 insignificant 0.999951 1.3176e-03 weaklyHypometh 1 0.188225 insignificant -0.241196 0.0216682 lowCoverage 1.00000 lowCoverage chr4 140051217 140052217 50472 ENSG00000196691 0.82813 128 5 0.68087 232 5 0.39154 48 5 0.62754 99 5 0.53182 42 4 0.76136 260 5 0.54310 53 5 0.71244 74 5 0.53750 18 2 0.28000 13 2 0.75671 229 5 0.24000 15 1 0.48750 34 4 0.32778 38 4 0.62500 48 2 0.25000 22 2 NA 0 0 0.65351 80 3 0.47586 87 3 0.66688 141 5 0.64000 40 4 1.00000 1 0 0.60526 74 5 0.61818 41 4 0.54861 21 1 0.70979 187 5 0.61607 27 4 0.66190 36 2 0.54342 101 5 0.78462 217 5 0.76580 222 5 0.78361 185 5 0.50105 112 5 0.50874 87 5 1.00000 59 1 0.59091 44 1 0.38646 76 5 0.82626 263 5 0.38358 162 5 0.21707 205 5 0.20591 117 5 0.52333 84 3 0.29864 195 5 0.66392 0.48135 0.29876 0.49565 0.39854 0.53824 0.40446 0.51113 0.38036 0.18571 0.62914 0.10714 0.38512 0.10238 0.41429 0.035714 NA 0.33631 0.20443 0.41638 0.49921 NA 0.29066 0.50325 0.42880 0.55017 0.51063 0.58248 0.41267 0.64275 0.57539 0.70595 0.18441 0.11820 NA NA 0.17169 0.79874 0.15257 0.11081 0.03986 0.16224 0.26573 0 0.59928 0.68576 -0.0764880 5 0.64476 0.71285 -0.0680821 0.994998 0.016593 weaklyHypometh 1 1 insignificant 0.99973 0.0022828 weaklyHypometh 1 1 insignificant -0.1435869 0.015367 lowCoverage 1 lowCoverage 0.59928 0.63027 0.0011075 5 0.64476 0.65020 -0.0054331 4.2574e-01 0.54487 insignificant 1.0000e+00 1 insignificant 2.1137e-01 0.66717 insignificant 1.00000000 1 insignificant -0.08938518 0.4145577 lowCoverage 1 lowCoverage 0.59928 0.23984 0.3580685 5 0.64476 0.27344 0.3713290 4.1340e-17 1.0000e+00 hypermethylated 4.134e-14 1.000000 hypermethylated 3.4270e-05 0.99998391 hypermethylated 0.017135 1.00000 hypermethylated 0.2204788 0.0144704 lowCoverage 1 lowCoverage 0.68576 0.63027 0.073878 5 0.71285 0.65020 0.062649 1.2969e-01 0.86498 insignificant 1.0000e+00 1 insignificant 3.4256e-02 0.89128 weaklyHypermeth 1.0000000 1 insignificant 0.054202 0.6107396 lowCoverage 1.00000 lowCoverage 0.68576 0.23984 0.4375909 5 0.71285 0.27344 0.439411 9.5020e-20 1.0000000 hypermethylated 9.502e-17 1 hypermethylated 2.0267e-07 1.000000 hypermethylated 0.00020267 1 hypermethylated 0.36406564 0.0010175 lowCoverage 0.41705 lowCoverage 0.63027 0.23984 0.354278 5 0.65020 0.27344 0.376762 1.0129e-06 1.0000e+00 hypermethylated 0.0010129 1.00000000 hypermethylated 0.015125 9.9944e-01 weaklyHypermeth 1 1.000000 insignificant 0.309864 0.0234227 lowCoverage 1.00000 lowCoverage chr4 141260676 141261676 50547 MAML3 ENSG00000196782 0.83473 239 7 0.77981 106 7 0.78269 114 7 0.79356 110 7 0.65918 33 3 0.82155 267 7 0.77275 103 7 0.74921 104 6 0.83079 91 7 0.83377 108 6 0.81573 203 7 0.71952 77 7 0.81727 126 7 1.00000 10 1 0.69079 89 7 0.81975 68 7 0.74989 77 7 0.85544 146 7 0.75536 181 7 0.83839 186 7 0.80763 34 4 0.76212 70 7 0.78298 167 7 0.87698 52 4 0.77336 70 7 0.70232 136 7 0.91571 66 6 0.88265 41 4 0.80870 83 6 0.76202 121 7 0.79048 114 7 0.83759 291 7 0.73712 116 7 0.79252 99 7 0.74155 142 7 0.84129 67 7 0.90877 50 4 0.74411 101 7 0.81291 255 7 0.83121 210 7 0.86852 183 7 0.83767 235 7 0.85620 209 7 0.84057 0.80254 0.78023 0.82564 0.64907 0.83305 0.77131 0.77035 0.83499 0.82476 0.81943 0.70952 0.84115 NA 0.70050 0.823703 0.76766 0.87933 0.80561 0.83876 0.81728 0.77404 0.81615 0.87118 0.77827 0.74581 0.91467 0.85901 0.81761 0.81052 0.81271 0.85259 0.76075 0.79729 0.74591 0.84932 0.88375 0.76092 0.83621 0.84758 0.89771 0.84974 0.86304 4 0.81624 0.81928 -0.0021582 7 0.80185 0.79708 0.0047703 0.557652 0.517431 insignificant 1 1 insignificant 0.95886 0.0622123 insignificant 1 1 insignificant -0.0125390 0.599819 insignificant 1 insignificant 0.81624 0.78609 0.0292467 7 0.80185 0.77587 0.0259815 1.2843e-02 0.55274 weaklyHypermeth 8.5618e-01 1 insignificant 2.8728e-01 0.24623 insignificant 1.00000000 1 insignificant 0.00178161 0.9573940 insignificant 1 insignificant 0.81624 0.84890 -0.0395232 7 0.80185 0.83965 -0.0377990 9.9222e-01 2.0684e-02 weaklyHypometh 1.000e+00 1.000000 insignificant 9.9633e-01 0.01238357 weaklyHypometh 1.000000 1.00000 insignificant -0.0452928 0.0236749 weaklyHypometh 1 insignificant 0.81928 0.78609 0.031882 7 0.79708 0.77587 0.021211 2.2380e-02 0.76527 weaklyHypermeth 1.0000e+00 1 insignificant 1.9853e-01 0.89725 insignificant 1.0000000 1 insignificant 0.014321 0.6763220 insignificant 1.00000 insignificant 0.81928 0.84890 -0.0381805 7 0.79708 0.83965 -0.042569 9.9260e-01 0.0766227 insignificant 1.000e+00 1 insignificant 8.9531e-01 0.339868 insignificant 1.00000000 1 insignificant -0.03275379 0.1222662 insignificant 1.00000 insignificant 0.78609 0.84890 -0.070487 7 0.77587 0.83965 -0.063780 8.9907e-01 1.3403e-03 weaklyHypometh 1.0000000 0.13402908 insignificant 0.846794 3.2521e-02 weaklyHypometh 1 1.000000 insignificant -0.047074 0.1645694 insignificant 1.00000 insignificant chr4 141277635 141278635 50551 MAML3 ENSG00000196782 0.61308 373 12 0.54223 249 12 0.51614 118 10 0.67367 273 12 0.63939 97 12 0.69465 395 12 0.49947 122 8 0.67638 187 12 0.57274 94 8 0.60034 156 12 0.67239 391 12 0.56292 85 11 0.69293 152 12 0.73810 30 4 0.61016 134 12 0.57114 90 11 0.63153 131 7 0.66781 272 12 0.72197 185 8 0.71634 324 12 0.66146 70 8 0.74924 90 11 0.65506 169 12 0.55251 65 4 0.62674 70 7 0.60898 297 12 0.67608 90 9 0.64015 40 4 0.63654 151 9 0.70373 207 12 0.65373 230 12 0.67331 511 12 0.53406 166 12 0.57307 127 12 0.55649 229 8 0.78548 69 6 0.60356 117 12 0.60322 271 12 0.71618 345 12 0.66245 337 12 0.72047 252 12 0.70300 299 11 0.77433 282 12 0.69756 0.59317 0.62904 0.73039 0.67476 0.74414 0.61423 0.70201 0.66868 0.70089 0.70269 0.63986 0.70589 0.69887 0.66920 0.614327 0.66209 0.71634 0.74504 0.71701 0.78125 0.77890 0.69340 0.66802 0.67419 0.65595 0.70288 0.70037 0.69676 0.76015 0.72215 0.71182 0.57240 0.63549 0.63356 0.76684 0.66644 0.64965 0.72370 0.76064 0.75081 0.73520 0.79169 4 0.65137 0.69246 -0.0231625 12 0.64852 0.65563 -0.0071080 0.815588 0.013010 weaklyHypometh 1 1 insignificant 0.92356 0.0167483 weaklyHypometh 1 1 insignificant -0.0224576 0.294946 insignificant 1 insignificant 0.65127 0.61798 0.0481014 12 0.64218 0.60024 0.0419398 5.6439e-03 0.99521 weaklyHypermeth 4.0313e-01 1 insignificant 8.8251e-02 0.98145 insignificant 1.00000000 1 insignificant 0.02135772 0.6110662 insignificant 1 insignificant 0.65124 0.68119 -0.0717206 12 0.63652 0.70079 -0.0642609 9.9995e-01 4.4702e-05 weaklyHypometh 1.000e+00 0.025082 weaklyHypometh 9.9999e-01 0.00027074 weaklyHypometh 1.000000 0.13537 insignificant -0.0846163 0.0045308 weaklyHypometh 1 insignificant 0.69250 0.61798 0.071481 12 0.65494 0.60024 0.054700 1.8561e-04 0.99974 weaklyHypermeth 1.8561e-02 1 weaklyHypermeth 8.7998e-03 0.99965 weaklyHypermeth 0.8799780 1 insignificant 0.043815 0.3066212 insignificant 1.00000 insignificant 0.69367 0.68119 -0.0492938 12 0.69069 0.70079 -0.010094 9.5425e-01 0.0045568 weaklyHypometh 1.000e+00 1 insignificant 9.0856e-01 0.036708 weaklyHypometh 1.00000000 1 insignificant -0.06215870 0.0230678 weaklyHypometh 1.00000 insignificant 0.61728 0.68119 -0.122005 12 0.58491 0.70079 -0.115879 1.0000e+00 1.7841e-07 weaklyHypometh 1.0000000 0.00017841 weaklyHypometh 0.999998 8.2384e-05 weaklyHypometh 1 0.063534 weaklyHypometh -0.105974 0.0357450 weaklyHypometh 1.00000 insignificant chr4 142152162 142153162 50577 ENSG00000222613 0.92473 197 5 0.83209 195 5 0.82747 79 5 0.93644 212 5 0.87143 49 2 0.91242 223 5 0.87071 47 5 0.87801 175 5 0.80898 95 5 0.89333 89 3 0.92174 134 5 0.95556 21 1 0.93089 177 5 0.84848 66 2 0.87402 146 5 0.69758 38 4 0.86833 34 4 0.86083 275 5 0.90598 146 5 0.85356 213 5 0.70000 16 0 0.88925 99 5 0.91707 117 5 0.78462 36 2 0.94738 69 5 0.85452 249 5 0.88955 75 5 0.96667 27 4 0.84012 96 5 0.90098 237 5 0.93608 234 5 0.90887 234 5 0.73607 170 5 0.81786 104 5 0.50000 62 2 0.58692 32 3 0.59710 85 5 0.60819 232 5 0.91670 224 5 0.84394 215 5 0.86759 205 5 0.88022 213 5 0.88388 158 5 0.92531 0.83143 0.82872 0.92918 0.88874 0.90856 0.84536 0.88515 0.82241 0.89515 0.91895 0.96768 0.94199 0.85666 0.89083 0.780055 0.88424 0.88058 0.89044 0.84475 0.70682 0.91946 0.88581 0.83566 0.94307 0.86303 0.88937 0.97576 0.83292 0.91363 0.94524 0.90585 0.78841 0.83896 0.59413 0.59958 0.65417 0.60558 0.91848 0.88067 0.87648 0.90208 0.91299 2 0.88548 0.90128 -0.0159034 5 0.88611 0.89816 -0.0120470 0.885918 0.274262 insignificant 1 1 insignificant 0.93394 0.2111258 insignificant 1 1 insignificant -0.0042967 0.866009 lowCoverage 1 lowCoverage 0.88548 0.69635 0.1894255 5 0.88611 0.67248 0.2136332 3.8583e-14 1.00000 weaklyHypermeth 3.8583e-11 1 weaklyHypermeth 3.3633e-06 0.83398 weaklyHypermeth 0.00072209 1 weaklyHypermeth 0.23260596 0.0034159 lowCoverage 1 lowCoverage 0.88548 0.89754 -0.0200231 5 0.88611 0.88438 0.0017253 2.1376e-01 7.1341e-02 insignificant 1.000e+00 1.000000 insignificant 3.3229e-01 0.16046991 insignificant 1.000000 1.00000 insignificant -0.0048379 0.7851934 lowCoverage 1 lowCoverage 0.90128 0.69635 0.205270 5 0.89816 0.67248 0.225680 2.9197e-10 1.00000 hypermethylated 1.4598e-07 1 hypermethylated 9.7407e-06 0.96412 hypermethylated 0.0019481 1 hypermethylated 0.236903 0.0023575 lowCoverage 0.88713 lowCoverage 0.90128 0.89754 -0.0014440 5 0.89816 0.88438 0.013772 2.9659e-01 0.4600653 insignificant 1.000e+00 1 insignificant 1.7087e-01 0.818966 insignificant 1.00000000 1 insignificant -0.00054116 0.9827777 lowCoverage 1.00000 lowCoverage 0.69635 0.89754 -0.209570 5 0.67248 0.88438 -0.211908 9.9999e-01 4.2482e-06 hypomethylated 1.0000000 0.00212412 hypomethylated 0.966128 2.0154e-04 hypomethylated 1 0.063534 hypomethylated -0.237444 0.0032265 lowCoverage 0.80663 lowCoverage chr4 145807906 145808906 50753 HHIP ENSG00000164161 0.89519 352 12 0.81794 230 12 0.85298 227 12 0.80525 219 9 0.85519 135 12 0.70354 536 13 0.81654 223 12 0.76704 239 12 0.80809 163 12 0.80636 187 12 0.81400 307 12 0.79493 125 11 0.83764 219 12 NA 0 0 0.85709 199 12 0.74428 82 9 0.89743 498 10 0.86152 290 12 0.77909 204 11 0.70266 383 12 0.49429 70 5 0.79722 99 9 0.87757 244 12 0.73571 63 7 0.88095 60 5 0.86773 303 12 0.81549 115 12 0.70697 52 3 0.70362 160 9 0.74014 324 10 0.69519 346 12 0.72790 568 12 0.80136 266 12 0.83352 166 10 0.80640 170 5 0.63229 41 2 0.74882 115 8 0.84567 380 12 0.82676 331 12 0.86003 299 12 0.74872 247 12 0.84178 279 12 0.81531 230 9 0.90458 0.80471 0.85870 0.81171 0.86708 0.80109 0.79967 0.81051 0.87196 0.89537 0.81157 0.83245 0.86006 NA 0.86150 0.757266 0.88688 0.86075 0.88966 0.78311 0.65280 0.84027 0.87136 0.81890 0.92264 0.86469 0.81121 0.80246 0.85226 0.85145 0.83834 0.80985 0.78516 0.82988 0.84444 0.57210 0.88142 0.84844 0.92328 0.87997 0.88360 0.87418 0.82817 3 0.84807 0.84027 0.0073032 12 0.75377 0.72146 0.0323038 0.098624 0.699867 insignificant 1 1 insignificant 0.10114 0.5591107 insignificant 1 1 insignificant 0.0578427 0.104962 insignificant 1 insignificant 0.84807 0.82513 0.0200846 12 0.75377 0.71001 0.0437591 1.0509e-01 0.90933 insignificant 1.0000e+00 1 insignificant 3.5179e-01 0.79233 insignificant 1.00000000 1 insignificant 0.03340035 0.3682078 insignificant 1 insignificant 0.84807 0.89971 -0.0360429 12 0.75377 0.73885 0.0149142 8.1681e-01 5.4060e-02 insignificant 1.000e+00 1.000000 insignificant 7.6731e-01 0.32444735 insignificant 1.000000 1.00000 insignificant -0.0071102 0.7633373 insignificant 1 insignificant 0.84027 0.82513 0.015064 12 0.72146 0.71001 0.011455 2.5565e-01 0.83635 insignificant 1.0000e+00 1 insignificant 7.3373e-01 0.69851 insignificant 1.0000000 1 insignificant -0.024442 0.5934651 insignificant 1.00000 insignificant 0.84027 0.89971 -0.0423531 12 0.72146 0.73885 -0.017390 7.0781e-01 0.0168450 weaklyHypometh 1.000e+00 1 insignificant 8.1463e-01 0.366120 insignificant 1.00000000 1 insignificant -0.06495299 0.0942042 insignificant 1.00000 insignificant 0.82513 0.89971 -0.054211 12 0.71001 0.73885 -0.028845 9.4064e-01 4.7649e-02 weaklyHypometh 1.0000000 1.00000000 insignificant 0.908952 5.5077e-01 insignificant 1 1.000000 insignificant -0.040511 0.3104632 insignificant 1.00000 insignificant chr4 147038627 147039627 50863 MMAA ENSG00000151611 0.61432 156 5 0.57514 179 5 0.71551 84 5 0.68710 124 5 0.70560 98 5 0.77346 225 5 0.68758 76 5 0.57742 99 5 0.50291 117 5 0.70606 83 5 0.71594 277 5 0.55516 90 5 0.62211 89 5 0.73285 71 5 0.68616 88 5 0.60556 51 5 0.60284 435 4 0.78541 134 5 0.75545 98 5 0.62602 135 5 0.55614 57 5 0.73333 51 5 0.65519 114 5 0.77825 55 5 0.60088 77 4 0.54678 202 5 0.62820 71 5 0.62500 26 1 0.64881 110 5 0.74533 243 5 0.70756 186 5 0.58540 200 5 0.79594 88 5 0.49945 105 5 0.66456 107 5 0.82857 29 4 0.68385 114 5 0.50024 235 5 0.77032 128 5 0.72359 160 5 0.78554 161 5 0.53697 77 4 0.74467 149 5 0.61112 0.69038 0.66932 0.66641 0.65048 0.66051 0.67583 0.68080 0.58167 0.62888 0.64448 0.65563 0.72955 0.73672 0.68502 0.708258 0.67028 0.72324 0.68122 0.73319 0.64629 0.72928 0.64661 0.75884 0.60471 0.63617 0.60457 0.51802 0.65721 0.68042 0.69273 0.69279 0.78558 0.57829 0.63646 0.82432 0.58829 0.63015 0.70462 0.72497 0.76966 0.60112 0.72733 4 0.70421 0.74551 -0.0137245 5 0.64927 0.62752 0.0217547 0.536153 0.120046 insignificant 1 1 insignificant 0.39599 0.7719773 insignificant 1 1 insignificant 0.0107232 0.704881 lowCoverage 1 lowCoverage 0.70421 0.66667 0.0387614 5 0.64927 0.56798 0.0812907 7.7274e-02 0.97321 insignificant 1.0000e+00 1 insignificant 7.6221e-01 0.64220 insignificant 1.00000000 1 insignificant -0.00047343 0.9939599 lowCoverage 1 lowCoverage 0.70421 0.77333 -0.0490851 5 0.64927 0.77657 -0.1272975 9.9287e-01 5.9037e-03 weaklyHypometh 1.000e+00 0.983949 insignificant 9.7453e-01 0.01292870 weaklyHypometh 1.000000 1.00000 insignificant -0.0505875 0.3410646 lowCoverage 1 lowCoverage 0.74551 0.66667 0.050930 5 0.62752 0.56798 0.059536 2.8488e-02 0.88895 weaklyHypermeth 1.0000e+00 1 insignificant 9.1742e-01 0.44618 insignificant 1.0000000 1 insignificant -0.011197 0.8608459 lowCoverage 1.00000 lowCoverage 0.74551 0.77333 -0.0442709 5 0.62752 0.77657 -0.149052 9.9353e-01 0.0404015 weaklyHypometh 1.000e+00 1 insignificant 9.9875e-01 0.025903 weaklyHypometh 1.00000000 1 insignificant -0.06131066 0.2670108 lowCoverage 1.00000 lowCoverage 0.66667 0.77333 -0.079780 5 0.56798 0.77657 -0.208588 9.8887e-01 1.8426e-02 weaklyHypometh 1.0000000 1.00000000 insignificant 0.982302 2.6792e-01 insignificant 1 1.000000 insignificant -0.050114 0.5097823 lowCoverage 1.00000 lowCoverage chr4 161429764 161430764 51745 ENSG00000208635 0.98032 72 6 0.96062 194 6 0.78273 45 4 0.97222 36 4 0.95447 74 6 0.96958 88 6 0.82017 57 4 0.92687 111 6 0.83356 52 6 0.98548 102 6 0.95298 223 6 0.95238 28 4 0.92229 153 6 NA 0 0 0.96429 68 6 0.73294 31 4 0.79167 16 0 0.72222 26 2 0.94994 135 6 0.96222 103 6 0.85983 49 4 1.00000 15 0 0.94313 128 6 0.90774 33 4 1.00000 8 0 0.94078 222 6 0.94721 87 6 1.00000 4 0 0.93357 177 6 0.95077 289 6 0.97320 202 6 0.97034 128 6 0.82635 149 6 0.86050 194 6 0.84782 143 6 0.91667 12 0 0.97917 36 6 0.88099 290 6 0.90833 20 3 0.97086 126 6 0.97619 28 2 0.91111 21 2 0.95238 29 4 0.96808 0.96139 0.81341 0.98756 0.94040 0.96044 0.82939 0.92226 0.82717 0.97648 0.95008 0.91471 0.92189 NA 0.93603 0.72267 0.85821 0.71517 0.94275 0.97755 0.85687 1.00000 0.94743 0.88646 0.99116 0.94416 0.93578 0.99116 0.93781 0.94574 0.97774 0.97035 0.82471 0.86579 0.83602 0.92537 0.97015 0.87508 0.95771 0.96690 0.95736 0.89055 0.92324 0 0.92999 0.94858 -0.0185820 6 0.93163 0.94906 -0.0174300 0.97464 0.147481 insignificant 1 1 insignificant 0.97189 0.09362714 insignificant 1 1.00000 insignificant -5.0270e-02 0.0431144 lowCoverage 1 lowCoverage 0.92999 0.86529 0.064389 6 0.93163 0.86375 0.067873 3.2455e-05 0.99887 weaklyHypermeth 0.0036061 1 weaklyHypermeth 0.158417 0.88986 insignificant 1 1 insignificant 0.016695 0.59265 lowCoverage 1 lowCoverage 0.92999 0.95089 -0.021262 6 0.93163 0.95418 -0.022548 0.89929 0.248156 insignificant 1 1 insignificant 0.98769 0.055112 insignificant 1 1 insignificant -0.041831 0.111529 lowCoverage 1 lowCoverage 0.94858 0.86529 0.083564 6 0.94906 0.86375 0.085303 1.6116e-11 1.00000 weaklyHypermeth 1.5307e-08 1 weaklyHypermeth 7.7036e-03 0.99843 weaklyHypermeth 0.962948 1 insignificant 0.066965 0.0309047 lowCoverage 1 lowCoverage 0.94858 0.95089 -0.0024652 6 0.94906 0.95418 -0.0051183 0.31841 0.125807 insignificant 1 1 insignificant 0.64966 0.143088 insignificant 1 1 insignificant 0.0084389 0.66230 lowCoverage 1 lowCoverage 0.86529 0.95089 -0.090163 6 0.86375 0.95418 -0.090421 0.99473 1.0532e-05 weaklyHypometh 1 0.0035106 weaklyHypometh 0.90969 0.0222095 weaklyHypometh 1 1 insignificant -0.058526 0.059799 lowCoverage 1 lowCoverage chr4 166060941 166061941 51862 ENSG00000201050 0.61795 238 6 0.54037 128 6 0.56287 85 6 0.67995 186 6 0.61490 84 6 0.57744 185 6 0.58376 96 6 0.55867 112 6 0.60503 66 6 0.64363 81 6 0.74430 245 6 0.81579 60 3 0.78458 138 6 0.68197 39 3 0.56458 84 6 0.46863 68 6 0.64270 46 3 0.66432 188 6 0.78107 117 6 0.54887 166 6 0.55333 25 2 0.94286 30 2 0.65665 162 6 0.78750 45 4 0.77991 23 2 0.66986 154 6 0.71599 45 2 0.54179 41 3 0.71439 111 6 0.47063 92 6 0.81581 93 6 0.57533 248 6 0.52855 128 6 0.55780 72 6 0.45081 122 6 0.75000 23 1 0.55139 113 6 0.52826 149 6 0.64438 267 6 0.70829 247 6 0.70341 194 6 0.63252 184 6 0.69759 210 6 0.68514 0.62675 0.47270 0.75853 0.74282 0.60702 0.60618 0.68160 0.60656 0.72436 0.79790 0.72396 0.82585 0.69497 0.74365 0.50568 0.69888 0.76431 0.78740 0.69966 0.66169 0.92801 0.70432 0.89336 0.80760 0.65721 0.69083 0.67613 0.75952 0.63603 0.81019 0.59580 0.50295 0.54438 0.62053 0.81469 0.63084 0.64405 0.82329 0.76707 0.74465 0.73539 0.70200 2 0.67579 0.69972 -0.0034542 6 0.63837 0.68899 -0.0506155 0.74394 0.455272 insignificant 1 1 insignificant 0.95260 0.19218169 insignificant 1 1.00000 insignificant -5.1269e-02 0.2618319 lowCoverage 1 lowCoverage 0.67526 0.59473 0.093343 6 0.58267 0.48546 0.097212 3.4900e-04 0.99959 weaklyHypermeth 0.0268461 1 weaklyHypermeth 0.080367 0.99840 insignificant 1 1 insignificant 0.072934 0.15092 insignificant 1 insignificant 0.67526 0.71325 -0.052206 6 0.58267 0.60556 -0.022893 0.96241 0.046524 weaklyHypometh 1 1 insignificant 0.96370 0.030867 weaklyHypometh 1 1 insignificant -0.043169 0.115589 insignificant 1 insignificant 0.69831 0.59473 0.094114 6 0.60013 0.48546 0.114670 1.5358e-03 0.99947 weaklyHypermeth 1.1814e-01 1 insignificant 1.5168e-02 0.99350 weaklyHypermeth 1.000000 1 insignificant 0.124203 0.0464037 lowCoverage 1 lowCoverage 0.69831 0.71325 -0.0506752 6 0.60013 0.60556 -0.0054349 0.95858 0.048267 weaklyHypometh 1 1 insignificant 0.86567 0.216948 insignificant 1 1 insignificant 0.0081009 0.85075 lowCoverage 1 lowCoverage 0.59473 0.71325 -0.146642 6 0.48546 0.60556 -0.120105 1.00000 1.1547e-04 weaklyHypometh 1 0.0164952 weaklyHypometh 0.99992 0.0100535 weaklyHypometh 1 1 insignificant -0.116102 0.035683 weaklyHypometh 1 insignificant chr4 168750198 168751198 51949 ENSG00000208568 0.59785 120 6 0.52565 98 6 0.64286 34 4 0.87069 98 6 0.83771 100 6 0.57143 66 8 0.52799 59 6 0.72689 96 6 0.57083 60 6 0.57500 30 4 0.63046 142 6 0.27778 10 0 0.85768 71 6 0.73264 75 6 0.81155 76 6 0.71429 25 2 0.75000 4 0 0.48938 155 4 0.60000 38 6 0.58056 59 2 0.65833 27 3 0.94444 14 0 0.78750 46 2 0.58333 39 4 0.81944 66 2 0.55769 76 6 0.59127 23 2 0.75397 22 2 0.71172 81 6 0.73502 59 6 0.55619 78 6 0.64535 55 6 0.54066 99 6 0.69778 51 6 0.56012 99 6 0.66667 7 0 0.66531 52 5 0.55436 99 6 0.57565 117 6 0.61035 128 6 0.72132 144 6 0.94253 62 2 0.56868 111 6 0.74681 0.72089 0.75584 0.86476 0.72394 0.75065 0.69353 0.76593 0.78545 0.82909 0.85915 0.45455 0.91661 0.79949 0.82221 0.77576 0.78502 0.72923 0.82424 0.73485 0.85818 0.96970 0.94545 0.68377 0.82273 0.73730 0.81707 0.82771 0.85890 0.78656 0.78493 0.85713 0.66598 0.70773 0.77329 0.74545 0.64416 0.75253 0.77544 0.83107 0.74398 0.90596 0.77043 0 0.75212 0.77816 -0.0378872 6 0.58016 0.66514 -0.0849788 0.94510 0.091029 insignificant 1 1 insignificant 0.96580 0.03594783 weaklyHypometh 1 1.00000 insignificant -5.0794e-02 0.2934709 lowCoverage 1 lowCoverage 0.75302 0.68796 0.055228 6 0.61101 0.56665 0.044360 2.1182e-02 0.99232 weaklyHypermeth 1.0000000 1 insignificant 0.154742 0.99523 insignificant 1 1 insignificant 0.030412 0.49053 lowCoverage 1 lowCoverage 0.75302 0.78114 -0.004910 6 0.61101 0.57416 0.036850 0.48732 0.582060 insignificant 1 1 insignificant 0.56840 0.587938 insignificant 1 1 insignificant -0.039145 0.631627 lowCoverage 1 lowCoverage 0.77778 0.68796 0.090026 6 0.62328 0.56665 0.056628 3.5046e-04 0.98759 weaklyHypermeth 2.9205e-02 1 weaklyHypermeth 1.6247e-03 0.99250 weaklyHypermeth 0.324942 1 insignificant 0.081206 0.0886842 lowCoverage 1 lowCoverage 0.77778 0.78114 0.0343591 6 0.62328 0.57416 0.0491182 0.10366 0.972306 insignificant 1 1 insignificant 0.20565 0.983852 insignificant 1 1 insignificant 0.0116487 0.88651 lowCoverage 1 lowCoverage 0.68796 0.78114 -0.059492 6 0.56665 0.57416 -0.007510 0.95736 2.9288e-03 weaklyHypometh 1 0.2252908 insignificant 0.97519 0.0658924 insignificant 1 1 insignificant -0.069557 0.398522 lowCoverage 1 lowCoverage chr4 169713000 169714000 51967 PALLD ENSG00000129116 0.83882 320 9 0.62793 240 9 0.79153 176 9 0.77518 216 9 0.83467 127 9 0.82272 347 9 0.73742 200 9 0.86372 140 9 0.82187 119 9 0.78734 145 8 0.83371 321 9 0.83793 114 8 0.82077 126 8 0.88889 22 2 0.83280 163 8 0.72475 94 8 0.73577 597 9 0.85218 219 8 0.75731 195 8 0.87237 246 8 0.79274 113 9 0.74524 99 5 0.72296 180 9 0.93690 73 8 0.98214 47 4 0.81798 310 9 0.64356 128 9 0.79430 74 7 0.75220 124 8 0.81363 290 9 0.80229 283 9 0.83052 351 9 0.69765 153 8 0.76662 164 9 0.64572 239 9 0.90983 70 5 0.79589 154 9 0.76947 307 9 0.87348 344 9 0.90244 322 9 0.75352 308 9 0.83962 234 8 0.88620 332 9 0.87071 0.72583 0.79835 0.89916 0.83499 0.83871 0.76622 0.87569 0.83370 0.80667 0.84949 0.83729 0.84206 0.88864 0.83436 0.78162 0.79497 0.90097 0.84601 0.88007 0.79897 0.79143 0.75155 0.93195 0.98130 0.83912 0.66395 0.88392 0.79688 0.83826 0.83786 0.83319 0.78451 0.75267 0.72131 0.91421 0.83342 0.78631 0.88509 0.90746 0.85105 0.86208 0.89193 8 0.83402 0.82722 0.0206217 9 0.78920 0.79546 -0.0062585 0.13021 0.657924 insignificant 1 1 insignificant 0.45935 0.80891038 insignificant 1 1.00000 insignificant 1.1544e-05 0.9996918 insignificant 1 insignificant 0.83402 0.79393 0.056405 9 0.78920 0.69284 0.096360 4.4329e-05 0.90633 weaklyHypermeth 0.0044329 1 weaklyHypermeth 0.062756 0.96292 insignificant 1 1 insignificant 0.038687 0.36105 insignificant 1 insignificant 0.83402 0.87338 -0.040194 9 0.78920 0.86208 -0.072881 0.99845 0.002133 weaklyHypometh 1 1 insignificant 0.99605 0.011979 weaklyHypometh 1 1 insignificant -0.048168 0.155264 insignificant 1 insignificant 0.82722 0.79393 0.034065 9 0.79546 0.69284 0.102618 1.2096e-02 0.82452 weaklyHypermeth 6.7457e-01 1 insignificant 8.5633e-02 0.77150 insignificant 1.000000 1 insignificant 0.038675 0.4108177 insignificant 1 insignificant 0.82722 0.87338 -0.0560059 9 0.79546 0.86208 -0.0666224 0.99988 0.002787 weaklyHypometh 1 1 insignificant 0.99974 0.031045 weaklyHypometh 1 1 insignificant -0.0481791 0.21934 insignificant 1 insignificant 0.79393 0.87338 -0.089112 9 0.69284 0.86208 -0.169240 1.00000 2.6240e-06 weaklyHypometh 1 0.0026240 weaklyHypometh 0.99637 0.0014806 weaklyHypometh 1 1 insignificant -0.086855 0.089250 insignificant 1 insignificant chr4 169882589 169883589 51984 ENSG00000206613 0.74775 174 5 0.71925 61 5 0.72814 107 5 0.85115 94 5 0.58340 35 3 0.78713 201 5 0.66708 66 5 0.68172 62 5 0.79076 63 5 0.79346 71 5 0.82073 123 5 0.86727 52 5 0.87707 83 5 NA 0 0 0.85797 65 5 0.72381 45 5 0.79273 67 5 0.79481 90 5 0.77649 92 5 0.82340 172 5 1.00000 18 2 0.91333 34 4 0.90250 92 5 0.87500 28 3 0.77727 34 2 0.81541 137 5 0.85895 56 3 0.84286 50 5 0.83953 78 5 0.81071 147 5 0.78611 111 5 0.78296 188 5 0.75376 82 5 0.60659 70 5 0.72784 103 5 0.82143 46 5 0.71048 31 4 0.75718 151 5 0.82158 153 5 0.88080 158 5 0.75832 122 5 0.85872 194 5 0.86387 133 5 0.75254 0.72262 0.73221 0.85355 0.58502 0.78956 0.67430 0.68404 0.79113 0.80095 0.82244 0.87245 0.88405 NA 0.86379 0.72019 0.80033 0.80069 0.77941 0.82405 1.00000 0.92222 0.90959 0.87306 0.78330 0.82330 0.86411 0.85161 0.84627 0.81113 0.78865 0.79028 0.75282 0.59934 0.72992 0.81165 0.70993 0.76193 0.82542 0.88507 0.76859 0.86799 0.86173 3 0.79338 0.82734 -0.0326920 5 0.79071 0.82290 -0.0321909 0.97986 0.021191 weaklyHypometh 1 1 insignificant 0.99962 0.00018164 weaklyHypometh 1 0.18164 insignificant -7.7537e-02 0.0054772 lowCoverage 1 lowCoverage 0.79338 0.72878 0.061873 5 0.79071 0.73048 0.060234 1.9515e-03 0.97803 weaklyHypermeth 0.1219660 1 insignificant 0.024246 0.95349 weaklyHypermeth 1 1 insignificant 0.043303 0.23282 lowCoverage 1 lowCoverage 0.79338 0.84211 -0.047866 5 0.79071 0.83375 -0.043038 0.95535 0.030039 weaklyHypometh 1 1 insignificant 0.98996 0.030201 weaklyHypometh 1 1 insignificant -0.063808 0.045794 lowCoverage 1 lowCoverage 0.82734 0.72878 0.097910 5 0.82290 0.73048 0.092425 9.6950e-06 0.99440 weaklyHypermeth 1.2119e-03 1 weaklyHypermeth 9.7003e-05 0.99453 weaklyHypermeth 0.097003 1 weaklyHypermeth 0.120840 0.0064247 lowCoverage 1 lowCoverage 0.82734 0.84211 -0.0041809 5 0.82290 0.83375 -0.0108469 0.35151 0.243825 insignificant 1 1 insignificant 0.39647 0.812530 insignificant 1 1 insignificant 0.0137297 0.64400 lowCoverage 1 lowCoverage 0.72878 0.84211 -0.103776 5 0.73048 0.83375 -0.103272 0.99933 1.4611e-03 weaklyHypometh 1 0.1623391 insignificant 0.99176 0.0077405 weaklyHypometh 1 1 insignificant -0.107110 0.016740 lowCoverage 1 lowCoverage chr4 174791077 174792077 52220 ENSG00000218283 0.86529 275 5 0.73766 136 5 0.75862 105 5 0.79424 218 5 0.83485 68 5 0.87487 295 5 0.63603 105 5 0.81799 143 5 0.72728 127 3 0.87320 102 4 0.84136 138 5 0.63986 85 3 0.89746 110 5 1.00000 7 0 0.82742 131 5 0.96000 63 3 0.50858 66 3 0.54515 186 5 0.69760 88 5 0.84461 247 5 0.74444 43 5 0.84150 76 5 0.88580 145 5 0.89417 95 5 0.81988 60 5 0.87941 213 5 0.65060 68 5 0.75411 47 4 0.82842 115 5 0.89213 205 5 0.86312 212 5 0.86014 311 5 0.60830 147 5 0.54326 90 5 0.69192 61 3 0.58056 46 5 0.48902 91 5 0.66129 193 5 0.78694 346 5 0.71340 303 5 0.79836 298 5 0.80775 256 5 0.76999 306 5 0.88076 0.76727 0.76113 0.83751 0.91326 0.86221 0.75381 0.89071 0.77197 0.90686 0.85881 0.76861 0.88345 0.88830 0.88790 0.94393 0.71763 0.81669 0.78030 0.84823 0.81404 0.85257 0.88278 0.92232 0.86912 0.91511 0.76609 0.81892 0.82144 0.88544 0.90207 0.88067 0.57366 0.44198 0.57083 0.52249 0.59475 0.69132 0.81594 0.82550 0.80567 0.83581 0.82316 3 0.84361 0.86604 -3.1320e-02 5 0.72353 0.88882 -0.1652843 0.99990 0.169059 insignificant 1 1 insignificant 0.99964 0.28789 insignificant 1 1 insignificant -0.0420414 0.25104 lowCoverage 1 lowCoverage 0.84392 0.60191 0.236593 5 0.84412 0.51644 0.327684 1.8907e-15 0.99991 hypermethylated 9.4536e-13 1 hypermethylated 5.9931e-07 0.99724 hypermethylated 0.00029966 1 hypermethylated 0.1883803 0.00045568 lowCoverage 0.15189 lowCoverage 0.84404 0.82571 0.026457 5 0.86639 0.70761 0.158781 0.39526 0.99521862 insignificant 1 1.00000 insignificant 0.27989 0.9717212 insignificant 1 1 insignificant 0.0088149 0.793618 lowCoverage 1 lowCoverage 0.86595 0.60191 0.268276 5 0.87028 0.51644 0.353849 2.2309e-12 1.00000 hypermethylated 1.1155e-09 1 hypermethylated 4.0952e-06 1.00000 hypermethylated 0.0020476 1 hypermethylated 0.23042169 0.00010477 lowCoverage 0.034923 lowCoverage 0.86595 0.82626 0.0563247 5 0.87028 0.82554 0.0447434 0.014682 0.9985534 weaklyHypermeth 1 1 insignificant 0.049207 0.9783210 weaklyHypermeth 1 1 insignificant 0.0508563 0.082435 lowCoverage 1 lowCoverage 0.60191 0.82626 -0.212456 5 0.51644 0.82554 -0.309105 0.99586 2.9443e-05 hypomethylated 1 0.0073607 hypomethylated 0.99026 7.2881e-05 hypomethylated 1 0.036441 hypomethylated -0.179565 0.0010316 lowCoverage 0.51581 lowCoverage chr4 178404871 178405871 52377 ENSG00000222859 0.83473 268 7 0.63609 319 7 0.73989 133 7 0.80012 201 7 0.79786 843 7 0.81823 246 7 0.79428 753 7 0.81487 679 7 0.74081 597 7 0.79809 562 7 0.78872 899 7 0.79459 491 4 0.83481 934 7 0.84264 94 4 0.80051 751 7 0.67192 384 4 0.63937 695 4 0.76652 222 7 0.76779 741 4 0.74712 213 7 0.65312 235 7 0.78930 108 7 0.74790 238 7 0.71176 176 7 0.84533 63 4 0.84075 319 7 0.71177 206 7 0.70990 154 7 0.82847 927 7 0.76867 285 7 0.84167 303 7 0.81545 276 7 0.69625 222 7 0.74943 692 7 0.84057 245 7 0.88053 44 4 0.63632 221 7 0.80163 247 7 0.79113 261 7 0.80904 308 7 0.79860 261 7 0.79029 303 7 0.81701 252 7 0.74300 0.58485 0.67342 0.64699 0.70829 0.78718 0.66839 0.68252 0.63823 0.72204 0.69417 0.65253 0.71228 0.77845 0.72251 0.61226 0.46169 0.68122 0.72513 0.71713 0.64194 0.75380 0.65426 0.60951 0.89861 0.73615 0.63887 0.66609 0.74793 0.71877 0.72408 0.72543 0.57993 0.61353 0.74686 0.78833 0.59584 0.70795 0.68137 0.69828 0.67731 0.64184 0.68521 4 0.65756 0.70973 -3.5042e-02 7 0.76922 0.77597 -0.0067437 0.54872 0.013796 weaklyHypometh 1 1 insignificant 0.48888 0.24609 insignificant 1 1 insignificant -0.0005588 0.98092 insignificant 1 insignificant 0.65756 0.64093 0.035656 7 0.76922 0.73385 0.035372 8.3344e-02 0.92343 insignificant 1.0000e+00 1 insignificant 2.8731e-01 0.66447 insignificant 1.00000000 1 insignificant 0.0039928 0.92307618 insignificant 1.00000 insignificant 0.65756 0.72708 -0.018813 7 0.76922 0.80135 -0.032127 0.17217 0.00018939 weaklyHypometh 1 0.08358 weaklyHypometh 0.37286 0.0043582 weaklyHypometh 1 1 insignificant -0.0297652 0.052041 insignificant 1 insignificant 0.70973 0.64093 0.071185 7 0.77597 0.73385 0.042115 4.0123e-03 0.94333 weaklyHypermeth 2.0061e-01 1 insignificant 3.2623e-01 0.50283 insignificant 1.0000000 1 insignificant 0.00455162 0.91608327 insignificant 1.000000 insignificant 0.70973 0.72708 0.0187878 7 0.77597 0.80135 -0.0253837 0.268566 0.0035236 inconclusive 1 1 insignificant 0.550502 0.0086201 inconclusive 1 1 insignificant -0.0292064 0.157126 insignificant 1 insignificant 0.64093 0.72708 -0.050459 7 0.73385 0.80135 -0.067499 0.73431 1.2334e-03 weaklyHypometh 1 0.2055734 insignificant 0.73406 7.2583e-02 insignificant 1 1.000000 insignificant -0.033758 0.4104510 insignificant 1.00000 insignificant chr4 179444697 179445697 52461 ENSG00000221499 0.80404 45 5 0.89595 170 4 0.81874 108 4 0.82222 27 2 0.78083 82 4 0.79130 61 4 0.95599 168 4 0.87643 139 5 0.91682 114 4 0.92674 131 4 0.89266 184 5 0.89761 97 4 0.98506 141 5 NA 0 0 0.75458 106 4 0.97917 72 4 0.92700 109 4 0.90795 36 2 0.95488 140 4 1.00000 24 2 0.98261 73 4 0.95000 10 0 0.85324 62 5 0.62564 50 5 1.00000 9 1 0.94843 219 5 0.84935 40 4 0.90465 55 4 0.90497 152 5 0.99064 200 5 0.95917 191 5 0.89778 65 5 0.56239 189 5 0.61890 141 5 0.80877 65 3 0.50000 9 0 0.78639 62 4 0.86741 210 5 0.95682 37 4 0.97500 56 5 0.90000 26 3 0.69506 32 4 0.97500 23 1 0.90486 0.87720 0.81967 0.96531 0.97287 0.98878 0.95833 0.91754 0.87659 0.92178 0.91929 0.88978 0.97737 NA 0.93564 0.97312 0.93408 0.95161 0.94091 1.00000 0.97195 1.00000 0.85387 0.74028 0.94881 0.95045 0.94721 0.90851 0.91754 0.98639 0.97248 0.96416 0.66342 0.60964 0.85002 0.74194 0.70780 0.89674 0.95858 0.95968 1.00000 0.88764 1.00000 0 0.91351 0.93339 -2.6090e-02 4 0.87591 0.92451 -0.0485997 0.99318 0.045427 lowCoverage 1 1 lowCoverage 0.90539 0.40630 lowCoverage 1 1 lowCoverage -0.0166982 0.62759 lowCoverage 1 lowCoverage 0.91351 0.72929 0.180699 4 0.87591 0.71561 0.160299 2.0372e-13 0.99951 lowCoverage 6.7906e-11 1 lowCoverage 4.1996e-06 0.99977 lowCoverage 0.00139986 1 lowCoverage 0.1981995 0.02153726 lowCoverage 1.00000 lowCoverage 0.91351 0.93103 -0.033804 4 0.87591 0.91490 -0.038984 0.98063 0.11527870 lowCoverage 1 1.00000 lowCoverage 0.96661 0.0649633 lowCoverage 1 1 lowCoverage -0.0115351 0.844598 lowCoverage 1 lowCoverage 0.93339 0.72929 0.199655 5 0.92451 0.71561 0.208899 9.4720e-11 1.00000 weaklyHypermeth 3.1573e-08 1 weaklyHypermeth 1.9061e-05 0.99994 weaklyHypermeth 0.0063537 1 weaklyHypermeth 0.21489773 0.01469863 lowCoverage 1.000000 lowCoverage 0.93339 0.93103 0.0016030 4 0.92451 0.91490 0.0096154 0.598091 0.6706249 lowCoverage 1 1 lowCoverage 0.867931 0.1676385 lowCoverage 1 1 lowCoverage 0.0051632 0.934710 lowCoverage 1 lowCoverage 0.72929 0.93103 -0.205931 4 0.71561 0.91490 -0.199283 0.99994 4.0345e-06 lowCoverage 1 0.0013448 lowCoverage 0.99994 1.7922e-04 lowCoverage 1 0.059741 lowCoverage -0.209735 0.0293259 lowCoverage 1.00000 lowCoverage chr4 183002623 183003623 52864 ENSG00000214628 0.86115 224 6 0.71393 75 6 0.68384 99 6 0.84471 91 6 0.84444 45 5 0.82147 163 6 0.80461 66 6 0.79583 56 5 0.87912 53 4 0.83137 69 5 0.82353 154 6 0.83081 69 6 0.81950 65 6 NA 0 0 0.90107 61 5 0.85820 41 6 0.67895 83 6 0.78347 140 6 0.75565 103 6 0.87470 150 6 0.93981 38 4 0.87500 26 3 0.77992 121 6 0.75000 33 4 0.97222 24 3 0.81026 121 6 0.88000 20 3 0.78175 38 5 0.77496 71 5 0.77345 110 6 0.79667 128 6 0.85361 249 6 0.69786 63 5 0.58704 101 6 0.72955 104 6 0.87540 65 6 0.74714 64 4 0.80060 115 6 0.83150 197 6 0.81193 211 6 0.79105 160 6 0.80791 199 6 0.83926 203 6 0.88220 0.75998 0.68405 0.89285 0.89252 0.82931 0.76327 0.78232 0.83545 0.82636 0.83960 0.83798 0.82076 NA 0.88148 0.86182 0.71203 0.81361 0.77703 0.87282 0.91738 0.84455 0.77323 0.85337 0.96261 0.80871 0.85785 0.70192 0.80786 0.77398 0.82641 0.84055 0.65696 0.60808 0.73968 0.86935 0.77820 0.78776 0.84869 0.81105 0.81107 0.82092 0.87345 3 0.81240 0.82431 -1.0080e-02 6 0.80493 0.82258 -0.0176498 0.75791 0.176892 insignificant 1 1 insignificant 0.74591 0.11964 insignificant 1 1 insignificant -0.0214428 0.40498 lowCoverage 1 lowCoverage 0.81240 0.74414 0.073107 6 0.80493 0.73727 0.067664 1.7991e-04 0.99396 weaklyHypermeth 1.2851e-02 1 weaklyHypermeth 2.0254e-03 0.99775 weaklyHypermeth 0.16878737 1 insignificant 0.0712624 0.13991878 insignificant 1.00000 insignificant 0.81240 0.81753 -0.014740 6 0.80493 0.81701 -0.012072 0.83184 0.34846116 insignificant 1 1.00000 insignificant 0.72303 0.3319324 insignificant 1 1 insignificant -0.0054694 0.749137 insignificant 1 insignificant 0.82431 0.74414 0.081726 6 0.82258 0.73727 0.085313 5.3524e-04 0.99895 weaklyHypermeth 3.3958e-02 1 weaklyHypermeth 2.3696e-03 0.99998 weaklyHypermeth 0.2496889 1 insignificant 0.09270520 0.07300109 lowCoverage 1.000000 lowCoverage 0.82431 0.81753 -0.0034198 6 0.82258 0.81701 0.0055773 0.508629 0.3353743 insignificant 1 1 insignificant 0.280392 0.6727001 insignificant 1 1 insignificant 0.0159734 0.486983 lowCoverage 1 lowCoverage 0.74414 0.81753 -0.086828 6 0.73727 0.81701 -0.079736 0.99058 2.0283e-03 weaklyHypometh 1 0.2237821 insignificant 0.99110 1.1121e-02 weaklyHypometh 1 1.000000 insignificant -0.076732 0.1127340 insignificant 1.00000 insignificant chr4 183492409 183493409 52995 ODZ3 ENSG00000218336 0.76745 219 5 0.65467 145 6 0.61111 19 1 0.89545 234 6 0.80635 32 4 0.87982 185 6 0.69571 36 4 0.73316 70 5 0.75411 34 4 0.93333 19 1 0.85497 225 6 0.60000 17 0 0.82083 49 5 0.90000 38 4 0.91212 54 4 1.00000 6 0 0.47917 11 0 0.80963 125 5 0.82073 120 5 0.82726 183 5 0.60000 16 2 0.91429 29 4 0.87778 64 5 0.87004 45 5 0.89861 96 5 0.84476 162 5 0.80278 31 4 0.50000 6 0 0.71905 86 5 0.74108 140 6 0.80456 127 5 0.85514 238 6 0.76287 128 5 0.83059 99 5 0.84384 224 5 0.90000 14 1 0.67224 76 5 0.70209 179 5 0.86433 145 5 0.89504 220 6 0.85096 210 6 0.78667 41 5 0.89539 198 6 0.88419 0.68438 0.51691 0.89534 0.79664 0.86817 0.69224 0.72093 0.74791 0.94686 0.83861 0.59496 0.83877 0.89855 0.92995 0.99713 0.54182 0.84535 0.82676 0.80279 0.77550 0.92340 0.86437 0.85050 0.87826 0.82387 0.78164 0.67982 0.75552 0.70086 0.76104 0.84288 0.70533 0.78205 0.83185 0.92029 0.68847 0.72257 0.92123 0.87217 0.82900 0.78647 0.88551 1 0.85722 0.86731 1.6530e-05 5 0.71261 0.71497 -0.0023523 0.84262 0.315482 insignificant 1 1 insignificant 0.97236 0.17549 insignificant 1 1 insignificant 0.0021209 0.96405 lowCoverage 1 lowCoverage 0.85769 0.82778 0.052088 5 0.83138 0.77621 0.055176 5.0187e-02 0.99760 insignificant 1.0000e+00 1 insignificant 3.5887e-01 0.93306 insignificant 1.00000000 1 insignificant 0.0025233 0.95724677 lowCoverage 1.00000 lowCoverage 0.85769 0.90786 -0.035665 5 0.83138 0.87817 -0.046785 0.98121 0.09933486 insignificant 1 1.00000 insignificant 0.88863 0.2168405 insignificant 1 1 insignificant -0.0706822 0.057433 lowCoverage 1 lowCoverage 0.86814 0.82778 0.050090 5 0.83413 0.77621 0.057920 3.5778e-02 0.99478 weaklyHypermeth 1.0000e+00 1 insignificant 1.0309e-01 0.96629 insignificant 1.0000000 1 insignificant 0.00040233 0.99385297 lowCoverage 1.000000 lowCoverage 0.86814 0.90786 -0.0328670 5 0.83413 0.87817 -0.0440405 0.718298 0.1540339 insignificant 1 1 insignificant 0.356769 0.1788429 insignificant 1 1 insignificant -0.0728031 0.100935 lowCoverage 1 lowCoverage 0.82778 0.90786 -0.078863 5 0.77621 0.87817 -0.101961 0.99904 3.9596e-03 weaklyHypometh 1 0.3299677 insignificant 0.97856 1.9852e-01 insignificant 1 1.000000 insignificant -0.073205 0.1147787 lowCoverage 1.00000 lowCoverage chr4 184031927 184032927 53084 ENSG00000221186 0.93090 162 4 0.88259 252 5 0.84446 152 5 0.97303 126 5 0.97098 98 5 0.93884 232 5 0.75527 102 5 0.97432 133 5 0.90830 114 5 0.94961 121 5 0.85636 252 5 0.88094 76 5 0.94225 159 5 0.92905 88 5 0.90902 167 5 0.90000 45 5 0.49973 918 1 0.95267 173 4 0.83403 146 4 0.93506 166 5 0.86212 59 5 0.89583 80 4 0.93517 121 5 0.73490 82 5 0.91667 41 4 0.93083 207 5 0.93570 122 5 0.97768 84 5 0.81854 114 5 0.94854 228 5 0.92556 155 5 0.93036 180 5 0.85733 158 5 0.880556 67 5 0.63209 204 5 1.00000 13 1 0.79882 171 5 0.80977 152 5 0.85865 124 5 0.97488 130 5 0.92688 127 4 0.71270 113 4 0.90597 175 7 0.93574 0.85323 0.87170 0.96335 0.95457 0.94924 0.76666 0.98145 0.92649 0.94918 0.86723 0.87031 0.94167 0.94339 0.91592 0.92151 0.68056 0.94128 0.91131 0.94113 0.90454 0.87705 0.93301 0.78586 0.94045 0.91615 0.94736 0.97778 0.82476 0.92624 0.90745 0.93899 0.901396 0.9569337 0.968319 0.97561 0.86751 0.94488 0.83982 0.97679 0.97078 0.82281 0.87511 4 0.93427 0.91848 0.0085220 5 0.91251 0.91046 0.00204981 0.16749 0.1787942 insignificant 1 1 insignificant 0.238911 0.4802817 insignificant 1 1 insignificant -0.012622 0.683518 lowCoverage 1 lowCoverage 0.93427 0.83486 0.049693 5 0.91251 0.84056 0.0719541 2.2435e-04 0.13759 weaklyHypermeth 7.0110e-03 1 weaklyHypermeth 9.8916e-02 0.014362 inconclusive 1.0000e+00 1 insignificant 0.058609 0.31730030 lowCoverage 1.000000 lowCoverage 0.93427 0.88316 0.052886 5 0.91251 0.89455 0.0179623 0.0516202 0.1837980 insignificant 1.00000 1 insignificant 0.129456 0.148793 insignificant 1 1 insignificant 0.0125535 0.81246 lowCoverage 1 lowCoverage 0.91853 0.83377 0.090397 5 0.92538 0.70046 0.224920 2.1938e-03 0.13950 weaklyHypermeth 6.0939e-02 1 weaklyHypermeth 1.8929e-01 0.048338 inconclusive 1.0000e+00 1 insignificant 0.071231 2.2254e-01 lowCoverage 1.000000 lowCoverage 0.91853 0.88404 0.026615 5 0.92538 0.91212 0.013260 1.5170e-01 0.36111 insignificant 1.0000e+00 1 insignificant 0.12969039 0.23896 insignificant 1.000000 1 insignificant 0.0251758 0.625960 lowCoverage 1 lowCoverage 0.83268 0.88490 -0.0055199 5 0.60040 0.92468 -0.324280 0.70830 4.6627e-01 insignificant 1 1.0000e+00 insignificant 0.75096 6.6569e-01 insignificant 1 1.0000e+00 insignificant -0.046055 0.50674302 lowCoverage 1.000000 lowCoverage chr4 184032119 184033119 53085 ENSG00000221186 0.93090 162 4 0.88259 252 5 0.84446 152 5 0.97303 126 5 0.97098 98 5 0.93884 232 5 0.75527 102 5 0.97432 133 5 0.90830 114 5 0.94961 121 5 0.85636 252 5 0.88094 76 5 0.94225 159 5 0.92905 88 5 0.90902 167 5 0.90000 45 5 0.49973 918 1 0.95267 173 4 0.83403 146 4 0.93506 166 5 0.86212 59 5 0.89583 80 4 0.93517 121 5 0.73490 82 5 0.91667 41 4 0.93083 207 5 0.93570 122 5 0.97768 84 5 0.81854 114 5 0.94854 228 5 0.92556 155 5 0.93036 180 5 0.85733 158 5 0.880556 67 5 0.63209 204 5 1.00000 13 1 0.79882 171 5 0.80977 152 5 0.85865 124 5 0.97488 130 5 0.92688 127 4 0.71270 113 4 0.90597 175 7 0.93574 0.85323 0.87170 0.96335 0.95457 0.94924 0.76666 0.98145 0.92649 0.94918 0.86723 0.87031 0.94167 0.94339 0.91592 0.92151 0.68056 0.94128 0.91131 0.94113 0.90454 0.87705 0.93301 0.78586 0.94045 0.91615 0.94736 0.97778 0.82476 0.92624 0.90745 0.93899 0.901396 0.9569337 0.968319 0.97561 0.86751 0.94488 0.83982 0.97679 0.97078 0.82281 0.87511 4 0.93427 0.91848 0.0085220 5 0.91251 0.91046 0.00204981 0.16749 0.1787942 insignificant 1 1 insignificant 0.238911 0.4802817 insignificant 1 1 insignificant -0.012622 0.683518 lowCoverage 1 lowCoverage 0.93427 0.83486 0.049693 5 0.91251 0.84056 0.0719541 2.2435e-04 0.13759 weaklyHypermeth 7.0110e-03 1 weaklyHypermeth 9.8916e-02 0.014362 inconclusive 1.0000e+00 1 insignificant 0.058609 0.31730030 lowCoverage 1.000000 lowCoverage 0.93427 0.88316 0.052886 5 0.91251 0.89455 0.0179623 0.0516202 0.1837980 insignificant 1.00000 1 insignificant 0.129456 0.148793 insignificant 1 1 insignificant 0.0125535 0.81246 lowCoverage 1 lowCoverage 0.91853 0.83377 0.090397 5 0.92538 0.70046 0.224920 2.1938e-03 0.13950 weaklyHypermeth 6.0939e-02 1 weaklyHypermeth 1.8929e-01 0.048338 inconclusive 1.0000e+00 1 insignificant 0.071231 2.2254e-01 lowCoverage 1.000000 lowCoverage 0.91853 0.88404 0.026615 5 0.92538 0.91212 0.013260 1.5170e-01 0.36111 insignificant 1.0000e+00 1 insignificant 0.12969039 0.23896 insignificant 1.000000 1 insignificant 0.0251758 0.625960 lowCoverage 1 lowCoverage 0.83268 0.88490 -0.0055199 5 0.60040 0.92468 -0.324280 0.70830 4.6627e-01 insignificant 1 1.0000e+00 insignificant 0.75096 6.6569e-01 insignificant 1 1.0000e+00 insignificant -0.046055 0.50674302 lowCoverage 1.000000 lowCoverage chr4 189169337 189170337 53249 ZFP42 ENSG00000179059 0.87325 177 7 0.51890 121 6 0.64249 124 7 0.77590 182 7 0.87001 41 5 0.62685 207 7 0.78456 95 7 0.82506 87 6 0.75615 76 7 0.75288 82 7 0.72562 209 7 0.72829 53 4 0.85484 92 7 0.62667 21 2 0.73836 113 7 0.45635 33 3 0.87448 33 4 0.76597 150 7 0.73460 109 7 0.77183 173 7 0.71917 42 4 0.71865 54 6 0.74376 124 7 0.61111 30 5 0.74907 63 7 0.77258 133 7 0.68367 45 2 0.62500 15 1 0.70510 118 6 0.70243 112 7 0.83896 115 6 0.75596 236 7 0.78640 83 5 0.594298 79 7 0.69829 153 7 0.78373 43 3 0.48413 55 6 0.79898 142 7 0.79803 176 7 0.77434 205 7 0.74228 216 7 0.77931 184 7 0.76582 161 7 0.91508 0.70934 0.72985 0.84660 0.86871 0.82577 0.81767 0.80357 0.78811 0.81847 0.78529 0.77431 0.85132 0.77281 0.80962 0.67732 0.86520 0.83864 0.82438 0.81391 0.77387 0.82866 0.76589 0.72582 0.82297 0.82956 0.84638 0.78767 0.75468 0.76695 0.84131 0.82312 0.771392 0.7016918 0.787412 0.82767 0.64612 0.79524 0.87946 0.85207 0.81468 0.83944 0.85538 2 0.78880 0.78013 0.0036142 7 0.73316 0.75507 -0.02191715 0.49713 0.4834239 insignificant 1 1 insignificant 0.648775 0.4160910 insignificant 1 1 insignificant 0.016366 0.601285 insignificant 1 insignificant 0.78880 0.71712 0.066559 7 0.73316 0.73466 -0.0015082 3.4415e-03 0.92277 weaklyHypermeth 9.8329e-02 1 weaklyHypermeth 6.5267e-02 0.753112 insignificant 1.0000e+00 1 insignificant 0.044184 0.46902524 insignificant 1.000000 insignificant 0.78950 0.81529 -0.022517 7 0.75626 0.76907 -0.0128066 0.8836334 0.1577838 insignificant 1.00000 1 insignificant 0.890188 0.062310 insignificant 1 1 insignificant -0.0368015 0.18442 insignificant 1 insignificant 0.78013 0.71712 0.060911 7 0.75507 0.73466 0.020409 4.5817e-02 0.98153 weaklyHypermeth 1.0000e+00 1 insignificant 1.9453e-01 0.934380 insignificant 1.0000e+00 1 insignificant 0.027818 6.3125e-01 insignificant 1.000000 insignificant 0.78024 0.81529 -0.024522 7 0.75580 0.76907 -0.013269 8.6364e-01 0.16595 insignificant 1.0000e+00 1 insignificant 0.74140259 0.30122 insignificant 1.000000 1 insignificant -0.0531670 0.018547 weaklyHypometh 1 insignificant 0.71661 0.81529 -0.0877036 7 0.69676 0.76907 -0.072307 0.98262 1.9545e-03 weaklyHypometh 1 1.3961e-01 insignificant 0.85392 1.1375e-02 weaklyHypometh 1 8.1253e-01 insignificant -0.080985 0.18325630 insignificant 1.000000 insignificant chr5 2243700 2244700 53339 ENSG00000201026 0.78290 157 5 0.91088 239 5 0.87485 51 5 0.96750 173 5 0.92262 80 6 0.95835 189 5 0.89408 76 5 0.80249 76 5 0.85357 42 3 0.96104 31 4 0.92645 169 5 1.00000 8 0 0.95000 13 1 0.84722 32 2 0.89259 22 2 1.00000 14 2 1.00000 72 1 0.90739 115 3 0.97888 68 3 0.92386 105 5 0.75000 38 3 0.86667 13 1 0.77920 87 4 0.74170 53 5 0.89644 66 5 0.97018 164 5 0.91587 49 3 0.61111 19 1 0.92682 86 3 0.94360 154 5 0.94069 179 5 0.97010 167 6 0.34299 208 6 0.086250 103 5 0.31905 217 5 0.38889 21 1 0.32051 191 5 0.64336 198 5 0.92735 220 5 0.73075 209 5 0.92392 242 5 0.89181 88 3 0.87157 269 7 0.96645 0.85639 0.92521 0.93124 0.92634 0.94452 0.84590 0.89996 0.81696 0.93947 0.90937 0.99031 0.91071 0.87351 0.88545 0.99031 0.94581 0.79642 0.95484 0.90324 0.64286 0.81548 0.92454 0.81530 0.79270 0.96819 0.84846 1.00000 0.87089 0.92335 0.91270 0.97396 0.121858 0.0061384 0.015625 0.59524 0.09585 0.30395 0.89422 0.87239 0.86973 0.85884 0.84025 0 0.89919 0.91479 -0.0156207 5 0.83823 0.86114 -0.02291075 0.99988 0.6177497 insignificant 1 1 insignificant 0.991459 0.9666735 insignificant 1 1 insignificant 0.058367 0.121755 lowCoverage 1 lowCoverage 0.89977 0.17396 0.724277 5 0.92206 0.38389 0.5381669 1.3876e-44 1.00000 hypermethylated 6.9382e-42 1 hypermethylated 8.0062e-11 1.000000 hypermethylated 4.0031e-08 1 hypermethylated 0.567558 0.00043555 lowCoverage 0.052009 lowCoverage 0.89977 0.87549 0.030975 5 0.92206 0.80891 0.1131475 0.1046647 0.9947286 insignificant 1.00000 1 insignificant 0.057073 0.999751 insignificant 1 1 insignificant 0.0486502 0.26185 lowCoverage 1 lowCoverage 0.91651 0.17415 0.719764 5 0.89726 0.43389 0.463369 1.5131e-34 1.00000 hypermethylated 7.5657e-32 1 hypermethylated 6.1337e-09 1.000000 hypermethylated 3.0669e-06 1 hypermethylated 0.509191 3.5492e-04 lowCoverage 0.035492 lowCoverage 0.91549 0.87524 0.048221 5 0.79726 0.85891 -0.061651 2.2621e-03 0.95986 weaklyHypermeth 1.1424e-01 1 insignificant 0.18370387 0.99632 insignificant 1.000000 1 insignificant -0.0097171 0.845659 lowCoverage 1 lowCoverage 0.17049 0.87488 -0.6992718 5 0.44911 0.78391 -0.334802 0.99213 4.4344e-16 hypomethylated 1 2.2172e-13 hypomethylated 0.99914 1.0441e-04 hypomethylated 1 2.6102e-02 hypomethylated -0.518908 0.00032835 lowCoverage 0.097457 lowCoverage chr5 2599948 2600948 53353 ENSG00000201026 0.97968 84 6 0.76028 159 9 0.71621 67 8 0.99048 43 3 1.00000 29 2 0.96254 242 9 0.88000 77 9 0.74977 83 7 0.92500 30 1 0.96875 32 0 0.95427 260 10 0.94709 33 2 1.00000 52 6 1.00000 13 2 0.90813 81 8 0.61905 30 2 0.81481 25 2 0.88489 56 2 0.97222 81 8 0.88480 260 8 0.86250 48 5 0.00000 1 0 0.94406 87 8 0.93434 66 4 1.00000 2 0 0.99138 157 9 0.93122 34 3 1.00000 29 2 0.91176 109 8 0.98401 176 9 0.94810 157 10 0.94721 181 9 0.23053 88 9 0.035669 91 8 0.30947 158 7 0.19444 11 0 0.14409 56 2 0.69529 157 9 0.87849 142 7 0.91476 114 8 0.90388 59 2 0.99346 62 6 0.80810 79 5 0.97058 0.92958 0.64787 0.96790 0.92042 0.96322 0.85503 0.73841 0.96296 0.95370 0.96089 0.97002 1.00000 0.89326 0.86560 0.59553 0.78483 0.87810 0.97222 0.84680 0.98611 NA 0.93240 0.89057 0.93746 0.99235 0.91623 0.99859 0.88889 0.98203 0.95344 0.95875 0.081871 0.0435840 0.146482 0.27432 0.20269 0.70841 0.89463 0.90594 0.96767 0.99564 0.82011 0 0.91633 0.95129 -0.0322332 8 0.84078 0.87060 -0.02982775 0.99741 0.0438531 weaklyHypometh 1 1 insignificant 0.983355 0.0320117 weaklyHypometh 1 1 insignificant 0.024684 0.772653 insignificant 1 insignificant 0.91681 0.31373 0.615095 8 0.90893 0.28527 0.6236574 4.8474e-50 1.00000 hypermethylated 4.8474e-47 1 hypermethylated 7.8198e-19 1.000000 hypermethylated 7.8198e-16 1 hypermethylated 0.627649 0.00076290 hypermethylated 0.058684 hypermethylated 0.91681 0.81579 0.086321 5 0.90893 0.89985 0.0090831 0.0006501 0.0942440 weaklyHypermeth 0.06501 1 weaklyHypermeth 0.085593 0.078702 insignificant 1 1 insignificant -0.0038392 0.92273 insignificant 1 insignificant 0.95215 0.31373 0.633457 8 0.94472 0.28527 0.659451 1.5093e-38 1.00000 hypermethylated 1.5093e-35 1 hypermethylated 5.4247e-18 1.000000 hypermethylated 5.4247e-15 1 hypermethylated 0.602965 3.5143e-04 hypermethylated 0.035492 hypermethylated 0.95215 0.81579 0.127164 5 0.94472 0.89985 0.044876 4.1044e-03 0.54087 weaklyHypermeth 1.7845e-01 1 insignificant 0.08690599 0.83813 insignificant 1.000000 1 insignificant -0.0285234 0.743611 insignificant 1 insignificant 0.31373 0.81579 -0.4822004 5 0.28527 0.89985 -0.614574 1.00000 5.0400e-18 hypomethylated 1 5.0400e-15 hypomethylated 1.00000 9.9879e-11 hypomethylated 1 9.9879e-08 hypomethylated -0.631488 0.00065463 hypomethylated 0.109105 insignificant chr5 10112024 10113024 53545 ENSG00000222054 0.72003 251 9 0.73157 168 10 0.71713 98 9 0.79547 180 9 0.74685 92 9 0.82762 199 9 0.77311 119 9 0.79957 173 9 0.72751 53 4 0.87833 79 9 0.78314 206 9 0.77833 44 5 0.83535 160 9 0.84167 67 7 0.71835 122 9 0.77222 32 4 0.82540 25 2 0.59224 191 8 0.69284 79 6 0.81282 165 7 0.82778 35 2 0.92664 35 2 0.70320 107 5 0.72003 77 5 0.66279 79 3 0.79110 210 9 0.74902 55 2 0.82672 32 2 0.84395 168 9 0.85336 238 9 0.80500 129 8 0.78910 243 10 0.65926 173 9 0.755714 108 9 0.55099 344 10 0.13333 12 2 0.59565 78 9 0.67744 213 10 0.71020 240 9 0.77739 212 9 0.62682 213 9 0.79142 130 2 0.68770 177 9 0.76153 0.70180 0.69744 0.82836 0.78038 0.81990 0.81264 0.82146 0.71338 0.89271 0.80680 0.79106 0.86333 0.82624 0.78763 0.77319 0.78494 0.70730 0.80830 0.80989 0.87762 0.92721 0.75796 0.81441 0.78326 0.82895 0.77792 0.85619 0.88942 0.88025 0.85000 0.80943 0.525552 0.7949879 0.359982 NA 0.52523 0.55687 0.73793 0.77156 0.74412 0.78729 0.73169 2 0.78792 0.83097 -0.0299069 9 0.77987 0.78376 -0.00389793 0.65504 0.0082655 weaklyHypometh 1 1 insignificant 0.908842 0.0037499 weaklyHypometh 1 1 insignificant -0.023079 0.378245 insignificant 1 insignificant 0.78792 0.42565 0.332714 9 0.77987 0.63725 0.1426133 3.9707e-14 0.97696 hypermethylated 3.9707e-12 1 hypermethylated 1.8772e-05 0.998618 hypermethylated 1.8772e-03 1 hypermethylated 0.206413 0.07130192 insignificant 1.000000 insignificant 0.78768 0.77216 0.038936 9 0.73681 0.71269 0.0241219 0.0033704 0.9959309 weaklyHypermeth 0.19826 1 insignificant 0.088216 0.955435 insignificant 1 1 insignificant 0.0497744 0.18778 insignificant 1 insignificant 0.83097 0.42565 0.386756 9 0.78376 0.63725 0.146511 2.3885e-13 0.97848 hypermethylated 2.9857e-11 1 hypermethylated 2.7583e-06 0.999879 hypermethylated 5.5165e-04 1 hypermethylated 0.229492 5.1595e-02 insignificant 1.000000 insignificant 0.83097 0.77122 0.077459 9 0.78376 0.66045 0.123315 3.7119e-08 0.99953 weaklyHypermeth 7.4237e-06 1 weaklyHypermeth 0.00063515 0.99996 weaklyHypermeth 0.090735 1 weaklyHypermeth 0.0728534 0.082550 insignificant 1 insignificant 0.42565 0.77122 -0.3783606 9 0.63725 0.66045 -0.023196 0.92642 5.7250e-04 hypomethylated 1 4.4039e-02 hypomethylated 0.97474 4.7142e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.156638 0.15080358 insignificant 1.000000 insignificant chr5 11183129 11184129 53565 ENSG00000207312 0.97500 53 5 0.88329 149 5 0.75317 127 5 1.00000 6 0 0.96311 147 5 0.81426 61 5 0.85371 132 5 0.95778 178 5 0.78013 109 5 0.94413 157 5 0.88923 152 5 0.92394 101 5 0.93533 196 5 NA 0 0 0.95982 148 5 0.91218 75 5 0.86614 81 5 1.00000 11 0 0.95993 193 5 0.80833 29 2 0.75079 45 5 0.50000 4 0 0.94917 83 5 0.92842 62 5 NA 0 0 0.96764 218 5 0.85619 34 4 0.92000 23 4 0.89820 186 5 0.98588 245 5 0.94272 176 5 0.96667 63 5 0.62246 201 5 0.437652 128 5 0.63194 144 4 0.50000 2 0 0.60142 61 5 0.66655 200 5 0.76000 22 4 0.84687 45 5 0.83333 6 0 0.75000 3 0 1.00000 10 0 0.99038 0.87019 0.75122 1.00000 0.97150 0.86503 0.86652 0.97661 0.81380 0.94985 0.89586 0.95089 0.93676 NA 0.95779 0.90212 0.85100 1.00000 0.96180 0.70833 0.83822 0.51894 0.98045 0.92389 NA 0.95661 0.81136 0.96923 0.92096 0.99004 0.93718 0.98718 0.555810 0.4274369 0.392735 0.53312 0.58602 0.71554 0.84615 0.80124 0.83818 0.77407 1.00000 0 0.90356 0.93854 -0.0354108 5 0.90348 0.94201 -0.03852949 0.99805 0.0186145 weaklyHypometh 1 1 insignificant 0.931976 0.1846766 insignificant 1 1 insignificant 0.025486 0.588903 lowCoverage 1 lowCoverage 0.90356 0.59511 0.315909 5 0.90348 0.60161 0.3018753 1.2500e-20 0.99927 hypermethylated 2.4999e-18 1 hypermethylated 3.2759e-07 0.999969 hypermethylated 8.1897e-05 1 hypermethylated 0.327513 0.00005784 lowCoverage 0.014460 lowCoverage 0.90356 0.81395 0.089398 0 0.90348 0.82000 0.0834829 0.0027206 0.9875643 noCoverage 0.17004 1 noCoverage 0.677421 0.711822 noCoverage 1 1 noCoverage 0.0661430 0.22393 lowCoverage 1 lowCoverage 0.93854 0.59511 0.347591 5 0.94201 0.60161 0.340405 1.0339e-14 0.99997 hypermethylated 2.0678e-12 1 hypermethylated 4.0828e-05 0.999844 hypermethylated 3.7116e-03 1 hypermethylated 0.302027 8.1949e-05 lowCoverage 0.020487 lowCoverage 0.93854 0.81395 0.126772 0 0.94201 0.82000 0.122012 1.5580e-03 0.99964 noCoverage 9.7377e-02 1 noCoverage 0.55748161 0.87136 noCoverage 1.000000 1 noCoverage 0.0406572 0.525092 lowCoverage 1 lowCoverage 0.59511 0.81395 -0.2228882 0 0.60161 0.82000 -0.218392 0.98838 4.8504e-03 noCoverage 1 2.8532e-01 noCoverage 0.99835 1.7100e-02 noCoverage 1 1.0000e+00 noCoverage -0.261370 0.00181466 lowCoverage 0.226833 lowCoverage chr5 18085076 18086076 53714 ENSG00000185041 0.88182 263 5 0.86502 113 5 0.80349 79 5 0.93432 246 5 0.92143 34 5 0.86028 295 5 0.95000 23 2 0.95384 112 5 0.90833 52 5 0.95714 73 5 0.86448 131 5 0.84286 23 3 0.95714 91 5 NA 0 0 0.93506 46 5 0.95000 18 1 1.00000 18 0 0.90363 315 5 0.96364 54 5 0.91713 264 5 0.85833 44 3 0.90964 105 5 0.92473 147 5 0.77108 41 5 0.83056 42 5 0.91742 146 5 0.73832 68 5 0.65000 25 2 0.88544 95 5 0.95913 162 5 0.96073 158 5 0.92013 306 5 0.62422 131 5 0.584166 64 5 1.00000 106 3 0.78000 29 2 0.89333 60 5 0.71966 141 5 0.96035 281 5 0.92006 188 5 0.91373 223 5 0.91851 192 5 0.95018 249 5 0.87817 0.85855 0.80188 0.93136 0.92926 0.85814 0.95146 0.96054 0.89968 0.95515 0.86385 0.85853 0.95030 NA 0.93771 0.94660 1.00000 0.90173 0.95587 0.91321 0.85235 0.90559 0.92440 0.76241 0.81243 0.91971 0.74700 0.68689 0.87899 0.95649 0.95974 0.91946 0.596075 0.5495306 0.737035 0.75049 0.88781 0.68102 0.96096 0.92060 0.91148 0.91795 0.95028 0 0.90444 0.90590 -0.0011544 5 0.90124 0.90189 -0.00064428 0.69170 0.6771531 insignificant 1 1 insignificant 0.097094 0.9395506 insignificant 1 1 insignificant 0.053731 0.094243 lowCoverage 1 lowCoverage 0.90444 0.78908 0.120000 5 0.90124 0.70509 0.1961561 1.9336e-14 0.86809 weaklyHypermeth 2.1485e-12 1 weaklyHypermeth 3.5059e-04 0.838195 weaklyHypermeth 1.9477e-02 1 weaklyHypermeth 0.147294 0.07261370 lowCoverage 1.000000 lowCoverage 0.90444 0.93469 -0.031864 5 0.90124 0.93558 -0.0343405 0.9765631 0.0099668 weaklyHypometh 1.00000 1 insignificant 0.583217 0.503278 insignificant 1 1 insignificant -0.0183759 0.23353 lowCoverage 1 lowCoverage 0.90590 0.78908 0.122272 5 0.90189 0.70509 0.196800 3.0940e-08 0.93088 weaklyHypermeth 2.3800e-06 1 weaklyHypermeth 3.0202e-03 0.874330 weaklyHypermeth 1.1186e-01 1 insignificant 0.093563 2.2745e-01 lowCoverage 1.000000 lowCoverage 0.90590 0.93469 -0.030410 5 0.90189 0.93558 -0.033696 9.6759e-01 0.11984 insignificant 1.0000e+00 1 insignificant 0.92348245 0.14992 insignificant 1.000000 1 insignificant -0.0721071 0.028568 lowCoverage 1 lowCoverage 0.78908 0.93469 -0.1481914 5 0.70509 0.93558 -0.230497 0.96583 8.7886e-06 weaklyHypometh 1 8.7886e-04 weaklyHypometh 0.97000 3.3003e-03 weaklyHypometh 1 3.3003e-01 insignificant -0.165670 0.05092008 lowCoverage 1.000000 lowCoverage chr5 32393363 32394363 54446 MTMR12 ENSG00000150712 0.67300 304 10 0.66638 300 10 0.76340 191 10 0.71020 222 10 0.63916 126 10 0.70017 568 10 0.66187 171 10 0.73682 229 10 0.74323 143 9 0.74934 164 10 0.66071 361 10 0.77833 64 3 0.80026 187 10 0.63095 49 6 0.72849 153 10 0.62044 91 5 0.96384 367 2 0.62278 216 10 0.67978 218 8 0.63090 428 10 0.84136 109 8 0.80025 102 9 0.75307 176 8 0.67467 136 10 0.77178 68 9 0.61991 308 10 0.74516 122 9 0.71147 66 5 0.67921 234 8 0.64728 332 10 0.67155 317 10 0.75997 617 10 0.76139 255 10 0.68216 145 10 0.65589 327 8 0.56667 33 3 0.69764 176 10 0.64080 334 10 0.66989 320 10 0.69872 255 10 0.63526 224 8 0.69410 253 10 0.66164 275 10 0.7546 0.7265 0.79465 0.79897 0.7237 0.78156 0.75867 0.81878 0.76783 0.80995 0.78340 0.83922 0.86625 0.79999 0.80321 0.73489 0.96049 0.72559 0.78195 0.79138 0.87593 0.84085 0.81557 0.80163 0.82576 0.8033 0.81466 0.74477 0.77433 0.76582 0.78556 0.81827 0.81408 0.73806 0.77770 0.63589 0.79842 0.70437 0.78462 0.80307 0.76279 0.78948 0.82841 5 0.76033 0.71937 -0.00032135 10 0.70072 0.67916 0.021565 0.45993 0.487895 insignificant 1 1 insignificant 0.86211 0.256864 insignificant 1 1 insignificant -0.0149717 0.57584 insignificant 1 insignificant 0.76033 0.68346 0.023141 10 0.70072 0.68829 0.012435 4.7367e-02 0.56585 weaklyHypermeth 1.0000e+00 1 insignificant 4.5685e-02 0.69361 weaklyHypermeth 1.0000e+00 1 insignificant 0.040579 0.2340141 insignificant 1.00000 insignificant 0.76033 0.78146 0.0036146 10 0.70072 0.62839 0.072335 0.147156 0.073551 insignificant 1 1 insignificant 0.28110 0.17987 insignificant 1 1 insignificant 0.036079 0.10888 insignificant 1 insignificant 0.71937 0.68346 0.025762 10 0.67916 0.68829 -0.0091299 1.1089e-02 0.54012 weaklyHypermeth 5.2806e-01 1 insignificant 5.4220e-03 0.9503 weaklyHypermeth 3.8729e-01 1 insignificant 0.05555 0.118681 insignificant 1.00000 insignificant 0.71937 0.78146 0.010538 10 0.67916 0.62839 0.05077 0.67846765 0.18407 insignificant 1.000000 1 insignificant 0.244020 0.55637 insignificant 1 1 insignificant 0.051051 0.037548 weaklyHypermeth 1 insignificant 0.68346 0.78146 -0.0065485 10 0.68829 0.62839 0.05990 0.30152 3.7869e-03 weaklyHypometh 1 2.7049e-01 insignificant 0.34869 6.3041e-03 weaklyHypometh 1 0.525345 insignificant -0.0044994 0.880560 insignificant 1 insignificant chr5 37701411 37702411 54604 ENSG00000222743 0.88862 156 7 0.78444 228 7 0.82597 128 7 0.92254 155 7 0.73129 72 7 0.80088 153 6 0.86014 142 7 0.79699 186 7 0.83981 116 7 0.84404 176 7 0.84452 206 7 0.67262 101 7 0.53934 243 7 0.77778 28 3 0.77743 169 7 0.64107 63 7 0.38092 188 7 0.62588 159 7 0.56491 173 7 0.74455 131 7 0.60732 40 3 0.67650 58 4 0.88880 190 7 0.62023 70 6 0.83700 36 1 0.77417 291 7 0.73810 81 6 0.77955 41 4 0.80199 255 7 0.83697 295 7 0.66070 309 7 0.63516 151 6 0.29661 338 7 0.16011 185 7 0.62500 11 0 0.35238 35 3 0.56628 108 7 0.07427 345 7 0.79043 174 7 0.66384 176 7 0.71420 135 3 0.80418 99 3 0.35469 158 7 0.8592 0.7543 0.80595 0.89339 0.6636 0.82372 0.82576 0.73549 0.73793 0.80389 0.83039 0.60533 0.51569 0.82592 0.72812 0.65939 0.29817 0.54828 0.55088 0.69277 0.59723 0.54114 0.81800 0.79265 0.77110 0.8173 0.74067 0.87399 0.80665 0.79722 0.67866 0.75426 0.18026 0.11757 0.49104 0.31698 0.42572 0.07648 0.70272 0.66472 0.65806 0.69063 0.45658 2 0.73058 0.78811 -0.05707534 7 0.79372 0.64412 0.149597 0.59931 0.073111 insignificant 1 1 insignificant 0.53968 0.098577 insignificant 1 1 insignificant 0.0051472 0.90089 insignificant 1 insignificant 0.73039 0.25440 0.482997 7 0.76793 0.27541 0.492526 1.3484e-28 1.00000 hypermethylated 6.7421e-26 1 hypermethylated 4.6828e-12 1.00000 hypermethylated 4.6828e-09 1 hypermethylated 0.397411 0.0051005 weaklyHypermeth 0.56672 insignificant 0.73003 0.64555 0.0769122 7 0.73478 0.64299 0.091791 0.031449 0.990282 weaklyHypermeth 1 1 insignificant 0.17551 0.85770 insignificant 1 1 insignificant 0.077721 0.41255 insignificant 1 insignificant 0.78898 0.25440 0.539926 7 0.72464 0.27541 0.4492298 5.1343e-29 0.99993 hypermethylated 5.1343e-26 1 hypermethylated 7.1669e-10 1.0000 hypermethylated 7.1669e-07 1 hypermethylated 0.39226 0.005636 weaklyHypermeth 0.51236 insignificant 0.79181 0.64555 0.135198 7 0.79641 0.64299 0.15342 0.00021758 1.00000 weaklyHypermeth 0.049481 1 weaklyHypermeth 0.014472 0.99954 weaklyHypermeth 1 1 insignificant 0.072574 0.439351 insignificant 1 insignificant 0.25369 0.64555 -0.4151745 7 0.25761 0.64299 -0.38538 1.00000 1.1423e-09 hypomethylated 1 5.7115e-07 hypomethylated 1.00000 6.9637e-05 hypomethylated 1 0.023212 hypomethylated -0.3196903 0.026673 weaklyHypometh 1 insignificant chr5 50743154 50744154 55091 ISL1 ENSG00000016082 0.809495 133 5 0.854430 170 5 0.782391 122 5 0.836336 162 5 0.971678 79 5 0.852872 227 5 0.838233 97 5 0.836063 250 5 0.801173 146 5 0.833990 121 5 0.764484 202 5 0.5362637 60 5 0.912156 216 5 0.6642491 108 5 0.679673 233 5 0.7301587 46 5 0.7000000 29 5 0.5063132 170 5 0.89659 60 5 0.837673 143 5 0.812500 31 4 0.3312602 147 5 0.770000 52 5 0.908400 94 5 0.841667 34 4 0.9208309 302 5 0.787727 51 5 0.942857 29 5 0.860622 173 5 0.8852288 328 5 0.913150 317 5 0.88922 191 5 0.118056 112 6 0.075000 46 5 0.000000 25 1 0.000000 23 3 0.024726 161 5 0.457282 229 5 0.37506 221 5 0.448718 75 5 0.430127 105 5 0.242512 95 5 0.39905 113 5 0.8085091 0.819625 0.7383214 0.8343697 0.9638455 0.852142 0.8326096 0.8350164 0.8004566 0.8325172 0.9155214 0.5324106 0.8928758 0.6604674 0.7113577 0.874925 0.6270042 0.5020760 0.894527 0.835540 0.972310 0.3275813 0.765665 0.905512 0.8446730 0.9030622 0.78600 0.9439421 0.8343325 0.8824006 0.8944518 0.889209 0.0654008 0.0735759 NA 0.000000 0.030296 0.3480301 0.3688817 0.4429105 0.4239587 0.2386107 0.393580 5 0.7977650 0.837050 -0.03925974 5 0.79654 0.823453 -0.0269161 0.96427 0.2020730 insignificant 1 1 insignificant 0.998101 0.020868 weaklyHypometh 1 1 insignificant -0.0397437 0.472244 lowCoverage 1 lowCoverage 0.7977650 0.162752 0.6356421 5 0.796537 0.213023 0.5835138 4.8011e-36 1.00000 hypermethylated 2.4005e-33 1 hypermethylated 8.0754e-12 1.00000 hypermethylated 4.0377e-09 1 hypermethylated 0.6697005 0.00008260 lowCoverage 0.027533 lowCoverage 0.7978261 0.380952 0.4179132 5 0.79870 0.379334 0.419367 1.9159e-26 1.0000000 hypermethylated 9.5795e-24 1 hypermethylated 4.1610e-12 1.0000000 hypermethylated 2.0805e-09 1 hypermethylated 0.4031181 1.0485e-05 hypermethylated 0.0052423 hypermethylated 0.837050 0.16275 0.6791062 5 0.823453 0.213023 0.6104299 2.0296e-23 1.00000 hypermethylated 5.0741e-21 1 hypermethylated 3.8858e-10 1.00000 hypermethylated 1.9429e-07 1 hypermethylated 0.7094442 1.2009e-05 lowCoverage 0.0040029 lowCoverage 0.837249 0.3809524 0.4585011 5 0.838144 0.379334 0.4588097 3.8944e-17 1.00000000 hypermethylated 1.9472e-14 1.00000 hypermethylated 2.5259e-08 1.0000000 hypermethylated 1.2630e-05 1 hypermethylated 0.4428618 3.0019e-06 lowCoverage 0.0015009 lowCoverage 0.158703 0.3809524 -0.2221448 5 0.175628 0.379334 -0.203706 0.994689 4.0970e-07 hypomethylated 1 6.8284e-05 hypomethylated 1.00000 4.1954e-05 hypomethylated 1 0.011015 hypomethylated -0.2665824 0.01193125 lowCoverage 1.000000 lowCoverage chr5 50743427 50744427 55092 ISL1 ENSG00000016082 0.809495 133 5 0.854430 170 5 0.782391 122 5 0.836336 162 5 0.971678 79 5 0.852872 227 5 0.838233 97 5 0.836063 250 5 0.801173 146 5 0.833990 121 5 0.764484 202 5 0.5362637 60 5 0.912156 216 5 0.6642491 108 5 0.679673 233 5 0.7301587 46 5 0.7000000 29 5 0.5063132 170 5 0.89659 60 5 0.837673 143 5 0.812500 31 4 0.3312602 147 5 0.770000 52 5 0.908400 94 5 0.841667 34 4 0.9208309 302 5 0.787727 51 5 0.942857 29 5 0.860622 173 5 0.8852288 328 5 0.913150 317 5 0.88922 191 5 0.118056 112 6 0.075000 46 5 0.000000 25 1 0.000000 23 3 0.024726 161 5 0.457282 229 5 0.37506 221 5 0.448718 75 5 0.430127 105 5 0.242512 95 5 0.39905 113 5 0.8085091 0.819625 0.7383214 0.8343697 0.9638455 0.852142 0.8326096 0.8350164 0.8004566 0.8325172 0.9155214 0.5324106 0.8928758 0.6604674 0.7113577 0.874925 0.6270042 0.5020760 0.894527 0.835540 0.972310 0.3275813 0.765665 0.905512 0.8446730 0.9030622 0.78600 0.9439421 0.8343325 0.8824006 0.8944518 0.889209 0.0654008 0.0735759 NA 0.000000 0.030296 0.3480301 0.3688817 0.4429105 0.4239587 0.2386107 0.393580 5 0.7977650 0.837050 -0.03925974 5 0.79654 0.823453 -0.0269161 0.96427 0.2020730 insignificant 1 1 insignificant 0.998101 0.020868 weaklyHypometh 1 1 insignificant -0.0397437 0.472244 lowCoverage 1 lowCoverage 0.7977650 0.162752 0.6356421 5 0.796537 0.213023 0.5835138 4.8011e-36 1.00000 hypermethylated 2.4005e-33 1 hypermethylated 8.0754e-12 1.00000 hypermethylated 4.0377e-09 1 hypermethylated 0.6697005 0.00008260 lowCoverage 0.027533 lowCoverage 0.7978261 0.380952 0.4179132 5 0.79870 0.379334 0.419367 1.9159e-26 1.0000000 hypermethylated 9.5795e-24 1 hypermethylated 4.1610e-12 1.0000000 hypermethylated 2.0805e-09 1 hypermethylated 0.4031181 1.0485e-05 hypermethylated 0.0052423 hypermethylated 0.837050 0.16275 0.6791062 5 0.823453 0.213023 0.6104299 2.0296e-23 1.00000 hypermethylated 5.0741e-21 1 hypermethylated 3.8858e-10 1.00000 hypermethylated 1.9429e-07 1 hypermethylated 0.7094442 1.2009e-05 lowCoverage 0.0040029 lowCoverage 0.837249 0.3809524 0.4585011 5 0.838144 0.379334 0.4588097 3.8944e-17 1.00000000 hypermethylated 1.9472e-14 1.00000 hypermethylated 2.5259e-08 1.0000000 hypermethylated 1.2630e-05 1 hypermethylated 0.4428618 3.0019e-06 lowCoverage 0.0015009 lowCoverage 0.158703 0.3809524 -0.2221448 5 0.175628 0.379334 -0.203706 0.994689 4.0970e-07 hypomethylated 1 6.8284e-05 hypomethylated 1.00000 4.1954e-05 hypomethylated 1 0.011015 hypomethylated -0.2665824 0.01193125 lowCoverage 1.000000 lowCoverage chr5 53191302 53192302 55396 ENSG00000217791 0.895514 174 5 0.647280 176 6 0.827086 144 6 0.977540 142 3 0.936054 113 6 0.945730 208 5 0.854350 140 6 0.878042 164 5 0.890703 95 5 0.936520 103 6 0.849371 243 6 0.8685185 57 5 0.966009 123 6 0.8424908 39 3 0.923260 168 6 0.9889252 93 4 0.8457143 46 4 0.8986610 140 5 0.94911 157 5 0.903936 187 6 0.629252 57 5 0.9248848 83 4 0.881250 103 4 0.743271 101 5 0.810303 77 3 0.9290467 170 5 0.831061 80 4 0.925130 78 5 0.759692 125 6 0.9276855 169 5 0.812022 173 5 0.92914 179 5 0.829780 122 6 0.575253 114 6 0.707031 130 3 0.788889 23 2 0.775617 123 6 0.859891 157 5 0.86840 165 4 0.979913 122 5 0.927266 132 4 0.849689 97 3 0.83655 84 3 0.8347405 0.825309 0.8043151 0.9562730 0.8788027 0.912613 0.8049042 0.8299577 0.8338246 0.9076805 0.8073226 0.7863492 0.9700000 0.8732133 0.9250757 0.994087 0.7583488 0.8646398 0.942379 0.888626 0.826395 0.9160500 0.961048 0.960497 0.8161530 0.9213424 0.83592 0.8773653 0.8826993 0.9026449 0.9244233 0.896100 0.7702992 0.5867504 0.697001 0.783492 0.745924 0.8399580 0.8787280 0.9598407 0.8571367 0.8324614 0.911748 3 0.8845444 0.905172 -0.02526990 5 0.85622 0.821771 0.0344532 0.88219 0.2253887 insignificant 1 1 insignificant 0.530668 0.640006 insignificant 1 1 insignificant 0.0493460 0.144143 lowCoverage 1 lowCoverage 0.8844592 0.804185 0.0887432 5 0.856224 0.740514 0.1157105 5.0824e-05 0.95568 weaklyHypermeth 2.9896e-03 1 weaklyHypermeth 5.4183e-03 0.99775 weaklyHypermeth 3.1873e-01 1 insignificant 0.1351640 0.02130433 lowCoverage 1.000000 lowCoverage 0.8844165 0.889816 -0.0142411 4 0.83569 0.934812 -0.099127 9.8374e-01 0.1129462 lowCoverage 1.0000e+00 1 lowCoverage 9.9237e-01 0.0914113 lowCoverage 1.0000e+00 1 lowCoverage -0.0011245 9.7255e-01 lowCoverage 1.0000000 lowCoverage 0.905755 0.80602 0.1119326 5 0.867738 0.774873 0.0928655 4.3824e-05 0.96462 weaklyHypermeth 3.1303e-03 1 weaklyHypermeth 8.0191e-03 0.94294 weaklyHypermeth 4.7171e-01 1 insignificant 0.0858180 1.2030e-01 lowCoverage 1.0000000 lowCoverage 0.903805 0.8883333 0.0122559 4 0.759271 0.817960 -0.0586893 8.3719e-01 0.29629162 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.4574e-01 0.1344242 lowCoverage 1.0000e+00 1 lowCoverage -0.0504706 2.1529e-01 lowCoverage 1.0000000 lowCoverage 0.806015 0.8898164 -0.1198091 4 0.774873 0.934812 -0.159939 0.999866 1.5634e-03 lowCoverage 1 1.1368e-01 lowCoverage 0.99999 2.6973e-03 lowCoverage 1 0.264868 lowCoverage -0.1362886 0.02494032 lowCoverage 1.000000 lowCoverage chr5 53308757 53309757 55431 MIR581 ENSG00000207627 0.780960 316 7 0.692252 648 7 0.729512 823 7 0.773170 130 7 0.759176 1217 6 0.781677 217 7 0.818562 728 7 0.782607 539 6 0.852926 612 7 0.874133 603 6 0.869766 797 7 0.8043040 925 7 0.814335 553 7 NA 0 0 0.857411 743 7 0.8900840 971 3 0.7591067 849 7 0.8048186 187 7 0.86549 947 7 0.806856 226 7 0.801191 223 3 0.7278912 66 7 0.842861 275 7 0.935868 200 3 0.959184 39 6 0.8078061 441 7 0.730069 113 3 0.936155 142 3 0.678686 360 7 0.8781140 374 7 0.794823 387 7 0.81860 291 7 0.821063 374 7 0.793455 620 7 0.840321 452 7 0.886224 102 7 0.782143 304 6 0.736033 246 7 0.86480 231 7 0.836839 221 7 0.822893 187 7 0.787392 287 7 0.82801 225 7 0.7412910 0.775208 0.7844070 0.7191303 0.8367142 0.749152 0.8231355 0.8195057 0.8402552 0.8716888 0.8573275 0.8153340 0.8310694 NA 0.8518562 0.866511 0.7841165 0.7962947 0.870794 0.765244 0.829291 0.6713863 0.813884 0.877807 0.9222316 0.8516723 0.75156 0.8783542 0.7636461 0.8583001 0.8284012 0.783101 0.8010073 0.7574136 0.826381 0.827599 0.821227 0.7453144 0.8482495 0.8281196 0.7837257 0.7432147 0.801926 3 0.8344277 0.829955 0.00289245 7 0.81785 0.826769 -0.0089159 0.40579 0.1014303 insignificant 1 1 insignificant 0.792377 0.021029 inconclusive 1 1 insignificant -0.0197722 0.497190 insignificant 1 insignificant 0.8344277 0.788847 0.0418506 7 0.817853 0.817623 0.0002307 1.4710e-02 0.47608 weaklyHypermeth 6.3958e-01 1 insignificant 8.7543e-02 0.87611 insignificant 1.0000e+00 1 insignificant -0.0037078 0.88251285 insignificant 1.000000 insignificant 0.8344277 0.833189 0.0065804 7 0.81785 0.828727 -0.010873 9.4201e-04 0.0039799 weaklyHypermeth 7.2462e-02 1 weaklyHypermeth 4.2351e-01 0.0161661 inconclusive 1.0000e+00 1 insignificant -0.0218204 2.3251e-01 insignificant 1.0000000 insignificant 0.829955 0.78885 0.0365877 7 0.826769 0.817623 0.0091466 2.9062e-02 0.58868 weaklyHypermeth 1.0000e+00 1 insignificant 5.2131e-02 0.90021 insignificant 1.0000e+00 1 insignificant 0.0160644 6.3619e-01 insignificant 1.0000000 insignificant 0.829955 0.8331885 0.0179930 7 0.826769 0.828727 -0.0019576 9.6572e-02 0.19768786 insignificant 1.0000e+00 1.00000 insignificant 1.5236e-01 0.7478987 insignificant 1.0000e+00 1 insignificant -0.0020482 9.4388e-01 insignificant 1.0000000 insignificant 0.788847 0.8331885 -0.0095466 7 0.817623 0.828727 -0.011104 0.081127 2.4151e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.60411 7.5708e-02 insignificant 1 1.000000 insignificant -0.0181126 0.48144315 insignificant 1.000000 insignificant chr5 56643493 56644493 55615 GPBP1 ENSG00000062194 0.928913 311 6 0.834656 77 6 0.758207 91 6 0.983297 128 6 0.848581 56 6 0.935416 220 6 0.964376 114 6 0.934524 64 6 0.910642 92 6 0.900722 71 6 0.941157 154 6 0.8852814 52 6 0.889153 76 6 NA 0 0 0.924478 119 6 0.8834499 73 6 0.8883791 96 6 0.9308361 122 6 0.94286 87 6 0.937972 202 6 0.679563 66 3 0.7428788 89 6 0.917321 158 6 0.893803 67 6 0.972222 37 6 0.8920588 121 6 0.928383 78 6 0.955840 88 6 0.918803 53 6 0.9430866 130 6 0.884524 142 6 0.90203 269 6 0.796984 115 6 0.825819 119 6 0.760087 113 6 0.879630 46 6 0.757756 92 6 0.944775 117 6 0.94346 272 6 0.980110 238 6 0.959009 199 6 0.945468 283 6 0.95589 205 6 0.9256118 0.829348 0.7325974 0.9865987 0.8375156 0.933023 0.9673097 0.9394673 0.9166025 0.9029854 0.9402478 0.8701849 0.8776029 NA 0.9227969 0.867103 0.8970232 0.9350313 0.940577 0.937706 0.719063 0.7607537 0.920046 0.879270 0.9682203 0.8946529 0.92829 0.9473780 0.9144394 0.9361485 0.8786599 0.893773 0.7796207 0.8209476 0.787959 0.890066 0.771398 0.9402534 0.9420331 0.9836071 0.9556799 0.9454629 0.953124 6 0.9183673 0.899076 0.01521325 6 0.91634 0.900423 0.0159221 0.10402 0.9174810 insignificant 1 1 insignificant 0.444861 0.722577 insignificant 1 1 insignificant 0.0205925 0.468268 insignificant 1 insignificant 0.9183673 0.823920 0.0952168 6 0.916345 0.812997 0.1033475 2.3694e-05 0.74577 weaklyHypermeth 1.4809e-03 1 weaklyHypermeth 1.2304e-02 0.80160 weaklyHypermeth 6.4756e-01 1 insignificant 0.0789600 0.04554643 weaklyHypermeth 1.000000 insignificant 0.9183673 0.956558 -0.0377812 6 0.91634 0.956295 -0.039950 9.9975e-01 0.0085629 weaklyHypometh 1.0000e+00 1 insignificant 9.9994e-01 0.0025167 weaklyHypometh 1.0000e+00 1 insignificant -0.0503196 1.2211e-03 weaklyHypometh 0.3004705 insignificant 0.899076 0.82392 0.0788576 6 0.900423 0.812997 0.0874254 1.0281e-02 0.70770 weaklyHypermeth 4.6732e-01 1 insignificant 1.6691e-01 0.73741 insignificant 1.0000e+00 1 insignificant 0.0583675 1.6076e-01 insignificant 1.0000000 insignificant 0.899076 0.9565581 -0.0559256 6 0.900423 0.956295 -0.0558718 9.9981e-01 0.00173504 weaklyHypometh 1.0000e+00 0.43376 insignificant 9.9953e-01 0.0075203 weaklyHypometh 1.0000e+00 1 insignificant -0.0709121 1.7545e-02 weaklyHypometh 1.0000000 insignificant 0.823920 0.9565581 -0.1313858 6 0.812997 0.956295 -0.143297 0.995396 1.7052e-03 weaklyHypometh 1 1.1368e-01 insignificant 0.99945 2.9189e-03 weaklyHypometh 1 0.264868 insignificant -0.1292796 0.00678886 weaklyHypometh 1.000000 insignificant chr5 56643644 56644644 55616 GPBP1 ENSG00000062194 0.928913 311 6 0.834656 77 6 0.758207 91 6 0.983297 128 6 0.848581 56 6 0.935416 220 6 0.964376 114 6 0.934524 64 6 0.910642 92 6 0.900722 71 6 0.941157 154 6 0.8852814 52 6 0.889153 76 6 NA 0 0 0.924478 119 6 0.8834499 73 6 0.8883791 96 6 0.9308361 122 6 0.94286 87 6 0.937972 202 6 0.679563 66 3 0.7428788 89 6 0.917321 158 6 0.893803 67 6 0.972222 37 6 0.8920588 121 6 0.928383 78 6 0.955840 88 6 0.918803 53 6 0.9430866 130 6 0.884524 142 6 0.90203 269 6 0.796984 115 6 0.825819 119 6 0.760087 113 6 0.879630 46 6 0.757756 92 6 0.944775 117 6 0.94346 272 6 0.980110 238 6 0.959009 199 6 0.945468 283 6 0.95589 205 6 0.9256118 0.829348 0.7325974 0.9865987 0.8375156 0.933023 0.9673097 0.9394673 0.9166025 0.9029854 0.9402478 0.8701849 0.8776029 NA 0.9227969 0.867103 0.8970232 0.9350313 0.940577 0.937706 0.719063 0.7607537 0.920046 0.879270 0.9682203 0.8946529 0.92829 0.9473780 0.9144394 0.9361485 0.8786599 0.893773 0.7796207 0.8209476 0.787959 0.890066 0.771398 0.9402534 0.9420331 0.9836071 0.9556799 0.9454629 0.953124 6 0.9183673 0.899076 0.01521325 6 0.91634 0.900423 0.0159221 0.10402 0.9174810 insignificant 1 1 insignificant 0.444861 0.722577 insignificant 1 1 insignificant 0.0205925 0.468268 insignificant 1 insignificant 0.9183673 0.823920 0.0952168 6 0.916345 0.812997 0.1033475 2.3694e-05 0.74577 weaklyHypermeth 1.4809e-03 1 weaklyHypermeth 1.2304e-02 0.80160 weaklyHypermeth 6.4756e-01 1 insignificant 0.0789600 0.04554643 weaklyHypermeth 1.000000 insignificant 0.9183673 0.956558 -0.0377812 6 0.91634 0.956295 -0.039950 9.9975e-01 0.0085629 weaklyHypometh 1.0000e+00 1 insignificant 9.9994e-01 0.0025167 weaklyHypometh 1.0000e+00 1 insignificant -0.0503196 1.2211e-03 weaklyHypometh 0.3004705 insignificant 0.899076 0.82392 0.0788576 6 0.900423 0.812997 0.0874254 1.0281e-02 0.70770 weaklyHypermeth 4.6732e-01 1 insignificant 1.6691e-01 0.73741 insignificant 1.0000e+00 1 insignificant 0.0583675 1.6076e-01 insignificant 1.0000000 insignificant 0.899076 0.9565581 -0.0559256 6 0.900423 0.956295 -0.0558718 9.9981e-01 0.00173504 weaklyHypometh 1.0000e+00 0.43376 insignificant 9.9953e-01 0.0075203 weaklyHypometh 1.0000e+00 1 insignificant -0.0709121 1.7545e-02 weaklyHypometh 1.0000000 insignificant 0.823920 0.9565581 -0.1313858 6 0.812997 0.956295 -0.143297 0.995396 1.7052e-03 weaklyHypometh 1 1.1368e-01 insignificant 0.99945 2.9189e-03 weaklyHypometh 1 0.264868 insignificant -0.1292796 0.00678886 weaklyHypometh 1.000000 insignificant chr5 59210730 59211730 55718 PDE4D ENSG00000113448 0.922222 43 5 0.787464 82 5 0.720000 22 4 0.833824 82 5 0.847222 27 2 0.718977 135 5 0.516667 37 4 0.806373 87 5 0.707143 30 4 0.966667 27 4 0.833480 140 5 NA 0 0 0.843333 39 5 0.8541667 41 5 0.783333 19 0 NA 0 0 0.6666667 152 1 0.9625000 72 5 0.72381 45 5 0.843359 141 5 0.950000 16 0 1.0000000 11 0 0.950000 33 1 1.000000 18 1 0.750000 20 4 0.7414221 123 5 0.900000 24 1 0.750000 9 1 0.896970 58 5 0.7424242 84 5 0.788767 82 5 0.84184 152 5 0.720606 62 5 0.733586 60 5 0.819853 75 5 0.900000 20 4 0.679798 51 5 0.832656 106 5 0.78667 45 5 0.993750 52 5 0.960000 30 2 0.758333 35 4 0.82517 62 5 0.9166667 0.841629 0.6647059 0.8003893 0.8382353 0.690108 0.5522876 0.8054594 0.7177871 0.9705882 0.7598408 NA 0.8357843 0.8455882 0.8308824 NA 0.6234118 0.9430147 0.715686 0.826682 0.926471 1.0000000 0.955882 1.000000 0.7705882 0.6888681 0.86765 0.7499076 0.9346405 0.7500000 0.7745637 0.820216 0.7045455 0.8400178 0.819853 0.870588 0.660665 0.8207296 0.7313725 1.0000000 0.9352941 0.8051471 0.762879 0 0.8386568 0.828571 0.00792037 5 0.84572 0.841456 0.0042588 0.69759 0.6534471 insignificant 1 1 insignificant 0.999738 0.047037 inconclusive 1 1 insignificant -0.0627737 0.123565 lowCoverage 1 lowCoverage 0.8386568 0.810160 0.0148536 5 0.845715 0.670549 0.1751660 6.2743e-01 0.91769 insignificant 1.0000e+00 1 insignificant 3.2766e-01 0.93793 insignificant 1.0000e+00 1 insignificant 0.0154284 0.72439439 lowCoverage 1.000000 lowCoverage 0.8386568 0.875000 -0.0295571 5 0.84572 0.872979 -0.027264 9.6305e-01 0.4875573 insignificant 1.0000e+00 1 insignificant 9.8798e-01 0.3368292 insignificant 1.0000e+00 1 insignificant -0.0682722 2.4818e-01 lowCoverage 1.0000000 lowCoverage 0.828571 0.81016 0.0087886 5 0.841456 0.670549 0.1709072 5.0818e-01 0.78014 insignificant 1.0000e+00 1 insignificant 1.9517e-02 0.99613 weaklyHypermeth 1.0000e+00 1 insignificant 0.0782021 1.0735e-01 lowCoverage 1.0000000 lowCoverage 0.828571 0.8750000 -0.0378088 5 0.841456 0.872979 -0.0315228 8.9044e-01 0.27958277 insignificant 1.0000e+00 1.00000 insignificant 6.8762e-01 0.8941904 insignificant 1.0000e+00 1 insignificant -0.0054985 9.2413e-01 lowCoverage 1.0000000 lowCoverage 0.810160 0.8750000 -0.0476444 5 0.670549 0.872979 -0.202430 0.988772 4.0026e-01 insignificant 1 1.0000e+00 insignificant 0.99659 3.3467e-01 insignificant 1 1.000000 insignificant -0.0837006 0.19024605 lowCoverage 1.000000 lowCoverage chr5 60665196 60666196 55784 C5orf43 ENSG00000188725 0.020465 1431 28 0.091388 958 28 0.020179 1048 28 0.006004 1190 28 0.050753 792 28 0.056634 1902 29 0.049649 1074 28 0.019340 1031 29 0.020017 1478 28 0.038475 1771 28 0.009306 961 28 0.0049525 1331 28 0.018944 941 28 0.0019962 902 22 0.060413 1668 28 0.0097787 820 28 0.0035764 358 22 0.0013235 1817 28 0.08543 688 28 0.067349 1330 29 0.051587 248 25 0.0045716 754 22 0.052241 721 28 0.053839 538 29 0.096726 487 28 0.0055488 1398 28 0.009476 1261 29 0.042387 721 29 0.023726 987 28 0.0035886 1385 28 0.038946 1234 28 0.05139 1140 28 0.020330 708 29 0.036433 742 28 0.044106 872 25 0.018258 280 22 0.053407 817 29 0.026247 1436 28 0.04362 2202 28 0.018466 1411 28 0.035982 1523 28 0.038719 1742 28 0.07552 1210 28 0.0035928 0.010052 0.0040288 0.0066932 0.0090232 0.023204 0.0069026 0.0092994 0.0051505 0.0055602 0.0093056 0.0056388 0.0019763 0.0037932 0.0052627 0.011399 0.0035982 0.0015953 0.016646 0.021180 0.024381 0.0050876 0.029090 0.021217 0.0040149 0.0051125 0.01202 0.0091449 0.0087116 0.0042062 0.0047622 0.016819 0.0070072 0.0040028 0.046355 0.015324 0.011511 0.0035588 0.0023834 0.0032268 0.0016731 0.0044207 0.010226 28 0.0095781 0.011135 -0.00037173 28 0.10038 0.054313 0.0460659 0.89384 0.9357960 insignificant 1 1 insignificant 0.959111 0.914891 insignificant 1 1 insignificant -0.0043702 0.675400 insignificant 1 insignificant 0.0094553 0.015870 -0.0052982 28 0.075858 0.069212 0.0066462 7.8802e-01 0.99591 insignificant 1.0000e+00 1 insignificant 8.3538e-01 0.99754 insignificant 1.0000e+00 1 insignificant -0.0013314 0.87827147 insignificant 1.000000 insignificant 0.0094589 0.003957 0.0042312 28 0.07988 0.042684 0.037197 1.8730e-01 0.9999380 insignificant 1.0000e+00 1 insignificant 5.3720e-01 0.9940334 insignificant 1.0000e+00 1 insignificant -0.0106629 3.7123e-01 insignificant 1.0000000 insignificant 0.010867 0.01586 -0.0046426 28 0.044529 0.065751 -0.0212220 9.6051e-01 0.99873 insignificant 1.0000e+00 1 insignificant 9.5917e-01 0.99988 insignificant 1.0000e+00 1 insignificant 0.0030387 7.6259e-01 insignificant 1.0000000 insignificant 0.010888 0.0040801 0.0048237 28 0.051684 0.070036 -0.0183517 5.8739e-01 0.99994851 insignificant 1.0000e+00 1.00000 insignificant 8.1343e-01 0.9992641 insignificant 1.0000e+00 1 insignificant -0.0062928 6.2014e-01 insignificant 1.0000000 insignificant 0.015283 0.0040806 0.0092275 28 0.045491 0.072096 -0.026604 0.994361 9.9993e-01 insignificant 1 1.0000e+00 insignificant 0.99968 9.9961e-01 insignificant 1 1.000000 insignificant -0.0093315 0.42102829 insignificant 1.000000 insignificant chr5 62506574 62507574 55992 ISCA1L ENSG00000217416 0.882048 297 7 0.768161 74 6 0.687991 89 7 0.872269 101 7 0.964286 25 0 0.888204 198 7 0.917416 105 7 0.750992 88 7 0.803061 62 6 0.856724 64 6 0.820013 139 7 0.8197279 65 7 0.772176 100 7 NA 0 0 0.903680 92 7 0.7074830 50 7 0.8681818 63 7 0.8313147 139 7 0.85528 84 7 0.847313 232 7 0.947449 32 3 0.9249382 60 7 0.870656 139 7 0.871628 47 3 0.928571 39 3 0.8560197 124 7 0.971133 57 3 0.812169 22 3 0.908163 55 4 0.8028514 146 7 0.925665 82 5 0.87547 274 7 0.667375 93 7 0.781108 94 7 0.851139 96 7 0.863946 41 6 0.724490 35 3 0.686412 107 7 0.88371 377 7 0.904022 238 7 0.899327 229 7 0.885937 284 7 0.89889 219 7 0.8848701 0.805263 0.7776051 0.9149338 0.9736842 0.882506 0.9145376 0.7931743 0.8591165 0.8670161 0.8580864 0.8742951 0.7916448 NA 0.9112341 0.823622 0.9217105 0.8501108 0.881018 0.838248 0.920865 0.9438511 0.912338 0.885213 0.9218750 0.8948363 0.94786 0.8391534 0.8970865 0.8449212 0.9103099 0.896079 0.6610240 0.8052266 0.876078 0.924969 0.705514 0.7600609 0.8646031 0.9108247 0.8990221 0.9028931 0.904918 3 0.8442187 0.884865 -0.03184660 7 0.83566 0.868153 -0.0324916 0.75983 0.0082358 weaklyHypometh 1 1 insignificant 0.968559 0.013851 weaklyHypometh 1 1 insignificant -0.0587880 0.013203 lowCoverage 1 lowCoverage 0.8442187 0.776824 0.0736753 7 0.835661 0.758941 0.0767197 2.0919e-04 0.99972 weaklyHypermeth 1.1622e-02 1 weaklyHypermeth 5.3619e-03 0.99960 weaklyHypermeth 3.1873e-01 1 insignificant 0.0700263 0.10353551 insignificant 1.000000 insignificant 0.8442187 0.891611 -0.0471515 7 0.83566 0.890808 -0.055147 8.8670e-01 0.0082944 weaklyHypometh 1.0000e+00 1 insignificant 9.1984e-01 0.0172996 weaklyHypometh 1.0000e+00 1 insignificant -0.0619408 1.5024e-03 weaklyHypometh 0.3004705 insignificant 0.884865 0.77682 0.1034658 7 0.868153 0.758941 0.1092113 3.2812e-06 1.00000 weaklyHypermeth 2.5240e-04 1 weaklyHypermeth 5.3756e-05 1.00000 weaklyHypermeth 7.6794e-03 1 weaklyHypermeth 0.1288143 1.0488e-02 lowCoverage 1.0000000 lowCoverage 0.884865 0.8916110 -0.0050528 7 0.868153 0.890808 -0.0226551 2.8599e-01 0.04322189 weaklyHypometh 1.0000e+00 1.00000 insignificant 3.4655e-01 0.6360884 insignificant 1.0000e+00 1 insignificant -0.0031528 8.4289e-01 lowCoverage 1.0000000 lowCoverage 0.776824 0.8916110 -0.1135287 7 0.758941 0.890808 -0.131866 0.999902 8.5690e-06 weaklyHypometh 1 1.2241e-03 weaklyHypometh 0.99962 1.5633e-04 weaklyHypometh 1 0.031267 weaklyHypometh -0.1319671 0.01139733 weaklyHypometh 1.000000 insignificant chr5 63408731 63409731 55998 HTR1A ENSG00000178394 0.753081 258 11 0.640410 259 10 0.581393 135 9 0.784395 196 8 0.664716 134 9 0.744776 383 10 0.712526 153 9 0.664000 143 9 0.636429 80 7 0.694794 67 7 0.648082 312 10 0.6075253 89 8 0.667928 109 7 0.7638889 27 3 0.772759 123 9 0.7026455 57 7 0.7913165 51 4 0.5783630 153 7 0.70167 166 9 0.759882 281 10 0.768007 75 8 0.5789835 67 6 0.672807 202 11 0.736200 114 8 0.528095 35 4 0.6580364 218 10 0.643603 127 8 0.731595 89 6 0.458163 101 6 0.6166230 214 10 0.709645 185 8 0.64468 325 10 0.445163 218 9 0.586576 132 10 0.433239 220 10 0.581512 42 3 0.482925 163 8 0.508430 228 10 0.73898 298 10 0.680258 278 11 0.816153 250 11 0.695501 239 7 0.76995 243 11 0.5972103 0.556172 0.5996711 0.6463113 0.5667509 0.665250 0.6898598 0.5246046 0.5429688 0.5327155 0.5216558 0.5134876 0.5075446 0.6162256 0.6338339 0.791284 0.7151473 0.4879012 0.570645 0.637950 0.576018 0.4466943 0.551567 0.624125 0.4420493 0.5508347 0.57471 0.6556866 0.4394274 0.5013411 0.5304613 0.524692 0.4622648 0.5531742 0.321709 0.557632 0.523517 0.5431498 0.6754068 0.5623364 0.6490499 0.6369341 0.606414 3 0.6611024 0.636312 0.03125811 10 0.70741 0.680204 0.0272057 0.07957 0.6601600 insignificant 1 1 insignificant 0.068043 0.938418 insignificant 1 1 insignificant 0.0479922 0.127095 insignificant 1 insignificant 0.6611024 0.488534 0.1606405 10 0.707409 0.521205 0.1862047 1.7403e-18 1.00000 weaklyHypermeth 2.9006e-16 1 weaklyHypermeth 1.2682e-05 0.99986 weaklyHypermeth 1.8118e-03 1 weaklyHypermeth 0.1872216 0.00025116 weaklyHypermeth 0.062790 weaklyHypermeth 0.6611024 0.766820 -0.0327293 10 0.70741 0.752677 -0.045268 9.9622e-01 0.0448717 weaklyHypometh 1.0000e+00 1 insignificant 9.6797e-01 0.1771957 insignificant 1.0000e+00 1 insignificant -0.0466403 1.4891e-01 insignificant 1.0000000 insignificant 0.636312 0.48853 0.1324068 10 0.680204 0.521205 0.1589990 4.3307e-12 0.99994 weaklyHypermeth 6.1867e-10 1 weaklyHypermeth 2.9291e-03 0.99585 weaklyHypermeth 1.8307e-01 1 insignificant 0.1392294 2.4662e-03 weaklyHypermeth 0.4110402 insignificant 0.636312 0.7668196 -0.0688423 10 0.680204 0.752677 -0.0724732 9.9982e-01 0.00081425 weaklyHypometh 1.0000e+00 0.40713 insignificant 9.9617e-01 0.0188070 weaklyHypometh 1.0000e+00 1 insignificant -0.0946325 2.1509e-02 weaklyHypometh 1.0000000 insignificant 0.488534 0.7668196 -0.2388643 10 0.521205 0.752677 -0.231472 1.000000 2.3975e-11 hypomethylated 1 2.3975e-08 hypomethylated 0.99999 4.4058e-05 hypomethylated 1 0.011015 hypomethylated -0.2338619 0.00012617 hypomethylated 0.063083 hypomethylated chr5 64348603 64349603 56043 SDCCAG10 ENSG00000153015 0.65429 168 6 0.64066 162 6 0.58081 39 4 0.80097 173 5 0.75463 43 5 0.70210 114 6 0.46766 73 6 0.841241 76 6 0.72487 38 4 0.794444 25 4 0.73608 159 6 0.85000 18 3 0.673810 65 6 0.69318 47 4 0.85241 81 4 0.66667 12 0 NA 0 0 0.74331 221 6 0.75728 93 6 0.72455 91 6 0.72197 44 4 0.60000 5 0 0.74678 73 4 0.49184 35 5 0.76111 58 3 0.789123 126 6 0.617593 37 3 0.80000 11 0 0.76585 112 6 0.69668 108 6 0.708232 109 6 0.74397 94 5 0.47583 125 6 0.64118 98 6 0.60058 110 6 0.580000 16 2 0.57476 86 6 0.68829 142 6 0.832526 93 5 0.78563 162 5 0.74312 103 5 0.56250 76 3 0.68254 88 6 0.72873 0.66706 0.54026 0.80165 0.710714 0.70141 0.58311 0.884661 0.82540 0.744286 0.73952 0.78819 0.670000 0.66201 0.770056 0.78375 NA 0.81510 0.73248 0.68991 0.745776 0.396124 0.74421 0.57980 0.713981 0.84939 0.648175 0.66513 0.75098 0.69530 0.771009 0.71058 0.57709 0.55556 0.58460 0.593375 0.66588 0.67481 0.822357 0.79644 0.82333 0.72679 0.685714 0 0.73895 0.73153 0.0087246 6 0.67204 0.66096 0.0110759 0.75262 0.837370 insignificant 1 1 insignificant 0.67096 0.67750 insignificant 1 1 insignificant 0.0152962 0.65831 lowCoverage 1 lowCoverage 0.73982 0.61565 0.122049 6 0.76804 0.51901 0.249037 2.9355e-06 9.9999e-01 weaklyHypermeth 0.00032617 1.0000e+00 weaklyHypermeth 0.00039219 9.9830e-01 weaklyHypermeth 0.043577 1.0000e+00 weaklyHypermeth 0.125454 0.0054666 lowCoverage 0.49696 lowCoverage 0.73967 0.78927 -0.0401340 5 0.72939 0.75425 -0.0248607 0.94366 0.20049997 insignificant 1 1.00000 insignificant 0.928658 0.210975 insignificant 1 1 insignificant -0.0023706 0.96490 lowCoverage 1 lowCoverage 0.73210 0.61672 0.112786 6 0.71462 0.60551 0.1091090 1.1334e-05 9.9658e-01 weaklyHypermeth 0.0014168 1.0000e+00 weaklyHypermeth 0.0008575 9.5874e-01 weaklyHypermeth 0.095279 1.0000e+00 weaklyHypermeth 0.110158 0.01532597 lowCoverage 1.00000 lowCoverage 0.73210 0.78927 -0.0487593 5 0.71462 0.75425 -0.0396286 0.961575 0.13663 insignificant 1 1 insignificant 0.89099 0.22871 insignificant 1 1 insignificant -0.0176668 0.75177 lowCoverage 1 lowCoverage 0.61672 0.78927 -0.168290 5 0.60551 0.75425 -0.1487376 9.9968e-01 2.1498e-05 weaklyHypometh 1.0000e+00 0.0035829 weaklyHypometh 9.9797e-01 0.00084332 weaklyHypometh 1.000000 0.174 insignificant -0.127824 0.05408829 lowCoverage 1.00000 lowCoverage chr5 67352266 67353266 56295 ENSG00000223149 0.73208 405 16 0.79029 508 18 0.81082 470 17 0.81454 170 11 0.79614 87 9 0.70845 269 16 0.71170 140 10 0.803784 182 12 0.79737 101 10 0.910409 124 9 0.87676 244 12 0.75553 135 10 0.843939 200 12 NA 0 0 0.87643 175 10 0.72214 119 6 0.81607 82 7 0.83429 131 12 0.91153 237 12 0.75569 287 18 0.77167 44 3 0.70737 52 2 0.81861 243 16 0.62359 66 9 0.85667 43 5 0.868821 387 18 0.693009 106 10 0.70833 28 0 0.85187 173 12 0.89886 424 18 0.829790 540 18 0.75145 422 18 0.76782 336 16 0.76692 206 12 0.82167 291 18 0.645172 66 7 0.65946 116 10 0.74783 429 18 0.762895 417 14 0.82128 356 18 0.70778 218 16 0.77074 263 14 0.76989 266 16 0.75430 0.78286 0.78215 0.89216 0.747892 0.72000 0.71362 0.777938 0.75393 0.878499 0.83682 0.72030 0.811956 NA 0.846224 0.73955 0.76116 0.81573 0.91625 0.73685 0.780878 0.646377 0.81196 0.66321 0.836310 0.89081 0.735279 0.65960 0.85056 0.90867 0.827903 0.74548 0.70928 0.75463 0.75559 0.712390 0.66910 0.65861 0.785049 0.81317 0.79325 0.81394 0.788395 2 0.78111 0.80775 -0.0281386 18 0.78957 0.81726 -0.0276980 0.98186 0.030631 weaklyHypometh 1 1 insignificant 0.88325 0.11771 insignificant 1 1 insignificant 0.0219078 0.45265 insignificant 1 insignificant 0.78111 0.75277 0.033721 18 0.78957 0.76602 0.023549 1.5584e-03 1.6353e-01 weaklyHypermeth 0.08201995 1.0000e+00 weaklyHypermeth 0.04028259 3.1762e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.068765 0.0612446 insignificant 1.00000 insignificant 0.78111 0.75724 0.0038671 15 0.78957 0.77959 0.0099789 0.51511 0.00035853 inconclusive 1 0.17926 insignificant 0.658774 0.066185 insignificant 1 1 insignificant 0.0370605 0.13951 insignificant 1 insignificant 0.80775 0.75277 0.046949 18 0.81726 0.76602 0.0512466 1.1181e-02 9.5831e-01 weaklyHypermeth 0.5082246 1.0000e+00 insignificant 0.0870783 8.8779e-01 insignificant 1.000000 1.0000e+00 insignificant 0.046857 0.23256813 insignificant 1.00000 insignificant 0.80775 0.75724 0.0350272 15 0.81726 0.77959 0.0376768 0.142001 0.15868 insignificant 1 1 insignificant 0.33720 0.29113 insignificant 1 1 insignificant 0.0151527 0.62728 insignificant 1 insignificant 0.75277 0.75724 -0.018627 15 0.76602 0.77959 -0.0135697 3.3252e-01 3.6289e-03 weaklyHypometh 1.0000e+00 0.2592042 insignificant 7.1869e-01 0.03442501 weaklyHypometh 1.000000 1.000 insignificant -0.031704 0.36830108 insignificant 1.00000 insignificant chr5 77325238 77326238 56767 ENSG00000213763 0.15000 39 4 0.17632 59 5 0.15434 67 5 0.11111 20 2 0.08323 57 5 0.20711 59 4 0.17662 93 5 0.033333 51 5 0.10404 69 5 0.030682 51 4 0.18580 101 5 0.24313 53 4 0.066427 78 5 0.12500 5 0 0.07397 95 5 0.12475 50 3 0.15111 57 4 0.24000 15 1 0.20595 41 3 0.15527 71 5 0.05000 23 2 0.10000 18 2 0.37485 29 2 0.19167 36 4 0.00000 7 0 0.091147 90 5 0.070476 37 3 0.15000 12 1 0.28690 53 4 0.12073 103 5 0.071734 99 5 0.26475 85 5 0.87500 53 4 0.80000 26 3 1.00000 46 3 0.333333 5 0 0.94921 33 3 0.68016 80 4 0.050794 32 4 0.15333 34 4 0.33333 7 0 0.25000 8 0 0.00000 9 0 0.16204 0.19982 0.18499 0.19558 0.077065 0.24800 0.25301 0.030864 0.12159 0.028409 0.16631 0.22777 0.076939 0.18706 0.089067 0.16132 0.17695 0.27778 0.22036 0.15924 0.046296 0.092593 0.24860 0.23920 0.043632 0.12001 0.067725 0.11834 0.14837 0.16978 0.076655 0.29783 0.86111 0.85082 0.88889 0.347648 0.96414 0.60084 0.047031 0.17284 0.10847 0.19444 0.014403 0 0.14412 0.13682 0.0038650 5 0.13929 0.13219 0.0070999 0.26767 0.480476 insignificant 1 1 insignificant 0.11910 0.60017 insignificant 1 1 insignificant -0.0077782 0.82701 lowCoverage 1 lowCoverage 0.14412 0.80658 -0.660776 3 0.13929 0.81088 -0.671587 1.0000e+00 9.2962e-36 lowCoverage 1.00000000 4.6481e-33 lowCoverage 1.00000000 1.5487e-10 lowCoverage 1.000000 7.7433e-08 lowCoverage -0.633039 0.0012703 lowCoverage 0.14115 lowCoverage 0.14412 0.11111 0.0343721 1 0.13929 0.12537 0.0139142 0.15768 0.72927075 lowCoverage 1 1.00000 lowCoverage 0.038846 0.961143 lowCoverage 1 1 lowCoverage -0.0175819 0.79300 lowCoverage 1 lowCoverage 0.13682 0.80658 -0.687721 3 0.13219 0.81088 -0.6786872 1.0000e+00 1.7396e-26 lowCoverage 1.0000000 8.6982e-24 lowCoverage 1.0000000 8.3513e-08 lowCoverage 1.000000 4.1757e-05 lowCoverage -0.625261 0.00093033 lowCoverage 0.13290 lowCoverage 0.13682 0.11111 0.0434763 1 0.13219 0.12537 0.0068143 0.042539 0.58958 lowCoverage 1 1 lowCoverage 0.10669 0.91755 lowCoverage 1 1 lowCoverage -0.0098037 0.89204 lowCoverage 1 lowCoverage 0.80658 0.11111 0.668645 0 0.81088 0.12537 0.6855015 3.7158e-10 1.0000e+00 noCoverage 1.8579e-07 1.0000000 noCoverage 4.1427e-05 0.99999998 noCoverage 0.020713 1.000 noCoverage 0.615457 0.00072928 lowCoverage 0.14586 lowCoverage chr5 81098580 81099580 56911 SSBP2 ENSG00000145687 0.89516 129 5 0.86878 148 5 0.71149 107 3 0.96778 91 2 0.92639 69 3 0.93041 236 5 0.92583 103 3 0.910071 122 5 0.90023 98 3 0.948421 80 3 0.94713 206 5 0.96296 63 3 0.874181 119 3 0.96875 38 2 0.83811 71 3 0.85464 61 3 0.75000 22 2 0.81103 135 4 0.87747 72 4 0.88860 150 5 0.90182 37 4 0.84325 29 2 0.87093 87 5 0.90421 79 5 0.57500 14 1 0.801756 178 5 0.937895 59 4 0.86222 49 4 0.88083 88 4 0.93012 190 5 0.919416 134 4 0.93362 169 5 0.88283 156 5 0.91447 64 3 0.98621 71 5 0.071429 8 1 0.92338 130 5 0.85084 121 5 0.980618 112 2 0.92288 96 3 0.95757 78 2 0.77802 74 2 0.75960 81 2 0.84434 0.86004 0.85643 0.91896 0.921700 0.94841 0.86935 0.857600 0.85251 0.871560 0.94682 0.99813 0.900035 0.94123 0.874434 0.79333 0.99083 0.85623 0.93419 0.93177 0.950626 0.849470 0.80993 0.98197 0.933486 0.87038 0.851135 0.90520 0.92458 0.95449 0.901643 0.92224 0.90476 0.82814 0.96394 0.082962 0.90630 0.69769 0.952074 0.91827 0.91159 0.76929 0.892318 2 0.89670 0.89668 0.0014066 5 0.90817 0.88646 0.0217114 0.21818 0.626997 insignificant 1 1 insignificant 0.16433 0.43255 insignificant 1 1 insignificant 0.0244493 0.46392 lowCoverage 1 lowCoverage 0.89670 0.85091 0.046184 5 0.90817 0.89369 0.014483 2.2936e-01 7.0756e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.67777299 5.4195e-01 insignificant 1.000000 1.0000e+00 insignificant 0.116344 0.4492817 lowCoverage 1.00000 lowCoverage 0.89670 0.91837 -0.0092966 2 0.90817 0.89893 0.0092436 0.67382 0.44948198 lowCoverage 1 1.00000 lowCoverage 0.899190 0.249853 lowCoverage 1 1 lowCoverage 0.0081350 0.87430 lowCoverage 1 lowCoverage 0.89668 0.85091 0.047275 5 0.88646 0.89369 -0.0072283 4.3314e-01 3.2280e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.7324063 2.0061e-01 insignificant 1.000000 1.0000e+00 insignificant 0.091895 0.54970212 lowCoverage 1.00000 lowCoverage 0.89668 0.91837 -0.0097204 2 0.88646 0.89893 -0.0124678 0.703654 0.32770 lowCoverage 1 1 lowCoverage 0.92072 0.09967 lowCoverage 1 1 lowCoverage -0.0163143 0.77301 lowCoverage 1 lowCoverage 0.85091 0.91837 -0.070936 2 0.89369 0.89893 -0.0052395 7.2020e-01 1.8695e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.3600e-01 0.42958790 lowCoverage 1.000000 1.000 lowCoverage -0.108209 0.49380506 lowCoverage 1.00000 lowCoverage chr5 87476032 87477032 57360 ENSG00000211203 0.10526 423 10 0.055877 480 10 0.13366 193 10 0.053686 358 10 0.11396 120 8 0.26199 445 10 0.16529 198 10 0.23626 303 10 0.093339 273 10 0.055425 218 10 0.16887 381 10 0.15104 167 10 0.038948 286 10 0.084386 136 6 0.27100 164 10 0.093627 132 6 0.41667 15 1 0.10221 326 10 0.057747 332 10 0.057846 445 10 0.23768 105 6 0.10769 190 10 0.089868 248 10 0.041246 179 10 0.06839 147 10 0.093822 400 10 0.041342 286 10 0.064359 129 8 0.048687 283 10 0.031797 583 10 0.20489 274 10 0.1355 428 10 0.13079 265 10 0.19923 124 8 0 142 10 0.21676 90 8 0.067695 275 10 0.24664 218 10 0.12026 434 10 0.25176 434 10 0.061695 456 10 0.025515 359 10 0.18502 407 10 0.11302 0.075359 0.15932 0.04751 0.13548 0.18296 0.17438 0.18364 0.083741 0.076813 0.081314 0.10718 0.050438 0.092276 0.29041 0.097152 0.40298 0.099507 0.099429 0.059448 0.26807 0.04028 0.088024 0.052333 0.069542 0.099594 0.046188 0.10721 0.042867 0.042003 0.18287 0.14836 0.22236 0.09883 0 0.095858 0.081997 0.23198 0.15799 0.16209 0.067269 0.037773 0.099674 6 0.10751 0.084641 0.021930 10 0.13488 0.097097 0.037782 0.2596 0.98679 insignificant 1 1 insignificant 0.36805 0.98752 insignificant 1 1 insignificant 0.038748 0.18716 insignificant 1 insignificant 0.1076 0.13926 -0.033396 10 0.16120 0.14134 0.019857 0.8482 0.0056764 weaklyHypometh 1 1 insignificant 0.12519 0.66142 insignificant 1 1 insignificant -0.0076644 0.86743 insignificant 1 insignificant 0.10757 0.092912 0.0041957 10 0.14451 0.14511 -0.00059729 0.63357 0.43541 insignificant 1 1 insignificant 0.80609 0.60856 insignificant 1 1 insignificant 0.0070038 0.88425 insignificant 1 insignificant 0.084594 0.14004 -0.054974 10 0.093593 0.21290 -0.11930 0.9991 0.018850 weaklyHypometh 1 1 insignificant 0.80289 0.62465 insignificant 1 1 insignificant -0.046412 0.31805 insignificant 1 insignificant 0.084667 0.092823 -0.016755 10 0.091028 0.12697 -0.035943 0.99607 0.47962 insignificant 1 1 insignificant 0.99964 0.55581 insignificant 1 1 insignificant -0.031744 0.5091 insignificant 1 insignificant 0.14004 0.093001 0.043605 10 0.21290 0.16929 0.043601 0.26531 0.99928 insignificant 1 1 insignificant 0.96333 0.39016 insignificant 1 1 insignificant 0.014668 0.80128 insignificant 1 insignificant chr5 92959237 92960237 58341 NR2F1 ENSG00000175745 0.13212 272 8 0.19534 208 8 0.05396 202 8 0.059177 206 7 0.12277 185 8 0.17334 365 8 0.10015 209 8 0.085682 256 8 0.16485 412 8 0.12316 281 6 0.08360 234 8 0.10074 200 8 0.038648 295 8 0.045178 164 6 0.035587 280 8 0.083239 184 8 0.064824 111 8 0.10288 240 8 0.13344 149 8 0.026212 347 8 0.3258 75 7 0.035785 182 6 0.057249 264 8 0.16975 133 8 0.088271 128 5 0.15275 287 8 0.16378 174 7 0.025369 151 6 0.19435 124 8 0.03134 349 8 0.05616 270 8 0.18063 225 8 0.32431 229 8 0.15122 101 8 0.48250 64 4 0.15952 31 3 0.34746 172 6 0.30327 216 8 0.085645 293 8 0.076605 200 8 0.030794 226 6 0.14375 185 5 0.17641 243 6 0.032752 0.077611 0.038079 0.037067 0.064044 0.11505 0.083692 0.062498 0.044503 0.083642 0.063255 0.070146 0.034274 0.052886 0.039837 0.039240 0.036011 0.080574 0.018536 0.031441 0.16306 0.035015 0.057783 0.14491 0.062456 0.046515 0.099449 0.044465 0.093795 0.031592 0.031425 0.093567 0.15910 0.088586 0.33556 0.10410 0.27044 0.27353 0.041409 0.066766 0.026008 0.053883 0.093673 6 0.06250 0.06901 -0.0049150 8 0.13163 0.13916 -0.0075368 0.86638 0.46773 insignificant 1 1 insignificant 0.97895 0.33629 insignificant 1 1 insignificant -0.027192 0.35050 insignificant 1 insignificant 0.06250 0.22509 -0.161440 8 0.13163 0.23960 -0.107977 0.9993376 2.3113e-21 weaklyHypometh 1 2.3113e-18 weaklyHypometh 0.99957 5.1025e-08 weaklyHypometh 1 5.1025e-05 weaklyHypometh -0.198468 0.010601 weaklyHypometh 1 insignificant 0.062513 0.055798 0.0012077 8 0.14625 0.18887 -0.042621 0.14130 0.05156514 insignificant 1 1.00000 insignificant 0.23415 0.25070321 insignificant 1 1.00000 insignificant -0.0063949 8.2700e-01 insignificant 1.00000 insignificant 0.06901 0.22509 -0.153776 8 0.13916 0.23960 -0.100440 0.99916682 4.2388e-12 weaklyHypometh 1.00000 4.2388e-09 weaklyHypometh 0.99897 0.00011527 weaklyHypometh 1 0.057635 weaklyHypometh -0.171277 0.017974 weaklyHypometh 1 insignificant 0.069039 0.055798 0.0089141 8 0.15463 0.18887 -0.034247 0.28753 0.22755230 insignificant 1 1.00000 insignificant 0.28332 0.8273187 insignificant 1 1 insignificant 0.020797 0.581004 insignificant 1 insignificant 0.22537 0.055798 0.16323 8 0.26623 0.18887 0.077354 9.912e-07 9.9908e-01 weaklyHypermeth 0.0004956 1.00000000 weaklyHypermeth 0.00022833 0.9998197 weaklyHypermeth 0.11416 1 insignificant 0.19207 0.011310 weaklyHypermeth 1 insignificant chr5 99202367 99203367 58811 ENSG00000200351 0.76638 104 6 0.61532 95 6 0.45556 54 6 0.748459 94 6 0.76767 58 6 0.82715 185 6 0.52778 70 6 0.768421 117 6 0.77525 44 6 0.63929 51 6 0.71816 176 6 0.63889 14 0 0.744698 99 6 0.722150 56 6 0.640572 71 6 0.657143 28 4 1.000000 4 0 0.88154 97 6 0.66621 82 6 0.643070 146 6 0.7133 26 2 0.916667 31 2 0.732073 47 2 0.95022 48 6 0.811905 39 6 0.64118 115 6 0.49923 43 2 0.616667 11 2 0.80704 70 6 0.74604 117 6 0.80417 78 6 0.77889 147 6 0.70500 100 6 0.63787 95 6 0.65673 96 6 1.00000 6 0 0.68918 45 6 0.70873 119 6 0.845238 61 6 0.868524 82 6 0.938113 58 6 0.84416 48 6 0.84228 71 6 0.780878 0.614941 0.748611 0.872196 0.732821 0.85639 0.484762 0.898184 0.790303 0.763500 0.742132 0.650000 0.795896 0.816258 0.801136 0.796000 0.880006 0.802982 0.765127 0.829232 0.72649 0.950000 0.725265 0.93439 0.834667 0.764484 0.588266 0.680632 0.805833 0.792147 0.769485 0.796031 0.68797 0.679653 0.78392 1.00000 0.60812 0.75645 0.824107 0.833462 0.900515 0.976364 0.883455 2 0.76984 0.78238 -0.0066661 6 0.70977 0.77815 -0.0683824 0.87700 0.38271 insignificant 1 1 insignificant 0.85795 0.32724 insignificant 1 1 insignificant -0.041262 0.36995 lowCoverage 1 lowCoverage 0.77041 0.69197 0.076639 6 0.71846 0.70318 0.015288 0.0076591 9.6725e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.40648 8.6808e-01 insignificant 1 1.0000e+00 insignificant -0.022732 0.719039 insignificant 1 insignificant 0.767640 0.878125 -0.1071748 6 0.66040 0.81680 -0.156404 0.99960 0.00026010 weaklyHypometh 1 0.26010 insignificant 1.00000 0.00039578 weaklyHypometh 1 0.39578 insignificant -0.1574765 9.6328e-05 weaklyHypometh 0.08762 weaklyHypometh 0.78153 0.69197 0.079006 6 0.72269 0.70318 0.019516 0.00050882 9.9466e-01 weaklyHypermeth 0.12721 1.0000e+00 insignificant 0.25574 0.95487623 insignificant 1 1.000000 insignificant 0.018530 0.783331 lowCoverage 1 lowCoverage 0.782383 0.880878 -0.0981600 6 0.77815 0.89848 -0.120329 0.99993 0.00040677 weaklyHypometh 1 0.40677 insignificant 0.99999 0.0011569 weaklyHypometh 1 1 insignificant -0.116214 0.011946 lowCoverage 1 lowCoverage 0.69197 0.880126 -0.18105 6 0.70318 0.87310 -0.169927 1.000e+00 1.0006e-07 weaklyHypometh 1.0000000 0.00010006 weaklyHypometh 0.99999945 0.0016648 weaklyHypometh 1.00000 1 insignificant -0.13474 0.057227 insignificant 1 insignificant chr5 105780826 105781826 59225 ENSG00000201790 0.86829 259 7 0.80477 81 7 0.86905 42 4 0.99351 93 7 0.95238 43 7 0.92993 184 7 0.91667 33 3 0.90130 58 7 0.78532 39 4 0.94331 53 7 0.90021 112 7 0.92424 49 7 0.93521 87 7 NA 0 0 0.89796 68 7 0.42500 20 2 0.60000 10 0 0.89688 109 7 0.93929 49 7 0.86500 142 7 0.82976 36 5 0.91519 82 7 0.89618 110 7 0.57429 28 3 0.95238 60 7 0.93237 89 7 0.84240 99 7 0.80867 31 4 0.87092 53 7 0.95330 82 7 0.88912 41 4 0.94333 190 7 0.87279 116 7 0.99160 98 7 0.96000 35 4 0.87459 108 7 0.69821 49 7 0.86564 119 7 0.96748 332 7 0.96613 238 7 0.95180 188 7 0.95050 223 7 0.95827 231 7 0.85037 0.75163 0.78451 0.99495 0.93098 0.91864 0.88047 0.86569 0.72654 0.95879 0.86907 0.87925 0.91792 NA 0.89153 0.41105 0.59399 0.90716 0.90732 0.82779 0.75438 0.92552 0.87254 0.61006 0.96409 0.90646 0.81166 0.72403 0.84567 0.94211 0.86109 0.93827 0.86474 0.98455 0.95825 0.88685 0.66044 0.85090 0.96977 0.97427 0.94955 0.95373 0.94991 1 0.89484 0.88124 0.006691 7 0.89662 0.88964 0.0069823 0.57406 0.71912 insignificant 1 1 insignificant 0.60710 0.57986 insignificant 1 1 insignificant -0.0068882 0.87455 insignificant 1 insignificant 0.89484 0.86667 0.021973 7 0.89662 0.87323 0.023391 0.010954 0.42022 weaklyHypermeth 0.9958 1 insignificant 0.35545 0.44858 insignificant 1 1 insignificant -0.016700 0.75389 insignificant 1 insignificant 0.89484 0.95957 -0.064554 7 0.89662 0.95988 -0.063258 0.99871 0.00546044 weaklyHypometh 1 1.00000 insignificant 0.95597 4.8291e-02 weaklyHypometh 1 1.000000 insignificant -0.098400 0.00539787 weaklyHypometh 0.674733 insignificant 0.88124 0.86667 0.012042 7 0.88964 0.87323 0.016409 0.0569840 0.44494 insignificant 1.00000 1 insignificant 0.44549 0.26714 insignificant 1 1 insignificant -0.0098122 0.85237 insignificant 1 insignificant 0.88124 0.95957 -0.077977 7 0.88964 0.95988 -0.070241 0.99737 0.01992035 weaklyHypometh 1 1.00000 insignificant 0.84501 0.0554487 insignificant 1 1 insignificant -0.091512 0.0113437 weaklyHypometh 1.0000 insignificant 0.86667 0.95957 -0.092481 7 0.87323 0.95988 -0.08665 0.99897 1.5268e-02 weaklyHypometh 1 1.0000000 insignificant 0.97287 0.2182355 insignificant 1 1 insignificant -0.081699 0.1074797 insignificant 1 insignificant chr5 106530212 106531212 59311 ENSG00000209177 0.85810 314 8 0.69444 174 8 0.65901 117 8 0.86549 241 8 0.76429 35 5 0.85686 378 8 0.75317 58 4 0.86793 113 5 0.83682 72 4 0.69751 67 4 0.83488 179 5 0.59278 36 4 0.81421 80 5 1.0000 14 2 0.77181 91 4 0.60000 20 4 0.85333 42 4 0.83633 213 8 0.77456 168 8 0.87213 311 8 0.78857 50 5 0.93333 57 4 0.83616 194 8 0.86239 49 5 0.84583 47 5 0.85243 175 8 0.74367 94 8 0.62321 36 4 0.79454 89 5 0.85282 175 8 0.88399 169 8 0.80217 469 8 0.67291 84 5 0.73097 96 5 0.86167 111 8 0.82662 92 4 0.80667 56 5 0.72867 210 8 0.88513 311 8 0.89416 319 8 0.89344 241 8 0.88626 318 7 0.90968 267 8 0.84887 0.67563 0.78407 0.94348 0.91024 0.88088 0.76368 0.85862 0.82695 0.77290 0.84194 0.68181 0.81232 0.86413 0.78432 0.58843 0.84183 0.87589 0.71145 0.92075 0.81755 0.93464 0.83957 0.85867 0.83987 0.89409 0.78717 0.80051 0.79515 0.86227 0.94916 0.86758 0.71134 0.75705 1.00000 0.82486 0.83115 0.71658 0.91929 0.90681 0.94602 0.89846 0.87632 4 0.83437 0.84539 -0.016138 8 0.81341 0.82327 -0.0098634 0.92830 0.28656 insignificant 1 1 insignificant 0.94380 0.18367 insignificant 1 1 insignificant -0.0280790 0.38924 insignificant 1 insignificant 0.83437 0.76733 0.070894 8 0.81341 0.74806 0.065348 0.014527 0.99685 weaklyHypermeth 1.0000 1 insignificant 0.39441 0.94057 insignificant 1 1 insignificant 0.018929 0.61818 insignificant 1 insignificant 0.83437 0.89766 -0.072379 8 0.81341 0.89251 -0.079105 0.99999 0.00081462 weaklyHypometh 1 0.81462 insignificant 1.00000 2.4257e-05 weaklyHypometh 1 0.024257 weaklyHypometh -0.103549 0.00021811 weaklyHypometh 0.072705 weaklyHypometh 0.84539 0.76733 0.086996 8 0.82327 0.74806 0.075212 0.0007336 0.99900 weaklyHypermeth 0.08151 1 weaklyHypermeth 0.18846 0.98572 insignificant 1 1 insignificant 0.0470077 0.23026 insignificant 1 insignificant 0.84539 0.89766 -0.060619 8 0.82327 0.89251 -0.069241 0.99992 0.00051849 weaklyHypometh 1 0.25924 insignificant 0.99998 0.0024410 weaklyHypometh 1 1 insignificant -0.075470 0.0069943 weaklyHypometh 0.9992 insignificant 0.76733 0.89766 -0.141036 8 0.74806 0.89251 -0.14445 1.00000 2.2282e-06 weaklyHypometh 1 0.0022282 weaklyHypometh 1.00000 0.0012452 weaklyHypometh 1 1 insignificant -0.122478 0.0081412 weaklyHypometh 1 insignificant chr5 116205919 116206919 59903 RPS17P2 ENSG00000197575 0.95667 75 4 0.93394 152 5 0.63063 156 5 0.99200 39 1 0.94838 149 5 0.85339 75 5 0.90079 125 5 0.93345 143 5 0.76309 111 5 0.92600 131 5 0.92454 275 5 0.87997 113 5 0.96922 164 5 0.9375 16 1 0.95738 167 5 0.95917 97 5 0.78366 74 5 1.00000 42 3 0.93503 224 5 0.93421 72 4 0.93333 28 2 1.00000 11 1 0.95423 67 5 0.95810 40 5 1.00000 17 1 0.94988 134 5 0.86330 54 5 0.84095 37 5 0.92451 193 5 0.95421 131 5 0.94094 151 5 0.89444 61 4 0.79864 84 5 0.70961 135 5 0.97895 64 5 1.00000 9 1 0.88393 42 4 0.94646 104 5 0.97143 51 4 0.99355 57 4 0.90333 31 4 0.93333 15 1 1.00000 23 1 0.95333 0.85491 0.56770 0.97333 0.93007 0.88358 0.89466 0.91916 0.80958 0.94324 0.93772 0.90587 0.96558 NA 0.93530 0.92500 0.90976 1.00000 0.90827 0.92737 0.92444 0.98222 0.90077 0.94413 1.00000 0.92215 0.87111 0.85067 0.95100 0.95519 0.94338 0.87407 0.88581 0.77479 0.92982 0.95709 0.91357 0.88692 0.98857 0.97849 0.90711 NA 1.00000 1 0.90250 0.92749 -0.024899 5 0.90229 0.92861 -0.0263205 0.98416 0.10877 insignificant 1 1 insignificant 0.94547 0.23314 insignificant 1 1 insignificant -0.0285398 0.24878 lowCoverage 1 lowCoverage 0.90250 0.84475 0.057947 5 0.90229 0.83829 0.063995 0.028380 0.93705 weaklyHypermeth 1.0000 1 insignificant 0.46735 0.83758 insignificant 1 1 insignificant 0.019688 0.70713 lowCoverage 1 lowCoverage 0.90250 0.96610 -0.061546 1 0.90229 0.96571 -0.063428 0.99329 0.01037235 lowCoverage 1 1.00000 lowCoverage 0.99998 4.0400e-04 lowCoverage 1 0.202001 lowCoverage -0.054378 0.06346925 lowCoverage 1.000000 lowCoverage 0.92749 0.84475 0.082500 5 0.92861 0.83829 0.090315 0.0024813 0.99923 weaklyHypermeth 0.24813 1 insignificant 0.19396 0.98224 insignificant 1 1 insignificant 0.0482274 0.35669 lowCoverage 1 lowCoverage 0.92749 0.96610 -0.044087 1 0.92861 0.96571 -0.037108 0.98678 0.00785569 lowCoverage 1 1.00000 lowCoverage 0.99929 0.0188570 lowCoverage 1 1 lowCoverage -0.025838 0.2928137 lowCoverage 1.0000 lowCoverage 0.84475 0.96610 -0.110364 1 0.83829 0.96571 -0.12742 0.99998 2.9163e-04 lowCoverage 1 0.0972086 lowCoverage 0.99993 0.0182444 lowCoverage 1 1 lowCoverage -0.074065 0.1832154 lowCoverage 1 lowCoverage chr5 118495877 118496877 60020 DMXL1 ENSG00000172869 0.53485 258 7 0.49419 156 7 0.47986 101 6 0.74908 136 7 0.69627 82 6 0.56731 362 7 0.54956 99 7 0.65736 149 7 0.47126 102 5 0.66139 86 5 0.61951 253 8 0.57846 59 4 0.75049 146 8 0.81250 28 2 0.72290 117 5 0.57616 47 2 0.68364 49 4 0.74221 125 8 0.70384 171 7 0.73772 284 7 0.68378 80 7 0.63320 97 7 0.68326 118 7 0.61320 96 7 0.67227 64 7 0.74844 226 7 0.60638 54 6 0.71124 48 4 0.73658 140 7 0.65453 218 7 0.73766 146 7 0.76335 333 7 0.60001 149 7 0.66244 93 7 0.64214 157 7 0.56190 42 4 0.62281 91 7 0.56883 178 7 0.75042 169 7 0.78386 207 8 0.76422 143 7 0.77282 163 7 0.63543 161 7 0.63134 0.57457 0.49982 0.70788 0.72016 0.68655 0.61433 0.62055 0.55342 0.68899 0.65986 0.58199 0.73620 0.70921 0.68475 0.59833 0.70765 0.71676 0.70403 0.71283 0.70723 0.67373 0.64959 0.67499 0.68508 0.70518 0.68618 0.74099 0.67436 0.68078 0.67459 0.71020 0.58305 0.64638 0.65162 0.55581 0.59737 0.64550 0.71521 0.74524 0.72018 0.76032 0.66888 4 0.67544 0.68704 -0.0184613 7 0.64849 0.68197 -0.03347776 0.86823 0.084302 insignificant 1 1 insignificant 0.97492 0.075778 insignificant 1 1 insignificant -0.0475622 0.095045 insignificant 1 insignificant 0.67558 0.63521 0.038093 7 0.65455 0.63358 0.0209721 2.7701e-02 0.95870 weaklyHypermeth 9.5519e-01 1 insignificant 3.1907e-02 0.950915 weaklyHypermeth 1.0000000 1 insignificant 0.029737 0.3021670 insignificant 1.00000 insignificant 0.67544 0.74852 -0.0577917 7 0.64849 0.75856 -0.110074 0.99986 0.00027953 weaklyHypometh 1 0.17544 insignificant 0.99998 0.00098715 weaklyHypometh 1 0.49357 insignificant -0.101922 0.0155162 weaklyHypometh 1.00000 insignificant 0.68653 0.63521 0.0551656 7 0.66999 0.63358 0.0364123 2.0050e-03 0.98975 weaklyHypermeth 9.5477e-02 1 weaklyHypermeth 2.3219e-03 0.99929 weaklyHypermeth 0.25798407 1 insignificant 0.0772988 0.0043774 weaklyHypermeth 0.39795 insignificant 0.68704 0.74852 -0.037942 7 0.68197 0.75856 -0.0765960 0.961724 0.0013937 weaklyHypometh 1 0.46458 insignificant 0.92190 0.0297987 weaklyHypometh 1 1 insignificant -0.054360 0.125693 insignificant 1 insignificant 0.63521 0.74792 -0.0939493 7 0.63358 0.72838 -0.09480502 0.99966 1.7635e-04 weaklyHypometh 1 2.2044e-02 weaklyHypometh 0.99968 0.00177999 weaklyHypometh 1 0.25428 insignificant -0.131659 0.0045701 weaklyHypometh 0.41546 insignificant chr5 119693906 119694906 60044 FAM170A ENSG00000164334 0.91558 183 7 0.73974 59 5 0.88237 91 6 0.91737 149 7 0.64524 28 3 0.74083 214 6 0.73462 55 6 0.84198 62 6 0.89899 42 4 0.65485 64 6 0.75663 177 6 0.90953 59 6 0.91683 57 5 NA 0 0 0.92959 67 6 0.68571 42 5 0.64881 41 5 0.93753 125 7 0.91454 59 5 0.80959 133 6 0.86054 28 2 0.87669 58 5 0.88468 133 7 0.66667 30 4 1.00000 39 5 0.89894 126 6 0.65616 46 4 0.80754 33 3 0.80418 61 4 0.80643 103 6 0.80842 114 6 0.85508 196 6 0.74725 43 4 0.82381 62 6 0.88791 133 6 0.88639 35 5 0.87500 23 2 0.76039 92 6 0.93489 174 7 0.90976 231 7 0.93130 182 7 0.92222 197 7 0.82920 159 7 0.92463 0.78978 0.85815 0.88669 0.77519 0.85989 0.74558 0.85339 0.88693 0.78498 0.88887 0.89909 0.88536 NA 0.93676 0.82139 0.77162 0.91439 0.90568 0.81447 0.88632 0.85350 0.89779 0.83584 1.00000 0.87804 0.74713 0.81463 0.85891 0.89553 0.81765 0.86827 0.74678 0.86692 0.86454 0.86627 0.86316 0.88825 0.92780 0.90726 0.92993 0.92113 0.83686 3 0.86467 0.86556 0.0010805 6 0.85462 0.83777 0.01685578 0.51877 0.693403 insignificant 1 1 insignificant 0.88758 0.340358 insignificant 1 1 insignificant -0.0123581 0.740923 lowCoverage 1 lowCoverage 0.86467 0.83763 0.025587 5 0.85462 0.82795 0.0266727 3.0798e-02 0.68876 weaklyHypermeth 1.0000e+00 1 insignificant 2.6890e-01 0.298176 insignificant 1.0000000 1 insignificant -0.015371 0.6749222 lowCoverage 1.00000 lowCoverage 0.86467 0.92259 -0.0434101 6 0.85462 0.91124 -0.056612 0.98042 0.03078568 weaklyHypometh 1 1.00000 insignificant 0.91361 0.01979775 weaklyHypometh 1 1.00000 insignificant -0.090720 0.0104197 weaklyHypometh 1.00000 insignificant 0.86556 0.83763 0.0252323 5 0.83777 0.82795 0.0098169 8.5182e-02 0.62059 insignificant 1.0000e+00 1 insignificant 1.4652e-01 0.41526 insignificant 1.00000000 1 insignificant -0.0030131 0.9375797 lowCoverage 1.00000 lowCoverage 0.86556 0.92259 -0.039412 6 0.83777 0.91124 -0.0734676 0.992941 0.0386112 weaklyHypometh 1 1.00000 insignificant 0.89557 0.1089808 insignificant 1 1 insignificant -0.078362 0.034855 lowCoverage 1 lowCoverage 0.83763 0.92259 -0.0571762 5 0.82795 0.91124 -0.08328448 0.94758 1.4500e-02 weaklyHypometh 1 8.0555e-01 insignificant 0.61363 0.06737893 insignificant 1 1.00000 insignificant -0.075349 0.0465797 lowCoverage 1.00000 lowCoverage chr5 124078651 124079651 60403 ENSG00000214750 0.66228 186 7 0.68621 122 7 0.72940 114 7 0.79303 191 7 0.72075 60 7 0.82760 195 7 0.69216 88 7 0.70563 124 7 0.53261 94 7 0.66578 77 7 0.67742 216 7 0.62987 42 3 0.83804 122 7 0.90000 33 5 0.76620 89 7 0.65183 64 3 0.57273 35 3 0.77352 157 7 0.81132 94 7 0.64164 173 7 0.57569 49 4 0.76527 78 7 0.76508 127 7 0.49306 51 5 0.86979 63 7 0.83413 116 7 0.88007 68 4 0.93651 27 1 0.68379 88 7 0.75658 136 7 0.76852 146 7 0.60191 205 7 0.66777 95 7 0.73382 107 7 0.74101 164 7 0.51786 31 2 0.64479 53 5 0.52585 102 7 0.82841 184 7 0.85355 173 7 0.67208 202 7 0.77328 203 7 0.78729 205 7 0.78382 0.69956 0.63039 0.83037 0.73798 0.83330 0.77734 0.75164 0.65913 0.80409 0.79926 0.69583 0.85810 0.84961 0.74454 0.73162 0.65625 0.80855 0.84343 0.78854 0.72988 0.84154 0.79990 0.83296 0.88516 0.85250 0.90588 0.93056 0.73258 0.81660 0.80020 0.86655 0.58948 0.78282 0.80878 0.55260 0.77661 0.70508 0.85346 0.86305 0.80370 0.85188 0.81600 1 0.77065 0.81802 -0.0469453 7 0.70005 0.67255 0.02749706 0.92205 0.018201 weaklyHypometh 1 1 insignificant 0.91011 0.019261 weaklyHypometh 1 1 insignificant -0.0302994 0.497619 insignificant 1 insignificant 0.77103 0.72101 0.054599 7 0.70914 0.64734 0.0618074 1.2513e-01 0.96502 insignificant 1.0000e+00 1 insignificant 2.9641e-02 0.919333 weaklyHypermeth 1.0000000 1 insignificant 0.075384 0.1323174 insignificant 1.00000 insignificant 0.77004 0.81489 -0.0586881 7 0.67278 0.74073 -0.067949 0.99484 0.01690501 weaklyHypometh 1 1.00000 insignificant 0.99949 0.00699273 weaklyHypometh 1 1.00000 insignificant -0.069021 0.1024100 insignificant 1.00000 insignificant 0.81858 0.72101 0.1007062 7 0.68824 0.64734 0.0409015 5.2221e-04 0.99244 weaklyHypermeth 3.0718e-02 1 weaklyHypermeth 4.6366e-03 0.99658 weaklyHypermeth 0.26204708 1 insignificant 0.1056833 0.0785005 insignificant 1.00000 insignificant 0.81842 0.81489 -0.010706 7 0.67309 0.74073 -0.0676423 0.868043 0.2775216 insignificant 1 1.00000 insignificant 0.91013 0.6382986 insignificant 1 1 insignificant -0.038721 0.448123 insignificant 1 insignificant 0.72232 0.81470 -0.1100934 7 0.71207 0.71480 -0.00273152 1.00000 3.2923e-03 weaklyHypometh 1 2.3517e-01 insignificant 0.99394 0.00140684 weaklyHypometh 1 0.23447 insignificant -0.144404 0.0193525 weaklyHypometh 1.00000 insignificant chr5 124253051 124254051 60456 ENSG00000214748 0.64932 127 5 0.50554 101 5 0.36975 75 5 0.60344 124 5 0.61667 33 5 0.57127 174 5 0.66508 40 5 0.78659 126 5 0.64863 40 5 0.61310 51 5 0.82959 150 5 0.36667 27 2 0.76654 80 5 0.74082 44 5 0.81389 42 5 0.75714 26 2 0.62500 7 0 0.60952 112 5 0.71394 118 5 0.67491 111 5 0.65000 36 3 0.71818 38 4 0.48623 77 5 0.59916 56 4 0.61212 51 5 0.65720 161 5 0.63432 61 5 0.66327 30 2 0.62271 74 5 0.79447 128 5 0.52948 106 5 0.68261 148 5 0.66883 79 5 0.68278 63 5 0.68365 99 5 0.70000 8 0 0.61404 54 4 0.71118 130 5 0.75178 120 5 0.63214 102 5 0.79508 95 5 0.67636 75 5 0.68835 110 5 0.66063 0.59093 0.51357 0.62333 0.55385 0.67877 0.65171 0.71249 0.63414 0.66987 0.73829 0.41923 0.75408 0.65165 0.79274 0.73077 0.57337 0.71731 0.72261 0.64104 0.55577 0.66014 0.58930 0.67149 0.58625 0.65673 0.62496 0.66667 0.62673 0.73618 0.61510 0.58973 0.60140 0.66913 0.60148 0.76923 0.60351 0.72198 0.68157 0.74423 0.79832 0.71434 0.75655 2 0.67102 0.64700 0.0248751 5 0.65148 0.61365 0.03783673 0.15621 0.799334 insignificant 1 1 insignificant 0.17378 0.880139 insignificant 1 1 insignificant 0.0088912 0.810582 lowCoverage 1 lowCoverage 0.67102 0.64896 0.023282 5 0.65148 0.74996 -0.0984767 5.5403e-01 0.66673 insignificant 1.0000e+00 1 insignificant 6.8671e-01 0.727274 insignificant 1.0000000 1 insignificant -0.030378 0.3476274 lowCoverage 1.00000 lowCoverage 0.67102 0.73904 -0.0680551 5 0.65148 0.67345 -0.021966 0.95915 0.04729502 weaklyHypometh 1 1.00000 insignificant 0.96750 0.04613266 weaklyHypometh 1 1.00000 insignificant -0.062373 0.1479117 lowCoverage 1.00000 lowCoverage 0.64700 0.64896 -0.0031813 5 0.61365 0.74996 -0.1363134 7.1636e-01 0.37236 insignificant 1.0000e+00 1 insignificant 9.2097e-01 0.33424 insignificant 1.00000000 1 insignificant -0.0392692 0.1666270 lowCoverage 1.00000 lowCoverage 0.64700 0.73904 -0.094507 5 0.61365 0.67345 -0.0598031 0.783467 0.0009239 weaklyHypometh 1 0.46458 insignificant 0.94048 0.0022123 weaklyHypometh 1 1 insignificant -0.071265 0.085008 lowCoverage 1 lowCoverage 0.64896 0.73904 -0.0918037 5 0.74996 0.67345 0.07651031 1.00000 4.8200e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.99476 0.15150896 insignificant 1 1.00000 insignificant -0.031995 0.3573926 lowCoverage 1.00000 lowCoverage chr5 124628587 124629587 60526 ENSG00000214748 0.85293 78 4 0.90294 116 5 0.62615 48 5 0.87000 30 4 0.74456 57 5 0.86173 59 5 0.75000 56 5 0.90296 132 5 0.82241 54 3 0.82098 69 5 0.91964 173 5 0.34000 19 3 0.83495 166 5 NA 0 0 0.80879 46 5 0.75000 19 3 0.67698 32 4 0.83505 41 4 0.93067 147 5 0.92000 69 5 0.97778 29 3 1.00000 17 1 0.80715 84 5 0.83333 19 2 0.75000 8 0 0.83648 199 5 0.73157 33 3 0.85000 14 0 0.85733 121 5 0.93493 182 5 0.81310 145 5 0.81095 59 5 0.84408 156 5 0.81214 137 5 0.79792 82 5 1.00000 10 0 0.87000 16 1 0.95119 151 5 0.88095 28 4 0.81310 49 5 0.80417 17 2 0.90286 37 4 0.92778 34 4 0.80430 0.89229 0.62969 0.85563 0.76310 0.83925 0.78081 0.90229 0.80428 0.81424 0.91636 0.43521 0.83515 NA 0.80576 0.70718 0.71853 0.81150 0.94338 0.88263 0.96088 1.00000 0.81757 0.88263 0.75198 0.84578 0.74200 0.77113 0.86186 0.94553 0.83627 0.77649 0.84891 0.82731 0.75780 1.00000 0.78873 0.95793 0.83568 0.79225 0.83920 0.90342 0.91393 0 0.85684 0.89121 -0.0245498 5 0.85349 0.85386 -0.00037056 0.36477 0.160908 insignificant 1 1 insignificant 0.97140 0.035079 weaklyHypometh 1 1 insignificant -0.0517574 0.203833 lowCoverage 1 lowCoverage 0.85684 0.87681 -0.012866 5 0.85349 0.86310 -0.0096091 5.7868e-01 0.40666 insignificant 1.0000e+00 1 insignificant 9.6766e-01 0.034372 weaklyHypometh 1.0000000 1 insignificant -0.080764 0.0972452 lowCoverage 1.00000 lowCoverage 0.85684 0.85455 -0.0089110 4 0.85349 0.86356 -0.010061 0.47753 0.40109673 lowCoverage 1 1.00000 lowCoverage 0.89848 0.08458639 lowCoverage 1 1.00000 lowCoverage -0.067310 0.1115840 lowCoverage 1.00000 lowCoverage 0.89121 0.87681 0.0135109 5 0.85386 0.86310 -0.0092386 6.9301e-02 0.27485 insignificant 1.0000e+00 1 insignificant 4.9602e-01 0.56453 insignificant 1.00000000 1 insignificant -0.0290063 0.4900855 lowCoverage 1.00000 lowCoverage 0.89121 0.85455 -0.011034 4 0.85386 0.86356 -0.0096908 0.014446 0.1811861 lowCoverage 1 1.00000 lowCoverage 0.34874 0.4047835 lowCoverage 1 1 lowCoverage -0.015552 0.658049 lowCoverage 1 lowCoverage 0.87681 0.85455 -0.0018824 4 0.86310 0.86356 -0.00045216 0.52431 4.4475e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.53949 0.73168300 lowCoverage 1 1.00000 lowCoverage 0.013454 0.7500390 lowCoverage 1.00000 lowCoverage chr5 131138282 131139282 60915 ENSG00000177622 0.83185 228 4 0.81667 61 4 0.85552 103 4 0.97805 111 4 0.98750 61 4 0.94065 205 5 0.52364 34 2 0.92667 63 5 0.45667 35 3 0.94000 54 5 0.91218 117 5 0.97500 29 4 0.80915 49 4 NA 0 0 0.97273 51 5 0.70000 23 1 0.79754 45 5 0.87502 132 5 0.75889 70 4 0.92281 250 5 0.87619 34 5 0.97778 40 5 0.87754 161 5 0.71429 15 1 0.97727 33 4 0.82553 154 4 0.71143 23 2 0.87500 21 1 0.74842 83 4 0.97529 184 5 0.82642 172 5 0.88825 194 5 0.86601 138 5 0.73333 38 4 0.78602 318 4 0.74000 25 3 0.90000 23 2 0.73704 197 4 0.76705 146 4 0.97508 173 4 0.97222 120 4 0.96139 172 4 0.94537 163 5 0.89857 0.82229 0.82444 0.97163 0.99172 0.95782 0.67777 0.92771 0.68032 0.91325 0.86515 0.94578 0.83912 NA 0.94085 0.82831 0.78820 0.94532 0.92088 0.90513 0.88296 1.00000 0.82976 0.83349 0.96057 0.92066 0.83373 0.93373 0.93692 0.97921 0.91707 0.91114 0.84581 0.75582 0.85646 0.90602 1.00000 0.83553 0.93926 0.97078 0.98394 0.94516 0.91797 1 0.90296 0.91831 -0.0125669 5 0.89690 0.90666 -0.00975559 0.89149 0.421556 insignificant 1 1 insignificant 0.70293 0.417169 insignificant 1 1 insignificant -0.0150371 0.733531 lowCoverage 1 lowCoverage 0.90296 0.85521 0.062160 5 0.89690 0.82230 0.0746018 1.3904e-04 0.78979 weaklyHypermeth 7.3181e-03 1 weaklyHypermeth 9.0799e-02 0.580406 insignificant 1.0000000 1 insignificant 0.047346 0.3072505 lowCoverage 1.00000 lowCoverage 0.90296 0.96124 -0.0444344 4 0.89690 0.93636 -0.039461 0.98359 0.09678249 lowCoverage 1 1.00000 lowCoverage 0.96724 0.13503880 lowCoverage 1 1.00000 lowCoverage -0.083140 0.1401682 lowCoverage 1.00000 lowCoverage 0.91831 0.85521 0.0720619 5 0.90666 0.82230 0.0843574 4.8397e-05 0.75031 weaklyHypermeth 3.7228e-03 1 weaklyHypermeth 1.9229e-01 0.76051 insignificant 1.00000000 1 insignificant 0.0623827 0.1472447 lowCoverage 1.00000 lowCoverage 0.91831 0.96124 -0.031649 4 0.90666 0.93636 -0.0297053 0.986049 0.0416839 lowCoverage 1 1.00000 lowCoverage 0.90918 0.4029250 lowCoverage 1 1 lowCoverage -0.068103 0.195585 lowCoverage 1 lowCoverage 0.85521 0.96124 -0.0976386 4 0.82230 0.93636 -0.11406269 0.92445 2.5227e-04 lowCoverage 1 2.8030e-02 lowCoverage 0.59667 0.14764322 lowCoverage 1 1.00000 lowCoverage -0.130486 0.0305979 lowCoverage 1.00000 lowCoverage chr5 132122075 132123075 60950 CCNI2 ENSG00000205089 0.90651 389 7 0.87798 239 7 0.85982 181 7 0.83222 180 7 0.83597 118 7 0.75652 367 6 0.93479 194 7 0.86719 174 7 0.94591 111 7 0.85985 101 7 0.92917 351 7 0.94729 83 5 0.94987 132 7 0.94036 77 5 0.81202 127 7 0.96477 92 7 0.82456 49 3 0.78270 228 7 0.97269 283 7 0.94516 402 6 0.92424 80 7 0.79720 30 3 0.77757 227 7 0.86636 159 7 0.95238 37 4 0.93904 297 7 0.84872 135 6 0.90821 103 7 0.74559 370 7 0.93786 242 7 0.96275 257 7 0.95495 463 7 0.90619 206 7 0.82070 228 7 0.98625 118 3 0.63636 36 3 0.92291 141 7 0.80106 379 7 0.96643 445 7 0.92429 441 7 0.95771 215 6 0.93615 378 7 0.95394 246 7 0.89524 0.89475 0.80448 0.96027 0.97775 0.81026 0.94569 0.83943 0.93593 0.97339 0.92718 0.93122 0.91639 0.92558 0.93635 0.95642 0.85008 0.86816 0.97069 0.92696 0.88000 0.84877 0.87609 0.78072 0.95935 0.94523 0.85937 0.91754 0.85335 0.92668 0.94605 0.94911 0.89197 0.69662 0.90571 0.90560 0.86549 0.79589 0.95065 0.91293 0.94653 0.91463 0.93676 3 0.92470 0.92625 -0.0018840 7 0.80536 0.80879 -0.00342417 0.91502 0.582448 insignificant 1 1 insignificant 0.53529 0.487882 insignificant 1 1 insignificant 0.0026956 0.919423 insignificant 1 insignificant 0.92470 0.90975 0.023268 7 0.80536 0.76680 0.0385617 7.6148e-02 0.39412 insignificant 1.0000e+00 1 insignificant 5.4161e-01 0.323173 insignificant 1.0000000 1 insignificant 0.041688 0.4566819 insignificant 1.00000 insignificant 0.92614 0.95188 -0.0210325 7 0.92041 0.94419 -0.023781 0.99047 0.06960171 insignificant 1 1.00000 insignificant 0.93698 0.24771698 insignificant 1 1.00000 insignificant -0.060437 0.0012538 weaklyHypometh 0.31346 insignificant 0.92625 0.90975 0.0239794 7 0.80879 0.76680 0.0419859 1.5277e-01 0.43275 insignificant 1.0000e+00 1 insignificant 6.5270e-01 0.21075 insignificant 1.00000000 1 insignificant 0.0389928 0.5002667 insignificant 1.00000 insignificant 0.92818 0.95188 -0.020847 7 0.92433 0.94419 -0.0198678 0.964042 0.0689679 insignificant 1 1.00000 insignificant 0.85659 0.1923333 insignificant 1 1 insignificant -0.063133 0.017375 weaklyHypometh 1 insignificant 0.91057 0.95188 -0.0423035 7 0.87634 0.94419 -0.06785163 0.66995 1.8545e-01 insignificant 1 1.0000e+00 insignificant 0.52990 0.48236609 insignificant 1 1.00000 insignificant -0.102126 0.0983442 insignificant 1.00000 insignificant chr5 132808957 132809957 60990 MIR1289-2 ENSG00000221287 0.86232 101 5 0.77756 81 4 0.70114 44 4 0.84885 92 5 0.78125 19 2 0.89552 110 7 0.84375 22 2 0.83960 77 4 0.55556 25 2 0.91667 35 4 0.78311 99 4 0.33333 7 0 0.94042 84 4 NA 0 0 0.98333 46 4 0.75000 6 0 1.00000 4 0 0.89023 124 4 0.87458 90 5 0.90632 67 4 0.90972 44 4 0.74167 62 4 0.86935 70 4 0.81534 33 4 0.88416 39 4 0.90426 110 5 0.92917 57 4 0.80556 11 1 0.92938 66 4 0.82986 113 4 0.94602 131 4 0.91980 107 5 0.45493 78 4 0.57908 82 4 0.26923 118 6 0.30382 70 4 0.65238 35 4 0.61446 121 5 0.78198 36 4 0.81970 81 5 0.76571 66 5 0.86813 39 4 0.93095 86 5 0.86640 0.76439 0.68182 0.87836 0.80189 0.83387 0.72170 0.81718 0.80713 0.92453 0.81413 0.44940 0.94776 NA 0.97484 0.78056 0.96924 0.77266 0.82108 0.84240 0.98270 0.70535 0.89535 0.89280 0.89916 0.88749 0.87799 0.72804 0.91469 0.89787 0.93173 0.88153 0.59661 0.61743 0.88534 0.66632 0.80773 0.80182 0.84694 0.84698 0.89569 0.92432 0.97201 1 0.83392 0.88019 -0.0463688 4 0.88184 0.90972 -0.02787769 0.99957 0.125545 lowCoverage 1 1 lowCoverage 0.99502 0.283628 lowCoverage 1 1 lowCoverage -0.0587673 0.154849 lowCoverage 1 lowCoverage 0.83392 0.55070 0.255113 4 0.88184 0.39575 0.4860907 4.2234e-16 1.00000 lowCoverage 1.0559e-13 1 lowCoverage 2.6108e-06 0.999998 lowCoverage 0.0014423 1 lowCoverage 0.335939 0.0021167 lowCoverage 0.23519 lowCoverage 0.83392 0.82143 -0.0031961 4 0.88184 0.87318 0.008659 0.59302 0.60169334 lowCoverage 1 1.00000 lowCoverage 0.50176 0.66222592 lowCoverage 1 1.00000 lowCoverage -0.018371 0.6995299 lowCoverage 1.00000 lowCoverage 0.88019 0.55070 0.3025038 4 0.90972 0.39575 0.5139684 9.1542e-16 1.00000 lowCoverage 9.1542e-13 1 lowCoverage 4.0643e-07 1.00000 lowCoverage 0.00040643 1 lowCoverage 0.3947063 0.0014500 lowCoverage 0.16111 lowCoverage 0.88019 0.82143 0.047688 4 0.90972 0.87318 0.0365366 0.180217 0.9742551 lowCoverage 1 1.00000 lowCoverage 0.20236 0.9785611 lowCoverage 1 1 lowCoverage 0.040396 0.287663 lowCoverage 1 lowCoverage 0.55070 0.82143 -0.2989816 5 0.39575 0.87318 -0.47743173 1.00000 4.8646e-07 hypomethylated 1 7.7914e-05 hypomethylated 1.00000 0.00017642 hypomethylated 1 0.10438 insignificant -0.354310 0.0019711 lowCoverage 0.24713 lowCoverage chr5 133281416 133282416 61052 ENSG00000208898 0.938606 137 4 0.877983 96 5 0.879941 79 4 0.777141 171 4 0.755556 29 3 0.949187 148 5 0.918462 54 4 0.8905469 70 5 0.885455 44 4 1.0000000 57 5 0.878930 181 5 0.7266667 36 4 0.9282784 54 4 1.000000 6 1 0.9488889 65 4 0.9722222 30 3 0.964286 22 3 0.9529961 153 4 0.885714 43 5 0.938961 46 4 0.987500 62 5 0.911905 46 3 0.833851 103 5 1.0000000 49 4 0.948810 49 4 0.9408333 83 5 0.849809 74 5 0.816667 26 3 0.8777778 45 5 0.9753788 98 5 0.9833333 71 5 0.955215 163 5 0.5866270 81 5 0.541453 55 5 0.5772059 49 2 0.804167 38 3 0.812288 49 4 0.7353175 81 5 0.854118 114 4 0.935933 121 5 0.934686 108 4 0.6784157 121 4 0.923995 117 5 0.910146 0.896506 0.922012 0.9651996 0.9331662 0.933411 0.901677 0.926665 0.8462064 1.000000 0.897950 0.9208020 0.895442 NA 0.9565581 0.97326650 0.957035 0.945400 0.9248120 0.920271 0.981203 0.9021124 0.896725 1.000000 0.9374150 0.9245927 0.880104 0.959900 0.830409 0.9807331 0.987469 0.9373927 0.5793651 0.6484802 0.7054845 0.810777 0.818045 0.7142215 0.938803 0.9252019 0.906207 0.6834887 0.923751 3 0.921762 0.930955 -0.01179798 5 0.910172 0.932162 -0.0219896 0.7647631 2.3275e-01 insignificant 1.00000 1.0000e+00 insignificant 0.776576 4.0442e-01 insignificant 1 1.0000e+00 insignificant -0.0199323 0.433870 lowCoverage 1 lowCoverage 0.921762 0.6883853 0.2316242 5 0.910172 0.6830365 0.2271359 9.8202e-12 1.0000e+00 hypermethylated 3.7770e-10 1.0000e+00 hypermethylated 1.7032e-07 1.0000e+00 hypermethylated 1.1256e-05 1.0000e+00 hypermethylated 0.2273147 4.6049e-03 lowCoverage 1.5350e-01 lowCoverage 0.921762 0.874355 0.0492310 4 0.910172 0.8831418 0.0270307 4.8614e-03 8.9264e-01 lowCoverage 1.3139e-01 1.0000e+00 lowCoverage 5.7796e-02 9.2031e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03806165 4.9689e-01 lowCoverage 1.0000e+00 lowCoverage 0.930955 0.6883853 0.2435520 5 0.932162 0.6830365 0.249125 3.2561e-09 1.0000e+00 hypermethylated 1.2524e-07 1.0000e+00 hypermethylated 1.7112e-06 1.0000e+00 hypermethylated 9.5069e-05 1.00000000 hypermethylated 0.2472469 2.9205e-03 lowCoverage 1.0817e-01 lowCoverage 0.930955 0.874355 0.05946753 4 0.932162 0.8831418 0.0490202 1.2616e-02 9.8206e-01 lowCoverage 2.8036e-01 1.00000000 lowCoverage 8.3555e-02 0.96934973 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0579939 3.1811e-01 lowCoverage 1.0000000 lowCoverage 0.6883853 0.874355 -0.1889698 4 0.6830365 0.8831418 -0.2001053 9.9991e-01 2.4294e-03 lowCoverage 1.0000e+00 7.0858e-02 lowCoverage 9.9998e-01 6.5012e-03 lowCoverage 1.000000 2.7088e-01 lowCoverage -0.1892530 2.4388e-02 lowCoverage 0.74155924 lowCoverage chr5 133281553 133282553 61053 ENSG00000208898 0.923322 269 6 0.843410 232 7 0.873388 170 6 0.808474 268 6 0.761071 109 5 0.943252 417 7 0.907615 148 6 0.8833577 174 7 0.913420 104 6 0.9774436 133 7 0.867303 317 7 0.7917749 80 6 0.8928822 131 6 0.880952 62 3 0.9128641 166 6 0.9814815 70 5 0.964286 22 3 0.9177930 390 6 0.888588 273 7 0.924029 232 6 0.991071 115 7 0.941270 52 3 0.852750 183 7 0.9920635 85 6 0.965873 58 5 0.9353755 287 7 0.849647 200 7 0.856180 92 5 0.8790249 291 7 0.9558926 292 7 0.9627351 285 7 0.940227 307 7 0.5797336 177 7 0.446276 175 7 0.5588050 207 4 0.702778 44 3 0.724877 136 6 0.7650998 281 7 0.857479 293 6 0.919726 287 7 0.917633 236 6 0.7305127 338 6 0.903640 232 7 0.895614 0.815517 0.884279 0.9196982 0.8412783 0.930512 0.889384 0.891095 0.9258006 0.954176 0.863289 0.9403881 0.842593 0.866021 0.8789206 0.98878374 0.908982 0.888509 0.9079559 0.900784 0.992114 0.9589304 0.898626 0.983877 0.9737419 0.9229315 0.862191 0.957034 0.860438 0.9380381 0.943222 0.9172899 0.5695759 0.3930006 0.6096649 0.630389 0.637124 0.7869706 0.896478 0.8985064 0.888093 0.7712620 0.882542 5 0.891426 0.916778 -0.02773043 7 0.898946 0.925232 -0.0262852 0.9386560 1.6761e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.951293 9.1363e-03 weaklyHypometh 1 8.0068e-01 insignificant -0.0340073 0.104155 insignificant 1 insignificant 0.891426 0.6098039 0.2812054 7 0.898946 0.6503508 0.2485957 2.3460e-18 1.0000e+00 hypermethylated 1.6757e-16 1.0000e+00 hypermethylated 1.1812e-10 1.0000e+00 hypermethylated 1.6874e-08 1.0000e+00 hypermethylated 0.2632405 2.5026e-03 weaklyHypermeth 1.0428e-01 insignificant 0.891426 0.865801 0.0262954 6 0.898946 0.8764498 0.0224967 7.6939e-03 9.2292e-01 weaklyHypermeth 1.8489e-01 1.0000e+00 insignificant 9.2462e-02 9.3532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02703701 5.0729e-01 insignificant 1.0000e+00 insignificant 0.916778 0.6098039 0.3080895 7 0.925232 0.6503508 0.274881 1.4710e-14 1.0000e+00 hypermethylated 1.1316e-12 1.0000e+00 hypermethylated 1.8609e-09 1.0000e+00 hypermethylated 2.6585e-07 1.00000000 hypermethylated 0.2972478 1.2501e-03 weaklyHypermeth 6.2507e-02 weaklyHypermeth 0.916778 0.865801 0.05229050 6 0.925232 0.8764498 0.0487818 2.0146e-04 9.9905e-01 weaklyHypermeth 9.1575e-03 1.00000000 weaklyHypermeth 7.8558e-04 0.99795993 weaklyHypermeth 5.2372e-02 1.00000 weaklyHypermeth 0.0610443 1.7072e-01 insignificant 1.0000000 insignificant 0.6098039 0.865801 -0.2613239 6 0.6503508 0.8764498 -0.2260991 1.0000e+00 5.4990e-05 hypomethylated 1.0000e+00 2.3909e-03 hypomethylated 1.0000e+00 2.2686e-04 hypomethylated 1.000000 1.8905e-02 hypomethylated -0.2362035 4.1368e-03 weaklyHypometh 0.22982338 insignificant chr5 133829639 133830639 61078 ENSG00000145835 0.016817 341 12 0.014389 363 12 0.013680 423 12 0.005466 410 8 0.000000 295 12 0.015482 504 12 0.017979 445 12 0.0115175 353 12 0.015307 360 12 0.0096251 402 12 0.032970 435 12 0.0075493 431 12 0.0098224 431 12 0.016304 163 8 0.0096869 459 12 0.0064935 287 12 0.025819 255 11 0.0063991 354 8 0.000000 264 12 0.017828 396 12 0.101382 183 12 0.012263 315 8 0.036612 311 12 0.0085417 186 11 0.012820 216 8 0.0025687 539 12 0.016484 313 12 0.013881 248 12 0.0051282 330 12 0.0113568 497 12 0.0087358 556 12 0.034996 533 12 0.0077182 301 12 0.016229 322 12 0.0567797 132 7 0.010623 139 8 0.049866 146 11 0.0030864 305 12 0.041692 432 11 0.037737 322 11 0.108571 316 8 0.0295217 256 9 0.103396 320 8 0.025156 0.019606 0.014954 0.0073101 0.0000000 0.023087 0.022592 0.012720 0.0090745 0.015851 0.039454 0.0041918 0.014544 0.018080 0.0077196 0.00071094 0.025487 0.010483 0.0000000 0.024320 0.031253 0.0163369 0.021033 0.013439 0.0133665 0.0039143 0.028527 0.021468 0.000542 0.0085176 0.013044 0.0122629 0.0083297 0.0057003 0.0754708 0.017886 0.029781 0.0039747 0.056065 0.0382982 0.032409 0.0242740 0.037553 8 0.014923 0.016560 -0.00147616 12 0.013413 0.030964 -0.0175517 0.5616097 3.1834e-01 insignificant 1.00000 1.0000e+00 insignificant 0.767184 6.5560e-01 insignificant 1 1.0000e+00 insignificant -0.0094072 0.263742 insignificant 1 insignificant 0.014923 0.0156134 -0.0009172 12 0.013413 0.0152469 -0.0018344 7.1968e-01 2.6665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9202e-01 7.3728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0113935 2.8641e-01 insignificant 1.0000e+00 insignificant 0.014927 0.041920 -0.0240060 11 0.014530 0.0440963 -0.0295660 9.7671e-01 6.5256e-08 weaklyHypometh 1.0000e+00 3.2628e-05 weaklyHypometh 9.7844e-01 8.2364e-04 weaklyHypometh 1.0000e+00 2.0591e-01 insignificant -0.05152669 3.9648e-02 weaklyHypometh 1.0000e+00 insignificant 0.016560 0.0156134 0.0010475 12 0.030964 0.0152469 0.015717 3.6168e-01 6.9940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6088e-01 9.0640e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0019863 8.7427e-01 insignificant 1.0000e+00 insignificant 0.016343 0.041920 -0.02444276 11 0.016878 0.0440963 -0.0272184 9.9778e-01 1.2357e-05 weaklyHypometh 1.0000e+00 0.00617870 weaklyHypometh 9.9505e-01 0.00279209 weaklyHypometh 1.0000e+00 0.93070 insignificant -0.0421195 6.9354e-02 insignificant 1.0000000 insignificant 0.0156250 0.041920 -0.0226723 11 0.0165175 0.0440963 -0.0275788 9.6928e-01 6.1665e-04 weaklyHypometh 1.0000e+00 1.9892e-02 weaklyHypometh 9.8997e-01 1.2736e-02 weaklyHypometh 1.000000 4.2454e-01 insignificant -0.0401332 8.4458e-02 insignificant 1.00000000 insignificant chr5 134421660 134422660 61122 PITX1 ENSG00000069011 0.857143 76 5 0.740196 104 4 0.772222 20 1 0.618269 111 4 0.700000 10 0 0.773582 119 5 0.771429 15 1 0.7815476 37 3 0.720391 23 2 0.6875000 18 2 0.780996 96 5 0.4722222 9 0 0.4296296 54 3 0.923077 13 1 0.4333333 19 2 0.7500000 3 0 0.083333 8 0 0.4262821 89 1 0.772523 58 2 0.622222 73 5 0.900000 16 2 0.574074 30 2 0.763889 34 2 0.5873016 37 5 0.933333 22 2 0.6828526 99 5 0.576623 42 3 0.375000 8 0 0.7483333 39 3 0.7488329 82 5 0.7094949 94 5 0.876229 128 5 0.6337394 66 5 0.444872 37 2 0.4866898 135 3 0.124005 59 4 0.645604 47 4 0.5365681 83 5 0.427273 60 5 0.523273 81 4 0.490909 52 4 0.5392157 36 2 0.682857 84 4 0.830688 0.700617 0.591564 0.5856481 0.7133954 0.895609 0.941799 0.817791 0.7323294 0.953704 0.790693 0.4104938 0.475720 0.720051 0.5296296 0.71984250 0.101852 0.559312 0.7958792 0.632099 0.907407 0.5905350 0.830247 0.645503 0.8641975 0.6454706 0.666186 0.611111 0.887346 0.7028046 0.661317 0.8787681 0.4521908 0.3969611 0.7093180 0.351449 0.663885 0.2914219 0.500000 0.5321989 0.407407 0.5479303 0.623192 0 0.784293 0.795563 -0.03235352 4 0.666327 0.548906 0.1174203 0.9954123 4.6725e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.869609 3.8010e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0505354 0.436361 lowCoverage 1 lowCoverage 0.783841 0.4145199 0.3190465 4 0.610714 0.5026514 0.1080631 2.6258e-08 1.0000e+00 lowCoverage 6.7328e-07 1.0000e+00 lowCoverage 6.0590e-03 9.9891e-01 lowCoverage 1.2892e-01 1.0000e+00 lowCoverage 0.1772151 8.1130e-02 lowCoverage 1.0000e+00 lowCoverage 0.785115 0.629393 0.0867312 4 0.777381 0.4751155 0.3022656 6.7490e-03 8.0993e-01 lowCoverage 1.6873e-01 1.0000e+00 lowCoverage 1.2222e-02 4.9723e-01 lowCoverage 3.9427e-01 1.0000e+00 lowCoverage 0.12308929 6.3152e-02 lowCoverage 1.0000e+00 lowCoverage 0.801917 0.4145199 0.3600385 5 0.640391 0.5026514 0.137739 6.4560e-10 1.0000e+00 hypermethylated 2.8069e-08 1.0000e+00 hypermethylated 1.4530e-05 9.9982e-01 hypermethylated 6.6045e-04 1.00000000 hypermethylated 0.2277506 3.4159e-02 lowCoverage 6.6979e-01 lowCoverage 0.796825 0.629393 0.13001170 4 0.640391 0.4751155 0.1652753 4.4406e-04 8.2490e-01 lowCoverage 1.4802e-02 1.00000000 lowCoverage 9.1141e-03 0.95861345 lowCoverage 3.0756e-01 1.00000 lowCoverage 0.1736247 1.6131e-02 lowCoverage 0.7681267 lowCoverage 0.4131455 0.631410 -0.1864751 4 0.4031816 0.5701386 -0.1669570 8.3720e-01 3.1696e-03 lowCoverage 1.0000e+00 8.8045e-02 lowCoverage 9.2631e-01 5.8879e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0541259 5.5927e-01 lowCoverage 1.00000000 lowCoverage chr5 134542546 134543546 61142 PITX1 ENSG00000069011 0.808740 157 7 0.710373 545 7 0.706004 157 7 0.605000 167 6 0.861641 105 7 0.765715 326 6 0.745974 147 5 0.7277644 162 4 0.789751 132 7 0.8682117 93 5 0.904544 281 5 0.4880952 40 4 0.8096500 164 7 0.737500 70 4 0.8754386 126 7 0.3416667 27 3 0.778889 46 4 0.6418312 131 5 0.667227 289 5 0.681257 245 5 0.984615 49 4 0.777778 18 1 0.517699 114 3 0.7144725 57 4 0.828283 52 2 0.6899443 322 7 0.618990 74 4 0.618153 71 4 0.8862144 234 5 0.7552480 356 5 0.9387655 268 3 0.604953 232 3 0.3913250 147 3 0.089691 178 5 0.2629735 153 3 0.389423 61 1 0.283266 194 5 0.4124662 367 3 0.694822 270 6 0.709439 245 7 0.740708 162 6 0.7540998 267 6 0.732729 247 4 0.803100 0.565712 0.585493 0.6671355 0.7804057 0.801745 0.718018 0.719751 0.6735261 0.753203 0.832564 0.3858785 0.729022 0.742529 0.8498185 0.46839080 0.711077 0.602500 0.8308275 0.701584 0.982317 0.7895508 0.693877 0.811037 0.7114826 0.7387572 0.651553 0.807392 0.854833 0.7099743 0.937169 0.8949081 0.3626341 0.0741445 0.3018665 0.070960 0.307489 0.3158916 0.714841 0.6739427 0.641364 0.6496783 0.700241 1 0.737012 0.806067 -0.08351864 5 0.826209 0.631133 0.1950760 0.5106503 2.0042e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.805306 1.6578e-03 weaklyHypometh 1 3.3155e-01 insignificant -0.0188293 0.718493 lowCoverage 1 lowCoverage 0.731411 0.3500000 0.3779062 4 0.790840 0.2279178 0.5629221 5.1619e-26 1.0000e+00 lowCoverage 4.6927e-24 1.0000e+00 lowCoverage 1.0097e-07 1.0000e+00 lowCoverage 7.2118e-06 1.0000e+00 lowCoverage 0.4209062 4.9353e-05 lowCoverage 3.7964e-03 lowCoverage 0.736858 0.718724 0.0196854 6 0.804485 0.6429420 0.1615430 1.2577e-01 9.1124e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8034e-01 6.3674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00059602 9.8535e-01 insignificant 1.0000e+00 insignificant 0.806769 0.3500000 0.4459177 4 0.701566 0.2279178 0.473649 1.9300e-19 1.0000e+00 lowCoverage 1.7545e-17 1.0000e+00 lowCoverage 7.6303e-07 1.0000e+00 lowCoverage 5.0869e-05 1.00000000 lowCoverage 0.4397355 2.1833e-05 lowCoverage 1.8195e-03 lowCoverage 0.806504 0.718724 0.09905086 4 0.710024 0.6429420 0.0670825 2.3335e-04 8.4628e-01 lowCoverage 9.7228e-03 1.00000000 lowCoverage 7.3260e-03 0.86814802 lowCoverage 2.7133e-01 1.00000 lowCoverage 0.0182333 6.7965e-01 lowCoverage 1.0000000 lowCoverage 0.3500000 0.713172 -0.3505633 4 0.2279178 0.6073777 -0.3794599 1.0000e+00 1.6082e-11 lowCoverage 1.0000e+00 2.2975e-09 lowCoverage 1.0000e+00 9.2164e-05 lowCoverage 1.000000 8.3786e-03 lowCoverage -0.4215022 2.7675e-04 lowCoverage 0.03146549 lowCoverage chr5 134845977 134846977 61176 ENSG00000214707 0.859812 266 5 0.738960 205 5 0.793659 204 5 0.793429 237 5 0.699808 96 5 0.875667 317 5 0.779302 207 5 0.8926541 217 5 0.827335 196 5 0.8424051 155 5 0.868315 193 7 0.7846754 105 5 0.8390373 153 5 0.884615 16 1 0.8488888 168 5 0.8069458 81 4 0.802785 88 4 0.7910490 271 5 0.882006 168 5 0.862384 239 5 0.727772 63 3 0.686538 102 4 0.857445 222 5 0.8177453 73 5 0.906220 64 4 0.8629860 328 7 0.839987 145 5 0.876447 81 5 0.8651288 182 5 0.8859759 328 5 0.9415321 299 7 0.879842 287 5 0.6064653 228 5 0.480000 143 5 0.7416667 65 4 0.656818 42 4 0.773859 107 7 0.7503068 300 5 0.735633 311 5 0.547728 287 5 0.487279 286 5 0.4963629 285 5 0.585188 240 5 0.893532 0.855097 0.840654 0.8282935 0.7445955 0.849956 0.841028 0.888563 0.8600905 0.886327 0.850495 0.7964435 0.851270 0.873124 0.8669093 0.81743807 0.799567 0.823908 0.9019306 0.824423 0.704382 0.6821241 0.808064 0.782847 0.9022409 0.9042927 0.805332 0.918819 0.891530 0.9046640 0.940063 0.8543083 0.6558279 0.4715999 0.8185451 0.584259 0.700081 0.5915179 0.665854 0.6514960 0.520770 0.5279109 0.605574 5 0.832775 0.857406 -0.02104985 5 0.835379 0.867054 -0.0316754 0.9842040 1.1805e-01 insignificant 1.00000 1.0000e+00 insignificant 0.963314 1.2373e-01 insignificant 1 1.0000e+00 insignificant -0.0219484 0.369169 lowCoverage 1 lowCoverage 0.832775 0.6067797 0.2177614 5 0.835379 0.6472321 0.1881467 3.2919e-11 9.6076e-01 hypermethylated 1.1352e-09 1.0000e+00 hypermethylated 1.5205e-03 9.2253e-01 weaklyHypermeth 3.8988e-02 1.0000e+00 weaklyHypermeth 0.1555006 1.7945e-02 lowCoverage 4.6014e-01 lowCoverage 0.832775 0.601845 0.2496684 5 0.835379 0.5560742 0.2793046 3.2449e-29 1.0000e+00 hypermethylated 1.6224e-26 1.0000e+00 hypermethylated 1.2919e-10 9.9998e-01 hypermethylated 6.4593e-08 1.0000e+00 hypermethylated 0.25324823 3.7814e-03 lowCoverage 3.1511e-01 lowCoverage 0.857406 0.6067797 0.2437778 5 0.867054 0.6472321 0.219822 2.2048e-08 9.8792e-01 hypermethylated 6.8900e-07 1.0000e+00 hypermethylated 1.6290e-03 9.8876e-01 weaklyHypermeth 4.0724e-02 1.00000000 weaklyHypermeth 0.1774490 9.2256e-03 weaklyHypermeth 2.6359e-01 insignificant 0.857406 0.601845 0.26889468 5 0.867054 0.5560742 0.3109800 1.8262e-19 1.0000e+00 hypermethylated 9.1309e-17 1.00000000 hypermethylated 9.3833e-10 0.99999990 hypermethylated 4.6916e-07 1.00000 hypermethylated 0.2751966 1.6045e-03 weaklyHypermeth 0.1604534 insignificant 0.6067797 0.601845 0.0183610 5 0.6472321 0.5560742 0.0911579 1.2444e-04 7.5002e-01 weaklyHypermeth 2.4888e-02 1.0000e+00 weaklyHypermeth 1.2871e-02 8.3236e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0977477 1.6198e-01 insignificant 1.00000000 insignificant chr5 137821646 137822646 61345 REEP2 ENSG00000132563 0.836691 303 7 0.715281 218 7 0.677551 121 7 0.777585 274 7 0.728362 61 4 0.734691 364 7 0.570641 95 7 0.8612726 133 7 0.834134 110 7 0.7666259 107 7 0.812987 248 7 0.5725417 35 5 0.7804924 152 7 0.947310 70 7 0.7257428 98 7 0.6369048 39 4 0.952381 15 2 0.6499631 436 7 0.823079 331 7 0.663012 275 7 0.753676 70 6 0.617211 62 5 0.804295 135 7 0.7244674 129 7 0.699653 50 4 0.8328791 311 7 0.650644 130 7 0.809524 47 4 0.7139943 223 7 0.8375768 330 7 0.8185988 354 7 0.803385 343 7 0.2550861 257 7 0.343478 243 7 0.4220360 259 6 0.250000 10 1 0.326034 114 7 0.2589389 402 7 0.594079 298 7 0.656696 294 7 0.707330 247 7 0.6401604 335 6 0.621784 282 7 0.846477 0.766990 0.689286 0.8057654 0.7753679 0.881719 0.703263 0.888396 0.8624340 0.886793 0.806303 0.6294980 0.739634 0.925996 0.7647223 0.62353801 0.833353 0.769686 0.8599104 0.875499 0.905917 0.6393314 0.849046 0.859569 0.8395874 0.8612593 0.784146 0.938179 0.849409 0.8783132 0.863806 0.8105262 0.2395366 0.3051891 0.5392861 0.222035 0.376684 0.2465928 0.653949 0.7059187 0.721398 0.7096845 0.735827 1 0.707436 0.773498 -0.04604984 7 0.727531 0.634427 0.0931036 0.7238646 6.9005e-02 insignificant 1.00000 1.0000e+00 insignificant 0.704621 1.0151e-01 insignificant 1 1.0000e+00 insignificant -0.0021297 0.947654 insignificant 1 insignificant 0.707303 0.2101167 0.5091551 7 0.718472 0.2955625 0.4229097 3.3540e-34 1.0000e+00 hypermethylated 5.5900e-32 1.0000e+00 hypermethylated 1.3293e-12 9.9998e-01 hypermethylated 2.2155e-10 1.0000e+00 hypermethylated 0.4441003 1.4604e-08 hypermethylated 2.4340e-06 hypermethylated 0.707184 0.394918 0.2370508 7 0.694198 0.6109306 0.0832669 7.3273e-07 5.1171e-01 hypermethylated 4.8849e-05 1.0000e+00 hypermethylated 5.3311e-04 6.9026e-01 hypermethylated 3.5541e-02 1.0000e+00 hypermethylated 0.10935255 2.2319e-03 weaklyHypermeth 2.0290e-01 insignificant 0.773853 0.2101167 0.5522500 7 0.713731 0.2955625 0.418168 2.1806e-31 9.9823e-01 hypermethylated 3.1151e-29 1.0000e+00 hypermethylated 1.4510e-11 9.9672e-01 hypermethylated 2.9020e-09 1.00000000 hypermethylated 0.4462300 6.7717e-08 hypermethylated 1.2829e-05 hypermethylated 0.773853 0.395189 0.25159520 7 0.713731 0.6872969 0.0264338 1.2676e-11 9.8419e-01 hypermethylated 2.5352e-09 1.00000000 hypermethylated 1.6753e-05 0.52003106 hypermethylated 2.3933e-03 1.00000 hypermethylated 0.1114822 1.8075e-03 weaklyHypermeth 0.1643209 insignificant 0.2101167 0.395189 -0.2810027 7 0.2955625 0.6872969 -0.3917344 1.0000e+00 5.4226e-12 hypomethylated 1.0000e+00 9.0377e-10 hypomethylated 1.0000e+00 1.1861e-07 hypomethylated 1.000000 5.9304e-05 hypomethylated -0.3347477 5.9273e-06 hypomethylated 0.00296365 hypomethylated chr5 138326693 138327693 61388 LRRTM2 ENSG00000146006 0.766546 229 5 0.813291 130 5 0.716522 76 5 0.690110 170 5 0.762857 45 5 0.826404 207 5 0.825799 78 5 0.8238192 95 5 0.842479 76 5 0.8314815 57 5 0.789594 218 5 0.7011278 38 2 0.7727757 88 5 0.944444 18 1 0.6576923 66 2 0.8166667 39 5 0.368590 25 2 0.6532169 151 5 0.709737 93 5 0.748593 197 5 0.833333 39 2 0.409091 49 2 0.714403 105 5 0.9750000 61 5 0.728773 160 5 0.7373524 145 5 0.780147 68 5 0.941667 25 2 0.5799228 100 2 0.6810352 172 5 0.6031513 203 5 0.829936 190 5 0.9188716 141 5 0.896162 104 5 0.9459459 73 5 0.622222 67 5 0.912925 90 5 0.6403140 247 5 0.322096 331 5 0.367195 179 5 0.398982 193 5 0.5283136 142 2 0.488378 210 5 0.752314 0.783217 0.754523 0.6465763 0.7124667 0.768843 0.829101 0.782614 0.7971237 0.787037 0.844513 0.6801242 0.724937 0.839656 0.5802676 0.82209406 0.443765 0.573789 0.6818568 0.748324 0.968944 0.3328628 0.788171 0.905590 0.6723802 0.7323081 0.707930 0.904762 0.652258 0.7099096 0.763156 0.8445666 0.8593464 0.9108395 0.8724190 0.334714 0.910424 0.3835396 0.201922 0.2586121 0.251294 0.3529422 0.392360 2 0.738550 0.753986 -0.01764171 5 0.725602 0.767221 -0.0416184 0.4802671 7.7215e-01 insignificant 1.00000 1.0000e+00 insignificant 0.649947 4.7885e-01 insignificant 1 1.0000e+00 insignificant 0.0186030 0.725748 lowCoverage 1 lowCoverage 0.738152 0.7119114 0.0393581 5 0.760964 0.8031878 -0.0422240 3.9727e-01 6.3272e-07 inconclusive 1.0000e+00 1.0545e-04 inconclusive 9.9861e-01 1.7185e-04 inconclusive 1.0000e+00 3.4371e-02 inconclusive -0.0696529 3.2807e-01 lowCoverage 1.0000e+00 lowCoverage 0.738152 0.322275 0.4324487 5 0.760964 0.3943714 0.3665923 1.8057e-24 9.9862e-01 hypermethylated 6.0188e-22 1.0000e+00 hypermethylated 3.8966e-08 9.9810e-01 hypermethylated 9.7416e-06 1.0000e+00 hypermethylated 0.33209424 8.5677e-05 lowCoverage 1.7135e-02 lowCoverage 0.754035 0.7119114 0.0773254 5 0.757553 0.8031878 -0.045635 5.1494e-01 2.6075e-04 inconclusive 1.0000e+00 3.7251e-02 inconclusive 9.6129e-01 2.8458e-03 inconclusive 1.0000e+00 0.71146220 insignificant -0.0882559 2.7099e-01 lowCoverage 1.0000e+00 lowCoverage 0.754035 0.322275 0.47165852 5 0.757553 0.3943714 0.3631816 1.4110e-13 9.9995e-01 hypermethylated 3.5276e-11 1.00000000 hypermethylated 5.3149e-07 0.99997383 hypermethylated 1.3287e-04 1.00000 hypermethylated 0.3134913 1.3117e-04 lowCoverage 0.0289756 lowCoverage 0.7119114 0.322275 0.3925316 5 0.8031878 0.3943714 0.4088163 6.7822e-13 1.0000e+00 hypermethylated 6.7822e-10 1.0000e+00 hypermethylated 3.0155e-05 1.0000e+00 hypermethylated 0.030155 1.0000e+00 hypermethylated 0.4017472 4.8986e-04 lowCoverage 0.04453314 lowCoverage chr5 138468672 138469672 61411 ENSG00000201532 0.735375 104 6 0.653369 227 10 0.465263 176 6 0.588333 73 6 0.740756 70 6 0.852645 147 9 0.716622 212 10 0.6478355 134 10 0.512024 122 6 0.6250389 94 6 0.683467 369 10 0.5400382 143 6 0.4723655 194 6 0.666667 13 0 0.4903711 170 6 0.6275515 112 6 0.501462 119 5 0.3241228 78 6 0.882942 170 6 0.635818 130 6 0.635238 79 8 0.250000 7 0 0.552860 156 6 0.4385101 102 10 0.708333 20 1 0.7950554 293 10 0.461481 109 7 0.805556 31 2 0.6607794 172 6 0.6518190 262 10 0.3854556 325 10 0.806320 178 6 0.1086916 237 10 0.112265 197 6 0.0677974 420 10 0.263462 41 5 0.185266 94 7 0.3168520 246 10 0.147085 186 10 0.130515 157 6 0.197540 86 9 0.2050481 102 6 0.221190 60 6 0.749030 0.586160 0.606399 0.6269928 0.6450715 0.795294 0.640900 0.632047 0.5139301 0.619640 0.619427 0.5480333 0.347025 0.752796 0.5638521 0.57251842 0.569844 0.438771 0.8750465 0.629530 0.570807 0.4228982 0.676868 0.481445 0.6413043 0.7380493 0.446860 0.734300 0.530050 0.6121116 0.371993 0.7034032 0.1228771 0.1554638 0.0582167 0.290296 0.251785 0.2400011 0.192151 0.2218559 0.234357 0.3252369 0.106004 4 0.614981 0.595732 0.02560643 6 0.660738 0.602246 0.0584922 0.0513086 9.8881e-01 insignificant 1.00000 1.0000e+00 insignificant 0.357641 7.8244e-01 insignificant 1 1.0000e+00 insignificant 0.0221527 0.717603 insignificant 1 insignificant 0.614981 0.1506073 0.4596312 6 0.660738 0.1453625 0.5153753 1.3025e-42 1.0000e+00 hypermethylated 3.2562e-40 1.0000e+00 hypermethylated 2.9054e-16 1.0000e+00 hypermethylated 7.2635e-14 1.0000e+00 hypermethylated 0.4423811 1.9159e-06 hypermethylated 1.9159e-04 hypermethylated 0.614981 0.199662 0.4183406 6 0.660738 0.1893004 0.4714374 1.3403e-36 1.0000e+00 hypermethylated 1.3403e-33 1.0000e+00 hypermethylated 4.5512e-18 1.0000e+00 hypermethylated 4.5512e-15 1.0000e+00 hypermethylated 0.43782776 1.7860e-11 hypermethylated 1.7860e-08 hypermethylated 0.595732 0.1506073 0.4397073 10 0.602246 0.1453625 0.456883 4.7975e-28 1.0000e+00 hypermethylated 5.9968e-26 1.0000e+00 hypermethylated 2.8207e-13 1.0000e+00 hypermethylated 9.4024e-11 1.00000000 hypermethylated 0.4202284 9.4246e-06 hypermethylated 9.4246e-04 hypermethylated 0.595732 0.199662 0.39431462 6 0.602246 0.1893004 0.4129452 9.4068e-25 1.0000e+00 hypermethylated 9.4068e-22 1.00000000 hypermethylated 7.3593e-14 1.00000000 hypermethylated 7.3593e-11 1.00000 hypermethylated 0.4156751 3.7941e-06 hypermethylated 0.0018970 hypermethylated 0.1506073 0.199662 -0.0384141 6 0.1453625 0.1893004 -0.0439379 7.9563e-01 1.4621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1735e-01 3.3792e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0045533 9.1990e-01 insignificant 1.00000000 insignificant chr5 138609673 138610673 61443 ENSG00000208799 0.780986 208 5 0.682567 143 5 0.548542 63 3 0.711590 168 6 0.837999 54 5 0.765690 249 5 0.805318 65 5 0.7709114 135 5 0.826389 63 5 0.7452381 42 3 0.836614 273 7 0.2000000 8 0 0.7544192 114 6 0.877761 50 5 0.7768141 79 5 0.6366667 29 2 0.916667 275 1 0.8616246 154 5 0.756984 175 5 0.725116 210 5 0.618750 62 5 0.639966 47 5 0.758929 63 5 0.9000000 61 5 0.914286 33 4 0.8285985 134 5 0.874405 58 4 0.603896 19 1 0.7363050 104 5 0.8469599 146 5 0.8438447 138 6 0.875764 263 6 0.8504274 108 5 0.676923 90 5 0.6943780 125 5 0.800000 5 0 0.702339 83 5 0.7501832 132 5 0.880117 110 6 0.837607 188 5 0.830808 179 5 0.8288889 96 5 0.866735 158 6 0.812093 0.739914 0.616769 0.8091925 0.7746072 0.838130 0.794656 0.887902 0.8423660 0.902098 0.882395 0.4405594 0.766582 0.845958 0.9129870 0.61538462 0.912587 0.895986 0.8507264 0.787630 0.818182 0.8419830 0.885115 0.972028 0.9450549 0.8397568 0.867632 0.687540 0.717256 0.8259354 0.827376 0.8655949 0.8751569 0.7740721 0.8011008 0.860140 0.818305 0.8960014 0.883573 0.8839280 0.856008 0.8623776 0.858026 1 0.852504 0.846631 -0.01050214 5 0.728658 0.801082 -0.0724239 0.9725803 4.3325e-01 insignificant 1.00000 1.0000e+00 insignificant 0.995024 3.3448e-01 insignificant 1 1.0000e+00 insignificant -0.0459138 0.338881 lowCoverage 1 lowCoverage 0.852722 0.8655617 -0.0156194 5 0.735546 0.7135406 0.0220059 3.8781e-01 5.0996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0132e-01 2.6107e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048136 9.1411e-01 lowCoverage 1.0000e+00 lowCoverage 0.853161 0.886457 -0.0367961 5 0.767131 0.8716901 -0.1045589 9.8837e-01 1.7907e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5702e-01 8.7257e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.10793637 6.3184e-03 lowCoverage 4.2123e-01 lowCoverage 0.846495 0.8655617 -0.0025634 5 0.778980 0.7135406 0.065440 9.0006e-02 6.3220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8161e-01 6.7710e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0411002 3.5203e-01 lowCoverage 1.0000e+00 lowCoverage 0.847670 0.886457 -0.02775947 5 0.792023 0.8716901 -0.0796676 9.1572e-01 5.3168e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.7389e-01 0.14758839 insignificant 1.0000e+00 1.00000 insignificant -0.0620226 9.2595e-02 lowCoverage 1.0000000 lowCoverage 0.8669131 0.886457 -0.0174458 5 0.7745522 0.8716901 -0.0971379 5.6611e-01 7.8026e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0453e-01 2.4617e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1031228 1.2106e-02 lowCoverage 0.48424220 lowCoverage chr5 138780446 138781446 61458 SPATA24 ENSG00000170469 0.645923 118 5 0.567055 105 5 0.496586 77 5 0.624524 83 5 0.742308 38 2 0.549164 160 5 0.648634 83 5 0.6196891 98 5 0.575046 64 5 0.6095238 65 5 0.687067 124 5 0.2086538 32 2 0.5655072 83 5 0.450000 19 2 0.4820513 77 5 0.7861111 29 2 0.170455 32 2 0.5981264 74 3 0.628804 69 5 0.587631 121 5 0.680000 35 3 0.471667 36 5 0.682397 81 5 0.5931235 70 4 0.528571 33 2 0.5853669 155 5 0.684615 31 2 0.600000 27 2 0.5681905 57 5 0.5742529 109 5 0.5440481 132 5 0.658272 129 5 0.5520305 125 5 0.395556 53 2 0.3941176 37 2 0.333333 18 2 0.555159 53 5 0.5893519 69 5 0.634226 86 3 0.487619 89 2 0.716153 71 5 0.6652465 90 2 0.563921 87 5 0.688472 0.638705 0.532793 0.6680591 0.7625343 0.609450 0.614248 0.639807 0.5491901 0.689626 0.670138 0.4959220 0.656561 0.623884 0.5959249 0.59908234 0.414773 0.646125 0.6430512 0.612657 0.585714 0.5622024 0.703634 0.668514 0.6052296 0.6198106 0.581387 0.643427 0.639507 0.6355706 0.603732 0.6256601 0.5448269 0.5119048 0.4294541 0.630580 0.685994 0.6075149 0.652105 0.7056973 0.736531 0.7098296 0.652949 2 0.597034 0.615642 0.00039182 5 0.584800 0.586399 -0.0015985 0.5903308 5.7196e-01 insignificant 1.00000 1.0000e+00 insignificant 0.782715 5.7651e-01 insignificant 1 1.0000e+00 insignificant -0.0353991 0.370653 lowCoverage 1 lowCoverage 0.597034 0.5633803 0.0672093 5 0.584800 0.5324195 0.0523805 8.5354e-04 7.7465e-01 weaklyHypermeth 1.3548e-02 1.0000e+00 weaklyHypermeth 3.4712e-03 9.2478e-01 weaklyHypermeth 8.1327e-02 1.0000e+00 weaklyHypermeth 0.0922184 1.2317e-01 lowCoverage 1.0000e+00 lowCoverage 0.597034 0.621749 -0.0632916 3 0.584800 0.6151864 -0.0303864 4.9188e-01 1.4518e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3972e-01 1.1828e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05129006 3.4827e-01 lowCoverage 1.0000e+00 lowCoverage 0.615642 0.5633803 0.0659990 5 0.586399 0.5324195 0.053979 1.1979e-04 6.6239e-01 weaklyHypermeth 2.6041e-03 1.0000e+00 weaklyHypermeth 2.2986e-04 8.2908e-01 weaklyHypermeth 6.3849e-03 1.00000000 weaklyHypermeth 0.1276174 3.2854e-02 lowCoverage 6.5709e-01 lowCoverage 0.615642 0.621749 -0.06232272 3 0.586399 0.6151864 -0.0287878 5.7442e-01 9.0639e-03 lowCoverage 1.0000e+00 1.00000000 lowCoverage 6.3304e-01 0.01154373 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0158910 7.3311e-01 lowCoverage 1.0000000 lowCoverage 0.5633803 0.621749 -0.1259525 3 0.5324195 0.6151864 -0.0827669 4.3713e-01 2.5049e-04 lowCoverage 1.0000e+00 8.6377e-03 lowCoverage 8.8005e-01 2.7291e-03 lowCoverage 1.000000 1.2405e-01 lowCoverage -0.1435084 3.9073e-02 lowCoverage 0.95300822 lowCoverage chr5 139019224 139020224 61474 CXXC5 ENSG00000171604 0.538058 482 9 0.374209 492 12 0.565699 548 12 0.561076 459 11 0.266779 363 11 0.717911 550 12 0.402848 459 11 0.4449926 417 11 0.473001 510 11 0.5589946 519 11 0.590207 436 11 0.4722061 387 11 0.1875720 545 10 0.411390 366 6 0.3736371 553 11 0.4633717 242 11 0.349337 150 8 0.3146440 620 11 0.252277 387 10 0.498146 444 12 0.518903 210 10 0.263302 287 10 0.635821 375 12 0.2719114 297 10 0.506197 296 9 0.5080085 567 12 0.328033 455 10 0.369042 348 11 0.5357269 418 11 0.4320485 576 12 0.4642520 557 12 0.637672 545 12 0.0489972 478 12 0.009355 305 10 0.1058955 426 7 0.024901 150 9 0.107916 420 10 0.0544007 566 12 0.504085 450 10 0.437244 497 11 0.514471 397 10 0.4305501 482 11 0.423828 578 11 0.431518 0.338939 0.519508 0.4705145 0.2814011 0.675351 0.414656 0.488341 0.4164163 0.452188 0.543796 0.4296127 0.165801 0.457259 0.3951258 0.37067138 0.324515 0.326767 0.2366621 0.385046 0.530290 0.2943456 0.660887 0.399004 0.4256258 0.4633343 0.383093 0.383718 0.500851 0.3788222 0.416745 0.5837513 0.0165137 0.0092775 0.0527256 0.041530 0.040774 0.0469293 0.325264 0.3280172 0.480233 0.3847682 0.347305 9 0.414763 0.464814 -0.04049927 11 0.424186 0.471261 -0.0470758 0.9404189 8.9576e-02 insignificant 1.00000 1.0000e+00 insignificant 0.947870 3.9665e-01 insignificant 1 1.0000e+00 insignificant -0.0150919 0.749851 insignificant 1 insignificant 0.414678 0.0456485 0.3840505 11 0.410714 0.1207762 0.2899383 1.9727e-43 1.0000e+00 hypermethylated 6.5758e-41 1.0000e+00 hypermethylated 2.0499e-21 1.0000e+00 hypermethylated 2.0499e-18 1.0000e+00 hypermethylated 0.3822402 4.2201e-11 hypermethylated 1.0550e-08 hypermethylated 0.414760 0.428453 0.0442125 10 0.486191 0.5215870 -0.0353963 8.0067e-03 9.5361e-01 weaklyHypermeth 1.8620e-01 1.0000e+00 insignificant 2.3639e-02 6.6281e-01 weaklyHypermeth 6.5665e-01 1.0000e+00 insignificant -0.02121807 5.5210e-01 insignificant 1.0000e+00 insignificant 0.464706 0.0456485 0.4194759 12 0.441887 0.1207762 0.321111 3.8946e-43 1.0000e+00 hypermethylated 1.9473e-40 1.0000e+00 hypermethylated 3.9779e-19 1.0000e+00 hypermethylated 3.9779e-16 1.00000000 hypermethylated 0.3973321 7.1483e-08 hypermethylated 1.2829e-05 hypermethylated 0.465324 0.428215 0.09199409 11 0.508617 0.4874147 0.0212020 3.1136e-04 9.8525e-01 weaklyHypermeth 1.1532e-02 1.00000000 weaklyHypermeth 7.0085e-03 0.93421915 weaklyHypermeth 2.6956e-01 1.00000 insignificant -0.0061262 8.8443e-01 insignificant 1.0000000 insignificant 0.0446544 0.428215 -0.3449292 11 0.0659979 0.4874147 -0.4214167 1.0000e+00 5.7739e-35 hypomethylated 1.0000e+00 5.7739e-32 hypomethylated 1.0000e+00 4.7525e-14 hypomethylated 1.000000 4.7525e-11 hypomethylated -0.4034583 1.5783e-07 hypomethylated 0.00015783 hypomethylated chr5 139020148 139021148 61475 CXXC5 ENSG00000171604 0.646009 153 6 0.631189 255 9 0.567679 224 9 0.654679 136 7 0.538194 36 3 0.615733 164 8 0.701463 69 5 0.6614859 128 6 0.564574 99 6 0.6479437 103 6 0.795091 178 6 0.4897343 57 6 0.4986561 222 6 0.789474 19 1 0.4199495 123 6 0.2272727 13 1 0.596892 57 5 0.4471223 179 7 0.606944 105 6 0.525437 157 8 0.701023 59 3 0.320797 103 6 0.623707 122 8 0.4396368 73 6 0.425052 67 6 0.7271998 294 9 0.556133 100 6 0.427778 26 1 0.6193246 113 6 0.7199389 321 9 0.6919121 304 9 0.830753 221 7 0.0970207 318 9 0.071223 127 6 0.0495627 109 6 0.147454 90 6 0.044650 98 6 0.2054162 297 9 0.434494 246 8 0.279924 320 9 0.412200 161 6 0.3202507 244 7 0.433566 240 7 0.585566 0.670995 0.561581 0.5820158 0.4806777 0.662905 0.650796 0.677919 0.5773869 0.669076 0.766230 0.4971731 0.520506 NA 0.4550117 0.42473184 0.620203 0.360152 0.6052503 0.624350 0.689247 0.4018382 0.706707 0.513454 0.4646509 0.7990211 0.555946 0.429853 0.635173 0.7658259 0.784576 0.7888480 0.0881630 0.0611027 0.1543361 0.109310 0.043533 0.1474161 0.444686 0.3577617 0.393415 0.4042542 0.355117 2 0.591038 0.684415 -0.09186160 6 0.605232 0.660572 -0.0553393 0.9900795 4.2583e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.896871 4.0546e-01 insignificant 1 1.0000e+00 insignificant -0.0089950 0.868336 insignificant 1 insignificant 0.591038 0.1154957 0.4766416 6 0.605232 0.1211074 0.4841249 1.8137e-31 1.0000e+00 hypermethylated 2.2672e-29 1.0000e+00 hypermethylated 7.9476e-18 1.0000e+00 hypermethylated 3.9738e-15 1.0000e+00 hypermethylated 0.4787218 2.8691e-10 hypermethylated 5.7383e-08 hypermethylated 0.591038 0.317093 0.2298684 6 0.605232 0.3442077 0.2610246 1.7476e-13 1.0000e+00 hypermethylated 3.4952e-11 1.0000e+00 hypermethylated 2.9963e-09 9.9991e-01 hypermethylated 9.9876e-07 1.0000e+00 hypermethylated 0.20518931 5.0524e-04 hypermethylated 6.3155e-02 hypermethylated 0.684415 0.1154957 0.5697842 8 0.660572 0.1211074 0.539464 1.7939e-32 1.0000e+00 hypermethylated 3.5878e-30 1.0000e+00 hypermethylated 1.6258e-14 1.0000e+00 hypermethylated 8.1289e-12 1.00000000 hypermethylated 0.4877168 7.6971e-08 hypermethylated 1.2829e-05 hypermethylated 0.684415 0.317093 0.33340038 7 0.660572 0.3442077 0.3163640 4.6157e-17 1.0000e+00 hypermethylated 1.5386e-14 1.00000000 hypermethylated 1.5472e-07 0.99934644 hypermethylated 5.1573e-05 1.00000 hypermethylated 0.2141843 1.5458e-03 weaklyHypermeth 0.1604534 insignificant 0.1154957 0.317093 -0.2354104 7 0.1211074 0.3442077 -0.2231003 1.0000e+00 9.7245e-09 hypomethylated 1.0000e+00 8.1037e-07 hypomethylated 1.0000e+00 1.2723e-06 hypomethylated 1.000000 2.6468e-04 hypomethylated -0.2735325 1.4558e-04 hypomethylated 0.02079654 hypomethylated chr5 139030847 139031847 61476 CXXC5 ENSG00000171604 0.619108 60 6 0.607441 151 9 0.532967 140 8 0.666667 24 2 0.721126 122 9 0.770299 74 6 0.660579 204 7 0.6923810 137 7 0.581257 89 7 0.5276188 84 7 0.785075 213 9 0.7671364 144 7 0.2956123 227 9 0.640152 41 3 0.3966814 172 9 0.4273459 81 6 0.413055 138 6 0.4024691 48 3 0.625432 146 7 0.555311 60 5 0.866780 38 4 0.500000 14 1 0.758211 80 6 0.5200216 54 5 0.760823 28 1 0.6302554 102 7 0.704082 38 5 0.508315 69 7 0.6973388 51 4 0.6754263 123 7 0.5104396 114 9 0.799444 70 7 0.0647299 125 8 0.033256 107 9 0.4996225 135 5 0.458333 7 0 0.681319 54 6 0.2166667 107 9 0.408712 58 7 0.257870 65 7 0.613636 44 3 0.4023810 25 1 0.347724 72 6 0.728758 0.779634 0.619048 0.7843137 0.8284830 0.870915 0.872504 0.950980 0.7680481 0.769542 0.819224 0.8573468 0.557892 NA 0.6247303 0.67592135 0.696108 0.402685 0.6505463 0.328431 0.850373 0.6108725 0.877781 0.798436 1.0000000 0.6541694 0.581793 0.779487 0.721982 0.7620448 0.463119 0.8897059 0.1054720 0.0729467 0.6916877 NA 0.687029 0.0000000 0.460784 0.0039216 0.803922 0.6039216 0.248366 0 0.642038 0.649168 0.00677236 5 0.589931 0.612579 -0.0226474 0.6978799 3.0023e-01 insignificant 1.00000 1.0000e+00 insignificant 0.931454 7.9313e-02 insignificant 1 1.0000e+00 insignificant -0.0765424 0.124178 insignificant 1 insignificant 0.642613 0.2915888 0.4044617 5 0.593608 0.2608775 0.3327301 6.2912e-17 1.0000e+00 hypermethylated 4.1942e-15 1.0000e+00 hypermethylated 2.8915e-07 1.0000e+00 hypermethylated 1.7009e-05 1.0000e+00 hypermethylated 0.2587312 5.9247e-02 insignificant 1.0000e+00 insignificant 0.642038 0.280303 0.3158958 3 0.589931 0.3754632 0.2144680 9.1110e-12 9.9999e-01 lowCoverage 1.5185e-09 1.0000e+00 lowCoverage 2.2886e-04 9.9860e-01 lowCoverage 1.9072e-02 1.0000e+00 lowCoverage 0.17832080 3.3453e-02 lowCoverage 1.0000e+00 lowCoverage 0.649032 0.2915888 0.3986602 5 0.608715 0.2608775 0.347838 2.3891e-10 1.0000e+00 hypermethylated 1.1377e-08 1.0000e+00 hypermethylated 5.2357e-07 1.0000e+00 hypermethylated 3.7398e-05 1.00000000 hypermethylated 0.3352736 2.3657e-02 weaklyHypermeth 5.1427e-01 insignificant 0.649168 0.280303 0.31037507 0 0.612579 0.3754632 0.2371155 4.3785e-08 9.9999e-01 noCoverage 4.8650e-06 1.00000000 noCoverage 1.1476e-03 0.99998555 noCoverage 7.1726e-02 1.00000 noCoverage 0.2548632 7.1135e-03 lowCoverage 0.4184420 lowCoverage 0.2915888 0.274809 -0.0870580 0 0.2608775 0.3308534 -0.0699759 9.9286e-01 2.4607e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.9993e-01 1.4330e-01 noCoverage 1.000000 1.0000e+00 noCoverage -0.0804104 5.2746e-01 lowCoverage 1.00000000 lowCoverage chr5 139044215 139045215 61478 CXXC5 ENSG00000171604 0.533182 159 6 0.448831 96 7 0.593723 59 5 0.478873 117 6 0.420635 31 4 0.732946 161 6 0.351109 77 6 0.5273146 106 6 0.349206 45 3 0.6648810 56 6 0.710285 158 6 0.6309524 25 1 0.4514629 154 7 NA 0 0 0.6493764 69 5 0.3750000 25 1 0.368687 39 3 0.6437460 121 6 0.212353 116 7 0.298535 223 6 0.638187 58 6 0.498851 84 6 0.634049 81 6 0.5000000 26 1 0.672659 59 6 0.5549496 159 6 0.512629 91 6 0.422078 34 3 0.5396825 81 6 0.6207169 113 7 0.3627550 206 6 0.578765 215 6 0.5241211 108 6 0.430426 111 6 0.2222222 72 2 0.633578 47 4 0.448810 38 4 0.7461155 130 6 0.298395 97 6 0.605750 163 6 0.554813 82 6 0.6865156 105 6 0.191990 148 6 0.574919 0.541760 0.533495 0.4919518 0.2799408 0.757188 0.388619 0.439820 0.4550827 0.589317 0.683792 0.6789514 0.422009 NA 0.6096125 0.35106383 0.389104 0.622876 0.1658701 0.364434 0.578969 0.5858295 0.649809 0.557624 0.6942079 0.5536756 0.448242 0.475903 0.546314 0.7034812 0.337005 0.5772699 0.4738781 0.4581295 0.5141697 0.678817 0.498860 0.6882758 0.376185 0.6282438 0.579248 0.6514145 0.183282 0 0.474143 0.512013 -0.03891185 6 0.502846 0.495184 0.0076618 0.5336708 1.9139e-01 insignificant 1.00000 1.0000e+00 insignificant 0.965109 8.3528e-02 insignificant 1 1.0000e+00 insignificant -0.0477102 0.283213 lowCoverage 1 lowCoverage 0.474143 0.4901186 -0.0176090 6 0.502846 0.6118530 -0.1090074 2.2651e-01 5.0740e-05 weaklyHypometh 1.0000e+00 6.3425e-03 weaklyHypometh 3.6576e-01 4.0929e-03 weaklyHypometh 1.0000e+00 4.7838e-01 insignificant -0.0039788 9.6239e-01 lowCoverage 1.0000e+00 lowCoverage 0.474143 0.426891 0.0352780 6 0.502846 0.3999500 0.1028957 1.7928e-01 8.8644e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4722e-01 7.0922e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02940720 7.8190e-01 lowCoverage 1.0000e+00 lowCoverage 0.512013 0.4901186 0.0243967 6 0.495184 0.6118530 -0.116669 2.1582e-02 1.1013e-03 weaklyHypermeth 3.0397e-01 1.3551e-01 insignificant 3.6511e-02 1.2810e-02 weaklyHypermeth 6.4054e-01 1.00000000 insignificant 0.0437314 5.9657e-01 lowCoverage 1.0000e+00 lowCoverage 0.512013 0.426891 0.07879021 6 0.495184 0.3999500 0.0952339 3.0021e-02 9.8169e-01 weaklyHypermeth 5.8864e-01 1.00000000 insignificant 7.3346e-02 0.98786093 insignificant 1.0000e+00 1.00000 insignificant 0.0771174 4.7094e-01 insignificant 1.0000000 insignificant 0.4901186 0.426891 0.0470424 6 0.6118530 0.3999500 0.2119031 7.8683e-02 8.1012e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2301e-02 9.0456e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0333860 7.8802e-01 lowCoverage 1.00000000 lowCoverage chr5 139061050 139062050 61485 CXXC5 ENSG00000171604 0.146465 40 6 0.013333 141 5 0.045845 188 5 0.031250 67 6 0.000000 94 5 0.252778 83 6 0.061542 166 5 0.0187500 130 5 0.123879 101 5 0.1686275 72 5 0.048710 178 5 0.0297946 145 5 0.0111111 151 5 NA 0 0 0.0313090 158 5 0.0411738 124 5 0.185714 130 5 0.2166667 24 0 0.114695 164 7 0.108333 49 5 0.117857 45 5 0.000000 19 2 0.046154 116 5 0.0403846 53 5 0.200000 5 0 0.0155433 237 7 0.046154 56 5 0.016667 66 5 0.0952475 85 5 0.0393385 212 7 0.0606128 195 7 0.147321 77 7 0.6387879 61 5 0.756840 83 5 0.4000000 67 6 0.390196 68 3 0.782222 42 4 0.0637259 127 7 0.021930 75 4 0.145833 46 6 0.111111 28 3 0.1250000 19 0 0.136667 43 4 0.138889 0.013889 0.045802 0.0520833 0.0000000 0.161458 0.056629 0.011719 0.1501515 0.173203 0.051458 0.0366679 0.017361 NA 0.0283401 0.03835312 0.018254 0.201389 0.0040323 0.069444 0.093006 0.0000000 0.093269 0.031651 0.2083333 0.0297956 0.048077 0.017361 0.110658 0.0149644 0.025585 0.0892857 0.6515152 0.6823052 0.6041667 0.468750 0.815278 0.1067513 0.034722 0.0208333 0.000000 0.2152778 0.157986 0 0.041723 0.043777 -0.00191385 5 0.164399 0.075358 0.0890415 0.4075795 5.6847e-01 insignificant 1.00000 1.0000e+00 insignificant 0.412671 8.3131e-01 insignificant 1 1.0000e+00 insignificant 0.0180676 0.470060 lowCoverage 1 lowCoverage 0.041723 0.4541387 -0.4622813 5 0.164399 0.3333367 -0.1689377 9.9631e-01 1.0947e-20 hypomethylated 1.0000e+00 5.4736e-18 hypomethylated 9.9972e-01 2.9663e-09 hypomethylated 1.0000e+00 1.4832e-06 hypomethylated -0.4184545 1.3011e-02 lowCoverage 3.5166e-01 lowCoverage 0.041723 0.061611 -0.0327268 1 0.164399 0.1433819 0.0210171 7.1117e-01 2.4876e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.6186e-01 9.9770e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02126732 4.7184e-01 lowCoverage 1.0000e+00 lowCoverage 0.043739 0.4531250 -0.4424165 5 0.069078 0.3055586 -0.236481 1.0000e+00 1.2637e-12 hypomethylated 1.0000e+00 6.3186e-10 hypomethylated 1.0000e+00 1.3721e-07 hypomethylated 1.0000e+00 0.00013721 hypomethylated -0.4365220 1.0997e-02 weaklyHypometh 2.9721e-01 insignificant 0.043777 0.061611 -0.04098673 1 0.075358 0.1433819 -0.0680244 4.9782e-01 3.1886e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 6.7144e-01 0.93408830 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0393349 1.9688e-01 lowCoverage 1.0000000 lowCoverage 0.4541387 0.061611 0.2584059 3 0.3333367 0.1433819 0.1899548 1.7560e-03 1.0000e+00 lowCoverage 1.5964e-01 1.0000e+00 lowCoverage 2.0415e-03 1.0000e+00 lowCoverage 0.510369 1.0000e+00 lowCoverage 0.3971871 1.5714e-02 lowCoverage 0.54251914 lowCoverage chr5 139264639 139265639 61502 NRG2 ENSG00000158458 0.018953 279 5 0.016673 170 10 0.054798 191 10 0.015733 215 6 0.014286 76 6 0.144020 278 8 0.043337 211 10 0.0022727 163 10 0.016667 125 5 0.0996667 97 4 0.076377 210 8 0.0379953 124 7 0.1260430 107 5 0.000000 15 2 0.0048309 142 5 0.0786287 119 5 0.035575 84 4 0.0530330 153 5 0.022839 149 8 0.045741 261 5 0.011111 76 5 0.037148 124 5 0.014978 140 8 0.0445232 121 10 0.011686 519 10 0.0090000 201 10 0.141026 131 8 0.023846 72 4 0.0206930 117 6 0.0096858 225 8 0.0069712 252 10 0.009526 269 5 0.0886954 157 10 0.120540 216 10 0.0000000 162 7 0.057573 287 10 0.031057 105 7 0.0365546 255 10 0.066548 297 5 0.028924 277 8 0.052917 226 6 0.0070423 356 5 0.082281 260 5 0.030967 0.033293 0.055954 0.0342074 0.0052138 0.027426 0.026844 0.009124 0.0310219 0.032092 0.013945 0.0490446 0.019474 0.019971 0.0174548 0.07321743 0.038615 0.052121 0.0200877 0.027028 0.015004 0.0461704 0.032320 0.060400 0.0049004 0.0091241 0.012072 0.042448 0.031603 0.0123242 0.011379 0.0096265 0.1216999 0.1845634 0.0777812 0.092233 0.019951 0.0454978 0.106986 0.0526316 0.037743 0.0077105 0.053400 4 0.034428 0.020917 0.01159058 6 0.038231 0.023023 0.0152077 0.1246358 5.0708e-02 insignificant 1.00000 1.0000e+00 insignificant 0.293860 6.9161e-01 insignificant 1 1.0000e+00 insignificant 0.0170240 0.240409 insignificant 1 insignificant 0.035027 0.0550381 -0.0490242 6 0.095361 0.0725308 0.0228307 5.2160e-01 8.6635e-06 weaklyHypometh 1.0000e+00 1.2376e-03 weaklyHypometh 6.3209e-01 1.0082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0103631 6.1689e-01 insignificant 1.0000e+00 insignificant 0.034428 0.050141 -0.0136828 5 0.038231 0.0438421 -0.0056111 3.5756e-01 4.8009e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.5345e-01 6.6546e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00216894 8.9680e-01 insignificant 1.0000e+00 insignificant 0.020917 0.0550847 -0.0480385 10 0.023023 0.0797839 -0.056761 6.0884e-01 4.4992e-05 weaklyHypometh 1.0000e+00 7.4987e-03 weaklyHypometh 8.3600e-01 1.2590e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0273871 2.1921e-01 insignificant 1.0000e+00 insignificant 0.020917 0.050141 -0.02168335 5 0.023023 0.0438421 -0.0208189 8.0031e-01 5.7280e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.6388e-01 0.20238820 insignificant 1.0000e+00 1.00000 insignificant -0.0191929 2.9207e-01 insignificant 1.0000000 insignificant 0.0550847 0.050141 0.0436993 5 0.0797839 0.0438421 0.0359418 1.3327e-01 9.7752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8240e-01 9.8477e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0081942 7.2047e-01 insignificant 1.00000000 insignificant chr5 139283783 139284783 61510 NRG2 ENSG00000158458 0.888502 237 5 0.846496 368 6 0.742857 55 4 0.962059 231 5 0.839838 99 7 0.927763 280 6 0.898305 122 7 0.8425932 165 4 0.882782 60 4 0.7458333 37 3 0.931432 319 7 0.9578112 46 2 0.9368984 91 4 0.962984 46 4 0.7827586 62 3 1.0000000 23 2 0.935213 1282 2 0.8539635 283 4 0.953759 200 4 0.936754 193 6 0.979167 21 3 0.931429 22 2 0.901948 118 5 0.7989744 51 5 0.819192 55 4 0.8925999 490 6 0.667409 96 4 0.500000 9 0 0.9619061 203 4 0.9380470 411 6 0.9594597 495 6 0.886527 233 6 0.0767882 229 7 0.155393 328 5 0.4285714 206 4 0.033333 23 3 0.199709 270 7 0.1316822 409 6 0.604766 369 6 0.728849 283 6 0.950493 620 5 0.8434454 83 4 0.903777 326 6 0.854209 0.934424 0.850000 0.9470707 0.8262729 0.937798 0.798694 0.939500 0.8194892 0.952536 0.945837 0.8817632 0.947569 0.877828 0.9402299 0.99739958 0.924096 0.885527 0.9580642 0.915648 0.930147 0.8294118 0.937427 0.775288 0.6836502 0.9331648 0.614059 0.894318 0.939620 0.9630616 0.962065 0.9509545 0.1553870 0.0554596 0.0127013 0.058780 0.040121 0.0801913 0.864077 0.8784979 0.891746 0.7700230 0.857346 2 0.907813 0.925590 -0.02554285 5 0.912165 0.878317 0.0338482 0.4234177 2.6041e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.666111 4.0803e-01 insignificant 1 1.0000e+00 insignificant 0.0383752 0.397988 lowCoverage 1 lowCoverage 0.907813 0.1004919 0.8185854 5 0.912165 0.1621653 0.7499995 1.9449e-74 1.0000e+00 hypermethylated 1.9449e-71 1.0000e+00 hypermethylated 1.0178e-16 1.0000e+00 hypermethylated 3.3928e-14 1.0000e+00 hypermethylated 0.7205171 2.1977e-05 lowCoverage 1.9979e-03 lowCoverage 0.907835 0.870910 0.0383779 5 0.920948 0.6740595 0.2468888 2.0886e-01 9.9253e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7603e-02 9.9985e-01 weaklyHypermeth 7.4604e-01 1.0000e+00 insignificant 0.08516380 2.5020e-01 lowCoverage 1.0000e+00 lowCoverage 0.925590 0.1004919 0.8281813 6 0.878317 0.1621653 0.716151 4.9285e-55 1.0000e+00 hypermethylated 4.9285e-52 1.0000e+00 hypermethylated 7.5798e-12 1.0000e+00 hypermethylated 1.8950e-09 1.00000000 hypermethylated 0.6821419 1.6351e-06 lowCoverage 1.8168e-04 lowCoverage 0.925590 0.870833 0.05765730 6 0.878317 0.6378439 0.2404727 4.8242e-04 9.9983e-01 weaklyHypermeth 1.5301e-02 1.00000000 weaklyHypermeth 1.2045e-02 0.99983011 weaklyHypermeth 3.6499e-01 1.00000 insignificant 0.0467886 5.4955e-01 lowCoverage 1.0000000 lowCoverage 0.1004919 0.870833 -0.7823525 6 0.1621653 0.6378439 -0.4756786 9.9992e-01 5.7042e-29 hypomethylated 1.0000e+00 1.9014e-26 hypomethylated 9.9998e-01 1.3234e-06 hypomethylated 1.000000 2.6468e-04 hypomethylated -0.6353533 4.5631e-05 hypomethylated 0.01140775 hypomethylated chr5 139502181 139503181 61545 C5orf53 ENSG00000182700 0.967828 136 2 0.834813 128 5 0.849206 76 5 0.960563 148 2 0.763636 52 2 0.935004 231 5 0.949377 109 5 0.8139758 116 5 0.872381 67 2 0.9723552 78 2 0.925784 262 5 0.8750000 19 2 0.8964177 108 2 0.983333 55 2 0.8681810 151 5 1.0000000 53 2 NA 0 0 0.7428571 70 2 0.919328 181 2 0.895290 127 5 0.366667 15 2 0.844615 29 2 0.941270 58 2 0.9000000 26 2 0.780303 23 2 0.8655514 167 5 0.710063 141 2 0.943464 84 4 0.9719821 125 2 0.9138589 147 5 0.9377778 120 5 0.954131 153 5 0.8888889 44 2 0.911765 34 2 0.8935333 256 2 1.000000 2 0 0.941906 79 5 0.7691429 142 5 0.856754 105 2 0.866154 96 2 0.980323 131 2 0.9425287 121 2 0.959900 43 2 0.919987 0.836435 0.836102 0.9023911 0.9069767 0.871237 0.872767 0.785381 0.8457364 0.930610 0.913905 0.6889535 0.864413 0.959302 0.9089646 1.00000000 NA 0.743522 0.9223666 0.867353 0.918605 0.8629696 0.851421 0.744186 0.7815363 0.8840706 0.775179 0.859895 0.930441 0.8515522 0.844444 0.8858149 0.9728682 0.9097127 0.7348140 1.000000 0.901571 0.7837209 0.857070 0.9158020 0.950825 0.8557872 0.899866 2 0.887863 0.869485 0.01978824 5 0.903858 0.894828 0.0090296 0.2614597 8.4179e-01 insignificant 1.00000 1.0000e+00 insignificant 0.446983 7.9540e-01 insignificant 1 1.0000e+00 insignificant 0.0519298 0.331886 lowCoverage 1 lowCoverage 0.887863 0.8078995 0.0803549 5 0.903858 0.8407195 0.0631385 1.6854e-03 9.0417e-01 weaklyHypermeth 2.5930e-02 1.0000e+00 weaklyHypermeth 6.6164e-01 2.4634e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048026 8.9527e-01 lowCoverage 1.0000e+00 lowCoverage 0.887863 0.897177 -0.0131896 2 0.903858 0.9137490 -0.0098910 8.5778e-01 4.0459e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6920e-01 1.8334e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02506169 4.3007e-01 lowCoverage 1.0000e+00 lowCoverage 0.869485 0.8078995 0.0595558 5 0.894828 0.8407195 0.054109 2.7732e-02 8.6514e-01 weaklyHypermeth 3.7989e-01 1.0000e+00 insignificant 8.6499e-01 2.9813e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0567324 3.4224e-01 lowCoverage 1.0000e+00 lowCoverage 0.869485 0.897177 -0.03600340 2 0.894828 0.9137490 -0.0189207 8.9253e-01 2.0169e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.9446e-01 0.12786444 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0769915 1.8175e-01 lowCoverage 1.0000000 lowCoverage 0.8078995 0.897177 -0.0980061 2 0.8407195 0.9137490 -0.0730295 9.9784e-01 6.7648e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1152e-01 6.4735e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0202591 6.2527e-01 lowCoverage 1.00000000 lowCoverage chr5 139921252 139922252 61569 SRA1 ENSG00000213523 0.933574 153 5 0.674011 174 6 0.730908 102 6 0.971331 118 5 0.943841 78 6 0.883559 141 5 0.832380 108 6 0.8017800 95 6 0.936706 99 6 0.9131653 78 6 0.893389 200 6 0.8701389 66 5 0.9324347 101 5 0.944444 13 1 0.8117725 89 6 0.9600000 38 4 0.871429 26 3 0.8137755 95 5 0.918818 198 6 0.936806 148 6 0.742965 78 6 0.814815 18 2 0.934935 118 5 0.9237904 106 6 0.952285 82 2 0.8343137 141 6 0.828704 83 5 0.950089 62 6 0.9231298 102 4 0.9083381 164 6 0.9222106 180 6 0.958520 180 6 0.8442545 120 6 0.754583 109 5 0.8333333 214 6 0.880952 24 3 0.870319 94 6 0.9337533 180 6 0.946038 150 5 0.948329 143 6 0.949571 95 4 0.9566154 121 5 0.952159 130 8 0.892154 0.768017 0.759380 0.9424710 0.9373133 0.854674 0.794225 0.759272 0.9492003 0.942139 0.839441 0.8698155 0.918537 0.880466 0.8023870 0.95027396 0.864810 0.784796 0.8948199 0.908609 0.819367 0.8456319 0.897765 0.925605 0.9476830 0.8113264 0.761026 0.906029 0.918376 0.8593801 0.928076 0.9251048 0.8770362 0.6620929 0.8854962 0.853435 0.812374 0.9068549 0.909287 0.9366517 0.944396 0.9374398 0.917546 2 0.872642 0.891172 -0.01696202 6 0.865453 0.806499 0.0589544 0.8544580 5.5873e-01 insignificant 1.00000 1.0000e+00 insignificant 0.889755 6.2875e-01 insignificant 1 1.0000e+00 insignificant -0.0124615 0.643758 insignificant 1 insignificant 0.872642 0.8596491 0.0287797 6 0.865453 0.9040466 -0.0385932 4.6629e-01 6.1257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4960e-01 7.1257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0258472 4.0932e-01 insignificant 1.0000e+00 insignificant 0.872993 0.931142 -0.0581540 5 0.911135 0.9571522 -0.0460173 9.9969e-01 1.9959e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9813e-01 3.1990e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.07182935 7.0688e-04 weaklyHypometh 7.8542e-02 weaklyHypometh 0.891172 0.8596491 0.0402080 6 0.806499 0.9040466 -0.097548 3.6510e-01 8.1536e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9163e-01 7.6763e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0383087 2.4661e-01 insignificant 1.0000e+00 insignificant 0.891851 0.931142 -0.03929730 5 0.907311 0.9571522 -0.0498409 9.8895e-01 8.2157e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8693e-01 0.15243744 insignificant 1.0000e+00 1.00000 insignificant -0.0593678 1.2299e-02 weaklyHypometh 0.6491323 insignificant 0.8594595 0.931142 -0.0793928 5 0.8920524 0.9571522 -0.0650999 9.8303e-01 3.0910e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8128e-01 4.9044e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0976765 1.0051e-02 weaklyHypometh 0.41880629 insignificant chr5 141055575 141056575 61587 ARAP3 ENSG00000120318 0.870988 274 5 0.724267 225 5 0.548208 99 5 0.886861 342 5 0.924370 53 4 0.710757 326 5 0.896362 86 4 0.8588571 99 5 0.852555 83 4 0.9199074 63 3 0.837331 212 5 0.8029412 48 3 0.8270737 83 3 0.921296 28 2 0.7921402 84 4 0.9273810 39 3 0.717025 331 4 0.6182424 228 5 0.892381 75 5 0.901951 232 5 0.754762 37 3 0.730133 62 3 0.856419 122 4 0.8990476 98 5 0.829706 49 4 0.8839225 193 5 0.541141 43 3 0.911876 61 4 0.7918301 81 4 0.9581452 221 5 0.9021750 208 5 0.837509 274 5 0.2543698 146 5 0.206897 49 3 0.5000000 77 2 0.200000 20 2 0.424190 174 5 0.2000000 243 5 0.744126 307 5 0.721986 301 5 0.829805 454 5 0.8234788 130 4 0.747859 395 5 0.863140 0.667602 0.616309 0.8773562 0.8883014 0.858764 0.875272 0.810808 0.8142393 0.914014 0.825316 0.8031780 0.861997 0.839582 0.8329396 0.86847913 0.707725 0.594797 0.8609216 0.881201 0.915730 0.7014601 0.859733 0.942215 0.7843688 0.8232766 0.781613 0.810715 0.825476 0.9321471 0.849918 0.8272955 0.1621977 0.0703216 0.1069107 0.056180 0.353631 0.0561798 0.720292 0.6957057 0.813677 0.7824565 0.731857 3 0.822259 0.857439 -0.03392436 5 0.692044 0.825974 -0.1339297 0.9846863 1.2095e-01 insignificant 1.00000 1.0000e+00 insignificant 0.885872 5.4586e-01 insignificant 1 1.0000e+00 insignificant -0.0031775 0.937592 lowCoverage 1 lowCoverage 0.822532 0.3117066 0.5933178 5 0.830453 0.2670832 0.5633698 1.8556e-38 7.4760e-01 hypermethylated 3.7112e-36 1.0000e+00 hypermethylated 1.1541e-09 8.5294e-01 hypermethylated 1.1924e-07 1.0000e+00 hypermethylated 0.5239686 4.0553e-05 lowCoverage 3.3794e-03 lowCoverage 0.822532 0.744171 0.0754223 5 0.830453 0.7702295 0.0602235 1.5588e-02 9.3984e-01 weaklyHypermeth 3.4640e-01 1.0000e+00 insignificant 4.5085e-03 9.9237e-01 weaklyHypermeth 1.7340e-01 1.0000e+00 insignificant 0.04809357 1.6184e-01 lowCoverage 1.0000e+00 lowCoverage 0.857836 0.3117066 0.5906829 5 0.857835 0.2670832 0.590752 1.6713e-32 7.9453e-01 hypermethylated 3.5878e-30 1.0000e+00 hypermethylated 2.6757e-08 8.6983e-01 hypermethylated 2.9730e-06 1.00000000 hypermethylated 0.5271461 1.7329e-05 lowCoverage 1.5754e-03 lowCoverage 0.857836 0.744171 0.09354978 5 0.857835 0.7702295 0.0876058 2.2715e-04 9.7468e-01 weaklyHypermeth 9.7228e-03 1.00000000 weaklyHypermeth 3.1715e-03 0.99528189 weaklyHypermeth 1.5102e-01 1.00000 insignificant 0.0512711 2.0990e-01 lowCoverage 1.0000000 lowCoverage 0.3117066 0.744171 -0.4653549 5 0.2670832 0.7702295 -0.5031463 8.9982e-01 1.5603e-16 hypomethylated 1.0000e+00 3.1206e-14 hypomethylated 9.5302e-01 7.6477e-06 hypomethylated 1.000000 1.0925e-03 hypomethylated -0.4758750 1.0528e-04 lowCoverage 0.02079654 lowCoverage chr5 141133636 141134636 61608 ARAP3 ENSG00000120318 0.815697 270 8 0.631330 180 8 0.720560 166 8 0.852711 200 8 0.790640 115 5 0.800937 301 8 0.862650 219 8 0.6461666 126 7 0.700297 146 6 0.6810125 108 8 0.871426 305 8 0.6775233 88 6 0.7075408 132 8 0.730159 63 3 0.6951377 169 8 0.8352453 93 5 0.843210 72 6 0.8663903 178 8 0.813442 247 8 0.744464 283 8 0.634388 98 6 0.650590 71 6 0.795535 161 8 0.7887464 80 7 0.687500 50 3 0.7860439 219 8 0.673179 124 7 0.751786 119 7 0.7741509 179 6 0.7334092 239 8 0.7644204 208 8 0.834432 393 8 0.3775300 176 8 0.522530 165 8 0.2037260 288 8 0.413919 55 6 0.507151 176 8 0.7647976 223 8 0.772717 301 8 0.806127 298 8 0.713811 155 8 0.8581747 301 8 0.781993 190 8 0.842440 0.675457 0.842383 0.8569548 0.7941342 0.871720 0.850130 0.653584 0.8375072 0.798394 0.888573 0.7959918 0.722235 0.741778 0.7514374 0.76300839 0.863734 0.836058 0.7915601 0.818460 0.808617 0.7910143 0.797924 0.878391 0.7191358 0.7723525 0.742029 0.840134 0.792932 0.7491465 0.760531 0.8695605 0.3909775 0.5583115 0.2893667 0.381843 0.550076 0.7990177 0.788771 0.8460081 0.745950 0.8638282 0.805046 5 0.813638 0.806801 0.00332426 8 0.644332 0.764762 -0.1204302 0.8156094 6.7938e-01 insignificant 1.00000 1.0000e+00 insignificant 0.903428 8.5270e-01 insignificant 1 1.0000e+00 insignificant 0.0248119 0.340362 insignificant 1 insignificant 0.813873 0.4986150 0.2842384 8 0.708765 0.4608835 0.2478814 1.9175e-19 1.0000e+00 hypermethylated 1.5980e-17 1.0000e+00 hypermethylated 8.1638e-09 1.0000e+00 hypermethylated 6.8031e-07 1.0000e+00 hypermethylated 0.2993847 9.9869e-03 weaklyHypermeth 2.9373e-01 insignificant 0.814108 0.812851 -0.0065649 8 0.787517 0.8118981 -0.0243815 6.6530e-01 5.3265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9636e-01 4.5810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02223734 4.6846e-01 insignificant 1.0000e+00 insignificant 0.807018 0.4986150 0.2793706 8 0.774571 0.4608835 0.313688 1.1564e-13 1.0000e+00 hypermethylated 7.2274e-12 1.0000e+00 hypermethylated 9.7555e-07 1.0000e+00 hypermethylated 6.0972e-05 1.00000000 hypermethylated 0.2745727 1.4224e-02 weaklyHypermeth 3.5561e-01 insignificant 0.807653 0.812851 -0.01187349 8 0.805079 0.8118981 -0.0068187 8.0082e-01 5.2478e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.1765e-01 0.61046456 insignificant 1.0000e+00 1.00000 insignificant -0.0470493 1.4862e-01 insignificant 1.0000000 insignificant 0.4990758 0.812851 -0.3046635 8 0.5120928 0.8118981 -0.2998053 1.0000e+00 2.8641e-08 hypomethylated 1.0000e+00 2.2032e-06 hypomethylated 1.0000e+00 5.5002e-06 hypomethylated 1.000000 9.1669e-04 hypomethylated -0.3216220 6.9598e-03 weaklyHypometh 0.33142000 insignificant chr5 141155038 141156038 61612 ARAP3 ENSG00000120318 0.906349 152 5 0.816713 103 5 0.798284 84 5 0.814588 150 5 0.741667 49 3 0.815127 256 5 0.813636 98 5 0.8921245 79 5 0.809124 98 5 0.8189542 45 3 0.822724 187 5 0.8825397 39 3 0.8276902 92 5 0.841880 38 3 0.8412500 86 5 0.8803030 39 3 0.694024 45 3 0.9165306 125 5 0.835648 149 5 0.854472 183 5 0.727613 59 5 0.711538 71 5 0.735693 89 5 0.7722748 64 5 0.917949 42 3 0.8091545 198 5 0.768276 62 5 0.864589 52 5 0.8050242 131 5 0.8283329 163 5 0.8375712 203 5 0.803247 294 5 0.6494141 127 5 0.599043 97 5 0.8460303 209 5 0.873333 38 3 0.677547 90 5 0.8398265 184 5 0.861214 142 5 0.850407 114 5 0.818324 110 5 0.8629787 127 5 0.870720 142 5 0.885546 0.764404 0.749289 0.7791904 0.7502159 0.796480 0.769744 0.872972 0.8099824 0.843510 0.796523 0.8383913 0.784408 0.786688 0.8171416 0.83337259 0.736952 0.892091 0.8205911 0.828856 0.748496 0.6716819 0.763853 0.820377 0.8917231 0.7841193 0.803916 0.855057 0.764211 0.8039169 0.844364 0.7915298 0.6519090 0.6024644 0.7961085 0.818653 0.662560 0.8228850 0.825652 0.8279610 0.817972 0.8369272 0.837343 3 0.836433 0.811625 0.02117773 5 0.834414 0.803539 0.0308758 0.0070703 9.3837e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.025399 8.3164e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0327430 0.131654 lowCoverage 1 lowCoverage 0.836433 0.7785235 0.0633458 5 0.834414 0.7767471 0.0576672 4.5874e-03 9.9553e-01 weaklyHypermeth 6.6485e-02 1.0000e+00 weaklyHypermeth 4.3508e-02 9.9000e-01 weaklyHypermeth 7.0174e-01 1.0000e+00 insignificant 0.0836489 1.4835e-01 lowCoverage 1.0000e+00 lowCoverage 0.836433 0.842520 -0.0221951 5 0.834414 0.8528376 -0.0184232 9.6329e-01 1.3717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2053e-01 9.4389e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02154748 1.6536e-01 lowCoverage 1.0000e+00 lowCoverage 0.811625 0.7785235 0.0389965 5 0.803539 0.7767471 0.026791 1.1913e-01 7.4179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2002e-01 8.1807e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0509060 3.5935e-01 lowCoverage 1.0000e+00 lowCoverage 0.811625 0.842520 -0.03884846 5 0.803539 0.8528376 -0.0492990 9.8785e-01 6.7246e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.3238e-01 0.02534955 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0542904 1.4261e-02 lowCoverage 0.7130452 lowCoverage 0.7785235 0.842520 -0.0855726 5 0.7767471 0.8528376 -0.0760905 9.7692e-01 4.5585e-02 weaklyHypometh 1.0000e+00 8.7663e-01 insignificant 9.9443e-01 2.5301e-02 weaklyHypometh 1.000000 7.2290e-01 insignificant -0.1051964 8.2694e-02 lowCoverage 1.00000000 lowCoverage chr5 141243283 141244283 61644 PCDH1 ENSG00000156453 0.213274 494 13 0.182520 831 14 0.235059 636 13 0.177384 398 12 0.147984 463 13 0.307759 781 13 0.275424 705 13 0.2063380 475 13 0.227300 558 11 0.2038880 509 13 0.266374 668 14 0.1848724 339 9 0.1937915 382 10 0.166569 336 12 0.1746890 632 13 0.1951142 479 11 0.399242 291 3 0.3459262 447 13 0.207075 672 13 0.195794 624 13 0.248008 201 11 0.141282 194 8 0.161609 359 13 0.2410759 436 13 0.185081 533 13 0.2161902 823 14 0.140036 582 12 0.155947 342 13 0.2285192 564 13 0.1729439 950 14 0.2118026 875 13 0.195407 540 13 0.1310149 479 13 0.157379 377 13 0.2820371 493 11 0.104974 304 8 0.185027 662 14 0.1891372 690 13 0.206676 491 13 0.264764 453 13 0.154949 397 13 0.1897433 287 13 0.236039 404 13 0.121586 0.077765 0.102574 0.0745907 0.0711858 0.140892 0.073314 0.063233 0.0958281 0.118147 0.106104 0.1062799 0.058128 0.075822 0.0782692 0.11176594 0.050018 0.100010 0.0449494 0.057406 0.075592 0.0817390 0.078899 0.078401 0.0619505 0.0657517 0.051167 0.058685 0.062869 0.0531118 0.065855 0.0763247 0.0578795 0.0288743 0.1233401 0.042718 0.053250 0.0928400 0.106836 0.1006023 0.074980 0.0796062 0.115825 9 0.112003 0.079075 0.02482578 13 0.308310 0.249492 0.0588178 0.0013359 9.6502e-01 weaklyHypermeth 0.44531 1.0000e+00 insignificant 0.089063 9.9555e-01 insignificant 1 1.0000e+00 insignificant 0.0338272 0.069958 insignificant 1 insignificant 0.112024 0.1178037 0.0150472 13 0.297474 0.1830327 0.1144416 1.0640e-05 2.9033e-02 weaklyHypermeth 2.3644e-04 1.0000e+00 weaklyHypermeth 5.1993e-04 8.9490e-01 weaklyHypermeth 1.4855e-02 1.0000e+00 weaklyHypermeth 0.0503907 1.1693e-01 insignificant 1.0000e+00 insignificant 0.110914 0.170768 -0.0169447 13 0.225521 0.2368151 -0.0112938 9.6137e-01 4.0901e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6744e-01 1.4823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01488489 5.4487e-01 insignificant 1.0000e+00 insignificant 0.079124 0.1178821 -0.0091150 13 0.288886 0.1926660 0.096220 3.0165e-02 1.9509e-01 inconclusive 4.0220e-01 1.0000e+00 insignificant 3.0185e-02 8.3168e-01 inconclusive 5.5897e-01 1.00000000 insignificant 0.0165634 5.6441e-01 insignificant 1.0000e+00 insignificant 0.078477 0.170768 -0.04393980 13 0.188144 0.2368151 -0.0486711 9.9994e-01 7.1299e-07 weaklyHypometh 1.0000e+00 0.00071299 weaklyHypometh 9.9881e-01 0.00084351 weaklyHypometh 1.0000e+00 0.46538 insignificant -0.0189423 4.1460e-01 insignificant 1.0000000 insignificant 0.1171562 0.170768 -0.0406700 13 0.1551547 0.2368151 -0.0816605 9.3327e-01 9.0761e-07 weaklyHypometh 1.0000e+00 5.0423e-05 weaklyHypometh 9.9096e-01 2.6373e-04 weaklyHypometh 1.000000 1.9158e-02 weaklyHypometh -0.0355058 2.8833e-01 insignificant 1.00000000 insignificant chr5 141722256 141723256 61673 SPRY4 ENSG00000187678 0.614412 228 6 0.511665 140 8 0.547434 129 8 0.605192 141 6 0.923611 47 6 0.593650 175 7 0.633565 56 5 0.6332137 78 6 0.860823 58 5 0.7718434 73 6 0.886232 109 6 0.9305556 40 6 0.8576555 76 6 NA 0 0 0.8295455 92 6 0.8186813 69 6 0.672309 63 6 0.5908843 184 6 0.691667 80 6 0.715176 219 6 0.825000 38 3 0.944444 56 6 0.644714 121 8 0.9583333 20 1 0.968182 59 6 0.5639661 136 8 0.899267 31 2 1.000000 22 2 0.8743056 52 5 0.5670387 129 8 0.6172348 130 8 0.624579 242 6 0.5550009 108 8 0.760973 88 6 0.6644284 108 7 0.744048 43 5 0.769444 31 3 0.5700682 126 8 0.845164 201 6 0.631902 213 6 0.732832 159 6 0.7558171 192 6 0.759611 177 6 0.840880 0.709580 0.722887 0.8064129 0.8940972 0.813670 0.682022 0.682695 0.8639610 0.800442 0.904709 0.9259259 0.861736 NA 0.8673453 0.86920024 0.712095 0.802754 0.7537037 0.818623 0.852083 0.9398148 0.838184 0.937500 0.9661616 0.7776373 0.844933 1.000000 0.890162 0.7590443 0.803072 0.8312166 0.7751523 0.7301838 0.7810314 0.680060 0.801852 0.7910808 0.847184 0.8659698 0.866549 0.8929793 0.879044 3 0.750122 0.740347 -0.03581046 6 0.612798 0.644530 -0.0317317 0.9539855 9.8689e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.991189 8.7026e-04 weaklyHypometh 1 2.9009e-01 insignificant -0.0701617 0.245451 insignificant 1 insignificant 0.750122 0.6686508 0.0333133 6 0.612798 0.5782945 0.0345036 4.5381e-02 9.3142e-01 weaklyHypermeth 5.7444e-01 1.0000e+00 insignificant 1.1373e-01 9.7747e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0431001 4.0611e-01 insignificant 1.0000e+00 insignificant 0.750122 0.858811 -0.0710589 6 0.612798 0.6465193 -0.0337211 8.7191e-01 1.0080e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5734e-01 1.1540e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02463835 6.0236e-01 insignificant 1.0000e+00 insignificant 0.740347 0.6686508 0.0687712 6 0.644530 0.5782945 0.066235 5.0474e-03 9.9998e-01 weaklyHypermeth 7.7653e-02 1.0000e+00 weaklyHypermeth 8.7368e-04 1.0000e+00 weaklyHypermeth 2.3613e-02 1.00000000 weaklyHypermeth 0.1132617 9.3940e-02 insignificant 1.0000e+00 insignificant 0.740347 0.858811 -0.02343464 6 0.644530 0.6465193 -0.0019894 9.0566e-01 4.8176e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.2666e-01 0.98772850 insignificant 1.0000e+00 1.00000 insignificant 0.0455233 4.6271e-01 insignificant 1.0000000 insignificant 0.6686508 0.858811 -0.0928346 6 0.5782945 0.6465193 -0.0682247 1.0000e+00 4.0974e-03 weaklyHypometh 1.0000e+00 1.0783e-01 insignificant 1.0000e+00 4.3692e-03 weaklyHypometh 1.000000 1.8997e-01 insignificant -0.0677384 2.2612e-01 insignificant 1.00000000 insignificant chr5 141801552 141802552 61685 SPRY4 ENSG00000187678 0.951667 86 5 0.879578 54 2 0.890443 85 5 0.981818 56 5 0.934706 55 5 0.953247 110 5 0.951023 95 5 0.9324415 99 5 0.887252 107 5 0.9708995 79 5 0.949902 106 5 0.9711111 69 2 0.9646377 111 5 0.750000 12 0 0.8929412 95 5 0.9867521 68 2 0.964286 54 2 0.9380952 28 4 0.966667 41 2 0.927961 102 5 1.000000 30 2 0.971429 44 4 0.912206 80 5 0.8772727 37 2 1.000000 16 1 0.9350649 107 5 0.942857 37 5 0.894286 46 5 0.8257143 44 5 0.9533083 125 5 0.9595960 98 5 0.984615 163 5 0.7661905 121 5 0.961667 34 2 1.0000000 11 1 0.933333 7 0 0.964444 101 5 0.9603297 75 5 1.000000 34 2 1.000000 48 5 1.000000 23 4 0.9492063 34 5 0.933333 14 1 0.966418 0.897587 0.838030 0.9864315 0.8953029 0.935130 0.951414 0.926072 0.8404832 0.982548 0.970325 0.9660033 0.959929 0.858533 0.8658765 0.97576221 0.937811 0.900498 0.9502488 0.926791 1.000000 0.9253731 0.872366 0.935489 1.0000000 0.9402662 0.904051 0.883795 0.867164 0.9291347 0.935926 0.9915806 0.6965885 0.9465174 0.9912449 0.825871 0.948590 0.9605954 1.000000 1.0000000 1.000000 0.9087894 0.970149 1 0.929233 0.943168 -0.00857536 5 0.937758 0.946358 -0.0085998 0.8694367 3.1474e-01 insignificant 1.00000 1.0000e+00 insignificant 0.871094 4.0068e-01 insignificant 1 1.0000e+00 insignificant -0.0057577 0.768885 lowCoverage 1 lowCoverage 0.929233 0.8796562 0.0526050 5 0.937758 0.8932015 0.0445567 1.4427e-02 8.5662e-01 weaklyHypermeth 1.9763e-01 1.0000e+00 insignificant 7.6532e-01 3.0402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0012773 9.7289e-01 lowCoverage 1.0000e+00 lowCoverage 0.929233 0.980392 -0.0484996 3 0.937758 0.9817698 -0.0440116 9.9961e-01 3.2774e-03 lowCoverage 1.0000e+00 6.5548e-01 lowCoverage 9.9994e-01 1.4702e-03 lowCoverage 1.0000e+00 2.9403e-01 lowCoverage -0.04423652 4.0683e-02 lowCoverage 1.0000e+00 lowCoverage 0.943168 0.8796562 0.0614070 5 0.946358 0.8932015 0.053157 2.0411e-02 8.3428e-01 weaklyHypermeth 2.9581e-01 1.0000e+00 insignificant 7.2201e-01 4.8122e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0070350 8.5581e-01 lowCoverage 1.0000e+00 lowCoverage 0.943168 0.980392 -0.04012494 3 0.946358 0.9817698 -0.0354118 9.9170e-01 2.1000e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.9931e-01 0.01468643 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0384789 9.2733e-02 lowCoverage 1.0000000 lowCoverage 0.8796562 0.980392 -0.1022700 3 0.8932015 0.9817698 -0.0885683 9.9989e-01 1.6094e-02 lowCoverage 1.0000e+00 3.7429e-01 lowCoverage 9.9972e-01 8.7052e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0455138 2.6089e-01 lowCoverage 1.00000000 lowCoverage chr5 143565226 143566226 61784 YIPF5 ENSG00000145817 0.023810 29 4 0.011569 142 6 0.045420 207 6 0.000000 12 0 0.047027 68 3 0.046296 60 6 0.038838 97 3 0.0256410 28 3 0.013889 49 3 0.0000000 46 3 0.030423 108 3 0.0404762 123 3 0.0234848 81 3 NA 0 0 0.0426487 96 3 0.0383772 76 3 0.108669 43 3 0.0000000 17 0 0.021463 84 3 0.000000 42 6 0.055556 14 2 0.000000 2 0 0.055083 112 6 0.0476190 39 3 NA 0 0 0.0258488 184 6 0.000000 6 0 0.000000 10 0 0.0000000 16 2 0.0083333 159 6 0.0270834 206 6 0.020833 72 6 0.0072464 118 6 0.000000 69 3 0.0086207 113 4 0.000000 4 0 0.000000 6 0 0.0050505 115 6 0.033333 22 2 0.000000 23 2 0.000000 21 1 0.0000000 6 0 0.000000 18 0 0.034014 0.023529 0.019841 0.0000000 0.0440725 0.079365 0.032807 0.036630 0.0198413 0.000000 0.030234 0.0408163 0.024892 NA 0.0322270 0.03994361 0.100297 0.000000 0.0230430 0.000000 0.079365 0.0056254 0.070487 0.034014 NA 0.0354938 0.000000 0.000000 0.000000 0.0238095 0.023497 0.0000000 0.0207039 0.0000000 0.0070268 0.000000 0.000000 0.0144300 0.057143 0.0000000 0.000000 0.0000000 0.000000 0 0.033381 0.024390 0.01181204 3 0.032052 0.024689 0.0073630 0.1805752 3.0436e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.486229 2.3092e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0075196 0.409701 lowCoverage 1 lowCoverage 0.033381 0.0070588 0.0285558 3 0.032052 0.0061129 0.0259390 9.3521e-03 9.9540e-01 lowCoverage 1.3360e-01 1.0000e+00 lowCoverage 7.0338e-02 9.7844e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0258839 3.7380e-04 lowCoverage 2.0767e-02 lowCoverage 0.033381 0.011111 0.0195355 0 0.032052 0.0092593 0.0227927 5.8597e-04 8.6157e-01 noCoverage 1.8312e-02 1.0000e+00 noCoverage 1.7966e-02 9.9703e-01 noCoverage 5.1330e-01 1.0000e+00 noCoverage 0.02270349 2.6486e-02 lowCoverage 1.0000e+00 lowCoverage 0.024390 0.0070588 0.0174460 6 0.024689 0.0061129 0.018576 2.1400e-02 9.8288e-01 weaklyHypermeth 3.0397e-01 1.0000e+00 insignificant 7.7114e-02 9.9583e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0183643 2.2916e-02 lowCoverage 5.0924e-01 lowCoverage 0.024390 0.011111 0.01481138 0 0.024689 0.0092593 0.0154297 1.6619e-02 9.8203e-01 noCoverage 3.6129e-01 1.00000000 noCoverage 2.2139e-02 0.99931454 noCoverage 6.3254e-01 1.00000 noCoverage 0.0151839 1.3694e-01 lowCoverage 1.0000000 lowCoverage 0.0070588 0.011111 -0.0034137 0 0.0061129 0.0092593 -0.0031463 4.1328e-01 9.7501e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 7.5711e-01 9.9240e-01 noCoverage 1.000000 1.0000e+00 noCoverage -0.0031804 6.6468e-01 lowCoverage 1.00000000 lowCoverage chr5 145296972 145297972 61934 SH3RF2 ENSG00000156463 0.474838 321 10 0.262698 351 10 0.393722 170 10 0.566870 256 8 0.308911 112 6 0.684270 294 10 0.423599 162 9 0.3760653 230 9 0.347834 267 9 0.5294784 170 7 0.530106 348 10 0.2182984 133 7 0.2644008 321 9 0.435606 48 5 0.4001457 187 9 0.1169591 67 4 0.362714 101 7 0.4631850 271 4 0.271182 172 9 0.566087 261 10 0.683070 88 9 0.719640 74 5 0.633599 217 10 0.6715018 92 9 0.576496 264 6 0.5043691 334 10 0.264820 129 8 0.432099 58 5 0.4222737 229 9 0.6732947 325 10 0.6358805 338 10 0.567649 312 10 0.7117102 224 7 0.836505 230 10 0.7837032 184 10 0.670370 75 4 0.853609 115 7 0.7500942 388 10 0.659483 229 10 0.609672 315 10 0.547349 264 9 0.4035414 215 9 0.718287 228 6 0.502589 0.302063 0.376301 0.5768449 0.2714772 0.676556 0.425590 0.394542 0.3598635 0.496438 0.555803 0.2110469 0.268178 0.513390 0.4127978 0.13268880 0.330441 0.499894 0.3585526 0.576492 0.813443 0.7111946 0.695255 0.648066 0.5963387 0.4836534 0.303964 0.557379 0.527895 0.6682103 0.692211 0.6024817 0.7013964 0.7920785 0.7153496 0.554193 0.889438 0.6096398 0.668601 0.5772884 0.545869 0.4567758 0.702232 4 0.452381 0.563415 -0.16890121 10 0.412619 0.571435 -0.1588160 1.0000000 1.7409e-13 weaklyHypometh 1.00000 1.7409e-10 weaklyHypometh 0.999997 3.5686e-11 weaklyHypometh 1 3.5686e-08 weaklyHypometh -0.1655424 0.002910 weaklyHypometh 1 insignificant 0.452381 0.7146382 -0.2735746 10 0.412619 0.7982881 -0.3856693 9.9989e-01 1.5739e-36 hypomethylated 1.0000e+00 1.5739e-33 hypomethylated 9.9999e-01 7.3458e-14 hypomethylated 1.0000e+00 7.3458e-11 hypomethylated -0.3678167 1.1934e-07 hypomethylated 1.3260e-05 hypomethylated 0.452381 0.612310 -0.1526771 10 0.412619 0.5945775 -0.1819587 1.0000e+00 6.0956e-10 weaklyHypometh 1.0000e+00 6.0956e-07 weaklyHypometh 1.0000e+00 9.9356e-08 weaklyHypometh 1.0000e+00 9.9356e-05 weaklyHypometh -0.18781782 1.9720e-02 weaklyHypometh 8.9635e-01 insignificant 0.563415 0.7146382 -0.1723736 10 0.571435 0.7982881 -0.226853 8.4223e-01 2.0525e-17 weaklyHypometh 1.0000e+00 2.0525e-14 weaklyHypometh 9.6471e-01 1.0653e-06 weaklyHypometh 1.0000e+00 0.00053263 weaklyHypometh -0.2022743 7.6851e-04 hypomethylated 4.4922e-02 hypomethylated 0.563415 0.612310 0.00033176 10 0.571435 0.5945775 -0.0231427 5.4735e-01 6.3869e-02 insignificant 1.0000e+00 1.00000000 insignificant 5.2222e-01 0.12921225 insignificant 1.0000e+00 1.00000 insignificant -0.0222754 7.4646e-01 insignificant 1.0000000 insignificant 0.7146382 0.612310 0.1369064 10 0.7982881 0.5945775 0.2037106 5.6147e-09 9.4844e-01 weaklyHypermeth 2.8073e-06 1.0000e+00 weaklyHypermeth 1.2054e-03 9.6012e-01 weaklyHypermeth 0.401803 1.0000e+00 insignificant 0.1799989 2.4893e-02 weaklyHypermeth 0.74155924 insignificant chr5 145566338 145567338 61950 RBM27 ENSG00000091009 0.609404 327 7 0.580303 115 6 0.688565 58 5 0.594610 212 7 0.688776 54 6 0.506718 105 5 0.580415 68 6 0.6097231 104 7 0.732617 57 5 0.5670068 41 4 0.613902 174 7 0.4444444 16 0 0.6782028 96 7 0.552228 74 6 0.7837995 62 4 0.4583333 15 0 0.459491 76 3 0.6366088 291 7 0.641392 57 4 0.748265 97 5 0.532381 26 4 1.000000 5 0 0.637170 155 7 0.3476190 32 4 0.726054 77 3 0.5000000 120 7 0.671818 42 4 0.666667 16 2 0.6150794 101 6 0.5573927 113 7 0.5579499 90 5 0.641768 108 6 0.6449992 108 6 0.598680 83 6 0.5584436 112 6 0.574830 24 1 0.407904 90 5 0.4877193 91 5 0.651243 269 7 0.663756 302 7 0.678060 272 7 0.6822454 216 6 0.567969 219 7 0.639073 0.561555 0.638147 0.6423464 0.6986922 0.614085 0.638325 0.686050 0.7671962 0.620121 0.628667 0.5524964 0.679605 0.568737 0.7924423 0.54428047 0.589720 0.673281 0.6739617 0.764160 0.472034 0.9150920 0.684567 0.319718 0.6296982 0.6267606 0.647358 0.600538 0.670657 0.6273712 0.635180 0.6709854 0.7030498 0.6474587 0.6099623 0.638498 0.545490 0.5648134 0.695306 0.7100852 0.705919 0.7482525 0.613683 0 0.639828 0.675706 0.00395886 5 0.621409 0.599296 0.0221128 0.2592846 4.3096e-01 insignificant 1.00000 1.0000e+00 insignificant 0.426993 3.9297e-01 insignificant 1 1.0000e+00 insignificant -0.0124179 0.805772 lowCoverage 1 lowCoverage 0.639828 0.6220472 0.0282823 5 0.621409 0.5828897 0.0385195 2.2113e-02 3.8377e-01 weaklyHypermeth 2.9883e-01 1.0000e+00 insignificant 2.1935e-01 6.3362e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0633108 1.5380e-01 lowCoverage 1.0000e+00 lowCoverage 0.639828 0.655712 -0.0299026 7 0.621409 0.6462639 -0.0248548 9.4484e-01 1.6929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9458e-01 2.3753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03991432 2.0395e-01 insignificant 1.0000e+00 insignificant 0.675706 0.6220472 0.0383541 5 0.599296 0.5828897 0.016407 1.6977e-01 6.1139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3513e-01 8.8507e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0757288 2.0043e-01 lowCoverage 1.0000e+00 lowCoverage 0.675706 0.655712 -0.03557402 5 0.599296 0.6462639 -0.0469675 9.7792e-01 2.2746e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.6042e-01 0.34110729 insignificant 1.0000e+00 1.00000 insignificant -0.0274964 5.8683e-01 lowCoverage 1.0000000 lowCoverage 0.6220472 0.655712 -0.0668479 5 0.5828897 0.6462639 -0.0633742 9.2742e-01 1.1126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2985e-01 2.2243e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1032251 3.4208e-02 lowCoverage 0.92300521 lowCoverage chr5 149100452 149101452 62141 MIR378 ENSG00000199047 0.78507 152 6 0.68118 241 6 0.68862 99 8 0.89568 86 6 0.68303 95 6 0.83359 217 6 0.71705 52 5 0.60999 200 6 0.55777 94 8 0.84231 88 8 0.63910 369 8 0.62963 33 4 0.78415 233 8 0.77590 61 5 0.80038 104 6 0.48889 33 3 0.51667 33 2 0.58600 174 6 0.77754 451 8 0.89635 273 6 0.59719 131 6 0.59174 92 5 0.78915 145 8 0.54060 60 3 0.86796 48 5 0.78874 356 6 0.79882 192 6 0.43939 30 2 0.74217 352 8 0.81870 306 6 0.69318 307 6 0.76715 302 6 0.419920 228 6 0.29348 306 6 0.35356 165 3 0.31250 43 5 0.44983 138 7 0.56880 418 6 0.41854 170 6 0.64125 201 6 0.64915 89 6 0.68805 96 5 0.58090 117 6 0.86772 0.76355 0.79446 0.86999 0.74566 0.83550 0.81704 0.86701 0.77059 0.94021 0.89977 0.92431 0.90496 0.89908 0.87306 0.80024 0.76784 0.79734 0.89991 0.89883 0.88427 0.62244 0.88797 0.88985 0.87066 0.89015 0.78753 0.70979 0.84402 0.92544 0.89673 0.86758 0.41783 0.34852 0.43320 0.26340 0.50796 0.53470 0.58229 0.69188 0.72234 0.73218 0.57715 1 0.80117 0.83714 -0.0087199 6 0.66669 0.57249 0.09419725 0.60231 0.480479 insignificant 1 1 insignificant 0.84132 0.75311 insignificant 1 1 insignificant 0.0065440 0.88958 insignificant 1 insignificant 0.80117 0.44684 0.384497 6 0.66669 0.39424 0.272442 9.2718e-24 9.9992e-01 hypermethylated 1.8544e-21 1.00000000 hypermethylated 2.1824e-09 0.9847383 hypermethylated 4.3649e-07 1.00000 hypermethylated 0.309763 1.1754e-04 hypermethylated 0.01305979 hypermethylated 0.80110 0.61813 0.231493 6 0.63638 0.46523 0.1711512 3.2307e-15 0.99999 hypermethylated 3.2307e-12 1 hypermethylated 4.2380e-05 0.99849 hypermethylated 8.4760e-03 1 hypermethylated 0.113869 0.076403 insignificant 1 insignificant 0.83714 0.44684 0.393064 6 0.57249 0.39424 0.178245 4.2421e-19 9.6578e-01 hypermethylated 1.0605e-16 1.0000000 hypermethylated 9.2552e-08 0.98405472 hypermethylated 2.9612e-05 1.00000 hypermethylated 0.303219 1.3857e-04 hypermethylated 0.013857 hypermethylated 0.83815 0.61813 0.2387842 6 0.60181 0.46523 0.1365724 1.0116e-13 0.99044 hypermethylated 1.0116e-10 1 hypermethylated 3.0035e-05 0.98042 hypermethylated 0.0100118 1 hypermethylated 0.1073248 0.1098436 insignificant 1 insignificant 0.44753 0.61813 -0.157960 6 0.43008 0.46523 -0.035149 9.8050e-01 4.0112e-03 weaklyHypometh 1.0000e+00 1.9101e-01 insignificant 0.9996451 7.0530e-03 weaklyHypometh 1.00000 0.503786 insignificant -0.195894 0.01368061 weaklyHypometh 0.651458 insignificant chr5 149441103 149442103 62155 ENSG00000208633 0.61908 245 7 0.38179 403 7 0.52662 307 7 0.58395 196 7 0.45701 160 7 0.66103 543 7 0.53261 275 7 0.54167 232 7 0.50950 233 7 0.67159 159 7 0.59166 362 7 0.60009 110 7 0.43120 242 7 0.54722 167 7 0.46600 262 7 0.58366 85 7 0.91667 9 1 0.33326 431 7 0.50731 446 7 0.40114 375 7 0.55876 184 7 0.20102 43 2 0.55681 312 7 0.52382 184 7 0.51190 32 2 0.44995 420 7 0.39917 325 7 0.67056 145 7 0.45998 411 7 0.41330 497 7 0.39440 482 7 0.72791 432 7 0.079606 383 7 0.07333 381 6 0.17188 54 3 0.16667 4 0 0.24050 306 7 0.26359 519 7 0.45580 448 7 0.52973 246 7 0.40734 183 6 0.32394 368 7 0.41419 263 7 0.62107 0.51603 0.54566 0.57539 0.51505 0.71209 0.57666 0.62031 0.56037 0.72587 0.65552 0.63983 0.44188 0.60442 0.52742 0.57166 0.65867 0.41347 0.58840 0.44968 0.63005 0.33122 0.61790 0.55888 0.50391 0.59369 0.49819 0.71770 0.52035 0.46023 0.44202 0.76383 0.11894 0.11473 0.32204 0.20547 0.27091 0.21056 0.47615 0.47755 0.40498 0.37038 0.43615 3 0.55609 0.52408 0.0211878 7 0.54989 0.46912 0.08076768 0.50141 0.949199 insignificant 1 1 insignificant 0.38577 0.98065 insignificant 1 1 insignificant 0.0541872 0.27928 insignificant 1 insignificant 0.55613 0.17668 0.378879 7 0.51653 0.17814 0.338389 3.7490e-28 1.0000e+00 hypermethylated 9.3724e-26 1.00000000 hypermethylated 5.5541e-13 0.9999996 hypermethylated 5.5541e-10 1.00000 hypermethylated 0.377227 5.7147e-07 hypermethylated 0.00014287 hypermethylated 0.55621 0.44496 0.123112 7 0.57696 0.48264 0.0943195 7.7338e-06 0.99938 weaklyHypermeth 1.2890e-03 1 weaklyHypermeth 1.4321e-06 0.99969 weaklyHypermeth 6.2957e-04 1 weaklyHypermeth 0.116955 0.022706 weaklyHypermeth 1 insignificant 0.52397 0.17668 0.348098 7 0.49601 0.17814 0.317878 4.5761e-17 9.9987e-01 hypermethylated 9.1522e-15 1.0000000 hypermethylated 1.2103e-08 0.99999125 hypermethylated 6.0517e-06 1.00000 hypermethylated 0.323040 1.2108e-05 hypermethylated 0.003027 hypermethylated 0.52382 0.44496 0.1006846 7 0.43401 0.48264 -0.0486275 1.2972e-03 0.99216 weaklyHypermeth 1.1793e-01 1 insignificant 4.2287e-03 0.98105 weaklyHypermeth 0.3844299 1 insignificant 0.0627677 0.2489224 insignificant 1 insignificant 0.17668 0.44459 -0.259410 7 0.17814 0.40873 -0.230595 9.7967e-01 3.6210e-09 hypomethylated 1.0000e+00 6.0349e-07 hypomethylated 0.9944723 3.6068e-05 hypomethylated 1.00000 0.009017 hypomethylated -0.260272 0.00036704 hypomethylated 0.073409 hypomethylated chr5 149506575 149507575 62161 CSF1R ENSG00000182578 0.86270 223 7 0.66754 152 8 0.73095 86 6 0.76935 200 6 0.63750 45 5 0.72807 185 8 0.69259 73 7 0.71734 156 8 0.80208 52 6 0.84375 56 5 0.78319 245 8 0.69722 44 4 0.82993 118 7 0.81563 67 7 0.71138 79 4 0.66667 3 0 0.75000 10 0 0.71833 478 7 0.82389 263 8 0.71386 202 7 0.78125 43 4 0.62308 49 4 0.75316 112 8 0.84694 35 4 0.80397 105 7 0.93225 234 8 0.72659 108 8 0.90754 42 4 0.60398 231 8 0.79947 267 8 0.69590 238 8 0.74991 177 8 0.512871 116 7 0.68550 154 7 0.50000 14 1 0.47500 13 1 0.54106 123 7 0.43288 243 8 0.43420 186 8 0.53606 230 8 0.58948 240 8 0.71912 157 7 0.47095 203 8 0.80557 0.70118 0.74021 0.89341 0.78333 0.76318 0.70916 0.76032 0.87963 0.82500 0.76373 0.74691 0.90024 0.86111 0.69255 0.60569 0.68891 0.69282 0.84687 0.84022 0.75926 0.59544 0.84736 0.79365 0.90670 0.95310 0.78423 0.88519 0.59033 0.76890 0.73773 0.81547 0.54399 0.67803 NA 0.48577 0.57459 0.38931 0.48231 0.54962 0.65172 0.78191 0.51779 0 0.78151 0.81159 -0.0265081 8 0.75455 0.77494 -0.02038521 0.47265 0.177178 insignificant 1 1 insignificant 0.41463 0.37315 insignificant 1 1 insignificant -0.0205701 0.53373 insignificant 1 insignificant 0.78151 0.56109 0.221266 8 0.75455 0.54601 0.208537 1.0616e-11 1.0000e+00 hypermethylated 9.6509e-10 1.00000000 hypermethylated 1.4875e-05 0.9999996 hypermethylated 1.3522e-03 1.00000 hypermethylated 0.223548 7.2956e-04 hypermethylated 0.05211145 hypermethylated 0.78151 0.60925 0.153275 8 0.75455 0.52540 0.2291513 3.1129e-14 1.00000 weaklyHypermeth 1.5564e-11 1 weaklyHypermeth 5.6377e-08 1.00000 weaklyHypermeth 5.6377e-05 1 weaklyHypermeth 0.198138 0.014134 weaklyHypermeth 1 insignificant 0.81159 0.56109 0.247676 8 0.77494 0.54601 0.228922 7.6940e-08 1.0000e+00 hypermethylated 5.4957e-06 1.0000000 hypermethylated 2.4336e-04 0.99999269 hypermethylated 1.7901e-02 1.00000 hypermethylated 0.244118 2.0426e-04 hypermethylated 0.017021 hypermethylated 0.81159 0.60925 0.1889380 8 0.77494 0.52540 0.2495365 1.5092e-10 1.00000 weaklyHypermeth 7.5459e-08 1 weaklyHypermeth 1.1810e-06 1.00000 weaklyHypermeth 0.0011810 1 weaklyHypermeth 0.2187083 0.0071293 weaklyHypermeth 1 insignificant 0.56109 0.60925 -0.055943 8 0.54601 0.52540 0.020615 2.7125e-01 2.0545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.8590810 1.7561e-01 insignificant 1.00000 1.000000 insignificant -0.025410 0.69015386 insignificant 1.000000 insignificant chr5 150597809 150598809 62195 CCDC69 ENSG00000198624 0.70718 196 6 0.54541 230 8 0.59706 190 8 0.77433 220 7 0.59111 170 8 0.60588 314 8 0.67062 122 8 0.58344 283 8 0.60317 127 8 0.61055 169 8 0.68889 312 8 0.58114 78 4 0.66551 235 8 0.73096 147 8 0.66033 211 6 0.26923 51 4 0.50000 16 1 0.76178 289 6 0.65949 215 7 0.81710 286 6 0.66593 122 6 0.65218 89 8 0.64206 157 8 0.58318 134 8 0.61752 52 4 0.66115 297 8 0.57733 232 8 0.81384 82 8 0.59526 262 8 0.68728 333 8 0.61257 284 8 0.65874 368 8 0.433504 276 8 0.51594 173 7 0.78815 426 6 0.56667 23 3 0.48208 169 8 0.32965 332 8 0.69067 226 9 0.59953 195 6 0.43934 132 6 0.55678 131 6 0.63832 124 7 0.65642 0.39193 0.66569 0.78393 0.59974 0.63721 0.74344 0.63064 0.59855 0.79574 0.70149 0.76050 0.73268 0.72295 0.71337 0.39841 0.62480 0.54735 0.79492 0.71782 0.67758 0.72822 0.69749 0.69746 0.63677 0.61989 0.54930 0.80931 0.64945 0.77957 0.62079 0.61965 0.32581 0.71695 0.70190 0.36272 0.40783 0.24596 0.75729 0.69899 0.55929 0.45017 0.51091 4 0.69567 0.68740 0.0107299 8 0.61120 0.59288 0.01831999 0.67893 0.453511 insignificant 1 1 insignificant 0.70374 0.69016 insignificant 1 1 insignificant -0.0160968 0.61760 insignificant 1 insignificant 0.69567 0.50893 0.136974 8 0.61120 0.55996 0.051238 3.3891e-03 9.3832e-01 weaklyHypermeth 1.0933e-01 1.00000000 insignificant 1.3859e-02 0.9588260 weaklyHypermeth 5.3303e-01 1.00000 insignificant 0.111827 1.4655e-01 insignificant 1.00000000 insignificant 0.69578 0.65965 0.024110 6 0.62355 0.61239 0.0111679 1.9342e-01 0.44371 insignificant 1.0000e+00 1 insignificant 1.4543e-01 0.91192 insignificant 1.0000e+00 1 insignificant 0.046232 0.384157 insignificant 1 insignificant 0.68740 0.50893 0.121282 8 0.59288 0.55996 0.032918 1.3676e-02 9.8002e-01 weaklyHypermeth 3.5379e-01 1.0000000 insignificant 2.9194e-03 0.97069971 weaklyHypermeth 1.3902e-01 1.00000 insignificant 0.127924 1.0039e-01 insignificant 1.000000 insignificant 0.68812 0.65965 0.0105908 6 0.63098 0.61239 0.0185901 3.1427e-01 0.67640 insignificant 1.0000e+00 1 insignificant 1.0117e-01 0.96514 insignificant 1.0000000 1 insignificant 0.0623290 0.2307848 insignificant 1 insignificant 0.50858 0.65965 -0.113218 6 0.51107 0.61239 -0.101318 9.7918e-01 1.5726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9781175 1.4432e-01 insignificant 1.00000 1.000000 insignificant -0.065595 0.41243735 insignificant 1.000000 insignificant chr5 157220815 157221815 62571 CLINT1 ENSG00000113282 0.66429 411 9 0.60812 155 10 0.61226 164 8 0.73450 285 10 0.70798 134 8 0.67483 431 10 0.62640 201 8 0.64158 163 10 0.48976 221 8 0.71783 144 8 0.64727 300 10 0.63947 104 8 0.71622 189 9 0.66319 66 8 0.75405 164 8 0.57119 97 8 0.67367 105 5 0.64767 298 10 0.73247 185 8 0.62929 308 10 0.74863 80 7 0.55750 70 7 0.59644 228 9 0.55953 108 8 0.64052 119 7 0.65812 271 10 0.86944 38 3 0.67188 51 6 0.68210 221 9 0.67085 267 10 0.66691 246 10 0.62831 430 10 0.635882 132 10 0.54677 164 6 0.69536 108 9 0.60606 56 5 0.62230 138 8 0.64574 246 10 0.65049 353 10 0.68032 257 10 0.78905 228 6 0.62105 322 9 0.65907 257 10 0.64997 0.57163 0.57713 0.67756 0.63117 0.66673 0.66598 0.58120 0.61119 0.62109 0.60351 0.63549 0.66854 0.66018 0.72384 0.57768 0.62036 0.62347 0.70799 0.60629 0.65533 0.56355 0.61084 0.61072 0.56675 0.62575 0.81523 0.68900 0.63321 0.62513 0.63872 0.66068 0.58227 0.54361 0.72737 0.57890 0.60016 0.62041 0.65615 0.68851 0.70993 0.63072 0.62828 6 0.63176 0.64521 0.0027904 10 0.66737 0.66807 -0.00069468 0.58696 0.669874 insignificant 1 1 insignificant 0.45667 0.52578 insignificant 1 1 insignificant -0.0049175 0.86292 insignificant 1 insignificant 0.63176 0.63183 0.031426 9 0.66737 0.64625 0.021122 2.7926e-02 8.2435e-01 weaklyHypermeth 7.1605e-01 1.00000000 insignificant 1.1432e-01 0.9614009 insignificant 1.0000e+00 1.00000 insignificant 0.032247 2.1403e-01 insignificant 1.00000000 insignificant 0.63176 0.63373 -0.020441 10 0.66737 0.66474 0.0026311 6.3198e-01 0.27225 insignificant 1.0000e+00 1 insignificant 5.1395e-01 0.18661 insignificant 1.0000e+00 1 insignificant -0.022396 0.510963 insignificant 1 insignificant 0.64521 0.63183 0.027708 9 0.66807 0.64625 0.021816 1.0941e-01 9.3041e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.1041e-01 0.99478790 insignificant 1.0000e+00 1.00000 insignificant 0.037165 2.5634e-01 insignificant 1.000000 insignificant 0.64521 0.63373 -0.0208895 10 0.66807 0.66474 0.0033258 6.0373e-01 0.23161 insignificant 1.0000e+00 1 insignificant 8.8962e-01 0.32966 insignificant 1.0000000 1 insignificant -0.0174781 0.6537350 insignificant 1 insignificant 0.63183 0.63373 -0.042572 9 0.64625 0.66474 -0.018491 9.4158e-01 6.2860e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9964548 8.1011e-02 insignificant 1.00000 1.000000 insignificant -0.054643 0.16140841 insignificant 1.000000 insignificant chr5 157285760 157286760 62574 CLINT1 ENSG00000113282 0.88974 114 3 0.62149 280 5 0.58889 30 4 0.82659 178 5 0.57959 62 5 0.69107 205 4 0.68503 59 5 0.65412 74 5 0.79818 33 4 0.75000 14 1 0.82580 245 6 0.79167 16 0 0.46389 15 1 0.87500 21 2 0.83333 14 1 0.50000 4 0 NA 0 0 0.69825 217 4 0.62740 65 4 0.77555 132 4 0.47455 33 4 0.40000 8 0 0.80508 76 4 0.87500 39 3 0.76527 120 5 0.80709 204 5 0.63770 38 3 0.00000 4 0 0.74204 65 4 0.75175 214 5 0.77129 305 6 0.85601 156 4 0.789560 122 5 0.85813 78 5 0.75000 84 2 0.85754 144 5 0.89709 89 5 0.95986 251 6 0.79538 104 3 0.54727 153 5 0.67182 177 5 0.63675 25 3 0.68567 169 6 0.83739 0.58582 0.55401 0.67191 0.26111 0.74296 0.55138 0.51419 0.57677 0.54861 0.73386 0.61111 0.24074 0.89583 0.79167 0.44444 NA 0.59069 0.62882 0.68190 0.46364 0.44444 0.74600 0.68519 0.70926 0.73450 0.54018 0.00000 0.61267 0.63807 0.66474 0.84975 0.74814 0.85136 0.52510 0.79355 0.83184 0.93490 0.66353 0.47212 0.51469 0.54131 0.56198 0 0.69322 0.74245 -0.0311059 5 0.74234 0.77585 -0.03350572 0.87926 0.077015 insignificant 1 1 insignificant 0.54505 0.77616 insignificant 1 1 insignificant 0.0520945 0.51680 lowCoverage 1 lowCoverage 0.69322 0.88411 -0.179266 6 0.74234 0.90614 -0.163800 9.9999e-01 2.1677e-06 weaklyHypometh 1.0000e+00 0.00030967 weaklyHypometh 9.9637e-01 0.0016238 weaklyHypometh 1.0000e+00 0.23197 insignificant -0.142789 4.0086e-03 lowCoverage 0.17428822 lowCoverage 0.69322 0.55414 0.100277 5 0.74234 0.66514 0.0772061 1.1625e-02 0.86935 weaklyHypermeth 6.6623e-01 1 insignificant 2.1284e-01 0.96770 insignificant 1.0000e+00 1 insignificant 0.041862 0.417552 lowCoverage 1 lowCoverage 0.74245 0.88411 -0.140635 5 0.77585 0.90614 -0.130294 9.9996e-01 8.2734e-06 weaklyHypometh 1.0000e+00 0.0011819 weaklyHypometh 9.9814e-01 0.00068463 weaklyHypometh 1.0000e+00 0.10894 insignificant -0.194884 2.7177e-02 lowCoverage 0.934306 lowCoverage 0.74245 0.55414 0.1291576 5 0.77585 0.66514 0.1107118 6.5563e-04 0.99551 weaklyHypermeth 6.5563e-02 1 weaklyHypermeth 1.6897e-01 0.96322 insignificant 1.0000000 1 insignificant -0.0102321 0.9038743 lowCoverage 1 lowCoverage 0.88411 0.55414 0.273680 5 0.90614 0.66514 0.241006 2.4217e-07 9.9992e-01 hypermethylated 3.4595e-05 1.0000e+00 hypermethylated 0.0022266 9.9783e-01 weaklyHypermeth 0.34041 1.000000 insignificant 0.184652 0.00653687 lowCoverage 0.326843 lowCoverage chr5 158564060 158565060 62953 EBF1 ENSG00000164330 0.68103 186 5 0.45988 131 5 0.46636 57 5 0.67264 131 5 0.38552 58 4 0.53898 278 5 0.62778 49 5 0.67522 143 5 0.48192 62 5 0.64687 48 5 0.64143 246 5 0.33333 15 0 0.60513 67 5 0.56000 22 3 0.61126 61 5 0.26667 20 3 1.00000 1 0 0.70458 130 5 0.79729 104 5 0.64528 164 5 0.57071 36 3 0.56863 47 4 0.73273 53 5 0.56489 65 5 0.67262 40 5 0.65065 128 5 0.51103 67 5 0.54667 32 5 0.65855 80 5 0.61254 160 5 0.68486 134 5 0.57047 206 5 0.578470 116 5 0.57889 55 5 0.68305 133 5 0.30000 12 0 0.47295 102 5 0.54651 145 5 0.66331 162 5 0.64839 137 5 0.51439 95 5 0.54726 84 5 0.64547 185 5 0.63800 0.56230 0.47060 0.61986 0.48823 0.55389 0.66081 0.68125 0.51632 0.65449 0.71020 0.35168 0.61918 0.59144 0.63903 0.27217 NA 0.66315 0.73586 0.65263 0.59350 0.63616 0.75421 0.79736 0.62353 0.66424 0.52328 0.56024 0.67197 0.63460 0.68961 0.58677 0.59410 0.58486 0.63869 0.30734 0.48112 0.56083 0.68388 0.65752 0.54353 0.68416 0.66345 1 0.60872 0.63645 -0.0287574 5 0.64040 0.58327 0.05712828 0.84853 0.309943 insignificant 1 1 insignificant 0.96658 0.16728 insignificant 1 1 insignificant -0.0219701 0.60204 lowCoverage 1 lowCoverage 0.60843 0.56661 0.040134 5 0.60387 0.63485 -0.030976 7.2157e-02 8.2818e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.1593e-01 0.9351036 insignificant 1.0000e+00 1.00000 insignificant 0.063413 3.4896e-01 lowCoverage 1.00000000 lowCoverage 0.60843 0.61689 -0.021873 5 0.60387 0.52443 0.0794390 6.3578e-01 0.29704 insignificant 1.0000e+00 1 insignificant 7.8296e-01 0.20268 insignificant 1.0000e+00 1 insignificant -0.013705 0.777794 lowCoverage 1 lowCoverage 0.63854 0.56661 0.072263 5 0.69437 0.63485 0.059520 1.3798e-02 9.9770e-01 weaklyHypermeth 3.5379e-01 1.0000000 insignificant 3.8332e-03 0.99948317 weaklyHypermeth 1.7423e-01 1.00000 insignificant 0.085383 1.7861e-01 lowCoverage 1.000000 lowCoverage 0.63854 0.61689 0.0065518 5 0.69437 0.52443 0.1699346 6.3198e-01 0.65494 insignificant 1.0000e+00 1 insignificant 4.6555e-01 0.83456 insignificant 1.0000000 1 insignificant 0.0082647 0.8245875 lowCoverage 1 lowCoverage 0.56661 0.61689 -0.059867 5 0.63485 0.52443 0.110415 9.5398e-01 2.4690e-02 weaklyHypometh 1.0000e+00 8.5139e-01 insignificant 0.9880724 3.7520e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.077118 0.24386847 lowCoverage 1.000000 lowCoverage chr5 163802001 163803001 63301 ENSG00000208477 0.86810 286 7 0.77027 116 7 0.85182 112 7 0.89724 120 7 0.88554 67 7 0.86578 246 7 0.80355 126 7 0.86825 87 7 0.90782 111 7 0.88709 111 7 0.84604 176 7 0.71429 51 7 0.87628 131 7 0.85714 7 1 0.93459 143 7 0.81645 53 7 0.80844 70 7 0.89154 173 7 0.88047 159 7 0.90128 238 7 0.94286 42 5 0.91279 108 7 0.84125 155 7 0.88673 54 7 0.84388 54 7 0.89742 151 7 0.75762 66 4 0.91701 50 6 0.85918 98 7 0.77236 133 7 0.81178 105 7 0.83349 300 7 0.81669 90 4 0.74189 136 7 0.83016 116 7 0.91612 81 7 0.78794 58 4 0.79408 158 7 0.90923 301 7 0.87615 269 7 0.86962 179 7 0.84057 302 7 0.90125 272 7 0.87101 0.78151 0.85857 0.89606 0.89635 0.85545 0.80180 0.86435 0.91212 0.88371 0.86069 0.73082 0.88229 NA 0.93665 0.81015 0.81790 0.90097 0.88082 0.89954 0.93975 0.92582 0.84653 0.91405 0.81590 0.90716 0.75404 0.92349 0.85914 0.80021 0.81259 0.83360 0.80349 0.72668 0.83245 0.92115 0.84442 0.80256 0.91060 0.88396 0.87255 0.85314 0.90322 4 0.87302 0.85182 0.0180094 7 0.86666 0.84945 0.01720999 0.091912 0.90152 insignificant 1 1 insignificant 0.49229 0.35740 insignificant 1 1 insignificant 0.0002353 0.99086 insignificant 1 insignificant 0.87302 0.81534 0.052219 7 0.86666 0.81469 0.0519614 6.0617e-04 0.99953 weaklyHypermeth 0.0390753 1 weaklyHypermeth 0.0475611 0.98639 weaklyHypermeth 1.00000 1 insignificant 0.042121 0.152392 insignificant 1 insignificant 0.87302 0.88964 -0.0152158 7 0.86666 0.88038 -0.013721 0.82660 0.21889562 insignificant 1 1.00000 insignificant 0.84711 0.22577892 insignificant 1 1.00000 insignificant -0.0227642 0.2008720 insignificant 1.00000 insignificant 0.85182 0.81534 0.034558 7 0.84945 0.81469 0.034751 2.5855e-02 0.94106 weaklyHypermeth 1.0000000 1 insignificant 0.1248585 0.95919 insignificant 1.0000 1 insignificant 0.041886 0.179752 insignificant 1 insignificant 0.85182 0.88964 -0.033595 7 0.84945 0.88038 -0.030931 0.99286 0.09303619 insignificant 1 1.00000 insignificant 0.90832 0.531017 insignificant 1 1 insignificant -0.0229995 0.283714 insignificant 1 insignificant 0.81534 0.88964 -0.067583 7 0.81469 0.88038 -0.065683 0.99805 1.8473e-03 weaklyHypometh 1 1.1545e-01 insignificant 0.98958 0.0822276 insignificant 1 1.00000 insignificant -0.064885 0.0440241 weaklyHypometh 1.00000 insignificant chr5 164695196 164696196 63432 ENSG00000206845 0.82667 236 9 0.91278 61 5 0.64702 55 6 0.88660 298 9 0.60123 43 3 0.85906 244 10 0.93651 31 3 0.95119 58 6 0.73333 31 3 0.92222 52 6 0.85879 140 10 0.75833 20 1 0.88889 106 7 NA 0 0 0.93175 57 5 0.91667 20 1 0.93000 48 5 0.76570 321 9 0.90452 94 8 0.86978 221 10 0.80898 36 2 0.94223 78 5 0.85082 127 9 0.89028 51 6 0.86177 48 5 0.87876 148 10 0.73426 55 5 0.91667 20 1 0.76462 61 4 0.81291 132 9 0.86069 159 9 0.87027 282 10 0.68103 80 6 0.81115 98 5 0.85643 235 10 0.82292 24 0 0.88565 47 5 0.85810 136 10 0.87522 204 9 0.85611 282 9 0.78712 182 9 0.88680 134 9 0.86514 256 9 0.91138 0.89697 0.84564 0.95241 0.85927 0.89533 0.87772 0.94359 0.81705 0.87058 0.94309 0.73636 0.98106 NA 0.89340 1.00000 0.88977 0.88590 0.96063 0.95832 0.88129 0.89416 0.91331 0.91935 0.84558 0.94146 0.72336 0.88447 0.86786 0.93103 0.93403 0.93466 0.70760 0.80127 0.90511 0.88608 0.93475 0.87626 0.91108 0.89813 0.96120 0.94725 0.89254 1 0.88144 0.85129 0.0255185 9 0.85111 0.85101 0.00010327 0.055546 0.75597 insignificant 1 1 insignificant 0.22703 0.71988 insignificant 1 1 insignificant -0.0019303 0.94729 insignificant 1 insignificant 0.88128 0.83226 0.044226 9 0.82384 0.83782 -0.0139793 8.8505e-04 0.92787 weaklyHypermeth 0.0491692 1 weaklyHypermeth 0.1689795 0.98277 insignificant 1.00000 1 insignificant 0.028211 0.468687 insignificant 1 insignificant 0.88109 0.87807 0.0022677 9 0.82185 0.85108 -0.029223 0.67592 0.33923440 insignificant 1 1.00000 insignificant 0.52235 0.62443074 insignificant 1 1.00000 insignificant -0.0066552 0.8212469 insignificant 1.00000 insignificant 0.85105 0.83199 0.020832 9 0.83611 0.82160 0.014509 7.5354e-02 0.79989 insignificant 1.0000000 1 insignificant 0.2325398 0.95228 insignificant 1.0000 1 insignificant 0.030142 0.405061 insignificant 1 insignificant 0.85129 0.87796 -0.027263 9 0.85101 0.83754 0.013471 0.97304 0.05869208 insignificant 1 1.00000 insignificant 0.96002 0.312254 insignificant 1 1 insignificant -0.0047248 0.851331 insignificant 1 insignificant 0.83226 0.87879 -0.044413 9 0.83782 0.88299 -0.045174 0.99032 1.0532e-02 weaklyHypometh 1 4.7873e-01 insignificant 0.99464 0.1864045 insignificant 1 1.00000 insignificant -0.034867 0.3419915 insignificant 1.00000 insignificant chr5 164695321 164696321 63433 ENSG00000206845 0.86401 419 15 0.88446 127 10 0.67444 115 11 0.88117 407 15 0.70059 75 5 0.86643 367 15 0.88604 100 8 0.95322 109 10 0.80222 83 6 0.92062 101 9 0.86449 260 15 0.71880 81 6 0.86290 168 12 NA 0 0 0.83537 127 10 0.95455 47 6 0.82340 90 10 0.79443 431 15 0.88998 165 13 0.82170 345 16 0.86173 63 5 0.84634 114 8 0.85731 245 15 0.85903 68 8 0.81706 82 8 0.83105 220 15 0.68632 85 7 0.95076 53 3 0.78638 108 8 0.85028 198 12 0.79190 250 14 0.86501 442 15 0.72738 121 9 0.83584 146 9 0.83411 354 15 0.78452 63 4 0.85112 72 7 0.86338 220 15 0.89523 408 15 0.89364 472 15 0.84724 325 15 0.90091 290 15 0.88825 408 15 0.89755 0.86902 0.82189 0.83792 0.85765 0.91000 0.85239 0.94151 0.84944 0.87489 0.94158 0.77626 0.90162 NA 0.84167 1.00000 0.75034 0.88651 0.89151 0.88752 0.92849 0.77675 0.88252 0.91838 0.76386 0.91837 0.76180 0.93399 0.84655 0.91954 0.88107 0.89486 0.80989 0.82859 0.82401 0.87102 0.87637 0.83689 0.90832 0.92049 0.93481 0.92233 0.91747 3 0.87690 0.85529 0.0186165 14 0.85469 0.84910 0.00558649 0.037253 0.68287 weaklyHypermeth 1 1 insignificant 0.29402 0.50029 insignificant 1 1 insignificant 0.0084471 0.74186 insignificant 1 insignificant 0.87680 0.83402 0.039204 14 0.83704 0.83545 0.0015947 1.5699e-03 0.98351 weaklyHypermeth 0.0826253 1 weaklyHypermeth 0.2160845 0.96442 insignificant 1.00000 1 insignificant 0.025985 0.360792 insignificant 1 insignificant 0.87669 0.90594 -0.0244602 14 0.83498 0.88064 -0.045656 0.96268 0.03974761 weaklyHypometh 1 1.00000 insignificant 0.91013 0.13011226 insignificant 1 1.00000 insignificant -0.0430094 0.0456284 weaklyHypometh 1.00000 insignificant 0.85514 0.83385 0.020960 14 0.83967 0.82516 0.014509 9.3702e-02 0.86822 insignificant 1.0000000 1 insignificant 0.2702871 0.98338 insignificant 1.0000 1 insignificant 0.017538 0.536765 insignificant 1 insignificant 0.85529 0.90589 -0.042533 14 0.84910 0.87362 -0.024517 0.99951 0.00249372 weaklyHypometh 1 1.00000 insignificant 0.99587 0.111051 insignificant 1 1 insignificant -0.0514564 0.024108 weaklyHypometh 1 insignificant 0.83402 0.90637 -0.062790 14 0.83545 0.90303 -0.067584 0.99992 2.8725e-04 weaklyHypometh 1 2.0518e-02 weaklyHypometh 0.99986 0.0266734 weaklyHypometh 1 1.00000 insignificant -0.068994 0.0199685 weaklyHypometh 1.00000 insignificant chr5 165457090 165458090 63548 ENSG00000213403 0.81000 451 15 0.78200 120 9 0.70287 145 11 0.88027 325 15 0.86520 106 8 0.77727 447 14 0.84108 92 8 0.85136 149 10 0.82134 90 10 0.91622 98 10 0.91986 313 15 0.65385 47 3 0.91172 135 9 NA 0 0 0.77743 99 7 0.67179 40 4 0.96296 50 3 0.86679 451 15 0.85163 143 14 0.79974 378 16 0.77308 45 3 0.90062 128 12 0.82352 218 16 0.79926 53 4 0.87782 102 11 0.87473 243 15 0.70006 109 8 0.91250 22 2 0.89534 106 10 0.90333 214 15 0.81386 208 13 0.86526 418 15 0.68037 179 13 0.67355 166 10 0.71665 285 16 0.93535 83 5 0.85154 68 7 0.81786 189 14 0.87774 373 15 0.91405 389 15 0.88507 366 15 0.88703 318 15 0.90509 365 15 0.86831 0.87774 0.84275 0.87603 0.90538 0.82358 0.89697 0.88090 0.77109 0.83811 0.92769 0.75691 0.95384 NA 0.92909 0.66960 0.94912 0.88967 0.82291 0.85065 0.87767 0.88965 0.84782 0.83947 0.86711 0.90831 0.84267 0.92547 0.80876 0.95921 0.85167 0.89040 0.77291 0.76221 0.73300 0.86663 0.88376 0.86063 0.92633 0.88439 0.89007 0.90807 0.93279 2 0.86382 0.86281 -0.0021852 14 0.84555 0.84003 0.00551971 0.741254 0.62054 insignificant 1 1 insignificant 0.94319 0.65245 insignificant 1 1 insignificant -0.0205589 0.44908 insignificant 1 insignificant 0.86400 0.79381 0.067915 15 0.85229 0.77347 0.0788159 1.3757e-05 1.00000 weaklyHypermeth 0.0012506 1 weaklyHypermeth 0.0345215 0.99988 weaklyHypermeth 1.00000 1 insignificant 0.045168 0.370822 insignificant 1 insignificant 0.86400 0.91055 -0.0391015 14 0.85229 0.89998 -0.047689 0.99959 0.01362342 weaklyHypometh 1 1.00000 insignificant 0.95587 0.07462738 insignificant 1 1.00000 insignificant -0.0694069 0.0026679 weaklyHypometh 0.66698 insignificant 0.86312 0.79381 0.073008 14 0.85129 0.77347 0.077815 1.5053e-05 1.00000 weaklyHypermeth 0.0016725 1 weaklyHypermeth 0.0124517 0.99995 weaklyHypermeth 0.8894 1 insignificant 0.065727 0.205343 insignificant 1 insignificant 0.86312 0.91055 -0.033587 14 0.85129 0.89998 -0.048690 0.99544 0.00553630 weaklyHypometh 1 1.00000 insignificant 0.97747 0.287918 insignificant 1 1 insignificant -0.0488480 0.027694 weaklyHypometh 1 insignificant 0.79381 0.91055 -0.104293 14 0.77347 0.89998 -0.126504 1.00000 8.3348e-08 weaklyHypometh 1 1.0418e-05 weaklyHypometh 0.99998 0.0025581 weaklyHypometh 1 0.31976 insignificant -0.114575 0.0449065 weaklyHypometh 1.00000 insignificant chr5 165616378 165617378 63570 ENSG00000213403 0.78095 241 9 0.57898 98 7 0.66296 60 7 0.77559 181 7 0.74444 57 5 0.75503 254 9 0.61517 116 7 0.66883 109 6 0.71644 87 7 0.74012 115 9 0.73904 225 9 0.55000 60 6 0.77645 132 7 0.95000 20 2 0.65547 144 7 0.72492 56 7 0.82555 69 8 0.72954 164 7 0.65250 143 7 0.65059 228 10 0.64396 58 5 0.79048 54 6 0.69527 148 8 0.76094 61 6 0.80357 27 1 0.74496 170 9 0.64964 75 6 0.77831 45 6 0.63200 115 6 0.63508 179 7 0.69521 134 6 0.75517 298 9 0.44435 92 6 0.66481 128 9 0.61818 162 9 0.76361 65 6 0.74054 62 4 0.65363 156 7 0.70206 271 9 0.69606 269 7 0.70091 202 7 0.75585 242 9 0.75308 257 7 0.87180 0.69388 0.74083 0.85175 0.88234 0.81532 0.75460 0.78096 0.80476 0.78162 0.81897 0.66055 0.83261 NA 0.81819 0.73826 0.89737 0.81813 0.83143 0.77117 0.74721 0.85856 0.80060 0.86301 0.84582 0.79378 0.75338 0.88788 0.73671 0.77118 0.74350 0.78729 0.63564 0.74397 0.73710 0.77362 0.78685 0.73614 0.77121 0.85498 0.80570 0.84803 0.82696 3 0.79680 0.76540 0.0241988 7 0.68631 0.69197 -0.00566723 0.038421 0.92401 weaklyHypermeth 1 1 insignificant 0.51214 0.90386 insignificant 1 1 insignificant -0.0007520 0.97834 insignificant 1 insignificant 0.79680 0.72782 0.066551 7 0.68631 0.60158 0.0847235 8.4591e-05 0.99621 weaklyHypermeth 0.0070493 1 weaklyHypermeth 0.0054486 0.99498 weaklyHypermeth 0.42672 1 insignificant 0.067110 0.226469 insignificant 1 insignificant 0.79680 0.81467 -0.0101385 7 0.68631 0.66061 0.025695 0.52201 0.50159631 insignificant 1 1.00000 insignificant 0.75348 0.38218940 insignificant 1 1.00000 insignificant -0.0069641 0.7772512 insignificant 1.00000 insignificant 0.76540 0.72782 0.045674 7 0.69197 0.60158 0.090391 4.1300e-03 0.93852 weaklyHypermeth 0.2429424 1 insignificant 0.0162683 0.97204 weaklyHypermeth 1.0000 1 insignificant 0.067862 0.218822 insignificant 1 insignificant 0.76540 0.81467 -0.030532 7 0.69197 0.66061 0.031363 0.78748 0.04675073 weaklyHypometh 1 1.00000 insignificant 0.71747 0.087794 insignificant 1 1 insignificant -0.0062121 0.790376 insignificant 1 insignificant 0.72782 0.81467 -0.076311 7 0.60158 0.66061 -0.059028 0.99978 7.6256e-03 weaklyHypometh 1 3.8128e-01 insignificant 0.99995 0.0198640 weaklyHypometh 1 1.00000 insignificant -0.074074 0.1776256 insignificant 1.00000 insignificant chr5 166695559 166696559 63857 ODZ2 ENSG00000145934 0.82673 169 5 0.73148 95 5 0.61630 73 5 0.86802 115 5 0.86071 45 5 0.83095 191 5 0.66987 53 4 0.84025 106 5 0.71688 53 5 0.82667 72 5 0.76356 189 5 0.72000 45 5 0.78044 95 5 0.93810 33 5 0.78909 77 5 0.64444 25 1 0.86508 32 3 0.84336 139 5 0.81782 107 5 0.77230 132 5 0.93000 27 3 0.77619 43 5 0.74560 70 5 0.64545 35 4 0.73824 61 5 0.83805 115 5 0.85917 64 4 1.00000 12 1 0.72682 74 2 0.68222 115 5 0.80904 77 5 0.77243 205 5 0.65864 94 5 0.77548 76 5 0.83330 109 5 0.78462 25 1 0.73893 59 5 0.70378 156 5 0.77216 102 5 0.79694 130 5 0.79000 92 5 0.85057 93 5 0.86929 147 5 0.85891 0.69523 0.68289 0.90068 0.88883 0.86641 0.65791 0.87827 0.80419 0.87887 0.89866 0.76303 0.81571 0.95037 0.82371 0.72457 0.85060 0.86004 0.83406 0.89437 0.92183 0.84792 0.79879 0.67862 0.79222 0.81605 0.84822 0.90594 0.79020 0.80677 0.78744 0.81050 0.72223 0.70788 0.82169 0.82376 0.78810 0.75661 0.84147 0.83073 0.84774 0.87798 0.90443 2 0.83424 0.79844 0.0348671 5 0.72532 0.76184 -0.03652578 0.085749 0.97039 insignificant 1 1 insignificant 0.49928 0.96347 insignificant 1 1 insignificant -0.0074971 0.83047 lowCoverage 1 lowCoverage 0.83397 0.74566 0.080665 5 0.68608 0.80123 -0.1151532 6.2521e-04 0.99641 weaklyHypermeth 0.0390753 1 weaklyHypermeth 0.0411663 0.99067 weaklyHypermeth 1.00000 1 insignificant 0.036980 0.264263 lowCoverage 1 lowCoverage 0.83460 0.86170 -0.0135501 5 0.81051 0.81729 -0.006783 0.54795 0.26295901 insignificant 1 1.00000 insignificant 0.60106 0.30179394 insignificant 1 1.00000 insignificant -0.0296873 0.2789617 lowCoverage 1.00000 lowCoverage 0.79686 0.74566 0.038422 5 0.72782 0.80123 -0.073409 2.1277e-02 0.77789 weaklyHypermeth 0.9671270 1 insignificant 0.0789269 0.90700 insignificant 1.0000 1 insignificant 0.044477 0.268711 lowCoverage 1 lowCoverage 0.79774 0.86170 -0.054490 5 0.76895 0.81729 -0.048342 0.77877 0.00723009 weaklyHypometh 1 1.00000 insignificant 0.74374 0.041252 weaklyHypometh 1 1 insignificant -0.0221902 0.532027 lowCoverage 1 lowCoverage 0.74419 0.86170 -0.094940 5 0.72172 0.81729 -0.095568 0.99960 2.6363e-04 weaklyHypometh 1 2.0279e-02 weaklyHypometh 0.99886 0.0019392 weaklyHypometh 1 0.27703 insignificant -0.066668 0.0648824 lowCoverage 1.00000 lowCoverage chr5 167086037 167087037 64000 ODZ2 ENSG00000145934 0.76776 317 9 0.68235 139 9 0.57593 91 6 0.77003 169 9 0.84945 97 7 0.60491 364 9 0.81968 110 9 0.73314 172 9 0.70973 112 9 0.83410 89 8 0.83503 297 9 0.81702 46 5 0.77971 161 9 0.82000 36 5 0.72574 114 9 0.68342 49 5 0.78153 79 5 0.81094 193 9 0.83544 150 9 0.64639 298 9 0.71071 46 4 0.69146 76 6 0.63799 150 9 0.69242 56 4 0.92963 44 5 0.71828 238 9 0.76033 109 6 0.77385 38 3 0.78916 156 8 0.81953 176 9 0.79292 223 9 0.70133 384 9 0.61111 127 9 0.65862 164 9 0.71861 161 9 0.66045 57 5 0.52472 60 7 0.72948 206 9 0.86129 224 9 0.85366 267 9 0.84971 205 9 0.81069 211 9 0.73666 278 9 0.82808 0.75283 0.64654 0.78436 0.91360 0.78858 0.85481 0.82033 0.73400 0.88897 0.86600 0.78882 0.82676 0.82608 0.80794 0.74611 0.82389 0.83131 0.88375 0.77028 0.89565 0.80779 0.84923 0.89142 0.89813 0.83675 0.73630 0.79654 0.83396 0.85269 0.78909 0.80897 0.76401 0.66533 0.79860 0.76046 0.77528 0.81806 0.90464 0.89578 0.89671 0.85003 0.86375 3 0.79436 0.80778 -0.0118377 9 0.72065 0.61168 0.10897236 0.970181 0.33511 insignificant 1 1 insignificant 0.91699 0.17791 insignificant 1 1 insignificant 0.0026465 0.92733 insignificant 1 insignificant 0.79436 0.73677 0.051548 9 0.72065 0.63799 0.0826660 2.5521e-03 0.99274 weaklyHypermeth 0.1276065 1 insignificant 0.0759243 0.99829 insignificant 1.00000 1 insignificant 0.103616 0.017999 weaklyHypermeth 1 insignificant 0.79584 0.86582 -0.0691473 9 0.76880 0.75437 0.014438 1.00000 0.00004039 weaklyHypometh 1 0.04039 weaklyHypometh 0.99907 0.00058249 weaklyHypometh 1 0.58249 insignificant -0.0682870 0.0435726 weaklyHypometh 1.00000 insignificant 0.80778 0.73677 0.061891 9 0.61168 0.63799 -0.026306 3.3594e-04 0.97359 weaklyHypermeth 0.0261287 1 weaklyHypermeth 0.0069936 0.99312 weaklyHypermeth 0.5828 1 insignificant 0.100969 0.023371 weaklyHypermeth 1 insignificant 0.80865 0.86582 -0.051780 9 0.61057 0.75437 -0.143793 0.99999 0.00091674 weaklyHypometh 1 0.91674 insignificant 0.99965 0.114358 insignificant 1 1 insignificant -0.0709336 0.048695 weaklyHypometh 1 insignificant 0.73992 0.86582 -0.114661 9 0.66338 0.75437 -0.090989 0.99999 3.7151e-06 weaklyHypometh 1 4.1279e-04 weaklyHypometh 1.00000 0.0040677 weaklyHypometh 1 0.36979 insignificant -0.171903 0.0016800 weaklyHypometh 0.29603 insignificant chr5 167179441 167180441 64034 ODZ2 ENSG00000145934 0.95004 230 5 0.84862 109 5 0.77041 113 5 0.92912 177 5 0.89349 49 5 0.93750 275 5 0.93038 105 5 0.90000 100 5 0.86374 72 5 0.92952 62 5 0.91260 147 5 0.87308 43 4 0.95793 93 5 1.00000 11 1 0.95682 61 5 0.80000 16 2 0.88854 46 4 0.86210 187 5 0.98667 82 5 0.90824 226 5 0.94182 35 4 0.89197 65 4 0.99394 133 5 0.82286 32 3 0.95139 41 4 0.87514 118 5 0.97564 70 5 0.96848 45 5 0.92297 80 5 0.92521 133 5 0.93254 126 5 0.93636 257 5 0.3408133 117 5 0.189821 81 5 0.0178571 148 4 0.050000 26 2 0.540624 88 5 0.1819510 171 5 0.888972 234 5 0.85578 168 5 0.854003 176 5 0.86253 163 5 0.87087 180 5 0.94809 0.89110 0.79272 0.94196 0.88995 0.94076 0.92737 0.91121 0.87240 0.91777 0.91470 0.85279 0.96868 0.93728 0.97335 0.82069 0.86625 0.84345 0.97885 0.90639 0.93530 0.89871 0.99039 0.85670 0.94129 0.89278 0.98187 0.95628 0.93110 0.94742 0.94450 0.93395 0.33896871 0.223353 0.0283251 0.0793103 0.566346 0.198118 0.895953 0.85638 0.849415 0.85983 0.90203 3 0.91198 0.93392 -0.02152812 5 0.91045 0.93520 -0.0247530 0.954482 2.8193e-02 weaklyHypometh 1 1.0000000 insignificant 0.923916 0.13127523 insignificant 1 1.00000 insignificant -0.0232536 0.225079 lowCoverage 1 lowCoverage 0.91198 0.213946 0.7009512 5 0.91045 0.203305 0.7071442 8.8982e-51 1.000000 hypermethylated 1.4830e-48 1 hypermethylated 2.9349e-14 1.000000 hypermethylated 4.8914e-12 1 hypermethylated 0.684762 2.8527e-04 lowCoverage 8.8180e-03 lowCoverage 0.91198 0.870793 0.0358973 5 0.91045 0.869975 0.0404744 6.7229e-03 0.9584589 weaklyHypermeth 1.2076e-01 1 insignificant 1.1379e-02 0.9929104 weaklyHypermeth 2.5015e-01 1 insignificant 0.038509 1.3611e-02 lowCoverage 4.3906e-01 lowCoverage 0.93392 0.213946 0.7203222 5 0.93520 0.203305 0.7318972 1.6628e-36 1.00000 hypermethylated 2.3755e-34 1 hypermethylated 1.0004e-12 1.000000 hypermethylated 1.6674e-10 1 hypermethylated 0.708015 2.3700e-04 lowCoverage 7.4064e-03 lowCoverage 0.93392 0.870793 0.055946 5 0.93520 0.869975 0.0652274 4.8399e-05 0.9912132 weaklyHypermeth 1.3444e-03 1 weaklyHypermeth 1.5958e-03 0.997066 weaklyHypermeth 5.5029e-02 1 weaklyHypermeth 0.0617628 9.7092e-04 lowCoverage 0.0956115 lowCoverage 0.213946 0.870793 -0.668645 5 0.203305 0.869975 -0.66666981 1.00000000 1.7803e-17 hypomethylated 1.000000 2.9672e-15 hypomethylated 1.0000000 1.5965e-08 hypomethylated 1 3.9912e-06 hypomethylated -0.646253 4.3653e-04 lowCoverage 0.0218264 lowCoverage chr5 167179838 167180838 64035 ODZ2 ENSG00000145934 0.95004 230 5 0.84862 109 5 0.77041 113 5 0.92912 177 5 0.89349 49 5 0.93750 275 5 0.93038 105 5 0.90000 100 5 0.86374 72 5 0.92952 62 5 0.91260 147 5 0.87308 43 4 0.95793 93 5 1.00000 11 1 0.95682 61 5 0.80000 16 2 0.88854 46 4 0.86210 187 5 0.98667 82 5 0.90824 226 5 0.94182 35 4 0.89197 65 4 0.99394 133 5 0.82286 32 3 0.95139 41 4 0.87514 118 5 0.97564 70 5 0.96848 45 5 0.92297 80 5 0.92521 133 5 0.93254 126 5 0.93636 257 5 0.3408133 117 5 0.189821 81 5 0.0178571 148 4 0.050000 26 2 0.540624 88 5 0.1819510 171 5 0.888972 234 5 0.85578 168 5 0.854003 176 5 0.86253 163 5 0.87087 180 5 0.94809 0.89110 0.79272 0.94196 0.88995 0.94076 0.92737 0.91121 0.87240 0.91777 0.91470 0.85279 0.96868 0.93728 0.97335 0.82069 0.86625 0.84345 0.97885 0.90639 0.93530 0.89871 0.99039 0.85670 0.94129 0.89278 0.98187 0.95628 0.93110 0.94742 0.94450 0.93395 0.33896871 0.223353 0.0283251 0.0793103 0.566346 0.198118 0.895953 0.85638 0.849415 0.85983 0.90203 3 0.91198 0.93392 -0.02152812 5 0.91045 0.93520 -0.0247530 0.954482 2.8193e-02 weaklyHypometh 1 1.0000000 insignificant 0.923916 0.13127523 insignificant 1 1.00000 insignificant -0.0232536 0.225079 lowCoverage 1 lowCoverage 0.91198 0.213946 0.7009512 5 0.91045 0.203305 0.7071442 8.8982e-51 1.000000 hypermethylated 1.4830e-48 1 hypermethylated 2.9349e-14 1.000000 hypermethylated 4.8914e-12 1 hypermethylated 0.684762 2.8527e-04 lowCoverage 8.8180e-03 lowCoverage 0.91198 0.870793 0.0358973 5 0.91045 0.869975 0.0404744 6.7229e-03 0.9584589 weaklyHypermeth 1.2076e-01 1 insignificant 1.1379e-02 0.9929104 weaklyHypermeth 2.5015e-01 1 insignificant 0.038509 1.3611e-02 lowCoverage 4.3906e-01 lowCoverage 0.93392 0.213946 0.7203222 5 0.93520 0.203305 0.7318972 1.6628e-36 1.00000 hypermethylated 2.3755e-34 1 hypermethylated 1.0004e-12 1.000000 hypermethylated 1.6674e-10 1 hypermethylated 0.708015 2.3700e-04 lowCoverage 7.4064e-03 lowCoverage 0.93392 0.870793 0.055946 5 0.93520 0.869975 0.0652274 4.8399e-05 0.9912132 weaklyHypermeth 1.3444e-03 1 weaklyHypermeth 1.5958e-03 0.997066 weaklyHypermeth 5.5029e-02 1 weaklyHypermeth 0.0617628 9.7092e-04 lowCoverage 0.0956115 lowCoverage 0.213946 0.870793 -0.668645 5 0.203305 0.869975 -0.66666981 1.00000000 1.7803e-17 hypomethylated 1.000000 2.9672e-15 hypomethylated 1.0000000 1.5965e-08 hypomethylated 1 3.9912e-06 hypomethylated -0.646253 4.3653e-04 lowCoverage 0.0218264 lowCoverage chr5 167220855 167221855 64049 ODZ2 ENSG00000145934 0.74669 542 8 0.56538 392 8 0.64997 191 8 0.67258 372 8 0.62928 133 8 0.78067 512 8 0.65155 266 8 0.70943 187 8 0.68468 157 8 0.77211 105 8 0.70123 389 8 0.67014 84 8 0.44158 117 8 0.76042 104 8 0.60658 166 8 0.62749 104 8 0.50000 2 0 0.66099 329 8 0.62808 275 8 0.69974 369 8 0.71520 103 8 0.50685 68 4 0.78446 212 8 0.70861 127 8 0.75694 38 3 0.73740 384 8 0.75273 181 7 0.64435 53 4 0.63830 224 8 0.55234 418 8 0.61990 381 8 0.79052 338 8 0.6285361 293 8 0.504506 209 8 0.4114219 336 4 0.416667 14 0 0.559360 350 8 0.7013238 405 8 0.598454 459 8 0.62827 366 8 0.521050 410 8 0.66185 321 8 0.57155 353 8 0.80942 0.60357 0.68635 0.74545 0.74863 0.80807 0.67543 0.77351 0.76980 0.79616 0.74635 0.71238 0.51621 0.81861 0.65421 0.68077 0.62599 0.77624 0.73405 0.76549 0.82328 0.54893 0.84570 0.80380 0.83401 0.77351 0.72910 0.73495 0.71929 0.67949 0.67788 0.80852 0.63060175 0.656396 0.5297376 0.6838191 0.620892 0.733974 0.686362 0.70353 0.622842 0.73208 0.66982 4 0.69933 0.70772 -0.00887423 8 0.71235 0.72256 -0.0102063 0.846259 7.7291e-02 insignificant 1 1.0000000 insignificant 0.954422 0.06146089 insignificant 1 1.00000 insignificant -0.0260375 0.433935 insignificant 1 insignificant 0.69927 0.627256 0.1109367 8 0.67640 0.587238 0.0891595 3.7649e-07 0.279468 weaklyHypermeth 6.4912e-06 1 weaklyHypermeth 1.4471e-03 0.663169 weaklyHypermeth 2.5841e-02 1 weaklyHypermeth 0.120960 5.1103e-02 insignificant 6.9358e-01 insignificant 0.69927 0.620744 0.0789221 8 0.67640 0.587017 0.0893803 2.3433e-04 0.9978967 weaklyHypermeth 7.1008e-03 1 weaklyHypermeth 7.9648e-03 0.9849910 weaklyHypermeth 1.8523e-01 1 insignificant 0.061696 7.3276e-02 insignificant 1.0000e+00 insignificant 0.70761 0.627256 0.1222915 8 0.68788 0.587238 0.1006416 1.8863e-06 0.52276 weaklyHypermeth 3.1972e-05 1 weaklyHypermeth 3.9493e-04 0.925743 weaklyHypermeth 8.4027e-03 1 weaklyHypermeth 0.146997 2.5880e-02 weaklyHypermeth 3.8784e-01 insignificant 0.70761 0.620744 0.088418 8 0.68788 0.587017 0.1008623 4.2565e-05 0.9998721 weaklyHypermeth 1.2519e-03 1 weaklyHypermeth 8.5498e-04 0.999983 weaklyHypermeth 3.6184e-02 1 weaklyHypermeth 0.0877336 2.9426e-02 weaklyHypermeth 0.8654803 insignificant 0.627256 0.620744 -0.051640 8 0.587238 0.587017 0.00022074 0.12575255 1.0313e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7665953 1.4796e-01 insignificant 1 1.0000e+00 insignificant -0.059264 2.9971e-01 insignificant 1.0000000 insignificant chr5 167470127 167471127 64137 ENSG00000208456 0.76062 202 5 0.61876 170 5 0.71481 100 5 0.80025 116 5 0.76000 25 3 0.85050 201 5 0.76667 75 5 0.83578 51 3 0.72211 56 3 0.90222 53 3 0.88236 188 5 0.54286 23 3 0.78893 82 3 1.00000 4 0 0.66000 50 3 0.74000 13 1 0.71673 33 3 0.63768 98 5 0.80828 51 5 0.70005 201 5 0.72222 38 3 0.54381 41 3 0.66105 121 5 0.68889 55 5 0.71574 73 4 0.71105 145 5 0.74213 69 4 0.86667 11 0 0.70748 78 5 0.72495 180 5 0.76741 150 5 0.81337 176 5 0.1303100 105 5 0.204762 88 5 0.0000000 101 2 0.480303 66 5 0.084589 93 5 0.1100233 152 5 0.279021 222 5 0.43902 198 5 0.503889 158 5 0.27707 124 3 0.50094 130 5 0.72459 0.53068 0.57407 0.74193 0.62887 0.81255 0.69085 0.74533 0.59305 0.85750 0.86217 0.81443 0.67646 0.69334 0.48763 0.63402 0.73834 0.52687 0.73420 0.58611 0.65922 0.32671 0.57182 0.53036 0.62519 0.63164 0.64498 0.78694 0.58427 0.58838 0.65219 0.77345 0.07844874 0.089200 0.0731863 0.2440644 0.093966 0.091798 0.200623 0.32501 0.341208 0.31651 0.33495 2 0.74107 0.70361 0.04171907 5 0.75797 0.72619 0.0317830 0.096083 5.0888e-01 insignificant 1 1.0000000 insignificant 0.040243 0.82511187 weaklyHypermeth 1 1.00000 insignificant 0.0383671 0.252898 lowCoverage 1 lowCoverage 0.74107 0.122314 0.6379677 5 0.75797 0.121518 0.6364524 7.3408e-36 1.000000 hypermethylated 8.1565e-34 1 hypermethylated 2.4181e-11 1.000000 hypermethylated 3.0226e-09 1 hypermethylated 0.592100 1.4015e-04 lowCoverage 4.8328e-03 lowCoverage 0.74107 0.395433 0.3395568 5 0.75797 0.433591 0.3243792 1.9809e-15 1.0000000 hypermethylated 2.2010e-13 1 hypermethylated 2.9500e-09 1.0000000 hypermethylated 5.8999e-07 1 hypermethylated 0.360442 7.6171e-04 lowCoverage 1.0882e-01 lowCoverage 0.70361 0.122314 0.6055299 5 0.72619 0.121518 0.6046693 1.5521e-26 1.00000 hypermethylated 1.7246e-24 1 hypermethylated 2.2429e-10 1.000000 hypermethylated 3.2042e-08 1 hypermethylated 0.553732 2.1971e-04 lowCoverage 7.3236e-03 lowCoverage 0.70361 0.395433 0.295990 5 0.72619 0.433591 0.2925962 1.3612e-11 1.0000000 hypermethylated 1.7015e-09 1 hypermethylated 5.1500e-08 1.000000 hypermethylated 2.5750e-05 1 hypermethylated 0.3220750 1.4582e-03 lowCoverage 0.1121663 lowCoverage 0.122314 0.395433 -0.342609 5 0.121518 0.433591 -0.31207316 0.99999880 4.8289e-10 hypomethylated 1.000000 3.7145e-08 hypomethylated 0.9998724 1.5395e-04 hypomethylated 1 9.1100e-03 hypomethylated -0.231657 2.4106e-02 lowCoverage 0.4111201 lowCoverage chr5 167596807 167597807 64171 ENSG00000208456 0.71570 71 5 0.71570 134 5 0.80170 54 5 0.66580 61 3 0.87960 71 6 0.59583 89 5 0.65676 64 3 0.88848 95 6 0.75661 62 5 0.79148 81 8 0.63708 139 5 0.40833 36 2 0.83762 110 6 0.83821 47 4 0.87083 69 5 0.76616 74 5 0.39557 399 2 0.61222 77 5 0.70238 53 5 0.75227 57 5 0.86571 30 2 0.90000 7 0 0.75500 59 7 0.75571 58 3 0.77814 49 4 0.77957 97 5 0.82639 58 5 0.81667 22 2 0.66426 112 7 0.79282 90 5 0.59521 86 5 0.87071 81 5 0.7004329 83 6 0.761224 44 5 0.6328431 97 5 0.750000 14 0 0.815646 63 5 0.8023604 112 5 0.692053 76 5 0.77801 93 5 0.714021 87 5 0.80000 49 5 0.81577 83 5 0.73782 0.75572 0.85582 0.77706 0.81844 0.74874 0.77913 0.85418 0.74470 0.85664 0.85292 0.64090 0.79873 0.90042 0.78501 0.82758 0.71325 0.73965 0.80192 0.83289 0.80612 0.87395 0.76553 0.84382 0.83242 0.77419 0.72689 0.82353 0.78822 0.80252 0.84206 0.74578 0.74975445 0.654822 0.6003460 0.8865546 0.735454 0.845910 0.842899 0.78236 0.771175 0.84874 0.82725 2 0.73738 0.78209 -0.02886374 5 0.72337 0.80543 -0.0820554 0.979517 1.0993e-01 insignificant 1 1.0000000 insignificant 0.977942 0.03679779 weaklyHypometh 1 1.00000 insignificant -0.0689320 0.093212 lowCoverage 1 lowCoverage 0.73790 0.726392 0.0099105 5 0.74819 0.777339 -0.0291465 1.2130e-01 0.414716 insignificant 1.0000e+00 1 insignificant 4.6995e-01 0.615632 insignificant 1.0000e+00 1 insignificant -0.029334 4.8948e-01 lowCoverage 1.0000e+00 lowCoverage 0.73738 0.765464 -0.0028094 5 0.72337 0.761314 -0.0379411 5.0896e-01 0.3690620 insignificant 1.0000e+00 1 insignificant 9.7421e-01 0.4739398 insignificant 1.0000e+00 1 insignificant -0.045555 2.6190e-01 lowCoverage 1.0000e+00 lowCoverage 0.78150 0.726392 0.0465825 5 0.78381 0.777339 0.0064706 2.7161e-01 0.73372 insignificant 1.0000e+00 1 insignificant 1.4742e-01 0.861308 insignificant 1.0000e+00 1 insignificant 0.039598 3.0879e-01 lowCoverage 1.0000e+00 lowCoverage 0.78209 0.765464 0.031551 5 0.80543 0.761314 0.0441143 3.1082e-01 0.9880210 insignificant 1.0000e+00 1 insignificant 7.8115e-01 0.947143 insignificant 1.0000e+00 1 insignificant 0.0233772 5.1449e-01 lowCoverage 1.0000000 lowCoverage 0.726392 0.764249 -0.024652 5 0.777339 0.734794 0.04254525 0.16479184 6.4981e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8030390 6.2771e-01 insignificant 1 1.0000e+00 insignificant -0.016221 6.7033e-01 lowCoverage 1.0000000 lowCoverage chr5 168079843 168080843 64185 PANK3 ENSG00000120137 0.77756 88 5 0.81709 73 5 0.86255 80 3 0.93182 125 6 0.95556 42 3 0.90750 211 5 0.70127 72 3 0.85682 46 3 0.87567 79 3 0.95778 50 3 0.89631 120 6 0.79596 37 3 0.93649 61 3 0.87500 34 3 0.71712 69 3 0.74667 27 3 0.61905 15 1 0.89926 81 3 0.65556 22 1 0.89460 143 5 0.85556 15 1 0.60185 25 1 0.80554 73 5 0.81548 55 3 0.87333 24 1 0.71045 103 5 0.76108 42 1 1.00000 23 2 0.93750 32 1 0.92585 87 5 0.89841 58 5 0.90077 166 5 0.4587625 107 5 0.180000 33 3 0.4000000 41 3 0.370915 43 3 0.399634 120 5 0.5487863 107 5 0.756899 131 3 0.82042 82 3 0.760199 97 3 0.97838 41 1 0.90056 125 3 0.91560 0.87022 0.74961 0.93939 0.90278 0.90437 0.94123 0.89205 0.84581 0.90825 0.86766 0.89899 0.90667 0.95644 0.90415 0.77778 0.79762 0.90920 0.94444 0.94431 0.80303 0.81397 0.93342 0.97727 0.71970 0.86065 0.81087 1.00000 0.97727 0.91955 0.86580 0.94362 0.15751673 0.333333 0.0757576 0.2146465 0.182533 0.219605 0.825758 0.91228 0.774662 0.90991 0.81293 1 0.86576 0.88478 -0.02164826 5 0.86170 0.81546 0.0462407 0.543235 7.4025e-02 insignificant 1 1.0000000 insignificant 0.525943 0.20278798 insignificant 1 1.00000 insignificant -0.0065051 0.868767 lowCoverage 1 lowCoverage 0.86576 0.345898 0.5536582 5 0.86170 0.446161 0.4155416 5.1808e-31 1.000000 hypermethylated 4.7098e-29 1 hypermethylated 8.3934e-09 0.999998 hypermethylated 4.6630e-07 1 hypermethylated 0.440965 7.5520e-05 lowCoverage 3.0208e-03 lowCoverage 0.86562 0.771008 0.0843546 3 0.85717 0.823948 0.0332231 4.2202e-04 0.1365277 lowCoverage 1.1723e-02 1 lowCoverage 5.2425e-02 0.1294107 lowCoverage 9.3615e-01 1 lowCoverage -0.009310 8.5304e-01 lowCoverage 1.0000e+00 lowCoverage 0.88478 0.345898 0.5721481 5 0.81546 0.446161 0.3693009 4.4193e-20 0.99989 hypermethylated 3.3995e-18 1 hypermethylated 2.4883e-07 0.999974 hypermethylated 1.3162e-05 1 hypermethylated 0.447470 3.0679e-05 lowCoverage 1.2456e-03 lowCoverage 0.88825 0.771008 0.095909 3 0.88471 0.823948 0.0607571 1.3202e-02 0.4641735 lowCoverage 2.5388e-01 1 lowCoverage 1.3496e-01 0.414568 lowCoverage 1.0000e+00 1 lowCoverage -0.0028050 9.5910e-01 lowCoverage 1.0000000 lowCoverage 0.344519 0.771008 -0.437876 3 0.437187 0.823948 -0.38676058 0.99976311 4.6871e-10 lowCoverage 1.000000 3.7145e-08 lowCoverage 0.9999948 2.3814e-05 lowCoverage 1 1.8318e-03 lowCoverage -0.450275 7.4406e-05 lowCoverage 0.0093008 lowCoverage chr5 170792348 170793348 64456 FGF18 ENSG00000156427 0.54239 184 6 0.46984 215 6 0.53104 221 5 0.66792 176 6 0.40565 111 5 0.82283 261 7 0.44860 218 6 0.53494 194 5 0.45675 234 6 0.50138 192 5 0.81529 202 6 0.40701 111 5 0.29613 313 5 0.52435 84 4 0.41263 201 5 0.57115 76 5 0.31607 143 4 0.63121 217 5 0.51530 180 6 0.67902 180 7 0.63411 76 5 0.28566 115 3 0.58397 153 5 0.74454 112 5 0.64848 90 6 0.63606 257 6 0.57728 175 6 0.56302 93 5 0.53784 219 6 0.55498 314 6 0.51060 300 6 0.83690 240 6 0.5005266 256 6 0.461217 151 6 0.7229656 342 4 0.346667 43 4 0.535955 172 6 0.6674780 354 7 0.394573 225 6 0.60063 202 6 0.346553 129 6 0.29939 141 4 0.41059 211 5 0.56701 0.52082 0.49702 0.59273 0.50761 0.72977 0.67591 0.56486 0.47274 0.69378 0.72780 0.52230 0.35429 0.56910 0.44539 0.70249 0.35113 0.54301 0.38644 0.47161 0.72956 0.26678 0.78193 0.47732 0.65247 0.49888 0.54689 0.70234 0.60019 0.40048 0.51925 0.78130 0.54537131 0.618775 0.5888893 0.3559704 0.661658 0.432828 0.340445 0.38817 0.337566 0.27864 0.36277 4 0.52640 0.57376 -0.02655279 6 0.52389 0.54567 -0.0217759 0.798001 2.7727e-01 insignificant 1 1.0000000 insignificant 0.936544 0.08662643 insignificant 1 1.00000 insignificant -0.0653118 0.202757 insignificant 1 insignificant 0.52640 0.532270 0.0160975 6 0.52389 0.570197 -0.0463063 2.9960e-02 0.038995 weaklyHypermeth 2.9960e-01 1 insignificant 4.9231e-01 0.142860 insignificant 1.0000e+00 1 insignificant -0.011660 8.6092e-01 insignificant 1.0000e+00 insignificant 0.53199 0.323789 0.2083936 6 0.58938 0.408367 0.1810107 4.7145e-10 0.8366637 hypermethylated 3.1430e-08 1 hypermethylated 1.3438e-07 0.6959284 hypermethylated 1.4931e-05 1 hypermethylated 0.117128 9.1371e-02 insignificant 1.0000e+00 insignificant 0.57369 0.531866 0.0364361 6 0.54110 0.513178 0.0279227 8.5209e-02 0.30243 insignificant 7.9634e-01 1 insignificant 4.1579e-01 0.589592 insignificant 1.0000e+00 1 insignificant 0.053652 4.4988e-01 insignificant 1.0000e+00 insignificant 0.57626 0.323789 0.222506 6 0.60251 0.408367 0.1941450 2.0314e-07 0.9838074 hypermethylated 1.0157e-05 1 hypermethylated 1.5102e-05 0.953583 hypermethylated 1.2585e-03 1 hypermethylated 0.1824398 1.9938e-02 weaklyHypermeth 0.7549200 insignificant 0.533486 0.323789 0.169211 6 0.641472 0.408367 0.23310525 0.00022273 8.4979e-01 weaklyHypermeth 0.044547 1.0000e+00 weaklyHypermeth 0.0066803 9.5541e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.128788 1.2523e-01 insignificant 1.0000000 insignificant chr5 170843099 170844099 64463 FGF18 ENSG00000156427 0.80112 136 6 0.77093 79 4 0.72903 65 4 0.79212 48 4 0.67068 30 4 0.85811 113 6 0.81318 49 4 0.87381 65 6 0.70102 64 4 0.74150 55 4 0.71988 148 6 0.75972 28 3 0.64801 98 4 0.50000 2 0 0.82696 65 4 0.58850 54 6 0.71528 33 4 0.44955 75 6 0.86505 87 6 0.78270 113 6 0.67502 62 4 0.73990 66 6 0.86447 98 4 0.88333 55 5 0.73184 100 4 0.62459 86 4 0.74557 91 6 0.41389 21 2 0.91089 64 4 0.57043 85 4 0.71958 79 6 0.80165 173 6 0.2865441 95 6 0.407803 108 6 0.6482282 205 4 0.536364 89 6 0.171978 56 4 0.5799735 105 6 0.408348 134 6 0.57082 133 6 0.598316 73 6 0.62370 106 6 0.49423 100 6 0.80465 0.84961 0.84018 0.80159 0.84464 0.79418 0.72567 0.90646 0.73611 0.92196 0.81509 0.76477 0.65267 NA 0.75189 0.71982 0.69356 0.47995 0.84425 0.81323 0.93368 0.71861 0.83293 0.82315 0.69312 0.83897 0.83712 0.62434 0.86665 0.83820 0.85576 0.80811 0.22010086 0.381910 0.8028894 0.4417989 0.321807 0.746949 0.522261 0.53183 0.586821 0.63474 0.42470 4 0.77312 0.81205 -0.04388409 6 0.64661 0.62260 0.0240039 0.955968 1.7099e-01 insignificant 1 1.0000000 insignificant 0.836100 0.55241703 insignificant 1 1.00000 insignificant 0.0069277 0.886949 lowCoverage 1 lowCoverage 0.77257 0.532725 0.2318131 6 0.58194 0.405843 0.1761015 3.2064e-08 0.999998 hypermethylated 6.0499e-07 1 hypermethylated 7.0566e-06 0.999952 hypermethylated 2.0162e-04 1 hypermethylated 0.291876 9.6653e-03 lowCoverage 1.7260e-01 lowCoverage 0.77539 0.573260 0.2029975 6 0.66468 0.490995 0.1736878 2.1824e-07 1.0000000 hypermethylated 9.9201e-06 1 hypermethylated 3.3625e-05 1.0000000 hypermethylated 2.2416e-03 1 hypermethylated 0.191274 3.6793e-03 lowCoverage 1.9425e-01 lowCoverage 0.81205 0.535168 0.2821966 6 0.62260 0.450937 0.1716644 5.5257e-08 0.99999 hypermethylated 1.0233e-06 1 hypermethylated 8.6730e-06 0.994968 hypermethylated 2.8910e-04 1 hypermethylated 0.284949 1.0116e-02 lowCoverage 1.8101e-01 lowCoverage 0.81565 0.573260 0.243468 6 0.69334 0.490995 0.2023494 5.6665e-09 1.0000000 hypermethylated 5.6665e-07 1 hypermethylated 2.2202e-05 1.000000 hypermethylated 1.6522e-03 1 hypermethylated 0.1843458 6.7322e-03 lowCoverage 0.3309528 lowCoverage 0.539658 0.573260 -0.037945 6 0.496443 0.490995 0.00544756 0.94713672 5.1307e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9866804 2.1238e-01 insignificant 1 1.0000e+00 insignificant -0.100603 2.7115e-01 insignificant 1.0000000 insignificant chr5 170887572 170888572 64470 FGF18 ENSG00000156427 0.91354 151 6 0.80034 246 5 0.77437 123 6 0.98148 95 6 0.72910 70 5 0.90891 280 6 0.87882 72 5 0.89897 130 6 0.82976 73 6 0.78673 86 4 0.75986 265 6 0.92347 34 2 0.93244 88 5 0.87451 37 3 0.94302 89 5 0.95000 19 3 0.87500 7 0 0.93680 74 5 0.68122 179 6 0.95879 255 6 0.77169 92 6 0.91797 48 5 0.80939 164 5 0.54108 92 5 0.83712 48 2 0.94325 232 5 0.93160 118 6 0.76278 45 5 0.82011 179 6 0.92704 257 6 0.92608 276 6 0.89826 291 6 0.8461030 185 6 0.849905 81 6 0.9826087 254 5 0.833333 36 3 0.485714 118 6 0.7602790 279 6 0.935987 179 6 0.93936 160 5 0.930609 83 5 0.97576 69 4 0.93207 83 5 0.89432 0.80789 0.92861 0.97031 0.82679 0.86044 0.84802 0.90713 0.93352 0.92449 0.88704 0.91412 0.92109 0.82412 0.90608 0.90656 0.85828 0.91746 0.86483 0.95399 0.90952 0.96081 0.93873 0.88781 0.83024 0.93107 0.87659 0.84134 0.92577 0.94285 0.93060 0.90984 0.89680061 0.893325 0.9962230 0.9618321 0.898800 0.733529 0.930303 0.92222 0.907083 0.95765 0.97976 2 0.90350 0.91112 -0.00599793 6 0.81779 0.80321 0.0145875 0.432643 7.1623e-01 insignificant 1 1.0000000 insignificant 0.854095 0.86584311 insignificant 1 1.00000 insignificant 0.0263249 0.499397 lowCoverage 1 lowCoverage 0.90632 0.875789 0.0214016 6 0.92225 0.736065 0.1861800 4.9273e-02 0.689790 weaklyHypermeth 4.7378e-01 1 insignificant 1.2208e-01 0.223167 insignificant 1.0000e+00 1 insignificant 0.073865 3.3775e-01 lowCoverage 1.0000e+00 lowCoverage 0.90363 0.942408 -0.0358520 6 0.81113 0.950172 -0.1390380 9.9828e-01 0.0427600 weaklyHypometh 1.0000e+00 1 insignificant 9.9344e-01 0.1192548 insignificant 1.0000e+00 1 insignificant -0.075901 1.3388e-03 lowCoverage 1.3388e-01 lowCoverage 0.91157 0.873033 0.0310839 6 0.73892 0.515246 0.2236750 8.1203e-01 0.96364 insignificant 1.0000e+00 1 insignificant 6.2113e-01 0.795092 insignificant 1.0000e+00 1 insignificant 0.047540 5.4890e-01 insignificant 1.0000e+00 insignificant 0.91152 0.942509 -0.029254 6 0.81651 0.956401 -0.1398926 9.9956e-01 0.0944766 insignificant 1.0000e+00 1 insignificant 9.9648e-01 0.441554 insignificant 1.0000e+00 1 insignificant -0.1022257 1.0957e-02 weaklyHypometh 0.4980416 insignificant 0.875789 0.942408 -0.044482 6 0.736065 0.950172 -0.21410690 0.98304751 2.3011e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7563600 2.8356e-01 insignificant 1 1.0000e+00 insignificant -0.149766 7.9240e-02 insignificant 1.0000000 insignificant chr5 170900862 170901862 64472 FGF18 ENSG00000156427 0.89845 469 7 0.63473 210 7 0.76388 208 7 0.92077 433 7 0.88433 139 7 0.90743 472 7 0.76402 202 7 0.88728 210 7 0.85187 344 7 0.79368 374 7 0.90296 238 7 0.94398 224 5 0.88395 265 7 0.91629 199 7 0.95032 394 7 0.93117 306 5 0.84866 72 5 0.69046 613 7 0.87266 220 7 0.72224 342 7 0.77083 90 7 0.76512 158 7 0.61299 183 7 0.73108 148 5 0.92419 171 7 0.92128 301 7 0.74493 163 7 0.65590 97 7 0.87857 224 7 0.93682 294 7 0.95117 245 7 0.92633 313 7 0.8500701 211 7 0.743484 195 7 0.9946663 228 5 0.834921 36 5 0.503888 189 6 0.8892675 297 7 0.814010 514 7 0.84492 347 7 0.830815 364 7 0.93581 380 7 0.92340 475 7 0.89779 0.78282 0.87077 0.92834 0.90876 0.90454 0.84553 0.89356 0.86534 0.91072 0.87885 0.93115 0.90698 0.93587 0.93314 0.89006 0.82314 0.87691 0.80935 0.92775 0.97987 0.90011 0.87940 0.91262 0.91996 0.91598 0.84605 0.83274 0.84900 0.92995 0.94988 0.91610 0.83342721 0.863369 0.9645296 0.8126033 0.666712 0.869990 0.926222 0.96455 0.930837 0.93665 0.90429 5 0.89265 0.89820 -0.01173620 7 0.68368 0.60963 0.0740492 0.944587 7.2552e-01 insignificant 1 1.0000000 insignificant 0.994045 0.41045773 insignificant 1 1.00000 insignificant 0.0301895 0.457313 insignificant 1 insignificant 0.89348 0.846886 0.0387705 7 0.75602 0.689730 0.0662877 2.8978e-02 0.895876 weaklyHypermeth 2.9271e-01 1 insignificant 2.6548e-01 0.947648 insignificant 1.0000e+00 1 insignificant 0.045741 5.4537e-01 insignificant 1.0000e+00 insignificant 0.89430 0.929327 -0.0367172 7 0.80730 0.764182 0.0431174 9.9400e-01 0.0138158 weaklyHypometh 1.0000e+00 1 insignificant 9.9729e-01 0.0027653 weaklyHypometh 1.0000e+00 1 insignificant -0.021334 5.2095e-01 insignificant 1.0000e+00 insignificant 0.89929 0.846886 0.0543776 7 0.75729 0.689730 0.0675555 7.6859e-02 0.97186 insignificant 7.4764e-01 1 insignificant 1.3024e-01 0.996107 insignificant 1.0000e+00 1 insignificant 0.015551 8.4432e-01 insignificant 1.0000e+00 insignificant 0.90101 0.929327 -0.025183 7 0.76234 0.764182 -0.0018463 9.9556e-01 0.2049023 insignificant 1.0000e+00 1 insignificant 9.8302e-01 0.355908 insignificant 1.0000e+00 1 insignificant -0.0515240 2.4414e-01 insignificant 1.0000000 insignificant 0.852659 0.930188 -0.074774 7 0.762057 0.818038 -0.05598111 0.99909642 5.1750e-02 insignificant 1.000000 6.2350e-01 insignificant 0.9868222 1.8168e-01 insignificant 1 1.0000e+00 insignificant -0.067075 3.9108e-01 insignificant 1.0000000 insignificant chr5 170958711 170959711 64478 FGF18 ENSG00000156427 0.81012 115 5 0.76483 119 6 0.55543 89 6 0.84919 66 3 0.87836 43 2 0.74037 373 7 0.86446 83 3 0.88660 118 6 0.89035 54 4 0.85952 54 5 0.79838 187 6 0.95238 16 0 0.67447 143 6 0.93939 29 3 0.79710 95 4 0.85000 14 1 0.75000 8 0 0.70647 138 4 0.79364 159 6 0.78566 269 7 0.81165 53 5 0.57386 26 2 0.59913 70 5 0.72395 54 3 0.83333 18 2 0.83510 292 7 0.74582 90 4 0.57143 20 2 0.84359 171 6 0.85302 277 6 0.81289 196 6 0.77332 203 6 0.2940148 181 6 0.571710 173 7 0.4111111 134 4 0.062500 34 2 0.656746 82 5 0.1266440 334 6 0.578673 174 6 0.75655 155 7 0.657992 72 5 0.58960 143 6 0.73342 90 5 0.81710 0.78115 0.70501 0.88521 0.82038 0.80560 0.85465 0.88235 0.82281 0.87798 0.85569 0.90741 0.72218 0.89485 0.83991 0.76132 0.87944 0.77080 0.82250 0.82767 0.80259 0.78120 0.77206 0.76880 0.72222 0.84364 0.80724 0.79324 0.86876 0.87139 0.78758 0.83667 0.32380477 0.597488 0.4351852 0.2813073 0.544519 0.153280 0.702203 0.82618 0.726097 0.67649 0.78522 0 0.83794 0.82925 -0.00424915 6 0.78821 0.75318 0.0350344 0.582055 1.1610e-01 insignificant 1 1.0000000 insignificant 0.637059 0.78167633 insignificant 1 1.00000 insignificant 0.0592448 0.130111 lowCoverage 1 lowCoverage 0.83794 0.368870 0.4330325 6 0.78821 0.373627 0.4145850 2.0816e-25 1.000000 hypermethylated 1.1564e-23 1 hypermethylated 3.3848e-10 0.999999 hypermethylated 2.8206e-08 1 hypermethylated 0.453549 4.8026e-03 lowCoverage 9.4169e-02 lowCoverage 0.83794 0.766562 0.0519228 5 0.78821 0.685072 0.1031402 7.6906e-04 0.9454892 weaklyHypermeth 1.8758e-02 1 weaklyHypermeth 1.8201e-03 0.9819274 weaklyHypermeth 6.0670e-02 1 weaklyHypermeth 0.144089 1.0866e-02 lowCoverage 4.3466e-01 lowCoverage 0.82925 0.368870 0.4619558 6 0.75318 0.373627 0.3795507 6.7040e-18 0.99982 hypermethylated 3.0473e-16 1 hypermethylated 2.7639e-07 0.999745 hypermethylated 1.3162e-05 1 hypermethylated 0.394304 8.1376e-03 lowCoverage 1.5070e-01 lowCoverage 0.82925 0.766562 0.068134 5 0.75318 0.685072 0.0681058 5.8220e-04 0.9485045 weaklyHypermeth 1.3540e-02 1 weaklyHypermeth 2.0081e-02 0.989314 weaklyHypermeth 4.1834e-01 1 insignificant 0.0848441 1.0585e-01 lowCoverage 1.0000000 lowCoverage 0.368870 0.766562 -0.367453 5 0.373627 0.685072 -0.31144485 0.99379083 1.2557e-06 hypomethylated 1.000000 5.2320e-05 hypomethylated 0.9915940 6.9894e-04 hypomethylated 1 2.4102e-02 hypomethylated -0.309460 2.2852e-02 weaklyHypometh 0.4045284 insignificant chr5 170958855 170959855 64479 FGF18 ENSG00000156427 0.81012 115 5 0.76483 119 6 0.55543 89 6 0.84919 66 3 0.87836 43 2 0.74037 373 7 0.86446 83 3 0.88660 118 6 0.89035 54 4 0.85952 54 5 0.79838 187 6 0.95238 16 0 0.67447 143 6 0.93939 29 3 0.79710 95 4 0.85000 14 1 0.75000 8 0 0.70647 138 4 0.79364 159 6 0.78566 269 7 0.81165 53 5 0.57386 26 2 0.59913 70 5 0.72395 54 3 0.83333 18 2 0.83510 292 7 0.74582 90 4 0.57143 20 2 0.84359 171 6 0.85302 277 6 0.81289 196 6 0.77332 203 6 0.2940148 181 6 0.571710 173 7 0.4111111 134 4 0.062500 34 2 0.656746 82 5 0.1266440 334 6 0.578673 174 6 0.75655 155 7 0.657992 72 5 0.58960 143 6 0.73342 90 5 0.81710 0.78115 0.70501 0.88521 0.82038 0.80560 0.85465 0.88235 0.82281 0.87798 0.85569 0.90741 0.72218 0.89485 0.83991 0.76132 0.87944 0.77080 0.82250 0.82767 0.80259 0.78120 0.77206 0.76880 0.72222 0.84364 0.80724 0.79324 0.86876 0.87139 0.78758 0.83667 0.32380477 0.597488 0.4351852 0.2813073 0.544519 0.153280 0.702203 0.82618 0.726097 0.67649 0.78522 0 0.83794 0.82925 -0.00424915 6 0.78821 0.75318 0.0350344 0.582055 1.1610e-01 insignificant 1 1.0000000 insignificant 0.637059 0.78167633 insignificant 1 1.00000 insignificant 0.0592448 0.130111 lowCoverage 1 lowCoverage 0.83794 0.368870 0.4330325 6 0.78821 0.373627 0.4145850 2.0816e-25 1.000000 hypermethylated 1.1564e-23 1 hypermethylated 3.3848e-10 0.999999 hypermethylated 2.8206e-08 1 hypermethylated 0.453549 4.8026e-03 lowCoverage 9.4169e-02 lowCoverage 0.83794 0.766562 0.0519228 5 0.78821 0.685072 0.1031402 7.6906e-04 0.9454892 weaklyHypermeth 1.8758e-02 1 weaklyHypermeth 1.8201e-03 0.9819274 weaklyHypermeth 6.0670e-02 1 weaklyHypermeth 0.144089 1.0866e-02 lowCoverage 4.3466e-01 lowCoverage 0.82925 0.368870 0.4619558 6 0.75318 0.373627 0.3795507 6.7040e-18 0.99982 hypermethylated 3.0473e-16 1 hypermethylated 2.7639e-07 0.999745 hypermethylated 1.3162e-05 1 hypermethylated 0.394304 8.1376e-03 lowCoverage 1.5070e-01 lowCoverage 0.82925 0.766562 0.068134 5 0.75318 0.685072 0.0681058 5.8220e-04 0.9485045 weaklyHypermeth 1.3540e-02 1 weaklyHypermeth 2.0081e-02 0.989314 weaklyHypermeth 4.1834e-01 1 insignificant 0.0848441 1.0585e-01 lowCoverage 1.0000000 lowCoverage 0.368870 0.766562 -0.367453 5 0.373627 0.685072 -0.31144485 0.99379083 1.2557e-06 hypomethylated 1.000000 5.2320e-05 hypomethylated 0.9915940 6.9894e-04 hypomethylated 1 2.4102e-02 hypomethylated -0.309460 2.2852e-02 weaklyHypometh 0.4045284 insignificant chr5 171061417 171062417 64494 FGF18 ENSG00000156427 0.73497 99 4 0.76122 95 5 0.63344 117 5 0.90361 84 4 0.78433 67 5 0.66301 111 3 0.72906 92 4 0.82654 107 5 0.59382 86 5 0.84776 90 5 0.90057 154 5 0.78993 83 4 0.80266 138 5 0.83730 29 1 0.67590 77 5 0.82807 52 4 0.66641 56 3 0.54621 126 4 0.84662 102 4 0.71340 141 4 0.91009 59 5 0.36071 100 3 0.87067 85 5 0.69714 41 5 0.51429 32 3 0.76300 123 5 0.73849 72 5 0.76347 72 4 0.78433 69 5 0.82997 119 5 0.85313 121 5 0.88636 133 4 0.5036482 137 5 0.579506 113 5 0.5501894 102 2 0.208333 38 2 0.743762 65 5 0.0333780 123 5 0.425947 124 4 0.57789 112 4 0.570996 114 3 0.46400 82 3 0.66962 111 4 0.81456 0.71335 0.68069 0.91765 0.87674 0.79490 0.80245 0.81643 0.74381 0.82299 0.90851 0.77961 0.80051 0.78665 0.82349 0.89760 0.70238 0.62150 0.82542 0.80783 0.88639 0.44745 0.83070 0.71034 0.75816 0.77158 0.83694 0.85717 0.89161 0.82709 0.84499 0.89611 0.21430587 0.341800 0.5655999 0.0934544 0.503813 0.029081 0.686786 0.73887 0.805183 0.59624 0.64815 1 0.78437 0.79727 -0.00969843 5 0.76738 0.78025 -0.0128755 0.848939 5.0684e-01 insignificant 1 1.0000000 insignificant 0.918010 0.36197745 insignificant 1 1.00000 insignificant 0.0066030 0.900093 lowCoverage 1 lowCoverage 0.78437 0.344291 0.4360486 5 0.76738 0.416174 0.3512045 4.4081e-14 1.000000 hypermethylated 1.1914e-12 1 hypermethylated 2.4015e-05 0.997611 hypermethylated 6.1577e-04 1 hypermethylated 0.317772 3.0859e-02 lowCoverage 4.5381e-01 lowCoverage 0.78437 0.718232 0.0886517 3 0.76738 0.536968 0.2304103 1.1864e-08 0.9984996 lowCoverage 5.9320e-07 1 lowCoverage 2.1134e-04 0.9998855 lowCoverage 1.1123e-02 1 lowCoverage 0.212552 4.3463e-03 lowCoverage 2.0697e-01 lowCoverage 0.79727 0.344291 0.4312912 5 0.78025 0.416174 0.3640800 9.7748e-10 1.00000 hypermethylated 2.3841e-08 1 hypermethylated 1.1317e-04 0.998186 hypermethylated 2.7602e-03 1 hypermethylated 0.311169 3.2940e-02 lowCoverage 4.7057e-01 lowCoverage 0.79727 0.718232 0.094631 3 0.78025 0.536968 0.2432858 6.3666e-08 0.9977144 lowCoverage 3.7462e-06 1 lowCoverage 3.9366e-04 0.999861 lowCoverage 2.1870e-02 1 lowCoverage 0.2059486 6.9500e-03 lowCoverage 0.3309528 lowCoverage 0.344291 0.718232 -0.377677 3 0.416174 0.536968 -0.12079417 0.33864533 4.6323e-03 lowCoverage 1.000000 8.1268e-02 lowCoverage 0.1254375 8.9042e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.105220 3.9656e-01 lowCoverage 1.0000000 lowCoverage chr5 172092871 172093871 64527 NEURL1B ENSG00000214357 0.72605 375 9 0.66654 566 9 0.65589 301 9 0.86930 324 9 0.70554 165 8 0.87209 566 9 0.77074 203 9 0.81932 336 8 0.68693 211 8 0.82223 195 7 0.76755 521 9 0.55589 95 6 0.82009 381 9 0.76283 110 7 0.69993 228 8 0.49839 102 4 0.39815 34 3 0.53852 432 8 0.82576 448 9 0.77730 404 9 0.80017 125 8 0.61304 212 8 0.77033 275 9 0.59728 174 10 0.62886 216 9 0.82999 675 9 0.74714 236 8 0.54226 83 6 0.83614 416 9 0.83987 752 9 0.71827 669 9 0.88841 510 9 0.0011905 564 8 0.025627 279 9 0.0048967 382 6 0.010417 123 7 0.123025 407 9 0.0072173 753 9 0.683283 310 9 0.45772 319 9 0.682403 247 9 0.56366 230 9 0.60987 269 9 0.78530 0.69268 0.66179 0.86524 0.79251 0.82514 0.73675 0.78233 0.73485 0.81253 0.82966 0.51225 0.74497 0.69688 0.66842 0.56747 0.46038 0.51527 0.87122 0.78983 0.81709 0.54516 0.80358 0.59310 0.67543 0.81384 0.72538 0.63587 0.78633 0.83158 0.84434 0.82524 0.00069573 0.014235 0.0083483 0.0210957 0.087105 0.017941 0.635347 0.39944 0.624896 0.42245 0.56825 6 0.75654 0.80014 -0.04180991 9 0.71401 0.64363 0.0703728 0.995745 1.2022e-01 insignificant 1 1.0000000 insignificant 0.992955 0.34187788 insignificant 1 1.00000 insignificant -0.0223614 0.613190 insignificant 1 insignificant 0.75642 0.026316 0.7317346 9 0.66634 0.054816 0.6115255 6.4322e-83 1.000000 hypermethylated 3.2161e-80 1 hypermethylated 3.9972e-20 1.000000 hypermethylated 1.9986e-17 1 hypermethylated 0.683222 9.0294e-16 hypermethylated 3.0098e-13 hypermethylated 0.75655 0.611636 0.1741039 9 0.72692 0.577064 0.1498546 2.3705e-10 0.9919849 weaklyHypermeth 1.6932e-08 1 weaklyHypermeth 3.2424e-06 0.9979443 weaklyHypermeth 2.9477e-04 1 weaklyHypermeth 0.112563 5.7343e-02 insignificant 1.0000e+00 insignificant 0.80046 0.026316 0.7759415 9 0.70924 0.054816 0.6544239 2.2521e-80 1.00000 hypermethylated 1.1260e-77 1 hypermethylated 1.0798e-18 1.000000 hypermethylated 5.3990e-16 1 hypermethylated 0.705584 3.9171e-12 hypermethylated 1.9586e-09 hypermethylated 0.80083 0.611636 0.209768 9 0.77372 0.577064 0.1966529 9.2004e-15 0.9996840 hypermethylated 1.5334e-12 1 hypermethylated 1.3236e-06 0.999536 hypermethylated 1.6772e-04 1 hypermethylated 0.1349247 3.1947e-02 weaklyHypermeth 0.9127603 insignificant 0.025938 0.611636 -0.575173 9 0.014345 0.577064 -0.56271863 1.00000000 4.8728e-37 hypomethylated 1.000000 2.4364e-34 hypomethylated 1.0000000 1.8532e-12 hypomethylated 1 9.2661e-10 hypomethylated -0.570659 2.6988e-05 hypomethylated 0.0059617 hypomethylated chr5 172356488 172357488 64530 ATP6V0E1 ENSG00000113732 0.80270 138 5 0.64662 159 6 0.81907 116 4 0.75802 123 5 0.85863 74 4 0.75792 253 5 0.72356 72 4 0.74868 113 5 0.85357 81 4 0.73386 90 4 0.61058 193 6 0.57449 44 4 0.92533 129 5 0.87524 49 3 0.75786 102 3 0.58796 61 3 0.58078 564 6 0.88339 127 5 0.79706 111 5 0.81554 189 8 0.84626 53 7 0.64384 58 5 0.84733 89 5 0.57991 57 5 0.88333 37 4 0.78427 216 5 0.78455 48 4 0.71250 22 3 0.83672 170 5 0.78618 258 5 0.58196 244 6 0.69000 226 6 0.7850951 141 6 0.601716 70 5 0.5175189 81 5 0.733333 14 1 0.812099 59 5 0.5183013 223 5 0.732695 135 5 0.82714 114 5 0.869599 95 6 0.88228 92 5 0.84284 136 5 0.79347 0.71911 0.81821 0.84290 0.90335 0.85608 0.82175 0.78145 0.81118 0.84372 0.77737 0.77202 0.83456 0.82531 0.86215 0.89472 0.68934 0.92048 0.86024 0.86219 0.94580 0.78618 0.84853 0.69241 0.92325 0.78428 0.71806 0.67171 0.83275 0.82067 0.80737 0.80145 0.72623877 0.698078 0.5311752 0.8138706 0.771782 0.699713 0.805337 0.79697 0.891082 0.90655 0.85229 3 0.79197 0.79770 -0.00580103 5 0.72652 0.73199 -0.0054683 0.798206 5.5487e-01 insignificant 1 1.0000000 insignificant 0.547962 0.75992898 insignificant 1 1.00000 insignificant 0.0074730 0.848093 lowCoverage 1 lowCoverage 0.79197 0.693878 0.0934440 5 0.72652 0.647986 0.0785355 3.5587e-04 0.979230 weaklyHypermeth 4.6217e-03 1 weaklyHypermeth 1.4080e-02 0.971398 weaklyHypermeth 1.8773e-01 1 insignificant 0.094200 1.5505e-01 lowCoverage 1.0000e+00 lowCoverage 0.79197 0.844406 -0.0408988 5 0.72652 0.804201 -0.0776791 9.4029e-01 0.0153190 weaklyHypometh 1.0000e+00 1 insignificant 9.0442e-01 0.0434709 weaklyHypometh 1.0000e+00 1 insignificant -0.075368 5.6670e-02 lowCoverage 1.0000e+00 lowCoverage 0.79770 0.693878 0.0963959 5 0.73199 0.647986 0.0840038 2.7271e-04 0.92910 weaklyHypermeth 3.6362e-03 1 weaklyHypermeth 3.4271e-02 0.864497 weaklyHypermeth 4.0318e-01 1 insignificant 0.086727 1.9854e-01 lowCoverage 1.0000e+00 lowCoverage 0.79770 0.844406 -0.032641 5 0.73199 0.804201 -0.0722108 9.4911e-01 0.0390103 weaklyHypometh 1.0000e+00 1 insignificant 9.8796e-01 0.074602 insignificant 1.0000e+00 1 insignificant -0.0828410 5.9549e-02 insignificant 1.0000000 insignificant 0.693878 0.844406 -0.131491 5 0.647986 0.804201 -0.15621462 0.99917570 1.0301e-03 weaklyHypometh 1.000000 1.9437e-02 weaklyHypometh 0.9975847 1.4451e-03 weaklyHypometh 1 4.8169e-02 weaklyHypometh -0.169568 2.5369e-02 lowCoverage 0.4177292 lowCoverage chr5 173804361 173805361 64582 ENSG00000170091 0.94429 228 6 0.93568 87 3 0.84508 57 3 0.93008 236 6 0.89286 30 2 0.94087 217 6 0.83915 76 3 0.96561 57 3 0.72510 51 3 0.83810 32 3 0.95680 118 3 0.94444 35 1 0.80741 40 2 1.00000 3 0 0.95062 49 3 0.99099 50 2 0.80625 51 2 0.77222 148 6 0.95185 90 6 0.86948 153 6 0.95238 24 2 0.82828 17 1 0.96939 69 3 0.94781 49 3 0.77546 91 2 0.91870 213 6 0.89091 35 2 0.84242 18 2 0.80093 73 3 0.85498 154 6 0.91383 147 6 0.95609 230 6 0.0087719 126 3 0.022222 52 3 0.0000000 133 5 0.320164 261 7 0.021233 126 3 0.1439454 324 6 0.838265 243 6 0.81660 267 6 0.878096 259 6 0.78488 123 6 0.85207 294 7 0.87390 0.92188 0.83941 0.93572 0.88605 0.87419 0.80448 0.95843 0.73953 0.84660 0.95025 0.91468 0.81871 0.91467 0.92416 0.98616 0.82381 0.59565 0.87434 0.83490 0.92687 0.84740 0.89031 0.92905 0.74405 0.86137 0.85271 0.79848 0.73925 0.85717 0.89142 0.91071 0.01347118 0.020635 0.0061069 0.1043956 0.013169 0.076594 0.692286 0.79465 0.686240 0.60682 0.80470 2 0.88704 0.90089 -0.00876758 3 0.92249 0.90736 0.0151270 0.794894 3.4096e-01 lowCoverage 1 1.0000000 lowCoverage 0.748096 0.53716043 lowCoverage 1 1.00000 lowCoverage 0.0077457 0.765575 lowCoverage 1 lowCoverage 0.88704 0.130137 0.7894410 3 0.92249 0.210891 0.7115977 7.9250e-54 0.999999 lowCoverage 1.9812e-51 1 lowCoverage 3.6545e-11 1.000000 lowCoverage 4.0606e-09 1 lowCoverage 0.809288 4.5662e-06 lowCoverage 2.8539e-04 lowCoverage 0.88704 0.799325 0.1228424 3 0.92249 0.841497 0.0809917 1.5847e-06 0.9952331 lowCoverage 6.6028e-05 1 lowCoverage 1.8830e-03 0.9985547 lowCoverage 6.0740e-02 1 lowCoverage 0.061362 1.9633e-02 lowCoverage 5.6095e-01 lowCoverage 0.90089 0.130137 0.7890517 6 0.90736 0.210891 0.6964707 1.6204e-44 1.00000 hypermethylated 5.4014e-42 1 hypermethylated 7.0224e-10 1.000000 hypermethylated 7.8027e-08 1 hypermethylated 0.801542 3.8077e-06 lowCoverage 2.5385e-04 lowCoverage 0.90089 0.799325 0.122674 6 0.90736 0.841497 0.0658647 1.3626e-06 0.9902129 weaklyHypermeth 6.1935e-05 1 weaklyHypermeth 4.5890e-04 0.994474 weaklyHypermeth 2.2945e-02 1 weaklyHypermeth 0.0536167 4.8305e-02 lowCoverage 1.0000000 lowCoverage 0.130137 0.799325 -0.675167 6 0.210891 0.841497 -0.63060601 0.99999993 1.0182e-26 hypomethylated 1.000000 2.5455e-24 hypomethylated 1.0000000 1.2057e-07 hypomethylated 1 2.4114e-05 hypomethylated -0.747926 9.7742e-06 lowCoverage 0.0052562 lowCoverage chr5 175688944 175689944 64650 C5orf25 ENSG00000170085 0.79607 171 5 0.76494 105 5 0.72833 63 5 0.75922 82 5 0.82641 44 4 0.84179 149 5 0.84648 66 5 0.85493 53 4 0.68952 27 4 0.75996 56 5 0.72895 112 5 0.65263 54 5 0.87142 65 4 NA 0 0 0.71453 68 5 0.85000 32 3 0.73455 41 4 0.80662 104 5 0.76199 77 5 0.81462 130 5 0.85333 21 3 0.61429 30 5 0.80508 108 5 0.76786 24 3 0.92500 37 5 0.80909 96 5 0.92308 46 3 0.92500 33 3 0.77051 39 3 0.81677 88 5 0.73352 95 5 0.81977 231 5 0.8787546 41 3 0.784199 66 5 0.6306561 76 5 0.881585 59 5 0.910000 37 3 0.7000000 146 5 0.803127 185 5 0.85516 161 5 0.798294 132 5 0.87794 164 5 0.83803 134 5 0.84858 0.77259 0.74070 0.81420 0.83789 0.83855 0.85849 0.83577 0.71776 0.79819 0.78245 0.69678 0.84565 NA 0.72614 0.88953 0.70937 0.80526 0.77776 0.81789 0.80568 0.53378 0.81221 0.74594 0.90310 0.83577 0.89505 0.89535 0.74757 0.82513 0.77372 0.83862 0.83490928 0.731879 0.6163141 0.8421604 0.882171 0.703618 0.829433 0.86535 0.826448 0.89459 0.85800 3 0.78719 0.81132 -0.02161323 5 0.77791 0.80887 -0.0309663 0.848629 4.1430e-02 weaklyHypometh 1 1.0000000 insignificant 0.748132 0.00874103 weaklyHypometh 1 1.00000 insignificant -0.0345048 0.258336 lowCoverage 1 lowCoverage 0.78719 0.748235 0.0427430 5 0.77791 0.761802 0.0161054 8.8149e-03 0.377596 weaklyHypermeth 9.4784e-02 1 weaklyHypermeth 2.6768e-01 0.096052 insignificant 1.0000e+00 1 insignificant -0.018430 7.1579e-01 lowCoverage 1.0000e+00 lowCoverage 0.78719 0.832474 -0.0577177 5 0.77791 0.834490 -0.0565827 9.9065e-01 0.0042943 weaklyHypometh 1.0000e+00 1 insignificant 9.5635e-01 0.0040222 weaklyHypometh 1.0000e+00 1 insignificant -0.055406 2.0632e-02 lowCoverage 5.7312e-01 lowCoverage 0.81132 0.748235 0.0620041 5 0.80887 0.761802 0.0470717 3.5674e-02 0.93165 weaklyHypermeth 3.6402e-01 1 insignificant 2.8462e-01 0.767627 insignificant 1.0000e+00 1 insignificant 0.016075 7.6877e-01 lowCoverage 1.0000e+00 lowCoverage 0.81132 0.832474 -0.034273 5 0.80887 0.834490 -0.0256164 8.5492e-01 0.1447003 insignificant 1.0000e+00 1 insignificant 5.5967e-01 0.207201 insignificant 1.0000e+00 1 insignificant -0.0209013 4.9720e-01 lowCoverage 1.0000000 lowCoverage 0.748235 0.832474 -0.097082 5 0.761802 0.834490 -0.07268807 0.93801092 9.1969e-03 weaklyHypometh 1.000000 1.4261e-01 insignificant 0.5533260 1.4460e-01 insignificant 1 1.0000e+00 insignificant -0.036977 4.7510e-01 lowCoverage 1.0000000 lowCoverage chr5 176211660 176212660 64671 UNC5A ENSG00000113763 0.77339 259 10 0.75383 193 10 0.73558 209 6 0.83079 243 8 0.88992 136 5 0.87564 413 10 0.64935 154 6 0.85303 165 10 0.69629 145 8 0.87490 141 8 0.83722 394 10 0.82830 75 5 0.82200 220 8 0.73037 97 4 0.87423 194 6 0.76316 51 2 0.57500 18 3 0.78005 338 9 0.79992 291 10 0.84645 365 6 0.88439 149 9 0.58770 124 10 0.57901 145 5 0.57341 135 6 0.82827 138 8 0.86966 281 10 0.79654 216 8 0.80506 99 5 0.82697 246 10 0.89639 302 10 0.83519 319 10 0.84846 398 8 0.4950883 226 10 0.308041 259 10 0.2183155 379 9 0.287842 61 4 0.456226 209 9 0.3010443 513 10 0.587598 208 10 0.60370 379 10 0.701742 174 7 0.72915 207 6 0.47687 291 10 0.82387 0.74890 0.73458 0.86046 0.87751 0.84906 0.74568 0.83965 0.84485 0.86093 0.84460 0.84829 0.85206 0.88283 0.81442 0.85289 0.75015 0.78423 0.84966 0.85680 0.86733 0.60175 0.80702 0.82850 0.87176 0.86881 0.85781 0.89605 0.83748 0.87180 0.81801 0.85777 0.42383526 0.261171 0.1620791 0.4024840 0.392734 0.248855 0.695824 0.68682 0.746926 0.83011 0.57041 4 0.82687 0.83699 -0.01136163 10 0.80030 0.77181 0.0284845 0.950542 2.5695e-01 insignificant 1 1.0000000 insignificant 0.781039 0.75539494 insignificant 1 1.00000 insignificant 0.0118851 0.769558 insignificant 1 insignificant 0.82703 0.267922 0.5429156 10 0.82760 0.263348 0.5642471 6.0298e-55 1.000000 hypermethylated 2.0099e-52 1 hypermethylated 1.3173e-16 1.000000 hypermethylated 4.3909e-14 1 hypermethylated 0.445045 3.6906e-05 hypermethylated 1.7574e-03 hypermethylated 0.82699 0.671168 0.1534418 10 0.81035 0.592388 0.2179670 1.2480e-17 1.0000000 weaklyHypermeth 2.0800e-15 1 weaklyHypermeth 2.0547e-08 0.9999723 weaklyHypermeth 3.2020e-06 1 weaklyHypermeth 0.169660 1.5244e-02 weaklyHypermeth 4.7636e-01 insignificant 0.83673 0.267922 0.5634970 10 0.75107 0.263348 0.4877185 2.1743e-40 1.00000 hypermethylated 4.3487e-38 1 hypermethylated 1.3216e-13 1.000000 hypermethylated 4.4052e-11 1 hypermethylated 0.433160 7.4295e-06 hypermethylated 3.9102e-04 hypermethylated 0.83706 0.671168 0.178446 10 0.82617 0.592388 0.2337855 2.0518e-16 1.0000000 weaklyHypermeth 1.0259e-13 1 weaklyHypermeth 1.0316e-06 0.999717 weaklyHypermeth 1.6772e-04 1 weaklyHypermeth 0.1577754 2.1738e-02 weaklyHypermeth 0.7549200 insignificant 0.268085 0.671168 -0.374388 10 0.289683 0.592388 -0.30270485 0.99999972 1.5849e-11 hypomethylated 1.000000 1.5849e-09 hypomethylated 0.9997295 5.4836e-07 hypomethylated 1 9.1394e-05 hypomethylated -0.275384 1.8293e-03 weaklyHypometh 0.0653336 weaklyHypometh chr5 176226269 176227269 64673 UNC5A ENSG00000113763 0.34613 549 11 0.37149 529 11 0.40165 299 11 0.27314 641 11 0.27523 176 11 0.32506 590 11 0.42503 243 11 0.31227 418 11 0.29554 313 11 0.35444 232 11 0.45711 519 11 0.26599 104 11 0.21398 487 11 0.23356 102 3 0.24322 344 11 0.24664 84 8 0.25930 129 9 0.28310 767 11 0.36780 406 11 0.25405 590 11 0.41020 231 11 0.12549 502 11 0.38338 311 11 0.26284 252 11 0.40802 170 11 0.42791 688 11 0.41690 316 11 0.49785 129 9 0.34667 458 11 0.29260 648 11 0.25149 592 11 0.63654 434 11 0.0796351 423 11 0.100257 290 11 0.2082243 156 5 0.069650 118 9 0.094024 326 11 0.1670117 524 11 0.058487 761 11 0.10985 724 11 0.071826 607 11 0.10748 706 11 0.10156 595 11 0.38747 0.39734 0.44292 0.30683 0.32000 0.37601 0.45637 0.35582 0.31934 0.39951 0.49471 0.30676 0.24640 0.35777 0.27586 0.29159 0.26787 0.30590 0.40577 0.29510 0.49609 0.14874 0.42092 0.27801 0.43839 0.45594 0.44158 0.53706 0.37862 0.33572 0.29663 0.65345 0.09226381 0.105200 0.1671606 0.0806043 0.104744 0.183761 0.071841 0.11987 0.085735 0.13206 0.11799 11 0.31029 0.34412 -0.03282551 11 0.32093 0.35150 -0.0305658 0.997237 8.6987e-02 insignificant 1 1.0000000 insignificant 0.999894 0.00472252 weaklyHypometh 1 0.95233 insignificant -0.0614202 0.152609 insignificant 1 insignificant 0.31029 0.103542 0.2187583 11 0.32093 0.116194 0.2047387 2.7873e-25 0.999997 hypermethylated 1.4670e-23 1 hypermethylated 2.4027e-14 1.000000 hypermethylated 4.8914e-12 1 hypermethylated 0.190436 3.5590e-05 weaklyHypermeth 1.7574e-03 weaklyHypermeth 0.31029 0.083996 0.2294702 11 0.32093 0.091298 0.2296350 7.4515e-30 1.0000000 hypermethylated 7.4515e-27 1 hypermethylated 4.0687e-18 1.0000000 hypermethylated 4.0687e-15 1 hypermethylated 0.220395 1.3540e-10 hypermethylated 1.3540e-07 hypermethylated 0.34405 0.103430 0.2525749 11 0.32221 0.106512 0.2156958 2.3825e-16 1.00000 hypermethylated 9.5300e-15 1 hypermethylated 3.7801e-13 1.000000 hypermethylated 9.4503e-11 1 hypermethylated 0.251857 3.2387e-05 hypermethylated 1.2456e-03 hypermethylated 0.34412 0.083996 0.263431 11 0.35150 0.091298 0.2602007 1.5882e-18 1.0000000 hypermethylated 1.5882e-15 1 hypermethylated 4.9621e-17 1.000000 hypermethylated 4.9621e-14 1 hypermethylated 0.2818154 8.5396e-06 hypermethylated 0.0085396 hypermethylated 0.103542 0.083996 0.025072 11 0.116194 0.091298 0.02489626 0.14367194 7.9489e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6346700 6.9307e-01 insignificant 1 1.0000e+00 insignificant 0.029959 2.6656e-01 insignificant 1.0000000 insignificant chr5 176890902 176891902 64686 DDX41 ENSG00000183258 0.95595 782 8 0.90340 272 8 0.94971 261 8 0.96117 398 8 0.87205 211 8 0.87413 664 8 0.82538 264 8 0.93241 178 8 0.97333 85 8 0.78551 252 8 0.88157 340 8 0.91812 195 8 0.89993 139 8 0.85616 209 8 0.87881 210 8 0.96094 202 8 NA 0 0 0.75601 914 8 0.95824 482 8 0.88224 518 8 0.78125 83 7 0.99206 86 7 0.74999 320 8 0.80000 44 4 0.91667 49 7 0.95917 268 8 0.58930 176 4 0.97007 94 7 0.96732 271 8 0.96911 387 8 0.91257 304 8 0.97913 406 8 0.8904307 296 8 0.870067 457 8 0.9598288 484 8 1.000000 1 0 0.664853 227 8 0.8085011 442 8 0.872323 712 8 0.95027 565 8 0.858776 449 8 0.97944 1213 8 0.93763 555 8 0.95668 0.94098 0.93277 0.95030 0.98634 0.96059 0.96336 0.94381 0.96010 0.97728 0.97104 0.93177 0.94852 0.96221 0.97862 0.99102 NA 0.93760 0.95754 0.97277 0.90703 0.98554 0.94362 0.96365 0.91328 0.95134 0.86741 0.96425 0.97710 0.95665 0.94973 0.96560 0.87647694 0.812952 0.9400471 NA 0.859337 0.921799 0.957686 0.94036 0.950526 0.97351 0.96218 5 0.95598 0.95257 0.00335315 8 0.80719 0.82575 -0.0185573 0.388204 9.8260e-01 insignificant 1 1.0000000 insignificant 0.761987 0.90991546 insignificant 1 1.00000 insignificant 0.0138361 0.726127 insignificant 1 insignificant 0.95618 0.893550 0.0640821 8 0.78463 0.654747 0.1298867 6.8718e-05 0.765488 weaklyHypermeth 9.5442e-04 1 weaklyHypermeth 5.5230e-02 0.945430 insignificant 6.2056e-01 1 insignificant 0.030443 5.7045e-01 insignificant 1.0000e+00 insignificant 0.95592 0.959610 -0.0022403 8 0.74507 0.884467 -0.1393978 8.4304e-01 0.6667731 insignificant 1.0000e+00 1 insignificant 8.4467e-01 0.8498340 insignificant 1.0000e+00 1 insignificant -0.023632 4.1127e-01 insignificant 1.0000e+00 insignificant 0.95400 0.894488 0.0635480 8 0.90386 0.800247 0.1036110 5.8648e-03 0.78906 weaklyHypermeth 6.9819e-02 1 weaklyHypermeth 1.0782e-01 0.849033 insignificant 1.0000e+00 1 insignificant 0.016607 7.8944e-01 insignificant 1.0000e+00 insignificant 0.95405 0.959564 -0.004934 8 0.92134 0.852958 0.0683797 8.8569e-01 0.6984553 insignificant 1.0000e+00 1 insignificant 5.9881e-01 0.958763 insignificant 1.0000e+00 1 insignificant -0.0374682 3.9671e-01 insignificant 1.0000000 insignificant 0.893550 0.959851 -0.066015 8 0.654747 0.898413 -0.24366568 0.93896066 2.5634e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9253554 2.2270e-01 insignificant 1 1.0000e+00 insignificant -0.054075 3.4921e-01 insignificant 1.0000000 insignificant chr5 178673427 178674427 64708 ZNF354C ENSG00000177932 0.85592 663 21 0.74499 601 20 0.81806 432 21 0.92683 750 21 0.76723 167 18 0.83128 963 22 0.69536 132 12 0.86569 582 21 0.85047 302 21 0.85557 391 17 0.91910 886 21 0.77167 71 6 0.84336 672 22 0.79083 201 9 0.85493 323 21 0.50000 17 0 0.75556 19 2 0.79527 1035 22 0.90480 651 21 0.87559 962 22 0.86606 327 21 0.91460 574 19 0.82337 347 20 0.71725 287 19 0.92253 566 21 0.94337 908 21 0.83127 344 19 0.77540 52 1 0.88520 738 21 0.88473 971 21 0.89751 898 22 0.84776 1295 22 0.2839436 742 21 0.352896 645 22 0.2881611 966 21 0.392340 184 12 0.271047 427 21 0.4667775 1257 22 0.880233 182 13 0.92160 603 22 0.854598 398 21 0.87286 402 21 0.68154 393 19 0.89681 0.71669 0.83926 0.90511 0.78476 0.83700 0.70054 0.85733 0.82483 0.89302 0.90898 0.82348 0.92179 0.90164 0.93411 0.70696 0.67145 0.81431 0.89964 0.85708 0.86074 0.91367 0.88625 0.90038 0.91238 0.94021 0.90952 0.79263 0.91116 0.91644 0.90058 0.91532 0.20985436 0.224122 0.2356823 0.3687779 0.229562 0.442089 0.863954 0.92983 0.867309 0.92897 0.69737 4 0.87663 0.92225 -0.04003034 21 0.77811 0.79369 -0.0155790 1.000000 1.0312e-06 weaklyHypometh 1 0.0010312 weaklyHypometh 1.000000 0.00031732 weaklyHypometh 1 0.31732 insignificant -0.0479640 0.101149 insignificant 1 insignificant 0.87672 0.395922 0.3888020 21 0.80720 0.328814 0.4783813 1.1601e-109 0.999290 hypermethylated 1.1601e-106 1 hypermethylated 2.2408e-29 0.999639 hypermethylated 2.2408e-26 1 hypermethylated 0.468595 2.0260e-07 hypermethylated 1.5584e-05 hypermethylated 0.87658 0.894284 -0.0179630 21 0.77948 0.817979 -0.0384958 9.9001e-01 0.0082711 weaklyHypometh 1.0000e+00 1 insignificant 9.8446e-01 0.0221933 weaklyHypometh 1.0000e+00 1 insignificant -0.031043 5.3025e-01 insignificant 1.0000e+00 insignificant 0.92247 0.395828 0.4167833 21 0.83551 0.328814 0.5066971 1.4261e-117 1.00000 hypermethylated 1.4261e-114 1 hypermethylated 7.8111e-26 1.000000 hypermethylated 7.8111e-23 1 hypermethylated 0.516559 2.6576e-07 hypermethylated 2.2147e-05 hypermethylated 0.92246 0.893778 0.022542 21 0.82893 0.777979 0.0509526 2.4607e-02 0.9469450 weaklyHypermeth 4.3170e-01 1 insignificant 2.6836e-01 0.658106 insignificant 1.0000e+00 1 insignificant 0.0169214 7.2427e-01 insignificant 1.0000000 insignificant 0.395922 0.893778 -0.421145 21 0.341966 0.777979 -0.43601238 1.00000000 2.1043e-42 hypomethylated 1.000000 2.1043e-39 hypomethylated 1.0000000 4.1270e-18 hypomethylated 1 4.1270e-15 hypomethylated -0.499638 1.3620e-05 hypomethylated 0.0052562 hypomethylated chr5 178685469 178686469 64709 ZNF354C ENSG00000177932 0.66615 180 7 0.67038 192 8 0.55258 178 7 0.75006 174 6 0.48283 87 6 0.59255 212 7 0.57757 124 6 0.60774 103 6 0.50842 94 5 0.63448 58 4 0.67033 131 7 0.69481 49 2 0.59607 59 5 0.75294 52 4 0.58510 63 4 0.56633 41 4 0.16667 6 0 0.47357 290 6 0.66299 104 4 0.62462 218 8 0.46667 48 5 0.36111 19 2 0.58778 93 8 0.41429 40 2 0.38095 51 3 0.75230 218 7 0.46962 69 6 0.30204 38 4 0.62519 118 4 0.57647 207 7 0.61771 274 7 0.75651 201 7 0.2239488 179 8 0.283159 138 6 0.3361111 113 4 0.541667 19 0 0.161478 169 7 0.3888190 236 7 0.499128 201 6 0.57968 171 6 0.551446 220 4 0.66602 81 2 0.47954 189 5 0.68451 0.57826 0.66208 0.66505 0.54335 0.51860 0.52377 0.68437 0.47018 0.61304 0.62540 0.60709 0.64382 0.65204 0.55847 0.46489 NA 0.48992 0.55244 0.56876 0.50847 0.41808 0.43673 0.48946 0.42938 0.69886 0.33827 0.28959 0.59990 0.64255 0.58133 0.73874 0.28099323 0.311976 0.4665254 0.5423729 0.204250 0.553125 0.549535 0.55252 0.533786 0.43944 0.41595 0 0.50600 0.50291 -0.01317682 6 0.63118 0.57333 0.0578446 0.619569 4.4946e-01 insignificant 1 1.0000000 insignificant 0.243050 0.94869685 insignificant 1 1.00000 insignificant 0.0659228 0.216189 insignificant 1 insignificant 0.50600 0.214286 0.2573841 6 0.63118 0.240433 0.3907431 1.6880e-20 0.999997 hypermethylated 6.2519e-19 1 hypermethylated 6.6475e-06 0.999998 hypermethylated 1.9551e-04 1 hypermethylated 0.269279 2.4611e-03 weaklyHypermeth 5.7235e-02 weaklyHypermeth 0.50580 0.293503 0.1404167 4 0.62723 0.600291 0.0269422 5.7286e-03 0.7731566 lowCoverage 1.1017e-01 1 lowCoverage 1.5482e-02 0.8160140 lowCoverage 3.0963e-01 1 lowCoverage 0.036644 4.1724e-01 lowCoverage 1.0000e+00 lowCoverage 0.50291 0.214286 0.2546019 7 0.57333 0.240433 0.3328985 7.5640e-15 0.99995 hypermethylated 2.5213e-13 1 hypermethylated 7.6386e-04 0.998098 hypermethylated 1.4978e-02 1 hypermethylated 0.203356 1.3778e-02 weaklyHypermeth 2.3353e-01 insignificant 0.50291 0.293503 0.160542 4 0.58148 0.600291 -0.0188111 1.1573e-03 0.6947397 lowCoverage 2.5158e-02 1 lowCoverage 1.6903e-01 0.665179 lowCoverage 1.0000e+00 1 lowCoverage -0.0292788 5.9852e-01 lowCoverage 1.0000000 lowCoverage 0.213866 0.293503 -0.098056 4 0.230111 0.600291 -0.37017980 0.99809731 8.9180e-07 lowCoverage 1.000000 4.0536e-05 lowCoverage 0.9999984 5.8804e-03 lowCoverage 1 1.3068e-01 lowCoverage -0.232635 6.6076e-03 lowCoverage 0.1835458 lowCoverage chr5 178775925 178776925 64712 ADAMTS2 ENSG00000087116 0.94605 115 4 0.73701 129 5 0.84148 184 5 0.83309 128 5 0.75447 55 5 0.82181 156 5 0.87694 120 5 0.77749 91 5 0.80384 78 4 0.90738 107 5 0.89927 95 8 0.74143 80 5 0.67904 124 4 0.89660 72 3 0.71778 100 5 0.90485 57 4 0.72500 26 4 0.31432 224 4 0.85574 70 5 0.74364 144 5 0.69717 51 5 0.36941 115 5 0.73091 124 4 0.89931 65 5 0.87711 60 4 0.89038 166 8 0.78613 50 4 0.79524 65 4 0.83638 74 5 0.78794 159 5 0.74892 184 5 0.92084 205 4 0.5315864 210 8 0.360727 76 5 0.0000000 12 1 0.336806 62 5 0.398309 68 5 0.4257260 156 5 0.607112 155 5 0.53389 96 5 0.497000 186 5 0.29231 29 3 0.35643 173 5 0.91196 0.76114 0.74255 0.83959 0.71482 0.83995 0.76796 0.77891 0.81979 0.88076 0.82886 0.77059 0.78812 0.89021 0.77381 0.81932 0.73290 0.61926 0.91857 0.78599 0.76308 0.33921 0.84428 0.79871 0.78521 0.81855 0.82005 0.80918 0.83403 0.81960 0.81398 0.90626 0.43308876 0.384018 NA 0.0040258 0.649127 0.112345 0.375693 0.58350 0.457319 0.51326 0.45919 4 0.79796 0.79331 0.00664412 5 0.73941 0.67868 0.0607246 0.700655 8.7507e-01 insignificant 1 1.0000000 insignificant 0.762028 0.85296471 insignificant 1 1.00000 insignificant 0.0105504 0.841597 lowCoverage 1 lowCoverage 0.79860 0.371134 0.4581077 5 0.84816 0.445308 0.4028569 7.3358e-26 0.999541 hypermethylated 4.5849e-24 1 hypermethylated 3.2054e-09 1.000000 hypermethylated 2.4657e-07 1 hypermethylated 0.446668 9.1491e-04 lowCoverage 2.4077e-02 lowCoverage 0.79777 0.478056 0.3276210 5 0.71335 0.491313 0.2220347 8.1051e-18 0.9992753 hypermethylated 1.6210e-15 1 hypermethylated 1.7122e-07 0.9997925 hypermethylated 1.7122e-05 1 hypermethylated 0.331514 1.9157e-03 lowCoverage 1.4736e-01 lowCoverage 0.79847 0.369863 0.4413644 5 0.84655 0.400777 0.4457741 1.3194e-16 0.99997 hypermethylated 5.4973e-15 1 hypermethylated 4.6768e-08 1.000000 hypermethylated 4.2517e-06 1 hypermethylated 0.436118 7.6760e-04 lowCoverage 2.1322e-02 lowCoverage 0.79421 0.477308 0.319607 5 0.70899 0.446649 0.2623373 1.7701e-07 0.9999999 hypermethylated 9.3162e-06 1 hypermethylated 1.9644e-04 1.000000 hypermethylated 1.3089e-02 1 hypermethylated 0.3209634 1.7811e-03 lowCoverage 0.1243267 lowCoverage 0.370497 0.480315 -0.125168 5 0.445308 0.545904 -0.10059603 0.97977549 6.3795e-03 weaklyHypometh 1.000000 1.0813e-01 insignificant 0.9987946 9.1085e-02 insignificant 1 1.0000e+00 insignificant -0.115154 2.5156e-01 lowCoverage 1.0000000 lowCoverage chr5 178797212 178798212 64713 ADAMTS2 ENSG00000087116 0.70751 186 10 0.71609 207 13 0.75986 305 10 0.85449 194 8 0.82379 112 9 0.84440 314 11 0.83522 195 9 0.81761 158 10 0.80516 195 11 0.87860 169 9 0.84049 345 12 0.55482 168 10 0.80711 271 12 0.89369 86 4 0.87866 209 10 0.78627 131 7 0.56376 80 7 0.80312 271 8 0.86289 175 13 0.78670 214 10 0.70423 174 13 0.72202 101 6 0.64624 174 10 0.81349 103 9 0.61905 67 4 0.84047 212 12 0.75461 109 10 0.81214 109 7 0.78031 105 10 0.84438 188 11 0.84922 209 13 0.86065 270 13 0.4445131 248 13 0.544874 181 12 0.5825687 183 8 0.474537 53 4 0.551501 174 11 0.2890599 262 13 0.786416 204 9 0.62473 247 13 0.641486 144 7 0.58934 158 11 0.61471 190 9 0.78756 0.77078 0.85904 0.85454 0.87431 0.91771 0.85679 0.85727 0.87983 0.89757 0.88651 0.74679 0.82647 0.85621 0.89642 0.92391 0.78803 0.84545 0.89049 0.88677 0.90882 0.67255 0.87532 0.85619 0.85987 0.87606 0.88342 0.88591 0.82173 0.86260 0.87689 0.91547 0.51479243 0.705976 0.6727491 0.4278371 0.668726 0.181018 0.809384 0.78329 0.729249 0.74356 0.85128 4 0.83915 0.82745 0.00027003 11 0.74141 0.74011 0.0013014 0.609942 4.5264e-01 insignificant 1 1.0000000 insignificant 0.909001 0.13288235 insignificant 1 1.00000 insignificant 0.0204451 0.522566 insignificant 1 insignificant 0.83915 0.451408 0.3617727 11 0.74141 0.472320 0.2690882 1.8138e-31 1.000000 hypermethylated 1.8138e-29 1 hypermethylated 5.2947e-12 1.000000 hypermethylated 7.5638e-10 1 hypermethylated 0.309837 2.9100e-04 hypermethylated 8.8180e-03 hypermethylated 0.83936 0.723224 0.1193441 10 0.79844 0.620030 0.1784093 3.1143e-12 0.9928131 weaklyHypermeth 2.8312e-10 1 weaklyHypermeth 2.3741e-04 0.9967023 weaklyHypermeth 1.1870e-02 1 weaklyHypermeth 0.139676 1.0361e-02 weaklyHypermeth 4.3466e-01 insignificant 0.82745 0.451408 0.3600711 12 0.74011 0.472320 0.2677867 1.8719e-22 1.00000 hypermethylated 1.8719e-20 1 hypermethylated 4.1637e-10 1.000000 hypermethylated 5.2046e-08 1 hypermethylated 0.289392 3.9435e-04 hypermethylated 1.1950e-02 hypermethylated 0.82791 0.723224 0.120616 10 0.79704 0.620030 0.1770077 1.9208e-08 0.9987060 weaklyHypermeth 1.4775e-06 1 weaklyHypermeth 6.7751e-04 0.999777 weaklyHypermeth 3.0796e-02 1 weaklyHypermeth 0.1192304 2.2235e-02 weaklyHypermeth 0.7549200 insignificant 0.450909 0.723224 -0.235897 10 0.431729 0.620030 -0.18830108 0.99509786 5.4171e-06 hypomethylated 1.000000 1.8680e-04 hypomethylated 0.9979527 4.9925e-04 hypomethylated 1 1.9970e-02 hypomethylated -0.170162 1.4210e-02 weaklyHypometh 0.3086695 insignificant chr5 179410851 179411851 64724 MIR340 ENSG00000198995 0.81781 263 8 0.76186 84 4 0.74815 35 3 0.83174 205 8 0.67978 79 4 0.74940 74 4 0.67009 95 4 0.86023 97 8 0.58731 50 4 0.81259 54 4 0.84509 80 8 0.47917 23 3 0.64465 103 8 0.85714 28 4 0.68981 69 4 0.51488 25 3 NA 0 0 0.73921 261 9 0.79066 53 4 0.84549 48 5 0.68519 25 3 0.85714 7 0 0.71433 161 8 0.70442 61 4 0.76219 89 5 0.69794 50 6 0.65972 41 1 0.90000 16 2 0.64795 123 4 0.71415 60 8 0.72798 39 5 0.69024 72 8 0.6754870 116 8 0.761290 117 7 0.7454545 112 8 0.375000 8 0 0.646465 68 4 0.7445549 71 8 0.733267 205 8 0.77002 183 5 0.755613 188 8 0.82412 232 5 0.74586 223 8 0.81621 0.77373 0.76895 0.83096 0.74661 0.78746 0.76807 0.92964 0.66885 0.73933 0.78059 0.61416 0.70907 0.86248 0.91324 0.69439 NA 0.80955 0.85726 0.90887 0.73744 0.96635 0.75290 0.81041 0.82417 0.80448 0.71309 0.92818 0.68811 0.72771 0.73646 0.82620 0.79181574 0.789748 0.7555832 0.7115308 0.711205 0.758058 0.798103 0.81270 0.813387 0.83650 0.82213 0 0.77043 0.73790 0.03240942 4 0.76363 0.70375 0.0598764 0.019439 9.1160e-01 lowCoverage 1 1.0000000 lowCoverage 0.378145 0.60130652 lowCoverage 1 1.00000 lowCoverage 0.0027929 0.935406 lowCoverage 1 lowCoverage 0.77043 0.717480 0.0510846 4 0.76363 0.725685 0.0379415 9.4515e-02 0.982576 lowCoverage 8.5148e-01 1 lowCoverage 2.3962e-01 0.982547 lowCoverage 1.0000e+00 1 lowCoverage 0.074855 2.8731e-01 lowCoverage 1.0000e+00 lowCoverage 0.77043 0.774976 0.0032202 4 0.76363 0.755291 0.0083356 5.1812e-01 0.4579850 lowCoverage 1.0000e+00 1 lowCoverage 7.3382e-01 0.6410432 lowCoverage 1.0000e+00 1 lowCoverage -0.032879 2.9435e-01 lowCoverage 1.0000e+00 lowCoverage 0.73790 0.717480 0.0221723 4 0.70375 0.725685 -0.0219349 4.4098e-01 0.78685 lowCoverage 1.0000e+00 1 lowCoverage 4.4789e-01 0.909135 lowCoverage 1.0000e+00 1 lowCoverage 0.072062 2.9683e-01 lowCoverage 1.0000e+00 lowCoverage 0.73790 0.774976 -0.028382 4 0.70375 0.755291 -0.0515407 8.6645e-01 0.0595748 lowCoverage 1.0000e+00 1 lowCoverage 8.8900e-01 0.272913 lowCoverage 1.0000e+00 1 lowCoverage -0.0356723 2.0718e-01 lowCoverage 1.0000000 lowCoverage 0.717480 0.774976 -0.045297 6 0.725685 0.755291 -0.02960589 0.95900444 7.9286e-02 insignificant 1.000000 8.9085e-01 insignificant 0.9887091 1.7681e-01 insignificant 1 1.0000e+00 insignificant -0.107734 1.3351e-01 insignificant 1.0000000 insignificant chr5 179445713 179446713 64726 ENSG00000213306 0.63222 294 8 0.61561 145 8 0.60686 142 8 0.69247 219 8 0.61667 69 8 0.71038 389 8 0.64471 135 8 0.63657 138 8 0.67386 133 8 0.62808 110 8 0.69683 308 8 0.42326 68 6 0.67694 153 7 0.78571 19 3 0.70650 123 8 0.62054 67 6 0.54465 74 6 0.62396 206 8 0.64332 238 8 0.67749 369 8 0.74823 70 8 0.67358 110 7 0.70296 174 8 0.58750 57 4 0.71071 63 8 0.65823 267 8 0.60887 82 7 0.59911 39 4 0.75933 125 8 0.68666 228 8 0.68564 284 8 0.69210 406 8 0.6225961 176 8 0.533406 110 8 0.6185409 177 8 0.635690 52 6 0.559224 85 8 0.5107754 275 8 0.603201 245 8 0.74172 274 8 0.674428 233 8 0.70385 237 8 0.73952 199 8 0.64534 0.61622 0.64227 0.69912 0.65614 0.71646 0.62765 0.69433 0.62541 0.72434 0.65861 0.66346 0.66131 0.67423 0.73768 0.65649 0.58021 0.62640 0.68025 0.70490 0.73573 0.67490 0.68362 0.64651 0.75629 0.66751 0.62841 0.62128 0.76055 0.69812 0.71349 0.63032 0.66042956 0.547595 0.6323936 0.6260128 0.743480 0.675610 0.693742 0.76201 0.669253 0.72527 0.72680 5 0.67696 0.68031 -0.00257082 8 0.64287 0.72701 -0.0841406 0.897690 4.1166e-01 insignificant 1 1.0000000 insignificant 0.994555 0.18665977 insignificant 1 1.00000 insignificant -0.0332439 0.153224 insignificant 1 insignificant 0.67696 0.653714 0.0265945 8 0.64287 0.502763 0.1401066 2.1197e-02 0.981060 weaklyHypermeth 2.1944e-01 1 insignificant 9.1304e-02 0.993542 insignificant 9.0400e-01 1 insignificant 0.062793 3.8700e-02 weaklyHypermeth 5.6087e-01 insignificant 0.67717 0.717172 -0.0469490 8 0.65874 0.630737 0.0280063 9.8689e-01 0.0191535 weaklyHypometh 1.0000e+00 1 insignificant 9.9086e-01 0.0130156 weaklyHypometh 1.0000e+00 1 insignificant -0.049711 1.4096e-01 insignificant 1.0000e+00 insignificant 0.68031 0.653714 0.0281534 8 0.72701 0.502763 0.2242472 1.0828e-01 0.98445 insignificant 1.0000e+00 1 insignificant 1.5304e-02 0.998966 weaklyHypermeth 2.0120e-01 1 insignificant 0.096037 4.4554e-03 weaklyHypermeth 9.6857e-02 weaklyHypermeth 0.67964 0.717172 -0.044668 8 0.69668 0.630737 0.0659403 9.9968e-01 0.0063151 weaklyHypometh 1.0000e+00 1 insignificant 9.7105e-01 0.132587 insignificant 1.0000e+00 1 insignificant -0.0164673 6.0033e-01 insignificant 1.0000000 insignificant 0.655212 0.717172 -0.069625 8 0.558625 0.630737 -0.07211214 0.99713883 3.0337e-04 weaklyHypometh 1.000000 6.3201e-03 weaklyHypometh 0.9998935 7.1520e-03 weaklyHypometh 1 1.5548e-01 insignificant -0.112504 9.2165e-03 weaklyHypometh 0.2284377 insignificant chr6 1692033 1693033 64789 ENSG00000203569 0.74961 202 4 0.80873 105 4 0.52850 83 4 0.74592 117 4 0.74007 69 4 0.73831 235 5 0.78476 91 4 0.80526 76 4 0.73943 61 4 0.70916 93 4 0.78808 145 5 0.62752 55 4 0.84857 64 4 NA 0 0 0.79425 100 4 0.73275 53 4 0.64646 41 4 0.72650 113 4 0.72920 163 4 0.75124 192 5 0.72805 50 4 0.79950 69 4 0.78458 129 4 0.80000 48 4 0.82857 33 4 0.74397 161 5 0.79690 51 4 0.60440 47 4 0.68855 83 4 0.71599 188 5 0.71893 141 5 0.74960 274 5 0.6844444 115 5 0.616071 66 4 0.6657566 168 5 0.566964 30 4 0.755628 62 4 0.6244843 174 5 0.730960 169 5 0.74910 202 4 0.767292 111 4 0.80159 181 4 0.83152 180 4 0.67748 0.74992 0.65322 0.73767 0.72509 0.69599 0.72397 0.75354 0.73976 0.63466 0.72735 0.62371 0.80927 NA 0.79389 0.72470 0.64458 0.71450 0.65916 0.69321 0.66308 0.74074 0.72672 0.74734 0.77584 0.67508 0.74438 0.59241 0.68498 0.68803 0.63550 0.69571 0.61170213 0.598658 0.7211986 0.5492971 0.675860 0.611631 0.691292 0.68089 0.828754 0.74497 0.78131 4 0.73178 0.73548 0.01148282 4 0.74927 0.74109 0.0081834 0.505403 7.3795e-01 lowCoverage 1 1.0000000 lowCoverage 0.615739 0.81322412 lowCoverage 1 1.00000 lowCoverage -0.0100427 0.684474 lowCoverage 1 lowCoverage 0.73178 0.666667 0.0561833 4 0.74927 0.655975 0.0932946 2.0536e-03 0.608201 lowCoverage 2.5044e-02 1 lowCoverage 3.1829e-03 0.778385 lowCoverage 5.2179e-02 1 lowCoverage 0.084319 2.4374e-02 lowCoverage 3.8689e-01 lowCoverage 0.73178 0.813760 -0.0320513 4 0.74927 0.768117 -0.0188480 9.1430e-01 0.1349752 lowCoverage 1.0000e+00 1 lowCoverage 8.9430e-01 0.1717343 lowCoverage 1.0000e+00 1 lowCoverage -0.039548 1.3500e-01 lowCoverage 1.0000e+00 lowCoverage 0.73548 0.666667 0.0528496 5 0.74109 0.655975 0.0851112 5.2135e-03 0.73550 weaklyHypermeth 6.2814e-02 1 weaklyHypermeth 1.0847e-02 0.886830 weaklyHypermeth 1.4858e-01 1 insignificant 0.094362 1.5265e-02 lowCoverage 2.5441e-01 lowCoverage 0.73548 0.813760 -0.043979 4 0.74109 0.768117 -0.0270314 9.1745e-01 0.0980771 lowCoverage 1.0000e+00 1 lowCoverage 9.1869e-01 0.252772 lowCoverage 1.0000e+00 1 lowCoverage -0.0295049 2.6925e-01 lowCoverage 1.0000000 lowCoverage 0.666667 0.813760 -0.087018 4 0.655975 0.768117 -0.11214263 0.96992473 7.1925e-03 lowCoverage 1.000000 1.1693e-01 lowCoverage 0.9464591 8.1056e-03 lowCoverage 1 1.7246e-01 lowCoverage -0.123867 4.4281e-03 lowCoverage 0.1341836 lowCoverage chr6 2029170 2030170 64847 GMDS ENSG00000112699 0.71338 205 7 0.64749 120 7 0.75044 94 7 0.94707 119 7 0.70025 54 7 0.67768 229 7 0.63139 98 7 0.87190 68 4 0.82749 67 6 0.61390 60 5 0.81825 211 7 0.72992 72 6 0.73478 98 7 0.90000 14 2 0.70109 102 7 0.80148 70 6 0.77778 58 6 0.78025 132 7 0.84859 103 7 0.74917 213 7 0.73095 27 3 0.91440 91 6 0.73942 156 7 0.92778 47 3 0.89833 56 5 0.86859 140 7 0.47222 26 2 0.73006 41 3 0.71701 63 4 0.79042 128 7 0.82211 136 7 0.81674 311 7 0.6705693 106 4 0.705928 85 7 0.7614253 100 7 0.756854 56 5 0.585764 71 4 0.7888986 125 7 0.833642 248 7 0.62850 252 7 0.758073 189 7 0.92138 201 7 0.82901 258 7 0.83443 0.77492 0.80146 0.93811 0.77604 0.79280 0.75153 0.87469 0.80351 0.76109 0.84658 0.76602 0.80282 0.82729 0.75087 0.85168 0.75393 0.75546 0.86569 0.84018 0.71396 0.89064 0.87514 0.87338 0.87394 0.84600 0.70676 0.79349 0.76050 0.81301 0.80333 0.81773 0.70248511 0.701529 0.7767538 0.7403253 0.733620 0.832396 0.868141 0.84248 0.882426 0.95190 0.86037 3 0.81893 0.83715 -0.02555822 7 0.66726 0.81418 -0.1469136 0.999562 4.1615e-02 weaklyHypometh 1 1.0000000 insignificant 0.999938 0.01902705 weaklyHypometh 1 1.00000 insignificant -0.0245538 0.557881 insignificant 1 insignificant 0.82309 0.766114 0.0536682 7 0.79617 0.746613 0.0495598 6.0513e-03 0.985426 weaklyHypermeth 6.9556e-02 1 weaklyHypermeth 7.3183e-02 0.945675 insignificant 7.4676e-01 1 insignificant 0.049541 2.0632e-01 insignificant 1.0000e+00 insignificant 0.81893 0.872822 -0.0541828 7 0.66726 0.669868 -0.0026058 9.9998e-01 0.0095442 weaklyHypometh 1.0000e+00 1 insignificant 9.8354e-01 0.0136962 weaklyHypometh 1.0000e+00 1 insignificant -0.033006 5.5730e-01 insignificant 1.0000e+00 insignificant 0.83773 0.766114 0.0752584 7 0.82704 0.746613 0.0804240 6.9762e-05 0.99681 weaklyHypermeth 1.0110e-03 1 weaklyHypermeth 6.4095e-03 0.992617 weaklyHypermeth 9.6232e-02 1 weaklyHypermeth 0.074095 1.3659e-01 insignificant 1.0000e+00 insignificant 0.83715 0.872822 -0.029596 7 0.81418 0.669868 0.1443078 9.1962e-01 0.3343146 insignificant 1.0000e+00 1 insignificant 4.9967e-01 0.604859 insignificant 1.0000e+00 1 insignificant -0.0084526 8.9228e-01 insignificant 1.0000000 insignificant 0.766114 0.876316 -0.106749 7 0.746613 0.852649 -0.10603558 0.99970862 7.3406e-04 weaklyHypometh 1.000000 1.4393e-02 weaklyHypometh 0.9991766 3.6772e-03 weaklyHypometh 1 9.1930e-02 weaklyHypometh -0.082548 1.9568e-01 insignificant 1.0000000 insignificant chr6 5088680 5089680 64928 ENSG00000182404 0.76889 170 6 0.89527 92 6 0.88313 75 5 0.92638 119 6 0.88718 77 6 0.83669 273 6 0.83104 83 5 0.89583 145 6 0.91280 112 6 0.85995 94 6 0.88600 255 6 0.70667 32 3 0.84922 64 5 0.92143 70 5 0.76680 94 5 0.72667 26 5 0.00000 5 0 0.90078 91 5 0.89675 243 5 0.79826 235 6 0.84890 45 4 0.93792 67 5 0.87560 118 5 0.79487 93 6 0.95294 60 5 0.76358 217 6 0.87575 98 6 0.64618 48 5 0.83583 179 5 0.91473 175 6 0.80533 166 6 0.93082 295 6 0.9383333 108 6 0.878284 108 5 0.8714976 133 6 1.000000 12 0 0.882160 98 6 0.8194329 204 6 0.886218 142 6 0.80202 138 6 0.875460 134 5 0.88286 44 5 0.88023 109 6 0.92185 0.91051 0.86309 0.91987 0.91001 0.84596 0.91252 0.88281 0.90189 0.87754 0.90557 0.72554 0.92184 0.91208 0.91202 0.75753 0.21189 0.89638 0.87202 0.86553 0.80461 0.92102 0.88155 0.79859 0.93707 0.87976 0.84416 0.67310 0.87859 0.89998 0.94072 0.93307 0.94629032 0.891678 0.8978962 1.0000000 0.864621 0.868837 0.917277 0.95953 0.886130 0.89355 0.89633 4 0.87941 0.88789 -0.00529998 6 0.83295 0.80316 0.0297899 0.849293 4.6020e-01 insignificant 1 1.0000000 insignificant 0.825284 0.43744601 insignificant 1 1.00000 insignificant -0.0410503 0.432568 insignificant 1 insignificant 0.88037 0.877828 0.0024459 5 0.87726 0.869697 0.0075653 3.6349e-01 0.194328 insignificant 1.0000e+00 1 insignificant 9.7526e-01 0.018963 inconclusive 1.0000e+00 1 insignificant -0.090798 9.1654e-02 lowCoverage 1.0000e+00 lowCoverage 0.88043 0.892416 -0.0168268 6 0.89480 0.763302 0.1314941 8.6762e-01 0.3029979 insignificant 1.0000e+00 1 insignificant 9.2810e-01 0.2827305 insignificant 1.0000e+00 1 insignificant -0.057871 2.3724e-01 insignificant 1.0000e+00 insignificant 0.88932 0.877828 0.0061474 5 0.89032 0.869697 0.0206232 2.3934e-01 0.46871 insignificant 1.0000e+00 1 insignificant 8.7135e-01 0.094886 insignificant 1.0000e+00 1 insignificant -0.049748 1.8860e-01 lowCoverage 1.0000e+00 lowCoverage 0.88896 0.892416 -0.012608 6 0.87027 0.763302 0.1069723 4.0620e-01 0.3607228 insignificant 1.0000e+00 1 insignificant 5.0832e-01 0.389869 insignificant 1.0000e+00 1 insignificant -0.0168210 5.8218e-01 insignificant 1.0000000 insignificant 0.877828 0.893993 -0.020794 5 0.869697 0.890519 -0.02082214 0.48388832 3.5279e-01 insignificant 1.000000 1.0000e+00 insignificant 0.2931956 8.4744e-01 insignificant 1 1.0000e+00 insignificant 0.032927 3.0522e-01 lowCoverage 1.0000000 lowCoverage chr6 7096083 7097083 65010 RREB1 ENSG00000124782 0.58852 159 5 0.38333 72 5 0.58239 97 5 0.60268 119 5 0.56818 68 5 0.66945 184 5 0.63926 70 5 0.66079 91 5 0.47755 119 5 0.71111 119 5 0.70984 97 5 0.55769 52 2 0.23913 175 5 0.65882 80 2 0.45056 111 5 0.78569 63 2 0.39758 38 5 0.537681 166 5 0.41162 34 2 0.47113 115 5 0.83333 30 2 0.39240 119 5 0.598684 96 5 0.76128 77 5 0.57733 60 2 0.49983 115 5 0.50079 83 5 0.40419 51 4 0.31448 56 2 0.21895 143 5 0.520000 115 5 0.62623 149 5 0.812143 86 5 0.729167 45 2 1.00000 50 2 0.62828 26 2 0.882098 54 5 0.739544 101 5 0.844038 93 2 0.65625 109 2 0.36601 166 2 0.40234 133 2 0.623114 109 5 0.54825 0.48478 0.55247 0.63762 0.51668 0.73467 0.63932 0.74717 0.53114 0.66011 0.69500 0.55727 0.31942 0.64404 0.51985 0.63885 0.39324 0.64634 0.487374 0.49820 0.574786 0.379206 0.713071 0.655482 0.59380 0.52745 0.624664 0.47146 0.47841 0.24874 0.57778 0.67935 0.812912 0.732360 1.00000 0.5746568 0.810584 0.710233 0.659257 0.57919 0.385123 0.598286 0.751487 2 0.57910 0.52651 0.0482115 5 0.53285 0.48116 0.0516910 0.141167 0.98715 insignificant 1 1 insignificant 0.64490 0.84426 insignificant 1 1 insignificant 0.03452497 0.566021 lowCoverage 1 lowCoverage 0.57947 0.792818 -0.215974 5 0.57276 0.813145 -0.240389 9.9976e-01 2.1692e-09 hypomethylated 1.0000e+00 2.1692e-06 hypomethylated 9.9986e-01 1.1605e-06 hypomethylated 1.0000e+00 0.0011605 hypomethylated -0.2433889 3.6101e-03 lowCoverage 2.1236e-01 lowCoverage 0.57910 0.572131 0.010025 2 0.53285 0.610370 -0.0775181 8.3517e-02 0.25727345 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.2916e-01 0.2289650 lowCoverage 1.0000e+00 1 lowCoverage -0.023201 8.1295e-01 lowCoverage 1.0000000 lowCoverage 0.52704 0.792818 -0.2673999 5 0.51073 0.813145 -0.3024186 9.9998e-01 4.7087e-08 hypomethylated 1.0000e+00 4.7087e-05 hypomethylated 9.9996e-01 2.0996e-05 hypomethylated 1.0000e+00 0.020996 hypomethylated -0.2779139 2.2334e-03 lowCoverage 0.14889224 lowCoverage 0.52651 0.572131 -0.029582 2 0.48116 0.610370 -0.129209 4.3189e-01 0.140548 lowCoverage 1.0000e+00 1 lowCoverage 8.7261e-01 0.192695 lowCoverage 1.0000e+00 1 lowCoverage -0.0577262 5.8797e-01 lowCoverage 1.0000000 lowCoverage 0.792818 0.571429 0.222418 2 0.813145 0.53244 0.2807010 0.00011895 1.0000e+00 lowCoverage 0.02379 1.0000e+00 lowCoverage 0.0093483 9.9996e-01 lowCoverage 1 1.0000000 lowCoverage 0.220188 0.07095133 lowCoverage 1.000000 lowCoverage chr6 7968050 7969050 65042 ENSG00000219294 0.87072 155 6 0.90833 39 5 0.79167 12 0 0.87803 164 6 0.80000 5 0 0.80024 148 6 0.75000 13 0 0.55556 30 2 0.83333 11 0 0.50000 14 2 0.89405 51 6 0.50000 4 0 0.80000 24 2 NA 0 0 0.52778 21 2 1.00000 4 0 0.94444 10 0 0.814947 145 6 0.86259 58 6 0.66824 92 6 0.83333 7 0 0.81319 53 6 0.765177 95 6 0.71429 17 2 0.83889 44 6 0.77757 99 6 0.75590 31 2 0.62500 5 0 0.70000 28 2 0.81923 76 6 0.803134 94 6 0.79032 140 6 0.787037 32 2 0.692460 49 6 0.80093 79 4 0.93333 14 2 0.600000 10 2 0.844156 80 6 0.865470 146 6 0.84498 178 6 0.83054 188 6 0.91888 97 6 0.901612 144 6 0.89267 0.89167 0.79167 0.82717 0.83333 0.85794 0.75000 0.70370 0.83333 0.66667 0.91786 0.61929 0.80000 NA 0.61111 0.93921 0.94444 0.85886 0.830682 0.79187 0.833333 0.815278 0.765803 0.833333 0.86111 0.78799 0.770940 0.70337 0.70833 0.83205 0.84795 0.82177 0.898148 0.720238 0.84722 0.9333333 0.699603 0.822917 0.894144 0.88536 0.841703 0.918135 0.901347 0 0.83784 0.80116 0.0337311 6 0.80159 0.71748 0.0841100 0.061376 0.89363 insignificant 1 1 insignificant 0.13890 0.63098 insignificant 1 1 insignificant 0.00401173 0.919768 lowCoverage 1 lowCoverage 0.83835 0.784091 0.041980 6 0.84468 0.811479 0.033198 1.2041e-01 9.8388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6151e-01 9.8112e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0026376 9.6521e-01 lowCoverage 1.0000e+00 lowCoverage 0.83852 0.877822 -0.038478 6 0.84468 0.882928 -0.0382500 9.7413e-01 0.29143417 insignificant 1.0000e+00 1.00000 insignificant 4.2913e-01 0.6631214 insignificant 1.0000e+00 1 insignificant -0.098617 1.8464e-02 lowCoverage 1.0000000 lowCoverage 0.80175 0.783270 0.0120295 6 0.78998 0.780059 0.0099181 1.1414e-01 5.8527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5610e-01 6.3443e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0066493 9.0023e-01 lowCoverage 1.00000000 lowCoverage 0.80058 0.877822 -0.073359 6 0.67712 0.882928 -0.205804 9.9994e-01 0.019717 weaklyHypometh 1.0000e+00 1 insignificant 9.5760e-01 0.251290 insignificant 1.0000e+00 1 insignificant -0.1026283 1.1939e-03 lowCoverage 0.2387723 lowCoverage 0.783270 0.877660 -0.084660 6 0.780059 0.86342 -0.0833565 0.99633198 7.9722e-03 weaklyHypometh 1.00000 3.1889e-01 insignificant 0.9036149 1.3770e-01 insignificant 1 1.0000000 insignificant -0.095979 0.10451654 lowCoverage 1.000000 lowCoverage chr6 9085006 9086006 65172 SLC35B3 ENSG00000124786 0.91231 262 7 0.78738 172 7 0.65578 102 7 0.90974 324 7 0.92857 22 2 0.93203 472 7 0.92473 89 7 0.91674 84 7 0.91336 128 7 0.82494 78 7 0.92910 217 7 0.92857 69 5 0.89339 100 7 0.89286 46 3 0.90812 132 7 0.90476 55 7 NA 0 0 0.780897 269 7 0.91829 57 4 0.93463 210 7 0.90659 33 3 0.86176 111 7 0.913982 121 7 0.87375 115 7 0.90921 91 7 0.95538 117 7 0.85052 63 5 0.72314 54 7 0.86049 87 7 0.95754 185 7 0.896599 181 7 0.90367 262 7 0.161906 268 7 0.090136 102 7 0.42857 166 7 0.38095 53 6 0.234434 258 7 0.500461 230 7 0.867101 337 7 0.86394 250 7 0.83718 332 7 0.78971 326 7 0.656177 274 7 0.90951 0.75390 0.63960 0.90096 0.89837 0.93105 0.93361 0.92111 0.90338 0.81243 0.92199 0.92145 0.88371 0.90155 0.88694 0.90904 NA 0.76649 0.890855 0.92595 0.893739 0.848823 0.914083 0.846790 0.90748 0.94098 0.842732 0.83076 0.84067 0.94743 0.87665 0.90203 0.146539 0.086489 0.36279 0.3224806 0.212381 0.520398 0.851283 0.85176 0.804218 0.773116 0.643037 6 0.87950 0.89085 -0.0129777 7 0.89695 0.86689 0.0300664 0.917975 0.28168 insignificant 1 1 insignificant 0.92977 0.30464 insignificant 1 1 insignificant -0.00037438 0.987786 insignificant 1 insignificant 0.87946 0.232126 0.633657 7 0.88223 0.302552 0.579682 3.9807e-47 1.0000e+00 hypermethylated 3.9807e-44 1.0000e+00 hypermethylated 9.0236e-13 1.0000e+00 hypermethylated 4.5118e-10 1.0000000 hypermethylated 0.5846015 1.8960e-04 hypermethylated 1.7236e-02 hypermethylated 0.87946 0.805135 0.076494 7 0.88223 0.809044 0.0731898 1.4404e-04 0.99915184 weaklyHypermeth 1.6004e-02 1.00000 weaklyHypermeth 2.2420e-04 0.9999908 weaklyHypermeth 2.8025e-02 1 weaklyHypermeth 0.081190 1.0924e-01 insignificant 1.0000000 insignificant 0.89132 0.232126 0.6212672 7 0.89549 0.302552 0.5929390 9.1742e-37 1.0000e+00 hypermethylated 9.1742e-34 1.0000e+00 hypermethylated 1.2930e-11 1.0000e+00 hypermethylated 1.2930e-08 1.000000 hypermethylated 0.5849759 1.7829e-04 hypermethylated 0.01620809 hypermethylated 0.89132 0.805135 0.098028 7 0.89549 0.809044 0.086447 1.0661e-05 0.999992 weaklyHypermeth 1.3326e-03 1 weaklyHypermeth 2.2876e-05 0.999999 weaklyHypermeth 4.5752e-03 1 weaklyHypermeth 0.0815640 1.0911e-01 insignificant 1.0000000 insignificant 0.232126 0.805135 -0.571118 7 0.302552 0.80904 -0.5064918 0.99999993 1.4416e-19 hypomethylated 1.00000 1.4416e-16 hypomethylated 0.9999994 4.1166e-06 hypomethylated 1 0.0034739 hypomethylated -0.503412 0.00018523 hypomethylated 0.061745 hypomethylated chr6 10220859 10221859 65329 OFCC1 ENSG00000181355 0.19318 402 16 0.34814 181 11 0.38955 158 11 0.11472 233 14 0.23354 143 10 0.26017 285 18 0.19566 266 13 0.28149 168 11 0.21741 144 11 0.20198 192 11 0.16227 295 11 0.29162 212 11 0.26689 196 11 0.00000 3 0 0.16069 301 11 0.16789 243 10 0.08065 246 11 0.078765 370 15 0.12815 168 11 0.31128 313 17 0.20064 77 7 0.11667 97 10 0.098084 272 15 0.17977 146 10 0.40278 37 1 0.80996 200 10 0.20097 146 12 0.31172 63 7 0.24775 137 8 0.44779 248 15 0.086599 292 16 0.12467 416 18 0.054057 192 13 0.318083 216 11 0.25000 101 2 0.27825 101 9 0.092308 56 6 0.388488 252 13 0.124451 666 15 0.17980 481 16 0.14426 433 14 0.11802 411 14 0.023214 379 14 0.09782 0.34020 0.45632 0.18208 0.16160 0.24454 0.18059 0.32354 0.19421 0.15822 0.16922 0.18118 0.28863 NA 0.16158 0.19379 0.07436 0.14584 0.091565 0.29330 0.045175 0.028659 0.063274 0.035300 0.38012 0.79583 0.085024 0.38298 0.06993 0.67006 0.12065 0.14386 0.021940 0.375179 NA 0.2285260 0.051053 0.346113 0.132316 0.15126 0.093277 0.061898 0.033667 3 0.19208 0.25129 -0.0606702 11 0.25439 0.25333 0.0010638 0.997367 0.16232 insignificant 1 1 insignificant 0.32650 0.95046 insignificant 1 1 insignificant -0.06474741 0.324686 insignificant 1 insignificant 0.19176 0.214597 -0.015455 10 0.18568 0.235874 -0.050198 3.7850e-01 4.4075e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.4149e-01 8.1047e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0259949 6.6621e-01 insignificant 1.0000e+00 insignificant 0.19176 0.096284 0.073632 12 0.18568 0.132213 0.0534632 2.0282e-04 0.99943899 weaklyHypermeth 1.8438e-02 1.00000 weaklyHypermeth 4.0953e-05 0.9998183 weaklyHypermeth 6.8254e-03 1 weaklyHypermeth 0.086255 2.8256e-02 weaklyHypermeth 1.0000000 insignificant 0.25059 0.214597 0.0477890 10 0.23999 0.235874 0.0041161 3.5766e-01 7.0897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9444e-01 9.1348e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0387525 6.3521e-01 insignificant 1.00000000 insignificant 0.25059 0.096284 0.132816 9 0.23999 0.132213 0.107778 1.9696e-02 0.999859 weaklyHypermeth 9.8482e-01 1 insignificant 2.7070e-01 0.989996 insignificant 1.0000e+00 1 insignificant 0.1510020 3.5567e-02 weaklyHypermeth 1.0000000 insignificant 0.214597 0.096284 0.124047 8 0.235874 0.13221 0.1036615 0.00067398 9.6327e-01 weaklyHypermeth 0.11233 1.0000e+00 insignificant 0.1868905 9.9568e-01 insignificant 1 1.0000000 insignificant 0.112249 0.09978747 insignificant 1.000000 insignificant chr6 14947825 14948825 65545 ENSG00000206960 0.78901 55 5 0.75102 134 5 0.57143 24 0 0.80683 97 5 0.75000 25 1 0.83097 162 5 0.79630 36 5 0.79798 98 5 0.75926 47 6 0.75991 70 5 0.88752 143 5 0.70000 28 1 0.67460 95 7 0.74568 46 7 0.79054 76 7 0.85500 29 1 1.00000 8 0 0.723551 106 5 0.78906 93 5 0.79852 125 5 0.81481 22 1 0.82286 26 4 0.675758 85 8 0.90625 32 1 0.86250 29 4 0.80406 232 8 0.73214 35 1 0.52424 35 2 0.72942 101 8 0.87610 229 5 0.722196 182 5 0.67640 164 5 0.672619 42 5 0.689710 59 5 0.76562 106 8 0.80000 21 4 0.764172 51 5 0.800172 131 5 0.686580 81 8 0.74327 96 5 0.75446 93 4 0.68750 30 1 0.753676 85 5 0.72188 0.72314 0.60390 0.71894 0.73377 0.78265 0.78355 0.70361 0.71558 0.79371 0.78678 0.60390 0.76503 0.71947 0.76349 0.75065 NA 0.75816 0.693994 0.81025 0.792208 0.805195 0.777450 0.853896 0.81688 0.70370 0.623377 0.65909 0.73419 0.80122 0.76470 0.76719 0.658627 0.631149 0.76461 0.8259740 0.700680 0.701904 0.659976 0.75058 0.767996 0.720779 0.717628 0 0.73846 0.74573 -0.0037789 5 0.76281 0.73393 0.0288768 0.673077 0.87108 insignificant 1 1 insignificant 0.73005 0.75482 insignificant 1 1 insignificant 0.01663005 0.652937 lowCoverage 1 lowCoverage 0.73842 0.692683 0.048107 5 0.76921 0.722245 0.046968 3.6252e-02 9.9494e-01 weaklyHypermeth 8.4518e-01 1.0000e+00 insignificant 4.9718e-01 9.6183e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0301432 3.2424e-01 lowCoverage 1.0000e+00 lowCoverage 0.73954 0.709091 0.028655 5 0.75704 0.776224 -0.0191863 1.0732e-01 0.88753434 insignificant 1.0000e+00 1.00000 insignificant 7.0101e-02 0.9592650 insignificant 1.0000e+00 1 insignificant 0.053760 4.3811e-02 lowCoverage 1.0000000 lowCoverage 0.74827 0.692683 0.0541695 5 0.77798 0.722245 0.0557366 4.9729e-02 9.9719e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.9964e-01 9.7069e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0135131 7.2866e-01 lowCoverage 1.00000000 lowCoverage 0.74742 0.709091 0.036419 5 0.74739 0.776224 -0.028838 5.4451e-02 0.856027 insignificant 1.0000e+00 1 insignificant 5.3452e-02 0.901390 insignificant 1.0000e+00 1 insignificant 0.0371303 3.0254e-01 lowCoverage 1.0000000 lowCoverage 0.692683 0.707572 -0.019060 5 0.722245 0.72028 0.0019653 0.71441494 4.2957e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5150322 7.7625e-01 insignificant 1 1.0000000 insignificant 0.023617 0.41141569 lowCoverage 1.000000 lowCoverage chr6 15125453 15126453 65551 ENSG00000206960 0.52805 572 13 0.47850 448 13 0.42692 323 11 0.56877 512 12 0.51411 151 13 0.52303 600 13 0.50356 249 13 0.50672 308 13 0.47312 321 12 0.50509 288 13 0.54672 496 13 0.57766 172 11 0.44108 385 13 0.94095 56 3 0.43378 376 13 0.64273 140 8 0.26415 251 9 0.533439 596 12 0.37354 310 13 0.49943 621 13 0.50311 126 10 0.53242 301 13 0.566217 380 13 0.57489 148 10 0.54748 148 9 0.49737 549 13 0.48764 216 12 0.51168 119 12 0.46555 329 12 0.48306 571 13 0.466270 497 13 0.51334 757 13 0.368888 350 14 0.414717 208 13 0.38373 167 9 0.30497 123 11 0.378379 252 13 0.351203 540 13 0.440295 522 13 0.51964 523 13 0.42256 535 13 0.53454 504 13 0.459714 541 13 0.62057 0.54814 0.48399 0.58503 0.52825 0.56774 0.53687 0.56457 0.53179 0.54365 0.60189 0.56147 0.50126 0.56937 0.45629 0.60897 0.43179 0.55768 0.414861 0.51770 0.600063 0.507633 0.583729 0.594095 0.53935 0.53266 0.554060 0.65775 0.51665 0.53199 0.44525 0.52768 0.426266 0.436142 0.31985 0.4256169 0.432019 0.409265 0.470533 0.53566 0.455461 0.543175 0.489096 9 0.52460 0.50230 0.0165272 13 0.48035 0.46784 0.0125072 0.312512 0.80699 insignificant 1 1 insignificant 0.86999 0.38595 insignificant 1 1 insignificant 0.00165027 0.957356 insignificant 1 insignificant 0.52468 0.399634 0.136148 13 0.49085 0.351610 0.139242 4.5430e-13 9.9999e-01 weaklyHypermeth 4.5430e-11 1.0000e+00 weaklyHypermeth 6.0366e-08 9.9958e-01 weaklyHypermeth 1.2073e-05 1.0000000 weaklyHypermeth 0.1470872 1.3312e-04 weaklyHypermeth 1.3312e-02 weaklyHypermeth 0.52468 0.465524 0.060462 13 0.49085 0.437207 0.0536456 6.6232e-04 0.28652448 weaklyHypermeth 5.4974e-02 1.00000 weaklyHypermeth 7.2741e-03 0.2401598 weaklyHypermeth 5.1958e-01 1 insignificant 0.038718 2.9858e-01 insignificant 1.0000000 insignificant 0.50242 0.400000 0.1227652 13 0.47673 0.394836 0.0818962 5.1903e-09 9.9946e-01 weaklyHypermeth 3.7073e-07 1.0000e+00 weaklyHypermeth 5.3916e-07 9.9972e-01 weaklyHypermeth 1.7972e-04 1.000000 weaklyHypermeth 0.1454369 1.2873e-05 weaklyHypermeth 0.00214554 weaklyHypermeth 0.50266 0.465524 0.047335 13 0.48698 0.437207 0.049769 4.7701e-03 0.276228 weaklyHypermeth 3.1801e-01 1 insignificant 4.6607e-02 0.440520 weaklyHypermeth 1.0000e+00 1 insignificant 0.0370672 1.8063e-01 insignificant 1.0000000 insignificant 0.399634 0.465524 -0.079902 13 0.351610 0.43721 -0.0855962 0.99918221 1.7102e-07 weaklyHypometh 1.00000 3.4204e-05 weaklyHypometh 0.9999901 2.5980e-04 weaklyHypometh 1 0.0519595 weaklyHypometh -0.108370 0.00437832 weaklyHypometh 0.486480 insignificant chr6 15269421 15270421 65561 ENSG00000210050 0.80974 71 6 0.71843 69 6 0.62143 32 4 0.50209 57 2 0.47222 35 2 0.66972 63 6 0.19608 38 2 0.68602 80 6 0.62222 22 2 0.87500 24 0 0.85833 156 6 0.63889 15 0 0.73266 79 6 0.67249 48 6 0.74537 52 6 0.58333 12 0 0.50000 24 2 0.589275 59 2 0.81944 30 2 0.72222 45 6 0.51905 19 1 0.81250 16 0 0.662500 39 2 0.88312 42 5 0.67794 47 4 0.81894 93 6 0.82559 79 4 0.78571 16 2 0.84209 42 2 0.81103 63 6 0.695098 74 6 0.86061 42 6 0.685317 64 5 0.650000 39 6 0.78915 49 6 0.75000 4 0 0.679570 106 6 0.735931 78 6 0.764957 65 2 0.72929 44 6 0.91481 49 2 0.69444 29 2 0.591711 80 6 0.83907 0.70895 0.71247 0.59979 0.55892 0.74760 0.33613 0.70623 0.69101 0.85714 0.83979 0.60847 0.75559 0.70421 0.76014 0.50000 0.66396 0.64576 0.838624 0.75608 0.560847 0.806975 0.725397 0.832612 0.63841 0.77301 0.882557 0.77119 0.81801 0.80872 0.74407 0.85137 0.702721 0.671958 0.84845 0.7267114 0.734716 0.739951 0.797517 0.74521 0.888536 0.772487 0.641807 0 0.70227 0.74606 -0.0275143 6 0.78563 0.80673 -0.0210991 0.957359 0.49970 insignificant 1 1 insignificant 0.99826 0.21144 insignificant 1 1 insignificant -0.11443279 0.020158 lowCoverage 1 lowCoverage 0.70198 0.711765 0.012436 6 0.75501 0.698353 0.056654 6.6681e-01 9.0451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9482e-01 7.5353e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0632474 1.3646e-01 lowCoverage 1.0000e+00 lowCoverage 0.70168 0.704120 -0.010938 2 0.71417 0.726972 -0.0127969 6.8469e-01 0.22883534 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.3639e-01 0.1179096 lowCoverage 1.0000e+00 1 lowCoverage -0.087296 2.0475e-01 lowCoverage 1.0000000 lowCoverage 0.74517 0.711765 0.0399012 6 0.77912 0.698353 0.0807672 3.7918e-01 9.7216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5262e-01 9.9164e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0511854 1.8861e-01 lowCoverage 1.00000000 lowCoverage 0.74382 0.704120 0.016895 2 0.74231 0.726972 0.015335 3.2837e-01 0.471514 lowCoverage 1.0000e+00 1 lowCoverage 6.2560e-01 0.461821 lowCoverage 1.0000e+00 1 lowCoverage 0.0271367 6.6946e-01 lowCoverage 1.0000000 lowCoverage 0.712166 0.704120 -0.024628 2 0.703634 0.72697 -0.0233376 0.75653475 9.8852e-02 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.8929601 1.4259e-01 lowCoverage 1 1.0000000 lowCoverage -0.024049 0.68831426 lowCoverage 1.000000 lowCoverage chr6 17320344 17321344 65698 ENSG00000215019 0.75231 176 6 0.70990 166 6 0.50623 150 6 0.49858 137 6 0.66288 45 4 0.59844 259 6 0.75331 73 6 0.70881 179 6 0.68177 130 6 0.73533 120 6 0.87476 147 6 0.69639 81 5 0.42430 207 6 0.51852 72 3 0.62842 149 6 0.62222 64 5 0.33058 68 6 0.559055 161 5 0.37059 123 6 0.56304 246 6 0.67937 59 7 0.11275 96 6 0.696196 184 6 0.59390 89 6 0.63314 60 5 0.65850 154 6 0.68800 112 6 0.41400 45 3 0.58332 150 5 0.70642 263 6 0.394949 171 6 0.83134 274 6 0.048657 288 6 0.022304 100 4 0.25000 101 3 0.00000 8 0 0.019913 133 6 0.081406 225 6 0.025242 221 6 0.12402 180 6 0.09692 126 6 0.27898 109 6 0.086004 159 6 0.74824 0.68239 0.52440 0.57972 0.70716 0.52050 0.75575 0.70164 0.64060 0.67524 0.85817 0.70969 0.40826 0.55248 0.62338 0.73000 0.31279 0.47143 0.421568 0.56410 0.733699 0.121702 0.703517 0.573845 0.58896 0.68075 0.628885 0.52649 0.68174 0.65818 0.39641 0.80073 0.031523 0.023759 0.29834 0.0093054 0.019828 0.067673 0.033932 0.10559 0.086043 0.294129 0.056648 5 0.59571 0.60591 -0.0119665 6 0.56258 0.56107 0.0015064 0.842460 0.58596 insignificant 1 1 insignificant 0.72608 0.84994 insignificant 1 1 insignificant 0.02711476 0.674202 insignificant 1 insignificant 0.59622 0.035088 0.562388 6 0.61468 0.037034 0.577644 1.1592e-34 1.0000e+00 hypermethylated 5.7961e-32 1.0000e+00 hypermethylated 1.2305e-13 1.0000e+00 hypermethylated 1.2305e-10 1.0000000 hypermethylated 0.5393912 7.7205e-08 lowCoverage 1.5441e-05 lowCoverage 0.59571 0.091824 0.494802 6 0.56258 0.090577 0.4720038 5.9859e-27 0.99999969 hypermethylated 5.9859e-24 1.00000 hypermethylated 1.2355e-12 1.0000000 hypermethylated 1.2355e-09 1 hypermethylated 0.487538 7.0452e-06 hypermethylated 0.0018723 hypermethylated 0.60825 0.035088 0.5741496 6 0.63375 0.037034 0.5967197 3.1464e-24 1.0000e+00 hypermethylated 1.5732e-21 1.0000e+00 hypermethylated 4.6113e-11 1.0000e+00 hypermethylated 2.3056e-08 1.000000 hypermethylated 0.5122765 9.7877e-07 lowCoverage 0.00032626 lowCoverage 0.60591 0.091824 0.506176 6 0.56107 0.090577 0.470497 1.2160e-18 0.999999 hypermethylated 1.2160e-15 1 hypermethylated 3.1565e-11 1.000000 hypermethylated 3.1565e-08 1 hypermethylated 0.4604233 1.0840e-05 hypermethylated 0.0036134 hypermethylated 0.035088 0.091940 -0.065827 6 0.037034 0.10567 -0.0686394 0.99940939 1.8004e-02 weaklyHypometh 1.00000 6.4299e-01 insignificant 0.9999134 2.6161e-03 weaklyHypometh 1 0.2906770 insignificant -0.051853 0.38579393 lowCoverage 1.000000 lowCoverage chr6 18632357 18633357 65743 ENSG00000210203 0.85791 138 7 0.89899 189 8 0.80686 135 8 0.86219 86 8 0.71714 56 3 0.90502 246 5 0.79751 87 5 0.85248 60 5 0.83571 54 5 0.93518 61 5 0.85432 183 5 0.85385 42 4 0.78109 99 5 0.92308 13 1 0.94502 86 5 0.82000 21 3 0.84250 48 5 0.933123 102 7 0.93068 94 5 0.89869 191 8 0.90265 41 3 0.77747 54 4 0.842837 164 7 0.86307 69 5 0.87500 19 1 0.88580 181 8 0.82730 65 5 0.93333 47 5 0.84164 101 5 0.94055 201 8 0.838059 187 8 0.87756 228 6 0.833870 146 8 0.773360 118 5 0.73716 113 7 0.85333 39 4 0.777564 61 5 0.862538 196 8 0.922890 129 5 0.87619 145 7 0.93536 80 5 0.88287 103 5 0.934429 125 7 0.88137 0.85030 0.74860 0.88989 0.77897 0.85217 0.79353 0.84086 0.85730 0.91679 0.85082 0.85093 0.80361 NA 0.92816 0.76867 0.82455 0.87066 0.924034 0.80582 0.905018 0.771962 0.774141 0.873846 0.92716 0.83577 0.880398 0.88233 0.83274 0.88941 0.72448 0.86013 0.797993 0.736899 0.61310 0.7855422 0.753186 0.820416 0.870404 0.87312 0.903659 0.902159 0.882240 2 0.86037 0.87178 0.0054573 5 0.87706 0.88621 -0.0091542 0.669429 0.52214 insignificant 1 1 insignificant 0.72226 0.55291 insignificant 1 1 insignificant -0.00453962 0.811518 insignificant 1 insignificant 0.86037 0.824666 0.067242 5 0.87706 0.829641 0.047415 1.8673e-03 8.7742e-01 weaklyHypermeth 5.8355e-02 1.0000e+00 weaklyHypermeth 1.5788e-03 9.5005e-01 weaklyHypermeth 8.3092e-02 1.0000000 weaklyHypermeth 0.0562635 4.6437e-02 weaklyHypermeth 1.0000e+00 insignificant 0.86037 0.905498 -0.040411 5 0.87706 0.913578 -0.0365218 9.9746e-01 0.00085179 weaklyHypometh 1.0000e+00 0.85179 insignificant 9.9931e-01 0.0038609 weaklyHypometh 1.0000e+00 1 insignificant -0.047779 2.1903e-02 weaklyHypometh 1.0000000 insignificant 0.87178 0.824666 0.0592098 8 0.88621 0.829641 0.0565695 5.3123e-03 9.2770e-01 weaklyHypermeth 1.4358e-01 1.0000e+00 insignificant 1.7059e-02 9.7476e-01 weaklyHypermeth 5.8825e-01 1.000000 insignificant 0.0608031 3.4632e-02 weaklyHypermeth 1.00000000 insignificant 0.87178 0.905498 -0.046991 5 0.88621 0.913578 -0.027368 9.7800e-01 0.001458 weaklyHypometh 1.0000e+00 1 insignificant 9.8401e-01 0.005106 weaklyHypometh 1.0000e+00 1 insignificant -0.0432393 3.6994e-02 weaklyHypometh 1.0000000 insignificant 0.824666 0.905498 -0.108546 5 0.829641 0.91358 -0.0839370 0.99996667 5.0051e-06 weaklyHypometh 1.00000 8.3419e-04 weaklyHypometh 0.9999875 7.8999e-06 weaklyHypometh 1 0.0034739 weaklyHypometh -0.104042 0.00263228 weaklyHypometh 0.376031 insignificant chr6 20907247 20908247 65977 ENSG00000216591 0.69426 85 5 0.56660 104 5 0.65286 35 4 0.76945 76 4 0.48810 20 1 0.63779 105 5 0.63095 28 4 0.61492 52 5 0.72143 30 4 0.52083 29 4 0.64278 85 5 0.75000 10 0 0.78254 35 4 0.72778 23 1 0.79524 25 1 0.58333 9 1 0.00000 1 0 0.586925 91 5 0.61970 56 5 0.68870 108 5 0.43750 9 0 1.00000 4 0 0.582222 35 4 0.36500 21 3 0.64845 39 3 0.62118 83 5 0.85417 18 1 0.65000 12 2 0.66837 50 3 0.67590 101 5 0.582996 91 5 0.73154 94 5 0.401103 79 5 0.824930 68 5 0.60758 50 4 0.83333 7 0 0.404167 53 4 0.716898 75 5 0.811429 61 5 0.49351 73 5 0.56190 85 4 0.70000 31 4 0.650000 56 4 0.69613 0.58766 0.62565 0.74326 0.66288 0.68257 0.55519 0.63903 0.67013 0.60606 0.65900 0.93611 0.75866 0.71591 0.87229 0.57248 NA 0.75812 0.726860 0.69671 0.645340 0.788708 0.593939 0.329545 0.78233 0.59487 0.817322 0.64413 0.71916 0.69693 0.57298 0.71198 0.571707 0.780367 0.63533 0.7202309 0.571212 0.724207 0.828571 0.61983 0.508658 0.672727 0.655303 0 0.68432 0.67684 0.0025062 5 0.49604 0.56282 -0.0667780 0.669835 0.27507 insignificant 1 1 insignificant 0.73730 0.51993 insignificant 1 1 insignificant -0.02773437 0.655796 lowCoverage 1 lowCoverage 0.68520 0.668675 0.007684 5 0.53820 0.473271 0.064928 4.2512e-01 9.4016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4689e-01 9.2572e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0076257 9.3347e-01 lowCoverage 1.0000e+00 lowCoverage 0.68432 0.794118 -0.031884 4 0.49604 0.488424 0.0076127 6.8626e-01 0.24095720 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.2616e-01 0.5041221 lowCoverage 1.0000e+00 1 lowCoverage -0.019659 7.7592e-01 lowCoverage 1.0000000 lowCoverage 0.67684 0.669697 0.0057585 5 0.56282 0.469452 0.0933629 2.0327e-01 7.6629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4046e-01 7.9553e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0201087 8.3416e-01 lowCoverage 1.00000000 lowCoverage 0.67684 0.794118 -0.015613 4 0.56282 0.488424 0.074391 7.0199e-01 0.464002 lowCoverage 1.0000e+00 1 lowCoverage 8.7421e-01 0.725645 lowCoverage 1.0000e+00 1 lowCoverage 0.0080752 9.1432e-01 lowCoverage 1.0000000 lowCoverage 0.669697 0.794118 -0.043731 4 0.469452 0.48842 -0.0189722 0.95740386 2.2668e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.9528292 3.9016e-01 lowCoverage 1 1.0000000 lowCoverage -0.012033 0.90405563 lowCoverage 1.000000 lowCoverage chr6 21304387 21305387 66016 ENSG00000205147 0.621125 228 7 0.521700 182 7 0.701787 117 6 0.691890 161 7 0.580247 55 6 0.675518 313 7 0.663623 117 6 0.714693 136 6 0.602499 95 6 0.678974 86 6 0.717465 203 7 0.728704 47 5 0.765162 146 6 0.773148 20 2 0.7177970 85 6 0.585648 46 5 0.609211 72 5 0.706105 163 7 0.6618619 123 6 0.704861 247 7 0.675595 52 5 0.767196 39 5 0.765828 82 6 0.738946 66 7 0.6629561 49 5 0.6241320 192 7 0.6505102 73 6 0.641557 62 6 0.547168 135 6 0.670432 218 7 0.6452202 213 7 0.684253 348 7 0.6666110 141 7 0.638961 94 6 0.47097 177 7 0.775439 83 6 0.676609 103 7 0.685779 231 7 0.6324426 219 7 0.721945 219 7 0.672166 195 7 0.8095260 163 5 0.625374 216 6 0.679013 0.6676737 0.691813 0.729037 0.634665 0.697800 0.647873 0.704898 0.611327 0.710370 0.630597 0.690988 0.7441286 0.671155 0.7270167 0.702189 0.6268710 0.678672 0.6390480 0.7170729 0.5854729 0.7289157 0.774493 0.702710 0.6505077 0.7253351 0.6387152 0.6790033 0.583278 0.693732 0.6376912 0.711861 0.6911297 0.684835 0.55406310 7.2520e-01 0.6962661 0.658042 0.654836 0.724049 0.685483 0.7564715 0.695408 5 0.700227 0.690647 0.00505205 7 0.609087 0.672561 -0.0634737 0.40429984 0.80349354 insignificant 1.00000 1.000000 insignificant 4.9896e-01 0.5789452 insignificant 1.000000 1 insignificant -0.00171510 0.941630 insignificant 1 insignificant 0.699810 0.6682750 0.0206953 7 0.581526 0.520001 0.0615249 1.3144e-01 7.0501e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1451e-01 7.3433e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0187055 6.8094e-01 insignificant 1.0000e+00 insignificant 0.700380 0.775692 -0.0224711 6 0.676247 0.688107 -0.01186013 6.0271e-01 0.2146047 insignificant 1.0000e+00 1.00000 insignificant 2.4565e-01 0.50693088 insignificant 1.0000e+00 1.00000 insignificant -0.0211898 5.8918e-01 insignificant 1.0000e+00 insignificant 0.691601 0.6682750 0.015788 7 0.702846 0.520001 0.1828450 4.9411e-02 5.4151e-01 weaklyHypermeth 5.1470e-01 1.0000e+00 insignificant 1.0194e-01 4.8365e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02042056 6.6129e-01 insignificant 1.0000e+00 insignificant 0.690633 0.775692 -0.0227627 6 0.665563 0.688107 -0.0225439 7.1917e-01 0.11734301 insignificant 1.0000e+00 1.000000 insignificant 5.7944e-01 0.432892 insignificant 1.0000e+00 1 insignificant -0.0194747 6.2940e-01 insignificant 1.00000000 insignificant 0.6698912 0.775692 -0.0392545 6 0.6685722 0.688107 -0.0195351 7.1608e-01 1.0514e-02 weaklyHypometh 1.0000e+00 2.0615e-01 insignificant 4.1163e-01 2.6075e-02 weaklyHypometh 1.0000e+00 5.9261e-01 insignificant -0.0398953 4.7220e-01 insignificant 1.00000000 insignificant chr6 21431620 21432620 66031 ENSG00000205147 0.730682 336 9 0.820596 219 9 0.698362 138 9 0.839347 229 9 0.953714 42 2 0.875262 293 9 0.972222 38 2 0.886852 87 5 0.824189 88 5 0.768914 76 5 0.909091 132 5 0.914286 13 1 0.893194 102 5 0.733333 16 2 0.8738636 50 2 1.000000 12 0 0.911888 27 2 0.743876 344 9 0.9555556 41 5 0.906256 258 8 0.533333 36 2 0.894404 120 5 0.807694 156 9 0.769841 50 5 0.9429167 89 5 0.8943440 203 9 0.7200000 46 2 0.602694 35 2 0.819816 64 2 0.923777 256 9 0.9181608 218 9 0.812371 327 9 0.6961441 217 9 0.772857 70 5 0.78293 191 6 0.828571 27 1 0.616484 73 5 0.821943 252 9 0.7841600 216 8 0.829172 285 8 0.866083 229 9 0.8423631 185 9 0.726747 289 8 0.846569 0.8003865 0.729634 0.871189 0.893217 0.930664 0.961778 0.837766 0.831472 0.877317 0.859245 0.783851 0.8496981 0.748638 0.8058300 1.000000 0.7885071 0.624502 0.8879227 0.8877617 0.4185507 0.7691010 0.887982 0.807867 0.8653261 0.8206349 0.6848696 0.8393522 0.795933 0.869960 0.8774436 0.876557 0.5365798 0.542857 0.76106232 5.6770e-01 0.7768896 0.664734 0.693445 0.745083 0.767990 0.6466311 0.655569 2 0.810704 0.824341 -0.02195119 8 0.803187 0.796024 0.0071638 0.94058294 0.02356905 weaklyHypometh 1.00000 1.000000 insignificant 8.4191e-01 0.2120261 insignificant 1.000000 1 insignificant 0.05729498 0.193223 insignificant 1 insignificant 0.810704 0.7006061 0.1033946 8 0.803187 0.720363 0.0828244 1.1304e-03 3.2348e-01 weaklyHypermeth 1.5922e-02 1.0000e+00 weaklyHypermeth 7.9607e-02 4.0964e-01 insignificant 8.8820e-01 1.0000e+00 insignificant 0.1074186 2.2388e-02 weaklyHypermeth 4.5004e-01 insignificant 0.810704 0.724855 0.0736602 8 0.803187 0.808850 -0.00566274 6.2115e-02 0.1153538 insignificant 1.0000e+00 1.00000 insignificant 2.0783e-02 0.33747560 weaklyHypermeth 7.1665e-01 1.00000 insignificant 0.0508692 1.3808e-01 insignificant 1.0000e+00 insignificant 0.822793 0.7000000 0.109862 9 0.723658 0.709421 0.0142369 1.6763e-03 8.8957e-01 weaklyHypermeth 2.6064e-02 1.0000e+00 weaklyHypermeth 6.0235e-02 9.1648e-01 insignificant 7.6246e-01 1.0000e+00 insignificant 0.05012367 3.3454e-01 insignificant 1.0000e+00 insignificant 0.822793 0.725083 0.0954007 8 0.723658 0.826227 -0.1025695 7.2454e-03 0.69839081 weaklyHypermeth 2.0701e-01 1.000000 insignificant 1.2418e-02 0.445359 weaklyHypermeth 5.1300e-01 1 insignificant -0.0064258 8.8801e-01 insignificant 1.00000000 insignificant 0.7000000 0.725083 -0.0131684 8 0.7094210 0.826227 -0.1168065 3.3335e-01 7.2513e-02 insignificant 1.0000e+00 9.0132e-01 insignificant 3.8444e-01 4.2262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0565495 2.0801e-01 insignificant 1.00000000 insignificant chr6 21443576 21444576 66035 ENSG00000205147 0.864066 157 5 0.782546 127 8 0.875000 26 2 0.935347 121 5 0.750000 26 3 0.886845 151 5 0.708333 46 5 0.863158 94 5 0.552083 25 1 0.811111 25 1 0.908958 115 5 0.750000 12 0 0.903846 29 1 0.850000 10 0 0.8517857 37 5 0.750000 13 0 1.000000 3 0 0.797973 291 7 0.7888796 109 5 0.841047 186 5 0.878968 28 3 0.916667 12 0 0.869048 77 5 0.489583 28 1 0.8666667 86 2 0.9122024 83 5 0.5468254 54 5 0.733333 14 0 0.789834 59 5 0.890594 92 8 0.9051787 88 5 0.835186 127 5 0.5990909 81 4 0.589583 58 5 0.72727 75 3 1.000000 10 0 0.861351 69 5 0.763079 139 5 0.6170213 109 2 0.930819 79 4 0.770747 138 4 0.7628816 135 2 0.737753 108 4 0.866509 0.7051473 0.711538 0.920574 0.687500 0.821575 0.772436 0.905870 0.616987 0.813034 0.825160 0.686936 0.9249260 0.831731 0.7513736 0.850962 0.9766649 0.913639 0.8597890 0.8631240 0.8546245 0.8763226 0.877976 0.613782 0.8076923 0.8767170 0.7416132 0.6794872 0.786591 0.803343 0.7613420 0.843810 0.6841026 0.724359 0.80769231 9.7045e-01 0.7708049 0.789863 0.842267 0.906333 0.782378 0.8676388 0.766872 0 0.872739 0.847594 0.01262892 5 0.809415 0.818285 -0.0088700 0.26813210 0.78193564 insignificant 1.00000 1.000000 insignificant 2.8838e-01 0.8367128 insignificant 1.000000 1 insignificant 0.02070849 0.663203 lowCoverage 1 lowCoverage 0.872739 0.7939815 0.0599041 5 0.809415 0.683467 0.1259476 8.3804e-05 9.8599e-01 weaklyHypermeth 1.5519e-03 1.0000e+00 weaklyHypermeth 2.4202e-02 9.7540e-01 weaklyHypermeth 3.6408e-01 1.0000e+00 insignificant 0.0668195 3.6113e-01 lowCoverage 1.0000e+00 lowCoverage 0.872739 0.908612 0.0040109 4 0.809415 0.719207 0.09020799 4.9259e-02 0.8213905 lowCoverage 9.4730e-01 1.00000 lowCoverage 2.9588e-01 0.87653426 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0597046 3.1845e-01 lowCoverage 1.0000e+00 lowCoverage 0.847594 0.7939815 0.050454 5 0.818285 0.683467 0.1348176 2.4662e-02 9.9853e-01 weaklyHypermeth 2.8641e-01 1.0000e+00 insignificant 3.1770e-01 9.9428e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04611096 5.6092e-01 lowCoverage 1.0000e+00 lowCoverage 0.847594 0.908612 -0.0029219 4 0.818285 0.719207 0.0990780 6.4658e-01 0.76840775 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.8111e-01 0.727554 lowCoverage 1.0000e+00 1 lowCoverage 0.0389961 5.6245e-01 lowCoverage 1.00000000 lowCoverage 0.7939815 0.908612 -0.0462891 4 0.6834672 0.719207 -0.0357396 9.8660e-01 4.5768e-02 lowCoverage 1.0000e+00 6.7305e-01 lowCoverage 8.3059e-01 2.7136e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0071148 9.3235e-01 lowCoverage 1.00000000 lowCoverage chr6 21932867 21933867 66076 ENSG00000220771 0.786670 165 5 0.629216 109 5 0.652997 79 5 0.856587 117 5 0.707780 69 5 0.735656 248 5 0.722908 84 5 0.726149 141 5 0.809524 55 4 0.606303 57 5 0.630420 206 5 0.587302 46 3 0.810407 105 5 0.777778 19 3 0.7712266 91 5 0.689286 58 4 0.424444 49 3 0.741526 106 5 0.6565208 140 5 0.782431 203 5 0.743490 44 5 0.770000 71 5 0.636991 79 5 0.773889 72 5 0.7419799 53 5 0.7200918 152 5 0.7279589 67 5 0.803333 42 4 0.559524 91 5 0.797803 131 5 0.7385528 171 5 0.798122 291 5 0.7283363 111 5 0.601367 77 5 0.69881 116 5 0.759596 36 3 0.679101 72 5 0.680456 152 5 0.7256479 146 5 0.726475 142 5 0.803915 107 5 0.7746667 115 5 0.759052 151 5 0.871957 0.6940503 0.680747 0.883995 0.716379 0.814943 0.686701 0.804459 0.797619 0.749588 0.829332 0.738874 0.8077936 0.763100 0.7924276 0.693230 0.6500949 0.716273 0.8345857 0.8455298 0.7810165 0.7927310 0.757688 0.767617 0.7301490 0.7751857 0.7977561 0.8334891 0.692590 0.819862 0.8571189 0.790401 0.6923207 0.689174 0.72965161 8.1946e-01 0.7751076 0.763766 0.769344 0.886264 0.823190 0.8267913 0.806165 4 0.778295 0.786392 -0.00621528 5 0.711643 0.737053 -0.0254108 0.81715876 0.50446795 insignificant 1.00000 1.000000 insignificant 9.2161e-01 0.3863752 insignificant 1.000000 1 insignificant -0.02905473 0.346947 lowCoverage 1 lowCoverage 0.778295 0.7287234 0.0543097 5 0.711643 0.675013 0.0366299 1.0207e-04 5.7725e-01 weaklyHypermeth 1.7757e-03 1.0000e+00 weaklyHypermeth 5.0124e-02 4.7460e-01 insignificant 6.4261e-01 1.0000e+00 insignificant 0.0139785 6.6111e-01 lowCoverage 1.0000e+00 lowCoverage 0.778245 0.822995 -0.0307787 5 0.696916 0.656929 0.03998761 7.2526e-01 0.3327173 insignificant 1.0000e+00 1.00000 insignificant 8.4823e-01 0.12712360 insignificant 1.0000e+00 1.00000 insignificant -0.0526947 6.3221e-02 lowCoverage 1.0000e+00 lowCoverage 0.786392 0.7287234 0.059006 5 0.737053 0.675013 0.0620407 1.7069e-04 5.1733e-01 weaklyHypermeth 3.1609e-03 1.0000e+00 weaklyHypermeth 1.6750e-02 6.2075e-01 weaklyHypermeth 2.7460e-01 1.0000e+00 insignificant 0.04303321 1.7642e-01 lowCoverage 1.0000e+00 lowCoverage 0.786284 0.822995 -0.0213361 5 0.726562 0.656929 0.0696335 6.3802e-01 0.24120242 insignificant 1.0000e+00 1.000000 insignificant 8.2645e-01 0.249362 insignificant 1.0000e+00 1 insignificant -0.0236400 3.6770e-01 lowCoverage 1.00000000 lowCoverage 0.7262970 0.822995 -0.0803244 5 0.6208482 0.656929 -0.0360806 9.5435e-01 5.4839e-03 weaklyHypometh 1.0000e+00 1.2753e-01 insignificant 9.8258e-01 5.6843e-02 insignificant 1.0000e+00 9.9725e-01 insignificant -0.0666732 3.4702e-02 lowCoverage 0.78869127 lowCoverage chr6 24991698 24992698 66303 FAM65B ENSG00000111913 0.773225 190 7 0.751326 343 7 0.729004 185 4 0.807047 223 7 0.798380 169 7 0.809930 200 7 0.713602 238 7 0.690274 1142 7 0.792226 570 7 0.753181 152 1 0.722084 209 7 0.666667 42 1 0.728919 729 7 0.651701 358 7 0.7693297 344 7 0.640764 56 4 0.750000 14 1 0.821694 273 4 0.6875298 298 7 0.744402 311 7 0.441364 305 3 0.916667 18 1 0.640226 109 7 0.840607 233 7 0.9130435 109 4 0.8355268 437 7 0.6510378 979 3 0.796970 142 1 0.698345 296 6 0.744032 380 7 0.6977964 246 7 0.760502 494 7 0.7584023 646 7 0.525153 161 4 0.62808 335 7 0.571429 19 0 0.605030 426 7 0.735027 259 7 0.6858534 127 7 0.776825 103 6 0.817687 200 7 0.7403898 152 7 0.642987 168 7 0.805180 0.8189513 0.821137 0.887656 0.884285 0.903654 0.840950 0.888779 0.927253 0.858426 0.755728 0.761905 0.8482784 0.761752 0.8822578 0.790762 0.8463909 0.876918 0.8291201 0.8858354 0.7945439 0.9345316 0.775434 0.923914 0.9232737 0.8965859 0.8458938 0.8436126 0.805790 0.817800 0.8722996 0.874268 0.8529463 0.705257 0.81958204 7.2269e-01 0.7895093 0.813215 0.583736 0.880579 0.860973 0.9160793 0.824286 1 0.906384 0.925560 0.00174543 6 0.724501 0.646575 0.0779260 0.62265998 0.85435301 insignificant 1.00000 1.000000 insignificant 9.2311e-01 0.6037285 insignificant 1.000000 1 insignificant -0.00461218 0.910362 insignificant 1 insignificant 0.906503 0.8884074 0.0297053 7 0.746190 0.667959 0.0782308 4.6860e-03 9.9854e-01 weaklyHypermeth 5.7146e-02 1.0000e+00 weaklyHypermeth 1.6729e-03 9.9945e-01 weaklyHypermeth 4.1130e-02 1.0000e+00 weaklyHypermeth 0.1028777 3.9721e-02 weaklyHypermeth 6.4826e-01 insignificant 0.906503 0.793333 -0.0135445 7 0.746190 0.746671 -0.00048167 8.0121e-01 0.3978569 insignificant 1.0000e+00 1.00000 insignificant 8.8665e-01 0.41183445 insignificant 1.0000e+00 1.00000 insignificant 0.0073157 8.3494e-01 insignificant 1.0000e+00 insignificant 0.926718 0.8884074 0.025406 6 0.711958 0.667959 0.0439992 2.3376e-02 9.9623e-01 weaklyHypermeth 2.7502e-01 1.0000e+00 insignificant 4.6557e-03 9.9951e-01 weaklyHypermeth 9.6993e-02 1.0000e+00 weaklyHypermeth 0.10748983 6.5025e-02 insignificant 9.3869e-01 insignificant 0.926718 0.793333 -0.0072076 6 0.711958 0.746671 -0.0347132 8.6664e-01 0.34002133 insignificant 1.0000e+00 1.000000 insignificant 8.1682e-01 0.608494 insignificant 1.0000e+00 1 insignificant 0.0119279 8.1298e-01 insignificant 1.00000000 insignificant 0.8884074 0.793333 -0.0744144 7 0.6679587 0.746671 -0.0787125 9.8329e-01 1.5673e-02 weaklyHypometh 1.0000e+00 2.8495e-01 insignificant 9.9107e-01 5.7653e-03 weaklyHypometh 1.0000e+00 2.1353e-01 insignificant -0.0955620 8.2085e-02 insignificant 1.00000000 insignificant chr6 25043985 25044985 66304 FAM65B ENSG00000111913 0.126522 331 5 0.135767 370 7 0.401852 165 7 0.250591 295 5 0.244515 92 5 0.415676 319 6 0.241153 209 7 0.190066 243 7 0.126931 169 6 0.240479 211 5 0.361178 295 7 0.171923 125 3 0.059882 135 5 0.310226 129 5 0.1759340 263 5 0.242511 66 5 0.000000 9 1 0.219607 290 5 0.1165950 297 5 0.061242 279 5 0.238595 62 5 0.102328 99 3 0.316256 186 6 0.193541 163 6 0.1429534 305 6 0.1624550 385 7 0.0991158 259 6 0.100511 138 3 0.278175 286 5 0.163458 421 7 0.2524665 384 7 0.273053 293 5 0.7219983 242 7 0.352240 163 5 0.66667 71 5 0.260684 37 5 0.790463 185 5 0.264071 360 7 0.1737750 409 6 0.413293 210 5 0.069543 296 5 0.2845964 195 5 0.196376 251 5 0.163475 0.1448942 0.341561 0.204728 0.167617 0.402655 0.248808 0.184270 0.162403 0.217767 0.370078 0.278987 0.0847477 0.284497 0.1961693 0.289424 0.0106032 0.296200 0.1766697 0.0991174 0.1990185 0.1315343 0.415897 0.216704 0.2139859 0.1959344 0.2048231 0.2417984 0.350536 0.127810 0.2266618 0.296391 0.7259990 0.345583 0.53936034 3.5344e-01 0.6929387 0.389273 0.233002 0.318661 0.115439 0.1736930 0.230612 3 0.212022 0.201275 0.00330308 6 0.403640 0.164918 0.2387217 0.44294814 0.95467488 insignificant 1.00000 1.000000 insignificant 3.1105e-01 0.7746727 insignificant 1.000000 1 insignificant 0.01105688 0.742549 insignificant 1 insignificant 0.211655 0.5028355 -0.2897828 6 0.329094 0.447848 -0.1187532 1.0000e+00 7.9973e-13 hypomethylated 1.0000e+00 1.3329e-10 hypomethylated 1.0000e+00 1.1522e-06 hypomethylated 1.0000e+00 2.8804e-04 hypomethylated -0.3047211 2.6627e-02 weaklyHypometh 4.7548e-01 insignificant 0.211471 0.155033 0.0214115 5 0.233251 0.252442 -0.01919155 4.3255e-01 0.5333994 insignificant 1.0000e+00 1.00000 insignificant 6.4634e-01 0.56689090 insignificant 1.0000e+00 1.00000 insignificant -0.0228840 7.2924e-01 insignificant 1.0000e+00 insignificant 0.201478 0.5028355 -0.293316 6 0.185533 0.447848 -0.2623152 1.0000e+00 9.3085e-12 hypomethylated 1.0000e+00 1.5514e-09 hypomethylated 1.0000e+00 1.1361e-06 hypomethylated 1.0000e+00 5.6804e-04 hypomethylated -0.31577802 2.3522e-02 weaklyHypometh 4.2989e-01 insignificant 0.201816 0.155033 0.0253463 5 0.212037 0.252442 -0.0404052 3.6484e-01 0.17238834 insignificant 1.0000e+00 1.000000 insignificant 6.1268e-01 0.194806 insignificant 1.0000e+00 1 insignificant -0.0339409 6.0544e-01 insignificant 1.00000000 insignificant 0.5076336 0.155033 0.3122796 5 0.5118259 0.252442 0.2593835 1.3517e-05 9.9990e-01 hypermethylated 2.2528e-03 1.0000e+00 hypermethylated 1.7852e-04 1.0000e+00 hypermethylated 7.3288e-02 1.0000e+00 hypermethylated 0.2818371 4.0280e-02 weaklyHypermeth 0.89511160 insignificant chr6 30426755 30427755 66372 ENSG00000218154 0.619203 122 5 0.645249 88 5 0.609091 42 5 0.774381 95 5 0.562169 48 5 0.838606 127 5 0.792857 38 5 0.780045 117 5 0.669006 56 5 0.725000 31 3 0.875714 142 5 0.547619 16 0 0.834503 55 5 0.759740 45 5 0.8000000 70 5 0.406667 20 2 0.500000 18 0 0.848464 95 5 0.8355788 110 5 0.788678 92 5 0.706633 40 5 0.696508 44 5 0.803282 60 2 0.828571 25 2 0.7797619 35 5 0.8460988 103 5 0.8088889 51 4 0.880952 28 3 0.920833 96 5 0.804485 115 5 0.5266738 103 5 0.596375 157 5 0.6020468 84 5 0.625603 47 5 0.54611 112 5 0.900000 10 0 0.730769 33 2 0.635905 114 5 0.8790537 77 5 0.826679 105 5 0.905435 105 5 0.7575758 42 5 0.590960 121 5 0.882302 0.6445837 0.663074 0.849547 0.851006 0.808747 0.837445 0.799287 0.807777 0.774485 0.878258 0.635739 0.8443058 0.800977 0.8276878 0.452234 0.4896907 0.831013 0.8488611 0.9147862 0.8819956 0.7350679 0.808787 0.946392 0.7342293 0.8350167 0.8081329 0.8041237 0.891323 0.770091 0.7856222 0.805215 0.7258740 0.661267 0.76264243 8.6598e-01 0.8255353 0.807936 0.871405 0.826217 0.840055 0.7606998 0.842487 2 0.796076 0.800467 -0.00523754 5 0.527780 0.616139 -0.0883593 0.90415862 0.43895060 insignificant 1.00000 1.000000 insignificant 9.4373e-01 0.1600144 insignificant 1.000000 1 insignificant -0.05596012 0.221583 lowCoverage 1 lowCoverage 0.797193 0.7400000 0.0526780 5 0.586422 0.527515 0.0589068 4.2866e-02 9.5557e-01 weaklyHypermeth 4.6034e-01 1.0000e+00 insignificant 1.8061e-01 6.6023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0372222 5.4765e-01 lowCoverage 1.0000e+00 lowCoverage 0.799151 0.831111 -0.0313327 5 0.559031 0.789809 -0.23077890 9.7333e-01 0.2310391 insignificant 1.0000e+00 1.00000 insignificant 9.8203e-01 0.16376515 insignificant 1.0000e+00 1.00000 insignificant -0.0813124 2.4529e-01 lowCoverage 1.0000e+00 lowCoverage 0.802339 0.7400000 0.061985 5 0.684599 0.527515 0.1570838 4.1633e-03 9.9999e-01 weaklyHypermeth 5.7032e-02 1.0000e+00 weaklyHypermeth 1.4109e-01 9.9899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.09318233 1.6207e-01 lowCoverage 1.0000e+00 lowCoverage 0.803298 0.831111 -0.0268973 5 0.603508 0.789809 -0.1863019 9.8339e-01 0.37022912 insignificant 1.0000e+00 1.000000 insignificant 9.2847e-01 0.481158 insignificant 1.0000e+00 1 insignificant -0.0253522 7.0973e-01 lowCoverage 1.00000000 lowCoverage 0.7449495 0.830735 -0.0854185 5 0.5353771 0.759782 -0.2244052 9.9962e-01 1.5238e-03 weaklyHypometh 1.0000e+00 4.4818e-02 weaklyHypometh 9.9608e-01 1.1278e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1185346 1.5589e-01 lowCoverage 1.00000000 lowCoverage chr6 30956209 30957209 66384 ENSG00000204580 0.106718 614 6 0.069259 495 8 0.156925 250 8 0.022803 459 8 0.011309 348 8 0.066662 677 8 0.052710 311 10 0.023377 267 8 0.031782 165 8 0.009192 242 6 0.038238 265 8 0.163724 111 8 0.010758 169 6 0.079392 157 4 0.0075386 402 8 0.069602 129 8 0.000000 300 2 0.199344 1446 7 0.0015432 354 6 0.010117 475 8 0.029545 45 6 0.000000 87 4 0.056722 396 8 0.000000 114 8 0.0687085 385 8 0.0064139 457 8 0.0205676 544 8 0.000000 86 6 0.063351 265 4 0.012320 475 8 0.0046214 511 8 0.065207 477 8 0.8395691 216 8 0.826487 384 8 0.68653 291 6 0.169898 103 4 0.867021 91 8 0.268923 486 8 0.0012626 453 8 0.146510 449 8 0.030109 541 8 0.0346298 1006 6 0.010141 435 8 0.020169 0.0454489 0.167407 0.010153 0.017707 0.086135 0.047964 0.030493 0.055160 0.018663 0.031685 0.135009 0.0215330 0.062496 0.0153468 0.092132 0.0459901 0.151941 0.0024627 0.0080625 0.0418635 0.0048499 0.072066 0.000000 0.0332844 0.0090161 0.0227748 0.0039882 0.040257 0.025673 0.0095799 0.062603 0.8281626 0.747553 0.90495972 4.5138e-02 0.9009270 0.303251 0.002565 0.022496 0.013269 0.0508504 0.016397 6 0.060118 0.031242 0.02864129 8 0.074961 0.045903 0.0290580 0.00292445 0.99999633 weaklyHypermeth 1.00000 1.000000 insignificant 8.2877e-02 0.9999648 insignificant 1.000000 1 insignificant 0.02926156 0.068759 insignificant 1 insignificant 0.060018 0.5815287 -0.5380660 8 0.056620 0.583128 -0.5265080 1.0000e+00 1.5166e-52 hypomethylated 1.0000e+00 1.5166e-49 hypomethylated 1.0000e+00 3.1886e-18 hypomethylated 1.0000e+00 3.1886e-15 hypomethylated -0.5531888 7.0524e-03 weaklyHypometh 1.9061e-01 insignificant 0.060126 0.028433 0.0320626 8 0.081776 0.082966 -0.00119006 4.7203e-02 0.5219202 weaklyHypermeth 9.2554e-01 1.00000 insignificant 8.4697e-02 0.92287335 insignificant 1.0000e+00 1.00000 insignificant 0.0120192 6.9593e-01 insignificant 1.0000e+00 insignificant 0.031006 0.5811585 -0.577488 8 0.019773 0.530117 -0.5103433 1.0000e+00 1.7871e-29 hypomethylated 1.0000e+00 1.7871e-26 hypomethylated 1.0000e+00 6.5814e-16 hypomethylated 1.0000e+00 6.5814e-13 hypomethylated -0.58245033 5.7852e-03 weaklyHypometh 1.5224e-01 insignificant 0.031250 0.028433 0.0038618 8 0.050076 0.082966 -0.0328896 5.0422e-01 0.91205870 insignificant 1.0000e+00 1.000000 insignificant 8.0360e-01 0.345115 insignificant 1.0000e+00 1 insignificant -0.0172424 5.5887e-01 insignificant 1.00000000 insignificant 0.5815287 0.028125 0.5625310 8 0.5831282 0.066263 0.5168657 5.4961e-14 1.0000e+00 hypermethylated 2.7480e-11 1.0000e+00 hypermethylated 8.4498e-09 1.0000e+00 hypermethylated 8.4498e-06 1.0000e+00 hypermethylated 0.5652079 5.9836e-03 weaklyHypermeth 0.23540709 insignificant chr6 31652288 31653288 66393 ENSG00000204490 0.794388 137 5 0.812998 159 6 0.906250 139 6 0.952212 145 4 0.819671 128 6 0.819904 169 6 0.805694 94 6 0.896051 140 6 0.810897 82 4 0.854876 134 6 0.917261 256 6 0.713709 52 5 0.761706 74 6 0.877897 75 5 0.7361173 169 5 0.800000 51 3 0.865860 255 1 0.752442 158 4 0.9175403 210 3 0.624449 132 4 0.660534 60 3 0.621429 49 4 0.932890 94 6 0.823349 64 5 0.6863946 68 2 0.9283974 221 6 0.6074156 130 5 0.464286 43 2 0.749250 182 5 0.940541 236 6 0.8453652 226 5 0.945595 186 6 0.7322995 135 6 0.584354 84 5 0.71578 200 3 0.604167 20 1 0.631519 154 7 0.813439 159 4 0.8131438 151 5 0.952359 165 5 0.958825 118 4 0.9335130 97 3 0.954375 135 4 0.914244 0.7680908 0.863072 0.942135 0.880873 0.885581 0.913609 0.862469 0.853642 0.813946 0.871704 0.857111 0.7936157 0.743886 0.7430673 0.713274 0.9481146 0.810140 0.8620530 0.8122685 0.8742427 0.7756637 0.921671 0.770040 0.8786346 0.8369650 0.7690421 0.8716814 0.828123 0.893601 0.8400786 0.907323 0.8853257 0.514328 0.46606081 8.9471e-01 0.6713021 0.534807 0.787072 0.937775 0.894805 0.9104115 0.904784 1 0.882267 0.864015 0.00792691 6 0.870516 0.807390 0.0631266 0.09235943 0.67952803 insignificant 1.00000 1.000000 insignificant 2.6854e-01 0.6081357 insignificant 1.000000 1 insignificant 0.05487574 0.286052 lowCoverage 1 lowCoverage 0.882267 0.6804261 0.2085935 6 0.870516 0.657778 0.2127382 9.4039e-11 9.9998e-01 hypermethylated 4.9494e-09 1.0000e+00 hypermethylated 1.6863e-03 9.9883e-01 weaklyHypermeth 4.1130e-02 1.0000e+00 weaklyHypermeth 0.1417374 8.4586e-03 lowCoverage 2.2259e-01 lowCoverage 0.882267 0.891892 -0.0076588 4 0.870516 0.919547 -0.04903085 9.5005e-01 0.1187268 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9816e-01 0.05265994 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1004471 1.6438e-02 lowCoverage 6.8493e-01 lowCoverage 0.864015 0.6804261 0.200271 6 0.807390 0.657778 0.1496116 5.8132e-06 9.9984e-01 hypermethylated 1.3519e-04 1.0000e+00 hypermethylated 1.6363e-02 9.7480e-01 weaklyHypermeth 2.7271e-01 1.0000e+00 insignificant 0.08686165 1.5807e-01 lowCoverage 1.0000e+00 lowCoverage 0.864015 0.891892 -0.0156800 4 0.807390 0.919547 -0.1121574 8.3135e-01 0.01989772 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.7955e-01 0.040313 lowCoverage 1.0000e+00 1 lowCoverage -0.1553229 1.1314e-02 lowCoverage 0.66550388 lowCoverage 0.6804261 0.891892 -0.2037633 4 0.6577781 0.919547 -0.2617691 9.9995e-01 6.1509e-05 lowCoverage 1.0000e+00 3.6182e-03 lowCoverage 9.9996e-01 2.7030e-03 lowCoverage 1.0000e+00 1.2286e-01 lowCoverage -0.2421845 5.1377e-04 lowCoverage 0.05708520 lowCoverage chr6 31810074 31811074 66395 ENSG00000213722 0.081111 65 3 0.030872 284 5 0.064441 324 5 0.000000 14 1 0.063110 269 5 0.112365 116 5 0.069616 462 5 0.050000 284 5 0.042763 325 5 0.053228 290 5 0.161080 291 5 0.067731 407 5 0.096145 331 5 0.000000 16 1 0.1010082 251 5 0.111562 394 5 0.164223 456 4 0.040404 54 4 0.1002108 214 4 0.146465 84 4 0.102101 76 5 0.250000 9 1 0.114591 144 5 0.032051 103 5 0.1500000 10 0 0.0483080 252 5 0.0401722 100 5 0.018182 74 5 0.164410 222 5 0.036416 349 5 0.0508966 291 5 0.190364 122 5 0.0021505 294 5 0.040000 203 5 0.20000 262 4 0.066667 8 0 0.025000 64 5 0.061538 223 5 0.1566667 52 4 0.022222 30 4 0.133333 31 3 0.0000000 23 3 0.200000 16 1 0.104630 0.0370721 0.070842 0.000000 0.072615 0.129630 0.068166 0.050505 0.038490 0.053047 0.158464 0.064291 0.1059300 0.018441 0.1124570 0.114926 0.1778697 0.050658 0.1091847 0.0888430 0.1248090 0.1313107 0.115981 0.021610 0.2121212 0.0408139 0.0497152 0.0068871 0.182068 0.034518 0.0641135 0.206867 0.0016292 0.045455 0.07575758 7.5758e-02 0.0094697 0.069930 0.159091 0.025253 0.101010 0.0000000 0.151515 1 0.052930 0.065639 -0.00619795 5 0.074153 0.079661 -0.0055084 0.90076934 0.25153968 insignificant 1.00000 1.000000 insignificant 8.3682e-01 0.5224836 insignificant 1.000000 1 insignificant -0.02197419 0.373275 lowCoverage 1 lowCoverage 0.052930 0.0085389 0.0442057 5 0.074153 0.026309 0.0478437 1.3211e-06 9.9976e-01 weaklyHypermeth 3.2222e-05 1.0000e+00 weaklyHypermeth 2.1055e-05 9.9960e-01 weaklyHypermeth 1.1697e-03 1.0000e+00 weaklyHypermeth 0.0119242 7.0749e-01 lowCoverage 1.0000e+00 lowCoverage 0.052930 0.125000 -0.0451804 4 0.074153 0.128758 -0.05460561 3.9868e-02 0.0296336 lowCoverage 7.9737e-01 1.00000 lowCoverage 2.7175e-03 0.92572364 lowCoverage 1.3587e-01 1.00000 lowCoverage -0.0246276 5.7040e-01 lowCoverage 1.0000e+00 lowCoverage 0.065639 0.0085389 0.050406 5 0.079661 0.026309 0.0533521 3.9588e-04 9.9945e-01 weaklyHypermeth 6.8255e-03 1.0000e+00 weaklyHypermeth 8.5920e-04 9.9944e-01 weaklyHypermeth 2.8520e-02 1.0000e+00 weaklyHypermeth 0.03389837 3.6416e-01 lowCoverage 1.0000e+00 lowCoverage 0.065639 0.125000 -0.0397145 4 0.079661 0.128758 -0.0490972 1.7044e-01 0.14725932 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.5633e-02 0.941897 lowCoverage 7.7701e-01 1 lowCoverage -0.0026535 9.5425e-01 lowCoverage 1.00000000 lowCoverage 0.0085389 0.125000 -0.0978125 4 0.0263089 0.128758 -0.1024493 9.0855e-01 4.7011e-02 lowCoverage 1.0000e+00 6.8132e-01 lowCoverage 9.3600e-01 4.7059e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0365518 4.7158e-01 lowCoverage 1.00000000 lowCoverage chr6 32146401 32147401 66398 ENSG00000168477 0.495410 125 6 0.397909 123 7 0.829405 61 5 0.397059 145 6 0.485158 30 2 0.602987 216 7 0.619505 57 5 0.608454 123 7 0.475426 81 4 0.443697 96 7 0.547219 108 5 0.640890 47 3 0.250428 203 7 0.530556 42 5 0.4469857 174 7 0.366667 22 1 0.369565 36 1 0.641478 195 6 0.3364681 109 6 0.315111 166 7 0.807978 60 4 0.477871 77 7 0.722125 99 5 0.321429 49 3 0.6650000 55 4 0.5120773 151 5 0.5420401 104 6 0.521164 26 1 0.612734 65 6 0.374936 186 5 0.3749940 144 7 0.705111 150 7 0.4482943 111 7 0.377496 111 6 0.45000 99 4 0.375000 46 4 0.544737 71 5 0.534051 160 7 0.6217466 193 6 0.670052 171 6 0.230382 92 4 0.5750000 195 6 0.578244 166 7 0.511905 0.3142857 0.672395 0.467437 0.347403 0.676298 0.584135 0.473534 0.491995 0.441989 0.635754 0.715839 0.1401606 0.556946 0.3604622 0.589286 0.3830179 0.599090 0.3495671 0.3341702 0.8781308 0.4559624 0.663553 0.449405 0.6098214 0.3835404 0.5630661 0.6020408 0.609565 0.284719 0.3326331 0.661124 0.3583124 0.261850 0.28571429 3.5863e-01 0.2869680 0.292347 0.465638 0.668519 0.313524 0.4642857 0.456419 1 0.489579 0.507309 -0.01805301 7 0.442131 0.580510 -0.1383793 0.92627025 0.63319612 insignificant 1.00000 1.000000 insignificant 9.7361e-01 0.2806001 insignificant 1.000000 1 insignificant -0.06310274 0.256888 insignificant 1 insignificant 0.489805 0.4268908 0.0724273 7 0.505292 0.467348 0.0379437 3.0253e-03 3.0560e-02 weaklyHypermeth 3.8295e-02 1.0000e+00 weaklyHypermeth 1.2085e-03 1.9961e-01 weaklyHypermeth 3.1802e-02 1.0000e+00 weaklyHypermeth 0.0350891 4.2874e-01 insignificant 1.0000e+00 insignificant 0.489805 0.533660 -0.0672631 6 0.505292 0.603616 -0.09832420 9.4638e-01 0.0052224 weaklyHypometh 1.0000e+00 0.48630 insignificant 9.3001e-01 0.05766360 insignificant 1.0000e+00 1.00000 insignificant -0.0450661 6.1373e-01 insignificant 1.0000e+00 insignificant 0.507296 0.4297659 0.082039 7 0.571564 0.585715 -0.0141511 3.1581e-03 1.5900e-01 weaklyHypermeth 4.5116e-02 1.0000e+00 weaklyHypermeth 8.4225e-03 6.6387e-01 weaklyHypermeth 1.5040e-01 1.0000e+00 insignificant 0.09819180 8.4488e-02 insignificant 1.0000e+00 insignificant 0.506885 0.533660 -0.0267380 6 0.520583 0.603616 -0.0830336 8.8318e-01 0.04694601 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.6187e-01 0.388696 insignificant 1.0000e+00 1 insignificant 0.0180367 8.4670e-01 insignificant 1.00000000 insignificant 0.4268908 0.533660 -0.1071747 6 0.4673483 0.603616 -0.1362679 5.6800e-01 8.0394e-04 weaklyHypometh 1.0000e+00 2.6798e-02 weaklyHypometh 6.8079e-01 7.3857e-03 weaklyHypometh 1.0000e+00 2.5468e-01 insignificant -0.0801551 3.8050e-01 insignificant 1.00000000 insignificant chr6 33050241 33051241 66404 ENSG00000204256 0.482588 158 4 0.322576 246 5 0.447808 217 5 0.367303 130 4 0.202999 112 4 0.624916 277 5 0.342311 95 4 0.308388 145 4 0.189534 205 4 0.389728 124 4 0.365148 120 4 0.164493 76 4 0.099860 171 4 0.325734 93 4 0.1780255 161 4 0.165205 73 4 0.170513 57 4 0.214684 117 4 0.4148352 40 4 0.313831 220 5 0.505556 26 3 0.112564 80 4 0.482809 132 5 0.450771 61 4 0.3727273 42 4 0.4228042 244 5 0.2065747 55 4 0.441288 50 4 0.327381 95 4 0.264486 296 5 0.3576478 260 5 0.545296 230 5 0.1027705 282 5 0.000000 28 4 0.16667 44 3 0.000000 12 0 0.025988 121 4 0.153689 240 5 0.3989485 129 4 0.358591 109 5 0.222184 56 4 0.3183333 88 4 0.193138 148 4 0.481053 0.3316435 0.400178 0.461941 0.202181 0.641328 0.346554 0.310596 0.191260 0.391075 0.366213 0.164332 0.1018233 0.329301 0.1793206 0.168237 0.1734568 0.272075 0.4213980 0.3972282 0.5118313 0.1145537 0.483683 0.452951 0.3779882 0.4322727 0.2099041 0.4429012 0.333488 0.268318 0.3012326 0.640694 0.0388737 0.000000 0.13433048 0.0000e+00 0.0262185 0.031016 0.336379 0.285673 0.224861 0.2762731 0.244366 4 0.338033 0.388288 -0.04611716 4 0.360447 0.386585 -0.0261384 0.87633684 0.23851806 lowCoverage 1.00000 1.000000 lowCoverage 9.1870e-01 0.1050196 lowCoverage 1.000000 1 lowCoverage -0.06963478 0.155190 lowCoverage 1 lowCoverage 0.338033 0.0591472 0.2981884 4 0.360447 0.112592 0.2478552 1.4843e-10 9.9962e-01 lowCoverage 7.4213e-09 1.0000e+00 lowCoverage 4.5287e-08 9.9370e-01 lowCoverage 4.1170e-06 1.0000e+00 lowCoverage 0.2296717 8.2095e-05 lowCoverage 5.4730e-03 lowCoverage 0.338033 0.275472 0.0644978 4 0.360447 0.313660 0.04678693 6.9063e-02 0.8408850 lowCoverage 1.0000e+00 1.00000 lowCoverage 1.6356e-01 0.56575300 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0062849 9.0113e-01 lowCoverage 1.0000e+00 lowCoverage 0.388288 0.0591472 0.335192 5 0.386585 0.112592 0.2739936 4.9344e-11 9.9767e-01 hypermethylated 3.2896e-09 1.0000e+00 hypermethylated 1.2567e-07 9.9981e-01 hypermethylated 1.7952e-05 1.0000e+00 hypermethylated 0.29930645 1.6207e-05 lowCoverage 1.6207e-03 lowCoverage 0.388288 0.275472 0.1088862 4 0.386585 0.313660 0.0729253 1.2762e-02 0.88244458 lowCoverage 3.1906e-01 1.000000 lowCoverage 4.4145e-02 0.699953 lowCoverage 1.0000e+00 1 lowCoverage 0.0759197 1.8816e-01 lowCoverage 1.00000000 lowCoverage 0.0591472 0.275472 -0.2300828 4 0.1125915 0.313660 -0.2010683 9.9963e-01 2.9500e-11 lowCoverage 1.0000e+00 7.3751e-09 lowCoverage 9.9999e-01 2.3501e-05 lowCoverage 1.0000e+00 3.9169e-03 lowCoverage -0.2233868 2.1072e-03 lowCoverage 0.14047683 lowCoverage chr6 33260528 33261528 66407 ENSG00000204248 0.743439 76 5 0.606624 158 5 0.765455 71 3 0.758547 98 5 0.559259 33 5 0.628369 142 5 0.638889 31 3 0.858279 102 5 0.777778 38 3 0.670677 60 3 0.838295 175 5 0.504444 27 3 0.664553 121 4 0.884967 47 3 0.7949275 74 3 1.000000 7 1 0.500000 15 2 0.732612 121 5 0.8446154 98 5 0.726416 95 5 0.650000 18 1 0.692222 78 3 0.598168 99 5 0.769841 39 3 0.6388889 43 4 0.7125557 130 5 0.5159191 83 5 0.700000 32 3 0.719510 88 5 0.679349 152 5 0.8676587 136 5 0.887562 102 5 0.6060684 97 5 0.548235 59 5 0.33333 25 1 0.777273 24 2 0.561740 70 4 0.580559 138 5 0.7331868 81 5 0.693745 138 5 0.831561 73 5 0.6495889 79 3 0.868539 83 5 0.598039 0.3688823 0.717023 0.680686 0.636710 0.599575 0.570495 0.777375 0.655773 0.750826 0.823820 0.836819 0.6519608 0.815840 0.6711424 0.912710 0.6519608 0.782924 0.7432127 0.6409537 0.5980392 0.5769608 0.759553 0.967320 0.5378540 0.7186225 0.6262745 0.7313725 0.651403 0.687935 0.7527778 0.878816 0.5849673 0.607612 0.48785033 7.0472e-01 0.5404075 0.548909 0.606443 0.677344 0.688193 0.6629832 0.789612 3 0.735516 0.765000 -0.03001924 5 0.638164 0.653801 -0.0156371 0.77478705 0.39494327 insignificant 1.00000 1.000000 insignificant 5.9570e-01 0.6754403 insignificant 1.000000 1 insignificant 0.02226767 0.598921 lowCoverage 1 lowCoverage 0.735683 0.6077482 0.1276583 5 0.683393 0.537796 0.1455973 3.4912e-03 7.3496e-01 weaklyHypermeth 4.3101e-02 1.0000e+00 weaklyHypermeth 4.9134e-02 7.8056e-01 weaklyHypermeth 6.3811e-01 1.0000e+00 insignificant 0.1570392 4.2948e-02 lowCoverage 6.7106e-01 lowCoverage 0.735683 0.753304 -0.0093734 5 0.683393 0.739129 -0.05573578 7.8933e-01 0.2287347 insignificant 1.0000e+00 1.00000 insignificant 8.0555e-01 0.29080574 insignificant 1.0000e+00 1.00000 insignificant -0.0304168 5.6262e-01 lowCoverage 1.0000e+00 lowCoverage 0.765000 0.6092233 0.160563 5 0.653801 0.614624 0.0391769 1.2812e-03 4.8266e-01 weaklyHypermeth 2.0665e-02 1.0000e+00 weaklyHypermeth 8.2706e-02 8.0888e-01 insignificant 9.9272e-01 1.0000e+00 insignificant 0.13477155 7.3963e-02 lowCoverage 1.0000e+00 lowCoverage 0.765000 0.752759 0.0156051 5 0.653801 0.701862 -0.0480610 3.9984e-01 0.05469553 insignificant 1.0000e+00 1.000000 insignificant 6.8851e-01 0.077698 insignificant 1.0000e+00 1 insignificant -0.0526844 3.3090e-01 lowCoverage 1.00000000 lowCoverage 0.6077482 0.753304 -0.1331037 5 0.5377958 0.739129 -0.2013331 9.2971e-01 3.9560e-02 weaklyHypometh 1.0000e+00 5.9045e-01 insignificant 9.8827e-01 4.0916e-02 weaklyHypometh 1.0000e+00 8.3503e-01 insignificant -0.1874560 2.8271e-02 lowCoverage 0.68953771 lowCoverage chr6 33372527 33373527 66414 PFDN6 ENSG00000204220 0.293056 53 6 0.249234 165 6 0.367677 68 6 0.237302 70 6 0.227834 111 6 0.243849 116 6 0.375975 178 7 0.250000 111 7 0.245003 79 6 0.268707 48 6 0.250650 159 6 0.181122 66 6 0.444444 37 3 0.303571 39 5 0.3675214 64 6 0.100000 62 7 1.000000 2 0 0.448413 44 3 0.3391813 80 6 0.340231 49 3 0.181899 85 5 0.376471 55 6 0.215584 64 6 0.236975 68 5 0.3660604 429 6 0.2244915 188 6 0.2925926 98 6 0.218615 57 6 0.381155 106 6 0.238070 167 6 0.2727663 168 6 0.215986 61 6 0.4704541 140 6 0.522619 144 6 0.20408 144 3 0.394545 243 6 0.558036 70 7 0.428628 192 6 0.2752990 127 6 0.267454 122 6 0.531250 81 6 0.4087302 56 6 0.363636 95 6 0.326687 0.1638172 0.376882 0.211656 0.262209 0.289208 0.267816 0.251534 0.197710 0.333333 0.254135 0.199496 0.5235174 0.355828 0.3323895 0.134093 NA 0.330777 0.3429125 0.3831138 0.3239429 0.3377842 0.272504 0.211837 0.2720562 0.2684302 0.2052293 0.1740100 0.356642 0.258353 0.2449179 0.261613 0.4196524 0.459334 0.30163075 3.6021e-01 0.6237949 0.469024 0.259797 0.321632 0.363190 0.3911043 0.360792 4 0.281074 0.263907 -0.01038343 6 0.300786 0.274350 0.0264365 0.67782087 0.35926289 insignificant 1.00000 1.000000 insignificant 3.6448e-01 0.5143127 insignificant 1.000000 1 insignificant 0.05829970 0.206243 insignificant 1 insignificant 0.281250 0.4008574 -0.1497161 6 0.338384 0.428011 -0.0896264 7.7679e-01 3.8093e-07 weaklyHypometh 1.0000e+00 4.2326e-05 weaklyHypometh 9.2702e-01 1.4928e-05 weaklyHypometh 1.0000e+00 2.1326e-03 weaklyHypometh -0.1030388 1.4018e-01 insignificant 1.0000e+00 insignificant 0.281250 0.343035 -0.0732124 6 0.338384 0.375089 -0.03670512 9.8259e-01 0.0065677 weaklyHypometh 1.0000e+00 0.51338 insignificant 9.9606e-01 0.03305431 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0425855 5.1386e-01 insignificant 1.0000e+00 insignificant 0.265280 0.4008574 -0.140498 6 0.308643 0.428011 -0.1193675 9.9020e-01 1.1021e-04 weaklyHypometh 1.0000e+00 1.2246e-02 weaklyHypometh 9.9872e-01 1.5110e-03 weaklyHypometh 1.0000e+00 1.7621e-01 insignificant -0.16133849 2.3644e-02 weaklyHypometh 4.2989e-01 insignificant 0.265280 0.343035 -0.0599940 6 0.308643 0.375089 -0.0664462 9.9179e-01 0.01148277 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9457e-01 0.027437 weaklyHypometh 1.0000e+00 1 insignificant -0.1008852 1.0807e-01 insignificant 1.00000000 insignificant 0.4008574 0.343035 0.0873328 6 0.4280107 0.375089 0.0529213 3.9831e-02 7.8259e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.1014e-02 8.6999e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0604533 4.1399e-01 insignificant 1.00000000 insignificant chr6 33500626 33501626 66416 SYNGAP1 ENSG00000197283 0.052454 469 9 0.070009 453 10 0.023326 389 12 0.035523 417 9 0.084186 301 11 0.139495 624 11 0.066109 494 13 0.082094 375 10 0.036457 455 10 0.047312 419 11 0.092496 374 11 0.023390 317 11 0.016644 384 10 0.151170 249 4 0.0451576 480 11 0.028446 367 10 0.097538 423 9 0.042904 859 8 0.0240712 434 8 0.017636 468 9 0.045503 158 14 0.127119 186 7 0.067811 364 12 0.036631 220 12 0.1568465 638 7 0.0289665 560 12 0.0029579 446 8 0.028472 194 9 0.081141 351 9 0.039602 600 12 0.0603584 558 11 0.064063 408 12 0.0078538 368 9 0.036300 387 10 0.00000 179 6 0.030303 166 3 0.046750 296 9 0.050150 463 12 0.0405757 521 9 0.065576 508 11 0.010100 537 8 0.0928951 630 7 0.022578 362 9 0.081628 0.0750281 0.051239 0.061270 0.068288 0.190917 0.105641 0.087775 0.076543 0.031678 0.146695 0.046067 0.0236820 0.063693 0.0424974 0.044018 0.0049418 0.028291 0.0329227 0.0478128 0.0018219 0.0441888 0.091917 0.067909 0.0573030 0.0661448 0.0125896 0.0502650 0.072741 0.062115 0.0447962 0.075762 0.0042842 0.005833 0.00088773 9.1101e-03 0.0157017 0.019051 0.029063 0.014321 0.025641 0.0163941 0.047513 3 0.054851 0.059577 0.01209635 11 0.061427 0.054012 0.0074146 0.55102784 0.72506036 insignificant 1.00000 1.000000 insignificant 6.8175e-01 0.7962821 insignificant 1.000000 1 insignificant -0.00280161 0.856138 insignificant 1 insignificant 0.054876 0.0188273 0.0524350 10 0.069617 0.042868 0.0267494 4.3272e-02 6.2072e-02 weaklyHypermeth 4.6034e-01 1.0000e+00 insignificant 6.0531e-03 8.0833e-01 weaklyHypermeth 1.2353e-01 1.0000e+00 insignificant 0.0302615 2.3031e-02 weaklyHypermeth 4.5004e-01 insignificant 0.054870 0.025801 0.0391725 9 0.065266 0.083618 -0.01835166 1.9751e-01 0.9680559 insignificant 1.0000e+00 1.00000 insignificant 2.2720e-01 0.98036812 insignificant 1.0000e+00 1.00000 insignificant 0.0124761 4.9339e-01 insignificant 1.0000e+00 insignificant 0.059615 0.0188273 0.040044 12 0.061214 0.042868 0.0183463 3.4824e-03 9.2155e-01 weaklyHypermeth 4.8367e-02 1.0000e+00 weaklyHypermeth 8.1317e-02 9.9889e-01 insignificant 9.9167e-01 1.0000e+00 insignificant 0.03306307 4.3480e-02 weaklyHypermeth 6.9016e-01 insignificant 0.059126 0.025801 0.0376986 11 0.044888 0.083618 -0.0387296 1.2788e-01 0.99999988 insignificant 1.0000e+00 1.000000 insignificant 5.0808e-01 0.994195 insignificant 1.0000e+00 1 insignificant 0.0152778 4.5144e-01 insignificant 1.00000000 insignificant 0.0188883 0.025822 -0.0058175 11 0.0459296 0.095563 -0.0496334 6.5927e-01 7.9323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9665e-01 3.6507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0177853 3.3606e-01 insignificant 1.00000000 insignificant chr6 33504035 33505035 66417 SYNGAP1 ENSG00000197283 0.249725 74 8 0.184559 325 12 0.126480 380 12 0.223485 58 7 0.098232 126 7 0.308796 73 9 0.207541 123 9 0.141524 120 6 0.091624 127 8 0.177505 134 7 0.201807 246 9 0.080453 136 7 0.106024 192 7 0.333333 6 0 0.0857888 167 7 0.142202 164 9 0.140450 93 7 0.218939 50 5 0.1302588 178 7 0.227249 94 12 0.100000 44 5 0.250000 10 0 0.169589 93 11 0.232143 56 6 NA 0 0 0.0980010 369 12 0.0944444 56 8 0.081746 50 6 0.097171 95 8 0.105002 354 12 0.1298528 263 12 0.121825 59 7 0.0273946 249 12 0.056790 185 9 0.03125 81 7 0.000000 6 0 0.025397 66 8 0.091532 206 12 0.1709126 155 12 0.122176 131 11 0.250000 68 4 0.1797717 88 11 0.222321 124 11 0.278495 0.1931900 0.156263 0.134629 0.108706 0.267563 0.247784 0.125317 0.115224 0.238547 0.235897 0.121510 0.1175238 NA 0.1171223 0.150928 0.1628579 0.249462 0.1608974 0.1834101 0.0967742 0.2106810 0.124872 0.201229 NA 0.1319914 0.0989247 0.0645161 0.151463 0.111499 0.1110076 0.184844 0.0232803 0.053689 0.06451613 5.1392e-04 0.0436935 0.189574 0.235181 0.159636 0.279570 0.2104583 0.195110 0 0.164341 0.116793 0.04383234 11 0.161577 0.113725 0.0478518 0.00026890 0.99969620 weaklyHypermeth 0.26890 1.000000 insignificant 5.0154e-05 0.9896904 weaklyHypermeth 0.050154 1 weaklyHypermeth 0.03927375 0.111462 insignificant 1 insignificant 0.164341 0.0505051 0.1100131 11 0.161577 0.046576 0.1150014 6.5046e-11 1.0000e+00 weaklyHypermeth 3.6136e-09 1.0000e+00 weaklyHypermeth 3.5269e-11 1.0000e+00 weaklyHypermeth 7.0537e-09 1.0000e+00 weaklyHypermeth 0.1350714 2.2624e-06 weaklyHypermeth 2.0567e-04 weaklyHypermeth 0.164341 0.181979 -0.0242905 10 0.161577 0.185667 -0.02408945 5.5838e-01 0.0031586 weaklyHypometh 1.0000e+00 0.48630 insignificant 1.4935e-01 0.15301845 insignificant 1.0000e+00 1.00000 insignificant -0.0152377 5.9103e-01 insignificant 1.0000e+00 insignificant 0.117322 0.0504414 0.067577 12 0.143439 0.042993 0.1004458 1.3189e-06 9.9948e-01 weaklyHypermeth 4.1214e-05 1.0000e+00 weaklyHypermeth 1.5378e-05 9.9999e-01 weaklyHypermeth 1.1829e-03 1.0000e+00 weaklyHypermeth 0.09579769 5.0011e-04 weaklyHypermeth 2.3815e-02 weaklyHypermeth 0.116793 0.181979 -0.0651200 10 0.113725 0.185667 -0.0719412 9.8572e-01 0.00010634 weaklyHypometh 1.0000e+00 0.053171 weaklyHypometh 9.8079e-01 0.027502 weaklyHypometh 1.0000e+00 1 insignificant -0.0545115 8.3808e-02 insignificant 1.00000000 insignificant 0.0505051 0.181979 -0.1331247 10 0.0465756 0.185667 -0.1390909 1.0000e+00 4.5389e-10 weaklyHypometh 1.0000e+00 9.0778e-08 weaklyHypometh 1.0000e+00 1.0377e-06 weaklyHypometh 1.0000e+00 3.4591e-04 weaklyHypometh -0.1503092 7.5888e-04 weaklyHypometh 0.06898894 weaklyHypometh chr6 33515646 33516646 66421 SYNGAP1 ENSG00000197283 0.929418 149 7 0.700000 64 7 0.762461 80 7 0.774077 157 7 0.731122 35 3 0.861436 217 7 0.642361 79 7 0.691583 161 7 0.660534 153 7 0.667463 97 7 0.653621 213 7 0.404762 29 2 0.845455 118 7 0.844048 57 6 0.6801879 86 7 0.663265 23 2 0.674074 27 3 0.875000 122 7 0.8895248 77 7 0.682341 229 7 0.728805 71 7 0.758445 140 7 0.621693 103 7 0.761842 140 7 0.9163265 53 7 0.7787748 72 7 0.7954605 77 7 0.607895 74 6 0.661036 86 7 0.750595 39 6 0.8555556 68 7 0.952885 194 7 0.6489335 75 7 0.738095 28 2 0.74687 105 7 0.857143 11 0 0.567029 70 7 0.907143 53 7 0.7222222 56 7 0.965986 86 7 0.951299 73 6 0.6093750 50 6 0.923129 89 7 0.902945 0.7705479 0.773424 0.888500 0.701321 0.841442 0.710502 0.763044 0.608892 0.714296 0.815841 0.381279 0.8016812 0.809075 0.7265646 0.603718 0.6883562 0.819863 0.8722750 0.7365206 0.6856457 0.7236708 0.757339 0.663663 0.9104697 0.7298763 0.7744179 0.7652507 0.840308 0.736791 0.8991629 0.949556 0.5394039 0.657534 0.72773973 8.9726e-01 0.6895473 0.924658 0.905822 0.964123 0.952210 0.6832192 0.925147 2 0.787851 0.782453 -0.01557986 7 0.612137 0.738052 -0.1259149 0.97782348 0.40661317 insignificant 1.00000 1.000000 insignificant 9.9279e-01 0.1120711 insignificant 1.000000 1 insignificant -0.03413949 0.411618 insignificant 1 insignificant 0.789207 0.6812865 0.0734911 7 0.657930 0.628420 0.0295102 1.6737e-01 6.3076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1372e-01 2.3982e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0125663 8.3446e-01 insignificant 1.0000e+00 insignificant 0.789109 0.912429 -0.1080456 7 0.643115 0.713412 -0.07029674 9.9663e-01 0.0032760 weaklyHypometh 1.0000e+00 0.48630 insignificant 9.9865e-01 0.00551668 weaklyHypometh 1.0000e+00 0.78810 insignificant -0.1027656 2.3404e-01 insignificant 1.0000e+00 insignificant 0.785072 0.6812865 0.086761 7 0.797835 0.628420 0.1694156 2.0280e-01 9.1490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8725e-01 8.7366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02157316 7.2806e-01 insignificant 1.0000e+00 insignificant 0.785520 0.912429 -0.0903786 7 0.764502 0.713412 0.0510901 9.8104e-01 0.01956536 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.7011e-01 0.114781 insignificant 1.0000e+00 1 insignificant -0.0686261 4.1422e-01 insignificant 1.00000000 insignificant 0.6834320 0.920228 -0.2041654 7 0.6444719 0.802588 -0.1581161 9.7201e-01 4.0832e-03 weaklyHypometh 1.0000e+00 1.0470e-01 insignificant 9.6714e-01 1.7958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0901992 3.3746e-01 insignificant 1.00000000 insignificant chr6 33887912 33888912 66443 MLN ENSG00000096395 0.089405 459 6 0.012939 318 6 0.047230 174 6 0.031413 396 6 0.031746 194 6 0.053947 672 6 0.024756 270 6 0.039967 218 6 0.058959 194 6 0.077417 118 6 0.069108 343 6 0.000000 74 4 0.018519 71 6 0.044643 88 6 0.0238095 131 6 0.047619 60 6 NA 0 0 0.012737 476 6 0.0050505 362 6 0.026649 501 6 0.089255 101 6 NA 0 0 0.064123 261 6 0.000000 151 6 0.0000000 22 3 0.0542127 391 6 0.0052083 175 6 0.027778 81 5 0.032982 356 6 0.018170 423 6 0.0254650 476 6 0.046039 475 6 0.1101732 192 6 0.176487 256 6 0.16667 621 6 0.250000 12 0 0.095191 191 6 0.184028 443 6 0.0158815 622 6 0.035820 564 6 0.025194 424 6 0.0205556 580 6 0.021325 478 6 0.070715 0.0097012 0.025032 0.019157 0.014528 0.033553 0.014155 0.030720 0.025248 0.040282 0.053137 0.000000 0.0070621 0.018841 0.0099879 0.018160 NA 0.019125 0.0019260 0.0190408 0.0636059 NA 0.061952 0.000000 0.0000000 0.0382323 0.0023835 0.0127119 0.020579 0.010055 0.0213668 0.035462 0.0751823 0.127992 0.07627119 1.8278e-01 0.0495662 0.084878 0.008550 0.017148 0.015736 0.0083475 0.014623 4 0.028717 0.028159 0.00136530 6 0.041234 0.035688 0.0055461 0.46099363 0.37325088 insignificant 1.00000 1.000000 insignificant 7.1712e-01 0.1218508 insignificant 1.000000 1 insignificant 0.00465843 0.653877 insignificant 1 insignificant 0.028717 0.0676385 -0.0485534 6 0.041234 0.143655 -0.1024213 6.9904e-01 3.5039e-07 weaklyHypometh 1.0000e+00 4.2326e-05 weaklyHypometh 8.2763e-01 7.6990e-04 weaklyHypometh 1.0000e+00 7.6990e-02 weaklyHypometh -0.1260779 2.1019e-03 weaklyHypometh 6.7444e-02 weaklyHypometh 0.028717 0.011244 0.0140861 6 0.041234 0.022928 0.01830631 7.3556e-02 0.8431747 insignificant 1.0000e+00 1.00000 insignificant 4.4107e-01 0.41501226 insignificant 1.0000e+00 1.00000 insignificant 0.0139246 4.5712e-02 weaklyHypermeth 1.0000e+00 insignificant 0.028159 0.0676385 -0.050868 6 0.035688 0.143655 -0.1079674 4.0880e-01 4.1721e-05 weaklyHypometh 1.0000e+00 5.2152e-03 weaklyHypometh 6.5703e-01 1.1263e-02 weaklyHypometh 1.0000e+00 9.3856e-01 insignificant -0.13073637 1.3671e-03 weaklyHypometh 4.7621e-02 weaklyHypometh 0.028159 0.011244 0.0131419 6 0.035688 0.022928 0.0127602 2.3135e-02 0.97362161 weaklyHypermeth 5.2579e-01 1.000000 insignificant 3.6173e-01 0.744635 insignificant 1.0000e+00 1 insignificant 0.0092662 3.3128e-01 insignificant 1.00000000 insignificant 0.0676385 0.011244 0.0554930 6 0.1436553 0.022928 0.1207276 1.8378e-03 8.2359e-01 weaklyHypermeth 1.6707e-01 1.0000e+00 insignificant 1.4268e-02 7.5932e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1400026 1.5027e-03 weaklyHypermeth 0.10733424 insignificant chr6 34001552 34002552 66445 MLN ENSG00000096395 0.892916 265 5 0.856318 340 5 0.894142 175 5 0.902361 225 5 0.922954 164 5 0.897176 330 5 0.927177 266 5 0.916810 193 5 0.880410 151 5 0.933069 141 5 0.889110 224 5 0.979853 99 5 0.915810 170 5 0.823990 85 4 0.9016746 263 5 0.944193 105 5 0.923077 26 2 0.783181 302 5 0.8907720 335 5 0.880120 280 5 0.982308 91 5 0.775613 125 5 0.898160 247 5 0.941286 130 5 0.8788043 71 5 0.9175598 359 5 0.8991387 179 5 0.937138 137 5 0.854927 316 5 0.887548 356 5 0.8978130 326 5 0.942381 336 5 0.4178174 231 5 0.225044 186 5 0.57286 396 4 0.281538 43 4 0.598927 221 5 0.607989 365 5 0.7368856 334 5 0.817957 214 5 0.815434 165 5 0.8132044 224 5 0.690211 170 5 0.902329 0.8497161 0.903548 0.901814 0.909921 0.913683 0.928573 0.908126 0.870432 0.950219 0.888852 0.974202 0.9177133 0.862734 0.9004267 0.922839 0.9045074 0.795880 0.8819563 0.8788883 0.9746120 0.7661032 0.891182 0.946374 0.8966617 0.9130736 0.8912306 0.9530952 0.866292 0.887661 0.8993200 0.938402 0.4318008 0.238486 0.38180250 2.7294e-01 0.5688430 0.599348 0.707984 0.805622 0.805254 0.7877932 0.690865 5 0.892486 0.897493 -0.00572676 5 0.891464 0.897400 -0.0059361 0.88674975 0.49391644 insignificant 1.00000 1.000000 insignificant 8.7320e-01 0.3349115 insignificant 1.000000 1 insignificant -0.00330072 0.854927 lowCoverage 1 lowCoverage 0.892486 0.4188627 0.4643330 5 0.891464 0.460992 0.4304714 1.3885e-30 1.0000e+00 hypermethylated 2.7770e-28 1.0000e+00 hypermethylated 8.3562e-12 1.0000e+00 hypermethylated 2.0890e-09 1.0000e+00 hypermethylated 0.4470602 1.1727e-03 lowCoverage 4.8862e-02 lowCoverage 0.892486 0.752484 0.1355874 5 0.891464 0.773934 0.11752985 3.8792e-13 0.9906287 weaklyHypermeth 7.7583e-11 1.00000 weaklyHypermeth 1.7779e-09 0.99972125 weaklyHypermeth 5.9264e-07 1.00000 weaklyHypermeth 0.1230175 6.4528e-03 lowCoverage 3.8648e-01 lowCoverage 0.897493 0.4188627 0.467961 5 0.897400 0.460992 0.4364075 3.6130e-20 1.0000e+00 hypermethylated 5.1615e-18 1.0000e+00 hypermethylated 1.2051e-10 1.0000e+00 hypermethylated 4.0171e-08 1.0000e+00 hypermethylated 0.45036090 9.8063e-04 lowCoverage 3.9225e-02 lowCoverage 0.897493 0.752484 0.1408029 5 0.897400 0.773934 0.1234659 1.5087e-09 0.99737307 weaklyHypermeth 3.0174e-07 1.000000 weaklyHypermeth 2.0085e-06 0.999989 weaklyHypermeth 3.3476e-04 1 weaklyHypermeth 0.1263182 4.2586e-03 weaklyHypermeth 0.35487967 insignificant 0.4188627 0.752484 -0.3404914 5 0.4609924 0.773934 -0.3129416 9.9999e-01 1.6429e-06 hypomethylated 1.0000e+00 1.4935e-04 hypomethylated 9.9999e-01 8.0907e-05 hypomethylated 1.0000e+00 1.0113e-02 hypomethylated -0.3240427 3.9524e-03 lowCoverage 0.18821059 lowCoverage chr6 34033300 34034300 66446 MLN ENSG00000096395 0.738695 193 5 0.555093 271 7 0.696671 230 8 0.623932 277 8 0.443230 99 6 0.794852 315 8 0.551670 203 8 0.644451 244 7 0.686287 175 5 0.749317 203 4 0.595885 163 7 0.692095 77 4 0.316604 284 4 0.319847 161 4 0.6695527 310 4 0.588636 42 4 0.375000 26 3 0.581478 245 7 0.5651890 193 7 0.491964 157 7 0.716902 97 6 0.609764 110 4 0.732870 114 8 0.676855 82 5 0.7172222 171 8 0.5827998 366 8 0.4700217 133 4 0.679692 58 4 0.507820 255 7 0.496774 336 7 0.6569461 308 8 0.673261 225 8 0.7542704 276 8 0.654273 198 8 0.98648 217 7 0.507505 178 7 0.621314 127 7 0.399504 389 8 0.4579927 298 8 0.596668 191 7 0.444176 200 7 0.5177723 195 7 0.344237 223 8 0.704210 0.6157529 0.660836 0.614187 0.317990 0.746174 0.578807 0.629580 0.551955 0.626770 0.635152 0.517970 0.4048824 0.493631 0.5137544 0.537529 0.4234088 0.683591 0.5394743 0.3891323 0.7066667 0.5849569 0.684040 0.684129 0.6870639 0.5400251 0.5504555 0.6184157 0.572848 0.575701 0.5756631 0.712027 0.8317887 0.789485 0.97652673 5.3426e-01 0.7681210 0.649367 0.355579 0.694560 0.576846 0.5610957 0.408511 4 0.598501 0.614634 -0.01765203 7 0.546941 0.575152 -0.0282111 0.67962576 0.47852829 insignificant 1.00000 1.000000 insignificant 9.3185e-01 0.1103807 insignificant 1.000000 1 insignificant -0.04272141 0.302130 insignificant 1 insignificant 0.599120 0.6851986 -0.1400452 7 0.601635 0.592209 0.0094257 6.3215e-02 1.4527e-07 weaklyHypometh 6.5171e-01 2.0753e-05 weaklyHypometh 4.3138e-01 2.0999e-04 weaklyHypometh 1.0000e+00 2.3332e-02 weaklyHypometh -0.0698686 4.5912e-01 insignificant 1.0000e+00 insignificant 0.599170 0.527552 0.0892787 7 0.606210 0.462341 0.14386994 2.6356e-05 0.9999657 weaklyHypermeth 1.3872e-03 1.00000 weaklyHypermeth 2.0568e-03 0.99791986 weaklyHypermeth 1.1171e-01 1.00000 insignificant 0.1118533 5.9609e-02 insignificant 1.0000e+00 insignificant 0.614463 0.6851986 -0.103767 7 0.532667 0.592209 -0.0595421 1.5857e-01 1.7635e-07 weaklyHypometh 1.0000e+00 2.5193e-05 weaklyHypometh 6.4386e-01 1.7621e-03 weaklyHypometh 1.0000e+00 1.7621e-01 insignificant -0.02714714 7.6655e-01 insignificant 1.0000e+00 insignificant 0.615111 0.527552 0.1113391 7 0.624167 0.462341 0.1618268 5.0841e-06 0.99999736 weaklyHypermeth 4.6219e-04 1.000000 weaklyHypermeth 1.9945e-04 0.999996 weaklyHypermeth 1.4849e-02 1 weaklyHypermeth 0.1545747 1.5550e-02 weaklyHypermeth 0.70680364 insignificant 0.6872279 0.527552 0.2206597 7 0.6527617 0.462341 0.1904211 3.9802e-06 9.9658e-01 hypermethylated 7.9605e-04 1.0000e+00 hypermethylated 4.5417e-04 9.9273e-01 hypermethylated 7.5694e-02 1.0000e+00 hypermethylated 0.1817218 9.0554e-02 insignificant 1.00000000 insignificant chr6 34101436 34102436 66450 MIR1275 ENSG00000221697 0.906818 98 7 0.853088 190 8 0.805592 182 7 0.847222 73 5 0.809120 114 6 0.910688 111 8 0.862485 170 7 0.858044 101 7 0.873778 118 6 0.848959 105 6 0.887248 227 7 0.798584 106 5 0.762783 138 5 1.000000 1 0 0.9301321 121 5 0.833088 103 4 0.721236 150 5 0.496693 38 4 0.6925305 145 7 0.849609 92 4 0.927051 105 5 0.657407 28 2 0.846208 137 9 0.821212 82 6 0.8214286 28 1 0.8876679 241 10 0.8139672 73 5 0.844872 61 5 0.691312 89 4 0.921601 241 10 0.8601358 267 10 0.933427 212 8 0.5522119 177 8 0.548077 131 6 0.55556 174 7 0.695645 159 9 0.678681 102 7 0.585622 239 10 0.6088956 127 7 0.695121 130 8 0.318783 45 2 0.3765664 103 4 0.585714 77 8 0.805796 0.7698617 0.816727 0.775427 0.828929 0.868417 0.858434 0.820910 0.860076 0.857799 0.872673 0.791470 0.7726434 NA 0.8871666 0.754717 0.7296124 0.406822 0.7758518 0.8070048 0.9074770 0.5166667 0.849305 0.853334 0.6846154 0.8671999 0.7675903 0.8828994 0.677485 0.957754 0.8000294 0.878107 0.4347853 0.367030 0.61000222 5.1923e-01 0.6571466 0.494808 0.431767 0.676992 0.351099 0.3895396 0.441209 1 0.823529 0.870205 -0.02701167 6 0.858799 0.866250 -0.0074504 0.46677578 0.06527225 insignificant 1.00000 1.000000 insignificant 4.6009e-01 0.2342085 insignificant 1.000000 1 insignificant -0.00813916 0.813824 insignificant 1 insignificant 0.823529 0.6527495 0.2561106 6 0.858799 0.634708 0.2240915 3.7068e-18 9.9977e-01 hypermethylated 4.1186e-16 1.0000e+00 hypermethylated 1.0007e-07 9.9938e-01 hypermethylated 8.3391e-06 1.0000e+00 hypermethylated 0.2247529 2.8653e-05 hypermethylated 2.3878e-03 hypermethylated 0.823529 0.564315 0.3156383 4 0.858799 0.548185 0.31061445 2.6022e-24 0.9999994 lowCoverage 1.3011e-21 1.00000 lowCoverage 8.0899e-12 0.99999498 lowCoverage 4.0449e-09 1.00000 lowCoverage 0.3103688 9.9011e-03 weaklyHypermeth 5.2111e-01 insignificant 0.870205 0.6527495 0.248709 9 0.866250 0.634708 0.2315420 4.6018e-11 9.9821e-01 hypermethylated 3.2870e-09 1.0000e+00 hypermethylated 4.0569e-06 9.9997e-01 hypermethylated 3.3808e-04 1.0000e+00 hypermethylated 0.23289203 3.0369e-05 hypermethylated 2.5050e-03 hypermethylated 0.870205 0.564315 0.3173080 6 0.866250 0.548185 0.3180649 4.3638e-18 0.99999999 hypermethylated 2.1819e-15 1.000000 hypermethylated 8.6139e-09 0.999990 hypermethylated 4.3069e-06 1 hypermethylated 0.3185080 8.7249e-03 weaklyHypermeth 0.61436718 insignificant 0.6527495 0.564315 0.0077400 6 0.6347077 0.548185 0.0865229 8.4223e-03 2.7204e-01 weaklyHypermeth 5.6149e-01 1.0000e+00 insignificant 3.3028e-02 5.5990e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0856160 3.1592e-01 insignificant 1.00000000 insignificant chr6 34819569 34820569 66471 ENSG00000217130 0.893916 235 4 0.789581 427 5 0.810961 173 5 0.747854 180 3 0.816455 83 5 0.961249 282 3 0.818286 168 5 0.785329 114 5 0.845246 121 5 0.704762 82 5 0.818387 284 5 0.855013 71 3 0.801683 129 5 0.710598 39 2 0.8667941 115 5 0.790966 66 5 0.769444 72 4 0.732722 185 4 0.9044836 267 5 0.813892 227 4 0.869091 46 5 0.916667 31 2 0.829562 183 5 0.861030 71 3 0.8285714 37 3 0.8139338 315 5 0.7138515 82 5 0.791542 63 5 0.922769 245 3 0.904325 316 5 0.8727294 348 5 0.923750 282 4 0.7611058 237 5 0.764571 88 5 0.76300 276 5 0.914141 23 3 0.860184 131 5 0.858884 274 5 0.7495909 309 4 0.837075 250 3 0.564289 172 3 0.9424937 199 3 0.921239 236 3 0.839748 0.8399165 0.828860 0.902983 0.862248 0.929897 0.868105 0.907057 0.788829 0.831802 0.894337 0.869197 0.7921674 0.761030 0.8382233 0.796082 0.7976973 0.823923 0.9017904 0.9117632 0.9493886 0.9055599 0.848710 0.852879 0.8675856 0.9060635 0.7690382 0.8668826 0.877013 0.911946 0.9116805 0.926591 0.7841446 0.718947 0.81937928 9.1465e-01 0.8951068 0.904361 0.910091 0.884780 0.930408 0.9345677 0.862927 3 0.854430 0.878158 -0.02519347 5 0.693062 0.873974 -0.1809114 0.71334793 0.10146227 insignificant 1.00000 1.000000 insignificant 9.1353e-01 0.0609623 insignificant 1.000000 1 insignificant -0.04210403 0.081290 lowCoverage 1 lowCoverage 0.854776 0.8153547 0.0313489 5 0.859729 0.836601 0.0231282 3.6630e-01 7.7554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9470e-01 5.0534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0084341 7.8955e-01 lowCoverage 1.0000e+00 lowCoverage 0.854776 0.891938 -0.0305553 3 0.859729 0.694987 0.16474159 7.2829e-01 0.0601720 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.1051e-01 0.04516459 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0089436 9.0431e-01 lowCoverage 1.0000e+00 lowCoverage 0.878097 0.8151751 0.061071 5 0.848768 0.803921 0.0448475 5.5477e-02 5.5473e-01 insignificant 5.6038e-01 1.0000e+00 insignificant 3.5668e-01 8.0601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03366990 3.2467e-01 lowCoverage 1.0000e+00 lowCoverage 0.878097 0.893471 -0.0031113 3 0.848768 0.833985 0.0147835 3.8303e-01 0.15714133 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.9712e-01 0.401703 lowCoverage 1.0000e+00 1 lowCoverage 0.0510476 5.0754e-01 lowCoverage 1.00000000 lowCoverage 0.8153547 0.891938 -0.0628252 3 0.8366007 0.694987 0.1416134 9.3506e-01 1.7554e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6254e-01 3.3063e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0173777 8.2282e-01 lowCoverage 1.00000000 lowCoverage chr6 34819877 34820877 66472 ENSG00000217130 0.893916 235 4 0.789581 427 5 0.810961 173 5 0.747854 180 3 0.816455 83 5 0.961249 282 3 0.818286 168 5 0.785329 114 5 0.845246 121 5 0.704762 82 5 0.818387 284 5 0.855013 71 3 0.801683 129 5 0.710598 39 2 0.8667941 115 5 0.790966 66 5 0.769444 72 4 0.732722 185 4 0.9044836 267 5 0.813892 227 4 0.869091 46 5 0.916667 31 2 0.829562 183 5 0.861030 71 3 0.8285714 37 3 0.8139338 315 5 0.7138515 82 5 0.791542 63 5 0.922769 245 3 0.904325 316 5 0.8727294 348 5 0.923750 282 4 0.7611058 237 5 0.764571 88 5 0.76300 276 5 0.914141 23 3 0.860184 131 5 0.858884 274 5 0.7495909 309 4 0.837075 250 3 0.564289 172 3 0.9424937 199 3 0.921239 236 3 0.839748 0.8399165 0.828860 0.902983 0.862248 0.929897 0.868105 0.907057 0.788829 0.831802 0.894337 0.869197 0.7921674 0.761030 0.8382233 0.796082 0.7976973 0.823923 0.9017904 0.9117632 0.9493886 0.9055599 0.848710 0.852879 0.8675856 0.9060635 0.7690382 0.8668826 0.877013 0.911946 0.9116805 0.926591 0.7841446 0.718947 0.81937928 9.1465e-01 0.8951068 0.904361 0.910091 0.884780 0.930408 0.9345677 0.862927 3 0.854430 0.878158 -0.02519347 5 0.693062 0.873974 -0.1809114 0.71334793 0.10146227 insignificant 1.00000 1.000000 insignificant 9.1353e-01 0.0609623 insignificant 1.000000 1 insignificant -0.04210403 0.081290 lowCoverage 1 lowCoverage 0.854776 0.8153547 0.0313489 5 0.859729 0.836601 0.0231282 3.6630e-01 7.7554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9470e-01 5.0534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0084341 7.8955e-01 lowCoverage 1.0000e+00 lowCoverage 0.854776 0.891938 -0.0305553 3 0.859729 0.694987 0.16474159 7.2829e-01 0.0601720 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.1051e-01 0.04516459 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0089436 9.0431e-01 lowCoverage 1.0000e+00 lowCoverage 0.878097 0.8151751 0.061071 5 0.848768 0.803921 0.0448475 5.5477e-02 5.5473e-01 insignificant 5.6038e-01 1.0000e+00 insignificant 3.5668e-01 8.0601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03366990 3.2467e-01 lowCoverage 1.0000e+00 lowCoverage 0.878097 0.893471 -0.0031113 3 0.848768 0.833985 0.0147835 3.8303e-01 0.15714133 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.9712e-01 0.401703 lowCoverage 1.0000e+00 1 lowCoverage 0.0510476 5.0754e-01 lowCoverage 1.00000000 lowCoverage 0.8153547 0.891938 -0.0628252 3 0.8366007 0.694987 0.1416134 9.3506e-01 1.7554e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6254e-01 3.3063e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0173777 8.2282e-01 lowCoverage 1.00000000 lowCoverage chr6 34878072 34879072 66473 UHRF1BP1 ENSG00000065060 0.671060 170 5 0.769080 206 5 0.718182 113 5 0.677505 129 5 0.795287 87 5 0.705915 270 5 0.683794 174 5 0.666137 142 5 0.686190 166 5 0.743346 138 5 0.676810 324 5 0.687778 78 5 0.754729 153 5 0.716667 31 5 0.8081979 133 5 0.775397 67 5 0.643847 318 5 0.694465 125 5 0.6092995 139 5 0.699602 234 5 0.657255 97 5 0.694783 120 5 0.820340 109 5 0.611588 95 5 0.7633542 118 5 0.7199507 136 5 0.5737077 91 5 0.606083 103 5 0.650857 101 5 0.750397 101 5 0.7992306 146 5 0.710723 378 5 0.7032863 177 5 0.688319 115 5 0.76450 118 5 0.407424 49 4 0.766057 118 5 0.615694 176 5 0.6758460 209 5 0.729770 126 5 0.642429 104 5 0.6570644 146 5 0.735115 165 5 0.741207 0.8114024 0.730724 0.742132 0.818919 0.773117 0.723455 0.721793 0.715829 0.794722 0.732131 0.723465 0.7968867 0.730683 0.8290556 0.793760 0.6985333 0.739502 0.6842097 0.7634254 0.7350563 0.7477045 0.846609 0.696323 0.7963572 0.7703185 0.6481735 0.6695682 0.661665 0.783479 0.8378623 0.768224 0.7418834 0.731730 0.76557255 4.9721e-01 0.7936994 0.677997 0.752989 0.789907 0.705025 0.7242395 0.788089 5 0.731623 0.743574 -0.00391477 5 0.702180 0.704130 -0.0019493 0.76646356 0.62320203 insignificant 1.00000 1.000000 insignificant 6.3665e-01 0.6852419 insignificant 1.000000 1 insignificant 0.01264195 0.625887 insignificant 1 insignificant 0.731623 0.7065073 0.0220324 5 0.702180 0.689113 0.0130673 3.3339e-02 6.1779e-01 weaklyHypermeth 3.6636e-01 1.0000e+00 insignificant 4.3762e-02 9.0458e-01 weaklyHypermeth 5.7582e-01 1.0000e+00 insignificant 0.0516171 3.9671e-01 lowCoverage 1.0000e+00 lowCoverage 0.731623 0.753333 0.0031110 5 0.702180 0.691526 0.01065450 2.2492e-01 0.3146336 insignificant 1.0000e+00 1.00000 insignificant 1.0305e-01 0.34379047 insignificant 1.0000e+00 1.00000 insignificant 0.0211196 3.7023e-01 insignificant 1.0000e+00 insignificant 0.743574 0.7065073 0.026019 5 0.704130 0.689113 0.0150166 8.2141e-02 6.9863e-01 insignificant 8.1327e-01 1.0000e+00 insignificant 2.1929e-02 7.9493e-01 weaklyHypermeth 3.2248e-01 1.0000e+00 insignificant 0.03897519 5.3376e-01 lowCoverage 1.0000e+00 lowCoverage 0.743574 0.753333 0.0049576 5 0.704130 0.691526 0.0126038 1.7866e-01 0.47217186 insignificant 1.0000e+00 1.000000 insignificant 1.9343e-01 0.278920 insignificant 1.0000e+00 1 insignificant 0.0084776 7.7853e-01 insignificant 1.00000000 insignificant 0.7065073 0.753333 -0.0149016 5 0.6891131 0.691526 -0.0024128 4.7070e-01 2.2223e-02 weaklyHypometh 1.0000e+00 3.4724e-01 insignificant 6.3674e-01 2.4619e-02 weaklyHypometh 1.0000e+00 5.8616e-01 insignificant -0.0304976 6.1806e-01 lowCoverage 1.00000000 lowCoverage chr6 35092491 35093491 66481 ANKS1A ENSG00000064999 0.850897 303 6 0.865360 197 5 0.908867 126 5 0.940103 259 6 0.950202 90 5 0.807410 286 6 0.936809 151 5 0.974745 120 5 0.952778 108 5 0.930021 87 5 0.875223 155 5 0.786773 65 5 0.949121 184 5 NA 0 0 0.9052398 170 5 0.925614 88 5 0.942299 93 5 0.827138 244 5 0.9368506 143 5 0.945444 249 5 0.942904 73 5 0.797522 72 5 0.915843 186 5 0.967251 65 5 0.8617391 109 5 0.9379025 259 5 0.9130123 90 5 0.966667 24 3 0.864846 155 5 0.919736 259 5 0.9683856 252 5 0.949143 307 5 0.0762772 173 5 0.052381 119 5 0.00000 125 5 0.160354 101 6 0.076768 41 5 0.066042 316 6 0.9701773 284 6 0.802584 214 5 0.790674 251 5 0.7893284 256 5 0.859096 341 6 0.914551 0.8618768 0.913946 0.928580 0.955061 0.952867 0.937267 0.975778 0.953867 0.929751 0.874584 0.787781 0.9542821 NA 0.9058888 0.925312 0.9375353 0.790907 0.9205311 0.9361920 0.9444938 0.8115207 0.913180 0.967564 0.8643926 0.9246618 0.9125441 0.9678457 0.856670 0.919714 0.9618515 0.936383 0.0723761 0.046547 0.00000000 1.7802e-01 0.0759037 0.075962 0.964257 0.765317 0.883863 0.7874742 0.844641 5 0.911982 0.925946 -0.01253680 5 0.899979 0.935210 -0.0352313 0.82762021 0.14441402 insignificant 1.00000 1.000000 insignificant 4.1930e-01 0.1124429 insignificant 1.000000 1 insignificant -0.01124270 0.570579 lowCoverage 1 lowCoverage 0.911982 0.0731429 0.8391369 5 0.899979 0.057704 0.8422748 1.2106e-85 1.0000e+00 hypermethylated 1.2106e-82 1.0000e+00 hypermethylated 3.0398e-16 1.0000e+00 hypermethylated 3.0398e-13 1.0000e+00 hypermethylated 0.8338664 1.2525e-10 lowCoverage 1.7893e-08 lowCoverage 0.911982 0.854383 0.0572227 5 0.899979 0.858657 0.04132145 6.8141e-04 0.9984961 weaklyHypermeth 3.0697e-02 1.00000 weaklyHypermeth 2.0024e-03 0.99990159 weaklyHypermeth 1.1171e-01 1.00000 insignificant 0.0634648 1.4234e-01 lowCoverage 1.0000e+00 lowCoverage 0.925946 0.0731429 0.849910 5 0.935210 0.057704 0.8775061 3.2096e-63 1.0000e+00 hypermethylated 3.2096e-60 1.0000e+00 hypermethylated 1.3876e-12 1.0000e+00 hypermethylated 1.3876e-09 1.0000e+00 hypermethylated 0.84510912 1.3554e-11 lowCoverage 1.3554e-08 lowCoverage 0.925946 0.854383 0.0705117 5 0.935210 0.858657 0.0765528 3.4048e-04 0.99997146 weaklyHypermeth 1.5476e-02 1.000000 weaklyHypermeth 5.6606e-03 0.999941 weaklyHypermeth 2.8303e-01 1 insignificant 0.0747075 9.7217e-02 lowCoverage 1.00000000 lowCoverage 0.0731429 0.854383 -0.7830986 5 0.0577041 0.858657 -0.8009533 1.0000e+00 2.6664e-33 hypomethylated 1.0000e+00 2.6664e-30 hypomethylated 1.0000e+00 4.6324e-09 hypomethylated 1.0000e+00 4.6324e-06 hypomethylated -0.7704017 3.5987e-07 hypomethylated 0.00035987 hypomethylated chr6 35133444 35134444 66487 ENSG00000187762 0.927293 312 7 0.771481 229 7 0.941055 255 7 0.962069 271 6 0.973327 173 6 0.904545 85 3 0.975345 207 6 0.944464 213 6 0.942540 137 6 0.960919 205 6 0.969916 200 6 0.972222 130 6 0.907743 147 6 0.931226 100 6 0.8880467 220 6 0.958333 112 6 1.000000 3 0 0.911946 322 6 0.9660949 543 6 0.870677 90 3 0.666667 29 1 0.100000 20 1 0.949126 163 6 0.809524 20 1 0.4000000 16 1 0.9173955 448 7 0.8700000 54 1 0.195652 27 1 0.958930 387 6 0.932351 414 7 0.8936609 309 6 0.972953 182 6 0.7311198 148 7 0.899454 185 6 0.76833 151 7 0.861111 18 1 0.664793 141 6 0.683594 77 2 0.7605339 145 6 0.784449 210 6 0.883595 179 6 0.8234351 239 6 0.814710 158 6 0.826259 0.7452557 0.870491 0.874004 0.957454 0.883992 0.991190 0.856108 0.915244 0.928687 0.944412 0.984149 0.6981933 0.897223 0.8557900 0.986413 0.8945742 0.673229 0.9522581 0.9157132 0.8369565 0.3421294 0.855456 0.670290 0.6619565 0.8643442 0.8993078 0.6581455 0.863621 0.933580 0.8937905 0.917747 0.5682268 0.663028 0.51834599 4.4746e-01 0.4688435 0.620602 0.513130 0.625664 0.654152 0.8845194 0.570920 1 0.933485 0.935203 -0.00410010 6 0.927175 0.900684 0.0264916 0.65447596 0.74627558 insignificant 1.00000 1.000000 insignificant 2.6840e-01 0.9831705 insignificant 1.000000 1 insignificant 0.21177392 0.039902 lowCoverage 1 lowCoverage 0.933468 0.7458333 0.1600688 6 0.916772 0.749846 0.1669258 5.0488e-10 1.0000e+00 weaklyHypermeth 2.2949e-08 1.0000e+00 weaklyHypermeth 5.7475e-04 9.8827e-01 weaklyHypermeth 1.6422e-02 1.0000e+00 weaklyHypermeth 0.1658954 6.5924e-03 lowCoverage 1.8312e-01 lowCoverage 0.933468 0.860365 0.0795225 6 0.916772 0.769842 0.14693020 8.4515e-07 0.9994096 weaklyHypermeth 6.0368e-05 1.00000 weaklyHypermeth 3.8576e-04 0.99965523 weaklyHypermeth 2.4110e-02 1.00000 weaklyHypermeth 0.1206177 1.6985e-03 weaklyHypermeth 1.5441e-01 insignificant 0.935562 0.7458333 0.165056 6 0.922210 0.749846 0.1723640 1.1704e-07 9.9943e-01 weaklyHypermeth 4.8769e-06 1.0000e+00 weaklyHypermeth 1.1176e-02 7.7163e-01 weaklyHypermeth 1.9268e-01 1.0000e+00 insignificant -0.04587854 6.4844e-01 lowCoverage 1.0000e+00 lowCoverage 0.935562 0.860365 0.0885734 6 0.922210 0.769842 0.1523684 1.0811e-04 0.99453983 weaklyHypermeth 6.3594e-03 1.000000 weaklyHypermeth 2.3914e-02 0.980972 weaklyHypermeth 7.7141e-01 1 insignificant -0.0911562 3.4585e-01 lowCoverage 1.00000000 lowCoverage 0.7458333 0.860365 -0.0403134 6 0.7498459 0.769842 -0.0199956 9.0962e-01 4.3753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5994e-01 7.9067e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0452776 3.3543e-01 lowCoverage 1.00000000 lowCoverage chr6 35134740 35135740 66488 ENSG00000187762 0.892411 267 9 0.864769 312 9 0.922176 220 9 0.891297 186 8 0.945238 77 8 0.952088 267 9 0.949355 129 9 0.894772 198 9 0.801090 158 9 0.939582 167 9 0.936498 319 9 0.814550 82 7 0.908432 258 9 NA 0 0 0.9077802 174 9 0.887121 59 8 0.863757 64 3 0.901900 205 8 0.9460519 231 9 0.931022 333 9 0.919843 142 9 0.923077 80 7 0.920390 268 9 0.905210 115 8 0.9526515 45 2 0.9358311 368 9 0.9080991 124 9 0.834737 79 6 0.945654 227 9 0.953525 405 9 0.9481177 385 9 0.920841 442 9 0.7968462 304 9 0.819048 232 9 0.93977 260 7 0.670833 56 8 0.661159 105 9 0.958432 290 9 0.8072311 272 9 0.937857 306 9 0.865547 173 9 0.8939170 264 8 0.968653 293 8 0.913996 0.8747340 0.935531 0.907151 0.964369 0.958454 0.943680 0.898018 0.893587 0.937488 0.945135 0.791248 0.9049042 NA 0.8993411 0.914551 0.8721866 0.931729 0.9343307 0.9251733 0.9208658 0.9151893 0.936115 0.907757 0.9362736 0.9326980 0.9193476 0.9472656 0.945122 0.963197 0.9542687 0.919432 0.8220622 0.842190 0.96195301 7.8867e-01 0.7172704 0.962029 0.821793 0.927845 0.887893 0.8932652 0.960287 4 0.924177 0.938806 -0.01355317 9 0.825969 0.839716 -0.0137466 0.99773286 0.17230955 insignificant 1.00000 1.000000 insignificant 9.9452e-01 0.1620186 insignificant 1.000000 1 insignificant -0.01970558 0.158723 insignificant 1 insignificant 0.924676 0.8412189 0.0835756 9 0.917743 0.826859 0.0908841 1.6794e-06 7.9060e-01 weaklyHypermeth 3.9987e-05 1.0000e+00 weaklyHypermeth 1.4593e-02 3.7220e-01 weaklyHypermeth 2.3924e-01 1.0000e+00 insignificant 0.0949437 1.2790e-01 insignificant 1.0000e+00 insignificant 0.924676 0.902141 0.0271317 9 0.917743 0.887656 0.03008710 6.1767e-02 0.9963644 insignificant 1.0000e+00 1.00000 insignificant 1.2197e-01 0.95886308 insignificant 1.0000e+00 1.00000 insignificant 0.0079846 7.9959e-01 insignificant 1.0000e+00 insignificant 0.939156 0.8412189 0.098806 9 0.933017 0.826859 0.1061581 9.3541e-06 9.5447e-01 weaklyHypermeth 2.0787e-04 1.0000e+00 weaklyHypermeth 6.8738e-03 8.8531e-01 weaklyHypermeth 1.3478e-01 1.0000e+00 insignificant 0.11464926 7.8112e-02 insignificant 1.0000e+00 insignificant 0.939156 0.902141 0.0411418 9 0.933017 0.887656 0.0453611 2.9199e-04 0.99987238 weaklyHypermeth 1.3904e-02 1.000000 weaklyHypermeth 1.5784e-02 0.994808 weaklyHypermeth 5.8460e-01 1 insignificant 0.0276901 3.9386e-01 insignificant 1.00000000 insignificant 0.8412189 0.902141 -0.0543890 9 0.8268592 0.887656 -0.0607970 2.9588e-01 1.4804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9852e-01 3.3103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0869591 1.8078e-01 insignificant 1.00000000 insignificant chr6 35797815 35798815 66518 ENSG00000223063 0.830144 200 7 0.724362 179 8 0.760043 157 4 0.787750 157 3 0.645238 45 3 0.813964 249 7 0.830819 94 3 0.729326 158 7 0.873874 82 3 0.728236 94 7 0.791940 201 7 0.900966 55 3 0.784992 98 7 0.833333 12 0 0.7043908 96 7 0.611111 42 2 0.751020 72 7 0.701047 216 7 0.6029236 75 7 0.822338 191 7 0.589269 64 3 0.804826 95 3 0.677926 159 5 0.745150 83 3 0.7626404 84 7 0.8170369 202 8 0.8509443 134 7 0.693878 51 3 0.700542 67 2 0.838646 220 8 0.8366880 228 8 0.807616 235 8 0.5942981 169 8 0.736993 124 7 0.46308 231 7 0.694444 52 3 0.686281 96 7 0.639152 176 8 0.7294271 209 8 0.729078 203 8 0.739961 169 8 0.6703547 147 4 0.809957 202 8 0.844823 0.8078755 0.834978 0.871425 0.816966 0.857305 0.899888 0.852331 0.869188 0.863344 0.867973 0.838800 0.8372062 0.887206 0.8516297 0.801694 0.8568012 0.831254 0.7927027 0.8888067 0.7190027 0.7945239 0.848395 0.881451 0.8554033 0.8910670 0.8925330 0.8366432 0.814212 0.863077 0.8843576 0.873933 0.6723860 0.708899 0.46042042 7.3754e-01 0.6241120 0.646600 0.814583 0.844471 0.822048 0.7534228 0.887533 3 0.836636 0.852035 -0.01739148 7 0.725905 0.770896 -0.0449909 0.98624335 0.08995241 insignificant 1.00000 1.000000 insignificant 8.2310e-01 0.4385313 insignificant 1.000000 1 insignificant 0.00096069 0.974428 insignificant 1 insignificant 0.837882 0.6037736 0.2206450 7 0.757721 0.615174 0.1425473 5.1007e-14 6.7449e-01 hypermethylated 4.2505e-12 1.0000e+00 hypermethylated 1.5259e-04 7.6921e-01 hypermethylated 6.2065e-03 1.0000e+00 hypermethylated 0.1256832 2.3402e-02 weaklyHypermeth 4.5004e-01 insignificant 0.838408 0.826882 0.0146701 7 0.806177 0.798135 0.00804180 3.7763e-01 0.8692055 insignificant 1.0000e+00 1.00000 insignificant 1.8308e-01 0.73081363 insignificant 1.0000e+00 1.00000 insignificant 0.0256355 3.9368e-01 insignificant 1.0000e+00 insignificant 0.853234 0.6037736 0.251493 8 0.794373 0.615174 0.1791992 3.4973e-12 9.3987e-01 hypermethylated 3.4973e-10 1.0000e+00 hypermethylated 1.5275e-04 8.7720e-01 hypermethylated 8.0392e-03 1.0000e+00 hypermethylated 0.12472248 2.5616e-02 weaklyHypermeth 4.5742e-01 insignificant 0.853160 0.826882 0.0339086 8 0.802165 0.798135 0.0040300 1.3853e-01 0.98039351 insignificant 1.0000e+00 1.000000 insignificant 1.7169e-01 0.971944 insignificant 1.0000e+00 1 insignificant 0.0246748 4.5843e-01 insignificant 1.00000000 insignificant 0.6037736 0.826509 -0.2045195 8 0.6151740 0.747669 -0.1324950 3.1868e-01 9.7711e-06 hypomethylated 1.0000e+00 6.9794e-04 hypomethylated 4.3796e-01 2.3484e-03 weaklyHypometh 1.0000e+00 1.1183e-01 insignificant -0.1000477 6.1405e-02 insignificant 1.00000000 insignificant chr6 36867697 36868697 66547 ENSG00000214771 0.847302 204 5 0.757605 199 5 0.804667 227 5 0.732030 200 5 0.808824 77 5 0.819447 387 5 0.774999 179 5 0.873473 143 5 0.877812 261 5 0.846624 276 5 0.929035 141 5 0.849459 165 5 0.714684 219 5 0.851623 171 5 0.8387695 256 5 0.960326 179 5 0.895009 88 5 0.793855 233 5 0.9065469 128 5 0.764123 243 5 0.863880 80 6 0.761165 156 5 0.914397 236 5 0.693452 145 6 0.9753333 98 5 0.8847286 171 5 0.8683158 200 5 0.794747 153 5 0.727754 169 5 0.885616 204 5 0.7234637 159 5 0.726496 242 5 0.7182070 146 5 0.420058 93 5 0.83998 132 3 0.790909 28 2 0.743532 255 5 0.234493 179 5 0.8179805 219 5 0.763349 174 5 0.810078 173 5 0.8140925 158 5 0.872552 175 5 0.841334 0.7991435 0.786456 0.889136 0.729172 0.919769 0.920864 0.877116 0.876479 0.863522 0.925013 0.926504 0.8656234 0.865371 0.8494720 0.949304 0.8895264 0.765582 0.9130149 0.9201071 0.9486783 0.7516844 0.900379 0.847374 0.9673906 0.8991016 0.8801015 0.9583434 0.878572 0.886225 0.8636391 0.874230 0.7331191 0.528717 0.72658777 7.5021e-01 0.8936126 0.314497 0.817965 0.757379 0.807253 0.8496671 0.849468 5 0.872485 0.875807 -0.00757688 5 0.784649 0.753274 0.0313752 0.55560669 0.60376035 insignificant 1.00000 1.000000 insignificant 6.8901e-01 0.5079474 insignificant 1.000000 1 insignificant 0.01403156 0.647864 insignificant 1 insignificant 0.872485 0.6926771 0.1755754 5 0.784649 0.601407 0.1832423 1.4978e-08 9.9997e-01 weaklyHypermeth 5.1647e-07 1.0000e+00 weaklyHypermeth 8.0765e-04 9.8564e-01 weaklyHypermeth 2.1828e-02 1.0000e+00 weaklyHypermeth 0.2077807 8.8878e-02 lowCoverage 1.0000e+00 lowCoverage 0.872485 0.814238 0.0578234 5 0.784649 0.846921 -0.06227178 1.9061e-03 0.7892158 weaklyHypermeth 7.6246e-02 1.00000 weaklyHypermeth 3.5489e-03 0.91984254 weaklyHypermeth 1.6899e-01 1.00000 insignificant 0.0167004 4.7676e-01 insignificant 1.0000e+00 insignificant 0.875807 0.6926771 0.181858 5 0.753274 0.601407 0.1518671 4.4461e-06 9.9822e-01 weaklyHypermeth 1.0844e-04 1.0000e+00 weaklyHypermeth 1.2503e-03 9.7849e-01 weaklyHypermeth 3.7114e-02 1.0000e+00 weaklyHypermeth 0.19374912 1.0843e-01 lowCoverage 1.0000e+00 lowCoverage 0.875807 0.814238 0.0654797 5 0.753274 0.846921 -0.0936470 3.8271e-03 0.45296896 weaklyHypermeth 1.3042e-01 1.000000 insignificant 4.6097e-03 0.868732 weaklyHypermeth 2.5610e-01 1 insignificant 0.0026689 9.3389e-01 insignificant 1.00000000 insignificant 0.6926771 0.814238 -0.1090463 5 0.6014066 0.846921 -0.2455141 9.8134e-01 6.9027e-03 weaklyHypometh 1.0000e+00 1.4722e-01 insignificant 8.0580e-01 7.6585e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1910802 1.1090e-01 lowCoverage 1.00000000 lowCoverage chr6 37134669 37135669 66551 FGD2 ENSG00000146192 0.019287 459 5 0.068909 392 7 0.104430 368 6 0.039071 433 6 0.054506 229 6 0.196682 536 7 0.026809 408 6 0.020588 395 6 0.011757 495 6 0.010853 352 6 0.140898 359 7 0.068320 216 6 0.022988 328 6 0.222222 63 2 0.0080186 449 6 0.079001 269 6 0.014491 367 5 0.074308 509 6 0.1654175 253 5 0.055759 398 6 0.126859 156 6 0.015781 244 6 0.178483 232 7 0.073909 151 6 0.0039683 180 6 0.0824652 496 7 0.0066445 291 6 0.005000 110 6 0.093689 365 6 0.043267 609 7 0.1582806 508 7 0.043672 522 6 0.0110453 362 7 0.000000 212 5 0.00000 127 2 0.000000 58 5 0.002442 194 7 0.000000 506 7 0.0998887 425 6 0.084100 464 6 0.050164 500 5 0.0072777 456 5 0.065975 504 7 0.033761 0.0416762 0.049686 0.021069 0.039785 0.039115 0.049548 0.030321 0.020703 0.013282 0.077108 0.089554 0.0329407 0.015851 0.0183600 0.058940 0.0221567 0.042805 0.0482675 0.0279555 0.0648906 0.0124323 0.051277 0.023833 0.0041010 0.0148972 0.0233474 0.0200787 0.048326 0.009495 0.0176332 0.070501 0.0131050 0.000000 0.00000000 2.4606e-05 0.0085807 0.000000 0.032650 0.026530 0.023179 0.0139761 0.040133 5 0.037241 0.033911 0.00551454 6 0.183866 0.175781 0.0080849 0.37370643 0.85614102 insignificant 1.00000 1.000000 insignificant 1.0349e-01 0.9952806 insignificant 1.000000 1 insignificant 0.00088103 0.969327 insignificant 1 insignificant 0.037108 0.0041124 0.0359841 6 0.081849 0.002690 0.0791588 2.0614e-08 1.0000e+00 weaklyHypermeth 6.4420e-07 1.0000e+00 weaklyHypermeth 1.4503e-08 1.0000e+00 weaklyHypermeth 1.6114e-06 1.0000e+00 weaklyHypermeth 0.0679680 1.5181e-04 weaklyHypermeth 8.4341e-03 weaklyHypermeth 0.037022 0.031942 0.0049086 5 0.079256 0.077309 0.00194701 1.2274e-01 0.0173174 inconclusive 1.0000e+00 1.00000 insignificant 1.2899e-01 0.35850323 insignificant 1.0000e+00 1.00000 insignificant 0.0087347 6.9167e-01 insignificant 1.0000e+00 insignificant 0.033661 0.0041124 0.030372 7 0.072753 0.002690 0.0700633 7.7605e-05 9.9975e-01 weaklyHypermeth 1.5521e-03 1.0000e+00 weaklyHypermeth 1.1707e-04 9.9980e-01 weaklyHypermeth 6.8866e-03 1.0000e+00 weaklyHypermeth 0.06708697 2.7818e-03 weaklyHypermeth 8.4297e-02 weaklyHypermeth 0.033454 0.031942 0.0021117 6 0.059337 0.077309 -0.0179717 5.4091e-01 0.00589776 inconclusive 1.0000e+00 1.000000 insignificant 9.3963e-01 0.069751 insignificant 1.0000e+00 1 insignificant 0.0078537 7.4543e-01 insignificant 1.00000000 insignificant 0.0041152 0.031942 -0.0293335 6 0.0030743 0.077309 -0.0742345 1.0000e+00 2.2912e-06 weaklyHypometh 1.0000e+00 1.9094e-04 weaklyHypometh 1.0000e+00 4.8731e-06 weaklyHypometh 1.0000e+00 1.0302e-03 weaklyHypometh -0.0592333 2.0001e-02 weaklyHypometh 0.55559619 insignificant chr6 37206686 37207686 66557 FGD2 ENSG00000146192 0.805827 320 6 0.792034 317 6 0.606638 200 6 0.743555 264 6 0.782967 93 6 0.912517 413 6 0.862834 182 6 0.873482 194 6 0.815791 150 6 0.897597 128 6 0.852074 308 6 0.754040 72 5 0.655362 182 6 0.788012 43 3 0.7062494 142 6 0.757891 52 4 0.879386 55 4 0.595842 255 5 0.6002986 238 6 0.798073 332 6 0.826339 62 6 0.268313 153 6 0.814092 276 6 0.726880 114 6 0.6263095 65 6 0.8719524 397 6 0.7179906 125 6 0.796131 44 4 0.826705 265 6 0.816453 450 6 0.6830315 393 6 0.807184 461 6 0.1544671 371 6 0.213262 157 6 0.23658 324 6 0.489927 38 4 0.198444 224 6 0.411524 370 6 0.3375912 280 6 0.332079 303 6 0.275883 279 6 0.3059641 222 6 0.394550 249 6 0.797114 0.7836747 0.615738 0.763670 0.763128 0.926990 0.868113 0.881669 0.802445 0.875039 0.886318 0.704942 0.6824237 0.866215 0.7354073 0.810557 0.8044752 0.582194 0.6405505 0.8250499 0.8504645 0.2951952 0.824378 0.796832 0.5879309 0.8589070 0.7671178 0.7539207 0.787893 0.830180 0.7115908 0.804684 0.1568003 0.148911 0.22351799 4.1712e-01 0.2157631 0.326974 0.340462 0.330897 0.293380 0.3524664 0.415510 4 0.791117 0.771480 0.01882480 6 0.785756 0.759073 0.0266830 0.23103833 0.77409977 insignificant 1.00000 1.000000 insignificant 4.5224e-01 0.7850917 insignificant 1.000000 1 insignificant 0.04224173 0.426486 insignificant 1 insignificant 0.791117 0.2486523 0.5479799 6 0.785756 0.246837 0.5389192 9.1379e-42 1.0000e+00 hypermethylated 2.2845e-39 1.0000e+00 hypermethylated 3.0761e-13 1.0000e+00 hypermethylated 1.5380e-10 1.0000e+00 hypermethylated 0.4899897 9.2111e-05 hypermethylated 5.7570e-03 hypermethylated 0.791117 0.401350 0.4177574 6 0.785756 0.339321 0.44643482 4.8348e-35 1.0000000 hypermethylated 4.8348e-32 1.00000 hypermethylated 2.7615e-15 1.00000000 hypermethylated 2.7615e-12 1.00000 hypermethylated 0.4448100 1.4374e-10 hypermethylated 1.4374e-07 hypermethylated 0.771480 0.2486523 0.525819 6 0.759073 0.246837 0.5122362 1.8801e-26 1.0000e+00 hypermethylated 4.7004e-24 1.0000e+00 hypermethylated 6.4453e-10 1.0000e+00 hypermethylated 1.6113e-07 1.0000e+00 hypermethylated 0.44774792 4.4114e-05 hypermethylated 3.1510e-03 hypermethylated 0.771480 0.401350 0.4010901 6 0.759073 0.339321 0.4197518 9.2692e-22 1.00000000 hypermethylated 9.2692e-19 1.000000 hypermethylated 2.7578e-10 1.000000 hypermethylated 2.7578e-07 1 hypermethylated 0.4025683 1.5224e-06 hypermethylated 0.00083975 hypermethylated 0.2486523 0.401350 -0.1349790 6 0.2468365 0.339321 -0.0924843 9.6303e-01 4.9620e-03 weaklyHypometh 1.0000e+00 1.2103e-01 insignificant 8.0541e-01 8.6019e-03 weaklyHypometh 1.0000e+00 2.8673e-01 insignificant -0.0451797 4.6597e-01 insignificant 1.00000000 insignificant chr6 37767853 37768853 66587 ENSG00000204110 0.424286 167 5 0.342803 188 5 0.435979 162 5 0.140000 135 4 0.455418 79 5 0.461630 200 7 0.373387 136 5 0.287675 163 5 0.306300 190 5 0.396156 153 5 0.452255 165 5 0.384000 142 5 0.286067 169 5 0.000000 6 1 0.2958562 148 5 0.416667 93 5 0.312505 185 5 0.094545 122 3 0.3006609 123 7 0.293617 158 5 0.352816 98 5 0.010870 85 2 0.429644 135 5 0.342564 59 5 0.3051568 77 2 0.2783169 227 7 0.4044530 94 5 0.532418 63 5 0.334113 126 5 0.207958 232 7 0.2442595 197 7 0.413563 229 7 0.4630769 157 5 0.523810 124 5 0.33333 325 6 0.312454 98 4 0.430403 83 4 0.221868 231 7 0.3820744 253 5 0.248061 195 6 0.102556 110 3 0.4864346 143 3 0.266034 163 2 0.116293 0.1264812 0.144907 0.079787 0.122347 0.188944 0.077513 0.052447 0.111798 0.140992 0.167329 0.128100 0.0562559 NA 0.0815269 0.102608 0.1467241 0.138544 0.0504487 0.1338948 0.1088961 0.0472846 0.083909 0.079801 0.1566246 0.0746182 0.0995279 0.2610311 0.132804 0.094099 0.0924699 0.145237 0.0802983 0.047376 0.02367347 6.9616e-02 0.0279865 0.026123 0.054266 0.076393 0.085074 0.0548372 0.040124 2 0.255983 0.263125 -0.01206357 5 0.282239 0.310897 -0.0286587 0.62437793 0.22192632 insignificant 1.00000 1.000000 insignificant 6.3578e-01 0.5794683 insignificant 1.000000 1 insignificant 0.00164610 0.972401 lowCoverage 1 lowCoverage 0.256241 0.2677165 -0.0673085 4 0.371959 0.396517 -0.0245580 1.0321e-03 2.6001e-06 lowCoverage 1.4958e-02 2.6001e-04 lowCoverage 2.3971e-03 4.2450e-02 lowCoverage 5.5748e-02 1.0000e+00 lowCoverage -0.0578338 3.0507e-01 lowCoverage 1.0000e+00 lowCoverage 0.256241 0.075319 0.0709712 3 0.371959 0.342582 0.02937660 6.8188e-03 0.5497991 lowCoverage 2.1693e-01 1.00000 lowCoverage 1.0823e-02 0.73184903 lowCoverage 4.1629e-01 1.00000 lowCoverage 0.0259583 7.2669e-01 lowCoverage 1.0000e+00 lowCoverage 0.263255 0.2657480 -0.050163 4 0.297365 0.241348 0.0560163 2.4917e-02 1.9190e-03 lowCoverage 2.8641e-01 1.5991e-01 lowCoverage 2.3021e-02 1.1908e-01 lowCoverage 3.3364e-01 1.0000e+00 lowCoverage -0.05947989 3.3525e-01 insignificant 1.0000e+00 insignificant 0.263418 0.074246 0.0626124 3 0.334535 0.342582 -0.0080470 3.1359e-02 0.52780186 lowCoverage 6.1655e-01 1.000000 lowCoverage 6.6200e-02 0.421986 lowCoverage 1.0000e+00 1 lowCoverage 0.0243122 7.5609e-01 lowCoverage 1.00000000 lowCoverage 0.2674533 0.076389 -0.0011380 4 0.3524595 0.415629 -0.0631692 4.1101e-01 8.4237e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4855e-01 3.8996e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0837921 3.2331e-01 lowCoverage 1.00000000 lowCoverage chr6 38433625 38434625 66673 BTBD9 ENSG00000183826 0.948237 150 6 0.925362 175 6 0.898990 59 5 0.887626 27 1 0.850000 39 3 0.924032 122 6 0.686299 43 3 0.902865 119 6 0.910974 92 6 0.934795 124 6 0.916133 244 6 0.619444 23 1 0.959210 180 6 NA 0 0 0.9149603 97 6 1.000000 8 1 0.916667 19 1 0.979167 44 3 0.9867236 179 6 0.980672 111 6 0.979167 35 3 0.875000 21 1 0.902512 122 6 0.972028 57 6 1.0000000 12 0 0.9284032 287 6 0.8563034 82 6 1.000000 13 1 0.945933 188 6 0.946210 240 6 0.9453329 276 6 0.924714 246 6 0.8689296 203 6 0.824578 167 6 0.83463 140 6 0.787879 24 1 0.936842 32 2 0.912927 307 6 0.9561835 77 6 0.919306 170 6 0.856019 55 4 0.9924242 43 3 0.940140 64 4 0.909750 0.8463057 0.846816 0.911008 0.856627 0.927620 0.704049 0.767859 0.914482 0.942798 0.948989 0.799799 0.9257863 NA 0.9146070 0.960959 0.9598394 0.983434 0.9894428 0.9648881 0.9834337 0.8534137 0.936836 0.940686 0.9939009 0.9349551 0.7871872 0.9708305 0.934549 0.946326 0.9416202 0.933611 0.8391733 0.759621 0.79915332 8.3242e-01 0.9411541 0.891972 0.926083 0.928365 0.872657 0.9720701 0.937504 1 0.925606 0.933502 -0.00764928 6 0.928875 0.936127 -0.0072516 0.82686446 0.50805614 insignificant 1.00000 1.000000 insignificant 9.1959e-01 0.4062041 insignificant 1.000000 1 insignificant -0.03741489 0.156569 lowCoverage 1 lowCoverage 0.925606 0.8636884 0.0645061 6 0.928875 0.871899 0.0569758 4.6408e-04 9.9576e-01 weaklyHypermeth 7.1397e-03 1.0000e+00 weaklyHypermeth 8.9173e-03 9.9707e-01 weaklyHypermeth 1.7150e-01 1.0000e+00 insignificant 0.0412549 2.1522e-01 lowCoverage 1.0000e+00 lowCoverage 0.925606 0.929095 -0.0039840 6 0.928875 0.924001 0.00487442 6.4284e-01 0.5548346 insignificant 1.0000e+00 1.00000 insignificant 8.8656e-01 0.21569226 insignificant 1.0000e+00 1.00000 insignificant -0.0305958 3.5096e-01 lowCoverage 1.0000e+00 lowCoverage 0.933502 0.8636884 0.069568 6 0.936127 0.871899 0.0642274 2.0783e-05 9.9979e-01 weaklyHypermeth 4.4218e-04 1.0000e+00 weaklyHypermeth 1.7766e-03 9.9931e-01 weaklyHypermeth 4.7073e-02 1.0000e+00 weaklyHypermeth 0.07866977 1.6983e-02 lowCoverage 3.5382e-01 lowCoverage 0.933502 0.929095 0.0036487 6 0.936127 0.924001 0.0121261 4.8381e-01 0.46946616 insignificant 1.0000e+00 1.000000 insignificant 8.2036e-01 0.463762 insignificant 1.0000e+00 1 insignificant 0.0068190 8.0205e-01 lowCoverage 1.00000000 lowCoverage 0.8636884 0.929095 -0.0769811 6 0.8718993 0.924001 -0.0521014 9.8834e-01 8.9798e-04 weaklyHypometh 1.0000e+00 2.8967e-02 weaklyHypometh 9.9844e-01 6.7385e-04 weaklyHypometh 1.0000e+00 4.9134e-02 weaklyHypometh -0.0718507 5.3219e-02 lowCoverage 1.00000000 lowCoverage chr6 38535703 38536703 66702 BTBD9 ENSG00000183826 0.737280 275 7 0.599898 181 6 0.596404 104 6 0.725743 149 6 0.642594 161 7 0.710964 295 7 0.543356 155 7 0.680159 117 7 0.553529 110 4 0.596812 101 6 0.700704 287 7 0.685407 64 3 0.626550 169 5 0.674823 76 4 0.7133575 154 7 0.563174 83 3 0.789526 76 4 0.747471 220 6 0.7232139 157 6 0.632934 235 7 0.382139 52 4 0.668864 87 7 0.684355 189 5 0.634103 66 5 0.8208617 60 7 0.7040680 165 6 0.7095238 103 6 0.623129 45 5 0.659148 184 7 0.578980 161 7 0.6715420 168 7 0.721400 338 7 0.4485597 142 7 0.651392 125 6 0.72320 163 6 0.323611 65 3 0.535357 111 7 0.445143 166 6 0.7736080 298 6 0.736948 247 6 0.714270 192 6 0.7573154 192 7 0.777479 195 6 0.756645 0.7228054 0.548675 0.765511 0.666653 0.723938 0.589947 0.667902 0.601696 0.719928 0.704763 0.610055 0.6535528 0.745833 0.7243632 0.643239 0.6411135 0.750802 0.7395021 0.7266522 0.6434849 0.6646224 0.752303 0.719765 0.8520428 0.7297768 0.7158894 0.7015218 0.714355 0.674670 0.6889516 0.722210 0.4952781 0.605299 0.73443949 5.4770e-01 0.6935290 0.694245 0.782199 0.781665 0.740439 0.7259567 0.788451 4 0.690439 0.714462 -0.02144615 7 0.622065 0.630856 -0.0087911 0.72849152 0.10323766 insignificant 1.00000 1.000000 insignificant 6.8096e-01 0.4190568 insignificant 1.000000 1 insignificant 0.00735199 0.831781 insignificant 1 insignificant 0.690439 0.6282383 0.0571655 6 0.622065 0.503334 0.1187307 9.7352e-04 9.9543e-01 weaklyHypermeth 1.4316e-02 1.0000e+00 weaklyHypermeth 5.7758e-02 9.9132e-01 insignificant 7.0437e-01 1.0000e+00 insignificant 0.1409838 6.5739e-02 insignificant 9.2590e-01 insignificant 0.691358 0.748221 -0.0635683 6 0.685512 0.740797 -0.05528518 9.9761e-01 0.0041866 weaklyHypometh 1.0000e+00 0.48630 insignificant 9.9992e-01 0.00080771 weaklyHypometh 1.0000e+00 0.26924 insignificant -0.0897290 2.3328e-04 weaklyHypometh 2.9160e-02 weaklyHypometh 0.714462 0.6282383 0.079273 6 0.630856 0.503334 0.1275219 1.9690e-03 9.9970e-01 weaklyHypermeth 2.8956e-02 1.0000e+00 weaklyHypermeth 4.3841e-02 9.9934e-01 weaklyHypermeth 5.7686e-01 1.0000e+00 insignificant 0.13363183 8.3633e-02 insignificant 1.0000e+00 insignificant 0.716687 0.748221 -0.0430723 6 0.709060 0.740797 -0.0317374 9.3860e-01 0.10223675 insignificant 1.0000e+00 1.000000 insignificant 9.9862e-01 0.024701 weaklyHypometh 1.0000e+00 1 insignificant -0.0970810 9.8299e-03 weaklyHypometh 0.61436718 insignificant 0.6326797 0.748221 -0.1179430 6 0.5995246 0.740797 -0.1412723 9.9962e-01 1.4256e-03 weaklyHypometh 1.0000e+00 4.3199e-02 weaklyHypometh 9.9998e-01 5.1321e-04 weaklyHypometh 1.0000e+00 4.2767e-02 weaklyHypometh -0.2307129 1.1330e-02 weaklyHypometh 0.36547352 insignificant chr6 41594957 41595957 66896 NCR2 ENSG00000096264 0.678552 302 6 0.688923 322 6 0.597801 267 6 0.656279 189 6 0.626315 162 6 0.556299 370 6 0.739527 240 6 0.661917 237 6 0.537941 246 6 0.703704 182 6 0.655384 232 6 0.522782 139 6 0.577567 228 6 0.562457 62 3 0.5981919 246 6 0.457174 105 6 0.350435 134 5 0.706664 163 6 0.5878990 164 6 0.552753 264 6 0.728815 95 6 0.407524 99 6 0.707528 225 6 0.597619 86 5 0.6495170 94 6 0.6646241 362 6 0.6093215 126 6 0.709702 72 6 0.676168 216 6 0.628604 404 6 0.6529912 354 6 0.798530 333 6 0.5705418 220 6 0.352027 143 6 0.57619 42 2 0.578042 56 5 0.687288 141 6 0.455366 338 6 0.5616415 262 6 0.442850 256 6 0.378846 168 6 0.2046156 273 6 0.500796 175 6 0.675511 0.6458953 0.590813 0.660591 0.636411 0.562033 0.727632 0.656563 0.541822 0.699868 0.760369 0.509152 0.6777683 0.598743 0.5898102 0.524492 0.4725468 0.695544 0.6941154 0.5547406 0.8576688 0.4191207 0.713765 0.713757 0.6406835 0.6745512 0.6255103 0.8172103 0.680228 0.623808 0.7551327 0.804606 0.6000445 0.384676 0.57390034 6.1959e-01 0.8224134 0.513394 0.552080 0.421550 0.365217 0.1968497 0.497192 6 0.636342 0.723439 -0.07869611 6 0.555669 0.600198 -0.0445287 0.98702962 0.00012482 weaklyHypometh 1.00000 0.062409 weaklyHypometh 9.8852e-01 0.0021999 weaklyHypometh 1.000000 1 insignificant -0.05165034 0.147855 insignificant 1 insignificant 0.636342 0.5936170 0.0509198 6 0.555669 0.449786 0.1058829 1.1916e-07 1.9811e-01 weaklyHypermeth 3.2206e-06 1.0000e+00 weaklyHypermeth 1.0268e-02 3.9241e-01 weaklyHypermeth 1.8336e-01 1.0000e+00 insignificant 0.0643523 2.5484e-01 insignificant 1.0000e+00 insignificant 0.637456 0.400353 0.2191995 6 0.629762 0.406101 0.22366101 1.6850e-14 1.0000000 hypermethylated 4.2126e-12 1.00000 hypermethylated 3.2327e-09 1.00000000 hypermethylated 6.4654e-07 1.00000 hypermethylated 0.1831783 3.7022e-02 weaklyHypermeth 1.0000e+00 insignificant 0.723439 0.5936170 0.132889 6 0.600198 0.449786 0.1504116 3.1179e-07 9.3974e-01 weaklyHypermeth 1.1548e-05 1.0000e+00 weaklyHypermeth 1.2990e-03 9.8865e-01 weaklyHypermeth 3.7114e-02 1.0000e+00 weaklyHypermeth 0.11600266 6.5708e-02 insignificant 9.3869e-01 insignificant 0.724909 0.400353 0.2969171 6 0.700231 0.406101 0.2941296 2.2055e-13 1.00000000 hypermethylated 5.5139e-11 1.000000 hypermethylated 4.1165e-08 1.000000 hypermethylated 1.0291e-05 1 hypermethylated 0.2348287 1.4084e-02 weaklyHypermeth 0.69493681 insignificant 0.5948827 0.400353 0.1383948 6 0.5247506 0.406101 0.1186494 8.2761e-04 6.8311e-01 weaklyHypermeth 8.2761e-02 1.0000e+00 weaklyHypermeth 8.2325e-03 8.1870e-01 weaklyHypermeth 8.2325e-01 1.0000e+00 insignificant 0.1188260 1.6436e-01 insignificant 1.00000000 insignificant chr6 41595142 41596142 66897 NCR2 ENSG00000096264 0.678552 302 6 0.688923 322 6 0.597801 267 6 0.656279 189 6 0.626315 162 6 0.556299 370 6 0.739527 240 6 0.661917 237 6 0.537941 246 6 0.703704 182 6 0.655384 232 6 0.522782 139 6 0.577567 228 6 0.562457 62 3 0.5981919 246 6 0.457174 105 6 0.350435 134 5 0.706664 163 6 0.5878990 164 6 0.552753 264 6 0.728815 95 6 0.407524 99 6 0.707528 225 6 0.597619 86 5 0.6495170 94 6 0.6646241 362 6 0.6093215 126 6 0.709702 72 6 0.676168 216 6 0.628604 404 6 0.6529912 354 6 0.798530 333 6 0.5705418 220 6 0.352027 143 6 0.57619 42 2 0.578042 56 5 0.687288 141 6 0.455366 338 6 0.5616415 262 6 0.442850 256 6 0.378846 168 6 0.2046156 273 6 0.500796 175 6 0.675511 0.6458953 0.590813 0.660591 0.636411 0.562033 0.727632 0.656563 0.541822 0.699868 0.760369 0.509152 0.6777683 0.598743 0.5898102 0.524492 0.4725468 0.695544 0.6941154 0.5547406 0.8576688 0.4191207 0.713765 0.713757 0.6406835 0.6745512 0.6255103 0.8172103 0.680228 0.623808 0.7551327 0.804606 0.6000445 0.384676 0.57390034 6.1959e-01 0.8224134 0.513394 0.552080 0.421550 0.365217 0.1968497 0.497192 6 0.636342 0.723439 -0.07869611 6 0.555669 0.600198 -0.0445287 0.98702962 0.00012482 weaklyHypometh 1.00000 0.062409 weaklyHypometh 9.8852e-01 0.0021999 weaklyHypometh 1.000000 1 insignificant -0.05165034 0.147855 insignificant 1 insignificant 0.636342 0.5936170 0.0509198 6 0.555669 0.449786 0.1058829 1.1916e-07 1.9811e-01 weaklyHypermeth 3.2206e-06 1.0000e+00 weaklyHypermeth 1.0268e-02 3.9241e-01 weaklyHypermeth 1.8336e-01 1.0000e+00 insignificant 0.0643523 2.5484e-01 insignificant 1.0000e+00 insignificant 0.637456 0.400353 0.2191995 6 0.629762 0.406101 0.22366101 1.6850e-14 1.0000000 hypermethylated 4.2126e-12 1.00000 hypermethylated 3.2327e-09 1.00000000 hypermethylated 6.4654e-07 1.00000 hypermethylated 0.1831783 3.7022e-02 weaklyHypermeth 1.0000e+00 insignificant 0.723439 0.5936170 0.132889 6 0.600198 0.449786 0.1504116 3.1179e-07 9.3974e-01 weaklyHypermeth 1.1548e-05 1.0000e+00 weaklyHypermeth 1.2990e-03 9.8865e-01 weaklyHypermeth 3.7114e-02 1.0000e+00 weaklyHypermeth 0.11600266 6.5708e-02 insignificant 9.3869e-01 insignificant 0.724909 0.400353 0.2969171 6 0.700231 0.406101 0.2941296 2.2055e-13 1.00000000 hypermethylated 5.5139e-11 1.000000 hypermethylated 4.1165e-08 1.000000 hypermethylated 1.0291e-05 1 hypermethylated 0.2348287 1.4084e-02 weaklyHypermeth 0.69493681 insignificant 0.5948827 0.400353 0.1383948 6 0.5247506 0.406101 0.1186494 8.2761e-04 6.8311e-01 weaklyHypermeth 8.2761e-02 1.0000e+00 weaklyHypermeth 8.2325e-03 8.1870e-01 weaklyHypermeth 8.2325e-01 1.0000e+00 insignificant 0.1188260 1.6436e-01 insignificant 1.00000000 insignificant chr6 41607212 41608212 66899 NCR2 ENSG00000096264 0.558295 212 6 0.552614 167 6 0.472326 101 4 0.569440 166 6 0.555772 72 6 0.574382 225 8 0.427231 89 6 0.633128 140 6 0.646156 101 6 0.476898 107 4 0.732160 275 6 0.361695 51 4 0.568119 123 4 0.451634 50 4 0.7353535 92 4 0.375000 10 0 0.250000 3 0 0.519127 241 6 0.6773007 121 4 0.518113 164 6 0.623932 65 6 0.386667 57 4 0.761905 66 4 0.632179 64 6 0.6098414 112 4 0.5953058 206 6 0.3821538 71 5 0.640306 35 4 0.765700 120 4 0.617772 235 6 0.5930548 224 6 0.660683 143 7 0.0040816 158 6 0.000000 70 4 0.00000 110 4 0.000000 42 4 0.089881 182 6 0.017045 257 6 0.4639583 157 6 0.603442 175 7 0.442920 323 6 0.5135160 258 6 0.545247 201 6 0.743250 0.5116343 0.474771 0.501662 0.649365 0.609295 0.361985 0.655366 0.532285 0.497144 0.621337 0.289108 0.6413258 0.510332 0.6653846 0.150307 0.3060644 0.548874 0.5750968 0.6185808 0.5592209 0.5240326 0.885897 0.677564 0.5112707 0.6037048 0.5212167 0.6935096 0.662637 0.569732 0.5747342 0.787305 0.0027473 0.000000 0.00000000 0.0000e+00 0.0262821 0.053759 0.599199 0.578775 0.510637 0.6384528 0.570062 2 0.561355 0.597849 -0.02521089 6 0.536852 0.525288 0.0115643 0.64572624 0.06615852 insignificant 1.00000 1.000000 insignificant 8.9903e-01 0.2546976 insignificant 1.000000 1 insignificant -0.07305429 0.108904 lowCoverage 1 lowCoverage 0.577711 0.0122100 0.5619338 6 0.578858 0.045136 0.5337220 3.0837e-42 1.0000e+00 hypermethylated 1.0279e-39 1.0000e+00 hypermethylated 3.0843e-12 1.0000e+00 hypermethylated 1.0281e-09 1.0000e+00 hypermethylated 0.5142359 1.3769e-14 lowCoverage 4.5898e-12 lowCoverage 0.560976 0.453237 0.0682165 4 0.500597 0.437874 0.06272254 2.5844e-02 0.5789178 lowCoverage 6.0102e-01 1.00000 lowCoverage 2.4612e-01 0.31412406 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0189205 6.4316e-01 lowCoverage 1.0000e+00 lowCoverage 0.596390 0.0122100 0.581418 6 0.464241 0.045136 0.4191047 2.0856e-32 9.9994e-01 hypermethylated 6.9520e-30 1.0000e+00 hypermethylated 1.3799e-11 1.0000e+00 hypermethylated 6.8994e-09 1.0000e+00 hypermethylated 0.58729023 1.7905e-10 hypermethylated 5.9684e-08 hypermethylated 0.601738 0.453729 0.1094263 4 0.573848 0.494087 0.0797613 7.2345e-03 0.98327992 lowCoverage 2.0701e-01 1.000000 lowCoverage 6.5404e-02 0.992551 lowCoverage 1.0000e+00 1 lowCoverage 0.0919748 5.9092e-02 insignificant 1.00000000 insignificant 0.0110837 0.466387 -0.4519725 4 0.0104128 0.440348 -0.4299352 1.0000e+00 4.0885e-20 lowCoverage 1.0000e+00 2.0442e-17 lowCoverage 1.0000e+00 3.9496e-08 lowCoverage 1.0000e+00 1.9748e-05 lowCoverage -0.4953154 4.8451e-06 hypomethylated 0.00136703 hypomethylated chr6 41755311 41756311 66909 ENSG00000220573 0.931250 81 7 0.963757 111 7 0.953571 79 7 0.920599 89 7 1.000000 20 0 0.928776 217 7 0.867347 58 7 0.929708 95 7 0.825710 73 7 0.935036 116 7 0.958852 113 7 1.000000 44 6 0.917098 115 7 0.839286 43 6 0.8469048 77 7 0.964286 14 1 0.859184 18 2 0.954747 61 6 0.9555556 95 7 0.942818 136 7 0.884454 36 2 0.873706 51 2 0.939791 65 7 0.941919 21 2 0.9558824 39 2 0.9200598 166 7 0.8956710 60 7 0.842857 34 6 0.971140 68 2 0.958565 166 7 0.9269025 165 7 0.868421 180 7 0.8509666 129 7 0.791894 72 2 1.00000 14 1 0.854592 48 7 0.866605 38 3 0.897467 126 7 0.8095238 33 6 0.947090 64 2 0.831933 33 2 0.9392857 43 7 0.991071 61 7 0.900828 0.9235844 0.930723 0.866725 1.000000 0.889518 0.720310 0.884496 0.817259 0.933462 0.913242 1.000000 0.8779166 0.828803 0.8202811 0.924699 0.7934596 0.937290 0.9317269 0.9228662 0.8768604 0.8702637 0.938458 0.890764 0.9069809 0.8742846 0.8583425 0.8084337 0.939151 0.950973 0.8772042 0.836255 0.8062550 0.738932 NA 7.2612e-01 0.8669379 0.923924 0.680321 0.964748 0.760099 0.9201807 0.981175 0 0.899094 0.892483 -0.00067591 7 0.924077 0.915724 0.0083530 0.08953453 0.75288375 insignificant 1.00000 1.000000 insignificant 4.6594e-01 0.7638231 insignificant 1.000000 1 insignificant 0.00977671 0.557887 lowCoverage 1 lowCoverage 0.899094 0.8501171 0.0404659 7 0.924077 0.870877 0.0531997 1.1111e-03 9.7769e-01 weaklyHypermeth 1.5873e-02 1.0000e+00 weaklyHypermeth 1.1666e-02 9.9336e-01 weaklyHypermeth 2.0114e-01 1.0000e+00 insignificant 0.0478035 1.6342e-01 lowCoverage 1.0000e+00 lowCoverage 0.899094 0.918803 -0.0247302 2 0.924077 0.935036 -0.01095969 7.1652e-01 0.1596638 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.1600e-01 0.33768033 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0209434 5.9664e-01 lowCoverage 1.0000e+00 lowCoverage 0.892483 0.8501171 0.042615 7 0.915724 0.870877 0.0448467 2.7796e-02 9.7935e-01 weaklyHypermeth 3.0884e-01 1.0000e+00 insignificant 5.2055e-02 9.9417e-01 insignificant 6.7603e-01 1.0000e+00 insignificant 0.03802677 2.5669e-01 lowCoverage 1.0000e+00 lowCoverage 0.892483 0.918803 -0.0250860 2 0.915724 0.935036 -0.0193127 7.7445e-01 0.12702215 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.2016e-01 0.228527 lowCoverage 1.0000e+00 1 lowCoverage 0.0111667 7.7605e-01 lowCoverage 1.00000000 lowCoverage 0.8501171 0.918803 -0.0731831 2 0.8708770 0.935036 -0.0641594 9.8016e-01 2.1628e-02 lowCoverage 1.0000e+00 3.4330e-01 lowCoverage 9.7608e-01 5.2288e-02 lowCoverage 1.0000e+00 9.7968e-01 lowCoverage -0.0268600 5.6848e-01 lowCoverage 1.00000000 lowCoverage chr6 41924645 41925645 66921 ENSG00000206977 0.615137 65 6 0.388371 70 6 0.536364 34 5 0.527145 60 6 0.545042 47 5 0.563342 67 6 0.606481 51 5 0.434848 43 3 0.301020 37 4 0.536111 25 2 0.649624 81 6 0.388889 34 4 0.518759 55 7 0.523545 45 6 0.6000000 29 5 0.611111 17 0 0.289286 31 4 0.554630 43 3 0.6033670 57 6 0.611111 34 2 0.611111 16 1 0.500000 3 0 0.502137 39 5 0.536111 25 2 0.4972222 27 1 0.6436811 83 6 0.7176871 22 2 0.652778 19 0 0.472222 50 6 0.562500 65 7 0.4976190 40 2 0.638322 62 6 0.4861111 55 6 0.653846 27 2 0.54497 59 6 0.250000 8 0 0.558380 46 7 0.537582 43 2 0.4868552 66 6 0.544444 72 6 0.548514 81 6 0.6071429 40 5 0.625000 39 2 0.638053 0.4186972 0.558042 0.560174 0.488067 0.589938 0.617521 0.471329 0.381868 0.556410 0.618623 0.435897 0.4646465 0.544811 0.6307692 0.615385 0.4189536 0.584615 0.6261849 0.6282051 0.6153846 0.4683372 0.528600 0.571795 0.5153846 0.6610568 0.6959707 0.6538462 0.512821 0.524038 0.4538462 0.606227 0.4294872 0.674556 0.54578755 3.0769e-01 0.5647020 0.489704 0.523924 0.579487 0.580496 0.6373626 0.634615 0 0.568649 0.651885 -0.02553102 2 0.573436 0.610189 -0.0367527 0.97396536 0.26009956 lowCoverage 1.00000 1.000000 lowCoverage 9.6857e-01 0.2657242 lowCoverage 1.000000 1 lowCoverage -0.04907334 0.149009 lowCoverage 1 lowCoverage 0.568649 0.6260504 0.0442495 2 0.573436 0.533039 0.0403971 1.3234e-01 9.4833e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.6427e-01 9.5822e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0150604 8.1055e-01 lowCoverage 1.0000e+00 lowCoverage 0.565502 0.661074 -0.0312579 6 0.520861 0.547308 -0.02644715 8.6777e-01 0.3015952 insignificant 1.0000e+00 1.00000 insignificant 9.2991e-01 0.15053210 insignificant 1.0000e+00 1.00000 insignificant -0.0421821 2.3860e-01 lowCoverage 1.0000e+00 lowCoverage 0.651885 0.6260504 0.073811 2 0.610189 0.533039 0.0771498 1.7766e-02 9.8927e-01 lowCoverage 2.1665e-01 1.0000e+00 lowCoverage 1.8596e-01 9.9410e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.06413371 3.2415e-01 lowCoverage 1.0000e+00 lowCoverage 0.636574 0.661074 -0.0109301 2 0.545220 0.547308 -0.0020875 7.2163e-01 0.66242704 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.0656e-01 0.415189 lowCoverage 1.0000e+00 1 lowCoverage 0.0068913 8.4244e-01 lowCoverage 1.00000000 lowCoverage 0.6217391 0.661074 -0.0850147 2 0.4968789 0.547308 -0.0504290 9.8607e-01 2.0496e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9725e-01 3.0511e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0572424 3.7932e-01 lowCoverage 1.00000000 lowCoverage chr6 42114940 42115940 66936 ENSG00000206875 0.906987 292 5 0.845585 288 5 0.715628 104 5 0.953187 247 5 0.861000 85 5 0.923475 330 5 0.883958 124 5 0.933562 121 5 0.868070 74 5 0.861429 52 5 0.928686 174 5 0.916667 38 3 0.762500 37 2 0.895556 38 2 0.8869464 95 5 0.866667 49 5 0.000000 6 1 0.738955 245 5 0.9347985 184 5 0.909077 247 5 0.933333 34 2 0.756944 32 2 0.870952 56 5 0.839243 96 5 0.9700000 51 5 0.8892473 207 5 0.7951389 52 3 0.961538 48 2 0.839786 173 5 0.911666 256 5 0.9260096 248 5 0.919552 303 5 0.7115344 191 5 0.462782 74 5 1.00000 151 4 0.937931 99 4 0.798437 191 5 0.730771 280 5 0.8503619 312 5 0.891842 196 5 0.855652 260 5 0.9323308 72 5 0.831780 206 4 0.857634 0.8162226 0.794523 0.941804 0.805856 0.917436 0.823087 0.908941 0.765729 0.792417 0.910323 0.865868 0.8642979 0.822755 0.8441821 0.785388 NA 0.843061 0.8983642 0.8967657 0.8926941 0.7548992 0.887981 0.800722 0.9938356 0.8730720 0.5789336 0.9380927 0.823968 0.903100 0.9011675 0.914135 0.6397007 0.624903 0.98518745 8.4908e-01 0.7742940 0.845069 0.807193 0.865913 0.813281 0.8824287 0.741935 2 0.893993 0.886889 -0.00335604 5 0.746040 0.906344 -0.1603039 0.13971875 0.72546478 insignificant 1.00000 1.000000 insignificant 6.9343e-01 0.2749564 insignificant 1.000000 1 insignificant -0.05481436 0.281747 lowCoverage 1 lowCoverage 0.894625 0.7890467 0.1148754 5 0.895248 0.749708 0.1455393 4.8749e-06 9.9710e-01 weaklyHypermeth 1.0372e-04 1.0000e+00 weaklyHypermeth 2.0911e-02 9.9110e-01 weaklyHypermeth 3.2170e-01 1.0000e+00 insignificant 0.0560608 5.5049e-01 lowCoverage 1.0000e+00 lowCoverage 0.894625 0.922562 0.0021028 5 0.895248 0.872119 0.02312915 2.7991e-01 0.5863070 insignificant 1.0000e+00 1.00000 insignificant 2.0224e-01 0.74570844 insignificant 1.0000e+00 1.00000 insignificant -0.0427566 3.9563e-01 lowCoverage 1.0000e+00 lowCoverage 0.886744 0.7890467 0.100666 5 0.887612 0.749708 0.1379040 1.4099e-03 9.9826e-01 weaklyHypermeth 2.2380e-02 1.0000e+00 weaklyHypermeth 6.1933e-02 9.9799e-01 insignificant 7.7417e-01 1.0000e+00 insignificant 0.11087515 2.1839e-01 lowCoverage 1.0000e+00 lowCoverage 0.886744 0.922562 0.0025518 5 0.887612 0.872119 0.0154938 1.0753e-01 0.40617576 insignificant 1.0000e+00 1.000000 insignificant 8.4609e-02 0.881317 insignificant 1.0000e+00 1 insignificant 0.0120578 6.5218e-01 lowCoverage 1.00000000 lowCoverage 0.7890467 0.922562 -0.1149890 5 0.7497084 0.872119 -0.1224102 8.8266e-01 3.0351e-02 weaklyHypometh 1.0000e+00 4.6693e-01 insignificant 9.2525e-01 2.0136e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0988174 2.6531e-01 lowCoverage 1.00000000 lowCoverage chr6 43176001 43177001 66971 PTK7 ENSG00000112655 0.721922 154 8 0.710017 94 3 0.617868 75 3 0.801202 111 8 NA 0 0 0.743772 165 8 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.425720 333 3 0.548022 107 8 0.7388889 52 5 0.826308 118 8 NA 0 0 NA 0 0 0.679601 93 6 NA 0 0 NA 0 0 0.7405696 170 8 NA 0 0 NA 0 0 NA 0 0 0.755937 188 8 0.7352386 170 8 0.753253 171 8 0.6382433 91 3 NA 0 0 0.80535 115 6 0.551190 23 3 NA 0 0 0.689286 126 8 0.7033425 131 6 0.669622 131 8 0.504798 163 8 0.6838118 135 6 0.569727 127 8 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.614747 0.708333 -0.08641947 5 0.659238 0.740215 -0.0809764 0.79911962 0.05883419 insignificant 1.00000 1.000000 insignificant 4.0585e-01 0.7812204 insignificant 1.000000 1 insignificant -0.05139532 0.281628 lowCoverage 1 lowCoverage 0.614747 0.6412429 0.0061434 2 0.659238 0.696479 -0.0372404 1.9701e-01 6.5695e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3759e-02 9.9129e-01 lowCoverage 4.6887e-01 1.0000e+00 lowCoverage 0.0105060 8.8192e-01 lowCoverage 1.0000e+00 lowCoverage 0.613730 0.674927 -0.0676478 5 0.527391 0.546708 -0.01931733 5.0363e-01 0.2744082 insignificant 1.0000e+00 1.00000 insignificant 5.6092e-01 0.81160245 insignificant 1.0000e+00 1.00000 insignificant 0.0552641 3.5533e-01 lowCoverage 1.0000e+00 lowCoverage 0.708333 0.6412429 0.055208 3 0.740215 0.696479 0.0437360 3.3974e-03 9.3676e-01 lowCoverage 4.7851e-02 1.0000e+00 lowCoverage 1.9834e-02 9.7511e-01 lowCoverage 3.0052e-01 1.0000e+00 lowCoverage 0.06190128 3.3225e-01 lowCoverage 1.0000e+00 lowCoverage 0.708333 0.678886 0.0320506 8 0.740215 0.683385 0.0568298 9.1379e-02 0.37371514 insignificant 1.0000e+00 1.000000 insignificant 2.9468e-01 0.394931 insignificant 1.0000e+00 1 insignificant 0.1066594 4.6252e-02 lowCoverage 1.00000000 lowCoverage 0.6422535 0.677892 -0.0381901 3 0.7302031 0.607453 0.1227500 4.3333e-01 9.9753e-05 lowCoverage 1.0000e+00 5.5419e-03 lowCoverage 6.3854e-01 2.3263e-02 lowCoverage 1.0000e+00 5.7289e-01 lowCoverage 0.0447581 5.2012e-01 lowCoverage 1.00000000 lowCoverage chr6 43793935 43794935 66996 ENSG00000218107 0.961289 229 5 0.739121 142 6 0.820370 105 5 0.863315 296 5 0.786530 118 5 0.797414 331 6 0.809902 113 5 0.857453 116 6 0.638540 113 5 0.906051 123 4 0.886665 225 6 0.842328 89 3 0.676011 209 5 0.867987 59 4 0.8818981 141 4 0.734978 44 4 0.861111 25 4 0.725390 300 5 0.8994553 54 5 0.863630 238 6 0.929853 102 6 0.561260 164 4 0.874828 144 6 0.814510 47 4 0.8906250 75 4 0.9262551 203 6 0.8655684 166 6 0.453277 62 4 0.945902 83 5 0.836789 184 6 0.9321811 164 6 0.936826 366 6 0.7203512 126 6 0.800977 146 6 0.87778 96 5 0.913889 59 4 0.842466 94 6 0.833856 162 6 0.8562563 317 6 0.783066 268 5 0.805306 221 5 0.5840819 284 4 0.826221 318 5 0.937144 0.8134272 0.741420 0.853723 0.842074 0.814625 0.869218 0.851506 0.798885 0.897528 0.839457 0.816609 0.7913905 0.839496 0.8440224 0.690145 0.9019608 0.727339 0.8764706 0.8257295 0.9549020 0.6988751 0.844904 0.781914 0.8933824 0.8787630 0.8690629 0.7957633 0.934956 0.730895 0.9148006 0.918970 0.7732239 0.822541 1.00000000 9.0784e-01 0.8249203 0.808227 0.879657 0.734786 0.742538 0.4887979 0.766795 4 0.831922 0.872159 -0.04210362 5 0.860898 0.837417 0.0234813 0.98928029 0.00834731 weaklyHypometh 1.00000 1.000000 insignificant 9.3030e-01 0.0682342 insignificant 1.000000 1 insignificant -0.00968440 0.846995 lowCoverage 1 lowCoverage 0.831867 0.8155198 -0.0072747 5 0.841026 0.817797 0.0232291 3.0058e-01 4.4670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1275e-01 4.3402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0105810 7.5472e-01 lowCoverage 1.0000e+00 lowCoverage 0.831867 0.735085 0.0938173 5 0.841026 0.805971 0.03505512 2.0552e-03 0.9367021 weaklyHypermeth 7.9048e-02 1.00000 weaklyHypermeth 2.3580e-02 0.94323692 weaklyHypermeth 7.8600e-01 1.00000 insignificant 0.0499855 3.7593e-01 lowCoverage 1.0000e+00 lowCoverage 0.872014 0.8155198 0.043923 6 0.814190 0.817797 -0.0036066 1.2812e-02 7.9441e-01 weaklyHypermeth 1.5818e-01 1.0000e+00 insignificant 3.3160e-01 6.6128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00089659 9.8678e-01 insignificant 1.0000e+00 insignificant 0.872014 0.735085 0.1307480 5 0.814190 0.805971 0.0082194 2.1325e-04 0.98313821 weaklyHypermeth 1.0663e-02 1.000000 weaklyHypermeth 9.8559e-03 0.986901 weaklyHypermeth 4.2852e-01 1 insignificant 0.0596699 3.8838e-01 insignificant 1.00000000 insignificant 0.8155198 0.735085 0.0919711 5 0.8177971 0.805971 0.0118260 4.8522e-02 5.0121e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 6.8194e-02 7.1633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0605665 3.1380e-01 insignificant 1.00000000 insignificant chr6 44727578 44728578 67049 CDC5L ENSG00000096401 0.68641 272 5 0.62009 259 8 0.57784 157 5 0.67534 198 4 0.47969 99 4 0.65709 356 8 0.52795 130 8 0.59049 207 7 0.46879 257 5 0.49810 217 5 0.67238 265 8 0.55542 171 5 0.44199 259 6 0.24149 95 3 0.57224 229 5 0.34850 107 4 0.24345 100 5 0.67795 232 5 0.54964 190 6 0.56347 293 8 0.49982 84 7 0.63314 109 5 0.65384 216 8 0.60352 115 8 0.70899 75 4 0.62154 263 7 0.48205 132 7 0.55134 88 4 0.59046 160 8 0.52649 345 8 0.54301 279 8 0.64103 333 8 0.97875 170 8 0.92481 98 8 0.99123 75 3 0.89286 20 1 0.97759 166 8 0.79058 199 8 0.58668 260 6 0.63177 240 8 0.54934 178 5 0.38344 221 7 0.61801 231 7 0.46515 0.34544 0.34695 0.33953 0.16804 0.48424 0.28772 0.30834 0.25429 0.27869 0.45820 0.28525 0.18175 0.30788 0.33302 0.19133 0.10106 0.38451 0.20405 0.28339 0.31203 0.34849 0.48881 0.36187 0.35228 0.35258 0.24940 0.22427 0.31418 0.27908 0.27735 0.46535 0.95701 0.87147 0.95743 0.69512 0.98254 0.81138 0.39050 0.36900 0.24354 0.14552 0.39748 3 0.33814 0.39609 -0.0143171 6 0.50848 0.52130 -0.01282805 0.87809 0.40518273 insignificant 1 1.00000 insignificant 0.97843 0.274400 insignificant 1 1 insignificant -0.055520 0.13004 insignificant 1 insignificant 0.33814 0.90385 -0.494264 6 0.50848 0.92371 -0.415233 9.9968e-01 7.1448e-30 hypomethylated 1.00000000 7.1448e-27 hypomethylated 0.99999592 1.1225e-09 hypomethylated 1.000000 1.1225e-06 hypomethylated -0.3935517 1.6425e-07 hypomethylated 4.1063e-05 hypomethylated 0.33822 0.37611 -0.003791 6 0.57204 0.56448 0.007555 0.52123 0.64800101 insignificant 1 1.00000 insignificant 0.46566 0.8504521 insignificant 1 1 insignificant -0.02143368 0.701016 insignificant 1 insignificant 0.39609 0.90385 -0.481540 8 0.52130 0.92371 -0.402405 9.7043e-01 1.1324e-21 hypomethylated 1.00000000 1.1324e-18 hypomethylated 0.99964924 1.3438e-07 hypomethylated 1.000000 0.00013438 hypomethylated -0.3380317 6.6090e-06 hypomethylated 0.0016523 hypomethylated 0.39663 0.37611 0.014194 6 0.58647 0.56448 0.021987 0.0591397 0.585131 insignificant 1 1 insignificant 0.080387 0.91143 insignificant 1 1 insignificant 0.0340863 0.514756 insignificant 1 insignificant 0.90371 0.37611 0.4702733 6 0.91417 0.56448 0.349692 3.1269e-12 9.9968e-01 hypermethylated 3.1269e-09 1.000000 hypermethylated 9.7357e-06 0.9999817 hypermethylated 0.0097357 1.00000 hypermethylated 0.372118 0.00019485 hypermethylated 0.097423 hypermethylated chr6 46309497 46310497 67250 ENSG00000203986 0.70111 77 5 0.68991 125 5 0.50889 47 5 0.69031 91 5 0.68000 49 5 0.76127 182 5 0.73173 41 2 0.73714 123 5 0.64000 33 4 0.81333 30 5 0.79950 110 5 0.58000 16 2 0.84206 55 5 0.90000 27 2 0.76905 54 5 0.87500 15 2 0.50000 8 0 0.78479 72 5 0.84514 108 5 0.78119 122 5 0.86667 22 2 0.87500 21 2 0.73667 41 2 0.72051 41 4 0.92857 18 2 0.76861 115 5 0.53646 38 2 0.79464 15 2 0.72006 94 5 0.72468 106 5 0.75475 112 5 0.76407 122 5 0.57631 69 5 0.63781 73 5 0.57462 124 5 0.40000 9 0 0.66062 61 5 0.65199 112 5 0.70385 68 5 0.74556 91 5 0.81345 93 5 0.76000 37 5 0.77013 85 5 0.79953 0.75958 0.67507 0.78546 0.75900 0.84047 0.81772 0.83740 0.78537 0.97561 0.88698 0.67073 0.84587 0.98171 0.73171 0.84648 0.85366 0.87385 0.85775 0.80527 0.71545 0.78659 0.78049 0.85272 0.87805 0.83100 0.73908 0.78845 0.86435 0.72506 0.81412 0.78296 0.66855 0.60440 0.68437 0.42683 0.77826 0.78226 0.84381 0.86897 0.86949 0.91341 0.78340 2 0.76101 0.76779 -0.0010754 5 0.74238 0.75099 -0.00860300 0.60754 0.48231352 insignificant 1 1.00000 insignificant 0.51612 0.430707 insignificant 1 1 insignificant -0.034369 0.37390 lowCoverage 1 lowCoverage 0.76101 0.62500 0.123430 5 0.74238 0.61680 0.125588 9.1983e-06 1.0000e+00 weaklyHypermeth 0.00076653 1.0000e+00 weaklyHypermeth 0.00041745 9.9990e-01 weaklyHypermeth 0.046384 1.0000e+00 weaklyHypermeth 0.1479644 1.1155e-02 lowCoverage 1.0000e+00 lowCoverage 0.76101 0.77005 -0.021728 5 0.74238 0.76214 -0.019759 0.88149 0.26560118 insignificant 1 1.00000 insignificant 0.81719 0.3344335 insignificant 1 1 insignificant -0.02707407 0.386255 lowCoverage 1 lowCoverage 0.76779 0.62500 0.124750 5 0.75099 0.61680 0.134191 4.8829e-06 1.0000e+00 weaklyHypermeth 0.00054255 1.0000e+00 weaklyHypermeth 0.00077463 9.9996e-01 weaklyHypermeth 0.077463 1.00000000 weaklyHypermeth 0.1823330 3.7848e-03 lowCoverage 0.6144954 lowCoverage 0.76779 0.77005 -0.020792 5 0.75099 0.76214 -0.011156 0.5010397 0.238655 insignificant 1 1 insignificant 0.400574 0.18244 insignificant 1 1 insignificant 0.0072946 0.831872 lowCoverage 1 lowCoverage 0.62500 0.77005 -0.1455031 5 0.61680 0.76214 -0.145348 9.9999e-01 5.0275e-05 weaklyHypometh 1.0000e+00 0.010055 weaklyHypometh 9.9995e-01 0.0009056 weaklyHypometh 1.0000000 0.14839 insignificant -0.175038 0.00527836 lowCoverage 0.808894 lowCoverage chr6 47976722 47977722 67291 ENSG00000178729 0.86778 189 6 0.70318 271 6 0.69641 127 5 0.76220 140 5 0.78217 249 5 0.84709 148 6 0.74115 148 6 0.82990 210 5 0.90007 92 5 0.87814 191 6 0.83213 325 5 0.72295 102 5 0.89582 578 5 0.95099 289 5 0.86435 226 5 0.69729 72 5 0.86200 619 5 0.79795 187 7 0.93175 211 5 0.93547 128 6 0.84511 76 5 0.76006 56 3 0.86862 243 5 0.87981 100 5 0.87788 67 3 0.87600 507 6 0.85420 69 5 0.78013 35 3 0.93201 365 5 0.81735 463 7 0.83008 328 7 0.83356 217 6 0.85242 293 6 0.84958 173 5 0.83509 221 5 0.90000 17 2 0.78996 113 7 0.83950 349 7 0.70837 102 5 0.75017 140 5 0.86235 122 5 0.89525 174 5 0.90375 110 5 0.83904 0.77500 0.73936 0.81239 0.90258 0.78514 0.74243 0.83649 0.82986 0.87661 0.83042 0.71589 0.89968 0.91470 0.85522 0.64195 0.79681 0.82714 0.92914 0.88102 0.73891 0.81030 0.81285 0.84714 0.84259 0.88422 0.87077 0.79417 0.89803 0.85061 0.86200 0.83899 0.76668 0.86055 0.82105 0.81714 0.71918 0.86168 0.77116 0.82211 0.78979 0.84721 0.80893 5 0.84518 0.87767 -0.0250099 5 0.82346 0.85028 -0.02682356 0.92988 0.12387009 insignificant 1 1.00000 insignificant 0.93622 0.241761 insignificant 1 1 insignificant -0.021293 0.35952 insignificant 1 insignificant 0.84518 0.83877 0.011280 5 0.82346 0.83886 -0.015397 3.6243e-01 4.4017e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.68116741 5.7502e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0194873 4.1579e-01 insignificant 1.0000e+00 insignificant 0.84518 0.81019 0.023997 5 0.82346 0.78718 0.036281 0.24291 0.75185927 insignificant 1 1.00000 insignificant 0.67964 0.3223849 insignificant 1 1 insignificant 0.00096256 0.983240 insignificant 1 insignificant 0.87767 0.83877 0.035514 5 0.85028 0.83886 0.011427 9.6144e-02 6.9797e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.36044235 7.4168e-01 insignificant 1.000000 1.00000000 insignificant 0.0018057 9.2856e-01 insignificant 1.0000000 insignificant 0.87767 0.81019 0.048101 5 0.85028 0.78718 0.063105 0.0062398 0.814007 weaklyHypermeth 1 1 insignificant 0.229459 0.73451 insignificant 1 1 insignificant 0.0222556 0.619511 insignificant 1 insignificant 0.83877 0.81019 0.0071554 5 0.83886 0.78718 0.051678 1.7873e-01 5.0245e-01 insignificant 1.0000e+00 1.000000 insignificant 5.0643e-01 0.6963598 insignificant 1.0000000 1.00000 insignificant 0.020450 0.64952131 insignificant 1.000000 insignificant chr6 49641245 49642245 67310 C6orf141 ENSG00000197261 0.92563 703 8 0.78357 368 8 0.64660 84 4 0.96253 499 8 0.86679 79 3 0.94286 473 8 0.78159 117 8 0.81202 235 8 0.95000 87 6 0.97321 52 3 0.91595 366 8 0.77083 28 2 0.98944 120 3 0.90769 47 3 0.78464 122 4 0.63750 26 3 0.00000 1 0 0.88845 723 6 0.96195 269 5 0.91935 483 8 0.92629 57 5 0.96667 39 3 0.90312 168 6 0.87396 56 6 0.92375 228 5 0.96901 453 8 0.94792 81 6 0.67812 26 2 0.87092 306 8 0.95369 629 8 0.97485 698 8 0.95777 389 8 0.92182 290 8 0.89916 256 8 0.92487 453 8 1.00000 21 2 0.80225 143 8 0.87110 674 8 0.92984 659 8 0.98324 459 8 0.97442 615 8 0.93145 523 8 0.91817 458 8 0.95726 0.91645 0.77518 0.95968 0.83119 0.92793 0.81295 0.84504 0.95635 0.95737 0.96200 0.78825 0.98081 0.88140 0.93251 0.85082 NA 0.91756 0.95064 0.95684 0.88365 0.91552 0.91427 0.72978 0.94724 0.97099 0.97814 0.84549 0.90821 0.96354 0.96890 0.97085 0.94803 0.92426 0.83688 1.00000 0.81535 0.91522 0.96629 0.98297 0.95643 0.97238 0.94251 3 0.92052 0.95016 -0.0299595 8 0.79991 0.84170 -0.04178615 0.99996 0.00035401 weaklyHypometh 1 0.35401 insignificant 0.99978 0.023341 weaklyHypometh 1 1 insignificant -0.091141 0.10551 insignificant 1 insignificant 0.92071 0.89113 0.025624 8 0.89990 0.88271 0.017190 5.3875e-02 8.2093e-02 insignificant 1.00000000 1.0000e+00 insignificant 0.92522267 2.9229e-02 inconclusive 1.000000 1.0000e+00 insignificant -0.0821672 1.5390e-01 insignificant 1.0000e+00 insignificant 0.92071 0.96573 -0.045045 8 0.89990 0.95784 -0.057943 0.99983 0.00063936 weaklyHypometh 1 0.31968 insignificant 0.99625 0.0040635 weaklyHypometh 1 1 insignificant -0.12639436 0.020977 weaklyHypometh 1 insignificant 0.95046 0.89113 0.053713 8 0.94691 0.88271 0.064199 6.3902e-04 9.7388e-01 weaklyHypermeth 0.04260159 1.0000e+00 weaklyHypermeth 0.32272067 6.5348e-01 insignificant 1.000000 1.00000000 insignificant 0.0089740 8.0541e-01 insignificant 1.0000000 insignificant 0.95046 0.96573 -0.015921 8 0.94691 0.95784 -0.010934 0.9525441 0.240640 insignificant 1 1 insignificant 0.853447 0.20245 insignificant 1 1 insignificant -0.0352532 0.211405 insignificant 1 insignificant 0.89113 0.96573 -0.0740557 8 0.88271 0.95784 -0.075133 9.5519e-01 9.1559e-03 weaklyHypometh 1.0000e+00 0.610395 insignificant 9.0165e-01 0.3795459 insignificant 1.0000000 1.00000 insignificant -0.044227 0.17983907 insignificant 1.000000 insignificant chr6 52846392 52847392 67677 ENSG00000220024 0.92271 294 5 0.81770 120 5 0.87859 89 5 0.93828 201 5 0.86544 70 5 0.91152 335 5 0.85484 122 5 0.92199 139 5 0.88462 106 5 0.94048 66 5 0.89843 205 5 0.93590 33 4 0.89928 89 4 0.91346 47 4 0.94471 73 4 0.83929 31 1 0.94444 17 3 0.90471 255 5 0.93645 114 5 0.92297 316 5 0.95000 58 4 0.88297 38 3 0.91182 120 5 0.85057 96 5 0.72917 28 2 0.94445 220 5 0.87032 53 5 0.85381 78 5 0.92145 123 5 0.94155 170 5 0.87862 145 5 0.90366 308 5 0.83772 151 5 0.92895 67 3 0.88000 53 2 1.00000 18 1 0.89594 96 5 0.91683 211 5 0.95674 320 5 0.94089 216 5 0.95630 209 5 0.89587 177 5 0.94757 231 5 0.90460 0.81421 0.90260 0.93824 0.88395 0.92146 0.85433 0.91664 0.85679 0.93205 0.90754 0.89812 0.88258 0.89049 0.92572 0.84171 0.94241 0.89679 0.91768 0.91773 0.88717 0.88903 0.90956 0.74369 0.80286 0.94692 0.83825 0.84286 0.92245 0.93823 0.90568 0.90315 0.83851 0.93177 0.80207 0.91612 0.87812 0.84205 0.95066 0.94507 0.96631 0.90485 0.94773 1 0.89971 0.89631 0.0011270 5 0.90418 0.90470 -0.00052673 0.73162 0.66512841 insignificant 1 1.00000 insignificant 0.83263 0.568937 insignificant 1 1 insignificant 0.017258 0.38342 lowCoverage 1 lowCoverage 0.89971 0.88087 0.019578 5 0.90418 0.88622 0.017958 1.9415e-02 3.0678e-01 weaklyHypermeth 0.88251745 1.0000e+00 insignificant 0.62823724 2.7692e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0061173 8.0440e-01 lowCoverage 1.0000e+00 lowCoverage 0.89971 0.93755 -0.042115 5 0.90418 0.94582 -0.041641 0.99977 0.00043606 weaklyHypometh 1 0.31968 insignificant 0.99548 0.0285686 weaklyHypometh 1 1 insignificant -0.03568372 0.031355 lowCoverage 1 lowCoverage 0.89631 0.88087 0.019940 5 0.90470 0.88622 0.018484 3.9459e-01 5.9469e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.75254040 3.6480e-01 insignificant 1.000000 1.00000000 insignificant -0.0233749 4.2524e-01 lowCoverage 1.0000000 lowCoverage 0.89631 0.93755 -0.042291 5 0.90470 0.94582 -0.041114 0.9943570 0.065702 insignificant 1 1 insignificant 0.985668 0.12548 insignificant 1 1 insignificant -0.0529413 0.022214 lowCoverage 1 lowCoverage 0.88087 0.93755 -0.0626885 5 0.88622 0.94582 -0.059598 9.5788e-01 3.1939e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 6.3913e-01 0.4800887 insignificant 1.0000000 1.00000 insignificant -0.029566 0.27284848 lowCoverage 1.000000 lowCoverage chr6 67130681 67131681 68152 ENSG00000221281 0.85867 341 6 0.77934 111 6 0.68273 92 6 0.90341 146 6 0.73942 59 6 0.80618 217 6 0.76352 135 6 0.72993 96 6 0.69783 73 6 0.79077 114 6 0.80319 230 6 0.76349 80 6 0.83196 163 6 NA 0 0 0.82145 116 6 0.76780 102 6 0.69805 96 6 0.86286 143 6 0.85236 77 6 0.83687 215 6 0.85528 45 6 0.73828 87 6 0.80310 151 6 0.83034 100 6 0.82765 95 6 0.77494 125 6 0.90654 88 6 0.87083 42 5 0.81818 65 6 0.81816 155 6 0.75532 140 6 0.77529 328 6 0.66005 130 6 0.66235 122 6 0.79753 138 6 0.84667 87 6 0.75370 78 6 0.78430 166 6 0.90080 272 6 0.91170 373 6 0.86025 295 6 0.84237 335 6 0.89049 477 6 0.85522 0.76762 0.66886 0.91308 0.72183 0.79906 0.75088 0.71062 0.67646 0.77610 0.78958 0.75148 0.82592 NA 0.80145 0.74971 0.67902 0.85250 0.84378 0.82571 0.85134 0.74555 0.79112 0.81579 0.81980 0.76795 0.89165 0.87312 0.80221 0.80667 0.74234 0.76547 0.65538 0.66225 0.82159 0.83088 0.74518 0.78386 0.89273 0.91195 0.85476 0.84304 0.88528 6 0.79547 0.79733 0.0012339 6 0.80455 0.80291 0.0016329 0.65312 0.733770 insignificant 1 1 insignificant 0.98885 0.054229 insignificant 1 1 insignificant -0.025554 0.212280 insignificant 1 insignificant 0.79547 0.74619 0.048984 6 0.80455 0.74410 0.060449 1.9805e-05 0.97780 weaklyHypermeth 0.0022006 1 weaklyHypermeth 0.023924 0.771107 weaklyHypermeth 1 1 insignificant 0.038174 0.296824 insignificant 1 insignificant 0.79547 0.87728 -0.0839251 6 0.80455 0.88184 -0.077291 1.00000 5.0989e-05 weaklyHypometh 1 0.050989 weaklyHypometh 1.00000 2.2543e-06 weaklyHypometh 1 0.0022543 weaklyHypometh -0.0921839 0.00024702 weaklyHypometh 0.082339 weaklyHypometh 0.79733 0.74619 0.0510210 6 0.80291 0.74410 0.058816 0.0034248 0.981634 weaklyHypermeth 0.31135 1 insignificant 0.027018 0.99052 weaklyHypermeth 1 1 insignificant 0.0637283 0.10146 insignificant 1 insignificant 0.79733 0.87728 -0.0826089 6 0.80291 0.88184 -0.078924 0.99998 1.8883e-06 weaklyHypometh 1 0.0018883 weaklyHypometh 0.99923 0.00071788 weaklyHypometh 1 0.71788 insignificant -0.066630 0.0042173 weaklyHypometh 1 insignificant 0.74619 0.87728 -0.132967 6 0.74410 0.88184 -0.1377408 1.00000 1.6768e-05 weaklyHypometh 1 0.0041921 weaklyHypometh 0.99996 0.0015960 weaklyHypometh 1 0.29364 insignificant -0.130358 0.0065456 weaklyHypometh 1 insignificant chr6 74628426 74629426 68469 ENSG00000221434 0.88701 291 6 0.82081 113 6 0.89103 72 6 0.88933 187 6 0.89524 43 6 0.90049 228 6 0.95928 72 6 0.80922 68 5 0.89939 57 6 0.87467 56 6 0.85423 151 6 0.87991 52 6 0.79658 96 6 NA 0 0 0.91370 101 6 0.88177 60 6 0.72727 114 6 0.90233 303 6 0.89701 91 6 0.92602 128 6 0.94000 39 3 0.93992 71 6 0.91769 159 6 0.81540 39 3 0.97222 58 6 0.90556 133 6 0.96914 59 3 0.96182 61 3 0.72075 68 4 0.87387 132 6 0.83587 115 4 0.90757 294 6 0.79800 101 5 0.85707 83 6 0.94850 139 6 0.97096 50 6 0.86667 41 3 0.87948 124 6 0.88309 306 6 0.91963 221 6 0.91418 291 6 0.91636 313 6 0.92661 351 6 0.90373 0.86264 0.83155 0.91032 0.93557 0.90972 0.96609 0.85026 0.88624 0.92073 0.90048 0.89752 0.88619 NA 0.95570 0.89421 0.69257 0.88717 0.90728 0.94594 0.88000 0.92764 0.96827 0.87275 0.98802 0.94633 0.93827 0.94209 0.88121 0.92096 0.85631 0.92309 0.87227 0.90905 0.98291 0.98475 0.88557 0.91856 0.93469 0.94432 0.94985 0.93565 0.95720 3 0.87998 0.90717 -0.0210896 6 0.87619 0.89345 -0.0172600 0.33714 0.075109 insignificant 1 1 insignificant 0.89010 0.035053 weaklyHypometh 1 1 insignificant -0.022688 0.371318 lowCoverage 1 lowCoverage 0.87998 0.91264 -0.024209 6 0.87619 0.88260 -0.006414 4.0198e-01 0.14729 insignificant 1.0000000 1 insignificant 0.748707 0.188756 insignificant 1 1 insignificant -0.012819 0.666924 insignificant 1 insignificant 0.87998 0.91835 -0.0427454 6 0.87619 0.91372 -0.037532 0.99345 1.9947e-02 weaklyHypometh 1 1.000000 insignificant 0.94062 1.9978e-01 insignificant 1 1.0000000 insignificant -0.0380116 0.01470095 weaklyHypometh 1.000000 insignificant 0.90717 0.91264 -0.0040246 6 0.89345 0.88260 0.010846 0.5826132 0.548727 insignificant 1.00000 1 insignificant 0.402804 0.72902 insignificant 1 1 insignificant 0.0098686 0.77472 lowCoverage 1 lowCoverage 0.90717 0.91835 -0.0255503 6 0.89345 0.91372 -0.020272 0.92034 5.0244e-02 insignificant 1 1.0000000 insignificant 0.39510 0.68133500 insignificant 1 1.00000 insignificant -0.015324 0.5136583 lowCoverage 1 lowCoverage 0.91264 0.91835 -0.022980 6 0.88260 0.91372 -0.0311182 0.96362 1.9971e-01 insignificant 1 1.0000000 insignificant 0.64615 0.4759314 insignificant 1 1.00000 insignificant -0.025192 0.3872620 insignificant 1 insignificant chr6 76494817 76495817 68545 ENSG00000200091 0.71781 141 8 0.74854 125 6 0.68655 73 7 0.65710 106 6 0.59222 55 5 0.75131 216 7 0.72718 46 6 0.76814 97 6 0.82222 51 6 0.72254 52 6 0.79561 173 6 0.98214 23 2 0.87822 74 6 0.83333 49 6 0.72225 85 7 0.77381 28 1 1.00000 17 1 0.82383 115 6 0.85142 123 6 0.78380 197 7 0.76587 39 5 0.76574 60 6 0.65474 113 6 0.65696 69 6 0.71392 56 5 0.83622 139 6 0.57493 85 6 0.71296 42 3 0.80628 109 6 0.90300 160 7 0.86933 119 6 0.84989 225 8 0.62763 120 6 0.72333 78 6 0.74786 130 6 0.88889 9 0 0.84692 84 6 0.76324 178 7 0.71180 143 6 0.81980 108 6 0.86452 144 6 0.79121 66 6 0.73004 115 6 0.77111 0.80373 0.58271 0.82770 0.67006 0.82235 0.63782 0.86662 0.81635 0.73489 0.79977 0.97170 0.85891 0.85063 0.73089 0.78092 0.87409 0.80973 0.82197 0.81035 0.78362 0.81363 0.74953 0.71726 0.69427 0.81277 0.69806 0.69830 0.71870 0.83769 0.81696 0.78131 0.67772 0.69686 0.75271 0.86164 0.79805 0.78501 0.77928 0.77306 0.85842 0.75375 0.73182 2 0.79198 0.77878 0.0112185 6 0.75064 0.80860 -0.0579600 0.35316 0.213563 insignificant 1 1 insignificant 0.16144 0.565518 insignificant 1 1 insignificant 0.022747 0.536028 insignificant 1 insignificant 0.79198 0.75459 0.036759 6 0.75064 0.77329 -0.022651 1.7821e-01 0.82065 insignificant 1.0000000 1 insignificant 0.809641 0.742438 insignificant 1 1 insignificant 0.015588 0.730410 insignificant 1 insignificant 0.79198 0.77951 0.0060436 6 0.75064 0.76713 -0.016486 0.55682 4.8758e-01 insignificant 1 1.000000 insignificant 0.54475 7.2739e-01 insignificant 1 1.0000000 insignificant -0.0015726 0.96589452 insignificant 1.000000 insignificant 0.77878 0.75459 0.0255517 6 0.80860 0.77329 0.035309 0.2108839 0.973506 insignificant 1.00000 1 insignificant 0.846404 0.83816 insignificant 1 1 insignificant -0.0071591 0.88297 insignificant 1 insignificant 0.77878 0.77951 -0.0071963 6 0.80860 0.76713 0.041474 0.54029 5.3276e-01 insignificant 1 1.0000000 insignificant 0.62051 0.55581911 insignificant 1 1.00000 insignificant -0.024320 0.5571521 insignificant 1 insignificant 0.75459 0.77951 -0.032482 6 0.77329 0.76713 0.0061641 0.65648 7.9629e-02 insignificant 1 1.0000000 insignificant 0.81693 0.7300609 insignificant 1 1.00000 insignificant -0.017161 0.7248731 insignificant 1 insignificant chr6 82507832 82508832 68716 ENSG00000212336 0.75846 91 6 0.55000 72 6 0.56508 31 5 0.77736 70 6 0.58304 35 5 0.67369 110 6 0.65238 30 4 0.78493 87 6 0.52500 33 2 0.63690 27 2 0.78251 154 6 0.30000 9 0 0.72507 66 6 0.71000 41 5 0.90833 50 6 0.42857 20 0 0.75000 4 0 0.54145 86 4 0.73973 66 6 0.67179 63 6 0.61111 18 1 0.80000 13 1 0.65667 23 2 0.73862 45 6 0.74271 56 1 0.72593 65 6 0.84552 73 6 0.65278 19 1 0.84342 59 6 0.60805 77 6 0.92593 51 6 0.70360 65 6 0.75199 76 6 0.72917 66 5 0.66727 48 5 1.00000 5 0 0.70876 42 2 0.76240 101 6 0.87436 61 5 0.93319 60 5 0.80303 71 5 0.92361 29 1 0.67538 62 5 0.67449 0.51895 0.52505 0.67674 0.57773 0.84052 0.68417 0.78374 0.72157 0.87862 0.77325 0.38739 0.73320 0.66667 0.90850 0.29412 0.73753 0.56320 0.80742 0.67495 0.57516 0.76937 0.80392 0.72082 0.85915 0.72549 0.84603 0.92375 0.77812 0.82545 0.92157 0.69857 0.76499 0.70588 0.76902 0.77845 0.66818 0.72495 0.86425 0.89790 0.81521 0.91993 0.72249 0 0.73421 0.78191 -0.0374287 6 0.60913 0.53830 0.0708292 0.98669 0.279761 insignificant 1 1 insignificant 0.99969 0.110401 insignificant 1 1 insignificant -0.084645 0.057550 lowCoverage 1 lowCoverage 0.73537 0.76036 -0.016835 6 0.61340 0.76301 -0.149614 7.6828e-01 0.46245 insignificant 1.0000000 1 insignificant 0.943069 0.086389 insignificant 1 1 insignificant -0.116717 0.070478 lowCoverage 1 lowCoverage 0.73592 0.86219 -0.0881167 5 0.71255 0.87533 -0.162782 0.99876 9.5227e-03 weaklyHypometh 1 1.000000 insignificant 0.99995 4.5566e-03 weaklyHypometh 1 1.0000000 insignificant -0.1886982 0.01085385 lowCoverage 1.000000 lowCoverage 0.78986 0.75964 0.0235101 6 0.77854 0.72351 0.055029 0.0603630 0.426752 insignificant 1.00000 1 insignificant 0.075970 0.73682 insignificant 1 1 insignificant -0.0320719 0.58163 lowCoverage 1 lowCoverage 0.78750 0.86219 -0.0529284 5 0.74016 0.87533 -0.135172 0.98694 2.2710e-01 insignificant 1 1.0000000 insignificant 0.96492 0.51397964 insignificant 1 1.00000 insignificant -0.104053 0.1030119 lowCoverage 1 lowCoverage 0.75964 0.86022 -0.041801 5 0.72351 0.83377 -0.1102589 0.55930 1.3745e-02 weaklyHypometh 1 1.0000000 insignificant 0.61164 0.0274529 weaklyHypometh 1 1.00000 insignificant -0.071981 0.3151726 lowCoverage 1 lowCoverage chr6 85950014 85951014 68942 ENSG00000220291 0.76613 267 6 0.54700 111 6 0.41442 79 6 0.76162 127 6 0.75508 70 6 0.73277 206 6 0.70109 89 6 0.65003 83 6 0.68991 72 6 0.73504 76 6 0.63292 184 6 0.51111 29 3 0.80794 100 6 0.56818 35 3 0.71565 64 6 0.64318 43 3 0.67037 31 3 0.81444 150 6 0.67937 61 6 0.77844 133 6 0.79563 30 3 0.67691 47 3 0.66026 101 4 0.83264 54 3 0.70833 29 3 0.69981 121 6 0.74737 84 6 0.77778 23 1 0.72366 56 6 0.78658 120 6 0.75837 132 6 0.70578 187 6 0.68651 93 6 0.72636 59 6 0.79926 162 6 0.56760 40 3 0.73929 52 5 0.69507 81 6 0.71895 202 6 0.74796 173 6 0.81485 159 6 0.73888 234 6 0.76681 225 6 0.78652 0.56722 0.66308 0.74350 0.76811 0.73352 0.76445 0.69920 0.71075 0.73720 0.71194 0.81007 0.82915 0.70979 0.75409 0.67901 0.67065 0.79806 0.71803 0.81891 0.74284 0.68346 0.63746 0.83562 0.70857 0.72899 0.75167 0.73410 0.67108 0.78072 0.76065 0.74382 0.70121 0.73917 0.83525 0.67994 0.86151 0.72391 0.78221 0.76239 0.82401 0.77687 0.77388 3 0.74550 0.74085 0.0023569 6 0.54018 0.79292 -0.2527317 0.60421 0.593082 insignificant 1 1 insignificant 0.84192 0.155104 insignificant 1 1 insignificant -0.060693 0.036584 lowCoverage 1 lowCoverage 0.74625 0.76591 -0.026041 6 0.72768 0.68281 0.044875 9.2056e-01 0.22436 insignificant 1.0000000 1 insignificant 0.923581 0.470736 insignificant 1 1 insignificant -0.023613 0.558650 insignificant 1 insignificant 0.74526 0.78852 -0.0422690 6 0.62013 0.77651 -0.156372 0.99994 4.1231e-01 insignificant 1 1.000000 insignificant 0.99989 1.3893e-01 insignificant 1 1.0000000 insignificant -0.0787564 0.01177848 weaklyHypometh 1.000000 insignificant 0.74033 0.76701 -0.0297554 6 0.72389 0.74375 -0.019858 0.3912077 0.074984 insignificant 1.00000 1 insignificant 0.484880 0.27670 insignificant 1 1 insignificant 0.0370803 0.32207 lowCoverage 1 lowCoverage 0.74085 0.78889 -0.0440864 6 0.79292 0.81770 -0.024779 0.97561 7.2791e-02 insignificant 1 1.0000000 insignificant 0.93633 0.23267805 insignificant 1 1.00000 insignificant -0.018063 0.4331806 lowCoverage 1 lowCoverage 0.76749 0.78846 -0.013549 6 0.78035 0.79165 -0.0112979 0.87496 3.9912e-01 insignificant 1 1.0000000 insignificant 0.97804 0.4365879 insignificant 1 1.00000 insignificant -0.055143 0.1618448 insignificant 1 insignificant chr6 99557122 99558122 70296 FBXL4 ENSG00000112234 0.80618 109 5 0.74116 63 5 0.66667 42 5 0.76517 108 5 0.73736 60 5 0.72965 155 5 0.52762 30 5 0.78752 96 5 0.70095 30 5 0.63799 42 5 0.77183 159 5 0.70000 6 0 0.77573 90 5 0.76286 24 2 0.83333 24 2 0.40000 18 0 1.00000 9 0 0.93315 78 5 0.85278 62 5 0.67208 106 5 0.60833 18 1 0.84127 37 5 0.74768 59 5 0.73929 48 5 0.81429 35 5 0.79487 76 5 0.76389 34 4 0.80556 11 0 0.67578 51 5 0.72891 75 5 0.75754 78 5 0.79276 205 5 0.58611 49 5 0.65102 70 5 0.70676 95 5 0.20000 5 0 0.77320 55 5 0.75333 90 5 0.78939 56 5 0.76492 117 5 0.81190 112 5 0.65786 39 5 0.76034 100 5 0.76295 0.68624 0.65394 0.75656 0.75870 0.71831 0.53168 0.70728 0.69881 0.62108 0.77091 0.65972 0.78803 0.76726 0.84838 0.38542 1.00000 0.89752 0.83816 0.68723 0.62558 0.83047 0.75591 0.64749 0.78849 0.79309 0.71181 0.75926 0.64898 0.68669 0.70810 0.75259 0.58353 0.67348 0.70089 0.23611 0.76451 0.75324 0.78798 0.86231 0.81217 0.65933 0.77163 0 0.73130 0.72765 0.0022297 5 0.81018 0.80942 0.00076277 0.85591 0.8656654 insignificant 1 1 insignificant 0.82324 0.865130 insignificant 1 1 insignificant -0.015744 0.65119 lowCoverage 1 lowCoverage 0.73027 0.68132 0.041688 5 0.73425 0.69497 0.039287 1.1602e-01 0.86221 insignificant 1.0000e+00 1 insignificant 0.04924584 0.97994 weaklyHypermeth 1.000000 1 insignificant 0.12836 0.209826 lowCoverage 1 lowCoverage 0.73109 0.79953 -0.060259 5 0.81018 0.71221 0.097973 0.99977 0.173724 insignificant 1 1 insignificant 0.83608 0.41496 insignificant 1 1 insignificant -0.0167804 0.67529 lowCoverage 1 lowCoverage 0.72462 0.68132 0.038731 5 0.73319 0.69497 0.038219 1.5963e-01 0.90924 insignificant 1.0000e+00 1 insignificant 0.1571406 0.93995 insignificant 1.000000 1 insignificant 0.14411 0.1610826 lowCoverage 1.00000 lowCoverage 0.72576 0.79905 -0.061512 5 0.77766 0.66424 0.113411 0.99838 0.14487 insignificant 1 1 insignificant 0.83333 0.27925 insignificant 1 1 insignificant -0.0010367 0.97515 lowCoverage 1 lowCoverage 0.68132 0.80095 -0.10373 5 0.69497 0.79709 -0.10213 0.99738 0.00743766 weaklyHypometh 1 0.821844 insignificant 0.99879 0.0096476 weaklyHypometh 1 1.00000 insignificant -0.14514 0.1622063 lowCoverage 1 lowCoverage chr6 106163436 106164436 70887 PREP ENSG00000085377 0.86117 251 6 0.75551 231 6 0.66378 114 6 0.93104 192 6 0.87956 77 6 0.93121 419 6 0.88889 75 6 0.91183 170 6 0.85007 119 6 0.99206 78 6 0.84988 299 6 0.55833 28 3 0.94283 159 6 0.73865 112 6 0.75475 178 6 0.84737 55 5 0.50000 2 0 0.48068 186 6 0.94842 287 6 0.94869 245 6 0.90336 62 6 0.78505 72 6 0.86489 110 6 0.99248 106 6 0.62186 52 6 0.88284 283 6 0.87454 162 6 0.88823 48 6 0.88196 249 6 0.96314 293 6 0.95387 250 6 0.94089 283 6 0.71296 189 6 0.75556 109 6 0.70833 78 4 0.33333 39 5 0.61901 129 6 0.41455 284 6 0.94247 192 6 0.90216 185 6 0.90278 124 6 0.90897 140 6 0.78781 136 6 0.84536 0.75340 0.66953 0.93900 0.89639 0.92339 0.88737 0.91431 0.83036 0.98869 0.85063 0.59452 0.94274 0.73354 0.77286 0.84912 0.69199 0.48322 0.94498 0.94954 0.89264 0.76504 0.87207 0.98894 0.61718 0.88200 0.88982 0.85816 0.87861 0.96305 0.95347 0.93922 0.76256 0.79583 0.82132 0.44749 0.75585 0.49104 0.94141 0.89024 0.91096 0.91886 0.77193 6 0.85261 0.90895 -0.0553037 6 0.85305 0.90835 -0.05529652 0.99934 0.0064515 weaklyHypometh 1 1 insignificant 0.99156 0.048426 weaklyHypometh 1 1 insignificant -0.067689 0.13826 insignificant 1 insignificant 0.85261 0.61669 0.236777 6 0.85305 0.62976 0.223289 1.0621e-09 0.64397 hypermethylated 3.5404e-07 1 hypermethylated 0.00060292 0.17418 hypermethylated 0.086132 1 hypermethylated 0.22111 0.025521 weaklyHypermeth 1 insignificant 0.85261 0.89318 -0.039870 6 0.85305 0.89726 -0.044209 0.96541 0.079073 insignificant 1 1 insignificant 0.84393 0.12366 insignificant 1 1 insignificant -0.0771034 0.09139 insignificant 1 insignificant 0.90914 0.61594 0.292120 6 0.92144 0.53980 0.381645 1.0935e-09 0.90115 hypermethylated 2.7337e-07 1 hypermethylated 0.0001531 0.41596 hypermethylated 0.038275 1 hypermethylated 0.28880 0.0079823 weaklyHypermeth 0.88693 insignificant 0.90895 0.89318 0.013074 6 0.90835 0.89726 0.011087 0.38193 0.69372 insignificant 1 1 insignificant 0.40616 0.57540 insignificant 1 1 insignificant -0.0094141 0.81131 insignificant 1 insignificant 0.61669 0.89318 -0.27797 6 0.62976 0.89726 -0.26750 0.74575 0.00009381 hypomethylated 1 0.018762 hypomethylated 0.61980 0.0019312 weaklyHypometh 1 0.48279 insignificant -0.29821 0.0072035 weaklyHypometh 1 insignificant chr6 106626890 106627890 70959 ENSG00000200198 0.88563 140 3 0.81233 197 5 0.70356 180 4 0.81606 138 4 0.85182 131 5 0.85508 141 3 0.65173 211 5 0.82540 139 5 0.67176 210 4 0.78090 153 4 0.85318 185 5 0.82882 114 4 0.88603 113 4 0.77778 30 3 0.48967 118 4 0.80809 112 4 0.84027 137 4 0.85710 139 3 0.94383 90 4 0.81467 130 4 0.64637 41 4 0.83231 66 3 0.86429 116 5 0.79960 50 4 0.78214 50 4 0.85425 216 5 0.75863 57 3 0.75417 42 3 0.72757 121 4 0.80905 195 5 0.80839 188 5 0.79394 158 4 0.81182 151 5 0.73827 80 5 0.87179 88 3 0.36169 34 4 0.88057 142 4 0.34566 220 5 0.87019 166 3 0.92950 103 4 0.63948 83 3 0.75373 98 3 0.80826 144 4 0.79058 0.79841 0.73599 0.72456 0.81702 0.86343 0.78567 0.77586 0.75087 0.70371 0.79333 0.79441 0.86433 0.73658 0.73524 0.81185 0.81897 0.79448 0.93296 0.72754 0.74240 0.73866 0.78302 0.71121 0.79714 0.80467 0.58060 0.80047 0.76665 0.79887 0.84699 0.75613 0.87732 0.67301 0.71329 0.49708 0.81537 0.12080 0.75745 0.87893 0.64253 0.72423 0.73309 3 0.78945 0.79446 -0.0043575 4 0.75163 0.83334 -0.08171386 0.77778 0.3498243 lowCoverage 1 1 lowCoverage 0.68693 0.672258 lowCoverage 1 1 lowCoverage 0.011794 0.68152 lowCoverage 1 lowCoverage 0.78945 0.60420 0.184522 4 0.75163 0.69461 0.057017 1.1257e-04 0.99357 lowCoverage 8.6591e-03 1 lowCoverage 0.08143442 0.94654 lowCoverage 1.000000 1 lowCoverage 0.12939 0.264475 lowCoverage 1 lowCoverage 0.78987 0.76263 0.024069 3 0.80195 0.83944 -0.037489 0.41518 0.009907 lowCoverage 1 1 lowCoverage 0.21504 0.20984 lowCoverage 1 1 lowCoverage -0.0025467 0.96447 lowCoverage 1 lowCoverage 0.79446 0.60420 0.195510 5 0.83334 0.69461 0.138730 5.0822e-03 0.99987 weaklyHypermeth 2.9895e-01 1 insignificant 0.2392474 0.96715 insignificant 1.000000 1 insignificant 0.11759 0.3030806 lowCoverage 1.00000 lowCoverage 0.79414 0.76263 0.024211 3 0.80001 0.83944 -0.039432 0.15198 0.27367 lowCoverage 1 1 lowCoverage 0.27507 0.32887 lowCoverage 1 1 lowCoverage -0.0143410 0.79648 lowCoverage 1 lowCoverage 0.60364 0.76263 -0.19072 3 0.63353 0.83944 -0.20591 0.99862 0.01491689 lowCoverage 1 1.000000 lowCoverage 0.98319 0.1370202 lowCoverage 1 1.00000 lowCoverage -0.13193 0.2811919 lowCoverage 1 lowCoverage chr6 107928483 107929483 71062 SOBP ENSG00000112320 0.92205 209 6 0.90833 46 2 0.91964 46 5 0.92579 91 6 0.89425 35 5 0.68822 97 5 0.88750 35 2 0.90957 49 2 0.80303 41 5 0.79048 51 5 0.75520 116 5 0.94147 48 5 0.91718 48 2 NA 0 0 0.90286 51 5 0.88312 44 5 0.68118 73 5 0.85585 119 6 0.88297 70 5 0.79468 89 5 0.89333 14 1 0.75952 29 2 0.89683 91 6 0.58333 9 0 0.96000 35 4 0.95476 76 5 0.83958 31 2 0.88148 46 3 0.90783 61 3 0.92042 70 5 0.91889 72 5 0.80781 131 5 0.79333 47 3 0.78056 69 5 0.81460 85 5 0.79274 37 4 0.97778 21 2 0.69563 58 4 0.96963 209 6 0.95339 180 6 0.91435 171 6 0.93430 154 6 0.92028 165 6 0.92384 0.85935 0.82727 0.90256 0.92245 0.76185 0.75818 0.80562 0.87511 0.91170 0.75700 0.95166 0.91778 NA 0.90067 0.86273 0.82001 0.79009 0.88652 0.82484 0.77072 0.77764 0.76124 0.83667 0.91402 0.93469 0.84648 0.82201 0.88997 0.86499 0.85464 0.87634 0.72819 0.74688 0.70998 0.87410 0.95223 0.82581 0.954993 0.92389 0.82813 0.89267 0.86370 2 0.85862 0.87368 -0.0187249 5 0.86317 0.90174 -0.0385729 0.97143 0.09782 insignificant 1 1 insignificant 0.91323 0.036239 weaklyHypometh 1 1 insignificant -0.0043495 0.90361 lowCoverage 1 lowCoverage 0.85862 0.78549 0.0713492 5 0.86317 0.79093 0.072243 0.0025221 9.9638e-01 weaklyHypermeth 0.13274 1.000000 insignificant 0.118589 0.9636336 insignificant 1 1.00000 insignificant 0.046862 0.298485 lowCoverage 1 lowCoverage 0.85862 0.94198 -0.065561 5 0.86317 0.93918 -0.076009 9.9966e-01 0.0010923 weaklyHypometh 1.0000e+00 0.20908 insignificant 9.9824e-01 0.01749309 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.082425 0.00077852 lowCoverage 0.12167 lowCoverage 0.87368 0.78549 0.0904757 5 0.90174 0.79093 0.110816 0.0012000 0.99996329 weaklyHypermeth 0.07059 1.00000 weaklyHypermeth 0.023708 0.9986036 weaklyHypermeth 1 1 insignificant 0.051211 0.31175 lowCoverage 1 lowCoverage 0.87368 0.94198 -0.037680 5 0.90174 0.93918 -0.037436 9.9724e-01 0.2530213 insignificant 1.0000e+00 1.00000 insignificant 7.1073e-01 0.59762 insignificant 1.00000000 1 insignificant -0.078076 0.0294860 lowCoverage 1.00000 lowCoverage 0.78549 0.94198 -0.129901 5 0.79093 0.93918 -0.148252 1.0000e+00 7.5066e-06 weaklyHypometh 1.0000e+00 0.00093833 weaklyHypometh 9.9996e-01 0.009791 weaklyHypometh 1.00000000 0.89683 insignificant -0.129287 0.01740484 lowCoverage 1.00000 lowCoverage chr6 108038772 108039772 71099 SOBP ENSG00000112320 0.77233 339 5 0.80006 313 5 0.88333 84 5 0.88046 312 5 0.72418 50 5 0.84405 358 5 0.72271 52 5 0.94059 137 5 0.85949 147 5 0.89057 129 5 0.93525 229 5 0.96000 19 2 0.74454 238 5 0.82619 120 5 0.79950 107 5 0.85000 11 0 0.50000 8 0 0.78265 453 5 0.91677 137 5 0.81407 251 5 0.80952 27 3 0.39586 109 5 0.89578 154 5 0.91833 102 5 0.77333 37 5 0.76583 341 5 0.75909 86 5 0.58684 62 3 0.80550 201 5 0.83997 275 5 0.83237 276 5 0.92899 338 5 0.73538 247 5 0.84627 82 5 NA 0 0 0.54286 27 3 0.80379 132 5 0.91607 236 5 0.41889 301 5 0.52634 246 5 0.70337 262 5 0.63721 278 5 0.52488 312 5 0.78452 0.81452 0.87784 0.89364 0.76003 0.85092 0.70310 0.95191 0.85820 0.89675 0.93469 0.96970 0.76788 0.82449 0.81235 0.88636 0.50000 0.75302 0.91424 0.82709 0.83189 0.43020 0.89073 0.93497 0.78788 0.78517 0.74558 0.66069 0.81186 0.85272 0.85034 0.92702 0.76362 0.86482 NA 0.63203 0.84126 0.92760 0.444214 0.64660 0.72948 0.67103 0.66533 3 0.83252 0.83317 0.0018850 5 0.82177 0.81792 0.0038484 0.61128 0.64637 insignificant 1 1 insignificant 0.26674 0.914347 insignificant 1 1 insignificant 0.0463852 0.35813 lowCoverage 1 lowCoverage 0.83252 0.83978 -0.0066185 5 0.82177 0.80526 0.016513 0.0914990 4.0389e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.188012 0.0871276 insignificant 1 1.00000 insignificant 0.053461 0.465086 lowCoverage 1 lowCoverage 0.83257 0.63688 0.203952 5 0.85147 0.49822 0.353253 8.0629e-14 1.0000000 hypermethylated 2.6876e-11 1.00000 hypermethylated 1.4474e-07 1.00000000 hypermethylated 4.8245e-05 1.00000 hypermethylated 0.260201 0.00324718 lowCoverage 0.29520 lowCoverage 0.83317 0.83978 -0.0088265 5 0.81792 0.80526 0.012665 0.5088613 0.21993056 insignificant 1.00000 1.00000 insignificant 0.526088 0.0661657 insignificant 1 1 insignificant 0.007076 0.92908 lowCoverage 1 lowCoverage 0.83317 0.63871 0.197077 5 0.81792 0.59787 0.220055 1.9249e-07 1.0000000 weaklyHypermeth 2.4062e-05 1.00000 weaklyHypermeth 6.9004e-05 1.00000 weaklyHypermeth 0.01614278 1 weaklyHypermeth 0.213816 0.0083277 lowCoverage 0.83277 lowCoverage 0.83978 0.63871 0.208885 5 0.80526 0.59787 0.207390 3.2677e-06 9.9996e-01 hypermethylated 8.1693e-04 1.00000000 hypermethylated 2.0783e-04 0.998849 hypermethylated 0.06927828 1.00000 hypermethylated 0.206740 0.03502205 lowCoverage 1.00000 lowCoverage chr6 109623951 109624951 71218 ENSG00000203800 0.69819 101 5 0.70492 109 5 0.82424 44 4 0.65732 81 5 0.72013 78 5 0.67588 73 3 0.69610 66 5 0.76402 68 3 0.58114 52 5 0.74841 38 4 0.78782 133 5 0.68333 25 2 0.76763 90 5 0.76289 67 4 0.81189 54 5 0.69444 34 3 0.57576 75 3 0.78126 106 5 0.76503 55 5 0.71346 53 5 0.68000 18 2 0.87500 6 0 0.78631 65 5 0.78333 41 4 0.78199 53 3 0.80802 72 3 0.63500 32 3 0.54167 13 0 0.77385 88 5 0.66762 60 4 0.73016 46 3 0.48171 91 3 0.72733 116 5 0.72333 52 5 0.63133 90 3 0.53000 13 1 0.67500 43 4 0.68397 65 3 0.81700 80 5 0.83823 86 5 0.74284 96 4 0.72941 60 3 0.66511 96 5 0.74224 0.66787 0.81848 0.71450 0.77285 0.70335 0.74637 0.79863 0.70725 0.79715 0.78315 0.69363 0.78334 0.88888 0.82096 0.73529 0.64767 0.86031 0.77927 0.79084 0.77059 0.80509 0.72497 0.88627 0.77457 0.82280 0.71029 0.69118 0.79253 0.70938 0.74673 0.77636 0.75694 0.72451 0.71716 0.57941 0.75000 0.75321 0.814773 0.87051 0.77381 0.72318 0.70531 0 0.75250 0.77163 -0.0019804 3 0.61821 0.77910 -0.1608928 0.77152 0.53732 lowCoverage 1 1 lowCoverage 0.70455 0.255049 lowCoverage 1 1 lowCoverage 0.0086394 0.81617 lowCoverage 1 lowCoverage 0.75431 0.75726 0.0234963 5 0.74049 0.70173 0.038756 0.0836269 8.6324e-01 insignificant 1.00000 1.000000 insignificant 0.070576 0.9722580 insignificant 1 1.00000 insignificant 0.058866 0.119158 lowCoverage 1 lowCoverage 0.75431 0.79187 -0.031088 5 0.74049 0.77500 -0.034512 9.2253e-01 0.2768143 insignificant 1.0000e+00 1.00000 insignificant 8.1240e-01 0.58643997 insignificant 1.0000e+00 1.00000 insignificant -0.037823 0.31784489 lowCoverage 1.00000 lowCoverage 0.77138 0.75726 0.0243372 3 0.74074 0.70173 0.039006 0.0238090 0.76889544 lowCoverage 0.91573 1.00000 lowCoverage 0.076315 0.9623628 lowCoverage 1 1 lowCoverage 0.050227 0.28060 lowCoverage 1 lowCoverage 0.77138 0.79187 -0.023046 3 0.74074 0.77500 -0.034262 7.1071e-01 0.3892107 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.8455e-01 0.68714 lowCoverage 1.00000000 1 lowCoverage -0.046463 0.3287592 lowCoverage 1.00000 lowCoverage 0.75726 0.79187 -0.053992 5 0.70173 0.77500 -0.073268 9.7367e-01 7.9430e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8306e-01 0.093980 insignificant 1.00000000 1.00000 insignificant -0.096690 0.05343030 lowCoverage 1.00000 lowCoverage chr6 112100945 112101945 71286 ENSG00000208826 0.74197 287 5 0.78694 119 5 0.62015 111 5 0.57059 114 5 0.92143 39 5 0.74070 180 5 0.78899 80 5 0.85728 79 5 0.84143 60 5 0.87167 54 5 0.81661 161 5 0.91923 60 5 0.52633 121 5 NA 0 0 0.69649 111 5 0.71389 42 5 0.65128 55 5 0.61200 93 5 0.89206 80 5 0.65377 168 5 0.94286 44 3 0.16675 52 5 0.84909 131 5 0.68018 68 5 0.85238 34 5 0.64700 103 5 0.75756 56 5 0.98333 30 2 0.67851 81 5 0.67798 140 5 0.39972 149 5 0.83016 264 5 0.91536 110 5 0.93784 92 5 0.70163 290 5 0.66746 31 3 0.87489 77 5 0.86591 106 5 0.08144 167 5 0.45051 174 5 0.29793 117 5 0.50616 199 5 0.26008 126 5 0.74670 0.79245 0.62778 0.58195 0.92374 0.74180 0.78753 0.85135 0.82775 0.87131 0.81469 0.91533 0.51566 NA 0.68935 0.69596 0.65816 0.62019 0.89377 0.65170 0.94643 0.17251 0.85464 0.66563 0.84474 0.64939 0.73595 0.98047 0.67799 0.67539 0.40308 0.83359 0.91597 0.93708 0.72358 0.68527 0.88064 0.87055 0.075639 0.45528 0.30304 0.51493 0.25794 5 0.72592 0.69618 0.0309173 5 0.72744 0.69690 0.0305385 0.28584 0.93206 insignificant 1 1 insignificant 0.50793 0.775259 insignificant 1 1 insignificant 0.0431083 0.55836 lowCoverage 1 lowCoverage 0.72592 0.85836 -0.1050375 5 0.72744 0.82596 -0.098515 0.9253628 7.3227e-05 weaklyHypometh 1.00000 0.024409 weaklyHypometh 0.991743 0.0009058 weaklyHypometh 1 0.22645 insignificant -0.078613 0.181218 lowCoverage 1 lowCoverage 0.72592 0.32439 0.390012 5 0.72744 0.33911 0.388333 6.2243e-19 1.0000000 hypermethylated 6.2243e-16 1.00000 hypermethylated 1.2854e-11 1.00000000 hypermethylated 1.2854e-08 1.00000 hypermethylated 0.429345 0.00277946 lowCoverage 0.27795 lowCoverage 0.69618 0.85836 -0.1363160 5 0.69690 0.82596 -0.129054 0.9567362 0.00077644 weaklyHypometh 1.00000 0.19411 insignificant 0.980416 0.0045556 weaklyHypometh 1 1 insignificant -0.121721 0.15320 lowCoverage 1 lowCoverage 0.69618 0.32439 0.358856 5 0.69690 0.33911 0.357795 1.9761e-09 1.0000000 hypermethylated 4.9402e-07 1.00000 hypermethylated 7.1406e-07 1.00000 hypermethylated 0.00071406 1 hypermethylated 0.386237 0.0029740 lowCoverage 0.49567 lowCoverage 0.85836 0.32439 0.491127 5 0.82596 0.33911 0.486848 2.8031e-11 1.0000e+00 hypermethylated 1.4015e-08 1.00000000 hypermethylated 2.1935e-07 1.000000 hypermethylated 0.00021935 1.00000 hypermethylated 0.507958 0.00075078 lowCoverage 0.20150 lowCoverage chr6 113130805 113131805 71335 ENSG00000213146 0.81924 264 5 0.52313 120 5 0.52342 86 5 0.75330 161 5 0.78004 74 5 0.84483 179 5 0.66608 89 5 0.77343 101 5 0.74889 74 5 0.64810 113 5 0.76486 141 5 0.73162 67 5 0.62351 89 5 0.83333 12 1 0.72045 110 5 0.85042 45 5 0.50312 82 5 0.75857 157 5 0.44499 125 5 0.82157 269 5 0.73333 28 1 0.76067 60 5 0.74399 113 5 0.92143 53 5 0.70105 90 5 0.75247 91 5 0.88577 60 5 0.86162 48 5 0.67629 89 5 0.56230 100 5 0.64951 118 5 0.65133 249 5 0.73353 82 5 0.72596 134 5 0.75567 104 5 0.83000 28 5 0.77752 54 5 0.84923 112 5 0.87434 322 5 0.86583 237 5 0.78640 277 5 0.79760 232 5 0.86596 232 5 0.79420 0.63295 0.52143 0.89584 0.80881 0.84423 0.68780 0.74814 0.72433 0.66261 0.76058 0.76286 0.64711 NA 0.71527 0.84796 0.51194 0.76308 0.56244 0.82696 0.72714 0.75212 0.72342 0.90860 0.69018 0.71359 0.83853 0.84266 0.69048 0.62541 0.67055 0.66986 0.72235 0.69072 0.71737 0.81646 0.78954 0.83064 0.843090 0.82874 0.77262 0.79717 0.87741 5 0.74088 0.72066 0.0233569 5 0.66516 0.76135 -0.0961916 0.44757 0.74430 insignificant 1 1 insignificant 0.95334 0.232846 insignificant 1 1 insignificant -0.0350015 0.40322 lowCoverage 1 lowCoverage 0.74192 0.73541 0.0093449 5 0.73152 0.77069 -0.039167 0.4904002 4.8413e-02 inconclusive 1.00000 1.000000 insignificant 0.896295 0.0333889 inconclusive 1 1.00000 insignificant -0.072006 0.049993 lowCoverage 1 lowCoverage 0.74088 0.82077 -0.078666 5 0.66516 0.85534 -0.190182 9.9990e-01 0.0014636 weaklyHypometh 1.0000e+00 0.20908 insignificant 1.0000e+00 0.00038224 weaklyHypometh 1.0000e+00 0.19112 insignificant -0.131379 0.00085172 lowCoverage 0.12167 lowCoverage 0.72040 0.73541 -0.0146545 5 0.71362 0.77069 -0.057071 0.7569880 0.04766788 weaklyHypometh 1.00000 1.00000 insignificant 0.867398 0.2813195 insignificant 1 1 insignificant -0.037005 0.33095 lowCoverage 1 lowCoverage 0.72066 0.82077 -0.096129 5 0.76135 0.85534 -0.093990 1.0000e+00 0.0011949 weaklyHypometh 1.0000e+00 0.50817 insignificant 9.9995e-01 0.03901 weaklyHypometh 1.00000000 1 insignificant -0.096377 0.0169774 lowCoverage 1.00000 lowCoverage 0.73541 0.82035 -0.081199 5 0.77069 0.82641 -0.055717 9.0231e-01 3.9076e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.1074e-01 0.163009 insignificant 1.00000000 1.00000 insignificant -0.059372 0.06391321 insignificant 1.00000 insignificant chr6 125836751 125837751 72005 HDDC2 ENSG00000111906 0.885266 316 8 0.760237 287 7 0.823574 220 6 0.77930 123 8 0.86406 97 7 0.637498 576 8 0.764450 161 8 0.741022 181 7 0.774066 178 8 0.757527 159 7 0.72629 270 8 0.817192 149 8 0.779266 245 8 0.83333 12 1 0.834966 214 8 0.792491 82 8 0.733171 126 8 0.76972 166 8 0.89319 273 7 0.8202459 588 8 0.631746 134 6 0.76851 126 8 0.710816 160 8 0.687939 58 5 0.86302 79 5 0.740063 434 8 0.857857 159 7 0.82767 66 5 0.867781 253 7 0.861258 533 8 0.762693 523 8 0.73367 572 8 0.717023 297 6 0.76541 194 8 0.77059 111 8 0.76678 120 8 0.70399 95 5 0.69135 383 8 0.81663 267 8 0.825973 350 8 0.79647 156 8 0.726499 208 8 0.840455 256 8 0.897873 0.769312 0.796689 0.84921 0.83631 0.820485 0.752400 0.793859 0.816969 0.822595 0.82822 0.840078 0.77100 NA 0.861621 0.860320 0.75315 0.84382 0.890816 0.818779 0.70045 0.77588 0.699503 0.759498 0.82467 0.837184 0.781001 0.846005 0.850682 0.859109 0.813898 0.82588 0.721516 0.73519 0.73445 0.73341 0.66076 0.81238 0.834289 0.789265 0.80250 0.741230 0.817721 5 0.813927 0.812399 -0.00426189 8 0.683048 0.726159 -0.04311101 0.89601 0.514654 insignificant 1 1 insignificant 0.81575 0.6780937 insignificant 1 1 insignificant 0.01325865 0.622334 insignificant 1 insignificant 0.814538 0.7483333 0.061111 8 0.742243 0.6851759 0.057068 3.3555e-04 0.89315 weaklyHypermeth 0.02097160 1 weaklyHypermeth 3.3993e-03 0.94131 weaklyHypermeth 0.2124578 1 insignificant 0.053485 1.7021e-02 weaklyHypermeth 1.0000000 insignificant 0.814253 0.807599 0.016411 8 0.718019 0.829650 -0.1116308 0.297085 0.42176830 insignificant 1 1.00000 insignificant 0.31831 0.60222777 insignificant 1 1.000000 insignificant -0.011863 0.63531821 insignificant 1.000000 insignificant 0.812540 0.7483333 0.066321 8 0.776416 0.6851759 0.091240 4.6646e-03 0.93969 weaklyHypermeth 2.5914e-01 1 insignificant 0.01838780 0.97927 weaklyHypermeth 1.000000 1 insignificant 0.040226 0.1570450 insignificant 1.00000 insignificant 0.812661 0.807599 0.019927 8 0.798775 0.829650 -0.030875 0.53213 0.9062300 insignificant 1 1 insignificant 0.61252 0.943613 insignificant 1 1 insignificant -0.025121 0.4225307 insignificant 1.00000 insignificant 0.7483333 0.807287 -0.040993 8 0.6851759 0.810722 -0.125546 0.36016 1.6749e-01 insignificant 1 1.0000e+00 insignificant 0.65994 6.5862e-02 insignificant 1 1.0000000 insignificant -0.065348 0.0308590 weaklyHypometh 1.0000 insignificant chr6 129451813 129452813 72376 ENSG00000220884 0.869952 150 6 0.801301 109 7 0.619444 30 3 0.92709 117 6 0.76949 290 6 0.697222 36 4 0.802311 137 6 0.754497 67 6 0.798115 45 4 0.868790 74 6 0.79803 82 4 0.675000 30 3 0.743399 309 6 0.76468 176 6 0.875000 73 5 0.680556 24 1 0.500000 2 0 0.79642 156 7 0.81688 112 6 1.0000000 7 0 0.931624 53 3 0.93124 40 3 0.839783 168 6 0.832960 63 6 0.93331 129 3 0.723946 118 6 0.703199 63 6 0.76458 45 4 0.744195 173 6 0.895243 124 6 0.846063 125 6 1.00000 14 0 0.851617 161 6 0.79710 69 3 0.67119 189 8 0.91667 26 3 0.67063 34 3 0.69996 128 7 0.94240 93 6 0.828463 66 3 0.94347 128 6 0.752182 194 6 0.723994 73 3 0.892914 0.863670 0.738194 0.93460 0.85823 0.917245 0.774977 0.986111 0.802910 0.899488 0.89946 0.893750 0.88285 0.89540 0.943056 0.598380 NA 0.91702 0.910923 1.000000 0.96083 0.85956 0.940109 0.926879 0.89818 0.912296 0.699968 0.658333 0.875294 0.937261 0.945567 1.00000 0.887196 0.79836 0.85250 0.86632 0.67554 0.84689 0.957135 0.940750 0.91760 0.899081 0.957868 1 0.858835 0.885202 -0.01892862 6 0.802797 0.790677 0.01212010 0.74605 0.193057 insignificant 1 1 insignificant 0.94380 0.0341619 weaklyHypometh 1 1 insignificant -0.06760321 0.079875 lowCoverage 1 lowCoverage 0.858835 0.8121911 0.056654 4 0.802797 0.7043232 0.098474 3.6105e-03 0.99984 lowCoverage 0.18568302 1 lowCoverage 6.3338e-02 0.99107 lowCoverage 1.0000000 1 lowCoverage 0.010047 8.4195e-01 lowCoverage 1.0000000 lowCoverage 0.858835 0.893502 -0.036193 6 0.802797 0.811708 -0.0089105 0.946184 0.14271004 insignificant 1 1.00000 insignificant 0.99798 0.02733997 weaklyHypometh 1 1.000000 insignificant -0.060193 0.29022402 lowCoverage 1.000000 lowCoverage 0.885202 0.8121911 0.073596 4 0.790677 0.7043232 0.086354 6.9005e-04 0.99944 lowCoverage 4.6003e-02 1 lowCoverage 0.00856415 0.99872 lowCoverage 0.535259 1 lowCoverage 0.077650 0.1566112 lowCoverage 1.00000 lowCoverage 0.885202 0.893502 -0.016992 6 0.790677 0.811708 -0.021031 0.88998 0.3194104 insignificant 1 1 insignificant 0.95565 0.340424 insignificant 1 1 insignificant 0.007410 0.8941765 lowCoverage 1.00000 lowCoverage 0.8121911 0.893502 -0.085575 4 0.7043232 0.811708 -0.107385 0.99974 8.9058e-04 lowCoverage 1 6.8506e-02 lowCoverage 0.99989 2.6370e-03 lowCoverage 1 0.2637006 lowCoverage -0.070240 0.2911889 lowCoverage 1.0000 lowCoverage chr6 132722280 132723280 72526 ENSG00000220956 0.731223 278 11 0.685296 162 10 0.664403 149 11 0.80066 186 11 0.48587 87 8 0.787648 276 10 0.699839 111 11 0.631377 140 10 0.687099 131 10 0.752533 110 10 0.71965 269 11 0.781818 47 5 0.706808 129 10 0.81481 60 6 0.667779 129 10 0.575821 69 6 0.471038 70 5 0.77022 202 11 0.79184 150 11 0.7363190 264 11 0.668301 67 7 0.81876 56 4 0.837385 144 11 0.733956 75 7 0.74538 70 10 0.746393 216 10 0.669086 126 10 0.64885 48 5 0.688456 158 10 0.747776 249 11 0.736108 223 10 0.76311 260 11 0.706697 157 9 0.59922 130 10 0.65741 199 11 0.77335 55 5 0.57716 80 4 0.66701 214 10 0.77876 248 7 0.790998 284 11 0.81945 212 11 0.788369 237 11 0.810520 245 11 0.742479 0.691442 0.686740 0.81930 0.59701 0.771848 0.776490 0.625648 0.676895 0.764706 0.76907 0.784750 0.70712 0.76674 0.744295 0.609879 0.62988 0.78025 0.780881 0.760306 0.73285 0.81299 0.818198 0.715291 0.74390 0.758873 0.761985 0.714606 0.733471 0.772292 0.761718 0.78403 0.680373 0.63738 0.69676 0.74056 0.58080 0.70928 0.811564 0.789513 0.82075 0.828448 0.830863 4 0.739649 0.780603 -0.03165530 10 0.743455 0.728497 0.01495745 0.96125 0.012907 weaklyHypometh 1 1 insignificant 0.97865 0.0075147 weaklyHypometh 1 1 insignificant -0.03552679 0.203836 insignificant 1 insignificant 0.739649 0.6886228 0.058713 10 0.743455 0.6773728 0.066082 4.3510e-03 0.99996 weaklyHypermeth 0.19777309 1 insignificant 6.0211e-02 0.99910 insignificant 1.0000000 1 insignificant 0.034628 3.6074e-01 insignificant 1.0000000 insignificant 0.739390 0.795269 -0.073492 11 0.720132 0.797940 -0.0778079 0.999991 0.00074905 weaklyHypometh 1 0.37452 insignificant 0.99998 0.00011350 weaklyHypometh 1 0.056749 weaklyHypometh -0.099518 0.00025022 weaklyHypometh 0.041703 weaklyHypometh 0.780603 0.6886228 0.091956 10 0.728497 0.6773728 0.051124 1.6587e-08 0.99998 weaklyHypermeth 1.6587e-06 1 weaklyHypermeth 0.00094897 0.99967 weaklyHypermeth 0.086270 1 weaklyHypermeth 0.070155 0.0689188 insignificant 1.00000 insignificant 0.780935 0.795269 -0.041828 10 0.749270 0.797940 -0.048671 0.99527 0.0366771 weaklyHypometh 1 1 insignificant 0.99070 0.035862 weaklyHypometh 1 1 insignificant -0.063991 0.0035449 weaklyHypometh 0.44312 insignificant 0.6882494 0.795269 -0.132317 10 0.6480431 0.797940 -0.149897 1.00000 5.1435e-10 weaklyHypometh 1 1.7145e-07 weaklyHypometh 1.00000 7.5357e-06 weaklyHypometh 1 0.0026820 weaklyHypometh -0.134146 0.0049995 weaklyHypometh 0.9999 insignificant chr6 134237783 134238783 72675 ENSG00000218213 0.803264 230 6 0.740385 39 2 0.710056 93 6 0.85782 89 6 0.82731 55 6 0.828309 186 6 0.739174 65 6 0.591667 19 1 0.601190 41 5 0.847222 39 2 0.84563 137 6 0.794444 38 5 0.471726 46 2 NA 0 0 0.830556 51 5 0.518519 42 6 0.792385 78 6 0.87121 105 6 0.86944 47 6 0.8132044 145 6 0.854167 25 2 0.84663 39 6 0.821925 157 6 0.922222 26 2 0.94444 30 5 0.746018 85 6 0.968182 38 4 0.96970 28 2 0.732143 55 6 0.645068 108 6 0.772827 89 6 0.79373 239 6 0.636111 57 4 0.69364 85 6 0.70006 107 6 0.82540 58 6 0.76310 51 5 0.85063 84 6 0.88021 203 6 0.866856 175 6 0.83357 125 6 0.852424 244 6 0.846473 145 6 0.830854 0.769231 0.744686 0.87989 0.78404 0.827949 0.776653 0.659148 0.665145 0.835840 0.84306 0.870927 0.59318 NA 0.850752 0.602339 0.80769 0.92105 0.903258 0.843648 0.81078 0.83237 0.840468 0.869486 0.96115 0.755898 0.945591 0.950786 0.748613 0.728553 0.809592 0.82943 0.685714 0.62691 0.72196 0.84921 0.76149 0.83935 0.886765 0.898200 0.82574 0.877179 0.879653 2 0.795469 0.805223 -0.00198191 6 0.790184 0.794230 -0.00404610 0.69307 0.579638 insignificant 1 1 insignificant 0.98608 0.0100215 weaklyHypometh 1 1 insignificant -0.07930531 0.062589 lowCoverage 1 lowCoverage 0.795469 0.7533937 0.046745 6 0.790184 0.7514701 0.038714 3.5384e-02 0.90103 weaklyHypermeth 1.00000000 1 insignificant 3.6164e-01 0.77180 insignificant 1.0000000 1 insignificant 0.010626 8.1289e-01 lowCoverage 1.0000000 lowCoverage 0.795469 0.852018 -0.067007 6 0.790184 0.858720 -0.0685364 0.999776 0.01282355 weaklyHypometh 1 1.00000 insignificant 0.99995 0.00349891 weaklyHypometh 1 1.000000 insignificant -0.100458 0.00247427 lowCoverage 0.309284 lowCoverage 0.805223 0.7533937 0.054014 6 0.794230 0.7514701 0.042760 3.0208e-02 0.79885 weaklyHypermeth 1.0000e+00 1 insignificant 0.02379308 0.99390 weaklyHypermeth 1.000000 1 insignificant 0.089931 0.0685121 lowCoverage 1.00000 lowCoverage 0.805223 0.852018 -0.063126 6 0.794230 0.858720 -0.064490 0.99977 0.0060621 weaklyHypometh 1 1 insignificant 0.96068 0.142911 insignificant 1 1 insignificant -0.021153 0.5042635 lowCoverage 1.00000 lowCoverage 0.7533937 0.852018 -0.117188 6 0.7514701 0.858720 -0.107250 0.99899 1.1990e-03 weaklyHypometh 1 7.9934e-02 weaklyHypometh 0.99729 1.1633e-02 weaklyHypometh 1 0.7522590 insignificant -0.111084 0.0209610 weaklyHypometh 1.0000 insignificant chr6 137875448 137876448 72838 OLIG3 ENSG00000177468 0.046462 125 5 0.012166 149 5 0.057143 107 5 0.00000 9 1 0.00000 50 5 0.036863 80 5 0.052473 138 5 0.062051 131 5 0.053241 132 5 0.041958 128 5 0.10234 154 5 0.080363 96 5 0.041579 176 5 NA 0 0 0.013594 146 5 0.011111 83 5 0.049908 120 5 0.06000 49 5 0.07440 124 5 0.0098901 178 5 0.099524 51 4 0.00000 25 1 0.039143 122 5 0.023529 81 5 0.00000 9 0 0.014768 194 5 0.058661 99 5 0.06000 39 5 0.034762 141 5 0.013339 295 5 0.058087 117 5 0.11630 168 5 0.014286 85 5 0.00000 78 5 0.00000 133 4 0.00000 15 1 0.00000 38 5 0.00000 168 5 0.02005 171 5 0.047586 136 5 0.00000 41 5 0.031548 102 5 0.015385 61 5 0.046258 0.012341 0.057708 0.00000 0.00000 0.037355 0.051422 0.062408 0.052633 0.042586 0.10219 0.083476 0.04186 NA 0.013796 0.010829 0.05075 0.06017 0.073091 0.010042 0.10063 0.00000 0.040109 0.022931 0.00000 0.014589 0.060258 0.063559 0.035008 0.013848 0.059322 0.11885 0.013317 0.00000 0.00000 0.00000 0.00000 0.00000 0.021240 0.047282 0.00000 0.032612 0.014993 1 0.047356 0.044743 0.00219301 5 0.044947 0.043609 0.00133811 0.14942 0.413718 insignificant 1 1 insignificant 0.16628 0.6636417 insignificant 1 1 insignificant -0.00077908 0.951188 lowCoverage 1 lowCoverage 0.047356 0.0019342 0.045770 5 0.044947 0.0018868 0.043060 1.0588e-05 0.99998 weaklyHypermeth 0.00081448 1 weaklyHypermeth 1.7039e-05 0.99997 weaklyHypermeth 0.0034078 1 weaklyHypermeth 0.040016 9.3816e-06 lowCoverage 0.0031272 lowCoverage 0.047356 0.027397 0.019827 5 0.044947 0.027216 0.0177309 0.066932 0.77302002 insignificant 1 1.00000 insignificant 0.07343 0.92619085 insignificant 1 1.000000 insignificant 0.019483 0.08791539 lowCoverage 1.000000 lowCoverage 0.044743 0.0019342 0.043261 5 0.043609 0.0018868 0.041722 5.6276e-04 0.99819 weaklyHypermeth 4.0197e-02 1 weaklyHypermeth 0.00035044 0.99710 weaklyHypermeth 0.045735 1 weaklyHypermeth 0.040795 0.0029324 lowCoverage 0.36655 lowCoverage 0.044743 0.027397 0.016971 5 0.043609 0.027216 0.016393 0.17363 0.7702435 insignificant 1 1 insignificant 0.25585 0.900829 insignificant 1 1 insignificant 0.020262 0.1510619 lowCoverage 1.00000 lowCoverage 0.0019342 0.027397 -0.025773 5 0.0018868 0.027216 -0.025329 0.99972 1.1613e-03 weaklyHypometh 1 7.9934e-02 weaklyHypometh 0.99951 1.2036e-02 weaklyHypometh 1 0.7522590 insignificant -0.020533 0.0597969 lowCoverage 1.0000 lowCoverage chr6 140023742 140024742 72934 ENSG00000205695 0.855196 341 7 0.899286 80 3 0.880767 87 7 0.83542 146 7 0.87415 40 5 0.856565 201 7 0.786467 101 7 0.903663 61 7 0.892157 94 7 0.922449 54 7 0.88935 141 7 0.772789 80 7 0.868710 129 7 NA 0 0 0.886621 86 7 0.839286 80 7 0.870487 66 7 0.90384 148 7 0.88143 117 7 0.8831039 183 7 0.873016 42 4 0.92744 53 6 0.918258 101 7 0.870918 54 7 0.83317 67 7 0.813704 117 7 0.958333 56 7 0.77823 37 6 0.804788 72 7 0.856708 135 7 0.823232 104 7 0.86520 223 7 0.836333 103 7 0.88130 77 7 0.77627 219 7 0.84929 134 7 0.85266 62 7 0.81989 120 7 0.91015 321 7 0.958156 311 7 0.93119 244 7 0.897206 289 7 0.839504 387 7 0.851858 0.888582 0.872357 0.82155 0.86401 0.853936 0.794517 0.904426 0.882636 0.929396 0.88375 0.765873 0.86268 NA 0.889538 0.824599 0.85680 0.89957 0.868349 0.877202 0.85897 0.92353 0.912305 0.857572 0.82656 0.813156 0.954127 0.764744 0.817026 0.855878 0.820659 0.85747 0.826279 0.87268 0.76520 0.83527 0.83888 0.81858 0.901964 0.955827 0.92563 0.887923 0.839631 6 0.863087 0.858624 -0.00081952 7 0.864808 0.864304 0.00050372 0.67179 0.594052 insignificant 1 1 insignificant 0.83957 0.5211060 insignificant 1 1 insignificant 0.00826268 0.649033 insignificant 1 insignificant 0.863087 0.8307692 0.041018 7 0.864808 0.8252430 0.039565 3.3283e-04 0.97615 weaklyHypermeth 0.02097160 1 weaklyHypermeth 1.9910e-02 0.95857 weaklyHypermeth 1.0000000 1 insignificant 0.032554 8.7474e-02 insignificant 1.0000000 insignificant 0.863087 0.917526 -0.039320 7 0.864808 0.903764 -0.0389557 0.997856 0.00554527 weaklyHypometh 1 1.00000 insignificant 0.98276 0.02518863 weaklyHypometh 1 1.000000 insignificant -0.038729 0.12718859 insignificant 1.000000 insignificant 0.858624 0.8307692 0.044384 7 0.864304 0.8252430 0.039061 3.9562e-03 0.94308 weaklyHypermeth 2.3272e-01 1 insignificant 0.05567887 0.94463 insignificant 1.000000 1 insignificant 0.024291 0.2722005 insignificant 1.00000 insignificant 0.858624 0.917526 -0.039622 7 0.864304 0.903764 -0.039459 0.97261 0.0824822 insignificant 1 1 insignificant 0.88233 0.395103 insignificant 1 1 insignificant -0.046991 0.0944227 insignificant 1.00000 insignificant 0.8307692 0.917526 -0.077102 7 0.8252430 0.903764 -0.078521 0.99661 7.8867e-07 weaklyHypometh 1 1.9717e-04 weaklyHypometh 0.99089 8.6543e-04 weaklyHypometh 1 0.1081794 insignificant -0.071282 0.0207911 weaklyHypometh 1.0000 insignificant chr6 142339437 142340437 73165 ENSG00000218351 0.748128 232 6 0.702398 149 6 0.63505 103 6 0.6768118 142 6 0.63333 42 4 0.682605 243 6 0.72739 68 5 0.69903 99 5 0.68262 92 6 0.7601190 81 6 0.728981 218 6 0.5902357 58 6 0.7736879 152 6 0.83333 18 2 0.727010 105 5 0.75707 57 5 0.797497 47 4 0.83467 188 6 0.72435 164 6 0.77347 163 6 0.818646 40 4 0.763810 39 5 0.627592 163 6 0.87037 53 4 0.84103 49 4 0.8138084 184 6 0.82364 58 4 0.61439 41 4 0.72759 173 6 0.7715279 235 6 0.65867 208 6 0.760884 296 6 0.640526 143 6 0.581895 95 6 0.604444 136 6 0.870909 38 4 0.617381 70 5 0.5904474 240 6 0.728466 219 6 0.7263644 251 6 0.7803690 193 6 0.7048196 202 6 0.737159 206 6 0.797643 0.739506 0.67816 0.7616716 0.77675 0.768058 0.71210 0.72501 0.77798 0.8573817 0.809878 0.6481481 0.8261788 0.84639 0.816630 0.81440 0.772295 0.851845 0.78782 0.79506 0.759921 0.772487 0.808521 0.86214 0.85000 0.8365912 0.81111 0.80476 0.78768 0.8267839 0.799898 0.792520 0.663601 0.6682325 0.687387 0.83749 0.697171 0.7346023 0.823993 0.8090128 0.8423385 0.7801577 0.817593 3 0.766625 0.7933723 -0.0308093 6 0.699031 0.7289641 -0.0299334 0.98908 0.061948 insignificant 1 1 insignificant 0.96862 0.031627 weaklyHypometh 1 1 insignificant -3.3274e-02 0.25616 insignificant 1 insignificant 0.766625 0.6786704 0.0888605 6 0.699031 0.5994768 0.0995539 1.8427e-05 0.99948285 weaklyHypermeth 1.1517e-03 1.00000 weaklyHypermeth 7.1100e-04 0.96601340 weaklyHypermeth 5.9250e-02 1.00000 weaklyHypermeth 0.0734554 1.6893e-01 insignificant 1.0000e+00 insignificant 0.767067 0.7740430 -0.0186838 6 0.732202 0.740974 -0.0087713 7.7655e-01 0.2620410 insignificant 1.0000e+00 1 insignificant 6.8346e-01 0.2249553 insignificant 1.0000e+00 1 insignificant -0.0110463 5.6894e-01 insignificant 1.0000000 insignificant 0.7933723 0.6786704 0.1183740 6 0.7289641 0.5994768 0.1294872 1.3101e-08 0.9999905 weaklyHypermeth 2.6201e-06 1 weaklyHypermeth 5.8061e-06 0.999861 weaklyHypermeth 1.9354e-03 1 weaklyHypermeth 0.10672947 6.9536e-02 insignificant 1.0000e+00 insignificant 0.7945205 0.7740430 0.01074709 6 0.7671247 0.740974 0.02615097 2.7699e-02 0.582736 weaklyHypermeth 1.0000e+00 1 insignificant 1.3277e-02 0.632503 weaklyHypermeth 1.0000e+00 1 insignificant 0.02222770 4.3143e-01 insignificant 1.0000000 insignificant 0.6801113 0.7740430 -0.1101145 6 0.6438341 0.740974 -0.0971397 0.997975 5.4173e-07 weaklyHypometh 1 1.0835e-04 weaklyHypometh 0.99048 5.1117e-04 weaklyHypometh 1 0.127793 insignificant -0.0845018 0.1210981 insignificant 1.00000 insignificant chr6 142348811 142349811 73166 ENSG00000218351 0.479592 90 7 0.437048 126 7 0.39087 48 5 0.4812373 102 7 0.52449 39 4 0.479762 81 7 0.41235 64 7 0.53265 82 5 0.46032 62 5 0.5147959 48 6 0.516866 115 7 0.4214286 26 4 0.3958137 54 6 0.52840 57 7 0.653912 30 2 0.41667 30 3 0.500000 23 2 0.62093 86 7 0.57738 57 6 0.48880 102 7 0.500000 29 2 0.357143 9 0 0.551587 41 3 0.58095 42 3 0.64678 65 5 0.4812925 106 7 0.45000 36 4 0.32857 16 1 0.48009 122 7 0.4957633 84 5 0.48166 74 7 0.546685 102 7 0.576570 111 7 0.458541 73 7 0.475830 80 7 0.404762 24 3 0.458101 47 5 0.5420918 58 4 0.580357 72 7 0.5652958 108 7 0.5714286 104 5 0.5069454 100 7 0.490476 49 5 0.519608 0.476981 0.43519 0.5477767 0.51681 0.497958 0.44599 0.53419 0.50436 0.5694678 0.532169 0.4509804 0.3833944 0.56402 0.720005 0.49837 0.559501 0.576953 0.61438 0.49471 0.500000 0.401961 0.595316 0.61111 0.65245 0.4953315 0.48179 0.23333 0.50520 0.4938605 0.497705 0.579649 0.614900 0.4566708 0.471727 0.47876 0.484042 0.5772934 0.610294 0.5760051 0.5906863 0.5170744 0.535948 0 0.517033 0.5289256 -0.0075288 5 0.496080 0.5083284 -0.0122487 0.72799 0.296676 insignificant 1 1 insignificant 0.79619 0.232645 insignificant 1 1 insignificant -4.4792e-05 0.99882 lowCoverage 1 lowCoverage 0.517033 0.5165394 -0.0107123 7 0.496080 0.5111719 -0.0150923 8.3188e-01 0.40060122 insignificant 1.0000e+00 1.00000 insignificant 5.2872e-01 0.68027428 insignificant 1.0000e+00 1.00000 insignificant 0.0056831 8.5433e-01 insignificant 1.0000e+00 insignificant 0.517033 0.5773672 -0.0476617 7 0.496080 0.550538 -0.0544587 9.8259e-01 0.0028472 weaklyHypometh 1.0000e+00 1 insignificant 9.9161e-01 0.0094975 weaklyHypometh 1.0000e+00 1 insignificant -0.0512348 5.9009e-02 insignificant 1.0000000 insignificant 0.5289256 0.5165394 0.0038888 5 0.5083284 0.5111719 -0.0028435 6.4102e-01 0.4558108 insignificant 1.0000e+00 1 insignificant 3.3105e-01 0.725948 insignificant 1.0000e+00 1 insignificant 0.00572791 8.7612e-01 lowCoverage 1.0000e+00 lowCoverage 0.5289256 0.5773672 -0.03983863 5 0.5083284 0.550538 -0.04220998 9.9170e-01 0.082597 insignificant 1.0000e+00 1 insignificant 9.8950e-01 0.109593 insignificant 1.0000e+00 1 insignificant -0.05118998 1.2444e-01 lowCoverage 1.0000000 lowCoverage 0.5165394 0.5773672 -0.0445383 7 0.5111719 0.550538 -0.0393664 0.914853 1.1685e-01 insignificant 1 1.0000e+00 insignificant 0.97763 7.1847e-02 insignificant 1 1.000000 insignificant -0.0569179 0.1054632 insignificant 1.00000 insignificant chr6 143208390 143209390 73217 HIVEP2 ENSG00000010818 0.335769 161 6 0.441161 161 6 0.50600 91 6 0.2501998 135 4 0.46353 56 4 0.554074 184 6 0.61528 76 4 0.24721 123 5 0.32463 140 6 0.4881433 106 6 0.613059 105 6 0.2663928 118 6 0.1497531 165 6 0.23906 29 3 0.228899 170 6 0.37704 52 4 0.085575 121 3 0.26136 139 6 0.24550 92 6 0.35623 166 6 0.520833 30 3 0.010870 138 3 0.543775 70 3 0.43946 77 6 0.15492 70 3 0.3431692 149 6 0.44668 102 4 0.47374 36 2 0.32949 98 6 0.4128312 271 6 0.23671 117 6 0.668839 131 6 0.009804 97 3 0.210012 90 6 0.464539 111 3 0.000000 36 3 0.272540 109 6 0.0510893 177 6 0.062814 234 6 0.0804491 152 6 0.0243371 193 3 0.1206710 200 6 0.092560 189 6 0.253966 0.218911 0.34405 0.2187760 0.13648 0.368060 0.37109 0.20804 0.13280 0.2872257 0.390079 0.2544262 0.1170561 0.24858 0.155993 0.32241 0.110670 0.128267 0.10296 0.30047 0.770160 0.021739 0.560551 0.41713 0.26029 0.2012242 0.29993 0.41382 0.29984 0.2950795 0.061684 0.591899 0.015590 0.1553189 0.041111 0.00000 0.022209 0.0177385 0.056537 0.0653532 0.0466533 0.0336937 0.051578 3 0.281172 0.3284047 -0.0480021 6 0.354320 0.3714770 -0.0171574 0.84679 0.213472 insignificant 1 1 insignificant 0.75656 0.112522 insignificant 1 1 insignificant -2.9332e-02 0.64171 lowCoverage 1 lowCoverage 0.281172 0.1693548 0.1685694 6 0.354320 0.2135762 0.1407434 1.8140e-07 0.99717473 weaklyHypermeth 1.3954e-05 1.00000 weaklyHypermeth 1.7614e-07 0.99999972 weaklyHypermeth 5.8714e-05 1.00000 weaklyHypermeth 0.1844454 5.8352e-02 lowCoverage 1.0000e+00 lowCoverage 0.281172 0.0578512 0.2194541 6 0.354320 0.076006 0.2783138 1.8448e-11 1.0000000 hypermethylated 6.1495e-09 1 hypermethylated 4.4978e-12 1.0000000 hypermethylated 2.2489e-09 1 hypermethylated 0.2762764 1.5611e-07 hypermethylated 0.0001497 hypermethylated 0.3284047 0.1693548 0.2138822 6 0.3714770 0.2135762 0.1579008 1.2390e-04 0.9805979 hypermethylated 8.8500e-03 1 hypermethylated 2.4056e-05 0.999776 hypermethylated 3.4366e-03 1 hypermethylated 0.21377779 4.0988e-02 lowCoverage 1.0000e+00 lowCoverage 0.3284047 0.0578512 0.26729602 6 0.3714770 0.076006 0.29547125 1.0831e-08 1.000000 hypermethylated 2.7078e-06 1 hypermethylated 6.6951e-07 1.000000 hypermethylated 2.2317e-04 1 hypermethylated 0.30560879 8.9854e-05 lowCoverage 0.0449269 lowCoverage 0.1693548 0.0578512 0.0646512 6 0.2135762 0.076006 0.1375705 0.013052 2.3202e-02 weaklyHypermeth 1 1.0000e+00 insignificant 0.43776 4.4480e-02 inconclusive 1 1.000000 insignificant 0.0918310 0.2791024 lowCoverage 1.00000 lowCoverage chr6 148872445 148873445 73515 ENSG00000215223 0.738076 256 5 0.699355 233 6 0.48867 135 6 0.7370233 189 4 0.69540 59 5 0.803920 231 6 0.83307 94 5 0.64639 132 6 0.63967 89 5 0.7724747 59 6 0.806281 273 6 0.6432692 62 6 0.5158296 180 6 0.36364 12 1 0.597457 125 6 0.72500 38 4 0.674625 418 5 0.31298 187 5 0.68791 128 6 0.82888 174 5 0.764202 58 6 0.228164 90 3 0.821886 133 5 0.62088 55 4 0.82473 55 4 0.6890215 252 6 0.69555 77 6 0.66640 40 4 0.64556 127 6 0.7769406 412 6 0.74151 251 6 0.766327 257 5 0.000000 247 6 0.029186 130 6 0.008772 225 5 0.000000 24 3 0.022219 162 6 0.0027322 275 6 0.145267 209 5 0.2455662 246 6 0.3205719 229 4 0.3033032 129 4 0.267911 239 4 0.856039 0.794622 0.58927 0.8617354 0.71611 0.887243 0.87907 0.77359 0.74924 0.8500290 0.837468 0.8002613 0.5898691 0.57423 0.682069 0.66162 0.838549 0.455293 0.80573 0.87692 0.908833 0.253557 0.888944 0.72791 0.78822 0.7925529 0.70267 0.72951 0.68395 0.8172940 0.846870 0.943551 0.000000 0.0012328 0.013409 0.00000 0.011951 0.0041767 0.245473 0.3604442 0.3885495 0.3652491 0.389348 4 0.766428 0.7731046 -0.0076382 6 0.595290 0.7617013 -0.1664111 0.94925 0.328296 insignificant 1 1 insignificant 0.88402 0.439809 insignificant 1 1 insignificant -2.6268e-02 0.64427 insignificant 1 insignificant 0.766678 0.0065851 0.7603166 6 0.694505 0.0103913 0.6841139 1.3709e-48 1.00000000 hypermethylated 1.3709e-45 1.00000 hypermethylated 1.4167e-15 1.00000000 hypermethylated 1.4167e-12 1.00000 hypermethylated 0.6500108 1.3453e-14 hypermethylated 1.3453e-11 hypermethylated 0.766678 0.3587060 0.4571713 5 0.694505 0.245677 0.4488285 6.5557e-24 1.0000000 hypermethylated 6.5557e-21 1 hypermethylated 9.6060e-14 1.0000000 hypermethylated 9.6060e-11 1 hypermethylated 0.4039719 2.9940e-07 lowCoverage 0.0001497 lowCoverage 0.7729790 0.0065851 0.7674397 6 0.7219848 0.0103913 0.7115935 3.1733e-42 1.0000000 hypermethylated 3.1733e-39 1 hypermethylated 8.8220e-13 1.000000 hypermethylated 8.8220e-10 1 hypermethylated 0.67627882 1.0920e-08 hypermethylated 1.0920e-05 hypermethylated 0.7729790 0.3587060 0.45920707 5 0.7219848 0.245677 0.47630809 4.1059e-23 1.000000 hypermethylated 4.1059e-20 1 hypermethylated 1.0280e-09 1.000000 hypermethylated 1.0280e-06 1 hypermethylated 0.43023985 1.2669e-06 lowCoverage 0.0012669 lowCoverage 0.0065851 0.3587060 -0.3388389 5 0.0103913 0.245677 -0.2352854 0.829909 7.3028e-16 hypomethylated 1 7.3028e-13 hypomethylated 0.87128 2.6710e-06 hypomethylated 1 0.002671 hypomethylated -0.2460390 0.0011151 lowCoverage 0.35592 lowCoverage chr6 156098876 156099876 73735 NOX3 ENSG00000074771 0.875168 267 5 0.741418 145 5 0.89981 149 5 0.9644269 130 5 0.89028 204 5 0.766176 91 5 0.90201 278 5 0.90971 147 5 0.92481 210 5 0.8773826 168 5 0.908321 410 5 0.9655172 123 5 0.9091376 129 5 0.89860 89 5 0.912657 122 5 0.76065 124 4 0.622299 1801 4 0.93528 254 5 0.87056 70 5 0.94016 124 5 0.885455 55 5 0.889774 141 5 0.928468 165 5 0.79212 136 5 0.87084 99 4 0.9157403 261 5 0.63697 60 4 0.71758 53 5 0.87778 55 5 0.9323569 316 5 0.94911 292 5 0.970707 119 5 0.636439 118 5 0.443382 75 5 0.988235 71 5 0.750000 4 0 0.716941 352 5 0.7875939 323 5 0.949876 374 5 0.9336364 85 5 0.9217058 139 5 0.9569106 195 5 0.964881 323 5 0.876184 0.738774 0.89750 0.9655303 0.89338 0.766881 0.90274 0.91194 0.92716 0.8771041 0.908721 0.9662356 0.9059300 0.90022 0.911064 0.76578 0.655993 0.934895 0.87233 0.93925 0.873750 0.890932 0.927106 0.79203 0.87058 0.9150943 0.62583 0.71729 0.87951 0.9330581 0.949926 0.973590 0.632139 0.4304381 0.986520 0.74522 0.717657 0.7876515 0.949585 0.9343876 0.9162738 0.9578131 0.965809 5 0.804767 0.8989726 -0.0874212 5 0.814128 0.8974971 -0.0833687 0.25538 0.015413 weaklyHypometh 1 1 insignificant 0.62358 0.568962 insignificant 1 1 insignificant 9.8113e-03 0.77980 lowCoverage 1 lowCoverage 0.804767 0.7147402 0.0784424 5 0.814128 0.7317889 0.0823395 7.6678e-08 0.64708681 weaklyHypermeth 6.3898e-06 1.00000 weaklyHypermeth 5.0455e-02 0.62820139 insignificant 1.0000e+00 1.00000 insignificant 0.1532867 9.1802e-02 lowCoverage 1.0000e+00 lowCoverage 0.804767 0.9534050 -0.1465813 5 0.814128 0.952256 -0.1381273 9.9508e-01 0.0145927 weaklyHypometh 1.0000e+00 1 insignificant 9.9979e-01 0.0028942 weaklyHypometh 1.0000e+00 1 insignificant -0.0716831 2.1677e-03 lowCoverage 0.3612804 lowCoverage 0.8989726 0.7147402 0.1775949 5 0.8974971 0.7317889 0.1657083 2.3352e-06 0.9987927 weaklyHypermeth 2.3352e-04 1 weaklyHypermeth 4.6730e-02 0.771304 weaklyHypermeth 1.0000e+00 1 insignificant 0.14347541 1.1369e-01 lowCoverage 1.0000e+00 lowCoverage 0.8989726 0.9534050 -0.05203497 5 0.8974971 0.952256 -0.05475860 9.9555e-01 0.032358 weaklyHypometh 1.0000e+00 1 insignificant 9.9415e-01 0.024717 weaklyHypometh 1.0000e+00 1 insignificant -0.08149438 1.7755e-02 lowCoverage 1.0000000 lowCoverage 0.7147402 0.9534050 -0.2329456 5 0.7317889 0.952256 -0.2204669 0.999988 1.9999e-05 hypomethylated 1 2.8570e-03 hypomethylated 0.98022 2.4405e-02 weaklyHypometh 1 1.000000 insignificant -0.2249698 0.0274714 lowCoverage 1.00000 lowCoverage chr6 156961288 156962288 73862 ENSG00000208442 0.852324 97 7 0.597657 241 9 0.48190 77 5 0.6439935 123 7 0.45017 49 3 0.772295 148 7 0.65513 78 7 0.57763 173 7 0.48294 88 7 0.6553571 58 6 0.766118 314 7 0.4166667 28 3 0.4274802 144 6 0.65797 77 6 0.570501 78 6 0.77778 11 1 0.333333 3 0 0.52402 83 6 0.79203 99 7 0.66902 91 6 0.733333 49 6 0.654762 39 2 0.610531 77 7 0.71182 50 6 0.56270 71 2 0.7146912 344 7 0.50190 90 6 0.71944 38 3 0.63564 75 7 0.6687927 575 7 0.60445 286 7 0.790146 142 7 0.394395 127 7 0.562371 37 3 0.631566 359 5 0.047619 67 1 0.377332 217 7 0.0364354 294 7 0.260053 78 7 0.3308710 66 7 0.3057393 76 7 0.7063492 26 1 0.616253 101 7 0.861723 0.586951 0.47085 0.6418883 0.26702 0.765709 0.53859 0.66959 0.47742 0.5828267 0.695365 0.4111702 0.4117457 0.58887 0.544073 0.60028 0.450612 0.587664 0.78792 0.65507 0.600557 0.658688 0.431945 0.64787 0.54870 0.6190206 0.55851 0.60771 0.61939 0.5594481 0.595681 0.717452 0.371812 0.5483616 0.710273 0.30328 0.418345 0.0430156 0.241391 0.3113753 0.3068459 0.7115839 0.500460 0 0.630403 0.6105664 0.0164216 7 0.546037 0.7457053 -0.1996681 0.74132 0.323014 insignificant 1 1 insignificant 0.98317 0.331562 insignificant 1 1 insignificant -5.3802e-02 0.18753 insignificant 1 insignificant 0.629175 0.4396004 0.2016755 7 0.529848 0.3039824 0.2258660 1.7552e-09 0.99836514 hypermethylated 2.5074e-07 1.00000 hypermethylated 2.7157e-04 0.99974049 hypermethylated 3.0175e-02 1.00000 hypermethylated 0.2635955 4.9751e-02 weaklyHypermeth 1.0000e+00 insignificant 0.631758 0.4668588 0.2218284 7 0.677609 0.531424 0.1461855 1.3561e-09 0.9890004 hypermethylated 3.3903e-07 1 hypermethylated 7.9010e-04 0.9981053 hypermethylated 1.5802e-01 1 insignificant 0.1613621 1.5361e-01 insignificant 1.0000000 insignificant 0.6084569 0.4396004 0.1718622 7 0.7194169 0.3039824 0.4154345 1.4833e-05 0.9968798 weaklyHypermeth 1.1410e-03 1 weaklyHypermeth 1.4216e-05 0.999988 weaklyHypermeth 2.3694e-03 1 weaklyHypermeth 0.31739736 2.6142e-02 weaklyHypermeth 1.0000e+00 insignificant 0.6101695 0.4668588 0.19742683 7 0.6882410 0.531424 0.15681711 1.4550e-10 1.000000 weaklyHypermeth 4.8499e-08 1 weaklyHypermeth 9.3684e-04 1.000000 weaklyHypermeth 1.8737e-01 1 insignificant 0.21516399 7.5143e-02 insignificant 1.0000000 insignificant 0.4412033 0.4637681 -0.0464280 7 0.3799780 0.472852 -0.0928739 0.664086 7.2925e-01 insignificant 1 1.0000e+00 insignificant 0.86040 4.2439e-01 insignificant 1 1.000000 insignificant -0.1022334 0.4744722 insignificant 1.00000 insignificant chr6 157048731 157049731 73868 ENSG00000220347 0.015506 288 5 0.023077 142 5 0.00000 163 5 0.0076923 125 5 0.00000 37 5 0.017544 309 5 0.00000 111 5 0.00000 131 5 0.00000 142 5 0.0060606 142 5 0.038147 162 5 0.0040816 126 5 0.0086957 126 5 NA 0 0 0.012692 152 5 0.00000 64 5 0.015128 132 5 0.01000 131 5 0.00000 102 5 0.00000 261 5 0.033333 38 5 0.000000 112 5 0.015459 197 5 0.00000 121 5 0.00000 86 5 0.0041667 234 5 0.00000 120 5 0.00000 40 5 0.00000 104 5 0.0064004 332 5 0.00000 238 5 0.015229 373 5 0.000000 94 5 0.010000 69 5 NA 0 0 0.000000 34 5 0.016667 44 5 0.0000000 204 5 0.000000 267 5 0.0090909 164 5 0.0037037 176 5 0.0047619 263 5 0.015319 232 5 0.017355 0.024260 0.00000 0.0080868 0.00000 0.018444 0.00000 0.00000 0.00000 0.0055944 0.037905 0.0058608 0.0091416 NA 0.015266 0.00000 0.014030 0.014359 0.00000 0.00000 0.030769 0.000000 0.015694 0.00000 0.00000 0.0038462 0.00000 0.00000 0.00000 0.0050809 0.000000 0.016167 0.000000 0.0143590 NA 0.00000 0.017521 0.0000000 0.000000 0.0095571 0.0034188 0.0068376 0.023379 5 0.010190 0.0065163 0.0039798 5 0.010787 0.0066633 0.0041238 0.28934 0.120300 insignificant 1 1 insignificant 0.43453 0.252830 insignificant 1 1 insignificant 2.1329e-03 0.57994 lowCoverage 1 lowCoverage 0.010190 0.0044944 0.0060258 5 0.010787 0.0041484 0.0066386 3.9210e-01 0.98087530 insignificant 1.0000e+00 1.00000 insignificant 5.3785e-01 0.98495415 insignificant 1.0000e+00 1.00000 insignificant 0.0030153 4.8862e-01 lowCoverage 1.0000e+00 lowCoverage 0.010190 0.0081744 0.0024221 5 0.010787 0.006924 0.0038630 5.4131e-01 0.1224420 insignificant 1.0000e+00 1 insignificant 7.8254e-01 0.1710954 insignificant 1.0000e+00 1 insignificant 0.0017736 6.2414e-01 lowCoverage 1.0000000 lowCoverage 0.0065163 0.0044944 0.0017787 5 0.0066633 0.0041484 0.0025148 1.3693e-01 0.8338329 insignificant 1.0000e+00 1 insignificant 3.5809e-01 0.854425 insignificant 1.0000e+00 1 insignificant 0.00088236 8.5000e-01 lowCoverage 1.0000e+00 lowCoverage 0.0065163 0.0081744 -0.00090183 5 0.0066633 0.006924 -0.00026078 3.1534e-01 0.364762 insignificant 1.0000e+00 1 insignificant 7.5404e-01 0.405899 insignificant 1.0000e+00 1 insignificant -0.00035934 9.2932e-01 insignificant 1.0000000 insignificant 0.0044944 0.0081744 -0.0034256 5 0.0041484 0.006924 -0.0027756 0.970010 3.9423e-01 insignificant 1 1.0000e+00 insignificant 0.99260 4.8023e-01 insignificant 1 1.000000 insignificant -0.0012417 0.7815385 lowCoverage 1.00000 lowCoverage chr6 161644348 161645348 73933 AGPAT4 ENSG00000026652 0.972894 134 5 0.896193 146 5 0.84048 86 5 0.9137116 120 5 0.88135 76 5 0.919100 163 5 0.86646 152 5 0.90867 110 5 0.80455 67 5 0.9612308 127 5 0.911947 168 5 0.8500000 51 5 0.9439847 66 5 0.90144 64 5 0.922556 118 5 0.85455 55 5 NA 0 0 0.80278 104 5 0.98754 200 5 0.95442 172 5 1.000000 22 1 1.000000 10 0 0.916619 139 5 0.82359 72 5 0.90000 17 0 0.9286015 179 5 0.73378 96 5 0.98182 41 5 0.84969 154 5 0.9245238 279 5 0.93839 187 5 0.944118 130 5 0.973333 117 5 0.973711 118 5 0.963636 118 5 NA 0 0 0.959559 101 5 0.9435897 167 5 0.920998 194 5 0.9426512 111 5 0.9674528 85 5 0.9522207 202 5 0.963388 85 5 0.962244 0.901464 0.85441 0.9258734 0.88251 0.927411 0.87993 0.90869 0.82929 0.9695954 0.928036 0.8888889 0.9374996 0.91826 0.922556 0.89226 NA 0.849897 0.98481 0.94575 1.000000 1.000000 0.927927 0.86082 0.91852 0.9307085 0.88565 0.96296 0.87551 0.9334080 0.934380 0.952832 0.978272 0.9744544 0.973064 NA 0.964161 0.9336657 0.930469 0.9408944 0.9679595 0.9506164 0.966161 1 0.919229 0.9252830 -0.0062680 5 0.908861 0.9147493 -0.0058886 0.86797 0.382480 insignificant 1 1 insignificant 0.99520 0.041919 weaklyHypometh 1 1 insignificant -1.2085e-02 0.64143 lowCoverage 1 lowCoverage 0.919229 0.9645161 -0.0444409 5 0.908861 0.9600741 -0.0512135 9.9463e-01 0.00052265 weaklyHypometh 1.0000e+00 0.52265 insignificant 9.9672e-01 0.00027298 weaklyHypometh 1.0000e+00 0.27298 insignificant -0.0630900 1.0817e-04 lowCoverage 2.7043e-02 lowCoverage 0.919229 0.9527326 -0.0292829 5 0.908861 0.945102 -0.0362414 9.9789e-01 0.0288550 weaklyHypometh 1.0000e+00 1 insignificant 9.9813e-01 0.0113945 weaklyHypometh 1.0000e+00 1 insignificant -0.0496662 3.1739e-03 lowCoverage 0.4534186 lowCoverage 0.9245852 0.9645733 -0.0389402 5 0.7622911 0.9667284 -0.2044374 9.9922e-01 0.0040502 weaklyHypometh 1.0000e+00 1 insignificant 9.3824e-01 0.074878 insignificant 1.0000e+00 1 insignificant -0.05100489 4.6660e-02 lowCoverage 1.0000e+00 lowCoverage 0.9252830 0.9527326 -0.02292341 5 0.9147493 0.945102 -0.03035276 9.9326e-01 0.084655 insignificant 1.0000e+00 1 insignificant 8.9432e-01 0.438660 insignificant 1.0000e+00 1 insignificant -0.03758111 1.3861e-01 lowCoverage 1.0000000 lowCoverage 0.9645161 0.9527326 0.0147708 5 0.9600741 0.945102 0.0149721 0.230419 7.8246e-01 insignificant 1 1.0000e+00 insignificant 0.28620 7.7270e-01 insignificant 1 1.000000 insignificant 0.0134238 0.2207943 lowCoverage 1.00000 lowCoverage chr6 163950164 163951164 74061 QKI ENSG00000112531 0.88948 228 6 0.82314 223 6 0.76111 85 6 0.81244 162 6 0.86784 109 6 0.70455 177 6 0.69577 86 4 0.87793 153 6 0.80991 85 6 0.71008 69 3 0.80189 168 6 0.80000 38 5 0.90725 131 6 0.77313 101 6 0.80613 106 6 0.61758 41 4 0.83333 12 0 0.70134 264 6 0.89551 104 3 0.89495 140 6 0.91667 37 6 0.70833 55 3 0.79868 97 6 0.81134 48 4 0.90708 73 5 0.70066 179 6 0.85241 111 6 0.69227 36 1 0.85326 151 6 0.79844 308 6 0.72515 190 6 0.70712 146 6 0.705447 172 6 0.522321 51 6 0.80050 255 6 1.00000 2 0 0.658486 112 6 0.65567 142 6 0.89182 161 6 0.85694 143 6 0.87922 116 4 0.86111 143 4 0.81100 126 5 0.82389 0.82415 0.78025 0.82741 0.89283 0.88919 0.76744 0.87664 0.82387 0.76837 0.82954 0.85802 0.87031 0.79132 0.81908 0.60391 0.90123 0.69895 0.89993 0.86332 0.94342 0.64352 0.79477 0.76187 0.93117 0.87836 0.79453 0.57577 0.84206 0.88300 0.80898 0.81234 0.673935 0.4999449 0.46494 0.63128 0.63620 0.595496 0.86835 0.70292 0.87276 0.79218 0.82952 1 0.81789 0.84347 -0.0138855 6 0.80193 0.76558 0.0363494 0.64159 0.63019602 insignificant 1 1.00000 insignificant 0.35240 0.57683658 insignificant 1 1.00000 insignificant 0.00988602 0.7422556 insignificant 1 insignificant 0.81789 0.44414 0.358230 6 0.80193 0.74504 0.05688844 2.7639e-07 9.3796e-01 hypermethylated 9.2130e-06 1.000000 hypermethylated 1.0110e-02 0.8329560 weaklyHypermeth 2.8083e-01 1.00000 insignificant 0.0754312 3.1626e-01 insignificant 1.0000e+00 insignificant 0.81789 0.82293 -0.0150442 6 0.80193 0.90026 -0.098331 9.8646e-01 4.9611e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.5410e-01 1.0453e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0608505 1.5125e-02 weaklyHypometh 1.00000 insignificant 0.84347 0.44414 0.369410 6 0.76558 0.74504 0.0205391 5.4793e-05 0.922898 hypermethylated 1.6604e-03 1 hypermethylated 4.7871e-02 0.950001 weaklyHypermeth 1.0000e+00 1 insignificant 0.0655452 3.8617e-01 insignificant 1.0000e+00 insignificant 0.84347 0.82293 0.0040225 6 0.76558 0.90026 -0.1346803 9.4987e-01 0.151069 insignificant 1.0000e+00 1 insignificant 9.9260e-01 0.090788 insignificant 1.0000e+00 1 insignificant -0.0707365 2.0567e-02 weaklyHypometh 1.000000 insignificant 0.44414 0.82293 -0.3392014 6 0.74504 0.90026 -0.155219 1.0000e+00 8.8131e-04 hypomethylated 1.0000e+00 2.7541e-02 hypomethylated 1.0000e+00 2.3370e-02 weaklyHypometh 1.0000e+00 6.8737e-01 insignificant -0.1362817 9.5962e-02 insignificant 1.0000000 insignificant chr6 169952609 169953609 74148 C6orf70 ENSG00000130023 0.69065 274 8 0.71083 237 8 0.74738 160 7 0.54799 233 8 0.71303 98 6 0.70948 367 8 0.64966 237 8 0.57694 176 6 0.80998 101 4 0.79008 111 6 0.74942 298 8 0.75848 65 6 0.75617 88 4 0.60240 70 4 0.66538 150 4 0.76987 70 6 1.00000 1 0 0.56895 339 8 0.79244 329 6 0.78238 377 8 0.78780 92 7 0.63492 21 1 0.79010 217 8 0.72323 107 6 0.73274 156 5 0.77823 259 8 0.71369 154 7 0.56374 61 4 0.70357 307 8 0.75549 423 8 0.83369 310 8 0.81165 319 8 0.438116 239 8 0.455207 267 8 0.54514 256 7 0.39862 111 5 0.566496 251 8 0.47064 366 8 0.40315 465 8 0.45526 376 8 0.46529 221 8 0.58249 359 6 0.47995 252 8 0.58103 0.63887 0.58314 0.49955 0.54138 0.62172 0.66757 0.62087 0.67904 0.66405 0.67781 0.65588 0.62112 0.68861 0.65470 0.68414 NA 0.47778 0.75636 0.60893 0.74172 0.53944 0.64257 0.49616 0.67136 0.67843 0.59001 0.66051 0.68454 0.70064 0.76223 0.72819 0.410812 0.4343625 0.43209 0.37839 0.37718 0.416911 0.28455 0.33622 0.30935 0.37006 0.37793 4 0.64235 0.70569 -0.0624688 8 0.75974 0.71144 0.0483078 1.00000 0.01127106 weaklyHypometh 1 1.00000 insignificant 0.99861 0.30927683 insignificant 1 1.00000 insignificant -0.01616261 0.6174629 insignificant 1 insignificant 0.64235 0.41275 0.221673 8 0.73305 0.53385 0.19919564 1.1206e-12 1.0000e+00 hypermethylated 7.0040e-11 1.000000 hypermethylated 3.0317e-09 1.0000000 hypermethylated 3.7896e-07 1.00000 hypermethylated 0.2405384 9.1668e-06 hypermethylated 1.8334e-03 hypermethylated 0.64225 0.34967 0.2946037 8 0.73305 0.41291 0.320135 8.7507e-19 9.9997e-01 hypermethylated 4.3753e-16 1.0000000 hypermethylated 3.1077e-10 1.0000e+00 hypermethylated 1.5539e-07 1.000000 hypermethylated 0.2423470 7.9283e-05 hypermethylated 0.07745 hypermethylated 0.70586 0.41196 0.286523 8 0.76430 0.47559 0.2887104 2.4112e-16 1.000000 hypermethylated 2.1920e-14 1 hypermethylated 2.4066e-10 1.000000 hypermethylated 3.4380e-08 1 hypermethylated 0.2567010 8.1062e-06 hypermethylated 1.6212e-03 hypermethylated 0.70557 0.34967 0.3459379 8 0.67937 0.41291 0.2664599 5.5076e-23 1.000000 hypermethylated 2.7538e-20 1 hypermethylated 1.3218e-10 1.000000 hypermethylated 6.6091e-08 1 hypermethylated 0.2585096 6.7441e-05 hypermethylated 0.067441 hypermethylated 0.41196 0.34988 0.0469195 8 0.47559 0.46453 0.011057 1.3280e-01 2.5650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7645e-01 1.4027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0018086 9.6445e-01 insignificant 1.0000000 insignificant chr7 1110396 1111396 74159 GPER ENSG00000164850 0.85921 523 9 0.88317 472 9 0.86046 328 9 0.94642 316 10 0.93009 192 7 0.86101 674 9 0.81562 301 9 0.86148 257 9 0.91847 225 7 0.82515 283 9 0.75813 551 9 0.91169 121 9 0.97769 233 7 0.80937 104 5 0.96400 302 7 0.90739 129 6 1.00000 18 2 0.79142 354 9 0.95665 552 9 0.93509 659 9 0.88764 122 9 1.00000 20 2 0.93079 344 9 0.86897 260 9 1.00000 32 2 0.92619 509 9 0.94900 287 9 0.94586 113 9 0.95532 454 9 0.95776 538 9 0.95650 460 9 0.92553 592 9 0.918592 398 9 0.847290 438 9 0.77778 278 7 0.75000 72 5 0.899958 274 9 0.89820 587 9 0.91538 564 9 0.71590 513 9 0.93727 311 9 0.90566 395 9 0.75502 334 9 0.95712 0.88659 0.84181 0.92635 0.92010 0.93597 0.86674 0.89517 0.89506 0.91866 0.92436 0.90534 0.96755 0.90539 0.94378 0.89918 0.95601 0.85044 0.95187 0.94321 0.86354 1.00000 0.92583 0.96923 1.00000 0.91795 0.92385 0.93907 0.95321 0.95625 0.94589 0.92273 0.917218 0.7934363 0.79832 0.83687 0.89591 0.930744 0.88025 0.95634 0.92450 0.89997 0.84427 5 0.92203 0.94130 -0.0193120 9 0.83142 0.90245 -0.0710332 0.99994 0.04993544 weaklyHypometh 1 1.00000 insignificant 1.00000 0.01375591 weaklyHypometh 1 1.00000 insignificant -0.05333889 0.0076162 weaklyHypometh 1 insignificant 0.92213 0.88422 0.042867 9 0.83103 0.88849 -0.05745566 1.7668e-02 3.0416e-01 weaklyHypermeth 3.6532e-01 1.000000 insignificant 6.5428e-01 0.1721698 insignificant 1.0000e+00 1.00000 insignificant 0.0399886 2.5212e-01 insignificant 1.0000e+00 insignificant 0.92120 0.90175 0.0227819 9 0.78407 0.71159 0.072485 3.8192e-01 9.8733e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.1354e-01 9.8253e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0427785 4.1593e-01 insignificant 1.00000 insignificant 0.94126 0.88422 0.059967 9 0.88294 0.88849 -0.0055491 1.0737e-02 0.610121 weaklyHypermeth 2.3850e-01 1 insignificant 5.0816e-02 0.949167 insignificant 1.0000e+00 1 insignificant 0.0933275 2.0718e-02 weaklyHypermeth 7.2743e-01 insignificant 0.94130 0.90260 0.0428181 9 0.90245 0.83019 0.0722660 4.0979e-04 0.998706 weaklyHypermeth 2.4105e-02 1 weaklyHypermeth 1.1536e-02 0.999940 weaklyHypermeth 8.2398e-01 1 insignificant 0.0961174 1.0336e-01 insignificant 1.000000 insignificant 0.88422 0.90280 -0.0274460 9 0.88849 0.81622 0.072268 7.6041e-01 7.3640e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3826e-01 9.5925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0027899 9.6028e-01 insignificant 1.0000000 insignificant chr7 1428147 1429147 74161 UNCX ENSG00000164853 0.76630 96 6 0.79421 89 5 0.53846 86 6 0.74579 67 11 0.78472 45 2 0.77138 132 13 0.66270 67 3 0.90493 145 8 0.82288 55 3 0.84744 64 3 0.85193 230 13 0.83996 36 2 0.80917 214 13 0.94000 38 3 0.86061 77 4 0.77083 22 2 0.72078 53 6 0.70243 173 12 0.91563 126 13 0.54905 103 8 0.80538 119 11 0.63362 108 8 0.61729 87 4 0.82083 53 5 0.77198 75 12 0.88729 211 9 0.72496 104 11 0.81714 43 6 0.83053 151 10 0.80854 263 13 0.84009 225 11 0.82527 178 11 0.400253 88 8 0.272964 120 11 0.33333 160 4 0.33027 62 7 0.376318 77 9 0.45416 172 11 0.59423 111 9 0.69476 106 10 0.71675 73 9 0.65340 95 6 0.46275 68 6 0.77563 0.77277 0.62989 0.87246 0.79346 0.74953 0.74070 0.85550 0.86042 0.88203 0.88768 0.81614 0.75920 0.80800 0.81377 0.77376 0.74372 0.61045 0.92529 0.67359 0.85517 0.60009 0.59840 0.81123 0.73266 0.85076 0.69715 0.87296 0.82653 0.85371 0.81456 0.87524 0.276208 0.1334143 0.17964 0.30751 0.20885 0.347702 0.61028 0.70494 0.79462 0.69729 0.67660 1 0.80501 0.82498 -0.0180944 9 0.79122 0.79712 -0.0059082 0.64877 0.22124913 insignificant 1 1.00000 insignificant 0.52404 0.48152238 insignificant 1 1.00000 insignificant -0.00195065 0.9544470 insignificant 1 insignificant 0.80501 0.34904 0.448132 9 0.79122 0.37933 0.41188219 8.4507e-41 9.9999e-01 hypermethylated 1.6901e-38 1.000000 hypermethylated 1.8618e-15 1.0000000 hypermethylated 3.7237e-13 1.00000 hypermethylated 0.4187427 6.8372e-09 hypermethylated 3.4186e-06 hypermethylated 0.80501 0.64238 0.1220970 5 0.79122 0.62524 0.165976 1.2243e-08 1.0000e+00 weaklyHypermeth 2.0406e-06 1.0000000 weaklyHypermeth 9.0180e-05 9.9999e-01 weaklyHypermeth 1.8036e-02 1.000000 weaklyHypermeth 0.1555814 2.1311e-02 weaklyHypermeth 1.00000 insignificant 0.82498 0.34904 0.470137 11 0.79712 0.37933 0.4177904 1.4374e-30 1.000000 hypermethylated 2.3956e-28 1 hypermethylated 2.5076e-13 1.000000 hypermethylated 5.0152e-11 1 hypermethylated 0.4206934 2.2541e-08 hypermethylated 1.1271e-05 hypermethylated 0.82498 0.64238 0.1429134 7 0.79712 0.62524 0.1718847 2.3260e-08 1.000000 weaklyHypermeth 4.6520e-06 1 weaklyHypermeth 6.5338e-05 0.999956 weaklyHypermeth 1.0890e-02 1 weaklyHypermeth 0.1575320 2.0562e-02 weaklyHypermeth 1.000000 insignificant 0.34904 0.64238 -0.3869398 7 0.37933 0.62524 -0.245906 9.8931e-01 5.5132e-12 hypomethylated 1.0000e+00 1.1160e-09 hypomethylated 9.9917e-01 2.5065e-06 hypomethylated 1.0000e+00 5.0130e-04 hypomethylated -0.2631614 1.9189e-03 weaklyHypometh 0.1988427 insignificant chr7 1539738 1540738 74162 MAFK ENSG00000198517 0.85499 542 17 0.74732 548 18 0.73929 533 18 0.91206 449 14 0.83962 340 18 0.88614 909 18 0.83268 486 18 0.76522 474 17 0.83905 449 16 0.88742 527 18 0.83572 702 18 0.76327 315 16 0.69270 707 18 0.76214 163 8 0.77157 439 18 0.83761 160 12 0.74456 184 12 0.57148 666 17 0.77871 686 18 0.83305 568 18 0.86785 331 17 0.82130 146 8 0.80056 482 18 0.76633 257 18 0.89689 211 8 0.85041 728 18 0.70142 300 17 0.62025 171 12 0.80028 656 17 0.81120 829 18 0.84774 748 18 0.85713 684 18 0.424666 705 18 0.372847 660 18 0.49357 612 13 0.24821 215 11 0.409247 348 17 0.40141 957 18 0.84045 458 17 0.80410 571 18 0.85830 333 14 0.84842 521 17 0.86114 362 15 0.83554 0.72312 0.71955 0.89036 0.82041 0.87195 0.79498 0.76546 0.81570 0.87394 0.84140 0.72311 0.62107 0.74791 0.76233 0.77025 0.76640 0.58763 0.79915 0.85443 0.85378 0.78178 0.76884 0.76940 0.80711 0.83429 0.75636 0.66872 0.77014 0.77432 0.80367 0.84851 0.367798 0.2868509 0.42140 0.34613 0.35165 0.350061 0.82362 0.79709 0.82690 0.81957 0.83781 9 0.80705 0.82422 -0.0225243 18 0.77380 0.71383 0.0599721 0.98650 0.06274694 insignificant 1 1.00000 insignificant 0.96797 0.20466012 insignificant 1 1.00000 insignificant -0.00871573 0.7612898 insignificant 1 insignificant 0.80718 0.38404 0.382458 18 0.78911 0.37632 0.41279101 5.7744e-80 1.0000e+00 hypermethylated 2.8872e-77 1.000000 hypermethylated 2.2674e-23 1.0000000 hypermethylated 1.1337e-20 1.00000 hypermethylated 0.4030715 4.7171e-06 hypermethylated 1.1793e-03 hypermethylated 0.80713 0.84365 -0.0260455 17 0.78354 0.80844 -0.024896 9.6322e-01 1.3187e-03 weaklyHypometh 1.0000e+00 0.2637333 insignificant 9.9800e-01 1.5605e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0477548 2.8049e-02 weaklyHypometh 1.00000 insignificant 0.82467 0.38404 0.422326 18 0.81581 0.37632 0.4394896 1.0888e-66 1.000000 hypermethylated 5.4440e-64 1 hypermethylated 6.0129e-21 1.000000 hypermethylated 3.0064e-18 1 hypermethylated 0.4117872 1.5513e-06 hypermethylated 3.8782e-04 hypermethylated 0.82452 0.84365 -0.0099564 17 0.77872 0.80844 -0.0297136 9.8668e-01 0.088770 insignificant 1.0000e+00 1 insignificant 9.8882e-01 0.124501 insignificant 1.0000e+00 1 insignificant -0.0390391 1.3363e-01 insignificant 1.000000 insignificant 0.38404 0.84358 -0.4102851 17 0.37632 0.79931 -0.422999 1.0000e+00 3.3634e-40 hypomethylated 1.0000e+00 1.6817e-37 hypomethylated 1.0000e+00 1.2517e-13 hypomethylated 1.0000e+00 6.2587e-11 hypomethylated -0.4508263 1.3624e-05 hypomethylated 0.0068119 hypomethylated chr7 1645325 1646325 74163 ENSG00000217472 0.86173 187 8 0.85525 284 9 0.81638 359 10 0.91842 156 7 0.88502 224 9 0.91028 280 9 0.88685 335 9 0.84791 290 9 0.75787 307 9 0.83290 271 9 0.79023 325 9 0.68067 269 9 0.80722 413 10 0.91941 102 6 0.86415 357 10 0.59176 202 9 0.56800 196 7 0.76619 170 5 0.88718 247 7 0.90480 268 9 0.88075 122 8 0.80743 75 6 0.87494 218 8 0.90635 178 9 0.81441 64 6 0.81692 360 9 0.79632 156 9 0.79204 129 10 0.84589 265 10 0.84763 427 9 0.88471 332 9 0.88236 264 8 0.321561 364 9 0.199188 216 9 0.44893 396 7 0.20206 68 7 0.490808 187 10 0.16316 385 9 0.71380 141 7 0.62633 157 6 0.46437 108 5 0.50780 109 8 0.70421 122 8 0.85915 0.77368 0.84525 0.88272 0.90741 0.89702 0.89938 0.85296 0.78281 0.89488 0.82305 0.71900 0.85542 0.83733 0.84648 0.59232 0.66928 0.68849 0.85752 0.88190 0.98080 0.73620 0.84792 0.84951 0.72299 0.88601 0.84431 0.87135 0.82654 0.87944 0.86992 0.87696 0.272563 0.1535586 0.35348 0.16763 0.42310 0.122038 0.75138 0.66021 0.61378 0.52821 0.74362 5 0.84910 0.87123 -0.0203091 9 0.84250 0.86764 -0.0251453 0.99320 0.08387782 insignificant 1 1.00000 insignificant 0.99706 0.07246949 insignificant 1 1.00000 insignificant -0.02820123 0.2778079 insignificant 1 insignificant 0.84910 0.31455 0.552269 9 0.84250 0.31536 0.52713677 3.7685e-59 1.0000e+00 hypermethylated 9.4212e-57 1.000000 hypermethylated 3.0885e-18 1.0000000 hypermethylated 7.7214e-16 1.00000 hypermethylated 0.5133266 8.9109e-05 hypermethylated 1.1139e-02 hypermethylated 0.84910 0.71361 0.1322359 6 0.84250 0.64863 0.193871 8.7382e-14 1.0000e+00 weaklyHypermeth 2.1845e-11 1.0000000 weaklyHypermeth 1.1548e-06 9.9414e-01 weaklyHypermeth 2.8870e-04 1.000000 weaklyHypermeth 0.2143099 9.1643e-03 weaklyHypermeth 0.83312 insignificant 0.86988 0.31498 0.576650 9 0.78877 0.37760 0.4111655 3.0673e-48 1.000000 hypermethylated 7.6682e-46 1 hypermethylated 3.4701e-16 0.999999 hypermethylated 8.6752e-14 1 hypermethylated 0.5415278 1.5673e-04 hypermethylated 1.7848e-02 hypermethylated 0.86988 0.70801 0.1566387 6 0.78877 0.58966 0.1991056 3.0888e-14 1.000000 weaklyHypermeth 1.0296e-11 1 weaklyHypermeth 2.1064e-06 0.999988 weaklyHypermeth 5.2659e-04 1 weaklyHypermeth 0.2425111 7.4969e-03 weaklyHypermeth 1.000000 insignificant 0.31498 0.70801 -0.3944611 6 0.37760 0.58966 -0.212060 1.0000e+00 5.5802e-12 hypomethylated 1.0000e+00 1.1160e-09 hypomethylated 9.9957e-01 6.9857e-06 hypomethylated 1.0000e+00 1.1643e-03 hypomethylated -0.2990167 3.5041e-03 weaklyHypometh 0.2502960 insignificant chr7 1815104 1816104 74169 ENSG00000205971 0.75612 42 4 0.70476 50 7 0.75121 46 2 0.82349 57 6 0.53571 21 1 0.83542 143 6 0.60748 36 5 0.78571 31 2 0.73016 28 2 0.68333 34 3 0.66201 88 7 0.47222 19 1 0.72338 50 5 1.00000 8 0 0.92857 22 1 0.66667 8 0 0.85714 8 0 0.80612 49 6 0.86797 44 5 0.75855 118 7 0.66667 10 1 0.70952 46 6 0.74677 54 7 1.00000 21 2 0.80655 46 4 0.77950 51 5 0.57143 29 2 0.77143 20 1 0.31190 29 3 0.83201 77 7 0.83748 51 4 0.73730 132 7 0.797919 45 2 0.685426 33 2 0.41091 55 2 0.64182 36 1 0.631169 63 3 0.84847 56 5 0.80788 70 6 0.85354 69 6 0.69722 45 4 0.71548 45 5 0.88131 64 5 0.85000 0.70146 0.84889 0.89756 0.61735 0.86770 0.78328 0.93878 0.70975 0.72007 0.84107 0.64966 0.88126 0.99633 0.77269 0.82906 1.00000 0.90379 0.90167 0.81629 0.80380 0.75102 0.79133 0.86057 0.88673 0.81127 0.59184 0.87551 0.42211 0.84221 0.92247 0.78284 0.845767 0.6625438 0.28087 0.83555 0.72851 0.945190 0.79935 0.87291 0.86429 0.85051 0.93321 1 0.77827 0.77032 0.0218060 5 0.75779 0.73225 0.0255317 0.28815 0.90173352 insignificant 1 1.00000 insignificant 0.30145 0.90756895 insignificant 1 1.00000 insignificant 0.01692192 0.7660922 lowCoverage 1 lowCoverage 0.77827 0.69097 0.116435 2 0.75779 0.69587 0.06191428 1.5133e-02 9.2557e-01 lowCoverage 3.2199e-01 1.000000 lowCoverage 1.7290e-01 0.7907136 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0785163 2.9016e-01 lowCoverage 1.0000e+00 lowCoverage 0.77827 0.80546 -0.0420750 4 0.75779 0.81080 -0.053011 9.5972e-01 1.2214e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.3126e-01 2.8908e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0432841 3.7261e-01 lowCoverage 1.00000 lowCoverage 0.77032 0.69097 0.104591 2 0.73225 0.69587 0.0363826 9.2172e-02 0.702680 lowCoverage 1.0000e+00 1 lowCoverage 2.4266e-01 0.520397 lowCoverage 1.0000e+00 1 lowCoverage 0.0615944 4.5325e-01 lowCoverage 1.0000e+00 lowCoverage 0.77032 0.80546 -0.0604409 4 0.73225 0.81080 -0.0785429 9.8710e-01 0.061840 lowCoverage 1.0000e+00 1 lowCoverage 9.6367e-01 0.132819 lowCoverage 1.0000e+00 1 lowCoverage -0.0602060 3.3796e-01 lowCoverage 1.000000 lowCoverage 0.69097 0.80546 -0.1705572 1 0.69587 0.81080 -0.114925 9.9335e-01 1.5530e-02 lowCoverage 1.0000e+00 3.7879e-01 lowCoverage 9.5592e-01 3.8679e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1218004 1.3266e-01 lowCoverage 1.0000000 lowCoverage chr7 1915697 1916697 74170 ENSG00000215135 0.90351 380 11 0.85127 221 11 0.81148 220 11 0.92728 439 9 0.78163 105 7 0.86666 568 11 0.94261 200 9 0.92375 202 11 0.93629 215 11 0.91171 194 11 0.91684 289 11 0.93113 84 7 0.97423 306 11 0.97222 93 4 0.94383 218 11 0.92664 78 4 0.88444 75 7 0.94556 447 9 0.95436 202 11 0.89006 379 11 0.93479 101 10 0.88744 186 9 0.91339 238 11 0.88333 95 11 0.98086 118 9 0.92522 242 11 0.88235 148 11 0.87101 94 9 0.93369 209 11 0.91630 292 11 0.94469 247 11 0.93136 413 11 0.926067 170 11 0.789590 234 11 0.88889 166 6 0.95569 88 6 0.922088 164 11 0.82752 281 11 0.91312 423 9 0.93629 474 11 0.79939 311 9 0.89506 386 9 0.81614 413 9 0.90453 0.86794 0.87215 0.92793 0.83184 0.89759 0.95291 0.94207 0.90261 0.88294 0.91779 0.94577 0.96077 0.95125 0.92890 0.94139 0.91806 0.93312 0.94990 0.87899 0.88406 0.85807 0.94077 0.95397 0.96505 0.95746 0.91153 0.88722 0.93110 0.93988 0.93909 0.91227 0.931202 0.8785293 0.90007 0.96634 0.89604 0.854831 0.90789 0.93826 0.90701 0.89609 0.92893 7 0.91414 0.92740 -0.0138142 11 0.91008 0.91156 -0.0014756 0.97038 0.21135375 insignificant 1 1.00000 insignificant 0.98220 0.29179776 insignificant 1 1.00000 insignificant -0.00726045 0.6200450 insignificant 1 insignificant 0.91417 0.90027 0.010382 11 0.91192 0.88859 0.02333008 9.1331e-02 1.8132e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8898e-01 0.0289030 inconclusive 1.0000e+00 1.00000 insignificant 0.0248010 4.1231e-01 insignificant 1.0000e+00 insignificant 0.91405 0.91231 -0.0012824 9 0.90259 0.83935 0.063241 6.1193e-01 5.6977e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.2105e-01 6.9931e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0377767 2.5053e-01 insignificant 1.00000 insignificant 0.92758 0.90027 0.026193 11 0.92578 0.88859 0.0371952 6.4026e-02 0.638791 insignificant 1.0000e+00 1 insignificant 7.1754e-01 0.200017 insignificant 1.0000e+00 1 insignificant 0.0320615 2.8910e-01 insignificant 1.0000e+00 insignificant 0.92725 0.91231 0.0137377 9 0.90419 0.83935 0.0648399 8.9058e-02 0.828190 insignificant 1.0000e+00 1 insignificant 2.4906e-02 0.981021 weaklyHypermeth 1.0000e+00 1 insignificant 0.0450372 1.7757e-01 insignificant 1.000000 insignificant 0.90027 0.91322 -0.0071748 9 0.88859 0.91565 -0.027067 1.6176e-01 5.4139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1985e-02 9.2575e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0129757 7.3869e-01 insignificant 1.0000000 insignificant chr7 2114149 2115149 74172 ENSG00000215135 0.87857 84 5 0.85821 100 5 0.81128 55 5 0.69799 111 5 0.60281 69 5 0.55447 159 5 0.52976 57 5 0.70294 150 5 0.65179 56 5 0.52004 50 4 0.78690 167 5 0.21429 24 3 0.45154 71 5 0.45617 64 5 0.78444 39 5 0.50000 28 2 0.00000 7 0 0.36833 107 5 0.89234 111 4 0.46059 95 5 0.72122 54 5 0.44048 47 4 0.46229 66 5 0.63528 47 3 0.65833 74 5 0.42853 138 5 0.56160 97 5 0.38571 35 4 0.54109 150 5 0.66017 169 5 0.35886 125 5 0.93526 152 5 0.954667 104 5 0.882479 91 5 1.00000 148 5 0.44444 21 1 0.600529 91 7 0.46254 202 5 0.20230 148 5 0.45968 121 5 0.20746 111 5 0.56818 19 2 0.14317 79 2 0.88128 0.80477 0.82550 0.68550 0.81082 0.62472 0.77315 0.84733 0.86979 0.75681 0.88221 0.22222 0.82554 0.81049 0.78858 0.81944 NA 0.65997 0.89821 0.56909 0.94463 0.59325 0.82416 0.65930 0.72801 0.61519 0.87201 0.51984 0.75492 0.67641 0.70964 0.92432 0.953704 0.9861111 1.00000 0.70394 0.93981 0.465711 0.15088 0.50424 0.26419 0.39370 0.20352 1 0.75733 0.70451 0.0385292 5 0.47247 0.44625 0.0262259 0.12298 0.80274231 insignificant 1 1.00000 insignificant 0.31713 0.85796970 insignificant 1 1.00000 insignificant 0.02038873 0.7743296 lowCoverage 1 lowCoverage 0.75733 0.79452 -0.024201 5 0.47247 0.53670 -0.06422485 7.8921e-01 9.7398e-02 insignificant 1.0000e+00 1.000000 insignificant 9.9983e-01 0.0035913 weaklyHypometh 1.0000e+00 0.89781 insignificant -0.1379864 2.6535e-01 lowCoverage 1.0000e+00 lowCoverage 0.75733 0.37448 0.4538658 5 0.47247 0.29077 0.181707 6.0901e-18 1.4528e-01 hypermethylated 2.0300e-15 1.0000000 hypermethylated 1.0119e-06 8.8100e-01 hypermethylated 2.8870e-04 1.000000 hypermethylated 0.2699662 2.6705e-02 lowCoverage 1.00000 lowCoverage 0.70451 0.79452 -0.089698 5 0.44625 0.53670 -0.0904507 9.4038e-01 0.109833 insignificant 1.0000e+00 1 insignificant 9.9999e-01 0.010383 weaklyHypometh 1.0000e+00 1 insignificant -0.1583752 2.0349e-01 lowCoverage 1.0000e+00 lowCoverage 0.70451 0.37448 0.4351147 5 0.44625 0.29077 0.1554810 9.6206e-12 0.402739 hypermethylated 2.4051e-09 1 hypermethylated 1.2623e-06 0.867716 hypermethylated 4.2075e-04 1 hypermethylated 0.2495774 3.6453e-02 lowCoverage 1.000000 lowCoverage 0.79452 0.37448 0.4591479 5 0.53670 0.29077 0.245932 2.0053e-07 9.9992e-01 hypermethylated 1.0026e-04 1.0000e+00 hypermethylated 5.8082e-05 9.9929e-01 hypermethylated 2.9041e-02 1.0000e+00 hypermethylated 0.4079526 1.3167e-02 lowCoverage 0.5415107 lowCoverage chr7 2198539 2199539 74175 ENSG00000215135 0.93676 286 7 0.77375 235 7 0.78543 117 7 0.84107 199 7 0.90488 95 7 0.88867 364 7 0.91385 153 7 0.92425 130 7 0.85101 102 7 0.77290 75 5 0.91008 310 7 0.75417 51 3 0.94449 90 7 0.96429 57 5 0.94206 114 7 0.91770 57 7 1.00000 3 0 0.68575 256 7 0.92509 188 7 0.86373 194 7 0.77679 58 5 0.92885 89 5 0.86198 151 7 0.58546 82 5 0.95617 88 5 0.88247 232 7 0.88421 99 6 0.82018 48 3 0.88355 214 7 0.83233 245 7 0.85910 216 7 0.91404 250 7 0.740765 195 7 0.683117 119 5 0.77857 317 5 0.40625 13 1 0.777409 137 7 0.43558 296 7 0.70936 182 7 0.75238 195 7 0.77143 159 7 0.89329 252 7 0.72796 210 7 0.92776 0.68237 0.79774 0.84572 0.88303 0.89493 0.89352 0.92568 0.82650 0.91516 0.89509 0.90188 0.94390 0.93269 0.93561 0.90355 0.92493 0.84833 0.92620 0.87496 0.88608 0.87456 0.86175 0.67271 0.93462 0.88907 0.86883 0.94296 0.88302 0.79540 0.83366 0.93246 0.793357 0.7124942 0.72564 0.66055 0.75815 0.307419 0.68032 0.76303 0.79676 0.87570 0.69832 2 0.88622 0.87585 0.0033294 7 0.72728 0.68589 0.0413969 0.49586 0.59592939 insignificant 1 1.00000 insignificant 0.45191 0.90122679 insignificant 1 1.00000 insignificant 0.02623673 0.4396063 insignificant 1 insignificant 0.88733 0.65520 0.228946 7 0.88746 0.63642 0.25104447 5.8239e-20 2.6413e-01 hypermethylated 5.8239e-18 1.000000 hypermethylated 6.3374e-05 0.3959401 hypermethylated 3.9609e-03 1.00000 hypermethylated 0.2380487 1.7764e-02 weaklyHypermeth 6.3442e-01 insignificant 0.88733 0.73246 0.1312319 7 0.88746 0.76027 0.127192 9.0914e-12 4.3637e-01 weaklyHypermeth 1.8183e-09 1.0000000 weaklyHypermeth 1.1415e-04 8.3639e-01 weaklyHypermeth 1.9025e-02 1.000000 weaklyHypermeth 0.1041123 2.7256e-02 weaklyHypermeth 1.00000 insignificant 0.87733 0.65520 0.260958 7 0.88185 0.63642 0.2454390 1.1520e-11 0.726113 hypermethylated 6.0630e-10 1 hypermethylated 2.2118e-03 0.670355 weaklyHypermeth 7.1349e-02 1 weaklyHypermeth 0.2118120 2.7398e-02 weaklyHypermeth 8.5619e-01 insignificant 0.87733 0.73246 0.1496787 7 0.88185 0.76027 0.1215867 8.3297e-07 0.896962 weaklyHypermeth 1.0412e-04 1 weaklyHypermeth 6.8259e-03 0.940895 weaklyHypermeth 5.4625e-01 1 insignificant 0.0778756 9.7560e-02 insignificant 1.000000 insignificant 0.65520 0.73246 -0.1515010 7 0.63642 0.76027 -0.123852 9.5659e-01 5.2622e-03 weaklyHypometh 1.0000e+00 1.3493e-01 insignificant 6.3369e-01 3.0565e-02 weaklyHypometh 1.0000e+00 8.7329e-01 insignificant -0.1339364 1.2569e-01 insignificant 1.0000000 insignificant chr7 2481392 2482392 74177 ENSG00000175873 0.87292 537 19 0.78220 437 18 0.80813 469 18 0.89872 436 18 0.83331 376 15 0.86720 773 23 0.86616 473 16 0.92934 563 19 0.82670 448 19 0.91752 597 19 0.88251 616 19 0.76744 260 12 0.87697 517 19 0.93630 325 16 0.79687 525 20 0.74777 289 11 0.55090 100 4 0.80616 812 21 0.87632 603 20 0.86571 428 18 0.79995 237 18 0.80890 280 15 0.85120 402 17 0.68545 307 12 0.83630 416 16 0.88004 536 21 0.84348 362 17 0.61928 200 15 0.83037 391 18 0.90138 539 22 0.91460 502 22 0.82792 511 21 0.787245 404 19 0.796388 405 18 0.82868 323 12 0.87581 126 7 0.842515 466 20 0.85923 407 20 0.82142 443 17 0.83613 526 20 0.78580 363 16 0.86362 679 18 0.83179 463 20 0.93026 0.82436 0.88015 0.93785 0.86789 0.87126 0.88873 0.92679 0.86961 0.92088 0.91883 0.89762 0.90714 0.91545 0.85573 0.80619 0.80213 0.86842 0.89613 0.89754 0.84732 0.84838 0.92262 0.81853 0.86456 0.89517 0.89229 0.81386 0.87456 0.88094 0.91636 0.87340 0.769734 0.8336961 0.91181 0.83733 0.88070 0.891729 0.88137 0.80504 0.79451 0.83992 0.88078 9 0.88898 0.87593 0.0060570 19 0.84368 0.80492 0.0387667 0.56505 0.88339839 insignificant 1 1.00000 insignificant 0.32732 0.92201766 insignificant 1 1.00000 insignificant 0.01888666 0.5502745 insignificant 1 insignificant 0.88905 0.83623 0.043735 18 0.87275 0.82016 0.05259166 1.2481e-04 9.4780e-01 weaklyHypermeth 3.2003e-03 1.000000 weaklyHypermeth 6.7722e-01 0.3811065 insignificant 1.0000e+00 1.00000 insignificant 0.0038142 8.7428e-01 insignificant 1.0000e+00 insignificant 0.88896 0.84640 0.0495295 16 0.83784 0.80370 0.034143 1.0014e-05 8.6600e-01 weaklyHypermeth 1.0404e-03 1.0000000 weaklyHypermeth 2.0097e-02 7.4278e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0077052 7.3986e-01 insignificant 1.00000 insignificant 0.87647 0.83623 0.039672 18 0.86386 0.82016 0.0437013 1.0971e-02 0.817480 weaklyHypermeth 2.3850e-01 1 insignificant 8.3920e-01 0.300897 insignificant 1.0000e+00 1 insignificant -0.0150724 6.0317e-01 insignificant 1.0000e+00 insignificant 0.87628 0.84640 0.0448629 16 0.82931 0.80370 0.0256081 8.7264e-03 0.905121 weaklyHypermeth 4.5786e-01 1 insignificant 3.1146e-01 0.838205 insignificant 1.0000e+00 1 insignificant -0.0111815 6.9165e-01 insignificant 1.000000 insignificant 0.83623 0.84674 0.0014316 19 0.82016 0.83719 -0.017026 1.0164e-01 2.2427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7095e-01 7.8050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0038909 8.4217e-01 insignificant 1.0000000 insignificant chr7 2510617 2511617 74178 ENSG00000175873 0.75947 257 9 0.64329 274 9 0.78194 293 9 0.79080 290 6 0.68475 220 9 0.82196 546 10 0.73620 232 8 0.70852 279 10 0.73380 224 8 0.74536 348 9 0.79450 371 9 0.68677 182 9 0.70803 245 8 0.67930 118 5 0.71679 286 8 0.68105 165 6 0.53215 118 6 0.79993 363 6 0.71825 205 8 0.75885 246 9 0.72736 162 11 0.68551 182 8 0.72100 235 8 0.60662 182 10 0.79015 138 8 0.73342 341 9 0.62714 258 10 0.67714 233 10 0.75042 290 9 0.86612 349 9 0.71184 168 8 0.80078 240 8 0.861511 197 9 0.781549 154 9 0.90854 326 9 0.62649 46 5 0.602831 230 10 0.74749 191 8 0.61709 299 8 0.83142 275 8 0.72282 247 6 0.53315 166 5 0.74657 240 6 0.87671 0.74482 0.83069 0.85441 0.83486 0.87480 0.88418 0.79869 0.78095 0.84198 0.84597 0.80326 0.84706 0.79155 0.85230 0.80777 0.78093 0.86049 0.82485 0.87086 0.77392 0.79059 0.83799 0.91624 0.82123 0.88922 0.77553 0.87550 0.82560 0.88168 0.87990 0.93965 0.840291 0.9345127 0.86318 0.88785 0.82097 0.863218 0.81850 0.86491 0.79846 0.76627 0.84928 5 0.83158 0.84178 -0.0094268 9 0.73609 0.67553 0.0605649 0.23497 0.04645506 weaklyHypometh 1 1.00000 insignificant 0.76951 0.06215353 insignificant 1 1.00000 insignificant -0.00070677 0.9782585 insignificant 1 insignificant 0.83168 0.86340 -0.054692 9 0.73609 0.78258 -0.04648875 6.7473e-01 4.5738e-05 weaklyHypometh 1.0000e+00 0.022869 weaklyHypometh 7.4262e-01 0.0010960 weaklyHypometh 1.0000e+00 0.74330 insignificant -0.0306488 5.7910e-01 insignificant 1.0000e+00 insignificant 0.83099 0.85282 0.0081604 8 0.70398 0.72693 -0.022950 2.9201e-02 4.9095e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 3.2268e-01 7.3249e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0338751 5.6053e-01 insignificant 1.00000 insignificant 0.84146 0.86252 -0.044181 9 0.70257 0.67570 0.0268675 9.5747e-01 0.020874 weaklyHypometh 1.0000e+00 1 insignificant 8.7919e-01 0.056485 insignificant 1.0000e+00 1 insignificant -0.0299420 5.9922e-01 insignificant 1.0000e+00 insignificant 0.84207 0.85243 0.0385357 8 0.70257 0.63591 0.0666598 1.6204e-04 0.903415 weaklyHypermeth 1.0127e-02 1 weaklyHypermeth 6.1516e-03 0.815517 weaklyHypermeth 5.4625e-01 1 insignificant 0.0345818 5.6309e-01 insignificant 1.000000 insignificant 0.86264 0.85207 0.0609956 8 0.71736 0.63591 0.081459 5.3303e-03 9.8838e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.6229e-01 9.8764e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0645238 3.9564e-01 insignificant 1.0000000 insignificant chr7 2515168 2516168 74179 ENSG00000175873 0.76764 497 16 0.64278 441 16 0.61573 275 13 0.72348 508 18 0.85927 170 9 0.81870 635 16 0.76200 252 12 0.81087 430 16 0.72074 284 11 0.80314 297 13 0.79748 580 18 0.87109 130 8 0.65971 376 11 0.77746 184 10 0.53389 276 13 0.79256 118 6 0.74811 49 4 0.70175 648 16 0.78929 544 16 0.70217 428 16 0.83985 185 13 0.67260 258 11 0.67188 332 16 0.76582 194 12 0.62392 615 17 0.67210 407 16 0.73903 313 14 0.74590 127 8 0.68813 458 16 0.65897 567 16 0.74529 450 16 0.88594 506 18 0.465039 397 16 0.562770 421 17 0.25871 325 5 0.59696 536 12 0.532515 396 17 0.53028 533 16 0.30918 494 16 0.39697 569 16 0.32598 404 16 0.59735 527 16 0.55137 343 16 0.69838 0.69821 0.76942 0.65259 0.80441 0.72691 0.81877 0.79210 0.77703 0.76172 0.80731 0.82042 0.64310 0.75740 0.58497 0.88264 0.76778 0.64509 0.71356 0.70718 0.84056 0.48333 0.76091 0.75070 0.70711 0.68208 0.81736 0.79005 0.75369 0.62581 0.69042 0.88417 0.653823 0.6746745 0.75721 0.74982 0.72475 0.626454 0.29140 0.37925 0.30550 0.54451 0.46277 7 0.73842 0.73190 0.0047085 16 0.74681 0.62481 0.1219996 0.50197 0.95940416 insignificant 1 1.00000 insignificant 0.54454 0.98113573 insignificant 1 1.00000 insignificant 0.01910945 0.5194705 insignificant 1 insignificant 0.73841 0.42638 0.169528 16 0.73929 0.49060 0.24869345 8.6568e-33 4.0705e-01 weaklyHypermeth 1.4428e-30 1.000000 weaklyHypermeth 2.2115e-08 0.4782820 weaklyHypermeth 2.2115e-06 1.00000 weaklyHypermeth 0.2538486 2.4893e-03 weaklyHypermeth 1.3830e-01 insignificant 0.73829 0.41249 0.3265071 16 0.71685 0.41229 0.304559 2.3217e-44 1.0000e+00 hypermethylated 2.3217e-41 1.0000000 hypermethylated 2.9312e-24 1.0000e+00 hypermethylated 2.9312e-21 1.000000 hypermethylated 0.3087246 4.4449e-03 weaklyHypermeth 0.62486 insignificant 0.73194 0.42638 0.173880 16 0.63567 0.49060 0.1450707 4.3424e-32 0.264969 weaklyHypermeth 8.6847e-30 1 weaklyHypermeth 1.1988e-06 0.357850 weaklyHypermeth 1.1988e-04 1 weaklyHypermeth 0.2347391 3.4463e-03 weaklyHypermeth 2.0272e-01 insignificant 0.73248 0.41249 0.3259284 16 0.69768 0.41229 0.2853929 8.0013e-36 1.000000 hypermethylated 8.0013e-33 1 hypermethylated 1.6080e-21 1.000000 hypermethylated 1.6080e-18 1 hypermethylated 0.2896151 5.2557e-03 weaklyHypermeth 0.901770 insignificant 0.42714 0.41249 0.0924602 16 0.53919 0.41229 0.126895 6.0206e-13 6.6949e-06 weaklyHypermeth 6.0206e-10 5.5791e-04 weaklyHypermeth 9.5362e-08 4.5850e-03 weaklyHypermeth 9.5362e-05 2.2925e-01 weaklyHypermeth 0.0548760 4.9545e-01 insignificant 1.0000000 insignificant chr7 2887936 2888936 74184 GNA12 ENSG00000146535 0.80266 109 3 0.79615 86 5 0.67104 93 5 0.89649 119 3 0.75159 82 5 0.74984 128 3 0.71264 91 5 0.84529 72 5 0.77262 97 5 0.67177 65 5 0.76015 97 5 0.73740 55 5 0.72818 105 5 0.68182 36 3 0.69072 92 5 0.60747 59 5 0.84314 60 5 0.85785 140 3 0.75947 75 5 0.78266 66 3 0.79150 93 5 0.80000 74 3 0.77857 91 5 0.81222 51 5 0.84982 49 3 0.72079 82 5 0.71319 76 5 0.76017 68 5 0.71097 59 4 0.71730 100 5 0.71364 81 5 0.85448 106 4 0.454167 78 5 0.336400 75 5 0.25000 59 4 0.73077 31 3 0.679994 91 5 0.64561 59 5 0.70823 122 3 0.77976 107 3 0.70683 105 3 0.57756 113 3 0.51884 122 5 0.73139 0.74441 0.66806 0.85024 0.67525 0.70410 0.68250 0.84535 0.65329 0.65823 0.68616 0.81670 0.71262 0.66517 0.61981 0.64152 0.80405 0.71558 0.68041 0.77665 0.67198 0.76758 0.75439 0.75423 0.78664 0.78028 0.65259 0.64728 0.72843 0.70022 0.72453 0.82279 0.468750 0.4825862 0.31922 0.61840 0.64450 0.468031 0.71807 0.78908 0.70003 0.72637 0.73045 3 0.72400 0.74624 -0.0124468 5 0.74840 0.76098 -0.0125718 0.49220 0.12402270 insignificant 1 1.00000 insignificant 0.37648 0.06404364 insignificant 1 1.00000 insignificant -0.01260638 0.5787844 lowCoverage 1 lowCoverage 0.72400 0.43766 0.289569 5 0.74840 0.47507 0.27333269 1.4629e-11 9.9881e-01 hypermethylated 6.9661e-10 1.000000 hypermethylated 8.2388e-04 0.9793336 hypermethylated 3.2955e-02 1.00000 hypermethylated 0.2397904 3.0677e-02 lowCoverage 9.8956e-01 lowCoverage 0.72480 0.69069 -0.0091763 3 0.82029 0.63812 0.182170 8.7201e-03 1.7157e-01 lowCoverage 5.4500e-01 1.0000000 lowCoverage 1.1119e-01 2.0968e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0977028 1.1077e-01 lowCoverage 1.00000 lowCoverage 0.74624 0.43766 0.291538 5 0.76098 0.47507 0.2859045 1.4629e-07 0.999998 hypermethylated 5.6266e-06 1 hypermethylated 1.5828e-03 0.999479 weaklyHypermeth 6.1491e-02 1 weaklyHypermeth 0.2523968 2.5560e-02 lowCoverage 8.2451e-01 lowCoverage 0.74624 0.69945 -0.0136303 3 0.76098 0.71337 0.0476100 3.8708e-01 0.487161 lowCoverage 1.0000e+00 1 lowCoverage 3.3381e-01 0.713708 lowCoverage 1.0000e+00 1 lowCoverage 0.1103091 8.0763e-02 lowCoverage 1.000000 lowCoverage 0.43766 0.69945 -0.2731723 3 0.47507 0.71337 -0.238294 9.9949e-01 8.3770e-04 lowCoverage 1.0000e+00 2.7023e-02 lowCoverage 9.3345e-01 4.6236e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1420877 1.6957e-01 lowCoverage 1.0000000 lowCoverage chr7 3107729 3108729 74189 CARD11 ENSG00000198286 0.91213 116 6 0.92746 283 9 0.87654 41 5 0.93394 154 8 0.86591 104 9 0.91679 223 9 0.88312 101 6 0.95972 99 8 1.00000 32 1 0.92857 17 0 0.95726 353 9 0.88889 12 0 1.00000 36 3 0.92430 48 3 0.98214 44 3 0.75000 5 0 1.00000 2 0 0.78863 97 4 0.88095 29 1 0.91578 136 7 0.77222 33 3 1.00000 18 0 0.98155 65 3 0.97959 36 4 0.89247 89 4 0.97688 241 9 0.94785 70 7 0.70370 13 0 0.90000 29 4 0.96072 221 9 0.97627 238 9 0.92993 267 9 0.731333 83 7 0.483516 47 3 0.39330 50 5 0.40000 16 0 0.537466 132 9 0.64753 161 9 0.93448 203 9 0.95297 246 9 0.95897 250 9 1.00000 21 3 0.94321 210 8 0.92418 0.90753 0.69444 0.95437 0.93333 0.91607 0.89196 0.96906 1.00000 0.98750 0.95553 0.87500 1.00000 0.81264 0.96330 0.98295 NA 0.88915 0.85417 0.92438 0.90833 1.00000 0.96448 0.98214 0.94343 0.96786 0.87094 0.89167 0.85750 0.93183 0.96947 0.90724 0.744872 0.6807692 0.29335 0.35606 0.62005 0.714912 0.94059 0.98424 0.94076 0.99347 0.96881 0 0.92288 0.94537 -0.0215248 6 0.84416 0.77746 0.0667034 0.99995 0.10665561 insignificant 1 1.00000 insignificant 0.98380 0.56381298 insignificant 1 1.00000 insignificant -0.00382533 0.9006570 lowCoverage 1 lowCoverage 0.92376 0.62372 0.296189 6 0.92064 0.58937 0.33126783 2.1185e-26 1.0000e+00 hypermethylated 3.0265e-24 1.000000 hypermethylated 4.9273e-13 1.0000000 hypermethylated 8.2121e-11 1.00000 hypermethylated 0.3824157 6.7265e-04 lowCoverage 4.2040e-02 lowCoverage 0.92376 0.94301 -0.0308250 6 0.92064 0.94688 -0.026239 8.0438e-01 2.7714e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 2.9113e-01 2.7150e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0433190 3.0597e-02 lowCoverage 1.00000 lowCoverage 0.94753 0.62372 0.320993 6 0.95022 0.58937 0.3608525 9.6831e-22 1.000000 hypermethylated 1.3833e-19 1 hypermethylated 2.7622e-12 1.000000 hypermethylated 4.6036e-10 1 hypermethylated 0.3862410 3.3156e-04 hypermethylated 3.0142e-02 hypermethylated 0.94753 0.94301 -0.0103171 6 0.95022 0.94688 0.0033455 2.4901e-01 0.240721 insignificant 1.0000e+00 1 insignificant 2.1506e-01 0.678636 insignificant 1.0000e+00 1 insignificant -0.0394937 1.9143e-01 insignificant 1.000000 insignificant 0.62372 0.94301 -0.3250190 6 0.58937 0.94688 -0.357507 1.0000e+00 3.1252e-10 hypomethylated 1.0000e+00 5.2087e-08 hypomethylated 1.0000e+00 1.9700e-08 hypomethylated 1.0000e+00 4.9251e-06 hypomethylated -0.4257347 4.5896e-04 hypomethylated 0.0764932 hypomethylated chr7 3732934 3733934 74230 ENSG00000211544 0.80653 112 6 0.65741 53 5 0.54286 19 3 0.82370 119 5 0.66667 3 0 0.68203 188 6 0.60000 9 0 0.76685 73 5 0.67857 21 2 0.88222 54 3 0.71679 123 5 1.00000 5 0 0.67500 71 5 NA 0 0 0.79167 33 3 0.50000 2 0 0.75000 4 0 0.67243 123 5 0.67340 48 5 0.76852 154 5 0.54911 50 4 0.78689 95 5 0.70741 70 6 0.60122 48 5 0.82659 72 3 0.73189 118 5 0.63717 54 3 0.43333 8 0 0.75721 72 5 0.76999 96 5 0.79295 120 5 0.73389 173 5 0.601190 80 6 0.648743 42 5 0.94487 38 3 0.56000 15 1 0.706349 29 3 0.65695 91 5 0.67138 75 6 0.72821 98 5 0.78472 75 5 0.76576 72 5 0.70509 142 5 0.82498 0.78889 0.54286 0.82370 0.85274 0.75844 0.60000 0.76685 0.71429 0.88222 0.86015 1.00000 0.81000 NA 0.79167 0.71169 0.94566 0.80692 0.80808 0.78889 0.65893 0.78689 0.84889 0.72146 0.89190 0.74493 0.76461 0.43333 0.90866 0.82399 0.85155 0.81400 0.721429 0.7784921 0.93385 0.56000 0.84762 0.788334 0.72565 0.87385 0.94167 0.81891 0.84611 0 0.80313 0.81250 -0.0050656 5 0.72020 0.70778 0.0124233 0.37895 0.28806078 insignificant 1 1.00000 insignificant 0.18382 0.78601682 insignificant 1 1.00000 insignificant 0.02469373 0.5711544 lowCoverage 1 lowCoverage 0.80313 0.77288 0.020483 5 0.72020 0.66164 0.05856238 1.3508e-01 8.3061e-01 insignificant 1.0000e+00 1.000000 insignificant 6.8570e-01 0.7509264 insignificant 1.0000e+00 1.00000 insignificant 0.0323153 6.1554e-01 lowCoverage 1.0000e+00 lowCoverage 0.80313 0.84632 -0.0553197 5 0.72020 0.75177 -0.031567 9.6791e-01 6.1808e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.6591e-01 3.4789e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0123660 7.1731e-01 lowCoverage 1.00000 lowCoverage 0.81250 0.77288 0.025668 5 0.70778 0.66164 0.0461391 1.3192e-01 0.789748 insignificant 1.0000e+00 1 insignificant 7.4754e-01 0.475972 insignificant 1.0000e+00 1 insignificant 0.0076215 9.0929e-01 lowCoverage 1.0000e+00 lowCoverage 0.81250 0.84632 -0.0506050 5 0.70778 0.75177 -0.0439903 9.8048e-01 0.057762 insignificant 1.0000e+00 1 insignificant 9.6956e-01 0.093442 insignificant 1.0000e+00 1 insignificant -0.0370598 3.6159e-01 lowCoverage 1.000000 lowCoverage 0.77288 0.84632 -0.0756705 5 0.66164 0.75177 -0.090129 9.9684e-01 4.9590e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6439e-01 3.4838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0446813 4.7784e-01 lowCoverage 1.0000000 lowCoverage chr7 3977515 3978515 74246 ENSG00000211544 0.91009 165 5 0.71861 236 8 0.79073 159 8 0.82077 114 8 0.86857 68 4 0.89567 249 8 0.82336 113 8 0.89300 118 7 0.85528 90 6 0.89107 83 5 0.76127 252 8 0.81020 85 6 0.89981 108 5 0.91667 26 4 0.85183 116 6 0.89876 60 3 0.60182 298 3 0.88597 107 5 0.88009 200 8 0.91632 273 8 0.88990 60 7 0.88514 80 5 0.82930 147 8 0.77828 87 8 0.82901 148 6 0.86550 225 8 0.71776 106 5 0.86090 90 6 0.84436 183 8 0.86553 247 8 0.94331 211 6 0.88919 274 8 0.717371 171 8 0.644466 124 6 0.65445 160 8 0.62265 133 6 0.582782 246 8 0.78782 225 8 0.90684 208 8 0.86364 140 5 0.83333 133 8 0.85064 118 3 0.84457 141 8 0.84772 0.71479 0.72972 0.85846 0.81568 0.83634 0.73864 0.82691 0.82353 0.85464 0.82443 0.89771 0.82990 0.83040 0.83511 0.83495 0.65611 0.87431 0.83242 0.87683 0.84625 0.86867 0.85037 0.85646 0.76199 0.82959 0.74340 0.86557 0.83820 0.84196 0.90069 0.86726 0.588073 0.6347253 0.57490 0.64857 0.70279 0.718108 0.87166 0.86718 0.87734 0.79853 0.86482 3 0.83733 0.86491 -0.0255106 8 0.86166 0.87607 -0.0144064 0.85334 0.04946043 weaklyHypometh 1 1.00000 insignificant 0.53344 0.53646837 insignificant 1 1.00000 insignificant -0.00535344 0.8275811 insignificant 1 insignificant 0.83683 0.69122 0.159856 8 0.83092 0.65331 0.17760379 5.2778e-12 1.0000e+00 weaklyHypermeth 2.6389e-10 1.000000 weaklyHypermeth 8.2907e-09 1.0000000 weaklyHypermeth 9.2119e-07 1.00000 weaklyHypermeth 0.1762389 7.1538e-04 weaklyHypermeth 4.2081e-02 weaklyHypermeth 0.83712 0.87568 -0.0365095 8 0.84550 0.86801 -0.022515 9.6918e-01 1.1852e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7463e-01 2.3900e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0153108 4.9011e-01 insignificant 1.00000 insignificant 0.86454 0.69122 0.180663 8 0.84853 0.65331 0.1952117 1.8008e-13 1.000000 weaklyHypermeth 1.2863e-11 1 weaklyHypermeth 7.1953e-08 1.000000 weaklyHypermeth 7.9948e-06 1 weaklyHypermeth 0.1815923 6.5804e-04 weaklyHypermeth 4.3869e-02 weaklyHypermeth 0.86472 0.87568 -0.0113625 8 0.85459 0.86801 -0.0134207 8.8231e-01 0.498751 insignificant 1.0000e+00 1 insignificant 9.1648e-01 0.300023 insignificant 1.0000e+00 1 insignificant -0.0099574 6.4368e-01 insignificant 1.000000 insignificant 0.69158 0.87568 -0.1981612 8 0.67248 0.86801 -0.195534 1.0000e+00 2.4088e-07 weaklyHypometh 1.0000e+00 2.4088e-05 weaklyHypometh 9.9998e-01 1.4515e-05 weaklyHypometh 1.0000e+00 2.0735e-03 weaklyHypometh -0.1915497 7.1078e-04 weaklyHypometh 0.1015396 insignificant chr7 4234784 4235784 74250 SDK1 ENSG00000146555 0.71019 204 7 0.63018 195 7 0.89033 91 7 0.80788 167 7 0.67388 86 6 0.84492 258 7 0.67554 82 5 0.82563 155 7 0.74922 87 6 0.78869 90 5 0.85082 223 7 0.79185 40 5 0.90960 119 7 0.79562 32 4 0.86354 100 7 0.78333 22 1 0.87844 68 2 0.70951 250 8 0.87679 114 7 0.81826 206 7 0.86044 86 7 0.78519 58 5 0.71847 154 6 0.81845 93 7 0.73007 135 8 0.68936 201 7 0.74813 98 7 0.70643 53 4 0.83945 121 7 0.85903 200 7 0.82643 209 7 0.78159 255 7 0.645594 203 7 0.574028 122 7 0.69311 182 5 0.71190 44 5 0.603393 132 7 0.78382 179 7 0.66487 214 7 0.83260 235 7 0.79749 214 7 0.75947 219 7 0.83721 212 7 0.86682 0.74154 0.89661 0.84448 0.71868 0.87524 0.73385 0.85981 0.81744 0.86159 0.89476 0.80418 0.93477 0.78929 0.87635 0.87620 0.82958 0.83938 0.89274 0.83952 0.91918 0.77058 0.85806 0.87037 0.88508 0.83574 0.76779 0.80632 0.85002 0.90732 0.86714 0.83659 0.682048 0.6796276 0.76613 0.74232 0.76944 0.767064 0.78504 0.85209 0.83048 0.82736 0.86508 3 0.83708 0.84116 -0.0045052 7 0.77004 0.63016 0.1398786 0.63465 0.69433555 insignificant 1 1.00000 insignificant 0.71266 0.73606668 insignificant 1 1.00000 insignificant 0.01345883 0.5951469 insignificant 1 insignificant 0.83610 0.74478 0.094336 7 0.72559 0.65825 0.06733985 3.5684e-06 9.9336e-01 weaklyHypermeth 1.1151e-04 1.000000 weaklyHypermeth 2.6285e-04 0.9997880 weaklyHypermeth 1.1948e-02 1.00000 weaklyHypermeth 0.1250698 7.6781e-03 weaklyHypermeth 3.5201e-01 insignificant 0.83610 0.81353 0.0163299 7 0.72559 0.79586 -0.070269 4.0905e-01 4.4296e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.3568e-01 7.4734e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0153848 6.8481e-01 insignificant 1.00000 insignificant 0.84166 0.74448 0.096759 7 0.70893 0.61553 0.0933939 2.5622e-05 0.999998 weaklyHypermeth 8.0070e-04 1 weaklyHypermeth 1.7402e-03 0.999997 weaklyHypermeth 6.2149e-02 1 weaklyHypermeth 0.1116109 1.3968e-02 weaklyHypermeth 5.3723e-01 insignificant 0.84166 0.81336 0.0238999 7 0.70893 0.77034 -0.0614165 3.8015e-01 0.615700 insignificant 1.0000e+00 1 insignificant 3.6448e-01 0.750840 insignificant 1.0000e+00 1 insignificant 0.0019260 9.5913e-01 insignificant 1.000000 insignificant 0.74478 0.81353 -0.0612176 7 0.65825 0.79586 -0.137609 9.9361e-01 6.3189e-04 weaklyHypometh 1.0000e+00 2.4303e-02 weaklyHypometh 9.9566e-01 2.2718e-02 weaklyHypometh 1.0000e+00 6.8737e-01 insignificant -0.1096850 3.6338e-02 weaklyHypometh 1.0000000 insignificant chr7 5279997 5280997 74261 WIPI2 ENSG00000157954 0.86192 440 10 0.79001 523 13 0.63327 323 13 0.78575 356 9 0.76422 259 13 0.83963 810 10 0.76984 423 11 0.87311 381 13 0.74102 238 13 0.84571 322 12 0.82528 576 13 0.68139 113 8 0.77763 303 13 0.74922 169 7 0.78150 346 13 0.70040 170 11 1.00000 6 0 0.78570 769 9 0.84112 723 13 0.85394 631 9 0.83406 171 12 0.52024 106 5 0.74097 317 11 0.77534 172 10 0.85567 418 6 0.88634 587 13 0.71533 362 13 0.76943 160 11 0.88295 632 13 0.86052 542 13 0.86234 554 13 0.85151 472 9 0.288242 525 13 0.155936 707 13 0.25335 370 11 0.62470 139 4 0.194394 467 12 0.58925 617 13 0.72332 525 11 0.83482 555 11 0.72493 384 9 0.78531 601 9 0.69569 403 9 0.83578 0.79497 0.70595 0.82195 0.77528 0.87639 0.83993 0.83927 0.79365 0.89049 0.82182 0.76545 0.80896 0.87676 0.82603 0.90895 0.85630 0.80651 0.83602 0.86469 0.90065 0.83892 0.86503 0.88380 0.89810 0.87910 0.80720 0.82250 0.85510 0.84217 0.85942 0.86651 0.289625 0.1391665 0.25332 0.60054 0.16735 0.617969 0.80433 0.77921 0.76199 0.84426 0.76664 6 0.82608 0.85749 -0.0280298 13 0.70313 0.76327 -0.0601389 0.99661 0.00805269 weaklyHypometh 1 1.00000 insignificant 0.95181 0.02087522 weaklyHypometh 1 1.00000 insignificant -0.00119216 0.9730825 insignificant 1 insignificant 0.82608 0.30973 0.501117 13 0.70313 0.26888 0.43425347 8.7049e-72 1.0000e+00 hypermethylated 2.9016e-69 1.000000 hypermethylated 1.9244e-18 1.0000000 hypermethylated 6.4147e-16 1.00000 hypermethylated 0.4440540 2.6293e-03 weaklyHypermeth 1.3839e-01 insignificant 0.82660 0.78525 0.0380226 9 0.74708 0.77825 -0.031167 9.4918e-03 8.8508e-01 weaklyHypermeth 5.5834e-01 1.0000000 insignificant 2.1066e-02 7.6374e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0422209 2.0537e-01 insignificant 1.00000 insignificant 0.85749 0.30973 0.531963 13 0.76327 0.26888 0.4943923 1.2913e-52 1.000000 hypermethylated 4.3042e-50 1 hypermethylated 3.1790e-17 1.000000 hypermethylated 1.0597e-14 1 hypermethylated 0.4452461 2.0219e-03 weaklyHypermeth 1.2637e-01 insignificant 0.85845 0.78525 0.0652251 9 0.81098 0.77825 0.0327307 8.6490e-05 0.998688 weaklyHypermeth 6.1778e-03 1 weaklyHypermeth 6.0874e-03 0.994355 weaklyHypermeth 5.4625e-01 1 insignificant 0.0434130 2.8741e-01 insignificant 1.000000 insignificant 0.30995 0.78525 -0.4900912 9 0.28569 0.77825 -0.492561 1.0000e+00 9.6153e-20 hypomethylated 1.0000e+00 3.2051e-17 hypomethylated 1.0000e+00 1.0232e-10 hypomethylated 1.0000e+00 3.4107e-08 hypomethylated -0.4018331 3.7727e-03 weaklyHypometh 0.2515104 insignificant chr7 5402980 5403980 74263 TNRC18 ENSG00000182095 0.83117 307 11 0.81161 493 18 0.80103 592 19 0.89558 396 17 0.91938 321 15 0.84584 436 17 0.78368 502 13 0.91188 335 17 0.87662 394 17 0.91327 341 16 0.90119 503 18 0.83869 401 16 0.88845 381 18 0.95000 39 2 0.89997 388 14 0.85863 304 13 0.88890 237 13 0.92599 399 16 0.85642 428 18 0.86924 302 12 0.79807 176 16 0.87642 124 8 0.76259 340 17 0.88208 204 17 0.87121 96 9 0.93304 405 19 0.84817 236 16 0.76657 161 11 0.86127 373 17 0.95397 512 20 0.91318 437 19 0.89157 411 18 0.062776 657 19 0.012272 418 18 0.20399 617 17 0.55362 227 13 0.020939 221 17 0.10835 616 23 0.89752 270 13 0.92376 273 15 0.90188 260 6 0.86314 303 7 0.89589 359 14 0.83618 0.85035 0.83459 0.93816 0.89846 0.88089 0.88068 0.91332 0.94146 0.93400 0.89955 0.85185 0.88514 0.92376 0.90046 0.84465 0.86834 0.91343 0.91030 0.88952 0.88847 0.91622 0.89354 0.88537 0.92722 0.91362 0.89917 0.86908 0.88738 0.94673 0.90404 0.89071 0.045217 0.0079944 0.37862 0.56180 0.03373 0.074232 0.92657 0.92345 0.91238 0.89812 0.91810 6 0.89199 0.89583 -0.0122262 17 0.88076 0.85844 0.0223214 0.98084 0.06045565 insignificant 1 1.00000 insignificant 0.97327 0.23678480 insignificant 1 1.00000 insignificant 0.01019922 0.6202387 insignificant 1 insignificant 0.89196 0.12627 0.776737 17 0.87557 0.14454 0.73103379 1.6945e-219 1.0000e+00 hypermethylated 1.6945e-216 1.000000 hypermethylated 1.2293e-40 1.0000000 hypermethylated 1.2293e-37 1.00000 hypermethylated 0.7130535 3.2994e-04 hypermethylated 2.8137e-02 hypermethylated 0.89196 0.92218 -0.0256076 11 0.87557 0.90356 -0.027983 9.5526e-01 2.2388e-04 weaklyHypometh 1.0000e+00 0.0559699 weaklyHypometh 9.9989e-01 1.4242e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0230585 1.2008e-01 insignificant 1.00000 insignificant 0.89609 0.12627 0.782556 17 0.89576 0.14454 0.7512202 6.0234e-142 1.000000 hypermethylated 6.0234e-139 1 hypermethylated 9.6405e-35 1.000000 hypermethylated 9.6405e-32 1 hypermethylated 0.7028543 2.8608e-04 hypermethylated 2.8608e-02 hypermethylated 0.89609 0.92218 -0.0117306 11 0.89576 0.90356 -0.0077968 9.5015e-01 0.083124 insignificant 1.0000e+00 1 insignificant 9.9915e-01 0.124217 insignificant 1.0000e+00 1 insignificant -0.0332577 1.1910e-01 insignificant 1.000000 insignificant 0.12627 0.92218 -0.7936966 11 0.14454 0.90356 -0.759017 1.0000e+00 9.2652e-86 hypomethylated 1.0000e+00 9.2652e-83 hypomethylated 1.0000e+00 5.2509e-22 hypomethylated 1.0000e+00 5.2509e-19 hypomethylated -0.7361120 2.8444e-04 hypomethylated 0.0742409 hypomethylated chr7 5603625 5604625 74264 FSCN1 ENSG00000075618 0.64379 185 7 0.57136 86 4 0.57348 101 4 0.67441 107 7 0.75000 40 4 0.64942 284 9 0.70456 78 4 0.64730 59 4 0.50583 66 4 0.73852 77 4 0.70463 132 4 0.70725 75 4 0.65574 95 4 0.90000 10 1 0.68966 82 4 0.58430 44 4 0.49552 158 7 0.69087 123 7 0.63743 156 7 0.64411 196 7 0.72326 35 3 0.80164 63 4 0.72151 133 7 0.84077 51 4 0.73958 24 3 0.70238 192 7 0.83333 45 2 0.74167 37 3 0.61207 64 4 0.57560 192 7 0.70583 171 7 0.61309 278 7 0.541477 96 4 0.519792 60 4 0.58140 154 9 0.58294 58 4 0.544565 64 4 0.56056 197 7 0.64620 204 7 0.78527 168 7 0.63118 183 7 0.50369 157 7 0.77031 187 7 0.75276 0.67382 0.63619 0.79527 0.83848 0.70690 0.76486 0.71087 0.58600 0.80614 0.78372 0.75804 0.73883 0.75093 0.75643 0.68778 0.70040 0.75191 0.75925 0.78787 0.75746 0.84178 0.82815 0.88079 0.74508 0.76693 0.86891 0.81086 0.67841 0.74761 0.77839 0.79489 0.572134 0.5955758 0.69555 0.68013 0.61218 0.578003 0.81642 0.85708 0.77532 0.75851 0.82973 3 0.68617 0.74163 -0.0450417 4 0.64388 0.65343 -0.0095468 0.86114 0.00257133 lowCoverage 1 0.61271 lowCoverage 0.91193 0.00192287 lowCoverage 1 0.48072 lowCoverage -0.05915160 0.0740574 lowCoverage 1 lowCoverage 0.68617 0.59777 0.105301 4 0.64388 0.54056 0.10332083 2.2644e-07 8.1967e-01 lowCoverage 7.8082e-06 1.000000 lowCoverage 1.5235e-03 0.6362915 lowCoverage 5.6424e-02 1.00000 lowCoverage 0.1032869 1.1561e-04 weaklyHypermeth 1.1561e-02 weaklyHypermeth 0.68617 0.71079 -0.0685921 4 0.64388 0.68817 -0.044292 9.7928e-01 9.2236e-03 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.7589e-01 8.2514e-03 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0089206 8.7779e-01 insignificant 1.00000 insignificant 0.74163 0.59777 0.149487 6 0.65343 0.54056 0.1128676 7.0576e-09 0.800664 weaklyHypermeth 3.0685e-07 1 weaklyHypermeth 4.8610e-05 0.876479 weaklyHypermeth 3.0381e-03 1 weaklyHypermeth 0.1624385 2.4994e-05 lowCoverage 4.1657e-03 lowCoverage 0.74163 0.71079 -0.0206270 7 0.65343 0.68817 -0.0347456 7.1084e-01 0.276639 insignificant 1.0000e+00 1 insignificant 7.5557e-01 0.430307 insignificant 1.0000e+00 1 insignificant 0.0502310 4.1289e-01 lowCoverage 1.000000 lowCoverage 0.59777 0.71079 -0.1708071 6 0.54056 0.68817 -0.147613 8.6313e-01 1.1048e-06 weaklyHypometh 1.0000e+00 1.0044e-04 weaklyHypometh 9.5668e-01 1.5823e-03 weaklyHypometh 1.0000e+00 1.3185e-01 insignificant -0.1122075 9.4378e-02 insignificant 1.0000000 insignificant chr7 8715967 8716967 74444 NXPH1 ENSG00000122584 0.90460 254 9 0.80634 246 9 0.84786 111 9 0.86035 78 6 0.85714 71 6 0.86229 197 9 0.88879 77 8 0.86331 134 9 0.79545 75 7 0.80198 115 9 0.87645 344 9 0.81888 59 8 0.94533 219 7 NA 0 0 0.79125 113 8 0.89630 26 1 0.87630 44 4 0.77958 85 6 0.85671 181 9 0.92678 199 9 0.81706 66 5 0.91780 34 2 0.87767 164 9 0.83081 58 5 0.96429 29 3 0.93225 292 8 0.91667 68 4 0.87500 39 3 0.85052 175 7 0.91693 287 9 0.83986 337 9 0.88816 362 9 0.815517 246 7 0.774511 226 9 0.84011 175 9 0.95815 34 4 0.940741 44 3 0.87445 317 9 0.95151 163 9 0.89526 227 9 0.91599 115 7 0.94078 127 6 0.92340 131 7 0.89268 0.79295 0.83744 0.84441 0.82605 0.86268 0.90913 0.88914 0.74894 0.82600 0.87163 0.82610 0.93823 NA 0.77473 0.95117 0.93411 0.75083 0.84686 0.91796 0.80432 0.91202 0.87168 0.87478 0.90639 0.89146 0.89310 0.90127 0.85837 0.87734 0.83747 0.87790 0.739845 0.6802138 0.81166 0.88843 0.92781 0.838124 0.95764 0.90397 0.88642 0.91371 0.90612 2 0.86834 0.91052 -0.0278673 9 0.86271 0.89462 -0.0319048 0.97497 0.00306354 weaklyHypometh 1 0.61271 insignificant 0.95237 0.04115309 weaklyHypometh 1 1.00000 insignificant -0.03002035 0.0886975 insignificant 1 insignificant 0.86834 0.86564 0.023391 9 0.86271 0.86223 0.00048671 3.2365e-02 1.3128e-01 weaklyHypermeth 6.4729e-01 1.000000 insignificant 5.5924e-02 0.2003719 insignificant 1.0000e+00 1.00000 insignificant -0.0116832 7.2011e-01 insignificant 1.0000e+00 insignificant 0.86834 0.89777 -0.0641951 9 0.86271 0.92374 -0.061030 9.9999e-01 2.2368e-05 weaklyHypometh 1.0000e+00 0.0074562 weaklyHypometh 1.0000e+00 3.6893e-05 weaklyHypometh 1.0000e+00 0.036893 weaklyHypometh -0.0698230 2.4685e-04 weaklyHypometh 0.07745 weaklyHypometh 0.91052 0.86564 0.050381 9 0.89462 0.86223 0.0323915 5.3478e-04 0.951461 weaklyHypermeth 1.4855e-02 1 weaklyHypermeth 2.9980e-02 0.943979 weaklyHypermeth 7.3122e-01 1 insignificant 0.0183371 5.8520e-01 insignificant 1.0000e+00 insignificant 0.91052 0.89777 -0.0327352 9 0.89462 0.92374 -0.0291254 9.9443e-01 0.012301 weaklyHypometh 1.0000e+00 1 insignificant 9.9306e-01 0.035088 weaklyHypometh 1.0000e+00 1 insignificant -0.0398027 2.8387e-02 weaklyHypometh 1.000000 insignificant 0.86564 0.89777 -0.0866002 9 0.86223 0.92374 -0.061517 9.8348e-01 1.0470e-05 weaklyHypometh 1.0000e+00 8.0537e-04 weaklyHypometh 9.5078e-01 9.8427e-04 weaklyHypometh 1.0000e+00 8.9479e-02 weaklyHypometh -0.0581398 1.0805e-01 insignificant 1.0000000 insignificant chr7 9327307 9328307 74505 ENSG00000220953 0.90235 328 14 0.87148 346 13 0.69826 96 9 0.87759 169 12 0.82475 166 14 0.84721 307 14 0.78325 128 10 0.89979 223 13 0.80914 131 14 0.84233 161 11 0.87879 442 14 0.85961 74 10 0.84032 330 14 0.85000 27 4 0.89899 184 14 0.71085 78 4 0.66510 155 10 0.91324 146 11 0.87792 241 12 0.86169 335 14 0.89609 103 9 0.82114 102 8 0.84229 240 11 0.76363 121 11 0.81859 61 5 0.87757 448 14 0.87378 168 13 0.87446 61 6 0.87207 233 11 0.91365 427 14 0.88345 413 14 0.84757 536 14 0.734627 310 12 0.614661 202 12 0.84197 315 14 0.79945 63 6 0.855442 94 8 0.82971 440 14 0.88794 259 14 0.88621 324 14 0.87207 226 12 0.77740 176 10 0.88863 284 10 0.89331 0.85882 0.61097 0.86149 0.80706 0.82331 0.83088 0.88129 0.79227 0.81807 0.85863 0.85963 0.82113 0.83444 0.86841 0.68124 0.69785 0.92418 0.87374 0.84972 0.85948 0.84563 0.83146 0.72029 0.82237 0.87054 0.87197 0.84507 0.82990 0.90499 0.88863 0.83757 0.727878 0.6675390 0.82139 0.82470 0.88056 0.820039 0.85332 0.87708 0.87429 0.77218 0.86842 4 0.85690 0.87779 -0.0094084 14 0.85299 0.86108 -0.0080826 0.92232 0.47352224 insignificant 1 1.00000 insignificant 0.84010 0.26373109 insignificant 1 1.00000 insignificant -0.02139303 0.2856879 insignificant 1 insignificant 0.85690 0.82935 0.045132 14 0.85299 0.81230 0.04069645 8.6308e-05 9.4302e-01 weaklyHypermeth 2.2713e-03 1.000000 weaklyHypermeth 3.6604e-03 0.9605797 weaklyHypermeth 1.1808e-01 1.00000 insignificant 0.0563224 2.0762e-01 insignificant 1.0000e+00 insignificant 0.85690 0.85343 -0.0207253 14 0.85299 0.87457 -0.021577 9.1949e-01 7.5972e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.1895e-01 2.3201e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0268168 3.4039e-01 insignificant 1.00000 insignificant 0.87779 0.82935 0.054930 14 0.86108 0.81230 0.0487791 9.5094e-06 0.998248 weaklyHypermeth 3.0676e-04 1 weaklyHypermeth 1.5988e-03 0.999601 weaklyHypermeth 6.1491e-02 1 weaklyHypermeth 0.0777154 9.4109e-02 insignificant 1.0000e+00 insignificant 0.87779 0.85343 -0.0095308 14 0.86108 0.87457 -0.0134939 8.6931e-01 0.357458 insignificant 1.0000e+00 1 insignificant 5.9362e-01 0.227745 insignificant 1.0000e+00 1 insignificant -0.0054238 8.3164e-01 insignificant 1.000000 insignificant 0.82935 0.85343 -0.0655097 14 0.81230 0.87457 -0.062273 9.9273e-01 3.3851e-05 weaklyHypometh 1.0000e+00 2.1157e-03 weaklyHypometh 9.9542e-01 2.6792e-03 weaklyHypometh 1.0000e+00 1.6579e-01 insignificant -0.0831392 9.0555e-02 insignificant 1.0000000 insignificant chr7 11826077 11827077 74710 ENSG00000220166 0.90064 142 5 0.89640 192 6 0.89638 180 6 0.98529 38 3 0.91845 164 6 0.93960 134 4 0.87030 166 6 0.88919 167 6 0.78915 143 6 0.96714 165 6 0.86527 180 6 0.87253 169 6 0.94846 141 6 NA 0 0 0.90157 161 6 0.81662 98 6 0.86046 151 6 0.61368 43 2 0.95032 84 5 0.82123 100 4 0.83333 44 5 0.87500 14 2 0.93146 116 6 0.97917 51 5 0.97222 15 1 0.93454 181 6 0.91628 55 5 0.90476 50 5 0.86081 124 5 0.95499 236 6 0.95517 182 6 0.88744 167 5 0.691084 225 6 0.659305 128 6 0.63339 213 5 0.87500 13 0 0.747757 118 6 0.82802 154 6 0.98958 81 4 0.97631 82 5 0.92667 44 3 0.91905 65 2 0.98851 71 3 0.91807 0.90871 0.89981 0.98157 0.93732 0.94173 0.85754 0.91903 0.90992 0.95541 0.92312 0.90405 0.96542 NA 0.89870 0.94461 0.87140 0.85219 0.96347 0.93118 0.60241 0.86718 0.93676 0.99849 0.94779 0.93397 0.93329 0.99799 0.89518 0.94174 0.97899 0.91021 0.798146 0.6560203 0.87250 0.90361 0.76525 0.949632 0.98795 0.98057 0.90361 0.92184 0.98886 2 0.87729 0.92874 -0.0417590 6 0.83092 0.94008 -0.1091609 0.98419 0.00020186 weaklyHypometh 1 0.10093 insignificant 0.98692 0.00029965 weaklyHypometh 1 0.27351 insignificant -0.03800923 0.1108402 lowCoverage 1 lowCoverage 0.87758 0.67685 0.200439 6 0.88607 0.71462 0.17145030 1.2025e-14 9.9999e-01 hypermethylated 8.5893e-13 1.000000 hypermethylated 7.5972e-05 0.9995945 hypermethylated 4.0711e-03 1.00000 hypermethylated 0.1399968 1.3581e-02 lowCoverage 5.0301e-01 lowCoverage 0.87758 0.96501 -0.0575120 3 0.88607 0.97229 -0.086212 9.9998e-01 1.9833e-05 lowCoverage 1.0000e+00 0.0074562 lowCoverage 9.9992e-01 2.0532e-04 lowCoverage 1.0000e+00 0.078334 lowCoverage -0.0809333 4.1346e-03 lowCoverage 0.62486 lowCoverage 0.92869 0.67685 0.220597 6 0.93009 0.71462 0.2154714 6.1004e-15 0.999852 hypermethylated 5.0837e-13 1 hypermethylated 1.6339e-05 0.998700 hypermethylated 1.0893e-03 1 hypermethylated 0.1780060 4.8131e-03 lowCoverage 2.4644e-01 lowCoverage 0.92869 0.96501 -0.0339397 3 0.93009 0.97229 -0.0421908 9.9848e-01 0.028600 lowCoverage 1.0000e+00 1 lowCoverage 9.9805e-01 0.028352 lowCoverage 1.0000e+00 1 lowCoverage -0.0429241 6.0597e-02 lowCoverage 1.000000 lowCoverage 0.67685 0.96501 -0.1831173 3 0.71462 0.97229 -0.257662 9.9999e-01 3.8248e-08 lowCoverage 1.0000e+00 4.7811e-06 lowCoverage 9.9998e-01 4.0019e-04 lowCoverage 1.0000e+00 4.4465e-02 lowCoverage -0.2209301 1.5463e-03 lowCoverage 0.1932873 lowCoverage chr7 14174492 14175492 74881 ENSG00000220499 0.84735 181 6 0.66646 102 5 0.45079 38 3 0.85824 151 6 0.84432 53 5 0.86726 90 6 0.78429 62 5 0.65034 66 5 0.54955 37 5 0.58750 33 5 0.74254 106 5 0.72917 31 4 0.83485 52 6 0.62153 59 6 0.83598 62 5 0.60000 25 3 0.52259 103 2 0.67976 162 7 0.86286 29 5 0.77698 52 4 0.59524 29 2 0.76667 17 0 0.78647 96 6 0.75000 31 2 0.81325 95 5 0.84943 82 6 0.67063 38 5 0.77778 16 0 0.50907 62 5 0.58631 81 5 0.73527 72 6 0.82953 79 4 0.724026 111 5 0.615947 82 5 0.67293 66 5 0.40000 5 0 0.519444 59 4 0.78328 78 6 0.72204 115 4 0.80733 161 6 0.82085 163 6 0.64766 106 4 0.76552 136 6 0.73675 0.59783 0.64835 0.82650 0.84646 0.83397 0.78650 0.64868 0.68995 0.53480 0.79443 0.69780 0.80320 0.80617 0.81345 0.61381 0.50088 0.79771 0.86499 0.77656 0.72527 0.77106 0.77050 0.69780 0.81833 0.87950 0.81024 0.72527 0.73574 0.73587 0.77613 0.74444 0.686028 0.6616109 0.75860 0.45055 0.57839 0.826572 0.72812 0.77818 0.79449 0.70892 0.79824 0 0.77041 0.78797 -0.0188628 5 0.64110 0.72882 -0.0877228 0.74939 0.58501619 insignificant 1 1.00000 insignificant 0.88361 0.31178973 insignificant 1 1.00000 insignificant -0.00685321 0.8733883 lowCoverage 1 lowCoverage 0.77093 0.68579 0.070171 5 0.71233 0.65293 0.05939832 3.2707e-03 9.8545e-01 weaklyHypermeth 7.6063e-02 1.000000 weaklyHypermeth 9.2492e-02 0.9682710 insignificant 1.0000e+00 1.00000 insignificant 0.0963468 1.7356e-01 lowCoverage 1.0000e+00 lowCoverage 0.77093 0.81938 -0.0329808 5 0.71233 0.75453 -0.042194 9.3245e-01 1.6957e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.4944e-01 4.6321e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0370620 4.0306e-01 lowCoverage 1.00000 lowCoverage 0.78736 0.68579 0.084701 5 0.69869 0.65293 0.0457570 1.6865e-02 0.980992 weaklyHypermeth 3.3069e-01 1 insignificant 7.7912e-02 0.965783 insignificant 1.0000e+00 1 insignificant 0.1032000 1.5253e-01 lowCoverage 1.0000e+00 lowCoverage 0.78736 0.81938 -0.0156755 5 0.69869 0.75453 -0.0558353 9.2027e-01 0.442673 insignificant 1.0000e+00 1 insignificant 8.3328e-01 0.689584 insignificant 1.0000e+00 1 insignificant -0.0302088 5.0878e-01 lowCoverage 1.000000 lowCoverage 0.68579 0.81938 -0.1002885 5 0.65293 0.75453 -0.101592 9.8414e-01 1.9932e-02 weaklyHypometh 1.0000e+00 4.7457e-01 insignificant 9.9668e-01 2.2795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1334089 7.7695e-02 lowCoverage 1.0000000 lowCoverage chr7 16484794 16485794 75111 SOSTDC1 ENSG00000171243 0.72044 181 8 0.60669 138 8 0.68041 70 8 0.68865 181 7 0.66272 98 8 0.81663 198 8 0.64960 78 8 0.68990 100 8 0.71680 58 8 0.76778 99 8 0.56850 216 8 0.77500 41 6 0.79907 158 8 0.77557 87 8 0.65159 104 8 0.77083 31 4 NA 0 0 0.76164 251 10 0.71956 132 8 0.77812 100 5 0.74062 46 7 0.88831 55 4 0.78704 137 7 0.59102 55 7 0.88894 134 7 0.59913 149 6 0.71409 51 5 0.88542 27 2 0.70844 168 8 0.68978 169 8 0.68700 122 8 0.66119 100 4 0.74357 138 8 0.71178 98 8 0.58152 140 8 0.81250 28 4 0.59665 89 8 0.73977 135 8 0.71007 120 8 0.75084 169 7 0.76301 242 7 0.75000 137 3 0.81267 202 7 0.70358 0.58969 0.69133 0.69821 0.66877 0.79919 0.67496 0.69916 0.71690 0.70952 0.65842 0.77000 0.80284 0.79957 0.72721 0.72381 NA 0.73473 0.74638 0.76786 0.76429 0.89191 0.76603 0.55612 0.88893 0.63532 0.71456 0.85714 0.74206 0.76444 0.70539 0.73687 0.68041 0.71187 0.59093 0.74286 0.58714 0.75359 0.67587 0.74719 0.74693 0.68571 0.79001 3 0.71669 0.75021 -0.0327322 8 0.71795 0.69478 0.0231707 0.737588 0.070254 insignificant 1 1 insignificant 0.78950 0.060036 insignificant 1 1 insignificant -0.0209864 0.548299 insignificant 1 insignificant 0.71669 0.67197 0.043858 8 0.71795 0.73558 -0.017630 5.6294e-02 0.76231 insignificant 1.0000e+00 1 insignificant 0.26779685 0.51403 insignificant 1.0000000 1 insignificant 0.0181310 0.665209 insignificant 1 insignificant 0.71664 0.76667 -0.032486 7 0.71689 0.76528 -0.048396 0.7882925 9.1475e-04 weaklyHypometh 1.00000 0.457373 insignificant 0.49963 0.01615602 weaklyHypometh 1 1.00000 insignificant -0.041552 0.0916529 insignificant 1 insignificant 0.75021 0.67197 0.0761852 8 0.69478 0.73558 -0.0408004 3.3341e-02 0.98005 weaklyHypermeth 1.00000000 1 insignificant 0.19838858 0.95802 insignificant 1.000000 1 insignificant 0.039117 0.430508 insignificant 1 insignificant 0.75103 0.76667 0.0014787 7 0.74348 0.76528 -0.021804 0.35367 0.168536 insignificant 1 1 insignificant 0.17370 0.434380 insignificant 1 1 insignificant -0.020566 0.561719 insignificant 1 insignificant 0.67093 0.76667 -0.083579 7 0.66948 0.76528 -0.095803 0.99840 2.4855e-04 weaklyHypometh 1 0.02071236 weaklyHypometh 0.98830 0.06063581 insignificant 1 1.000000 insignificant -0.059683 0.1845751 insignificant 1 insignificant chr7 16855412 16856412 75127 AGR2 ENSG00000106541 0.87613 74 5 0.88175 44 5 0.89242 106 5 0.93333 20 1 0.90932 84 5 0.81548 207 5 0.89857 160 5 0.86250 45 5 0.71640 52 4 0.93739 77 5 0.92597 176 5 0.98000 131 5 0.89901 107 5 NA 0 0 0.96618 123 5 0.94994 159 5 0.86201 98 5 0.98333 29 3 0.90667 49 5 0.85895 138 5 0.87293 65 5 0.59630 36 1 0.94163 76 5 0.89470 75 3 1.00000 6 0 0.97258 79 5 0.82335 96 5 0.72522 43 3 0.85577 49 5 0.94019 97 5 0.92834 56 5 0.83325 150 5 0.91311 120 5 0.96571 66 5 0.53333 8 0 0.71667 11 0 0.86212 165 5 0.83769 53 5 0.78471 49 5 0.82904 72 3 0.96667 31 2 0.79444 25 2 0.98750 31 1 0.87988 0.89613 0.89623 0.96078 0.87985 0.86614 0.89690 0.88971 0.77840 0.91943 0.94394 0.95294 0.92183 NA 0.96325 0.95338 0.86981 0.96078 0.93333 0.88076 0.86392 0.66776 0.91802 0.89707 0.96339 0.98142 0.85054 0.74169 0.88905 0.94717 0.94747 0.85003 0.91364 0.94454 0.54902 0.52941 0.85496 0.80950 0.79343 0.84704 0.97059 0.82026 0.97059 1 0.91006 0.87802 0.0375483 5 0.90793 0.87671 0.0312223 0.030737 0.875320 weaklyHypermeth 1 1 insignificant 0.15176 0.591687 insignificant 1 1 insignificant 0.0322953 0.379089 lowCoverage 1 lowCoverage 0.91006 0.87234 0.039629 5 0.90793 0.88195 0.025986 1.8943e-02 0.86462 weaklyHypermeth 7.2857e-01 1 insignificant 0.04075613 0.64494 weaklyHypermeth 1.0000000 1 insignificant 0.0928761 0.211571 lowCoverage 1 lowCoverage 0.91006 0.85577 0.062347 3 0.90793 0.85381 0.054122 0.0031557 3.3540e-01 lowCoverage 0.39447 1.000000 lowCoverage 0.27887 0.09756331 lowCoverage 1 1.00000 lowCoverage 0.025178 0.6062426 lowCoverage 1 lowCoverage 0.87802 0.87234 0.0044208 5 0.87671 0.88195 -0.0052363 3.6156e-01 0.59749 insignificant 1.00000000 1 insignificant 0.14327495 0.52257 insignificant 1.000000 1 insignificant 0.060581 0.425422 lowCoverage 1 lowCoverage 0.87802 0.85577 0.0253716 3 0.87671 0.85381 0.022900 0.37714 0.366938 lowCoverage 1 1 lowCoverage 0.79341 0.238798 lowCoverage 1 1 lowCoverage -0.007117 0.898806 lowCoverage 1 lowCoverage 0.87234 0.85577 0.012307 3 0.88195 0.85381 0.028136 0.39294 3.6397e-01 lowCoverage 1 1.00000000 lowCoverage 0.82194 0.15583880 lowCoverage 1 1.000000 lowCoverage -0.067698 0.4065124 lowCoverage 1 lowCoverage chr7 18484162 18485162 75276 ENSG00000223030 0.72954 362 11 0.58911 260 10 0.69716 205 11 0.66630 238 11 0.66960 122 11 0.67275 445 11 0.62044 190 11 0.61562 207 9 0.58209 140 9 0.68749 186 11 0.64137 245 11 0.75116 138 7 0.74797 151 11 0.63736 78 5 0.75066 191 11 0.72294 66 7 0.61377 77 7 0.76719 196 11 0.69958 206 11 0.75818 333 11 0.63811 78 5 0.67306 122 11 0.68061 206 11 0.68837 87 5 0.82323 87 9 0.61082 227 11 0.74517 151 8 0.67976 67 5 0.64038 168 11 0.71527 216 9 0.70967 262 11 0.67258 475 11 0.54727 163 9 0.52401 216 11 0.58016 265 11 0.72301 105 7 0.65051 116 5 0.70200 235 11 0.64419 311 11 0.70044 309 11 0.74850 303 11 0.75674 244 11 0.71653 323 11 0.80521 0.75676 0.78400 0.80703 0.77950 0.80484 0.78415 0.76214 0.71378 0.79397 0.71867 0.83457 0.83476 0.79369 0.82477 0.75684 0.75391 0.80533 0.79428 0.81882 0.80069 0.74474 0.78187 0.77521 0.89079 0.78561 0.83730 0.73108 0.80823 0.78156 0.79796 0.80757 0.68541 0.63659 0.65784 0.80283 0.75254 0.79401 0.79414 0.80410 0.81126 0.83610 0.81050 5 0.75025 0.75396 0.0012818 11 0.62442 0.63309 -0.0086666 0.521960 0.311662 insignificant 1 1 insignificant 0.48819 0.317695 insignificant 1 1 insignificant -0.0087384 0.678559 insignificant 1 insignificant 0.75118 0.69545 0.076257 11 0.69164 0.60356 0.088085 1.0446e-08 0.99999 weaklyHypermeth 1.3058e-06 1 weaklyHypermeth 0.00003218 0.99998 weaklyHypermeth 0.0045971 1 weaklyHypermeth 0.0598536 0.146107 insignificant 1 insignificant 0.75025 0.78523 -0.014340 11 0.62442 0.66183 -0.037404 0.8482338 1.6246e-01 insignificant 1.00000 1.000000 insignificant 0.90187 0.35297502 insignificant 1 1.00000 insignificant -0.032266 0.2174838 insignificant 1 insignificant 0.75503 0.69545 0.0752031 11 0.67280 0.60356 0.0692392 1.8527e-06 0.99996 weaklyHypermeth 0.00023158 1 weaklyHypermeth 0.00012801 0.99850 weaklyHypermeth 0.016002 1 weaklyHypermeth 0.068592 0.107782 insignificant 1 insignificant 0.75396 0.78523 -0.0145793 11 0.63309 0.66183 -0.028737 0.60565 0.326386 insignificant 1 1 insignificant 0.85465 0.420948 insignificant 1 1 insignificant -0.023528 0.383362 insignificant 1 insignificant 0.69545 0.78562 -0.090237 11 0.60356 0.68672 -0.083167 1.00000 8.2885e-05 weaklyHypometh 1 0.00828847 weaklyHypometh 0.99999 0.00094584 weaklyHypometh 1 0.113250 insignificant -0.092120 0.0476839 weaklyHypometh 1 insignificant chr7 19514714 19515714 75457 FERD3L ENSG00000146618 0.72618 326 9 0.73341 190 8 0.62922 158 9 0.77671 199 9 0.72600 75 7 0.68113 375 9 0.68131 139 8 0.66226 130 5 0.68963 98 9 0.66166 99 7 0.73641 274 9 0.70188 115 8 0.77635 174 7 1.00000 14 2 0.74004 156 9 0.65091 65 8 0.58753 79 8 0.74098 226 9 0.73766 188 9 0.77246 321 9 0.71135 44 4 0.72971 72 8 0.78483 220 9 0.78642 44 5 0.82540 62 5 0.76145 239 9 0.68072 128 8 0.76190 30 1 0.51340 163 5 0.77609 242 7 0.73685 188 5 0.67259 405 9 0.75309 182 7 0.66557 177 9 0.64544 300 9 0.67981 92 8 0.71494 76 8 0.68765 217 9 0.79033 296 9 0.71244 263 9 0.75997 239 9 0.77063 328 9 0.78643 300 9 0.80398 0.76119 0.70182 0.84236 0.78724 0.77038 0.73399 0.80497 0.74748 0.79455 0.80460 0.78263 0.80686 NA 0.79910 0.74347 0.69452 0.81177 0.79644 0.81748 0.67584 0.84206 0.83739 0.82299 0.88245 0.82715 0.78783 0.82630 0.72330 0.83074 0.79932 0.81449 0.78190 0.73596 0.76297 0.69211 0.81564 0.75491 0.86460 0.86401 0.78412 0.83604 0.85295 4 0.76330 0.80566 -0.0256190 9 0.69165 0.71639 -0.0247366 0.998195 0.021323 weaklyHypometh 1 1 insignificant 0.92287 0.041547 weaklyHypometh 1 1 insignificant -0.0078054 0.796176 insignificant 1 insignificant 0.76330 0.72318 0.050899 9 0.69165 0.66973 0.021916 8.5778e-03 0.94900 weaklyHypermeth 3.7295e-01 1 insignificant 0.32469172 0.87016 insignificant 1.0000000 1 insignificant 0.0295035 0.238158 insignificant 1 insignificant 0.76330 0.78191 -0.054031 9 0.69165 0.74737 -0.055717 0.9999894 8.9439e-05 weaklyHypometh 1.00000 0.089439 weaklyHypometh 1.00000 0.00024910 weaklyHypometh 1 0.24910 insignificant -0.043376 0.0779182 insignificant 1 insignificant 0.80566 0.72318 0.0810274 9 0.71639 0.66973 0.0466528 1.2498e-04 0.99394 weaklyHypermeth 0.00892693 1 weaklyHypermeth 0.04099800 0.97009 weaklyHypermeth 1.000000 1 insignificant 0.037309 0.203439 insignificant 1 insignificant 0.80566 0.78191 -0.0263537 9 0.71639 0.74737 -0.030980 0.96987 0.236574 insignificant 1 1 insignificant 0.92448 0.213222 insignificant 1 1 insignificant -0.035570 0.211990 insignificant 1 insignificant 0.72318 0.78191 -0.101264 9 0.66973 0.74737 -0.077633 0.99991 1.5190e-05 weaklyHypometh 1 0.00168778 weaklyHypometh 0.99978 0.00088323 weaklyHypometh 1 0.113250 insignificant -0.072879 0.0069407 weaklyHypometh 1 insignificant chr7 22796242 22797242 75683 ENSG00000173534 0.86972 106 4 0.74478 75 5 0.47436 37 2 0.77675 128 5 0.85119 25 3 0.81206 144 5 0.53056 19 3 0.91620 56 5 0.49333 27 4 0.92434 34 4 0.72267 132 5 0.66667 9 0 0.81654 62 5 0.68571 22 3 0.76667 24 2 0.58889 12 1 NA 0 0 0.82602 88 5 0.82222 41 3 0.74380 141 5 0.78138 50 5 0.80028 61 5 0.85810 73 5 0.61323 56 5 0.74222 46 3 0.86844 72 5 0.80101 43 4 0.90278 21 2 0.81869 56 4 0.87185 94 5 0.82442 76 4 0.90108 139 5 0.65964 86 5 0.65385 49 4 0.70694 57 3 1.00000 3 0 0.64722 55 4 0.74105 94 5 0.61540 61 4 0.90436 88 5 0.85675 91 5 0.90548 39 3 0.89394 95 5 0.78514 0.70306 0.75608 0.69732 0.78448 0.73249 0.50770 0.90997 0.62414 0.88489 0.80973 0.87624 0.73750 0.79310 0.57759 0.58486 NA 0.77842 0.85632 0.70258 0.67882 0.72083 0.79926 0.64642 0.79195 0.76758 0.66797 0.78879 0.86155 0.83923 0.69624 0.85802 0.61858 0.63594 0.63247 0.91432 0.63625 0.75269 0.63777 0.88720 0.81997 0.84181 0.85325 0 0.78342 0.80686 -0.0209791 4 0.77492 0.82429 -0.0493728 0.959622 0.248638 lowCoverage 1 1 lowCoverage 0.93949 0.342835 lowCoverage 1 1 lowCoverage -0.0767377 0.056763 lowCoverage 1 lowCoverage 0.78342 0.67442 0.113304 4 0.77492 0.72010 0.054811 5.4737e-04 0.98433 lowCoverage 3.2198e-02 1 lowCoverage 0.05575419 0.94319 lowCoverage 1.0000000 1 lowCoverage 0.0037678 0.953847 lowCoverage 1 lowCoverage 0.78342 0.82086 -0.063484 4 0.77492 0.79827 -0.023350 0.9739213 4.0071e-02 lowCoverage 1.00000 1.000000 lowCoverage 0.96715 0.02981815 lowCoverage 1 1.00000 lowCoverage -0.096633 0.1747868 lowCoverage 1 lowCoverage 0.80686 0.67442 0.1384332 5 0.82429 0.72010 0.1041842 3.4615e-06 0.99644 weaklyHypermeth 0.00034615 1 weaklyHypermeth 0.00249095 0.98563 weaklyHypermeth 0.207580 1 insignificant 0.080506 0.220848 lowCoverage 1 lowCoverage 0.80686 0.82086 -0.0415934 4 0.82429 0.79827 0.026022 0.74515 0.092801 lowCoverage 1 1 lowCoverage 0.79935 0.096529 lowCoverage 1 1 lowCoverage -0.019895 0.753670 lowCoverage 1 lowCoverage 0.67442 0.82086 -0.174271 4 0.72010 0.79827 -0.078162 0.99740 7.0912e-06 lowCoverage 1 0.00088640 lowCoverage 0.99914 0.00070837 lowCoverage 1 0.113250 lowCoverage -0.100401 0.2322710 lowCoverage 1 lowCoverage chr7 24554395 24555395 75738 ENSG00000206877 0.85976 526 6 0.73975 398 6 0.71254 85 6 0.91193 397 6 0.76725 117 6 0.79504 369 6 0.80556 269 6 0.75030 219 6 0.70239 103 6 0.69192 94 5 0.68914 354 6 0.71667 27 4 0.60918 187 6 0.71458 103 6 0.74299 123 5 0.64734 57 5 0.63000 113 5 0.81786 380 5 0.77925 230 6 0.78034 429 6 0.78788 67 6 0.84444 29 4 0.75699 203 6 0.66210 58 5 0.84150 124 6 0.82620 463 6 0.71577 88 6 0.84226 40 5 0.82368 364 6 0.77310 407 6 0.78329 384 6 0.77496 314 6 0.75002 346 6 0.69282 347 6 0.75581 370 6 0.91041 124 6 0.58571 145 6 0.65643 454 6 0.85742 619 6 0.82737 368 6 0.84876 409 6 0.75700 588 5 0.80673 447 6 0.83220 0.71779 0.68733 0.87832 0.62878 0.76477 0.74254 0.70321 0.60924 0.63547 0.64462 0.71005 0.65243 0.65766 0.59284 0.74792 0.61290 0.79927 0.74308 0.75017 0.74229 0.81507 0.72328 0.59326 0.83830 0.79511 0.66631 0.80467 0.75458 0.75462 0.75663 0.73692 0.75125 0.71413 0.65218 0.92969 0.61485 0.63441 0.84001 0.79539 0.83989 0.75669 0.78998 5 0.75016 0.76820 -0.0146326 6 0.74820 0.81520 -0.0670022 0.712377 0.105623 insignificant 1 1 insignificant 0.98907 0.016902 weaklyHypometh 1 1 insignificant -0.0428254 0.075907 insignificant 1 insignificant 0.75016 0.70493 0.047165 6 0.74820 0.71326 0.034940 8.2359e-04 0.97331 weaklyHypermeth 4.5755e-02 1 weaklyHypermeth 0.09455434 0.83055 insignificant 1.0000000 1 insignificant 0.0179892 0.720675 insignificant 1 insignificant 0.75033 0.81201 -0.059010 6 0.77290 0.82214 -0.049246 0.9791035 2.5565e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.99719 0.00143570 weaklyHypometh 1 0.47857 insignificant -0.076268 0.0089905 weaklyHypometh 1 insignificant 0.76820 0.70493 0.0636320 6 0.81520 0.71326 0.1019417 9.3477e-05 0.97973 weaklyHypermeth 0.00719058 1 weaklyHypermeth 0.00549073 0.96369 weaklyHypermeth 0.392195 1 insignificant 0.060815 0.249123 insignificant 1 insignificant 0.76811 0.81201 -0.0434398 6 0.78440 0.82214 -0.037743 0.93616 0.044067 weaklyHypometh 1 1 insignificant 0.82892 0.083885 insignificant 1 1 insignificant -0.033442 0.193478 insignificant 1 insignificant 0.70483 0.81201 -0.107798 6 0.70714 0.82214 -0.115008 0.99991 4.7043e-04 weaklyHypometh 1 0.03618657 weaklyHypometh 0.99821 0.00098754 weaklyHypometh 1 0.113250 insignificant -0.094257 0.0965590 insignificant 1 insignificant chr7 26513371 26514371 75926 ENSG00000214870 0.81494 245 7 0.65704 106 7 0.65907 131 7 0.78620 156 7 0.73571 75 7 0.71839 201 7 0.48848 71 7 0.65794 168 7 0.74242 69 7 0.69094 70 7 0.80294 257 7 0.74444 55 7 0.80269 66 7 0.65693 51 4 0.80730 102 7 0.54841 64 3 0.77166 71 4 0.81176 185 7 0.80150 117 7 0.76903 199 7 0.83333 31 1 0.83719 59 7 0.77195 124 7 0.66905 34 1 0.75185 40 6 0.67019 147 7 0.90714 39 1 0.75873 48 7 0.64250 97 7 0.71743 162 7 0.76647 115 7 0.63305 195 7 0.66235 140 7 0.68740 113 7 0.73151 144 7 0.83333 34 3 0.45574 70 7 0.67387 136 7 0.76057 157 7 0.79401 231 7 0.75779 181 7 0.86337 176 7 0.87630 198 7 0.81755 0.60021 0.70769 0.81837 0.74987 0.76956 0.57675 0.69884 0.68843 0.83888 0.79026 0.80323 0.77696 0.68997 0.78191 0.62545 0.76397 0.80020 0.80615 0.78948 0.83692 0.84933 0.79599 0.74418 0.84767 0.77171 0.89113 0.87727 0.67783 0.83758 0.79931 0.79946 0.64412 0.72598 0.76504 0.88949 0.54574 0.70416 0.75803 0.80816 0.82418 0.86301 0.88335 1 0.75641 0.80110 -0.0385636 7 0.74948 0.70530 0.0441792 0.743243 0.088811 insignificant 1 1 insignificant 0.88252 0.076534 insignificant 1 1 insignificant -0.0231850 0.472265 insignificant 1 insignificant 0.75641 0.70173 0.064442 7 0.74948 0.69484 0.054635 2.7960e-03 0.98159 weaklyHypermeth 1.3315e-01 1 insignificant 0.04601495 0.99019 weaklyHypermeth 1.0000000 1 insignificant 0.0493564 0.396120 insignificant 1 insignificant 0.75596 0.80594 -0.064108 7 0.72839 0.79836 -0.069972 0.9991608 1.8584e-03 weaklyHypometh 1.00000 0.619479 insignificant 0.99978 0.00324805 weaklyHypometh 1 0.81201 insignificant -0.087016 0.0225741 weaklyHypometh 1 insignificant 0.80110 0.70173 0.1001980 7 0.70530 0.69484 0.0104562 6.0979e-04 0.98762 weaklyHypermeth 0.04065264 1 weaklyHypermeth 0.01912794 0.99946 weaklyHypermeth 1.000000 1 insignificant 0.072541 0.235196 insignificant 1 insignificant 0.80314 0.80594 -0.0231031 7 0.74545 0.79836 -0.052907 0.85981 0.291917 insignificant 1 1 insignificant 0.87938 0.471084 insignificant 1 1 insignificant -0.063831 0.095373 insignificant 1 insignificant 0.70175 0.80594 -0.127005 7 0.66727 0.79836 -0.131092 0.99988 4.3159e-06 weaklyHypometh 1 0.00061656 weaklyHypometh 0.99998 0.00015605 weaklyHypometh 1 0.052018 weaklyHypometh -0.136373 0.0453247 weaklyHypometh 1 insignificant chr7 26521210 26522210 75927 ENSG00000214870 0.84975 105 6 0.77621 89 6 0.76068 110 6 0.91458 87 5 0.86233 71 6 0.85970 142 6 0.70175 60 6 0.80556 83 6 0.83289 78 6 0.76861 71 6 0.75817 216 6 0.79646 68 3 0.86302 133 6 0.76499 55 6 0.94949 58 6 0.93732 61 2 0.87295 83 2 0.84695 135 5 0.83834 81 5 0.77376 106 5 0.87500 24 1 0.78095 49 5 0.75238 69 6 0.68299 40 4 0.68000 25 5 0.79407 94 5 0.88427 68 6 0.69281 37 2 0.76893 84 5 0.81960 102 6 0.78814 120 5 0.81471 149 6 0.84316 69 6 0.65963 65 6 0.60317 158 6 0.50000 8 0 0.76667 39 2 0.66852 121 6 0.87809 76 5 0.83129 94 5 0.76852 94 5 0.77083 51 5 0.71897 143 5 0.84680 0.76070 0.82292 0.86267 0.81216 0.79184 0.69468 0.75796 0.78718 0.80984 0.76266 0.78595 0.87051 0.71088 0.91365 0.88429 0.95855 0.84588 0.80940 0.73785 0.81294 0.79892 0.81628 0.72691 0.64791 0.85044 0.85384 0.76701 0.74799 0.87858 0.65549 0.87358 0.83315 0.63754 0.74390 0.69203 0.75268 0.74655 0.84989 0.80126 0.77905 0.78671 0.64810 1 0.81977 0.80256 0.0127654 6 0.72969 0.82771 -0.0980164 0.459836 0.907100 insignificant 1 1 insignificant 0.36324 0.989881 insignificant 1 1 insignificant 0.0488553 0.057690 lowCoverage 1 lowCoverage 0.81977 0.76304 0.057800 6 0.72969 0.67937 0.050320 3.4466e-04 0.99993 weaklyHypermeth 2.2977e-02 1 weaklyHypermeth 0.00446333 0.99792 weaklyHypermeth 0.3821111 1 insignificant 0.1531509 0.025051 lowCoverage 1 lowCoverage 0.82114 0.76419 0.048504 5 0.82666 0.78523 0.041426 0.0361848 9.4996e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.11275 0.87847168 insignificant 1 1.00000 insignificant 0.033136 0.3270142 insignificant 1 insignificant 0.80256 0.76304 0.0595678 6 0.82771 0.67937 0.1483365 1.2570e-01 0.99991 insignificant 1.00000000 1 insignificant 0.21302521 0.99993 insignificant 1.000000 1 insignificant 0.104296 0.092036 lowCoverage 1 lowCoverage 0.80308 0.76419 0.0284049 5 0.80080 0.78523 0.015568 0.47293 0.822477 insignificant 1 1 insignificant 0.79694 0.683392 insignificant 1 1 insignificant -0.015719 0.654703 lowCoverage 1 lowCoverage 0.76718 0.76419 -0.023763 5 0.74552 0.78523 -0.039716 0.92368 2.3893e-01 insignificant 1 1.00000000 insignificant 0.97809 0.16355240 insignificant 1 1.000000 insignificant -0.120015 0.0676192 lowCoverage 1 lowCoverage chr7 27225048 27226048 76070 HOXA13 ENSG00000106031 0.91149 142 3 0.77985 130 5 0.84921 69 5 0.84972 131 3 0.83352 34 3 0.60525 238 3 0.76444 33 3 0.75724 118 5 0.82083 65 5 0.89441 59 4 0.85689 148 5 0.75556 11 1 0.87942 105 5 0.68553 45 2 0.80476 46 3 0.50000 9 1 0.71429 8 1 0.82264 163 3 0.85725 154 4 0.85820 155 3 0.84167 24 2 0.73427 60 4 0.74105 98 3 0.52484 65 5 0.50000 19 2 0.86939 98 5 0.69570 58 5 0.89576 40 3 0.91916 123 5 0.85623 203 5 0.89923 109 5 0.75347 175 5 0.72292 113 5 0.75667 31 3 0.45000 96 4 0.00000 2 0 0.76246 93 5 0.51055 90 5 0.78168 72 3 0.84988 116 3 0.82301 107 3 0.88889 35 3 0.50189 86 3 0.86159 0.72791 0.79177 0.86304 0.86082 0.78895 0.72957 0.83620 0.88842 0.83537 0.85693 0.76158 0.87364 0.82075 0.83555 0.53390 0.80622 0.72013 0.88518 0.87838 0.95763 0.76874 0.90240 0.72068 0.54661 0.82024 0.77253 0.81397 0.88041 0.85400 0.88452 0.83053 0.73643 0.62910 0.72881 0.070916 0.77099 0.64849 0.79739 0.84827 0.83662 0.89718 0.83719 0 0.81481 0.83582 -0.0180856 4 0.80518 0.81353 -0.0083522 0.82907 0.344645 lowCoverage 1 1 lowCoverage 0.29804 0.61724 lowCoverage 1 1 lowCoverage 0.0207942 0.66061 lowCoverage 1 lowCoverage 0.81481 0.70588 0.0968108 4 0.80518 0.59671 0.208473 2.5277e-07 0.41096 lowCoverage 1.4043e-05 1 lowCoverage 0.00613818 0.88107 lowCoverage 0.341010 1 lowCoverage 0.256259 0.085701 lowCoverage 1 lowCoverage 0.81481 0.85337 -0.019806 3 0.80518 0.50176 0.303423 2.3088e-05 0.468947 lowCoverage 0.0038479 1 lowCoverage 0.19218 0.74672 lowCoverage 1 1 lowCoverage 0.0209552 0.784918 lowCoverage 1 lowCoverage 0.83582 0.70588 0.126910 5 0.81353 0.59671 0.21682 2.6985e-06 0.67146 weaklyHypermeth 0.00015873 1 weaklyHypermeth 0.0364135 0.90942 weaklyHypermeth 1.00000 1 insignificant 0.2354648 0.110492 lowCoverage 1 lowCoverage 0.83582 0.85337 0.0010812 3 0.81353 0.50176 0.311775 0.00157571 0.830879 lowCoverage 0.131309 1 lowCoverage 0.17721 0.460303 lowCoverage 1 1 lowCoverage 0.00016097 0.9984534 lowCoverage 1 lowCoverage 0.70588 0.85337 -0.05702 3 0.59671 0.50176 0.09495 0.181119 0.0159531 lowCoverage 1 0.72514 lowCoverage 0.29446 0.0865909 lowCoverage 1 1.0000 lowCoverage -0.235304 0.1280898 lowCoverage 1.00000 lowCoverage chr7 28711334 28712334 76298 CREB5 ENSG00000146592 0.70130 170 5 0.69268 119 5 0.71000 68 3 0.61905 79 5 0.59048 32 5 0.65033 215 5 0.62000 23 3 0.59312 86 3 0.88952 46 3 0.75810 43 3 0.72218 111 5 0.40000 18 0 0.73949 87 5 NA 0 0 0.87669 65 3 0.85000 12 0 0.72286 29 5 0.68129 92 5 0.70238 173 5 0.69655 205 5 0.60000 40 3 0.58462 65 5 0.83013 95 5 0.63636 38 3 0.52000 40 5 0.71490 279 5 0.66071 33 4 0.50000 8 0 0.67576 137 5 0.65631 278 5 0.68240 267 5 0.65478 251 5 0.68703 128 5 0.60180 58 3 0.65351 117 5 0.59000 38 3 0.71889 36 3 0.65420 222 5 0.70881 93 5 0.77926 120 5 0.75588 141 5 0.74730 115 5 0.73290 109 5 0.72380 0.67571 0.70585 0.66958 0.61196 0.69862 0.61170 0.62583 0.87376 0.71940 0.72239 0.39450 0.75333 NA 0.85186 0.82181 0.69119 0.68645 0.73155 0.73089 0.62589 0.63993 0.82237 0.70503 0.58085 0.73108 0.66679 0.48936 0.68742 0.71665 0.72474 0.68801 0.65700 0.63700 0.71262 0.643617 0.70887 0.69830 0.71563 0.75405 0.77324 0.73638 0.75009 1 0.68918 0.68452 0.0028675 5 0.68360 0.67418 0.0094158 0.53719 0.431184 insignificant 1 1 insignificant 0.13633 0.48127 insignificant 1 1 insignificant 0.0525824 0.15537 lowCoverage 1 lowCoverage 0.68918 0.64775 0.0428210 5 0.68360 0.63325 0.050346 4.1023e-02 0.96668 weaklyHypermeth 1.0000e+00 1 insignificant 0.21371187 0.91923 insignificant 1.000000 1 insignificant 0.044674 0.185046 lowCoverage 1 lowCoverage 0.68918 0.74048 -0.051574 5 0.68360 0.74570 -0.062101 9.5114e-01 0.064076 insignificant 1.0000000 1 insignificant 0.95692 0.21612 insignificant 1 1 insignificant -0.0492513 0.094503 lowCoverage 1 lowCoverage 0.68452 0.64775 0.039822 5 0.67418 0.63325 0.04093 2.1465e-02 0.93834 weaklyHypermeth 0.61327457 1 insignificant 0.1756006 0.72934 insignificant 1.00000 1 insignificant -0.0079079 0.809575 lowCoverage 1 lowCoverage 0.68452 0.74048 -0.0550542 5 0.67418 0.74570 -0.071517 0.78770424 0.020328 weaklyHypometh 1.000000 1 insignificant 0.90429 0.040367 weaklyHypometh 1 1 insignificant -0.10183374 0.0024911 lowCoverage 1 lowCoverage 0.64775 0.74048 -0.09226 5 0.63325 0.74570 -0.11245 0.993484 0.0079398 weaklyHypometh 1 0.41789 insignificant 0.98422 0.1596348 insignificant 1 1.0000 insignificant -0.093926 0.0038643 lowCoverage 0.38643 lowCoverage chr7 29356192 29357192 76369 CHN2 ENSG00000106069 0.71009 172 5 0.77472 197 7 0.59611 88 7 0.93233 86 4 0.86044 44 3 0.81970 220 7 0.78734 55 5 0.79039 127 7 0.75714 45 7 0.93254 58 5 0.82671 195 7 0.80000 22 2 0.78426 149 7 0.75357 38 4 0.60735 82 7 0.57619 22 3 0.85714 11 0 0.83234 93 5 0.74891 83 7 0.79627 164 7 0.82673 45 3 0.71315 42 4 0.74725 78 5 0.78651 52 5 0.80390 44 3 0.84268 184 7 0.77800 68 5 0.58673 28 2 0.61727 116 7 0.83626 156 7 0.74791 134 7 0.89672 230 7 0.83230 104 7 0.65235 72 7 0.85716 199 7 0.63333 10 0 0.63977 59 5 0.81960 160 7 0.72507 82 5 0.58879 162 5 0.81923 113 5 0.83458 67 5 0.77933 74 4 0.79935 0.71891 0.50459 0.90977 0.80047 0.79188 0.73792 0.72132 0.71939 0.94898 0.80966 0.83673 0.73089 0.81391 0.77630 0.56074 0.83673 0.77069 0.68876 0.76359 0.79966 0.64075 0.64215 0.81634 0.80133 0.81855 0.71911 0.80661 0.76144 0.82378 0.75290 0.87510 0.88181 0.74743 0.79918 0.595238 0.61557 0.74415 0.72753 0.71180 0.86044 0.76572 0.75055 1 0.78678 0.80969 -0.0181579 7 0.69095 0.71310 -0.0221481 0.94566 0.090786 insignificant 1 1 insignificant 0.78074 0.50100 insignificant 1 1 insignificant 0.0119181 0.72951 insignificant 1 insignificant 0.78678 0.81291 -0.0032995 7 0.69095 0.80909 -0.118137 8.9615e-01 0.71791 insignificant 1.0000e+00 1 insignificant 0.53178317 0.85275 insignificant 1.000000 1 insignificant 0.038092 0.459583 insignificant 1 insignificant 0.78737 0.74699 0.016063 5 0.79313 0.68879 0.104344 1.8967e-04 0.592358 weaklyHypermeth 0.0210743 1 weaklyHypermeth 0.19806 0.62099 insignificant 1 1 insignificant 0.0277759 0.594088 lowCoverage 1 lowCoverage 0.80969 0.81291 0.014628 7 0.71310 0.80909 -0.09599 4.8794e-01 0.41997 insignificant 1.00000000 1 insignificant 0.2754475 0.54575 insignificant 1.00000 1 insignificant 0.0261735 0.621431 insignificant 1 insignificant 0.81443 0.74699 0.0333067 5 0.81140 0.68879 0.122616 0.00012034 0.813649 weaklyHypermeth 0.017699 1 weaklyHypermeth 0.31696 0.635753 insignificant 1 1 insignificant 0.01585777 0.7675537 lowCoverage 1 lowCoverage 0.81333 0.74699 0.02418 5 0.80217 0.68879 0.11338 0.049687 0.5542224 weaklyHypermeth 1 1.00000 insignificant 0.68471 0.6459369 insignificant 1 1.0000 insignificant -0.010316 0.8724003 lowCoverage 1.00000 lowCoverage chr7 30665544 30666544 76398 GARS ENSG00000106105 0.83381 66 4 0.45913 66 3 0.75029 84 5 0.89869 59 5 0.79020 81 5 0.94142 226 5 0.76206 99 5 0.87932 74 5 0.79875 72 5 0.91667 59 5 0.86984 130 4 0.63000 55 5 0.75205 53 5 0.77944 45 5 0.86430 96 5 1.00000 13 0 0.50000 2 0 0.74956 71 5 0.95190 63 3 0.97654 202 5 0.90294 54 3 1.00000 22 3 0.89762 88 5 0.72545 55 5 0.83333 27 2 0.74369 88 5 0.55207 85 5 0.76143 38 5 0.71917 90 5 0.95083 86 5 0.93200 93 4 0.76305 214 5 0.44779 122 5 0.59444 51 4 0.93913 72 3 0.40000 8 0 0.59790 65 4 0.65325 112 3 0.76544 100 3 0.92844 75 3 0.85000 37 3 0.86682 46 5 0.80333 53 5 0.85687 0.53122 0.72219 0.89325 0.79555 0.91813 0.81758 0.87696 0.81920 0.92759 0.84943 0.75862 0.78199 0.80702 0.85853 1.00000 NA 0.74949 0.90773 0.96887 0.84312 0.94818 0.89860 0.78474 0.75766 0.87618 0.75666 0.76806 0.75407 0.93317 0.91057 0.90940 0.59644 0.61073 0.90555 0.344828 0.66871 0.69746 0.70625 0.90434 0.85632 0.86082 0.83908 1 0.85087 0.85942 -0.0158565 5 0.86272 0.71796 0.1447574 0.95865 0.477216 insignificant 1 1 insignificant 0.67506 0.24437 insignificant 1 1 insignificant -0.0099333 0.84083 lowCoverage 1 lowCoverage 0.85087 0.62093 0.2181151 5 0.86272 0.56439 0.298324 1.0630e-08 1.00000 hypermethylated 7.0865e-07 1 hypermethylated 0.00255819 0.97320 weaklyHypermeth 0.159887 1 insignificant 0.199779 0.050104 lowCoverage 1 lowCoverage 0.85077 0.78778 0.066879 4 0.83526 0.81837 0.016891 5.7214e-02 0.420417 lowCoverage 1.0000000 1 lowCoverage 0.41882 0.13671 lowCoverage 1 1 lowCoverage -0.0376086 0.391386 lowCoverage 1 lowCoverage 0.85942 0.62093 0.231257 5 0.71796 0.56439 0.15357 7.6426e-07 0.94377 hypermethylated 0.00005095 1 hypermethylated 0.0057621 0.88544 weaklyHypermeth 0.30327 1 insignificant 0.2097123 0.043185 lowCoverage 1 lowCoverage 0.86218 0.78778 0.0797492 4 0.86155 0.81837 0.043182 0.04775129 0.713948 lowCoverage 1.000000 1 lowCoverage 0.30197 0.523147 lowCoverage 1 1 lowCoverage -0.02767528 0.5577235 lowCoverage 1 lowCoverage 0.62648 0.78778 -0.15957 4 0.62013 0.81837 -0.19824 0.997302 0.0039942 lowCoverage 1 0.23495 lowCoverage 0.99207 0.0494229 lowCoverage 1 1.0000 lowCoverage -0.237388 0.0269283 lowCoverage 1.00000 lowCoverage chr7 31513042 31514042 76473 NEUROD6 ENSG00000164600 0.96972 238 5 0.91969 102 4 0.80478 214 5 0.92381 76 5 0.91197 123 3 0.88590 83 3 0.87870 153 4 0.84965 91 3 0.87333 59 4 0.96314 38 2 0.94738 104 3 0.94058 55 3 0.93498 107 5 0.94816 73 5 0.77252 89 3 0.90333 57 3 1.00000 38 2 0.86490 365 5 0.97004 107 3 1.00000 79 3 0.93750 32 3 0.83333 5 0 0.87233 158 5 0.97312 46 3 0.95833 14 2 0.94671 140 5 0.64066 71 3 0.78182 22 1 0.92849 152 3 0.93396 107 5 0.90861 123 5 0.91531 83 3 0.73590 113 3 0.48376 73 3 0.88214 70 3 NA 0 0 0.66465 98 5 0.91144 211 5 0.95043 300 5 0.82892 244 5 0.97102 147 5 0.90052 247 5 0.96042 151 5 0.96041 0.88212 0.76446 0.97012 0.92362 0.97466 0.83684 0.92104 0.84589 0.92557 0.95335 0.91283 0.97086 0.92808 0.94617 0.93167 0.98516 0.87775 0.97230 1.00000 0.90686 0.84114 0.83705 0.95272 0.94730 0.97275 0.90810 0.98128 0.93914 0.86937 0.90799 0.95238 0.70479 0.50435 0.97263 NA 0.57670 0.89157 0.94647 0.96397 0.93424 0.95161 0.96087 2 0.89560 0.91789 -0.0104734 5 0.89104 0.91500 -0.0239692 0.72500 0.068703 insignificant 1 1 insignificant 0.40061 0.79688 insignificant 1 1 insignificant 0.0272814 0.38381 lowCoverage 1 lowCoverage 0.89560 0.76991 0.1395659 4 0.89104 0.81055 0.080484 5.8145e-05 0.85015 lowCoverage 2.6430e-03 1 lowCoverage 0.00067997 0.99824 lowCoverage 0.047174 1 lowCoverage 0.177553 0.083751 lowCoverage 1 lowCoverage 0.89560 0.94907 -0.049808 5 0.89104 0.94568 -0.054649 9.8426e-01 0.016955 weaklyHypometh 1.0000000 1 insignificant 0.76657 0.59283 insignificant 1 1 insignificant -0.0091307 0.767269 lowCoverage 1 lowCoverage 0.91789 0.76991 0.144752 4 0.91500 0.81055 0.10445 5.3077e-04 0.99118 lowCoverage 0.02412581 1 lowCoverage 0.0036232 0.97257 lowCoverage 0.22645 1 lowCoverage 0.1502712 0.127541 lowCoverage 1 lowCoverage 0.91815 0.94766 -0.0276680 5 0.94688 0.91605 0.030825 0.98885218 0.522991 insignificant 1.000000 1 insignificant 0.97373 0.776842 insignificant 1 1 insignificant -0.03641204 0.3556404 lowCoverage 1 lowCoverage 0.76991 0.94907 -0.17802 4 0.81055 0.94568 -0.13513 0.999769 0.0016397 lowCoverage 1 0.10248 lowCoverage 0.99902 0.0067265 lowCoverage 1 0.6074 lowCoverage -0.186683 0.0730300 lowCoverage 1.00000 lowCoverage chr7 41704837 41705837 77203 C7orf10 ENSG00000175600 0.029053 86 5 0.048917 280 5 0.081956 283 5 0.064935 37 5 0.052108 238 5 0.22897 122 5 0.029932 450 5 0.059069 265 5 0.051556 346 5 0.0037037 255 5 0.077205 222 5 0.018569 259 5 0.049889 260 5 NA 0 0 0.083551 302 5 0.023267 424 5 0.061088 397 5 0.042222 38 4 0.12987 194 5 0.053841 101 5 0.04000 38 3 0.13333 7 1 0.034169 260 5 0.02000 56 5 0.00000 6 0 0.031282 329 5 0.036508 74 5 0.028571 38 3 0.037281 218 5 0.030604 331 5 0.067818 299 5 0.026256 119 5 0.33589 256 5 0.11993 251 5 0.20340 176 5 0.00000 19 1 0.19302 59 5 0.015436 298 5 0.048963 82 5 0.096322 126 5 0.00000 4 0 0.20000 19 1 0.00000 15 0 0.033857 0.047204 0.070272 0.083615 0.053388 0.22693 0.029121 0.064985 0.052677 0.0015221 0.061915 0.020270 0.052892 NA 0.073783 0.022366 0.059439 0.051598 0.10911 0.050469 0.043836 0.037736 0.027692 0.020548 0.00000 0.027056 0.024788 0.011742 0.030761 0.027368 0.056182 0.021328 0.34239 0.11004 0.16578 0.000000 0.17717 0.011325 0.061025 0.083083 0.014840 0.14726 0.00000 0 0.055056 0.037746 0.0176526 5 0.055803 0.039768 0.01603467 0.004282 0.977312 weaklyHypermeth 1 1 insignificant 5.8949e-06 0.9813675 weaklyHypermeth 0.0058949 1.0000 weaklyHypermeth 0.02213030 0.1449294 lowCoverage 1 lowCoverage 0.055056 0.17186 -0.116192 5 0.055803 0.17115 -0.11534513 1.0000e+00 1.2822e-06 weaklyHypometh 1.0000e+00 0.00064112 weaklyHypometh 9.3315e-01 0.199946 insignificant 1.0000e+00 1 insignificant -0.0819970 0.17771835 lowCoverage 1.000000 lowCoverage 0.055056 0.08130 -2.7240e-02 5 0.055803 0.087696 -0.0318937 0.9074693 0.0244191 weaklyHypometh 1.00000 1.00 insignificant 0.1589625 0.9795502 insignificant 1.00000 1 insignificant -6.4414e-03 0.875510 lowCoverage 1.00000 lowCoverage 0.037746 0.17186 -0.132225 5 0.039768 0.17115 -0.131380 1.0000e+00 5.0218e-06 weaklyHypometh 1.0000e+00 0.0025109 weaklyHypometh 9.9977e-01 0.014054 weaklyHypometh 1.0000e+00 1 insignificant -0.104127 1.0148e-01 lowCoverage 1.0000000 lowCoverage 0.037746 0.08130 -0.0468549 5 0.039768 0.087696 -0.04792834 9.9931e-01 1.1805e-05 weaklyHypometh 1.0000000 0.011805 weaklyHypometh 9.2143e-01 0.499817 insignificant 1.000000 1 insignificant -0.0285717 0.494684 lowCoverage 1 lowCoverage 0.17186 0.08130 0.080535 5 0.17115 0.087696 0.0834515 0.077041 9.9440e-01 insignificant 1 1.0000e+00 insignificant 0.15598 9.9408e-01 insignificant 1 1.0000000 insignificant 0.075556 0.26832475 lowCoverage 1.000000 lowCoverage chr7 41806293 41807293 77209 INHBA ENSG00000122641 0.650102 328 9 0.589768 76 4 0.600056 161 6 0.664007 198 6 0.647778 119 6 0.56024 163 6 0.605321 90 4 0.661609 132 6 0.681481 69 4 0.6635719 92 5 0.576102 164 6 0.572917 54 3 0.602340 142 6 0.59083 113 7 0.678114 69 6 0.736111 36 3 0.589539 141 3 0.599294 306 9 0.72538 120 4 0.579924 140 6 0.55006 46 4 0.75667 39 4 0.696038 187 7 0.74190 74 6 0.57176 52 5 0.604590 135 4 0.725541 64 4 0.561111 22 1 0.616463 126 4 0.588783 107 4 0.704850 93 6 0.554584 147 4 0.57847 106 6 0.69792 53 6 0.54401 112 7 0.66667 7 0 0.60173 111 6 0.615152 112 4 0.710705 336 7 0.646733 294 7 0.59796 304 8 0.57064 270 4 0.69558 321 6 0.800344 0.689920 0.723562 0.755975 0.811521 0.80692 0.716908 0.728262 0.713948 0.7762981 0.790339 0.615924 0.808492 0.73420 0.793338 0.817967 0.693489 0.832148 0.78505 0.750242 0.750950 0.845967 0.762493 0.854117 0.80408 0.762304 0.826048 0.753546 0.819652 0.810633 0.852601 0.784429 0.64953 0.80615 0.71825 0.843972 0.73347 0.762492 0.827252 0.818826 0.850415 0.80390 0.77339 1 0.681936 0.720696 -0.0029015 6 0.564592 0.573777 -0.00918500 0.290333 0.274871 insignificant 1 1 insignificant 4.8157e-01 0.0999310 insignificant 1.0000000 1.0000 insignificant -0.01063883 0.6838737 lowCoverage 1 lowCoverage 0.683198 0.66267 0.042166 6 0.644801 0.55400 0.09080321 1.8756e-01 9.5568e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.3128e-01 0.976480 insignificant 1.0000e+00 1 insignificant 0.0113999 0.67157518 lowCoverage 1.000000 lowCoverage 0.683568 0.65180 -2.8100e-02 6 0.658690 0.656902 0.0017885 0.5449059 0.1896318 insignificant 1.00000 1.00 insignificant 0.6086814 0.1721216 insignificant 1.00000 1 insignificant -1.5600e-02 0.616265 insignificant 1.00000 insignificant 0.722479 0.66400 0.044031 6 0.593897 0.60436 -0.010464 2.3132e-02 2.9421e-01 weaklyHypermeth 2.7538e-01 1.0000000 insignificant 2.8885e-01 0.617161 insignificant 1.0000e+00 1 insignificant 0.022039 5.0993e-01 lowCoverage 1.0000000 lowCoverage 0.724074 0.65220 -0.0319444 6 0.625716 0.671165 -0.04544982 9.9268e-01 1.2563e-01 insignificant 1.0000000 1.000000 insignificant 9.0168e-01 0.172195 insignificant 1.000000 1 insignificant -0.0049611 0.891478 lowCoverage 1 lowCoverage 0.66132 0.65157 -0.077408 6 0.51345 0.625711 -0.1122585 0.993222 4.7723e-03 weaklyHypometh 1 1.0092e-01 insignificant 0.99954 1.6214e-01 insignificant 1 1.0000000 insignificant -0.027000 0.46876265 lowCoverage 1.000000 lowCoverage chr7 43663392 43664392 77321 C7orf44 ENSG00000106603 0.645942 156 6 0.811927 124 6 0.564123 83 6 0.759241 150 6 0.710833 66 6 0.73297 175 6 0.594567 124 6 0.698252 151 6 0.748958 59 6 0.7894841 65 6 0.644348 217 6 0.642857 26 3 0.837355 67 6 0.76528 52 6 0.842063 72 6 0.706349 28 3 0.450000 307 4 0.762105 126 6 0.62381 215 6 0.669841 116 6 0.66190 36 6 0.51270 67 6 0.582609 93 6 0.75278 66 4 0.88868 46 4 0.736278 195 6 0.700362 74 3 0.614966 41 5 0.798849 192 6 0.810421 182 6 0.760405 208 6 0.698215 154 6 0.68832 97 6 0.73590 79 3 0.61806 114 6 0.66667 9 0 0.60728 103 6 0.709691 222 6 0.730224 153 6 0.720884 138 6 0.70707 158 6 0.67323 115 6 0.76742 128 6 0.689197 0.822409 0.716419 0.808389 0.806131 0.77013 0.641063 0.735941 0.695774 0.8101956 0.687733 0.807143 0.830252 0.79083 0.872143 0.743197 0.525714 0.802084 0.69175 0.720884 0.806905 0.708209 0.577764 0.808730 0.91336 0.758154 0.719172 0.549932 0.809340 0.795136 0.782684 0.720761 0.74534 0.77952 0.63095 0.731977 0.67192 0.771111 0.768098 0.765147 0.742710 0.72236 0.81535 3 0.783102 0.757755 0.0159859 6 0.684362 0.619886 0.06447589 0.122443 0.165688 insignificant 1 1 insignificant 5.5209e-01 0.4268146 insignificant 1.0000000 1.0000 insignificant -0.00983176 0.7954150 insignificant 1 insignificant 0.784173 0.72756 0.063335 6 0.725921 0.65001 0.07591226 2.2123e-03 6.0371e-01 weaklyHypermeth 3.6871e-02 1.00000000 weaklyHypermeth 9.6313e-02 0.034699 inconclusive 1.0000e+00 1 insignificant 0.0290308 0.34972007 lowCoverage 1.000000 lowCoverage 0.784173 0.75723 -5.6707e-05 6 0.725921 0.723123 0.0027986 0.5637053 0.5841760 insignificant 1.00000 1.00 insignificant 0.6368906 0.2061854 insignificant 1.00000 1 insignificant -1.9751e-02 0.469373 insignificant 1.00000 insignificant 0.759108 0.72756 0.041975 6 0.741477 0.65001 0.091468 1.3092e-05 1.0624e-01 weaklyHypermeth 3.1172e-04 1.0000000 weaklyHypermeth 1.0099e-02 0.058566 weaklyHypermeth 2.0695e-01 1 insignificant 0.038863 3.0619e-01 lowCoverage 1.0000000 lowCoverage 0.759108 0.75723 -0.0102503 6 0.741477 0.723123 0.01835464 5.2634e-02 1.0330e-01 insignificant 1.0000000 1.000000 insignificant 1.0745e-01 0.120578 insignificant 1.000000 1 insignificant -0.0099194 0.774686 insignificant 1 insignificant 0.72756 0.75723 -0.064491 6 0.65001 0.723123 -0.0731137 0.522317 3.2139e-02 weaklyHypometh 1 4.7969e-01 insignificant 0.24016 2.9598e-01 insignificant 1 1.0000000 insignificant -0.048782 0.09219744 lowCoverage 1.000000 lowCoverage chr7 44914324 44915324 77337 PURB ENSG00000146676 0.699952 153 6 0.557923 133 6 0.579082 110 6 0.699664 145 6 0.669641 68 6 0.70467 249 6 0.682697 93 4 0.792554 136 6 0.696992 102 5 0.7078530 76 6 0.801287 211 6 0.794662 49 4 0.747565 131 6 0.70000 15 2 0.749385 97 6 0.726852 39 3 0.709864 46 3 0.748651 112 5 0.70133 116 6 0.795024 200 6 0.76112 40 3 0.69129 72 6 0.695904 96 6 0.73572 82 4 0.70139 45 5 0.731764 181 6 0.800505 86 4 0.740657 45 4 0.785754 100 6 0.728265 181 6 0.707139 191 6 0.739881 239 6 0.68380 140 6 0.66976 83 6 0.69830 186 6 0.71818 31 3 0.67379 111 6 0.694244 158 6 0.727977 129 6 0.734186 138 6 0.74031 121 6 0.71755 104 6 0.73740 156 6 0.760922 0.560761 0.702097 0.712894 0.695019 0.74381 0.639411 0.785501 0.672286 0.7012788 0.805740 0.734291 0.739626 0.70348 0.808618 0.648832 0.585390 0.712787 0.75663 0.755451 0.789627 0.683906 0.730970 0.749969 0.73627 0.662167 0.747503 0.673468 0.764689 0.736306 0.701791 0.713196 0.61454 0.65891 0.71224 0.820764 0.63203 0.655199 0.768313 0.745820 0.766728 0.74820 0.74289 4 0.724682 0.733432 0.0058355 6 0.734600 0.735251 -0.00065038 0.578008 0.102476 insignificant 1 1 insignificant 8.7743e-01 0.3257129 insignificant 1.0000000 1.0000 insignificant -0.02166653 0.2221556 insignificant 1 insignificant 0.724682 0.67701 0.051681 6 0.734600 0.71514 0.01946207 2.8765e-02 9.5770e-01 weaklyHypermeth 3.6412e-01 1.00000000 insignificant 1.4363e-01 0.917982 insignificant 1.0000e+00 1 insignificant 0.0236027 0.15351814 insignificant 1.000000 insignificant 0.724682 0.72685 -1.1437e-02 6 0.734600 0.722625 0.0119756 0.7082926 0.1875586 insignificant 1.00000 1.00 insignificant 0.6800748 0.1132042 insignificant 1.00000 1 insignificant -1.8201e-02 0.232769 insignificant 1.00000 insignificant 0.733432 0.67701 0.046976 6 0.735251 0.71514 0.020112 4.3967e-03 9.0688e-01 weaklyHypermeth 6.8699e-02 1.0000000 weaklyHypermeth 1.1853e-02 0.972402 weaklyHypermeth 2.2364e-01 1 insignificant 0.045269 2.0589e-03 weaklyHypermeth 0.1020453 insignificant 0.733432 0.72685 -0.0142461 6 0.735251 0.722625 0.01262602 6.0103e-01 2.8150e-01 insignificant 1.0000000 1.000000 insignificant 6.3648e-01 0.285763 insignificant 1.000000 1 insignificant 0.0034652 0.751271 insignificant 1 insignificant 0.67701 0.72685 -0.062576 6 0.71514 0.722625 -0.0074864 0.523442 6.9703e-03 weaklyHypometh 1 1.3151e-01 insignificant 0.78207 2.7019e-02 weaklyHypometh 1 0.5873791 insignificant -0.041804 0.00117761 weaklyHypometh 0.168230 insignificant chr7 55799562 55800562 77511 FKBP9L ENSG00000176826 0.754888 509 15 0.704919 309 15 0.679152 248 15 0.795404 361 15 0.725512 189 15 0.77427 624 15 0.648170 218 15 0.766921 271 15 0.698757 228 15 0.7716232 226 15 0.700657 459 15 0.613470 139 11 0.764920 266 15 0.92000 41 4 0.825778 229 15 0.657991 109 11 0.708723 114 10 0.737823 385 15 0.70381 270 15 0.680893 514 15 0.78469 135 13 0.83615 135 14 0.791924 368 15 0.83166 160 13 0.77626 111 11 0.782978 382 15 0.758049 190 13 0.819539 117 8 0.761372 303 15 0.779982 360 15 0.753767 439 15 0.793862 739 15 0.79909 297 15 0.67600 277 15 0.71393 422 15 0.68537 113 9 0.57399 225 14 0.715385 355 15 0.756986 422 15 0.788026 408 15 0.78077 366 15 0.76485 346 15 0.74263 459 15 0.788921 0.743108 0.691575 0.809304 0.809660 0.78680 0.717904 0.775386 0.743317 0.7929890 0.783070 0.722394 0.759274 0.79890 0.839532 0.703539 0.700945 0.780710 0.77935 0.758721 0.777978 0.814042 0.819742 0.825468 0.79364 0.821753 0.744255 0.796182 0.770336 0.802125 0.765976 0.756381 0.72094 0.65188 0.74673 0.686237 0.65426 0.719358 0.806874 0.798082 0.781412 0.80677 0.76793 10 0.768611 0.788892 -0.0182611 15 0.721385 0.811432 -0.09004687 0.995579 0.041196 weaklyHypometh 1 1 insignificant 9.9825e-01 0.0126035 weaklyHypometh 1.0000000 1.0000 insignificant -0.05750189 0.0026136 weaklyHypometh 1 insignificant 0.768799 0.71818 0.054196 15 0.732454 0.75128 -0.01882667 1.6046e-04 9.3663e-01 weaklyHypermeth 3.5658e-03 1.00000000 weaklyHypermeth 2.1396e-03 0.937431 weaklyHypermeth 5.3490e-02 1 weaklyHypermeth 0.0377241 0.29441092 insignificant 1.000000 insignificant 0.768718 0.77761 -2.2265e-02 15 0.718373 0.766258 -0.0478854 0.9895211 0.2040009 insignificant 1.00000 1.00 insignificant 0.9962163 0.2079270 insignificant 1.00000 1 insignificant -3.4969e-02 0.057252 insignificant 1.00000 insignificant 0.788831 0.71818 0.070892 15 0.802003 0.75128 0.050723 5.4361e-07 9.9999e-01 weaklyHypermeth 1.6819e-05 1.0000000 weaklyHypermeth 1.5332e-04 0.999999 weaklyHypermeth 5.1107e-03 1 weaklyHypermeth 0.095226 2.2912e-02 weaklyHypermeth 0.5328397 insignificant 0.788769 0.77761 -0.0044048 15 0.791583 0.766258 0.02532424 8.3964e-01 8.4569e-01 insignificant 1.0000000 1.000000 insignificant 7.9597e-01 0.958481 insignificant 1.000000 1 insignificant 0.0225333 0.071996 insignificant 1 insignificant 0.71801 0.77761 -0.076242 15 0.73819 0.766258 -0.0280679 0.999000 1.2958e-03 weaklyHypometh 1 4.0495e-02 weaklyHypometh 0.99994 2.1737e-03 weaklyHypometh 1 0.1134918 insignificant -0.072693 0.05897077 insignificant 1.000000 insignificant chr7 56324770 56325770 77537 ENSG00000185290 0.797000 328 9 0.727733 233 9 0.640633 164 9 0.803387 216 9 0.670886 331 9 0.81130 611 9 0.704514 332 9 0.738651 415 9 0.756852 259 9 0.6469820 305 9 0.786370 497 9 0.834544 248 6 0.818684 421 9 0.88000 22 4 0.778696 327 9 0.661774 199 6 0.722596 226 6 0.850314 231 9 0.85768 615 9 0.664707 378 9 0.80655 122 5 0.73987 160 9 0.828704 200 9 0.70075 154 9 0.87115 84 7 0.796639 395 9 0.688527 199 8 0.657395 105 6 0.787738 388 9 0.797021 407 9 0.757510 456 9 0.739857 531 10 0.65541 180 9 0.73356 360 9 0.79128 350 9 0.79715 90 6 0.78181 228 9 0.750175 442 9 0.823594 248 9 0.819836 356 9 0.78084 270 9 0.82445 221 7 0.87090 267 9 0.766716 0.702789 0.697499 0.816389 0.623901 0.76419 0.673903 0.729618 0.691705 0.7187466 0.741192 0.748253 0.744351 0.73603 0.760326 0.634696 0.674005 0.795074 0.75951 0.732727 0.710386 0.750398 0.771768 0.702398 0.81951 0.779217 0.674997 0.698273 0.745785 0.757930 0.741110 0.788242 0.68097 0.62662 0.76308 0.846935 0.68380 0.667488 0.760633 0.767255 0.756336 0.84718 0.83501 6 0.723341 0.758825 -0.0216269 9 0.747072 0.708803 0.03826917 0.565304 0.454978 insignificant 1 1 insignificant 6.7331e-01 0.5461180 insignificant 1.0000000 1.0000 insignificant -0.00664417 0.7891048 insignificant 1 insignificant 0.723545 0.70667 0.032773 9 0.764217 0.76367 0.00054187 1.7954e-02 9.6005e-01 weaklyHypermeth 2.4262e-01 1.00000000 insignificant 1.3915e-01 0.900662 insignificant 1.0000e+00 1 insignificant 0.0061032 0.82800008 insignificant 1.000000 insignificant 0.723579 0.81718 -6.7685e-02 9 0.763032 0.866079 -0.1030469 0.9842305 0.0015529 weaklyHypometh 1.00000 0.96 insignificant 0.9900774 0.0481848 weaklyHypometh 1.00000 1 insignificant -6.6258e-02 0.008344 weaklyHypometh 0.64185 insignificant 0.759398 0.70667 0.054191 9 0.737676 0.76367 -0.025998 9.4573e-03 7.7589e-01 weaklyHypermeth 1.2955e-01 1.0000000 insignificant 1.1398e-01 0.882233 insignificant 1.0000e+00 1 insignificant 0.012747 6.5910e-01 insignificant 1.0000000 insignificant 0.759074 0.81718 -0.0495908 9 0.717870 0.866079 -0.14820883 9.1310e-01 8.0072e-04 weaklyHypometh 1.0000000 0.400359 insignificant 9.6288e-01 0.037596 weaklyHypometh 1.000000 1 insignificant -0.0596143 0.021028 weaklyHypometh 1 insignificant 0.70667 0.81705 -0.101411 9 0.76367 0.853904 -0.0902294 0.999694 1.0360e-03 weaklyHypometh 1 3.6999e-02 weaklyHypometh 0.99981 7.6177e-02 insignificant 1 1.0000000 insignificant -0.072362 0.02289083 weaklyHypometh 0.673260 insignificant chr7 56819923 56820923 77546 ENSG00000213650 0.722594 76 3 0.611444 67 5 0.486472 65 6 0.714264 169 6 0.665625 37 5 0.68078 83 5 0.585119 62 6 0.706187 78 6 0.666667 37 3 0.6488095 54 6 0.696338 185 6 0.600000 18 2 0.669591 56 6 0.69444 22 2 0.644410 46 3 0.652778 20 1 0.555556 11 1 0.874063 61 3 0.55897 69 6 0.703728 38 3 0.72173 38 2 0.69788 69 6 0.701901 76 6 0.43065 61 6 0.50267 112 6 0.695591 130 6 0.606499 49 5 0.404762 45 4 0.394610 80 6 0.556916 143 6 0.622176 97 6 0.618040 100 5 0.54043 77 5 0.57532 75 6 0.52699 89 5 0.36277 42 1 0.30859 92 6 0.481757 128 6 0.619029 91 6 0.632228 105 6 0.64362 118 6 0.78571 32 2 0.54388 157 6 0.756426 0.673037 0.642027 0.739655 0.764851 0.69429 0.655233 0.747450 0.834983 0.7035007 0.719488 0.702970 0.720471 0.71122 0.709058 0.756601 0.697702 0.801883 0.61874 0.737689 0.789958 0.740132 0.758052 0.666431 0.72663 0.739798 0.561060 0.657709 0.557317 0.687687 0.676309 0.626154 0.54735 0.68299 0.65735 0.588678 0.48577 0.722303 0.685938 0.715991 0.730910 0.84441 0.63288 1 0.718501 0.695000 0.0256184 6 0.618633 0.560019 0.05861394 0.150743 0.810745 insignificant 1 1 insignificant 9.7820e-02 0.8322005 insignificant 1.0000000 1.0000 insignificant 0.07744064 0.0646384 lowCoverage 1 lowCoverage 0.718501 0.62624 0.108243 6 0.618633 0.43526 0.18336779 1.8072e-03 9.9907e-01 weaklyHypermeth 3.0631e-02 1.00000000 weaklyHypermeth 1.9437e-03 0.999911 weaklyHypermeth 4.9839e-02 1 weaklyHypermeth 0.1909152 0.00516443 lowCoverage 0.271268 lowCoverage 0.720257 0.71968 2.3656e-02 6 0.658177 0.617057 0.0411199 0.0435796 0.5662147 weaklyHypermeth 1.00000 1.00 insignificant 0.2379849 0.4879096 insignificant 1.00000 1 insignificant 1.1999e-02 0.790854 lowCoverage 1.00000 lowCoverage 0.695000 0.62624 0.100377 6 0.560019 0.43526 0.124754 2.3920e-03 9.8000e-01 weaklyHypermeth 3.9866e-02 1.0000000 weaklyHypermeth 1.5604e-02 0.986431 weaklyHypermeth 2.7864e-01 1 insignificant 0.113475 6.5907e-02 lowCoverage 1.0000000 lowCoverage 0.702758 0.71968 0.0119781 6 0.640210 0.617057 0.02315321 2.3866e-01 3.6582e-01 insignificant 1.0000000 1.000000 insignificant 3.5531e-01 0.242189 insignificant 1.000000 1 insignificant -0.0654414 0.239833 insignificant 1 insignificant 0.63765 0.71968 -0.084250 6 0.58035 0.617057 -0.0367038 0.399829 8.2059e-02 insignificant 1 9.8867e-01 insignificant 0.80912 4.5388e-02 weaklyHypometh 1 0.8518926 insignificant -0.178916 0.01378002 lowCoverage 0.503271 lowCoverage chr7 57029012 57030012 77551 ENSG00000203451 0.871033 338 11 0.765216 217 8 0.558676 154 8 0.839632 275 12 0.691556 149 4 0.82179 620 12 0.843457 141 8 0.891799 149 6 0.765015 139 6 0.7201555 141 5 0.823673 357 9 0.809957 49 4 0.695505 115 6 0.83633 108 4 0.910373 187 6 0.958333 37 4 0.000000 1 0 0.774577 445 10 0.83278 388 11 0.834274 365 6 0.81208 64 6 0.67525 51 4 0.932208 237 11 0.85187 91 6 0.88889 52 3 0.894164 288 8 0.721360 258 6 0.874925 86 6 0.829166 262 5 0.763796 325 11 0.799210 291 7 0.813847 445 12 0.53895 229 8 0.49705 317 6 0.69300 301 12 0.80012 388 9 0.46001 270 8 0.716932 443 13 0.837235 466 13 0.858671 292 12 0.74000 291 10 0.81231 567 10 0.78618 386 11 0.783305 0.737778 0.564768 0.869544 0.781443 0.84767 0.852063 0.803036 0.712077 0.8384125 0.771837 0.708090 0.801733 0.78829 0.854795 0.993119 NA 0.797627 0.78536 0.785576 0.858219 0.760959 0.833387 0.800530 0.83486 0.846725 0.758937 0.864089 0.819640 0.763449 0.781052 0.860975 0.50792 0.39883 0.65116 0.752125 0.46127 0.769564 0.750100 0.795016 0.697103 0.77338 0.77997 4 0.787886 0.813317 -0.0202714 6 0.734360 0.849306 -0.11494562 0.997432 0.364862 insignificant 1 1 insignificant 9.9068e-01 0.4294725 insignificant 1.0000000 1.0000 insignificant -0.05919076 0.2439147 insignificant 1 insignificant 0.787886 0.65229 0.221879 7 0.734360 0.55848 0.17588366 6.1001e-14 9.6110e-01 hypermethylated 4.0668e-12 1.00000000 hypermethylated 2.1868e-05 0.999800 hypermethylated 1.0413e-03 1 hypermethylated 0.1445309 0.06678205 insignificant 1.000000 insignificant 0.788017 0.78389 2.8972e-02 7 0.765608 0.787410 -0.0218021 0.4057234 0.1952851 insignificant 1.00000 1.00 insignificant 0.2443096 0.8828606 insignificant 1.00000 1 insignificant -4.4674e-02 0.374054 insignificant 1.00000 insignificant 0.813317 0.65229 0.248019 6 0.849306 0.55848 0.290829 2.3945e-14 9.9697e-01 hypermethylated 3.9908e-12 1.0000000 hypermethylated 7.7021e-06 0.999997 hypermethylated 6.4184e-04 1 hypermethylated 0.203722 1.2923e-02 weaklyHypermeth 0.3589686 insignificant 0.813164 0.78400 0.0501660 6 0.829471 0.800697 0.02877360 7.1429e-02 6.2277e-01 insignificant 1.0000000 1.000000 insignificant 8.7152e-02 0.973951 insignificant 1.000000 1 insignificant 0.0145168 0.635378 insignificant 1 insignificant 0.65329 0.78389 -0.149285 11 0.63294 0.787410 -0.1544702 0.999361 2.8420e-06 weaklyHypometh 1 1.7762e-04 weaklyHypometh 0.99468 4.1977e-03 weaklyHypometh 1 0.1499179 insignificant -0.189205 0.01819385 weaklyHypometh 0.627374 insignificant chr7 57072298 57073298 77552 ENSG00000203451 0.766296 294 12 0.727323 341 10 0.713683 295 9 0.652734 316 12 0.804322 241 9 0.75679 619 11 0.724315 266 10 0.762140 308 11 0.725750 225 9 0.8717939 196 9 0.814615 410 12 0.853096 164 11 0.795477 279 11 0.59185 150 6 0.692646 339 9 0.818218 192 11 0.769068 58 5 0.814338 401 14 0.73001 499 9 0.686018 439 11 0.65865 128 9 0.80066 115 8 0.709981 330 12 0.77623 162 9 0.86111 67 6 0.725881 416 11 0.750977 216 9 0.656884 159 10 0.759134 325 9 0.718850 449 12 0.790669 419 11 0.837391 559 14 0.61356 365 9 0.62630 209 9 0.56833 208 8 0.68704 31 2 0.54377 331 9 0.697689 514 14 0.763549 408 12 0.730314 461 12 0.81056 314 12 0.70755 326 12 0.80425 452 14 0.867769 0.820918 0.695699 0.871066 0.868291 0.81433 0.800918 0.865189 0.823745 0.8838270 0.890683 0.792963 0.850492 0.87004 0.869265 0.847749 0.857989 0.856652 0.82432 0.810932 0.850433 0.894284 0.819794 0.863641 0.85334 0.866290 0.794773 0.789625 0.814867 0.850512 0.860898 0.895449 0.70688 0.61230 0.72261 0.688935 0.63142 0.689483 0.788210 0.815726 0.857402 0.87732 0.84215 8 0.806366 0.814350 -0.0101809 9 0.747860 0.737817 0.01004243 0.737596 0.364967 insignificant 1 1 insignificant 6.3174e-01 0.4013152 insignificant 1.0000000 1.0000 insignificant -0.00034440 0.9886645 insignificant 1 insignificant 0.806366 0.65983 0.144107 9 0.747860 0.61277 0.13508769 8.3183e-17 9.9999e-01 weaklyHypermeth 8.3183e-15 1.00000000 weaklyHypermeth 1.3938e-08 0.999978 weaklyHypermeth 4.6459e-06 1 weaklyHypermeth 0.1307427 0.00161318 weaklyHypermeth 0.145695 insignificant 0.806971 0.78378 2.3418e-03 9 0.780870 0.790653 -0.0097827 0.4335684 0.1412511 insignificant 1.00000 1.00 insignificant 0.2902631 0.4367437 insignificant 1.00000 1 insignificant -9.7204e-03 0.709521 insignificant 1.00000 insignificant 0.814350 0.65983 0.154777 10 0.737817 0.61277 0.125045 3.5459e-12 1.0000e+00 weaklyHypermeth 2.7276e-10 1.0000000 weaklyHypermeth 8.9248e-07 0.999861 weaklyHypermeth 1.1894e-04 1 weaklyHypermeth 0.131087 1.6724e-03 weaklyHypermeth 0.0983788 weaklyHypermeth 0.815813 0.78378 0.0103633 10 0.790519 0.790653 -0.00013425 2.3562e-01 2.2192e-01 insignificant 1.0000000 1.000000 insignificant 4.0095e-01 0.816840 insignificant 1.000000 1 insignificant -0.0093760 0.737982 insignificant 1 insignificant 0.66063 0.78378 -0.140314 11 0.65654 0.790653 -0.1341113 0.999861 2.1653e-08 weaklyHypometh 1 3.6089e-06 weaklyHypometh 0.99962 6.3354e-06 weaklyHypometh 1 0.0031677 weaklyHypometh -0.140463 0.00188941 weaklyHypometh 0.186647 insignificant chr7 57074823 57075823 77553 ENSG00000203451 0.923216 739 30 0.843661 365 17 0.634976 421 21 0.741764 604 18 0.871841 339 17 0.85483 777 30 0.754988 346 19 0.829703 377 22 0.693241 361 22 0.9035609 444 24 0.889579 542 26 0.830157 287 26 0.870801 471 19 0.88414 202 9 0.843631 480 19 0.833790 196 14 0.756208 150 10 0.832642 846 25 0.81594 587 24 0.886765 506 25 0.75372 156 14 0.81178 289 17 0.864383 389 30 0.61504 144 10 0.82041 168 15 0.882527 426 24 0.715871 376 21 0.589307 134 12 0.789317 429 18 0.884914 378 14 0.777458 373 22 0.865697 585 28 0.76841 464 29 0.66087 622 25 0.74656 508 21 0.74038 112 8 0.63212 252 24 0.835931 471 28 0.862583 663 27 0.845753 753 21 0.79587 598 19 0.88968 690 18 0.84031 701 25 0.899507 0.798479 0.584481 0.916888 0.908267 0.84370 0.848730 0.841653 0.814958 0.9068878 0.886650 0.849224 0.860098 0.85363 0.889312 0.794987 0.831224 0.848397 0.85664 0.865355 0.770392 0.766843 0.858029 0.803292 0.90291 0.903900 0.840168 0.784411 0.836688 0.884398 0.819530 0.892426 0.76254 0.65449 0.69856 0.698261 0.63076 0.834379 0.853269 0.880735 0.798977 0.88526 0.86289 5 0.850868 0.852489 -0.0010624 16 0.821506 0.782442 0.03906405 0.272801 0.697487 insignificant 1 1 insignificant 1.8847e-01 0.6771676 insignificant 1.0000000 1.0000 insignificant 0.04390365 0.1985453 insignificant 1 insignificant 0.850852 0.74063 0.110261 19 0.816407 0.74270 0.07370234 4.8732e-15 1.0000e+00 weaklyHypermeth 3.7486e-13 1.00000000 weaklyHypermeth 5.7796e-08 0.999996 weaklyHypermeth 1.4449e-05 1 weaklyHypermeth 0.0940602 0.02516796 weaklyHypermeth 0.699110 insignificant 0.851446 0.84426 6.8004e-03 16 0.833073 0.860569 -0.0274958 0.3307965 0.5525181 insignificant 1.00000 1.00 insignificant 0.1847688 0.6725291 insignificant 1.00000 1 insignificant -2.2069e-02 0.343838 insignificant 1.00000 insignificant 0.853156 0.74063 0.109806 19 0.804798 0.74270 0.062094 1.0350e-09 9.9991e-01 weaklyHypermeth 4.3125e-08 1.0000000 weaklyHypermeth 9.1265e-06 0.999630 weaklyHypermeth 7.0204e-04 1 weaklyHypermeth 0.050157 2.4862e-01 insignificant 1.0000000 insignificant 0.852818 0.84401 0.0024993 15 0.790512 0.846283 -0.05577116 8.0116e-01 6.4273e-01 insignificant 1.0000000 1.000000 insignificant 5.5968e-01 0.518182 insignificant 1.000000 1 insignificant -0.0659725 0.059706 insignificant 1 insignificant 0.74031 0.84421 -0.111118 16 0.73514 0.856468 -0.1213314 0.999999 1.8688e-07 weaklyHypometh 1 1.5573e-05 weaklyHypometh 1.00000 5.1230e-05 weaklyHypometh 1 0.0090419 weaklyHypometh -0.116129 0.01037699 weaklyHypometh 0.451174 insignificant chr7 57081194 57082194 77554 TNRC18C ENSG00000189166 0.858985 211 10 0.882501 130 8 0.637744 153 8 0.912409 207 10 0.848765 84 7 0.86407 322 11 0.748511 113 4 0.788071 135 7 0.842670 100 7 0.8181980 102 10 0.893904 214 11 0.876529 59 4 0.763736 116 7 0.84375 24 2 0.857203 95 4 0.854545 76 7 0.773205 45 3 0.797004 294 10 0.65242 150 7 0.778571 287 12 0.83868 84 6 0.68593 156 10 0.874598 175 10 0.85017 63 4 0.85029 74 5 0.839319 178 11 0.756318 109 6 0.754167 68 4 0.594711 114 7 0.893249 183 8 0.745555 216 11 0.878403 308 12 0.74071 156 8 0.50287 120 4 0.56016 171 8 0.55522 54 6 0.64436 174 7 0.769190 216 11 0.719746 320 10 0.791247 236 11 0.77691 193 10 0.85294 239 10 0.79489 345 10 0.815609 0.827960 0.618440 0.883605 0.737269 0.84002 0.718243 0.822115 0.909933 0.8374014 0.825615 0.878941 0.829424 0.83710 0.780628 0.883150 0.776881 0.789309 0.62885 0.730995 0.863381 0.711920 0.860734 0.886498 0.95256 0.860417 0.786357 0.885548 0.619474 0.762432 0.824341 0.820438 0.60664 0.43541 0.32554 0.461827 0.59765 0.654016 0.825338 0.737483 0.700954 0.87850 0.77962 4 0.798628 0.810185 -0.0098676 10 0.737040 0.756538 -0.01949856 0.670841 0.671058 insignificant 1 1 insignificant 7.9771e-01 0.7461759 insignificant 1.0000000 1.0000 insignificant 0.01785663 0.5705326 insignificant 1 insignificant 0.798423 0.60831 0.181416 7 0.721237 0.67316 0.04808212 2.4285e-07 9.9675e-01 weaklyHypermeth 7.1425e-06 1.00000000 weaklyHypermeth 2.0254e-06 0.999316 weaklyHypermeth 1.9634e-04 1 weaklyHypermeth 0.1858847 0.00653907 weaklyHypermeth 0.311384 insignificant 0.798902 0.79070 4.9315e-03 10 0.793735 0.789391 0.0043445 0.2746208 0.6061589 insignificant 1.00000 1.00 insignificant 0.5221675 0.7928537 insignificant 1.00000 1 insignificant 2.7493e-02 0.332449 insignificant 1.00000 insignificant 0.810185 0.60899 0.188519 8 0.756538 0.72124 0.035301 1.3351e-06 8.5584e-01 weaklyHypermeth 3.9267e-05 1.0000000 weaklyHypermeth 9.5149e-07 0.961840 weaklyHypermeth 1.1894e-04 1 weaklyHypermeth 0.168028 1.0149e-02 weaklyHypermeth 0.3499765 insignificant 0.812682 0.79054 0.0164943 10 0.817152 0.771840 0.04531201 2.9146e-01 7.0539e-01 insignificant 1.0000000 1.000000 insignificant 3.9488e-01 0.895349 insignificant 1.000000 1 insignificant 0.0096361 0.779419 insignificant 1 insignificant 0.60654 0.79070 -0.176547 7 0.62287 0.789391 -0.1665195 0.993011 4.8440e-03 weaklyHypometh 1 1.0092e-01 insignificant 0.99947 3.4477e-04 weaklyHypometh 1 0.0313430 weaklyHypometh -0.158392 0.01409158 weaklyHypometh 0.503271 insignificant chr7 57085527 57086527 77556 TNRC18C ENSG00000189166 0.869230 241 5 0.955357 53 5 0.595008 105 5 0.839924 124 6 0.834416 59 6 0.88178 132 4 0.905556 39 2 0.768597 83 6 0.854545 56 5 0.8935574 67 5 0.886485 78 4 0.777778 22 1 0.890637 108 6 0.95658 94 6 0.892491 71 6 0.583333 38 4 NA 0 0 0.795736 252 5 0.76208 127 4 0.838746 67 4 0.92593 33 3 0.75000 4 0 0.953953 185 5 0.90000 18 3 1.00000 4 0 0.953846 56 5 0.900000 16 0 0.700000 25 4 0.790404 75 6 1.000000 35 4 0.823269 124 4 0.713068 130 4 0.84642 152 6 0.63750 47 3 0.40000 99 5 1.00000 19 1 0.75463 44 3 0.818306 159 4 0.893755 178 5 0.851128 247 5 0.86567 148 5 0.71322 256 5 0.90673 201 5 0.913500 0.967742 0.552229 0.838114 0.893276 0.85126 0.854839 0.804121 0.810117 0.8407427 0.885384 0.741935 0.837093 0.93603 0.905884 0.366935 NA 0.851814 0.70166 0.836568 0.887097 0.758065 0.931205 0.896774 1.00000 0.942928 0.870968 0.545161 0.703533 1.000000 0.820239 0.889575 0.85736 0.63790 0.50000 1.000000 0.70968 0.815489 0.861636 0.845194 0.806250 0.81725 0.89148 0 0.844163 0.887943 -0.0441133 5 0.847290 0.907947 -0.06065705 0.995932 0.011886 weaklyHypometh 1 1 insignificant 9.9558e-01 0.0005319 weaklyHypometh 1.0000000 0.5319 insignificant -0.03691602 0.3540294 lowCoverage 1 lowCoverage 0.844163 0.72115 0.135431 5 0.847290 0.71115 0.13613722 2.8787e-04 9.3776e-01 weaklyHypermeth 5.6445e-03 1.00000000 weaklyHypermeth 9.2531e-02 0.708074 insignificant 1.0000e+00 1 insignificant 0.0878129 0.35364112 lowCoverage 1.000000 lowCoverage 0.844163 0.86214 -8.4620e-03 5 0.847290 0.861516 -0.0142255 0.8353921 0.4817058 insignificant 1.00000 1.00 insignificant 0.6133279 0.7347033 insignificant 1.00000 1 insignificant -1.5478e-02 0.720410 lowCoverage 1.00000 lowCoverage 0.887943 0.72115 0.182335 5 0.907947 0.71115 0.196794 2.3431e-04 9.9957e-01 weaklyHypermeth 4.6861e-03 1.0000000 weaklyHypermeth 1.1027e-02 0.989283 weaklyHypermeth 2.2054e-01 1 insignificant 0.124729 2.1002e-01 lowCoverage 1.0000000 lowCoverage 0.887943 0.86214 0.0355780 5 0.907947 0.861516 0.04643151 8.8783e-02 9.8143e-01 insignificant 1.0000000 1.000000 insignificant 3.5175e-03 0.997449 weaklyHypermeth 0.251252 1 insignificant 0.0214381 0.655331 lowCoverage 1 lowCoverage 0.72115 0.86214 -0.138444 5 0.71115 0.861516 -0.1503628 0.985182 3.5321e-02 weaklyHypometh 1 5.1942e-01 insignificant 0.95269 1.7723e-01 insignificant 1 1.0000000 insignificant -0.103291 0.29486287 lowCoverage 1.000000 lowCoverage chr7 57258994 57259994 77563 ENSG00000210923,ENSG00000210926,ENSG00000210939,ENSG00000210941,ENSG00000210949 0.927436 103 5 0.772357 118 4 0.570949 100 5 0.902491 122 5 0.655794 58 5 0.71146 261 5 0.555250 55 4 0.779444 54 5 0.617662 86 3 0.6651661 68 4 0.935673 74 5 0.750000 39 3 0.863095 75 5 0.51474 45 4 0.816609 75 4 0.803846 58 4 0.544048 21 2 0.795238 61 5 0.86667 12 0 0.857181 145 5 0.45833 9 0 0.94444 42 5 0.764957 51 4 0.77340 51 4 0.62338 27 2 0.886107 94 5 0.828333 33 4 0.827381 34 4 0.377778 36 6 0.894388 85 5 0.689262 83 5 0.863949 187 5 0.57626 98 5 0.39667 17 1 0.72321 71 3 0.75694 21 2 0.43689 115 5 0.590977 94 5 0.693007 74 5 0.815000 68 5 0.60038 74 5 0.66667 26 4 0.82806 110 5 0.892530 0.927349 0.583229 0.888682 0.838244 0.87301 0.816826 0.825402 0.728595 0.7708650 0.922469 0.901886 0.886116 0.74750 0.844505 0.865153 0.691222 0.892369 0.85542 0.839513 0.818782 0.943775 0.929719 0.825031 0.87952 0.895732 0.817369 0.894578 0.431727 0.902038 0.806260 0.850423 0.73299 0.31124 0.85738 0.760040 0.58318 0.688427 0.681128 0.796988 0.724645 0.82995 0.84096 1 0.841007 0.826923 -0.0048300 5 0.707136 0.608997 0.09813854 0.870104 0.863667 insignificant 1 1 insignificant 8.2663e-01 0.5292278 insignificant 1.0000000 1.0000 insignificant 0.00094635 0.9874381 lowCoverage 1 lowCoverage 0.841007 0.71325 0.124057 4 0.707136 0.54571 0.16142207 1.1235e-03 9.9999e-01 lowCoverage 2.0063e-02 1.00000000 lowCoverage 3.6109e-02 0.999997 lowCoverage 6.2256e-01 1 lowCoverage 0.1650973 0.03910522 lowCoverage 0.853767 lowCoverage 0.846393 0.81818 4.3582e-02 5 0.781264 0.654174 0.1270896 0.0034424 0.9385006 weaklyHypermeth 0.24589 1.00 insignificant 0.0056714 0.9627088 weaklyHypermeth 0.47262 1 insignificant 2.4633e-02 0.655061 lowCoverage 1.00000 lowCoverage 0.826265 0.71154 0.125732 4 0.613803 0.50024 0.113565 1.0214e-02 9.8340e-01 lowCoverage 1.3802e-01 1.0000000 lowCoverage 5.6412e-02 0.999821 lowCoverage 7.4227e-01 1 lowCoverage 0.164151 5.8108e-02 lowCoverage 1.0000000 lowCoverage 0.832636 0.81818 0.0469511 5 0.741494 0.654174 0.08732043 2.2588e-02 8.7077e-01 weaklyHypermeth 0.8366031 1.000000 insignificant 9.0529e-03 0.935347 weaklyHypermeth 0.474313 1 insignificant 0.0236866 0.730981 lowCoverage 1 lowCoverage 0.72388 0.81818 -0.071768 4 0.68103 0.654174 0.0268562 0.678982 1.3679e-02 lowCoverage 1 2.3185e-01 lowCoverage 0.81431 7.9682e-02 lowCoverage 1 1.0000000 lowCoverage -0.140464 0.09095814 lowCoverage 1.000000 lowCoverage chr7 57410528 57411528 77567 ENSG00000211013 0.717893 84 3 0.596729 157 8 0.590826 105 6 0.849197 150 3 0.840278 70 5 0.69291 173 5 0.665664 90 6 0.864647 154 6 0.735832 105 5 0.7649573 49 4 0.697190 137 6 0.796758 74 5 0.768413 56 5 0.83333 14 2 0.891234 53 4 0.792735 67 4 0.891667 50 4 0.884425 163 3 0.69525 135 6 0.800075 100 3 0.65748 73 3 0.61111 13 1 0.875687 96 6 0.68364 56 6 0.72613 77 3 0.894379 271 6 0.787037 58 6 0.707875 59 4 0.740196 131 6 0.791667 39 4 0.682762 263 8 0.905669 173 6 0.39912 253 6 0.61661 152 6 0.68278 575 6 0.84091 17 1 0.70220 55 4 0.603270 317 6 0.835151 142 6 0.758993 153 6 0.75388 259 3 0.85342 73 5 0.63484 131 3 0.816195 0.785980 0.612060 0.853695 0.686703 0.75042 0.761099 0.766230 0.698695 0.6399748 0.678217 0.734855 0.580601 0.96010 0.736640 0.685162 0.795628 0.814495 0.52969 0.702368 0.723203 0.604031 0.811475 0.714481 0.61967 0.836445 0.653916 0.599351 0.610897 0.614754 0.579288 0.843024 0.44127 0.43927 0.71479 0.606160 0.52945 0.669696 0.778081 0.725545 0.678624 0.85221 0.78698 1 0.761329 0.771581 -0.0214640 6 0.642627 0.786386 -0.14375902 0.961484 0.120413 insignificant 1 1 insignificant 4.5659e-01 0.0281535 weaklyHypometh 1.0000000 1.0000 insignificant 0.01319749 0.7076284 lowCoverage 1 lowCoverage 0.761329 0.59094 0.142713 6 0.642627 0.50123 0.14139873 5.4981e-05 9.9993e-01 weaklyHypermeth 1.3091e-03 1.00000000 weaklyHypermeth 3.0990e-03 0.998178 weaklyHypermeth 7.3786e-02 1 weaklyHypermeth 0.1276857 0.08682735 lowCoverage 1.000000 lowCoverage 0.761329 0.69525 2.5843e-02 4 0.642627 0.729915 -0.0872871 0.5632036 0.0405389 lowCoverage 1.00000 1.00 lowCoverage 0.7687914 0.1070200 lowCoverage 1.00000 1 lowCoverage 1.2435e-03 0.978203 lowCoverage 1.00000 lowCoverage 0.771581 0.59094 0.189731 6 0.786386 0.50123 0.285158 1.8970e-06 9.9987e-01 weaklyHypermeth 5.4199e-05 1.0000000 weaklyHypermeth 6.6430e-04 0.995930 weaklyHypermeth 1.8453e-02 1 weaklyHypermeth 0.114488 1.2307e-01 lowCoverage 1.0000000 lowCoverage 0.771581 0.69525 0.0577743 4 0.786386 0.729915 0.05647190 2.2408e-02 5.8492e-01 lowCoverage 0.8366031 1.000000 lowCoverage 2.3847e-01 0.374660 lowCoverage 1.000000 1 lowCoverage -0.0119540 0.807896 lowCoverage 1 lowCoverage 0.59094 0.69525 -0.150595 4 0.50123 0.729915 -0.2286859 0.999935 1.9922e-03 lowCoverage 1 5.6919e-02 lowCoverage 0.99980 2.2986e-03 lowCoverage 1 0.1134918 lowCoverage -0.126442 0.11104011 lowCoverage 1.000000 lowCoverage chr7 62663786 62664786 77597 ENSG00000214660 0.694087 72 9 0.742265 113 8 0.510000 69 4 0.708916 131 8 0.641667 33 3 0.78253 154 9 0.608225 48 6 0.683730 94 9 0.604861 42 3 0.6931818 61 7 0.755354 150 10 0.541667 8 0 0.745455 91 9 0.57639 31 3 0.650000 42 3 0.000000 8 0 1.000000 1 0 0.786364 70 6 0.69610 79 7 0.711708 110 10 0.63542 41 4 0.71786 29 4 0.784848 68 7 0.72189 40 4 0.77104 35 2 0.774703 176 9 0.662381 48 6 0.587302 17 1 0.778591 66 6 0.766066 145 9 0.756557 114 9 0.754405 125 10 0.56170 92 9 0.51277 57 5 0.61383 152 9 0.50000 17 0 0.55344 92 8 0.659724 108 9 0.599246 74 9 0.723939 98 10 0.69756 99 9 0.56111 37 2 0.76367 117 8 0.602243 0.596618 0.301449 0.673913 0.800725 0.69353 0.484472 0.549689 0.393471 0.4565217 0.693417 0.353616 0.509317 0.56014 0.413043 0.078254 NA 0.739130 0.87822 0.645153 0.423913 0.552211 0.615942 0.571805 0.46640 0.538037 0.602484 0.409938 0.583851 0.696618 0.593757 0.611232 0.48480 0.31449 0.34908 0.086957 0.30998 0.475642 0.611939 0.781291 0.615217 0.41546 0.63337 0 0.712154 0.755260 -0.0440197 9 0.691733 0.687337 0.00439647 0.954545 0.020813 weaklyHypometh 1 1 insignificant 9.8114e-01 0.0136839 weaklyHypometh 1.0000000 1.0000 insignificant -0.06929642 0.1420737 insignificant 1 insignificant 0.712251 0.63514 0.079305 9 0.693822 0.59001 0.10381067 1.2325e-03 9.6548e-01 weaklyHypermeth 2.1623e-02 1.00000000 weaklyHypermeth 1.4304e-02 0.998778 weaklyHypermeth 2.6988e-01 1 insignificant 0.0897134 0.07745626 insignificant 1.000000 insignificant 0.712446 0.71765 -1.3405e-03 8 0.699253 0.678775 0.0204785 0.5976467 0.7050390 insignificant 1.00000 1.00 insignificant 0.4442761 0.7083806 insignificant 1.00000 1 insignificant -1.2480e-02 0.828731 insignificant 1.00000 insignificant 0.754444 0.63514 0.124379 9 0.661281 0.59001 0.071270 5.5504e-07 9.9999e-01 weaklyHypermeth 1.6819e-05 1.0000000 weaklyHypermeth 5.5916e-05 1.000000 weaklyHypermeth 2.7868e-03 1 weaklyHypermeth 0.159010 3.6038e-04 weaklyHypermeth 0.0240252 weaklyHypermeth 0.757542 0.71765 0.0472569 8 0.743538 0.678775 0.06476310 4.2990e-03 9.5287e-01 weaklyHypermeth 0.1954079 1.000000 insignificant 6.4826e-03 0.980773 weaklyHypermeth 0.399255 1 insignificant 0.0568165 0.230279 insignificant 1 insignificant 0.63566 0.71765 -0.083346 8 0.60801 0.678775 -0.0707610 0.939083 6.7658e-03 weaklyHypometh 1 1.3011e-01 insignificant 0.99077 1.7977e-02 weaklyHypometh 1 0.4720117 insignificant -0.102193 0.05964759 insignificant 1.000000 insignificant chr7 62664183 62665183 77598 ENSG00000214660 0.779257 212 9 0.817793 137 8 0.542778 220 10 0.862161 273 9 0.794766 77 9 0.85020 373 10 0.761641 139 4 0.857454 163 9 0.698384 105 6 0.6738494 133 9 0.863376 275 12 0.868056 75 4 0.842023 179 9 0.83333 23 2 0.771064 136 6 0.584127 45 4 0.397378 48 3 0.857027 262 9 0.71958 163 9 0.736357 281 11 0.76310 101 9 0.67760 144 10 0.896916 207 11 0.91364 100 7 0.87334 99 6 0.862776 216 9 0.758275 159 10 0.681129 56 5 0.806057 144 6 0.753512 246 10 0.821926 224 9 0.832156 301 11 0.55398 168 10 0.56752 167 9 0.56218 279 10 0.68333 70 5 0.66850 214 10 0.670277 256 10 0.724668 238 9 0.794425 304 10 0.76151 208 9 0.77234 234 6 0.69514 274 9 0.775366 0.836319 0.596035 0.907736 0.829748 0.78216 0.746539 0.867217 0.700694 0.7779036 0.829610 0.818024 0.743007 0.81652 0.879894 0.753868 0.536861 0.787061 0.71171 0.762052 0.878571 0.721839 0.865226 0.870942 0.85627 0.779413 0.792697 0.810403 0.654537 0.762788 0.763171 0.810339 0.51958 0.41899 0.46226 0.504464 0.61847 0.599475 0.693283 0.736960 0.656735 0.82266 0.71943 4 0.795119 0.810336 -0.0205485 9 0.757440 0.781173 -0.02373285 0.959003 0.024843 weaklyHypometh 1 1 insignificant 9.8079e-01 0.0343570 weaklyHypometh 1.0000000 1.0000 insignificant -0.04783796 0.1944877 insignificant 1 insignificant 0.795297 0.61372 0.177620 9 0.777244 0.59554 0.18170711 1.9809e-09 9.9970e-01 weaklyHypermeth 7.9235e-08 1.00000000 weaklyHypermeth 9.4793e-06 0.999952 weaklyHypermeth 5.7420e-04 1 weaklyHypermeth 0.1378991 0.00189403 weaklyHypermeth 0.145695 insignificant 0.795413 0.75755 3.5391e-02 9 0.786458 0.748551 0.0379070 0.1484377 0.8406815 insignificant 1.00000 1.00 insignificant 0.0586298 0.9749232 insignificant 1.00000 1 insignificant 5.9141e-03 0.860244 insignificant 1.00000 insignificant 0.810241 0.61372 0.190750 9 0.764340 0.59554 0.168804 3.3595e-11 1.0000e+00 weaklyHypermeth 2.2397e-09 1.0000000 weaklyHypermeth 5.1320e-08 1.000000 weaklyHypermeth 2.0432e-05 1 weaklyHypermeth 0.185737 1.2428e-04 weaklyHypermeth 0.0112982 weaklyHypermeth 0.811463 0.75755 0.0520349 9 0.828035 0.748551 0.07948422 7.9515e-05 9.9928e-01 weaklyHypermeth 0.0066262 1.000000 weaklyHypermeth 5.8928e-05 0.999951 weaklyHypermeth 0.009254 1 weaklyHypermeth 0.0537521 0.081965 insignificant 1 insignificant 0.61425 0.75755 -0.133420 9 0.64516 0.748551 -0.1033868 0.997947 1.1284e-03 weaklyHypometh 1 3.7612e-02 weaklyHypometh 0.99981 2.9049e-03 weaklyHypometh 1 0.1262998 insignificant -0.131985 0.00236451 weaklyHypometh 0.186647 insignificant chr7 62673071 62674071 77599 ENSG00000214660 0.802758 704 17 0.815635 670 13 0.680913 582 14 0.835700 695 17 0.822366 385 16 0.85502 915 17 0.830577 593 15 0.820842 523 15 0.761701 499 13 0.8335707 380 13 0.857466 723 17 0.805043 411 13 0.783883 595 15 0.81425 433 10 0.744691 775 13 0.828092 338 12 0.754549 3293 7 0.775005 548 17 0.84167 498 14 0.832119 702 14 0.86800 242 14 0.80263 370 14 0.839973 518 14 0.90910 295 14 0.87861 243 14 0.811157 546 14 0.738536 325 12 0.844323 229 10 0.794468 447 12 0.863611 664 17 0.785714 557 14 0.834519 724 15 0.76530 653 14 0.70076 308 14 0.71818 255 13 0.66411 111 7 0.66938 530 14 0.708229 587 17 0.813288 621 17 0.819919 734 17 0.77465 458 17 0.83071 485 17 0.82307 512 17 0.898807 0.853437 0.778487 0.882522 0.889026 0.89733 0.882127 0.861901 0.846240 0.8678006 0.898102 0.886621 0.826174 0.89007 0.860430 0.864513 0.844162 0.850477 0.84073 0.843162 0.907867 0.858807 0.865984 0.925206 0.89698 0.849903 0.822001 0.882461 0.876442 0.881363 0.824464 0.888210 0.78005 0.70667 0.72430 0.680777 0.75189 0.744101 0.855958 0.848238 0.827466 0.87443 0.85078 12 0.854298 0.861240 -0.0132604 14 0.802652 0.832522 -0.02987058 0.550295 0.016215 weaklyHypometh 1 1 insignificant 9.1211e-01 0.0382908 weaklyHypometh 1.0000000 1.0000 insignificant -0.02609375 0.1317124 insignificant 1 insignificant 0.854298 0.72627 0.118207 14 0.802652 0.70360 0.09904821 1.2213e-17 9.9985e-01 weaklyHypermeth 2.4425e-15 1.00000000 weaklyHypermeth 1.6183e-07 0.999998 weaklyHypermeth 3.2366e-05 1 weaklyHypermeth 0.1004683 0.00025853 weaklyHypermeth 0.033717 weaklyHypermeth 0.854298 0.82384 1.9082e-03 14 0.802652 0.811445 -0.0087931 0.4604465 0.2208424 insignificant 1.00000 1.00 insignificant 0.3422217 0.4193150 insignificant 1.00000 1 insignificant -7.5337e-03 0.594784 insignificant 1.00000 insignificant 0.861240 0.72627 0.130885 14 0.832522 0.70360 0.128919 1.6184e-16 1.0000e+00 weaklyHypermeth 8.0921e-14 1.0000000 weaklyHypermeth 2.3502e-08 0.999998 weaklyHypermeth 2.0432e-05 1 weaklyHypermeth 0.126562 3.3506e-05 weaklyHypermeth 0.0047866 weaklyHypermeth 0.861240 0.82384 0.0163243 14 0.832522 0.811445 0.02107746 9.8353e-02 6.5427e-01 insignificant 1.0000000 1.000000 insignificant 3.4668e-02 0.739935 weaklyHypermeth 1.000000 1 insignificant 0.0185600 0.285309 insignificant 1 insignificant 0.72627 0.82384 -0.115040 14 0.70360 0.811445 -0.1078413 0.999981 4.1739e-08 weaklyHypometh 1 4.9887e-06 weaklyHypometh 1.00000 5.4252e-05 weaklyHypometh 1 0.0090419 weaklyHypometh -0.108002 0.00027581 weaklyHypometh 0.068952 weaklyHypometh chr7 62677441 62678441 77600 ENSG00000214660 0.875483 184 5 0.892711 60 5 0.621591 86 5 0.887839 250 5 0.935556 52 5 0.83650 248 5 0.645238 68 5 0.865455 96 5 0.812601 110 5 0.8132323 76 5 0.913121 124 5 0.750000 25 1 0.738590 74 5 NA 0 0 0.842647 76 5 0.958333 44 5 0.807244 70 5 0.862886 265 5 0.70555 107 5 0.757528 199 5 0.78182 34 4 0.47587 73 5 0.815236 152 5 0.67500 14 1 0.74952 29 5 0.830926 133 5 0.666667 28 1 0.971429 21 3 0.761111 57 5 0.883810 112 5 0.714599 132 5 0.873698 232 5 0.72502 105 5 0.51970 57 5 0.75520 202 5 0.29333 19 3 0.55556 57 5 0.568545 95 5 0.834079 284 5 0.839532 344 5 0.82823 285 5 0.90315 263 5 0.80575 351 5 0.880380 0.882359 0.601391 0.890314 0.925000 0.82824 0.631158 0.839734 0.788916 0.8171630 0.911386 0.752874 0.656863 NA 0.800963 0.951509 0.780001 0.831730 0.62767 0.755729 0.911442 0.540564 0.820800 0.788793 0.82570 0.785696 0.683190 0.955665 0.721264 0.860345 0.658300 0.858598 0.70585 0.47192 0.72565 0.294253 0.61015 0.556329 0.835526 0.819877 0.808203 0.88971 0.76226 3 0.831978 0.807276 0.0182767 5 0.825639 0.806427 0.01921170 0.361949 0.925178 insignificant 1 1 insignificant 5.1372e-01 0.6641645 insignificant 1.0000000 1.0000 insignificant 0.05031148 0.2535907 lowCoverage 1 lowCoverage 0.831978 0.65607 0.177654 5 0.825639 0.66679 0.15884615 3.3421e-12 6.4260e-01 weaklyHypermeth 1.8567e-10 1.00000000 weaklyHypermeth 5.7205e-07 0.990854 weaklyHypermeth 7.1506e-05 1 weaklyHypermeth 0.2473943 0.01297857 lowCoverage 0.489585 lowCoverage 0.831978 0.85331 -1.3451e-02 5 0.825639 0.838495 -0.0128558 0.6969912 0.4540593 insignificant 1.00000 1.00 insignificant 0.5631985 0.6066847 insignificant 1.00000 1 insignificant -2.5196e-02 0.362054 lowCoverage 1.00000 lowCoverage 0.807276 0.65607 0.156319 5 0.806427 0.66679 0.139634 1.4708e-07 5.1219e-01 weaklyHypermeth 4.9026e-06 1.0000000 weaklyHypermeth 3.7733e-05 0.973869 weaklyHypermeth 2.0605e-03 1 weaklyHypermeth 0.197083 3.3614e-02 lowCoverage 0.7307386 lowCoverage 0.807276 0.85331 -0.0315737 5 0.806427 0.838495 -0.03206748 9.1271e-01 3.4334e-01 insignificant 1.0000000 1.000000 insignificant 7.2773e-01 0.426938 insignificant 1.000000 1 insignificant -0.0755071 0.081997 lowCoverage 1 lowCoverage 0.65607 0.85331 -0.179738 5 0.66679 0.838495 -0.1717019 0.802203 2.6382e-06 weaklyHypometh 1 1.7588e-04 weaklyHypometh 0.99803 1.5606e-04 weaklyHypometh 1 0.0208882 weaklyHypometh -0.272590 0.00909986 lowCoverage 0.413630 lowCoverage chr7 62716396 62717396 77602 ENSG00000214660 0.797441 264 7 0.655467 250 6 0.554201 234 8 0.896402 246 9 0.863228 168 8 0.73021 539 10 0.901630 162 6 0.761891 206 7 0.822917 132 6 0.8639652 102 5 0.841058 304 8 0.805696 55 5 0.791667 107 5 0.74611 111 5 0.676683 212 6 0.888603 83 4 1.000000 1 0 0.623923 450 5 0.87743 339 10 0.689689 380 6 0.91415 67 5 0.82431 48 4 0.815976 212 8 0.83700 112 7 0.52619 40 4 0.895086 288 9 0.805736 224 6 0.686581 95 6 0.856309 305 5 0.808920 330 6 0.818858 342 8 0.874721 314 6 0.62150 267 8 0.48614 250 5 0.64952 299 10 0.77057 100 7 0.52453 276 9 0.753116 444 9 0.856538 333 7 0.820798 247 6 0.58842 211 6 0.80068 415 10 0.86160 245 6 0.789830 0.784937 0.674106 0.850070 0.836927 0.85776 0.853899 0.834186 0.762713 0.8452476 0.850967 0.771842 0.882772 0.77539 0.844681 0.868606 NA 0.829855 0.77238 0.809428 0.882520 0.790488 0.865279 0.829188 0.67409 0.861341 0.757184 0.805772 0.727297 0.736001 0.814531 0.867550 0.51551 0.32955 0.59561 0.717647 0.46052 0.775696 0.785545 0.782406 0.698987 0.76716 0.82836 4 0.804098 0.790492 0.0091493 6 0.698374 0.753399 -0.05502553 0.774871 0.373220 insignificant 1 1 insignificant 9.3459e-01 0.3575225 insignificant 1.0000000 1.0000 insignificant -0.01590910 0.6871437 insignificant 1 insignificant 0.804889 0.57396 0.260881 6 0.833943 0.61455 0.21939426 3.3977e-19 1.0000e+00 hypermethylated 8.4943e-17 1.00000000 hypermethylated 4.0985e-07 0.998165 hypermethylated 5.8550e-05 1 hypermethylated 0.1551786 0.01976728 weaklyHypermeth 0.599008 insignificant 0.804333 0.74156 4.0134e-02 6 0.714808 0.739824 -0.0250155 0.1998207 0.8613714 insignificant 1.00000 1.00 insignificant 0.4723460 0.8142832 insignificant 1.00000 1 insignificant 3.8046e-03 0.948257 insignificant 1.00000 insignificant 0.791315 0.57396 0.251619 6 0.837866 0.61455 0.223317 3.1635e-15 1.0000e+00 hypermethylated 1.0545e-12 1.0000000 hypermethylated 1.6035e-07 0.999999 hypermethylated 3.2070e-05 1 hypermethylated 0.171088 1.3461e-02 weaklyHypermeth 0.3638111 insignificant 0.790316 0.74156 0.0295553 6 0.718171 0.739824 -0.02165296 2.7860e-01 7.9493e-01 insignificant 1.0000000 1.000000 insignificant 5.8203e-01 0.891920 insignificant 1.000000 1 insignificant 0.0197137 0.747770 insignificant 1 insignificant 0.57396 0.74446 -0.225666 8 0.61455 0.821461 -0.2069123 1.000000 8.3495e-09 hypomethylated 1 1.6699e-06 hypomethylated 1.00000 7.0728e-04 hypomethylated 1 0.0544061 hypomethylated -0.151374 0.05753334 insignificant 1.000000 insignificant chr7 62733297 62734297 77604 ENSG00000214660 0.899756 319 6 0.809456 310 6 0.457210 238 6 0.922035 394 6 0.803936 143 6 0.71111 544 6 0.726369 141 6 0.845219 325 6 0.787461 139 6 0.8601068 193 6 0.841732 452 6 0.748408 120 5 0.819558 219 6 0.79797 192 6 0.741839 282 6 0.865995 89 5 0.830000 18 2 0.730529 397 6 0.77066 570 6 0.729150 314 6 0.88438 118 6 0.76163 191 6 0.888940 160 6 0.84434 246 6 0.93791 295 6 0.938534 441 6 0.831866 163 6 0.667707 171 6 0.785429 376 6 0.868097 446 6 0.821263 303 6 0.842773 223 6 0.70742 320 6 0.64672 204 6 0.49552 387 6 0.66490 159 2 0.62668 293 6 0.661142 243 6 0.796586 411 6 0.796047 445 6 0.69167 414 6 0.81899 246 6 0.82115 289 6 0.939253 0.861067 0.491526 0.936300 0.886217 0.77211 0.838513 0.879066 0.832921 0.8990829 0.861586 0.825282 0.873792 0.84147 0.885784 0.821281 0.821087 0.895450 0.80700 0.774598 0.927654 0.791409 0.914104 0.876601 0.93832 0.907749 0.885399 0.771354 0.837291 0.910122 0.867900 0.877703 0.77484 0.68441 0.62057 0.773701 0.65014 0.772149 0.841941 0.829037 0.813347 0.85012 0.88057 6 0.838489 0.856458 -0.0335891 6 0.743867 0.868471 -0.12460391 0.994372 0.059215 insignificant 1 1 insignificant 9.9679e-01 0.1401885 insignificant 1.0000000 1.0000 insignificant -0.05448106 0.0895934 insignificant 1 insignificant 0.838489 0.68120 0.138455 6 0.743867 0.69288 0.05098377 1.6320e-08 9.8820e-01 weaklyHypermeth 5.4401e-07 1.00000000 weaklyHypermeth 5.1739e-06 0.999276 weaklyHypermeth 3.6956e-04 1 weaklyHypermeth 0.1511941 0.00175107 weaklyHypermeth 0.145695 insignificant 0.838769 0.79467 1.3331e-02 6 0.812290 0.790683 0.0216072 0.2381065 0.6798414 insignificant 1.00000 1.00 insignificant 0.2049387 0.8352862 insignificant 1.00000 1 insignificant 3.5813e-05 0.999136 insignificant 1.00000 insignificant 0.856458 0.68120 0.177721 6 0.868471 0.69288 0.175588 1.2566e-12 1.0000e+00 weaklyHypermeth 1.0472e-10 1.0000000 weaklyHypermeth 1.4929e-07 1.000000 weaklyHypermeth 3.2070e-05 1 weaklyHypermeth 0.205675 1.9742e-04 hypermethylated 0.0164521 hypermethylated 0.856458 0.79479 0.0564274 6 0.868471 0.820585 0.04788625 5.2193e-03 9.9831e-01 weaklyHypermeth 0.2269277 1.000000 insignificant 9.4863e-03 0.997212 weaklyHypermeth 0.474313 1 insignificant 0.0545169 0.121759 insignificant 1 insignificant 0.68100 0.79467 -0.110834 6 0.64170 0.790683 -0.1489850 0.995586 1.7522e-05 weaklyHypometh 1 9.2222e-04 weaklyHypometh 0.99957 2.3833e-03 weaklyHypometh 1 0.1134918 insignificant -0.151158 0.00335312 weaklyHypometh 0.197243 insignificant chr7 64793686 64794686 77711 ZNF92 ENSG00000146757 0.714008 182 5 0.723536 139 3 0.578723 64 3 0.679401 135 5 0.703402 85 5 0.68961 103 2 0.635286 97 5 0.690079 94 3 0.658378 65 5 0.7500000 36 2 0.529248 139 3 0.766667 37 4 0.645455 61 3 0.68000 25 4 0.666667 34 1 0.200000 26 3 0.809922 82 2 0.696631 101 4 0.58333 47 2 0.641686 120 3 0.76667 23 2 0.78182 42 2 0.591139 144 5 0.52051 29 3 0.97917 42 3 0.777368 140 3 0.878114 57 3 0.712281 33 2 0.857423 72 3 0.692997 124 3 0.958744 157 3 0.691400 160 3 0.73076 141 5 0.71152 47 3 0.51934 205 5 0.69333 33 4 0.56774 62 3 0.744931 139 3 0.698853 157 5 0.691440 179 5 0.71016 154 5 0.64513 121 4 0.64073 179 5 0.959936 0.887734 0.908723 0.952706 0.905792 0.95019 0.890416 0.907083 0.881568 0.9500000 0.860760 0.988333 0.929773 0.84900 0.936667 0.496667 0.863426 0.919062 0.96667 0.898425 0.963333 0.929091 0.826066 0.800385 0.97786 0.939684 0.868873 0.916140 0.912367 0.924398 0.954744 0.927836 0.90904 0.68710 0.83744 0.836667 0.87194 0.889154 0.909124 0.947295 0.885637 0.93127 0.95305 1 0.830742 0.877810 -0.0098958 3 0.669350 0.684413 -0.01506288 0.895681 0.428013 lowCoverage 1 1 lowCoverage 8.3202e-01 0.1766283 lowCoverage 1.0000000 1.0000 lowCoverage -0.11520093 0.0270709 lowCoverage 1 lowCoverage 0.830742 0.80223 0.052466 5 0.669350 0.62190 0.04744552 1.8930e-02 9.8172e-01 weaklyHypermeth 2.5240e-01 1.00000000 insignificant 5.8783e-02 0.960342 insignificant 9.0435e-01 1 insignificant -0.0091679 0.85044576 lowCoverage 1.000000 lowCoverage 0.830742 0.73671 -1.3341e-02 5 0.669350 0.671679 -0.0023290 0.6271306 0.3619613 insignificant 1.00000 1.00 insignificant 0.7691054 0.1924980 insignificant 1.00000 1 insignificant -2.5158e-02 0.430898 lowCoverage 1.00000 lowCoverage 0.877810 0.80223 0.063703 3 0.684413 0.62190 0.062508 1.1747e-02 9.9462e-01 lowCoverage 1.5060e-01 1.0000000 lowCoverage 3.0647e-02 0.994635 lowCoverage 4.8647e-01 1 lowCoverage 0.106033 7.5562e-02 lowCoverage 1.0000000 lowCoverage 0.877810 0.73671 -0.0037280 3 0.684413 0.671679 0.01273387 5.8550e-01 3.2142e-01 lowCoverage 1.0000000 1.000000 lowCoverage 7.0814e-01 0.600088 lowCoverage 1.000000 1 lowCoverage 0.0900425 0.052106 lowCoverage 1 lowCoverage 0.80223 0.73671 -0.065596 5 0.62190 0.671679 -0.0497745 0.967659 4.6340e-02 weaklyHypometh 1 6.4360e-01 insignificant 0.98995 4.7706e-02 weaklyHypometh 1 0.8518926 insignificant -0.015991 0.70934607 lowCoverage 1.000000 lowCoverage chr7 65290062 65291062 77737 ASL ENSG00000126522 0.837179 56 6 0.675904 77 6 0.714286 30 3 0.833333 53 6 0.724579 104 6 0.66660 63 6 0.571140 48 6 0.521465 48 5 0.638889 48 4 0.7730159 30 5 0.751587 94 6 0.879902 34 2 0.780338 83 6 0.68171 45 2 0.770833 45 5 0.808333 23 2 0.734409 64 2 0.735137 50 6 0.40278 19 0 0.631944 40 5 0.58333 19 0 0.83333 7 0 0.879227 70 3 0.61735 44 6 0.78333 50 6 0.680556 46 3 0.758514 52 6 0.403333 16 1 0.661111 76 6 0.657242 61 4 0.647059 60 4 0.587698 33 4 0.61205 79 6 0.78380 36 4 0.63068 84 6 0.50000 4 0 0.57528 52 6 0.624167 54 3 0.722222 36 3 0.690625 81 6 0.78617 57 6 0.79333 29 2 0.69127 53 6 0.831300 0.538872 0.735222 0.813218 0.704215 0.63902 0.541081 0.479885 0.635057 0.7548440 0.726232 0.747879 0.779816 0.64775 0.747845 0.793103 0.744610 0.675322 0.38937 0.604167 0.543103 0.810345 0.882246 0.694581 0.78103 0.653736 0.753530 0.434985 0.664943 0.656763 0.615619 0.575944 0.58409 0.77466 0.60854 0.613379 0.48837 0.621570 0.709770 0.744253 0.768947 0.80711 0.67282 0 0.708452 0.700375 0.0025182 6 0.752314 0.605588 0.14672526 0.561659 0.768411 insignificant 1 1 insignificant 5.5489e-01 0.8205254 insignificant 1.0000000 1.0000 insignificant 0.03232786 0.4798316 lowCoverage 1 lowCoverage 0.708452 0.61489 0.086193 6 0.752314 0.67904 0.07327821 5.9270e-03 9.9846e-01 weaklyHypermeth 9.1184e-02 1.00000000 weaklyHypermeth 4.5469e-02 0.987423 weaklyHypermeth 7.6696e-01 1 insignificant 0.0856713 0.09129405 lowCoverage 1.000000 lowCoverage 0.708729 0.73828 -1.9164e-02 6 0.783275 0.685501 0.0977731 0.9662944 0.3375358 insignificant 1.00000 1.00 insignificant 0.9347672 0.4019178 insignificant 1.00000 1 insignificant -3.0056e-02 0.390804 lowCoverage 1.00000 lowCoverage 0.700375 0.61489 0.088232 6 0.605588 0.67904 -0.073447 7.1154e-03 9.9799e-01 weaklyHypermeth 1.0312e-01 1.0000000 insignificant 1.0995e-01 0.950512 insignificant 1.0000e+00 1 insignificant 0.053343 3.3209e-01 lowCoverage 1.0000000 lowCoverage 0.700375 0.73725 -0.0398086 6 0.605588 0.640573 -0.03498460 9.7599e-01 2.6489e-01 insignificant 1.0000000 1.000000 insignificant 9.9746e-01 0.344746 insignificant 1.000000 1 insignificant -0.0623839 0.169240 lowCoverage 1 lowCoverage 0.61489 0.73725 -0.120748 6 0.67904 0.640573 0.0384624 0.997535 2.9391e-03 weaklyHypometh 1 7.5363e-02 weaklyHypometh 0.99477 5.6504e-02 insignificant 1 0.9742047 insignificant -0.115727 0.03098317 lowCoverage 0.815346 lowCoverage chr7 68316552 68317552 77895 ENSG00000200189 0.817411 93 6 0.775058 94 6 0.300000 49 4 0.736427 80 6 0.644841 33 4 0.69728 108 6 0.620502 58 4 0.857143 36 4 0.491111 33 4 0.8247619 19 2 0.681830 105 6 0.800000 13 1 0.700000 24 2 0.65333 38 5 0.634615 37 2 0.552381 18 1 NA 0 0 0.745614 88 6 0.58849 48 4 0.685816 84 6 0.61905 12 0 0.93750 25 3 0.879630 28 1 0.69630 36 6 0.62325 68 6 0.795052 91 6 0.798070 40 4 0.821429 12 0 0.716250 50 2 0.622317 62 6 0.787059 81 6 0.721591 74 6 0.75400 96 6 0.43878 52 6 0.69017 58 4 0.68721 69 2 0.89360 41 3 0.556060 113 6 0.680859 90 6 0.834635 93 6 0.79658 76 6 0.84444 38 6 0.71743 99 6 0.647281 0.616935 0.357447 0.702432 0.470871 0.56456 0.586275 0.737589 0.392671 0.7787234 0.594827 0.693617 0.664894 0.60426 0.621113 0.602837 NA 0.610462 0.50089 0.546905 0.645718 0.745455 0.900709 0.604255 0.61480 0.561692 0.819218 0.760638 0.682553 0.466903 0.640651 0.677131 0.62830 0.42097 0.64675 0.659574 0.83245 0.597211 0.679139 0.694371 0.699334 0.72340 0.52104 0 0.661626 0.725389 -0.0517870 6 0.670853 0.693153 -0.02230011 0.836452 0.024070 weaklyHypometh 1 1 insignificant 9.7389e-01 0.0560613 insignificant 1.0000000 1.0000 insignificant -0.07742528 0.0794007 lowCoverage 1 lowCoverage 0.664410 0.64336 0.031533 6 0.687001 0.68772 -0.00072335 7.6068e-02 5.1209e-01 insignificant 8.3591e-01 1.00000000 insignificant 6.5539e-02 0.706987 insignificant 9.5243e-01 1 insignificant 0.0040630 0.95596876 lowCoverage 1.000000 lowCoverage 0.664410 0.74747 -6.2740e-02 6 0.687001 0.759800 -0.0727983 0.9970760 0.0856926 insignificant 1.00000 1.00 insignificant 0.9987430 0.0783336 insignificant 1.00000 1 insignificant -1.0076e-01 0.042433 lowCoverage 1.00000 lowCoverage 0.728696 0.64336 0.085474 6 0.748547 0.68772 0.060823 4.0236e-03 9.5698e-01 weaklyHypermeth 6.3866e-02 1.0000000 weaklyHypermeth 2.7353e-02 0.933331 weaklyHypermeth 4.4840e-01 1 insignificant 0.081488 2.8707e-01 lowCoverage 1.0000000 lowCoverage 0.728696 0.74747 -0.0124267 6 0.748547 0.759800 -0.01125239 7.1669e-01 4.7346e-01 insignificant 1.0000000 1.000000 insignificant 7.3500e-01 0.544183 insignificant 1.000000 1 insignificant -0.0233306 0.606873 lowCoverage 1 lowCoverage 0.64336 0.74747 -0.133414 6 0.68772 0.759800 -0.0720750 0.939534 5.1187e-02 insignificant 1 6.6843e-01 insignificant 0.98327 5.8010e-02 insignificant 1 0.9832259 insignificant -0.104819 0.18746997 lowCoverage 1.000000 lowCoverage chr7 68713720 68714720 77942 AUTS2 ENSG00000158321 0.798850 225 8 0.517321 146 8 0.581566 122 8 0.699342 239 8 0.735891 70 5 0.64875 258 8 0.678003 94 8 0.554302 166 8 0.749097 97 8 0.7655754 93 8 0.808533 288 8 0.674901 73 8 0.808339 184 8 0.61905 18 2 0.745398 86 8 0.594608 53 3 0.604167 38 3 0.745951 203 8 0.83242 128 4 0.740713 240 8 0.71667 44 2 0.81818 55 4 0.689552 130 8 0.71852 48 3 0.61508 53 5 0.616806 166 8 0.546429 69 4 0.812500 9 0 0.636245 121 8 0.725984 170 8 0.720487 147 8 0.668153 317 8 0.59455 81 8 0.68090 94 8 0.67570 155 8 0.64394 42 3 0.66307 67 6 0.631960 164 8 0.623851 226 8 0.769140 261 8 0.70375 197 8 0.72657 188 8 0.75908 189 8 0.826425 0.616906 0.615270 0.767104 0.730754 0.68215 0.719491 0.759417 0.720439 0.8181178 0.778290 0.703672 0.825075 0.71821 0.766510 0.598631 0.664694 0.755410 0.83976 0.786889 0.783037 0.762919 0.767644 0.841519 0.76881 0.692890 0.664835 0.724852 0.678489 0.760907 0.703004 0.718570 0.64884 0.71431 0.73026 0.632598 0.73685 0.679677 0.783158 0.795667 0.767728 0.83328 0.81475 1 0.705424 0.709556 0.0152271 8 0.743165 0.674317 0.06884790 0.439582 0.957459 insignificant 1 1 insignificant 8.6206e-01 0.9326489 insignificant 1.0000000 1.0000 insignificant 0.00475496 0.8792918 insignificant 1 insignificant 0.704497 0.69983 0.035844 8 0.691831 0.65888 0.03294916 5.9385e-02 9.3957e-01 insignificant 6.9052e-01 1.00000000 insignificant 4.7695e-02 0.929399 weaklyHypermeth 7.6927e-01 1 insignificant 0.0467849 0.06937613 insignificant 1.000000 insignificant 0.705151 0.72385 -5.0884e-02 8 0.734968 0.679099 0.0558689 0.9248108 0.0370325 weaklyHypometh 1.00000 1.00 insignificant 0.9410448 0.0923950 insignificant 1.00000 1 insignificant -2.1340e-02 0.534847 insignificant 1.00000 insignificant 0.709531 0.69983 0.021728 8 0.678143 0.65888 0.019261 1.3258e-01 8.7605e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.2147e-02 0.924115 weaklyHypermeth 6.2906e-01 1 insignificant 0.042030 1.3336e-01 insignificant 1.0000000 insignificant 0.710090 0.72385 -0.0640657 8 0.735619 0.679099 0.05651970 9.9901e-01 3.2828e-02 weaklyHypometh 1.0000000 1.000000 insignificant 8.9767e-01 0.341611 insignificant 1.000000 1 insignificant -0.0260950 0.468427 insignificant 1 insignificant 0.69983 0.72538 -0.087011 8 0.65888 0.746261 -0.0873794 0.999768 1.1752e-04 weaklyHypometh 1 5.5963e-03 weaklyHypometh 0.99908 1.0475e-03 weaklyHypometh 1 0.0698360 weaklyHypometh -0.068125 0.05748776 insignificant 1.000000 insignificant chr7 68713853 68714853 77943 AUTS2 ENSG00000158321 0.819250 468 17 0.680199 409 17 0.654797 284 17 0.774231 307 14 0.770534 145 14 0.75247 519 17 0.725318 211 17 0.705442 360 17 0.802730 172 16 0.8250790 257 17 0.839178 658 17 0.825622 116 12 0.845256 448 17 0.61905 18 2 0.815816 204 17 0.703761 111 7 0.542593 75 7 0.795774 321 17 0.86144 336 13 0.813396 474 17 0.81520 91 7 0.85848 105 8 0.773965 315 17 0.81620 112 10 0.77269 76 8 0.736900 514 17 0.762068 181 10 0.862395 39 3 0.766045 345 17 0.794830 460 17 0.799448 465 17 0.778929 649 17 0.70229 342 17 0.71472 308 17 0.71568 354 17 0.67632 72 7 0.71703 134 12 0.749271 510 17 0.738216 391 17 0.834699 498 17 0.81584 316 15 0.80506 365 15 0.82292 359 17 0.803497 0.696713 0.660687 0.768392 0.767403 0.74120 0.751364 0.799808 0.742864 0.8253202 0.808840 0.833088 0.845891 0.76242 0.821063 0.658131 0.703264 0.786650 0.83221 0.811272 0.822402 0.786130 0.789734 0.833616 0.82826 0.757157 0.800058 0.765432 0.783529 0.794579 0.791521 0.776967 0.69881 0.71602 0.70881 0.689697 0.73945 0.752138 0.805842 0.820450 0.821246 0.84794 0.83495 4 0.779399 0.821002 -0.0068302 17 0.789353 0.760061 0.02929201 0.896166 0.304545 insignificant 1 1 insignificant 9.9674e-01 0.2524784 insignificant 1.0000000 1.0000 insignificant -0.03616588 0.1104774 insignificant 1 insignificant 0.779196 0.77267 0.050546 17 0.776063 0.73137 0.04468818 1.6724e-04 9.9971e-01 weaklyHypermeth 3.6356e-03 1.00000000 weaklyHypermeth 6.3482e-04 0.999615 weaklyHypermeth 2.1161e-02 1 weaklyHypermeth 0.0460441 0.04098080 weaklyHypermeth 0.853767 insignificant 0.779344 0.78072 -4.6931e-02 17 0.787154 0.775391 0.0117624 0.9994262 0.0019200 weaklyHypometh 1.00000 0.96 insignificant 0.9995220 0.0028817 weaklyHypometh 1.00000 1 insignificant -4.4749e-02 0.099136 insignificant 1.00000 insignificant 0.821226 0.77267 0.060082 17 0.782036 0.73137 0.050661 1.2455e-07 9.9978e-01 weaklyHypermeth 4.4481e-06 1.0000000 weaklyHypermeth 2.3395e-06 0.999847 weaklyHypermeth 2.3395e-04 1 weaklyHypermeth 0.082210 4.9770e-05 weaklyHypermeth 0.0055300 weaklyHypermeth 0.821247 0.78072 -0.0381946 17 0.798064 0.775391 0.02267250 9.9967e-01 7.6153e-03 weaklyHypometh 1.0000000 1.000000 insignificant 9.3078e-01 0.390525 insignificant 1.000000 1 insignificant -0.0085835 0.683115 insignificant 1 insignificant 0.77267 0.78170 -0.096051 17 0.73137 0.823990 -0.0926147 1.000000 2.1864e-09 weaklyHypometh 1 1.4805e-06 weaklyHypometh 1.00000 3.1140e-07 weaklyHypometh 1 0.0003114 weaklyHypometh -0.090793 0.00289176 weaklyHypometh 0.186647 insignificant chr7 69541433 69542433 78138 AUTS2 ENSG00000158321 0.844402 281 6 0.75846 123 6 0.80344 125 6 0.90477 160 6 0.84444 54 6 0.82737 305 6 0.85131 83 6 0.815103 120 6 0.82250 109 6 0.88452 83 6 0.81282 111 6 0.67172 62 6 0.860509 105 6 NA 0 0 0.87132 127 6 0.908144 85 6 0.86905 44 6 0.78963 162 6 0.843454 115 6 0.804672 205 6 0.78704 42 6 0.833333 91 6 0.86674 188 6 0.890196 61 6 0.889220 50 6 0.87511 131 6 0.81366 85 6 0.92857 37 5 0.76841 71 6 0.888954 164 6 0.86540 134 6 0.86540 371 6 0.758075 123 6 0.776219 118 6 0.56417 67 2 0.730640 62 6 0.787393 54 5 0.810636 176 6 0.88423 230 6 0.86890 287 6 0.880589 182 6 0.86431 286 6 0.89138 205 6 0.829818 0.741027 0.79087 0.895538 0.826421 0.818644 0.835276 0.805378 0.802571 0.875368 0.808211 0.651306 0.850053 NA 0.861178 0.903645 0.863973 0.768034 0.836840 0.79273 0.77701 0.822581 0.860730 0.875522 0.876975 0.870914 0.794323 0.91903 0.754361 0.875957 0.851727 0.853521 0.745595 0.758756 0.747854 0.721454 0.773573 0.7945460 0.870581 0.853589 0.869803 0.852694 0.88120 6 0.84547 0.85123 -0.0236495 6 0.83355 0.85658 -0.0230225 0.859950 0.0097990 weaklyHypometh 1 1 insignificant 0.992788 0.0100280 weaklyHypometh 1 1 insignificant -0.02507443 0.18462 insignificant 1 insignificant 0.84547 0.7283333 0.0574432 6 0.83355 0.777290 0.05626488 5.2249e-06 9.7072e-01 weaklyHypermeth 2.0096e-04 1.00000000 weaklyHypermeth 4.0956e-03 0.982637 weaklyHypermeth 1.5752e-01 1 insignificant 0.093072 5.0727e-02 insignificant 1.0000e+00 insignificant 0.84547 0.910924 -0.0437029 6 0.83355 0.87653 -0.0429733 9.9960e-01 2.0636e-03 weaklyHypometh 1.0000e+00 0.294805 insignificant 9.9980e-01 0.0012508 weaklyHypometh 1.0000e+00 0.56082 insignificant -4.6954e-02 0.00212645 weaklyHypometh 0.52849 insignificant 0.85123 0.7283333 0.084221 6 0.85658 0.777290 0.0792874 2.5741e-06 9.9735e-01 weaklyHypermeth 1.1700e-04 1.0000000 weaklyHypermeth 3.3125e-03 0.998008 weaklyHypermeth 1.2269e-01 1 insignificant 0.118147 2.1000e-02 weaklyHypermeth 8.7586e-01 insignificant 0.85123 0.910924 -0.0195698 6 0.85658 0.87653 -0.0199508 9.6288e-01 0.08383653 insignificant 1.0000e+00 1.00000 insignificant 8.4788e-01 0.3831574 insignificant 1.0000e+00 1.00000 insignificant -0.02187979 1.5109e-01 insignificant 1.000000 insignificant 0.7283333 0.910924 -0.1028061 6 0.777290 0.87653 -0.099238 9.9997e-01 8.1568e-07 weaklyHypometh 1.000000 1.0196e-04 weaklyHypometh 0.9999773 6.9037e-04 weaklyHypometh 1 6.9037e-02 weaklyHypometh -0.140026 1.1712e-02 weaklyHypometh 0.8304289 insignificant chr7 71533276 71534276 78247 CALN1 ENSG00000183166 0.612138 291 11 0.53038 395 12 0.60367 339 12 0.60959 198 11 0.70436 232 12 0.68767 451 12 0.58066 292 12 0.610916 275 11 0.58427 228 10 0.60587 222 11 0.68906 466 12 0.61024 203 10 0.723994 330 12 0.666463 56 4 0.66178 281 12 0.610241 129 10 0.54312 328 10 0.66346 195 12 0.677270 315 10 0.667315 362 10 0.67907 106 8 0.666071 66 6 0.62583 255 12 0.577357 133 10 0.667479 99 9 0.67363 485 12 0.64821 143 12 0.69177 98 9 0.63255 308 12 0.651472 520 12 0.71195 479 12 0.67292 491 12 0.512548 441 12 0.558585 261 12 0.58881 450 12 0.410141 86 6 0.538780 186 12 0.684265 430 11 0.63545 298 10 0.70553 247 11 0.680758 231 9 0.68332 201 10 0.70858 216 10 0.735351 0.607338 0.59433 0.686627 0.694099 0.685433 0.642553 0.682780 0.631431 0.667271 0.695150 0.620158 0.754210 0.69622 0.696348 0.652353 0.636294 0.684619 0.718802 0.71305 0.75371 0.722897 0.685526 0.690806 0.713468 0.713472 0.670143 0.75626 0.725962 0.726131 0.701043 0.736384 0.501180 0.529110 0.590435 0.496801 0.564703 0.6915355 0.732579 0.736845 0.701447 0.730659 0.74342 7 0.68409 0.72981 -0.0410178 12 0.64753 0.66673 -0.0191937 0.930957 0.0026525 weaklyHypometh 1 1 insignificant 0.892154 0.0044593 weaklyHypometh 1 1 insignificant -0.02606841 0.10442 insignificant 1 insignificant 0.68409 0.6111111 0.0522001 12 0.64753 0.568962 0.07857064 5.5931e-08 6.7902e-01 weaklyHypermeth 2.5423e-06 1.00000000 weaklyHypermeth 1.2870e-05 0.733723 weaklyHypermeth 9.1926e-04 1 weaklyHypermeth 0.083268 7.4324e-02 insignificant 1.0000e+00 insignificant 0.68409 0.748533 -0.0468037 10 0.64753 0.69740 -0.0498626 6.6715e-01 1.4914e-03 weaklyHypometh 1.0000e+00 0.294805 insignificant 8.8420e-01 0.0016975 weaklyHypometh 1.0000e+00 0.56082 insignificant -5.0605e-02 0.01462399 weaklyHypometh 1.00000 insignificant 0.72981 0.6111111 0.108405 12 0.66673 0.568962 0.0977643 4.9428e-09 9.5526e-01 weaklyHypermeth 2.4714e-07 1.0000000 weaklyHypermeth 7.2090e-07 0.983610 weaklyHypermeth 1.0299e-04 1 weaklyHypermeth 0.109336 2.9994e-02 weaklyHypermeth 1.0000e+00 insignificant 0.72981 0.748533 -0.0045570 10 0.66673 0.69740 -0.0306689 8.8331e-02 0.05359520 insignificant 1.0000e+00 1.00000 insignificant 4.8340e-01 0.2169149 insignificant 1.0000e+00 1.00000 insignificant -0.02453617 1.7180e-01 insignificant 1.000000 insignificant 0.6111111 0.748533 -0.1532594 10 0.568962 0.69740 -0.128433 8.9094e-01 3.1522e-04 weaklyHypometh 1.000000 2.2516e-02 weaklyHypometh 0.9998838 4.9009e-05 weaklyHypometh 1 9.8018e-03 weaklyHypometh -0.133873 1.3287e-02 weaklyHypometh 0.8304289 insignificant chr7 72098204 72099204 78261 ENSG00000201862 0.775000 32 4 0.61684 84 8 0.71879 56 4 0.71927 72 4 0.75497 57 6 0.65812 110 7 0.84175 86 5 0.677963 66 5 0.92812 57 5 0.81964 52 6 0.83030 137 8 0.64866 73 5 0.825010 77 7 0.583333 10 0 0.54683 102 7 0.750613 37 2 0.71444 33 2 0.37821 44 3 0.927609 81 6 0.735764 111 5 0.97656 44 4 0.569388 38 3 0.68452 44 3 0.891837 43 3 0.594505 93 7 0.73994 122 8 0.78672 63 6 0.64675 21 2 0.75747 47 4 0.868304 97 7 0.71014 105 7 0.72524 138 7 0.500056 82 5 0.516340 131 8 0.51833 75 5 0.363248 61 7 0.371243 44 6 0.499472 124 8 0.54577 64 7 0.53387 72 6 0.374603 37 4 0.63095 16 0 0.50524 63 3 0.750000 0.668067 0.63623 0.668155 0.848120 0.657113 0.905789 0.736047 0.875000 0.891837 0.873199 0.800023 0.795369 0.65808 0.610034 0.793417 0.885838 0.577528 0.934463 0.70615 0.94643 0.337429 0.627976 0.829932 0.583506 0.763483 0.799581 0.74952 0.827874 0.829507 0.686238 0.798407 0.443376 0.411446 0.476190 0.261294 0.354901 0.4592223 0.536541 0.457918 0.349206 0.571429 0.54660 0 0.73929 0.74503 0.0015509 6 0.67649 0.72047 -0.0439802 0.463238 0.3725783 insignificant 1 1 insignificant 0.633744 0.2555922 insignificant 1 1 insignificant -0.02338734 0.61234 lowCoverage 1 lowCoverage 0.73929 0.4564797 0.3160153 6 0.67649 0.442226 0.23425982 9.8246e-15 9.9999e-01 hypermethylated 7.5574e-13 1.00000000 hypermethylated 2.2075e-06 0.999998 hypermethylated 1.8396e-04 1 hypermethylated 0.261113 1.4290e-05 lowCoverage 1.2991e-03 lowCoverage 0.73929 0.515873 0.2396189 6 0.67649 0.50577 0.1707196 4.5897e-09 9.9720e-01 hypermethylated 1.1474e-06 1.000000 hypermethylated 1.5625e-04 0.9936801 hypermethylated 1.7362e-02 1.00000 hypermethylated 2.0448e-01 0.00335661 lowCoverage 0.52849 lowCoverage 0.74503 0.4564797 0.290170 6 0.72047 0.442226 0.2782400 4.4469e-10 1.0000e+00 hypermethylated 2.7793e-08 1.0000000 hypermethylated 5.6822e-06 1.000000 hypermethylated 5.1657e-04 1 hypermethylated 0.284500 1.6897e-05 hypermethylated 1.8774e-03 hypermethylated 0.74503 0.515873 0.2383905 6 0.72047 0.50577 0.2146998 1.2994e-07 0.99998999 hypermethylated 3.1146e-05 1.00000 hypermethylated 4.8942e-04 0.9999811 hypermethylated 6.9917e-02 1.00000 hypermethylated 0.22786367 1.8878e-03 lowCoverage 0.471951 lowCoverage 0.4564797 0.515873 -0.0420340 6 0.442226 0.50577 -0.063540 5.1181e-01 9.1460e-03 weaklyHypometh 1.000000 3.2664e-01 insignificant 0.9681196 1.1225e-01 insignificant 1 1.0000e+00 insignificant -0.056637 3.0265e-01 lowCoverage 1.0000000 lowCoverage chr7 72462389 72463389 78273 ENSG00000202035 0.610783 154 6 0.36002 144 9 0.49150 207 8 0.72300 88 3 0.62454 198 7 0.46042 81 6 0.61515 252 10 0.524941 151 10 0.28650 160 8 0.56380 234 7 0.76095 311 10 0.59542 223 7 0.465293 296 7 0.644444 128 3 0.48388 299 8 0.531818 119 6 0.53236 98 5 0.43641 153 4 0.597675 335 7 0.475774 75 8 0.66462 98 4 0.270996 43 3 0.64950 163 10 0.485871 96 8 0.859184 27 4 0.59728 254 11 0.60584 207 7 0.44192 129 8 0.65525 237 6 0.540256 217 8 0.56050 276 10 0.58328 95 8 0.060179 225 11 0.101682 375 8 0.21086 253 4 0.200000 15 1 0.101988 126 10 0.116761 394 10 0.41237 177 6 0.46676 245 9 0.238928 70 6 0.44102 164 3 0.41614 141 5 0.545530 0.339168 0.54263 0.755378 0.656680 0.513607 0.594256 0.503150 0.537528 0.733123 0.750969 0.582818 0.452527 0.54850 0.470108 0.389782 0.574746 0.386828 0.630198 0.42578 0.78996 0.191346 0.645735 0.512214 0.787164 0.540684 0.658375 0.52758 0.563497 0.520153 0.503251 0.523420 0.045985 0.060365 0.084242 0.053947 0.048974 0.0660060 0.392451 0.442566 0.293154 0.351949 0.33464 3 0.54128 0.56124 -0.0029733 6 0.52148 0.53872 -0.0172323 0.744154 0.3267484 insignificant 1 1 insignificant 0.964190 0.1205900 insignificant 1 1 insignificant -0.03697369 0.45295 insignificant 1 insignificant 0.54128 0.0806916 0.4862142 7 0.52148 0.101791 0.41969208 1.1174e-38 1.0000e+00 hypermethylated 3.7246e-36 1.00000000 hypermethylated 2.2182e-16 1.000000 hypermethylated 1.1091e-13 1 hypermethylated 0.407322 2.5524e-09 hypermethylated 6.3809e-07 hypermethylated 0.54128 0.390704 0.1848597 4 0.52148 0.42158 0.0999038 5.8852e-08 9.6115e-01 lowCoverage 9.8087e-06 1.000000 lowCoverage 2.4296e-06 0.9705314 lowCoverage 8.0985e-04 1.00000 lowCoverage 1.4419e-01 0.01739433 weaklyHypermeth 1.00000 insignificant 0.56124 0.0806916 0.491972 6 0.53872 0.101791 0.4369244 2.7874e-29 1.0000e+00 hypermethylated 9.2912e-27 1.0000000 hypermethylated 2.2822e-15 1.000000 hypermethylated 1.1411e-12 1 hypermethylated 0.444296 8.1874e-08 hypermethylated 2.7291e-05 hypermethylated 0.56165 0.390213 0.1883909 4 0.55497 0.38915 0.1658180 4.9975e-06 0.99652528 lowCoverage 7.1392e-04 1.00000 lowCoverage 9.9752e-05 0.9975057 lowCoverage 2.4938e-02 1.00000 lowCoverage 0.18116673 8.3576e-03 weaklyHypermeth 1.000000 insignificant 0.0806916 0.390704 -0.3195550 4 0.101791 0.42158 -0.319788 1.0000e+00 1.4540e-14 lowCoverage 1.000000 4.8468e-12 lowCoverage 1.0000000 1.7663e-07 lowCoverage 1 5.8878e-05 lowCoverage -0.263129 9.2732e-04 hypomethylated 0.2318307 insignificant chr7 72481112 72482112 78274 ENSG00000202035 0.339052 64 4 0.35659 100 6 0.45273 93 6 0.30955 70 4 0.18155 31 4 0.07479 175 4 0.44940 45 4 0.196469 86 4 0.23926 49 4 0.24167 40 4 0.46105 77 4 0.49514 37 4 0.025000 94 4 NA 0 0 0.12745 70 4 0.269643 23 3 0.13782 48 4 0.13311 78 4 0.142460 47 4 0.247838 175 5 0.25823 34 4 0.028020 135 4 0.33718 108 6 0.241608 44 4 0.174507 71 4 0.27669 163 6 0.19015 79 4 0.18715 42 4 0.11394 63 4 0.188424 179 6 0.24775 152 6 0.57074 151 6 0.208837 214 6 0.020833 45 4 0.47018 234 4 0.041667 32 2 0.212088 56 4 0.196927 143 6 0.17903 114 4 0.16284 91 4 0.033120 62 4 0.22917 90 4 0.11706 128 4 0.198802 0.195557 0.34283 0.171280 0.190476 0.092485 0.447531 0.203331 0.244564 0.244170 0.461883 0.498765 0.026235 NA 0.122892 0.268078 0.134576 0.164141 0.142161 0.13583 0.26111 0.029470 0.238172 0.243706 0.171321 0.103204 0.190762 0.18872 0.111829 0.033402 0.077275 0.430418 0.056193 0.018519 0.328535 0.041152 0.216117 0.0642169 0.019417 0.077792 0.031339 0.097737 0.12017 4 0.23324 0.21540 0.0335555 4 0.34136 0.30504 0.0363147 0.202232 0.9395173 lowCoverage 1 1 lowCoverage 0.244000 0.8653323 lowCoverage 1 1 lowCoverage 0.02234015 0.65810 lowCoverage 1 lowCoverage 0.23324 0.2375691 0.1033185 4 0.34136 0.257742 0.08361588 1.6536e-03 9.8758e-01 lowCoverage 4.8636e-02 1.00000000 lowCoverage 6.7821e-05 0.989349 lowCoverage 3.5695e-03 1 lowCoverage 0.065116 4.0115e-01 lowCoverage 1.0000e+00 lowCoverage 0.23324 0.092784 0.1254615 4 0.34136 0.20511 0.1362479 8.8100e-04 9.9997e-01 lowCoverage 8.0091e-02 1.000000 lowCoverage 5.0018e-05 0.9995962 lowCoverage 6.2523e-03 1.00000 lowCoverage 1.1263e-01 0.02987301 lowCoverage 1.00000 lowCoverage 0.21540 0.2375691 0.070112 6 0.30504 0.257742 0.0473011 1.2178e-02 9.4492e-01 weaklyHypermeth 3.2914e-01 1.0000000 insignificant 1.3782e-03 0.996825 weaklyHypermeth 6.5630e-02 1 weaklyHypermeth 0.042776 5.8874e-01 lowCoverage 1.0000e+00 lowCoverage 0.21540 0.092784 0.0908903 4 0.30504 0.20511 0.0999332 1.0932e-02 0.99653671 lowCoverage 8.4090e-01 1.00000 lowCoverage 4.2490e-03 0.9997910 lowCoverage 4.2490e-01 1.00000 lowCoverage 0.09028909 9.7066e-02 lowCoverage 1.000000 lowCoverage 0.2375691 0.092784 0.0176524 4 0.257742 0.20511 0.052632 4.5469e-01 7.8462e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.6813014 8.7561e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.047513 5.3875e-01 lowCoverage 1.0000000 lowCoverage chr7 72720821 72721821 78277 VPS37D ENSG00000176428 0.777282 230 6 0.48756 174 5 0.51929 160 3 0.76170 257 8 0.50011 103 5 0.82614 361 9 0.61635 95 5 0.650013 155 5 0.55297 107 3 0.46984 155 3 0.66223 187 5 0.47717 77 3 0.719782 127 3 0.597316 129 3 0.40775 148 3 0.667045 64 3 0.33333 77 1 0.53776 237 7 0.686357 311 6 0.617870 212 5 0.44815 65 4 0.287719 43 3 0.52134 125 6 0.493579 132 7 0.456005 49 3 0.65368 223 6 0.48242 250 3 0.44476 47 4 0.51609 165 3 0.568127 226 6 0.60152 243 7 0.79442 264 8 0.376488 135 4 0.364063 163 3 0.27068 285 7 0.579764 135 4 0.406845 108 5 0.547433 246 9 0.54401 215 6 0.57504 226 7 0.519903 242 5 0.49822 268 4 0.38153 190 8 0.432587 0.344757 0.40911 0.397572 0.401779 0.533948 0.512550 0.374302 0.388137 0.455763 0.543884 0.423296 0.360895 0.47370 0.320633 0.355178 0.290929 0.407969 0.304230 0.40925 0.41710 0.238165 0.501882 0.399351 0.394601 0.372555 0.324600 0.21504 0.354166 0.374065 0.359753 0.559630 0.310281 0.363077 0.320891 0.336392 0.387391 0.3885101 0.344563 0.329634 0.310717 0.302022 0.29521 3 0.48454 0.44828 0.0134874 5 0.67884 0.60490 0.0739421 0.046577 0.6106017 weaklyHypermeth 1 1 insignificant 0.193692 0.8266895 insignificant 1 1 insignificant 0.07107508 0.13794 lowCoverage 1 lowCoverage 0.48439 0.3455056 0.1137819 5 0.65208 0.451232 0.20084302 1.4785e-08 9.2147e-01 weaklyHypermeth 7.0406e-07 1.00000000 weaklyHypermeth 2.2988e-04 0.977909 weaklyHypermeth 1.0449e-02 1 weaklyHypermeth 0.169182 1.4549e-02 lowCoverage 6.6133e-01 lowCoverage 0.48567 0.252853 0.1315832 5 0.71755 0.55152 0.1660328 1.7407e-06 9.9992e-01 weaklyHypermeth 1.9341e-04 1.000000 weaklyHypermeth 3.7415e-05 0.9992986 weaklyHypermeth 5.3450e-03 1.00000 weaklyHypermeth 8.9655e-02 0.06588129 lowCoverage 1.00000 lowCoverage 0.44743 0.3442164 0.097791 5 0.55361 0.416522 0.1370925 3.5855e-05 8.4683e-01 weaklyHypermeth 1.3790e-03 1.0000000 weaklyHypermeth 2.1324e-03 0.939608 weaklyHypermeth 8.8850e-02 1 weaklyHypermeth 0.098107 1.3177e-01 insignificant 1.0000e+00 insignificant 0.44818 0.252410 0.1028531 5 0.57413 0.50909 0.0650333 8.4739e-04 0.97871579 weaklyHypermeth 8.4739e-02 1.00000 weaklyHypermeth 8.5441e-03 0.9890479 weaklyHypermeth 7.7673e-01 1.00000 insignificant 0.01857963 7.1122e-01 insignificant 1.000000 insignificant 0.3455399 0.251097 0.0087644 5 0.439328 0.46819 -0.028858 2.2901e-01 7.2294e-02 insignificant 1.000000 1.0000e+00 insignificant 0.4880954 1.7974e-01 insignificant 1 1.0000e+00 insignificant -0.079527 2.0777e-01 insignificant 1.0000000 insignificant chr7 72758118 72759118 78278 WBSCR22 ENSG00000071462 0.765231 172 5 0.70898 215 6 0.64945 244 6 0.86480 141 6 0.81579 220 6 0.87948 409 6 0.77660 263 6 0.793470 223 6 0.75821 204 6 0.82722 219 6 0.75940 309 6 0.76292 106 6 0.620085 217 6 0.753427 110 6 0.71041 227 6 0.829719 102 6 0.84375 25 2 0.59745 204 5 0.783087 286 6 0.738580 339 6 0.84902 110 5 0.733333 26 2 0.82316 165 6 0.818806 133 6 0.755556 36 3 0.70835 254 6 0.51852 304 6 0.54778 97 6 0.69713 215 6 0.874778 242 6 0.76272 276 6 0.85911 324 6 0.508670 213 6 0.621215 217 6 0.54943 277 4 0.472222 24 1 0.541590 163 6 0.228042 354 6 0.82618 193 5 0.70739 232 5 0.831034 110 4 0.69372 119 4 0.50694 150 6 0.833201 0.685914 0.76519 0.828920 0.798345 0.832172 0.713659 0.776495 0.720745 0.831209 0.838641 0.772262 0.561285 0.83426 0.826889 0.834535 0.880042 0.570943 0.725757 0.83247 0.81265 0.750207 0.813722 0.771421 0.665455 0.839838 0.623845 0.83035 0.798283 0.828670 0.770783 0.764701 0.630159 0.712010 0.679129 0.576122 0.680230 0.2585623 0.723527 0.721540 0.766157 0.721163 0.57645 4 0.77376 0.77717 -0.0070131 6 0.79481 0.69601 0.0988014 0.672757 0.8545892 insignificant 1 1 insignificant 0.857355 0.8871541 insignificant 1 1 insignificant 0.01621479 0.67041 insignificant 1 insignificant 0.77334 0.5176282 0.2566157 6 0.73925 0.346548 0.39270593 1.4431e-10 1.0000e+00 hypermethylated 7.5954e-09 1.00000000 hypermethylated 2.7321e-04 1.000000 hypermethylated 1.1879e-02 1 hypermethylated 0.275043 3.2591e-03 lowCoverage 2.1727e-01 lowCoverage 0.77318 0.703980 0.0582816 5 0.68710 0.64217 0.0449321 1.3010e-01 9.1798e-01 insignificant 1.0000e+00 1.000000 insignificant 1.3586e-01 0.9705388 insignificant 1.0000e+00 1.00000 insignificant 4.8853e-02 0.46464261 lowCoverage 1.00000 lowCoverage 0.77875 0.5184591 0.281782 6 0.71854 0.415858 0.3026854 3.6999e-11 9.9919e-01 hypermethylated 3.0832e-09 1.0000000 hypermethylated 9.5915e-06 0.999957 hypermethylated 7.3781e-04 1 hypermethylated 0.258828 3.3348e-03 lowCoverage 2.2232e-01 lowCoverage 0.77711 0.704857 0.0611122 5 0.63171 0.71353 -0.0818107 5.7441e-02 0.57498390 insignificant 1.0000e+00 1.00000 insignificant 1.3294e-01 0.7980020 insignificant 1.0000e+00 1.00000 insignificant 0.03263814 6.4533e-01 lowCoverage 1.000000 lowCoverage 0.5180723 0.705736 -0.2164377 5 0.350953 0.71353 -0.362572 9.9783e-01 2.5421e-03 weaklyHypometh 1.000000 1.2105e-01 insignificant 0.9757102 9.6341e-03 weaklyHypometh 1 6.4227e-01 insignificant -0.226190 2.1605e-02 lowCoverage 0.9820599 lowCoverage chr7 72921073 72922073 78279 WBSCR28 ENSG00000175877 0.703202 198 8 0.67420 224 10 0.70116 186 10 0.67709 179 7 0.62835 208 10 0.81396 252 9 0.66710 200 10 0.578687 166 10 0.59191 176 10 0.73548 166 10 0.65554 290 10 0.58155 265 10 0.766982 239 10 NA 0 0 0.74198 191 8 0.593591 299 9 0.64328 291 9 0.63893 188 6 0.784746 226 10 0.717771 166 10 0.80352 104 9 0.487871 73 7 0.75880 114 9 0.643382 109 8 0.839205 89 5 0.61071 197 10 0.76619 57 7 0.63288 77 7 0.72976 110 10 0.616514 240 10 0.68686 189 10 0.71503 284 9 0.432059 131 10 0.428851 234 10 0.28336 244 7 0.711386 53 4 0.496272 112 9 0.693748 192 10 0.67721 131 7 0.81371 219 7 0.725309 89 5 0.76663 161 9 0.70030 237 8 0.714682 0.596305 0.65036 0.732888 0.501616 0.821074 0.603427 0.518697 0.510101 0.620680 0.591186 0.399528 0.671986 NA 0.643233 0.464681 0.522262 0.728572 0.662358 0.79876 0.71765 0.710330 0.740365 0.532508 0.771382 0.598604 0.751051 0.58927 0.648949 0.656932 0.701637 0.737711 0.539245 0.493578 0.598046 0.680101 0.585605 0.6968051 0.852390 0.817246 0.745045 0.793626 0.82698 3 0.57960 0.68739 -0.0417481 10 0.67587 0.68343 -0.0075597 0.298025 0.1438509 insignificant 1 1 insignificant 0.786129 0.3089262 insignificant 1 1 insignificant -0.01218146 0.71238 insignificant 1 insignificant 0.57932 0.4725389 0.1240650 10 0.61443 0.506168 0.10826378 4.6289e-24 8.9948e-02 weaklyHypermeth 1.1572e-21 1.00000000 weaklyHypermeth 1.2343e-05 0.415611 weaklyHypermeth 9.1926e-04 1 weaklyHypermeth 0.171098 5.2873e-02 insignificant 1.0000e+00 insignificant 0.57932 0.802867 -0.1698691 7 0.61443 0.70677 -0.0923372 8.6757e-01 6.4796e-05 weaklyHypometh 1.0000e+00 0.064796 weaklyHypometh 7.7932e-01 0.0621727 insignificant 1.0000e+00 1.00000 insignificant -5.7921e-02 0.08225466 insignificant 1.00000 insignificant 0.68697 0.4725389 0.170206 10 0.62130 0.506168 0.1151362 7.1587e-10 6.7352e-01 weaklyHypermeth 3.9771e-08 1.0000000 weaklyHypermeth 1.8031e-03 0.878928 weaklyHypermeth 8.0084e-02 1 weaklyHypermeth 0.183280 4.2605e-02 weaklyHypermeth 1.0000e+00 insignificant 0.68739 0.804790 -0.0925752 7 0.68343 0.77745 -0.0940112 7.6945e-01 0.00066808 weaklyHypometh 1.0000e+00 0.22269 insignificant 6.4703e-01 0.0442583 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.04573944 2.4165e-01 insignificant 1.000000 insignificant 0.4725389 0.802867 -0.2249801 7 0.506168 0.70677 -0.200601 8.0429e-01 6.1813e-06 hypomethylated 1.000000 6.1813e-04 hypomethylated 0.8599605 1.4710e-02 weaklyHypometh 1 8.1464e-01 insignificant -0.229019 1.8256e-02 weaklyHypometh 0.9266398 insignificant chr7 72945455 72946455 78281 WBSCR28 ENSG00000175877 0.948338 187 5 0.86298 173 5 0.73505 58 5 0.89394 214 5 1.00000 54 3 0.59648 230 5 0.94643 54 3 0.919253 96 5 0.86310 23 3 0.96591 71 3 0.95070 143 5 0.88889 9 0 0.888889 18 3 0.971429 20 3 0.82143 51 3 1.000000 9 0 NA 0 0 0.86053 337 5 0.918627 176 5 0.962840 150 5 1.00000 16 0 0.763636 38 3 0.88348 97 5 1.000000 26 2 0.934011 312 5 0.88333 152 5 0.86381 73 3 1.00000 6 0 0.87988 111 5 0.960299 136 5 0.90190 106 5 0.95692 172 5 0.317976 119 5 0.227927 141 5 NA 0 0 0.496354 156 5 0.235556 137 5 0.845758 178 5 0.85325 164 5 0.94303 166 5 0.829012 189 5 0.96905 90 5 0.74365 132 5 0.969143 0.850342 0.69175 0.914572 1.000000 0.864634 0.892857 0.918841 0.863095 0.909091 0.962684 0.888889 0.888889 0.93333 0.976190 1.000000 NA 0.854500 0.947712 0.94107 1.00000 0.939394 0.891667 1.000000 0.940826 0.894444 0.939683 1.00000 0.890702 0.990476 1.000000 0.966667 0.461538 0.246545 NA 0.294118 0.380247 0.9550505 0.934909 0.951220 0.910422 0.976190 0.86223 0 0.89704 0.92530 -0.0291524 5 0.91072 0.92931 -0.0185905 0.932682 0.0116111 weaklyHypometh 1 1 insignificant 0.663849 0.1385625 insignificant 1 1 insignificant -0.02447648 0.42457 lowCoverage 1 lowCoverage 0.89699 0.5006840 0.3920874 5 0.89286 0.498530 0.39433371 1.6696e-15 1.0000e+00 hypermethylated 1.5178e-13 1.00000000 hypermethylated 1.1991e-09 1.000000 hypermethylated 2.3982e-07 1 hypermethylated 0.469749 1.4186e-02 lowCoverage 6.6133e-01 lowCoverage 0.89699 0.883941 0.0049494 5 0.89286 0.86878 0.0240803 2.2744e-01 4.6988e-01 insignificant 1.0000e+00 1.000000 insignificant 1.9529e-01 0.8610202 insignificant 1.0000e+00 1.00000 insignificant 2.6865e-02 0.58150973 lowCoverage 1.00000 lowCoverage 0.92524 0.5006840 0.419802 5 0.91517 0.498530 0.4166424 3.4106e-12 1.0000e+00 hypermethylated 3.4106e-10 1.0000000 hypermethylated 4.6078e-08 1.000000 hypermethylated 9.2156e-06 1 hypermethylated 0.494226 1.2026e-02 lowCoverage 6.6811e-01 lowCoverage 0.92524 0.883941 0.0346393 5 0.91517 0.86878 0.0463890 5.1522e-02 0.96550733 insignificant 1.0000e+00 1.00000 insignificant 9.5597e-02 0.9862658 insignificant 1.0000e+00 1.00000 insignificant 0.05134113 3.0097e-01 lowCoverage 1.000000 lowCoverage 0.5006840 0.883941 -0.3741983 5 0.498530 0.86878 -0.370253 1.0000e+00 6.3570e-05 hypomethylated 1.000000 5.2975e-03 hypomethylated 0.9999998 1.3704e-04 hypomethylated 1 2.2840e-02 hypomethylated -0.442885 1.5571e-02 lowCoverage 0.9159287 lowCoverage chr7 72946605 72947605 78282 WBSCR28 ENSG00000175877 0.790724 174 10 0.72321 93 6 0.70224 139 10 0.87343 223 10 0.78592 75 7 0.80623 217 10 0.81261 101 10 0.871212 95 10 0.75740 98 7 0.88853 138 10 0.71740 148 10 0.80236 89 7 0.658869 150 7 0.925044 74 3 0.77619 128 7 0.910628 137 7 0.66667 12 0 0.32308 198 9 0.688725 97 10 0.874590 89 10 0.82083 43 2 0.761323 191 10 0.86176 66 7 0.722488 78 8 0.682495 320 10 0.78975 75 7 0.74305 192 11 0.52637 72 4 0.90137 113 7 0.896533 92 6 0.80356 72 3 0.80838 163 10 0.000000 170 9 0.000000 325 10 0.00000 220 5 0.000000 214 10 0.029915 191 9 0.024170 309 10 0.73539 144 7 0.88895 99 7 0.918515 95 7 0.83000 79 10 0.75337 154 7 0.850750 0.600520 0.77286 0.882825 0.746182 0.880656 0.923769 0.960114 0.790696 0.929033 0.874191 0.724494 0.812220 0.88948 0.802749 0.956154 0.926975 0.420836 0.823302 0.86743 0.89133 0.768079 0.968283 0.873530 0.754178 0.832266 0.829455 0.75540 0.869066 0.925982 0.866922 0.833120 0.000000 0.000000 0.000000 0.000000 0.017501 0.0050003 0.786454 0.940404 0.928032 0.928205 0.74915 3 0.80242 0.80704 -0.0099890 10 0.72350 0.70905 0.0144470 0.773170 0.7258429 insignificant 1 1 insignificant 0.911902 0.4942907 insignificant 1 1 insignificant -0.00874040 0.83662 insignificant 1 insignificant 0.80242 0.0048985 0.7976286 10 0.72350 0.022958 0.70053913 6.6051e-80 1.0000e+00 hypermethylated 6.6051e-77 1.00000000 hypermethylated 2.9888e-24 1.000000 hypermethylated 2.9888e-21 1 hypermethylated 0.758739 8.4615e-17 hypermethylated 8.4615e-14 hypermethylated 0.80242 0.823117 -0.0164592 7 0.72350 0.76782 -0.0443203 6.2517e-01 2.7889e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7469e-01 0.2766360 insignificant 1.0000e+00 1.00000 insignificant -5.7491e-02 0.24564189 insignificant 1.00000 insignificant 0.80704 0.0048985 0.804609 10 0.70905 0.022958 0.6860921 1.6798e-83 1.0000e+00 hypermethylated 1.6798e-80 1.0000000 hypermethylated 6.4906e-22 1.000000 hypermethylated 6.4906e-19 1 hypermethylated 0.767480 1.1869e-11 hypermethylated 5.9343e-09 hypermethylated 0.80704 0.823117 -0.0039717 7 0.70905 0.76782 -0.0587674 6.9073e-01 0.21261787 insignificant 1.0000e+00 1.00000 insignificant 9.1166e-01 0.4085383 insignificant 1.0000e+00 1.00000 insignificant -0.04875017 3.2249e-01 insignificant 1.000000 insignificant 0.0048985 0.823117 -0.8188880 7 0.022958 0.76782 -0.744859 1.0000e+00 2.4969e-53 hypomethylated 1.000000 2.4969e-50 hypomethylated 1.0000000 2.9582e-15 hypomethylated 1 2.9582e-12 hypomethylated -0.816230 1.5749e-05 hypomethylated 0.0078746 hypomethylated chr7 72956801 72957801 78283 WBSCR28 ENSG00000175877 0.892386 383 8 0.66261 143 7 0.74491 151 8 0.92204 304 8 0.85387 90 7 0.87295 368 8 0.71101 98 6 0.896645 224 8 0.79693 123 8 0.64046 127 8 0.86338 292 9 0.93457 56 8 0.891885 152 7 0.753373 111 6 0.90578 165 7 0.035714 15 0 0.92857 15 1 0.74598 314 7 0.854174 295 8 0.893012 373 8 0.89225 105 7 0.873583 83 8 0.85018 247 7 0.969877 80 6 0.643755 102 8 0.89458 213 8 0.71908 210 7 0.75273 39 2 0.73901 226 7 0.855979 262 8 0.92124 290 9 0.89212 358 8 0.153061 247 9 0.013211 431 7 0.14840 310 6 0.250000 19 3 0.096424 215 8 0.333350 362 8 0.76716 276 8 0.86707 279 8 0.838875 281 8 0.67469 343 7 0.71267 190 7 0.911261 0.727581 0.75561 0.897987 0.878201 0.887875 0.808752 0.885748 0.764303 0.843476 0.883307 0.891967 0.894525 0.78551 0.886581 0.021181 0.848191 0.691526 0.901191 0.88331 0.92199 0.879894 0.851080 0.983434 0.785606 0.865883 0.858734 0.81842 0.813472 0.836696 0.931882 0.899516 0.080896 0.011292 0.044824 0.039639 0.097967 0.2099774 0.792688 0.838800 0.827097 0.778970 0.64628 6 0.85258 0.86953 -0.0184652 7 0.83114 0.79497 0.0361741 0.615095 0.1343369 insignificant 1 1 insignificant 0.883063 0.0114991 weaklyHypometh 1 1 insignificant -0.04368540 0.41321 insignificant 1 insignificant 0.85262 0.1054293 0.7334260 7 0.84521 0.206903 0.63830747 1.7919e-76 1.0000e+00 hypermethylated 8.9596e-74 1.00000000 hypermethylated 2.1549e-15 1.000000 hypermethylated 7.1829e-13 1 hypermethylated 0.624272 6.2475e-08 hypermethylated 7.8093e-06 hypermethylated 0.85258 0.804967 0.0486507 7 0.83114 0.71852 0.1126208 8.4034e-02 9.7657e-01 insignificant 1.0000e+00 1.000000 insignificant 7.5108e-02 0.9572836 insignificant 1.0000e+00 1.00000 insignificant 1.7917e-02 0.75922944 insignificant 1.00000 insignificant 0.86953 0.1054959 0.747708 7 0.79497 0.225713 0.5692523 2.6379e-65 1.0000e+00 hypermethylated 1.3189e-62 1.0000000 hypermethylated 2.2699e-14 1.000000 hypermethylated 7.5662e-12 1 hypermethylated 0.667957 6.9637e-07 hypermethylated 1.7409e-04 hypermethylated 0.86953 0.804967 0.0698482 7 0.79497 0.71852 0.0764467 3.3228e-03 0.98702545 weaklyHypermeth 3.0207e-01 1.00000 insignificant 3.7137e-03 0.9940662 weaklyHypermeth 4.1263e-01 1.00000 insignificant 0.06160288 2.1303e-01 insignificant 1.000000 insignificant 0.1054959 0.804967 -0.7087954 7 0.225713 0.71852 -0.492806 1.0000e+00 2.9063e-34 hypomethylated 1.000000 1.4531e-31 hypomethylated 1.0000000 7.7026e-10 hypomethylated 1 3.8513e-07 hypomethylated -0.606354 3.0717e-06 hypomethylated 0.0030717 hypomethylated chr7 73103222 73104222 78285 ELN ENSG00000049540 0.844110 165 4 0.78689 196 5 0.73926 172 5 0.83520 167 3 0.76612 108 5 0.72062 228 4 0.77372 156 5 0.793932 121 5 0.78349 146 5 0.83736 130 5 0.89295 185 5 0.75454 80 5 0.775403 182 5 0.700000 26 3 0.84664 152 5 0.774731 61 4 0.51717 32 3 0.88236 207 3 0.743038 169 5 0.844402 126 3 0.75667 74 5 0.789016 86 3 0.88985 93 5 0.700479 67 4 0.708251 121 3 0.87405 208 5 0.80595 68 4 0.87880 57 5 0.87050 168 5 0.881541 236 5 0.91552 209 5 0.82548 148 5 0.375654 162 5 0.498972 111 5 0.99805 154 3 0.233974 82 1 0.678677 90 4 0.614957 179 5 0.86687 110 3 0.90565 124 3 0.756094 132 3 0.79846 117 3 0.59759 113 3 0.778115 0.672044 0.66345 0.795157 0.643539 0.837627 0.800328 0.669888 0.752006 0.718925 0.863764 0.579381 0.688604 0.88989 0.693751 0.637864 0.396834 0.775858 0.659087 0.77669 0.70651 0.683748 0.753320 0.876299 0.648459 0.833095 0.660592 0.82231 0.809361 0.830477 0.851078 0.823268 0.551800 0.781032 0.892827 0.515269 0.779859 0.7275841 0.788608 0.860265 0.714302 0.725151 0.74225 2 0.77707 0.80965 -0.0382063 5 0.67607 0.71267 -0.0365948 0.999882 0.0062987 weaklyHypometh 1 1 insignificant 0.999975 0.0247250 weaklyHypometh 1 1 insignificant -0.04407805 0.12524 lowCoverage 1 lowCoverage 0.77734 0.7133676 0.0763834 5 0.81129 0.550848 0.26043994 1.3029e-17 2.2638e-02 weaklyHypermeth 1.3029e-15 1.00000000 weaklyHypermeth 5.7934e-05 0.021288 weaklyHypermeth 3.2185e-03 1 weaklyHypermeth 0.213884 1.0622e-01 lowCoverage 1.0000e+00 lowCoverage 0.77734 0.755034 -0.0237227 3 0.81129 0.83556 -0.0242702 8.0680e-01 1.9125e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.8646e-01 0.0525109 lowCoverage 1.0000e+00 1.00000 lowCoverage -4.3356e-03 0.94190274 lowCoverage 1.00000 lowCoverage 0.81018 0.7133676 0.108472 5 0.85520 0.550848 0.3043537 1.9287e-13 1.0200e-01 weaklyHypermeth 2.4109e-11 1.0000000 weaklyHypermeth 5.1448e-05 0.179513 weaklyHypermeth 3.4298e-03 1 weaklyHypermeth 0.257962 6.3113e-02 lowCoverage 1.0000e+00 lowCoverage 0.81018 0.755034 0.0113020 3 0.85520 0.83556 0.0196436 1.7754e-01 0.71946133 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.2292e-01 0.5138468 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.03974242 5.1903e-01 lowCoverage 1.000000 lowCoverage 0.7133676 0.755034 0.0179887 3 0.550848 0.83556 -0.284710 1.5586e-01 1.3940e-04 lowCoverage 1.000000 1.0723e-02 lowCoverage 0.3000427 1.7556e-02 lowCoverage 1 8.7781e-01 lowCoverage -0.218219 1.1296e-01 lowCoverage 1.0000000 lowCoverage chr7 73495544 73496544 78286 CLIP2 ENSG00000106665 0.882505 202 6 0.82619 82 6 0.90128 68 6 0.92438 220 5 0.91945 68 5 0.89827 260 6 0.90964 148 5 0.894286 78 4 0.90667 60 4 0.84945 40 4 0.94698 201 6 0.75000 32 2 0.957231 53 4 0.809524 15 2 0.85000 43 4 0.901786 38 4 0.75000 10 1 0.75497 114 3 0.900327 68 4 0.880444 127 5 0.76952 59 4 0.000000 3 0 0.82214 73 6 0.956710 60 6 0.906060 158 4 0.78941 151 6 0.83070 52 4 0.98000 28 2 0.78056 59 6 0.877776 145 6 0.78411 104 6 0.89777 158 6 0.598825 141 6 0.545365 133 6 0.00000 1 0 0.691176 50 4 0.673857 120 6 0.550997 153 6 0.18618 126 6 0.37057 135 6 0.470099 81 5 0.76515 27 2 0.52378 151 5 0.890395 0.816667 0.89106 0.936176 0.891042 0.896782 0.956388 0.953846 0.951903 0.822485 0.932405 0.673077 0.974766 0.74655 0.792308 0.950549 0.838243 0.725749 0.897939 0.88541 0.80455 0.683246 0.857751 0.914918 0.879370 0.921499 0.849047 0.94253 0.737179 0.869829 0.859944 0.940750 0.646647 0.662633 NA 0.710407 0.812061 0.3934911 0.177629 0.301071 0.438605 0.843823 0.46437 0 0.89351 0.87429 0.0145708 6 0.90118 0.80143 0.0997540 0.232944 0.7475922 insignificant 1 1 insignificant 0.403681 0.6493919 insignificant 1 1 insignificant 0.08777283 0.26708 lowCoverage 1 lowCoverage 0.89351 0.6120401 0.2737344 6 0.90118 0.582453 0.31872670 7.6556e-15 1.0000e+00 hypermethylated 6.3797e-13 1.00000000 hypermethylated 1.5360e-06 0.999996 hypermethylated 1.3963e-04 1 hypermethylated 0.360631 1.8114e-02 lowCoverage 7.5477e-01 lowCoverage 0.89334 0.401163 0.5024128 6 0.91353 0.42291 0.4906181 2.8338e-33 1.0000e+00 hypermethylated 2.8338e-30 1.000000 hypermethylated 2.3354e-09 1.0000000 hypermethylated 2.3354e-06 1.00000 hypermethylated 4.0751e-01 0.01202555 lowCoverage 0.92504 lowCoverage 0.87429 0.6120401 0.259596 6 0.80143 0.582453 0.2189727 1.2195e-09 9.9977e-01 hypermethylated 6.4184e-08 1.0000000 hypermethylated 7.3215e-05 0.999809 hypermethylated 4.3068e-03 1 hypermethylated 0.272859 5.9396e-02 lowCoverage 1.0000e+00 lowCoverage 0.87584 0.399610 0.4845387 6 0.87944 0.39722 0.4822222 7.7222e-24 1.00000000 hypermethylated 7.7222e-21 1.00000 hypermethylated 1.5090e-08 1.0000000 hypermethylated 1.5090e-05 1.00000 hypermethylated 0.31973881 2.5928e-02 lowCoverage 1.000000 lowCoverage 0.6134454 0.399610 0.2354602 6 0.623973 0.39722 0.226754 9.4762e-05 9.9556e-01 hypermethylated 0.023690 1.0000e+00 hypermethylated 0.0079807 9.9681e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.046880 7.4805e-01 lowCoverage 1.0000000 lowCoverage chr7 74082999 74083999 78290 ENSG00000212837 0.948858 78 5 0.92381 65 5 0.97417 73 5 0.98667 56 5 0.97143 26 4 0.95248 67 5 0.98182 44 5 0.899874 52 5 0.96923 49 5 0.95128 34 5 0.96000 44 5 0.90227 40 5 1.000000 36 5 NA 0 0 0.96667 44 5 1.000000 14 1 0.90833 48 5 0.97063 64 5 0.977778 32 4 0.928889 67 5 1.00000 9 0 0.989474 58 5 0.90378 80 5 1.000000 17 1 0.983333 36 5 0.97500 35 5 0.84744 28 3 1.00000 19 1 0.97143 39 5 0.971429 68 5 0.91825 53 5 0.96774 118 5 1.000000 38 5 0.904762 18 1 1.00000 5 1 0.766667 10 1 1.000000 21 1 0.946429 39 5 0.99091 33 2 1.00000 66 5 0.958120 70 5 0.97128 73 5 0.96083 88 5 0.946472 0.883658 0.98516 0.969697 0.935065 0.938751 0.984848 0.882786 0.930070 0.937257 0.937879 0.825241 1.000000 NA 0.987374 1.000000 0.938342 0.965248 0.981481 0.91751 0.99779 0.976077 0.884640 1.000000 0.962121 0.943182 0.876970 1.00000 0.989177 0.982684 0.871873 0.964902 1.000000 0.884560 NA 0.757576 1.000000 0.9594156 0.979339 1.000000 0.957265 0.956876 0.97948 1 0.94855 0.95179 -0.0022564 5 0.95300 0.95516 -0.0021518 0.696729 0.6314591 insignificant 1 1 insignificant 0.913705 0.4447938 insignificant 1 1 insignificant -0.00412020 0.79116 lowCoverage 1 lowCoverage 0.94855 0.9541985 -0.0095052 1 0.95300 0.952784 0.00022047 1.5837e-01 3.2271e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 7.0824e-01 0.247389 lowCoverage 1.0000e+00 1 lowCoverage 0.020227 6.1676e-01 lowCoverage 1.0000e+00 lowCoverage 0.94855 0.969697 -0.0218355 5 0.95300 0.97038 -0.0173726 9.3891e-01 1.4457e-01 insignificant 1.0000e+00 1.000000 insignificant 9.5577e-01 0.2180856 insignificant 1.0000e+00 1.00000 insignificant -1.9692e-02 0.09885664 lowCoverage 1.00000 lowCoverage 0.95179 0.9541985 -0.005488 1 0.95516 0.952784 0.0023723 3.7245e-01 3.5602e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.8782e-01 0.433519 lowCoverage 1.0000e+00 1 lowCoverage 0.024347 5.6217e-01 lowCoverage 1.0000e+00 lowCoverage 0.95179 0.969697 -0.0191632 5 0.95516 0.97038 -0.0152208 8.4504e-01 0.18539271 insignificant 1.0000e+00 1.00000 insignificant 8.6009e-01 0.5194315 insignificant 1.0000e+00 1.00000 insignificant -0.01557214 3.4292e-01 lowCoverage 1.000000 lowCoverage 0.9541985 0.969697 -0.0161506 1 0.952784 0.97038 -0.017593 4.5599e-01 2.9630e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.5058371 6.2910e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.039919 3.4150e-01 lowCoverage 1.0000000 lowCoverage chr7 74841579 74842579 78293 ENSG00000174368 0.583929 35 4 0.62040 67 6 0.35913 73 7 0.84127 43 4 0.70312 43 2 0.70063 133 7 0.82619 93 4 0.686720 70 7 0.79524 61 7 0.74464 39 4 0.81766 128 8 0.72500 57 3 0.710216 52 5 0.760000 18 2 0.67031 53 4 0.744444 30 2 0.75385 35 2 0.29082 29 3 0.932540 63 5 0.721147 98 5 0.76771 42 4 0.579365 36 3 0.59970 44 5 0.839450 53 6 0.571728 110 4 0.76278 112 8 0.91607 39 3 0.73778 19 2 0.85488 43 5 0.861131 103 7 0.78798 87 7 0.74965 101 4 0.492416 119 9 0.533681 84 8 0.54352 75 8 0.268754 70 7 0.503351 49 4 0.502500 121 8 0.55450 48 7 0.45109 72 8 0.397917 37 5 0.46667 11 0 0.56667 40 4 0.722517 0.680509 0.48594 0.827038 0.787500 0.615822 0.857347 0.771109 0.747508 0.834694 0.814403 0.752355 0.750508 0.83724 0.756746 0.761387 0.870659 0.504891 0.933030 0.64336 0.75298 0.595357 0.747109 0.773230 0.576817 0.726257 0.934694 0.83127 0.840368 0.906400 0.717314 0.777133 0.395680 0.424739 0.476403 0.194997 0.474717 0.4872298 0.554966 0.449989 0.390714 0.616515 0.64320 0 0.71911 0.76046 -0.0322008 4 0.71051 0.75439 -0.0438848 0.970585 0.1238744 lowCoverage 1 1 lowCoverage 0.941070 0.1458076 lowCoverage 1 1 lowCoverage -0.05298923 0.27058 lowCoverage 1 lowCoverage 0.71721 0.4729730 0.2671994 4 0.66860 0.445361 0.22323739 1.0593e-10 9.9977e-01 lowCoverage 5.8848e-09 1.00000000 lowCoverage 8.7634e-05 0.999490 lowCoverage 4.3817e-03 1 lowCoverage 0.225326 1.1939e-03 lowCoverage 9.9489e-02 lowCoverage 0.71721 0.572115 0.1724940 2 0.66860 0.47874 0.1898544 1.2445e-07 9.4244e-01 lowCoverage 1.7779e-05 1.000000 lowCoverage 3.0472e-05 0.9452516 lowCoverage 5.0787e-03 1.00000 lowCoverage 2.1199e-01 0.00043628 lowCoverage 0.20034 lowCoverage 0.76046 0.4785156 0.295472 6 0.75439 0.501031 0.2533602 1.3894e-10 1.0000e+00 hypermethylated 9.2623e-09 1.0000000 hypermethylated 2.3306e-05 0.999974 hypermethylated 1.6647e-03 1 hypermethylated 0.278315 2.6929e-04 lowCoverage 2.2441e-02 lowCoverage 0.76046 0.581281 0.1991351 4 0.75439 0.51359 0.2408043 2.4838e-07 0.98118480 lowCoverage 4.1397e-05 1.00000 lowCoverage 1.8911e-05 0.9998318 lowCoverage 6.3036e-03 1.00000 lowCoverage 0.26498420 8.8862e-05 lowCoverage 0.088862 lowCoverage 0.4729730 0.572115 -0.0987736 5 0.445361 0.47874 -0.033383 1.6115e-01 1.1228e-03 weaklyHypometh 1.000000 6.6045e-02 weaklyHypometh 0.3009658 7.9279e-02 insignificant 1 1.0000e+00 insignificant -0.013331 8.0614e-01 lowCoverage 1.0000000 lowCoverage chr7 75750330 75751330 78309 SRRM3 ENSG00000177679 0.097488 207 7 0.18628 211 8 0.26538 259 8 0.00813 105 5 0.12471 172 8 0.26163 252 6 0.20855 313 8 0.086014 238 8 0.12686 273 8 0.18084 250 8 0.27999 320 8 0.14183 310 8 0.065937 310 8 0.035714 15 1 0.10669 259 8 0.121044 209 8 0.10582 244 7 0.19060 145 5 0.087449 262 8 0.091287 226 8 0.18847 99 8 0.074074 126 6 0.20224 213 8 0.060847 86 5 0.059913 206 5 0.13313 264 8 0.14685 129 8 0.25281 95 5 0.10343 213 8 0.094114 318 8 0.18742 236 8 0.16827 275 7 0.206078 191 8 0.262975 230 8 0.52296 106 4 0.000000 124 5 0.321726 53 4 0.246225 168 8 0.09146 128 5 0.16652 218 8 0.200000 104 4 0.12131 178 5 0.11424 95 4 0.050068 0.091557 0.16750 0.017438 0.057756 0.159915 0.065358 0.041377 0.079026 0.087362 0.070355 0.063844 0.045207 NA 0.052153 0.110652 0.053667 0.064198 0.058473 0.05346 0.11271 0.015576 0.060018 0.022141 0.092944 0.085858 0.068574 0.06723 0.054821 0.028349 0.028889 0.091805 0.081676 0.232177 0.243784 0.021770 0.140237 0.0500436 0.082317 0.109501 0.070561 0.072755 0.13054 3 0.14408 0.11549 0.0128867 8 0.20835 0.16049 0.0478550 0.116487 0.9960525 insignificant 1 1 insignificant 0.118306 0.9450422 insignificant 1 1 insignificant -0.00068503 0.97801 insignificant 1 insignificant 0.14476 0.2701149 -0.1031473 8 0.25001 0.267677 -0.01766498 5.0213e-01 8.3085e-07 weaklyHypometh 1.0000e+00 0.00027695 weaklyHypometh 3.1962e-01 0.152029 insignificant 1.0000e+00 1 insignificant -0.121382 1.4270e-01 insignificant 1.0000e+00 insignificant 0.14333 0.065007 0.0020576 5 0.13543 0.13909 -0.0036537 4.2816e-01 6.3257e-02 insignificant 1.0000e+00 1.000000 insignificant 4.0222e-01 0.2575271 insignificant 1.0000e+00 1.00000 insignificant -9.4856e-05 0.99713581 insignificant 1.00000 insignificant 0.11549 0.2710496 -0.116723 8 0.16049 0.294444 -0.1339531 8.1181e-01 8.8773e-06 weaklyHypometh 1.0000e+00 0.0022193 weaklyHypometh 8.6990e-01 0.063571 insignificant 1.0000e+00 1 insignificant -0.120697 1.4508e-01 insignificant 1.0000e+00 insignificant 0.11388 0.065007 -0.0181927 5 0.12249 0.13909 -0.0165974 7.2815e-01 0.04397132 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.6403e-01 0.0929200 insignificant 1.0000e+00 1.00000 insignificant 0.00059017 9.8268e-01 insignificant 1.000000 insignificant 0.2711472 0.065007 0.0373849 5 0.243055 0.13909 0.103969 9.9486e-03 1.6047e-02 weaklyHypermeth 1.000000 5.5333e-01 insignificant 0.4415140 1.3581e-01 insignificant 1 1.0000e+00 insignificant 0.121288 1.4451e-01 insignificant 1.0000000 insignificant chr7 76313459 76314459 78344 ENSG00000221249 0.806973 373 10 0.83761 195 8 0.73251 245 7 0.91071 314 10 0.97597 407 5 0.81611 284 13 0.83249 355 10 0.778301 166 8 0.83766 289 6 0.86418 265 5 0.89670 300 8 0.84539 293 5 0.793189 277 8 0.921949 186 5 0.86852 309 8 0.941549 266 5 0.83353 493 5 0.85682 379 13 0.927015 132 9 0.819190 251 13 0.86887 98 8 0.851444 124 7 0.89182 307 10 0.766708 88 6 0.902778 97 7 0.87078 276 12 0.69382 180 8 0.89192 93 5 0.85613 185 7 0.896717 201 10 0.81989 204 10 0.81201 324 10 0.797634 253 8 0.785503 135 10 0.83095 273 10 0.711111 58 8 0.708072 190 8 0.879676 234 12 0.92798 317 12 0.85814 330 13 0.861264 268 10 0.87599 260 13 0.81703 285 10 0.887485 0.729011 0.86149 0.909932 0.949020 0.845188 0.875605 0.883349 0.841976 0.910504 0.894195 0.871501 0.906817 0.91848 0.880549 0.898084 0.975558 0.866930 0.932162 0.87306 0.85856 0.884560 0.865025 0.870175 0.894811 0.867837 0.903900 0.93190 0.814694 0.867447 0.886854 0.862541 0.790274 0.759032 0.889221 0.791634 0.819668 0.8724897 0.937684 0.908273 0.877719 0.904402 0.86712 4 0.89116 0.86201 0.0147437 10 0.81854 0.83230 -0.0137551 0.169427 0.7273803 insignificant 1 1 insignificant 0.197685 0.6930387 insignificant 1 1 insignificant 0.01124510 0.62052 insignificant 1 insignificant 0.89129 0.8346457 0.0478731 10 0.84304 0.799366 0.04367908 2.9253e-04 9.8059e-01 weaklyHypermeth 9.7510e-03 1.00000000 weaklyHypermeth 5.0800e-03 0.997258 weaklyHypermeth 1.8815e-01 1 insignificant 0.069327 5.4848e-02 insignificant 1.0000e+00 insignificant 0.89116 0.896575 -0.0178393 10 0.81854 0.88557 -0.0670252 9.8374e-01 6.3567e-02 insignificant 1.0000e+00 1.000000 insignificant 6.0967e-01 0.5669534 insignificant 1.0000e+00 1.00000 insignificant -1.3260e-02 0.56754582 insignificant 1.00000 insignificant 0.86267 0.8346457 0.035378 10 0.85786 0.799366 0.0584923 1.3986e-02 8.7043e-01 weaklyHypermeth 3.6259e-01 1.0000000 insignificant 2.5369e-02 0.977354 weaklyHypermeth 7.9278e-01 1 insignificant 0.058082 1.0889e-01 insignificant 1.0000e+00 insignificant 0.86201 0.896575 -0.0354646 10 0.83230 0.88557 -0.0532701 9.8744e-01 0.00162366 weaklyHypometh 1.0000e+00 0.32473 insignificant 7.8521e-01 0.0443613 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.02450529 3.5292e-01 insignificant 1.000000 insignificant 0.8346457 0.896433 -0.0677477 10 0.799366 0.87676 -0.077398 9.9897e-01 2.0193e-03 weaklyHypometh 1.000000 1.0628e-01 insignificant 0.9644092 1.9554e-02 weaklyHypometh 1 9.3115e-01 insignificant -0.082588 3.4853e-02 weaklyHypometh 1.0000000 insignificant chr7 76470132 76471132 78373 PMS2L11 ENSG00000186704 0.831902 201 7 0.95769 163 6 0.94415 127 6 0.98369 185 8 0.97840 105 6 0.79996 258 8 0.86763 86 4 0.908391 134 9 0.88016 76 6 0.96599 70 6 0.92109 327 8 0.98077 42 2 0.971820 111 6 0.973810 49 3 0.90793 77 3 0.944444 51 2 0.77500 30 2 0.88087 307 5 0.868637 263 6 0.970135 163 7 0.84345 101 7 0.989899 40 2 0.92342 174 10 0.766317 73 7 0.934137 167 8 0.96700 183 8 0.84801 96 7 0.99405 48 2 0.96682 187 6 0.968554 242 8 0.85773 278 8 0.97404 236 9 0.636804 185 8 0.837932 216 9 0.80556 128 6 0.900000 12 0 0.682579 115 6 0.833739 316 9 0.88160 98 7 0.94339 188 8 0.979310 152 5 0.98986 90 3 0.80634 133 7 0.908845 0.899891 0.89905 0.962550 0.937662 0.954385 0.857851 0.887257 0.918611 0.870566 0.929976 0.952229 0.953072 0.94126 0.942780 0.806366 0.812195 0.892586 0.935512 0.96432 0.93429 0.984330 0.898180 0.963517 0.891393 0.957300 0.853726 0.96696 0.956814 0.957248 0.919336 0.962440 0.632067 0.703145 0.486577 0.669780 0.726290 0.8640237 0.966326 0.913708 0.940920 0.955922 0.84534 1 0.93161 0.94457 -0.0125219 6 0.89947 0.91517 -0.0157085 0.116471 0.0508793 insignificant 1 1 insignificant 0.038345 0.0567304 inconclusive 1 1 insignificant -0.00382901 0.88156 insignificant 1 insignificant 0.93161 0.8016529 0.1516431 6 0.89947 0.775341 0.12412541 1.1398e-06 9.7089e-01 weaklyHypermeth 4.5591e-05 1.00000000 weaklyHypermeth 1.8738e-04 0.996404 weaklyHypermeth 8.9230e-03 1 weaklyHypermeth 0.132855 2.1780e-02 weaklyHypermeth 8.7120e-01 insignificant 0.93161 0.937973 -0.0037233 5 0.89947 0.89451 0.0049583 2.1798e-01 2.9527e-01 insignificant 1.0000e+00 1.000000 insignificant 7.2943e-01 0.5122222 insignificant 1.0000e+00 1.00000 insignificant -4.4774e-03 0.90791519 insignificant 1.00000 insignificant 0.94356 0.7983539 0.138902 7 0.84598 0.646117 0.1998616 3.9096e-05 9.1732e-01 weaklyHypermeth 1.4480e-03 1.0000000 weaklyHypermeth 1.8419e-03 0.977386 weaklyHypermeth 8.0084e-02 1 weaklyHypermeth 0.136684 1.9333e-02 weaklyHypermeth 8.7586e-01 insignificant 0.94457 0.937973 0.0094375 5 0.91517 0.89451 0.0206668 7.1844e-01 0.64805950 insignificant 1.0000e+00 1.00000 insignificant 8.6085e-01 0.5474151 insignificant 1.0000e+00 1.00000 insignificant -0.00064839 9.8755e-01 insignificant 1.000000 insignificant 0.8016529 0.937973 -0.1615317 5 0.775341 0.89451 -0.119167 9.2230e-01 6.5379e-03 weaklyHypometh 1.000000 2.4214e-01 insignificant 0.9956285 2.1660e-02 weaklyHypometh 1 9.7381e-01 insignificant -0.137332 3.0769e-02 weaklyHypometh 1.0000000 insignificant chr7 81754322 81755322 78601 HGF ENSG00000019991 0.860957 256 5 0.81386 172 5 0.76761 67 4 0.91145 163 5 0.87556 43 4 0.80703 425 5 0.77373 76 4 0.867532 165 5 0.92339 89 5 0.91422 95 5 0.91011 202 5 0.77827 25 3 0.860702 146 5 NA 0 0 0.83742 91 5 0.867227 36 3 0.82254 42 5 0.80685 181 5 0.838098 168 5 0.896301 398 5 0.81431 283 5 0.891345 157 4 0.84627 138 5 0.832222 137 5 0.781055 84 3 0.89682 213 5 0.79821 288 5 0.81852 116 5 0.80605 173 5 0.831951 230 5 0.85203 206 5 0.82281 412 5 0.855174 241 5 0.785297 139 5 0.78522 190 5 0.718040 60 5 0.862505 162 4 0.766909 186 5 0.90914 515 5 0.88809 264 5 0.852047 142 5 0.89646 244 5 0.94625 178 5 0.867196 0.835567 0.76088 0.921031 0.882876 0.825173 0.765267 0.869442 0.931029 0.917287 0.917442 0.800757 0.884051 NA 0.847935 0.859318 0.818543 0.821553 0.841749 0.90508 0.83335 0.896914 0.868347 0.856088 0.766888 0.904733 0.802921 0.84515 0.839692 0.870747 0.854092 0.845454 0.861190 0.774015 0.807828 0.742865 0.863340 0.7837768 0.906742 0.899267 0.871758 0.909376 0.94814 4 0.88239 0.88880 0.0058667 5 0.84530 0.83242 0.0128783 0.209863 0.7485485 insignificant 1 1 insignificant 0.085250 0.7781604 insignificant 1 1 insignificant 0.01646593 0.28718 lowCoverage 1 lowCoverage 0.88239 0.8619632 0.0317830 5 0.84530 0.802562 0.04273281 2.7041e-02 9.8492e-01 weaklyHypermeth 6.5955e-01 1.00000000 insignificant 2.1831e-02 0.991003 weaklyHypermeth 6.4209e-01 1 insignificant 0.053573 6.6744e-02 lowCoverage 1.0000e+00 lowCoverage 0.88239 0.932241 -0.0422138 5 0.84530 0.90292 -0.0576252 9.9986e-01 4.4881e-03 weaklyHypometh 1.0000e+00 0.561014 insignificant 9.8884e-01 0.0249141 weaklyHypometh 1.0000e+00 1.00000 insignificant -4.9301e-02 0.02914075 lowCoverage 1.00000 lowCoverage 0.88880 0.8619632 0.020854 5 0.83242 0.802562 0.0298545 4.5292e-02 7.9178e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 5.4677e-02 0.862419 insignificant 1.0000e+00 1 insignificant 0.037107 1.7418e-01 lowCoverage 1.0000e+00 lowCoverage 0.88880 0.932241 -0.0433704 5 0.83242 0.90292 -0.0705035 9.9914e-01 0.00008374 weaklyHypometh 1.0000e+00 0.04187 weaklyHypometh 9.9965e-01 0.0019645 weaklyHypometh 1.0000e+00 0.98226 insignificant -0.06576675 7.4829e-03 lowCoverage 1.000000 lowCoverage 0.8619632 0.932241 -0.0670183 5 0.802562 0.90292 -0.100358 9.9994e-01 5.6280e-04 weaklyHypometh 1.000000 3.7520e-02 weaklyHypometh 0.9999269 2.4853e-04 weaklyHypometh 1 2.7614e-02 weaklyHypometh -0.102874 4.7923e-03 lowCoverage 0.5990372 lowCoverage chr7 87651874 87652874 78877 ENSG00000222010,ENSG00000222016,ENSG00000222045 0.845897 296 5 0.75770 118 5 0.60476 68 5 0.85355 209 5 0.90000 22 3 0.89763 330 5 0.92667 55 5 0.922127 120 5 0.69953 46 5 0.88930 111 5 0.87773 165 5 0.74286 25 3 0.746576 186 5 0.933333 42 5 0.80602 129 5 0.944444 18 3 0.54643 26 3 0.63476 210 5 0.872698 61 5 0.884229 165 5 1.00000 1 0 0.718268 73 5 0.90529 112 5 0.904762 28 4 0.811429 54 5 0.81191 144 5 0.77862 54 5 0.75238 33 5 0.80773 126 5 0.831504 151 5 0.90031 133 5 0.87097 146 5 0.705200 136 5 0.617768 68 5 NA 0 0 0.275000 22 2 0.468656 71 5 0.344381 219 5 0.83716 241 5 0.82358 146 5 0.926231 230 5 0.82689 158 5 0.76906 244 5 0.822057 0.750298 0.61602 0.837000 0.858255 0.890091 0.937539 0.902274 0.786574 0.842621 0.854965 0.634179 0.764705 0.90550 0.818242 0.927822 0.679573 0.619273 0.865361 0.88499 NA 0.767340 0.927906 0.898531 0.765198 0.826879 0.755591 0.64753 0.874151 0.816545 0.872745 0.839548 0.668195 0.502973 NA 0.389019 0.479222 0.2969756 0.824058 0.780733 0.927971 0.855522 0.74310 3 0.82681 0.83318 -0.0102052 5 0.82667 0.83650 -0.0098261 0.873602 0.4039083 insignificant 1 1 insignificant 0.647385 0.7001668 insignificant 1 1 insignificant -0.02678429 0.44694 lowCoverage 1 lowCoverage 0.82681 0.4631783 0.3588996 5 0.82667 0.489013 0.33766147 1.5496e-18 1.0000e+00 hypermethylated 1.9371e-16 1.00000000 hypermethylated 4.5736e-07 0.999999 hypermethylated 5.7170e-05 1 hypermethylated 0.332112 1.1779e-02 lowCoverage 6.6133e-01 lowCoverage 0.82681 0.838077 -0.0071601 5 0.82667 0.83427 -0.0075964 7.4774e-01 4.0007e-01 insignificant 1.0000e+00 1.000000 insignificant 6.7382e-01 0.6228847 insignificant 1.0000e+00 1.00000 insignificant -2.2271e-02 0.55247552 lowCoverage 1.00000 lowCoverage 0.83318 0.4631783 0.367822 5 0.83650 0.489013 0.3474876 1.7382e-14 1.0000e+00 hypermethylated 2.4832e-12 1.0000000 hypermethylated 6.0221e-07 0.999998 hypermethylated 1.0037e-04 1 hypermethylated 0.358896 9.2492e-03 lowCoverage 5.4407e-01 lowCoverage 0.83318 0.838077 0.0051661 5 0.83650 0.83427 0.0022297 5.0954e-01 0.66157965 insignificant 1.0000e+00 1.00000 insignificant 6.8282e-01 0.6398962 insignificant 1.0000e+00 1.00000 insignificant 0.00451367 8.9687e-01 lowCoverage 1.000000 lowCoverage 0.4631783 0.838077 -0.3632717 5 0.489013 0.83427 -0.345258 1.0000e+00 3.1253e-08 hypomethylated 1.000000 5.2089e-06 hypomethylated 0.9999995 1.7982e-05 hypomethylated 1 4.4955e-03 hypomethylated -0.354382 9.4392e-03 lowCoverage 0.8304289 lowCoverage chr7 92395590 92396590 79188 CDK6 ENSG00000105810 0.83814 465 10 0.84865 230 10 0.695561 174 9 0.724160 208 10 0.734762 127 10 0.86670 359 10 0.814733 148 11 0.841110 185 10 0.810607 135 10 0.89121 131 9 0.85732 298 10 0.89625 85 8 0.844807 135 10 0.46667 25 2 0.768190 200 10 0.725932 74 8 0.821734 67 8 0.857273 291 11 0.863926 227 9 0.73161 305 9 0.76558 56 7 0.84291 97 8 0.69449 284 10 0.56949 76 4 0.678571 60 8 0.809407 169 11 0.796439 91 10 0.63548 55 5 0.764558 158 9 0.74961 243 11 0.818506 198 10 0.78884 425 10 0.619219 128 10 0.8017316 118 9 0.803315 204 10 0.85726 104 8 0.712295 90 10 0.6972558 222 10 0.81870 529 10 0.90483 500 10 0.87809 289 10 0.85543 364 10 0.89450 532 10 0.830241 0.82850 0.82273 0.87560 0.834566 0.82601 0.85072 0.8377149 0.811150 0.87785 0.85769 0.874368 0.842871 0.85541 0.861306 0.698475 0.91104 0.888823 0.85753 0.82247 0.85582 0.82985 0.81978 0.78412 0.813822 0.838082 0.786699 0.815709 0.800526 0.841785 0.838520 0.863329 0.6825667 0.78139388 0.80774926 0.841320 0.7670754 0.8572852 0.882216 0.90218 0.92003 0.89910 0.88352 7 0.826436 0.82584 0.00468727 10 0.817058 0.65342 0.1636394 0.614848 0.7514831 insignificant 1 1 insignificant 0.0422624 0.976610 weaklyHypermeth 1 1 insignificant 0.0521445 0.1186557 insignificant 1 insignificant 0.826312 0.7979215 0.0336343 10 0.807032 0.641057 0.165975 2.7228e-02 9.5325e-01 weaklyHypermeth 8.0083e-01 1.0000e+00 insignificant 6.8289e-02 9.6494e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0464533 2.9650e-01 insignificant 1.0000e+00 insignificant 0.826256 0.88618 -0.0542000 10 0.786568 0.85367 -0.0671035 9.9999e-01 6.7667e-05 weaklyHypometh 1.0000e+00 0.0225555 weaklyHypometh 9.9996e-01 0.00027535 weaklyHypometh 1.00000000 0.27535 insignificant -0.0753416 0.0109397 weaklyHypometh 1.0000 insignificant 0.82584 0.7988439 0.030447 10 0.65342 0.686847 -0.033428 7.9992e-02 8.9915e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6129e-01 6.9332e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00569124 8.9720e-01 insignificant 1.0000e+00 insignificant 0.82670 0.886179 -0.0561408 10 0.76232 0.85367 -0.0913495 9.9995e-01 8.0458e-05 weaklyHypometh 1.0000e+00 0.080458 weaklyHypometh 9.9999e-01 3.1999e-05 weaklyHypometh 1.0000000 0.031999 weaklyHypometh -0.1274861 0.00041805 weaklyHypometh 0.41805 insignificant 0.8004640 0.886179 -0.0860866 10 0.759654 0.85367 -0.094017 9.9993e-01 2.6395e-03 weaklyHypometh 1.0000e+00 1.3892e-01 insignificant 9.9975e-01 4.9058e-03 weaklyHypometh 1.00000000 5.4542e-01 insignificant -0.121795 1.7453e-02 weaklyHypometh 1.0000000 insignificant chr7 98714612 98715612 79682 ENSG00000002079 0.91935 61 3 0.82324 131 7 0.784554 103 5 0.981868 73 3 0.891667 37 4 0.94348 112 5 0.815747 48 4 0.883333 49 4 0.903571 32 4 0.90000 12 2 0.85772 70 4 0.50000 2 0 0.750000 16 0 0.68750 10 0 0.500000 12 2 1.000000 6 0 0.500000 15 1 0.817734 42 2 0.883100 42 3 0.87460 52 5 0.97222 22 2 1.00000 13 2 0.95833 67 5 0.93750 12 0 0.605759 87 4 0.817944 131 8 0.889773 39 2 0.63333 18 2 1.000000 16 2 0.87222 150 8 0.936175 134 8 0.74113 96 5 0.901020 95 7 0.9097222 68 4 0.914286 132 4 0.79629 90 5 0.869444 40 4 0.7887293 107 8 0.97318 63 5 0.91042 73 5 0.85257 70 4 0.97895 24 1 0.84821 64 3 0.866667 0.82738 0.82000 0.98462 0.891111 0.94261 0.80974 0.8666667 0.902857 0.88000 0.85618 0.536382 0.950000 0.75000 0.600000 0.936382 0.73638 0.962821 0.85128 0.74282 0.95556 1.00000 0.98333 0.95000 0.904688 0.896581 0.891818 0.706667 1.000000 0.975000 0.953453 0.969231 1.0000000 0.90555556 0.85333333 0.705455 0.8555556 0.8620426 0.977778 0.98333 0.79000 0.98333 1.00000 0 0.860390 0.92031 -0.06364665 5 0.759565 0.93290 -0.1733305 0.999671 0.0021776 weaklyHypometh 1 1 insignificant 0.9401394 0.033298 weaklyHypometh 1 1 insignificant -0.0528261 0.3214711 lowCoverage 1 lowCoverage 0.861322 0.8740602 -0.0017310 5 0.854511 0.839143 0.015368 1.6846e-01 3.4358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5427e-01 6.4879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0523754 2.1838e-01 lowCoverage 1.0000e+00 lowCoverage 0.861322 0.93197 -0.0727416 3 0.854511 0.90345 -0.0489365 9.8641e-01 1.9942e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8815e-01 0.02247205 lowCoverage 1.00000000 1.00000 lowCoverage -0.1017935 0.0345666 lowCoverage 1.0000 lowCoverage 0.92021 0.8740602 0.065960 6 0.92451 0.839143 0.085365 7.8466e-04 9.9368e-01 weaklyHypermeth 3.2694e-02 1.0000e+00 weaklyHypermeth 5.0581e-02 9.9363e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00045073 9.9228e-01 lowCoverage 1.0000e+00 lowCoverage 0.92021 0.931973 -0.0106928 3 0.92451 0.90345 0.0210604 4.6871e-01 5.7503e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.6202e-01 4.1076e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.0489673 0.32907754 lowCoverage 1.00000 lowCoverage 0.8740602 0.931973 -0.0449995 3 0.839143 0.90345 -0.064304 9.6485e-01 8.0749e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9501e-01 9.1598e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.049418 2.1184e-01 lowCoverage 1.0000000 lowCoverage chr7 99528686 99529686 79696 MIR106B,MIR25,MIR93 ENSG00000207547,ENSG00000207757,ENSG00000208036 0.91497 519 9 0.85216 393 9 0.794942 339 9 0.902607 562 9 0.941238 151 8 0.84355 663 9 0.937825 195 6 0.915068 355 9 0.936263 300 8 0.94892 249 9 0.92455 463 9 0.85425 136 6 0.886754 289 9 0.90003 246 6 0.908120 335 9 0.960317 118 6 0.972222 18 1 0.758123 658 9 0.943713 400 9 0.93164 475 9 0.95193 135 9 0.79583 177 9 0.92174 327 9 0.90716 184 9 0.881818 155 9 0.930412 468 9 0.888109 288 9 0.71036 131 7 0.895376 353 9 0.93164 404 9 0.923455 407 9 0.92950 567 9 0.534067 313 9 0.5996730 244 9 0.757823 232 5 0.63822 83 9 0.527708 320 9 0.5588620 560 9 0.84491 343 9 0.82002 536 9 0.84712 476 9 0.75036 330 9 0.84078 429 9 0.911030 0.84081 0.78222 0.91522 0.920626 0.94498 0.91160 0.9057712 0.922740 0.93385 0.91364 0.829374 0.891633 0.88873 0.919282 0.957903 0.92398 0.805732 0.92987 0.91756 0.93928 0.72646 0.91329 0.93770 0.881340 0.923007 0.901682 0.899013 0.901809 0.941122 0.906058 0.934370 0.4593126 0.43246053 0.76080846 0.637233 0.4850971 0.4424289 0.847763 0.77457 0.81583 0.74274 0.84401 6 0.896838 0.91073 -0.01549119 9 0.858736 0.78093 0.0778089 0.796535 0.0976680 insignificant 1 1 insignificant 0.7135354 0.481380 insignificant 1 1 insignificant 0.0124197 0.6027947 insignificant 1 insignificant 0.896853 0.5599315 0.3370194 9 0.870508 0.597113 0.273395 2.1840e-41 9.9994e-01 hypermethylated 5.4601e-39 1.0000e+00 hypermethylated 1.5240e-09 9.9997e-01 hypermethylated 3.8100e-07 1.0000e+00 hypermethylated 0.2986370 1.6571e-04 hypermethylated 1.6571e-02 hypermethylated 0.897070 0.81410 0.0833706 9 0.901418 0.82732 0.0740969 7.2512e-09 9.9284e-01 weaklyHypermeth 1.8128e-06 1.0000000 weaklyHypermeth 2.3928e-07 0.99476429 weaklyHypermeth 0.00011964 1.00000 weaklyHypermeth 0.0807251 0.0061064 weaklyHypermeth 0.8868 insignificant 0.91073 0.5596802 0.362847 9 0.78093 0.560487 0.220440 2.0597e-30 1.0000e+00 hypermethylated 5.1493e-28 1.0000e+00 hypermethylated 8.2516e-08 9.9994e-01 hypermethylated 1.6503e-05 1.00000000 hypermethylated 0.28621726 9.0296e-05 hypermethylated 1.0033e-02 hypermethylated 0.91172 0.814096 0.1019682 9 0.91743 0.82732 0.0901082 4.7799e-09 9.9995e-01 weaklyHypermeth 1.5933e-06 1.000000 weaklyHypermeth 9.8281e-07 9.9973e-01 weaklyHypermeth 0.0009828 1.000000 weaklyHypermeth 0.0683053 0.02549120 weaklyHypermeth 1.00000 insignificant 0.5600686 0.814096 -0.2544253 9 0.573929 0.82732 -0.253392 9.9999e-01 3.0603e-12 hypomethylated 1.0000e+00 9.6330e-10 hypomethylated 9.9998e-01 4.0180e-04 hypomethylated 1.00000000 6.6966e-02 hypomethylated -0.217912 7.8901e-04 hypomethylated 0.0877747 hypomethylated chr7 99529100 99530100 79697 MIR106B,MIR25,MIR93 ENSG00000207547,ENSG00000207757,ENSG00000208036 0.92134 559 11 0.86605 492 11 0.820861 387 11 0.915986 605 11 0.912666 174 10 0.86458 726 11 0.924228 238 8 0.916654 408 11 0.937071 350 10 0.94728 297 11 0.91229 533 11 0.85802 150 8 0.895981 321 11 0.92502 275 8 0.912731 409 11 0.906926 124 6 0.777778 19 1 0.792453 714 11 0.947986 522 11 0.93053 518 11 0.94069 162 11 0.82468 221 11 0.92709 368 11 0.88435 225 11 0.878512 177 11 0.926463 577 11 0.888251 320 11 0.73488 157 9 0.905149 449 11 0.93667 573 11 0.936055 542 11 0.93313 626 11 0.582418 423 11 0.6376984 289 11 0.698613 350 7 0.70400 85 9 0.579930 395 11 0.6304109 680 11 0.86401 382 11 0.84404 599 11 0.87492 494 11 0.77436 364 11 0.86973 458 11 0.916938 0.85412 0.80576 0.92447 0.899926 0.94873 0.90424 0.9085029 0.925464 0.93452 0.90508 0.836291 0.898587 0.90560 0.921435 0.913748 0.85465 0.829743 0.93553 0.91869 0.93183 0.76104 0.91903 0.91232 0.878656 0.920837 0.899743 0.890860 0.908984 0.943879 0.919202 0.936652 0.5109652 0.49528549 0.71995953 0.692233 0.5390624 0.5197442 0.863264 0.80149 0.84375 0.76391 0.86766 8 0.900895 0.91494 -0.01385889 11 0.869758 0.80447 0.0652858 0.824442 0.1181244 insignificant 1 1 insignificant 0.6781019 0.539034 insignificant 1 1 insignificant 0.0013281 0.9492306 insignificant 1 insignificant 0.900908 0.6044104 0.3118760 11 0.879061 0.622448 0.256613 1.8679e-42 9.9980e-01 hypermethylated 6.2264e-40 1.0000e+00 hypermethylated 2.4803e-09 9.9986e-01 hypermethylated 4.9605e-07 1.0000e+00 hypermethylated 0.2554766 8.6917e-06 hypermethylated 1.0865e-03 hypermethylated 0.901100 0.82499 0.0730614 11 0.906684 0.84979 0.0568949 6.3596e-08 9.6135e-01 weaklyHypermeth 1.2719e-05 1.0000000 weaklyHypermeth 2.4186e-06 0.88637865 weaklyHypermeth 0.00060465 1.00000 weaklyHypermeth 0.0489101 0.0566995 insignificant 1.0000 insignificant 0.91494 0.6042323 0.323480 11 0.80447 0.593406 0.211067 6.6006e-31 1.0000e+00 hypermethylated 2.2002e-28 1.0000e+00 hypermethylated 6.6245e-08 9.9780e-01 hypermethylated 1.6503e-05 1.00000000 hypermethylated 0.25414850 1.7140e-06 hypermethylated 4.2850e-04 hypermethylated 0.91576 0.824989 0.0890067 11 0.92044 0.84979 0.0706480 4.6766e-08 9.9695e-01 weaklyHypermeth 7.7943e-06 1.000000 weaklyHypermeth 9.5999e-06 9.5212e-01 weaklyHypermeth 0.0032000 1.000000 weaklyHypermeth 0.0475820 0.08792536 insignificant 1.00000 insignificant 0.6045987 0.824989 -0.2460778 11 0.610388 0.84979 -0.239401 9.9981e-01 3.8532e-12 hypomethylated 1.0000e+00 9.6330e-10 hypomethylated 9.9999e-01 2.8322e-04 hypomethylated 1.00000000 5.6643e-02 hypomethylated -0.206567 5.2951e-05 hypomethylated 0.0134861 hypomethylated chr7 99705293 99706293 79699 ENSG00000222482 0.56250 65 4 0.38438 98 6 0.400833 75 5 0.480843 53 5 0.320833 33 4 0.47620 125 5 0.505556 44 6 0.302741 98 5 0.457362 75 5 0.51786 61 5 0.58607 148 6 0.36436 40 4 0.291443 99 4 0.00000 5 1 0.445455 58 5 0.260714 21 2 0.321970 44 4 0.651082 43 4 0.604167 50 4 0.69010 148 4 0.56697 54 6 0.27302 53 5 0.45971 83 4 0.19821 56 6 0.544746 76 6 0.355042 103 6 0.476768 81 6 0.34722 13 0 0.358880 61 4 0.36376 136 6 0.478735 113 6 0.62298 125 5 0.626233 78 6 0.6649471 68 5 0.732143 192 6 0.45175 34 2 0.700000 44 6 0.6557179 104 6 0.14916 60 5 0.28251 107 5 0.35333 54 5 0.38228 62 4 0.41296 45 5 0.692402 0.55382 0.52593 0.70966 0.622222 0.58747 0.64510 0.4393342 0.593120 0.65161 0.76073 0.394482 0.421827 NA 0.548128 0.411765 0.31581 0.543630 0.59722 0.68438 0.80596 0.30849 0.68640 0.24615 0.791667 0.510849 0.717172 0.200980 0.443623 0.543884 0.574152 0.694774 0.8552060 0.96708683 1.00000000 0.578431 1.0000000 0.8520690 0.215449 0.40846 0.42255 0.36434 0.60719 2 0.516293 0.47484 0.01147096 5 0.441854 0.49047 -0.0486116 0.240523 0.8244134 insignificant 1 1 insignificant 0.7121160 0.751620 insignificant 1 1 insignificant 0.0107198 0.8350292 lowCoverage 1 lowCoverage 0.516316 0.7923077 -0.2890234 5 0.432163 0.668372 -0.236209 9.9985e-01 2.3532e-15 hypomethylated 1.0000e+00 5.8831e-13 hypomethylated 1.0000e+00 2.0719e-09 hypomethylated 1.0000e+00 2.0719e-06 hypomethylated -0.2072428 1.8254e-03 lowCoverage 1.0991e-01 lowCoverage 0.516316 0.36280 0.1791374 5 0.432163 0.27314 0.1590192 6.7521e-07 1.0000e+00 weaklyHypermeth 1.1254e-04 1.0000000 weaklyHypermeth 1.8628e-04 0.99999185 weaklyHypermeth 0.03104584 1.00000 weaklyHypermeth 0.1151734 0.0818805 lowCoverage 1.0000 lowCoverage 0.47429 0.7923077 -0.292520 5 0.40554 0.668372 -0.262829 1.0000e+00 1.6280e-12 hypomethylated 1.0000e+00 8.1401e-10 hypomethylated 1.0000e+00 3.7167e-07 hypomethylated 1.0000e+00 0.00037167 hypomethylated -0.21796262 1.5292e-03 weaklyHypometh 9.5576e-02 weaklyHypometh 0.47429 0.362805 0.1660267 5 0.40554 0.27314 0.1323994 4.2709e-04 9.9973e-01 weaklyHypermeth 4.2709e-02 1.000000 weaklyHypermeth 5.0262e-03 9.9989e-01 weaklyHypermeth 0.4188489 1.000000 insignificant 0.1044535 0.11224206 lowCoverage 1.00000 lowCoverage 0.7923077 0.362805 0.4839109 5 0.668372 0.27314 0.395228 3.0546e-17 1.0000e+00 hypermethylated 3.0546e-14 1.0000e+00 hypermethylated 2.6703e-07 1.0000e+00 hypermethylated 0.00026703 1.0000e+00 hypermethylated 0.322416 6.9221e-04 lowCoverage 0.0877747 lowCoverage chr7 99902873 99903873 79701 C7orf61 ENSG00000185955 0.66629 178 10 0.69964 474 10 0.884821 422 11 0.768930 141 5 0.867510 344 10 0.88747 314 8 0.848262 556 11 0.725799 349 9 0.750148 313 10 0.80464 164 10 0.80143 531 11 0.83018 262 9 0.801733 292 10 0.88998 103 5 0.831001 292 10 0.788688 347 10 0.751284 220 6 0.681770 122 8 0.918158 506 10 0.91786 240 10 0.68940 134 9 0.92188 34 4 0.72881 280 11 0.81785 210 8 0.783730 64 5 0.888390 556 10 0.728338 197 8 0.76386 175 9 0.815026 361 9 0.83319 593 10 0.823436 647 10 0.89423 275 10 0.564246 375 11 0.6222226 276 9 0.798781 595 9 0.63148 30 3 0.499214 282 11 0.6538713 430 11 0.72605 213 9 0.84454 196 8 0.77172 78 6 0.74818 121 8 0.66875 82 5 0.922830 0.83471 0.85615 0.87217 0.947564 0.93500 0.89793 0.8916634 0.885720 0.88342 0.92025 0.909177 0.955054 0.94262 0.943941 0.955861 0.73509 0.878253 0.93053 0.92230 0.82302 0.96329 0.89916 0.89069 0.921327 0.916376 0.870170 0.921109 0.907467 0.928840 0.933469 0.904309 0.6760734 0.66476519 0.82576340 0.786703 0.7155769 0.8723681 0.859838 0.90474 0.90521 0.85558 0.88748 5 0.893952 0.90045 -0.00123583 9 0.711996 0.70133 0.0106696 0.894288 0.9073281 insignificant 1 1 insignificant 0.9291076 0.526760 insignificant 1 1 insignificant -0.0015643 0.9542391 insignificant 1 insignificant 0.894549 0.7681452 0.1266006 9 0.745329 0.589776 0.155553 1.7102e-17 8.2300e-01 weaklyHypermeth 2.1377e-15 1.0000e+00 weaklyHypermeth 5.6335e-06 9.3713e-01 weaklyHypermeth 5.6335e-04 1.0000e+00 weaklyHypermeth 0.1774768 5.4989e-03 weaklyHypermeth 2.3908e-01 insignificant 0.894097 0.87101 0.0150191 6 0.762853 0.69878 0.0640754 2.3525e-02 9.6367e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 7.0537e-01 0.65995382 insignificant 1.00000000 1.00000 insignificant 0.0539331 0.1507108 insignificant 1.0000 insignificant 0.90096 0.7684157 0.116590 9 0.75142 0.596188 0.155233 2.3804e-10 9.7780e-01 weaklyHypermeth 2.1640e-08 1.0000e+00 weaklyHypermeth 1.2826e-04 9.9910e-01 weaklyHypermeth 9.8663e-03 1.00000000 weaklyHypermeth 0.17904117 4.9946e-03 weaklyHypermeth 2.3784e-01 insignificant 0.90071 0.871014 0.0137718 6 0.75142 0.69878 0.0526437 7.9070e-02 9.7911e-01 insignificant 1.0000e+00 1.000000 insignificant 5.9056e-01 9.0348e-01 insignificant 1.0000000 1.000000 insignificant 0.0554974 0.15480590 insignificant 1.00000 insignificant 0.7695806 0.886431 -0.1014135 6 0.642049 0.75253 -0.110480 9.6199e-01 4.2445e-04 weaklyHypometh 1.0000e+00 3.5371e-02 weaklyHypometh 9.9459e-01 7.3537e-03 weaklyHypometh 1.00000000 6.6852e-01 insignificant -0.123544 3.7227e-02 weaklyHypometh 1.0000000 insignificant chr7 99913211 99914211 79705 C7orf61 ENSG00000185955 0.37581 446 15 0.28906 489 15 0.386610 587 15 0.350486 485 12 0.462478 553 15 0.44166 810 16 0.509015 741 15 0.353350 586 15 0.361970 558 15 0.42584 538 15 0.44019 641 15 0.20237 708 15 0.297695 442 15 0.42020 199 8 0.305229 597 15 0.231894 567 15 0.170628 1472 11 0.187102 692 7 0.087590 681 15 0.44761 387 14 0.28070 169 12 0.26108 202 8 0.42031 349 15 0.24070 278 15 0.267573 719 8 0.520453 653 15 0.339619 333 13 0.49208 199 13 0.438724 621 15 0.48286 559 15 0.274531 657 16 0.31688 440 15 0.015641 490 15 0.0028986 584 12 0.035714 526 13 0.00000 486 6 0.068057 290 14 0.0052309 599 16 0.30445 432 13 0.22132 404 12 0.35925 453 9 0.20269 729 7 0.25284 287 7 0.310173 0.25036 0.30801 0.28047 0.348710 0.33823 0.43797 0.3095847 0.369484 0.35262 0.43044 0.223403 0.258222 0.32243 0.257093 0.195061 0.18358 0.186535 0.11605 0.42752 0.33275 0.12613 0.31945 0.17591 0.221885 0.391099 0.268788 0.504009 0.360672 0.422682 0.254837 0.337975 0.0058728 0.00083466 0.00029502 0.000000 0.0037489 0.0076268 0.231856 0.14669 0.21377 0.14093 0.10457 6 0.272936 0.29683 -0.02739513 15 0.311963 0.35653 -0.0445660 0.999855 0.3358378 insignificant 1 1 insignificant 0.9878955 0.968997 insignificant 1 1 insignificant -0.0239541 0.5455768 insignificant 1 insignificant 0.272907 0.0050522 0.2646866 15 0.324356 0.071417 0.252938 4.3100e-53 1.0000e+00 hypermethylated 2.1550e-50 1.0000e+00 hypermethylated 2.0094e-27 1.0000e+00 hypermethylated 2.0094e-24 1.0000e+00 hypermethylated 0.3160824 4.1466e-11 hypermethylated 4.1466e-08 hypermethylated 0.273063 0.08941 0.0767021 7 0.385778 0.36334 0.0224335 6.8208e-06 9.9988e-01 weaklyHypermeth 8.5260e-04 1.0000000 weaklyHypermeth 2.2957e-05 0.99999180 weaklyHypermeth 0.00459141 1.00000 weaklyHypermeth 0.0692288 0.0967843 insignificant 1.0000 insignificant 0.29735 0.0050471 0.290979 15 0.43061 0.064925 0.365683 8.4042e-37 1.0000e+00 hypermethylated 8.4042e-34 1.0000e+00 hypermethylated 1.8738e-19 1.0000e+00 hypermethylated 1.8738e-16 1.00000000 hypermethylated 0.34003652 5.0904e-08 hypermethylated 5.0904e-05 hypermethylated 0.29708 0.088976 0.1001437 7 0.37379 0.31789 0.0558994 1.3288e-05 1.0000e+00 weaklyHypermeth 1.8982e-03 1.000000 weaklyHypermeth 8.3269e-04 1.0000e+00 weaklyHypermeth 0.1189554 1.000000 insignificant 0.0931829 0.04289825 weaklyHypermeth 1.00000 insignificant 0.0050539 0.088696 -0.1173768 8 0.075176 0.34177 -0.266591 1.0000e+00 6.6422e-19 weaklyHypometh 1.0000e+00 3.3211e-16 weaklyHypometh 1.0000e+00 3.4242e-09 weaklyHypometh 1.00000000 3.4242e-06 weaklyHypometh -0.246854 4.1413e-04 hypomethylated 0.0690217 hypomethylated chr7 100271116 100272116 79711 EPHB4 ENSG00000196411 0.31818 130 6 0.31987 184 7 0.222882 194 8 0.193768 115 3 0.198770 160 7 0.30379 170 7 0.263568 187 8 0.221131 130 7 0.212989 160 6 0.34137 139 5 0.27805 250 8 0.22338 162 7 0.236279 160 7 0.55556 38 3 0.254128 184 7 0.135490 186 5 0.073593 105 6 0.220820 142 3 0.194643 136 7 0.25069 130 7 0.30685 76 7 0.39015 47 1 0.34876 131 7 0.24297 72 7 0.220668 69 3 0.250085 223 8 0.186421 89 5 0.21474 87 6 0.257938 150 7 0.23986 183 8 0.263946 167 7 0.31170 185 7 0.370920 163 8 0.4179293 86 6 0.409961 141 5 0.27627 37 1 0.421109 92 8 0.4131944 92 7 0.45429 111 3 0.39323 131 3 0.42092 126 3 0.66267 86 3 0.43980 123 3 0.178524 0.16509 0.19859 0.19804 0.132003 0.32622 0.20314 0.1199965 0.191258 0.23725 0.20019 0.155102 0.149738 0.13308 0.144869 0.074389 0.16421 0.151563 0.19410 0.20894 0.34950 0.21048 0.26110 0.23963 0.144750 0.160737 0.118957 0.084541 0.188734 0.138282 0.164481 0.149009 0.1335350 0.13885229 0.14482160 0.164986 0.2534811 0.3080515 0.280258 0.28798 0.29528 0.28046 0.21825 1 0.168517 0.18323 -0.00129070 8 0.241114 0.25805 -0.0169357 0.470418 0.1923439 insignificant 1 1 insignificant 0.4459736 0.313716 insignificant 1 1 insignificant -0.0185602 0.5020284 insignificant 1 insignificant 0.168517 0.3813421 -0.1563460 7 0.241114 0.417477 -0.176363 8.8381e-01 5.2248e-19 weaklyHypometh 1.0000e+00 2.6124e-16 weaklyHypometh 5.9086e-01 5.3072e-05 weaklyHypometh 1.0000e+00 1.0614e-02 weaklyHypometh -0.1339493 7.1602e-04 weaklyHypometh 6.5093e-02 weaklyHypometh 0.168517 0.35009 -0.0597856 3 0.241114 0.36042 -0.1193100 8.9491e-01 2.1565e-05 lowCoverage 1.0000e+00 0.0107826 lowCoverage 8.1690e-01 0.03400727 lowCoverage 1.00000000 1.00000 lowCoverage -0.2232348 0.0062077 lowCoverage 0.8868 lowCoverage 0.18323 0.3813421 -0.157432 7 0.25805 0.417477 -0.159427 8.2302e-01 2.4034e-09 weaklyHypometh 1.0000e+00 6.0086e-07 weaklyHypometh 4.7282e-01 3.3786e-04 weaklyHypometh 1.0000e+00 0.08446423 weaklyHypometh -0.11538911 2.1335e-03 weaklyHypometh 1.2550e-01 insignificant 0.18323 0.350087 -0.0708511 3 0.25805 0.36042 -0.1023743 8.6903e-01 3.6802e-04 lowCoverage 1.0000e+00 0.122673 lowCoverage 8.1413e-01 5.0929e-02 lowCoverage 1.0000000 1.000000 lowCoverage -0.2046746 0.01015766 lowCoverage 1.00000 lowCoverage 0.3813421 0.350087 -0.0371073 3 0.417477 0.36042 0.057053 3.1755e-02 7.9979e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.3176e-01 2.4603e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.089285 1.4746e-01 lowCoverage 1.0000000 lowCoverage chr7 100271792 100272792 79712 EPHB4 ENSG00000196411 0.17424 86 4 0.17650 132 5 0.097176 184 6 0.021429 80 1 0.061323 142 5 0.13838 120 5 0.088462 168 6 0.028175 90 5 0.033985 155 6 0.12182 137 5 0.13651 189 6 0.04784 150 5 0.085872 144 5 0.00000 20 1 0.068003 168 5 0.013986 182 5 0.073593 105 6 0.064583 103 1 0.030357 120 5 0.10093 110 5 0.14722 62 5 0.39015 47 1 0.23757 99 5 0.10967 58 5 0.012821 47 1 0.077891 193 6 0.081894 85 5 0.11966 81 6 0.068376 114 5 0.10871 153 6 0.047302 131 5 0.14179 157 5 0.254345 98 6 0.2794613 68 4 0.296614 133 5 0.11836 33 1 0.340278 59 6 0.3009259 71 5 0.33125 69 1 0.24931 91 1 0.11184 77 1 0.57534 74 1 0.35000 82 1 0.081664 0.06595 0.13056 0.11114 0.050798 0.24592 0.10386 0.0047417 0.096556 0.10798 0.11502 0.054271 0.058592 NA 0.031711 0.002252 0.06853 0.073623 0.11047 0.12571 0.27556 0.12904 0.18970 0.17129 0.061426 0.058037 0.054373 0.014124 0.080617 0.054375 0.055824 0.035039 0.0340251 0.02114364 0.04224898 0.065831 0.1839689 0.2331450 0.198623 0.19696 0.22160 0.20087 0.14266 1 0.065377 0.07009 -0.00101885 6 0.078614 0.10016 -0.0215423 0.429363 0.1410603 insignificant 1 1 insignificant 0.7441547 0.188841 insignificant 1 1 insignificant -0.0504295 0.1262301 lowCoverage 1 lowCoverage 0.065377 0.2683983 -0.2046521 5 0.078614 0.313725 -0.235111 9.4513e-01 2.4341e-20 hypomethylated 1.0000e+00 2.4341e-17 hypomethylated 5.7807e-01 1.1173e-05 hypomethylated 1.0000e+00 2.7933e-03 hypomethylated -0.1868389 1.1450e-03 lowCoverage 8.8080e-02 lowCoverage 0.065377 0.16539 -0.0781388 1 0.078614 0.23238 -0.1537625 8.3202e-01 9.7835e-06 lowCoverage 1.0000e+00 0.0097835 lowCoverage 7.2486e-01 0.01947875 lowCoverage 1.00000000 1.00000 lowCoverage -0.2453900 0.0306421 lowCoverage 1.0000 lowCoverage 0.07009 0.2683983 -0.201235 5 0.10016 0.313725 -0.213569 8.0379e-01 2.2050e-10 hypomethylated 1.0000e+00 7.3499e-08 hypomethylated 2.6074e-01 2.1414e-04 hypomethylated 1.0000e+00 0.07138127 hypomethylated -0.13640932 7.1913e-03 lowCoverage 2.9964e-01 lowCoverage 0.07009 0.165394 -0.0955441 1 0.10016 0.23238 -0.1322202 8.7987e-01 2.2900e-04 lowCoverage 1.0000e+00 0.114500 lowCoverage 7.4449e-01 1.0625e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.1949605 0.05903786 lowCoverage 1.00000 lowCoverage 0.2683983 0.165394 -0.0516107 1 0.313725 0.23238 0.081349 1.8161e-02 1.4032e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.7515e-01 2.5555e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.058551 5.0479e-01 lowCoverage 1.0000000 lowCoverage chr7 100843714 100844714 79721 EMID2 ENSG00000160963 0.64153 191 5 0.58152 146 5 0.453685 120 5 0.614785 114 5 0.574603 63 5 0.73145 319 5 0.390676 113 5 0.580652 130 5 0.618912 96 5 0.67190 88 5 0.74862 180 5 0.65958 83 5 0.617712 123 5 0.93934 33 2 0.542768 145 5 0.612157 70 5 0.509158 62 4 0.610077 182 5 0.673113 153 5 0.68303 274 5 0.65000 40 5 0.59034 50 5 0.64920 149 5 0.66245 116 5 0.580513 45 5 0.622402 248 5 0.605238 68 5 0.72533 56 3 0.752540 180 5 0.57063 201 5 0.648263 217 5 0.63611 301 5 0.466753 136 5 0.3200654 86 5 0.405391 127 5 0.46416 45 4 0.535844 146 5 0.5721789 225 5 0.63502 197 5 0.64434 165 5 0.70597 87 5 0.63662 162 5 0.65505 134 5 0.671853 0.61751 0.59218 0.66554 0.645274 0.67722 0.61375 0.6506184 0.628693 0.70674 0.71134 0.691224 0.684372 0.70751 0.682187 0.649890 0.60667 0.659847 0.64669 0.66397 0.68066 0.63986 0.68055 0.70514 0.613918 0.669606 0.660581 0.765124 0.691514 0.736053 0.698502 0.679733 0.5091727 0.35660545 0.40160337 0.472029 0.4984272 0.5923855 0.692647 0.68968 0.75110 0.68433 0.69071 5 0.680074 0.69420 -0.03071868 5 0.583126 0.67493 -0.0918028 0.944018 0.0225536 weaklyHypometh 1 1 insignificant 0.8258402 0.078704 insignificant 1 1 insignificant -0.0183218 0.5456668 lowCoverage 1 lowCoverage 0.680074 0.4993464 0.1594091 5 0.583126 0.483167 0.099959 1.8528e-09 9.9139e-01 weaklyHypermeth 1.2352e-07 1.0000e+00 weaklyHypermeth 1.0318e-05 9.9808e-01 weaklyHypermeth 7.3701e-04 1.0000e+00 weaklyHypermeth 0.1620308 4.5642e-03 lowCoverage 2.0746e-01 lowCoverage 0.680509 0.68859 -0.0367567 5 0.616377 0.64821 -0.0318289 8.8597e-01 3.5564e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.6078e-01 0.03909138 weaklyHypometh 1.00000000 1.00000 insignificant -0.0326381 0.2662221 lowCoverage 1.0000 lowCoverage 0.69420 0.4993464 0.185174 5 0.67493 0.483167 0.191762 3.8092e-09 9.9999e-01 weaklyHypermeth 2.9302e-07 1.0000e+00 weaklyHypermeth 1.5980e-05 1.0000e+00 weaklyHypermeth 1.4528e-03 1.00000000 weaklyHypermeth 0.18035265 2.9503e-03 lowCoverage 1.5528e-01 lowCoverage 0.69424 0.688591 -0.0070248 5 0.64490 0.64821 -0.0033049 4.6466e-01 3.6226e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6089e-01 2.7023e-01 insignificant 1.0000000 1.000000 insignificant -0.0143162 0.49794667 lowCoverage 1.00000 lowCoverage 0.4986877 0.688591 -0.1831544 5 0.476433 0.64821 -0.171772 1.0000e+00 2.0062e-06 weaklyHypometh 1.0000e+00 2.8660e-04 weaklyHypometh 1.0000e+00 4.4925e-06 weaklyHypometh 1.00000000 1.1849e-03 weaklyHypometh -0.194669 2.2946e-03 lowCoverage 0.2085973 lowCoverage chr7 101327737 101328737 79744 CUX1 ENSG00000160967 0.61009 155 6 0.61532 80 2 0.781250 32 2 0.557083 102 6 0.735000 49 2 0.41201 131 5 0.962963 54 2 0.850000 40 2 0.590909 22 2 0.83333 18 2 0.55471 72 2 1.00000 8 0 0.888889 36 2 0.87500 15 2 0.428571 15 2 0.555556 13 2 0.646650 73 4 0.502380 193 6 0.577381 67 5 0.66303 64 5 0.75000 12 2 1.00000 10 2 0.59072 127 6 0.87500 16 2 0.789474 38 2 0.653185 132 6 0.674370 31 2 0.90000 9 1 0.478654 58 2 0.62957 143 7 0.588289 150 6 0.55432 83 5 0.800144 44 2 0.9166667 48 2 0.338361 146 7 0.46151 65 7 0.892857 45 2 0.6253244 157 7 0.54047 164 6 0.37930 195 5 0.65647 171 5 0.48036 143 5 0.40671 131 6 0.893682 0.92344 0.78176 0.92165 0.734754 0.82576 0.96296 0.8508197 0.591654 0.83424 0.83296 1.000000 0.889800 0.87705 0.641686 0.833333 0.90873 0.842219 0.93852 0.87175 0.74863 1.00000 0.88045 0.87500 0.789474 0.849727 0.674886 0.898361 0.719212 0.859566 0.915394 0.929569 0.6984245 0.91666667 0.87867099 0.707026 0.8918813 0.9054404 0.930126 0.91151 0.90141 0.85626 0.85992 2 0.725585 0.61820 0.02874395 4 0.524022 0.53237 -0.0083521 0.124498 0.9233973 lowCoverage 1 1 lowCoverage 0.2274504 0.817634 lowCoverage 1 1 lowCoverage -0.0249595 0.6797823 lowCoverage 1 lowCoverage 0.725585 0.6619385 -0.0015012 4 0.524022 0.554651 -0.030629 5.6501e-01 1.1811e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9276e-01 2.5775e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0095291 9.3006e-01 lowCoverage 1.0000e+00 lowCoverage 0.725585 0.71734 -0.0074903 4 0.524022 0.46192 0.0621008 6.8447e-01 7.5273e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.8262e-01 0.77279930 lowCoverage 1.00000000 1.00000 lowCoverage 0.1893451 0.0139172 lowCoverage 1.0000 lowCoverage 0.62252 0.5742574 -0.018743 4 0.59617 0.458776 0.137391 1.1514e-01 3.2871e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.5790e-01 5.2817e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.03448861 7.5676e-01 lowCoverage 1.0000e+00 lowCoverage 0.62252 0.712687 -0.0111818 5 0.59617 0.41483 0.1813399 1.8727e-01 4.0954e-01 insignificant 1.0000e+00 1.000000 insignificant 6.1821e-01 7.1745e-01 insignificant 1.0000000 1.000000 insignificant 0.2143046 0.00901562 lowCoverage 1.00000 lowCoverage 0.5742574 0.712687 0.0079155 4 0.458776 0.41483 0.043949 1.7042e-01 6.1899e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.5025e-01 4.7699e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.179816 1.4135e-01 lowCoverage 1.0000000 lowCoverage chr7 101331495 101332495 79745 CUX1 ENSG00000160967 0.80429 39 3 0.87933 70 5 0.778629 90 3 0.951049 39 3 0.954167 46 3 0.99537 75 5 0.643079 116 5 0.978947 59 3 0.943182 75 3 0.92146 53 3 0.88695 98 5 0.84471 60 3 0.866873 53 3 NA 0 0 0.627381 71 3 0.941429 58 3 0.951407 65 3 0.666667 13 0 0.878864 59 3 0.84841 58 5 0.80556 48 3 1.00000 12 0 0.92879 37 3 0.78333 61 5 1.000000 21 3 0.902126 60 5 0.663325 42 3 0.86620 40 3 0.983333 40 3 0.78471 104 5 0.741866 87 5 0.80702 82 5 0.200000 86 5 0.2103623 82 5 0.000000 75 2 0.39394 24 3 0.188889 47 3 0.1825501 88 5 0.91840 45 3 0.91000 50 4 0.93333 31 3 0.86667 28 3 0.78016 35 5 0.962662 0.84571 0.90504 0.91209 0.928571 0.98413 0.82811 0.9398496 0.894481 0.88837 0.87972 0.905042 0.876824 NA 0.896429 0.937245 0.94775 0.928571 0.90512 0.89694 0.96429 1.00000 0.89394 0.73452 0.963388 0.846732 0.849087 0.911310 0.982143 0.913675 0.946685 0.909774 0.0428571 0.05395963 0.00000000 0.363636 0.2547619 0.0571966 0.882808 0.94643 0.92857 0.91429 0.74830 1 0.896234 0.89590 -0.00046851 3 0.710755 0.70025 0.0105098 0.356375 0.8516211 lowCoverage 1 1 lowCoverage 0.7366573 0.751723 lowCoverage 1 1 lowCoverage 0.0056464 0.8905738 lowCoverage 1 lowCoverage 0.897737 0.1343284 0.7702797 3 0.829214 0.168389 0.660826 2.4807e-55 1.0000e+00 lowCoverage 2.4807e-52 1.0000e+00 lowCoverage 8.4469e-15 1.0000e+00 lowCoverage 4.2234e-12 1.0000e+00 lowCoverage 0.6652112 3.6029e-06 lowCoverage 7.2058e-04 lowCoverage 0.897737 0.89418 0.0134852 3 0.829214 0.83229 -0.0030800 3.1096e-02 8.5184e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.1871e-01 0.81363229 lowCoverage 1.00000000 1.00000 lowCoverage -0.0205434 0.5965795 lowCoverage 1.0000 lowCoverage 0.89873 0.1343284 0.756333 3 0.81695 0.168389 0.648564 8.6100e-36 1.0000e+00 lowCoverage 4.3050e-33 1.0000e+00 lowCoverage 7.6053e-12 1.0000e+00 lowCoverage 3.8027e-09 1.00000000 lowCoverage 0.65956473 1.6933e-06 lowCoverage 4.2850e-04 lowCoverage 0.89873 0.894180 0.0057584 3 0.81695 0.83229 -0.0153415 2.7367e-01 6.7186e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.9732e-01 8.6285e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.0261899 0.54290176 lowCoverage 1.00000 lowCoverage 0.1343284 0.894180 -0.7227009 5 0.168389 0.83229 -0.663906 1.0000e+00 4.5593e-19 hypomethylated 1.0000e+00 3.3211e-16 hypomethylated 1.0000e+00 3.0274e-07 hypomethylated 1.00000000 1.5137e-04 hypomethylated -0.685755 3.8285e-06 lowCoverage 0.0019142 lowCoverage chr7 101364318 101365318 79748 CUX1 ENSG00000160967 0.41128 134 4 0.43336 243 5 0.536989 99 5 0.548631 116 5 0.456993 106 5 0.74153 238 5 0.412682 143 5 0.508884 127 5 0.441353 136 5 0.40357 71 4 0.52058 239 5 0.37815 85 3 0.175376 100 4 0.48269 81 4 0.564327 101 4 0.181667 69 5 0.498705 781 2 0.677673 137 4 0.489505 195 5 0.36298 182 4 0.59248 70 4 0.60000 7 0 0.37536 130 4 0.44948 72 4 0.610000 37 4 0.426492 287 5 0.365933 114 5 0.43911 37 5 0.521226 180 4 0.38894 375 5 0.569582 344 5 0.56874 171 4 0.203404 208 4 0.2499262 141 5 0.173978 240 5 0.16667 15 2 0.305380 150 5 0.6380718 259 5 0.49356 188 5 0.39712 152 5 0.52758 157 5 0.28468 112 4 0.58812 157 5 0.477163 0.34456 0.64087 0.48611 0.482060 0.62802 0.39886 0.4626504 0.435874 0.49344 0.56133 0.298816 0.187684 0.49047 0.446348 0.163857 0.75520 0.598224 0.44224 0.48790 0.63303 0.59302 0.49139 0.40252 0.651163 0.440260 0.411873 0.478580 0.572336 0.401261 0.548095 0.561069 0.1751608 0.26048099 0.16065871 0.270250 0.3527383 0.7293835 0.607494 0.45325 0.50566 0.32422 0.64941 4 0.573456 0.47862 0.09015404 5 0.577562 0.42392 0.1536376 0.051720 0.9380361 insignificant 1 1 insignificant 0.5395610 0.304386 insignificant 1 1 insignificant -0.0309343 0.4514610 lowCoverage 1 lowCoverage 0.573373 0.3264095 0.2510743 5 0.520083 0.326820 0.193263 1.5785e-05 8.9649e-01 hypermethylated 7.8926e-04 1.0000e+00 hypermethylated 8.2372e-03 9.5824e-01 weaklyHypermeth 4.3353e-01 1.0000e+00 insignificant 0.1717745 6.6803e-02 lowCoverage 1.0000e+00 lowCoverage 0.573373 0.50392 0.0557057 5 0.520083 0.43106 0.0890264 3.5184e-01 8.6908e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.3891e-01 0.24075070 insignificant 1.00000000 1.00000 insignificant 0.0031329 0.9606329 lowCoverage 1.0000 lowCoverage 0.47859 0.3264095 0.140975 5 0.39857 0.326820 0.071746 4.5496e-04 1.3065e-01 weaklyHypermeth 1.9994e-02 1.0000e+00 weaklyHypermeth 9.8020e-03 5.6475e-01 weaklyHypermeth 4.4555e-01 1.00000000 insignificant 0.20270872 3.7786e-02 lowCoverage 1.0000e+00 lowCoverage 0.47859 0.503916 -0.0361906 5 0.39857 0.43106 -0.0324904 9.1125e-01 3.7063e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.2656e-01 6.7225e-02 insignificant 1.0000000 1.000000 insignificant 0.0340672 0.58900796 lowCoverage 1.00000 lowCoverage 0.3264095 0.503916 -0.1629531 5 0.326820 0.43106 -0.104237 6.7471e-01 5.5415e-03 weaklyHypometh 1.0000e+00 2.4093e-01 insignificant 8.7520e-01 6.2725e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.168642 9.5728e-02 lowCoverage 1.0000000 lowCoverage chr7 101599697 101600697 79761 ENSG00000203382 0.91917 100 5 0.75820 82 5 0.263922 38 5 0.954545 58 5 0.733333 35 5 0.88915 149 5 0.700000 13 1 0.689496 100 5 0.866667 20 1 0.72222 53 5 0.95544 188 5 0.80000 6 0 0.792597 127 5 0.90000 48 5 0.851190 83 5 0.813333 14 1 0.000000 18 1 0.638095 77 5 0.856931 207 5 0.74728 120 5 0.70661 60 6 0.38333 76 5 0.46349 41 5 0.54989 67 5 0.770696 59 5 0.745137 104 5 0.856579 171 5 0.90000 14 0 0.774702 118 5 0.63394 98 5 0.435714 80 5 0.90630 150 6 0.709559 92 5 0.6985507 84 5 0.833333 49 2 0.50000 4 0 0.458333 53 5 0.6107048 273 5 0.06044 71 5 0.50000 82 5 0.50893 35 5 0.93333 18 1 0.34953 76 5 0.887695 0.77036 0.28763 0.96031 0.804158 0.87650 0.78169 0.8653894 0.906103 0.90376 0.93183 0.859155 0.806446 0.89261 0.857176 0.694836 NA 0.692555 0.84872 0.84675 0.84228 0.46166 0.74491 0.76928 0.832482 0.821405 0.857172 0.929577 0.809888 0.785608 0.681338 0.898112 0.7532104 0.73214942 0.85915493 NA 0.7260563 0.5787159 0.052082 0.49899 0.67363 0.85915 0.27596 1 0.820195 0.75410 0.05283508 5 0.710567 0.55065 0.1599195 0.180724 0.9893877 insignificant 1 1 insignificant 0.3399499 0.999653 insignificant 1 1 insignificant 0.0653795 0.3834344 lowCoverage 1 lowCoverage 0.820379 0.6425993 0.1851223 5 0.729382 0.556466 0.172915 7.7105e-08 9.2981e-01 weaklyHypermeth 4.8191e-06 1.0000e+00 weaklyHypermeth 1.1230e-01 8.2158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1074989 1.8594e-01 lowCoverage 1.0000e+00 lowCoverage 0.821569 0.34752 0.4739313 5 0.872239 0.40970 0.4625411 1.0483e-17 1.0000e+00 hypermethylated 1.0483e-14 1.0000000 hypermethylated 2.9488e-04 1.00000000 hypermethylated 0.04212563 1.00000 hypermethylated 0.2721321 0.1289003 lowCoverage 1.0000 lowCoverage 0.75532 0.6414414 0.130926 5 0.56331 0.486908 0.076402 4.5987e-04 8.2218e-01 weaklyHypermeth 1.9994e-02 1.0000e+00 weaklyHypermeth 1.1733e-01 4.6462e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.04211935 5.9818e-01 lowCoverage 1.0000e+00 lowCoverage 0.76172 0.340502 0.4102369 5 0.73256 0.31131 0.4212470 7.7383e-11 1.0000e+00 hypermethylated 7.7383e-08 1.000000 hypermethylated 6.0535e-04 9.9999e-01 hypermethylated 0.1008917 1.000000 insignificant 0.2067526 0.22708236 lowCoverage 1.00000 lowCoverage 0.6437613 0.340502 0.2756521 5 0.649211 0.31131 0.337897 2.2196e-05 9.2333e-01 hypermethylated 7.3986e-03 1.0000e+00 hypermethylated 9.6402e-03 7.6004e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.164633 3.2697e-01 lowCoverage 1.0000000 lowCoverage chr7 101920151 101921151 79768 POLR2J ENSG00000005075 0.68758 229 7 0.68183 302 7 0.614940 156 7 0.733652 153 6 0.638192 95 7 0.63068 422 7 0.597572 108 7 0.687262 191 7 0.526853 152 5 0.63155 92 7 0.70552 315 7 0.56190 55 3 0.715588 225 7 0.57500 22 2 0.703412 125 5 0.417593 34 2 0.756957 49 2 0.667599 173 7 0.701420 313 7 0.74575 320 6 0.69893 106 7 0.52494 58 5 0.65842 141 7 0.72934 140 7 0.741922 56 4 0.721165 190 7 0.712385 123 6 0.70978 42 4 0.597796 154 7 0.70200 270 7 0.611240 257 7 0.75536 389 7 0.630625 189 7 0.7471004 157 7 0.596252 220 7 0.51429 29 2 0.737965 135 7 0.6182673 245 7 0.67879 171 7 0.71204 261 7 0.70254 138 6 0.67459 99 6 0.68201 154 6 0.758940 0.66479 0.64791 0.81391 0.640709 0.77400 0.70004 0.6730351 0.689878 0.79108 0.75217 0.539762 0.775667 0.70544 0.738546 0.527651 0.75396 0.727048 0.74147 0.73920 0.80085 0.64401 0.72067 0.71134 0.730015 0.754730 0.695913 0.771066 0.717993 0.746753 0.671378 0.785465 0.6457601 0.76591661 0.49038820 0.448250 0.7484394 0.6822979 0.726914 0.76427 0.74330 0.72454 0.73353 4 0.700651 0.72482 -0.01924982 7 0.679430 0.60184 0.0775877 0.692466 0.0259935 weaklyHypometh 1 1 insignificant 0.7794791 0.157266 insignificant 1 1 insignificant -0.0312301 0.2624810 insignificant 1 insignificant 0.700680 0.6594872 0.0521916 7 0.681026 0.641642 0.039383 8.5924e-02 2.9724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8054e-01 5.4076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0082938 8.4381e-01 insignificant 1.0000e+00 insignificant 0.700680 0.72904 -0.0310077 7 0.681026 0.74170 -0.0606745 9.9273e-01 1.2744e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4841e-01 0.32484077 insignificant 1.00000000 1.00000 insignificant -0.0409502 0.0525581 insignificant 1.0000 insignificant 0.72519 0.6594872 0.075689 7 0.67707 0.641642 0.035430 4.8770e-02 8.6725e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.9177e-02 9.2703e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03952394 3.6648e-01 insignificant 1.0000e+00 insignificant 0.72519 0.729040 -0.0131091 7 0.67707 0.74170 -0.0646273 7.7746e-01 4.0369e-01 insignificant 1.0000e+00 1.000000 insignificant 7.4198e-01 7.6697e-01 insignificant 1.0000000 1.000000 insignificant -0.0097201 0.65429747 insignificant 1.00000 insignificant 0.6594872 0.729040 -0.0876226 7 0.641642 0.74170 -0.100058 9.1503e-01 9.6326e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3417e-01 2.8414e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.049244 2.3599e-01 insignificant 1.0000000 insignificant chr7 102115456 102116456 79772 ENSG00000214242 0.66727 137 6 0.56512 222 6 0.655581 76 5 0.819036 96 5 0.702839 72 6 0.69071 277 6 0.473056 67 6 0.700050 139 6 0.673968 73 4 0.71190 72 6 0.77308 246 6 0.71016 49 5 0.660386 163 5 0.68652 72 6 0.883053 66 4 0.812500 18 1 0.705556 26 1 0.633383 124 6 0.718443 193 6 0.79540 192 6 0.62483 70 4 0.63598 42 3 0.67488 98 6 0.57440 102 6 0.616667 31 2 0.623448 161 6 0.573489 92 4 0.59605 48 4 0.679533 115 6 0.64840 154 6 0.622387 142 6 0.72768 279 6 0.549010 145 6 0.6557822 67 6 0.662569 164 6 0.79167 17 1 0.666882 148 6 0.6741158 166 6 0.62280 107 5 0.77907 174 6 0.61211 97 5 0.76087 66 5 0.76561 124 5 0.828618 0.64135 0.67367 0.86053 0.752093 0.77324 0.61190 0.7801056 0.781434 0.78455 0.82434 0.785829 0.739260 0.77918 0.891894 0.872766 0.84226 0.800620 0.77983 0.84305 0.77443 0.73074 0.78601 0.72271 0.803571 0.742504 0.651588 0.703689 0.746482 0.727709 0.743614 0.806928 0.7146626 0.73402292 0.75859441 0.904762 0.7183074 0.7211572 0.770714 0.82870 0.74224 0.85280 0.85377 3 0.731933 0.71364 0.01989594 6 0.708332 0.61797 0.0903619 0.066082 0.9742478 insignificant 1 1 insignificant 0.0099877 0.991141 weaklyHypermeth 1 1 insignificant 0.0687575 0.0075834 lowCoverage 1 lowCoverage 0.731933 0.6973126 0.0335259 6 0.708332 0.565657 0.142675 5.6258e-03 9.0450e-01 weaklyHypermeth 2.0092e-01 1.0000e+00 insignificant 8.3440e-02 6.5052e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0352306 3.6906e-01 insignificant 1.0000e+00 insignificant 0.731933 0.76761 -0.0488069 6 0.708332 0.76538 -0.0570480 9.8736e-01 3.9993e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.4723e-01 0.20543559 insignificant 1.00000000 1.00000 insignificant -0.0061911 0.8880000 insignificant 1.0000 insignificant 0.71364 0.6973126 0.014846 6 0.61797 0.565657 0.052313 9.0547e-02 7.3672e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3670e-01 4.8673e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03352688 3.5803e-01 lowCoverage 1.0000e+00 lowCoverage 0.71364 0.767606 -0.0701422 6 0.61797 0.76538 -0.1474099 9.9969e-01 1.2586e-03 weaklyHypometh 1.0000e+00 0.314642 insignificant 9.9735e-01 1.5954e-03 weaklyHypometh 1.0000000 0.797699 insignificant -0.0749486 0.11513299 lowCoverage 1.00000 lowCoverage 0.6973126 0.767606 -0.0912955 6 0.565657 0.76538 -0.199723 9.9206e-01 7.4316e-04 weaklyHypometh 1.0000e+00 5.3083e-02 weaklyHypometh 9.4993e-01 1.0878e-02 weaklyHypometh 1.00000000 8.0620e-01 insignificant -0.041422 4.1854e-01 insignificant 1.0000000 insignificant chr7 104470829 104471829 79915 MLL5 ENSG00000005483 0.89391 393 13 0.80392 139 13 0.640823 93 9 0.879405 331 13 0.972894 70 7 0.84213 381 14 0.600080 81 7 0.836642 100 6 0.677691 80 8 0.88937 81 7 0.85841 223 13 0.62635 78 8 0.798252 113 10 NA 0 0 0.854046 101 9 0.778571 55 5 0.650510 41 4 0.876439 300 13 0.812770 155 11 0.80159 275 13 0.80476 70 5 0.86212 139 10 0.82861 249 14 0.93077 60 6 0.781670 103 10 0.744302 211 12 0.827877 63 5 0.87963 36 4 0.805917 94 8 0.79923 248 12 0.881440 174 10 0.86958 409 13 0.764543 119 7 0.6880462 128 8 0.793486 263 13 0.83333 45 4 0.569213 50 4 0.8565855 239 13 0.87037 370 13 0.86550 442 13 0.82887 396 13 0.85704 267 13 0.87497 337 13 0.897093 0.82252 0.69945 0.87751 0.963972 0.88688 0.81673 0.8208762 0.826163 0.89689 0.81997 0.856235 0.825853 NA 0.916802 0.879605 0.88487 0.853339 0.87783 0.80848 0.86189 0.89921 0.84205 0.91080 0.869567 0.839820 0.834782 0.909872 0.831697 0.932260 0.913471 0.885167 0.8292500 0.71508075 0.87716330 0.695464 0.8408356 0.8891155 0.915820 0.87423 0.87291 0.86318 0.90774 2 0.849142 0.85183 -0.01038041 12 0.847526 0.80935 0.0381731 0.762109 0.3231371 insignificant 1 1 insignificant 0.8282022 0.099990 insignificant 1 1 insignificant -0.0402479 0.1687422 insignificant 1 insignificant 0.849044 0.8092417 0.0375170 11 0.836635 0.766157 0.070478 7.9074e-03 9.8758e-01 weaklyHypermeth 2.5508e-01 1.0000e+00 insignificant 1.1236e-01 9.4329e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0435424 4.0686e-01 insignificant 1.0000e+00 insignificant 0.849191 0.87748 -0.0222428 12 0.857056 0.86941 -0.0123531 9.4424e-01 1.3211e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4972e-01 0.31905735 insignificant 1.00000000 1.00000 insignificant -0.0649397 0.0191144 weaklyHypometh 1.0000 insignificant 0.85267 0.8092417 0.047149 11 0.84335 0.766157 0.077197 4.2253e-03 9.9782e-01 weaklyHypermeth 1.5090e-01 1.0000e+00 insignificant 5.5898e-02 9.9881e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.08379035 1.1706e-01 insignificant 1.0000e+00 insignificant 0.85183 0.877416 -0.0017589 12 0.80935 0.86070 -0.0513498 6.6707e-01 3.0127e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8874e-01 6.4405e-01 insignificant 1.0000000 1.000000 insignificant -0.0246918 0.16779868 insignificant 1.00000 insignificant 0.8092417 0.877280 -0.0507086 11 0.766157 0.85075 -0.084596 9.6669e-01 1.1043e-03 weaklyHypometh 1.0000e+00 6.4957e-02 weaklyHypometh 9.8426e-01 3.3401e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant -0.108482 5.4879e-02 insignificant 1.0000000 insignificant chr7 108376979 108377979 80061 C7orf66 ENSG00000205174 0.75970 436 14 0.55597 261 14 0.70256 229 12 0.57246 299 14 0.67457 101 9 0.72905 537 14 0.66666 182 14 0.76428 181 11 0.66395 133 9 0.68008 154 13 0.71213 382 14 0.65203 92 8 0.73561 213 14 0.57508 53 7 0.73268 210 14 0.71429 83 7 0.70455 110 8 0.70126 316 14 0.76377 191 14 0.70340 459 14 0.78769 88 6 0.75521 151 14 0.72746 249 14 0.70279 98 10 0.78187 119 11 0.69304 297 14 0.68826 151 11 0.68129 63 6 0.70549 180 11 0.74783 222 14 0.73226 332 14 0.70295 582 14 0.68278 221 14 0.63562 240 14 0.66855 249 14 0.76017 117 9 0.54229 136 6 0.65323 324 14 0.73516 465 14 0.76952 382 14 0.78182 268 14 0.75203 389 11 0.65756 328 14 0.78128 0.65021 0.71155 0.69038 0.73908 0.79104 0.70793 0.73900 0.73998 0.73562 0.79489 0.71194 0.79519 0.74201 0.75290 0.79154 0.75518 0.78730 0.80071 0.77690 0.77196 0.78211 0.74879 0.68169 0.77335 0.72398 0.73455 0.70823 0.74773 0.78095 0.77854 0.72476 0.71552 0.74778 0.70388 0.67650 0.65507 0.63591 0.77025 0.78112 0.81569 0.80440 0.81278 6 0.74037 0.73697 0.0050883 14 0.65214 0.68791 -0.035768 0.61885 0.60583 insignificant 1 1 insignificant 0.88823 0.24332 insignificant 1 1 insignificant -0.037309 0.037855 weaklyHypometh 1 insignificant 0.74111 0.68221 0.061028 14 0.71146 0.64404 0.067422 7.4365e-05 0.99959 weaklyHypermeth 0.024788 1 weaklyHypermeth 0.0017055 0.99983 weaklyHypermeth 0.42636 1 insignificant 0.031098 0.36152 insignificant 1 insignificant 0.74042 0.79476 -0.038116 14 0.65129 0.68319 -0.0319072 0.96967 0.0094780 weaklyHypometh 1 1.0000 insignificant 0.99579 5.5818e-03 weaklyHypometh 1 1.000000 insignificant -0.051013 0.0858900 insignificant 1 insignificant 0.73734 0.68221 0.053233 14 0.72549 0.64404 0.081455 1.9556e-04 0.99928 weaklyHypermeth 0.032593 1 weaklyHypermeth 0.00035479 0.99977 weaklyHypermeth 0.093624 1 weaklyHypermeth 0.068407 0.06528 insignificant 1 insignificant 0.73686 0.79476 -0.043241 14 0.66955 0.68319 -0.013643 0.76690 0.0074802 weaklyHypometh 1 1 insignificant 0.90303 0.070363 insignificant 1 1 insignificant -0.013705 0.592570 insignificant 1 insignificant 0.68221 0.79508 -0.096598 14 0.64404 0.70762 -0.063584 0.99973 5.4632e-08 weaklyHypometh 1 2.7316e-05 weaklyHypometh 1.00000 1.5135e-05 weaklyHypometh 1 0.012366 weaklyHypometh -0.082112 0.0505392 insignificant 1 insignificant chr7 109600077 109601077 80133 C7orf66 ENSG00000205174 0.72667 232 9 0.68260 159 9 0.56706 164 9 0.78721 196 9 0.63274 113 9 0.77291 397 9 0.47241 146 9 0.66816 168 9 0.67565 88 9 0.69631 125 9 0.62516 298 9 0.58888 106 8 0.60214 170 9 0.80303 34 4 0.66954 144 9 0.63302 111 6 0.51309 82 6 0.78491 202 9 0.67082 277 9 0.81689 349 9 0.58743 82 5 0.70311 91 9 0.63292 161 9 0.65214 72 6 0.74396 82 8 0.62338 264 9 0.80592 128 9 0.77288 91 5 0.57004 137 9 0.72450 245 9 0.65335 264 9 0.72383 479 9 0.53267 224 9 0.60582 147 9 0.70077 203 9 0.68309 86 6 0.69091 114 8 0.59563 263 9 0.81065 233 9 0.72424 294 9 0.73283 222 9 0.76355 223 9 0.83148 292 9 0.76231 0.76932 0.65671 0.80086 0.67214 0.78623 0.64544 0.72937 0.69999 0.71394 0.74204 0.65818 0.68998 0.75440 0.71441 0.62868 0.56979 0.78131 0.73628 0.82423 0.77855 0.82442 0.73679 0.70396 0.76364 0.72802 0.85148 0.85787 0.68332 0.75877 0.78554 0.76112 0.61701 0.63661 0.71280 0.68970 0.69632 0.71445 0.84429 0.76607 0.76726 0.78368 0.86490 6 0.70739 0.74284 -0.0372827 9 0.60967 0.58709 0.022584 0.80841 0.13169 insignificant 1 1 insignificant 0.89811 0.03747 weaklyHypometh 1 1 insignificant -0.013329 0.661757 insignificant 1 insignificant 0.70777 0.66056 0.049420 9 0.66911 0.61075 0.058360 7.9860e-04 0.97615 weaklyHypermeth 0.159721 1 insignificant 0.0068227 0.95829 weaklyHypermeth 1.00000 1 insignificant 0.034645 0.33851 insignificant 1 insignificant 0.70812 0.79589 -0.091808 9 0.68790 0.77542 -0.0875250 0.99941 0.0003368 weaklyHypometh 1 0.3368 insignificant 0.99994 4.8418e-05 weaklyHypometh 1 0.048418 weaklyHypometh -0.103090 0.0042288 weaklyHypometh 1 insignificant 0.74424 0.66056 0.086402 9 0.64996 0.61075 0.039214 6.5184e-05 0.99527 weaklyHypermeth 0.016296 1 weaklyHypermeth 0.00037450 0.99630 weaklyHypermeth 0.093624 1 weaklyHypermeth 0.047974 0.19557 insignificant 1 insignificant 0.74711 0.79589 -0.051262 9 0.72218 0.77542 -0.053242 0.96171 0.0093283 weaklyHypometh 1 1 insignificant 0.94127 0.163441 insignificant 1 1 insignificant -0.089761 0.011484 weaklyHypometh 1 insignificant 0.66151 0.79589 -0.135847 9 0.64157 0.77542 -0.133851 0.99929 1.1416e-08 weaklyHypometh 1 1.1416e-05 weaklyHypometh 0.99934 2.4732e-05 weaklyHypometh 1 0.012366 weaklyHypometh -0.137735 0.0033692 weaklyHypometh 1 insignificant chr7 110513702 110514702 80235 ENSG00000208706 0.72049 99 7 0.54674 137 7 0.54875 43 5 0.44168 49 3 0.44615 50 7 0.60063 129 7 0.50313 53 7 0.68906 80 7 0.66071 51 7 0.64286 19 0 0.55041 188 7 0.75000 5 0 0.50448 58 6 0.59864 42 5 0.47936 58 7 0.85000 20 0 1.00000 4 0 0.62698 60 1 0.63452 50 7 0.68012 85 3 0.51429 27 3 0.50000 2 0 0.67857 41 3 0.52126 50 7 0.43026 47 4 0.57015 123 7 0.50035 44 5 0.57143 19 1 0.61429 72 7 0.52804 105 7 0.71007 109 3 0.56587 122 7 0.53395 85 7 0.48452 51 7 0.60119 108 7 0.57143 10 0 0.17544 35 3 0.56949 121 7 0.54847 110 7 0.58660 105 7 0.60330 95 7 0.65121 48 3 0.56883 106 7 0.78215 0.58154 0.63858 0.55240 0.52785 0.66231 0.65385 0.76050 0.67514 0.63462 0.61948 0.69584 0.58856 0.69780 0.58969 0.74298 0.77361 0.68803 0.70353 0.71614 0.54578 0.73542 0.73077 0.59364 0.58350 0.62597 0.67334 0.67308 0.65625 0.63300 0.72756 0.66453 0.60053 0.57853 0.69712 0.67308 0.56749 0.61335 0.66380 0.66565 0.67811 0.72335 0.66259 0 0.58047 0.50197 0.0210407 7 0.60716 0.49607 0.111090 0.44038 0.98061 insignificant 1 1 insignificant 0.13928 0.88799 insignificant 1 1 insignificant 0.065021 0.099692 lowCoverage 1 lowCoverage 0.58047 0.50732 0.029015 7 0.60716 0.39171 0.215446 5.5997e-01 0.99575 insignificant 1.000000 1 insignificant 0.1818197 0.99949 insignificant 1.00000 1 insignificant 0.134400 0.10106 lowCoverage 1 lowCoverage 0.58027 0.54095 -0.006721 7 0.58166 0.58419 -0.0025337 0.74782 0.3641470 insignificant 1 1.0000 insignificant 0.73769 4.9945e-01 insignificant 1 1.000000 insignificant 0.032053 0.3746024 lowCoverage 1 lowCoverage 0.50197 0.50732 0.010854 7 0.49607 0.39171 0.104356 8.5105e-01 0.95362 insignificant 1.000000 1 insignificant 0.79452986 0.97040 insignificant 1.000000 1 insignificant 0.069379 0.35023 lowCoverage 1 lowCoverage 0.50264 0.54095 -0.026233 7 0.56581 0.58419 -0.018377 0.90113 0.0052382 weaklyHypometh 1 1 insignificant 0.80277 0.019079 weaklyHypometh 1 1 insignificant -0.032968 0.269359 lowCoverage 1 lowCoverage 0.51106 0.54095 -0.035272 7 0.55959 0.58419 -0.024599 0.96459 1.3780e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.98293 6.2567e-02 insignificant 1 1.000000 insignificant -0.102347 0.1808721 insignificant 1 insignificant chr7 126639701 126640701 81470 MIR592 ENSG00000207692 0.86558 482 15 0.80852 242 11 0.74470 157 9 0.85022 394 15 0.86863 93 9 0.80834 484 16 0.79930 136 8 0.76953 203 16 0.83888 127 9 0.75377 159 12 0.78699 294 16 0.82942 78 7 0.83842 195 11 NA 0 0 0.61736 131 12 0.67115 49 5 0.76619 99 8 0.89335 359 15 0.83654 206 15 0.82840 418 15 0.87577 79 7 0.861962 161 13 0.82779 289 15 0.72445 96 10 0.83165 111 8 0.86782 398 15 0.85632 124 9 0.85354 46 3 0.66765 215 11 0.85193 353 15 0.82546 319 16 0.78706 575 16 0.766970 205 11 0.7707395 178 11 0.778440 311 16 0.866003 108 9 0.766558 70 9 0.781183 318 15 0.81241 425 15 0.91200 476 15 0.83292 408 15 0.84071 330 15 0.87345 489 15 0.89261 0.79936 0.78649 0.86014 0.86798 0.81269 0.80242 0.78738 0.78825 0.79781 0.84397 0.83076 0.82033 NA 0.78626 0.82227 0.80385 0.89354 0.88871 0.85192 0.89235 0.88844 0.83642 0.84736 0.82577 0.88477 0.80509 0.89027 0.79992 0.89670 0.85527 0.79110 0.722086 7.6521e-01 0.8289811 0.841817 0.818032 0.799363 0.88157 0.92720 0.83694 0.87596 0.901097 4 0.82559 0.82610 -0.0093611 15 0.82981 0.80087 0.02894143 0.566523 4.7597e-01 insignificant 1 1.0000000 insignificant 0.800829 0.20831431 insignificant 1 1.00000 insignificant -0.0205841 0.400979 insignificant 1 insignificant 0.82559 0.780672 0.046670 15 0.82981 0.780791 0.0490211 1.8720e-03 1.00000 weaklyHypermeth 6.2400e-02 1 weaklyHypermeth 4.6191e-02 0.98861 weaklyHypermeth 1.0000e+00 1 insignificant 0.010384 6.4625e-01 insignificant 1.0000e+00 insignificant 0.82559 0.86601 -0.0529344 15 0.82981 0.87801 -0.0482008 9.9999e-01 0.00654854 weaklyHypometh 1.00000000 1.00000 insignificant 0.9976930 0.08042875 insignificant 1.00000 1.00000 insignificant -0.05559892 0.03632584 weaklyHypometh 1.00000 insignificant 0.82610 0.780672 0.054136 15 0.80087 0.780791 0.0200797 8.1820e-04 0.99942 weaklyHypermeth 3.1469e-02 1 weaklyHypermeth 5.1509e-02 0.99338 insignificant 1.0000e+00 1 insignificant 0.030968 2.1887e-01 insignificant 1.00000000 insignificant 0.82610 0.86601 -0.04567973 15 0.80087 0.87801 -0.0771422 9.9998e-01 5.3413e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9435e-01 0.162357 insignificant 1.00000000 1 insignificant -0.03501481 0.191017 insignificant 1 insignificant 0.780672 0.86601 -0.098252 15 0.780791 0.87801 -0.097222 1.00000 3.2829e-08 weaklyHypometh 1 4.1037e-06 weaklyHypometh 0.999987 8.1335e-04 weaklyHypometh 1 0.07394115 weaklyHypometh -0.065983 0.02134156 weaklyHypometh 1.000000 insignificant chr7 127046649 127047649 81492 PAX4 ENSG00000106331 0.19656 407 7 0.17823 394 7 0.39266 370 9 0.24653 358 5 0.27600 352 9 0.25960 407 8 0.21631 512 9 0.25748 415 9 0.19098 598 9 0.18217 457 9 0.19563 348 7 0.25307 454 9 0.37729 478 7 0.089718 101 3 0.27241 455 9 0.14114 356 7 0.11515 411 8 0.28728 421 5 0.16852 253 7 0.15829 411 9 0.28920 91 7 0.117895 180 8 0.19276 368 7 0.24311 151 8 0.27409 95 3 0.34734 404 9 0.20905 147 8 0.27442 134 9 0.40487 264 7 0.33131 486 9 0.46961 360 7 0.15426 552 9 0.032882 395 9 0.0048309 283 7 0.016667 141 4 0.079365 105 5 0.036467 117 9 0.016737 418 9 0.13703 438 7 0.13136 442 7 0.35717 426 5 0.28403 419 5 0.10922 384 6 0.16751 0.16452 0.45966 0.15690 0.28882 0.26810 0.23363 0.23337 0.25048 0.19097 0.21290 0.22014 0.34971 0.16713 0.25603 0.20447 0.13030 0.18566 0.17254 0.15128 0.22614 0.17325 0.28147 0.22644 0.17315 0.35018 0.18734 0.19429 0.29922 0.34459 0.46371 0.19283 0.044527 9.3101e-05 0.0016713 0.024166 0.010170 0.015550 0.19745 0.17384 0.21702 0.17626 0.097671 5 0.21362 0.27692 -0.0679198 9 0.21748 0.27467 -0.05718396 0.999371 1.2265e-05 weaklyHypometh 1 0.0061327 weaklyHypometh 0.982641 0.01130445 weaklyHypometh 1 1.00000 insignificant -0.0529088 0.139120 insignificant 1 insignificant 0.21362 0.021247 0.183765 7 0.21748 0.025513 0.1919709 7.8704e-23 1.00000 weaklyHypermeth 1.3117e-20 1 weaklyHypermeth 8.8080e-16 1.00000 weaklyHypermeth 4.4040e-13 1 weaklyHypermeth 0.191593 2.2806e-09 weaklyHypermeth 5.7015e-07 weaklyHypermeth 0.21362 0.18492 0.0453302 6 0.21748 0.17924 0.0382486 9.5834e-03 0.87847483 weaklyHypermeth 0.87686350 1.00000 insignificant 0.0013144 0.97478911 weaklyHypermeth 0.43813 1.00000 insignificant 0.01898952 0.73120497 insignificant 1.00000 insignificant 0.27692 0.021247 0.253172 7 0.27467 0.025513 0.2491548 6.3833e-23 1.00000 hypermethylated 1.2767e-20 1 hypermethylated 3.3916e-12 1.00000 hypermethylated 1.6958e-09 1 hypermethylated 0.244502 2.2493e-06 hypermethylated 0.00056231 hypermethylated 0.27692 0.18492 0.11226445 6 0.27467 0.17924 0.0954326 2.2155e-05 9.9908e-01 weaklyHypermeth 4.4310e-03 1.000000 weaklyHypermeth 5.1057e-04 0.999460 weaklyHypermeth 0.10211354 1 insignificant 0.07189833 0.250659 insignificant 1 insignificant 0.021247 0.18492 -0.144802 6 0.025513 0.17924 -0.153722 0.99992 5.5860e-15 weaklyHypometh 1 2.7930e-12 weaklyHypometh 0.999639 8.7020e-07 weaklyHypometh 1 0.00021755 weaklyHypometh -0.172604 0.02318731 weaklyHypometh 1.000000 insignificant chr7 127046799 127047799 81493 PAX4 ENSG00000106331 0.19656 407 7 0.17823 394 7 0.39266 370 9 0.24653 358 5 0.27600 352 9 0.25960 407 8 0.21631 512 9 0.25748 415 9 0.19098 598 9 0.18217 457 9 0.19563 348 7 0.25307 454 9 0.37729 478 7 0.089718 101 3 0.27241 455 9 0.14114 356 7 0.11515 411 8 0.28728 421 5 0.16852 253 7 0.15829 411 9 0.28920 91 7 0.117895 180 8 0.19276 368 7 0.24311 151 8 0.27409 95 3 0.34734 404 9 0.20905 147 8 0.27442 134 9 0.40487 264 7 0.33131 486 9 0.46961 360 7 0.15426 552 9 0.032882 395 9 0.0048309 283 7 0.016667 141 4 0.079365 105 5 0.036467 117 9 0.016737 418 9 0.13703 438 7 0.13136 442 7 0.35717 426 5 0.28403 419 5 0.10922 384 6 0.16751 0.16452 0.45966 0.15690 0.28882 0.26810 0.23363 0.23337 0.25048 0.19097 0.21290 0.22014 0.34971 0.16713 0.25603 0.20447 0.13030 0.18566 0.17254 0.15128 0.22614 0.17325 0.28147 0.22644 0.17315 0.35018 0.18734 0.19429 0.29922 0.34459 0.46371 0.19283 0.044527 9.3101e-05 0.0016713 0.024166 0.010170 0.015550 0.19745 0.17384 0.21702 0.17626 0.097671 5 0.21362 0.27692 -0.0679198 9 0.21748 0.27467 -0.05718396 0.999371 1.2265e-05 weaklyHypometh 1 0.0061327 weaklyHypometh 0.982641 0.01130445 weaklyHypometh 1 1.00000 insignificant -0.0529088 0.139120 insignificant 1 insignificant 0.21362 0.021247 0.183765 7 0.21748 0.025513 0.1919709 7.8704e-23 1.00000 weaklyHypermeth 1.3117e-20 1 weaklyHypermeth 8.8080e-16 1.00000 weaklyHypermeth 4.4040e-13 1 weaklyHypermeth 0.191593 2.2806e-09 weaklyHypermeth 5.7015e-07 weaklyHypermeth 0.21362 0.18492 0.0453302 6 0.21748 0.17924 0.0382486 9.5834e-03 0.87847483 weaklyHypermeth 0.87686350 1.00000 insignificant 0.0013144 0.97478911 weaklyHypermeth 0.43813 1.00000 insignificant 0.01898952 0.73120497 insignificant 1.00000 insignificant 0.27692 0.021247 0.253172 7 0.27467 0.025513 0.2491548 6.3833e-23 1.00000 hypermethylated 1.2767e-20 1 hypermethylated 3.3916e-12 1.00000 hypermethylated 1.6958e-09 1 hypermethylated 0.244502 2.2493e-06 hypermethylated 0.00056231 hypermethylated 0.27692 0.18492 0.11226445 6 0.27467 0.17924 0.0954326 2.2155e-05 9.9908e-01 weaklyHypermeth 4.4310e-03 1.000000 weaklyHypermeth 5.1057e-04 0.999460 weaklyHypermeth 0.10211354 1 insignificant 0.07189833 0.250659 insignificant 1 insignificant 0.021247 0.18492 -0.144802 6 0.025513 0.17924 -0.153722 0.99992 5.5860e-15 weaklyHypometh 1 2.7930e-12 weaklyHypometh 0.999639 8.7020e-07 weaklyHypometh 1 0.00021755 weaklyHypometh -0.172604 0.02318731 weaklyHypometh 1.000000 insignificant chr7 127193723 127194723 81515 SND1 ENSG00000197157 0.89935 89 5 0.71258 98 5 0.63636 38 5 0.73111 66 5 0.53571 28 2 0.74264 267 5 0.43492 41 5 0.70490 129 5 0.62222 35 2 0.86795 29 2 0.86376 198 5 0.75000 14 0 0.50292 60 5 0.950000 34 2 0.58654 41 2 1.00000 2 0 0.41667 7 0 0.74127 75 5 0.79889 88 5 0.73558 180 5 0.64649 61 5 0.713845 41 4 0.64815 55 5 0.76232 55 5 0.68929 27 3 0.87659 118 5 0.63828 116 5 0.52667 22 2 0.94182 48 2 0.57463 69 5 0.67274 115 5 0.73120 149 5 0.614489 77 5 0.7166667 37 2 0.835688 69 5 0.650000 17 0 0.552714 82 5 0.662088 117 5 0.74365 50 5 0.72579 66 5 0.58599 68 5 0.96667 37 2 0.67282 83 5 0.87747 0.75178 0.80538 0.74257 0.78521 0.80743 0.58538 0.76956 0.83367 0.88326 0.80449 0.78521 0.72128 0.92606 0.76815 0.87960 0.57042 0.83903 0.82739 0.81546 0.67862 0.76090 0.79687 0.84205 0.68729 0.87380 0.78654 0.60047 0.91524 0.68950 0.77541 0.87180 0.700198 7.7465e-01 0.8066442 0.701878 0.712211 0.709251 0.80241 0.83920 0.75730 0.95070 0.741830 0 0.78934 0.77511 0.0134280 5 0.64685 0.74894 -0.10208895 0.771900 5.9318e-01 insignificant 1 1.0000000 insignificant 0.758500 0.38371276 insignificant 1 1.00000 insignificant 0.0098343 0.844299 lowCoverage 1 lowCoverage 0.78934 0.724311 0.075359 5 0.64685 0.649142 -0.0022875 5.7247e-03 0.91207 weaklyHypermeth 1.6837e-01 1 insignificant 1.2341e-01 0.91808 insignificant 1.0000e+00 1 insignificant 0.039728 4.7146e-01 lowCoverage 1.0000e+00 lowCoverage 0.79059 0.80263 -0.0011757 5 0.66024 0.74436 -0.0841170 5.1940e-01 0.24328427 insignificant 1.00000000 1.00000 insignificant 0.8864583 0.20091398 insignificant 1.00000 1.00000 insignificant -0.02731570 0.71903762 lowCoverage 1.00000 lowCoverage 0.77511 0.724311 0.064382 5 0.74894 0.649142 0.0998015 2.9558e-01 0.99298 insignificant 1.0000e+00 1 insignificant 2.1985e-01 0.98961 insignificant 1.0000e+00 1 insignificant 0.029893 5.7602e-01 lowCoverage 1.00000000 lowCoverage 0.77434 0.80263 -0.01274078 5 0.67721 0.74436 -0.0671455 7.9219e-01 3.6134e-01 insignificant 1.0000e+00 1.000000 insignificant 9.0574e-01 0.285407 insignificant 1.00000000 1 insignificant -0.03715005 0.621438 lowCoverage 1 lowCoverage 0.725441 0.80263 -0.074169 5 0.691754 0.74436 -0.052604 0.99508 3.0806e-02 weaklyHypometh 1 9.3353e-01 insignificant 0.997209 9.3687e-02 insignificant 1 1.00000000 insignificant -0.067043 0.39865493 lowCoverage 1.000000 lowCoverage chr7 127213156 127214156 81522 SND1 ENSG00000197157 0.83482 311 8 0.78532 145 8 0.76471 133 8 0.81344 162 8 0.81944 39 3 0.78724 212 8 0.81895 102 8 0.75931 117 8 0.73550 76 5 0.82348 88 8 0.84402 189 8 0.87879 77 7 0.71978 123 8 0.538462 27 2 0.74922 104 8 0.68409 54 7 0.84909 71 7 0.78264 165 8 0.76847 136 8 0.84371 222 8 0.60000 28 1 0.790152 64 5 0.84129 257 8 0.86210 64 5 0.81637 51 6 0.79549 153 8 0.62222 73 5 0.70079 49 6 0.81646 103 7 0.73793 153 8 0.76031 145 8 0.81419 258 8 0.750232 133 8 0.7251593 124 8 0.821960 142 8 0.712799 75 7 0.744925 67 5 0.646640 186 8 0.86126 308 8 0.83743 252 8 0.79488 229 8 0.81602 214 8 0.84033 296 8 0.85218 0.80981 0.72303 0.85197 0.91557 0.81716 0.82073 0.79453 0.73929 0.82710 0.89056 0.87939 0.77066 0.85246 0.80083 0.75625 0.82625 0.81826 0.81096 0.86683 0.76274 0.77089 0.87277 0.87135 0.81418 0.83649 0.70499 0.71722 0.80763 0.78968 0.75797 0.82858 0.770621 7.2728e-01 0.8125314 0.725280 0.710913 0.727531 0.88581 0.87746 0.82004 0.84778 0.875907 4 0.80259 0.79399 0.0040261 8 0.80723 0.75528 0.05195270 0.235714 7.3034e-01 insignificant 1 1.0000000 insignificant 0.075563 0.65640860 insignificant 1 1.00000 insignificant 0.0169154 0.570999 insignificant 1 insignificant 0.80259 0.734525 0.065317 8 0.80723 0.726044 0.0811852 2.7797e-04 0.98687 weaklyHypermeth 9.9274e-03 1 weaklyHypermeth 8.3387e-04 0.85903 weaklyHypermeth 5.1865e-02 1 weaklyHypermeth 0.046406 1.3478e-01 insignificant 1.0000e+00 insignificant 0.80251 0.85450 -0.0419822 8 0.79029 0.83141 -0.0411266 9.9894e-01 0.01484267 weaklyHypometh 1.00000000 1.00000 insignificant 0.9989152 0.02855529 weaklyHypometh 1.00000 1.00000 insignificant -0.04995736 0.02254755 weaklyHypometh 1.00000 insignificant 0.79399 0.734525 0.063030 8 0.75528 0.726044 0.0292325 2.9146e-03 0.92558 weaklyHypermeth 1.0409e-01 1 insignificant 3.2897e-02 0.85680 weaklyHypermeth 1.0000e+00 1 insignificant 0.029490 3.9414e-01 insignificant 1.00000000 insignificant 0.79496 0.85450 -0.04512006 8 0.78785 0.83141 -0.0435675 9.9349e-01 5.1257e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.7153e-01 0.017483 weaklyHypometh 1.00000000 1 insignificant -0.06687281 0.024668 weaklyHypometh 1 insignificant 0.735823 0.85450 -0.106742 8 0.740889 0.83141 -0.090525 0.98751 6.5203e-05 weaklyHypometh 1 4.5664e-03 weaklyHypometh 0.863760 1.0179e-03 weaklyHypometh 1 0.08482434 weaklyHypometh -0.096363 0.00718405 weaklyHypometh 0.653096 insignificant chr7 127407533 127408533 81573 SND1 ENSG00000197157 0.86508 388 12 0.81419 112 11 0.74144 98 9 0.87679 312 12 0.95500 62 5 0.85895 273 13 0.49199 60 4 0.71715 57 4 0.80238 47 3 0.89905 64 8 0.90091 224 13 0.89792 49 7 0.73088 107 6 NA 0 0 0.68932 60 7 0.83333 16 0 0.75238 33 1 0.92414 302 12 0.91001 120 11 0.81994 263 14 0.96296 19 0 0.815278 89 9 0.86927 95 7 0.95833 41 2 0.97319 65 5 0.84561 203 11 0.65509 60 5 0.92222 24 2 0.89268 60 5 0.86913 196 13 0.92326 149 13 0.82667 347 13 0.714491 115 9 0.8227368 93 7 0.746464 221 13 0.865801 49 7 0.840278 45 4 0.751405 158 11 0.94561 304 12 0.89354 333 12 0.91441 321 12 0.95814 268 12 0.91263 358 12 0.91574 0.93709 0.82425 0.94938 0.98611 0.90638 0.66667 0.78344 0.81852 0.90360 0.94263 0.86028 0.82123 NA 0.86634 0.86481 0.76270 0.94596 0.93569 0.86745 0.94444 0.88531 0.90051 0.98664 0.94596 0.87942 0.89907 0.96667 0.91991 0.92556 0.97196 0.86594 0.756321 8.3319e-01 0.8250379 0.971958 0.847528 0.849417 0.94919 0.94349 0.94917 0.96752 0.940120 1 0.87684 0.85979 0.0018636 9 0.84828 0.80761 0.04066542 0.512264 8.0248e-01 insignificant 1 1.0000000 insignificant 0.998949 0.00337085 inconclusive 1 1.00000 insignificant -0.0613604 0.096804 insignificant 1 insignificant 0.87684 0.792952 0.083370 11 0.84828 0.784893 0.0633829 3.6431e-06 0.99994 weaklyHypermeth 1.9174e-04 1 weaklyHypermeth 4.6160e-01 0.98171 insignificant 1.0000e+00 1 insignificant 0.024585 4.9653e-01 insignificant 1.0000e+00 insignificant 0.87718 0.93182 -0.0552978 10 0.85517 0.92651 -0.0713354 9.9998e-01 0.00071775 weaklyHypometh 1.00000000 0.71775 insignificant 0.9998332 0.00030478 weaklyHypometh 1.00000 0.30478 insignificant -0.11008428 0.00066428 weaklyHypometh 0.18795 insignificant 0.85979 0.792952 0.091372 10 0.80761 0.784893 0.0227174 2.6809e-05 0.99999 weaklyHypermeth 1.3404e-03 1 weaklyHypermeth 1.4474e-02 0.99999 weaklyHypermeth 6.2929e-01 1 insignificant 0.085945 2.9340e-02 weaklyHypermeth 1.00000000 insignificant 0.86022 0.93182 -0.05912192 10 0.85155 0.92651 -0.0749530 9.9999e-01 3.7891e-05 weaklyHypometh 1.0000e+00 0.037891 weaklyHypometh 9.3422e-01 0.131442 insignificant 1.00000000 1 insignificant -0.04872388 0.101924 insignificant 1 insignificant 0.792035 0.93182 -0.153732 10 0.754163 0.92651 -0.172344 1.00000 3.9437e-12 weaklyHypometh 1 1.3146e-09 weaklyHypometh 0.999987 2.8983e-04 weaklyHypometh 1 0.03220295 weaklyHypometh -0.134669 0.00169445 weaklyHypometh 0.245984 insignificant chr7 128095885 128096885 81624 ENSG00000219445 0.89290 511 16 0.73171 153 11 0.74634 155 8 0.84096 375 15 0.81271 111 11 0.85373 356 14 0.88035 93 7 0.77374 103 9 0.63766 67 8 0.75537 66 8 0.83334 293 15 0.94915 72 5 0.78213 153 8 NA 0 0 0.80449 132 11 0.73724 60 5 0.85729 61 5 0.82919 400 15 0.92229 154 11 0.88725 299 14 0.80774 58 5 0.811197 110 8 0.81270 215 11 0.88299 58 8 0.86212 92 8 0.80741 229 14 0.77808 103 7 0.67308 45 5 0.85034 99 8 0.76158 239 15 0.93784 210 14 0.86885 470 15 0.774082 132 12 0.7134596 111 10 0.828992 217 12 0.868878 63 8 0.766071 63 8 0.758162 235 14 0.92488 401 16 0.86714 442 15 0.89250 418 15 0.90167 331 15 0.82209 350 15 0.91699 0.84774 0.80654 0.91732 0.93199 0.85895 0.86316 0.83880 0.70600 0.85236 0.90275 0.94126 0.89037 NA 0.92511 0.92486 0.93116 0.79542 0.93165 0.89922 0.92990 0.85056 0.91752 0.86912 0.87577 0.87741 0.79717 0.87364 0.80068 0.91735 0.91114 0.87550 0.763190 7.7271e-01 0.8058993 0.882199 0.788302 0.856070 0.90484 0.88165 0.88833 0.91040 0.888036 3 0.87864 0.86515 0.0121864 14 0.84411 0.79695 0.04715878 0.153720 9.8432e-01 insignificant 1 1.0000000 insignificant 0.398381 0.49153530 insignificant 1 1.00000 insignificant -0.0039057 0.882698 insignificant 1 insignificant 0.87874 0.801462 0.072136 14 0.85277 0.755622 0.0971498 7.0902e-05 0.99995 weaklyHypermeth 2.8361e-03 1 weaklyHypermeth 4.1712e-02 0.90271 weaklyHypermeth 1.0000e+00 1 insignificant 0.032314 2.8090e-01 insignificant 1.0000e+00 insignificant 0.87944 0.90422 -0.0189471 14 0.86215 0.88467 -0.0225246 9.5037e-01 0.29911334 insignificant 1.00000000 1.00000 insignificant 0.7664049 0.05118944 insignificant 1.00000 1.00000 insignificant -0.06440455 0.02198560 weaklyHypometh 1.00000 insignificant 0.86515 0.802439 0.059507 14 0.79695 0.800070 -0.0031178 4.9320e-03 0.99984 weaklyHypermeth 1.7007e-01 1 insignificant 9.6799e-02 0.97261 insignificant 1.0000e+00 1 insignificant 0.036220 2.4757e-01 insignificant 1.00000000 insignificant 0.86649 0.90422 -0.02407671 14 0.84676 0.88467 -0.0379086 9.9899e-01 1.6514e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8166e-01 0.572965 insignificant 1.00000000 1 insignificant -0.06049888 0.038274 weaklyHypometh 1 insignificant 0.802198 0.90422 -0.086813 14 0.787575 0.88467 -0.097096 0.99998 1.9281e-04 weaklyHypometh 1 1.1342e-02 weaklyHypometh 0.997481 2.8833e-02 weaklyHypometh 1 1.00000000 insignificant -0.096719 0.00829413 weaklyHypometh 0.691177 insignificant chr7 128339522 128340522 81630 KCP ENSG00000135253 0.93477 342 10 0.81011 365 10 0.81204 478 10 0.84631 248 10 0.83930 258 10 0.87464 548 10 0.86724 375 10 0.92633 286 10 0.88714 335 10 0.95187 342 10 0.89500 458 10 0.85201 188 10 0.90248 293 8 0.907835 174 7 0.84112 354 10 0.89600 132 8 0.57937 32 4 0.83403 344 9 0.90201 479 10 0.92852 472 10 0.82180 222 10 0.823005 95 6 0.82553 324 10 0.84177 142 10 0.96738 72 7 0.89344 478 10 0.93707 342 9 0.86733 196 9 0.83419 433 10 0.92419 496 10 0.91322 542 10 0.91611 612 10 0.807328 348 10 0.7608476 384 9 0.634271 222 10 0.723684 34 1 0.730343 334 11 0.926963 622 10 0.86391 448 10 0.89369 503 10 0.87819 316 10 0.77858 489 10 0.90998 327 10 0.91527 0.85102 0.88800 0.93475 0.84548 0.90330 0.93189 0.91437 0.91349 0.93306 0.89461 0.90271 0.89153 0.90032 0.90033 0.86047 0.60284 0.87771 0.88190 0.92227 0.91311 0.91021 0.90879 0.91397 0.95017 0.91557 0.92040 0.91193 0.90655 0.94061 0.93727 0.92639 0.794465 7.5799e-01 0.6028010 0.668759 0.800405 0.922797 0.90442 0.93274 0.89871 0.87650 0.891278 8 0.89631 0.91831 -0.0198012 10 0.86667 0.77679 0.08987423 0.783060 2.4608e-02 weaklyHypometh 1 1.0000000 insignificant 0.751190 0.00592463 weaklyHypometh 1 1.00000 insignificant -0.0160133 0.490760 insignificant 1 insignificant 0.89641 0.814300 0.082882 10 0.88205 0.745443 0.1366082 4.4422e-05 0.98694 weaklyHypermeth 1.8509e-03 1 weaklyHypermeth 2.7233e-02 0.73673 weaklyHypermeth 9.0777e-01 1 insignificant 0.100500 5.4783e-02 insignificant 1.0000e+00 insignificant 0.89637 0.89966 0.0031301 10 0.86061 0.86359 -0.0029794 4.0964e-01 0.16551829 insignificant 1.00000000 1.00000 insignificant 0.2416411 0.34907996 insignificant 1.00000 1.00000 insignificant -0.00046259 0.98755009 insignificant 1.00000 insignificant 0.91875 0.814624 0.102568 10 0.87257 0.790069 0.0825038 7.0064e-06 0.98563 weaklyHypermeth 3.8925e-04 1 weaklyHypermeth 2.7723e-04 0.93625 weaklyHypermeth 1.9802e-02 1 weaklyHypermeth 0.116513 3.1959e-02 weaklyHypermeth 1.00000000 insignificant 0.91875 0.89966 0.02025695 10 0.87257 0.86359 0.0089874 3.9323e-02 4.0338e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 2.8035e-02 0.849621 weaklyHypermeth 1.00000000 1 insignificant 0.01555071 0.584774 insignificant 1 insignificant 0.814624 0.89966 -0.079924 10 0.790069 0.86359 -0.073516 0.89193 2.3696e-02 weaklyHypometh 1 7.6437e-01 insignificant 0.715627 4.7935e-02 weaklyHypometh 1 1.00000000 insignificant -0.100962 0.06091374 insignificant 1.000000 insignificant chr7 128339861 128340861 81631 KCP ENSG00000135253 0.93477 342 10 0.81011 365 10 0.81204 478 10 0.84631 248 10 0.83930 258 10 0.87464 548 10 0.86724 375 10 0.92633 286 10 0.88714 335 10 0.95187 342 10 0.89500 458 10 0.85201 188 10 0.90248 293 8 0.907835 174 7 0.84112 354 10 0.89600 132 8 0.57937 32 4 0.83403 344 9 0.90201 479 10 0.92852 472 10 0.82180 222 10 0.823005 95 6 0.82553 324 10 0.84177 142 10 0.96738 72 7 0.89344 478 10 0.93707 342 9 0.86733 196 9 0.83419 433 10 0.92419 496 10 0.91322 542 10 0.91611 612 10 0.807328 348 10 0.7608476 384 9 0.634271 222 10 0.723684 34 1 0.730343 334 11 0.926963 622 10 0.86391 448 10 0.89369 503 10 0.87819 316 10 0.77858 489 10 0.90998 327 10 0.91527 0.85102 0.88800 0.93475 0.84548 0.90330 0.93189 0.91437 0.91349 0.93306 0.89461 0.90271 0.89153 0.90032 0.90033 0.86047 0.60284 0.87771 0.88190 0.92227 0.91311 0.91021 0.90879 0.91397 0.95017 0.91557 0.92040 0.91193 0.90655 0.94061 0.93727 0.92639 0.794465 7.5799e-01 0.6028010 0.668759 0.800405 0.922797 0.90442 0.93274 0.89871 0.87650 0.891278 8 0.89631 0.91831 -0.0198012 10 0.86667 0.77679 0.08987423 0.783060 2.4608e-02 weaklyHypometh 1 1.0000000 insignificant 0.751190 0.00592463 weaklyHypometh 1 1.00000 insignificant -0.0160133 0.490760 insignificant 1 insignificant 0.89641 0.814300 0.082882 10 0.88205 0.745443 0.1366082 4.4422e-05 0.98694 weaklyHypermeth 1.8509e-03 1 weaklyHypermeth 2.7233e-02 0.73673 weaklyHypermeth 9.0777e-01 1 insignificant 0.100500 5.4783e-02 insignificant 1.0000e+00 insignificant 0.89637 0.89966 0.0031301 10 0.86061 0.86359 -0.0029794 4.0964e-01 0.16551829 insignificant 1.00000000 1.00000 insignificant 0.2416411 0.34907996 insignificant 1.00000 1.00000 insignificant -0.00046259 0.98755009 insignificant 1.00000 insignificant 0.91875 0.814624 0.102568 10 0.87257 0.790069 0.0825038 7.0064e-06 0.98563 weaklyHypermeth 3.8925e-04 1 weaklyHypermeth 2.7723e-04 0.93625 weaklyHypermeth 1.9802e-02 1 weaklyHypermeth 0.116513 3.1959e-02 weaklyHypermeth 1.00000000 insignificant 0.91875 0.89966 0.02025695 10 0.87257 0.86359 0.0089874 3.9323e-02 4.0338e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 2.8035e-02 0.849621 weaklyHypermeth 1.00000000 1 insignificant 0.01555071 0.584774 insignificant 1 insignificant 0.814624 0.89966 -0.079924 10 0.790069 0.86359 -0.073516 0.89193 2.3696e-02 weaklyHypometh 1 7.6437e-01 insignificant 0.715627 4.7935e-02 weaklyHypometh 1 1.00000000 insignificant -0.100962 0.06091374 insignificant 1.000000 insignificant chr7 128904574 128905574 81657 FAM40B ENSG00000128578 0.55800 81 5 0.60141 97 5 0.44667 23 3 0.64000 68 5 0.72429 35 3 0.80098 61 4 0.60909 47 5 0.69394 41 4 0.57333 31 3 0.76667 20 3 0.58655 97 5 0.73333 14 1 0.72311 55 5 0.700000 26 3 0.72000 25 5 0.86667 11 1 0.52381 21 1 0.68793 82 4 0.79683 34 4 0.56508 41 4 0.83667 23 3 1.000000 2 0 0.66889 38 4 0.70667 23 4 0.60328 47 5 0.59000 71 4 0.56000 24 4 0.37500 10 0 0.70062 57 5 0.78935 59 4 0.74670 58 4 0.76898 53 4 0.641444 59 5 0.6566667 40 2 0.615049 68 5 0.500000 20 2 0.666200 52 4 0.631489 68 4 0.78444 52 5 0.69320 56 5 0.68399 90 5 0.84444 33 3 0.67879 63 4 0.57995 0.62086 0.45556 0.65595 0.71190 0.79984 0.61869 0.70328 0.61667 0.73333 0.61281 0.77778 0.73201 0.72222 0.73333 0.82369 NA 0.69903 0.79365 0.58201 0.80972 0.78913 0.67407 0.72222 0.61637 0.61667 0.58333 0.42866 0.70128 0.79946 0.75068 0.76994 0.652184 6.7500e-01 0.6243668 0.509293 0.677988 0.636583 0.79722 0.69150 0.64636 0.84028 0.667929 0 0.66447 0.71828 -0.0356749 4 0.65157 0.69709 -0.04552483 0.919131 1.0962e-01 lowCoverage 1 1.0000000 lowCoverage 0.758530 0.35238594 lowCoverage 1 1.00000 lowCoverage -0.0296289 0.570236 lowCoverage 1 lowCoverage 0.66447 0.661238 0.033170 4 0.65157 0.635500 0.0160663 1.8541e-02 0.62582 lowCoverage 4.6351e-01 1 lowCoverage 6.7991e-03 0.86228 lowCoverage 3.2377e-01 1 lowCoverage 0.047409 1.8819e-01 lowCoverage 1.0000e+00 lowCoverage 0.66484 0.71769 -0.0341565 5 0.70964 0.74658 -0.0369367 9.7673e-01 0.18864798 insignificant 1.00000000 1.00000 insignificant 0.9781664 0.15812886 insignificant 1.00000 1.00000 insignificant -0.07109029 0.11629339 lowCoverage 1.00000 lowCoverage 0.71828 0.661238 0.066950 4 0.69709 0.635500 0.0615911 1.9109e-02 0.96744 lowCoverage 5.1645e-01 1 lowCoverage 3.6150e-02 0.99382 lowCoverage 1.0000e+00 1 lowCoverage 0.077038 1.5599e-01 lowCoverage 1.00000000 lowCoverage 0.71828 0.71672 -0.00060045 4 0.69709 0.69589 0.0012008 6.2243e-01 4.3457e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.3242e-01 0.313113 lowCoverage 1.00000000 1 lowCoverage -0.04146139 0.471781 lowCoverage 1 lowCoverage 0.661238 0.71672 -0.060787 4 0.635500 0.69589 -0.060390 0.87458 2.0986e-03 lowCoverage 1 9.9932e-02 lowCoverage 0.982997 1.3240e-02 lowCoverage 1 0.66202380 lowCoverage -0.118499 0.02159622 lowCoverage 1.000000 lowCoverage chr7 129799952 129800952 81714 CPA5 ENSG00000158525 0.52903 83 3 0.35530 69 5 0.35824 122 5 0.47632 67 3 0.49590 83 5 0.66435 145 3 0.40875 85 5 0.37045 125 5 0.44286 45 5 0.65344 22 3 0.60204 157 5 0.25347 50 5 0.23405 78 3 0.401263 49 3 0.29331 99 5 0.21250 20 3 0.00000 5 0 0.34229 98 4 0.47276 137 3 0.65894 87 3 0.27820 104 6 0.067434 53 3 0.73968 67 5 0.27606 32 3 0.64249 51 4 0.22201 212 5 0.33693 150 5 0.43751 49 4 0.53946 133 3 0.19812 221 5 0.34953 224 5 0.57147 127 3 0.012766 175 5 0.0000000 60 5 0.000000 93 4 0.000000 4 0 0.102257 169 6 0.025323 292 5 0.32352 92 3 0.10702 60 3 0.27867 73 4 0.50500 37 2 0.25560 116 4 0.55670 0.20956 0.51447 0.63536 0.51548 0.78936 0.55599 0.66664 0.53460 0.66605 0.75326 0.44673 0.39393 0.37279 0.46745 0.35547 NA 0.28886 0.63929 0.59771 0.61339 0.14598 0.62076 0.41887 0.72533 0.48406 0.54799 0.54562 0.57993 0.40872 0.41702 0.59284 0.024934 0.0000e+00 0.0019231 0.017674 0.074261 0.050912 0.39484 0.17179 0.53192 0.21680 0.373106 2 0.52645 0.43570 0.0750315 3 0.37474 0.27124 0.10350224 0.040377 9.9999e-01 lowCoverage 1 1.0000000 lowCoverage 0.628616 0.98011260 lowCoverage 1 1.00000 lowCoverage 0.0230229 0.742518 lowCoverage 1 lowCoverage 0.52511 0.035443 0.488114 3 0.37466 0.020923 0.3537403 4.9307e-18 1.00000 lowCoverage 7.0439e-16 1 lowCoverage 2.5837e-08 1.00000 lowCoverage 3.6910e-06 1 lowCoverage 0.387872 1.7730e-09 lowCoverage 5.7015e-07 lowCoverage 0.52677 0.34127 0.1840603 3 0.42158 0.25371 0.1678733 1.8727e-04 0.99993894 lowCoverage 0.04681849 1.00000 lowCoverage 0.0049802 0.99863665 lowCoverage 0.91560 1.00000 lowCoverage 0.11730180 0.15817929 lowCoverage 1.00000 lowCoverage 0.43583 0.035443 0.402146 5 0.27730 0.020923 0.2563802 3.0514e-12 1.00000 hypermethylated 3.0514e-10 1 hypermethylated 1.2865e-07 1.00000 hypermethylated 2.1441e-05 1 hypermethylated 0.364849 4.5098e-05 lowCoverage 0.00901954 lowCoverage 0.43601 0.34127 0.11290190 3 0.30514 0.25371 0.0514333 4.6104e-02 9.8914e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.0078e-02 0.971757 lowCoverage 1.00000000 1 lowCoverage 0.09427889 0.299028 lowCoverage 1 lowCoverage 0.035443 0.33867 -0.298735 3 0.020923 0.19471 -0.173790 1.00000 4.2697e-06 lowCoverage 1 3.5581e-04 lowCoverage 1.000000 3.3241e-04 lowCoverage 1 0.03324083 lowCoverage -0.270570 0.01161975 lowCoverage 0.889320 lowCoverage chr7 130916341 130917341 81761 PODXL ENSG00000128567 0.72901 205 6 0.72510 245 9 0.72818 308 9 0.71164 251 6 0.80202 157 8 0.84643 348 8 0.75317 201 8 0.77049 218 8 0.77389 276 8 0.81975 183 9 0.77523 304 9 0.75741 144 8 0.61853 279 9 0.664558 69 4 0.74486 217 9 0.81486 122 9 0.68801 92 7 0.54842 221 6 0.79766 273 9 0.74735 223 6 0.76467 91 8 0.739152 129 6 0.74015 190 7 0.81891 120 7 0.69503 92 6 0.77415 307 9 0.52590 112 7 0.62549 115 6 0.69654 275 8 0.81526 376 9 0.79917 314 8 0.75550 334 8 0.249944 302 9 0.5368386 158 9 0.487714 119 4 0.242552 50 4 0.408904 200 7 0.230712 262 9 0.77195 194 7 0.64291 196 7 0.69271 185 6 0.82662 199 6 0.70823 226 6 0.73260 0.61851 0.71372 0.78553 0.70193 0.87681 0.73792 0.74365 0.70431 0.77825 0.72174 0.67716 0.55142 0.68077 0.69986 0.78104 0.60069 0.55879 0.78892 0.74944 0.73302 0.57973 0.77121 0.80386 0.69851 0.71590 0.54553 0.62488 0.70274 0.76302 0.79863 0.78091 0.279295 5.8507e-01 0.6103280 0.219339 0.473346 0.262364 0.64757 0.64471 0.73132 0.73099 0.559637 5 0.72757 0.74134 -0.0097506 8 0.75667 0.75586 0.00081027 0.482925 3.0413e-01 insignificant 1 1.0000000 insignificant 0.445289 0.47572609 insignificant 1 1.00000 insignificant 0.0116669 0.693017 insignificant 1 insignificant 0.72757 0.367553 0.352341 8 0.75667 0.354773 0.4018926 7.3879e-40 1.00000 hypermethylated 3.6940e-37 1 hypermethylated 2.8430e-13 1.00000 hypermethylated 7.1075e-11 1 hypermethylated 0.381384 6.5018e-04 hypermethylated 6.5018e-02 hypermethylated 0.72757 0.66200 0.0561449 6 0.75667 0.70750 0.0491663 5.3824e-03 0.90743979 weaklyHypermeth 0.76891841 1.00000 insignificant 0.1528083 0.33216734 insignificant 1.00000 1.00000 insignificant 0.01234487 0.74139822 insignificant 1.00000 insignificant 0.74134 0.367553 0.369359 8 0.75586 0.354773 0.4010823 5.0704e-29 1.00000 hypermethylated 1.9351e-26 1 hypermethylated 2.8747e-10 1.00000 hypermethylated 5.7494e-08 1 hypermethylated 0.369717 4.9424e-04 hypermethylated 0.05191826 hypermethylated 0.74134 0.66200 0.06791264 6 0.75586 0.70750 0.0483560 5.9061e-03 9.2043e-01 weaklyHypermeth 4.9218e-01 1.000000 insignificant 3.1018e-01 0.517913 insignificant 1.00000000 1 insignificant 0.00067792 0.986949 insignificant 1 insignificant 0.367553 0.66200 -0.273895 6 0.354773 0.70750 -0.352726 1.00000 8.1896e-12 hypomethylated 1 1.6379e-09 hypomethylated 1.000000 2.1141e-07 hypomethylated 1 0.00010570 hypomethylated -0.369039 0.00046863 hypomethylated 0.093725 hypomethylated chr7 130916482 130917482 81762 PODXL ENSG00000128567 0.72901 205 6 0.72510 245 9 0.72818 308 9 0.71164 251 6 0.80202 157 8 0.84643 348 8 0.75317 201 8 0.77049 218 8 0.77389 276 8 0.81975 183 9 0.77523 304 9 0.75741 144 8 0.61853 279 9 0.664558 69 4 0.74486 217 9 0.81486 122 9 0.68801 92 7 0.54842 221 6 0.79766 273 9 0.74735 223 6 0.76467 91 8 0.739152 129 6 0.74015 190 7 0.81891 120 7 0.69503 92 6 0.77415 307 9 0.52590 112 7 0.62549 115 6 0.69654 275 8 0.81526 376 9 0.79917 314 8 0.75550 334 8 0.249944 302 9 0.5368386 158 9 0.487714 119 4 0.242552 50 4 0.408904 200 7 0.230712 262 9 0.77195 194 7 0.64291 196 7 0.69271 185 6 0.82662 199 6 0.70823 226 6 0.73260 0.61851 0.71372 0.78553 0.70193 0.87681 0.73792 0.74365 0.70431 0.77825 0.72174 0.67716 0.55142 0.68077 0.69986 0.78104 0.60069 0.55879 0.78892 0.74944 0.73302 0.57973 0.77121 0.80386 0.69851 0.71590 0.54553 0.62488 0.70274 0.76302 0.79863 0.78091 0.279295 5.8507e-01 0.6103280 0.219339 0.473346 0.262364 0.64757 0.64471 0.73132 0.73099 0.559637 5 0.72757 0.74134 -0.0097506 8 0.75667 0.75586 0.00081027 0.482925 3.0413e-01 insignificant 1 1.0000000 insignificant 0.445289 0.47572609 insignificant 1 1.00000 insignificant 0.0116669 0.693017 insignificant 1 insignificant 0.72757 0.367553 0.352341 8 0.75667 0.354773 0.4018926 7.3879e-40 1.00000 hypermethylated 3.6940e-37 1 hypermethylated 2.8430e-13 1.00000 hypermethylated 7.1075e-11 1 hypermethylated 0.381384 6.5018e-04 hypermethylated 6.5018e-02 hypermethylated 0.72757 0.66200 0.0561449 6 0.75667 0.70750 0.0491663 5.3824e-03 0.90743979 weaklyHypermeth 0.76891841 1.00000 insignificant 0.1528083 0.33216734 insignificant 1.00000 1.00000 insignificant 0.01234487 0.74139822 insignificant 1.00000 insignificant 0.74134 0.367553 0.369359 8 0.75586 0.354773 0.4010823 5.0704e-29 1.00000 hypermethylated 1.9351e-26 1 hypermethylated 2.8747e-10 1.00000 hypermethylated 5.7494e-08 1 hypermethylated 0.369717 4.9424e-04 hypermethylated 0.05191826 hypermethylated 0.74134 0.66200 0.06791264 6 0.75586 0.70750 0.0483560 5.9061e-03 9.2043e-01 weaklyHypermeth 4.9218e-01 1.000000 insignificant 3.1018e-01 0.517913 insignificant 1.00000000 1 insignificant 0.00067792 0.986949 insignificant 1 insignificant 0.367553 0.66200 -0.273895 6 0.354773 0.70750 -0.352726 1.00000 8.1896e-12 hypomethylated 1 1.6379e-09 hypomethylated 1.000000 2.1141e-07 hypomethylated 1 0.00010570 hypomethylated -0.369039 0.00046863 hypomethylated 0.093725 hypomethylated chr7 130958251 130959251 81763 PODXL ENSG00000128567 0.83017 396 9 0.79595 275 9 0.80089 202 7 0.84450 354 9 0.82451 139 8 0.81353 570 9 0.85537 242 9 0.75904 206 9 0.66386 210 9 0.90741 158 7 0.86023 392 9 0.51213 166 6 0.84678 244 6 0.694851 98 6 0.76402 213 7 0.53153 132 7 0.49427 118 6 0.70602 322 9 0.88058 189 9 0.87157 352 9 0.78795 132 7 0.664226 100 6 0.88025 240 9 0.81642 145 9 0.89561 176 7 0.82770 314 9 0.75230 130 8 0.90220 185 8 0.83019 216 9 0.81700 311 9 0.84522 264 9 0.92759 453 9 0.419911 300 9 0.4952981 210 9 0.000000 49 1 0.354529 181 9 0.712015 288 9 0.208357 417 9 0.83029 371 9 0.73907 401 9 0.65899 361 8 0.48869 308 6 0.71530 264 9 0.82613 0.73652 0.71158 0.83270 0.80619 0.77334 0.83610 0.69953 0.59623 0.84488 0.86737 0.58835 0.79312 0.62971 0.72281 0.62116 0.47364 0.64476 0.86885 0.81224 0.85221 0.69982 0.84253 0.77916 0.90656 0.81159 0.77619 0.89715 0.81271 0.80026 0.81344 0.90588 0.302623 2.8122e-01 NA 0.249018 0.646816 0.181043 0.81398 0.72109 0.61520 0.41402 0.659576 6 0.76974 0.83677 -0.0602966 9 0.79608 0.84151 -0.04542736 0.970813 8.2359e-04 weaklyHypometh 1 0.2745307 insignificant 0.989519 0.00028203 weaklyHypometh 1 0.28203 insignificant -0.0660270 0.068320 insignificant 1 insignificant 0.76974 0.350865 0.441293 9 0.79608 0.414725 0.3813543 1.4418e-31 1.00000 hypermethylated 4.8059e-29 1 hypermethylated 2.1828e-11 1.00000 hypermethylated 4.3655e-09 1 hypermethylated 0.397843 9.0889e-03 weaklyHypermeth 5.3464e-01 insignificant 0.76974 0.67097 0.1085332 9 0.79608 0.69153 0.1045474 6.5917e-05 0.99988697 weaklyHypermeth 0.02342499 1.00000 weaklyHypermeth 0.0044867 0.99989657 weaklyHypermeth 0.91560 1.00000 insignificant 0.07639124 0.27127570 insignificant 1.00000 insignificant 0.83677 0.350865 0.493465 9 0.84151 0.414725 0.4267816 5.8054e-29 1.00000 hypermethylated 1.9351e-26 1 hypermethylated 1.1005e-11 1.00000 hypermethylated 3.6682e-09 1 hypermethylated 0.463870 4.9457e-03 weaklyHypermeth 0.35371454 insignificant 0.83677 0.67097 0.16493563 9 0.84151 0.69153 0.1499748 1.9307e-09 9.9997e-01 weaklyHypermeth 9.6533e-07 1.000000 weaklyHypermeth 9.1339e-07 0.999991 weaklyHypermeth 0.00091339 1 weaklyHypermeth 0.14241827 0.063538 insignificant 1 insignificant 0.350865 0.67097 -0.337032 9 0.414725 0.69153 -0.276807 0.99961 1.3332e-07 hypomethylated 1 1.4813e-05 hypomethylated 0.999916 1.7107e-05 hypomethylated 1 0.00342134 hypomethylated -0.321451 0.02385492 weaklyHypometh 1.000000 insignificant chr7 131640492 131641492 81822 PLXNA4 ENSG00000221866 0.95041 230 5 0.91803 295 5 0.75478 200 5 0.81554 186 4 0.81901 174 4 0.85710 451 5 0.89402 198 5 0.91538 182 5 0.84216 129 5 0.90441 192 5 0.87220 212 5 0.64825 149 4 0.87770 227 5 0.840797 92 4 0.87936 242 5 0.76667 55 5 0.65000 16 2 0.93607 272 4 0.90630 342 5 0.94115 337 5 0.95513 87 4 0.857143 13 2 0.88217 194 5 0.84389 47 4 1.00000 2 0 0.88614 266 5 0.84911 121 4 0.76094 74 4 0.82145 296 5 0.91220 339 5 0.91788 351 5 0.96622 332 5 0.778681 193 5 0.7343750 284 5 0.819767 415 4 0.466667 14 2 0.688047 119 5 0.839450 342 5 0.83924 305 4 0.87345 280 4 0.85900 161 4 0.76537 225 4 0.83626 182 4 0.95254 0.91190 0.75317 0.83252 0.79362 0.83612 0.89764 0.88811 0.92826 0.90399 0.88540 0.84609 0.89947 0.82372 0.92712 0.86580 0.69313 0.89404 0.92814 0.94289 0.90754 0.82633 0.86053 0.86524 0.98483 0.92368 0.89487 0.90666 0.85532 0.92757 0.93895 0.94248 0.820254 7.9979e-01 0.9572626 0.651875 0.846312 0.740015 0.84828 0.79663 0.76273 0.66332 0.746219 2 0.89330 0.91894 -0.0268208 5 0.87070 0.90293 -0.03223696 0.996982 3.6085e-02 weaklyHypometh 1 1.0000000 insignificant 0.988524 0.11611761 insignificant 1 1.00000 insignificant -0.0382238 0.175201 lowCoverage 1 lowCoverage 0.89330 0.841142 0.039630 5 0.87070 0.786466 0.0842305 1.5163e-03 0.64950 weaklyHypermeth 5.2287e-02 1 weaklyHypermeth 3.4583e-02 0.75657 weaklyHypermeth 1.0000e+00 1 insignificant 0.128302 7.0644e-02 lowCoverage 1.0000e+00 lowCoverage 0.89330 0.80312 0.1003799 4 0.87070 0.83336 0.0373322 7.0275e-05 0.65630285 lowCoverage 0.02342499 1.00000 lowCoverage 0.0064092 0.50436341 lowCoverage 0.91560 1.00000 lowCoverage 0.01480259 0.59111282 lowCoverage 1.00000 lowCoverage 0.91894 0.841142 0.067242 5 0.90293 0.786466 0.1164674 8.9087e-04 0.90081 weaklyHypermeth 3.2995e-02 1 weaklyHypermeth 7.5912e-03 0.96249 weaklyHypermeth 3.4505e-01 1 insignificant 0.166526 2.8937e-02 lowCoverage 1.00000000 lowCoverage 0.91894 0.80312 0.12701201 4 0.90293 0.83336 0.0695691 7.7014e-06 9.3809e-01 lowCoverage 2.5671e-03 1.000000 lowCoverage 1.6023e-04 0.862275 lowCoverage 0.05341003 1 lowCoverage 0.05302643 0.071618 lowCoverage 1 lowCoverage 0.841142 0.80312 0.071126 4 0.786466 0.83336 -0.046898 0.07132 7.3499e-02 lowCoverage 1 1.0000e+00 lowCoverage 0.056415 1.7675e-01 lowCoverage 1 1.00000000 lowCoverage -0.113499 0.10078080 lowCoverage 1.000000 lowCoverage chr7 131791386 131792386 81842 PLXNA4 ENSG00000221866 0.81405 114 5 0.83826 92 5 0.56433 99 5 0.75517 110 5 0.69684 36 3 0.73849 206 5 0.84286 60 5 0.66667 82 5 0.60257 85 5 0.82419 47 1 0.81051 90 5 0.36500 30 2 0.77303 102 5 0.601099 76 5 0.58720 92 5 0.71429 37 1 0.43139 330 5 0.83235 103 5 0.76000 36 1 0.64988 179 5 1.00000 36 5 0.553333 69 5 0.91800 40 1 0.90278 50 5 0.71667 20 1 0.76393 125 5 0.64286 49 5 0.85000 32 2 0.81282 38 1 0.73405 100 5 0.80513 99 5 0.81617 164 5 0.488475 100 5 0.1428571 7 1 0.437500 134 5 1.000000 1 0 0.403439 146 5 0.738055 104 5 0.50383 122 5 0.56667 64 1 0.12800 85 1 0.33242 83 1 0.73333 62 1 0.79024 0.74208 0.60055 0.76154 0.66975 0.68027 0.76827 0.57824 0.62714 0.85250 0.75029 0.49618 0.76943 0.57951 0.63428 0.64095 0.71850 0.76925 0.78626 0.71735 1.00000 0.57701 0.88130 0.88921 0.64631 0.80032 0.65176 0.92176 0.75925 0.79413 0.74441 0.82794 0.325745 NA 0.2137405 NA 0.391484 0.533319 0.59100 0.61959 0.39084 0.31528 0.702290 1 0.74377 0.78467 -0.0522593 5 0.71465 0.78088 -0.06623258 0.988302 1.0096e-02 weaklyHypometh 1 1.0000000 insignificant 0.993118 0.00288474 weaklyHypometh 1 1.00000 insignificant -0.0995697 0.042350 lowCoverage 1 lowCoverage 0.74377 0.418699 0.326012 5 0.71465 0.483200 0.2314521 9.8742e-09 0.96885 hypermethylated 7.0530e-07 1 hypermethylated 1.4080e-02 0.93050 weaklyHypermeth 5.6321e-01 1 insignificant 0.158354 2.5457e-01 lowCoverage 1.0000e+00 lowCoverage 0.74377 0.55769 0.2100626 1 0.71465 0.46721 0.2474440 3.0083e-07 0.99999990 lowCoverage 0.00030083 1.00000 lowCoverage 0.0008194 0.99959712 lowCoverage 0.43813 1.00000 lowCoverage 0.24055869 0.07944235 lowCoverage 1.00000 lowCoverage 0.78467 0.418699 0.392786 5 0.78088 0.483200 0.2976847 9.6179e-10 0.99999 hypermethylated 8.0149e-08 1 hypermethylated 7.1700e-04 0.99999 hypermethylated 4.4812e-02 1 hypermethylated 0.257924 8.8021e-02 lowCoverage 1.00000000 lowCoverage 0.78467 0.55769 0.25911292 1 0.78088 0.46721 0.3136766 1.6332e-09 1.0000e+00 lowCoverage 9.6533e-07 1.000000 lowCoverage 1.7493e-05 0.999999 lowCoverage 0.00874651 1 lowCoverage 0.34012836 0.026821 lowCoverage 1 lowCoverage 0.418699 0.55769 -0.214475 1 0.483200 0.46721 0.015992 0.36808 1.4596e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.554605 6.8908e-01 lowCoverage 1 1.00000000 lowCoverage 0.082205 0.61835952 lowCoverage 1.000000 lowCoverage chr7 132062231 132063231 81873 ENSG00000183470 0.92213 320 6 0.86873 188 6 0.83402 80 6 0.89783 229 6 0.84167 43 2 0.92793 384 6 0.81732 63 5 0.90452 122 6 0.93651 47 5 0.77206 66 4 0.89613 215 6 0.64286 23 3 0.94171 125 6 0.952381 17 3 0.90555 88 6 1.00000 14 0 0.77778 8 0 0.92399 247 6 0.90917 141 6 0.83345 288 6 0.93742 81 6 0.949689 60 3 0.66229 153 6 0.82225 89 6 0.97238 47 3 0.89688 231 6 0.79595 119 6 1.00000 26 1 0.95581 159 6 0.93355 263 6 0.93825 193 6 0.90620 299 6 0.900778 159 6 0.7788366 132 6 1.000000 113 4 0.900000 14 1 0.774922 94 6 0.771569 249 6 0.94669 327 6 0.95272 303 6 0.89640 210 6 0.89710 157 6 0.90536 270 6 0.90527 0.87426 0.76885 0.87845 0.94310 0.93244 0.82881 0.90109 0.90777 0.90686 0.88443 0.89819 0.97273 0.90719 0.90144 1.00000 0.79477 0.91768 0.94151 0.94797 0.91675 0.94591 0.90369 0.76292 0.96245 0.90879 0.85716 1.00000 0.95724 0.94802 0.93288 0.90416 0.875291 8.5479e-01 0.9952003 0.833385 0.881837 0.738372 0.95259 0.95566 0.89886 0.87779 0.919778 0 0.90399 0.91221 -0.0085302 6 0.80441 0.76752 0.03689024 0.864586 6.9266e-01 insignificant 1 1.0000000 insignificant 0.862110 0.68460843 insignificant 1 1.00000 insignificant -0.0222681 0.503172 lowCoverage 1 lowCoverage 0.90432 0.847569 0.051917 6 0.91933 0.799925 0.1194001 1.3188e-02 0.96680 weaklyHypermeth 3.4704e-01 1 insignificant 1.9867e-01 0.95489 insignificant 1.0000e+00 1 insignificant 0.020936 6.3621e-01 lowCoverage 1.0000e+00 lowCoverage 0.90425 0.92660 -0.0197380 6 0.90588 0.92460 -0.0187163 8.9530e-01 0.11816916 insignificant 1.00000000 1.00000 insignificant 0.6616459 0.42707473 insignificant 1.00000 1.00000 insignificant -0.04436733 0.05590414 lowCoverage 1.00000 lowCoverage 0.91274 0.847569 0.061615 6 0.87716 0.799925 0.0772399 3.9364e-02 0.96167 weaklyHypermeth 8.9464e-01 1 insignificant 3.3203e-01 0.94923 insignificant 1.0000e+00 1 insignificant 0.043204 3.8057e-01 lowCoverage 1.00000000 lowCoverage 0.91317 0.92660 -0.01151197 6 0.91225 0.92460 -0.0123477 8.1104e-01 1.2593e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3608e-01 0.445671 insignificant 1.00000000 1 insignificant -0.02209922 0.472645 insignificant 1 insignificant 0.848485 0.92660 -0.070758 6 0.849913 0.92460 -0.074683 0.99850 4.1532e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.982324 2.2877e-01 insignificant 1 1.00000000 insignificant -0.065303 0.15690556 lowCoverage 1.000000 lowCoverage chr7 134612117 134613117 82102 STRA8 ENSG00000146857 0.93670 410 6 0.84454 271 6 0.84996 195 6 0.94913 322 6 0.82108 113 6 0.93779 465 6 0.89541 166 6 0.79215 213 6 0.873905 207 6 0.79344 220 6 0.89903 226 6 0.84702 107 6 0.90620 273 6 0.93244 113 6 0.85303 209 6 0.94786 120 6 0.78571 33 5 0.90691 431 6 0.91650 176 6 0.75194 349 6 0.878968 54 4 0.92072 108 4 0.929953 236 6 0.55150 74 3 0.81327 90 5 0.94159 272 6 0.66186 88 4 0.75047 101 4 0.89752 249 6 0.93938 231 6 0.91892 211 6 0.91256 345 6 0.67969 202 6 0.73888 116 6 0.42597 63 1 0.76389 44 3 0.62371 180 6 0.72647 274 6 0.92426 435 6 0.93753 338 6 0.90820 339 6 0.92260 366 6 0.94183 439 6 0.93818 0.82201 0.84892 0.93142 0.86013 0.93108 0.88630 0.87090 0.86478 0.90665 0.87476 0.80785 0.92689 0.88326 0.85020 0.89526 0.91144 0.88281 0.87990 0.90857 0.928435 0.88833 0.918824 0.90759 0.90461 0.93632 0.82460 0.94386 0.87885 0.92716 0.92252 0.94123 0.765234 0.61878 0.754625 0.63612 0.72332 0.74020 0.91476 0.94020 0.90146 0.91331 0.91167 4 0.89002 0.90821 -0.0205952 6 0.78448 0.82579 -0.0413117 0.7640414 0.0054448 weaklyHypometh 1 1.00000 insignificant 0.839574 0.0014125 weaklyHypometh 1 0.52843 insignificant 0.0289797 0.467292 insignificant 1 insignificant 0.89002 0.71445 0.1704875 6 0.78448 0.62936 0.1551192 3.0165e-13 9.9997e-01 weaklyHypermeth 3.7707e-11 1.0000000 weaklyHypermeth 1.9825e-04 7.8168e-01 weaklyHypermeth 9.4405e-03 1.000000 weaklyHypermeth 0.2122695 7.6342e-03 lowCoverage 0.2938727 lowCoverage 0.89084 0.92227 -0.0274863 6 0.90312 0.92835 -0.02523501 9.8896e-01 3.7135e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.7471e-01 5.5692e-02 insignificant 1.0000000 1.000000 insignificant -0.0548451 0.00110450 weaklyHypometh 0.13806 insignificant 0.90821 0.71445 0.191684 6 0.82579 0.62936 0.1964309 1.3113e-08 0.999923 weaklyHypermeth 1.0928e-06 1 weaklyHypermeth 3.1686e-04 0.999975 weaklyHypermeth 0.01584318 1 weaklyHypermeth 0.183290 1.4825e-02 lowCoverage 0.5929909 lowCoverage 0.91060 0.92227 -0.0068867 6 0.91587 0.92835 -0.01248074 5.1696e-01 0.59378481 insignificant 1.0000e+00 1.00000 insignificant 0.14219286 0.6073480 insignificant 1.00000 1 insignificant -0.0838247 0.0429012 weaklyHypometh 1.00000 insignificant 0.71739 0.92227 -0.198200 6 0.75581 0.92835 -0.172537 0.999467 9.5589e-07 weaklyHypometh 1 0.00013656 weaklyHypometh 0.9705148 1.6194e-03 weaklyHypometh 1 0.101209 insignificant -0.267115 0.0031874 lowCoverage 0.22767 lowCoverage chr7 140834116 140835116 82330 ENSG00000204990 0.75222 92 5 0.69500 86 5 0.62619 35 5 0.79913 87 5 0.73462 54 5 0.88526 68 5 0.59259 31 2 0.74135 80 5 0.752976 36 5 0.75238 24 3 0.70188 130 5 0.86667 26 3 0.75727 39 5 0.75505 41 5 0.71556 37 5 0.60000 15 2 0.66667 12 0 0.84786 97 4 0.71250 44 2 0.75000 51 5 0.500000 5 0 0.60000 11 0 0.586667 39 2 0.71032 29 3 0.65867 70 5 0.75190 71 5 0.65675 30 3 0.77778 12 0 0.67228 71 5 0.56994 54 5 0.80636 66 5 0.69510 61 5 0.69987 103 5 0.70889 50 4 0.57451 69 5 0.30000 10 0 0.72130 61 5 0.63077 38 2 0.79335 69 2 0.79600 74 5 0.72426 78 5 0.73391 55 2 0.73676 76 5 0.76249 0.69739 0.63131 0.80952 0.71785 0.90581 0.47927 0.74503 0.70549 0.75267 0.70596 0.88060 0.75498 0.70896 0.72670 0.61194 0.67689 0.86516 0.71922 0.69403 0.735151 0.61194 0.571144 0.76262 0.66010 0.76141 0.73294 0.72139 0.82429 0.67231 0.77126 0.71297 0.701384 0.73715 0.583406 0.30597 0.73710 0.63720 0.81544 0.80269 0.73335 0.73679 0.74146 0 0.71613 0.72062 0.0013500 5 0.80515 0.64748 0.1576679 0.2904301 0.8397974 insignificant 1 1.00000 insignificant 0.347629 0.8507152 insignificant 1 1.00000 insignificant 0.0697797 0.037939 lowCoverage 1 lowCoverage 0.71508 0.63142 0.0918753 5 0.72721 0.64416 0.0830501 1.6894e-04 9.9794e-01 weaklyHypermeth 4.6929e-03 1.0000000 weaklyHypermeth 4.2727e-04 9.9618e-01 weaklyHypermeth 1.8577e-02 1.000000 weaklyHypermeth 0.1293694 1.0645e-01 lowCoverage 1.0000000 lowCoverage 0.71508 0.71307 -0.0065775 5 0.72721 0.75070 -0.02349196 5.7721e-01 1.7021e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8631e-01 1.0396e-01 insignificant 1.0000000 1.000000 insignificant -0.0215979 0.37208346 lowCoverage 1.00000 lowCoverage 0.72692 0.63142 0.090845 5 0.73148 0.64416 0.0873150 3.3700e-04 0.996362 weaklyHypermeth 1.0286e-02 1 weaklyHypermeth 1.7773e-03 0.998025 weaklyHypermeth 0.06835728 1 weaklyHypermeth 0.059590 4.2627e-01 lowCoverage 1.0000000 lowCoverage 0.72692 0.71307 -0.0124685 5 0.73148 0.75070 -0.01922702 6.2246e-01 0.38232389 insignificant 1.0000e+00 1.00000 insignificant 0.42632081 0.1475827 insignificant 1.00000 1 insignificant -0.0913776 0.0088801 lowCoverage 1.00000 lowCoverage 0.63142 0.71307 -0.101200 5 0.64416 0.75070 -0.106542 0.957593 4.9033e-04 weaklyHypometh 1 0.01690796 weaklyHypometh 0.9900204 3.3905e-04 weaklyHypometh 1 0.042381 weaklyHypometh -0.150967 0.0690212 lowCoverage 1.00000 lowCoverage chr7 144821179 144822179 82449 ENSG00000214035 0.62044 333 10 0.55518 271 10 0.58240 181 10 0.69785 218 10 0.64751 100 10 0.61392 392 10 0.63303 125 7 0.62175 154 10 0.575334 144 10 0.59987 141 10 0.71698 297 10 0.69523 75 6 0.58368 139 10 0.35857 26 4 0.58087 167 10 0.42692 92 7 0.71572 57 6 0.64878 170 10 0.73125 285 10 0.61994 333 10 0.565372 139 10 0.68724 136 10 0.691868 202 10 0.55443 102 9 0.63333 83 10 0.69515 300 10 0.54809 162 10 0.67108 132 10 0.58628 195 10 0.69443 277 10 0.63846 296 10 0.65274 430 10 0.51020 153 10 0.61885 155 10 0.56647 279 10 0.77167 87 7 0.52204 173 10 0.72131 263 10 0.68515 314 10 0.70998 283 10 0.71588 264 10 0.61045 208 7 0.73749 285 10 0.66527 0.65568 0.58718 0.72879 0.67800 0.65888 0.66241 0.67648 0.56820 0.60025 0.73083 0.68729 0.58520 0.49277 0.63954 0.57833 0.71244 0.67320 0.65756 0.65401 0.594953 0.67349 0.712953 0.60661 0.69712 0.62730 0.56857 0.64435 0.66944 0.74330 0.66906 0.64313 0.526830 0.63716 0.580644 0.73545 0.56943 0.66727 0.71732 0.75097 0.68449 0.65789 0.75797 7 0.64459 0.65811 -0.0023793 10 0.65244 0.66310 -0.0106517 0.9269319 0.7797782 insignificant 1 1.00000 insignificant 0.957825 0.6860023 insignificant 1 1.00000 insignificant -0.0236121 0.376686 insignificant 1 insignificant 0.64459 0.61171 0.0470021 10 0.65244 0.67804 -0.0255982 2.3490e-02 9.8276e-01 weaklyHypermeth 5.1066e-01 1.0000000 insignificant 2.3293e-01 9.6533e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0071597 8.8645e-01 insignificant 1.0000000 insignificant 0.64472 0.70710 -0.0637020 10 0.63151 0.69269 -0.06117782 9.9627e-01 1.8543e-03 weaklyHypometh 1.0000e+00 0.231791 insignificant 9.6185e-01 1.4802e-03 weaklyHypometh 1.0000000 0.288769 insignificant -0.0805283 0.01995355 weaklyHypometh 1.00000 insignificant 0.65811 0.61171 0.048739 10 0.66310 0.67804 -0.0149466 1.2439e-02 0.988101 weaklyHypermeth 2.6466e-01 1 insignificant 9.1123e-02 0.972455 insignificant 1.00000000 1 insignificant 0.016452 7.3684e-01 insignificant 1.0000000 insignificant 0.65766 0.70710 -0.0564767 10 0.63536 0.69269 -0.05733064 9.9654e-01 0.00299559 weaklyHypometh 1.0000e+00 0.74890 insignificant 0.98698658 0.0058251 weaklyHypometh 1.00000 1 insignificant -0.0569162 0.0691189 insignificant 1.00000 insignificant 0.60995 0.70710 -0.103623 10 0.58146 0.69269 -0.111233 0.999065 6.0483e-06 weaklyHypometh 1 0.00060483 weaklyHypometh 0.9902072 6.9305e-04 weaklyHypometh 1 0.073747 weaklyHypometh -0.073369 0.1771171 insignificant 1.00000 insignificant chr7 146062533 146063533 82490 ENSG00000208304 0.85833 148 6 0.90889 68 6 0.89135 95 6 0.94556 146 7 0.93765 76 6 0.94929 101 6 0.81282 110 6 0.96720 109 6 0.896104 35 2 0.95833 32 2 0.88630 143 6 0.75833 51 5 0.92065 84 4 0.65943 46 2 0.83385 89 6 0.96154 37 2 1.00000 25 1 0.63327 101 6 0.77778 19 0 0.94815 48 6 0.966667 26 2 0.83333 5 0 0.822360 108 2 0.90000 18 2 0.82143 28 2 1.00000 21 0 0.95123 58 6 0.79286 18 1 0.72987 48 2 0.92063 39 6 0.90741 35 4 0.97454 81 4 0.75415 86 6 0.69354 76 6 0.83333 43 6 1.00000 4 0 0.73545 77 6 0.70879 66 6 0.91275 276 10 0.91484 266 8 0.83767 144 6 0.93203 88 3 0.94616 265 9 0.85612 0.83436 0.91054 0.84931 0.85617 0.91514 0.79657 0.94122 0.79125 0.92824 0.82534 0.80123 0.88399 0.76144 0.90218 0.91168 0.95904 0.74787 0.67284 0.96543 0.940741 0.83607 0.928663 0.82222 0.87972 1.00000 0.89290 0.87037 0.77475 0.78836 0.90123 0.97569 0.698808 0.69616 0.839506 0.86168 0.78255 0.75865 0.95517 0.91879 0.86723 0.89942 0.90582 0 0.88077 0.89691 -0.0195018 2 0.86910 0.89288 -0.0237805 0.4115257 0.0181580 lowCoverage 1 1.00000 lowCoverage 0.835079 0.0015853 lowCoverage 1 0.52843 lowCoverage -0.0097862 0.770554 lowCoverage 1 lowCoverage 0.87936 0.73295 0.1584615 6 0.90705 0.73773 0.1693213 1.8949e-08 9.9973e-01 weaklyHypermeth 8.6130e-07 1.0000000 weaklyHypermeth 7.4347e-03 9.8430e-01 weaklyHypermeth 2.2529e-01 1.000000 insignificant 0.0876976 1.3362e-01 lowCoverage 1.0000000 lowCoverage 0.88069 0.92012 -0.0335028 6 0.85521 0.90004 -0.04483201 7.4427e-01 1.7595e-01 insignificant 1.0000e+00 1.000000 insignificant 7.8391e-01 5.2012e-01 insignificant 1.0000000 1.000000 insignificant -0.0334483 0.27242283 lowCoverage 1.00000 lowCoverage 0.89937 0.73295 0.153308 2 0.91272 0.73773 0.1749969 1.7198e-06 0.994908 lowCoverage 7.8171e-05 1 lowCoverage 3.8376e-04 0.986419 lowCoverage 0.01827411 1 lowCoverage 0.097484 1.0330e-01 lowCoverage 1.0000000 lowCoverage 0.89648 0.92004 -0.0173282 2 0.88314 0.89095 -0.00781373 2.8383e-01 0.46490103 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.07458577 0.9104562 lowCoverage 1.00000 1 lowCoverage -0.0236621 0.4527945 lowCoverage 1.00000 lowCoverage 0.73295 0.92338 -0.194197 6 0.73773 0.91501 -0.177282 0.996109 6.5435e-04 weaklyHypometh 1 0.02110799 weaklyHypometh 0.9874032 2.7191e-02 weaklyHypometh 1 0.632343 insignificant -0.121146 0.0502961 insignificant 1.00000 insignificant chr7 148648765 148649765 82586 ZNF783 ENSG00000204946 0.15714 88 3 0.25842 173 5 0.29818 43 5 0.46692 85 4 0.16389 31 3 0.32758 310 5 0.22083 65 5 0.83162 96 5 0.083824 54 3 0.19526 61 3 0.39585 155 5 0.13333 15 3 0.87143 62 3 0.65741 33 3 0.52667 96 3 0.31481 54 3 NA 0 0 0.32429 134 3 0.89463 148 3 0.66215 174 3 0.058242 54 5 0.00000 15 3 0.041379 94 3 0.37000 26 4 0.64000 17 3 0.41587 213 5 0.10721 156 3 0.51905 18 3 0.57940 142 3 0.65834 205 5 0.73524 204 5 0.13968 201 5 0.13196 182 5 0.41646 130 3 0.16981 161 3 0.00000 30 3 0.24513 118 5 0.19625 217 5 0.33004 140 5 0.34932 183 5 0.48506 93 3 0.27968 140 3 0.27028 98 3 0.26557 0.25248 0.36830 0.39609 0.16684 0.40132 0.25881 0.76134 0.14055 0.32962 0.37446 0.13846 0.87198 0.66026 0.54655 0.32265 NA 0.32520 0.82506 0.43904 0.096224 0.00000 0.071618 0.45449 0.41282 0.37105 0.18083 0.52747 0.30041 0.65139 0.72121 0.12332 0.129628 0.36296 0.176343 0.00000 0.33654 0.25017 0.41942 0.32609 0.47657 0.27930 0.20073 2 0.42834 0.37175 0.0707349 3 0.42305 0.42606 -0.0030130 0.2634628 0.5393446 lowCoverage 1 1.00000 lowCoverage 0.149477 0.9295301 lowCoverage 1 1.00000 lowCoverage 0.0543295 0.587745 lowCoverage 1 lowCoverage 0.42834 0.21599 0.2111811 3 0.42305 0.19464 0.2284080 9.6467e-05 9.9998e-01 lowCoverage 2.8373e-03 1.0000000 lowCoverage 2.2904e-03 9.9784e-01 lowCoverage 7.8978e-02 1.000000 lowCoverage 0.2164271 1.7143e-02 lowCoverage 0.5911411 lowCoverage 0.42834 0.33639 0.0915033 3 0.42305 0.34229 0.08075889 1.1297e-01 9.7242e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.9216e-01 7.1016e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.0668213 0.35758200 lowCoverage 1.00000 lowCoverage 0.37175 0.21599 0.158140 5 0.42606 0.19464 0.2314210 9.0277e-04 0.999368 weaklyHypermeth 2.3757e-02 1 weaklyHypermeth 9.1731e-02 0.987618 insignificant 1.00000000 1 insignificant 0.162098 1.1306e-01 lowCoverage 1.0000000 lowCoverage 0.37175 0.33639 0.0191554 3 0.42606 0.34229 0.08377185 1.8972e-01 0.90362176 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.84597888 0.4909971 lowCoverage 1.00000 1 lowCoverage 0.0124918 0.8886770 lowCoverage 1.00000 lowCoverage 0.21599 0.33639 -0.117308 3 0.19464 0.34229 -0.147649 0.999534 8.7273e-04 lowCoverage 1 0.02493501 lowCoverage 0.9990316 9.5325e-03 lowCoverage 1 0.288865 lowCoverage -0.149606 0.0571218 lowCoverage 1.00000 lowCoverage chr7 148649247 148650247 82587 ENSG00000219420 0.15714 88 3 0.25842 173 5 0.29818 43 5 0.46692 85 4 0.16389 31 3 0.32758 310 5 0.22083 65 5 0.83162 96 5 0.083824 54 3 0.19526 61 3 0.39585 155 5 0.13333 15 3 0.87143 62 3 0.65741 33 3 0.52667 96 3 0.31481 54 3 NA 0 0 0.32429 134 3 0.89463 148 3 0.66215 174 3 0.058242 54 5 0.00000 15 3 0.041379 94 3 0.37000 26 4 0.64000 17 3 0.41587 213 5 0.10721 156 3 0.51905 18 3 0.57940 142 3 0.65834 205 5 0.73524 204 5 0.13968 201 5 0.13196 182 5 0.41646 130 3 0.16981 161 3 0.00000 30 3 0.24513 118 5 0.19625 217 5 0.33004 140 5 0.34932 183 5 0.48506 93 3 0.27968 140 3 0.27028 98 3 0.26557 0.25248 0.36830 0.39609 0.16684 0.40132 0.25881 0.76134 0.14055 0.32962 0.37446 0.13846 0.87198 0.66026 0.54655 0.32265 NA 0.32520 0.82506 0.43904 0.096224 0.00000 0.071618 0.45449 0.41282 0.37105 0.18083 0.52747 0.30041 0.65139 0.72121 0.12332 0.129628 0.36296 0.176343 0.00000 0.33654 0.25017 0.41942 0.32609 0.47657 0.27930 0.20073 2 0.42834 0.37175 0.0707349 3 0.42305 0.42606 -0.0030130 0.2634628 0.5393446 lowCoverage 1 1.00000 lowCoverage 0.149477 0.9295301 lowCoverage 1 1.00000 lowCoverage 0.0543295 0.587745 lowCoverage 1 lowCoverage 0.42834 0.21599 0.2111811 3 0.42305 0.19464 0.2284080 9.6467e-05 9.9998e-01 lowCoverage 2.8373e-03 1.0000000 lowCoverage 2.2904e-03 9.9784e-01 lowCoverage 7.8978e-02 1.000000 lowCoverage 0.2164271 1.7143e-02 lowCoverage 0.5911411 lowCoverage 0.42834 0.33639 0.0915033 3 0.42305 0.34229 0.08075889 1.1297e-01 9.7242e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.9216e-01 7.1016e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.0668213 0.35758200 lowCoverage 1.00000 lowCoverage 0.37175 0.21599 0.158140 5 0.42606 0.19464 0.2314210 9.0277e-04 0.999368 weaklyHypermeth 2.3757e-02 1 weaklyHypermeth 9.1731e-02 0.987618 insignificant 1.00000000 1 insignificant 0.162098 1.1306e-01 lowCoverage 1.0000000 lowCoverage 0.37175 0.33639 0.0191554 3 0.42606 0.34229 0.08377185 1.8972e-01 0.90362176 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.84597888 0.4909971 lowCoverage 1.00000 1 lowCoverage 0.0124918 0.8886770 lowCoverage 1.00000 lowCoverage 0.21599 0.33639 -0.117308 3 0.19464 0.34229 -0.147649 0.999534 8.7273e-04 lowCoverage 1 0.02493501 lowCoverage 0.9990316 9.5325e-03 lowCoverage 1 0.288865 lowCoverage -0.149606 0.0571218 lowCoverage 1.00000 lowCoverage chr7 150298977 150299977 82609 KCNH2 ENSG00000055118 0.83887 172 7 0.65713 174 6 0.80566 218 8 0.84091 46 2 0.75841 119 8 0.89823 234 7 0.82063 84 7 0.64426 150 8 0.771500 124 6 0.91194 133 8 0.86831 221 8 0.86348 75 4 0.59867 101 7 0.56667 105 4 0.73048 112 6 0.73197 86 6 0.30769 15 1 0.56402 126 4 0.73852 208 7 0.80764 149 5 0.579114 85 6 0.49018 75 5 0.785567 94 8 0.68718 130 6 0.80101 143 7 0.79739 169 8 0.57128 161 7 0.67303 114 5 0.70429 146 7 0.72334 191 6 0.77903 200 6 0.86163 242 7 0.32776 140 7 0.30426 84 5 0.14844 147 3 0.42460 129 6 0.35391 138 6 0.42916 193 6 0.26346 138 4 0.56651 144 7 0.40138 117 4 0.45499 136 4 0.45404 107 5 0.77950 0.74833 0.72595 0.79471 0.82817 0.84851 0.80342 0.63410 0.80238 0.88659 0.88157 0.69935 0.57335 0.67766 0.67230 0.62172 0.66722 0.52033 0.64267 0.66514 0.870962 0.20480 0.668088 0.66412 0.74944 0.64534 0.56048 0.86806 0.70220 0.56512 0.47676 0.91856 0.066994 0.08258 0.020604 0.17566 0.17698 0.11035 0.26621 0.37435 0.44760 0.32101 0.32625 2 0.75038 0.73943 0.0432264 8 0.77950 0.61513 0.1643742 0.2830205 0.9456051 insignificant 1 1.00000 insignificant 0.179170 0.9937482 insignificant 1 1.00000 insignificant 0.0318277 0.492965 insignificant 1 insignificant 0.75038 0.26354 0.5474470 8 0.77950 0.29094 0.4885578 7.5981e-30 1.0000e+00 hypermethylated 7.5981e-27 1.0000000 hypermethylated 8.4651e-10 1.0000e+00 hypermethylated 8.4651e-07 1.000000 hypermethylated 0.4048942 7.1115e-06 hypermethylated 0.0023705 hypermethylated 0.75076 0.32866 0.3845524 4 0.81056 0.54949 0.26106132 2.6517e-16 9.9993e-01 lowCoverage 2.6517e-13 1.000000 lowCoverage 2.2783e-06 9.9810e-01 lowCoverage 0.0011392 1.000000 lowCoverage 0.3081720 0.00080709 lowCoverage 0.11530 lowCoverage 0.73943 0.26354 0.479960 8 0.61513 0.29094 0.3241836 1.1125e-19 0.998088 hypermethylated 5.5626e-17 1 hypermethylated 8.9398e-07 0.999747 hypermethylated 0.00089398 1 hypermethylated 0.373066 2.2662e-05 hypermethylated 0.0065049 hypermethylated 0.74112 0.32866 0.3199054 4 0.68347 0.54949 0.13397884 7.4789e-11 0.99987448 lowCoverage 7.4789e-08 1.00000 lowCoverage 0.00006746 0.9812583 lowCoverage 0.06746 1 lowCoverage 0.2763443 0.0017406 lowCoverage 0.87029 lowCoverage 0.26329 0.32866 -0.247624 4 0.28623 0.54949 -0.263262 0.975772 2.2291e-05 lowCoverage 1 0.00153761 lowCoverage 0.9582206 4.4975e-03 lowCoverage 1 0.155088 lowCoverage -0.096722 0.1714703 lowCoverage 1.00000 lowCoverage chr7 150456815 150457815 82613 AGAP3 ENSG00000133612 0.89546 142 5 0.86886 69 5 0.94551 76 5 0.85143 157 5 0.88778 42 5 0.85472 114 5 0.93604 54 5 0.89087 52 5 0.793912 90 5 0.89107 92 5 0.85256 122 5 0.57778 17 1 0.82777 117 5 0.83143 39 4 0.89391 103 5 0.93737 41 4 0.87000 21 1 0.84486 223 5 0.86052 70 5 0.93202 119 5 0.884615 51 5 0.76945 64 5 0.951905 104 5 0.66667 23 1 0.94476 69 5 0.91520 87 5 0.95238 64 5 0.97143 29 5 0.89366 79 5 0.90950 69 5 0.93976 91 5 0.92236 133 5 0.77833 62 5 0.78405 66 5 1.00000 1 0 0.94286 24 3 0.87857 44 5 0.89137 84 5 0.84736 104 5 0.95139 145 5 0.89091 124 5 0.89317 155 5 0.89899 152 5 0.89437 0.86336 0.94474 0.85920 0.89329 0.86074 0.93749 0.88817 0.78857 0.88743 0.84949 0.59644 0.82620 0.81269 0.88845 0.94376 0.85480 0.84238 0.86365 0.93278 0.860000 0.76780 0.950076 0.73199 0.94255 0.91554 0.95381 0.96457 0.89633 0.90167 0.93635 0.91481 0.783800 0.78071 NA 0.92914 0.87586 0.88651 0.84887 0.95347 0.89195 0.89861 0.89778 3 0.86989 0.91309 -0.0424539 5 0.87152 0.91714 -0.0456220 0.9991280 0.0012928 weaklyHypometh 1 0.43093 insignificant 0.998988 0.0040304 weaklyHypometh 1 1.00000 insignificant -0.0312802 0.323583 lowCoverage 1 lowCoverage 0.86989 0.81851 0.0567021 5 0.87152 0.84738 0.0241426 2.8877e-04 1.4691e-02 weaklyHypermeth 7.4273e-03 1.0000000 weaklyHypermeth 5.0622e-02 1.7066e-02 inconclusive 1.0000e+00 1.000000 insignificant -0.0170017 6.7998e-01 lowCoverage 1.0000000 lowCoverage 0.86989 0.89853 -0.0307187 5 0.87152 0.89976 -0.02824328 9.2316e-01 1.1112e-01 insignificant 1.0000e+00 1.000000 insignificant 7.9026e-01 2.6842e-01 insignificant 1.0000000 1.000000 insignificant -0.0341703 0.17698462 lowCoverage 1.00000 lowCoverage 0.91309 0.81851 0.092824 5 0.91714 0.84738 0.0697646 2.5684e-03 0.205666 weaklyHypermeth 5.9731e-02 1 weaklyHypermeth 4.4454e-02 0.156520 weaklyHypermeth 1.00000000 1 insignificant 0.014278 7.5111e-01 lowCoverage 1.0000000 lowCoverage 0.91309 0.89853 0.0115497 5 0.91714 0.89976 0.01737869 2.7683e-01 0.83729696 insignificant 1.0000e+00 1.00000 insignificant 0.13804402 0.8541082 insignificant 1.00000 1 insignificant -0.0028901 0.9256310 lowCoverage 1.00000 lowCoverage 0.81851 0.89853 -0.084018 5 0.84738 0.89976 -0.052386 0.603567 3.3064e-02 weaklyHypometh 1 0.71877250 insignificant 0.3986722 7.6230e-02 insignificant 1 1.000000 insignificant -0.017169 0.6750712 lowCoverage 1.00000 lowCoverage chr7 151855474 151856474 82633 CCT8L1 ENSG00000020219 0.97121 278 5 0.80017 341 5 0.89655 184 5 0.93259 253 5 0.89856 128 5 0.92752 412 5 0.88571 140 5 0.91664 250 5 0.894493 227 5 0.95649 230 5 0.89715 351 5 0.92749 139 5 0.93392 302 5 0.96317 244 5 0.94954 297 5 0.87388 120 5 0.80000 23 1 0.90537 392 5 0.95103 225 5 0.96637 245 5 0.955556 51 5 0.96905 122 5 0.930447 144 5 0.87248 67 5 0.94848 59 5 0.94081 402 5 0.90484 195 5 0.85111 83 5 0.82401 115 5 0.95125 348 5 0.93912 279 5 0.95567 205 5 0.89388 190 5 0.70476 32 5 0.97930 191 5 0.96000 26 4 0.91119 138 5 0.92231 309 5 0.94556 221 5 0.93914 164 5 0.94413 213 5 0.97925 241 5 0.96571 137 5 0.97099 0.80091 0.89614 0.93231 0.89978 0.92711 0.88673 0.91538 0.89267 0.95628 0.89723 0.92877 0.93441 0.96335 0.94945 0.87722 0.80363 0.90516 0.95072 0.96724 0.955996 0.96790 0.929144 0.87379 0.94967 0.94032 0.90575 0.85497 0.82452 0.95053 0.94016 0.95426 0.894291 0.70619 0.978854 0.95974 0.91186 0.92196 0.94379 0.93931 0.94329 0.97912 0.96522 5 0.91843 0.92995 -0.0112796 5 0.91802 0.92959 -0.0115683 0.9696840 0.2273819 insignificant 1 1.00000 insignificant 0.944777 0.2851334 insignificant 1 1.00000 insignificant -0.0078424 0.653279 lowCoverage 1 lowCoverage 0.91843 0.92099 -0.0024173 5 0.91802 0.92028 -0.0022598 7.7641e-01 2.6270e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.7447e-01 2.1202e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0171525 6.9525e-01 lowCoverage 1.0000000 lowCoverage 0.91843 0.95389 -0.0354042 5 0.91802 0.95463 -0.03661494 9.9472e-01 4.6424e-03 weaklyHypometh 1.0000e+00 0.515817 insignificant 9.8716e-01 1.2009e-03 weaklyHypometh 1.0000000 0.288769 insignificant -0.0423634 0.00438039 lowCoverage 0.31288 lowCoverage 0.92995 0.92099 0.008919 5 0.92959 0.92028 0.0093085 6.2020e-01 0.645431 insignificant 1.0000e+00 1 insignificant 6.6167e-01 0.697063 insignificant 1.00000000 1 insignificant 0.024995 5.7676e-01 lowCoverage 1.0000000 lowCoverage 0.92995 0.95389 -0.0234728 5 0.92959 0.95463 -0.02504666 9.5158e-01 0.09934826 insignificant 1.0000e+00 1.00000 insignificant 0.89251114 0.0706809 insignificant 1.00000 1 insignificant -0.0345210 0.0418319 weaklyHypometh 1.00000 insignificant 0.92099 0.95389 -0.032565 5 0.92028 0.95463 -0.034355 0.862049 7.5392e-02 insignificant 1 1.00000000 insignificant 0.7741077 5.8394e-02 insignificant 1 1.000000 insignificant -0.059516 0.2019459 lowCoverage 1.00000 lowCoverage chr7 152076542 152077542 82638 ENSG00000214003 0.94816 244 7 0.88371 171 6 0.90212 117 6 0.98134 156 7 0.99265 68 6 0.84970 295 7 0.91187 174 7 0.92775 110 7 0.960007 100 7 0.97222 54 5 0.94550 297 7 0.98611 72 7 0.94258 58 4 1.00000 16 1 0.94188 55 6 0.91667 47 6 0.96429 32 4 0.94648 93 6 0.94746 74 6 0.95035 266 7 0.930612 42 4 0.75926 36 3 0.960523 128 7 0.98571 76 6 0.87798 66 3 0.94516 140 6 0.85317 43 4 0.97143 24 2 0.94610 65 5 0.93476 172 7 0.96565 154 6 0.94009 261 6 0.82078 127 7 0.89078 97 6 1.00000 354 6 0.77143 47 6 0.86472 143 7 0.77641 124 5 0.94004 310 7 0.95083 267 6 0.95722 203 6 0.87407 97 5 0.94478 300 7 0.93347 0.86530 0.88242 0.97763 0.98010 0.91836 0.93852 0.90332 0.94672 0.96671 0.92500 0.95772 0.91332 0.96373 0.91621 0.92004 0.96863 0.92996 0.91798 0.94349 0.925420 0.95179 0.928270 0.96618 0.85714 0.94390 0.91891 0.98109 0.93565 0.93909 0.97412 0.93113 0.834953 0.86312 1.000000 0.62857 0.89683 0.71690 0.95267 0.96358 0.94641 0.87259 0.95856 2 0.93237 0.93621 -0.0047350 7 0.92259 0.93401 -0.0114209 0.7702862 0.2952138 insignificant 1 1.00000 insignificant 0.612663 0.3180330 insignificant 1 1.00000 insignificant 0.0210054 0.314610 lowCoverage 1 lowCoverage 0.93237 0.90247 0.0301243 7 0.92259 0.89086 0.0317321 9.9268e-02 6.7203e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2724e-02 9.2424e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0895237 5.0218e-02 insignificant 1.0000000 insignificant 0.93293 0.94308 -0.0104875 7 0.93539 0.93935 -0.00396028 5.5570e-01 3.3484e-01 insignificant 1.0000e+00 1.000000 insignificant 3.5762e-02 7.9882e-01 inconclusive 1.0000000 1.000000 insignificant 0.0101555 0.57567461 insignificant 1.00000 insignificant 0.93621 0.90247 0.038081 7 0.93401 0.89086 0.0431530 1.9801e-01 0.913866 insignificant 1.0000e+00 1 insignificant 1.2512e-01 0.978764 insignificant 1.00000000 1 insignificant 0.068518 1.2190e-01 lowCoverage 1.0000000 lowCoverage 0.93645 0.94308 -0.0076284 7 0.93896 0.93935 -0.00038735 7.2237e-01 0.60845583 insignificant 1.0000e+00 1.00000 insignificant 0.19514937 0.9696546 insignificant 1.00000 1 insignificant -0.0108500 0.6557890 lowCoverage 1.00000 lowCoverage 0.90315 0.94308 -0.040124 7 0.90729 0.93935 -0.032060 0.296739 2.9531e-01 insignificant 1 1.00000000 insignificant 0.4774730 3.5193e-01 insignificant 1 1.000000 insignificant -0.079368 0.0772990 insignificant 1.00000 insignificant chr7 155034585 155035585 82684 CNPY1 ENSG00000146910 0.93517 262 5 0.91903 156 5 0.87626 184 5 0.96934 167 5 0.92805 67 5 0.95518 349 5 0.93058 85 4 0.94729 136 5 0.858091 131 5 0.95158 138 5 0.92002 166 5 0.76462 45 4 0.93236 156 5 0.90909 11 1 0.91476 112 5 1.00000 34 3 0.83810 51 4 0.90687 217 5 0.85276 136 5 0.89994 206 5 0.951429 48 5 0.96313 88 5 0.897917 143 5 0.90508 88 5 0.92167 101 5 0.94524 224 5 0.76454 81 4 0.97182 60 5 0.93964 154 5 0.65484 210 5 0.89056 200 5 0.94574 292 5 0.78433 219 5 0.44380 107 5 0.44915 148 3 0.70378 73 4 0.83336 104 5 0.86994 198 5 0.89392 214 5 0.93524 251 5 0.92309 166 5 0.91735 220 5 0.96694 193 5 0.92286 0.88396 0.89115 0.96339 0.92413 0.94094 0.92598 0.92840 0.87475 0.96665 0.90161 0.83654 0.91958 NA 0.89309 1.00000 0.81151 0.90219 0.86461 0.90274 0.958929 0.94551 0.867236 0.87098 0.93129 0.93216 0.78653 0.95322 0.93107 0.92654 0.89988 0.94332 0.780557 0.43439 0.400773 0.68488 0.79333 0.84473 0.87901 0.90978 0.90543 0.90200 0.95598 3 0.91670 0.92116 -0.0044215 5 0.94225 0.80220 0.1400514 0.9724910 0.8541365 insignificant 1 1.00000 insignificant 0.941757 0.7708154 insignificant 1 1.00000 insignificant 0.0144877 0.629860 lowCoverage 1 lowCoverage 0.91667 0.67491 0.2287984 5 0.93263 0.74027 0.1923578 2.4177e-15 1.0000e+00 hypermethylated 3.4539e-13 1.0000000 hypermethylated 1.6646e-06 1.0000e+00 hypermethylated 2.3780e-04 1.000000 hypermethylated 0.2297263 3.0863e-02 lowCoverage 0.9644704 lowCoverage 0.91670 0.90805 0.0053735 5 0.94225 0.94016 0.00208829 6.8879e-01 8.3427e-01 insignificant 1.0000e+00 1.000000 insignificant 5.0948e-01 7.4055e-01 insignificant 1.0000000 1.000000 insignificant -0.0168519 0.33338731 lowCoverage 1.00000 lowCoverage 0.92171 0.67491 0.230877 5 0.93590 0.74027 0.1956311 7.1075e-10 1.000000 hypermethylated 7.8972e-08 1 hypermethylated 8.1031e-06 1.000000 hypermethylated 0.00135052 1 hypermethylated 0.215239 3.7983e-02 lowCoverage 1.0000000 lowCoverage 0.92116 0.90805 0.0091545 5 0.80220 0.94016 -0.13796312 6.2410e-01 0.93377428 insignificant 1.0000e+00 1.00000 insignificant 0.61286446 0.7462965 insignificant 1.00000 1 insignificant -0.0313396 0.3065410 lowCoverage 1.00000 lowCoverage 0.67491 0.90787 -0.246352 5 0.74027 0.93019 -0.189921 1.000000 1.0141e-05 hypomethylated 1 0.00092189 hypomethylated 1.0000000 3.9706e-05 hypomethylated 1 0.013235 hypomethylated -0.246578 0.0239592 lowCoverage 0.77288 lowCoverage chr7 156515513 156516513 82741 ENSG00000213992 0.84370 272 6 0.75828 62 5 0.65922 64 6 0.82237 102 6 0.86508 40 6 0.87141 204 6 0.69021 64 6 0.89683 34 4 0.801587 43 2 0.87837 57 6 0.70924 108 6 0.94815 37 4 0.81005 84 6 NA 0 0 0.87963 75 6 0.88248 64 6 0.94318 36 2 0.83250 110 6 0.75120 71 6 0.87186 137 6 0.625926 34 4 0.89749 49 6 0.828989 118 6 0.85833 25 2 0.93452 38 6 0.75494 78 6 0.84167 36 2 0.85714 16 2 0.88095 36 2 0.84137 111 6 0.82088 100 6 0.82618 207 6 0.65090 68 3 0.76472 72 6 0.83469 107 6 0.88818 76 6 0.76414 40 3 0.76430 98 6 0.82303 200 6 0.88235 218 6 0.88794 153 6 0.87043 209 6 0.85204 165 6 0.85514 0.79263 0.65573 0.88429 0.86774 0.87032 0.73931 0.87835 0.73844 0.86345 0.74337 0.95880 0.84968 NA 0.86821 0.89341 0.94028 0.82280 0.76356 0.87605 0.650041 0.90412 0.852332 0.84932 0.89051 0.77421 0.83942 0.84042 0.87226 0.86590 0.84132 0.83544 0.684224 0.74694 0.805519 0.87858 0.76322 0.79777 0.82634 0.88979 0.91304 0.90847 0.85509 2 0.82572 0.84080 -0.0137019 6 0.82184 0.82924 -0.0073975 0.5840732 0.3085511 insignificant 1 1.00000 insignificant 0.722121 0.4049240 insignificant 1 1.00000 insignificant -0.0035751 0.903902 lowCoverage 1 lowCoverage 0.82572 0.80043 0.0269019 6 0.82184 0.80343 0.0184178 5.8510e-02 8.1550e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2530e-02 9.9574e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0493013 2.2455e-01 insignificant 1.0000000 insignificant 0.82572 0.85608 -0.0380042 6 0.82184 0.85833 -0.03648844 9.7760e-01 1.3964e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4086e-01 2.2573e-01 insignificant 1.0000000 1.000000 insignificant -0.0360343 0.11795906 insignificant 1.00000 insignificant 0.84080 0.80043 0.040505 6 0.82924 0.80343 0.0258153 8.2490e-02 0.863980 insignificant 1.0000e+00 1 insignificant 4.7525e-02 0.990334 weaklyHypermeth 1.00000000 1 insignificant 0.052876 2.1308e-01 lowCoverage 1.0000000 lowCoverage 0.84080 0.85608 -0.0279047 6 0.82924 0.85833 -0.02909096 9.0144e-01 0.24299493 insignificant 1.0000e+00 1.00000 insignificant 0.61401395 0.3758748 insignificant 1.00000 1 insignificant -0.0324592 0.2219252 lowCoverage 1.00000 lowCoverage 0.80043 0.85608 -0.069032 6 0.80343 0.85833 -0.054906 0.958931 1.4015e-02 weaklyHypometh 1 0.31852436 insignificant 0.9957027 1.3302e-02 weaklyHypometh 1 0.380063 insignificant -0.085336 0.0477944 weaklyHypometh 1.00000 insignificant chr7 156598290 156599290 82747 ENSG00000213992 0.94686 96 5 0.85792 112 5 0.88261 98 5 0.86667 27 2 0.94128 64 5 0.85708 118 5 0.89723 128 5 0.95128 72 5 0.745000 68 5 0.92749 84 5 0.81625 149 5 0.88371 112 5 0.83150 81 5 NA 0 0 0.92424 106 5 0.93897 87 5 0.91462 86 5 0.80465 50 5 0.96264 129 5 0.90916 118 5 0.906667 56 5 0.96000 25 5 0.874999 102 5 0.75245 63 5 1.00000 6 0 0.94776 92 5 0.78795 55 5 0.87500 35 5 0.92455 78 5 0.94643 77 5 0.85495 79 5 0.93114 151 5 0.70441 97 5 0.78013 100 5 0.66250 124 5 0.86667 15 0 0.70594 74 5 0.76994 77 5 0.81814 108 5 0.95618 130 5 0.83056 47 5 0.93718 64 5 0.92500 32 3 0.94698 0.85778 0.88526 0.86914 0.94034 0.86031 0.89722 0.95252 0.74111 0.92710 0.81383 0.88368 0.83225 NA 0.92528 0.93671 0.91590 0.80724 0.96249 0.91020 0.910123 0.96000 0.874854 0.75991 0.97003 0.94757 0.78948 0.87778 0.92475 0.94444 0.85565 0.93216 0.703450 0.78067 0.664815 0.86667 0.70701 0.76813 0.81877 0.95687 0.83095 0.93656 0.92685 5 0.89412 0.89011 0.0038166 5 0.89410 0.88854 0.0055599 0.4960594 0.7102109 insignificant 1 1.00000 insignificant 0.915454 0.3502908 insignificant 1 1.00000 insignificant -0.0094996 0.704679 lowCoverage 1 lowCoverage 0.89412 0.72895 0.1667848 5 0.89410 0.72216 0.1719316 2.0431e-07 1.0000e+00 weaklyHypermeth 8.5129e-06 1.0000000 weaklyHypermeth 1.8244e-04 9.9950e-01 weaklyHypermeth 9.1222e-03 1.000000 weaklyHypermeth 0.1390594 3.5783e-03 lowCoverage 0.2236421 lowCoverage 0.89412 0.89239 0.0014312 5 0.89410 0.89478 -0.00068077 6.1159e-01 7.0493e-01 insignificant 1.0000e+00 1.000000 insignificant 6.0684e-01 7.8263e-01 insignificant 1.0000000 1.000000 insignificant -0.0060859 0.85396530 lowCoverage 1.00000 lowCoverage 0.89011 0.72895 0.164512 5 0.88854 0.72216 0.1663716 2.8640e-05 0.999621 weaklyHypermeth 1.1015e-03 1 weaklyHypermeth 4.9417e-04 0.999580 weaklyHypermeth 0.02059060 1 weaklyHypermeth 0.148559 2.1778e-03 lowCoverage 0.1451841 lowCoverage 0.89011 0.89239 -0.0059680 5 0.88854 0.89478 -0.00624070 7.3770e-01 0.64344172 insignificant 1.0000e+00 1.00000 insignificant 0.35705182 0.9214767 insignificant 1.00000 1 insignificant 0.0034138 0.9255178 lowCoverage 1.00000 lowCoverage 0.72895 0.89239 -0.165844 5 0.72216 0.89478 -0.172612 0.998395 3.4215e-03 weaklyHypometh 1 0.09004020 weaklyHypometh 0.9967063 2.0985e-03 weaklyHypometh 1 0.106986 insignificant -0.145145 0.0066700 lowCoverage 0.41687 lowCoverage chr7 157213510 157214510 82767 ENSG00000222012 0.77274 213 5 0.74523 127 5 0.71502 160 5 0.92608 191 5 0.83105 75 5 0.91646 250 5 0.66181 154 5 0.76539 107 5 0.858384 128 5 0.93153 115 5 0.87047 161 5 0.86834 128 5 0.52349 125 5 0.76667 30 2 0.74410 157 5 0.88609 146 5 0.89955 123 5 0.82348 241 5 0.88322 75 5 0.92652 207 5 0.625222 82 5 0.83579 53 3 0.838254 123 5 0.93737 70 5 0.63043 54 2 0.92297 128 5 0.62653 79 5 0.81250 72 5 0.56667 118 5 0.70232 155 5 0.86405 129 5 0.77789 264 5 0.43509 129 5 0.16457 101 5 0.33333 89 3 0.70000 48 5 0.63694 84 5 0.78154 121 5 0.81802 262 5 0.77128 267 5 0.86751 179 5 0.77838 239 5 0.86766 205 5 0.81494 0.76285 0.69326 0.89412 0.84697 0.91477 0.65983 0.78362 0.80871 0.89736 0.85983 0.86295 0.41411 0.78705 0.73761 0.88308 0.83902 0.80495 0.93517 0.90519 0.906424 0.78685 0.820162 0.89605 0.71217 0.92384 0.60867 0.89636 0.56421 0.64328 0.81217 0.78617 0.402537 0.17353 0.222923 0.66701 0.55616 0.78272 0.77605 0.76253 0.80255 0.71432 0.81426 5 0.81153 0.78448 0.0294688 5 0.86663 0.68142 0.1852081 0.1412370 0.5311770 insignificant 1 1.00000 insignificant 0.342320 0.7252746 insignificant 1 1.00000 insignificant 0.0541123 0.227868 lowCoverage 1 lowCoverage 0.81128 0.46154 0.3553050 5 0.81328 0.47437 0.3389137 1.5640e-12 1.0000e+00 hypermethylated 1.3429e-10 1.0000000 hypermethylated 2.9944e-06 9.9999e-01 hypermethylated 2.9944e-04 1.000000 hypermethylated 0.3072022 2.3722e-02 lowCoverage 0.7652275 lowCoverage 0.81128 0.76562 0.0298021 5 0.81328 0.80853 0.00475359 4.5617e-01 3.2113e-01 insignificant 1.0000e+00 1.000000 insignificant 1.4363e-01 1.8551e-01 insignificant 1.0000000 1.000000 insignificant -0.0047905 0.88040597 lowCoverage 1.00000 lowCoverage 0.78593 0.46154 0.329687 5 0.78732 0.47437 0.3129556 6.4052e-08 1.000000 hypermethylated 3.7677e-06 1 hypermethylated 1.4938e-04 0.999994 hypermethylated 0.01073238 1 hypermethylated 0.253090 4.7447e-02 lowCoverage 1.0000000 lowCoverage 0.78593 0.76562 -0.0023803 5 0.78732 0.80853 -0.02120443 5.8338e-01 0.40262652 insignificant 1.0000e+00 1.00000 insignificant 0.59490631 0.3759678 insignificant 1.00000 1 insignificant -0.0589028 0.1824124 lowCoverage 1.00000 lowCoverage 0.46154 0.76562 -0.330695 5 0.47437 0.80853 -0.334160 0.999999 3.7299e-05 hypomethylated 1 0.00219407 hypomethylated 0.9999943 2.8375e-04 hypomethylated 1 0.042381 hypomethylated -0.311993 0.0226382 lowCoverage 0.75461 lowCoverage chr7 157470420 157471420 82773 ENSG00000222012 0.94664 187 6 0.89670 93 5 0.58930 93 6 0.91561 193 5 0.97381 50 5 0.93478 271 6 0.88936 55 5 0.89992 150 6 0.848957 114 6 0.94848 133 6 0.92982 165 7 0.96263 36 2 0.94844 162 6 0.93551 61 6 0.79352 121 6 0.94286 24 2 0.93333 12 0 0.97579 164 5 0.92051 78 5 0.92368 181 5 0.991228 49 2 0.83824 92 5 0.823259 113 5 0.78540 57 5 0.97778 79 5 0.96220 105 6 0.70082 106 5 0.77011 102 6 0.72266 108 5 0.93620 88 5 0.93914 95 5 0.88535 182 5 0.56217 91 6 0.70926 75 5 0.81250 62 5 0.73704 25 2 0.62461 91 6 0.86524 83 5 0.90991 171 5 0.93766 150 5 0.98094 148 5 0.77587 140 5 0.94464 166 5 0.93663 0.87380 0.72152 0.89863 0.95211 0.92681 0.86000 0.92119 0.84413 0.94007 0.90024 0.93527 0.92905 0.94243 0.91494 0.93333 0.88667 0.97537 0.97426 0.90914 0.988772 0.84155 0.873034 0.92444 0.98444 0.94731 0.80117 0.89452 0.71894 0.92034 0.94666 0.84697 0.553873 0.72280 0.893119 0.63156 0.70213 0.83729 0.90808 0.92086 0.98604 0.93082 0.92011 2 0.91080 0.87755 0.0333876 5 0.89811 0.78752 0.1105920 0.0050709 0.9890679 weaklyHypermeth 1 1.00000 insignificant 0.050117 0.9920497 insignificant 1 1.00000 insignificant 0.0444491 0.219421 lowCoverage 1 lowCoverage 0.91080 0.71663 0.1940255 5 0.89811 0.69648 0.2016296 2.4628e-12 1.0000e+00 weaklyHypermeth 1.8944e-10 1.0000000 weaklyHypermeth 1.0094e-04 9.9996e-01 weaklyHypermeth 5.6078e-03 1.000000 weaklyHypermeth 0.1870127 7.6407e-03 lowCoverage 0.2938727 lowCoverage 0.91123 0.93032 -0.0190517 5 0.91143 0.90364 0.00779039 7.2704e-01 2.8637e-01 insignificant 1.0000e+00 1.000000 insignificant 7.4517e-01 4.9431e-01 insignificant 1.0000000 1.000000 insignificant -0.0043248 0.91754770 insignificant 1.00000 insignificant 0.87755 0.71663 0.157780 5 0.78752 0.69648 0.0910376 7.5117e-06 0.995264 weaklyHypermeth 3.1299e-04 1 weaklyHypermeth 3.7454e-03 0.993442 weaklyHypermeth 0.12915264 1 insignificant 0.142564 2.8128e-02 lowCoverage 0.9376039 lowCoverage 0.87969 0.93032 -0.0506495 5 0.87710 0.90364 -0.02653659 9.8305e-01 0.04559247 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.97098596 0.2031503 insignificant 1.00000 1 insignificant -0.0487739 0.3141792 lowCoverage 1.00000 lowCoverage 0.71868 0.93032 -0.215884 5 0.72923 0.90364 -0.174414 0.998919 6.9001e-05 hypomethylated 1 0.00345005 hypomethylated 0.9996096 4.3475e-03 weaklyHypometh 1 0.155088 insignificant -0.191337 0.0096878 lowCoverage 0.46132 lowCoverage chr7 158107913 158108913 82779 ENSG00000186921 0.95282 174 5 0.85647 52 5 0.95442 76 5 0.89234 106 5 0.91786 38 5 0.96254 235 5 0.95761 58 5 0.92250 39 5 0.897980 62 5 0.90704 89 5 0.93839 182 5 0.98824 58 5 0.85198 48 5 NA 0 0 0.92603 113 5 0.98333 24 1 0.93114 57 5 0.90710 92 5 0.96310 77 5 0.96083 204 5 0.920000 9 1 0.97500 29 5 0.943856 122 5 0.97500 46 5 1.00000 31 5 0.96667 35 5 0.95939 74 5 1.00000 14 1 0.84937 54 5 0.86211 97 5 0.93590 68 5 0.99048 308 5 1.00000 66 5 0.99286 92 5 1.00000 8 1 0.95714 41 5 0.94286 43 5 0.99048 76 5 0.98555 197 5 0.95694 259 5 0.96887 132 5 0.96137 232 5 0.92555 177 5 0.94775 0.86217 0.94814 0.90137 0.93594 0.95077 0.94780 0.92580 0.90821 0.89489 0.93230 0.97787 0.85705 NA 0.93042 0.96865 0.93254 0.91335 0.96205 0.96522 0.849541 0.95298 0.951431 0.95298 1.00000 0.97401 0.95833 1.00000 0.84125 0.87045 0.95001 0.98956 1.000000 0.98657 NA 0.95085 0.95544 0.98209 0.98506 0.95817 0.97060 0.96709 0.93754 1 0.93442 0.95039 -0.0157523 5 0.93615 0.95141 -0.0152640 0.9645869 0.0958946 insignificant 1 1.00000 insignificant 0.999200 0.0134371 weaklyHypometh 1 1.00000 insignificant -0.0180577 0.296870 lowCoverage 1 lowCoverage 0.93442 0.98160 -0.0475329 5 0.93615 0.98344 -0.0472957 9.9775e-01 3.2015e-05 weaklyHypometh 1.0000e+00 0.0064029 weaklyHypometh 9.9989e-01 5.1994e-05 weaklyHypometh 1.0000e+00 0.025997 weaklyHypometh -0.0504659 2.0679e-03 lowCoverage 0.1681862 lowCoverage 0.93442 0.96189 -0.0273423 5 0.93615 0.95959 -0.02344024 9.2281e-01 5.4064e-03 weaklyHypometh 1.0000e+00 0.540635 insignificant 9.4131e-01 9.8722e-03 weaklyHypometh 1.0000000 0.897469 insignificant -0.0295643 0.04580464 lowCoverage 1.00000 lowCoverage 0.95039 0.98160 -0.031482 5 0.95141 0.98344 -0.0320317 9.9166e-01 0.041788 weaklyHypometh 1.0000e+00 1 insignificant 9.8960e-01 0.044687 weaklyHypometh 1.00000000 1 insignificant -0.032408 8.2141e-02 lowCoverage 1.0000000 lowCoverage 0.95039 0.96189 -0.0111371 5 0.95141 0.95959 -0.00817621 7.8428e-01 0.46896739 insignificant 1.0000e+00 1.00000 insignificant 0.10833140 0.9269832 insignificant 1.00000 1 insignificant -0.0115066 0.5184263 lowCoverage 1.00000 lowCoverage 0.98160 0.96189 0.018954 5 0.98344 0.95959 0.023855 0.046663 9.6967e-01 weaklyHypermeth 1 1.00000000 insignificant 0.0062034 9.9925e-01 weaklyHypermeth 1 1.000000 insignificant 0.020902 0.1695987 lowCoverage 1.00000 lowCoverage chr8 4760568 4761568 82820 ENSG00000215389 0.78968 72 5 0.83156 158 5 0.82276 90 5 1.00000 13 0 0.88571 55 5 0.81667 24 2 0.89657 93 5 0.94423 101 5 0.951282 50 5 0.97417 76 5 0.86038 153 5 0.88667 64 5 0.91776 156 5 NA 0 0 0.92603 57 5 0.87601 39 4 0.65081 114 5 0.90000 15 0 0.91800 113 5 0.82444 29 4 1.000000 9 0 1.00000 5 0 0.870000 34 4 0.74921 27 3 NA 0 0 0.93605 170 5 0.46667 13 1 1.00000 5 0 0.90940 139 5 0.95299 173 5 0.89940 126 5 0.96667 36 5 0.82617 126 5 0.87316 82 4 1.00000 72 3 NA 0 0 0.79111 35 4 0.72814 112 5 1.00000 37 5 0.96753 72 5 0.92000 32 5 1.00000 17 2 1.00000 6 0 0.78846 0.80966 0.74424 1.00000 0.79121 0.68590 0.92930 0.92455 0.91815 1.00000 0.85073 0.80769 0.89396 NA 0.88572 0.85159 0.61496 0.80769 0.89944 0.91880 1.000000 1.00000 0.938462 0.91941 NA 0.96078 0.42308 1.00000 0.88299 0.94686 0.88875 0.96154 0.757618 0.84582 1.000000 NA 0.73675 0.72020 1.00000 0.93756 0.84615 1.00000 1.00000 0 0.86481 0.91588 -0.0530441 5 0.86817 0.91594 -0.0477678 0.9837472 0.0142684 weaklyHypometh 1 1.00000 insignificant 0.943321 0.0398950 weaklyHypometh 1 1.00000 insignificant -0.0088862 0.863876 lowCoverage 1 lowCoverage 0.86481 0.82436 0.0281508 5 0.86817 0.82937 0.0388028 8.5088e-02 7.5516e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.9250e-01 9.3499e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0337960 5.2031e-01 lowCoverage 1.0000000 lowCoverage 0.86481 0.96951 -0.1055032 3 0.86817 0.97098 -0.10280625 1.0000e+00 6.6722e-05 lowCoverage 1.0000e+00 0.022241 lowCoverage 1.0000e+00 3.7246e-05 lowCoverage 1.0000000 0.037246 lowCoverage -0.0999941 0.00075234 lowCoverage 0.11530 lowCoverage 0.91588 0.82436 0.083369 5 0.91594 0.82937 0.0865706 1.0769e-02 0.996765 weaklyHypermeth 2.3411e-01 1 insignificant 4.7265e-02 0.995238 weaklyHypermeth 1.00000000 1 insignificant 0.042682 5.2950e-01 lowCoverage 1.0000000 lowCoverage 0.91588 0.96951 -0.0526502 3 0.91594 0.97098 -0.05503843 9.8208e-01 0.00028537 lowCoverage 1.0000e+00 0.14269 lowCoverage 0.99955008 0.0033988 lowCoverage 1.00000 1 lowCoverage -0.0911079 0.0935999 lowCoverage 1.00000 lowCoverage 0.82436 0.96951 -0.133873 3 0.82937 0.97098 -0.141609 0.999940 8.5877e-04 lowCoverage 1 0.02493501 lowCoverage 0.9999982 8.1122e-04 lowCoverage 1 0.073747 lowCoverage -0.133790 0.0399485 lowCoverage 1.00000 lowCoverage chr8 6453852 6454852 82855 ANGPT2 ENSG00000091879 0.92559 336 6 0.82131 163 6 0.87029 164 6 0.89291 190 6 0.89606 58 6 0.89623 326 6 0.95556 78 6 0.90478 133 6 0.843249 171 6 0.95060 112 6 0.86211 246 6 0.94444 60 6 0.91376 145 6 NA 0 0 0.94276 143 6 0.95139 47 6 0.94815 72 6 0.84784 184 6 0.94044 116 6 0.88321 235 6 0.885992 65 6 0.91262 118 6 0.870376 186 6 0.94007 73 6 0.87821 38 3 0.90093 131 6 0.90251 130 6 0.89542 64 6 0.79892 78 6 0.85543 194 6 0.89702 131 6 0.89511 360 6 0.63629 177 6 0.93304 85 6 0.78987 261 6 0.44444 26 1 0.94861 95 6 0.10554 234 6 0.94219 276 6 0.91872 307 6 0.92078 224 6 0.87883 268 6 0.87376 201 6 0.92591 0.81701 0.88011 0.89121 0.90525 0.89859 0.95415 0.90777 0.84548 0.95243 0.86840 0.96047 0.91511 NA 0.94232 0.95422 0.94993 0.85090 0.94376 0.88050 0.879008 0.91255 0.872558 0.94514 0.88548 0.88966 0.90804 0.90874 0.79562 0.85999 0.89674 0.88785 0.611969 0.91880 0.765683 0.43874 0.95777 0.10271 0.94379 0.91813 0.91806 0.87026 0.86636 6 0.89493 0.88457 0.0105808 6 0.89560 0.88715 0.0084472 0.2289556 0.6060144 insignificant 1 1.00000 insignificant 0.297051 0.7827919 insignificant 1 1.00000 insignificant 0.0187225 0.187804 insignificant 1 insignificant 0.89493 0.58770 0.3164002 6 0.89560 0.60805 0.2875435 6.1755e-13 1.0000e+00 hypermethylated 6.1755e-11 1.0000000 hypermethylated 6.4477e-03 9.6527e-01 weaklyHypermeth 2.0149e-01 1.000000 insignificant 0.2618077 1.0541e-01 insignificant 1.0000000 insignificant 0.89493 0.90125 -0.0110652 6 0.89560 0.91065 -0.01505464 8.2471e-01 1.1099e-01 insignificant 1.0000e+00 1.000000 insignificant 5.0992e-01 3.5248e-01 insignificant 1.0000000 1.000000 insignificant -0.0020815 0.90107377 insignificant 1.00000 insignificant 0.88457 0.58770 0.313304 6 0.88715 0.60805 0.2790963 3.8474e-08 1.000000 hypermethylated 2.5649e-06 1 hypermethylated 2.5787e-02 0.993491 weaklyHypermeth 0.62895788 1 insignificant 0.243085 1.2642e-01 insignificant 1.0000000 insignificant 0.88457 0.90125 -0.0213307 6 0.88715 0.91065 -0.02350185 9.8430e-01 0.15972813 insignificant 1.0000e+00 1.00000 insignificant 0.92132849 0.2448155 insignificant 1.00000 1 insignificant -0.0208040 0.2404561 insignificant 1.00000 insignificant 0.58770 0.90125 -0.319493 6 0.60805 0.91065 -0.302598 0.999965 2.4717e-04 hypomethylated 1 0.01057133 hypomethylated 0.9865347 1.0244e-01 insignificant 1 1.000000 insignificant -0.263889 0.1034082 insignificant 1.00000 insignificant chr8 11523325 11524325 83018 NCRNA00208 ENSG00000170983 0.77733 339 7 0.73862 167 7 0.82296 133 5 0.88706 256 7 0.72118 98 4 0.75856 366 7 0.65491 92 3 0.75183 179 7 0.62113 91 4 0.70638 128 4 0.88085 304 9 0.61713 54 4 0.786161 161 7 0.818713 73 2 0.62657 164 6 0.70000 53 2 0.166667 78 1 0.91647 622 7 0.91978 268 7 0.933382 266 8 0.80924 108 5 0.785132 176 7 0.876309 114 6 0.72983 112 6 0.79243 425 7 0.73210 239 7 0.87315 205 7 0.78995 56 2 0.86954 171 6 0.955163 251 7 0.88821 229 8 0.90986 326 7 0.539270 138 7 0.514134 238 7 0.535770 223 4 0.681501 163 7 0.557019 139 7 0.667915 298 7 0.81603 208 7 0.78311 261 7 0.78311 307 7 0.67079 158 7 0.84758 277 7 0.88530 0.896058 0.85446 0.89856 0.87737 0.91905 0.81747 0.93108 0.84444 0.89391 0.91861 0.80006 0.948185 0.91714 0.92242 0.93988 0.86850 0.89620 0.934159 0.966289 0.86165 0.92279 0.86170 0.95631 0.907688 0.886111 0.894632 0.89130 0.91072 0.950036 0.94303 0.90592 0.605381 0.504118 0.60148962 0.679510 0.648400 0.476186 0.93103 0.92299 0.93434 0.93825 0.84930 1 0.87381 0.89221 -0.0224722 7 0.79161 0.82612 -0.034514 0.914682 0.0327611 weaklyHypometh 1 1.0000 insignificant 0.84472 0.0674357 insignificant 1 1 insignificant -0.09395945 0.037332 weaklyHypometh 1 insignificant 0.87381 0.602168 0.272603 7 0.79161 0.58888 0.2027250 1.4469e-20 9.9863e-01 hypermethylated 1.8086e-18 1.00000000 hypermethylated 3.3197e-06 0.99960798 hypermethylated 2.2131e-04 1.00000 hypermethylated 0.157681 3.6605e-03 weaklyHypermeth 1.8302e-01 insignificant 0.87381 0.82630 0.0191989 7 0.79161 0.80766 -0.016057 6.0929e-02 0.461654 insignificant 1.0000e+00 1 insignificant 1.1844e-01 0.667034 insignificant 1.0000e+00 1 insignificant -0.0398417 4.1855e-01 insignificant 1.0000e+00 insignificant 0.89221 0.602168 0.301304 7 0.82612 0.58888 0.237239 3.6083e-17 0.99996737 hypermethylated 4.0092e-15 1.00000 hypermethylated 1.9924e-08 0.999931 hypermethylated 3.3206e-06 1 hypermethylated 0.251641 4.0617e-05 hypermethylated 5.8025e-03 hypermethylated 0.89221 0.82630 0.0498663 7 0.82612 0.80766 0.0184571 4.6864e-04 0.5332167 weaklyHypermeth 4.2604e-02 1 weaklyHypermeth 5.2505e-03 0.688115 weaklyHypermeth 0.525045 1 insignificant 0.0541178 0.17355679 insignificant 1.000000 insignificant 0.602168 0.82630 -0.2464058 7 0.588883 0.80766 -0.218782 9.8428e-01 6.4728e-07 hypomethylated 1.0000000 4.3152e-05 hypomethylated 0.98258197 2.7916e-04 hypomethylated 1.00000 2.3263e-02 hypomethylated -0.197523 1.1764e-03 weaklyHypometh 1.3428e-01 insignificant chr8 18764639 18765639 83246 PSD3 ENSG00000156011 0.92203 204 6 0.89862 265 6 0.61735 75 6 0.90144 130 6 0.96296 38 6 0.96112 298 6 0.83571 46 5 0.89984 130 6 0.82788 52 6 0.91148 69 6 0.93580 261 6 0.65000 28 4 0.962028 158 6 0.990196 83 6 0.93542 93 6 0.00000 4 0 1.000000 4 0 0.78728 199 6 0.98316 98 5 0.912518 185 6 0.90000 20 1 0.736516 91 6 0.929630 63 6 0.91688 60 5 0.96667 37 4 0.95197 349 6 0.89286 50 5 0.67530 49 6 0.92667 113 5 0.974019 357 6 0.95018 302 6 0.78672 288 6 0.942982 188 6 0.955556 48 5 NA 0 0 0.833333 4 0 0.987179 78 6 0.981419 301 6 0.72386 104 4 0.82963 62 4 0.84653 86 5 0.74565 85 5 0.78505 69 6 0.93510 0.924560 0.63726 0.90745 0.99687 0.95750 0.76579 0.87656 0.80248 0.91997 0.90169 0.64836 0.963731 0.98923 0.91314 0.40282 0.93496 0.79905 0.973467 0.917477 0.90634 0.72756 0.94022 0.90474 0.974648 0.937428 0.938632 0.74888 0.91324 0.974578 0.96522 0.92478 0.956635 0.971831 NA 0.844593 0.985915 0.974929 0.78873 0.79969 0.81808 0.80435 0.76682 1 0.90165 0.93360 -0.0314340 6 0.90384 0.92872 -0.024881 0.943933 0.0715129 insignificant 1 1.0000 insignificant 0.78086 0.1518659 insignificant 1 1 insignificant -0.03920912 0.500285 insignificant 1 insignificant 0.90165 0.961228 -0.058899 6 0.90384 0.96921 -0.0653761 9.9752e-01 3.0626e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9845e-01 0.00094487 weaklyHypometh 1.0000e+00 0.94487 insignificant -0.095352 1.1023e-01 lowCoverage 1.0000e+00 lowCoverage 0.90165 0.75862 0.1377166 5 0.90384 0.77970 0.124132 8.3576e-08 0.992156 weaklyHypermeth 2.0894e-05 1 weaklyHypermeth 3.0127e-04 0.871577 weaklyHypermeth 7.5317e-02 1 weaklyHypermeth 0.0585978 3.0058e-01 lowCoverage 1.0000e+00 lowCoverage 0.93360 0.961228 -0.026204 6 0.92872 0.96921 -0.040495 8.6487e-01 0.02965089 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8053e-01 0.010837 weaklyHypometh 1.0000e+00 1 insignificant -0.056143 1.8192e-01 lowCoverage 1.0000e+00 lowCoverage 0.93360 0.75862 0.1747479 5 0.92872 0.77970 0.1490126 6.3050e-09 0.9864011 weaklyHypermeth 2.1017e-06 1 weaklyHypermeth 1.2698e-03 0.932548 weaklyHypermeth 0.158726 1 insignificant 0.0978069 0.01869728 lowCoverage 1.000000 lowCoverage 0.961228 0.75862 0.2085236 5 0.969213 0.77970 0.189508 6.9731e-07 1.0000e+00 hypermethylated 0.0006973 1.0000e+00 hypermethylated 0.00080388 1.0000e+00 hypermethylated 0.80388 1.0000e+00 insignificant 0.153950 3.1107e-03 lowCoverage 1.9442e-01 lowCoverage chr8 21252066 21253066 83367 ENSG00000210343 0.73682 392 7 0.62503 309 8 0.71217 127 7 0.72468 358 6 0.81085 99 7 0.71044 483 8 0.65897 149 6 0.63437 167 8 0.56854 106 6 0.63016 115 5 0.73688 271 8 0.86008 52 3 0.591908 153 5 0.814286 53 3 0.65309 157 5 0.43134 102 5 0.604167 44 2 0.82065 393 6 0.74681 226 6 0.541343 413 7 0.91152 85 6 0.665816 148 8 0.738393 165 7 0.53974 128 7 0.81031 139 6 0.67029 301 7 0.49841 200 7 0.54345 74 5 0.61981 277 7 0.554712 399 8 0.56281 307 7 0.67577 313 6 0.341195 271 8 0.403535 253 7 0.666667 144 5 0.633128 246 4 0.396596 326 9 0.762189 311 7 0.65234 472 8 0.83715 375 8 0.63252 491 7 0.76212 411 6 0.67887 410 6 0.84909 0.793983 0.84516 0.80568 0.89236 0.89570 0.90256 0.84750 0.77575 0.81711 0.79432 0.87573 0.793651 0.95847 0.83953 0.83644 0.83802 0.83400 0.815732 0.744390 0.91059 0.76212 0.83403 0.87327 0.883237 0.864218 0.773435 0.84358 0.79490 0.828047 0.77349 0.84803 0.494973 0.470964 0.83446762 0.676260 0.675951 0.820281 0.78856 0.88437 0.82176 0.84147 0.75266 3 0.74718 0.70193 0.0390800 7 0.64482 0.59323 0.051595 0.060491 0.9632646 insignificant 1 1.0000 insignificant 0.51913 0.8007747 insignificant 1 1 insignificant 0.03137652 0.472806 insignificant 1 insignificant 0.74718 0.565806 0.159856 7 0.64482 0.45808 0.1867427 1.2439e-12 9.8597e-01 weaklyHypermeth 7.7747e-11 1.00000000 weaklyHypermeth 6.2468e-05 0.95372415 weaklyHypermeth 3.2878e-03 1.00000 weaklyHypermeth 0.146745 9.7636e-02 insignificant 1.0000e+00 insignificant 0.74718 0.69801 0.0162317 7 0.64482 0.70446 -0.059639 2.6969e-01 0.283311 insignificant 1.0000e+00 1 insignificant 3.0853e-01 0.446499 insignificant 1.0000e+00 1 insignificant -0.0319705 4.9946e-01 insignificant 1.0000e+00 insignificant 0.70150 0.565442 0.112901 8 0.56724 0.41227 0.154966 6.7114e-07 0.92648188 weaklyHypermeth 2.7978e-05 1.00000 weaklyHypermeth 1.7589e-03 0.976925 weaklyHypermeth 6.5144e-02 1 weaklyHypermeth 0.115368 1.8780e-01 insignificant 1.0000e+00 insignificant 0.70193 0.69801 -0.0250692 7 0.59323 0.70446 -0.1112339 8.7371e-01 0.0112607 weaklyHypometh 1.0000e+00 1 insignificant 6.7751e-01 0.264106 insignificant 1.000000 1 insignificant -0.0633470 0.25040454 insignificant 1.000000 insignificant 0.565806 0.69801 -0.1235125 7 0.458081 0.70446 -0.246381 9.9786e-01 1.7567e-05 weaklyHypometh 1.0000000 7.9850e-04 weaklyHypometh 0.98934766 8.1380e-03 weaklyHypometh 1.00000 3.1610e-01 insignificant -0.178715 6.0306e-02 insignificant 1.0000e+00 insignificant chr8 21725507 21726507 83412 GFRA2 ENSG00000168546 0.23318 355 9 0.16521 371 9 0.18143 321 9 0.27833 299 8 0.12768 216 9 0.19753 459 9 0.16365 327 9 0.13834 362 9 0.18806 303 9 0.14862 284 9 0.30372 446 9 0.13790 192 9 0.081737 405 9 0.192997 164 7 0.12739 388 9 0.21296 215 9 0.057197 126 6 0.21960 343 9 0.11039 473 9 0.115053 421 9 0.15673 203 9 0.117017 189 7 0.189647 302 9 0.20961 245 10 0.21963 140 7 0.13737 608 9 0.17578 369 9 0.17651 181 10 0.17869 407 9 0.078911 530 9 0.13395 535 9 0.21755 438 9 0.147659 338 9 0.118927 229 9 0.317175 421 8 0.312500 65 3 0.204538 309 9 0.165760 468 9 0.24911 358 9 0.19471 366 9 0.12632 316 9 0.19573 273 9 0.18729 317 8 0.22804 0.137351 0.16745 0.16556 0.13416 0.19263 0.16526 0.14756 0.09710 0.17277 0.23654 0.11217 0.058527 0.19598 0.12749 0.22462 0.08418 0.19853 0.089986 0.112417 0.21599 0.13514 0.13947 0.14877 0.154212 0.125959 0.103481 0.10659 0.16963 0.079510 0.11195 0.23665 0.143454 0.133638 0.21864932 0.221879 0.199496 0.132064 0.21068 0.16282 0.12728 0.16822 0.19120 8 0.15889 0.15578 0.0185352 9 0.16299 0.17627 -0.013275 0.159691 0.6902714 insignificant 1 1.0000 insignificant 0.21335 0.7662472 insignificant 1 1 insignificant 0.00310053 0.868657 insignificant 1 insignificant 0.15889 0.197814 -0.022147 9 0.16299 0.20415 -0.0411611 1.2122e-05 5.0687e-07 weaklyHypometh 3.3671e-04 0.00050687 weaklyHypometh 1.7402e-04 0.01517385 weaklyHypometh 7.9098e-03 1.00000 weaklyHypometh -0.042044 2.9945e-01 insignificant 1.0000e+00 insignificant 0.15892 0.15828 -0.0267542 9 0.16523 0.19804 -0.032814 3.5438e-01 0.025225 weaklyHypometh 1.0000e+00 1 insignificant 2.4124e-01 0.067857 insignificant 1.0000e+00 1 insignificant -0.0215835 3.9154e-01 insignificant 1.0000e+00 insignificant 0.15578 0.197814 -0.038975 9 0.17627 0.20415 -0.027886 6.7178e-04 0.00012152 weaklyHypometh 1.6794e-02 0.12152 weaklyHypometh 2.0778e-03 0.042050 weaklyHypometh 6.9261e-02 1 weaklyHypometh -0.045145 2.6443e-01 insignificant 1.0000e+00 insignificant 0.15388 0.15828 -0.0443709 9 0.14647 0.19804 -0.0515743 6.6676e-01 0.0014095 weaklyHypometh 1.0000e+00 1 insignificant 5.0520e-01 0.019490 weaklyHypometh 1.000000 1 insignificant -0.0246840 0.31891759 insignificant 1.000000 insignificant 0.198129 0.15828 0.0044888 9 0.209743 0.19804 0.011699 6.3571e-02 1.0274e-05 inconclusive 1.0000000 4.8923e-04 inconclusive 0.29104607 3.6457e-02 inconclusive 1.00000 9.1142e-01 insignificant 0.020461 6.2179e-01 insignificant 1.0000e+00 insignificant chr8 22046370 22047370 83424 HR ENSG00000168453 0.27321 526 18 0.11684 447 22 0.23246 475 22 0.11288 336 14 0.13607 401 18 0.21576 543 19 0.13029 713 22 0.17874 364 18 0.15699 545 20 0.10774 543 21 0.12403 732 22 0.29175 557 20 0.037924 535 20 0.090278 70 5 0.13145 652 20 0.15703 483 17 0.188051 451 17 0.21544 583 10 0.22751 516 20 0.060459 472 19 0.25743 303 14 0.157032 270 10 0.079627 401 19 0.10518 360 19 0.14457 396 8 0.18930 500 22 0.14908 295 17 0.19581 218 14 0.22841 298 17 0.064221 573 20 0.17439 613 22 0.19951 471 21 0.075595 409 20 0.089991 495 21 0.166126 323 14 0.128099 208 14 0.147734 218 16 0.082056 497 21 0.17534 483 19 0.18283 585 22 0.17405 351 10 0.22050 481 11 0.14240 373 16 0.17097 0.070062 0.21595 0.10922 0.10933 0.16940 0.11497 0.17451 0.14613 0.11394 0.10757 0.21539 0.057608 0.12412 0.09539 0.13349 0.14531 0.16777 0.157622 0.051099 0.15551 0.12388 0.10117 0.10993 0.052655 0.079032 0.097678 0.11185 0.27271 0.045959 0.11280 0.18810 0.052302 0.048565 0.06872082 0.043936 0.111476 0.068828 0.11321 0.13262 0.15286 0.15272 0.09254 5 0.14247 0.13330 0.0170082 19 0.17382 0.18401 -0.010189 0.109429 0.9645228 insignificant 1 1.0000 insignificant 0.15949 0.9916771 insignificant 1 1 insignificant -0.00280003 0.902314 insignificant 1 insignificant 0.14244 0.091756 0.069187 20 0.17382 0.10624 0.0675753 1.1141e-11 9.9716e-01 weaklyHypermeth 5.8637e-10 1.00000000 weaklyHypermeth 4.0299e-09 1.00000000 weaklyHypermeth 5.0373e-07 1.00000 weaklyHypermeth 0.044312 5.7633e-02 insignificant 1.0000e+00 insignificant 0.14247 0.11351 0.0091621 15 0.16857 0.21328 -0.044716 4.0608e-01 0.520622 insignificant 1.0000e+00 1 insignificant 2.3154e-01 0.965451 insignificant 1.0000e+00 1 insignificant -0.0197791 3.2811e-01 insignificant 1.0000e+00 insignificant 0.13329 0.091927 0.051248 19 0.18808 0.11357 0.074507 3.0171e-04 0.99957402 weaklyHypermeth 8.1544e-03 1.00000 weaklyHypermeth 4.9606e-04 0.999999 weaklyHypermeth 2.2548e-02 1 weaklyHypermeth 0.047112 5.6662e-02 insignificant 1.0000e+00 insignificant 0.13390 0.11351 -0.0061334 15 0.19670 0.21328 -0.0165832 7.6891e-01 0.2571084 insignificant 1.0000e+00 1 insignificant 9.0057e-01 0.721438 insignificant 1.000000 1 insignificant -0.0169791 0.42952897 insignificant 1.000000 insignificant 0.092013 0.11361 -0.0566361 17 0.117627 0.22090 -0.103272 9.9944e-01 1.0487e-06 weaklyHypometh 1.0000000 6.1691e-05 weaklyHypometh 0.99999878 3.2988e-04 weaklyHypometh 1.00000 2.3563e-02 weaklyHypometh -0.064091 1.0406e-02 weaklyHypometh 4.9552e-01 insignificant chr8 22129078 22130078 83425 ENSG00000177725 0.93345 188 5 0.85747 555 5 0.91689 248 5 0.95401 176 5 0.94189 194 5 0.83619 267 5 0.63726 239 5 0.79421 244 5 0.87433 166 5 0.89662 219 5 0.89776 334 5 0.96753 55 5 0.946587 267 5 0.926053 150 5 0.91583 299 5 0.96364 45 5 NA 0 0 0.62768 239 5 0.94932 564 5 0.956051 269 5 0.94789 120 5 0.837000 91 5 0.752565 204 5 0.78222 115 5 0.86927 73 5 0.86053 478 5 0.86490 245 5 0.84352 83 5 0.92717 616 5 0.787417 571 5 0.93771 632 5 0.93841 310 5 0.157717 334 5 0.129271 259 5 0.047961 399 5 0.200000 30 3 0.063315 394 5 0.201141 486 5 0.91358 264 5 0.93133 234 5 0.93843 148 5 0.77622 185 5 0.87354 167 5 0.92702 0.849692 0.91823 0.96340 0.95113 0.90775 0.88604 0.90395 0.86938 0.89868 0.89077 0.97403 0.950983 0.91327 0.92083 0.96023 NA 0.74397 0.949854 0.951432 0.94211 0.83837 0.90803 0.93038 0.863878 0.930050 0.871515 0.80150 0.92722 0.945102 0.93818 0.91314 0.164626 0.137545 0.05828649 0.160580 0.081313 0.193159 0.89655 0.90598 0.93487 0.81231 0.82097 5 0.90664 0.91968 -0.0139821 5 0.71974 0.77788 -0.058139 0.898758 0.1662085 insignificant 1 1.0000 insignificant 0.36609 0.7737149 insignificant 1 1 insignificant 0.02144627 0.477731 lowCoverage 1 lowCoverage 0.90683 0.137224 0.775934 5 0.83970 0.10515 0.7345504 1.0607e-73 1.0000e+00 hypermethylated 1.0607e-70 1.00000000 hypermethylated 2.4836e-14 1.00000000 hypermethylated 1.2418e-11 1.00000 hypermethylated 0.750596 1.9831e-11 lowCoverage 4.9578e-09 lowCoverage 0.90649 0.87273 0.0332290 5 0.71311 0.92155 -0.208443 1.9832e-01 0.910004 insignificant 1.0000e+00 1 insignificant 1.6166e-01 0.931499 insignificant 1.0000e+00 1 insignificant -0.0027890 9.4241e-01 lowCoverage 1.0000e+00 lowCoverage 0.91990 0.137224 0.783871 5 0.79642 0.10515 0.691268 1.2997e-58 0.99999563 hypermethylated 1.2997e-55 1.00000 hypermethylated 1.4403e-13 1.000000 hypermethylated 1.4403e-10 1 hypermethylated 0.729150 6.9795e-10 lowCoverage 2.3265e-07 lowCoverage 0.91994 0.87149 0.0472929 5 0.84731 0.87155 -0.0242385 3.3226e-03 0.9370445 weaklyHypermeth 2.2151e-01 1 insignificant 1.8997e-01 0.972201 insignificant 1.000000 1 insignificant -0.0242353 0.51417752 insignificant 1.000000 insignificant 0.137224 0.87247 -0.7376569 5 0.105149 0.89540 -0.790253 1.0000e+00 2.3915e-29 hypomethylated 1.0000000 2.3915e-26 hypomethylated 1.00000000 2.7805e-08 hypomethylated 1.00000 1.8241e-05 hypomethylated -0.753385 2.7880e-08 lowCoverage 1.3940e-05 lowCoverage chr8 22494793 22495793 83433 PDLIM2 ENSG00000120913 0.81597 163 6 0.72391 129 9 0.80392 119 9 0.92569 196 6 0.89815 48 4 0.74911 212 9 0.69444 46 3 0.76353 151 9 0.84713 89 7 0.82850 197 9 0.87510 248 9 0.76164 64 6 0.878216 233 9 0.928086 165 9 0.80075 90 9 0.62176 39 6 0.733333 18 1 0.70248 203 6 0.76677 152 9 0.767151 175 10 0.69163 94 9 0.784030 149 9 0.772328 125 9 0.70833 37 3 0.86104 108 6 0.82002 247 9 0.59512 170 9 0.50295 54 6 0.75487 170 9 0.899707 260 9 0.78877 257 9 0.84178 152 6 0.647482 108 6 0.889329 100 9 0.846154 378 10 0.944444 50 6 0.745318 100 8 0.790924 246 9 0.83027 68 6 0.69299 141 6 0.70443 110 6 0.73742 79 6 0.88067 125 6 0.80357 0.743008 0.78982 0.86078 0.85930 0.85798 0.68863 0.82746 0.78072 0.88401 0.81926 0.80234 0.855521 0.89987 0.85512 0.60486 0.75679 0.80310 0.761923 0.763796 0.82184 0.75136 0.82745 0.87752 0.912633 0.852013 0.855608 0.91574 0.82344 0.854949 0.85620 0.83322 0.771685 0.887995 1.00000000 0.911614 0.890260 0.816144 0.73033 0.84513 0.71104 0.79033 0.75416 6 0.83303 0.85628 -0.0122696 9 0.76971 0.64535 0.124358 0.087346 0.7673479 insignificant 1 1.0000 insignificant 0.21413 0.7036222 insignificant 1 1 insignificant 0.04256709 0.270909 insignificant 1 insignificant 0.83297 0.904713 -0.066199 9 0.75531 0.74825 0.0070633 9.4874e-01 1.6803e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.6240e-01 0.04284617 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.016326 7.3938e-01 insignificant 1.0000e+00 insignificant 0.83554 0.78352 0.0496119 6 0.82522 0.73155 0.093672 2.5121e-03 0.811075 weaklyHypermeth 1.9324e-01 1 insignificant 8.6207e-02 0.715249 insignificant 1.0000e+00 1 insignificant 0.0251254 5.6320e-01 insignificant 1.0000e+00 insignificant 0.85667 0.904713 -0.051736 9 0.65443 0.74825 -0.093818 9.9610e-01 0.00696216 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9947e-01 0.057302 insignificant 1.0000e+00 1 insignificant -0.058893 3.0270e-01 insignificant 1.0000e+00 insignificant 0.86276 0.78352 0.0628554 6 0.78622 0.73155 0.0546760 2.5291e-02 0.8632849 weaklyHypermeth 9.4540e-01 1 insignificant 5.3646e-02 0.719124 insignificant 1.000000 1 insignificant -0.0174416 0.73048495 insignificant 1.000000 insignificant 0.910678 0.78394 0.1103209 6 0.876570 0.75072 0.125848 1.8108e-02 9.8788e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.04362310 9.6917e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.041452 4.8543e-01 insignificant 1.0000e+00 insignificant chr8 22541107 22542107 83434 KIAA1967 ENSG00000158941 0.54794 171 6 0.57458 161 6 0.57837 125 8 0.63228 184 6 0.44920 127 6 0.77412 235 7 0.35510 129 6 0.72681 136 6 0.43532 140 5 0.63245 157 7 0.53263 239 7 0.56078 87 5 0.431690 181 8 0.288791 123 6 0.55593 118 7 0.20952 65 5 0.605556 20 2 0.53355 232 6 0.72413 200 5 0.453146 157 7 0.74965 106 6 0.653177 96 6 0.510876 131 3 0.51539 114 7 0.54848 149 5 0.65200 184 8 0.49313 146 7 0.56738 101 5 0.54232 232 8 0.508588 218 7 0.59898 236 8 0.67170 218 7 0.492637 197 8 0.573282 208 7 1.000000 137 3 0.551871 72 5 0.479143 109 6 0.319104 279 7 0.62037 236 5 0.64579 235 6 0.59548 175 5 0.56469 239 5 0.50440 250 6 0.64866 0.606107 0.60503 0.63100 0.30682 0.70430 0.56160 0.72811 0.63313 0.63215 0.73508 0.56613 0.582607 0.53305 0.47212 0.39055 0.62466 0.52642 0.765473 0.453120 0.76091 0.48083 0.69276 0.56934 0.612720 0.666298 0.583120 0.74450 0.59403 0.606379 0.64853 0.78746 0.446677 0.574361 0.93786090 0.563172 0.685274 0.344651 0.56365 0.57551 0.47891 0.45335 0.53059 3 0.56894 0.65337 -0.0478734 7 0.47921 0.57568 -0.096466 0.998421 0.0317263 weaklyHypometh 1 1.0000 insignificant 0.99894 0.2417239 insignificant 1 1 insignificant -0.05421003 0.182261 insignificant 1 insignificant 0.56869 0.556886 0.085155 6 0.45454 0.38215 0.0723862 4.2577e-01 4.9342e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.1022e-01 0.65525559 insignificant 1.0000e+00 1.00000 insignificant -0.039244 7.0471e-01 insignificant 1.0000e+00 insignificant 0.56908 0.57621 0.0720571 5 0.48060 0.62372 -0.143121 3.8996e-01 0.248007 insignificant 1.0000e+00 1 insignificant 5.0458e-01 0.691622 insignificant 1.0000e+00 1 insignificant -0.0560504 1.8153e-01 insignificant 1.0000e+00 insignificant 0.65349 0.558559 0.116766 6 0.55496 0.41400 0.140962 1.0981e-01 0.90508936 insignificant 1.0000e+00 1.00000 insignificant 6.5008e-01 0.815502 insignificant 1.0000e+00 1 insignificant 0.014966 8.8204e-01 insignificant 1.0000e+00 insignificant 0.65471 0.57509 0.1130330 5 0.63829 0.52965 0.1086423 5.8847e-03 0.9162739 weaklyHypermeth 3.2693e-01 1 insignificant 1.5180e-02 0.899930 weaklyHypermeth 0.898980 1 insignificant -0.0018403 0.95755748 insignificant 1.000000 insignificant 0.559118 0.57333 0.0068891 5 0.451635 0.49988 -0.048245 5.5817e-01 5.3295e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.44401461 8.4576e-01 insignificant 1.00000 1.0000e+00 insignificant -0.016806 8.6802e-01 insignificant 1.0000e+00 insignificant chr8 22541271 22542271 83435 KIAA1967 ENSG00000158941 0.54794 171 6 0.57458 161 6 0.57837 125 8 0.63228 184 6 0.44920 127 6 0.77412 235 7 0.35510 129 6 0.72681 136 6 0.43532 140 5 0.63245 157 7 0.53263 239 7 0.56078 87 5 0.431690 181 8 0.288791 123 6 0.55593 118 7 0.20952 65 5 0.605556 20 2 0.53355 232 6 0.72413 200 5 0.453146 157 7 0.74965 106 6 0.653177 96 6 0.510876 131 3 0.51539 114 7 0.54848 149 5 0.65200 184 8 0.49313 146 7 0.56738 101 5 0.54232 232 8 0.508588 218 7 0.59898 236 8 0.67170 218 7 0.492637 197 8 0.573282 208 7 1.000000 137 3 0.551871 72 5 0.479143 109 6 0.319104 279 7 0.62037 236 5 0.64579 235 6 0.59548 175 5 0.56469 239 5 0.50440 250 6 0.64866 0.606107 0.60503 0.63100 0.30682 0.70430 0.56160 0.72811 0.63313 0.63215 0.73508 0.56613 0.582607 0.53305 0.47212 0.39055 0.62466 0.52642 0.765473 0.453120 0.76091 0.48083 0.69276 0.56934 0.612720 0.666298 0.583120 0.74450 0.59403 0.606379 0.64853 0.78746 0.446677 0.574361 0.93786090 0.563172 0.685274 0.344651 0.56365 0.57551 0.47891 0.45335 0.53059 3 0.56894 0.65337 -0.0478734 7 0.47921 0.57568 -0.096466 0.998421 0.0317263 weaklyHypometh 1 1.0000 insignificant 0.99894 0.2417239 insignificant 1 1 insignificant -0.05421003 0.182261 insignificant 1 insignificant 0.56869 0.556886 0.085155 6 0.45454 0.38215 0.0723862 4.2577e-01 4.9342e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.1022e-01 0.65525559 insignificant 1.0000e+00 1.00000 insignificant -0.039244 7.0471e-01 insignificant 1.0000e+00 insignificant 0.56908 0.57621 0.0720571 5 0.48060 0.62372 -0.143121 3.8996e-01 0.248007 insignificant 1.0000e+00 1 insignificant 5.0458e-01 0.691622 insignificant 1.0000e+00 1 insignificant -0.0560504 1.8153e-01 insignificant 1.0000e+00 insignificant 0.65349 0.558559 0.116766 6 0.55496 0.41400 0.140962 1.0981e-01 0.90508936 insignificant 1.0000e+00 1.00000 insignificant 6.5008e-01 0.815502 insignificant 1.0000e+00 1 insignificant 0.014966 8.8204e-01 insignificant 1.0000e+00 insignificant 0.65471 0.57509 0.1130330 5 0.63829 0.52965 0.1086423 5.8847e-03 0.9162739 weaklyHypermeth 3.2693e-01 1 insignificant 1.5180e-02 0.899930 weaklyHypermeth 0.898980 1 insignificant -0.0018403 0.95755748 insignificant 1.000000 insignificant 0.559118 0.57333 0.0068891 5 0.451635 0.49988 -0.048245 5.5817e-01 5.3295e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.44401461 8.4576e-01 insignificant 1.00000 1.0000e+00 insignificant -0.016806 8.6802e-01 insignificant 1.0000e+00 insignificant chr8 22571850 22572850 83439 BIN3 ENSG00000147439 0.46092 211 5 0.27741 116 5 0.55893 126 5 0.47759 232 5 0.47816 90 5 0.39030 311 5 0.71236 140 5 0.48451 96 5 0.42868 236 5 0.55554 183 5 0.55867 148 5 0.43939 78 5 0.140596 218 5 0.410948 87 5 0.36053 207 5 0.57879 103 5 0.331389 95 5 0.27066 306 5 0.25775 77 5 0.398756 252 5 0.73111 55 5 0.084876 201 5 0.448813 134 5 0.39636 79 5 0.44057 111 5 0.15466 194 5 0.34669 142 5 0.40957 105 5 0.31581 134 5 0.166942 193 5 0.30391 157 5 0.75885 237 5 0.175192 182 5 0.015975 116 5 0.000000 99 3 0.082051 47 3 0.206113 186 5 0.170085 167 5 0.15579 314 5 0.18329 291 5 0.19059 213 3 0.13048 252 5 0.20495 243 5 0.45560 0.282253 0.58005 0.48340 0.37282 0.56202 0.73389 0.46350 0.33583 0.60332 0.58321 0.43505 0.139501 0.39777 0.39067 0.50114 0.33865 0.27463 0.326419 0.294343 0.87204 0.11599 0.54520 0.54251 0.412533 0.206882 0.354538 0.50853 0.33431 0.214127 0.31148 0.75816 0.012592 0.016238 0.00099839 0.074396 0.022904 0.145683 0.21622 0.20535 0.23831 0.13806 0.23644 5 0.41118 0.39265 0.0232568 5 0.41437 0.25403 0.160343 0.499683 0.9701494 insignificant 1 1.0000 insignificant 0.54633 0.9763072 insignificant 1 1 insignificant 0.04874701 0.475488 insignificant 1 insignificant 0.41130 0.047679 0.375962 5 0.47356 0.19511 0.2784542 2.8670e-17 9.9962e-01 hypermethylated 2.6064e-15 1.00000000 hypermethylated 1.2879e-11 0.99975309 hypermethylated 3.2198e-09 1.00000 hypermethylated 0.320357 1.3232e-05 lowCoverage 1.6540e-03 lowCoverage 0.41112 0.21630 0.1992089 5 0.38582 0.15447 0.231350 4.9073e-08 0.999989 weaklyHypermeth 1.6358e-05 1 weaklyHypermeth 2.5423e-08 1.000000 weaklyHypermeth 2.5423e-05 1 weaklyHypermeth 0.2555733 6.3874e-08 lowCoverage 6.3874e-05 lowCoverage 0.39310 0.047679 0.355551 5 0.29031 0.19511 0.095205 8.9221e-08 0.91750812 hypermethylated 4.9567e-06 1.00000 hypermethylated 7.3366e-09 0.959814 hypermethylated 1.4673e-06 1 hypermethylated 0.271610 1.3047e-03 lowCoverage 8.6977e-02 lowCoverage 0.39356 0.21630 0.1829750 5 0.33870 0.15447 0.1842261 8.1184e-04 0.9997619 weaklyHypermeth 6.2449e-02 1 weaklyHypermeth 3.2793e-05 0.999990 weaklyHypermeth 0.011273 1 weaklyHypermeth 0.2068263 0.00543713 lowCoverage 0.505357 lowCoverage 0.042929 0.21630 -0.1683098 5 0.094294 0.15447 -0.060180 9.9911e-01 4.6727e-09 weaklyHypometh 1.0000000 5.1919e-07 weaklyHypometh 0.99011255 1.6532e-04 weaklyHypometh 1.00000 1.6532e-02 weaklyHypometh -0.064784 1.3962e-01 lowCoverage 1.0000e+00 lowCoverage chr8 22688585 22689585 83451 EGR3 ENSG00000179388 0.83316 440 11 0.77146 315 11 0.74378 258 11 0.76942 403 11 0.79242 84 10 0.81303 495 11 0.66357 223 11 0.87404 296 11 0.75344 261 11 0.80666 204 11 0.77705 320 11 0.84135 160 11 0.687443 348 11 NA 0 0 0.77005 224 11 0.65180 89 8 0.660699 171 11 0.69275 391 11 0.81191 189 11 0.622763 370 11 0.65042 100 9 0.567081 196 11 0.806444 303 11 0.79263 117 10 0.77035 151 11 0.74616 466 11 0.63353 150 9 0.75192 135 11 0.82409 270 11 0.645192 453 11 0.72745 481 11 0.86657 530 11 0.513370 311 11 0.448062 232 11 0.539474 100 5 0.501067 170 11 0.565025 162 11 0.723750 328 11 0.72670 393 11 0.77914 429 11 0.78883 301 11 0.72272 425 11 0.71134 439 11 0.84256 0.784569 0.78051 0.81342 0.81986 0.82755 0.72385 0.90026 0.78283 0.90123 0.80953 0.87524 0.787285 NA 0.82675 0.71380 0.75271 0.75578 0.839293 0.667917 0.70014 0.66030 0.84388 0.82957 0.807037 0.781215 0.676010 0.79909 0.82817 0.736520 0.78511 0.87028 0.612967 0.519980 0.53363124 0.589875 0.704002 0.779808 0.77227 0.82126 0.83475 0.78955 0.75916 9 0.78172 0.76104 0.0103976 11 0.75602 0.74581 0.010209 0.431260 0.9554810 insignificant 1 1.0000 insignificant 0.11815 0.9885538 insignificant 1 1 insignificant 0.02274949 0.468598 insignificant 1 insignificant 0.78172 0.601688 0.168076 11 0.75602 0.51178 0.2442415 1.2965e-13 9.9889e-01 weaklyHypermeth 8.6436e-12 1.00000000 weaklyHypermeth 7.5902e-08 0.97968145 weaklyHypermeth 7.5902e-06 1.00000 weaklyHypermeth 0.206111 1.7731e-03 weaklyHypermeth 1.1082e-01 insignificant 0.78177 0.76346 0.0110515 11 0.75657 0.74005 0.016515 4.5936e-02 0.458451 weaklyHypermeth 1.0000e+00 1 insignificant 1.3428e-01 0.471486 insignificant 1.0000e+00 1 insignificant 0.0088243 7.0628e-01 insignificant 1.0000e+00 insignificant 0.76104 0.601688 0.157828 11 0.74581 0.51178 0.234032 2.5065e-09 0.98905488 weaklyHypermeth 1.5666e-07 1.00000 weaklyHypermeth 1.5669e-05 0.646644 weaklyHypermeth 1.1192e-03 1 weaklyHypermeth 0.183361 2.9534e-03 weaklyHypermeth 1.4585e-01 insignificant 0.76105 0.76346 -0.0011933 11 0.74543 0.74005 0.0053774 5.7880e-01 0.4942636 insignificant 1.0000e+00 1 insignificant 7.8332e-01 0.354284 insignificant 1.000000 1 insignificant -0.0139252 0.65387927 insignificant 1.000000 insignificant 0.604006 0.76346 -0.1586984 11 0.558303 0.74005 -0.181749 7.6603e-01 5.7508e-06 weaklyHypometh 1.0000000 2.8754e-04 weaklyHypometh 0.66299998 1.1427e-04 weaklyHypometh 1.00000 1.3373e-02 weaklyHypometh -0.197287 2.4992e-03 weaklyHypometh 1.6661e-01 insignificant chr8 22694446 22695446 83452 EGR3 ENSG00000179388 0.47111 187 4 0.30930 409 10 0.37929 177 10 0.51612 178 4 0.29292 216 9 0.59672 231 5 0.32862 286 10 0.33434 253 10 0.36514 207 10 0.38147 173 9 0.44351 412 10 0.24103 150 8 0.213202 248 10 0.430323 72 3 0.32415 216 9 0.24667 114 7 0.179066 98 6 0.30591 176 4 0.29827 314 9 0.200030 260 7 0.55145 119 7 0.250000 14 0 0.520564 126 6 0.29620 141 8 0.82941 88 2 0.35739 355 10 0.43492 175 8 0.34885 83 6 0.37715 249 9 0.299834 444 10 0.25272 458 10 0.57610 176 7 0.084400 339 10 0.098303 268 9 0.000000 124 7 0.051282 71 3 0.231922 188 7 0.189132 498 10 0.23489 305 8 0.31084 231 8 0.31565 211 6 0.35536 226 4 0.33871 172 5 0.58117 0.296720 0.47015 0.53865 0.32171 0.64256 0.41136 0.39493 0.38941 0.45400 0.51011 0.41588 0.229679 0.51442 0.41393 0.27279 0.39234 0.31027 0.302347 0.248968 0.57009 0.13884 0.55991 0.44022 0.816760 0.387564 0.374802 0.38438 0.39135 0.358731 0.25807 0.53250 0.032338 0.063515 0.00190058 0.037296 0.110929 0.101545 0.17639 0.41611 0.29043 0.31732 0.25719 2 0.36281 0.36836 0.0011134 9 0.33764 0.35441 -0.016765 0.834689 0.4333237 insignificant 1 1.0000 insignificant 0.98744 0.0986943 insignificant 1 1 insignificant -0.08168868 0.153956 insignificant 1 insignificant 0.36281 0.091398 0.278089 10 0.33764 0.12427 0.2133733 7.9594e-20 1.0000e+00 hypermethylated 8.8438e-18 1.00000000 hypermethylated 2.6360e-12 1.00000000 hypermethylated 8.7867e-10 1.00000 hypermethylated 0.233687 2.5925e-04 hypermethylated 2.1604e-02 hypermethylated 0.36281 0.31354 0.0987785 8 0.33764 0.31797 0.019673 9.9375e-05 0.088666 weaklyHypermeth 1.4196e-02 1 weaklyHypermeth 1.4612e-03 0.687584 weaklyHypermeth 2.0875e-01 1 insignificant 0.0317707 3.3339e-01 insignificant 1.0000e+00 insignificant 0.36836 0.091398 0.278331 9 0.35441 0.12427 0.230138 2.2395e-17 0.99999999 hypermethylated 2.7994e-15 1.00000 hypermethylated 4.8314e-12 1.000000 hypermethylated 1.6105e-09 1 hypermethylated 0.315376 8.5171e-05 hypermethylated 1.0646e-02 hypermethylated 0.36836 0.31354 0.0894331 8 0.35441 0.31797 0.0364379 5.2149e-03 0.3298958 weaklyHypermeth 3.2593e-01 1 insignificant 1.5982e-03 0.945654 weaklyHypermeth 0.177574 1 insignificant 0.1134594 0.05098717 insignificant 1.000000 insignificant 0.091398 0.31354 -0.2025467 8 0.124270 0.31797 -0.193700 9.9011e-01 4.3811e-09 hypomethylated 1.0000000 5.1919e-07 hypomethylated 0.99895684 6.3870e-05 hypomethylated 1.00000 1.0645e-02 hypomethylated -0.201916 1.2085e-03 weaklyHypometh 1.3428e-01 insignificant chr8 22887322 22888322 83471 PEBP4 ENSG00000134020 0.70279 122 5 0.72812 293 7 0.68276 266 5 0.67986 133 5 0.59975 187 6 0.63992 221 7 0.70584 201 8 0.72133 283 8 0.64588 213 5 0.66278 205 5 0.73935 342 8 0.64108 321 5 0.576863 191 5 0.739182 124 6 0.73983 283 5 0.68229 344 4 0.603001 295 3 0.73979 153 4 0.86191 418 5 0.737433 152 5 0.73359 100 7 0.558877 73 2 0.720455 172 7 0.75463 103 7 0.53667 83 6 0.78220 331 7 0.73062 211 4 0.78283 116 6 0.50297 323 5 0.672555 415 7 0.73072 357 7 0.80494 201 7 0.194657 275 7 0.240882 210 8 0.222746 336 8 0.000000 51 4 0.227694 321 9 0.305483 396 7 0.64136 163 6 0.63398 135 6 0.76166 148 6 0.75968 106 4 0.72305 127 7 0.72887 0.731973 0.68213 0.83717 0.66448 0.80290 0.77441 0.76446 0.70403 0.68757 0.78940 0.79733 0.662278 0.76172 0.70875 0.72864 0.82351 0.58271 0.827210 0.684255 0.86529 0.63588 0.75555 0.77194 0.636361 0.727444 0.738397 0.63105 0.73397 0.795372 0.78973 0.74102 0.198138 0.275666 0.22597117 0.000000 0.215789 0.436270 0.63334 0.54190 0.69008 0.64656 0.68122 4 0.73846 0.74728 0.0015616 5 0.64726 0.70311 -0.055854 0.563490 0.2669477 insignificant 1 1.0000 insignificant 0.57418 0.6897183 insignificant 1 1 insignificant -0.00109969 0.973896 insignificant 1 insignificant 0.73831 0.275016 0.431823 6 0.59332 0.22253 0.3707896 3.6933e-43 1.0000e+00 hypermethylated 1.8467e-40 1.00000000 hypermethylated 6.8448e-15 0.99999885 hypermethylated 6.8448e-12 1.00000 hypermethylated 0.492911 2.6427e-05 hypermethylated 2.9363e-03 hypermethylated 0.74019 0.66568 0.0953984 4 0.74458 0.68919 0.055384 3.4139e-06 0.398429 lowCoverage 6.8278e-04 1 lowCoverage 2.0540e-02 0.780458 lowCoverage 1.0000e+00 1 lowCoverage -0.0124560 7.0556e-01 insignificant 1.0000e+00 insignificant 0.74728 0.275189 0.462726 7 0.70311 0.24276 0.460351 8.4453e-37 0.99999998 hypermethylated 4.2226e-34 1.00000 hypermethylated 2.5459e-12 0.999999 hypermethylated 1.2729e-09 1 hypermethylated 0.494010 2.4544e-06 hypermethylated 4.9088e-04 hypermethylated 0.74776 0.66568 0.0924174 6 0.74468 0.68919 0.0554889 8.1302e-03 0.7223971 weaklyHypermeth 3.9369e-01 1 insignificant 1.7598e-01 0.649095 insignificant 1.000000 1 insignificant -0.0113563 0.78527830 insignificant 1.000000 insignificant 0.275731 0.66568 -0.4178812 6 0.273083 0.68919 -0.416110 9.9749e-01 6.2286e-20 hypomethylated 1.0000000 3.1143e-17 hypomethylated 0.99896274 3.6482e-08 hypomethylated 1.00000 1.8241e-05 hypomethylated -0.505367 6.7080e-06 hypomethylated 1.6770e-03 hypomethylated chr8 23460885 23461885 83475 SLC25A37 ENSG00000147454 0.60240 193 9 0.54072 228 6 0.63636 46 3 0.65398 178 9 0.58673 52 6 0.65773 305 8 0.69402 80 6 0.77799 92 5 0.56803 55 5 0.64286 43 3 0.74405 189 5 0.73333 28 3 0.662957 67 6 0.600366 65 5 0.60476 62 6 0.70635 26 2 0.493333 71 5 0.63723 185 8 0.87323 103 6 0.700951 280 8 0.59184 29 3 0.000000 1 0 0.773036 171 9 0.64286 41 3 0.75776 58 3 0.69570 162 6 0.79881 49 5 0.59259 34 3 0.75802 125 6 0.655041 189 5 0.65541 189 5 0.76061 186 8 0.232361 198 6 0.456421 109 5 0.327778 188 6 0.333333 6 0 0.329343 181 5 0.522651 170 5 0.67746 274 9 0.52330 221 9 0.76093 169 8 0.69609 115 8 0.61166 185 9 0.73153 0.610034 0.67487 0.72332 0.60582 0.74469 0.62278 0.69371 0.59358 0.72222 0.73992 0.68827 0.609878 0.65990 0.63459 0.63161 0.69547 0.67929 0.858754 0.751517 0.71032 NA 0.80460 0.63082 0.726881 0.630133 0.705883 0.48765 0.74911 0.555419 0.76790 0.87198 0.367643 0.521529 0.42870370 0.238952 0.480566 0.612318 0.72529 0.70219 0.85218 0.75071 0.73446 0 0.74328 0.79173 -0.0160975 5 0.60347 0.66220 -0.058730 0.977422 0.1186465 insignificant 1 1.0000 insignificant 0.80132 0.2343153 insignificant 1 1 insignificant 0.01573052 0.811694 lowCoverage 1 lowCoverage 0.76752 0.228873 0.485856 5 0.66163 0.34623 0.3154031 2.5476e-24 9.1999e-01 hypermethylated 3.6394e-22 1.00000000 hypermethylated 6.7463e-07 0.90123557 hypermethylated 5.6219e-05 1.00000 hypermethylated 0.288889 4.0627e-04 lowCoverage 3.1252e-02 lowCoverage 0.74328 0.77905 -0.0342157 6 0.60347 0.63898 -0.035511 7.9973e-01 0.218759 insignificant 1.0000e+00 1 insignificant 7.7966e-01 0.119254 insignificant 1.0000e+00 1 insignificant 0.0019832 9.6615e-01 insignificant 1.0000e+00 insignificant 0.79617 0.228873 0.536068 5 0.68106 0.34623 0.334829 2.0051e-19 0.98887641 hypermethylated 2.8644e-17 1.00000 hypermethylated 7.3154e-06 0.935141 hypermethylated 6.0962e-04 1 hypermethylated 0.273158 2.1970e-03 lowCoverage 1.2923e-01 lowCoverage 0.79173 0.77905 -0.0201010 5 0.66220 0.63898 0.0232194 3.8069e-01 0.6676450 insignificant 1.0000e+00 1 insignificant 6.3818e-01 0.685779 insignificant 1.000000 1 insignificant -0.0137474 0.85467989 lowCoverage 1.000000 lowCoverage 0.228873 0.82109 -0.5856146 5 0.346230 0.70568 -0.359450 8.2109e-01 1.8333e-15 hypomethylated 1.0000000 3.9514e-13 hypomethylated 0.94511616 1.1011e-04 hypomethylated 1.00000 1.3373e-02 hypomethylated -0.286905 8.7122e-04 lowCoverage 1.2446e-01 lowCoverage chr8 23882780 23883780 83508 STC1 ENSG00000159167 0.84897 228 5 0.70980 287 5 0.63121 119 5 0.78116 130 4 0.81876 80 5 0.86042 263 5 0.82611 123 5 0.81892 140 5 0.76197 87 5 0.90861 60 5 0.81859 304 5 0.75333 17 2 0.824712 122 5 0.804348 46 2 0.82545 98 5 0.79848 59 4 0.383333 17 2 0.61067 235 5 0.80081 245 5 0.847895 198 5 0.85947 97 5 0.730476 54 5 0.858197 170 5 0.79095 80 5 0.97000 45 2 0.80884 263 5 0.82730 182 5 0.93556 24 2 0.79472 234 5 0.896145 300 5 0.83251 188 5 0.85429 306 5 0.331626 239 5 0.199792 168 5 0.416667 301 4 0.043939 50 3 0.535484 174 5 0.048667 313 5 0.64846 314 5 0.77278 218 5 0.68046 157 4 0.71622 214 5 0.70168 117 5 0.88458 0.747388 0.63738 0.82733 0.82933 0.91005 0.84846 0.86981 0.75523 0.88289 0.83077 0.76307 0.880807 0.77988 0.84241 0.73600 0.71186 0.70455 0.843922 0.867151 0.83055 0.75692 0.84943 0.68168 0.946479 0.847494 0.836652 0.88816 0.86070 0.909507 0.87752 0.83101 0.425297 0.277986 0.59678231 0.025181 0.578940 0.062259 0.79705 0.83025 0.76954 0.83249 0.77365 3 0.82190 0.85692 -0.0360776 5 0.79108 0.85015 -0.059076 0.988814 0.0021619 weaklyHypometh 1 0.9317 insignificant 0.98293 0.0026308 weaklyHypometh 1 1 insignificant -0.07485945 0.026893 lowCoverage 1 lowCoverage 0.82190 0.400000 0.429620 5 0.79108 0.28644 0.5046394 4.6335e-29 1.0000e+00 hypermethylated 7.7224e-27 1.00000000 hypermethylated 8.1743e-11 0.99999966 hypermethylated 1.6349e-08 1.00000 hypermethylated 0.508982 9.9426e-04 lowCoverage 6.6284e-02 lowCoverage 0.82190 0.82059 0.0216175 5 0.79108 0.71174 0.079340 4.8619e-03 0.680357 weaklyHypermeth 3.0387e-01 1 insignificant 4.9804e-02 0.658096 weaklyHypermeth 1.0000e+00 1 insignificant 0.0677566 5.6717e-02 lowCoverage 1.0000e+00 lowCoverage 0.85692 0.400000 0.476837 5 0.85015 0.28644 0.563715 4.2574e-26 0.99999990 hypermethylated 8.5149e-24 1.00000 hypermethylated 1.9890e-10 1.000000 hypermethylated 4.9725e-08 1 hypermethylated 0.583842 6.1493e-04 lowCoverage 4.7302e-02 lowCoverage 0.85692 0.82059 0.0589908 5 0.85015 0.71174 0.1384161 4.6456e-06 0.8045059 weaklyHypermeth 9.2912e-04 1 weaklyHypermeth 1.1553e-03 0.878683 weaklyHypermeth 0.158726 1 insignificant 0.1426161 0.00037088 lowCoverage 0.065972 lowCoverage 0.400000 0.82059 -0.4016067 5 0.286438 0.71174 -0.425299 1.0000e+00 9.0774e-10 hypomethylated 1.0000000 1.2968e-07 hypomethylated 0.99999997 1.7786e-06 hypomethylated 1.00000 5.9287e-04 hypomethylated -0.441226 2.3693e-03 lowCoverage 1.6661e-01 lowCoverage chr8 25008530 25009530 83550 NEFL ENSG00000104725 0.77233 185 5 0.77068 178 5 0.74213 51 3 0.81557 124 5 0.77111 44 5 0.76122 232 5 0.74643 62 5 0.78052 88 5 0.80455 63 5 0.68611 45 4 0.80076 240 5 0.85000 23 1 0.835714 102 5 0.952381 43 4 0.91611 92 5 0.93452 27 3 0.659722 23 2 0.80345 107 5 0.83148 148 5 0.854739 172 5 0.92361 46 3 0.669231 51 4 0.894321 106 5 0.83333 30 4 0.75333 56 4 0.86815 140 5 0.78530 115 4 0.70758 39 2 0.96331 94 4 0.815642 138 5 0.90228 118 5 0.67780 204 5 0.541438 81 4 0.668462 81 5 0.658333 59 4 0.600000 8 1 0.807712 87 5 0.758967 162 5 0.75650 127 5 0.59432 156 5 0.80267 145 5 0.77192 117 5 0.77776 125 5 0.82713 0.786259 0.80773 0.89049 0.84200 0.87302 0.79492 0.83834 0.82984 0.88534 0.85907 0.90248 0.906282 0.91782 0.93487 0.88459 0.80729 0.87019 0.886446 0.872698 0.95567 0.81649 0.85982 0.87376 0.873995 0.902343 0.810845 0.79422 0.96547 0.890074 0.92120 0.86862 0.750977 0.693763 0.85460993 0.694323 0.876196 0.873291 0.86248 0.90417 0.87902 0.83202 0.86549 2 0.84285 0.85790 -0.0166059 5 0.69361 0.77141 -0.077800 0.947034 0.3027913 insignificant 1 1.0000 insignificant 0.98642 0.4826525 insignificant 1 1 insignificant -0.01167973 0.727465 lowCoverage 1 lowCoverage 0.84326 0.791579 0.046331 5 0.79270 0.65849 0.1342099 4.0940e-02 9.9096e-01 weaklyHypermeth 6.9390e-01 1.00000000 insignificant 5.0628e-02 0.99662926 insignificant 1.0000e+00 1.00000 insignificant 0.131992 1.9604e-02 lowCoverage 8.1553e-01 lowCoverage 0.84326 0.83582 -0.0013489 5 0.79270 0.56851 0.224189 4.6526e-01 0.529626 insignificant 1.0000e+00 1 insignificant 3.6993e-01 0.597127 insignificant 1.0000e+00 1 insignificant 0.0638456 1.7189e-01 lowCoverage 1.0000e+00 lowCoverage 0.85802 0.790795 0.065042 5 0.77141 0.65951 0.111900 3.2158e-02 0.99654980 weaklyHypermeth 5.7426e-01 1.00000 insignificant 9.1718e-02 0.998344 insignificant 1.0000e+00 1 insignificant 0.143672 1.5174e-02 lowCoverage 5.6201e-01 lowCoverage 0.85777 0.83582 0.0159734 5 0.73876 0.56851 0.1702455 2.4557e-01 0.9159831 insignificant 1.0000e+00 1 insignificant 2.1414e-01 0.963071 insignificant 1.000000 1 insignificant 0.0755253 0.14252325 lowCoverage 1.000000 lowCoverage 0.791579 0.83582 -0.0462102 5 0.658492 0.56851 0.089979 7.6330e-01 3.7751e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.95147301 5.0007e-01 insignificant 1.00000 1.0000e+00 insignificant -0.068147 2.4541e-01 lowCoverage 1.0000e+00 lowCoverage chr8 25733839 25734839 83608 CDCA2 ENSG00000184661 0.89941 390 5 0.92747 174 5 0.93360 107 5 0.96454 283 5 0.89383 96 5 0.69786 116 5 0.95178 154 5 0.87608 146 5 0.95509 81 5 0.95139 84 5 0.98324 271 5 0.91714 72 5 0.972414 81 4 0.800000 47 3 0.99545 108 3 1.00000 25 5 NA 0 0 0.93010 297 5 0.94505 693 5 0.831796 167 5 0.08000 20 1 NA 0 0 0.963212 272 5 0.66667 5 0 NA 0 0 0.96753 588 5 0.60000 5 0 0.73810 28 3 0.89147 619 5 0.965893 443 5 0.96766 564 5 0.94561 314 5 0.617598 143 5 0.583141 160 5 0.804576 372 5 1.000000 13 0 0.560784 146 5 0.664762 160 5 0.95766 570 5 0.96664 392 5 0.95326 298 5 0.93189 467 5 0.93170 265 5 0.90846 0.931808 0.93502 0.96633 0.87373 0.72588 0.96022 0.88685 0.95889 0.95766 0.97973 0.91324 0.962994 0.83333 0.99390 1.00000 NA 0.94338 0.948305 0.836315 0.10732 NA 0.96114 0.91069 NA 0.969196 0.560976 0.77642 0.90395 0.966544 0.97315 0.94778 0.604631 0.569831 0.84370296 1.000000 0.605930 0.627875 0.96113 0.96894 0.95726 0.94203 0.93617 0 0.92836 0.93975 -0.0130765 5 0.93820 0.94848 -0.010277 0.979793 0.4837215 insignificant 1 1.0000 insignificant 0.95721 0.4035390 insignificant 1 1 insignificant 0.13855794 0.158926 lowCoverage 1 lowCoverage 0.92834 0.681087 0.246403 5 0.92584 0.67550 0.2503466 2.0123e-18 1.0000e+00 hypermethylated 2.0123e-16 1.00000000 hypermethylated 1.4942e-04 0.99999808 hypermethylated 7.1153e-03 1.00000 hypermethylated 0.212028 2.6205e-02 lowCoverage 9.7055e-01 lowCoverage 0.92834 0.94930 -0.0236890 5 0.92584 0.94919 -0.023343 9.8557e-01 0.066740 insignificant 1.0000e+00 1 insignificant 9.7760e-01 0.182979 insignificant 1.0000e+00 1 insignificant -0.0310592 1.0657e-01 lowCoverage 1.0000e+00 lowCoverage 0.93973 0.681087 0.259918 5 0.93818 0.67550 0.262679 6.7000e-10 1.00000000 hypermethylated 4.7857e-08 1.00000 hypermethylated 1.5785e-02 0.998959 weaklyHypermeth 3.7582e-01 1 insignificant 0.073470 5.2463e-01 lowCoverage 1.0000e+00 lowCoverage 0.93973 0.94930 -0.0105538 5 0.93818 0.94919 -0.0110108 8.5420e-01 0.5188060 insignificant 1.0000e+00 1 insignificant 4.6046e-01 0.360297 insignificant 1.000000 1 insignificant -0.1696171 0.08997208 lowCoverage 1.000000 lowCoverage 0.681087 0.94930 -0.2703954 5 0.675498 0.94919 -0.273689 1.0000e+00 5.3459e-09 hypomethylated 1.0000000 5.3459e-07 hypomethylated 0.99998123 2.1667e-03 weaklyHypometh 1.00000 1.2037e-01 insignificant -0.243087 1.6405e-02 lowCoverage 6.3096e-01 lowCoverage chr8 25931039 25932039 83678 ENSG00000218407 0.62636 270 7 0.64417 162 7 0.64591 88 7 0.85645 196 7 0.67421 75 7 0.77880 344 7 0.69502 115 7 0.73702 137 7 0.67667 99 7 0.70851 92 7 0.72902 260 7 0.45578 49 4 0.732052 149 7 0.600000 27 3 0.67904 126 7 0.76190 38 4 0.658418 64 4 0.82485 159 7 0.78839 216 7 0.798911 219 7 0.79762 30 2 0.839618 69 7 0.737635 130 7 0.63770 76 7 0.84048 66 7 0.78211 318 7 0.85147 84 4 0.72336 58 4 0.71896 121 7 0.836733 298 7 0.79889 306 7 0.70109 369 7 0.667610 119 7 0.632721 126 7 0.645737 198 7 0.676557 54 4 0.732738 59 5 0.754849 302 7 0.71789 226 7 0.78399 208 7 0.74589 219 7 0.65171 155 7 0.76286 201 7 0.75365 0.659212 0.73094 0.86384 0.73541 0.83030 0.76334 0.75421 0.75783 0.73807 0.76886 0.64955 0.758537 0.62870 0.76206 0.85207 0.72461 0.84804 0.821921 0.828114 0.79853 0.84248 0.72865 0.71435 0.820504 0.822307 0.816536 0.82362 0.79358 0.843994 0.85492 0.78414 0.721300 0.646132 0.66770231 0.764154 0.766781 0.812509 0.78766 0.81945 0.78963 0.70011 0.82607 4 0.75806 0.79481 -0.0329890 7 0.66196 0.83737 -0.175406 0.835402 0.1070561 insignificant 1 1.0000 insignificant 0.91275 0.1745601 insignificant 1 1 insignificant -0.06856282 0.021417 weaklyHypometh 1 insignificant 0.75806 0.717949 0.047353 7 0.66196 0.73639 -0.0744257 2.6600e-02 9.6044e-01 weaklyHypermeth 4.6666e-01 1.00000000 insignificant 1.7872e-01 0.96371566 insignificant 1.0000e+00 1.00000 insignificant 0.018540 5.2192e-01 insignificant 1.0000e+00 insignificant 0.75842 0.76908 -0.0037433 7 0.74412 0.76850 -0.024385 6.7089e-01 0.672395 insignificant 1.0000e+00 1 insignificant 9.0851e-01 0.510633 insignificant 1.0000e+00 1 insignificant -0.0288928 3.6418e-01 insignificant 1.0000e+00 insignificant 0.79481 0.717949 0.079563 7 0.83737 0.73639 0.100981 1.5216e-02 0.99994998 weaklyHypermeth 2.9835e-01 1.00000 insignificant 1.4729e-01 0.999903 insignificant 1.0000e+00 1 insignificant 0.087102 7.6826e-03 weaklyHypermeth 3.0731e-01 insignificant 0.79459 0.76908 0.0273509 7 0.79671 0.76850 0.0282061 3.2065e-01 0.9604489 insignificant 1.0000e+00 1 insignificant 5.3975e-01 0.965953 insignificant 1.000000 1 insignificant 0.0396700 0.21739339 insignificant 1.000000 insignificant 0.718129 0.76908 -0.0511506 7 0.732984 0.76850 -0.035520 9.6257e-01 9.3187e-02 insignificant 1.0000000 1.0000e+00 insignificant 0.99473443 8.7984e-02 insignificant 1.00000 1.0000e+00 insignificant -0.047432 1.5413e-01 insignificant 1.0000e+00 insignificant chr8 33516868 33517868 83963 C8orf41 ENSG00000129696 0.77418 238 5 0.46232 236 6 0.51863 144 10 0.86481 364 5 0.46988 134 6 0.50333 268 6 0.74037 141 6 0.45187 202 7 0.49945 121 10 0.53775 95 6 0.50917 368 10 0.48000 83 5 0.816265 134 5 0.471069 94 6 0.81307 181 6 0.54444 42 5 0.843942 1238 4 0.86418 327 5 0.81786 133 4 0.856283 218 5 0.48582 92 5 0.876377 107 4 0.826063 143 5 0.80753 94 5 0.80260 109 4 0.47422 314 5 0.43494 121 5 0.47361 52 5 0.54778 188 5 0.653936 251 5 0.43269 206 5 0.87803 294 6 0.463737 164 6 0.896882 106 6 0.769086 165 4 0.938920 49 4 0.487144 177 6 0.419729 217 5 0.84493 268 5 0.83691 280 5 0.85099 305 5 0.80627 204 5 0.88727 291 6 0.75626 0.783005 0.86432 0.85575 0.84476 0.83361 0.80690 0.79425 0.88213 0.92035 0.81755 0.81999 0.890069 0.87809 0.80731 0.99237 0.86277 0.81812 0.865335 0.785600 0.75958 0.82983 0.86173 0.83779 0.926398 0.797318 0.810578 0.72894 0.78969 0.931510 0.88579 0.83505 0.857359 0.883089 0.69882706 0.933823 0.826095 0.801936 0.83475 0.80335 0.81574 0.94533 0.89231 4 0.80361 0.82243 -0.0102693 5 0.49283 0.54893 -0.056103 0.655655 0.0707557 insignificant 1 1.0000 insignificant 0.84650 0.1517241 insignificant 1 1 insignificant 0.00080906 0.990248 lowCoverage 1 lowCoverage 0.80361 0.798405 0.022727 5 0.49283 0.52253 -0.0296985 1.0155e-01 3.4201e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.3072e-01 0.67418109 insignificant 1.0000e+00 1.00000 insignificant -0.020640 8.4643e-01 insignificant 1.0000e+00 insignificant 0.82731 0.85312 -0.0271937 5 0.80723 0.86521 -0.057981 9.8648e-01 0.012150 weaklyHypometh 1.0000e+00 1 insignificant 9.8732e-01 0.015219 weaklyHypometh 1.0000e+00 1 insignificant -0.2033321 4.4295e-05 hypomethylated 1.1074e-02 hypomethylated 0.82243 0.798405 0.033396 5 0.54893 0.52253 0.026404 1.5143e-01 0.63879281 insignificant 1.0000e+00 1.00000 insignificant 2.5109e-01 0.370188 insignificant 1.0000e+00 1 insignificant -0.021449 8.4887e-01 lowCoverage 1.0000e+00 lowCoverage 0.84450 0.85312 -0.0170197 4 0.82808 0.86521 -0.0371288 9.5494e-01 0.0234182 lowCoverage 1.0000e+00 1 lowCoverage 9.7586e-01 0.034627 lowCoverage 1.000000 1 lowCoverage -0.2041412 0.00281545 lowCoverage 0.402207 lowCoverage 0.809028 0.85312 -0.0482770 4 0.787547 0.86521 -0.077664 9.2795e-01 1.7948e-03 lowCoverage 1.0000000 5.7896e-02 lowCoverage 0.92610910 1.0224e-02 lowCoverage 1.00000 3.7868e-01 lowCoverage -0.182692 1.1358e-01 insignificant 1.0000e+00 insignificant chr8 35635776 35636776 84187 UNC5D ENSG00000156687 0.6899767 118 10 0.6181567 157 9 0.442063 53 7 0.668987 144 10 0.5018519 32 2 0.647139 277 10 0.5560606 72 7 0.604510 191 11 0.5892857 66 5 0.7043457 69 8 0.6248176 246 11 0.533862 36 4 0.6098420 173 9 0.690179 59 4 0.597949 55 5 0.5000000 20 0 0.5500000 22 0 0.638431 198 9 0.5915335 87 9 0.6404082 236 8 0.565909 51 5 0.5757576 47 4 0.536095 95 10 0.584048 73 8 0.555556 33 3 0.6648739 323 11 0.481041 99 8 0.491667 30 3 0.591778 174 11 0.6928118 337 11 0.5958766 288 11 0.587771 332 11 0.558200 99 10 0.496690 124 9 0.58095 63 5 0.36905 16 0 0.469078 93 8 0.52991 237 11 0.645714 44 6 0.6841991 113 10 0.562775 102 8 0.579545 80 8 0.613654 121 10 0.6646298 0.5663564 0.487502 0.625056 0.4556075 0.593952 0.5265317 0.505431 0.5602470 0.607970 0.5501221 0.561340 0.5171586 0.515508 0.493410 0.4579439 0.5233645 0.615727 0.6036125 0.567789 0.536215 0.5023364 0.5769025 0.5802821 0.514019 0.5829287 0.415643 0.504673 0.528497 0.6126534 0.5572482 0.5315520 0.530557 0.393881 0.48948 0.42932 0.455196 0.47170 0.627459 0.5888963 0.510514 0.548442 0.585372 0 0.616183 0.696068 0.0031722 10 0.631177 0.625591 0.0055856 5.6026e-01 0.76588 insignificant 1.0000e+00 1 insignificant 4.0479e-01 0.929315 insignificant 1.000000 1 insignificant 0.0230380 0.334797 insignificant 1 insignificant 0.616183 0.56329 0.1095199 8 0.631177 0.55175 0.0794316 5.9685e-05 9.9494e-01 weaklyHypermeth 1.9895e-03 1.0000e+00 weaklyHypermeth 2.6304e-03 9.9385e-01 weaklyHypermeth 9.7423e-02 1.0000e+00 weaklyHypermeth 0.0993242 2.2052e-02 weaklyHypermeth 0.68913384 insignificant 0.616183 0.567391 -0.0038869 8 0.631177 0.629086 0.0020906 5.9443e-01 3.3187e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.8517e-01 9.5078e-02 insignificant 1.0000e+00 1.000000 insignificant -0.017208 5.3993e-01 insignificant 1.00000000 insignificant 0.696068 0.56329 1.1464e-01 9 0.625591 0.55175 0.073846 4.8458e-04 9.9483e-01 weaklyHypermeth 1.5632e-02 1.0000e+00 weaklyHypermeth 2.7204e-02 9.7466e-01 weaklyHypermeth 8.5014e-01 1.0000e+00 insignificant 0.0762862 6.3661e-02 insignificant 1.00000000 insignificant 0.696068 0.567391 -0.009385 8 0.625591 0.629086 -0.0034951 4.6460e-01 1.0081e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9168e-01 1.0396e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0402456 1.8546e-01 insignificant 1.0000000 insignificant 0.56329 0.567391 -0.103854 6 0.55175 0.629086 -0.077341 9.0784e-01 7.2282e-04 weaklyHypometh 1.0000e+00 3.2855e-02 weaklyHypometh 9.8349e-01 2.0840e-03 weaklyHypometh 1.0000e+00 0.130252 insignificant -0.116532 1.4334e-02 weaklyHypometh 0.65152377 insignificant chr8 38416863 38417863 84431 LETM2 ENSG00000165046 0.0846152 487 12 0.0321907 500 12 0.078035 463 12 0.043770 358 12 0.0186817 276 12 0.087939 655 12 0.0082081 493 12 0.040457 358 12 0.0206287 457 12 0.0219440 348 12 0.0267550 466 12 0.075553 362 12 0.0027297 407 11 0.000000 59 1 0.042177 388 11 0.0146144 307 11 0.0381559 391 10 0.212211 375 11 0.0106397 330 9 0.0446896 594 12 0.029167 176 11 0.0757241 290 11 0.132485 388 10 0.086740 271 12 0.017083 156 10 0.0088786 543 12 0.034920 356 12 0.024603 168 12 0.020284 361 9 0.0188736 668 12 0.0185730 603 12 0.022309 755 12 0.680990 320 12 0.701370 165 12 0.79801 236 10 0.61921 114 9 0.576545 243 10 0.63955 359 12 0.043761 551 12 0.1885117 491 10 0.032006 326 10 0.120052 391 11 0.105134 464 12 0.0324219 0.0195457 0.072806 0.026774 0.0087417 0.082476 0.0140971 0.025819 0.0230923 0.029865 0.0348908 0.035354 0.0054907 NA 0.030274 0.0117204 0.0514892 0.158423 0.0132463 0.024847 0.018638 0.0368351 0.0549517 0.0085202 0.026436 0.0109940 0.022365 0.016919 0.027670 0.0148692 0.0124891 0.0129790 0.585619 0.626998 0.70319 0.57418 0.606056 0.59450 0.043274 0.1266585 0.038271 0.103701 0.104650 9 0.042983 0.022823 0.0205390 12 0.043104 0.023257 0.0198471 7.3749e-03 1.00000 weaklyHypermeth 1.0000e+00 1 insignificant 7.1982e-02 0.999897 insignificant 1.000000 1 insignificant 0.0043964 0.774373 insignificant 1 insignificant 0.042983 0.64829 -0.5981460 12 0.043104 0.66113 -0.6180278 1.0000e+00 6.4524e-114 hypomethylated 1.0000e+00 6.4524e-111 hypomethylated 1.0000e+00 2.2047e-32 hypomethylated 1.0000e+00 2.2047e-29 hypomethylated -0.6240793 1.0860e-06 hypomethylated 0.00013575 hypomethylated 0.043004 0.094467 -0.0380892 12 0.050288 0.094654 -0.0443662 9.9998e-01 9.9688e-05 weaklyHypometh 1.0000e+00 0.0498442 weaklyHypometh 1.0000e+00 3.1976e-05 weaklyHypometh 1.0000e+00 0.031976 weaklyHypometh -0.052693 1.3978e-01 insignificant 1.00000000 insignificant 0.023020 0.64808 -6.2454e-01 12 0.043929 0.65039 -0.606461 1.0000e+00 2.0040e-91 hypomethylated 1.0000e+00 2.0040e-88 hypomethylated 1.0000e+00 3.4995e-26 hypomethylated 1.0000e+00 3.4995e-23 hypomethylated -0.6284757 1.0073e-06 hypomethylated 0.00016788 hypomethylated 0.022833 0.094467 -0.057730 12 0.027133 0.094654 -0.0675212 1.0000e+00 1.7123e-11 weaklyHypometh 1.0000e+00 1.7123e-08 weaklyHypometh 1.0000e+00 5.4640e-07 weaklyHypometh 1.0000e+00 0.0005464 weaklyHypometh -0.0570895 1.1592e-01 insignificant 1.0000000 insignificant 0.64850 0.094467 0.557794 12 0.68799 0.094654 0.593333 2.7832e-40 1.0000e+00 hypermethylated 2.7832e-37 1.0000e+00 hypermethylated 1.1409e-16 1.0000e+00 hypermethylated 1.1409e-13 1.000000 hypermethylated 0.571386 2.8134e-07 hypermethylated 0.00028134 hypermethylated chr8 38417028 38418028 84432 LETM2 ENSG00000165046 0.0193250 323 8 0.0244008 417 8 0.036907 321 8 0.039187 199 8 0.0170635 211 8 0.029438 451 8 0.0048077 383 8 0.012944 239 8 0.0151920 360 8 0.0055556 247 8 0.0139375 358 8 0.059379 277 8 0.0040946 308 7 0.000000 59 1 0.014205 299 7 0.0021322 253 7 0.0114589 294 6 0.122736 168 7 0.0099168 277 7 0.0394253 410 8 0.018750 124 7 0.0865079 159 7 0.040393 295 8 0.125291 199 8 0.000000 105 8 0.0070679 422 8 0.011458 246 8 0.012554 106 8 0.018522 309 7 0.0037479 493 8 0.0056933 449 8 0.016651 538 8 0.632274 241 8 0.668721 134 8 0.76319 198 8 0.53299 88 7 0.435734 162 6 0.55902 253 8 0.017166 362 8 0.0701640 352 8 0.019982 179 8 0.040675 247 7 0.054151 261 8 0.0138293 0.0088621 0.044160 0.022263 0.0103501 0.030192 0.0089078 0.012671 0.0195762 0.010293 0.0140195 0.018056 0.0077368 NA 0.012009 0.0036183 0.0153936 0.098485 0.0102134 0.019649 0.021934 0.0305504 0.0077349 0.0120058 0.000000 0.0066171 0.010985 0.010905 0.022086 0.0070606 0.0043816 0.0078365 0.525730 0.594608 0.68146 0.47357 0.482827 0.50475 0.013924 0.0577856 0.013840 0.038285 0.054385 7 0.021357 0.013364 0.0082692 8 0.019254 0.011752 0.0075020 1.3757e-01 0.99992 insignificant 1.0000e+00 1 insignificant 2.8497e-01 0.997296 insignificant 1.000000 1 insignificant -0.0047812 0.710679 insignificant 1 insignificant 0.021357 0.58675 -0.5520329 8 0.019254 0.58792 -0.5686659 1.0000e+00 2.3827e-70 hypomethylated 1.0000e+00 1.1913e-67 hypomethylated 1.0000e+00 1.5463e-22 hypomethylated 1.0000e+00 7.7315e-20 hypomethylated -0.5745496 5.2181e-05 hypomethylated 0.00372718 hypomethylated 0.021371 0.035689 -0.0151752 8 0.024068 0.041614 -0.0175465 9.9852e-01 3.5672e-03 weaklyHypometh 1.0000e+00 0.7134336 insignificant 9.9956e-01 2.4037e-03 weaklyHypometh 1.0000e+00 0.759221 insignificant -0.016322 2.0824e-01 insignificant 1.00000000 insignificant 0.013643 0.58659 -5.7188e-01 8 0.040987 0.57993 -0.538941 1.0000e+00 1.4034e-48 hypomethylated 1.0000e+00 7.0169e-46 hypomethylated 1.0000e+00 2.3752e-18 hypomethylated 1.0000e+00 1.1876e-15 hypomethylated -0.5697684 3.6636e-05 hypomethylated 0.00281819 hypomethylated 0.013372 0.035689 -0.023972 8 0.014690 0.041614 -0.0269240 9.9999e-01 3.2277e-05 weaklyHypometh 1.0000e+00 1.6139e-02 weaklyHypometh 9.9998e-01 6.3451e-04 weaklyHypometh 1.0000e+00 0.3172527 insignificant -0.0115413 4.5470e-01 insignificant 1.0000000 insignificant 0.58692 0.035689 0.541655 8 0.60990 0.041614 0.568286 2.1382e-24 1.0000e+00 hypermethylated 1.0691e-21 1.0000e+00 hypermethylated 1.6124e-11 1.0000e+00 hypermethylated 8.0621e-09 1.000000 hypermethylated 0.558227 4.5493e-05 hypermethylated 0.00909851 hypermethylated chr8 38426975 38427975 84434 LETM2 ENSG00000165046 0.7198001 474 6 0.7217085 230 6 0.704246 239 6 0.645734 288 6 0.6362579 113 6 0.740714 425 6 0.7758212 230 6 0.627646 200 6 0.6677115 248 6 0.7629632 194 6 0.7970343 230 6 0.715335 206 6 0.5530984 279 6 0.775641 41 2 0.578265 257 6 0.7652504 163 6 0.3886883 230 6 0.485177 340 6 0.6047121 153 6 0.6446130 345 6 0.914880 96 6 0.2111721 184 6 0.722336 280 6 0.782392 135 6 0.676540 96 6 0.6836932 347 6 0.777857 144 6 0.875910 114 6 0.675250 198 6 0.7119290 315 6 0.5090470 298 6 0.767886 425 6 0.051977 267 6 0.071324 170 6 NA 0 0 0.36493 100 5 0.098138 118 6 0.38335 293 6 0.276513 470 6 0.3539948 476 6 0.283023 312 6 0.183181 435 6 0.278786 363 6 0.7147905 0.7157162 0.705563 0.644620 0.6341365 0.742229 0.7698707 0.629063 0.6525342 0.761807 0.7961466 0.704827 0.5495354 0.687084 0.574594 0.7758250 0.3777697 0.478347 0.6145670 0.649367 0.914462 0.2079672 0.7143210 0.7980895 0.664991 0.6881490 0.771116 0.880678 0.677074 0.7184916 0.5081679 0.7651383 0.055761 0.068326 NA 0.34765 0.094184 0.38360 0.267544 0.3461126 0.281848 0.182438 0.277227 6 0.660389 0.681231 -0.0257696 6 0.661473 0.679145 -0.0176724 8.3616e-01 0.33467 insignificant 1.0000e+00 1 insignificant 9.9750e-01 0.045857 weaklyHypometh 1.000000 1 insignificant -0.0268867 0.649896 insignificant 1 insignificant 0.660389 0.18249 0.4741857 6 0.661473 0.21125 0.4502196 1.7736e-29 1.0000e+00 hypermethylated 5.9120e-27 1.0000e+00 hypermethylated 4.7879e-13 1.0000e+00 hypermethylated 2.3939e-10 1.0000e+00 hypermethylated 0.4715777 1.9477e-03 lowCoverage 0.07790610 lowCoverage 0.660389 0.276751 0.3930229 6 0.661473 0.274873 0.3865999 2.1592e-30 1.0000e+00 hypermethylated 2.1592e-27 1.0000000 hypermethylated 7.1988e-18 1.0000e+00 hypermethylated 7.1988e-15 1.000000 hypermethylated 0.390421 3.1733e-07 hypermethylated 0.00021664 hypermethylated 0.681231 0.18249 5.0403e-01 6 0.679145 0.21125 0.467892 1.8540e-18 1.0000e+00 hypermethylated 3.0901e-16 1.0000e+00 hypermethylated 9.4014e-11 1.0000e+00 hypermethylated 4.7007e-08 1.0000e+00 hypermethylated 0.4984644 5.0629e-04 lowCoverage 0.02410911 lowCoverage 0.681231 0.276751 0.419128 6 0.679145 0.274873 0.4042724 8.8888e-18 1.0000e+00 hypermethylated 2.9629e-15 1.0000e+00 hypermethylated 1.8570e-10 1.0000e+00 hypermethylated 1.8570e-07 1.0000000 hypermethylated 0.4173081 4.6928e-06 hypermethylated 0.0017556 hypermethylated 0.18249 0.276751 -0.075421 6 0.21125 0.274873 -0.063620 9.4352e-01 2.2946e-02 weaklyHypometh 1.0000e+00 6.9534e-01 insignificant 9.9973e-01 1.7362e-02 weaklyHypometh 1.0000e+00 0.723428 insignificant -0.081156 3.4983e-01 lowCoverage 1.00000000 lowCoverage chr8 38480207 38481207 84437 FGFR1 ENSG00000077782 0.7939815 88 5 0.9285714 40 4 0.912121 60 5 0.935484 157 5 0.8299320 59 7 0.991589 164 5 0.8986569 84 7 0.932234 65 5 0.9285714 8 0 0.5000000 2 0 0.8555349 186 7 1.000000 5 0 0.7142857 18 0 0.928571 15 0 1.000000 24 3 0.3333333 6 0 NA 0 0 0.927910 72 5 0.8163265 72 5 0.8035714 42 5 0.952381 27 0 0.9047619 62 5 0.811508 48 5 0.839286 40 6 0.853726 300 6 0.9134412 149 5 0.738095 15 0 0.777778 54 5 0.833333 92 5 0.8385900 68 7 0.8798701 67 6 0.906926 109 5 0.864881 92 7 0.769841 96 5 0.80646 190 7 0.87427 100 5 0.846537 39 4 0.94124 160 5 0.689460 177 5 0.8755102 82 6 0.779861 80 5 0.926842 195 5 0.844766 201 7 0.9527778 1.0000000 0.943636 0.909677 0.9333333 0.988225 0.9692308 0.905128 1.0000000 NA 0.9510822 1.000000 1.0000000 1.000000 1.000000 NA NA 0.913492 0.9428571 0.925000 1.000000 0.8666667 0.9527778 1.0000000 0.965217 0.9788177 0.633333 0.888889 0.966667 0.9454545 0.9651515 0.8883117 0.960833 0.977778 0.88333 0.95731 0.870000 0.96774 0.765244 0.8923810 0.935833 0.926842 0.822672 0 0.919452 0.917556 0.0060590 5 0.860420 0.847935 0.0124851 5.4748e-01 0.78220 insignificant 1.0000e+00 1 insignificant 3.7394e-01 0.957708 insignificant 1.000000 1 insignificant -0.0104216 0.810268 lowCoverage 1 lowCoverage 0.919452 0.91581 0.0048144 5 0.860420 0.86734 -0.0069239 4.3705e-01 5.2201e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6932e-01 7.3994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0068194 8.8341e-01 lowCoverage 1.00000000 lowCoverage 0.919452 0.854422 0.0737567 5 0.860420 0.834917 0.0255033 2.9453e-05 8.6464e-01 weaklyHypermeth 1.8408e-03 1.0000000 weaklyHypermeth 4.7557e-05 9.9870e-01 weaklyHypermeth 5.2841e-03 1.000000 weaklyHypermeth 0.020432 7.2479e-01 lowCoverage 1.00000000 lowCoverage 0.917556 0.91581 7.2221e-05 5 0.847935 0.86734 -0.019409 5.7757e-01 5.9129e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7256e-01 4.7584e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0036023 9.0641e-01 lowCoverage 1.00000000 lowCoverage 0.917556 0.854422 0.074402 5 0.847935 0.834917 0.0130182 2.7706e-03 7.3770e-01 weaklyHypermeth 1.5392e-01 1.0000e+00 insignificant 1.2758e-02 9.9262e-01 weaklyHypermeth 7.0878e-01 1.0000000 insignificant 0.0308536 5.1779e-01 lowCoverage 1.0000000 lowCoverage 0.91581 0.854422 0.074185 5 0.86734 0.834917 0.032427 4.1493e-03 9.6819e-01 weaklyHypermeth 8.2985e-01 1.0000e+00 insignificant 1.7325e-02 9.8790e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.027251 5.8606e-01 insignificant 1.00000000 insignificant chr8 38486415 38487415 84438 FGFR1 ENSG00000077782 0.4998393 73 4 0.2955988 256 5 0.359259 85 4 0.476733 72 4 0.5356061 68 4 0.623122 149 4 0.4636720 154 4 0.476786 111 4 0.1678261 105 3 0.3400000 33 3 0.4869878 185 5 0.313492 29 3 0.2277193 49 3 0.260000 40 3 0.311905 77 4 0.4833333 22 1 NA 0 0 0.457864 32 4 0.3400000 135 4 0.4774747 130 4 0.526061 34 4 NA 0 0 0.420048 110 5 0.348932 88 5 0.333333 7 0 0.3839136 203 5 0.232427 94 5 0.224478 48 3 0.376971 151 3 0.3056189 253 5 0.4330476 279 5 0.389875 90 4 0.521171 158 5 0.207063 70 4 0.69850 143 3 NA 0 0 0.688333 121 5 0.33064 202 5 0.410500 107 4 0.2471917 114 5 0.518462 67 4 0.364583 37 2 0.316667 92 5 0.3284784 0.2770012 0.329881 0.273113 0.4576913 0.451777 0.3560253 0.417844 0.1890690 0.315819 0.3901798 0.376917 0.1578055 0.075706 0.254439 0.7612994 NA 0.504713 0.2994350 0.350685 0.366153 NA 0.3702319 0.4006953 0.269719 0.2944355 0.194699 0.241033 0.362191 0.2182689 0.3592210 0.3724566 0.415085 0.226685 0.89758 NA 0.621610 0.12572 0.349092 0.2017781 0.356150 0.213983 0.333333 0 0.360310 0.340457 0.0168814 5 0.407261 0.374454 0.0328078 1.2943e-01 0.77522 insignificant 1.0000e+00 1 insignificant 2.7604e-01 0.842829 insignificant 1.000000 1 insignificant 0.0385169 0.320323 lowCoverage 1 lowCoverage 0.360310 0.47118 -0.1251482 5 0.407261 0.53936 -0.1320992 9.9576e-01 8.3495e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.2862e-01 2.5102e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0892871 4.2020e-01 lowCoverage 1.00000000 lowCoverage 0.360310 0.374101 0.0649302 4 0.407261 0.325191 0.0820707 5.2180e-02 9.8431e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.1608e-01 8.8274e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.028373 6.0987e-01 lowCoverage 1.00000000 lowCoverage 0.340457 0.47118 -1.4032e-01 5 0.374454 0.53936 -0.164907 9.8459e-01 4.2393e-03 weaklyHypometh 1.0000e+00 8.4787e-01 insignificant 9.6234e-01 2.0512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1278040 2.6515e-01 lowCoverage 1.00000000 lowCoverage 0.340457 0.374101 0.025663 4 0.374454 0.325191 0.0492628 1.9749e-01 8.5431e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3069e-01 7.3579e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0101438 8.5300e-01 lowCoverage 1.0000000 lowCoverage 0.47118 0.374101 0.215797 4 0.53936 0.325191 0.214170 1.3992e-02 9.9879e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.2045e-01 9.5734e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.117660 3.1770e-01 lowCoverage 1.00000000 lowCoverage chr8 38529833 38530833 84440 C8orf86 ENSG00000196166 0.0017857 315 7 0.0071762 384 7 0.015204 429 7 0.013282 264 7 0.0014881 283 7 0.018681 365 7 0.0120343 414 7 0.020542 385 7 0.0077731 475 7 0.0050897 400 7 0.0023041 356 7 0.022877 308 7 0.0174382 310 7 0.033144 138 4 0.011652 363 7 0.0000000 296 7 0.0057226 291 6 0.013269 301 7 0.0073071 236 7 0.0055909 353 7 0.053793 135 7 0.0023419 173 7 0.039665 214 7 0.014349 185 7 0.000000 163 7 0.0035211 348 7 0.010704 331 7 0.033102 136 7 0.034317 245 7 0.0155214 442 7 0.0115277 411 7 0.018481 305 7 0.436856 245 7 0.899847 120 7 0.56189 440 6 0.31277 52 4 0.668622 128 7 0.12942 359 7 0.070790 313 7 0.0093168 272 7 0.020240 171 4 0.016976 298 7 0.010271 283 7 0.0012905 0.0149831 0.011845 0.017948 0.0048679 0.021072 0.0128645 0.022679 0.0052602 0.011203 0.0016651 0.018467 0.0180616 0.028716 0.010520 0.0000000 0.0088614 0.020161 0.0055505 0.012292 0.057694 0.0067034 0.0271132 0.0160412 0.000000 0.0033643 0.011342 0.035380 0.027673 0.0137818 0.0081842 0.0175972 0.415379 0.860923 0.60934 0.21518 0.685330 0.09347 0.060535 0.0077891 0.022488 0.013580 0.016064 7 0.012451 0.013925 -0.0014557 7 0.010336 0.012939 -0.0026024 3.6381e-01 0.21574 insignificant 1.0000e+00 1 insignificant 3.8115e-01 0.514104 insignificant 1.000000 1 insignificant -0.0086588 0.117570 insignificant 1 insignificant 0.012455 0.45461 -0.4430172 7 0.011813 0.43035 -0.4185388 1.0000e+00 1.1452e-35 hypomethylated 1.0000e+00 3.8174e-33 hypomethylated 1.0000e+00 2.2811e-19 hypomethylated 1.0000e+00 7.6036e-17 hypomethylated -0.4904499 6.8531e-03 weaklyHypometh 0.23631424 insignificant 0.012455 0.035153 -0.0222836 7 0.011813 0.029625 -0.0178123 9.5301e-01 9.1306e-06 weaklyHypometh 1.0000e+00 0.0091306 weaklyHypometh 8.5729e-01 2.9760e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.014401 2.8096e-01 insignificant 1.00000000 insignificant 0.013952 0.45461 -4.4049e-01 7 0.014787 0.43035 -0.415565 1.0000e+00 4.8767e-22 hypomethylated 1.0000e+00 1.6256e-19 hypomethylated 1.0000e+00 2.3522e-15 hypomethylated 1.0000e+00 7.8408e-13 hypomethylated -0.4817911 7.3437e-03 weaklyHypometh 0.28244971 insignificant 0.013952 0.035153 -0.017962 7 0.014787 0.029625 -0.0148381 9.9246e-01 1.0251e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2490e-01 6.2738e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0057419 6.6313e-01 insignificant 1.0000000 insignificant 0.45461 0.035153 0.446090 7 0.43035 0.029625 0.400727 3.3067e-09 1.0000e+00 hypermethylated 1.1022e-06 1.0000e+00 hypermethylated 9.8183e-09 1.0000e+00 hypermethylated 3.2728e-06 1.000000 hypermethylated 0.476049 7.5528e-03 weaklyHypermeth 0.42580959 insignificant chr8 55456153 55457153 84672 RNU105C ENSG00000199212 0.4366801 220 8 0.6584037 282 8 0.435146 181 8 0.511029 151 6 0.5572492 149 8 0.623513 304 8 0.6637931 182 7 0.649346 142 8 0.6038142 141 8 0.6616748 104 8 0.6664415 280 8 0.706883 103 8 0.5049242 109 8 0.422619 41 4 0.509709 108 6 0.5419043 64 7 0.6601732 64 5 0.509815 146 7 0.6052231 150 8 0.3589791 198 8 0.446853 116 8 0.5416122 41 3 0.542558 179 8 0.369060 143 8 0.609375 35 2 0.5491954 346 8 0.434522 167 8 0.445246 98 7 0.471000 172 8 0.2978510 290 8 0.5527781 327 8 0.613284 344 8 0.095686 263 8 0.038462 143 8 0.14516 306 7 0.35071 32 4 0.284590 175 8 0.20221 329 8 0.278218 307 10 0.4042626 186 8 0.407832 132 6 0.514740 90 3 0.282696 108 7 0.6402702 0.6988722 0.559798 0.611369 0.6535362 0.659942 0.6526431 0.682074 0.6267264 0.651916 0.6802710 0.723436 0.6021289 0.606573 0.575172 0.5060042 0.5699836 0.618751 0.7592270 0.558091 0.601120 0.4717367 0.5866106 0.5682130 0.610759 0.6019901 0.523665 0.493562 0.566864 0.4548420 0.6038585 0.6208739 0.172830 0.079844 0.28473 0.27601 0.321457 0.30771 0.476378 0.5374681 0.524028 0.564553 0.460288 3 0.613658 0.486930 0.1096921 8 0.492056 0.398003 0.0940526 2.9404e-09 0.99936 weaklyHypermeth 2.9404e-06 1 weaklyHypermeth 6.0263e-05 0.996697 weaklyHypermeth 0.060263 1 weaklyHypermeth 0.0749215 0.045913 weaklyHypermeth 1 insignificant 0.615830 0.13782 0.4447492 8 0.615070 0.15305 0.4620212 1.1036e-47 1.0000e+00 hypermethylated 1.1036e-44 1.0000e+00 hypermethylated 2.7884e-16 1.0000e+00 hypermethylated 2.7884e-13 1.0000e+00 hypermethylated 0.3782281 1.4722e-04 hypermethylated 0.00832530 hypermethylated 0.613658 0.503038 0.1941600 7 0.492056 0.300496 0.1915603 4.0803e-15 9.9999e-01 weaklyHypermeth 5.8290e-13 1.0000000 weaklyHypermeth 5.7000e-05 9.9999e-01 weaklyHypermeth 5.7000e-03 1.000000 weaklyHypermeth 0.186816 8.7973e-03 weaklyHypermeth 0.48214355 insignificant 0.493711 0.13782 3.2213e-01 8 0.497504 0.15305 0.344455 1.1301e-23 1.0000e+00 hypermethylated 5.6507e-21 1.0000e+00 hypermethylated 4.1980e-11 1.0000e+00 hypermethylated 4.1980e-08 1.0000e+00 hypermethylated 0.3033066 4.7755e-04 hypermethylated 0.02387740 hypermethylated 0.486930 0.503038 0.086382 7 0.398003 0.300496 0.0975077 5.1933e-03 9.9999e-01 weaklyHypermeth 2.7333e-01 1.0000e+00 insignificant 1.9956e-02 9.9997e-01 weaklyHypermeth 9.0707e-01 1.0000000 insignificant 0.1118947 6.7850e-02 insignificant 1.0000000 insignificant 0.13782 0.515567 -0.238106 7 0.15305 0.375620 -0.222571 1.0000e+00 1.8757e-09 hypomethylated 1.0000e+00 3.7514e-07 hypomethylated 1.0000e+00 9.1754e-05 hypomethylated 1.0000e+00 0.029122 hypomethylated -0.191412 1.6668e-02 weaklyHypometh 0.66672556 insignificant chr8 60356698 60357698 84885 ENSG00000206853 0.6269925 223 6 0.5130169 165 6 0.535872 190 6 0.664971 162 6 0.5564713 59 6 0.619068 400 6 0.5000000 155 6 0.625284 199 6 0.5664532 130 6 0.6134412 116 6 0.7259695 220 6 0.548421 94 6 0.5847076 201 6 NA 0 0 0.687665 139 6 0.5356999 84 6 0.5888502 150 6 0.659493 170 6 0.6519384 222 6 0.6186294 320 6 0.638846 88 6 0.4740328 96 6 0.591218 132 6 0.477712 57 6 0.592782 80 6 0.5165022 273 6 0.503111 89 6 0.618559 83 6 0.572209 244 6 0.5765355 300 6 0.6305340 377 6 0.624308 367 6 0.475649 162 6 0.537290 146 6 0.54989 160 6 0.48750 54 6 0.561453 71 6 0.54746 300 6 0.698105 205 6 0.5688895 221 6 0.643216 196 6 0.613425 221 6 0.645950 202 6 0.6294849 0.5341179 0.552182 0.656217 0.5888805 0.603266 0.4940774 0.640074 0.5806096 0.611619 0.7337062 0.561283 0.6194072 NA 0.705413 0.5478317 0.5909848 0.658535 0.6505834 0.625177 0.650473 0.4719670 0.5982892 0.4737421 0.593899 0.5358035 0.470721 0.588729 0.579423 0.5899539 0.6203311 0.6185990 0.474041 0.515426 0.54810 0.46347 0.581135 0.56708 0.696350 0.5617039 0.643472 0.615999 0.639261 6 0.611945 0.575938 0.0345458 6 0.612345 0.583155 0.0291895 3.2405e-02 0.75009 weaklyHypermeth 1.0000e+00 1 insignificant 1.9294e-02 0.787958 weaklyHypermeth 1.000000 1 insignificant 0.0331785 0.150984 insignificant 1 insignificant 0.611945 0.53415 0.0745999 6 0.612345 0.54120 0.0711407 1.4726e-03 9.9915e-01 weaklyHypermeth 3.4247e-02 1.0000e+00 weaklyHypermeth 5.2927e-03 9.9931e-01 weaklyHypermeth 1.7642e-01 1.0000e+00 insignificant 0.0746672 2.2643e-03 weaklyHypermeth 0.08708866 weaklyHypermeth 0.611945 0.639234 -0.0166891 6 0.612345 0.632857 -0.0205122 9.0044e-01 2.0629e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3882e-01 1.0065e-01 insignificant 1.0000e+00 1.000000 insignificant -0.032709 2.3523e-01 insignificant 1.00000000 insignificant 0.575938 0.53415 3.8106e-02 6 0.583155 0.54120 0.041951 2.6990e-02 8.5359e-01 weaklyHypermeth 5.9977e-01 1.0000e+00 insignificant 5.2233e-02 8.7415e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0414887 8.7288e-02 insignificant 1.00000000 insignificant 0.575938 0.639234 -0.049531 6 0.583155 0.632857 -0.0497018 9.8317e-01 2.0788e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9610e-01 8.1923e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0658879 3.8055e-02 weaklyHypometh 1.0000000 insignificant 0.53415 0.639234 -0.087994 6 0.54120 0.632857 -0.091653 9.9760e-01 9.9712e-04 weaklyHypometh 1.0000e+00 4.1547e-02 weaklyHypometh 9.9995e-01 5.9721e-04 weaklyHypometh 1.0000e+00 0.057449 weaklyHypometh -0.107377 3.7496e-03 weaklyHypometh 0.26782564 insignificant chr8 62039747 62040747 85044 ENSG00000222462 0.76934 123 5 0.63000 78 5 0.71342 77 2 0.67500 80 5 0.72444 53 5 0.57989 178 5 0.48185 55 2 0.82546 80 5 0.71616 36 2 0.88333 38 2 0.72111 120 5 0.61905 47 2 0.79471 49 2 0.87500 17 0 0.75304 65 2 0.83024 50 2 0.70476 26 2 0.71853 83 5 0.63005 94 5 0.78678 147 5 0.75052 35 2 0.76842 50 2 0.57187 97 5 0.65186 41 5 0.80157 35 4 0.72241 78 3 0.61417 41 2 0.61905 25 2 0.71741 51 2 0.73599 108 5 0.84004 94 5 0.76037 162 5 0.80941 51 2 0.58452 41 2 0.44813 64 3 0.61420 39 3 0.73110 52 2 0.54060 98 6 0.57880 104 3 0.68348 117 5 0.51292 101 6 0.56840 90 2 0.59117 123 6 0.82956 0.78333 0.74325 0.93981 0.90206 0.86512 0.81593 0.82881 0.83577 0.92284 0.81072 0.81481 0.84499 0.90867 0.83941 0.87121 0.75485 0.92051 0.81414 0.83754 0.89383 0.90351 0.78705 0.72941 0.84909 0.93343 0.70770 0.83457 0.84610 0.84580 0.84419 0.84574 0.81220 0.62346 0.57099 0.45589 0.76344 0.80323 0.81782 0.90307 0.85881 0.86802 0.86340 2 0.81660 0.81395 0.0013706 5 0.70194 0.71696 -0.015024 0.77631 0.510376 insignificant 1 1 insignificant 0.80271 0.825386 insignificant 1 1 insignificant 0.008803 0.78932 lowCoverage 1 lowCoverage 0.81751 0.71014 0.122034 3 0.71252 0.44176 0.270766 0.00040552 0.99944 lowCoverage 0.019310 1 lowCoverage 0.016945 0.98992 lowCoverage 0.7702 1 lowCoverage 0.100282 0.12757 lowCoverage 1 lowCoverage 0.81886 0.84486 -0.014376 5 0.72086 0.54742 0.173434 0.031930 0.674839 inconclusive 1 1 insignificant 0.17203 0.840659 insignificant 1 1 insignificant 0.134655 0.0034993 lowCoverage 0.87482 lowCoverage 0.81468 0.71014 0.116193 3 0.67491 0.44176 0.2331542 1.4176e-02 0.99970 lowCoverage 5.9068e-01 1 lowCoverage 0.0582196 0.98237 lowCoverage 1.00000 1 lowCoverage 0.0914786 0.16062 lowCoverage 1 lowCoverage 0.81648 0.84486 -0.0116818 5 0.74158 0.54742 0.1941557 0.44405 0.62969 insignificant 1 1 insignificant 0.28467 0.76237 insignificant 1 1 insignificant 0.1258520 0.006026 lowCoverage 1 lowCoverage 0.71261 0.84934 -0.134809 3 0.42720 0.62178 -0.1945814 0.97496 5.8864e-02 lowCoverage 1 1.0000000 lowCoverage 0.72463 0.0448121 lowCoverage 1 1.00000 lowCoverage 0.0343733 0.58407 lowCoverage 1 lowCoverage chr8 66755842 66756842 85516 MTFR1 ENSG00000066855 0.72266 224 9 0.77457 110 8 0.62324 126 9 0.76268 186 9 0.67619 76 9 0.70197 222 9 0.60644 114 9 0.65762 127 7 0.57522 87 8 0.51568 89 6 0.67741 295 9 0.46734 58 4 0.73523 124 8 0.86923 72 6 0.72619 136 8 0.57407 52 4 0.79870 62 5 0.79689 218 9 0.76628 150 9 0.70892 223 9 0.54286 28 2 0.81261 60 6 0.67176 139 9 0.73052 41 2 0.83096 70 7 0.73301 225 9 0.77148 50 2 0.79894 23 2 0.66206 140 9 0.71044 159 9 0.69831 147 9 0.76276 248 9 0.56097 135 8 0.72568 97 8 0.68631 221 9 0.82828 47 3 0.49185 82 6 0.60272 189 9 0.71566 250 9 0.75006 295 9 0.71291 209 9 0.71057 234 9 0.73067 260 9 0.77107 0.76412 0.63655 0.81272 0.75907 0.73078 0.65990 0.72418 0.78858 0.66970 0.77653 0.59682 0.76001 0.80709 0.78949 0.74895 0.83455 0.80060 0.78237 0.76561 0.75875 0.84227 0.73439 0.79479 0.84529 0.74149 0.79780 0.78089 0.75289 0.77860 0.78143 0.78920 0.62061 0.72848 0.67356 0.88147 0.61485 0.69061 0.77390 0.79021 0.76782 0.75143 0.77085 2 0.71761 0.74962 -0.0197432 9 0.65977 0.71171 -0.051945 0.89923 0.108345 insignificant 1 1 insignificant 0.98680 0.024171 weaklyHypometh 1 1 insignificant -0.040316 0.22215 insignificant 1 insignificant 0.71792 0.64202 0.078287 9 0.68812 0.70811 -0.019988 0.00074585 0.99967 weaklyHypermeth 0.033902 1 weaklyHypermeth 0.132263 0.99703 insignificant 1.0000 1 insignificant 0.037524 0.51372 insignificant 1 insignificant 0.71793 0.71474 -0.029131 9 0.69527 0.73250 -0.037228 0.984277 0.134898 insignificant 1 1 insignificant 0.96282 0.194366 insignificant 1 1 insignificant -0.037145 0.1356780 insignificant 1.00000 insignificant 0.74962 0.64156 0.098667 9 0.71171 0.68157 0.0301398 1.0619e-06 0.99945 weaklyHypermeth 8.2014e-05 1 weaklyHypermeth 0.0037897 0.99743 weaklyHypermeth 0.27070 1 insignificant 0.0778399 0.19639 insignificant 1 insignificant 0.75038 0.71474 -0.0081149 9 0.72172 0.73250 -0.0107763 0.77846 0.54843 insignificant 1 1 insignificant 0.41224 0.90792 insignificant 1 1 insignificant 0.0031707 0.896980 insignificant 1 insignificant 0.64016 0.71474 -0.108251 9 0.61081 0.73250 -0.1216878 1.00000 4.2210e-06 weaklyHypometh 1 0.0020514 weaklyHypometh 0.99973 0.0069724 weaklyHypometh 1 0.58104 insignificant -0.0746692 0.19474 insignificant 1 insignificant chr8 68008904 68009904 85558 SNORD87 ENSG00000201719 0.68111 180 8 0.56310 183 9 0.55262 116 6 0.75658 116 6 0.56584 79 5 0.63141 297 8 0.47976 103 6 0.78571 167 9 0.54992 94 5 0.60554 122 8 0.82481 222 6 0.68058 54 3 0.83357 129 6 0.48333 19 2 0.58171 79 5 0.46497 56 3 0.49085 276 7 0.79682 118 5 0.77310 99 6 0.72937 232 8 0.71591 56 5 0.72871 77 6 0.43766 85 6 0.64288 79 6 0.75628 77 5 0.69042 186 6 0.76853 85 6 0.61243 64 4 0.71093 130 8 0.75692 197 6 0.75296 152 6 0.71486 296 9 0.64230 148 6 0.73849 103 5 0.65579 152 3 0.60123 58 5 0.77204 84 6 0.76279 170 9 0.80079 136 6 0.70718 174 9 0.63487 107 6 0.70298 127 5 0.62562 141 6 0.70865 0.62721 0.61377 0.74140 0.65196 0.73907 0.67319 0.74933 0.59954 0.63362 0.75475 0.70019 0.75404 0.66202 0.68965 0.62568 0.60370 0.72567 0.63878 0.78005 0.73120 0.75678 0.61769 0.71522 0.69657 0.75613 0.77473 0.71773 0.70763 0.74137 0.71615 0.69698 0.63918 0.55024 0.59199 0.46703 0.71553 0.78582 0.76994 0.78526 0.70754 0.68729 0.72612 3 0.68953 0.71765 -0.0221784 6 0.65572 0.70260 -0.046882 0.87463 0.054023 insignificant 1 1 insignificant 0.93037 0.136105 insignificant 1 1 insignificant -0.049172 0.21291 insignificant 1 insignificant 0.68953 0.65455 0.042714 6 0.65572 0.69580 -0.040079 0.14534801 0.19822 insignificant 1.000000 1 insignificant 0.307558 0.17310 insignificant 1.0000 1 insignificant -0.053906 0.20135 insignificant 1 insignificant 0.68953 0.75328 -0.042071 5 0.65572 0.69852 -0.042797 0.837744 0.024322 weaklyHypometh 1 1 insignificant 0.71823 0.056237 insignificant 1 1 insignificant -0.052752 0.2350233 insignificant 1.00000 insignificant 0.71765 0.65455 0.067186 6 0.70260 0.69580 0.0068023 7.5460e-02 0.73882 insignificant 1.0000e+00 1 insignificant 0.1981838 0.59628 insignificant 1.00000 1 insignificant -0.0047336 0.90659 insignificant 1 insignificant 0.71765 0.75328 -0.0164588 5 0.70260 0.69852 0.0040849 0.50178 0.15374 insignificant 1 1 insignificant 0.69154 0.25544 insignificant 1 1 insignificant -0.0035791 0.932640 insignificant 1 insignificant 0.65455 0.75328 -0.087087 5 0.69580 0.69852 -0.0027174 0.43593 4.1653e-02 weaklyHypometh 1 1.0000000 insignificant 0.41434 0.0299806 weaklyHypometh 1 1.00000 insignificant 0.0011544 0.97915 insignificant 1 insignificant chr8 74494354 74495354 86008 RPL7 A,ENSG00000147604 0.74453 94 6 0.620878 148 11 0.48517 148 11 0.70370 79 6 0.45384 139 8 0.82925 183 10 0.59974 135 11 0.73844 163 8 0.53402 107 10 0.52316 80 6 0.72918 240 11 0.64978 78 8 0.733291 131 9 0.55556 11 1 0.75138 84 7 0.70062 62 5 0.63557 40 3 0.40062 77 4 0.89354 67 5 0.64609 139 6 0.47997 56 5 0.668000 62 5 0.64610 106 7 0.48562 63 8 0.80455 45 1 0.71531 255 11 0.49648 102 10 0.47411 40 3 0.62123 82 6 0.75177 230 10 0.77901 238 11 0.58255 206 8 0.25935 162 8 0.073632 82 7 0.2222222 116 6 0.25641 34 2 0.22464 113 10 0.084097 223 11 0.74692 89 5 0.677352 87 5 0.74937 71 4 0.42477 70 3 0.69556 99 7 0.73820 0.524896 0.43886 0.74800 0.44192 0.76826 0.49140 0.61140 0.47519 0.55250 0.70477 0.51138 0.615960 NA 0.60182 0.55091 0.48189 0.44416 0.79287 0.69363 0.60412 0.59047 0.64345 0.72476 0.67364 0.69150 0.38807 0.49510 0.49913 0.66798 0.69777 0.58517 0.31478 0.13864 0.390833 0.25215 0.43946 0.076382 0.67673 0.62657 0.52667 0.34417 0.55366 1 0.63719 0.64305 -0.0224125 10 0.60340 0.66146 -0.058069 0.79298 0.15140 insignificant 1 1 insignificant 0.44336 0.723115 insignificant 1 1 insignificant 0.02102672 0.64654 insignificant 1 insignificant 0.63719 0.29726 0.405286 10 0.60340 0.16637 0.437023 1.4487e-42 1.00000 hypermethylated 1.4487e-39 1 hypermethylated 1.8863e-17 1.00000 hypermethylated 1.8863e-14 1 hypermethylated 0.4596940 1.9604e-07 hypermethylated 0.00019604 hypermethylated 0.63719 0.62740 0.0038411 4 0.60340 0.64976 -0.046365 0.04742214 0.06652554 lowCoverage 1.000000 1.00000 lowCoverage 0.29801223 0.07771154 lowCoverage 1.00000 1.00000 lowCoverage -0.012376 0.8586868 lowCoverage 1.0000 lowCoverage 0.64305 0.29726 0.437878 10 0.66146 0.16637 0.495092 2.3809e-39 1.00000 hypermethylated 2.3809e-36 1 hypermethylated 2.4112e-13 1.00000 hypermethylated 2.4112e-10 1 hypermethylated 0.438667 4.2681e-07 hypermethylated 0.00042681 hypermethylated 0.64305 0.62740 0.0089237 4 0.66146 0.64976 0.0117041 0.0607831 0.019949 lowCoverage 1.00000 1 lowCoverage 0.426264 0.033299 lowCoverage 1 1 lowCoverage -0.0334022 0.6467602 lowCoverage 1 lowCoverage 0.29726 0.62740 -0.409316 4 0.16637 0.64976 -0.483388 0.99334 1.4486e-22 lowCoverage 1 1.4486e-19 lowCoverage 0.99697 8.4328e-09 lowCoverage 1 8.4328e-06 lowCoverage -0.4720695 0.00034645 lowCoverage 0.11548 lowCoverage chr8 76451196 76452196 86120 CRISPLD1 A,ENSG00000121005 0.84622 261 6 0.900321 161 6 0.73162 158 9 0.90064 216 6 0.91970 88 5 0.80389 361 8 0.78794 79 7 0.88126 157 6 0.86928 210 8 0.85817 135 8 0.89511 208 6 0.81250 61 3 0.912190 207 8 0.89313 109 7 0.88795 195 8 0.76429 52 4 1.00000 42 2 0.94452 358 6 0.86845 203 4 0.83573 246 6 0.86039 70 5 0.875646 88 5 0.84823 149 8 0.77420 82 5 0.85494 135 5 0.90514 223 9 0.87889 94 5 0.85579 97 5 0.82904 179 5 0.94464 231 8 0.85267 195 6 0.89708 250 6 0.67389 165 8 0.681969 92 4 0.6583414 172 5 0.48846 59 3 0.69345 139 6 0.839782 173 6 0.93626 232 6 0.924519 180 6 0.94417 242 6 0.91030 290 6 0.87532 176 6 0.87096 0.859706 0.79022 0.89746 0.90596 0.88308 0.77722 0.88880 0.86993 0.89729 0.85297 0.75214 0.922016 0.91660 0.89013 0.86049 0.90893 0.91636 0.88850 0.87940 0.84917 0.86647 0.86777 0.83682 0.92655 0.88155 0.87620 0.87934 0.86980 0.93637 0.91192 0.85706 0.69963 0.75592 0.417753 0.70028 0.76367 0.836230 0.93570 0.90074 0.93094 0.92174 0.84120 3 0.88049 0.87786 -0.0148906 6 0.86631 0.88798 -0.021672 0.92687 0.12637 insignificant 1 1 insignificant 0.87769 0.209598 insignificant 1 1 insignificant 0.00092502 0.96082 insignificant 1 insignificant 0.88052 0.70625 0.161930 5 0.87968 0.66717 0.212512 5.9943e-09 0.99998 weaklyHypermeth 8.5633e-07 1 weaklyHypermeth 1.6463e-06 0.99983 weaklyHypermeth 4.1159e-04 1 weaklyHypermeth 0.1929977 6.8482e-03 weaklyHypermeth 1.00000000 insignificant 0.88049 0.94286 -0.0478423 6 0.86631 0.93963 -0.073321 0.99992146 0.00095834 weaklyHypometh 1.000000 0.47917 insignificant 0.99978594 0.00177252 weaklyHypometh 1.00000 0.35450 insignificant -0.052468 0.0124815 weaklyHypometh 1.0000 insignificant 0.87786 0.70713 0.170165 5 0.88798 0.74130 0.146685 2.0870e-07 1.00000 weaklyHypermeth 2.9814e-05 1 weaklyHypermeth 4.6354e-06 0.99996 weaklyHypermeth 1.1588e-03 1 weaklyHypermeth 0.192073 7.3221e-03 weaklyHypermeth 1.00000000 insignificant 0.87786 0.94286 -0.0324463 6 0.88798 0.93963 -0.0516488 0.9993648 0.047638 weaklyHypometh 1.00000 1 insignificant 0.999877 0.034004 weaklyHypometh 1 1 insignificant -0.0533927 0.0092128 weaklyHypometh 1 insignificant 0.70713 0.94286 -0.209041 5 0.74130 0.93963 -0.198334 1.00000 1.9861e-05 hypomethylated 1 3.3101e-03 hypomethylated 1.00000 1.6383e-05 hypomethylated 1 8.1914e-03 hypomethylated -0.2454654 0.00237217 weaklyHypometh 0.59304 insignificant chr8 79502658 79503658 86655 A,ENSG00000211431 0.82433 441 14 0.787612 320 14 0.76310 202 13 0.81888 209 11 0.83475 158 13 0.80250 355 14 0.79193 139 12 0.80425 229 13 0.74993 129 12 0.82005 165 10 0.80309 449 14 0.71234 134 11 0.797463 298 13 0.73106 23 2 0.77126 194 14 0.68635 97 8 0.66723 84 6 0.79234 268 14 0.79669 346 14 0.85182 387 14 0.76950 97 10 0.903919 81 5 0.79830 300 14 0.73666 97 10 0.85873 100 8 0.78734 426 14 0.85957 177 14 0.69448 47 5 0.75430 318 10 0.82624 393 11 0.79405 391 14 0.83058 620 14 0.80245 316 10 0.695362 314 14 0.7671064 275 14 0.79394 55 8 0.80873 96 12 0.784505 444 14 0.80244 297 12 0.842566 380 14 0.86386 256 12 0.83047 290 11 0.84532 284 11 0.84999 0.769939 0.80352 0.84061 0.86551 0.83739 0.81333 0.86264 0.82431 0.83428 0.83125 0.76791 0.782397 NA 0.80046 0.72288 0.74825 0.80768 0.82101 0.85003 0.77576 0.85959 0.81746 0.76888 0.83586 0.80835 0.88627 0.72058 0.77708 0.82503 0.81444 0.84826 0.81449 0.70460 0.770515 0.82440 0.78642 0.823220 0.82059 0.88016 0.87351 0.84216 0.86425 5 0.81305 0.84903 -0.0087258 14 0.80054 0.81261 -0.012067 0.77113 0.13560 insignificant 1 1 insignificant 0.68712 0.066511 insignificant 1 1 insignificant -0.02079080 0.31436 insignificant 1 insignificant 0.81305 0.81800 0.032705 14 0.80054 0.77427 0.026276 3.5538e-02 0.99879 weaklyHypermeth 1.0000e+00 1 insignificant 2.9920e-01 0.92067 insignificant 1.0000e+00 1 insignificant 0.0050011 8.1044e-01 insignificant 1.00000000 insignificant 0.81305 0.80624 -0.0371947 14 0.80054 0.83472 -0.034175 0.99767382 0.01879920 weaklyHypometh 1.000000 1.00000 insignificant 0.99955942 0.00071896 weaklyHypometh 1.00000 0.35450 insignificant -0.056582 0.0018606 weaklyHypometh 0.6202 insignificant 0.84903 0.81800 0.040874 14 0.81261 0.77427 0.038343 2.3834e-04 0.99872 weaklyHypermeth 1.9862e-02 1 weaklyHypermeth 8.7650e-03 0.99557 weaklyHypermeth 7.5646e-01 1 insignificant 0.025792 3.0179e-01 insignificant 1.00000000 insignificant 0.84903 0.80624 -0.0290507 14 0.81261 0.83472 -0.0221082 0.9519745 0.057519 insignificant 1.00000 1 insignificant 0.991726 0.048524 weaklyHypometh 1 1 insignificant -0.0357913 0.0896529 insignificant 1 insignificant 0.81800 0.80624 -0.066747 14 0.77427 0.83472 -0.060451 0.99995 4.6095e-04 weaklyHypometh 1 5.1217e-02 weaklyHypometh 0.99998 1.8782e-03 weaklyHypometh 1 2.3477e-01 insignificant -0.0615832 0.01482634 weaklyHypometh 1.00000 insignificant chr8 80902208 80903208 86705 HEY1 A,ENSG00000164683 0.30275 124 7 0.075835 121 7 0.10533 150 7 0.22322 187 7 0.17641 103 7 0.43754 217 7 0.20788 134 7 0.29359 220 7 0.16341 253 7 0.30533 164 7 0.42308 197 7 0.25893 75 7 0.086419 219 7 0.29073 154 7 0.11104 231 7 0.37867 97 7 0.10667 25 4 0.27950 252 7 0.29048 74 4 0.25847 263 7 0.26667 30 3 0.093283 136 7 0.36187 67 4 0.18930 93 6 0.30238 45 5 0.28311 210 7 0.20066 129 6 0.22866 91 7 0.28809 127 7 0.10303 249 7 0.19192 195 7 0.25152 256 7 0.11796 151 7 0.127872 72 7 0.0055556 134 5 0.22222 48 5 0.13201 97 7 0.128968 200 7 0.13278 197 7 0.083333 193 7 0.20478 235 7 0.09465 207 7 0.14624 187 7 0.30896 0.098587 0.11270 0.25797 0.17719 0.44027 0.24360 0.28157 0.19266 0.35409 0.43286 0.29061 0.093925 0.32248 0.12151 0.38745 0.22514 0.18754 0.17789 0.15509 0.21349 0.10879 0.33950 0.10583 0.35530 0.29644 0.20036 0.13442 0.22164 0.09182 0.20062 0.26046 0.12759 0.16489 0.032294 0.19109 0.16989 0.167045 0.14377 0.11128 0.11901 0.10188 0.17390 6 0.24509 0.20025 0.0334915 7 0.26208 0.27478 -0.012701 0.20964 0.77182 insignificant 1 1 insignificant 0.25642 0.675899 insignificant 1 1 insignificant 0.00872215 0.79595 insignificant 1 insignificant 0.24446 0.12393 0.095348 7 0.22809 0.13016 0.097930 1.7473e-04 0.99840 weaklyHypermeth 1.5885e-02 1 weaklyHypermeth 6.6350e-04 0.99998 weaklyHypermeth 7.3723e-02 1 weaklyHypermeth 0.1163314 7.8439e-03 weaklyHypermeth 1.00000000 insignificant 0.24509 0.14931 0.1044087 7 0.26208 0.22315 0.038935 0.00021452 0.99612487 weaklyHypermeth 0.053629 1.00000 weaklyHypermeth 0.00020755 0.99868934 weaklyHypermeth 0.10377 1.00000 insignificant 0.106406 0.0049300 weaklyHypermeth 1.0000 insignificant 0.19741 0.12393 0.057856 7 0.19159 0.13016 0.061425 3.5567e-03 0.96770 weaklyHypermeth 2.5405e-01 1 insignificant 2.1567e-02 0.99673 weaklyHypermeth 1.0000e+00 1 insignificant 0.107609 1.2336e-02 weaklyHypermeth 1.00000000 insignificant 0.20025 0.14931 0.0745707 7 0.27478 0.22315 0.0516357 0.0022969 0.995973 weaklyHypermeth 0.38282 1 insignificant 0.030714 0.997028 weaklyHypermeth 1 1 insignificant 0.0976840 0.0087581 weaklyHypermeth 1 insignificant 0.12393 0.14848 0.022313 7 0.13016 0.11217 0.017996 0.22347 8.9060e-01 insignificant 1 1.0000e+00 insignificant 0.74364 6.3128e-01 insignificant 1 1.0000e+00 insignificant -0.0099253 0.78595237 insignificant 1.00000 insignificant chr8 83963214 83964214 86905 HNRNPA1P4 A,ENSG00000206228 0.56210 197 7 0.559335 135 7 0.59836 116 7 0.72381 154 7 0.53508 68 6 0.64770 256 7 0.63058 86 7 0.62017 155 7 0.69062 71 7 0.59589 82 6 0.69516 251 7 0.57199 61 3 0.657135 81 7 0.58000 28 5 0.57132 85 4 0.26776 48 4 0.59743 40 3 0.64457 140 7 0.63713 136 7 0.61569 237 7 0.74966 48 4 0.743672 97 7 0.58021 114 7 0.66001 62 7 0.65762 62 7 0.65226 195 7 0.51088 64 7 0.66667 30 3 0.63472 100 7 0.61557 205 7 0.60187 199 7 0.66333 278 7 0.52877 120 7 0.615809 120 7 0.6832988 177 7 0.73413 39 3 0.52297 75 7 0.544329 198 7 0.58712 163 7 0.648959 175 7 0.63116 187 7 0.62177 157 7 0.68459 198 7 0.62741 0.605526 0.68424 0.76559 0.58687 0.67486 0.69421 0.64820 0.67423 0.67687 0.72299 0.59291 0.694822 0.59808 0.60427 0.41752 0.62329 0.68793 0.69946 0.65843 0.75622 0.80029 0.63594 0.73039 0.66415 0.68393 0.55907 0.65741 0.64030 0.65674 0.63668 0.70785 0.56518 0.62412 0.682149 0.71644 0.56522 0.576684 0.65570 0.68575 0.66842 0.71382 0.70513 3 0.64854 0.66162 -0.0175068 7 0.62190 0.64102 -0.019115 0.96287 0.31042 insignificant 1 1 insignificant 0.98944 0.090496 insignificant 1 1 insignificant -0.04461471 0.12192 insignificant 1 insignificant 0.64854 0.59945 0.040660 7 0.62190 0.59068 0.031223 4.1827e-02 0.95957 weaklyHypermeth 1.0000e+00 1 insignificant 1.9775e-01 0.67637 insignificant 1.0000e+00 1 insignificant -0.0047927 9.1100e-01 insignificant 1.00000000 insignificant 0.64854 0.67841 -0.0294380 7 0.62190 0.64774 -0.025835 0.92015862 0.13890756 insignificant 1.000000 1.00000 insignificant 0.92516972 0.24510773 insignificant 1.00000 1.00000 insignificant -0.034628 0.2024847 insignificant 1.0000 insignificant 0.66162 0.59945 0.058297 7 0.64102 0.59068 0.050338 1.4277e-03 0.99531 weaklyHypermeth 1.0983e-01 1 insignificant 2.7455e-02 0.96521 weaklyHypermeth 1.0000e+00 1 insignificant 0.039822 3.5765e-01 insignificant 1.00000000 insignificant 0.66162 0.67841 -0.0145521 7 0.64102 0.64774 -0.0067194 0.4769679 0.328640 insignificant 1.00000 1 insignificant 0.282143 0.723004 insignificant 1 1 insignificant 0.0099863 0.6929332 insignificant 1 insignificant 0.59945 0.67841 -0.072060 7 0.59068 0.64774 -0.057058 0.92746 1.5623e-03 weaklyHypometh 1 1.3019e-01 insignificant 0.78230 3.1454e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0298357 0.47545444 insignificant 1.00000 insignificant chr8 93522133 93523133 87398 ENSG00000200820 0.90212 111 5 0.85929 118 5 0.72095 40 3 0.78750 109 5 0.52381 19 2 0.86430 185 5 0.72768 23 3 0.90950 94 5 0.48810 34 3 0.91711 44 3 0.85684 142 5 0.33333 10 0 0.82500 91 4 0.65880 25 3 0.81012 46 3 0.41667 14 2 0.77778 9 0 0.82761 114 5 0.85550 92 5 0.87074 122 5 0.76667 21 1 0.853801 30 2 0.76517 45 4 0.86558 61 3 0.87143 63 4 0.87309 149 5 0.87033 53 4 0.82143 15 1 0.98846 72 3 0.86680 153 5 0.89259 134 5 0.70905 121 5 0.71414 106 5 0.79661 61 5 0.85907 80 3 0.77778 9 0 0.72805 47 5 0.730949 158 5 0.804350 87 5 0.85073 90 5 0.919843 128 5 0.843810 53 3 0.874412 124 5 0.90237 0.77327 0.55929 0.66422 0.63134 0.84878 0.63422 0.87419 0.69739 0.91444 0.85373 0.49462 0.84677 0.67957 0.73122 0.45806 0.82796 0.84668 0.76601 0.81952 0.69892 0.886814 0.74597 0.81580 0.89862 0.82863 0.90134 0.73733 0.98511 0.83544 0.84000 0.83337 0.79581 0.68411 0.83776 0.82796 0.55174 0.847477 0.729627 0.81142 0.896572 0.79846 0.845746 1 0.84535 0.87895 -0.0202890 5 0.77415 0.80586 -0.0317139 0.71474 0.25865 insignificant 1 1 insignificant 0.84476 0.185593 insignificant 1 1 insignificant -0.0987303 0.033030 lowCoverage 1 lowCoverage 0.84535 0.85900 -0.0040336 5 0.77415 0.70848 0.065669 2.4067e-01 0.51481 insignificant 1.0000e+00 1 insignificant 0.25614476 0.41603 insignificant 1.000000 1 insignificant -0.021130 0.641105 lowCoverage 1 lowCoverage 0.84690 0.885892 -0.026712 5 0.84898 0.866847 -0.017870 8.8299e-01 0.302768 insignificant 1.0000e+00 1 insignificant 8.6123e-01 0.325373 insignificant 1.0000e+00 1 insignificant -0.111992 1.6178e-02 lowCoverage 1.0000e+00 lowCoverage 0.87895 0.85900 0.014102 5 0.80586 0.70848 0.097383 8.9266e-02 0.54867 insignificant 1.0000000 1 insignificant 0.1413066 0.52938 insignificant 1.00000 1 insignificant 0.077600 0.024972 lowCoverage 1 lowCoverage 0.87978 0.885892 -0.0113032 5 0.86703 0.866847 0.00018689 7.1612e-01 0.294665 insignificant 1.00000000 1 insignificant 5.8923e-01 0.411680 insignificant 1.0000e+00 1 insignificant -0.013261 0.64644387 lowCoverage 1.00000 lowCoverage 0.86275 0.885892 -0.017587 5 0.85017 0.866847 -0.016673 0.7369862 0.29987589 insignificant 1 1.000000 insignificant 0.7411611 0.4278721 insignificant 1 1.00000 insignificant -0.090861 0.012940 lowCoverage 0.92429 lowCoverage chr8 93627669 93628669 87435 ENSG00000200820 0.76094 213 6 0.73615 196 6 0.68377 159 6 0.71844 82 6 0.74374 107 6 0.76774 230 6 0.63424 184 6 0.73801 143 6 0.72461 124 6 0.78809 105 5 0.79729 223 6 0.68304 175 6 0.78645 202 6 NA 0 0 0.82152 119 6 0.72540 81 6 0.71341 125 6 0.67364 82 6 0.77083 197 6 0.77706 182 6 0.73715 77 5 0.677579 41 6 0.74858 140 6 0.64261 58 4 0.71429 31 3 0.71983 217 6 0.72892 80 6 0.81498 52 4 0.71917 143 6 0.80603 214 6 0.73281 212 6 0.76519 270 6 0.67670 178 6 0.70898 167 6 0.69915 85 5 0.64286 33 3 0.74590 92 6 0.739074 239 6 0.766744 211 6 0.76860 200 6 0.710791 98 6 0.795767 127 6 0.806652 152 6 0.77375 0.74960 0.70527 0.72491 0.74599 0.78472 0.65555 0.74847 0.75133 0.80894 0.79966 0.70125 0.80661 NA 0.84360 0.72836 0.70465 0.69748 0.78978 0.80179 0.76336 0.717114 0.76355 0.66736 0.74014 0.73488 0.76616 0.82195 0.73850 0.81827 0.75801 0.76873 0.69708 0.75226 0.74056 0.63801 0.77278 0.756652 0.787549 0.78560 0.722608 0.82443 0.826196 5 0.74565 0.76156 -0.0038925 6 0.74346 0.74719 -0.0037308 0.69882 0.40743 insignificant 1 1 insignificant 0.56390 0.296164 insignificant 1 1 insignificant 0.0052494 0.769394 insignificant 1 insignificant 0.74565 0.73048 0.0249269 6 0.74346 0.70746 0.035994 1.1035e-02 0.80950 weaklyHypermeth 3.5595e-01 1 insignificant 0.01608471 0.52263 weaklyHypermeth 0.618643 1 insignificant 0.037066 0.082331 insignificant 1 insignificant 0.74565 0.748731 -0.026167 6 0.74346 0.769039 -0.025584 7.0761e-01 0.040450 weaklyHypometh 1.0000e+00 1 insignificant 7.4777e-01 0.029830 weaklyHypometh 1.0000e+00 1 insignificant -0.030533 1.6456e-01 insignificant 1.0000e+00 insignificant 0.76156 0.73048 0.028500 6 0.74719 0.70746 0.039725 2.7241e-03 0.65221 weaklyHypermeth 0.0908029 1 weaklyHypermeth 0.0098914 0.31618 weaklyHypermeth 0.36635 1 insignificant 0.031816 0.155261 insignificant 1 insignificant 0.76156 0.748731 -0.0211848 6 0.74719 0.769039 -0.02185357 9.0273e-01 0.052216 insignificant 1.00000000 1 insignificant 9.1271e-01 0.201927 insignificant 1.0000e+00 1 insignificant -0.035783 0.12984743 insignificant 1.00000 insignificant 0.73048 0.748731 -0.051630 6 0.70746 0.769039 -0.061578 0.5821335 0.00022129 weaklyHypometh 1 0.020118 weaklyHypometh 0.4906792 0.0014135 weaklyHypometh 1 0.18239 insignificant -0.067599 0.016755 weaklyHypometh 0.97628 insignificant chr8 93665511 93666511 87442 ENSG00000200820 0.96462 86 5 0.85096 133 5 0.88269 50 3 0.95221 104 5 0.98182 31 3 0.90704 187 5 0.97143 36 3 0.91209 64 4 0.95238 40 3 1.00000 9 1 0.94485 146 5 0.85000 16 0 1.00000 24 3 0.80952 28 3 0.82381 24 3 0.95238 19 3 NA 0 0 0.78182 30 1 0.93939 19 1 0.96876 147 5 0.85000 15 2 1.000000 2 0 0.91455 47 5 0.97333 57 3 0.91667 10 1 0.97128 120 5 0.74702 26 3 0.70769 29 3 1.00000 24 1 0.97631 141 5 1.00000 87 5 0.92887 134 5 0.89190 99 5 0.70000 9 0 1.00000 106 3 0.90000 10 2 0.82206 151 5 0.913507 82 5 0.972700 119 5 0.98636 115 5 0.935714 148 5 1.000000 8 1 0.886281 121 3 0.93548 0.86235 0.83747 0.97984 0.94135 0.90282 0.90783 0.84852 0.91897 1.00000 0.93338 0.83871 1.00000 0.76037 0.85714 0.97696 NA 0.94135 0.88270 0.94168 0.92097 0.933304 0.81466 0.91398 0.97688 0.93962 0.84735 0.70223 1.00000 0.97965 1.00000 0.89353 0.90641 0.90323 1.00000 NA 0.82623 0.888472 1.000000 1.00000 0.951613 0.97446 0.874552 0 0.91450 0.93488 -0.0221899 3 0.91906 0.94896 -0.0299027 0.96680 0.10080 lowCoverage 1 1 lowCoverage 0.98420 0.074861 lowCoverage 1 1 lowCoverage 0.0027213 0.933967 lowCoverage 1 lowCoverage 0.91450 0.89497 0.0220879 5 0.91906 0.88866 0.030396 3.3055e-02 0.66290 weaklyHypermeth 1.0000e+00 1 insignificant 0.16998111 0.83447 insignificant 1.000000 1 insignificant 0.046954 0.325388 lowCoverage 1 lowCoverage 0.91450 0.953033 -0.040061 3 0.91906 0.947211 -0.028156 9.5849e-01 0.061032 lowCoverage 1.0000e+00 1 lowCoverage 7.2153e-01 0.222635 lowCoverage 1.0000e+00 1 lowCoverage -0.038014 1.7091e-01 lowCoverage 1.0000e+00 lowCoverage 0.93488 0.89497 0.040904 3 0.94896 0.88866 0.060299 7.3783e-03 0.87827 lowCoverage 0.2305722 1 lowCoverage 0.0256792 0.96961 lowCoverage 0.85597 1 lowCoverage 0.044233 0.399830 lowCoverage 1 lowCoverage 0.93488 0.953033 -0.0168292 1 0.94896 0.947211 0.00174721 5.3236e-01 0.581954 lowCoverage 1.00000000 1 lowCoverage 3.0687e-02 0.630795 lowCoverage 1.0000e+00 1 lowCoverage -0.040735 0.26514247 lowCoverage 1.00000 lowCoverage 0.89497 0.953033 -0.077995 3 0.88866 0.947211 -0.058551 0.9613854 0.01251864 lowCoverage 1 0.544289 lowCoverage 0.9922150 0.1687117 lowCoverage 1 1.00000 lowCoverage -0.084968 0.107095 lowCoverage 1.00000 lowCoverage chr8 94410201 94411201 87612 ENSG00000214950 0.73474 65 5 0.37324 141 5 0.57209 72 5 0.66407 79 5 0.50833 29 5 0.50949 174 5 0.40952 37 5 0.69712 84 5 0.81481 40 5 0.53968 35 5 0.60286 162 5 0.62500 18 2 0.77030 64 5 0.69583 23 1 0.72727 52 5 0.35000 8 0 0.50000 9 0 0.67715 110 5 0.51571 46 3 0.67099 128 5 0.46296 17 0 0.724359 49 5 0.71277 70 5 0.55455 56 5 0.72667 29 5 0.68261 116 5 0.59737 47 5 0.57058 39 5 0.59004 63 5 0.58610 107 5 0.63528 134 5 0.53155 160 5 0.49066 56 5 0.36343 45 5 0.64175 73 5 0.62500 8 0 0.63946 57 5 0.436204 108 5 0.608081 68 5 0.67895 99 5 0.742103 79 5 0.578636 49 5 0.662148 110 5 0.74703 0.61272 0.64265 0.68434 0.53069 0.64116 0.43697 0.73491 0.86667 0.66218 0.73726 0.68684 0.64374 0.60863 0.69305 0.38529 0.53529 0.69595 0.54392 0.75684 0.44902 0.685520 0.72929 0.57398 0.73490 0.70665 0.61859 0.62143 0.61176 0.71734 0.77745 0.68569 0.51556 0.44984 0.61463 0.66153 0.65462 0.539938 0.714973 0.69693 0.757577 0.59864 0.679585 0 0.67224 0.66967 -0.0091271 5 0.61408 0.58474 0.0293461 0.50103 0.48567 insignificant 1 1 insignificant 0.71566 0.737084 insignificant 1 1 insignificant -0.0166591 0.665227 lowCoverage 1 lowCoverage 0.67134 0.56772 0.1067335 5 0.56094 0.57156 -0.010620 2.3652e-04 0.95712 weaklyHypermeth 1.0284e-02 1 weaklyHypermeth 0.04012923 0.93446 weaklyHypermeth 1.000000 1 insignificant 0.065162 0.283067 lowCoverage 1 lowCoverage 0.67544 0.674074 -0.014077 5 0.66843 0.598185 0.070242 7.8142e-01 0.611616 insignificant 1.0000e+00 1 insignificant 9.4572e-01 0.494772 insignificant 1.0000e+00 1 insignificant -0.056072 1.9380e-01 lowCoverage 1.0000e+00 lowCoverage 0.67159 0.56772 0.119030 5 0.62105 0.57156 0.049498 4.4984e-05 0.98575 weaklyHypermeth 0.0028115 1 weaklyHypermeth 0.0207635 0.95262 weaklyHypermeth 0.71598 1 insignificant 0.081821 0.173628 lowCoverage 1 lowCoverage 0.67157 0.674074 -0.0054472 5 0.62193 0.598185 0.02374672 8.7559e-01 0.812425 insignificant 1.00000000 1 insignificant 9.6903e-01 0.727989 insignificant 1.0000e+00 1 insignificant -0.039413 0.31572075 lowCoverage 1.00000 lowCoverage 0.57143 0.674185 -0.125358 5 0.62515 0.563944 0.061206 0.9998906 0.00127908 weaklyHypometh 1 0.075240 weaklyHypometh 0.9938736 0.0051466 weaklyHypometh 1 0.36365 insignificant -0.121234 0.065008 lowCoverage 1.00000 lowCoverage chr8 96774470 96775470 87769 ENSG00000223297 0.83173 266 5 0.63449 144 6 0.33455 49 5 0.89769 263 7 0.55000 16 0 0.86954 300 7 0.75325 30 2 0.78707 76 5 0.55693 74 5 0.69616 65 5 0.85325 178 7 0.45000 15 0 0.85464 169 5 0.89683 42 5 0.76001 90 5 0.58333 24 2 0.48333 15 0 0.68309 391 6 0.87316 133 5 0.83333 226 7 0.83667 30 4 0.670315 122 5 0.85848 97 5 0.55857 50 5 0.85118 147 5 0.76995 149 5 0.65368 95 5 0.54444 26 2 0.75339 119 5 0.84087 167 5 0.83014 143 7 0.77869 226 7 0.64771 155 7 0.63677 152 5 1.00000 26 1 0.45536 80 4 0.22419 76 5 0.635620 199 7 0.815192 213 5 0.77357 271 7 0.776730 380 7 0.776422 167 5 0.824057 361 7 0.76265 0.66596 0.31833 0.85500 0.61339 0.81708 0.54620 0.71607 0.54425 0.72965 0.84742 0.33607 0.78192 0.86316 0.73737 0.52754 0.43989 0.58993 0.81726 0.77571 0.88087 0.649634 0.82482 0.62049 0.76049 0.75111 0.74764 0.37705 0.74972 0.82186 0.76999 0.74119 0.55007 0.79439 NA 0.45697 0.26378 0.671796 0.793736 0.77607 0.688241 0.76213 0.748010 1 0.74318 0.75638 -0.0140351 5 0.78662 0.75247 0.0341514 0.94086 0.67450 insignificant 1 1 insignificant 0.92470 0.704471 insignificant 1 1 insignificant -0.0364129 0.469357 lowCoverage 1 lowCoverage 0.74336 0.63517 0.1063784 5 0.79041 0.58977 0.200636 1.1029e-08 0.19894 weaklyHypermeth 1.0026e-06 1 weaklyHypermeth 0.00028293 0.27593 weaklyHypermeth 0.031504 1 weaklyHypermeth 0.109176 0.361138 lowCoverage 1 lowCoverage 0.74336 0.767241 -0.017597 5 0.79041 0.802912 -0.012505 8.4361e-01 0.479855 insignificant 1.0000e+00 1 insignificant 4.6440e-01 0.315788 insignificant 1.0000e+00 1 insignificant -0.084076 4.2956e-02 lowCoverage 1.0000e+00 lowCoverage 0.75713 0.63517 0.123492 5 0.78924 0.58977 0.199468 2.2084e-05 0.40701 weaklyHypermeth 0.0015909 1 weaklyHypermeth 0.0022905 0.54512 weaklyHypermeth 0.17619 1 insignificant 0.145589 0.231513 lowCoverage 1 lowCoverage 0.75713 0.767241 -0.0036087 5 0.78924 0.802912 -0.01367354 7.8849e-01 0.600933 insignificant 1.00000000 1 insignificant 7.1883e-01 0.684264 insignificant 1.0000e+00 1 insignificant -0.047663 0.18784428 insignificant 1.00000 insignificant 0.63517 0.767241 -0.131446 5 0.58977 0.802912 -0.213141 0.6975903 0.00121097 weaklyHypometh 1 0.075240 weaklyHypometh 0.9034250 0.0040036 weaklyHypometh 1 0.33363 insignificant -0.193252 0.123766 lowCoverage 1.00000 lowCoverage chr8 96774604 96775604 87770 ENSG00000223297 0.83173 266 5 0.63449 144 6 0.33455 49 5 0.89769 263 7 0.55000 16 0 0.86954 300 7 0.75325 30 2 0.78707 76 5 0.55693 74 5 0.69616 65 5 0.85325 178 7 0.45000 15 0 0.85464 169 5 0.89683 42 5 0.76001 90 5 0.58333 24 2 0.48333 15 0 0.68309 391 6 0.87316 133 5 0.83333 226 7 0.83667 30 4 0.670315 122 5 0.85848 97 5 0.55857 50 5 0.85118 147 5 0.76995 149 5 0.65368 95 5 0.54444 26 2 0.75339 119 5 0.84087 167 5 0.83014 143 7 0.77869 226 7 0.64771 155 7 0.63677 152 5 1.00000 26 1 0.45536 80 4 0.22419 76 5 0.635620 199 7 0.815192 213 5 0.77357 271 7 0.776730 380 7 0.776422 167 5 0.824057 361 7 0.76265 0.66596 0.31833 0.85500 0.61339 0.81708 0.54620 0.71607 0.54425 0.72965 0.84742 0.33607 0.78192 0.86316 0.73737 0.52754 0.43989 0.58993 0.81726 0.77571 0.88087 0.649634 0.82482 0.62049 0.76049 0.75111 0.74764 0.37705 0.74972 0.82186 0.76999 0.74119 0.55007 0.79439 NA 0.45697 0.26378 0.671796 0.793736 0.77607 0.688241 0.76213 0.748010 1 0.74318 0.75638 -0.0140351 5 0.78662 0.75247 0.0341514 0.94086 0.67450 insignificant 1 1 insignificant 0.92470 0.704471 insignificant 1 1 insignificant -0.0364129 0.469357 lowCoverage 1 lowCoverage 0.74336 0.63517 0.1063784 5 0.79041 0.58977 0.200636 1.1029e-08 0.19894 weaklyHypermeth 1.0026e-06 1 weaklyHypermeth 0.00028293 0.27593 weaklyHypermeth 0.031504 1 weaklyHypermeth 0.109176 0.361138 lowCoverage 1 lowCoverage 0.74336 0.767241 -0.017597 5 0.79041 0.802912 -0.012505 8.4361e-01 0.479855 insignificant 1.0000e+00 1 insignificant 4.6440e-01 0.315788 insignificant 1.0000e+00 1 insignificant -0.084076 4.2956e-02 lowCoverage 1.0000e+00 lowCoverage 0.75713 0.63517 0.123492 5 0.78924 0.58977 0.199468 2.2084e-05 0.40701 weaklyHypermeth 0.0015909 1 weaklyHypermeth 0.0022905 0.54512 weaklyHypermeth 0.17619 1 insignificant 0.145589 0.231513 lowCoverage 1 lowCoverage 0.75713 0.767241 -0.0036087 5 0.78924 0.802912 -0.01367354 7.8849e-01 0.600933 insignificant 1.00000000 1 insignificant 7.1883e-01 0.684264 insignificant 1.0000e+00 1 insignificant -0.047663 0.18784428 insignificant 1.00000 insignificant 0.63517 0.767241 -0.131446 5 0.58977 0.802912 -0.213141 0.6975903 0.00121097 weaklyHypometh 1 0.075240 weaklyHypometh 0.9034250 0.0040036 weaklyHypometh 1 0.33363 insignificant -0.193252 0.123766 lowCoverage 1.00000 lowCoverage chr8 98313490 98314490 87895 ENSG00000104324 0.54923 140 5 0.48727 102 6 0.42135 156 6 0.37442 112 5 0.32551 57 5 0.38770 264 5 0.32325 99 5 0.35372 116 5 0.35617 141 5 0.41504 121 4 0.65551 103 5 0.43047 80 5 0.15782 133 5 0.38889 14 1 0.39377 91 5 0.61949 89 5 0.35388 77 5 0.32233 134 5 0.14758 70 2 0.23286 256 5 0.55333 39 5 0.083954 128 5 0.46086 94 5 0.53989 62 4 0.39536 63 5 0.12496 156 6 0.32584 82 4 0.31667 58 3 0.34403 82 3 0.16816 192 6 0.37884 136 5 0.73439 271 5 0.30486 146 6 0.27609 41 3 0.50000 48 4 0.22333 43 5 0.42794 65 5 0.064366 148 6 0.057531 208 5 0.15118 194 6 0.046975 111 3 0.093087 174 3 0.076147 178 5 0.57037 0.44437 0.49956 0.33804 0.31555 0.39961 0.27871 0.34776 0.32387 0.39030 0.65125 0.46298 0.11777 0.23749 0.30749 0.61913 0.30061 0.37787 0.23292 0.26083 0.43099 0.080703 0.45863 0.49066 0.33352 0.16669 0.39423 0.27110 0.35817 0.17089 0.29190 0.70136 0.40577 0.25079 0.79330 0.13566 0.37829 0.072404 0.051148 0.12082 0.037369 0.10823 0.071255 2 0.36476 0.36244 0.0070962 5 0.38486 0.35738 0.0274716 0.38845 0.77172 insignificant 1 1 insignificant 0.38570 0.939583 insignificant 1 1 insignificant 0.0159555 0.798872 lowCoverage 1 lowCoverage 0.36476 0.27088 0.1012984 5 0.38486 0.25486 0.129999 2.4295e-06 0.95052 weaklyHypermeth 1.2787e-04 1 weaklyHypermeth 0.00138665 0.77815 weaklyHypermeth 0.086666 1 weaklyHypermeth 0.085381 0.255200 lowCoverage 1 lowCoverage 0.36476 0.079769 0.300297 5 0.38486 0.080037 0.304819 8.3151e-15 1.000000 hypermethylated 8.3151e-12 1 hypermethylated 6.0946e-09 1.000000 hypermethylated 6.0946e-06 1 hypermethylated 0.299828 1.7383e-08 lowCoverage 1.7383e-05 lowCoverage 0.36244 0.27088 0.090408 5 0.35738 0.25486 0.102527 1.6749e-02 0.91408 weaklyHypermeth 0.4926064 1 insignificant 0.0073763 0.71649 weaklyHypermeth 0.32566 1 insignificant 0.069426 0.419883 lowCoverage 1 lowCoverage 0.36244 0.079769 0.2865240 5 0.35738 0.080037 0.27734751 1.5255e-06 1.000000 hypermethylated 0.00025425 1 hypermethylated 6.7207e-08 1.000000 hypermethylated 6.7207e-05 1 hypermethylated 0.283872 0.00026236 lowCoverage 0.06559 lowCoverage 0.27088 0.079769 0.202043 5 0.25486 0.080037 0.174820 0.0094295 0.99660151 weaklyHypermeth 1 1.000000 insignificant 0.0047233 0.9442340 weaklyHypermeth 1 1.00000 insignificant 0.214447 0.017573 lowCoverage 0.97628 lowCoverage chr8 100036953 100037953 87993 OSR2 ENSG00000164920 0.91492 308 6 0.81879 125 6 0.75611 86 6 0.88215 165 6 0.81986 81 6 0.63712 254 6 0.84017 77 6 0.82868 135 6 0.80851 73 5 0.80321 71 6 0.75155 172 6 0.73579 75 5 0.91698 131 6 0.46667 10 1 0.90464 98 6 0.96111 52 5 0.70561 58 5 0.70849 133 6 0.75443 170 6 0.75034 343 6 0.62173 165 5 0.847527 85 6 0.81493 163 6 0.78776 108 5 0.86706 46 6 0.87239 133 6 0.79500 121 6 0.70107 112 5 0.84206 112 6 0.82527 147 6 0.77481 119 6 0.80535 252 6 0.69218 140 6 0.66348 73 6 0.51979 99 6 0.87619 29 4 0.66450 256 5 0.833770 122 6 0.879803 605 6 0.91265 230 6 0.862163 189 6 0.863256 150 6 0.843740 258 6 0.91994 0.85047 0.77940 0.88337 0.84924 0.81369 0.86326 0.78981 0.80139 0.87367 0.81998 0.73487 0.90475 0.85876 0.90767 0.92081 0.77766 0.85488 0.81546 0.84554 0.84012 0.845581 0.82276 0.80817 0.85761 0.89923 0.80599 0.69720 0.85990 0.87822 0.80987 0.85834 0.83975 0.70196 0.70066 0.82521 0.72464 0.839975 0.888777 0.88384 0.880813 0.85370 0.871147 5 0.83722 0.82726 0.0153139 6 0.76653 0.76522 0.0013087 0.14389 0.40879 insignificant 1 1 insignificant 0.20817 0.382054 insignificant 1 1 insignificant -0.0079910 0.807753 insignificant 1 insignificant 0.83722 0.75243 0.0852569 6 0.76653 0.49162 0.274907 3.5994e-04 0.99999 weaklyHypermeth 1.4998e-02 1 weaklyHypermeth 0.00205363 0.99989 weaklyHypermeth 0.120801 1 insignificant 0.079937 0.211512 insignificant 1 insignificant 0.83722 0.892458 -0.031625 6 0.76653 0.911323 -0.144790 9.9968e-01 0.026956 weaklyHypometh 1.0000e+00 1 insignificant 9.9910e-01 0.161372 insignificant 1.0000e+00 1 insignificant -0.084067 5.7687e-03 weaklyHypometh 8.2805e-01 insignificant 0.82726 0.75243 0.071160 6 0.76522 0.49162 0.273599 7.0942e-04 0.99798 weaklyHypermeth 0.0283768 1 weaklyHypermeth 0.0080070 0.99703 weaklyHypermeth 0.32566 1 insignificant 0.087928 0.167761 insignificant 1 insignificant 0.82726 0.892458 -0.0443681 6 0.76522 0.911323 -0.14609910 9.9987e-01 0.154891 insignificant 1.00000000 1 insignificant 9.9640e-01 0.059103 insignificant 1.0000e+00 1 insignificant -0.076076 0.00598500 weaklyHypometh 0.74812 insignificant 0.75243 0.892458 -0.114872 6 0.49162 0.911323 -0.419698 1.0000000 0.00012248 weaklyHypometh 1 0.012248 weaklyHypometh 1.0000000 0.0050694 weaklyHypometh 1 0.36365 insignificant -0.164005 0.025784 weaklyHypometh 1.00000 insignificant chr8 106224615 106225710 88300 LRP12 ENSG00000147650 0.91634 352 7 0.94591 299 7 0.82259 86 9 0.98012 323 7 0.89033 67 6 0.93866 435 9 0.85859 70 9 0.90652 170 9 0.89731 99 4 0.96199 114 6 0.93015 294 9 0.91667 24 4 0.98254 177 6 0.86111 58 4 0.98958 138 6 0.80000 20 4 0.91667 20 0 0.89976 397 6 0.87778 85 7 0.86103 242 9 0.67632 48 6 0.83428 89 6 0.92430 99 7 0.88337 73 7 0.95735 73 7 0.96143 328 9 0.98765 53 5 0.98462 51 4 0.88147 189 7 0.93910 383 9 0.92489 448 9 0.91917 349 9 0.86070 299 9 0.92466 118 7 0.88988 325 9 0.75000 16 0 0.87778 137 9 0.92029 244 9 0.92620 312 7 0.91552 298 7 0.92460 448 7 0.89261 205 4 0.90449 290 7 0.97210 0.94333 0.66382 0.95540 0.93266 0.95839 0.93603 0.95757 0.84983 0.94158 0.94052 0.92222 0.95831 0.94074 0.98542 0.81630 0.87222 0.90141 1.00000 0.96655 0.37051 0.92164 0.86382 0.86120 0.93064 0.96826 0.97366 0.98063 0.81811 0.94997 0.96020 0.96940 0.90195 0.93769 0.76915 0.76667 0.87638 0.93038 0.88768 0.94100 0.92500 0.89251 0.79742 4 0.93343 0.92991 0.0045068 7 0.87551 0.92639 -0.0508805 0.42363 0.6846333 insignificant 1 1 insignificant 0.076505 0.933418 insignificant 1 1 insignificant 0.0015189 0.956040 insignificant 1 insignificant 0.93368 0.86567 0.0682367 7 0.91723 0.87289 0.044340 3.1130e-05 0.60878 weaklyHypermeth 1.9456e-03 1 weaklyHypermeth 3.7664e-02 0.90037 weaklyHypermeth 1.00000000 1 insignificant 0.037131 0.234187 insignificant 1 insignificant 0.93368 0.90084 0.038026 7 0.91723 0.92772 -0.010487 0.040892 0.8009064 weaklyHypermeth 1 1 insignificant 0.0059377 0.945138 weaklyHypermeth 1 1 insignificant -0.0050019 0.707608 insignificant 1 insignificant 0.92988 0.86567 0.061064 8 0.91821 0.87289 0.045318 5.4539e-03 0.32901 weaklyHypermeth 2.7270e-01 1 insignificant 3.2637e-01 0.40421 insignificant 1.00000000 1 insignificant 0.035612 0.3383873 insignificant 1.00000 insignificant 0.92988 0.90084 0.030600 7 0.91821 0.92772 -0.0095087 0.225305 0.178932 insignificant 1 1 insignificant 0.307472 0.80042 insignificant 1 1 insignificant -0.0065208 0.801234 insignificant 1 insignificant 0.86567 0.90084 -0.03446515 7 0.87289 0.92772 -0.0548272 0.39080 1.3949e-01 insignificant 1 1.0000e+00 insignificant 0.47068 6.5855e-01 insignificant 1 1.000000 insignificant -0.042133 0.1716056 insignificant 1 insignificant chr8 106572336 106573336 88355 ZFPM2 ENSG00000169946 0.87842 61 5 0.88673 189 5 0.64738 136 5 0.87500 15 0 0.85599 69 5 0.91545 93 5 0.85005 93 5 0.87528 95 5 0.93860 114 5 0.97048 101 5 0.92265 92 5 0.94833 42 5 0.97811 180 5 NA 0 0 0.93314 108 5 0.95000 29 2 0.74176 59 4 0.97143 30 5 0.96011 134 5 0.97947 76 4 0.96349 44 4 1.00000 6 0 0.94572 112 5 0.84768 59 5 1.00000 2 0 0.99636 202 4 0.93500 67 5 1.00000 19 1 0.91584 199 5 0.96672 167 5 0.96724 183 4 0.89124 126 4 0.25840 250 5 0.32861 78 5 0.84375 131 2 0.75000 10 0 0.47273 47 5 0.59329 249 4 0.93333 41 4 0.93602 57 4 0.88095 26 4 0.93333 32 3 0.92500 23 2 0.83788 0.91982 0.70150 0.87736 0.83095 0.88551 0.85580 0.85338 0.94799 0.98922 0.91678 0.92689 0.96903 NA 0.95337 0.92925 0.93147 0.97035 0.94592 0.97393 0.95463 0.97814 0.94993 0.84496 0.97814 0.99623 0.94340 1.00000 0.93176 0.97223 0.96613 0.94245 0.32382 0.36005 0.69435 0.71698 0.51252 0.54733 0.96541 0.91323 0.89039 1.00000 0.92487 0 0.90152 0.95531 -0.0525173 5 0.89748 0.94869 -0.0512119 0.99961 0.0025608 weaklyHypometh 1 1 insignificant 0.980992 0.018418 weaklyHypometh 1 1 insignificant -0.0535773 0.033090 lowCoverage 1 lowCoverage 0.90152 0.50588 0.4053533 5 0.89748 0.46220 0.435283 2.1519e-23 1.00000 hypermethylated 2.1519e-20 1 hypermethylated 6.1448e-07 1.00000 hypermethylated 0.00030724 1 hypermethylated 0.357736 0.011949 lowCoverage 1 lowCoverage 0.90152 0.92179 -0.022195 4 0.89748 0.90902 -0.011534 0.708954 0.1767667 lowCoverage 1 1 lowCoverage 0.8386139 0.083608 lowCoverage 1 1 lowCoverage -0.0228638 0.310947 lowCoverage 1 lowCoverage 0.95531 0.50588 0.463408 5 0.94869 0.46220 0.486495 2.7957e-21 1.00000 hypermethylated 2.7957e-18 1 hypermethylated 7.2582e-07 1.00000 hypermethylated 0.00036291 1 hypermethylated 0.411313 0.0069514 lowCoverage 0.99306 lowCoverage 0.95531 0.92179 0.033648 4 0.94869 0.90902 0.0396784 0.066302 0.911437 lowCoverage 1 1 lowCoverage 0.641441 0.56733 lowCoverage 1 1 lowCoverage 0.0307135 0.098229 lowCoverage 1 lowCoverage 0.50588 0.92179 -0.43974221 4 0.46220 0.90902 -0.4468162 1.00000 8.0517e-09 lowCoverage 1 2.6839e-06 lowCoverage 1.00000 8.0041e-05 lowCoverage 1 0.040021 lowCoverage -0.380599 0.0097890 lowCoverage 1 lowCoverage chr8 111381822 111382822 88722 KCNV1 ENSG00000164794 0.84049 224 8 0.79197 72 4 0.84259 64 4 0.81392 172 8 0.70130 29 2 0.76816 235 8 0.74153 37 2 0.90000 63 4 0.50071 35 2 0.97054 99 4 0.84844 81 4 0.93929 21 2 0.85647 42 3 NA 0 0 0.81487 58 4 0.72222 16 1 0.47727 28 3 0.82175 182 8 0.68231 87 8 0.79697 314 8 0.78571 30 3 0.89594 69 7 0.82244 58 4 0.73878 51 3 0.95363 49 3 0.80040 128 8 0.77021 90 7 0.87500 10 1 0.75037 54 4 0.76032 173 8 0.75607 142 8 0.81114 267 8 0.78847 52 4 0.74882 60 4 0.67494 92 7 0.77143 26 4 0.58077 22 2 0.69948 186 8 0.82340 207 8 0.83749 193 8 0.83908 220 8 0.85553 145 8 0.85218 216 8 0.90145 0.80724 0.69950 0.93276 0.98507 0.79797 0.74970 0.79851 0.75957 0.97279 0.97973 0.92431 0.84302 NA 0.89995 0.82504 0.74383 0.85735 0.75544 0.86797 0.92351 0.94444 0.89264 0.82965 0.93820 0.87084 0.83152 0.91791 0.87777 0.87716 0.87085 0.86906 0.76872 0.70404 0.75751 0.85416 0.70459 0.71677 0.90878 0.88144 0.90082 0.90585 0.92198 1 0.80796 0.80464 -0.0080654 8 0.82460 0.75573 0.0688725 0.70897 0.3694474 insignificant 1 1 insignificant 0.825122 0.395191 insignificant 1 1 insignificant -0.0294342 0.405298 lowCoverage 1 lowCoverage 0.80775 0.70320 0.1006297 8 0.80511 0.71753 0.087585 1.5389e-06 0.99946 weaklyHypermeth 1.7099e-04 1 weaklyHypermeth 9.2748e-03 0.96444 weaklyHypermeth 0.57967396 1 insignificant 0.069916 0.123703 lowCoverage 1 lowCoverage 0.80775 0.85015 -0.054264 8 0.80511 0.85499 -0.049882 0.999694 0.0581664 insignificant 1 1 insignificant 0.9973602 0.233111 insignificant 1 1 insignificant -0.0609669 0.053428 lowCoverage 1 lowCoverage 0.80518 0.70320 0.109491 8 0.78414 0.71753 0.066615 6.2362e-09 0.98754 weaklyHypermeth 1.0394e-06 1 weaklyHypermeth 6.5610e-04 0.97187 weaklyHypermeth 0.10935067 1 insignificant 0.099350 0.0245501 lowCoverage 1.00000 lowCoverage 0.80518 0.85015 -0.045319 8 0.78414 0.85499 -0.0708518 0.986917 0.039767 weaklyHypometh 1 1 insignificant 0.880697 0.56868 insignificant 1 1 insignificant -0.0315327 0.140080 insignificant 1 insignificant 0.70320 0.85015 -0.15219743 8 0.71753 0.85499 -0.1374671 1.00000 5.8170e-09 weaklyHypometh 1 2.6839e-06 weaklyHypometh 0.99422 5.3344e-04 weaklyHypometh 1 0.133359 insignificant -0.130883 0.0081026 lowCoverage 1 lowCoverage chr8 115195519 115196519 88823 ENSG00000206719 0.73318 97 6 0.79205 142 7 0.67421 58 4 0.78407 67 5 0.77293 65 4 0.70646 228 7 0.54924 34 3 0.82552 98 6 0.71652 49 2 0.83565 75 5 0.81590 169 7 0.94286 46 4 0.85360 115 4 NA 0 0 0.91790 86 6 0.68750 20 2 0.58681 37 2 0.66456 95 6 0.74596 181 6 0.71762 168 7 0.70000 39 5 0.62302 50 6 0.87338 81 7 0.88690 37 4 0.72000 15 2 0.61800 140 5 0.74176 68 5 0.62222 25 2 0.76295 109 6 0.79599 140 7 0.78055 145 7 0.77013 226 7 0.71079 121 6 0.67678 98 7 0.64795 156 7 0.35119 22 3 0.73095 27 3 0.81343 142 7 0.75055 70 4 0.68440 85 6 0.70162 54 4 0.71706 38 5 0.75464 89 6 0.67505 0.83495 0.78024 0.62551 0.84436 0.60145 0.69004 0.81567 0.78993 0.85500 0.81855 0.91064 0.87655 NA 0.91489 0.81095 0.74645 0.70445 0.86427 0.58523 0.77660 0.52340 0.82478 0.82801 0.75726 0.80408 0.68271 0.59043 0.82098 0.76144 0.76796 0.67791 0.80604 0.68926 0.74951 0.45282 0.54681 0.76859 0.69688 0.68458 0.77130 0.71201 0.66763 2 0.77760 0.75814 0.0182525 7 0.77806 0.77619 0.0018726 0.36902 0.4725012 insignificant 1 1 insignificant 0.193786 0.626237 insignificant 1 1 insignificant 0.0125754 0.722069 lowCoverage 1 lowCoverage 0.77760 0.72615 0.0512984 6 0.77806 0.72289 0.055176 9.7217e-02 0.99470 insignificant 1.0000e+00 1 insignificant 2.5610e-02 0.99639 weaklyHypermeth 1.00000000 1 insignificant 0.098635 0.200557 lowCoverage 1 lowCoverage 0.77760 0.73214 0.047499 4 0.77806 0.71498 0.063082 0.030520 0.7566649 lowCoverage 1 1 lowCoverage 0.0257954 0.917517 lowCoverage 1 1 lowCoverage 0.0321622 0.246247 lowCoverage 1 lowCoverage 0.75814 0.72615 0.032241 6 0.77619 0.72289 0.053304 9.9624e-02 0.97437 insignificant 1.0000e+00 1 insignificant 1.2671e-01 0.99746 insignificant 1.00000000 1 insignificant 0.086060 0.2609269 insignificant 1.00000 insignificant 0.75814 0.73214 0.014364 4 0.77619 0.71498 0.0612095 0.022402 0.337540 lowCoverage 1 1 lowCoverage 0.084852 0.70399 lowCoverage 1 1 lowCoverage 0.0195868 0.516542 insignificant 1 insignificant 0.72615 0.73214 0.00024552 4 0.72289 0.71498 0.0079057 0.42139 5.3495e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.69740 4.8349e-01 lowCoverage 1 1.000000 lowCoverage -0.066473 0.3594478 insignificant 1 insignificant chr8 115618002 115619002 88832 ENSG00000206719 0.68516 208 5 0.81091 74 5 0.40000 37 5 0.97246 165 5 0.86458 44 5 0.79026 183 7 0.64391 77 5 0.86923 37 5 0.82143 39 5 0.84375 34 1 0.78365 206 5 0.70833 23 0 0.86531 48 7 0.69388 22 1 0.96044 64 5 0.93333 10 1 0.31250 11 1 0.77991 113 7 0.87500 62 5 0.58323 122 6 0.64841 48 5 0.97143 31 4 0.94524 33 1 0.95000 16 1 0.95595 96 5 0.91000 59 5 0.79274 38 5 0.61376 19 1 0.70359 64 5 0.70398 72 5 0.79792 59 5 0.72304 118 5 0.51463 45 5 0.54854 55 5 0.70603 297 5 0.30000 6 0 0.52135 119 7 0.83476 92 5 0.94617 291 5 0.80996 158 5 0.79471 327 5 0.69388 63 1 0.89505 243 5 0.93934 0.86413 0.54545 0.96140 0.96717 0.95373 0.92536 0.86364 0.96212 0.96212 0.88614 0.89899 0.94372 0.94372 0.90956 0.86869 NA 0.88915 1.00000 0.90963 0.86953 0.97835 0.98030 0.90152 0.95970 0.91970 0.94444 0.94372 0.91866 0.92691 0.82576 0.90190 0.72359 0.56867 0.78596 0.34848 0.73087 0.85278 0.93956 0.91168 0.94575 0.94372 0.97169 1 0.87754 0.89740 -0.0080875 5 0.70767 0.66437 0.0433053 0.78478 0.7797828 insignificant 1 1 insignificant 0.700598 0.894921 insignificant 1 1 insignificant -0.0498075 0.365298 lowCoverage 1 lowCoverage 0.87865 0.70521 0.1782899 5 0.78630 0.56516 0.221149 5.9248e-10 0.99999 weaklyHypermeth 1.4812e-07 1 weaklyHypermeth 3.7957e-07 1.00000 weaklyHypermeth 0.00030724 1 weaklyHypermeth 0.188978 0.055256 lowCoverage 1 lowCoverage 0.87867 0.94547 -0.026934 5 0.75382 0.79695 -0.043129 0.830248 0.2213704 insignificant 1 1 insignificant 0.3984155 0.891218 insignificant 1 1 insignificant -0.0680891 0.265739 lowCoverage 1 lowCoverage 0.90015 0.70521 0.179522 5 0.73819 0.56516 0.173032 4.0013e-12 0.99843 weaklyHypermeth 1.3338e-09 1 weaklyHypermeth 6.3118e-07 0.99841 weaklyHypermeth 0.00036291 1 weaklyHypermeth 0.238785 0.0223987 lowCoverage 1.00000 lowCoverage 0.90248 0.94547 -0.017611 5 0.75862 0.79695 -0.0383268 0.939221 0.200799 insignificant 1 1 insignificant 0.639023 0.89124 insignificant 1 1 insignificant -0.0182816 0.757987 lowCoverage 1 lowCoverage 0.70588 0.94547 -0.21989407 5 0.58377 0.79695 -0.2131772 0.99973 4.6894e-10 hypomethylated 1 4.6894e-07 hypomethylated 0.99817 7.2207e-05 hypomethylated 1 0.040021 hypomethylated -0.257067 0.0181796 lowCoverage 1 lowCoverage chr8 116792705 116793705 88980 TRPS1 ENSG00000104447 0.76788 371 10 0.77573 168 10 0.69452 100 10 0.81042 202 10 0.76253 72 6 0.79453 354 10 0.78053 97 9 0.65293 143 9 0.73643 76 7 0.71920 144 10 0.73109 312 10 0.69870 59 6 0.80632 124 10 0.76667 26 2 0.81933 134 10 0.65021 63 4 0.71376 61 6 0.78770 208 10 0.69900 160 10 0.78037 240 10 0.79816 53 5 0.85864 97 7 0.81451 157 8 0.76156 97 9 0.89286 50 6 0.72095 273 10 0.87914 92 6 0.47392 25 3 0.78716 169 10 0.80159 174 10 0.82137 186 10 0.77577 341 10 0.71017 130 9 0.72538 115 9 0.76939 205 10 0.70599 64 6 0.80537 80 7 0.83295 195 10 0.78396 270 10 0.78936 233 10 0.81870 235 10 0.75739 274 10 0.81133 310 10 0.81441 0.82657 0.77089 0.85574 0.79043 0.82711 0.83112 0.72485 0.77998 0.80526 0.77180 0.82822 0.82736 0.84479 0.87664 0.66003 0.79153 0.81168 0.74114 0.82096 0.77629 0.82757 0.82430 0.74821 0.88974 0.84249 0.85145 0.53857 0.82424 0.83972 0.86889 0.82855 0.76970 0.74667 0.78731 0.81337 0.81105 0.83728 0.86472 0.85723 0.87458 0.82555 0.86259 3 0.77938 0.79813 -0.0191718 10 0.71340 0.79997 -0.0865684 0.95756 0.0358251 weaklyHypometh 1 1 insignificant 0.863700 0.032392 weaklyHypometh 1 1 insignificant -0.0347431 0.315385 insignificant 1 insignificant 0.77917 0.77440 0.0034844 10 0.68735 0.78533 -0.097983 1.8789e-01 0.29790 insignificant 1.0000e+00 1 insignificant 3.5924e-01 0.19424 insignificant 1.00000000 1 insignificant -0.010816 0.669621 insignificant 1 insignificant 0.77942 0.82829 -0.042014 10 0.75608 0.79441 -0.038326 0.976635 0.0092914 weaklyHypometh 1 1 insignificant 0.9058092 0.024714 weaklyHypometh 1 1 insignificant -0.0447547 0.012772 weaklyHypometh 1 insignificant 0.79813 0.77440 0.020381 10 0.79997 0.78533 0.014637 7.0365e-02 0.82796 insignificant 1.0000e+00 1 insignificant 2.9259e-01 0.89086 insignificant 1.00000000 1 insignificant 0.023927 0.5390447 insignificant 1.00000 insignificant 0.79765 0.82829 -0.018425 10 0.77996 0.79441 -0.0144434 0.511764 0.288016 insignificant 1 1 insignificant 0.403054 0.21986 insignificant 1 1 insignificant -0.0100115 0.767686 insignificant 1 insignificant 0.77411 0.82829 -0.04283806 10 0.76386 0.79441 -0.0305442 0.87924 8.7999e-02 insignificant 1 1.0000e+00 insignificant 0.89137 1.9631e-01 insignificant 1 1.000000 insignificant -0.033939 0.2022241 insignificant 1 insignificant chr8 117664316 117665316 89166 ENSG00000221793 0.70936 126 7 0.42964 184 6 0.53438 62 3 0.71733 124 7 0.56120 103 8 0.71602 152 5 0.65709 130 6 0.59658 104 6 0.67154 65 3 0.61355 94 5 0.56312 160 8 0.48258 61 4 0.58541 137 8 0.82101 79 5 0.61555 110 6 0.60764 41 4 0.71087 280 6 0.68540 127 6 0.69518 62 3 0.57887 138 6 0.53631 44 5 0.63267 81 5 0.55446 113 7 0.66916 106 6 0.66408 64 6 0.63825 123 8 0.54210 81 6 0.61293 65 6 0.71178 110 8 0.66147 112 4 0.63406 137 6 0.56329 180 6 0.55588 143 7 0.67906 83 6 0.50234 118 4 0.738095 21 2 0.58557 96 8 0.59286 133 6 0.75999 133 5 0.60990 122 5 0.61334 124 8 0.75461 94 6 0.66603 120 7 0.86384 0.65691 0.74949 0.78112 0.60061 0.82784 0.79752 0.72315 0.81453 0.78597 0.80120 0.71511 0.73374 0.83266 0.69984 0.74579 0.83773 0.77294 0.89757 0.76771 0.67790 0.80716 0.73832 0.73801 0.68977 0.81333 0.73996 0.74554 0.81986 0.75319 0.78588 0.79238 0.56159 0.62741 0.69578 0.515152 0.60709 0.71311 0.83144 0.75032 0.70633 0.83217 0.78849 2 0.75215 0.72593 0.0033484 5 0.63939 0.63370 0.0056837 0.4655935 0.793996 insignificant 1 1 insignificant 0.462112 0.801453 insignificant 1 1 insignificant 0.0092357 0.728489 insignificant 1 insignificant 0.75150 0.64310 0.099167 5 0.63501 0.62713 0.0078852 2.0653e-04 0.83418 weaklyHypermeth 1.2908e-02 1 weaklyHypermeth 4.5766e-03 0.63897 weaklyHypermeth 2.8603e-01 1 insignificant 0.0186486 0.6566117 insignificant 1.00000 insignificant 0.75215 0.79188 -0.014201 7 0.63939 0.66376 -0.024367 0.809439 0.196574 insignificant 1 1.000 insignificant 0.79746 2.0192e-01 insignificant 1 1.000000 insignificant -0.053160 0.2092993 insignificant 1 insignificant 0.72593 0.64250 0.089768 5 0.63370 0.58052 0.0531871 7.6530e-04 0.86727 weaklyHypermeth 3.8265e-02 1 weaklyHypermeth 1.0419e-02 0.68318 weaklyHypermeth 0.49091241 1 insignificant 0.009413 0.8140825 insignificant 1.00000 insignificant 0.72533 0.79223 -0.01610080 5 0.56329 0.70112 -0.137823 0.837207 0.0445264 weaklyHypometh 1 1.00000 insignificant 0.90303 0.061101 insignificant 1 1 insignificant -0.062395 0.138971 insignificant 1 insignificant 0.64250 0.79188 -0.113307 5 0.58052 0.66376 -0.083238 0.99369 2.3966e-03 weaklyHypometh 1 1.4979e-01 insignificant 0.98513 4.3688e-03 weaklyHypometh 1 0.451271 insignificant -0.071808 0.16821102 insignificant 1.00000 insignificant chr8 121750218 121751218 89482 MTBP ENSG00000172167 0.76861 424 15 0.75590 372 17 0.63750 225 17 0.81297 260 11 0.71284 121 14 0.74756 524 17 0.74581 175 11 0.72623 298 17 0.74679 174 12 0.77485 228 13 0.79535 592 17 0.80452 92 7 0.73900 359 17 0.72449 44 6 0.77674 219 17 0.64116 92 8 0.83779 108 11 0.63392 267 15 0.77300 421 17 0.77734 439 16 0.76256 91 7 0.77632 112 8 0.79282 303 15 0.85735 109 12 0.81771 67 8 0.69219 502 17 0.85212 156 10 0.78177 68 5 0.77771 291 17 0.78665 560 17 0.73525 455 17 0.79599 622 17 0.65971 355 17 0.71815 292 17 0.65602 303 17 0.736459 83 7 0.73097 181 13 0.74371 550 17 0.76652 310 13 0.87743 446 15 0.82714 273 12 0.84185 264 9 0.86276 242 9 0.78441 0.73997 0.60404 0.79133 0.70845 0.78348 0.75332 0.75374 0.71673 0.77934 0.76411 0.82453 0.78662 0.68067 0.78861 0.63551 0.85187 0.73063 0.76069 0.82295 0.76443 0.81298 0.78573 0.88778 0.83126 0.74688 0.79272 0.79434 0.76907 0.73677 0.77537 0.80943 0.69150 0.68060 0.66571 0.722731 0.73520 0.72689 0.77641 0.83898 0.79243 0.81799 0.82556 2 0.78193 0.82884 -0.0197096 17 0.74295 0.75836 -0.0154095 0.9952361 0.060356 insignificant 1 1 insignificant 0.994397 0.016465 weaklyHypometh 1 1 insignificant -0.0390848 0.040608 weaklyHypometh 1 insignificant 0.78189 0.75397 0.059370 17 0.73010 0.65942 0.0706827 2.9772e-06 0.99999 weaklyHypermeth 2.2902e-04 1 weaklyHypermeth 2.1313e-03 0.99832 weaklyHypermeth 1.8634e-01 1 insignificant 0.0391150 0.0797868 insignificant 1.00000 insignificant 0.78798 0.77003 -0.050151 15 0.73122 0.85875 -0.127527 0.999998 0.000036 weaklyHypometh 1 0.036 weaklyHypometh 1.00000 8.4775e-05 weaklyHypometh 1 0.084775 weaklyHypometh -0.088522 0.0049822 weaklyHypometh 1 insignificant 0.82879 0.75397 0.078977 17 0.74628 0.65942 0.0868626 1.4172e-08 1.00000 weaklyHypermeth 2.0245e-06 1 weaklyHypermeth 1.9274e-04 1.00000 weaklyHypermeth 0.02753440 1 weaklyHypermeth 0.078200 0.0028531 weaklyHypermeth 0.37355 insignificant 0.83722 0.77003 -0.02968832 15 0.74572 0.85875 -0.113028 0.998727 0.0122391 weaklyHypometh 1 1.00000 insignificant 0.99478 0.059748 insignificant 1 1 insignificant -0.049437 0.066268 insignificant 1 insignificant 0.76582 0.77003 -0.108772 15 0.66029 0.85875 -0.198458 1.00000 2.1073e-07 weaklyHypometh 1 7.0242e-05 weaklyHypometh 1.00000 2.5759e-05 weaklyHypometh 1 0.010433 weaklyHypometh -0.127637 0.00082905 weaklyHypometh 0.35795 insignificant chr8 126415112 126416112 89640 ENSG00000208579,ENSG00000222813 0.83752 226 9 0.88805 92 5 0.60000 59 5 0.83485 189 9 0.95208 43 2 0.83333 204 9 0.86111 48 2 0.93864 42 5 0.96296 47 2 0.90252 56 5 0.91124 174 8 0.72222 30 2 0.90529 89 5 NA 0 0 0.91313 77 9 0.65657 22 1 0.83333 19 0 0.87212 310 9 0.77761 110 9 0.91638 206 9 0.87698 28 3 0.86994 73 6 0.72083 116 5 0.69091 49 5 0.87061 70 8 0.81500 201 8 0.82664 64 5 0.96296 25 2 0.73152 74 5 0.84133 128 9 0.81546 132 9 0.84197 264 9 0.84444 59 5 0.84289 92 9 0.79188 207 9 0.737037 32 4 0.86218 39 2 0.78946 164 9 0.87669 184 9 0.90273 288 8 0.85675 283 9 0.93590 151 8 0.83994 225 8 0.89594 0.89952 0.81769 0.92221 0.93368 0.89297 0.93155 0.87491 0.99603 0.88945 0.92909 0.83333 0.93628 NA 0.95173 0.91017 0.96152 0.91509 0.92463 0.94449 0.86480 0.90881 0.89196 0.96970 0.85731 0.87033 0.88634 0.95635 0.82546 0.94440 0.88657 0.88346 0.92381 0.88594 0.85640 0.834921 0.87120 0.84853 0.90637 0.92083 0.89869 0.96024 0.92422 1 0.88932 0.84967 0.0323838 9 0.82720 0.81202 0.0151830 0.0047939 0.984061 weaklyHypermeth 1 1 insignificant 0.042032 0.977267 weaklyHypermeth 1 1 insignificant 0.0263535 0.410010 insignificant 1 insignificant 0.88971 0.83137 0.058162 9 0.86356 0.79900 0.0645534 1.2293e-06 0.99176 weaklyHypermeth 1.2420e-04 1 weaklyHypermeth 2.1317e-03 0.87078 weaklyHypermeth 1.8634e-01 1 insignificant 0.0370522 0.2261119 insignificant 1.00000 insignificant 0.88932 0.88594 -0.007020 8 0.82720 0.88637 -0.059166 0.837086 0.576741 insignificant 1 1.000 insignificant 0.65783 7.4829e-01 insignificant 1 1.000000 insignificant -0.034037 0.2431050 insignificant 1 insignificant 0.85012 0.83137 0.029585 9 0.82817 0.79900 0.0291649 2.6206e-03 0.63538 weaklyHypermeth 9.7058e-02 1 weaklyHypermeth 5.6765e-02 0.45196 insignificant 1.00000000 1 insignificant 0.010699 0.7193527 insignificant 1.00000 insignificant 0.84967 0.88594 -0.03865046 8 0.81202 0.88637 -0.074349 0.997868 0.0383023 weaklyHypometh 1 1.00000 insignificant 0.99520 0.115288 insignificant 1 1 insignificant -0.060391 0.047357 weaklyHypometh 1 insignificant 0.83137 0.88584 -0.072553 8 0.79900 0.87374 -0.074738 0.97842 9.9515e-04 weaklyHypometh 1 8.2929e-02 weaklyHypometh 0.95735 3.3317e-02 weaklyHypometh 1 1.000000 insignificant -0.071089 0.02162622 weaklyHypometh 1.00000 insignificant chr8 126418377 126419377 89641 ENSG00000208579,ENSG00000222813 0.72988 69 6 0.54550 98 6 0.46490 43 4 0.79053 64 6 0.40000 21 2 0.61061 163 6 0.46111 40 6 0.65088 69 6 0.50152 47 5 0.60880 36 5 0.64011 179 6 0.50000 13 0 0.75244 54 6 0.68750 44 4 0.66061 46 4 0.65000 16 2 NA 0 0 0.60615 53 4 0.67438 77 4 0.66482 151 6 0.74405 22 2 0.75108 38 4 0.54051 65 6 0.63312 36 2 0.79167 18 0 0.66613 143 6 0.84630 37 4 0.44643 17 2 0.73803 67 4 0.66278 122 6 0.66977 102 6 0.59735 172 6 0.60480 80 6 0.62593 44 4 0.80120 68 4 0.833333 8 0 0.46263 45 6 0.64385 104 6 0.68072 74 6 0.74712 63 6 0.66059 77 6 0.71667 42 4 0.74561 46 2 0.72733 0.54101 0.46927 0.79785 0.50000 0.64133 0.51852 0.68011 0.50253 0.63966 0.66680 0.50000 0.73423 0.70833 0.66768 0.66667 NA 0.62136 0.73908 0.68131 0.75231 0.72799 0.62076 0.63384 0.73611 0.67136 0.84383 0.58745 0.75783 0.69011 0.68136 0.64096 0.54848 0.62099 0.75200 0.850926 0.51213 0.63261 0.67316 0.71603 0.70782 0.72778 0.74269 0 0.65627 0.66985 -0.0174478 6 0.61252 0.65033 -0.0378109 0.8244946 0.390366 insignificant 1 1 insignificant 0.981003 0.088654 insignificant 1 1 insignificant -0.0634222 0.129057 lowCoverage 1 lowCoverage 0.65652 0.62464 0.030206 6 0.63127 0.62798 0.0032908 3.7591e-02 0.49620 weaklyHypermeth 1.0000e+00 1 insignificant 3.7162e-01 0.49437 insignificant 1.0000e+00 1 insignificant -0.0514444 0.4258994 lowCoverage 1.00000 lowCoverage 0.65627 0.71854 -0.058268 6 0.61252 0.73173 -0.119219 0.957146 0.102879 insignificant 1 1.000 insignificant 0.94277 1.4731e-02 weaklyHypometh 1 1.000000 insignificant -0.099629 0.0034724 lowCoverage 1 lowCoverage 0.66986 0.62464 0.044438 6 0.64760 0.62798 0.0196258 3.8287e-03 0.54211 weaklyHypermeth 1.3674e-01 1 insignificant 9.7788e-02 0.61874 insignificant 1.00000000 1 insignificant 0.011978 0.8567542 lowCoverage 1.00000 lowCoverage 0.66985 0.71854 -0.03844929 6 0.65033 0.73173 -0.081408 0.823708 0.0014083 weaklyHypometh 1 0.70416 insignificant 0.84538 0.054171 insignificant 1 1 insignificant -0.036207 0.336430 lowCoverage 1 lowCoverage 0.62464 0.71761 -0.093906 6 0.62798 0.68702 -0.059046 0.76522 3.1162e-04 weaklyHypometh 1 5.1199e-02 weaklyHypometh 0.85953 2.8682e-02 weaklyHypometh 1 1.000000 insignificant -0.048185 0.44129910 lowCoverage 1.00000 lowCoverage chr8 127958146 127959146 89696 ENSG00000212451 0.64345 132 5 0.33887 113 6 0.33452 142 7 0.56895 144 5 0.50839 64 6 0.50344 287 7 0.59326 146 6 0.45326 136 7 0.36774 112 7 0.35522 87 6 0.47146 225 7 0.54125 91 6 0.26821 148 7 0.00000 18 1 0.47814 111 7 0.56919 90 7 0.41932 107 6 0.28925 148 6 0.46652 120 7 0.53137 187 6 0.29293 43 3 0.53824 132 5 0.51469 186 5 0.38159 125 7 0.43670 156 6 0.50729 192 7 0.41722 101 7 0.39784 58 3 0.39414 113 7 0.38944 236 7 0.59248 112 6 0.50420 205 6 0.36603 116 6 0.10891 99 7 0.32621 221 6 0.071429 70 6 0.21804 166 7 0.11907 152 6 0.48571 173 6 0.42769 153 6 0.44624 185 6 0.31646 136 7 0.34347 251 6 0.67073 0.40437 0.44107 0.68623 0.58831 0.70501 0.66903 0.55812 0.48072 0.46885 0.59656 0.60305 0.36214 NA 0.62064 0.72170 0.48395 0.36073 0.58205 0.63647 0.39162 0.55598 0.69465 0.56269 0.64017 0.64132 0.45948 0.37984 0.53015 0.54511 0.65663 0.55845 0.56682 0.15007 0.58597 0.085764 0.36770 0.11875 0.50679 0.49291 0.58214 0.38476 0.44549 5 0.50211 0.49397 -0.0040810 7 0.44147 0.43888 0.0025950 0.5986480 0.785817 insignificant 1 1 insignificant 0.606091 0.831581 insignificant 1 1 insignificant -0.0121386 0.768449 insignificant 1 insignificant 0.50211 0.34223 0.178264 7 0.44147 0.22577 0.2156984 8.0078e-14 0.99998 weaklyHypermeth 1.6016e-11 1 weaklyHypermeth 8.2079e-09 1.00000 weaklyHypermeth 2.0520e-06 1 weaklyHypermeth 0.2334757 0.0031061 weaklyHypermeth 0.63364 insignificant 0.50211 0.43318 0.065760 7 0.44147 0.38994 0.051535 0.063373 0.955979 insignificant 1 1.000 insignificant 0.11713 7.9383e-01 insignificant 1 1.000000 insignificant 0.031176 0.5068647 insignificant 1 insignificant 0.49397 0.34223 0.169991 7 0.43888 0.22577 0.2131034 8.7598e-12 1.00000 weaklyHypermeth 2.9199e-09 1 weaklyHypermeth 3.5473e-06 1.00000 weaklyHypermeth 0.00088684 1 weaklyHypermeth 0.245614 0.0026673 weaklyHypermeth 0.37355 insignificant 0.49397 0.43318 0.06763771 7 0.43888 0.38994 0.048940 0.024227 0.9498885 weaklyHypermeth 1 1.00000 insignificant 0.14827 0.923550 insignificant 1 1 insignificant 0.043314 0.308971 insignificant 1 insignificant 0.34223 0.43318 -0.083483 7 0.22577 0.38994 -0.164164 0.99927 4.6870e-09 weaklyHypometh 1 2.3435e-06 weaklyHypometh 1.00000 3.1300e-05 weaklyHypometh 1 0.010433 weaklyHypometh -0.202300 0.00892256 weaklyHypometh 0.99140 insignificant chr8 128604791 128605791 89746 POU5F1B ENSG00000212993 0.63133 156 5 0.69609 111 5 0.67186 112 5 0.69882 104 5 0.72490 60 5 0.72577 265 5 0.65023 90 5 0.47688 99 5 0.59089 112 5 0.69388 86 5 0.65768 153 5 0.74002 91 5 0.46022 123 5 0.63636 13 1 0.47896 87 5 0.40745 57 5 0.46543 76 5 0.45918 78 5 0.60605 164 5 0.68059 235 5 0.67679 38 5 0.60411 62 5 0.64239 78 5 0.91000 44 4 0.75000 29 5 0.68632 204 5 0.62314 71 4 0.66905 51 5 0.73743 117 5 0.59337 163 5 0.72303 193 5 0.65835 287 5 0.50622 112 5 0.49615 77 5 0.63681 126 5 0.762626 48 5 0.60511 51 5 0.68995 175 5 0.44676 150 5 0.66456 173 5 0.71997 116 5 0.63881 126 5 0.64189 134 5 0.67752 0.67139 0.69879 0.67671 0.72443 0.65133 0.65643 0.71862 0.67738 0.64319 0.75081 0.73834 0.69363 NA 0.72240 0.62602 0.53240 0.69559 0.64068 0.71921 0.76460 0.64122 0.68335 0.92103 0.74206 0.70455 0.63492 0.77609 0.62125 0.63921 0.64606 0.69473 0.56317 0.53469 0.60672 0.742330 0.66054 0.60543 0.67082 0.70923 0.70773 0.67200 0.68788 5 0.66593 0.66791 -0.0115659 5 0.60489 0.75025 -0.1453673 0.9699630 0.158262 insignificant 1 1 insignificant 0.979954 0.044638 weaklyHypometh 1 1 insignificant -0.0818689 0.025041 lowCoverage 1 lowCoverage 0.66637 0.59423 0.068751 5 0.63883 0.72844 -0.0896057 2.5054e-02 0.92566 weaklyHypermeth 7.6810e-01 1 insignificant 1.4264e-01 0.87545 insignificant 1.0000e+00 1 insignificant -0.0085153 0.8655579 lowCoverage 1.00000 lowCoverage 0.66637 0.66237 -0.008367 5 0.63883 0.59118 0.047646 0.744244 0.690393 insignificant 1 1.000 insignificant 0.83888 8.1009e-01 insignificant 1 1.000000 insignificant -0.014766 0.7861866 lowCoverage 1 lowCoverage 0.66742 0.59423 0.076857 5 0.71904 0.72844 -0.0094009 1.6352e-02 0.98160 weaklyHypermeth 4.6720e-01 1 insignificant 5.9625e-02 0.97626 insignificant 1.00000000 1 insignificant 0.073354 0.1709743 lowCoverage 1.00000 lowCoverage 0.66742 0.66237 -0.00049313 5 0.71904 0.59118 0.127851 0.259849 0.8322358 insignificant 1 1.00000 insignificant 0.21088 0.850223 insignificant 1 1 insignificant 0.067103 0.244955 lowCoverage 1 lowCoverage 0.59423 0.66237 -0.079744 5 0.72844 0.59118 0.137251 0.99956 3.6544e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.98375 3.0382e-01 insignificant 1 1.000000 insignificant -0.006251 0.92291685 insignificant 1.00000 insignificant chr8 139874447 139875447 90165 COL22A1 ENSG00000169436 0.90000 51 5 0.94444 41 5 0.78132 47 3 0.97033 46 3 0.90000 19 2 0.96269 141 5 0.86316 63 3 0.94225 75 5 0.88923 47 5 0.96000 24 4 0.96630 118 5 1.00000 8 0 0.96314 69 5 0.95556 29 3 1.00000 69 5 1.00000 6 0 NA 0 0 0.95966 66 5 0.78719 169 5 0.95795 86 5 0.94848 44 5 1.00000 35 5 0.93556 34 3 1.00000 24 2 1.00000 16 1 0.97687 169 5 0.94643 52 4 0.90000 51 3 0.97628 133 5 0.98503 124 5 0.96752 141 5 0.95392 122 5 0.79333 46 5 0.930000 58 5 NA 0 0 1.00000 4 0 0.74552 96 5 0.813669 201 5 0.95795 51 5 0.90649 46 5 0.97947 64 3 0.95778 36 3 0.97143 68 5 0.93411 0.95220 0.73026 0.96371 0.94186 0.97270 0.82987 0.95617 0.91306 0.94884 0.96416 0.97865 0.95559 0.94832 1.00000 0.97865 NA 0.95173 0.80862 0.96664 0.95560 1.00000 0.91990 1.00000 1.00000 0.97528 0.93439 0.93023 0.97548 0.98601 0.96573 0.95053 0.77636 0.93023 NA 0.83873 0.75376 0.77558 0.94931 0.91362 0.97491 0.94599 0.96346 0 0.91908 0.96825 -0.0482822 5 0.91387 0.96947 -0.055603 0.999880 0.0040341 weaklyHypometh 1 1 insignificant 0.98120 0.115323 insignificant 1 1 insignificant -0.03409240 0.056344 lowCoverage 1 lowCoverage 0.91908 0.80247 0.128932 5 0.91387 0.81865 0.095224 3.9265e-06 0.88664 weaklyHypermeth 1.2666e-04 1 weaklyHypermeth 1.5571e-03 0.99836 weaklyHypermeth 6.7699e-02 1 weaklyHypermeth 0.075243 1.8914e-01 lowCoverage 1.0000e+00 lowCoverage 0.91908 0.95094 -0.0314152 5 0.91387 0.95448 -0.0406064 8.8052e-01 0.085719 insignificant 1.0000e+00 1 insignificant 3.9781e-01 0.1272378 insignificant 1.0000000 1 insignificant -0.022876 0.2566991 lowCoverage 1.00000 lowCoverage 0.96825 0.80247 0.1658769 5 0.96947 0.81865 0.15082688 1.6293e-11 0.99999 weaklyHypermeth 2.0367e-09 1 weaklyHypermeth 1.4286e-04 0.99998 weaklyHypermeth 1.2624e-02 1 weaklyHypermeth 0.1093357 7.9685e-02 lowCoverage 1.0000e+00 lowCoverage 0.96825 0.95094 0.0160024 5 0.96947 0.95448 0.014997 6.7939e-02 0.35723 insignificant 1.0000e+00 1 insignificant 1.9675e-01 0.44937 insignificant 1.00000000 1 insignificant 0.0112160 0.4886457 lowCoverage 1.00000 lowCoverage 0.80247 0.95094 -0.1669595 5 0.81865 0.95448 -0.1358300 0.99761802 3.9041e-05 weaklyHypometh 1.00000 3.0031e-03 weaklyHypometh 0.9999473 2.3979e-03 weaklyHypometh 1 2.0284e-01 insignificant -0.09811970 1.0502e-01 lowCoverage 1.0000e+00 lowCoverage chr8 140763117 140764117 90173 COL22A1 ENSG00000169436 0.86517 177 6 0.84374 189 6 0.72394 198 6 0.91072 234 6 0.82188 79 6 0.88436 312 6 0.81836 109 6 0.82534 185 6 0.85220 148 6 0.79014 159 6 0.90300 183 6 0.77408 82 6 0.89367 217 6 0.94047 117 6 0.90383 263 6 0.72751 92 6 0.50000 10 0 0.92408 258 6 0.94878 148 6 0.86215 197 6 0.94048 66 5 0.84896 143 6 0.81069 156 6 0.69715 145 6 0.83565 65 5 0.89544 181 6 0.87910 115 6 0.89098 136 6 0.74953 165 6 0.89732 254 6 0.86710 165 6 0.88860 222 6 0.44657 145 6 0.519192 111 6 0.45000 126 3 0.55833 21 1 0.46195 251 6 0.700025 151 6 0.92845 255 6 0.93178 183 6 0.90939 224 6 0.86359 248 6 0.84352 224 6 0.86040 0.86617 0.76853 0.90928 0.83269 0.87643 0.84211 0.84956 0.86894 0.92685 0.91244 0.79528 0.91728 0.94237 0.90973 0.83022 0.67458 0.91044 0.92908 0.89570 0.95907 0.86683 0.83510 0.78439 0.88638 0.91524 0.88862 0.91790 0.91196 0.92139 0.88806 0.88692 0.46977 0.55670 0.58193 0.59670 0.61181 0.73695 0.93623 0.94341 0.89929 0.89616 0.87001 4 0.87638 0.88183 -0.0094872 6 0.78693 0.74527 0.041654 0.676712 0.4523910 insignificant 1 1 insignificant 0.96558 0.314200 insignificant 1 1 insignificant -0.01441157 0.636984 insignificant 1 insignificant 0.87638 0.58261 0.299171 6 0.78693 0.46823 0.318697 3.5358e-23 1.00000 hypermethylated 8.8394e-21 1 hypermethylated 9.3193e-09 1.00000 hypermethylated 3.1064e-06 1 hypermethylated 0.312992 9.6759e-05 lowCoverage 1.3823e-02 lowCoverage 0.87686 0.90035 -0.0238964 6 0.86252 0.89076 -0.0282319 7.3192e-01 0.198025 insignificant 1.0000e+00 1 insignificant 6.9546e-01 0.0855875 insignificant 1.0000000 1 insignificant -0.059674 0.0537865 insignificant 1.00000 insignificant 0.88183 0.58261 0.2962037 6 0.74527 0.46823 0.27704308 8.5474e-17 1.00000 hypermethylated 1.7095e-14 1 hypermethylated 1.0340e-07 1.00000 hypermethylated 2.4007e-05 1 hypermethylated 0.3274038 1.0351e-04 lowCoverage 2.5878e-02 lowCoverage 0.88232 0.90035 -0.0178824 6 0.86948 0.89076 -0.021272 8.8681e-01 0.17360 insignificant 1.0000e+00 1 insignificant 7.5937e-01 0.12835 insignificant 1.00000000 1 insignificant -0.0452628 0.1132857 insignificant 1.00000 insignificant 0.58333 0.90035 -0.3260337 6 0.54627 0.89076 -0.3444893 1.00000000 5.6860e-11 hypomethylated 1.00000 1.4215e-08 hypomethylated 1.0000000 3.0101e-07 hypomethylated 1 1.0034e-04 hypomethylated -0.37266661 6.7109e-05 lowCoverage 1.6777e-02 lowCoverage chr8 142422882 142423882 90190 SLC45A4 ENSG00000022567 0.82428 151 5 0.65532 166 6 0.68711 111 6 0.81746 110 3 0.70931 89 6 0.81129 228 7 0.85000 92 6 0.91612 164 7 0.78648 113 6 0.84097 92 6 0.86118 243 7 0.68788 67 4 0.71284 220 7 0.79048 38 1 0.96181 92 4 0.76694 41 3 0.45918 38 3 0.91231 132 4 0.88415 244 6 0.75645 194 7 0.75528 89 6 0.82040 71 5 0.70719 116 6 0.80148 79 4 0.88763 53 3 0.89548 264 7 0.81655 168 6 0.55247 52 4 0.90643 235 6 0.90280 278 7 0.84494 272 7 0.83254 275 7 0.57405 209 6 0.838227 136 4 0.78143 157 5 0.86126 47 4 0.91451 91 6 0.901063 258 7 0.91712 132 4 0.89168 198 6 0.85545 111 4 0.80140 212 4 0.91301 111 6 0.84600 0.78599 0.86019 0.83407 0.86170 0.89503 0.89469 0.95092 0.89286 0.87614 0.91874 0.87110 0.87373 NA 0.94772 0.72134 0.75000 0.89908 0.87787 0.82549 0.92685 0.95859 0.88279 0.89866 0.93064 0.89068 0.89093 0.81871 0.90644 0.91419 0.87102 0.90058 0.83625 0.92987 0.93524 0.88341 0.97616 0.92573 0.93656 0.92616 0.89877 0.89187 0.91999 3 0.85600 0.88353 -0.0234000 6 0.71344 0.82119 -0.107750 0.992650 0.0668322 insignificant 1 1 insignificant 0.98342 0.078421 insignificant 1 1 insignificant -0.02568844 0.513332 insignificant 1 insignificant 0.85600 0.88170 -0.019011 6 0.71344 0.69344 0.019994 2.5662e-01 0.11344 insignificant 1.0000e+00 1 insignificant 9.7483e-01 0.12347 insignificant 1.0000e+00 1 insignificant -0.027180 6.4846e-01 insignificant 1.0000e+00 insignificant 0.85633 0.89777 -0.0365387 4 0.81535 0.88882 -0.0734614 9.8495e-01 0.014048 lowCoverage 1.0000e+00 1 lowCoverage 9.9294e-01 0.0022648 lowCoverage 1.0000000 1 lowCoverage -0.091153 0.0144965 lowCoverage 1.00000 lowCoverage 0.88320 0.88196 -0.0044063 7 0.75695 0.75475 0.00219509 2.5747e-01 0.72427 insignificant 1.0000e+00 1 insignificant 8.9023e-01 0.58970 insignificant 1.0000e+00 1 insignificant -0.0014918 9.8046e-01 insignificant 1.0000e+00 insignificant 0.88398 0.89791 -0.0119575 4 0.86285 0.90271 -0.039862 9.6501e-01 0.26781 lowCoverage 1.0000e+00 1 lowCoverage 9.5573e-01 0.18205 lowCoverage 1.00000000 1 lowCoverage -0.0654648 0.0925943 lowCoverage 1.00000 lowCoverage 0.88281 0.89791 -0.0168404 4 0.81844 0.90271 -0.0842730 0.94332925 2.0173e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.9506398 3.3366e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.06397302 2.9027e-01 lowCoverage 1.0000e+00 lowCoverage chr8 142758907 142759907 90196 ENSG00000214761 0.83275 210 10 0.78279 219 9 0.76069 255 9 0.93325 171 6 0.80333 87 7 0.84507 263 10 0.79809 202 9 0.92090 178 8 0.77228 252 8 0.80592 264 10 0.78699 308 10 0.83870 218 9 0.80341 291 10 0.63672 75 3 0.82464 262 10 0.86997 110 9 0.72178 68 7 0.86673 183 7 0.89010 278 10 0.78069 208 9 0.65202 156 10 0.68490 101 5 0.77250 218 10 0.65101 151 9 0.95833 61 4 0.85265 279 9 0.81976 149 8 0.61573 171 10 0.87461 242 9 0.86922 289 10 0.78529 263 9 0.82554 219 9 0.21181 332 9 0.149870 245 9 0.17216 239 9 0.25377 54 6 0.10424 172 8 0.190335 356 10 0.72544 225 8 0.71051 272 9 0.80211 154 7 0.66107 254 7 0.73768 146 5 0.91761 0.79395 0.76888 0.87706 0.90911 0.91995 0.90090 0.89935 0.85059 0.93978 0.85270 0.86178 0.82120 0.83900 0.87442 0.94002 0.82629 0.83181 0.89227 0.86691 0.88151 0.85382 0.88596 0.93193 0.94095 0.92018 0.86184 0.83463 0.91286 0.90174 0.91468 0.88905 0.25683 0.30250 0.25249 0.27370 0.21995 0.15945 0.82661 0.83886 0.85193 0.70838 0.81617 4 0.86446 0.87038 -0.0224965 9 0.78027 0.70751 0.072764 0.437256 0.1042413 insignificant 1 1 insignificant 0.55459 0.128326 insignificant 1 1 insignificant 0.03361075 0.344106 insignificant 1 insignificant 0.86446 0.18169 0.674526 9 0.78027 0.12368 0.656589 1.9287e-95 1.00000 hypermethylated 1.9287e-92 1 hypermethylated 2.9438e-22 1.00000 hypermethylated 2.9438e-19 1 hypermethylated 0.633374 8.7679e-11 hypermethylated 8.7679e-08 hypermethylated 0.86528 0.79163 0.0747980 7 0.82935 0.71441 0.1149477 2.6598e-12 0.994490 weaklyHypermeth 1.3299e-09 1 weaklyHypermeth 4.9068e-05 0.9723590 weaklyHypermeth 0.0163562 1 weaklyHypermeth 0.086378 0.0134576 weaklyHypermeth 1.00000 insignificant 0.87038 0.18169 0.6853040 10 0.70751 0.12368 0.58382518 8.9892e-66 1.00000 hypermethylated 8.9892e-63 1 hypermethylated 2.1570e-17 1.00000 hypermethylated 2.1570e-14 1 hypermethylated 0.5997634 2.8558e-11 hypermethylated 2.8558e-08 hypermethylated 0.87753 0.79163 0.1002631 7 0.83702 0.71441 0.122616 1.6444e-10 0.99884 weaklyHypermeth 5.4815e-08 1 weaklyHypermeth 1.3343e-05 0.98368 weaklyHypermeth 0.00444781 1 weaklyHypermeth 0.0527677 0.1909517 insignificant 1.00000 insignificant 0.18260 0.79163 -0.5954732 7 0.16079 0.71441 -0.5536183 1.00000000 2.6247e-33 hypomethylated 1.00000 2.6247e-30 hypomethylated 1.0000000 1.0868e-11 hypomethylated 1 1.0868e-08 hypomethylated -0.54699573 4.2231e-08 hypomethylated 4.2231e-05 hypomethylated chr8 143535926 143536926 90209 TSNARE1 ENSG00000171045 0.74012 105 5 0.93333 42 3 0.54286 41 3 0.64379 58 3 0.72222 41 4 0.87328 187 5 0.50000 26 2 0.93394 73 5 0.90278 19 0 0.77976 65 5 0.89618 97 5 0.72222 11 0 0.48188 87 6 0.83503 68 6 0.59276 66 5 0.50000 19 1 NA 0 0 0.66747 100 5 0.78662 130 5 0.95143 194 5 0.81818 50 5 0.90000 8 0 0.54379 51 5 1.00000 35 3 0.25000 5 0 0.74286 46 5 0.50415 71 5 0.82500 19 2 0.88720 91 5 0.72517 54 3 0.70455 57 5 0.93777 163 5 0.47110 80 5 0.341646 155 5 0.66667 91 5 NA 0 0 0.32432 63 5 0.639610 108 5 0.63094 83 5 0.69729 92 5 0.68056 28 3 0.62143 47 5 0.48498 52 5 0.91916 0.90000 0.74000 0.89510 0.80000 0.91649 0.40000 0.94502 0.90833 0.92143 0.87666 0.96667 0.89482 0.92907 0.90390 0.68685 NA 0.75826 0.82147 0.93043 0.98636 0.85000 0.75055 0.97847 NA 0.98500 0.82468 0.95625 0.92866 0.84786 0.84545 0.88980 0.48409 0.23352 0.95000 NA 0.45067 0.67403 0.79502 0.84614 0.90000 0.88000 0.67297 0 0.84325 0.83538 0.0160432 5 0.59296 0.51278 0.080177 0.671804 0.7421230 insignificant 1 1 insignificant 0.74180 0.558515 insignificant 1 1 insignificant 0.00058531 0.993579 lowCoverage 1 lowCoverage 0.84480 0.52918 0.324563 5 0.58584 0.33232 0.253515 4.2194e-10 0.99999 hypermethylated 2.6371e-08 1 hypermethylated 2.1201e-03 1.00000 weaklyHypermeth 8.4805e-02 1 weaklyHypermeth 0.248471 2.0575e-02 lowCoverage 8.2300e-01 lowCoverage 0.84373 0.71192 0.1401845 5 0.61361 0.51686 0.0967581 3.7555e-05 0.978268 weaklyHypermeth 4.1728e-03 1 weaklyHypermeth 8.1854e-03 0.9886097 weaklyHypermeth 0.6218345 1 insignificant 0.114101 0.0485730 lowCoverage 1.00000 lowCoverage 0.83721 0.52918 0.2968899 5 0.54340 0.33232 0.21107584 6.1995e-06 0.99998 hypermethylated 2.1377e-04 1 hypermethylated 6.3288e-03 1.00000 weaklyHypermeth 2.1358e-01 1 insignificant 0.2478858 2.5628e-02 lowCoverage 1.0000e+00 lowCoverage 0.83796 0.71192 0.1302197 5 0.62673 0.51686 0.109875 2.1615e-03 0.99998 weaklyHypermeth 1.9650e-01 1 insignificant 2.1806e-02 0.99999 weaklyHypermeth 1.00000000 1 insignificant 0.1135155 0.1365461 lowCoverage 1.00000 lowCoverage 0.53024 0.71380 -0.1770544 5 0.37386 0.50646 -0.1326011 0.97745640 5.7065e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9478390 1.4749e-01 insignificant 1 1.0000e+00 insignificant -0.13437024 1.4825e-01 lowCoverage 1.0000e+00 lowCoverage chr8 143550200 143551200 90210 BAI1 ENSG00000181790 0.18801 301 10 0.18743 403 11 0.21324 414 12 0.18798 396 9 0.26610 231 10 0.35228 462 11 0.22127 332 10 0.25500 338 9 0.23872 306 9 0.19897 308 8 0.29432 397 10 0.28794 149 8 0.24912 218 8 0.31040 121 5 0.27213 279 8 0.31606 86 9 0.22110 104 4 0.29882 385 8 0.28278 392 9 0.17743 437 9 0.23037 204 9 0.20794 191 8 0.16367 339 10 0.22727 210 8 0.24699 266 10 0.15896 591 11 0.19027 241 9 0.23327 137 9 0.24660 422 9 0.18345 536 11 0.18553 552 12 0.31869 398 10 0.15185 388 12 0.082199 353 9 0.19403 524 12 0.21875 77 6 0.20310 230 10 0.071948 515 12 0.20684 409 9 0.29022 352 10 0.27912 197 8 0.21721 328 8 0.20474 325 10 0.30080 0.27972 0.32126 0.27251 0.34417 0.35900 0.30883 0.32812 0.30529 0.28689 0.29838 0.36521 0.29654 0.30267 0.33544 0.37305 0.36926 0.33362 0.28549 0.28524 0.29503 0.26911 0.28512 0.30117 0.34599 0.29771 0.25985 0.30157 0.35031 0.29942 0.29957 0.34483 0.21095 0.10940 0.28175 0.29385 0.21006 0.09872 0.30085 0.38116 0.33539 0.33001 0.34714 8 0.34841 0.33480 0.0033516 9 0.35592 0.21527 0.140648 0.987905 0.3605218 insignificant 1 1 insignificant 0.80201 0.895694 insignificant 1 1 insignificant 0.03487088 0.052107 insignificant 1 insignificant 0.34803 0.18456 0.156114 9 0.24172 0.10620 0.135514 7.8181e-07 0.39222 weaklyHypermeth 2.7922e-05 1 weaklyHypermeth 1.9013e-02 0.81466 weaklyHypermeth 5.0034e-01 1 insignificant 0.097309 1.0703e-02 weaklyHypermeth 4.6969e-01 insignificant 0.34826 0.31491 -0.0391610 8 0.31314 0.19463 0.1185170 9.3818e-01 0.267722 insignificant 1.0000e+00 1 insignificant 9.5960e-01 0.5349877 insignificant 1.0000000 1 insignificant 0.011329 0.6181462 insignificant 1.00000 insignificant 0.33505 0.18495 0.1501603 11 0.22731 0.16579 0.06152296 4.7827e-05 0.96823 weaklyHypermeth 1.4493e-03 1 weaklyHypermeth 2.2704e-02 0.98058 weaklyHypermeth 5.2920e-01 1 insignificant 0.0624382 6.4672e-02 insignificant 1.0000e+00 insignificant 0.33513 0.31471 -0.0391794 8 0.24398 0.18165 0.062326 6.5460e-01 0.19286 insignificant 1.0000e+00 1 insignificant 8.2916e-01 0.35020 insignificant 1.00000000 1 insignificant -0.0235415 0.3277635 insignificant 1.00000 insignificant 0.18504 0.31491 -0.1859271 8 0.17763 0.19463 -0.0169972 0.62150622 3.2671e-02 weaklyHypometh 1.00000 8.8299e-01 insignificant 0.9298449 1.4772e-01 insignificant 1 1.0000e+00 insignificant -0.08597976 2.5407e-02 weaklyHypometh 1.0000e+00 insignificant chr8 143589521 143590521 90213 BAI1 ENSG00000181790 0.23529 351 26 0.28591 516 23 0.32716 907 27 0.27635 334 14 0.33121 641 23 0.36201 475 29 0.28111 851 25 0.25440 568 24 0.30083 838 29 0.30358 837 29 0.31999 775 29 0.32294 933 20 0.33461 916 29 0.47212 329 16 0.33486 803 25 0.24549 936 17 0.20998 686 21 0.34531 475 19 0.30859 697 25 0.33699 318 24 0.33334 239 17 0.35864 333 17 0.32888 427 21 0.31516 244 15 0.33056 526 16 0.29101 822 28 0.30428 394 21 0.23347 359 21 0.26080 574 29 0.28814 761 29 0.25863 786 26 0.38169 473 23 0.20213 584 27 0.182061 670 23 0.34520 685 17 0.32630 290 15 0.18658 471 27 0.362610 623 26 0.33860 311 22 0.35477 395 25 0.36336 231 16 0.29275 362 21 0.31979 385 27 0.56948 0.53950 0.61931 0.59160 0.60596 0.62380 0.58652 0.59584 0.55651 0.58958 0.57742 0.62165 0.60415 0.61682 0.62014 0.59545 0.49347 0.55459 0.59790 0.57912 0.60882 0.59318 0.62650 0.61410 0.61627 0.57789 0.57628 0.53425 0.57999 0.61393 0.55669 0.65996 0.49522 0.47963 0.50523 0.59188 0.47247 0.57053 0.61049 0.61814 0.60334 0.59852 0.61211 5 0.29107 0.38060 -0.0018465 27 0.35058 0.27391 0.076672 0.089465 0.8411657 insignificant 1 1 insignificant 0.19217 0.912773 insignificant 1 1 insignificant 0.00238664 0.893168 insignificant 1 insignificant 0.29109 0.30795 0.055492 27 0.35934 0.27813 0.081210 2.5578e-14 0.65608 weaklyHypermeth 2.8420e-12 1 weaklyHypermeth 3.9026e-05 0.92529 weaklyHypermeth 3.0020e-03 1 weaklyHypermeth 0.041958 2.9920e-01 insignificant 1.0000e+00 insignificant 0.29027 0.51069 -0.0036685 25 0.30668 0.33325 -0.0265749 2.8587e-01 0.049465 weaklyHypometh 1.0000e+00 1 insignificant 7.3182e-01 0.1406986 insignificant 1.0000000 1 insignificant -0.024416 0.1926176 insignificant 1.00000 insignificant 0.38088 0.30795 0.0545553 27 0.27718 0.27813 -0.00095025 4.7651e-08 0.80314 weaklyHypermeth 3.4036e-06 1 weaklyHypermeth 6.6215e-03 0.97779 weaklyHypermeth 2.1360e-01 1 insignificant 0.0395709 3.2547e-01 insignificant 1.0000e+00 insignificant 0.38136 0.51069 0.0027324 25 0.29317 0.33325 -0.040086 8.3695e-01 0.13656 insignificant 1.0000e+00 1 insignificant 9.9762e-01 0.43833 insignificant 1.00000000 1 insignificant -0.0268031 0.1587534 insignificant 1.00000 insignificant 0.30806 0.51069 -0.0611274 25 0.25001 0.33325 -0.0832436 0.99390473 2.9366e-06 weaklyHypometh 1.00000 3.2628e-04 weaklyHypometh 0.9999277 9.5121e-03 weaklyHypometh 1 4.5296e-01 insignificant -0.06637401 1.2243e-01 insignificant 1.0000e+00 insignificant chr8 144149903 144150903 90218 CYP11B2 ENSG00000179142 0.74248 92 5 0.67066 58 5 0.56453 51 5 0.81190 83 5 0.78095 41 5 0.82438 172 5 0.80444 37 5 0.73333 95 5 0.83674 67 5 0.78462 65 5 0.80509 141 5 0.83333 24 2 0.78201 63 5 0.70000 23 2 0.92000 37 2 0.77000 22 2 1.00000 5 0 0.73632 101 5 0.81102 89 4 0.81475 128 5 0.60794 27 4 0.83095 35 5 0.78237 71 5 0.80844 61 5 0.78368 68 5 0.85914 89 5 0.60667 40 2 0.67063 34 5 0.80031 57 2 0.71667 59 5 0.70611 83 5 0.78056 171 5 0.67650 54 5 0.658214 61 5 0.65705 92 5 0.89143 21 3 0.70482 50 5 0.654332 85 5 0.73973 89 5 0.78715 114 5 0.80548 77 5 0.73736 63 5 0.77642 110 5 0.76504 0.67725 0.56630 0.82054 0.78638 0.79468 0.82451 0.74517 0.86134 0.80805 0.82290 0.84579 0.76306 0.73053 0.90654 0.78318 0.86258 0.74611 0.77864 0.82548 0.76279 0.83155 0.79351 0.78984 0.79488 0.83417 0.62804 0.62061 0.78908 0.72222 0.70471 0.75089 0.69074 0.67123 0.67493 0.91348 0.71727 0.80088 0.74448 0.79932 0.81156 0.74556 0.74367 1 0.78049 0.75975 0.0242297 5 0.80908 0.75853 0.050551 0.119620 0.9636262 insignificant 1 1 insignificant 0.11992 0.965686 insignificant 1 1 insignificant 0.04020555 0.211384 lowCoverage 1 lowCoverage 0.78049 0.70799 0.062699 5 0.80908 0.59160 0.217480 2.7709e-02 0.99808 weaklyHypermeth 5.2281e-01 1 insignificant 4.7091e-02 0.99528 weaklyHypermeth 9.6245e-01 1 insignificant 0.079271 9.9786e-02 lowCoverage 1.0000e+00 lowCoverage 0.78049 0.76380 0.0157894 5 0.80908 0.80067 0.0084181 5.1177e-01 0.832448 insignificant 1.0000e+00 1 insignificant 4.3672e-01 0.7304642 insignificant 1.0000000 1 insignificant 0.017098 0.4833735 lowCoverage 1.00000 lowCoverage 0.75975 0.70799 0.0406132 5 0.75853 0.59160 0.16692809 6.7148e-02 0.97224 insignificant 1.0000e+00 1 insignificant 2.1226e-01 0.98373 insignificant 1.0000e+00 1 insignificant 0.0390656 4.0516e-01 lowCoverage 1.0000e+00 lowCoverage 0.75975 0.76380 -0.0090913 5 0.75853 0.80067 -0.042133 8.3134e-01 0.49954 insignificant 1.0000e+00 1 insignificant 8.7700e-01 0.64695 insignificant 1.00000000 1 insignificant -0.0231077 0.4166614 lowCoverage 1.00000 lowCoverage 0.70799 0.76380 -0.0540767 5 0.59160 0.80067 -0.2090614 0.99175909 4.6598e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9976504 7.2615e-02 insignificant 1 1.0000e+00 insignificant -0.06217327 1.6925e-01 lowCoverage 1.0000e+00 lowCoverage chr8 144150375 144151375 90219 CYP11B2 ENSG00000179142 0.74248 92 5 0.67066 58 5 0.56453 51 5 0.81190 83 5 0.78095 41 5 0.82438 172 5 0.80444 37 5 0.73333 95 5 0.83674 67 5 0.78462 65 5 0.80509 141 5 0.83333 24 2 0.78201 63 5 0.70000 23 2 0.92000 37 2 0.77000 22 2 1.00000 5 0 0.73632 101 5 0.81102 89 4 0.81475 128 5 0.60794 27 4 0.83095 35 5 0.78237 71 5 0.80844 61 5 0.78368 68 5 0.85914 89 5 0.60667 40 2 0.67063 34 5 0.80031 57 2 0.71667 59 5 0.70611 83 5 0.78056 171 5 0.67650 54 5 0.658214 61 5 0.65705 92 5 0.89143 21 3 0.70482 50 5 0.654332 85 5 0.73973 89 5 0.78715 114 5 0.80548 77 5 0.73736 63 5 0.77642 110 5 0.76504 0.67725 0.56630 0.82054 0.78638 0.79468 0.82451 0.74517 0.86134 0.80805 0.82290 0.84579 0.76306 0.73053 0.90654 0.78318 0.86258 0.74611 0.77864 0.82548 0.76279 0.83155 0.79351 0.78984 0.79488 0.83417 0.62804 0.62061 0.78908 0.72222 0.70471 0.75089 0.69074 0.67123 0.67493 0.91348 0.71727 0.80088 0.74448 0.79932 0.81156 0.74556 0.74367 1 0.78049 0.75975 0.0242297 5 0.80908 0.75853 0.050551 0.119620 0.9636262 insignificant 1 1 insignificant 0.11992 0.965686 insignificant 1 1 insignificant 0.04020555 0.211384 lowCoverage 1 lowCoverage 0.78049 0.70799 0.062699 5 0.80908 0.59160 0.217480 2.7709e-02 0.99808 weaklyHypermeth 5.2281e-01 1 insignificant 4.7091e-02 0.99528 weaklyHypermeth 9.6245e-01 1 insignificant 0.079271 9.9786e-02 lowCoverage 1.0000e+00 lowCoverage 0.78049 0.76380 0.0157894 5 0.80908 0.80067 0.0084181 5.1177e-01 0.832448 insignificant 1.0000e+00 1 insignificant 4.3672e-01 0.7304642 insignificant 1.0000000 1 insignificant 0.017098 0.4833735 lowCoverage 1.00000 lowCoverage 0.75975 0.70799 0.0406132 5 0.75853 0.59160 0.16692809 6.7148e-02 0.97224 insignificant 1.0000e+00 1 insignificant 2.1226e-01 0.98373 insignificant 1.0000e+00 1 insignificant 0.0390656 4.0516e-01 lowCoverage 1.0000e+00 lowCoverage 0.75975 0.76380 -0.0090913 5 0.75853 0.80067 -0.042133 8.3134e-01 0.49954 insignificant 1.0000e+00 1 insignificant 8.7700e-01 0.64695 insignificant 1.00000000 1 insignificant -0.0231077 0.4166614 lowCoverage 1.00000 lowCoverage 0.70799 0.76380 -0.0540767 5 0.59160 0.80067 -0.2090614 0.99175909 4.6598e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9976504 7.2615e-02 insignificant 1 1.0000e+00 insignificant -0.06217327 1.6925e-01 lowCoverage 1.0000e+00 lowCoverage chr8 144891438 144892438 90222 FAM83H ENSG00000180921 0.86820 622 20 0.67953 500 18 0.85919 621 20 0.93555 643 20 0.89472 316 18 0.92162 1056 20 0.84492 459 16 0.91524 541 20 0.90666 495 20 0.90689 486 20 0.92574 672 20 0.91355 285 12 0.91966 667 20 0.90762 307 15 0.88710 510 20 0.81508 182 12 0.88418 97 8 0.80440 663 20 0.93191 712 20 0.92049 769 20 0.93105 296 20 0.84149 272 14 0.85525 499 20 0.83315 276 18 0.94998 216 14 0.91050 660 20 0.85219 353 20 0.87591 326 20 0.92760 639 20 0.90202 738 20 0.86000 619 20 0.88867 904 20 0.65454 627 20 0.598178 533 19 0.78228 326 10 0.73242 161 12 0.63195 458 18 0.699177 781 20 0.84829 628 20 0.87255 721 20 0.87213 440 20 0.88441 729 20 0.90731 593 20 0.91434 0.75823 0.89491 0.92400 0.90850 0.92993 0.89010 0.91609 0.90847 0.92395 0.93683 0.89075 0.92070 0.90017 0.91623 0.86081 0.85185 0.88638 0.92989 0.92223 0.91496 0.81734 0.89878 0.87118 0.94793 0.90599 0.83528 0.90913 0.92378 0.93339 0.90053 0.92868 0.63539 0.62829 0.78470 0.71305 0.72090 0.71117 0.90435 0.92137 0.91829 0.88205 0.91161 10 0.90814 0.90716 -0.0018538 20 0.82712 0.87569 -0.048578 0.418351 0.3298014 insignificant 1 1 insignificant 0.58177 0.313467 insignificant 1 1 insignificant -0.00353627 0.841377 insignificant 1 insignificant 0.90830 0.65118 0.249482 20 0.88208 0.66391 0.218166 7.1902e-52 0.99951 hypermethylated 3.5951e-49 1 hypermethylated 1.4870e-12 0.99319 hypermethylated 7.4349e-10 1 hypermethylated 0.199023 2.5908e-04 weaklyHypermeth 2.5908e-02 weaklyHypermeth 0.90822 0.89839 0.0090259 20 0.84198 0.86585 -0.0238627 1.5826e-01 0.094810 insignificant 1.0000e+00 1 insignificant 2.5565e-01 0.0804069 insignificant 1.0000000 1 insignificant 0.005175 0.7582922 insignificant 1.00000 insignificant 0.90730 0.65130 0.2468189 20 0.88520 0.67919 0.20600550 4.4157e-34 0.99999 hypermethylated 2.2079e-31 1 hypermethylated 8.2005e-10 0.99999 hypermethylated 4.1002e-07 1 hypermethylated 0.2025589 3.2621e-04 hypermethylated 4.3196e-02 hypermethylated 0.90716 0.89810 0.0034659 20 0.87569 0.82820 0.047492 3.5006e-01 0.49122 insignificant 1.0000e+00 1 insignificant 2.4131e-01 0.43619 insignificant 1.00000000 1 insignificant 0.0087113 0.5633351 insignificant 1.00000 insignificant 0.65118 0.89836 -0.2508846 20 0.66391 0.85946 -0.1955459 0.99998485 1.6130e-18 hypomethylated 1.00000 8.0651e-16 hypomethylated 0.9999991 2.1213e-07 hypomethylated 1 1.0034e-04 hypomethylated -0.19384765 5.2713e-04 weaklyHypometh 6.7319e-02 weaklyHypometh chr8 145190261 145191261 90224 OPLAH ENSG00000178814 0.86989 441 13 0.77675 321 13 0.79755 233 13 0.78134 381 13 0.75804 123 7 0.86607 408 12 0.88264 178 7 0.93347 302 13 0.95262 197 8 0.89835 192 13 0.87398 419 13 0.88241 63 5 0.89330 295 13 0.90643 123 11 0.89912 189 13 0.87273 54 5 0.97476 59 3 0.68567 872 13 0.89851 613 15 0.86502 340 13 0.93594 121 7 0.69641 262 12 0.93286 221 8 0.84451 163 11 0.86799 261 12 0.90577 374 15 0.86386 237 12 0.53885 130 5 0.88589 484 13 0.92598 421 13 0.92345 522 13 0.88703 442 13 0.62094 434 13 0.609971 732 13 0.67555 332 10 0.71344 151 9 0.79076 147 7 0.734275 777 13 0.72248 483 13 0.77505 489 13 0.74265 391 13 0.66019 758 13 0.78781 369 15 0.89789 0.75563 0.84072 0.86531 0.85191 0.85237 0.87017 0.91811 0.92748 0.89816 0.88912 0.88995 0.87944 0.88887 0.88828 0.89106 0.93224 0.80968 0.93576 0.88388 0.95680 0.75577 0.90859 0.84713 0.90924 0.90938 0.87979 0.81555 0.86105 0.93128 0.93262 0.87958 0.64621 0.48671 0.71166 0.72468 0.76843 0.65911 0.78587 0.82970 0.81833 0.73252 0.80602 5 0.87137 0.88672 -0.0200026 13 0.86638 0.88727 -0.020890 0.930371 0.0079683 weaklyHypometh 1 1 insignificant 0.90464 0.228110 insignificant 1 1 insignificant 0.01271965 0.738358 insignificant 1 insignificant 0.87137 0.62519 0.223726 13 0.86638 0.68011 0.186278 1.6994e-19 0.99429 hypermethylated 2.4277e-17 1 hypermethylated 8.5871e-06 0.99964 hypermethylated 1.0734e-03 1 hypermethylated 0.172609 6.0881e-04 weaklyHypermeth 5.0734e-02 weaklyHypermeth 0.87137 0.76145 0.1006163 13 0.86638 0.76277 0.1036087 2.0082e-09 0.798651 weaklyHypermeth 6.6939e-07 1 weaklyHypermeth 4.8975e-06 0.9628976 weaklyHypermeth 0.0024488 1 weaklyHypermeth 0.125797 0.0015878 weaklyHypermeth 0.51347 insignificant 0.88672 0.62519 0.2715369 13 0.88727 0.68011 0.20716816 2.2145e-14 0.98850 hypermethylated 3.1636e-12 1 hypermethylated 1.3540e-05 0.99713 hypermethylated 1.8985e-03 1 hypermethylated 0.1598892 2.4597e-03 weaklyHypermeth 1.3755e-01 insignificant 0.88672 0.76145 0.1774775 13 0.88727 0.76277 0.124499 8.4495e-12 0.99515 weaklyHypermeth 4.2248e-09 1 weaklyHypermeth 2.9128e-04 0.99976 weaklyHypermeth 0.07282078 1 weaklyHypermeth 0.1130770 0.0142492 weaklyHypermeth 1.00000 insignificant 0.62519 0.76145 -0.0779812 13 0.68011 0.76277 -0.0826691 0.23602470 1.0958e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3859667 4.0659e-01 insignificant 1 1.0000e+00 insignificant -0.04681228 2.2847e-01 insignificant 1.0000e+00 insignificant chr8 145463918 145464918 90231 SCXA ENSG00000188686 0.62190 116 6 0.82613 96 8 0.75093 90 5 0.74548 137 5 0.59186 94 5 0.74682 215 7 0.80424 44 5 0.87847 140 6 0.90440 79 6 0.98342 111 6 0.93983 232 9 0.66905 28 4 0.80987 157 6 0.93277 96 6 0.93930 96 6 0.74848 40 4 0.66667 5 0 0.76488 200 6 0.95006 187 7 0.88470 101 6 0.82449 120 6 0.87285 80 6 0.78247 63 5 0.66612 109 6 0.85892 68 6 0.87246 125 12 0.64860 129 6 0.56314 49 4 0.92545 111 6 0.94313 122 8 0.88798 120 7 0.86011 213 6 0.71138 131 5 0.747094 147 11 0.93750 50 3 0.59091 20 1 0.80634 93 7 0.780632 119 6 0.81852 46 5 0.66660 119 6 0.89786 77 6 0.63095 33 2 0.67647 140 7 0.94931 0.78121 0.83347 0.92980 0.95091 0.91369 0.78366 0.81402 0.80946 0.95962 0.96807 0.78226 0.85087 0.94281 0.91709 0.78077 0.73089 0.76865 0.91056 0.92665 0.84080 0.77637 0.92507 0.87141 0.76059 0.90248 0.85659 0.84769 0.97097 0.89715 0.91704 0.89362 0.74258 0.78210 0.83936 0.80645 0.86881 0.74957 0.95161 0.86004 0.86249 0.73589 0.88248 2 0.87362 0.87471 0.0018324 6 0.77379 0.83156 -0.057772 0.881157 0.3631467 insignificant 1 1 insignificant 0.87457 0.484000 insignificant 1 1 insignificant -0.00084713 0.984588 insignificant 1 insignificant 0.87362 0.79391 0.088708 6 0.77379 0.73366 0.040123 4.8931e-04 0.78065 weaklyHypermeth 1.2877e-02 1 weaklyHypermeth 3.4106e-01 0.74398 insignificant 1.0000e+00 1 insignificant 0.045652 4.1640e-01 insignificant 1.0000e+00 insignificant 0.87568 0.84672 0.0218714 6 0.80026 0.54533 0.2549259 1.3513e-03 0.994608 weaklyHypermeth 9.6520e-02 1 weaklyHypermeth 2.0624e-01 0.9494233 insignificant 1.0000000 1 insignificant 0.069882 0.2676369 insignificant 1.00000 insignificant 0.87471 0.79391 0.0842777 6 0.83156 0.73366 0.09789456 5.4816e-03 0.93309 weaklyHypermeth 1.2432e-01 1 insignificant 1.6778e-01 0.83786 insignificant 1.0000e+00 1 insignificant 0.0464991 4.4096e-01 insignificant 1.0000e+00 insignificant 0.87884 0.84672 0.0273313 6 0.85676 0.54533 0.311429 1.4689e-02 0.99243 weaklyHypermeth 1.0000e+00 1 insignificant 7.0415e-02 0.98501 insignificant 1.00000000 1 insignificant 0.0707293 0.2859366 insignificant 1.00000 insignificant 0.79317 0.84578 -0.0390371 6 0.74718 0.56107 0.1861066 0.54338779 4.1126e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4659000 9.3108e-01 insignificant 1 1.0000e+00 insignificant 0.02423019 7.3469e-01 insignificant 1.0000e+00 insignificant chr9 4017147 4018147 90540 GLIS3 ENSG00000107249 0.95339 406 6 0.89349 239 6 0.91481 38 6 0.93951 361 6 1.00000 43 6 0.94987 386 6 0.95477 85 6 0.96296 83 6 1.00000 20 2 1.00000 20 2 0.93456 257 6 0.79167 12 0 0.95833 26 2 0.94444 32 2 1.00000 31 2 0.33333 22 2 NA 0 0 0.89326 326 6 0.99123 106 6 0.95632 287 6 0.94444 31 2 1.00000 6 0 0.95018 79 6 0.97222 40 6 0.96783 158 6 0.98561 271 6 0.92690 59 6 1.00000 27 3 0.97643 133 6 0.96826 282 6 0.96799 266 6 0.93674 256 6 0.85418 174 6 0.907407 133 6 1.00000 78 2 0.62500 56 4 0.85043 108 6 0.866313 301 6 0.84714 381 6 0.79299 239 6 0.86023 371 6 0.86861 81 6 0.88008 339 6 0.94829 0.89041 0.92181 0.93212 1.00000 0.94630 0.95209 0.97257 1.00000 1.00000 0.94108 0.81481 0.93827 0.95885 1.00000 0.50617 NA 0.90397 0.99350 0.96174 0.91358 1.00000 0.94163 0.97942 0.97309 0.98441 0.93156 1.00000 0.97843 0.97032 0.96091 0.93030 0.87412 0.93141 0.89169 0.80230 0.88406 0.89144 0.88286 0.84267 0.89385 0.86609 0.90196 0 0.93813 0.96393 -0.0258854 6 0.93784 0.96477 -0.026931 0.998577 0.0212097 weaklyHypometh 1 1 insignificant 0.94505 0.174411 insignificant 1 1 insignificant -0.05207156 0.151834 lowCoverage 1 lowCoverage 0.93813 0.87412 0.075800 6 0.93784 0.85601 0.081834 8.5825e-07 0.18810 weaklyHypermeth 2.9595e-05 1 weaklyHypermeth 3.0219e-02 0.55354 weaklyHypermeth 6.9873e-01 1 insignificant 0.063758 3.2095e-01 lowCoverage 1.0000e+00 lowCoverage 0.93813 0.84266 0.0888310 6 0.93784 0.84727 0.0905771 1.2420e-07 0.714454 weaklyHypermeth 2.4840e-05 1 weaklyHypermeth 2.4675e-04 0.9997747 weaklyHypermeth 0.0616884 1 weaklyHypermeth 0.064506 0.0991891 lowCoverage 1.00000 lowCoverage 0.96393 0.87412 0.0964177 6 0.96477 0.85601 0.10876539 5.7275e-07 0.56374 weaklyHypermeth 3.0145e-05 1 weaklyHypermeth 6.4075e-03 0.84387 weaklyHypermeth 2.1358e-01 1 insignificant 0.1158300 7.0557e-02 lowCoverage 1.0000e+00 lowCoverage 0.96393 0.84266 0.1038873 6 0.96477 0.84727 0.117508 4.0418e-17 0.97173 weaklyHypermeth 4.0418e-14 1 weaklyHypermeth 3.8929e-07 0.99960 weaklyHypermeth 0.00038929 1 weaklyHypermeth 0.1165780 0.0005464 lowCoverage 0.42018 lowCoverage 0.87412 0.84266 0.0069306 6 0.85601 0.84727 0.0087427 0.00043339 1.1667e-01 weaklyHypermeth 0.21669 1.0000e+00 insignificant 0.0062362 5.0528e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.00074803 9.8916e-01 insignificant 1.0000e+00 insignificant chr9 8664184 8665184 90862 C9orf123 ENSG00000137038 0.77791 258 5 0.62981 39 3 0.40000 33 5 0.72323 267 5 0.64095 71 5 0.69622 198 3 0.72848 106 5 0.45346 72 3 0.59286 29 3 0.52381 30 5 0.73521 146 4 0.66110 41 4 0.62331 65 5 0.64617 69 5 0.74814 48 5 0.60000 33 5 NA 0 0 0.64093 109 5 0.68006 31 3 0.69613 101 3 0.58333 36 3 0.66667 21 3 0.66355 141 5 0.82500 35 4 0.53784 69 4 0.66733 102 5 0.61255 77 3 0.48667 37 4 0.63929 47 5 1.00000 45 3 0.58048 64 3 0.75893 104 3 0.49123 109 5 0.340486 118 3 0.63415 145 5 1.00000 3 0 0.54110 68 5 0.585714 88 3 0.65224 234 5 0.67971 240 7 0.75489 313 5 0.71331 145 5 0.66563 230 5 0.85962 0.74701 0.58372 0.88908 0.82350 0.84501 0.84778 0.79751 0.81183 0.89094 0.87506 0.85381 0.90232 0.85997 0.83264 0.88172 NA 0.90241 0.87673 0.90403 0.91398 0.86022 0.78043 0.89946 0.78837 0.83026 0.78432 0.67312 0.91129 0.90766 0.85228 0.88710 0.56779 0.49293 0.58274 NA 0.67535 0.61290 0.87700 0.87117 0.85496 0.90125 0.82380 3 0.72795 0.74807 0.0169193 5 0.66611 0.59616 0.069953 0.231543 0.9478240 insignificant 1 1 insignificant 0.37512 0.595674 insignificant 1 1 insignificant -0.02648095 0.571411 lowCoverage 1 lowCoverage 0.72795 0.58757 0.244123 5 0.66611 0.62124 0.044876 1.8601e-10 0.79481 hypermethylated 1.3286e-08 1 hypermethylated 4.1185e-03 0.85194 weaklyHypermeth 1.4744e-01 1 insignificant 0.043208 6.5945e-01 lowCoverage 1.0000e+00 lowCoverage 0.72795 0.73838 0.0017862 5 0.66611 0.71783 -0.0517110 6.3058e-01 0.636843 insignificant 1.0000e+00 1 insignificant 7.5682e-01 0.4733486 insignificant 1.0000000 1 insignificant -0.051169 0.0972323 lowCoverage 1.00000 lowCoverage 0.74807 0.58757 0.2189393 5 0.59616 0.62124 -0.02507732 1.6140e-05 0.99178 hypermethylated 5.3801e-04 1 hypermethylated 1.3816e-02 0.98521 weaklyHypermeth 3.6358e-01 1 insignificant 0.0696890 5.0274e-01 lowCoverage 1.0000e+00 lowCoverage 0.74807 0.73838 -0.0153656 5 0.59616 0.71783 -0.121664 9.6189e-01 0.76965 insignificant 1.0000e+00 1 insignificant 9.4970e-01 0.59926 insignificant 1.00000000 1 insignificant -0.0246883 0.5842648 lowCoverage 1.00000 lowCoverage 0.58757 0.73838 -0.2595397 5 0.62124 0.71783 -0.0965865 0.98188505 4.4156e-03 weaklyHypometh 1.00000 1.5717e-01 insignificant 0.9941878 6.2959e-02 insignificant 1 1.0000e+00 insignificant -0.09437733 3.4887e-01 lowCoverage 1.0000e+00 lowCoverage chr9 9133865 9134865 90938 RPS26P3 ENSG00000212829 0.72258 239 5 0.58008 176 5 0.56344 143 5 0.52406 143 5 0.66048 61 5 0.55581 145 5 0.61400 55 5 0.67791 110 5 0.60357 50 5 0.65119 36 3 0.66330 162 5 0.54234 39 5 0.74061 86 5 0.65507 67 3 0.57867 81 5 0.68667 25 4 0.27222 19 2 0.51933 164 6 0.74621 118 5 0.73810 103 5 0.64286 27 2 0.75667 23 3 0.76577 154 5 0.67667 44 5 0.48179 43 5 0.55333 189 5 0.68325 56 5 0.36667 28 2 0.70706 111 5 0.77349 229 5 0.69228 159 5 0.62314 94 5 0.52756 111 5 0.542308 102 5 0.61939 118 5 1.00000 2 0 0.60417 85 5 0.659433 119 5 0.73549 269 5 0.62377 271 5 0.64952 226 5 0.68856 210 5 0.69823 197 5 0.60461 0.63234 0.50696 0.57359 0.60680 0.62033 0.49018 0.59051 0.54619 0.53754 0.60495 0.47025 0.55098 0.57797 0.51128 0.63108 0.52830 0.56418 0.63194 0.66491 0.55451 0.68722 0.60461 0.58747 0.39064 0.60403 0.61560 0.34060 0.63052 0.71075 0.61597 0.54331 0.48147 0.47782 0.47813 0.58290 0.44989 0.58991 0.60353 0.61885 0.59424 0.63045 0.65465 2 0.56535 0.61020 -0.0287853 5 0.69454 0.70416 -0.009621 0.966357 0.0555870 insignificant 1 1 insignificant 0.88168 0.215482 insignificant 1 1 insignificant -0.02879850 0.509614 lowCoverage 1 lowCoverage 0.56485 0.49721 0.086870 5 0.55168 0.69222 -0.140533 7.5592e-04 0.89218 weaklyHypermeth 1.8898e-02 1 weaklyHypermeth 2.6176e-02 0.72925 weaklyHypermeth 6.5440e-01 1 insignificant -0.044028 5.7870e-01 lowCoverage 1.0000e+00 lowCoverage 0.56556 0.56692 -0.0336641 5 0.73272 0.67131 0.0614108 9.9908e-01 0.360641 insignificant 1.0000e+00 1 insignificant 9.9846e-01 0.2925993 insignificant 1.0000000 1 insignificant -0.064334 0.0542460 lowCoverage 1.00000 lowCoverage 0.60986 0.49627 0.1157960 5 0.65486 0.64092 0.01393619 1.2961e-06 0.90253 weaklyHypermeth 5.6353e-05 1 weaklyHypermeth 3.9645e-03 0.86946 weaklyHypermeth 1.7237e-01 1 insignificant -0.0152297 8.5299e-01 lowCoverage 1.0000e+00 lowCoverage 0.61020 0.56741 -0.0042564 5 0.70416 0.76721 -0.063052 6.9825e-01 0.76971 insignificant 1.0000e+00 1 insignificant 8.9916e-01 0.50928 insignificant 1.00000000 1 insignificant -0.0355353 0.3926244 lowCoverage 1.00000 lowCoverage 0.49627 0.56704 -0.1217192 5 0.64092 0.72842 -0.0874973 0.96555267 2.9584e-04 weaklyHypometh 1.00000 1.6436e-02 weaklyHypometh 0.9497028 2.4341e-03 weaklyHypometh 1 2.0284e-01 insignificant -0.02030562 7.9267e-01 lowCoverage 1.0000e+00 lowCoverage chr9 14858678 14859678 91552 ENSG00000199814 0.80369 194 5 0.87918 303 6 0.73611 49 5 0.77041 170 5 0.80208 60 3 0.87346 206 5 0.92525 56 5 0.81725 66 3 0.92361 37 5 0.90000 21 3 0.93895 220 6 0.50000 9 0 0.41026 40 3 1.00000 30 5 0.87333 37 3 0.75000 5 0 NA 0 0 0.72982 188 3 0.89860 104 5 0.72306 168 5 0.48889 22 3 0.00000 5 0 0.87302 107 5 0.96481 50 5 0.76999 142 6 0.94144 167 6 0.84286 36 3 1.00000 24 3 0.88080 141 5 0.95495 232 6 0.93444 266 6 0.92615 177 5 0.78615 144 6 0.68976 143 5 0.80000 87 4 0.79762 47 6 0.64265 149 6 0.60727 253 6 0.043439 314 5 0.13133 220 5 0.096736 278 5 0.33444 140 3 0.23819 312 6 0.78022 0.82475 0.65459 0.66745 0.83016 0.84210 0.89246 0.77346 0.94112 0.97283 0.93984 0.53402 0.60981 1.00000 0.81667 0.69706 NA 0.52324 0.93281 0.80756 0.57536 0.00000 0.79594 0.98853 0.77835 0.89483 0.97174 1.00000 0.88786 0.94855 0.94088 0.91854 0.83829 0.70518 0.97723 0.71739 0.74670 0.54976 0.064836 0.17352 0.10705 0.25519 0.24180 3 0.79847 0.89774 -0.0980254 5 0.70851 0.77753 -0.069026 1.00000 0.00045635 weaklyHypometh 1 0.40246 insignificant 0.99618 0.252072 insignificant 1 1 insignificant 0.0047865 0.957842 lowCoverage 1 lowCoverage 0.79847 0.72053 0.075217 5 0.70851 0.63315 0.075355 9.1146e-03 0.74582 weaklyHypermeth 0.4557284 1 insignificant 0.1529809 0.83507 insignificant 1.00000 1 insignificant 0.0823246 0.109776 lowCoverage 1 lowCoverage 0.79888 0.15269 0.641114 5 0.82659 0.14319 0.683397 1.1228e-44 1.0000000 hypermethylated 1.1228e-41 1.00000 hypermethylated 1.2785e-12 1.0000000 hypermethylated 1.2785e-09 1 hypermethylated 0.634071 9.4769e-06 lowCoverage 0.003159 lowCoverage 0.89774 0.72053 0.175828 6 0.77753 0.63315 0.144381 8.1491e-05 0.99996 weaklyHypermeth 0.0062685 1 weaklyHypermeth 0.0454017 0.99146 weaklyHypermeth 1.00000 1 insignificant 0.077538 0.4004786 lowCoverage 1.00000 lowCoverage 0.89839 0.15269 0.741310 5 0.90712 0.14319 0.763927 7.3879e-48 1.000000 hypermethylated 7.388e-45 1 hypermethylated 1.3265e-08 1.000000 hypermethylated 1.3265e-05 1 hypermethylated 0.6292843 1.1059e-05 lowCoverage 0.0055293 lowCoverage 0.72229 0.15269 0.563058 5 0.73868 0.14319 0.595483 1.3370e-19 1.0000e+00 hypermethylated 1.3370e-16 1.0000000 hypermethylated 8.0096e-08 1.0000000 hypermethylated 8.0096e-05 1.00000 hypermethylated 0.551746 4.1796e-05 lowCoverage 0.020898 lowCoverage chr9 15821023 15822023 91592 ENSG00000207360 0.91602 71 5 0.90063 30 3 0.75455 27 2 0.90000 45 3 0.70000 12 2 0.75170 101 5 0.30000 7 0 0.86111 33 2 1.00000 15 2 0.93810 23 2 0.80214 51 5 0.93333 11 2 0.93333 24 2 NA 0 0 0.95536 23 2 0.77778 7 0 0.83333 11 0 0.89444 34 3 0.78384 61 4 0.84996 94 5 1.00000 13 2 0.80714 21 3 0.80445 65 5 0.81250 20 2 0.86667 11 0 0.83738 60 4 1.00000 15 2 1.00000 6 0 0.93333 12 0 0.84778 77 5 0.85682 55 4 0.84343 129 5 0.52961 66 5 0.66286 37 2 0.65257 65 4 0.80000 5 0 0.67500 19 2 0.80198 68 5 0.877778 60 5 0.85354 60 5 0.950735 47 4 0.82952 37 2 0.82313 66 3 0.97258 0.91204 0.65530 0.89694 0.83333 0.82991 0.29167 0.95833 1.00000 0.87103 0.87946 0.88026 0.88026 NA 0.88839 0.68581 0.80801 0.96528 0.90067 0.87763 1.00000 0.93469 0.81205 0.93750 0.94444 0.86558 0.96754 1.00000 0.97222 0.81278 0.91004 0.92180 0.58286 0.63095 0.35869 0.91667 0.90625 0.76011 0.949074 0.97685 0.97947 0.97063 0.75964 0 0.82794 0.80992 -0.0014995 5 0.83626 0.86558 -0.029322 0.46068 0.11165649 insignificant 1 1.00000 insignificant 0.77621 0.065481 insignificant 1 1 insignificant -0.0533032 0.208934 lowCoverage 1 lowCoverage 0.82794 0.66923 0.151466 4 0.83626 0.68315 0.153110 3.2984e-05 0.99924 lowCoverage 0.0032984 1 lowCoverage 0.0036332 0.99813 lowCoverage 0.30277 1 lowCoverage 0.1438208 0.020860 lowCoverage 1 lowCoverage 0.82764 0.84815 -0.044175 5 0.83208 0.87438 -0.042299 9.2594e-01 0.1309197 insignificant 1.0000e+00 1.00000 insignificant 8.8761e-01 0.1393636 insignificant 1.0000e+00 1 insignificant -0.036118 3.9783e-01 lowCoverage 1.000000 lowCoverage 0.80992 0.66923 0.136183 4 0.86558 0.68315 0.182432 7.6160e-06 0.99967 lowCoverage 0.0007616 1 lowCoverage 0.0019926 0.99989 lowCoverage 0.18114 1 lowCoverage 0.197124 0.0032397 lowCoverage 0.53994 lowCoverage 0.80873 0.84815 -0.059031 5 0.83869 0.87438 -0.035684 7.5688e-01 0.020457 weaklyHypometh 1.000e+00 1 insignificant 8.5671e-01 0.318407 insignificant 1.0000e+00 1 insignificant 0.0171849 6.0335e-01 lowCoverage 1.0000000 lowCoverage 0.66926 0.84815 -0.187583 4 0.68644 0.87438 -0.187936 9.9706e-01 1.4992e-05 lowCoverage 1.0000e+00 0.0024987 lowCoverage 9.9838e-01 0.0016765 lowCoverage 1.0000e+00 0.28005 lowCoverage -0.179939 6.0474e-03 lowCoverage 1.000000 lowCoverage chr9 16661519 16662519 91808 C9orf92 ENSG00000205549 0.82145 117 6 0.58437 119 6 0.55000 47 6 0.70687 102 6 0.51831 79 6 0.67075 61 5 0.43866 52 3 0.69274 66 5 0.88095 23 1 0.71647 43 6 0.69423 148 6 0.81944 31 1 0.72985 97 6 0.62500 48 6 0.73556 70 6 0.86607 26 3 0.65000 20 1 0.63719 105 3 0.82051 43 3 0.54074 34 5 0.94444 18 0 0.93333 9 0 0.67298 77 6 0.49306 26 3 0.79710 56 2 0.67765 94 4 0.81944 24 2 0.69444 9 0 0.75332 75 6 0.83808 104 5 0.75325 126 5 0.62381 67 5 0.66029 110 6 0.52747 72 5 0.59375 52 3 0.58333 11 0 0.49755 52 3 0.70679 64 5 0.685786 83 6 0.87158 104 6 0.760462 83 6 0.73776 87 6 0.66090 93 6 0.84448 0.57513 0.62830 0.77224 0.64620 0.72048 0.54782 0.80519 0.91509 0.77136 0.73462 0.79717 0.79911 0.70283 0.84125 0.85344 NA 0.73829 0.77736 0.61258 0.90566 0.87232 0.74571 0.54953 0.82527 0.74327 0.76101 0.64062 0.77292 0.86172 0.78559 0.63585 0.71424 0.63876 0.70281 0.70752 0.69571 0.69871 0.751899 0.87346 0.78445 0.82214 0.73052 0 0.70827 0.74599 -0.0356378 5 0.62566 0.77704 -0.151378 0.99924 0.51668462 insignificant 1 1.00000 insignificant 0.98360 0.240064 insignificant 1 1 insignificant -0.0651182 0.170433 lowCoverage 1 lowCoverage 0.70761 0.65651 0.052025 6 0.55079 0.52657 0.024224 1.6865e-01 0.99888 insignificant 1.0000000 1 insignificant 0.3596937 0.99937 insignificant 1.00000 1 insignificant 0.0900928 0.051478 lowCoverage 1 lowCoverage 0.70875 0.80222 -0.058868 6 0.66185 0.77815 -0.116305 9.4840e-01 0.0338965 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.3200e-01 0.0673119 insignificant 1.0000e+00 1 insignificant -0.058340 2.3229e-01 lowCoverage 1.000000 lowCoverage 0.74524 0.65651 0.085961 5 0.73245 0.52657 0.205878 3.5687e-02 1.00000 weaklyHypermeth 1.0000000 1 insignificant 0.0513628 0.99322 insignificant 1.00000 1 insignificant 0.155211 0.0064530 lowCoverage 0.92186 lowCoverage 0.74222 0.80222 -0.012807 5 0.61778 0.77815 -0.160371 6.9144e-01 0.419028 insignificant 1.000e+00 1 insignificant 4.9556e-01 0.371151 insignificant 1.0000e+00 1 insignificant 0.0067780 8.9888e-01 lowCoverage 1.0000000 lowCoverage 0.66106 0.80222 -0.098495 6 0.68081 0.77815 -0.097339 9.9863e-01 9.1813e-04 weaklyHypometh 1.0000e+00 0.0655809 weaklyHypometh 9.6373e-01 0.0136555 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.148433 1.4853e-02 lowCoverage 1.000000 lowCoverage chr9 16733176 16734176 91849 C9orf92 ENSG00000205549 0.73510 198 6 0.85720 83 6 0.75994 102 6 0.77193 86 6 0.78145 60 5 0.80354 195 6 0.68921 76 6 0.79967 82 6 0.74153 68 6 0.84381 84 6 0.79267 183 6 0.71355 71 6 0.80412 94 6 NA 0 0 0.75613 106 6 0.72560 35 4 0.84208 76 6 0.87412 95 3 0.79375 116 6 0.78638 174 6 0.89563 26 3 0.84621 43 3 0.78463 132 6 0.79167 16 1 0.85417 33 3 0.80407 162 6 0.80794 33 5 0.86667 22 3 0.81123 65 6 0.83800 142 6 0.72194 132 6 0.80097 262 6 0.68143 63 6 0.60303 68 6 0.75289 103 6 0.85606 61 6 0.80522 44 5 0.65585 105 6 0.836175 194 6 0.82331 160 6 0.794679 121 6 0.88142 194 6 0.86865 204 6 0.76927 0.85994 0.79430 0.79980 0.80808 0.82081 0.70964 0.81090 0.75369 0.85653 0.81629 0.72508 0.82189 NA 0.78114 0.74544 0.85199 0.90107 0.81122 0.78249 0.87710 0.83846 0.79396 0.76923 0.86122 0.83486 0.84377 0.86701 0.82245 0.86536 0.74391 0.81778 0.71621 0.59380 0.75506 0.85573 0.81752 0.66373 0.864319 0.83431 0.81906 0.89995 0.87748 1 0.78226 0.80618 -0.0213866 6 0.77850 0.80112 -0.022620 0.96100 0.06151734 insignificant 1 1.00000 insignificant 0.98022 0.075982 insignificant 1 1 insignificant -0.0358671 0.049285 lowCoverage 1 lowCoverage 0.78226 0.71622 0.071494 6 0.77850 0.71319 0.065314 5.7028e-05 0.90057 weaklyHypermeth 0.0047524 1 weaklyHypermeth 0.0091301 0.94241 weaklyHypermeth 0.65215 1 insignificant 0.0569795 0.212706 insignificant 1 insignificant 0.78226 0.83963 -0.062304 6 0.77850 0.84168 -0.063176 9.9997e-01 0.0014659 weaklyHypometh 1.0000e+00 0.73297 insignificant 9.9983e-01 0.0058985 weaklyHypometh 1.0000e+00 1 insignificant -0.058121 1.5138e-02 weaklyHypometh 1.000000 insignificant 0.80618 0.71622 0.091232 6 0.80112 0.71319 0.087934 2.4366e-05 0.96923 weaklyHypermeth 0.0020305 1 weaklyHypermeth 0.0033635 0.99070 weaklyHypermeth 0.25873 1 insignificant 0.092847 0.0643929 lowCoverage 1.00000 lowCoverage 0.80618 0.83963 -0.042215 6 0.80112 0.84168 -0.040557 9.8098e-01 0.018690 weaklyHypometh 1.000e+00 1 insignificant 9.2390e-01 0.157041 insignificant 1.0000e+00 1 insignificant -0.0222540 3.0069e-01 lowCoverage 1.0000000 lowCoverage 0.71622 0.83963 -0.135937 6 0.71319 0.84168 -0.128491 9.9912e-01 8.4716e-05 weaklyHypometh 1.0000e+00 0.0084716 weaklyHypometh 9.9612e-01 0.0033711 weaklyHypometh 1.0000e+00 0.42138 insignificant -0.115101 3.1416e-02 weaklyHypometh 1.000000 insignificant chr9 16755720 16756720 91856 C9orf92 ENSG00000205549 0.72333 328 9 0.62708 187 9 0.68707 171 9 0.71195 218 9 0.72559 73 8 0.67955 249 9 0.48882 107 9 0.76656 191 9 0.70463 75 9 0.52320 80 9 0.65711 282 9 0.81481 27 0 0.82428 201 9 0.84683 80 8 0.73031 106 9 0.90000 26 3 0.75000 4 0 0.65827 300 9 0.79272 188 5 0.68196 209 9 0.86772 43 4 1.00000 4 0 0.76420 176 9 0.81196 57 5 0.84127 37 4 0.73196 245 9 0.75343 90 9 0.55556 23 1 0.72660 231 9 0.69184 223 9 0.70771 258 9 0.69738 234 9 0.75352 175 9 0.63971 192 9 0.72410 159 9 0.77778 9 0 0.55819 84 9 0.74119 278 9 0.836209 259 9 0.70803 264 9 0.779708 255 9 0.74965 256 9 0.77325 207 9 0.73657 0.62301 0.68824 0.70908 0.72807 0.68059 0.54705 0.76350 0.70307 0.75831 0.72466 0.82105 0.81824 0.84248 0.72727 0.85731 0.72321 0.69203 0.78750 0.68120 0.86216 0.83885 0.76103 0.80404 0.83910 0.73430 0.75608 0.56316 0.74432 0.69125 0.70593 0.69604 0.74841 0.63381 0.60154 0.77895 0.55649 0.71039 0.797815 0.75357 0.77659 0.72232 0.77151 0 0.71641 0.72610 -0.0088635 9 0.68035 0.71192 -0.031567 0.61226 0.17933029 insignificant 1 1.00000 insignificant 0.92343 0.045567 weaklyHypometh 1 1 insignificant -0.0477636 0.232243 insignificant 1 insignificant 0.71567 0.64660 0.064729 9 0.63673 0.78086 -0.144133 4.7136e-02 0.93808 weaklyHypermeth 1.0000000 1 insignificant 0.3363917 0.93193 insignificant 1.00000 1 insignificant 0.0156204 0.709897 insignificant 1 insignificant 0.71613 0.75826 -0.045657 9 0.65887 0.78868 -0.129813 9.9962e-01 0.0049956 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9881e-01 0.0978393 insignificant 1.0000e+00 1 insignificant -0.054665 9.4945e-02 insignificant 1.000000 insignificant 0.72610 0.64581 0.076400 9 0.71192 0.74434 -0.032422 1.4511e-02 1.00000 weaklyHypermeth 0.6909800 1 insignificant 0.0470569 0.99985 weaklyHypermeth 1.00000 1 insignificant 0.063384 0.1972985 insignificant 1.00000 insignificant 0.72576 0.75829 -0.035271 9 0.65430 0.79255 -0.138246 9.8756e-01 0.130658 insignificant 1.000e+00 1 insignificant 5.9457e-01 0.550748 insignificant 1.0000e+00 1 insignificant -0.0069014 8.5854e-01 insignificant 1.0000000 insignificant 0.64541 0.75826 -0.113140 9 0.72110 0.78868 -0.067582 9.9999e-01 2.0812e-04 weaklyHypometh 1.0000e+00 0.0189203 weaklyHypometh 9.9984e-01 0.0484524 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.070285 1.1690e-01 insignificant 1.000000 insignificant chr9 16802128 16803128 91871 ENSG00000218275 0.82190 101 5 0.77849 93 5 0.38889 30 2 0.79938 124 5 0.90909 46 4 0.75425 167 5 0.63619 21 2 0.85048 76 5 0.79000 33 5 0.72222 14 1 0.80767 115 5 0.14286 7 0 0.90606 65 5 0.86182 51 5 0.78881 51 5 0.83333 4 0 0.77778 9 0 0.74355 83 5 0.62777 73 5 0.84827 81 5 0.64583 18 1 0.83000 48 5 0.84225 61 5 0.62222 21 1 0.87436 59 5 0.76852 91 5 0.90175 34 1 0.57143 9 0 0.79601 43 4 0.86779 92 5 0.82225 105 5 0.86748 171 5 0.67505 72 5 0.80649 58 5 0.69652 63 5 1.00000 4 0 0.57000 36 4 0.73254 99 5 0.892857 95 5 0.78476 102 5 0.921667 77 5 0.91556 57 5 0.84844 96 5 0.82136 0.78284 0.32323 0.78816 0.90634 0.78016 0.65224 0.87374 0.81364 0.81818 0.78226 0.33333 0.89772 0.87879 0.77711 0.71692 0.77778 0.88433 0.73706 0.80556 0.66750 0.85606 0.79995 0.63300 0.89472 0.75253 0.87666 0.46970 0.77082 0.82230 0.82199 0.83284 0.75461 0.78599 0.70632 0.93020 0.57323 0.74447 0.865152 0.90064 0.92045 0.90909 0.84946 0 0.78939 0.80851 -0.0169042 5 0.65285 0.84148 -0.188632 0.97847 0.38383134 insignificant 1 1.00000 insignificant 0.95384 0.354940 insignificant 1 1 insignificant -0.0447177 0.393837 lowCoverage 1 lowCoverage 0.79066 0.72590 0.065475 5 0.74611 0.68090 0.065214 2.5863e-02 0.98265 weaklyHypermeth 1.0000000 1 insignificant 0.1564703 0.96691 insignificant 1.00000 1 insignificant -0.0073275 0.921178 lowCoverage 1 lowCoverage 0.79066 0.87559 -0.089687 5 0.74611 0.90927 -0.163161 9.9978e-01 0.0091541 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9999e-01 0.0082853 weaklyHypometh 1.0000e+00 1 insignificant -0.133215 1.1277e-02 lowCoverage 1.000000 lowCoverage 0.80826 0.72590 0.081750 5 0.81883 0.68090 0.137936 4.1064e-04 0.99980 weaklyHypermeth 0.0273762 1 weaklyHypermeth 0.0390276 0.99655 weaklyHypermeth 1.00000 1 insignificant 0.037390 0.5955528 lowCoverage 1.00000 lowCoverage 0.80826 0.87559 -0.074259 5 0.81883 0.90927 -0.090438 9.9996e-01 0.023735 weaklyHypometh 1.000e+00 1 insignificant 9.9999e-01 0.037212 weaklyHypometh 1.0000e+00 1 insignificant -0.0884973 4.7743e-02 lowCoverage 1.0000000 lowCoverage 0.72590 0.87559 -0.155708 5 0.68090 0.90927 -0.228374 1.0000e+00 1.2930e-05 weaklyHypometh 1.0000e+00 0.0024987 weaklyHypometh 1.0000e+00 0.0016803 weaklyHypometh 1.0000e+00 0.28005 insignificant -0.125887 9.5267e-02 lowCoverage 1.000000 lowCoverage chr9 26209290 26210290 92862 ENSG00000196478 0.70874 115 8 0.61374 165 8 0.54636 138 8 0.76283 130 6 0.66731 61 8 0.80179 239 8 0.7959 119 8 0.73859 134 8 0.65371 86 8 0.7252 55 4 0.79707 295 8 0.70833 66 5 0.69744 53 6 0.83676 77 6 0.63551 84 5 0.89273 77 3 0.00000 5 1 0.78131 103 5 0.80634 137 5 0.75645 156 8 0.74722 35 3 0.64727 31 5 0.63460 97 8 0.64075 58 8 0.84375 43 4 0.79390 185 8 0.72462 106 5 0.74986 39 3 0.64564 105 5 0.57469 240 8 0.62932 225 8 0.72279 197 8 0.61036 80 6 0.5506 66 6 0.52986 117 6 0.00000 3 0 0.55329 227 6 0.62003 203 8 0.63628 142 8 0.61839 99 8 0.59856 90 6 0.68125 31 3 0.57987 126 8 0.81029 0.63782 0.70088 0.79447 0.64013 0.87124 0.83477 0.77641 0.72176 0.80738 0.85021 0.71958 0.71311 0.84843 0.71644 0.77741 NA 0.75376 0.7682 0.71599 0.72046 0.69979 0.67825 0.58941 0.90079 0.81530 0.66793 0.55678 0.76545 0.65754 0.60205 0.81419 0.68913 0.60374 0.70421 0.61916 0.70054 0.67475 0.73777 0.70393 0.6718 0.59286 0.70411 2 0.75207 0.70956 0.050328 8 0.72322 0.68849 0.034728 0.061816 0.96992 insignificant 1 1 insignificant 0.21182 0.963265 insignificant 1 1 insignificant 0.00010457 0.99824 insignificant 1 insignificant 0.75207 0.6446 0.10028 8 0.72322 0.59955 0.123666 6.4192e-05 0.99484 weaklyHypermeth 0.0064192 1 weaklyHypermeth 4.2157e-05 0.97165 weaklyHypermeth 0.010539 1 weaklyHypermeth 0.218949 0.075875 insignificant 1 insignificant 0.75207 0.64959 0.076195 6 0.72322 0.61296 0.110256 0.00011278 0.997754 weaklyHypermeth 0.037593 1 weaklyHypermeth 0.025608 0.99785 weaklyHypermeth 1 1 insignificant 0.073436 0.113141 insignificant 1 insignificant 0.70904 0.64368 0.050825 8 0.61199 0.53293 0.079056 0.0034488 0.88499 weaklyHypermeth 0.28740 1 insignificant 0.0110986 0.97093 weaklyHypermeth 1 1 insignificant 0.21884 0.073087 insignificant 1 insignificant 0.70956 0.64959 0.021707 6 0.68849 0.61296 0.075528 0.0033892 0.74442 weaklyHypermeth 0.8473 1 insignificant 0.18334 0.88156 insignificant 1 1 insignificant 0.073332 0.022901 weaklyHypermeth 1 insignificant 0.6446 0.64959 -0.017795 6 0.59955 0.61296 -0.013410 0.41227 0.5041856 insignificant 1 1.00000 insignificant 0.63767 0.269782 insignificant 1 1 insignificant -0.14551 0.194748 insignificant 1 insignificant chr9 26502120 26503120 92906 ENSG00000196478 0.86039 200 6 0.85784 55 5 0.74083 88 5 0.89521 114 6 0.79167 25 2 0.83466 104 5 0.9619 53 3 0.85333 32 3 0.85474 47 3 0.8373 47 4 0.95027 114 5 0.79722 43 5 0.62857 49 3 NA 0 0 0.90079 76 5 0.71310 57 5 0.92143 40 5 0.84182 107 6 0.91186 50 5 0.91885 114 4 0.83333 5 0 0.80871 33 3 0.93262 115 6 0.73333 21 3 0.94167 24 3 0.91513 89 5 0.74444 12 1 0.93810 25 3 0.95960 42 3 0.87877 107 5 0.86360 90 5 0.89452 167 5 0.73782 44 3 0.8125 64 5 0.69829 82 5 0.92063 38 5 0.69551 32 2 0.64928 74 5 0.96883 159 6 0.91491 188 6 0.88651 163 6 0.87887 146 6 0.93015 152 6 0.89096 0.84222 0.80741 0.90282 0.86979 0.86318 0.93998 0.79167 0.78180 0.87584 0.93598 0.71918 0.81721 NA 0.92336 0.82391 0.91443 0.85380 0.9404 0.90835 0.82650 0.78184 0.93854 0.84375 0.91536 0.88422 0.77917 0.91195 0.93592 0.88270 0.81425 0.87884 0.78383 0.77691 0.82231 0.90344 0.87099 0.77108 0.95961 0.92966 0.8249 0.84898 0.89891 2 0.87208 0.88493 -0.011690 5 0.85468 0.89974 -0.045060 0.852204 0.02943 weaklyHypometh 1 1 insignificant 0.93245 0.010074 weaklyHypometh 1 1 insignificant -0.02443490 0.41162 lowCoverage 1 lowCoverage 0.87208 0.7994 0.07028 5 0.85468 0.76082 0.093866 8.2348e-04 0.98942 weaklyHypermeth 0.0748619 1 weaklyHypermeth 3.7149e-02 0.73623 weaklyHypermeth 1.000000 1 insignificant 0.093545 0.072621 lowCoverage 1 lowCoverage 0.87208 0.92079 -0.037447 5 0.85468 0.91649 -0.061811 0.97435387 0.017174 weaklyHypometh 1.000000 1 insignificant 0.948816 0.05309 insignificant 1 1 insignificant -0.069971 0.013295 lowCoverage 1 lowCoverage 0.88493 0.79940 0.083505 5 0.89974 0.76082 0.138926 0.0010396 0.99758 weaklyHypermeth 0.10396 1 insignificant 0.0099078 0.98899 weaklyHypermeth 1 1 insignificant 0.11798 0.033092 lowCoverage 1 lowCoverage 0.88493 0.92079 -0.018139 5 0.89974 0.91649 -0.016751 0.5552621 0.36577 insignificant 1.0000 1 insignificant 0.10208 0.71549 insignificant 1 1 insignificant -0.045537 0.117187 lowCoverage 1 lowCoverage 0.7994 0.92079 -0.102224 5 0.76082 0.91649 -0.155677 0.99969 0.0028249 weaklyHypometh 1 0.28249 insignificant 0.97549 0.084087 insignificant 1 1 insignificant -0.16352 0.008067 lowCoverage 1 lowCoverage chr9 34051769 34052769 93271 ENSG00000210706,ENSG00000222259 0.65717 215 7 0.62322 179 7 0.62711 104 7 0.69545 195 7 0.70000 61 6 0.75194 314 7 0.63507 104 7 0.68805 158 7 0.71673 82 7 0.82240 90 4 0.70110 241 7 0.74841 32 3 0.703188 138 7 0.902041 40 5 0.70619 118 7 0.63030 42 3 0.53443 51 3 0.64298 197 7 0.662967 169 7 0.78260 284 7 0.74405 43 3 0.79136 70 7 0.81430 138 7 0.81453 82 7 0.7029982 79 7 0.79056 196 7 0.85602 96 7 0.64844 45 3 0.84878 137 7 0.76985 245 7 0.721082 203 7 0.73255 348 7 0.62179 157 7 0.75673 98 7 0.69026 161 7 0.81888 23 2 0.65758 92 7 0.56858 213 7 0.756389 219 7 0.77724 173 7 0.823429 173 7 0.562963 163 4 0.74872 181 7 0.69506 0.68007 0.67203 0.75914 0.77242 0.75501 0.67744 0.70020 0.74564 0.78009 0.75685 0.72782 0.744959 0.80672 0.74759 0.64892 0.65225 0.73927 0.81176 0.80686 0.86506 0.887084 0.76062 0.87860 0.923391 0.77502 0.85348 0.80742 0.79627 0.79264 0.738090 0.79036 0.69576 0.67864 0.67643 0.82297 0.77444 0.68630 0.786025 0.79118 0.784157 0.670281 0.81243 2 0.72921 0.78419 -0.0464584 7 0.71231 0.74273 -3.0419e-02 0.92672 0.0029848 weaklyHypometh 1 0.59697 insignificant 0.99165 0.0018935 weaklyHypometh 1 1 insignificant -0.0729751 0.0074988 weaklyHypometh 1 insignificant 0.72921 0.70027 0.036216 7 0.71231 0.65004 0.062270 1.4932e-02 9.7728e-01 weaklyHypermeth 3.4683e-01 1.0000e+00 insignificant 1.7770e-01 8.8373e-01 insignificant 1.00000000 1.00000000 insignificant 0.010932 0.7981172 insignificant 1.00000 insignificant 0.72921 0.765677 -0.0440185 7 0.71231 0.75923 -0.0469195 9.7925e-01 0.057552 insignificant 1.0000e+00 1 insignificant 9.1454e-01 0.090869 insignificant 1.000000 1 insignificant -0.0371807 0.4721591 insignificant 1 insignificant 0.78419 0.70027 0.083046 7 0.74273 0.65004 0.0926890 1.3484e-04 9.9956e-01 weaklyHypermeth 4.4946e-03 1.0000e+00 weaklyHypermeth 9.9489e-03 9.9967e-01 weaklyHypermeth 0.31090308 1.0000000 insignificant 0.0839067 0.0790531 insignificant 1.00000 insignificant 0.78419 0.765677 0.0007072 7 0.74273 0.75923 -0.01650039 3.8052e-01 0.34569 insignificant 1.0000e+00 1 insignificant 2.0373e-01 0.76222 insignificant 1.0000000 1 insignificant 0.0357944 0.488032 insignificant 1 insignificant 0.70027 0.765677 -0.0779257 7 0.65004 0.75923 -0.109189 9.9828e-01 4.7108e-03 weaklyHypometh 1.00000000 1.5703e-01 insignificant 9.5396e-01 0.05619951 insignificant 1.00000000 1.000000 insignificant -0.048112 0.43057749 insignificant 1.000000 insignificant chr9 34543302 34544302 93305 ENSG00000218224 0.85618 134 5 0.91515 65 5 0.37321 54 5 0.86832 208 5 0.87500 6 0 0.74795 143 5 0.58929 30 3 0.82311 82 5 0.90545 33 3 0.96364 35 3 0.85569 83 5 0.33333 11 0 0.909048 75 5 NA 0 0 0.82198 47 5 0.00000 5 0 0.52000 17 1 0.68787 226 5 0.711696 48 2 0.84451 61 5 0.39683 22 2 0.71944 75 5 0.78254 38 5 0.67361 45 5 0.8684066 67 5 0.80246 94 5 0.90825 44 5 0.84848 21 2 0.88092 43 2 0.96131 107 5 0.916836 78 4 0.86435 146 5 0.48929 40 5 0.44956 106 5 0.73666 112 3 0.32091 41 3 0.85333 24 3 0.31268 86 5 0.663451 131 5 0.66508 107 5 0.603790 112 5 0.392081 146 5 0.65523 121 5 0.83066 0.90606 0.42286 0.84976 0.85869 0.73390 0.44286 0.81523 0.91455 0.95636 0.84196 0.40997 0.893762 NA 0.78637 0.00000 0.46500 0.66003 0.68570 0.84112 0.55143 0.714222 0.78786 0.87833 0.814396 0.79096 0.91644 0.84818 0.84211 0.94811 0.883060 0.83808 0.40964 0.43478 0.63239 0.27345 0.81200 0.25122 0.622445 0.64421 0.569970 0.399565 0.64673 0 0.79310 0.84615 -0.0508599 5 0.82928 0.69709 1.3219e-01 0.98068 0.1176275 insignificant 1 1.00000 insignificant 0.94596 0.0673619 insignificant 1 1 insignificant -0.0860883 0.2441048 lowCoverage 1 lowCoverage 0.79295 0.55746 0.242671 5 0.79513 0.54332 0.251810 1.8195e-07 1.0000e+00 hypermethylated 1.2130e-05 1.0000e+00 hypermethylated 3.9199e-03 9.9962e-01 weaklyHypermeth 0.15076487 1.00000000 insignificant 0.188793 0.1109875 lowCoverage 1.00000 lowCoverage 0.79295 0.567261 0.2043890 5 0.79513 0.58699 0.2081451 2.3502e-06 0.999994 hypermethylated 5.8754e-04 1 hypermethylated 6.6475e-04 0.999960 hypermethylated 0.094964 1 hypermethylated 0.1199387 0.1438582 lowCoverage 1 lowCoverage 0.84833 0.55746 0.288426 5 0.83651 0.54332 0.2931867 3.8638e-10 9.9999e-01 hypermethylated 5.5197e-08 1.0000e+00 hypermethylated 1.9030e-05 9.9994e-01 hypermethylated 0.00237880 1.0000000 hypermethylated 0.2748813 0.0276708 lowCoverage 1.00000 lowCoverage 0.84833 0.567261 0.2463544 5 0.83651 0.58699 0.24952136 3.7139e-09 1.00000 hypermethylated 1.2380e-06 1 hypermethylated 2.5086e-06 1.00000 hypermethylated 0.0025086 1 hypermethylated 0.2060271 0.013060 lowCoverage 1 lowCoverage 0.55746 0.567261 -0.0049066 5 0.54332 0.58699 -0.043665 7.9353e-01 1.1093e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.3172e-01 0.15366893 insignificant 1.00000000 1.000000 insignificant -0.068854 0.52917502 lowCoverage 1.000000 lowCoverage chr9 34555545 34556545 93311 ENSG00000218224 0.66828 117 5 0.44825 219 6 0.72640 239 5 0.88127 43 1 0.70040 135 5 0.74227 109 5 0.85507 277 4 0.58016 175 5 0.77703 208 5 0.64754 167 4 0.84206 197 6 0.58167 237 4 0.816428 190 5 0.622222 10 1 0.69829 209 4 0.67692 165 4 0.66714 138 4 0.82525 61 5 0.843537 193 5 0.69653 91 5 0.67910 71 4 0.45833 17 1 0.68257 131 6 0.67246 99 6 0.6958997 88 3 0.76769 297 5 0.54460 95 5 0.73498 107 4 0.80443 238 5 0.66212 250 5 0.842089 229 5 0.78800 154 5 0.77339 225 6 0.76465 125 5 0.75998 344 5 0.70833 38 3 0.48701 114 5 0.63258 234 5 0.392429 98 5 0.56888 94 5 0.691667 44 4 0.502381 43 4 0.48175 33 3 0.78377 0.61148 0.76292 0.84823 0.67701 0.78660 0.79595 0.59756 0.68804 0.68494 0.71926 0.71257 0.799808 0.57304 0.71983 0.70771 0.67091 0.79576 0.81592 0.60935 0.70642 0.291667 0.67841 0.69213 0.654107 0.78289 0.77982 0.84127 0.75822 0.76057 0.798006 0.80006 0.78951 0.74096 0.82947 0.88180 0.77946 0.73907 0.391953 0.52841 0.630102 0.554948 0.63508 1 0.73291 0.77252 -0.0368035 5 0.67023 0.57596 9.4270e-02 0.83180 0.1505780 insignificant 1 1.00000 insignificant 0.79827 0.7531952 insignificant 1 1 insignificant 0.0204782 0.6133282 lowCoverage 1 lowCoverage 0.73317 0.79444 -0.063831 5 0.70321 0.55801 0.145201 4.0234e-01 6.9827e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.6664e-01 1.5270e-01 insignificant 1.00000000 1.00000000 insignificant 0.027179 0.6141130 lowCoverage 1.00000 lowCoverage 0.73298 0.506410 0.2327787 5 0.67068 0.47332 0.1973579 9.7022e-12 0.999035 hypermethylated 4.8511e-09 1 hypermethylated 8.4825e-05 0.998383 hypermethylated 0.032512 1 hypermethylated 0.1874143 0.0145268 lowCoverage 1 lowCoverage 0.77252 0.79518 -0.021632 5 0.57596 0.62001 -0.0440467 1.0212e-01 5.1079e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0117e-01 1.0053e-01 insignificant 1.00000000 1.0000000 insignificant 0.0067008 0.9059778 lowCoverage 1.00000 lowCoverage 0.77283 0.506410 0.2649368 5 0.58546 0.47332 0.11213712 1.0533e-10 1.00000 hypermethylated 5.2663e-08 1 hypermethylated 9.1314e-03 0.99786 weaklyHypermeth 0.7403981 1 insignificant 0.1669361 0.023846 lowCoverage 1 lowCoverage 0.79592 0.506410 0.2995854 5 0.69751 0.47332 0.224190 2.7249e-07 1.0000e+00 hypermethylated 0.00010636 1.0000e+00 hypermethylated 1.3448e-02 0.99331041 weaklyHypermeth 1.00000000 1.000000 insignificant 0.160235 0.04271649 lowCoverage 1.000000 lowCoverage chr9 34555899 34556899 93312 ENSG00000218224 0.66828 117 5 0.44825 219 6 0.72640 239 5 0.88127 43 1 0.70040 135 5 0.74227 109 5 0.85507 277 4 0.58016 175 5 0.77703 208 5 0.64754 167 4 0.84206 197 6 0.58167 237 4 0.816428 190 5 0.622222 10 1 0.69829 209 4 0.67692 165 4 0.66714 138 4 0.82525 61 5 0.843537 193 5 0.69653 91 5 0.67910 71 4 0.45833 17 1 0.68257 131 6 0.67246 99 6 0.6958997 88 3 0.76769 297 5 0.54460 95 5 0.73498 107 4 0.80443 238 5 0.66212 250 5 0.842089 229 5 0.78800 154 5 0.77339 225 6 0.76465 125 5 0.75998 344 5 0.70833 38 3 0.48701 114 5 0.63258 234 5 0.392429 98 5 0.56888 94 5 0.691667 44 4 0.502381 43 4 0.48175 33 3 0.78377 0.61148 0.76292 0.84823 0.67701 0.78660 0.79595 0.59756 0.68804 0.68494 0.71926 0.71257 0.799808 0.57304 0.71983 0.70771 0.67091 0.79576 0.81592 0.60935 0.70642 0.291667 0.67841 0.69213 0.654107 0.78289 0.77982 0.84127 0.75822 0.76057 0.798006 0.80006 0.78951 0.74096 0.82947 0.88180 0.77946 0.73907 0.391953 0.52841 0.630102 0.554948 0.63508 1 0.73291 0.77252 -0.0368035 5 0.67023 0.57596 9.4270e-02 0.83180 0.1505780 insignificant 1 1.00000 insignificant 0.79827 0.7531952 insignificant 1 1 insignificant 0.0204782 0.6133282 lowCoverage 1 lowCoverage 0.73317 0.79444 -0.063831 5 0.70321 0.55801 0.145201 4.0234e-01 6.9827e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.6664e-01 1.5270e-01 insignificant 1.00000000 1.00000000 insignificant 0.027179 0.6141130 lowCoverage 1.00000 lowCoverage 0.73298 0.506410 0.2327787 5 0.67068 0.47332 0.1973579 9.7022e-12 0.999035 hypermethylated 4.8511e-09 1 hypermethylated 8.4825e-05 0.998383 hypermethylated 0.032512 1 hypermethylated 0.1874143 0.0145268 lowCoverage 1 lowCoverage 0.77252 0.79518 -0.021632 5 0.57596 0.62001 -0.0440467 1.0212e-01 5.1079e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0117e-01 1.0053e-01 insignificant 1.00000000 1.0000000 insignificant 0.0067008 0.9059778 lowCoverage 1.00000 lowCoverage 0.77283 0.506410 0.2649368 5 0.58546 0.47332 0.11213712 1.0533e-10 1.00000 hypermethylated 5.2663e-08 1 hypermethylated 9.1314e-03 0.99786 weaklyHypermeth 0.7403981 1 insignificant 0.1669361 0.023846 lowCoverage 1 lowCoverage 0.79592 0.506410 0.2995854 5 0.69751 0.47332 0.224190 2.7249e-07 1.0000e+00 hypermethylated 0.00010636 1.0000e+00 hypermethylated 1.3448e-02 0.99331041 weaklyHypermeth 1.00000000 1.000000 insignificant 0.160235 0.04271649 lowCoverage 1.000000 lowCoverage chr9 34563544 34564544 93314 ENSG00000218224 0.74426 110 4 0.47657 103 4 0.73717 91 4 0.80628 37 4 0.58016 32 4 0.84446 130 6 0.70571 54 3 0.60730 106 6 0.81641 89 5 0.94276 80 2 0.80690 133 6 0.76984 41 2 0.646870 125 6 NA 0 0 0.63413 80 4 0.33333 14 1 0.73535 34 2 0.66361 67 4 0.636488 136 6 0.54989 159 6 0.80857 63 6 0.32677 45 5 0.51987 55 3 0.68519 49 4 0.7666667 26 2 0.73857 123 5 0.72718 54 6 0.29048 23 2 0.56026 119 5 0.68619 203 6 0.601515 156 6 0.80479 209 6 0.75887 108 4 0.81172 98 6 1.00000 15 1 0.89028 27 4 0.77670 45 4 0.77363 140 6 0.494948 92 4 0.59160 135 6 0.494444 66 4 0.516549 116 4 0.64689 81 4 0.72106 0.59300 0.80127 0.88337 0.71348 0.81811 0.71434 0.76781 0.66277 0.87279 0.84041 0.75813 0.760517 NA 0.74399 0.30201 0.59634 0.77137 0.82254 0.67115 0.84986 0.552055 0.69040 0.80528 0.790099 0.81022 0.71434 0.62047 0.75326 0.78353 0.740954 0.84103 0.77157 0.79878 NA 0.86097 0.84366 0.84680 0.774439 0.78639 0.758746 0.666374 0.87261 2 0.72178 0.75022 -0.0313146 6 0.67130 0.67620 -4.8932e-03 0.80676 0.2131588 insignificant 1 1.00000 insignificant 0.24174 0.8070475 insignificant 1 1 insignificant 0.0598474 0.3298475 lowCoverage 1 lowCoverage 0.72178 0.81062 -0.087284 4 0.67130 0.78430 -0.112993 9.7048e-01 1.7037e-03 lowCoverage 1.0000e+00 4.7216e-01 lowCoverage 9.8375e-01 4.1487e-03 lowCoverage 1.00000000 1.00000000 lowCoverage -0.149014 0.0109114 lowCoverage 0.68324 lowCoverage 0.72178 0.687755 0.0026566 6 0.67130 0.55784 0.1134653 1.0261e-03 0.313477 weaklyHypermeth 8.5506e-02 1 weaklyHypermeth 5.8975e-04 0.335422 weaklyHypermeth 0.094964 1 weaklyHypermeth 0.1372981 0.0078857 lowCoverage 1 lowCoverage 0.75022 0.81062 -0.054757 4 0.67620 0.78430 -0.1080995 6.7705e-01 2.1970e-03 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7290e-01 9.1065e-04 lowCoverage 1.00000000 0.4553243 lowCoverage -0.2088618 0.0045061 lowCoverage 0.30041 lowCoverage 0.75022 0.687755 0.0321459 6 0.67620 0.55784 0.11835848 1.3059e-02 0.76761 weaklyHypermeth 5.9360e-01 1 insignificant 4.6121e-02 0.57745 weaklyHypermeth 1.0000000 1 insignificant 0.0774507 0.206659 lowCoverage 1 lowCoverage 0.81062 0.687755 0.0866692 4 0.78430 0.55784 0.226458 8.7907e-06 7.4198e-01 lowCoverage 0.00219767 1.0000e+00 lowCoverage 1.8620e-03 0.69679465 lowCoverage 0.93101925 1.000000 lowCoverage 0.286313 0.00024997 lowCoverage 0.049995 lowCoverage chr9 35830683 35831683 93382 TMEM8B ENSG00000137103 0.90935 104 3 0.61793 271 7 0.78674 82 5 0.65846 67 5 0.71310 67 5 0.38296 118 2 0.76818 52 2 0.88534 139 5 0.64762 74 4 0.80697 37 4 0.81154 196 5 0.57143 24 2 0.789231 95 5 0.782609 62 5 0.81650 102 5 0.69286 32 4 NA 0 0 0.93082 138 3 0.775651 422 5 0.92827 140 2 0.73175 44 5 0.80167 51 5 0.82233 113 5 0.79816 103 5 0.9214141 50 5 0.82183 365 8 0.76756 165 5 0.59333 43 5 0.62790 316 5 0.84132 370 9 0.837398 358 8 0.97065 172 5 0.88188 193 6 0.86229 141 5 0.77395 182 5 1.00000 8 0 0.62730 89 5 0.94492 283 7 0.830980 123 5 0.91110 160 5 0.857447 104 2 0.674621 80 3 0.56328 81 4 0.88177 0.69285 0.78608 0.74269 0.76682 0.61698 0.73182 0.86140 0.69454 0.84865 0.85240 0.73720 0.840897 0.84486 0.84173 0.76488 NA 0.91521 0.84435 0.87488 0.78664 0.836528 0.78229 0.83767 0.926271 0.81908 0.73715 0.77687 0.76060 0.87524 0.834570 0.92917 0.93628 0.86683 0.99425 1.00000 0.80782 0.96905 0.866185 0.86330 0.886968 0.763589 0.91474 2 0.84248 0.84791 -0.0070071 5 0.76951 0.82687 -5.7359e-02 0.98127 0.1941884 insignificant 1 1.00000 insignificant 0.98884 0.2864990 insignificant 1 1 insignificant -0.0432649 0.3324349 lowCoverage 1 lowCoverage 0.84248 0.91183 -0.089929 5 0.76951 0.82417 -0.054658 9.9035e-01 3.7016e-04 weaklyHypometh 1.0000e+00 1.8508e-01 insignificant 9.9454e-01 2.2012e-04 weaklyHypometh 1.00000000 0.11006006 insignificant -0.097042 0.1564769 lowCoverage 1.00000 lowCoverage 0.84248 0.859489 -0.0185204 5 0.76951 0.70837 0.0611420 4.8838e-01 0.128801 insignificant 1.0000e+00 1 insignificant 8.9883e-01 0.116862 insignificant 1.000000 1 insignificant -0.0161411 0.8290740 lowCoverage 1 lowCoverage 0.84791 0.91183 -0.079048 5 0.82687 0.82417 0.0027011 5.7312e-01 8.3989e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2049e-01 2.1268e-03 weaklyHypometh 1.00000000 0.7089312 insignificant -0.0537767 0.4123894 lowCoverage 1.00000 lowCoverage 0.84791 0.859489 -0.0100726 5 0.82687 0.70837 0.11850120 1.5314e-01 0.21738 insignificant 1.0000e+00 1 insignificant 7.9256e-01 0.34370 insignificant 1.0000000 1 insignificant 0.0271238 0.717461 lowCoverage 1 lowCoverage 0.91183 0.859489 0.0713906 5 0.82417 0.70837 0.115800 1.7828e-02 9.8571e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 7.0463e-02 0.99808583 insignificant 1.00000000 1.000000 insignificant 0.080901 0.36367920 lowCoverage 1.000000 lowCoverage chr9 36771370 36772370 93438 MELK ENSG00000165304 0.89591 355 5 0.78335 215 5 0.61625 183 5 0.87964 419 5 0.79126 93 5 0.91000 326 5 0.83563 168 5 0.82368 118 5 0.81981 175 5 0.96408 94 5 0.90015 214 5 0.96515 57 5 0.639953 278 5 0.853077 44 3 0.73936 166 5 0.93333 16 0 0.74381 74 5 0.57662 492 5 0.769601 160 5 0.89376 214 5 0.82778 47 4 0.49429 105 4 0.91976 174 5 0.83750 23 3 0.5558942 96 4 0.72235 261 5 0.87017 48 4 0.89947 77 4 0.83009 227 5 0.80167 285 5 0.781466 281 5 0.92030 295 5 0.35761 223 5 0.41189 57 5 0.63500 170 5 0.25000 12 0 0.53166 123 5 0.77606 299 5 0.762667 352 5 0.77268 309 5 0.755411 340 5 0.703454 301 5 0.68227 380 5 0.91038 0.79554 0.61094 0.89551 0.81296 0.92708 0.84895 0.84025 0.83977 0.97010 0.91625 0.97433 0.650371 0.84089 0.74643 0.91542 0.73497 0.58548 0.77428 0.90593 0.79697 0.580171 0.91661 0.82515 0.653517 0.74071 0.85674 0.88525 0.82428 0.80991 0.770722 0.93726 0.35532 0.47226 0.70522 0.29726 0.56573 0.76711 0.791034 0.78524 0.763528 0.747034 0.69566 4 0.79953 0.81918 -0.0184951 5 0.79459 0.81030 -1.5717e-02 0.88168 0.2938485 insignificant 1 1.00000 insignificant 0.47796 0.8557624 insignificant 1 1 insignificant 0.0283264 0.5499420 lowCoverage 1 lowCoverage 0.79953 0.58937 0.210090 5 0.79459 0.58341 0.211180 1.2261e-06 9.9999e-01 hypermethylated 5.8388e-05 1.0000e+00 hypermethylated 6.8634e-06 1.0000e+00 hypermethylated 0.00068634 1.00000000 hypermethylated 0.323019 0.0077668 lowCoverage 0.64723 lowCoverage 0.79953 0.736623 0.0591315 5 0.79459 0.73523 0.0593582 4.9608e-02 0.994897 weaklyHypermeth 1.0000e+00 1 insignificant 1.2088e-03 0.999952 weaklyHypermeth 0.151098 1 insignificant 0.0814231 0.0153788 lowCoverage 1 lowCoverage 0.81918 0.58937 0.230958 5 0.81030 0.58341 0.2268969 2.2250e-05 9.9992e-01 hypermethylated 1.0113e-03 1.0000e+00 hypermethylated 5.9089e-04 9.9996e-01 hypermethylated 0.03193865 1.0000000 hypermethylated 0.2946924 0.0108675 lowCoverage 0.51750 lowCoverage 0.81918 0.736623 0.0764629 5 0.81030 0.73523 0.07507538 6.8290e-03 0.99760 weaklyHypermeth 4.2681e-01 1 insignificant 2.3559e-02 0.99470 weaklyHypermeth 1.0000000 1 insignificant 0.0530966 0.239087 lowCoverage 1 lowCoverage 0.58937 0.736623 -0.1501744 5 0.58341 0.73523 -0.151822 9.9272e-01 4.6556e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 9.9946e-01 0.01443489 weaklyHypometh 1.00000000 0.687376 insignificant -0.241596 0.02685009 lowCoverage 1.000000 lowCoverage chr9 38411561 38412561 93576 ALDH1B1 ENSG00000137124 0.30411 338 6 0.21366 302 6 0.21342 108 6 0.32618 327 4 0.28971 80 6 0.42756 331 6 0.28791 148 6 0.20821 101 6 0.29758 91 6 0.26419 79 3 0.25987 244 6 0.39327 95 6 0.057506 124 3 0.041667 21 3 0.17927 110 6 0.29938 80 3 0.36232 77 3 0.34427 427 5 0.098377 180 6 0.19875 365 6 0.44975 55 6 0.11111 10 0 0.36413 173 6 0.37775 126 6 0.0079365 104 5 0.12250 269 6 0.21318 73 6 0.24229 91 6 0.20103 178 6 0.14122 351 6 0.097593 291 6 0.48388 267 6 0.56357 177 6 0.74496 125 6 0.98770 120 6 0.37500 20 0 0.62529 263 6 0.15148 237 6 0.052314 459 6 0.14765 392 6 0.034344 479 5 0.061728 97 5 0.26018 371 6 0.33392 0.17478 0.24281 0.32273 0.28362 0.48589 0.33643 0.21258 0.30360 0.34110 0.28441 0.45072 0.051661 0.12150 0.18608 0.44680 0.28858 0.30713 0.12281 0.18886 0.60029 0.042463 0.49576 0.29419 0.023355 0.11434 0.19835 0.21161 0.20719 0.13891 0.070144 0.53521 0.49691 0.63219 0.98098 0.24682 0.65918 0.13899 0.032014 0.11682 0.045796 0.056617 0.18223 1 0.21086 0.20322 0.0134391 6 0.25028 0.23979 1.0493e-02 0.42356 0.6948030 insignificant 1 1.00000 insignificant 0.18812 0.8756471 insignificant 1 1 insignificant 0.0189968 0.7066931 insignificant 1 insignificant 0.21086 0.53609 -0.311673 6 0.25028 0.54920 -0.298922 9.9999e-01 4.5977e-13 hypomethylated 1.0000e+00 4.5977e-10 hypomethylated 9.9935e-01 3.5450e-07 hypomethylated 1.00000000 0.00035450 hypomethylated -0.321308 0.0416070 weaklyHypometh 1.00000 insignificant 0.21086 0.041157 0.1111259 6 0.25028 0.12894 0.1213471 1.2428e-05 0.999987 weaklyHypermeth 1.7754e-03 1 weaklyHypermeth 3.7898e-04 0.999339 weaklyHypermeth 0.094746 1 weaklyHypermeth 0.1421180 0.0222929 weaklyHypermeth 1 insignificant 0.20322 0.53609 -0.324686 6 0.23979 0.54920 -0.3094150 9.9901e-01 4.8391e-09 hypomethylated 1.0000e+00 4.8391e-06 hypomethylated 9.9748e-01 1.1882e-06 hypomethylated 1.00000000 0.0011882 hypomethylated -0.3403053 0.0336553 weaklyHypometh 1.00000 insignificant 0.20322 0.041157 0.0983728 6 0.23979 0.12894 0.11085428 7.4576e-03 0.99920 weaklyHypermeth 4.3868e-01 1 insignificant 3.0163e-02 0.99396 weaklyHypermeth 1.0000000 1 insignificant 0.1231212 0.065171 insignificant 1 insignificant 0.53609 0.041157 0.4509063 6 0.54920 0.12894 0.420269 3.1908e-07 1.0000e+00 hypermethylated 0.00010636 1.0000e+00 hypermethylated 8.9688e-07 1.00000000 hypermethylated 0.00089688 1.000000 hypermethylated 0.463426 0.00963563 weaklyHypermeth 0.602227 insignificant chr9 44806662 44807662 93693 ENSG00000204814 0.51308 112 6 0.83905 102 5 0.69717 131 8 0.47850 77 2 0.81571 67 5 0.96528 152 5 0.89874 83 6 0.86616 66 6 0.88671 123 6 0.92770 96 5 0.85701 81 6 0.87582 67 6 0.799274 102 5 0.673333 46 2 0.92690 90 3 0.81149 71 6 0.58842 69 6 0.91008 148 3 0.778467 91 5 0.74618 134 8 0.52179 54 2 0.77790 44 3 0.88049 137 12 0.75397 38 2 0.8909091 34 2 0.89309 93 6 0.85392 80 6 0.74983 89 5 0.75747 64 5 0.93839 105 6 0.918512 94 5 0.84147 135 14 0.77197 88 5 0.73925 93 5 0.96596 119 5 0.61667 60 5 0.61221 93 5 0.76447 122 6 0.823931 175 8 0.89205 219 14 0.841540 117 2 0.931554 125 5 0.98514 178 12 0.90084 0.84289 0.64099 0.88155 0.91016 0.83011 0.82081 0.88228 0.85197 0.79184 0.83325 0.81212 0.789190 0.70314 0.91364 0.80949 0.65935 0.88215 0.90619 0.70200 0.88439 0.703756 0.87470 0.86852 0.923820 0.87092 0.62171 0.82923 0.68499 0.91728 0.863228 0.76928 0.75786 0.46224 0.85080 0.63992 0.53748 0.50606 0.752758 0.77428 0.730454 0.800940 0.91550 2 0.82057 0.81903 -0.0029485 5 0.81260 0.83097 -1.8370e-02 0.93508 0.6700484 insignificant 1 1.00000 insignificant 0.87155 0.7280864 insignificant 1 1 insignificant -0.0220595 0.6292312 insignificant 1 insignificant 0.82057 0.70261 0.139422 5 0.81260 0.73350 0.079093 2.0794e-07 9.3339e-01 weaklyHypermeth 1.2996e-05 1.0000e+00 weaklyHypermeth 3.9702e-04 9.9506e-01 weaklyHypermeth 0.02530066 1.00000000 weaklyHypermeth 0.047665 0.4574772 insignificant 1.00000 insignificant 0.82057 0.831695 0.0023151 6 0.81260 0.88804 -0.0754387 9.3417e-01 0.107076 insignificant 1.0000e+00 1 insignificant 7.5913e-01 0.213316 insignificant 1.000000 1 insignificant -0.1020923 0.0314462 weaklyHypometh 1 insignificant 0.81903 0.70261 0.144920 5 0.83097 0.73350 0.0974635 9.2133e-06 9.5894e-01 weaklyHypermeth 5.1185e-04 1.0000e+00 weaklyHypermeth 1.0856e-03 9.9331e-01 weaklyHypermeth 0.04934420 1.0000000 weaklyHypermeth 0.0697241 0.2922618 insignificant 1.00000 insignificant 0.81903 0.831695 -0.0089452 5 0.83097 0.88804 -0.05706819 9.7069e-01 0.08686 insignificant 1.0000e+00 1 insignificant 7.5141e-01 0.17874 insignificant 1.0000000 1 insignificant -0.0800328 0.093395 insignificant 1 insignificant 0.70261 0.831695 -0.1673868 5 0.73350 0.88804 -0.154532 9.9999e-01 5.2352e-05 weaklyHypometh 1.00000000 4.3463e-03 weaklyHypometh 1.0000e+00 0.00254063 weaklyHypometh 1.00000000 0.211720 insignificant -0.149757 0.03987672 weaklyHypometh 1.000000 insignificant chr9 46270958 46271958 93772 ENSG00000201738 0.80420 329 5 0.71961 168 5 0.55755 142 5 0.82362 286 5 0.79895 63 5 0.81132 306 5 0.73714 81 5 0.79590 111 5 0.81486 117 5 0.84121 106 5 0.75556 183 5 0.85333 50 5 0.771722 127 5 0.777778 18 1 0.75036 102 5 0.64833 48 5 0.61001 254 5 0.72709 344 5 0.788023 139 5 0.74755 269 5 0.68174 47 4 0.55559 135 5 0.73732 252 5 0.70916 77 5 0.9651515 59 5 0.90291 164 5 0.58174 95 5 0.84660 53 4 0.65608 121 5 0.80058 198 5 0.758593 197 5 0.79023 302 5 0.36462 145 5 0.45121 133 5 0.45769 102 5 0.58884 108 5 0.66167 81 5 0.65331 223 5 0.750774 442 5 0.66476 459 5 0.768632 348 5 0.819000 357 5 0.76029 236 5 0.79870 0.68726 0.57250 0.82664 0.80447 0.80654 0.73418 0.78641 0.80687 0.84618 0.75474 0.85635 0.768432 NA 0.75446 0.67350 0.63471 0.73120 0.79382 0.74377 0.68095 0.548403 0.75482 0.75035 0.971028 0.89279 0.59281 0.83768 0.68452 0.80359 0.749677 0.79179 0.37528 0.42880 0.41052 0.57702 0.64303 0.64503 0.734615 0.65779 0.774160 0.833549 0.74428 5 0.76287 0.75588 0.0036535 5 0.75207 0.75215 -7.9383e-05 0.34860 0.3174156 insignificant 1 1.00000 insignificant 0.27360 0.4118264 insignificant 1 1 insignificant 0.0078992 0.8428484 lowCoverage 1 lowCoverage 0.76287 0.52020 0.233362 5 0.75207 0.53371 0.218353 3.9441e-13 1.0000e+00 hypermethylated 4.9301e-11 1.0000e+00 hypermethylated 1.8743e-06 1.0000e+00 hypermethylated 0.00031238 1.00000000 hypermethylated 0.227150 0.0046761 lowCoverage 0.46761 lowCoverage 0.76287 0.764387 0.0120531 5 0.75207 0.74347 0.0085992 4.4902e-01 0.751503 insignificant 1.0000e+00 1 insignificant 2.4235e-01 0.913901 insignificant 1.000000 1 insignificant 0.0040155 0.8974308 lowCoverage 1 lowCoverage 0.75588 0.52020 0.233595 5 0.75215 0.53371 0.2184322 6.7560e-09 1.0000e+00 hypermethylated 7.5066e-07 1.0000e+00 hypermethylated 5.7341e-06 1.0000e+00 hypermethylated 0.00095569 1.0000000 hypermethylated 0.2192513 0.0048889 lowCoverage 0.30555 lowCoverage 0.75588 0.764387 0.0093253 5 0.75215 0.74347 0.00867857 4.6137e-01 0.58725 insignificant 1.0000e+00 1 insignificant 6.5158e-01 0.52246 insignificant 1.0000000 1 insignificant -0.0038837 0.929645 lowCoverage 1 lowCoverage 0.52020 0.764387 -0.2177236 5 0.53371 0.74347 -0.209754 1.0000e+00 1.4253e-05 hypomethylated 1.00000000 2.0362e-03 hypomethylated 9.9995e-01 0.00093426 hypomethylated 1.00000000 0.133466 insignificant -0.223135 0.00485283 weaklyHypometh 0.402077 insignificant chr9 67370070 67371070 93835 ENSG00000199432 0.79471 346 5 0.65377 172 5 0.60237 137 5 0.82474 336 5 0.88881 61 5 0.81559 370 5 0.80916 115 5 0.77951 164 5 0.84416 127 5 0.87682 88 5 0.79680 222 5 0.75103 62 5 0.754242 88 5 0.760000 25 1 0.82054 85 5 0.43844 45 2 0.64002 274 5 0.77539 274 5 0.735557 174 5 0.76430 277 5 0.54167 46 4 0.70462 194 5 0.76689 278 5 0.75531 77 5 0.7955556 69 5 0.87639 189 5 0.72053 139 5 0.88864 46 5 0.69780 139 5 0.78839 179 5 0.788020 187 5 0.77127 324 5 0.51538 187 5 0.55109 149 5 0.54722 113 5 0.48156 125 5 0.74138 79 5 0.54017 208 5 0.811886 354 5 0.69580 365 5 0.743315 393 5 0.778610 432 5 0.78935 269 5 0.80097 0.65696 0.61760 0.80300 0.85808 0.81954 0.75618 0.79311 0.83432 0.85611 0.80656 0.78741 0.780924 NA 0.80430 0.53541 0.64514 0.76018 0.75872 0.76685 0.60219 0.665436 0.79549 0.77656 0.794536 0.87932 0.72806 0.86121 0.74766 0.81333 0.785710 0.76710 0.52770 0.52578 0.54918 0.50299 0.70199 0.53786 0.815835 0.71009 0.731307 0.796812 0.79371 5 0.77252 0.77236 -0.0021315 5 0.76506 0.76741 -2.3543e-03 0.50571 0.4445286 insignificant 1 1.00000 insignificant 0.50791 0.4287845 insignificant 1 1 insignificant -0.0016255 0.9632986 lowCoverage 1 lowCoverage 0.77252 0.53542 0.234595 5 0.76506 0.53136 0.233697 2.1079e-17 1.0000e+00 hypermethylated 5.2698e-15 1.0000e+00 hypermethylated 2.3098e-06 9.9999e-01 hypermethylated 0.00032997 1.00000000 hypermethylated 0.193497 0.0015757 lowCoverage 0.22330 lowCoverage 0.77252 0.780474 -0.0045945 5 0.76506 0.76773 -0.0026711 7.4695e-01 0.523510 insignificant 1.0000e+00 1 insignificant 8.3881e-01 0.586212 insignificant 1.000000 1 insignificant -0.0074938 0.8119339 lowCoverage 1 lowCoverage 0.77236 0.53542 0.238171 5 0.76741 0.53136 0.2360515 1.5888e-13 1.0000e+00 hypermethylated 3.1775e-11 1.0000e+00 hypermethylated 4.8245e-05 9.9999e-01 hypermethylated 0.00482450 1.0000000 hypermethylated 0.1951230 0.0015799 lowCoverage 0.15450 lowCoverage 0.77236 0.780474 -0.0022204 5 0.76741 0.76773 -0.00031686 6.3053e-01 0.48109 insignificant 1.0000e+00 1 insignificant 6.7971e-01 0.57378 insignificant 1.0000000 1 insignificant -0.0058683 0.861298 lowCoverage 1 lowCoverage 0.53542 0.780474 -0.2391433 5 0.53136 0.76773 -0.236368 1.0000e+00 9.5454e-09 hypomethylated 1.00000000 4.7727e-06 hypomethylated 9.9996e-01 0.00042965 hypomethylated 1.00000000 0.085931 hypomethylated -0.200991 0.00170454 weaklyHypometh 0.213068 insignificant chr9 81195899 81196899 94549 CHCHD9 ENSG00000186940 0.89073 379 8 0.69102 228 8 0.83240 191 6 0.89779 327 8 0.92672 98 6 0.86222 580 8 0.91842 113 8 0.93985 167 8 0.80590 156 6 0.83948 178 7 0.91773 246 8 0.77366 89 6 0.76399 227 6 0.88480 71 6 0.84364 173 8 0.77737 37 4 0.60452 84 6 0.80680 449 8 0.78298 194 8 0.88470 421 8 0.79016 74 8 0.69415 214 8 0.91407 198 8 0.79449 137 6 0.93577 164 8 0.83045 254 8 0.84627 188 8 0.93481 65 5 0.71163 179 7 0.75021 281 8 0.83520 311 8 0.80233 489 8 0.75677 262 8 0.80781 178 8 0.76984 106 6 0.92222 67 6 0.78402 137 8 0.68873 338 8 0.76865 443 7 0.87512 344 8 0.87089 414 8 0.83381 344 8 0.83700 395 8 0.91868 0.79129 0.86681 0.92420 0.87782 0.91113 0.91165 0.91383 0.90159 0.91860 0.92300 0.85194 0.92205 0.90515 0.89875 0.82243 0.80397 0.87227 0.88411 0.92948 0.89273 0.82693 0.92589 0.91257 0.94850 0.91229 0.89669 0.90051 0.89409 0.90631 0.93253 0.89531 0.83481 0.79010 0.89311 0.89306 0.84329 0.73060 0.82729 0.91632 0.89178 0.89222 0.87575 6 0.87863 0.87015 -0.0084789 8 0.72057 0.79953 -0.078952 0.89410 0.61768 insignificant 1 1 insignificant 0.75114 0.30289 insignificant 1 1 insignificant 0.012273 0.68515 insignificant 1 insignificant 0.87863 0.73965 0.1137990 8 0.72057 0.69744 0.023132 1.9600e-05 0.84345 weaklyHypermeth 1.7818e-03 1 weaklyHypermeth 2.2432e-01 0.78184 insignificant 1.0000000 1 insignificant 0.044002 0.260821 insignificant 1 insignificant 0.87989 0.87100 0.0221465 8 0.84390 0.83174 0.012162 0.018838 0.385676 weaklyHypermeth 1 1 insignificant 0.043877 0.633312 weaklyHypermeth 1 1 insignificant -0.0048590 0.85933 insignificant 1 insignificant 0.86883 0.73989 0.12086750 8 0.74502 0.72495 0.020076 2.2602e-04 0.75914 weaklyHypermeth 2.0548e-02 1 weaklyHypermeth 3.4906e-02 0.69431 weaklyHypermeth 1.0000000 1 insignificant 0.031729 0.434126 insignificant 1 insignificant 0.87068 0.87113 2.9730e-02 8 0.77169 0.85043 -0.078738 0.021507 0.336713 weaklyHypermeth 1 1 insignificant 0.055375 0.54899 insignificant 1 1 insignificant -0.017132 0.57728 insignificant 1 insignificant 0.74033 0.87113 -0.089261 8 0.77494 0.85043 -0.0754974 0.99927 0.02444974 weaklyHypometh 1 1.000000 insignificant 0.94099 0.3161993 insignificant 1 1.00000 insignificant -0.048861 0.220233 insignificant 1 insignificant chr9 81400602 81401602 94586 TLE4 ENSG00000106829 0.70909 53 5 0.65889 95 5 0.56944 37 4 0.70909 55 5 0.66429 51 6 0.75000 27 1 0.51224 43 5 0.78148 91 5 0.55000 56 5 0.66667 45 4 0.71688 133 5 0.37143 44 4 0.75649 58 6 0.50000 36 5 0.65909 58 5 0.66667 11 0 NA 0 0 0.77245 30 3 0.79667 43 4 0.85714 22 0 0.61667 28 4 1.00000 15 0 0.66100 30 3 0.59763 50 4 0.91241 40 4 0.72269 81 5 0.68041 93 5 0.61905 13 0 0.71667 36 5 0.62917 78 6 0.56071 68 4 0.74802 40 4 0.64469 58 5 0.77687 52 5 0.42780 115 7 0.80000 9 0 0.57589 139 5 0.68398 51 4 0.82143 41 5 0.63095 28 1 0.70741 36 5 0.80000 12 0 0.75817 41 5 0.66248 0.57837 0.55822 0.68859 0.50152 0.67021 0.28875 0.71879 0.36383 0.70449 0.58117 0.25532 0.73598 0.34468 0.56383 0.78723 NA 0.81155 0.77092 0.77660 0.57447 1.00000 0.65603 0.42526 0.87209 0.57447 0.52401 0.52482 0.68085 0.52482 0.49848 0.61052 0.53568 0.76444 0.25807 0.78723 0.59175 0.54610 0.77872 0.54078 0.75461 0.62402 0.70028 0 0.62715 0.59790 0.0203243 5 0.69319 0.64509 0.048109 0.62834 0.91275 insignificant 1 1 insignificant 0.92020 0.72234 insignificant 1 1 insignificant -0.038631 0.41769 lowCoverage 1 lowCoverage 0.62577 0.54717 0.0801664 5 0.66073 0.59931 0.061424 8.5474e-04 0.96502 weaklyHypermeth 5.6983e-02 1 weaklyHypermeth 1.1877e-01 0.86199 insignificant 1.0000000 1 insignificant 0.015198 0.814554 lowCoverage 1 lowCoverage 0.62627 0.77848 -0.0867897 1 0.68057 0.70807 -0.027496 0.968345 0.008454 lowCoverage 1 1 lowCoverage 0.868773 0.047468 lowCoverage 1 1 lowCoverage -0.0768533 0.11131 lowCoverage 1 lowCoverage 0.59717 0.54717 0.05618143 5 0.65656 0.59931 0.057251 6.7301e-03 0.95883 weaklyHypermeth 2.8042e-01 1 insignificant 7.7450e-02 0.88723 insignificant 1.0000000 1 insignificant 0.053829 0.445503 lowCoverage 1 lowCoverage 0.59683 0.77848 -1.0478e-01 1 0.62177 0.70807 -0.086297 0.996242 0.018024 lowCoverage 1 1 lowCoverage 0.917226 0.22053 lowCoverage 1 1 lowCoverage -0.038222 0.46691 lowCoverage 1 lowCoverage 0.54717 0.78205 -0.175172 1 0.59931 0.76752 -0.1682046 0.99790 0.00019593 lowCoverage 1 0.058561 lowCoverage 0.94704 0.0100918 lowCoverage 1 0.77629 lowCoverage -0.092052 0.199144 lowCoverage 1 lowCoverage chr9 82368876 82369876 94734 ENSG00000211189,ENSG00000211192,ENSG00000211196,ENSG00000211201,ENSG00000218149 0.95825 455 5 0.91488 251 7 0.98454 118 4 0.96673 446 7 0.88228 60 6 0.87360 440 7 0.86458 71 6 0.96865 119 7 0.86274 132 6 0.90359 88 6 0.90737 277 7 0.80202 44 6 0.94951 141 6 0.83824 45 4 0.82511 103 6 1.00000 12 0 0.97222 26 3 0.91338 455 5 0.93005 91 5 0.94917 318 5 0.81837 58 5 0.76311 71 4 0.98252 166 5 0.86553 90 5 0.97500 65 5 0.94917 302 7 0.86579 91 5 0.98701 62 6 0.89992 166 7 0.85513 315 7 0.74004 450 7 0.82251 364 7 0.75926 220 7 0.66004 84 7 0.49500 114 6 0.69286 28 3 0.77362 185 7 0.90604 304 7 0.95871 569 7 0.96057 422 7 0.80801 648 7 0.96441 250 4 0.94721 566 7 0.94647 0.92067 0.97934 0.95270 0.86254 0.95590 0.97998 0.98955 0.88357 0.95717 0.86323 0.78163 0.95298 0.93926 0.93680 0.99957 0.97274 0.89692 0.97204 0.92939 0.81846 0.89730 0.98107 0.96747 0.94589 0.93633 0.90572 0.99941 0.93792 0.95322 0.95254 0.92510 0.83518 0.69506 0.21161 0.68596 0.79915 0.89945 0.93316 0.94303 0.92924 0.95889 0.93428 4 0.93091 0.94404 -0.0114708 7 0.89246 0.87465 0.017810 0.96024 0.39746 insignificant 1 1 insignificant 0.94022 0.84306 insignificant 1 1 insignificant 0.036336 0.20076 insignificant 1 insignificant 0.93088 0.80000 0.1282694 7 0.88051 0.68415 0.196364 3.3575e-09 0.99997 weaklyHypermeth 6.7149e-07 1 weaklyHypermeth 1.1977e-05 0.99972 weaklyHypermeth 0.0039923 1 weaklyHypermeth 0.198876 0.015235 weaklyHypermeth 1 insignificant 0.93088 0.94501 -0.0162783 7 0.88051 0.84812 0.032390 0.968682 0.181267 insignificant 1 1 insignificant 0.652400 0.860744 insignificant 1 1 insignificant -0.0144382 0.67485 insignificant 1 insignificant 0.94401 0.80000 0.14148178 7 0.86072 0.68415 0.176576 3.2603e-07 0.99998 weaklyHypermeth 6.5205e-05 1 weaklyHypermeth 1.4684e-05 0.99994 weaklyHypermeth 0.0036709 1 weaklyHypermeth 0.162540 0.032375 weaklyHypermeth 1 insignificant 0.94401 0.94501 -3.7599e-03 7 0.86072 0.84812 0.012601 0.828260 0.816445 insignificant 1 1 insignificant 0.681263 0.97881 insignificant 1 1 insignificant -0.050774 0.21969 insignificant 1 insignificant 0.80000 0.94501 -0.146104 7 0.68415 0.84812 -0.1639743 1.00000 0.00011767 weaklyHypometh 1 0.058561 weaklyHypometh 0.99999 0.0006758 weaklyHypometh 1 0.13516 insignificant -0.213314 0.010867 weaklyHypometh 1 insignificant chr9 82369110 82370110 94735 ENSG00000211189,ENSG00000211192,ENSG00000211196,ENSG00000211201,ENSG00000218149 0.94155 449 5 0.93095 221 5 0.97836 114 4 0.95343 434 5 0.89150 40 4 0.84200 430 5 0.81944 55 4 0.99524 101 5 0.86844 61 4 0.97614 70 4 0.87032 235 5 0.78636 32 4 0.96197 92 4 1.00000 11 2 0.78070 80 4 1.00000 10 0 0.97222 26 3 0.91338 455 5 0.90207 89 5 0.94069 317 5 0.81238 51 5 0.76311 71 4 0.97553 162 5 0.82711 84 5 0.96667 63 5 0.94313 274 5 0.87878 85 5 1.00000 39 4 0.96378 143 5 0.82803 295 5 0.79122 403 5 0.76335 346 5 0.75831 157 5 0.61338 74 5 0.33333 64 4 0.57000 12 1 0.83137 134 5 0.90503 282 5 0.94220 539 5 0.94743 400 5 0.77179 636 5 0.96441 250 4 0.94427 500 5 0.94430 0.92286 0.97850 0.95078 0.86440 0.95411 0.97917 0.99363 0.88402 0.96520 0.85768 0.77953 0.95443 0.94753 0.93706 0.99956 0.97478 0.89588 0.97090 0.92714 0.81335 0.89683 0.98030 0.96615 0.94369 0.93423 0.91316 1.00000 0.95511 0.95470 0.95355 0.92207 0.83847 0.69080 0.18100 0.67323 0.80849 0.89660 0.93045 0.94072 0.92750 0.95807 0.93387 4 0.93616 0.94591 -0.0088232 5 0.89463 0.86227 0.032364 0.93404 0.75675 insignificant 1 1 insignificant 0.85289 0.96933 insignificant 1 1 insignificant 0.040148 0.19649 lowCoverage 1 lowCoverage 0.93613 0.79530 0.1376423 5 0.87958 0.64641 0.233171 5.4963e-09 0.99986 weaklyHypermeth 9.1605e-07 1 weaklyHypermeth 1.9685e-05 0.99740 weaklyHypermeth 0.0049212 1 weaklyHypermeth 0.247667 0.032306 lowCoverage 1 lowCoverage 0.93613 0.94366 -0.0085535 5 0.87958 0.81352 0.066057 0.871954 0.603095 insignificant 1 1 insignificant 0.452598 0.974385 insignificant 1 1 insignificant 0.0022170 0.95662 lowCoverage 1 lowCoverage 0.94588 0.79530 0.14579510 5 0.84259 0.64641 0.196183 3.0825e-06 0.99973 weaklyHypermeth 4.4036e-04 1 weaklyHypermeth 3.7492e-05 0.99919 weaklyHypermeth 0.0062487 1 weaklyHypermeth 0.207519 0.058081 lowCoverage 1 lowCoverage 0.94588 0.94366 5.8877e-05 5 0.84259 0.81352 0.029070 0.716190 0.893853 insignificant 1 1 insignificant 0.624721 0.98849 insignificant 1 1 insignificant -0.037931 0.41303 lowCoverage 1 lowCoverage 0.79530 0.94366 -0.144608 5 0.64641 0.81352 -0.1671135 0.99994 0.00082747 weaklyHypometh 1 0.091941 weaklyHypometh 0.99975 0.0016491 weaklyHypometh 1 0.27485 insignificant -0.245450 0.033570 lowCoverage 1 lowCoverage chr9 83327651 83328651 94835 ENSG00000217894 0.72083 95 4 0.58362 122 8 0.54127 77 7 0.68040 118 8 0.57824 55 3 0.59536 136 8 0.62459 60 7 0.59731 87 7 0.68500 40 5 0.73438 34 2 0.75375 236 8 0.25000 32 2 0.75208 67 7 0.79146 62 5 0.63075 50 4 0.40476 14 0 0.61111 8 0 0.60995 122 7 0.56864 86 4 0.38095 44 4 0.69643 32 3 0.80000 5 0 0.73146 83 5 0.60202 57 6 0.58231 57 5 0.48651 126 9 0.80699 52 5 0.50694 30 2 0.56623 97 7 0.61322 178 8 0.76098 110 9 0.61377 101 8 0.61855 83 6 0.61776 56 7 0.68745 233 8 0.70000 10 2 0.43067 113 6 0.72507 128 8 0.59058 173 8 0.70333 169 6 0.82267 198 6 0.39286 24 2 0.56529 195 7 0.68463 0.57972 0.51511 0.64103 0.56797 0.66921 0.58125 0.60113 0.76861 0.69048 0.67231 0.36147 0.71645 0.77360 0.63190 0.46537 0.59066 0.70754 0.67048 0.58627 0.59369 0.64856 0.63348 0.54046 0.60767 0.69722 0.76325 0.47908 0.66468 0.65375 0.72398 0.68194 0.61928 0.51788 0.69743 0.66328 0.52470 0.66940 0.63759 0.72231 0.78953 0.47681 0.67206 0 0.64401 0.67565 -0.0121763 8 0.59688 0.62700 -0.030122 0.93366 0.77293 insignificant 1 1 insignificant 0.99293 0.47913 insignificant 1 1 insignificant -0.042515 0.33888 insignificant 1 insignificant 0.64401 0.72231 -0.0052311 8 0.59688 0.61558 -0.018699 8.7126e-01 0.69210 insignificant 1.0000e+00 1 insignificant 8.5821e-01 0.87322 insignificant 1.0000000 1 insignificant -0.025194 0.644887 insignificant 1 insignificant 0.64263 0.82345 -0.0269612 6 0.56587 0.61503 -0.049168 0.583923 0.040170 weaklyHypometh 1 1 insignificant 0.859033 0.444076 insignificant 1 1 insignificant -0.0102244 0.90030 insignificant 1 insignificant 0.67565 0.72231 -0.00075797 8 0.62700 0.61558 0.011423 9.4944e-01 0.81390 insignificant 1.0000e+00 1 insignificant 6.2167e-01 0.95810 insignificant 1.0000000 1 insignificant 0.017321 0.754452 insignificant 1 insignificant 0.67318 0.82345 -1.7785e-02 6 0.59831 0.61503 -0.016729 0.671029 0.444140 insignificant 1 1 insignificant 0.673420 0.83766 insignificant 1 1 insignificant 0.032291 0.69614 insignificant 1 insignificant 0.72303 0.82345 -0.028255 6 0.62447 0.61503 0.0094312 0.71482 0.45425531 insignificant 1 1.000000 insignificant 0.93418 0.7567037 insignificant 1 1.00000 insignificant 0.014969 0.863970 insignificant 1 insignificant chr9 88888488 88889488 95210 ENSG00000197698 0.95398 176 5 0.90824 109 3 0.860399 35 3 0.92717 153 5 1.000000 8 0 0.89182 136 4 0.40000 5 1 0.87027 73 3 0.787398 27 3 0.94583 36 3 0.82319 63 3 0.933333 7 1 0.98611 73 3 NA 0 0 1.000000 25 3 1.000000 1 0 0.666667 18 1 0.87535 167 4 0.72271 41 4 0.933960 111 4 0.86667 30 3 0.700000 41 3 0.89875 88 4 0.87778 22 3 0.90278 48 3 0.987805 129 4 0.917929 50 3 0.937500 7 0 0.912631 80 3 0.95787 140 4 0.92988 223 4 0.90785 185 5 0.932503 74 3 1.000000 46 3 1.0000000 145 4 0.37172 95 3 0.772487 21 3 0.213378 128 5 0.922902 148 5 0.89384 115 5 0.81416 118 5 0.760080 123 4 0.85115 136 5 0.94154 0.914851 0.875103 0.907058 1.000000 0.80768 0.558349 0.90282 0.756365 0.94153 0.847125 0.864516 0.9932796 NA 1.000000 0.964801 0.666667 0.877161 0.924849 0.921362 0.832258 0.6483871 0.897692 0.854839 0.8454301 0.950433 0.897727 0.830645 0.918022 0.926324 0.911367 0.90168 0.943880 1.0000000 1.0000000 0.199241 0.832565 0.1234895 0.8552435 0.768501 0.72177 0.776769 0.829022 0 0.89532 0.89914 -0.0055003 3 0.91760 0.92889 -0.0112981 9.3908e-01 0.4179162 lowCoverage 1.0000000 1.00000 lowCoverage 0.8656258 2.9651e-01 lowCoverage 1 1.0000000 lowCoverage -0.0320798 0.420827 lowCoverage 1 lowCoverage 0.89470 0.707269 0.2149247 4 0.84800 0.761794 0.0862036 5.6199e-04 9.9659e-01 lowCoverage 1.3707e-02 1.0000e+00 lowCoverage 2.5468e-01 0.93745861 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.152693 3.3052e-01 lowCoverage 1.0000e+00 lowCoverage 0.89532 0.848200 0.0750717 4 0.91760 0.85998 0.057613 2.0558e-03 9.9701e-01 lowCoverage 2.2843e-01 1.00000000 lowCoverage 5.6097e-03 9.9601e-01 lowCoverage 9.6099e-01 1.0000000 lowCoverage 0.0192816 6.6834e-01 lowCoverage 1.0000000 lowCoverage 0.89914 0.706693 0.203892 3 0.92889 0.714152 0.214742 1.1380e-03 9.9997e-01 lowCoverage 2.6465e-02 1.0000e+00 lowCoverage 1.2080e-01 0.9415998 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.184773 2.4432e-01 lowCoverage 1.0000e+00 lowCoverage 0.89933 0.848437 0.0844663 3 0.94075 0.88332 0.0574258 4.0244e-03 0.9999739 lowCoverage 4.0244e-01 1.00000 lowCoverage 1.0526e-02 0.999986 lowCoverage 1.00000000 1 lowCoverage 0.05136142 0.1830599 lowCoverage 1.00000 lowCoverage 0.706693 0.848200 -0.150304 5 0.714152 0.85998 -0.145831 0.98724611 6.1789e-02 insignificant 1.00000 1.0000e+00 insignificant 0.661813 5.3619e-01 insignificant 1 1.0000e+00 insignificant -0.133411 3.8830e-01 lowCoverage 1.0000000 lowCoverage chr9 89985167 89986167 95235 ENSG00000204429 0.93139 289 12 0.76265 292 12 0.793097 330 12 0.94192 320 12 0.680855 261 13 0.91961 457 13 0.69152 239 14 0.92754 305 12 0.676311 371 14 0.75504 390 14 0.80861 332 12 0.680888 239 10 0.76104 434 14 0.68365 290 14 0.788339 481 14 0.584171 268 10 0.697586 75 8 0.82481 340 12 0.87114 327 8 0.839345 234 12 0.70110 55 4 0.936982 186 12 0.93228 155 8 0.79087 101 12 0.83372 132 8 0.971826 334 12 0.824069 195 12 0.735853 216 14 0.817465 271 8 0.94900 381 12 0.94748 433 12 0.92936 351 12 0.729237 247 14 0.756761 150 8 0.8871709 221 9 1.00000 54 2 0.730102 244 14 0.865208 301 12 0.959492 338 8 0.91630 207 8 0.90978 255 12 0.973726 274 12 0.96364 354 12 0.93923 0.822784 0.912619 0.936546 0.738194 0.93226 0.785178 0.91538 0.746123 0.84056 0.947659 0.780889 0.8755418 0.76855 0.894042 0.618062 0.668465 0.898563 0.947865 0.928336 0.899916 0.9338563 0.909665 0.911251 0.9521325 0.966020 0.882596 0.841279 0.937128 0.954352 0.946921 0.92908 0.823741 0.8473812 0.8979038 1.000000 0.815117 0.9135908 0.9475183 0.915962 0.93418 0.974356 0.951697 8 0.81591 0.90320 -0.0496882 12 0.75176 0.80508 -0.0533271 9.9794e-01 0.0010814 weaklyHypometh 1.0000000 0.75976 insignificant 0.9999562 6.6691e-06 weaklyHypometh 1 0.0066691 weaklyHypometh -0.0831926 0.025547 weaklyHypometh 1 insignificant 0.81591 0.847039 -0.0091098 12 0.75176 0.756094 -0.0043386 6.2555e-01 3.1784e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9893e-01 0.06939631 insignificant 1.0000e+00 1.00000 insignificant -0.047105 3.7294e-01 insignificant 1.0000e+00 insignificant 0.84001 0.951681 -0.0924645 12 0.80958 0.93273 -0.123144 1.0000e+00 3.7519e-07 weaklyHypometh 1.0000e+00 0.00037519 weaklyHypometh 1.0000e+00 1.6121e-06 weaklyHypometh 1.0000e+00 0.0016121 weaklyHypometh -0.1636131 2.9662e-06 weaklyHypometh 0.0014831 weaklyHypometh 0.90320 0.847039 0.043745 12 0.80508 0.756094 0.048989 4.9792e-03 6.5379e-01 weaklyHypermeth 1.0824e-01 1.0000e+00 insignificant 3.2369e-01 0.7354918 insignificant 1.0000e+00 1.00000 insignificant 0.036088 5.0294e-01 insignificant 1.0000e+00 insignificant 0.91483 0.951681 -0.0300923 12 0.86109 0.93273 -0.0716320 9.8977e-01 0.0278541 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.6705e-01 0.138511 insignificant 1.00000000 1 insignificant -0.08042046 0.0162425 weaklyHypometh 1.00000 insignificant 0.861925 0.951681 -0.082055 12 0.814255 0.93273 -0.118472 0.99752600 2.3655e-04 weaklyHypometh 1.00000 1.0752e-02 weaklyHypometh 0.993719 1.6073e-01 insignificant 1 1.0000e+00 insignificant -0.116508 4.6128e-02 weaklyHypometh 1.0000000 insignificant chr9 91482354 91483354 95246 GADD45G ENSG00000130222 0.21253 145 5 0.21815 225 5 0.346380 154 5 0.15166 133 4 0.040476 125 5 0.26779 263 5 0.29011 187 5 0.24560 172 5 0.239382 157 5 0.14635 155 4 0.19423 258 5 0.430700 87 5 0.22331 143 4 0.36364 22 2 0.146434 116 4 0.385725 92 2 0.206211 90 4 0.24932 160 3 0.18611 132 5 0.180101 194 5 0.20000 55 3 0.105519 48 2 0.21175 145 5 0.17437 122 5 0.20667 32 3 0.214263 274 5 0.181438 85 5 0.133333 50 4 0.138129 164 5 0.22090 290 5 0.16043 363 5 0.16736 243 5 0.419328 181 5 0.332843 129 5 0.3333333 33 3 0.41176 38 2 0.718635 87 5 0.467898 221 5 0.054602 208 5 0.32178 153 5 0.17456 118 5 0.331057 98 4 0.20049 158 5 0.21761 0.248786 0.360622 0.186644 0.042762 0.29177 0.326667 0.29084 0.268822 0.18344 0.200381 0.436829 0.2211654 0.36260 0.178083 0.476664 0.266874 0.317595 0.232333 0.179737 0.262000 0.1056226 0.248081 0.211515 0.2728000 0.246438 0.213158 0.165333 0.164680 0.241755 0.185998 0.19852 0.402927 0.3623123 0.2783007 0.418972 0.739946 0.3972526 0.0517583 0.313574 0.19639 0.356670 0.198605 3 0.24817 0.20524 0.0512951 5 0.23311 0.18011 0.0529945 8.0639e-04 0.9999069 weaklyHypermeth 0.4031972 1.00000 insignificant 0.0188525 9.9895e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0600310 0.015794 lowCoverage 1 lowCoverage 0.24817 0.403483 -0.1313631 5 0.23311 0.442949 -0.2098426 8.8875e-03 1.3089e-14 weaklyHypometh 1.8910e-01 6.5446e-12 weaklyHypometh 6.7881e-01 0.00075531 weaklyHypometh 1.0000e+00 0.37765 insignificant -0.211089 1.3252e-02 lowCoverage 4.9081e-01 lowCoverage 0.24817 0.255782 0.0409769 5 0.23311 0.20147 0.031641 9.5135e-02 8.3297e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.7370e-01 6.9402e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0197125 7.3479e-01 lowCoverage 1.0000000 lowCoverage 0.20524 0.403483 -0.184912 5 0.18011 0.442949 -0.262837 1.7533e-01 3.0766e-11 weaklyHypometh 1.0000e+00 1.5383e-08 weaklyHypometh 8.9213e-01 0.0012264 weaklyHypometh 1.0000e+00 0.61321 insignificant -0.271120 5.1150e-03 lowCoverage 1.8635e-01 lowCoverage 0.20524 0.255782 -0.0153715 5 0.18011 0.20147 -0.0213538 6.6925e-01 0.0604092 insignificant 1.0000e+00 1.00000 insignificant 7.2495e-01 0.082643 insignificant 1.00000000 1 insignificant -0.04031851 0.4804402 lowCoverage 1.00000 lowCoverage 0.403483 0.255782 0.171251 5 0.442949 0.20147 0.241483 0.00005996 6.4401e-01 weaklyHypermeth 0.02998 1.0000e+00 weaklyHypermeth 0.017937 8.7198e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.230802 1.5638e-02 lowCoverage 0.5264641 lowCoverage chr9 92777639 92778639 95251 SYK ENSG00000165025 0.93807 191 8 0.78517 150 9 0.895602 112 6 0.96090 143 8 0.769115 107 4 0.91080 195 9 0.87489 100 6 0.87239 95 7 0.874127 87 6 0.93126 95 6 0.90266 224 10 0.944444 58 6 0.87446 87 5 1.00000 2 0 0.953195 104 6 0.972222 31 3 0.815033 50 4 0.86546 153 7 0.96782 180 7 0.957229 130 8 0.89583 82 5 0.953175 47 4 0.60818 90 5 0.92747 64 3 0.89568 82 6 0.895105 150 9 0.909722 59 6 0.880519 65 4 0.925301 123 8 0.93791 164 9 0.89991 266 10 0.89676 224 9 0.543451 148 7 0.424563 182 8 0.8161654 240 7 0.25017 131 8 0.634192 95 8 0.345743 257 9 0.903154 194 6 0.85687 196 8 0.86361 192 7 0.812486 137 4 0.88631 185 8 0.91518 0.786727 0.865455 0.983200 0.993942 0.88595 0.809437 0.87127 0.784399 0.89878 0.868132 0.912548 0.7834185 NA 0.955773 0.960271 0.828032 0.728380 0.960491 0.926613 0.885417 0.9387087 0.785649 0.978359 0.9301446 0.935228 0.869186 0.946013 0.898526 0.936467 0.888756 0.97081 0.511916 0.3527867 0.7661004 0.304568 0.669220 0.2503519 0.8789937 0.922242 0.93183 0.852107 0.849548 2 0.89878 0.91873 -0.0206268 7 0.90772 0.92264 -0.0149272 8.9691e-01 0.1922567 insignificant 1.0000000 1.00000 insignificant 0.9168906 2.7558e-01 insignificant 1 1.0000000 insignificant 0.0177798 0.554665 insignificant 1 insignificant 0.89873 0.464387 0.4337186 7 0.89849 0.514272 0.3842153 1.6458e-31 1.0000e+00 hypermethylated 5.4860e-29 1.0000e+00 hypermethylated 1.0195e-12 1.00000000 hypermethylated 3.3984e-10 1.00000 hypermethylated 0.400863 4.6059e-03 weaklyHypermeth 2.0026e-01 insignificant 0.89873 0.880531 0.0096715 6 0.89849 0.86711 0.031380 3.5297e-02 8.8540e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 7.7015e-02 9.5751e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0387566 8.8353e-02 insignificant 1.0000000 insignificant 0.91867 0.464387 0.464172 8 0.91491 0.514272 0.400635 1.3381e-24 1.0000e+00 hypermethylated 4.4604e-22 1.0000e+00 hypermethylated 1.7671e-10 1.0000000 hypermethylated 5.8904e-08 1.00000 hypermethylated 0.383083 4.8343e-03 weaklyHypermeth 1.8593e-01 insignificant 0.91867 0.880531 0.0312096 6 0.91491 0.86711 0.0478002 2.6072e-02 0.9339297 weaklyHypermeth 1.0000e+00 1.00000 insignificant 3.1583e-02 0.983952 weaklyHypermeth 1.00000000 1 insignificant 0.02097675 0.4973794 insignificant 1.00000 insignificant 0.464387 0.880531 -0.448550 7 0.514272 0.86711 -0.352835 0.99999997 1.6560e-10 hypomethylated 1.00000 3.3121e-08 hypomethylated 1.000000 1.8488e-06 hypomethylated 1 3.6975e-04 hypomethylated -0.362106 7.0811e-03 weaklyHypometh 0.3325137 insignificant chr9 93937436 93938436 95268 ENSG00000217311 0.78228 251 5 0.86113 190 5 0.746582 94 5 0.86144 238 5 0.825000 31 3 0.82658 272 5 0.50273 42 4 0.85938 183 5 0.703346 113 5 0.91089 131 5 0.85405 174 5 0.750000 20 0 0.83779 244 5 0.77857 62 5 0.911111 66 5 0.850000 16 0 0.470370 28 3 0.78939 326 5 0.85257 139 5 0.841295 167 5 0.89667 52 3 0.675737 112 5 0.81877 110 5 0.89033 92 5 0.87416 109 5 0.870523 331 5 0.761505 101 5 0.780000 26 4 0.782169 182 5 0.89455 332 5 0.90191 413 5 0.83511 244 5 0.619780 160 5 0.647097 102 5 0.6666667 47 3 0.58333 18 0 0.830107 69 5 0.661137 294 5 0.715956 113 5 0.83755 246 5 0.83178 189 5 0.922036 92 5 0.90506 208 5 0.81402 0.873935 0.762797 0.892303 0.844572 0.84956 0.475718 0.89722 0.729239 0.94344 0.869623 0.699013 0.8591403 0.84152 0.885599 0.878289 0.524573 0.829660 0.881075 0.876937 0.901316 0.7493242 0.794524 0.920462 0.8646920 0.898435 0.766992 0.773904 0.794500 0.908604 0.907884 0.87062 0.679208 0.7720147 0.6525065 0.670504 0.813693 0.6728723 0.7316312 0.854649 0.84181 0.911269 0.912552 3 0.83710 0.85789 -0.0231207 5 0.82150 0.84745 -0.0259460 9.5800e-01 0.1199596 insignificant 1.0000000 1.00000 insignificant 0.9181551 2.0175e-01 insignificant 1 1.0000000 insignificant -0.0410600 0.224147 lowCoverage 1 lowCoverage 0.83710 0.705797 0.1273739 5 0.82150 0.689306 0.1321940 5.3905e-07 8.4443e-01 weaklyHypermeth 2.0733e-05 1.0000e+00 weaklyHypermeth 9.1304e-03 0.53117316 weaklyHypermeth 2.7668e-01 1.00000 insignificant 0.122706 1.6234e-02 lowCoverage 5.7979e-01 lowCoverage 0.83710 0.856132 -0.0167282 5 0.82150 0.84492 -0.023424 6.4417e-01 1.9800e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.4134e-01 3.8886e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0517497 2.7814e-01 lowCoverage 1.0000000 lowCoverage 0.85789 0.705797 0.150938 5 0.84745 0.689306 0.158140 1.4649e-05 5.7998e-01 weaklyHypermeth 4.4390e-04 1.0000e+00 weaklyHypermeth 1.3147e-02 0.7532262 weaklyHypermeth 3.7562e-01 1.00000 insignificant 0.163766 3.1338e-03 lowCoverage 1.3057e-01 lowCoverage 0.85789 0.856132 0.0075322 5 0.84745 0.84492 0.0025222 4.4433e-01 0.6023250 insignificant 1.0000e+00 1.00000 insignificant 6.2946e-01 0.714650 insignificant 1.00000000 1 insignificant -0.01068970 0.8050371 lowCoverage 1.00000 lowCoverage 0.705797 0.856132 -0.145407 5 0.689306 0.84492 -0.155618 0.84442866 1.0455e-02 weaklyHypometh 1.00000 2.5501e-01 insignificant 0.824470 5.4195e-02 insignificant 1 1.0000e+00 insignificant -0.174456 7.3153e-03 lowCoverage 0.3325137 lowCoverage chr9 93939721 93940721 95270 ENSG00000217311 0.21068 202 6 0.32313 38 5 0.062804 74 4 0.32568 348 8 0.530612 30 4 0.23241 287 8 0.32991 99 4 0.44444 7 0 0.080357 96 4 0.26737 71 4 0.42021 125 7 0.072564 104 4 0.36538 109 4 1.00000 1 0 0.035548 121 4 0.070391 82 4 0.050257 67 4 0.19471 156 3 0.14250 71 5 0.254991 234 8 0.40000 12 1 0.035714 74 4 0.34394 71 4 0.25000 10 0 0.47619 61 4 0.366276 139 8 0.070000 59 4 0.357143 19 2 0.030682 44 4 0.24719 107 7 0.38081 107 6 0.39393 167 6 0.200000 29 4 0.047727 33 3 0.5000000 58 4 0.17756 142 6 0.285714 18 1 0.090909 102 6 0.239536 240 8 0.33744 186 8 0.29683 312 8 0.062499 303 8 0.40224 134 5 0.12957 0.012821 0.067516 0.018809 0.192308 0.10997 0.044595 NA 0.046703 0.08272 0.096833 0.055178 0.0073964 NA 0.033082 0.065851 0.054851 0.072957 0.026923 0.049451 0.038462 0.0054945 0.026224 0.000000 0.0054945 0.017081 0.094231 0.000000 0.036058 0.030220 0.080512 0.16686 0.000000 0.0038462 0.0030317 0.011312 0.000000 0.0000000 0.0079576 0.011966 0.08087 0.059621 0.023623 0 0.11542 0.12384 -0.0028395 4 0.31031 0.34761 -0.0372921 9.0507e-01 0.3155023 lowCoverage 1.0000000 1.00000 lowCoverage 0.5898096 1.9879e-01 lowCoverage 1 1.0000000 lowCoverage -0.0086253 0.898659 lowCoverage 1 lowCoverage 0.11542 0.088949 0.0421916 6 0.31031 0.300483 0.0098310 2.1757e-04 8.2413e-01 weaklyHypermeth 5.7257e-03 1.0000e+00 weaklyHypermeth 4.1191e-04 0.98571267 weaklyHypermeth 2.0663e-02 1.00000 weaklyHypermeth 0.053712 5.3067e-01 lowCoverage 1.0000e+00 lowCoverage 0.11542 0.078365 0.0312285 6 0.31031 0.33225 -0.021938 2.4379e-01 6.5902e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.8131e-01 4.6428e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0029888 9.6956e-01 lowCoverage 1.0000000 lowCoverage 0.12471 0.086387 0.063635 4 0.36031 0.275443 0.084863 3.4511e-03 9.3705e-01 lowCoverage 7.6691e-02 1.0000e+00 lowCoverage 4.8546e-03 0.9937249 lowCoverage 1.6182e-01 1.00000 lowCoverage 0.062338 4.5295e-01 lowCoverage 1.0000e+00 lowCoverage 0.12471 0.078298 0.0298901 4 0.36031 0.30456 0.0557415 2.5313e-01 0.7591973 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.4223e-01 0.770716 lowCoverage 1.00000000 1 lowCoverage 0.01161414 0.8769562 lowCoverage 1.00000 lowCoverage 0.086387 0.078298 -0.014121 6 0.275443 0.30456 -0.029121 0.88545909 2.2019e-02 weaklyHypometh 1.00000 4.9788e-01 insignificant 0.999111 2.5642e-02 weaklyHypometh 1 8.2717e-01 insignificant -0.050724 5.7764e-01 lowCoverage 1.0000000 lowCoverage chr9 93973481 93974481 95273 ENSG00000220774 0.93651 63 5 0.93601 112 6 0.855840 75 6 1.00000 35 5 0.778846 48 4 0.95536 72 6 0.94444 50 6 0.63255 32 2 0.955556 41 6 0.98131 68 5 0.89399 138 6 0.915079 62 6 0.97083 83 6 NA 0 0 0.914920 71 6 0.736111 35 4 0.960709 69 5 0.90278 33 4 0.92088 106 6 0.907557 90 6 0.93914 64 6 0.750000 7 0 0.92051 51 5 0.74735 38 5 0.81250 8 0 0.983786 105 6 0.932692 36 2 1.000000 11 0 0.787500 37 2 0.96326 69 6 0.91667 83 5 0.89926 57 5 0.676944 80 6 0.703373 69 5 0.7222222 109 5 0.83333 13 0 0.900000 43 6 0.748026 57 5 0.960606 80 5 0.96154 62 6 0.94444 25 3 0.955556 41 4 0.76667 13 1 0.94518 0.959302 0.873435 1.000000 0.802996 0.95580 0.920543 0.72212 0.951163 0.97237 0.918402 0.873533 0.9651163 NA 0.909468 0.781008 0.966211 0.870155 0.927649 0.932723 0.918217 0.8705218 0.877996 0.727206 0.7756202 0.983321 0.896691 1.000000 0.857558 0.959197 0.926910 0.91511 0.641550 0.7014120 0.7545220 0.776009 0.910853 0.6744697 0.9744186 0.973166 0.91473 0.955039 0.724806 0 0.92518 0.92226 0.0043503 5 0.92492 0.91427 0.0106495 4.8737e-01 0.6628735 insignificant 1.0000000 1.00000 insignificant 0.8839518 4.6772e-01 insignificant 1 1.0000000 insignificant 0.0122399 0.717294 lowCoverage 1 lowCoverage 0.92518 0.714286 0.2101297 5 0.92492 0.728638 0.1962854 6.6342e-10 9.9996e-01 hypermethylated 3.3171e-08 1.0000e+00 hypermethylated 3.6224e-03 0.99678119 weaklyHypermeth 1.2075e-01 1.00000 insignificant 0.135979 8.7640e-03 lowCoverage 3.3708e-01 lowCoverage 0.92518 0.945701 -0.0209801 5 0.92492 0.94325 -0.018332 9.2463e-01 2.0448e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9618e-01 6.1883e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0177997 6.9426e-01 lowCoverage 1.0000000 lowCoverage 0.92226 0.714286 0.202821 5 0.91427 0.728638 0.185636 1.2913e-05 9.9991e-01 hypermethylated 4.1655e-04 1.0000e+00 hypermethylated 2.4398e-02 0.9983050 weaklyHypermeth 6.2559e-01 1.00000 insignificant 0.123739 1.6491e-02 lowCoverage 4.9973e-01 lowCoverage 0.92226 0.945701 -0.0284155 4 0.91427 0.94325 -0.0289811 8.6418e-01 0.3247288 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.8064e-01 0.228080 lowCoverage 1.00000000 1 lowCoverage -0.03003961 0.5312888 lowCoverage 1.00000 lowCoverage 0.714286 0.945701 -0.227136 4 0.728638 0.94325 -0.214617 0.99965626 1.0547e-03 lowCoverage 1.00000 3.6368e-02 lowCoverage 0.999872 2.5619e-03 lowCoverage 1 1.4233e-01 lowCoverage -0.153779 1.5970e-02 lowCoverage 0.5264641 lowCoverage chr9 93973915 93974915 95274 ENSG00000220774 0.93651 63 5 0.93601 112 6 0.855840 75 6 1.00000 35 5 0.778846 48 4 0.95536 72 6 0.94444 50 6 0.63255 32 2 0.955556 41 6 0.98131 68 5 0.89399 138 6 0.915079 62 6 0.97083 83 6 NA 0 0 0.914920 71 6 0.736111 35 4 0.960709 69 5 0.90278 33 4 0.92088 106 6 0.907557 90 6 0.93914 64 6 0.750000 7 0 0.92051 51 5 0.74735 38 5 0.81250 8 0 0.983786 105 6 0.932692 36 2 1.000000 11 0 0.787500 37 2 0.96326 69 6 0.91667 83 5 0.89926 57 5 0.676944 80 6 0.703373 69 5 0.7222222 109 5 0.83333 13 0 0.900000 43 6 0.748026 57 5 0.960606 80 5 0.96154 62 6 0.94444 25 3 0.955556 41 4 0.76667 13 1 0.94518 0.959302 0.873435 1.000000 0.802996 0.95580 0.920543 0.72212 0.951163 0.97237 0.918402 0.873533 0.9651163 NA 0.909468 0.781008 0.966211 0.870155 0.927649 0.932723 0.918217 0.8705218 0.877996 0.727206 0.7756202 0.983321 0.896691 1.000000 0.857558 0.959197 0.926910 0.91511 0.641550 0.7014120 0.7545220 0.776009 0.910853 0.6744697 0.9744186 0.973166 0.91473 0.955039 0.724806 0 0.92518 0.92226 0.0043503 5 0.92492 0.91427 0.0106495 4.8737e-01 0.6628735 insignificant 1.0000000 1.00000 insignificant 0.8839518 4.6772e-01 insignificant 1 1.0000000 insignificant 0.0122399 0.717294 lowCoverage 1 lowCoverage 0.92518 0.714286 0.2101297 5 0.92492 0.728638 0.1962854 6.6342e-10 9.9996e-01 hypermethylated 3.3171e-08 1.0000e+00 hypermethylated 3.6224e-03 0.99678119 weaklyHypermeth 1.2075e-01 1.00000 insignificant 0.135979 8.7640e-03 lowCoverage 3.3708e-01 lowCoverage 0.92518 0.945701 -0.0209801 5 0.92492 0.94325 -0.018332 9.2463e-01 2.0448e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9618e-01 6.1883e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0177997 6.9426e-01 lowCoverage 1.0000000 lowCoverage 0.92226 0.714286 0.202821 5 0.91427 0.728638 0.185636 1.2913e-05 9.9991e-01 hypermethylated 4.1655e-04 1.0000e+00 hypermethylated 2.4398e-02 0.9983050 weaklyHypermeth 6.2559e-01 1.00000 insignificant 0.123739 1.6491e-02 lowCoverage 4.9973e-01 lowCoverage 0.92226 0.945701 -0.0284155 4 0.91427 0.94325 -0.0289811 8.6418e-01 0.3247288 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.8064e-01 0.228080 lowCoverage 1.00000000 1 lowCoverage -0.03003961 0.5312888 lowCoverage 1.00000 lowCoverage 0.714286 0.945701 -0.227136 4 0.728638 0.94325 -0.214617 0.99965626 1.0547e-03 lowCoverage 1.00000 3.6368e-02 lowCoverage 0.999872 2.5619e-03 lowCoverage 1 1.4233e-01 lowCoverage -0.153779 1.5970e-02 lowCoverage 0.5264641 lowCoverage chr9 95631756 95632756 95292 ENSG00000211429 0.69145 172 5 0.70917 156 6 0.782307 73 6 0.82341 71 5 0.933920 70 6 0.87807 174 6 0.79205 106 6 0.84377 96 6 0.744219 61 3 0.87506 63 3 0.87510 144 6 0.679182 47 5 0.81015 101 5 0.83651 44 2 0.770833 114 5 0.650794 44 3 0.888889 17 3 0.61448 179 5 0.85271 158 5 0.780522 195 5 0.83170 67 5 0.703175 26 3 0.77794 155 6 0.78056 42 4 0.83000 31 5 0.825036 165 6 0.691090 139 5 1.000000 54 6 0.827234 170 6 0.84561 158 6 0.72250 221 6 0.88482 179 6 0.366394 211 6 0.076269 180 6 0.0000000 51 2 0.14394 19 1 0.321108 98 6 0.362592 207 6 0.711784 187 6 0.62745 189 6 0.58736 117 5 0.670230 164 6 0.69673 123 5 0.74752 0.676501 0.733673 0.806948 0.937003 0.88161 0.793082 0.79194 0.775992 0.88130 0.900247 0.660493 0.7788505 0.76902 0.786950 0.748996 0.835605 0.564209 0.888212 0.792388 0.796029 0.7150646 0.777469 0.821803 0.8437458 0.809360 0.777150 1.000000 0.801531 0.852433 0.726028 0.86279 0.284246 0.0688518 0.0839611 0.156894 0.286564 0.3310140 0.6871835 0.611692 0.63113 0.617776 0.648236 2 0.78609 0.81095 -0.0255582 6 0.78771 0.81158 -0.0238758 9.3400e-01 0.2476805 insignificant 1.0000000 1.00000 insignificant 0.9025663 1.8001e-01 insignificant 1 1.0000000 insignificant -0.0183419 0.563902 lowCoverage 1 lowCoverage 0.78609 0.236292 0.5535198 6 0.78771 0.278803 0.5089036 2.8331e-32 1.0000e+00 hypermethylated 1.4166e-29 1.0000e+00 hypermethylated 1.8339e-13 1.00000000 hypermethylated 9.1696e-11 1.00000 hypermethylated 0.579913 1.4897e-04 lowCoverage 1.4275e-02 lowCoverage 0.78609 0.641026 0.1417862 6 0.78771 0.66342 0.124285 2.8592e-06 9.9966e-01 weaklyHypermeth 9.5306e-04 1.00000000 weaklyHypermeth 2.2593e-06 9.9996e-01 weaklyHypermeth 7.5309e-04 1.0000000 weaklyHypermeth 0.1329182 1.0868e-03 lowCoverage 0.2716937 lowCoverage 0.81095 0.236292 0.574642 6 0.81158 0.278803 0.532779 4.6811e-28 1.0000e+00 hypermethylated 2.3406e-25 1.0000e+00 hypermethylated 2.2494e-12 1.0000000 hypermethylated 1.1247e-09 1.00000 hypermethylated 0.598255 8.8372e-05 lowCoverage 1.0550e-02 lowCoverage 0.81095 0.641026 0.1666863 6 0.81158 0.66342 0.1481608 6.1702e-09 0.9999911 weaklyHypermeth 2.0567e-06 1.00000 weaklyHypermeth 1.9498e-06 0.999998 weaklyHypermeth 0.00079942 1 weaklyHypermeth 0.15126016 0.0006478 weaklyHypermeth 0.21593 insignificant 0.236292 0.641026 -0.414083 6 0.278803 0.66342 -0.384619 1.00000000 2.3325e-12 hypomethylated 1.00000 1.0313e-09 hypomethylated 1.000000 2.9901e-07 hypomethylated 1 1.4950e-04 hypomethylated -0.446995 5.5565e-04 lowCoverage 0.0555645 lowCoverage chr9 96584121 96585121 95313 MIR24-1 ENSG00000148120 0.80148 196 5 0.85217 95 5 0.773763 91 5 0.92500 75 5 0.807619 36 5 0.77718 161 5 0.71833 43 5 0.77642 71 5 0.731416 72 5 0.77500 54 5 0.83545 122 5 0.844444 39 5 0.82895 51 5 NA 0 0 0.773571 76 5 0.700000 27 1 0.730357 44 5 0.80788 101 5 0.81667 61 5 0.895518 99 5 0.72000 28 3 0.734566 41 5 0.84294 152 5 0.92167 43 4 0.90000 22 1 0.859881 85 5 0.810119 27 3 0.875000 18 1 0.828095 44 5 0.83341 84 5 0.83976 60 5 0.90026 208 5 0.562093 106 5 0.155475 66 5 0.5951546 80 4 0.77229 52 5 0.497143 35 4 0.545764 77 5 0.766186 175 5 0.84878 170 5 0.82752 164 5 0.884594 157 5 0.82063 168 5 0.82414 0.856411 0.797541 0.949187 0.837011 0.81095 0.743631 0.82054 0.740783 0.80793 0.847840 0.849481 0.8492726 NA 0.802594 0.737805 0.778455 0.789536 0.856369 0.914077 0.788618 0.7517069 0.866942 0.896545 0.9085366 0.867078 0.808380 0.856193 0.856252 0.848294 0.868660 0.90857 0.544519 0.1516433 0.5294198 0.707053 0.506852 0.5042158 0.7978685 0.873541 0.85774 0.911696 0.860305 2 0.82034 0.87192 -0.0435489 5 0.81127 0.85934 -0.0480674 9.9775e-01 0.0134578 weaklyHypometh 1.0000000 1.00000 insignificant 0.9818665 4.5305e-02 weaklyHypometh 1 1.0000000 insignificant -0.0403240 0.084161 lowCoverage 1 lowCoverage 0.82034 0.543269 0.2754403 5 0.81127 0.545413 0.2658551 2.4744e-16 9.9998e-01 hypermethylated 1.9034e-14 1.0000e+00 hypermethylated 2.1351e-05 0.99950325 hypermethylated 1.3344e-03 1.00000 hypermethylated 0.277164 1.9697e-02 lowCoverage 6.5657e-01 lowCoverage 0.82034 0.822542 -0.0188140 5 0.81127 0.82791 -0.016643 7.8546e-01 2.7990e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.9798e-01 2.2521e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0310586 2.2213e-01 lowCoverage 1.0000000 lowCoverage 0.87192 0.543269 0.336315 5 0.85934 0.545413 0.313923 1.2024e-14 1.0000e+00 hypermethylated 1.0020e-12 1.0000e+00 hypermethylated 1.1891e-05 0.9992035 hypermethylated 1.3213e-03 1.00000 hypermethylated 0.317488 1.1228e-02 lowCoverage 3.8181e-01 lowCoverage 0.87192 0.822542 0.0217456 5 0.85934 0.82791 0.0314242 2.3107e-01 0.7698559 insignificant 1.0000e+00 1.00000 insignificant 3.3674e-01 0.601473 insignificant 1.00000000 1 insignificant 0.00926543 0.7317736 lowCoverage 1.00000 lowCoverage 0.543269 0.822542 -0.294445 5 0.545413 0.82791 -0.282498 0.99881878 9.5155e-08 hypomethylated 1.00000 7.3196e-06 hypomethylated 0.999871 3.5954e-04 hypomethylated 1 3.5954e-02 hypomethylated -0.308223 1.2598e-02 lowCoverage 0.4845273 lowCoverage chr9 97264480 97265480 95376 PTCH1 ENSG00000185920 0.12500 42 5 0.33648 202 7 0.417467 155 7 0.12963 16 1 0.243292 220 7 0.33929 55 2 0.29471 274 7 0.40483 185 7 0.306971 171 7 0.23776 165 6 0.23302 280 7 0.378720 265 6 0.11407 249 6 0.14286 15 1 0.040512 216 6 0.397728 139 6 0.171370 251 5 0.11667 21 1 0.44188 118 6 0.092857 62 6 0.16931 43 1 0.000000 16 0 0.20391 93 7 0.15597 88 7 0.11111 9 0 0.072506 339 7 0.039116 65 4 0.068027 42 5 0.180061 168 5 0.21376 328 7 0.16238 353 7 0.49750 79 6 0.000000 261 7 0.025475 172 7 0.0000000 108 6 NA 0 0 0.043897 93 5 0.003663 225 7 0.292572 45 2 0.20238 71 6 0.22222 9 0 0.000000 7 0 0.15625 29 1 0.15234 0.242900 0.418188 0.163194 0.259139 0.39453 0.299034 0.33453 0.333315 0.26600 0.351375 0.384158 0.1459727 0.19069 0.040199 0.394602 0.252999 0.162500 0.574353 0.181771 0.240741 0.1377685 0.349144 0.055258 0.1250000 0.135587 0.068080 0.048363 0.197716 0.116634 0.183286 0.65371 0.000000 0.0144314 0.0000000 NA 0.076755 0.0040064 0.3254076 0.187500 0.27083 0.000000 0.203125 0 0.22928 0.15958 0.0886378 7 0.29408 0.19766 0.0964281 6.5798e-06 0.9999990 weaklyHypermeth 0.0065798 1.00000 weaklyHypermeth 0.0015043 1.0000e+00 weaklyHypermeth 1 1.0000000 insignificant 0.0921181 0.058328 lowCoverage 1 lowCoverage 0.22928 0.013970 0.2271849 7 0.29408 0.011567 0.2825181 3.1792e-14 1.0000e+00 hypermethylated 2.1195e-12 1.0000e+00 hypermethylated 6.3542e-09 1.00000000 hypermethylated 1.0590e-06 1.00000 hypermethylated 0.233649 7.1235e-08 hypermethylated 3.5618e-05 hypermethylated 0.22928 0.167702 0.1403362 2 0.29408 0.16959 0.124495 9.8649e-04 1.0350e-01 lowCoverage 1.6441e-01 1.00000000 lowCoverage 6.9285e-03 8.0681e-01 lowCoverage 9.8979e-01 1.0000000 lowCoverage 0.0735705 2.3372e-01 lowCoverage 1.0000000 lowCoverage 0.15958 0.013970 0.145807 7 0.19766 0.011567 0.186090 1.9365e-06 1.0000e+00 weaklyHypermeth 7.7458e-05 1.0000e+00 weaklyHypermeth 8.0595e-04 1.0000000 weaklyHypermeth 3.8379e-02 1.00000 weaklyHypermeth 0.141531 2.6962e-03 lowCoverage 1.1723e-01 lowCoverage 0.15958 0.167702 0.0388627 2 0.19766 0.16959 0.0280668 2.4015e-01 0.0015524 lowCoverage 1.0000e+00 0.77622 lowCoverage 3.9265e-01 0.525415 lowCoverage 1.00000000 1 lowCoverage -0.01854755 0.7686178 lowCoverage 1.00000 lowCoverage 0.013970 0.167702 -0.151747 2 0.011567 0.16959 -0.158023 0.99914377 3.1446e-05 lowCoverage 1.00000 1.9654e-03 lowCoverage 0.999283 6.6705e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.160078 2.9429e-02 lowCoverage 0.8239681 lowCoverage chr9 98005794 98006794 95423 ENSG00000220713 0.95873 61 5 0.76959 157 6 0.908398 170 6 0.99275 78 4 0.928427 136 6 0.94393 97 6 0.90081 212 6 0.90945 131 6 0.871996 145 6 0.93514 73 3 0.92262 225 6 0.957633 117 3 0.87827 116 6 0.95833 24 3 0.939046 114 6 0.901212 83 6 0.824359 63 3 0.96875 15 1 0.97549 75 3 0.938471 72 6 0.85926 73 6 0.844444 16 1 0.86588 109 6 0.94048 68 6 0.93750 18 2 0.903331 196 6 0.805983 87 6 0.960317 60 4 0.903093 83 6 0.95532 221 5 0.92029 255 6 0.89637 141 6 0.065178 187 6 0.112213 142 6 0.0078125 113 4 0.00000 6 1 0.151383 137 6 0.164247 208 6 0.741228 103 5 0.74640 107 5 0.65490 61 4 0.536652 32 3 0.63706 119 5 0.96499 0.814186 0.920983 0.991187 0.927460 0.91338 0.897626 0.93299 0.822272 0.95829 0.896371 0.939726 0.8415783 0.91052 0.923741 0.877592 0.884637 0.975779 0.950318 0.911315 0.784985 0.7297297 0.846681 0.914093 0.9035577 0.947561 0.875676 0.942728 0.910191 0.938685 0.902647 0.90288 0.049816 0.1133742 0.0310752 0.069368 0.135054 0.1659647 0.6575391 0.737297 0.61685 0.446110 0.551281 0 0.89140 0.89601 0.0032929 6 0.90938 0.90688 0.0024930 6.6682e-01 0.5371295 insignificant 1.0000000 1.00000 insignificant 0.3837333 8.6008e-01 insignificant 1 1.0000000 insignificant 0.0198152 0.285370 lowCoverage 1 lowCoverage 0.89140 0.097100 0.8058729 6 0.90938 0.099840 0.8095355 2.8477e-81 1.0000e+00 hypermethylated 2.8477e-78 1.0000e+00 hypermethylated 1.5928e-15 1.00000000 hypermethylated 1.5928e-12 1.00000 hypermethylated 0.835699 3.9259e-08 lowCoverage 3.5618e-05 lowCoverage 0.89140 0.665877 0.2530313 5 0.90938 0.69317 0.216204 1.6050e-20 9.9999e-01 hypermethylated 1.6050e-17 1.00000000 hypermethylated 1.6519e-10 9.9414e-01 hypermethylated 1.6519e-07 1.0000000 hypermethylated 0.2559225 1.6942e-03 lowCoverage 0.3388344 lowCoverage 0.89601 0.097100 0.806217 6 0.90688 0.099840 0.807042 1.5812e-55 1.0000e+00 hypermethylated 1.5812e-52 1.0000e+00 hypermethylated 3.2149e-13 1.0000000 hypermethylated 3.2149e-10 1.00000 hypermethylated 0.815883 1.8986e-08 lowCoverage 1.8986e-05 lowCoverage 0.89601 0.665877 0.2531131 5 0.90688 0.69317 0.2137105 7.4793e-15 0.9997161 hypermethylated 7.4793e-12 1.00000 hypermethylated 1.1496e-07 0.993309 hypermethylated 0.00011496 1 hypermethylated 0.23610726 0.0021358 lowCoverage 0.35596 lowCoverage 0.097100 0.665877 -0.565471 5 0.099840 0.69317 -0.593332 1.00000000 8.5952e-21 hypomethylated 1.00000 8.5952e-18 hypomethylated 1.000000 2.7874e-08 hypomethylated 1 2.7874e-05 hypomethylated -0.579776 2.6546e-06 lowCoverage 0.0026546 lowCoverage chr9 99633153 99634153 95438 ENSG00000213601 0.25605 322 9 0.11649 669 9 0.326057 338 9 0.22107 302 8 0.145684 247 9 0.29261 600 8 0.14086 331 9 0.21802 436 9 0.168760 431 9 0.13638 326 9 0.34203 485 9 0.150595 241 9 0.18367 396 9 0.31922 213 8 0.182806 463 9 0.213200 215 9 0.320380 96 5 0.29483 351 8 0.13982 434 9 0.153699 494 9 0.30384 155 9 0.173654 296 8 0.26995 323 9 0.15239 307 9 0.19078 129 8 0.198067 630 9 0.093176 306 9 0.146506 251 8 0.185861 409 9 0.08247 785 9 0.27419 714 9 0.27696 525 9 0.274958 488 9 0.390236 149 9 0.3733154 622 6 0.10417 33 2 0.371443 416 9 0.514495 476 9 0.322890 403 8 0.13540 307 8 0.24294 281 8 0.223522 264 8 0.33242 311 8 0.20565 0.085890 0.286067 0.169526 0.125041 0.28600 0.109171 0.17043 0.127096 0.12244 0.296577 0.132473 0.1609089 0.25143 0.163593 0.172060 0.241755 0.254415 0.101081 0.137733 0.309908 0.1395996 0.194191 0.119409 0.1448097 0.139958 0.077725 0.163446 0.141495 0.063807 0.246017 0.23824 0.195069 0.2653362 0.2489905 0.209373 0.279603 0.4314669 0.2046166 0.122451 0.17725 0.143915 0.198994 8 0.18011 0.18178 0.0143840 9 0.18466 0.19092 -0.0062654 2.5278e-01 0.4050003 insignificant 1.0000000 1.00000 insignificant 0.4117987 8.8252e-01 insignificant 1 1.0000000 insignificant 0.0204576 0.455204 insignificant 1 insignificant 0.18021 0.340659 -0.1194904 9 0.20517 0.356357 -0.1511835 8.6001e-01 2.6510e-11 weaklyHypometh 1.0000e+00 8.8367e-09 weaklyHypometh 9.8631e-01 0.00281487 weaklyHypometh 1.0000e+00 0.88625 insignificant -0.121990 8.3592e-02 insignificant 1.0000e+00 insignificant 0.18011 0.156450 0.0028286 8 0.18466 0.21791 -0.033254 6.0144e-01 7.7779e-02 insignificant 1.0000e+00 1.00000000 insignificant 5.3383e-01 4.0508e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0353213 4.0964e-01 insignificant 1.0000000 insignificant 0.18184 0.340659 -0.148765 9 0.19626 0.356357 -0.160095 9.9098e-01 6.5875e-07 weaklyHypometh 1.0000e+00 2.1958e-04 weaklyHypometh 9.9480e-01 0.0023759 weaklyHypometh 1.0000e+00 0.79197 insignificant -0.142448 5.2509e-02 insignificant 1.0000e+00 insignificant 0.18178 0.156450 -0.0133645 8 0.19092 0.21791 -0.0269891 8.6190e-01 0.2195723 insignificant 1.0000e+00 1.00000 insignificant 9.3891e-01 0.307898 insignificant 1.00000000 1 insignificant -0.05577892 0.2236235 insignificant 1.00000 insignificant 0.340659 0.156550 0.109884 8 0.356357 0.24212 0.114234 0.00695454 9.7832e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.043391 9.6865e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.086669 2.2972e-01 insignificant 1.0000000 insignificant chr9 100405395 100406395 95459 TBC1D2 ENSG00000095383 0.88231 202 5 0.89178 158 5 0.847593 180 5 0.92239 217 4 0.863759 109 5 0.88975 272 5 0.93544 150 5 0.92280 184 5 0.897329 181 5 0.94832 154 5 0.90806 140 5 0.932824 138 5 0.90907 241 5 0.81450 63 4 0.901600 225 5 0.956522 58 2 0.750923 72 5 0.89724 209 4 0.92633 92 5 0.923770 154 5 0.95714 53 5 0.891668 86 4 0.91655 129 5 0.95870 81 5 0.98333 53 4 0.940118 192 5 0.830253 96 5 0.901709 108 5 0.908529 130 5 0.91835 199 5 0.94161 201 5 0.93701 187 5 0.588505 202 5 0.484012 115 5 0.8409329 170 3 0.71875 28 3 0.705394 105 5 0.897953 205 5 0.928575 174 5 0.94731 131 5 0.98000 154 4 0.890693 167 4 0.87363 128 5 0.87281 0.906610 0.844025 0.901371 0.846391 0.93076 0.946251 0.93445 0.924934 0.96314 0.891552 0.961280 0.9094037 0.80088 0.889485 0.909498 0.729010 0.871280 0.942308 0.926079 0.986511 0.9075416 0.885525 0.951678 0.9857010 0.919666 0.862815 0.924966 0.891534 0.924962 0.942665 0.93957 0.687025 0.4885753 0.8323455 0.710356 0.728571 0.9061177 0.9153560 0.955081 0.97672 0.981894 0.835955 4 0.89181 0.92475 -0.0314871 5 0.89430 0.92711 -0.0328192 9.8913e-01 0.0015195 weaklyHypometh 1.0000000 0.75976 insignificant 0.9178323 3.6696e-02 weaklyHypometh 1 1.0000000 insignificant -0.0276336 0.089729 lowCoverage 1 lowCoverage 0.89181 0.695758 0.1955707 5 0.89430 0.689790 0.2045051 3.6575e-11 9.9994e-01 weaklyHypermeth 2.1515e-09 1.0000e+00 weaklyHypermeth 6.7634e-05 0.99328403 weaklyHypermeth 3.9785e-03 1.00000 weaklyHypermeth 0.190190 2.8503e-02 lowCoverage 8.3831e-01 lowCoverage 0.89181 0.938992 -0.0395433 5 0.89430 0.93821 -0.043920 9.9751e-01 8.0992e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8343e-01 3.4431e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0279271 2.4581e-01 lowCoverage 1.0000000 lowCoverage 0.92475 0.695758 0.226093 5 0.92711 0.689790 0.237324 8.7728e-09 1.0000e+00 hypermethylated 5.1604e-07 1.0000e+00 hypermethylated 7.8474e-05 0.9998024 hypermethylated 5.6053e-03 1.00000 hypermethylated 0.217824 1.7154e-02 lowCoverage 5.0454e-01 lowCoverage 0.92475 0.938992 -0.0119060 5 0.92711 0.93821 -0.0111007 9.1588e-01 0.4100424 insignificant 1.0000e+00 1.00000 insignificant 9.4901e-01 0.401079 insignificant 1.00000000 1 insignificant -0.00029351 0.9898697 lowCoverage 1.00000 lowCoverage 0.695758 0.938992 -0.205579 5 0.689790 0.93821 -0.248425 0.99998313 1.0678e-04 hypomethylated 1.00000 6.2810e-03 hypomethylated 0.999965 2.0460e-03 weaklyHypometh 1 1.2787e-01 insignificant -0.218118 1.6320e-02 lowCoverage 0.5264641 lowCoverage chr9 110420965 110421965 96245 ENSG00000222512 0.665607 188 6 0.690351 87 5 0.546717 51 4 0.70653 266 6 1.000000 7 0 0.65381 167 6 0.600000 22 4 0.67953 95 4 0.783333 45 4 0.830556 67 4 0.819444 120 6 0.69444 28 4 0.728720 96 4 NA 0 0 0.765152 48 4 0.66667 12 0 0.77222 22 1 0.700965 271 6 0.73766 117 6 0.755029 222 6 0.71667 29 4 0.64759 84 6 0.62310 110 6 0.791440 58 4 0.76483 45 4 0.70523 197 6 0.710141 119 4 0.696338 40 4 0.64730 167 5 0.761591 221 6 0.771645 196 6 0.75374 222 6 0.650280 101 5 0.6197691 91 4 0.872277 94 6 0.333333 6 0 0.491880 42 4 0.6634181 209 6 0.683883 216 6 0.71124 178 6 0.705573 208 6 0.703746 174 6 0.701988 308 6 0.741178 0.723058 0.578012 0.728277 1.000000 0.65297 0.419048 0.69568 0.680628 0.755556 0.743339 0.807540 0.733230 NA 0.790043 0.69841 0.748016 0.723046 0.716395 0.719478 0.81548 0.681655 0.63862 0.697502 0.652342 0.690732 0.70201 0.702952 0.722824 0.760481 0.783561 0.729950 0.717391 0.6078644 0.9230769 0.29761905 0.516789 0.6320309 0.667703 0.742399 0.663670 0.675940 0.716093 0 0.71103 0.72110 -0.0091992 6 0.712481 0.724593 -0.0121116 0.76699 0.402389 insignificant 1 1 insignificant 0.19483 0.478158 insignificant 1 1 insignificant 0.0103436 0.707414 lowCoverage 1 lowCoverage 0.71103 0.674033 0.037456 6 0.712481 0.680076 0.032406 3.6428e-03 0.74195 weaklyHypermeth 1.0930e-01 1 insignificant 2.3898e-02 0.99024 weaklyHypermeth 7.9661e-01 1 insignificant 0.12098475 1.6840e-01 lowCoverage 1.0000e+00 lowCoverage 0.71103 0.686347 0.0214653 6 0.712481 0.695500 0.01698141 3.3444e-01 0.7343806 insignificant 1.0000e+00 1 insignificant 1.7038e-01 0.868029 insignificant 1.0000e+00 1 insignificant 0.0248583 0.2863156 lowCoverage 1.0000 lowCoverage 0.72110 0.674033 0.046998 6 0.724593 0.680076 0.044517 1.3577e-02 0.92648 weaklyHypermeth 3.8792e-01 1 insignificant 1.1905e-01 0.93041 insignificant 1.0000e+00 1 insignificant 0.110641 1.9812e-01 lowCoverage 1.0000e+00 lowCoverage 0.72110 0.686347 0.0296974 6 0.72459 0.695500 0.029093 8.8107e-02 0.6998499 insignificant 1.0000000 1.00000 insignificant 2.6610e-01 0.5255421 insignificant 1.0000e+00 1 insignificant 0.01451470 0.39615456 insignificant 1.00000 insignificant 0.674033 0.686347 -0.016785 6 0.680076 0.695500 -0.015424 0.43194 1.5768e-02 weaklyHypometh 1 5.4371e-01 insignificant 0.94646 9.7102e-02 insignificant 1 1.00000000 insignificant -0.096126 2.5030e-01 lowCoverage 1.0000e+00 lowCoverage chr9 111269749 111270749 96269 PTPN3 ENSG00000070159 0.857275 303 7 0.780341 130 7 0.630124 99 7 0.89737 159 7 0.802041 50 6 0.76996 252 7 0.909872 135 6 0.81281 89 7 0.855655 57 5 0.902778 69 6 0.892185 223 7 0.81293 56 6 0.917140 101 7 0.87500 17 1 0.877328 101 7 0.75000 56 6 0.60714 66 6 0.833876 149 7 0.91180 138 7 0.865529 183 7 0.85846 61 6 0.85595 103 7 0.79633 222 7 0.750097 67 7 0.90130 61 7 0.79981 150 7 0.895933 83 5 0.711905 36 4 0.88142 84 6 0.950700 161 7 0.785781 114 7 0.84525 280 7 0.842208 78 6 0.8000696 127 7 0.839681 131 7 0.855128 40 4 0.678255 113 6 0.8017457 157 7 0.914477 259 7 0.88068 288 7 0.863941 243 7 0.908886 264 7 0.821614 244 7 0.883564 0.777204 0.729803 0.903824 0.863649 0.87231 0.911729 0.85545 0.860049 0.894562 0.884070 0.874693 0.928536 0.893088 0.905402 0.77653 0.803488 0.897841 0.919545 0.877466 0.86641 0.872327 0.83286 0.811145 0.895063 0.783344 0.88751 0.870520 0.827255 0.947152 0.814610 0.867901 0.865249 0.8168846 0.8135400 0.82707355 0.736731 0.7760811 0.914126 0.904263 0.903834 0.933374 0.848400 5 0.85573 0.85443 0.0051070 7 0.816922 0.825277 -0.0083557 0.68757 0.836145 insignificant 1 1 insignificant 0.62732 0.750269 insignificant 1 1 insignificant -0.0080205 0.775643 insignificant 1 insignificant 0.85614 0.806502 0.053438 7 0.821184 0.820473 0.000711 2.1746e-03 0.91620 weaklyHypermeth 7.0148e-02 1 weaklyHypermeth 2.0519e-02 0.87545 weaklyHypermeth 7.3282e-01 1 insignificant 0.02520999 4.6046e-01 insignificant 1.0000e+00 insignificant 0.85661 0.901387 -0.0344089 7 0.843258 0.878045 -0.03478767 9.6982e-01 0.0772772 insignificant 1.0000e+00 1 insignificant 9.2114e-01 0.118004 insignificant 1.0000e+00 1 insignificant -0.0498624 0.0709961 insignificant 1.0000 insignificant 0.85421 0.806502 0.048264 7 0.801423 0.820473 -0.019050 1.1501e-02 0.96138 weaklyHypermeth 3.3825e-01 1 insignificant 3.6457e-02 0.92124 weaklyHypermeth 1.0000e+00 1 insignificant 0.033230 3.3890e-01 insignificant 1.0000e+00 insignificant 0.85471 0.901387 -0.0391037 7 0.84448 0.878045 -0.033562 9.8517e-01 0.0190021 weaklyHypometh 1.0000000 1.00000 insignificant 9.4187e-01 0.0946169 insignificant 1.0000e+00 1 insignificant -0.04184195 0.13162266 insignificant 1.00000 insignificant 0.805901 0.901387 -0.089103 7 0.794826 0.878045 -0.083219 0.99955 4.5634e-04 weaklyHypometh 1 2.5352e-02 weaklyHypometh 0.99530 1.6086e-03 weaklyHypometh 1 0.22980181 insignificant -0.075072 4.3423e-02 weaklyHypometh 1.0000e+00 insignificant chr9 113604670 113605670 96326 ENSG00000218219 0.530356 326 8 0.456589 192 6 0.364560 147 8 0.52920 270 8 0.430734 57 6 0.54460 190 6 0.415865 72 6 0.45656 94 6 0.533991 61 6 0.516450 48 4 0.524676 214 8 0.46667 32 2 0.445361 89 5 0.45043 62 6 0.483333 80 6 0.35000 19 2 0.33333 3 0 0.601296 388 8 0.58392 112 6 0.545759 124 6 0.48575 38 1 0.63333 12 0 0.46969 163 6 0.428671 73 6 0.51464 95 5 0.56028 125 6 0.410930 47 3 0.482993 40 4 0.52321 160 6 0.471446 151 7 0.529582 130 6 0.54214 155 6 0.390031 178 6 0.4041667 82 6 0.487689 142 6 0.333333 14 0 0.412279 99 6 0.5645191 174 8 0.529745 262 8 0.50646 207 5 0.563289 310 8 0.531018 223 8 0.509316 287 8 0.478317 0.451168 0.333944 0.466114 0.345834 0.48476 0.442472 0.40501 0.451467 0.510878 0.430520 0.378632 0.395736 0.490913 0.418803 0.36399 0.326898 0.512070 0.472001 0.441804 0.52084 0.426195 0.41290 0.296975 0.420548 0.467580 0.36466 0.438339 0.431502 0.478549 0.424563 0.444168 0.416320 0.4213675 0.3939394 0.23719195 0.441671 0.4905672 0.454159 0.500598 0.450343 0.465892 0.476081 1 0.43760 0.43230 0.0017131 6 0.504965 0.497028 0.0079370 0.21195 0.373950 insignificant 1 1 insignificant 0.38491 0.630303 insignificant 1 1 insignificant -0.0262046 0.287180 lowCoverage 1 lowCoverage 0.43760 0.413643 0.034679 6 0.504965 0.435873 0.069092 5.8109e-03 0.97150 weaklyHypermeth 1.6141e-01 1 insignificant 2.3830e-02 0.93412 weaklyHypermeth 7.9661e-01 1 insignificant 0.04618088 2.5208e-01 insignificant 1.0000e+00 insignificant 0.43760 0.501939 -0.0123961 6 0.504965 0.525059 -0.02009433 8.5207e-01 0.3603519 insignificant 1.0000e+00 1 insignificant 9.4224e-01 0.193133 insignificant 1.0000e+00 1 insignificant -0.0497815 0.0188540 weaklyHypometh 1.0000 insignificant 0.43230 0.413643 0.033707 6 0.497028 0.435873 0.061155 4.3950e-02 0.94452 weaklyHypermeth 1.0000e+00 1 insignificant 1.2415e-01 0.92935 insignificant 1.0000e+00 1 insignificant 0.072385 9.1101e-02 lowCoverage 1.0000e+00 lowCoverage 0.43230 0.501939 -0.0132707 6 0.49703 0.525059 -0.028031 7.7468e-01 0.1662507 insignificant 1.0000000 1.00000 insignificant 9.1534e-01 0.1042913 insignificant 1.0000e+00 1 insignificant -0.02357684 0.25982762 lowCoverage 1.00000 lowCoverage 0.413643 0.501939 -0.047011 6 0.435873 0.525059 -0.089186 0.99568 1.0285e-02 weaklyHypometh 1 3.9557e-01 insignificant 0.99686 2.9157e-02 weaklyHypometh 1 1.00000000 insignificant -0.095962 3.3636e-02 weaklyHypometh 1.0000e+00 insignificant chr9 115283200 115284200 96356 RGS3 ENSG00000138835 0.802733 280 5 0.843225 73 4 0.688612 67 5 0.76632 173 5 0.742582 52 4 0.74040 329 6 0.609519 108 5 0.92299 98 5 0.646991 70 4 0.834666 60 4 0.929438 162 6 0.73230 54 3 0.907374 67 4 0.71429 13 0 0.760913 73 3 0.68214 60 3 0.88982 60 3 0.911260 200 5 0.82879 111 5 0.888855 227 5 0.86601 35 2 0.92791 44 2 0.71172 117 4 0.641481 55 5 0.83801 73 4 0.93056 139 5 0.613139 80 4 0.614957 55 3 0.90357 92 5 0.726403 145 5 0.554847 158 6 0.90182 278 6 0.759403 119 6 0.6362193 83 5 0.595741 126 5 0.513399 83 3 0.713755 107 5 0.8396906 148 5 0.601628 214 6 0.93430 205 6 0.788654 201 4 0.827346 185 4 0.745012 211 6 0.950685 0.810526 0.850537 0.946206 0.853741 0.89048 0.868111 0.93695 0.812373 0.781101 0.932144 0.876130 0.932613 0.953912 0.927011 0.91727 0.862355 0.875196 0.852273 0.900088 0.91643 0.887262 0.75330 0.870244 0.964902 0.963139 0.85640 0.896779 0.898754 0.925500 0.869255 0.892146 0.887923 0.7668937 0.3642627 0.84829512 0.893842 0.8626573 0.909094 0.954795 0.924215 0.945956 0.913872 2 0.88570 0.87726 0.0060868 5 0.776727 0.688718 0.0880098 0.30273 0.937160 insignificant 1 1 insignificant 0.51149 0.845982 insignificant 1 1 insignificant 0.0229590 0.624155 lowCoverage 1 lowCoverage 0.88570 0.807808 0.070587 5 0.776727 0.749446 0.027282 3.7162e-03 0.97693 weaklyHypermeth 1.0930e-01 1 insignificant 2.0283e-01 0.97447 insignificant 1.0000e+00 1 insignificant 0.11579307 6.3809e-02 lowCoverage 1.0000e+00 lowCoverage 0.88570 0.928150 -0.0326564 5 0.776727 0.605280 0.17144785 9.4554e-01 0.2605034 insignificant 1.0000e+00 1 insignificant 8.8295e-01 0.119054 insignificant 1.0000e+00 1 insignificant 0.0127730 0.8355642 lowCoverage 1.0000 lowCoverage 0.87726 0.807808 0.065186 5 0.688718 0.749446 -0.060728 6.9316e-02 0.93753 insignificant 1.0000e+00 1 insignificant 4.3263e-01 0.95290 insignificant 1.0000e+00 1 insignificant 0.092834 1.6626e-01 lowCoverage 1.0000e+00 lowCoverage 0.87726 0.928150 -0.0367967 5 0.68872 0.605280 0.083438 9.5591e-01 0.2694817 insignificant 1.0000000 1.00000 insignificant 9.9348e-01 0.2496491 insignificant 1.0000e+00 1 insignificant -0.01018606 0.88402593 lowCoverage 1.00000 lowCoverage 0.807808 0.928150 -0.105797 5 0.749446 0.605280 0.144166 0.99985 2.1953e-02 weaklyHypometh 1 7.3178e-01 insignificant 0.99936 2.4460e-02 weaklyHypometh 1 1.00000000 insignificant -0.103020 1.9169e-01 lowCoverage 1.0000e+00 lowCoverage chr9 115923850 115924850 96414 KIF12 ENSG00000136883 0.817927 147 5 0.763253 489 5 0.754200 201 5 0.85159 134 5 0.862982 121 5 0.84344 240 5 0.889014 311 5 0.87865 183 5 0.647607 157 5 0.894017 133 5 0.845921 335 5 0.78056 85 5 0.861965 121 5 0.91823 131 5 0.837682 240 5 0.95256 62 5 NA 0 0 0.805645 123 5 0.89100 395 5 0.832021 228 5 0.71536 95 5 0.84711 85 5 0.82414 182 5 0.954444 144 5 0.82381 33 5 0.91687 470 5 0.786698 146 5 0.782438 98 5 0.86621 491 5 0.898999 512 5 0.893212 680 5 0.89352 248 5 0.095985 260 5 0.1041872 143 5 0.200000 354 5 NA 0 0 0.193568 237 5 0.0810874 391 5 0.889064 201 5 0.81814 145 5 0.745250 94 5 0.859308 123 5 0.852664 141 5 0.817006 0.762103 0.753202 0.852278 0.863971 0.84253 0.888707 0.87872 0.775283 0.892521 0.846067 0.937815 0.861642 0.917065 0.836621 0.95242 NA 0.804798 0.890196 0.830373 0.71857 0.812560 0.82261 0.953553 0.823263 0.916575 0.78327 0.939103 0.866178 0.898538 0.892036 0.893086 0.094245 0.1035934 0.1963746 NA 0.193409 0.1001846 0.888026 0.816573 0.746598 0.857326 0.849899 5 0.84854 0.88348 -0.0349121 5 0.603734 0.770607 -0.1668730 0.99996 0.046832 weaklyHypometh 1 1 insignificant 0.99880 0.191809 insignificant 1 1 insignificant -0.0119034 0.638562 lowCoverage 1 lowCoverage 0.84876 0.155957 0.685965 5 0.704357 0.123622 0.580735 1.6553e-53 1.00000 hypermethylated 8.2764e-51 1 hypermethylated 2.2913e-11 1.00000 hypermethylated 6.8435e-09 1 hypermethylated 0.70336406 3.3063e-08 lowCoverage 1.1021e-05 lowCoverage 0.84898 0.842330 0.0036107 5 0.845228 0.840139 0.00508864 1.2297e-01 0.0963458 insignificant 1.0000e+00 1 insignificant 5.7638e-02 0.249856 insignificant 1.0000e+00 1 insignificant 0.0054450 0.8571426 lowCoverage 1.0000 lowCoverage 0.88376 0.155957 0.725492 5 0.899042 0.123622 0.775420 8.9497e-41 1.00000 hypermethylated 4.4748e-38 1 hypermethylated 6.4048e-10 1.00000 hypermethylated 1.6012e-07 1 hypermethylated 0.715267 4.1067e-09 lowCoverage 1.3689e-06 lowCoverage 0.88372 0.842330 0.0374995 5 0.87885 0.840139 0.038711 1.7717e-02 0.9275271 weaklyHypermeth 1.0000000 1.00000 insignificant 6.0429e-02 0.8923307 insignificant 1.0000e+00 1 insignificant 0.01734842 0.59354534 insignificant 1.00000 insignificant 0.156069 0.842330 -0.690357 5 0.148346 0.840139 -0.691793 1.00000 3.4304e-22 hypomethylated 1 1.7152e-19 hypomethylated 1.00000 9.1466e-07 hypomethylated 1 0.00045733 hypomethylated -0.697919 4.7121e-08 lowCoverage 1.5707e-05 lowCoverage chr9 115965393 115966393 96417 COL27A1 ENSG00000196739 0.394059 295 9 0.247330 355 9 0.450742 173 8 0.33543 195 8 0.372215 165 8 0.44788 464 9 0.341232 190 9 0.36309 206 8 0.392202 192 9 0.247340 125 8 0.460579 347 9 0.24189 95 8 0.206117 203 7 0.37992 128 4 0.247948 271 8 0.43053 84 7 0.20852 46 3 0.242278 252 7 0.13111 366 7 0.325521 370 9 0.44143 104 7 0.14991 178 6 0.33122 230 7 0.272043 149 8 0.21853 80 7 0.40510 414 9 0.247884 384 8 0.250583 121 7 0.26173 204 8 0.294332 450 9 0.215489 607 9 0.54578 366 9 0.046250 265 9 0.0793267 228 9 0.265329 186 5 0.011905 77 6 0.044640 260 9 0.1133154 393 9 0.240809 425 9 0.18038 422 9 0.293114 354 8 0.062901 247 7 0.274829 291 8 0.360186 0.180720 0.348674 0.313823 0.280113 0.35448 0.297534 0.27641 0.252513 0.260816 0.402755 0.229146 0.093807 0.251980 0.177226 0.43232 0.226447 0.208663 0.145384 0.278733 0.50080 0.063023 0.27679 0.251900 0.211546 0.187061 0.20694 0.224351 0.251241 0.122241 0.151676 0.509306 0.023722 0.0208169 0.1962180 0.00742115 0.034365 0.0358735 0.133442 0.106973 0.098223 0.072634 0.164405 7 0.29323 0.24916 0.0352598 9 0.397415 0.284994 0.1124211 0.09303 0.995729 insignificant 1 1 insignificant 0.28939 0.982567 insignificant 1 1 insignificant 0.0204598 0.601532 insignificant 1 insignificant 0.29308 0.080199 0.214023 9 0.337156 0.082665 0.254491 1.0611e-19 1.00000 hypermethylated 1.7685e-17 1 hypermethylated 2.0713e-14 1.00000 hypermethylated 2.0713e-11 1 hypermethylated 0.22983459 5.2753e-04 hypermethylated 3.7681e-02 hypermethylated 0.29308 0.172037 0.1441628 8 0.337156 0.189758 0.14739846 3.6273e-09 0.9993356 weaklyHypermeth 3.6273e-06 1 weaklyHypermeth 6.0716e-08 0.999972 weaklyHypermeth 6.0716e-05 1 weaklyHypermeth 0.1128894 0.0502922 insignificant 1.0000 insignificant 0.24901 0.080199 0.177670 9 0.280160 0.082665 0.197495 6.2001e-10 1.00000 weaklyHypermeth 6.8890e-08 1 weaklyHypermeth 1.8358e-11 1.00000 weaklyHypermeth 9.1792e-09 1 weaklyHypermeth 0.209375 1.0650e-03 weaklyHypermeth 9.6815e-02 weaklyHypermeth 0.24901 0.172037 0.1110341 8 0.28016 0.189758 0.090402 1.2611e-03 0.9991871 weaklyHypermeth 0.1801608 1.00000 insignificant 5.9111e-05 0.9999302 weaklyHypermeth 1.9704e-02 1 weaklyHypermeth 0.09242955 0.11225700 insignificant 1.00000 insignificant 0.080199 0.172037 -0.085875 8 0.082665 0.189758 -0.107093 1.00000 1.1039e-04 weaklyHypometh 1 9.1988e-03 weaklyHypometh 1.00000 8.2079e-05 weaklyHypometh 1 0.02051965 weaklyHypometh -0.116945 6.6927e-02 insignificant 1.0000e+00 insignificant chr9 116189660 116190660 96422 AKNA ENSG00000106948 0.314794 178 5 0.280363 295 7 0.471024 189 7 0.32925 112 5 0.444878 131 7 0.55157 240 6 0.285139 280 7 0.30384 183 7 0.146549 303 7 0.307083 196 7 0.482625 288 7 0.35085 208 7 0.048052 300 7 0.00000 5 0 0.202568 240 7 0.32863 148 6 0.23479 345 7 0.030225 192 3 0.13964 249 7 0.102135 275 7 0.63033 91 7 0.23190 63 3 0.44669 191 7 0.457223 64 5 0.38296 132 3 0.19395 314 7 0.494262 154 6 0.585073 71 7 0.45194 196 7 0.215692 372 7 0.103312 492 7 0.45494 247 6 0.035777 288 7 0.0161327 222 7 0.012766 151 5 0.000000 106 3 0.079545 112 7 0.0015528 276 7 0.065160 246 7 0.18524 208 6 0.132008 172 3 0.065536 254 3 0.215757 199 3 0.241595 0.235589 0.325435 0.234262 0.241771 0.44179 0.229498 0.28158 0.134748 0.280387 0.410638 0.206391 0.048067 NA 0.194244 0.18429 0.120632 0.070165 0.128509 0.070302 0.58207 0.139420 0.35537 0.461338 0.135690 0.191900 0.37407 0.405719 0.434924 0.084431 0.089363 0.405204 0.039667 0.0073488 0.0209020 0.00074007 0.068836 0.0044466 0.042271 0.115188 0.020339 0.047312 0.084554 3 0.25981 0.26979 -0.0165853 7 0.200016 0.347949 -0.1479328 0.98539 0.593129 insignificant 1 1 insignificant 1.00000 0.045507 weaklyHypometh 1 1 insignificant -0.1196580 0.054358 insignificant 1 insignificant 0.25987 0.018182 0.230947 7 0.220018 0.047815 0.172203 7.8679e-14 1.00000 hypermethylated 7.8679e-12 1 hypermethylated 2.7374e-11 1.00000 hypermethylated 6.8435e-09 1 hypermethylated 0.24340383 1.0501e-06 hypermethylated 1.5002e-04 hypermethylated 0.26017 0.056534 0.1506653 4 0.275022 0.159542 0.11548067 5.1595e-08 0.9995986 lowCoverage 1.2899e-05 1 lowCoverage 3.9511e-07 0.999625 lowCoverage 1.9756e-04 1 lowCoverage 0.1349600 0.0103945 lowCoverage 1.0000 lowCoverage 0.26949 0.018182 0.250870 7 0.282744 0.047815 0.234929 8.1629e-10 1.00000 hypermethylated 8.1629e-08 1 hypermethylated 1.1501e-11 1.00000 hypermethylated 9.1792e-09 1 hypermethylated 0.363062 6.9426e-06 hypermethylated 1.7357e-03 hypermethylated 0.26971 0.056534 0.1927540 4 0.35343 0.159542 0.193888 3.1379e-06 0.9999834 lowCoverage 0.0010460 1.00000 lowCoverage 7.4351e-08 0.9999998 lowCoverage 7.4351e-05 1 lowCoverage 0.25461798 0.00042447 lowCoverage 0.14149 lowCoverage 0.018229 0.056534 -0.044355 4 0.059769 0.159542 -0.099773 0.84235 1.6947e-03 lowCoverage 1 7.7031e-02 lowCoverage 0.96087 1.0648e-02 lowCoverage 1 0.66552269 lowCoverage -0.108444 2.0068e-02 lowCoverage 9.1219e-01 lowCoverage chr9 119289649 119290649 96715 ASTN2 ENSG00000148219 0.091114 171 3 0.071107 132 7 0.054545 109 5 0.08031 188 7 0.085119 125 7 0.13276 218 7 0.048611 115 5 0.10126 154 5 0.084416 125 5 0.083333 159 5 0.085498 132 7 0.10390 128 5 0.166708 132 4 0.11735 110 5 0.066939 190 5 0.17416 183 4 0.00000 22 1 0.200000 159 2 0.12363 67 2 0.054845 187 4 0.10714 29 3 0.00000 67 1 0.22706 78 7 0.089286 72 6 0.17500 44 3 0.11715 172 7 0.032468 134 5 0.025385 81 4 0.12500 48 2 0.089767 181 7 0.083161 175 5 0.12838 128 5 0.000000 76 5 0.0049261 66 2 0.014286 39 1 0.000000 16 1 0.014423 124 6 0.0285914 112 5 0.092926 220 7 0.10227 141 5 0.083742 148 3 0.134159 97 2 0.081876 191 6 0.081071 0.082271 0.023244 0.061328 0.049361 0.06422 0.027580 0.06687 0.052944 0.045455 0.036695 0.042208 0.095208 0.080222 0.041071 0.12167 0.042582 0.034091 0.066652 0.039288 0.14002 0.000000 0.10148 0.053267 0.074574 0.050804 0.01937 0.038462 0.046165 0.053235 0.058422 0.055283 0.000000 0.0235110 0.0034767 0.00162962 0.055726 0.0678038 0.055439 0.053267 0.082501 0.067282 0.044301 1 0.11511 0.10174 -0.0059111 5 0.082091 0.094895 -0.0128034 0.69552 0.280841 insignificant 1 1 insignificant 0.81669 0.381991 insignificant 1 1 insignificant -0.0037044 0.862451 lowCoverage 1 lowCoverage 0.11511 0.023095 0.150526 5 0.082091 0.011431 0.070660 3.5449e-06 0.87287 weaklyHypermeth 1.8657e-04 1 weaklyHypermeth 6.3075e-03 0.99377 weaklyHypermeth 3.0036e-01 1 insignificant 0.08590832 1.0011e-07 lowCoverage 2.5027e-05 lowCoverage 0.11515 0.240903 -0.0159480 3 0.093818 0.093112 0.00070629 2.1440e-01 0.7748938 lowCoverage 1.0000e+00 1 lowCoverage 3.2373e-01 0.841915 lowCoverage 1.0000e+00 1 lowCoverage -0.0027159 0.8503905 lowCoverage 1.0000 lowCoverage 0.10174 0.023095 0.123635 5 0.094895 0.011431 0.083464 1.4286e-04 0.71878 weaklyHypermeth 5.9524e-03 1 weaklyHypermeth 2.1904e-02 0.98972 weaklyHypermeth 8.7614e-01 1 insignificant 0.089613 4.3885e-04 lowCoverage 4.3885e-02 lowCoverage 0.10182 0.240903 -0.0030544 3 0.10845 0.093112 0.015339 1.0744e-01 0.7635771 lowCoverage 1.0000000 1.00000 lowCoverage 1.6011e-01 0.8732736 lowCoverage 1.0000e+00 1 lowCoverage 0.00098856 0.96240358 lowCoverage 1.00000 lowCoverage 0.023202 0.240903 -0.186010 3 0.013064 0.093112 -0.080048 0.96122 5.4516e-03 lowCoverage 1 2.2715e-01 lowCoverage 0.99667 3.6985e-01 lowCoverage 1 1.00000000 lowCoverage -0.088624 1.8918e-04 lowCoverage 2.7025e-02 lowCoverage chr9 120807225 120808225 96905 ENSG00000220678 0.906635 316 7 0.891481 74 5 0.779027 110 8 0.93651 143 7 0.988636 64 8 0.75628 197 8 0.775694 42 3 0.63869 50 5 0.921156 48 4 0.852796 52 3 0.907773 126 8 0.84583 40 6 0.870730 77 7 NA 0 0 0.827911 78 6 0.82099 58 5 0.62398 57 7 0.912031 146 7 0.79365 76 6 0.858173 142 7 0.97222 34 3 0.73237 44 3 0.88872 165 9 0.821429 45 5 0.74352 33 4 0.89386 114 6 0.813492 43 4 0.521164 25 2 0.77083 71 5 0.832336 98 6 0.885000 71 4 0.85237 204 8 0.847619 95 6 0.6594276 48 4 0.851773 154 8 0.885714 30 4 0.914657 49 5 0.8598856 88 6 0.936132 236 7 0.92629 197 7 0.899707 157 7 0.916063 233 7 0.930904 208 7 0.898712 0.834015 0.708142 0.916121 0.982485 0.85991 0.779918 0.77392 0.893453 0.921958 0.845230 0.848012 0.889257 NA 0.862299 0.87615 0.700693 0.911839 0.903670 0.812920 0.96330 0.815191 0.93199 0.780359 0.798547 0.926840 0.81712 0.770642 0.893540 0.846617 0.866650 0.790479 0.817909 0.7502780 0.8622436 0.82876842 0.831928 0.7671515 0.913543 0.851611 0.836541 0.902737 0.949758 2 0.85812 0.84794 0.0122410 6 0.860934 0.829808 0.0311265 0.31113 0.954215 insignificant 1 1 insignificant 0.42150 0.820851 insignificant 1 1 insignificant 0.0266528 0.506588 lowCoverage 1 lowCoverage 0.85812 0.838362 0.031642 5 0.860934 0.802591 0.058344 4.5033e-02 0.83477 weaklyHypermeth 1.0000e+00 1 insignificant 1.1629e-01 0.59250 insignificant 1.0000e+00 1 insignificant 0.00074894 9.8642e-01 insignificant 1.0000e+00 insignificant 0.85812 0.923375 -0.0560312 6 0.860934 0.929987 -0.06905309 9.9967e-01 0.0093554 weaklyHypometh 1.0000e+00 1 insignificant 9.9657e-01 0.013058 weaklyHypometh 1.0000e+00 1 insignificant -0.0845581 0.0012486 weaklyHypometh 0.4162 insignificant 0.84794 0.838362 0.027114 5 0.829808 0.802591 0.027217 2.7292e-01 0.59092 insignificant 1.0000e+00 1 insignificant 2.4246e-01 0.67751 insignificant 1.0000e+00 1 insignificant -0.025904 6.0937e-01 lowCoverage 1.0000e+00 lowCoverage 0.84794 0.923375 -0.0615560 6 0.82981 0.929987 -0.100180 9.9995e-01 0.0012684 weaklyHypometh 1.0000000 0.42279 insignificant 9.9879e-01 0.0082753 weaklyHypometh 1.0000e+00 1 insignificant -0.11121088 0.00628202 lowCoverage 1.00000 lowCoverage 0.838362 0.923375 -0.082288 5 0.802591 0.929987 -0.127397 0.99999 2.8680e-05 weaklyHypometh 1 2.8680e-03 weaklyHypometh 0.99848 1.1574e-02 weaklyHypometh 1 0.68082959 insignificant -0.085307 6.8612e-02 insignificant 1.0000e+00 insignificant chr9 121958148 121959148 97078 ENSG00000222745 0.93736 91 2 0.83754 86 4 0.67619 34 3 0.93313 105 3 0.98095 49 4 0.82466 189 6 0.88600 88 6 0.89195 47 3 0.91837 34 3 0.87667 21 2 0.93767 143 5 1.00000 18 0 0.785816 76 4 0.80000 5 1 0.80556 24 2 0.75000 4 0 0.80000 7 1 0.84559 107 1 0.95588 33 3 0.968125 112 4 0.88684 29 1 0.833333 12 2 0.86458 32 2 0.84416 48 4 0.91159 52 1 0.91352 89 5 0.62778 22 2 0.96296 12 1 0.86667 30 3 0.951603 84 5 0.967972 244 7 0.91853 168 7 0.4876218 77 4 0.3784690 59 4 0.9090909 57 3 0.664179 72 2 0.530392 103 5 0.674643 171 7 0.515055 118 4 0.573795 105 5 0.651675 106 3 0.234234 39 1 0.829355 113 6 0.85520 0.77113 0.61765 0.94047 0.96078 0.81687 0.82751 0.75592 0.90056 0.94118 0.82680 1.00000 0.858824 0.82014 0.85294 1.000000 0.90018 0.79931 0.875433 0.908898 0.77709 0.737632 0.85294 0.43583 0.92327 0.92262 0.84804 0.88659 0.62353 0.873303 0.878746 0.84874 0.2848297 0.3831667 0.5608439 0.4000988 0.4923947 0.488923 0.585701 0.465920 0.788671 0.496025 0.601638 0 0.86174 0.87820 -0.00637535 4 0.88863 0.91809 -0.02945604 0.8803375 0.3176443 lowCoverage 1 1.00000 lowCoverage 0.413422 0.7583737 lowCoverage 1 1 lowCoverage -0.00855476 0.7946607 lowCoverage 1 lowCoverage 0.86174 0.5454545 0.351151 4 0.88863 0.5698738 0.3187600 1.3731e-17 9.9999e-01 lowCoverage 4.4294e-16 1.0000e+00 lowCoverage 2.1409e-07 9.9999e-01 lowCoverage 6.9061e-06 1.00000000 lowCoverage 0.26317355 1.6371e-02 lowCoverage 2.4804e-01 lowCoverage 0.86174 0.648649 0.2148372 3 0.88863 0.603048 0.2855862 5.1276e-15 0.999786 lowCoverage 4.6614e-13 1 lowCoverage 2.4690e-07 0.999999 lowCoverage 1.6460e-05 1 lowCoverage 0.30974998 3.1922e-02 lowCoverage 7.1944e-01 lowCoverage 0.87820 0.5454545 0.33909843 5 0.91809 0.5698738 0.34821600 7.8967e-12 1.0000e+00 hypermethylated 2.1343e-10 1.0000e+00 hypermethylated 2.8460e-05 9.9978e-01 hypermethylated 6.6185e-04 1.0000000 hypermethylated 0.271728 1.3732e-02 lowCoverage 2.1796e-01 lowCoverage 0.87820 0.648649 2.0159e-01 4 0.91809 0.603048 0.31504220 1.5995e-09 0.999977 lowCoverage 9.9972e-08 1 lowCoverage 2.4646e-04 0.999999 lowCoverage 1.0924e-02 1 lowCoverage 0.3183047 2.8237e-02 lowCoverage 0.67230395 lowCoverage 0.5454545 0.648649 -0.1490585 4 0.5698738 0.60305 -0.0331738 3.1100e-01 7.7191e-02 lowCoverage 1.00000000 7.8766e-01 lowCoverage 6.1491e-01 1.0068e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 4.6576e-02 7.1527e-01 lowCoverage 1.00000000 lowCoverage chr9 122503149 122504149 97137 CDK5RAP2 ENSG00000136861 0.67896 65 3 0.72857 60 5 0.58101 48 5 0.62963 23 3 0.84571 35 5 0.75201 216 5 0.53333 45 3 0.73111 51 5 0.75143 40 5 0.84500 51 5 0.73949 113 5 0.68333 47 5 0.797932 80 5 NA 0 0 0.76809 60 5 0.66667 22 3 0.61111 34 3 0.73462 43 3 0.83492 62 5 0.802244 310 5 0.81818 39 3 0.725000 38 3 0.63808 61 3 0.86667 39 3 0.47619 22 3 0.80083 82 5 0.82167 56 3 0.58547 25 3 0.80452 71 5 0.760476 96 5 0.711905 111 5 0.77879 216 5 0.7624542 63 5 0.7555556 54 5 0.7866667 45 5 0.634965 39 3 0.481429 60 3 0.700855 76 5 0.573053 296 3 0.768889 66 5 0.727273 33 3 0.691667 46 3 0.658647 70 3 0.50168 0.69042 0.50627 0.65271 0.82759 0.77746 0.68966 0.60757 0.65517 0.75194 0.69584 0.49641 0.738106 NA 0.68750 0.795977 0.59100 0.79200 0.782020 0.691324 0.72257 0.738578 0.67193 0.79598 0.52094 0.69127 0.70941 0.61096 0.80908 0.682553 0.661433 0.75823 0.7018757 0.8915230 0.7974138 0.7412587 0.6019089 0.616269 0.646456 0.701724 0.751567 0.708405 0.680840 3 0.71815 0.74299 -0.01814459 5 0.75013 0.77091 -0.02078062 0.7745872 0.2284799 insignificant 1 1.00000 insignificant 0.964883 0.1870180 insignificant 1 1 insignificant -0.01046419 0.7897812 lowCoverage 1 lowCoverage 0.71815 0.7210682 0.006993 5 0.75013 0.7273077 0.0228189 2.8659e-01 7.6607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0080e-01 7.0808e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03486343 5.1605e-01 lowCoverage 1.0000e+00 lowCoverage 0.71815 0.681018 0.0244974 3 0.75013 0.706164 0.0439626 3.1193e-01 0.720764 lowCoverage 1.0000e+00 1 lowCoverage 4.7810e-01 0.628312 lowCoverage 1.0000e+00 1 lowCoverage 0.03794527 3.6153e-01 lowCoverage 1.0000e+00 lowCoverage 0.74299 0.7210682 0.02741087 5 0.77091 0.7273077 0.04359949 1.5866e-01 9.3045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1358e-02 8.7213e-01 insignificant 6.4228e-01 1.0000000 insignificant 0.045328 4.4589e-01 lowCoverage 1.0000e+00 lowCoverage 0.74299 0.681018 4.3131e-02 3 0.77091 0.706164 0.06474319 9.8536e-02 0.593618 lowCoverage 1.0000e+00 1 lowCoverage 2.6122e-01 0.902189 lowCoverage 1.0000e+00 1 lowCoverage 0.0484095 3.2157e-01 lowCoverage 1.00000000 lowCoverage 0.7210682 0.681018 0.0292969 3 0.7273077 0.70616 0.0211437 5.4103e-01 3.8213e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 7.2973e-01 7.9559e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 3.0818e-03 9.5836e-01 lowCoverage 1.00000000 lowCoverage chr9 123409699 123410699 97158 DAB2IP ENSG00000136848 0.75141 183 5 0.76533 178 5 0.62683 214 5 0.87706 95 2 0.67000 27 1 0.75143 128 5 0.80741 42 2 0.65909 43 2 0.65278 48 2 0.66667 32 2 0.84219 104 2 0.39706 31 2 0.722617 63 2 NA 0 0 0.61818 48 2 0.59286 19 2 0.50000 26 2 0.58680 172 4 0.86111 36 2 0.758016 136 5 0.70962 33 2 0.359601 70 2 0.70923 89 5 0.68571 31 2 0.85000 25 2 0.74680 216 5 0.87390 43 2 0.90625 34 2 0.82887 62 2 0.757620 202 5 0.752746 291 5 0.90117 121 5 0.3451017 191 5 0.0227273 48 2 0.4625000 116 5 0.229167 28 2 0.558182 36 2 0.578523 226 5 0.330873 129 4 0.328369 175 4 0.391149 136 2 0.263727 185 5 0.309615 119 2 0.85354 0.80384 0.64763 0.69993 0.69902 0.68841 0.80867 0.63193 0.66463 0.68089 0.83752 0.37948 0.704695 NA 0.62129 0.625784 0.50657 0.53642 0.865854 0.681185 0.71979 0.342745 0.70962 0.66620 0.85854 0.72739 0.85949 0.89024 0.81185 0.744715 0.761973 0.81336 0.3091562 0.0266075 0.5853659 0.2540650 0.5448337 0.603949 0.213630 0.138571 0.156725 0.168060 0.285499 2 0.70338 0.74610 -0.03656154 4 0.69112 0.75558 -0.06446154 0.9935160 0.0136524 lowCoverage 1 0.90253 lowCoverage 0.991835 0.0586797 lowCoverage 1 1 lowCoverage -0.06696012 0.2042493 lowCoverage 1 lowCoverage 0.70338 0.4837209 0.210095 4 0.69112 0.4564821 0.2346362 3.8404e-09 9.9989e-01 lowCoverage 6.1942e-08 1.0000e+00 lowCoverage 1.2127e-05 1.0000e+00 lowCoverage 2.6948e-04 1.00000000 lowCoverage 0.32379950 1.2070e-02 lowCoverage 2.0634e-01 lowCoverage 0.70338 0.215054 0.4812483 2 0.69112 0.288557 0.4025613 1.9110e-17 1.000000 lowCoverage 2.3887e-15 1 lowCoverage 1.1976e-07 1.000000 lowCoverage 8.5540e-06 1 lowCoverage 0.36508640 3.0994e-09 lowCoverage 3.0994e-06 lowCoverage 0.74610 0.4837209 0.26208462 5 0.75558 0.4564821 0.29909777 9.4176e-10 9.9986e-01 hypermethylated 2.0037e-08 1.0000e+00 hypermethylated 4.0481e-05 9.9999e-01 hypermethylated 9.2002e-04 1.0000000 hypermethylated 0.390760 4.3975e-03 lowCoverage 9.1614e-02 lowCoverage 0.74610 0.215054 5.2007e-01 2 0.75558 0.288557 0.46702281 9.1409e-15 1.000000 lowCoverage 1.0157e-12 1 lowCoverage 1.9817e-07 1.000000 lowCoverage 2.8310e-05 1 lowCoverage 0.4320465 2.0070e-07 lowCoverage 0.00020070 lowCoverage 0.4837209 0.215054 0.2671227 2 0.4564821 0.28856 0.1679250 2.7109e-02 9.9263e-01 lowCoverage 0.96819150 1.0000e+00 lowCoverage 1.7890e-01 9.2675e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 4.1287e-02 6.6258e-01 lowCoverage 1.00000000 lowCoverage chr9 123659472 123660472 97172 DAB2IP ENSG00000136848 0.88667 48 5 0.83904 158 5 0.63399 187 5 0.90000 8 0 0.86408 141 5 0.98182 45 5 0.90882 294 5 0.77500 111 5 0.85495 136 5 0.92766 176 5 0.91423 235 5 0.84651 191 5 0.850542 159 5 NA 0 0 0.88558 126 5 0.92590 256 5 0.89250 250 5 0.30000 12 0 0.88420 189 5 0.851429 30 5 0.92778 43 4 0.333333 3 0 0.85132 94 5 1.00000 21 3 1.00000 4 0 0.90827 197 5 0.87778 35 5 0.90833 35 5 0.93520 118 4 0.905924 206 5 0.809573 207 5 0.91919 73 5 0.7657074 124 5 0.7960940 146 5 0.8480000 95 5 0.625000 8 0 0.973913 96 5 0.398226 165 5 0.450000 28 3 0.557778 33 4 0.833333 12 0 0.800000 24 3 0.760000 23 4 0.91085 0.82429 0.64531 0.87209 0.85585 0.97674 0.91179 0.81096 0.85875 0.92370 0.91661 0.86318 0.883583 NA 0.87989 0.930339 0.89894 0.31395 0.887982 0.837874 0.94251 0.596533 0.85242 1.00000 0.98283 0.91449 0.89018 0.92926 0.92943 0.918968 0.846353 0.92201 0.8212536 0.8524218 0.8055814 0.6542243 0.9666330 0.484735 0.540698 0.587855 0.796027 0.813953 0.832558 0 0.86955 0.90251 -0.03449388 5 0.86695 0.89169 -0.02474058 0.9316380 0.0461012 weaklyHypometh 1 1.00000 insignificant 0.981748 0.0115798 weaklyHypometh 1 1 insignificant -0.02667754 0.6670286 lowCoverage 1 lowCoverage 0.86955 0.7555205 0.113491 5 0.86695 0.7270292 0.1399247 5.2492e-04 9.1988e-01 weaklyHypermeth 5.5255e-03 1.0000e+00 weaklyHypermeth 2.4550e-01 4.5029e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.10355832 2.8104e-01 lowCoverage 1.0000e+00 lowCoverage 0.86955 0.683333 0.1883533 3 0.86695 0.630288 0.2366658 4.4885e-09 0.999808 lowCoverage 2.0402e-07 1 lowCoverage 5.5555e-03 0.921329 lowCoverage 1.1820e-01 1 lowCoverage 0.15782615 1.0541e-01 lowCoverage 1.0000e+00 lowCoverage 0.90251 0.7555205 0.14693354 5 0.89169 0.7270292 0.16466526 9.8083e-04 9.9496e-01 weaklyHypermeth 1.0661e-02 1.0000e+00 weaklyHypermeth 3.9207e-02 9.2496e-01 weaklyHypermeth 3.9207e-01 1.0000000 insignificant 0.130236 2.0855e-01 lowCoverage 1.0000e+00 lowCoverage 0.90251 0.683333 2.1771e-01 3 0.89169 0.630288 0.26140639 8.5678e-09 0.999902 lowCoverage 4.7599e-07 1 lowCoverage 3.1757e-04 0.993799 lowCoverage 1.2703e-02 1 lowCoverage 0.1845037 7.6101e-02 lowCoverage 1.00000000 lowCoverage 0.7555205 0.683333 0.0709075 3 0.7270292 0.63029 0.0967411 2.4624e-01 8.8025e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 4.6260e-01 9.0801e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 5.4268e-02 6.3600e-01 lowCoverage 1.00000000 lowCoverage chr9 125240083 125241083 97272 MIR601 ENSG00000207991 0.87845 195 4 0.46543 160 5 0.68218 125 5 0.77266 51 4 0.74151 90 4 0.78509 199 5 0.70323 122 5 0.74347 84 5 0.60214 122 5 0.83812 74 4 0.84404 159 5 0.66918 98 4 0.418271 131 4 0.50000 4 0 0.60921 93 5 0.81368 70 4 0.67388 75 4 0.57727 99 4 0.73414 117 4 0.651891 190 5 0.64795 61 4 0.550392 39 3 0.77502 159 4 0.68168 106 5 0.86667 28 3 0.54844 182 5 0.62379 79 5 0.76083 57 5 0.77250 97 4 0.492659 209 5 0.618296 220 5 0.86466 305 5 0.9171429 123 5 0.8692359 79 4 0.9062500 140 5 0.855769 34 2 0.876000 77 5 0.659524 129 5 0.337004 131 4 0.533974 168 4 0.571091 72 5 0.589326 157 4 0.541667 71 4 0.85905 0.58044 0.82459 0.79917 0.82653 0.84053 0.79897 0.77260 0.74810 0.87397 0.84202 0.86734 0.477060 0.68836 0.68432 0.870146 0.66158 0.68364 0.690330 0.782908 0.75652 0.515521 0.85002 0.80080 0.75951 0.67062 0.67659 0.86142 0.86573 0.581656 0.690039 0.88452 0.9212655 0.8922219 0.9892979 0.9038489 0.9469406 0.647576 0.288648 0.642480 0.671939 0.663583 0.637481 4 0.74535 0.72309 0.01634590 5 0.69322 0.67409 0.01913657 0.0692739 0.7138293 insignificant 1 1.00000 insignificant 0.217711 0.7453697 insignificant 1 1 insignificant 0.00161701 0.9721596 lowCoverage 1 lowCoverage 0.74535 0.8419244 -0.114347 5 0.69322 0.8222999 -0.1290752 9.9821e-01 4.1702e-07 weaklyHypometh 1.0000e+00 6.9503e-05 weaklyHypometh 9.9996e-01 4.1475e-07 weaklyHypometh 1.0000e+00 0.00020738 weaklyHypometh -0.16212849 6.2098e-03 lowCoverage 1.2176e-01 lowCoverage 0.74535 0.629382 0.1512588 4 0.69322 0.496880 0.1963449 7.3881e-05 0.999766 lowCoverage 1.7182e-03 1 lowCoverage 7.4806e-04 0.997602 lowCoverage 2.0779e-02 1 lowCoverage 0.17057952 1.4184e-02 lowCoverage 4.1718e-01 lowCoverage 0.72309 0.8419244 -0.12385932 5 0.67409 0.8222999 -0.14821182 9.9768e-01 1.1167e-07 weaklyHypometh 1.0000e+00 3.7224e-05 weaklyHypometh 9.9971e-01 2.2526e-05 weaklyHypometh 1.0000e+00 0.0056315 weaklyHypometh -0.163746 8.4709e-03 lowCoverage 1.5402e-01 lowCoverage 0.72309 0.629382 1.3178e-01 4 0.67409 0.496880 0.17720830 9.0277e-05 0.931002 lowCoverage 2.5077e-03 1 lowCoverage 6.2236e-04 0.915014 lowCoverage 2.0076e-02 1 lowCoverage 0.1689625 1.6738e-02 lowCoverage 0.46495194 lowCoverage 0.8419244 0.629382 0.2898050 4 0.8222999 0.49688 0.3254201 8.5378e-07 1.0000e+00 lowCoverage 0.00014624 1.0000e+00 lowCoverage 2.8029e-06 1.0000e+00 lowCoverage 0.0028029 1.0000e+00 lowCoverage 3.3271e-01 4.5025e-04 lowCoverage 0.02814076 lowCoverage chr9 125388038 125389038 97310 ENSG00000222722 0.87473 73 5 0.82900 51 5 0.92271 51 5 0.94583 77 5 0.65634 52 5 0.94966 166 5 0.72222 40 4 0.86856 84 5 0.72942 83 5 0.79302 73 5 0.92761 82 5 0.56667 24 1 0.771369 85 5 0.79206 38 2 0.70713 92 5 0.96947 96 5 0.58750 32 3 0.81697 108 5 0.90722 95 5 0.858204 108 5 0.47500 24 2 0.713558 60 4 0.77847 78 5 0.70993 86 5 0.98750 40 4 0.74575 77 5 0.61006 65 4 0.61667 42 2 0.67720 63 5 0.778056 58 5 0.931155 91 5 0.94050 115 5 0.8578947 46 5 0.9000000 20 1 1.0000000 21 1 1.000000 14 1 0.720551 79 6 0.917749 62 5 0.899062 82 5 0.887928 75 5 0.968571 72 5 0.904861 64 5 0.818750 106 5 0.92769 0.78580 0.91685 0.98769 0.84481 0.89785 0.91538 0.84272 0.85366 0.94225 0.91558 0.73718 0.928022 0.95927 0.90105 0.976599 0.73538 0.98285 0.893996 0.972133 0.69846 0.874371 0.94200 0.90027 0.96875 0.81210 0.82622 0.77821 0.83899 0.950513 0.941774 0.89235 0.8178138 0.9153846 NA 1.0000000 0.8680644 0.927239 0.886333 0.920162 0.959121 0.937366 0.926084 1 0.90374 0.85106 0.03756118 5 0.77030 0.73163 0.03866425 0.0946835 0.9353195 insignificant 1 1.00000 insignificant 0.537900 0.7239483 insignificant 1 1 insignificant 0.06279823 0.2319250 lowCoverage 1 lowCoverage 0.90374 0.8760331 0.013878 4 0.77030 0.7474589 0.0228368 2.6080e-01 5.9066e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4859e-01 1.5609e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.08958079 1.0676e-01 lowCoverage 9.7946e-01 lowCoverage 0.90897 0.922306 -0.0097289 5 0.83498 0.867329 -0.0323500 7.3244e-01 0.516285 insignificant 1.0000e+00 1 insignificant 8.6513e-01 0.616842 insignificant 1.0000e+00 1 insignificant -0.08604937 2.9192e-02 lowCoverage 7.0548e-01 lowCoverage 0.85106 0.8760331 -0.01869494 4 0.73163 0.7474589 -0.01582746 7.5777e-01 2.4311e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3781e-01 1.3084e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.152379 2.5111e-02 lowCoverage 3.2528e-01 lowCoverage 0.86940 0.925641 -4.0720e-02 5 0.86685 0.904260 -0.03741363 8.2435e-01 0.250544 insignificant 1.0000e+00 1 insignificant 8.0715e-01 0.454867 insignificant 1.0000e+00 1 insignificant -0.1488476 8.8899e-03 lowCoverage 0.41125429 lowCoverage 0.8983051 0.925641 -0.0237136 4 0.8969507 0.90426 -0.0073096 2.4059e-01 3.1148e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 1.7257e-01 7.7875e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 3.5314e-03 9.4413e-01 lowCoverage 1.00000000 lowCoverage chr9 125927361 125928361 97436 ENSG00000208719 0.53582 309 9 0.53186 290 11 0.56584 229 11 0.51404 207 9 0.41518 190 11 0.52263 364 9 0.53700 277 11 0.40188 251 11 0.46662 309 11 0.45258 184 11 0.62625 490 11 0.62651 175 10 0.177942 396 10 0.41987 45 3 0.28479 319 11 0.66008 126 10 0.36023 208 8 0.37884 266 8 0.25438 316 10 0.235108 308 9 0.60644 161 11 0.360502 119 5 0.45643 276 10 0.58265 168 13 0.42969 88 6 0.25729 510 11 0.53336 174 10 0.49141 122 11 0.28783 201 10 0.195169 476 11 0.273549 664 11 0.73372 415 10 0.3639911 331 11 0.4215680 246 11 0.5033108 441 11 0.168651 82 6 0.451115 222 10 0.246353 310 11 0.111455 355 9 0.231730 402 11 0.136364 276 9 0.492347 257 8 0.153171 349 9 0.41600 0.49305 0.57096 0.42507 0.39760 0.48931 0.55487 0.38247 0.43684 0.51203 0.62010 0.66299 0.203179 0.42556 0.25930 0.665664 0.39566 0.35468 0.249185 0.268737 0.65354 0.249452 0.46332 0.57369 0.40726 0.23983 0.52096 0.45819 0.33109 0.197327 0.269347 0.72414 0.3111834 0.4689465 0.4237718 0.1927624 0.4197653 0.260659 0.068112 0.244947 0.139485 0.341720 0.137846 8 0.41947 0.37137 0.05179308 11 0.45052 0.38626 0.06426062 0.0457055 0.9987426 weaklyHypermeth 1 1.00000 insignificant 0.479258 0.8656153 insignificant 1 1 insignificant 0.01436949 0.8013358 insignificant 1 insignificant 0.41933 0.3486520 0.063390 11 0.44152 0.3779133 0.0636102 6.1970e-06 2.2216e-01 weaklyHypermeth 7.9449e-05 1.0000e+00 weaklyHypermeth 6.8476e-06 7.1265e-01 weaklyHypermeth 1.6304e-04 1.00000000 weaklyHypermeth 0.08920758 1.7611e-01 insignificant 1.0000e+00 insignificant 0.41933 0.172056 0.2536575 9 0.44152 0.190743 0.2507808 1.2683e-15 1.000000 hypermethylated 1.2683e-13 1 hypermethylated 6.1245e-12 1.000000 hypermethylated 3.0622e-09 1 hypermethylated 0.22335902 2.8234e-02 weaklyHypermeth 7.0548e-01 insignificant 0.37072 0.3486520 0.01599639 11 0.37694 0.3779133 -0.00097053 1.0293e-01 1.8767e-01 insignificant 7.9790e-01 1.0000e+00 insignificant 7.5735e-04 8.9896e-01 weaklyHypermeth 1.4025e-02 1.0000000 weaklyHypermeth 0.074838 3.0882e-01 insignificant 1.0000e+00 insignificant 0.37072 0.172056 2.1271e-01 9 0.37694 0.190743 0.18620005 5.9863e-07 1.000000 hypermethylated 2.7211e-05 1 hypermethylated 2.6739e-08 1.000000 hypermethylated 6.6847e-06 1 hypermethylated 0.2089895 3.8532e-02 weaklyHypermeth 0.78635818 insignificant 0.3486520 0.172056 0.1863159 9 0.3779133 0.19074 0.1871706 8.5393e-05 9.8797e-01 weaklyHypermeth 0.00649177 1.0000e+00 weaklyHypermeth 2.9235e-03 9.5686e-01 weaklyHypermeth 0.2436220 1.0000e+00 insignificant 1.3415e-01 1.6366e-01 insignificant 1.00000000 insignificant chr9 126298173 126299173 97461 GPR144 ENSG00000180264 0.81890 496 11 0.83047 428 11 0.73880 462 11 0.88780 369 9 0.84138 185 10 0.89519 571 11 0.89494 369 11 0.79865 308 11 0.84398 321 11 0.89852 335 11 0.89756 492 11 0.83722 241 8 0.867380 375 11 0.95395 63 3 0.85121 344 11 0.81663 151 5 0.75308 197 6 0.77021 514 9 0.90230 426 11 0.898250 545 11 0.90603 239 11 0.724411 110 5 0.87320 484 11 0.70344 186 11 0.92322 72 7 0.90001 464 11 0.88520 261 11 0.91117 171 9 0.80179 404 11 0.897843 548 11 0.846816 665 11 0.93660 585 11 0.3550562 440 11 0.4568869 394 11 0.3835056 294 7 0.322896 67 7 0.560488 265 11 0.418986 635 11 0.705130 439 11 0.650654 499 11 0.688559 334 10 0.607429 610 11 0.775192 389 11 0.88665 0.81785 0.70995 0.86962 0.82275 0.89034 0.86009 0.78458 0.82966 0.89779 0.89272 0.79500 0.828949 0.83836 0.82293 0.738135 0.79852 0.73671 0.868148 0.877812 0.85946 0.647501 0.85193 0.79639 0.87577 0.88112 0.90322 0.91899 0.76806 0.852006 0.793636 0.93612 0.3522470 0.5079622 0.4152420 0.2262035 0.5702405 0.349349 0.616582 0.624785 0.575916 0.493806 0.653426 5 0.84246 0.86536 -0.02057326 11 0.84736 0.79515 0.05221035 0.9923489 0.0373673 weaklyHypometh 1 1.00000 insignificant 0.989219 0.0751483 insignificant 1 1 insignificant -0.00932276 0.7186297 insignificant 1 insignificant 0.84252 0.4138425 0.414256 11 0.85119 0.4373927 0.4137956 1.0222e-61 1.0000e+00 hypermethylated 2.0444e-59 1.0000e+00 hypermethylated 9.0066e-22 1.0000e+00 hypermethylated 2.2517e-19 1.00000000 hypermethylated 0.43351806 1.4786e-05 hypermethylated 6.7210e-04 hypermethylated 0.84242 0.567591 0.2382403 11 0.82192 0.631252 0.1906709 1.7128e-22 0.998487 hypermethylated 5.7092e-20 1 hypermethylated 2.0465e-11 0.999383 hypermethylated 5.1162e-09 1 hypermethylated 0.16442845 2.0390e-03 weaklyHypermeth 1.1328e-01 insignificant 0.86585 0.4138425 0.43926882 11 0.87565 0.4373927 0.43825518 1.1125e-45 1.0000e+00 hypermethylated 2.2251e-43 1.0000e+00 hypermethylated 1.6062e-19 1.0000e+00 hypermethylated 5.3541e-17 1.0000000 hypermethylated 0.442841 1.5659e-06 hypermethylated 9.7871e-05 hypermethylated 0.86565 0.567591 2.3880e-01 11 0.80268 0.631252 0.17142554 1.9526e-17 1.000000 hypermethylated 4.8816e-15 1 hypermethylated 4.3117e-10 1.000000 hypermethylated 2.1558e-07 1 hypermethylated 0.1737512 8.3156e-04 weaklyHypermeth 0.08315612 weaklyHypermeth 0.4138425 0.567841 -0.2350575 11 0.4373927 0.68864 -0.2512455 9.9992e-01 1.1849e-13 hypomethylated 1.00000000 9.1150e-12 hypomethylated 9.9998e-01 1.2007e-07 hypomethylated 1.0000000 1.5009e-05 hypomethylated -2.6909e-01 2.0120e-04 hypomethylated 0.01708548 hypomethylated chr9 126435366 126436366 97481 ENSG00000208712,ENSG00000223143 0.84773 221 6 0.66230 67 6 0.84091 45 3 0.91759 115 6 0.77381 32 3 0.78963 155 6 0.70223 95 6 0.81863 48 3 0.80839 99 6 0.84785 78 6 0.79595 113 6 0.86296 44 6 0.794851 88 6 NA 0 0 0.91026 81 6 0.90152 38 3 0.75926 41 5 0.77640 81 6 0.86742 94 6 0.873139 201 6 0.87500 29 3 0.808333 41 6 0.84684 121 6 0.65556 20 2 0.88889 33 3 0.80888 119 6 0.80119 66 6 0.74000 34 3 0.70686 51 5 0.703283 123 6 0.760317 76 6 0.78701 203 6 0.7359127 67 6 0.8224537 75 6 0.6994949 98 6 0.796465 50 6 0.696678 46 3 0.817233 105 6 0.885662 263 6 0.833573 209 6 0.865481 193 6 0.835779 187 6 0.871360 178 6 0.87732 0.71016 0.84689 0.95654 0.64098 0.77581 0.73558 0.81349 0.84389 0.88194 0.83489 0.89942 0.882696 NA 0.94838 0.843900 0.88012 0.79639 0.897129 0.839716 0.90049 0.853289 0.86557 0.78070 0.82456 0.86347 0.77749 0.83709 0.82887 0.726201 0.876049 0.78144 0.6920818 0.8258863 0.6923844 0.8282496 0.6685913 0.776361 0.871911 0.859698 0.886660 0.856003 0.882646 3 0.82604 0.80240 0.02424907 6 0.81455 0.78695 0.02759695 0.2257104 0.9414637 insignificant 1 1.00000 insignificant 0.321169 0.6856201 insignificant 1 1 insignificant 0.03661760 0.1692799 lowCoverage 1 lowCoverage 0.82604 0.7482993 0.082575 6 0.81455 0.7548010 0.0597503 1.3614e-03 9.1375e-01 weaklyHypermeth 1.3480e-02 1.0000e+00 weaklyHypermeth 1.2589e-02 8.5793e-01 weaklyHypermeth 1.3988e-01 1.00000000 insignificant 0.05709109 7.1641e-02 insignificant 7.2364e-01 insignificant 0.82604 0.856311 -0.0375896 6 0.81455 0.856060 -0.0415088 9.9076e-01 0.070035 insignificant 1.0000e+00 1 insignificant 9.9351e-01 0.092809 insignificant 1.0000e+00 1 insignificant -0.03990697 4.3811e-02 weaklyHypometh 8.4418e-01 insignificant 0.80240 0.7482993 0.05837253 6 0.78695 0.7548010 0.03215334 2.2671e-02 7.4534e-01 weaklyHypermeth 1.9544e-01 1.0000e+00 insignificant 2.4210e-02 7.0719e-01 weaklyHypermeth 2.5755e-01 1.0000000 insignificant 0.020473 5.2591e-01 lowCoverage 1.0000e+00 lowCoverage 0.80240 0.856311 -6.1293e-02 6 0.78695 0.856060 -0.06910578 9.9793e-01 0.026286 weaklyHypometh 1.0000e+00 1 insignificant 9.6188e-01 0.160837 insignificant 1.0000e+00 1 insignificant -0.0765246 4.7547e-03 lowCoverage 0.36890111 lowCoverage 0.7482993 0.856311 -0.1173375 6 0.7548010 0.85606 -0.1012591 9.9977e-01 3.2887e-04 weaklyHypometh 1.00000000 6.4485e-03 weaklyHypometh 9.9045e-01 3.0294e-03 weaklyHypometh 1.0000000 6.7320e-02 weaklyHypometh -9.6998e-02 7.4835e-03 weaklyHypometh 0.16268553 insignificant chr9 126622575 126623575 97497 OLFML2A ENSG00000185585 0.95420 119 6 0.72160 158 7 0.82141 162 7 0.84988 156 6 0.73013 93 7 0.81409 221 7 0.57636 90 7 0.87182 244 7 0.87125 129 7 0.84802 113 7 0.86484 241 7 0.73958 34 4 0.867929 198 7 0.95364 94 5 0.86805 160 7 0.88333 36 4 0.43006 20 2 0.75534 116 5 0.88443 227 8 0.852450 159 6 0.88095 55 6 0.712367 90 5 0.86904 176 8 0.64337 74 3 0.90317 60 5 0.86106 277 8 0.72311 129 6 0.92720 51 5 0.80744 139 7 0.850436 265 8 0.825492 260 8 0.89922 219 7 0.3315125 179 7 0.3306535 94 6 0.5942289 298 6 0.648148 107 5 0.408426 138 7 0.666454 187 8 0.622841 138 6 0.787037 108 7 0.867470 82 4 0.822222 109 5 0.788811 162 5 0.91372 0.76848 0.82551 0.89155 0.85163 0.89834 0.71917 0.87059 0.87166 0.89332 0.84701 0.80507 0.875400 0.92968 0.86479 0.883604 0.71528 0.75187 0.919288 0.883544 0.97563 0.687639 0.91526 0.57541 0.90289 0.88875 0.81174 0.90013 0.84587 0.895559 0.843605 0.88308 0.3958704 0.4239977 0.5334362 0.5611829 0.5097212 0.811621 0.716502 0.878411 0.801238 0.913645 0.781893 4 0.85343 0.85746 -0.00069714 7 0.84372 0.83983 0.00388431 0.4774284 0.8118866 insignificant 1 1.00000 insignificant 0.604377 0.8715564 insignificant 1 1 insignificant -0.01731924 0.6498285 insignificant 1 insignificant 0.85338 0.5712861 0.307250 7 0.82635 0.4711654 0.3551850 6.6775e-25 9.9990e-01 hypermethylated 3.9279e-23 1.0000e+00 hypermethylated 1.0932e-08 9.9977e-01 hypermethylated 5.7537e-07 1.00000000 hypermethylated 0.31134973 2.9979e-03 weaklyHypermeth 6.8133e-02 weaklyHypermeth 0.85338 0.844741 0.0380456 5 0.82635 0.770994 0.0553560 2.3241e-03 0.670478 weaklyHypermeth 4.2256e-02 1 weaklyHypermeth 2.9983e-01 0.537579 insignificant 1.0000e+00 1 insignificant 0.03024413 5.6100e-01 insignificant 1.0000e+00 insignificant 0.85738 0.5712861 0.29340821 7 0.82203 0.4711654 0.35086914 1.4080e-16 1.0000e+00 hypermethylated 5.2150e-15 1.0000e+00 hypermethylated 1.8574e-07 9.9975e-01 hypermethylated 8.4428e-06 1.0000000 hypermethylated 0.328669 2.4151e-03 weaklyHypermeth 5.7503e-02 weaklyHypermeth 0.85738 0.844741 3.8515e-02 5 0.82203 0.770994 0.05104012 3.2355e-02 0.843895 weaklyHypermeth 4.4938e-01 1 insignificant 2.5758e-01 0.646125 insignificant 1.0000e+00 1 insignificant 0.0475634 3.5909e-01 insignificant 1.00000000 insignificant 0.5712861 0.844741 -0.2168685 6 0.4711654 0.77099 -0.2998290 1.0000e+00 2.0828e-05 hypomethylated 1.00000000 5.3404e-04 hypomethylated 1.0000e+00 8.2162e-04 hypomethylated 1.0000000 2.3475e-02 hypomethylated -2.8111e-01 5.9338e-03 weaklyHypometh 0.13799615 insignificant chr9 127858611 127859611 97680 PBX3 ENSG00000167081 0.93026 120 5 0.77468 268 5 0.77778 42 5 0.86741 221 4 0.76000 25 5 0.94448 125 5 0.87778 33 5 0.72872 114 5 0.97500 24 1 1.00000 18 0 0.87791 354 5 1.00000 9 0 0.941667 38 5 0.96000 44 4 0.87500 34 5 NA 0 0 NA 0 0 0.87932 70 4 0.74286 28 4 0.908649 79 5 0.95556 40 5 0.871429 30 4 0.95000 24 2 0.65278 33 5 0.91376 122 4 0.95706 304 5 0.90182 42 4 0.88889 9 1 1.00000 35 4 0.936237 255 5 0.929063 332 5 0.84026 137 5 0.7522589 177 5 0.8684211 78 4 0.7985507 537 4 NA 0 0 0.880034 135 5 0.628554 260 5 0.914773 132 4 0.922500 230 4 0.967669 349 4 1.000000 5 0 0.834226 230 4 0.92786 0.93211 0.93103 0.87433 0.75862 0.94257 0.87739 0.87703 0.97845 1.00000 0.87914 1.00000 0.945402 0.95862 0.97845 NA NA 0.87516 0.768473 0.910607 0.95402 0.884236 0.94828 0.78448 0.91079 0.95824 0.89843 NA 0.97814 0.925157 0.932886 0.83993 0.7743674 0.8811252 0.8260870 NA 0.8865073 0.645917 0.911834 0.919828 0.966554 1.000000 0.837130 0 0.91275 0.92873 -0.01437057 5 0.91008 0.92068 -0.01060039 0.9146309 0.2939741 insignificant 1 1.00000 insignificant 0.393994 0.4627029 insignificant 1 1 insignificant -0.02076555 0.5360365 lowCoverage 1 lowCoverage 0.91275 0.8997473 0.044000 5 0.91008 0.7999103 0.1101715 9.9939e-05 1.4189e-01 weaklyHypermeth 1.1229e-03 1.0000e+00 weaklyHypermeth 1.3170e-02 8.9153e-01 weaklyHypermeth 1.4472e-01 1.00000000 insignificant 0.09340911 1.1401e-01 lowCoverage 1.0000e+00 lowCoverage 0.91275 0.911205 0.0029314 4 0.91008 0.914710 -0.0046281 5.7645e-01 0.610264 lowCoverage 1.0000e+00 1 lowCoverage 2.8392e-01 0.636112 lowCoverage 1.0000e+00 1 lowCoverage -0.04886089 1.9594e-01 lowCoverage 1.0000e+00 lowCoverage 0.92873 0.8997473 0.04529068 5 0.92068 0.7999103 0.12077185 2.0266e-03 4.8583e-01 weaklyHypermeth 2.0893e-02 1.0000e+00 weaklyHypermeth 2.9241e-02 8.6380e-01 weaklyHypermeth 3.0146e-01 1.0000000 insignificant 0.114175 6.7517e-02 lowCoverage 7.4195e-01 lowCoverage 0.92873 0.911205 1.9724e-02 4 0.92068 0.914710 0.00597230 4.3959e-01 0.746720 lowCoverage 1.0000e+00 1 lowCoverage 4.7376e-01 0.733547 lowCoverage 1.0000e+00 1 lowCoverage -0.0280953 4.7577e-01 lowCoverage 1.00000000 lowCoverage 0.8997473 0.911205 0.0016657 4 0.7999103 0.91471 -0.1147996 1.0123e-01 7.2793e-02 lowCoverage 1.00000000 7.5827e-01 lowCoverage 4.5396e-01 1.2696e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -1.4227e-01 3.4366e-02 lowCoverage 0.52871472 lowCoverage chr9 128099944 128100944 97705 PBX3 ENSG00000167081 0.81416 283 6 0.77341 359 8 0.79130 247 8 0.85704 332 7 0.81255 129 7 0.83267 370 7 0.82279 199 7 0.80424 207 8 0.74469 174 7 0.77505 197 7 0.81556 274 7 0.73336 107 7 0.896011 212 7 0.56410 54 1 0.78003 238 7 0.56140 83 6 0.60049 93 5 0.66093 389 7 0.91433 240 7 0.865131 360 7 0.73745 92 6 0.686025 153 7 0.68224 231 7 0.75247 87 7 0.79034 160 7 0.75852 384 8 0.84443 255 7 0.65446 73 6 0.74873 284 7 0.782318 370 8 0.865454 586 8 0.84351 390 7 0.3922446 217 7 0.1174316 259 6 0.6387795 303 4 0.356770 76 6 0.552691 159 8 0.113712 477 7 0.832816 361 6 0.732829 338 7 0.593431 400 7 0.711458 255 6 0.766498 364 7 0.79637 0.76280 0.74019 0.84384 0.79304 0.85247 0.76630 0.77722 0.76698 0.83642 0.79221 0.71784 0.840050 0.79668 0.76684 0.585191 0.60961 0.74033 0.884254 0.819429 0.82461 0.723948 0.84300 0.83049 0.77885 0.83458 0.78537 0.77714 0.76600 0.851979 0.810094 0.82286 0.4187308 0.0975571 0.4880520 0.3289103 0.5129972 0.165466 0.784432 0.763514 0.681952 0.792813 0.704748 6 0.79481 0.81827 -0.02123123 7 0.70897 0.68479 0.02418124 0.8024575 0.1828686 insignificant 1 1.00000 insignificant 0.849207 0.2788761 insignificant 1 1 insignificant 0.00880063 0.7706180 insignificant 1 insignificant 0.79498 0.3152247 0.506268 7 0.78775 0.2745159 0.5132314 2.2127e-48 1.0000e+00 hypermethylated 3.6878e-46 1.0000e+00 hypermethylated 2.2696e-12 1.0000e+00 hypermethylated 1.7458e-10 1.00000000 hypermethylated 0.40902455 4.8416e-03 weaklyHypermeth 1.0087e-01 insignificant 0.79498 0.714203 0.0464602 7 0.78775 0.720970 0.0667770 9.8870e-06 0.576633 weaklyHypermeth 3.1893e-04 1 weaklyHypermeth 7.8312e-04 0.339903 weaklyHypermeth 2.1166e-02 1 weaklyHypermeth 0.04355605 3.6936e-01 insignificant 1.0000e+00 insignificant 0.81907 0.3152247 0.51419996 8 0.76088 0.2745159 0.48636333 2.8688e-38 9.9995e-01 hypermethylated 4.7813e-36 1.0000e+00 hypermethylated 8.3929e-12 9.9999e-01 hypermethylated 1.1990e-09 1.0000000 hypermethylated 0.400224 5.5697e-03 weaklyHypermeth 1.1367e-01 insignificant 0.81907 0.714203 6.3625e-02 7 0.76088 0.720970 0.03990892 1.1343e-06 0.745298 weaklyHypermeth 4.7264e-05 1 weaklyHypermeth 5.3819e-04 0.671389 weaklyHypermeth 1.8558e-02 1 weaklyHypermeth 0.0347554 4.5777e-01 insignificant 1.00000000 insignificant 0.3152247 0.714203 -0.4735223 7 0.2745159 0.72097 -0.4464544 1.0000e+00 2.2370e-17 hypomethylated 1.00000000 3.7283e-15 hypomethylated 1.0000e+00 2.2524e-06 hypomethylated 1.0000000 2.2524e-04 hypomethylated -3.6547e-01 7.2906e-03 weaklyHypometh 0.16201404 insignificant chr9 128273103 128274103 97733 FAM125B ENSG00000196814 0.78840 121 8 0.78222 209 8 0.81371 115 8 0.94643 36 4 0.72917 26 0 0.87534 117 7 0.82118 106 8 0.80246 65 6 0.81278 143 8 0.74264 93 8 0.82860 105 8 0.75000 78 8 0.762361 175 8 NA 0 0 0.85551 148 8 0.90804 45 5 0.84673 53 8 0.72083 30 2 0.89896 69 8 0.685462 59 5 0.52976 33 5 0.633333 11 0 0.76458 35 4 0.78929 48 8 0.75000 4 0 0.91407 210 8 0.75352 70 8 0.57500 38 5 0.78311 229 8 0.847251 277 8 0.808796 150 8 0.86667 108 8 0.1869591 152 8 0.0133929 167 8 0.0000000 57 8 0.000000 66 8 0.045833 49 5 0.000000 160 8 0.890797 82 8 0.842134 146 8 0.727679 47 6 0.962500 85 8 0.553571 34 4 0.78748 0.76698 0.81169 0.93899 0.73264 0.86694 0.82899 0.80985 0.80434 0.71028 0.81913 0.74873 0.746718 NA 0.84465 0.908482 0.83048 0.72812 0.889410 0.698003 0.52902 0.653867 0.76059 0.77535 0.76956 0.90359 0.74000 0.59583 0.76639 0.834174 0.787384 0.85754 0.1781651 0.0152530 0.0000000 0.0000000 0.0593750 0.000000 0.887649 0.830971 0.722098 0.958333 0.655310 0 0.80814 0.80379 0.00059316 8 0.81117 0.81080 0.00037169 0.5947762 0.5855608 insignificant 1 1.00000 insignificant 0.608751 0.7584297 insignificant 1 1 insignificant 0.05770916 0.1399725 insignificant 1 insignificant 0.80814 0.0430108 0.762104 8 0.81117 0.0446916 0.7664763 5.1414e-96 1.0000e+00 hypermethylated 2.5707e-93 1.0000e+00 hypermethylated 8.6712e-22 1.0000e+00 hypermethylated 2.2517e-19 1.00000000 hypermethylated 0.76795956 1.5753e-08 hypermethylated 1.7689e-06 hypermethylated 0.80814 0.847716 -0.0371526 8 0.81117 0.848835 -0.0376672 9.8270e-01 0.142851 insignificant 1.0000e+00 1 insignificant 9.7615e-01 0.285782 insignificant 1.0000e+00 1 insignificant 0.01365429 8.6040e-01 insignificant 1.0000e+00 insignificant 0.80379 0.0430108 0.75825971 8 0.81080 0.0446916 0.76610457 3.4679e-56 1.0000e+00 hypermethylated 1.7340e-53 1.0000e+00 hypermethylated 1.1234e-15 1.0000e+00 hypermethylated 2.8086e-13 1.0000000 hypermethylated 0.710250 1.1923e-10 hypermethylated 3.9742e-08 hypermethylated 0.80379 0.847716 -3.7825e-02 8 0.81080 0.848835 -0.03803885 9.3438e-01 0.276126 insignificant 1.0000e+00 1 insignificant 9.8382e-01 0.283216 insignificant 1.0000e+00 1 insignificant -0.0440549 5.9778e-01 insignificant 1.00000000 insignificant 0.0430108 0.847716 -0.8000527 8 0.0446916 0.84883 -0.8041434 1.0000e+00 5.4424e-37 hypomethylated 1.00000000 5.4424e-34 hypomethylated 1.0000e+00 5.7402e-12 hypomethylated 1.0000000 2.8701e-09 hypomethylated -7.5431e-01 1.2602e-04 hypomethylated 0.01328066 hypomethylated chr9 128333720 128334720 97742 ENSG00000221768 0.91736 131 4 0.66032 122 3 0.84444 26 3 0.89357 75 4 0.82381 29 3 0.88460 179 4 0.79607 67 3 0.77222 49 3 0.75000 27 2 0.74242 24 2 0.83712 110 3 0.75556 23 3 0.756944 17 2 0.96296 19 2 0.73810 30 2 0.92593 20 2 1.00000 8 0 0.87500 27 3 0.79103 74 4 0.849621 92 4 0.83419 30 2 0.851103 33 2 0.82565 76 5 0.87500 29 2 0.83778 183 3 0.86671 139 5 0.86667 27 2 0.50000 17 2 0.81401 75 2 0.893986 163 5 0.858992 222 5 0.85985 116 4 0.2608696 69 3 0.2624650 73 2 0.6666667 99 2 0.548682 177 5 0.546296 92 3 0.369127 195 5 0.738745 125 4 0.817939 71 4 0.815870 106 4 0.733454 118 4 0.809130 133 4 0.83472 0.74047 0.85000 0.94444 0.95000 0.88459 0.88161 0.82500 0.79167 0.86364 0.85985 0.83333 0.756944 0.94444 0.85714 0.888889 NA 0.83333 0.875000 0.965909 0.75128 0.851103 0.93080 0.91667 0.86778 0.91162 0.80000 1.00000 0.81401 0.914324 0.937801 0.83333 0.3695652 0.3936975 0.5000000 0.3699187 0.5861111 0.610318 0.875000 0.862069 0.968246 0.904655 0.847826 2 0.84247 0.86709 -0.02687904 2 0.81666 0.85291 -0.03624864 0.9331736 0.0462627 lowCoverage 1 1.00000 lowCoverage 0.891155 0.2041670 lowCoverage 1 1 lowCoverage 0.00519201 0.8860349 lowCoverage 1 lowCoverage 0.84247 0.4609929 0.374100 2 0.81666 0.4385246 0.3781324 3.1757e-12 1.0000e+00 lowCoverage 6.4809e-11 1.0000e+00 lowCoverage 6.2335e-06 9.9998e-01 lowCoverage 1.5204e-04 1.00000000 lowCoverage 0.38650260 1.8692e-03 lowCoverage 4.6769e-02 lowCoverage 0.84247 0.804702 0.0128050 2 0.81666 0.762109 0.0545483 9.3530e-02 0.466629 lowCoverage 1.0000e+00 1 lowCoverage 2.5947e-01 0.516515 lowCoverage 1.0000e+00 1 lowCoverage 0.04582612 1.1583e-01 lowCoverage 1.0000e+00 lowCoverage 0.86709 0.4609929 0.40601706 5 0.85291 0.4385246 0.41438108 2.5083e-11 1.0000e+00 hypermethylated 6.6008e-10 1.0000e+00 hypermethylated 7.9761e-06 1.0000e+00 hypermethylated 1.9940e-04 1.0000000 hypermethylated 0.381311 1.4817e-03 lowCoverage 3.8993e-02 lowCoverage 0.86709 0.804702 3.8200e-02 4 0.85291 0.762109 0.09079690 1.0872e-02 0.935965 lowCoverage 1.6726e-01 1 lowCoverage 8.4705e-02 0.829206 lowCoverage 1.0000e+00 1 lowCoverage 0.0406341 2.7341e-01 lowCoverage 1.00000000 lowCoverage 0.4609929 0.804702 -0.3480791 4 0.4385246 0.76211 -0.3235842 9.9996e-01 7.6142e-05 lowCoverage 1.00000000 1.7305e-03 lowCoverage 9.9999e-01 3.2798e-04 lowCoverage 1.0000000 1.1310e-02 lowCoverage -3.4068e-01 3.5105e-03 lowCoverage 0.10970364 lowCoverage chr9 128389496 128390496 97744 ENSG00000221173 0.94975 44 3 0.55343 43 2 0.78768 72 5 0.94286 27 2 0.76611 47 2 0.89148 89 6 0.92828 62 2 0.87338 66 6 0.89167 58 2 0.88259 32 2 0.87452 166 6 0.89545 31 2 0.918899 57 2 1.00000 2 0 0.67879 34 2 0.22222 15 2 0.46833 30 2 0.81852 35 4 0.84503 52 3 0.736264 58 2 0.89167 42 3 0.783333 19 1 0.81563 65 3 0.90741 56 6 0.88889 33 4 0.85466 127 6 0.74634 31 2 0.78485 26 2 0.78819 46 3 0.840694 90 6 0.892949 175 6 0.93248 117 6 0.6058635 121 6 0.1785714 45 3 0.4000000 47 2 0.250000 14 1 0.583333 34 3 0.645105 110 6 0.593519 46 3 0.282500 49 2 0.574074 37 3 0.096154 39 2 0.547222 36 3 0.84462 0.53290 0.56543 0.83372 0.78436 0.68512 0.76767 0.75655 0.66148 0.87529 0.75842 0.73659 0.738583 NA 0.74441 0.273224 0.42549 0.51548 0.708082 0.684021 0.66148 0.508197 0.76833 0.71220 0.75000 0.62354 0.74743 0.81162 0.67350 0.633181 0.785624 0.91926 0.1683480 0.0843091 0.0000000 0.2049180 0.0000000 0.369859 0.331967 0.254098 0.202186 0.085750 0.131148 1 0.77134 0.83434 -0.03050838 2 0.86178 0.87797 -0.01619182 0.3096442 0.2351978 lowCoverage 1 1.00000 lowCoverage 0.228426 0.7889260 lowCoverage 1 1 lowCoverage -0.04766225 0.3080948 lowCoverage 1 lowCoverage 0.77134 0.4231806 0.436901 2 0.86178 0.5416043 0.3201773 1.8411e-17 1.0000e+00 lowCoverage 5.7534e-16 1.0000e+00 lowCoverage 2.0528e-08 1.0000e+00 lowCoverage 8.9251e-07 1.00000000 lowCoverage 0.35244941 4.8372e-03 lowCoverage 1.0087e-01 lowCoverage 0.77134 0.371981 0.3922379 2 0.86178 0.578363 0.2834187 1.5864e-14 0.997080 lowCoverage 1.3220e-12 1 lowCoverage 1.0524e-06 0.999168 lowCoverage 6.5772e-05 1 lowCoverage 0.37756797 1.4059e-02 lowCoverage 4.1718e-01 lowCoverage 0.83434 0.4231806 0.40741453 6 0.87797 0.5416043 0.33636914 2.0446e-15 1.0000e+00 hypermethylated 6.8155e-14 1.0000e+00 hypermethylated 3.3513e-07 1.0000e+00 hypermethylated 1.3405e-05 1.0000000 hypermethylated 0.400112 3.7232e-03 lowCoverage 8.0939e-02 lowCoverage 0.83434 0.371981 4.1689e-01 3 0.87797 0.578363 0.29961056 1.7892e-12 0.998850 lowCoverage 1.4910e-10 1 lowCoverage 1.1378e-05 0.998652 lowCoverage 8.7521e-04 1 lowCoverage 0.4252302 1.1515e-02 lowCoverage 0.41125429 lowCoverage 0.4231806 0.371981 -0.0772789 3 0.5416043 0.57836 -0.0367586 6.4109e-01 9.9961e-02 lowCoverage 1.00000000 9.2556e-01 lowCoverage 9.5696e-01 3.0000e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 2.5119e-02 8.4847e-01 lowCoverage 1.00000000 lowCoverage chr9 128452519 128453519 97752 LMX1B ENSG00000136944 0.74496 107 4 0.55930 189 6 0.55417 104 5 0.54311 152 6 0.38394 99 7 0.54348 134 6 0.40268 85 5 0.51623 161 7 0.54822 209 7 0.58075 165 5 0.70261 208 7 0.44337 91 6 0.315552 190 6 0.45054 105 6 0.47914 166 5 0.80556 51 4 0.23167 37 4 0.49163 146 5 0.64498 69 5 0.311231 130 6 0.70601 107 7 0.133751 174 6 0.60171 116 5 0.50878 97 7 0.54939 206 5 0.48221 177 5 0.42744 129 8 0.71154 83 8 0.49189 127 6 0.456412 209 7 0.240820 288 7 0.84969 161 7 0.4162239 164 7 0.4452362 141 6 0.3282816 273 5 0.216209 110 6 0.334037 148 8 0.473047 181 7 0.363602 141 6 0.350559 150 5 0.404550 85 5 0.310709 169 4 0.217638 144 6 0.68845 0.60417 0.65176 0.52283 0.67107 0.79477 0.53587 0.57270 0.59102 0.77112 0.74116 0.55753 0.388696 0.57113 0.44043 0.655073 0.35092 0.51019 0.552511 0.441890 0.73173 0.221743 0.80680 0.65252 0.77777 0.69056 0.67803 0.97629 0.57877 0.615914 0.319354 0.88091 0.5374258 0.5683397 0.5761253 0.3858753 0.6212954 0.694468 0.249470 0.306062 0.273445 0.253513 0.314612 3 0.53627 0.55489 -0.01851536 6 0.40527 0.40252 0.00274887 0.4375125 0.8609302 insignificant 1 1.00000 insignificant 0.802827 0.2166934 insignificant 1 1 insignificant -0.00064868 0.9922232 insignificant 1 insignificant 0.53689 0.4679171 0.040896 6 0.44211 0.3608647 0.0812494 4.2615e-07 5.8246e-02 weaklyHypermeth 5.9188e-06 1.0000e+00 weaklyHypermeth 4.5255e-03 9.3220e-01 weaklyHypermeth 5.7285e-02 1.00000000 weaklyHypermeth 0.14381565 1.4022e-02 weaklyHypermeth 2.2566e-01 insignificant 0.53840 0.215429 0.3095474 6 0.46814 0.345254 0.1228898 1.1547e-12 0.983734 hypermethylated 7.2166e-11 1 hypermethylated 8.5079e-09 0.998755 hypermethylated 1.4180e-06 1 hypermethylated 0.18324320 1.2896e-03 weaklyHypermeth 7.5859e-02 weaklyHypermeth 0.55609 0.4660767 0.10792891 7 0.42438 0.2835365 0.14084775 1.1594e-03 9.5630e-01 weaklyHypermeth 1.2334e-02 1.0000e+00 weaklyHypermeth 9.9809e-03 9.9992e-01 weaklyHypermeth 1.1472e-01 1.0000000 insignificant 0.144464 5.2409e-02 insignificant 5.9556e-01 insignificant 0.55411 0.214804 3.3195e-01 6 0.37851 0.313867 0.06464212 5.5490e-06 0.955475 hypermethylated 1.9134e-04 1 hypermethylated 2.3010e-05 0.997246 hypermethylated 1.3358e-03 1 hypermethylated 0.1838919 1.3004e-02 weaklyHypermeth 0.42352332 insignificant 0.4679171 0.214804 0.2879705 6 0.3608647 0.31387 0.0469975 5.8666e-05 1.6920e-01 hypermethylated 0.00488883 1.0000e+00 hypermethylated 6.5757e-02 8.2396e-01 insignificant 1.0000000 1.0000e+00 insignificant 3.9428e-02 4.5153e-01 insignificant 1.00000000 insignificant chr9 128464245 128465245 97757 LMX1B ENSG00000136944 0.61968 267 7 0.56292 103 7 0.72056 101 7 0.65029 327 7 0.67825 72 5 0.65923 314 7 0.66822 126 7 0.49275 128 7 0.67017 150 7 0.52754 165 7 0.58661 191 7 0.66135 94 7 0.678089 197 7 0.76901 54 4 0.53598 162 6 0.68091 76 5 0.63273 793 7 0.53787 376 7 0.60110 135 7 0.630176 200 7 0.55357 73 5 0.419459 153 6 0.54292 129 7 0.24504 91 5 0.52560 119 5 0.63478 167 7 0.32419 80 6 0.49429 99 6 0.55803 157 7 0.641132 174 7 0.547426 258 7 0.67181 224 7 0.6742197 81 7 0.6950965 117 7 1.0000000 17 2 0.591156 75 5 0.778644 98 7 0.884591 153 7 0.648181 316 7 0.574941 306 7 0.409264 309 7 0.549115 256 7 0.472629 288 7 0.59377 0.56401 0.70613 0.62601 0.62365 0.64665 0.61472 0.54469 0.66988 0.50926 0.59348 0.63668 0.637311 0.74321 0.56094 0.646097 0.58017 0.52571 0.600129 0.635298 0.50077 0.468117 0.50504 0.40861 0.55753 0.65500 0.48737 0.60229 0.51243 0.625875 0.540628 0.61526 0.5915146 0.7455040 0.8727540 0.6243181 0.8432623 0.882870 0.622850 0.575190 0.387887 0.534306 0.458692 5 0.58546 0.55800 0.03152035 7 0.60948 0.57183 0.03764648 0.0322539 0.8271243 weaklyHypermeth 1 1.00000 insignificant 0.014400 0.9997785 weaklyHypermeth 1 1 insignificant 0.11498438 0.0115818 weaklyHypermeth 1 insignificant 0.58546 0.7689464 -0.166632 7 0.60948 0.7608931 -0.1514129 9.9997e-01 3.0763e-07 weaklyHypometh 1.0000e+00 6.9136e-05 weaklyHypometh 9.9675e-01 1.9082e-04 weaklyHypometh 1.0000e+00 0.03816386 weaklyHypometh -0.14244688 6.8024e-02 insignificant 7.0128e-01 insignificant 0.58546 0.522712 0.0600237 7 0.60948 0.536474 0.0730064 1.1427e-03 0.991533 weaklyHypermeth 2.2854e-02 1 weaklyHypermeth 1.6772e-03 0.996905 weaklyHypermeth 3.9005e-02 1 weaklyHypermeth 0.09734506 7.6860e-02 insignificant 1.0000e+00 insignificant 0.55800 0.7689464 -0.19943151 7 0.57183 0.7608931 -0.18905935 9.9999e-01 5.0564e-06 weaklyHypometh 1.0000e+00 7.2235e-04 weaklyHypometh 1.0000e+00 1.0895e-05 weaklyHypometh 1.0000e+00 0.0054474 weaklyHypometh -0.257431 6.0499e-03 weaklyHypometh 1.1634e-01 insignificant 0.55800 0.522712 4.1890e-02 7 0.57183 0.536474 0.03535990 1.8284e-01 0.900997 insignificant 1.0000e+00 1 insignificant 4.6719e-01 0.774167 insignificant 1.0000e+00 1 insignificant -0.0176393 7.5634e-01 insignificant 1.00000000 insignificant 0.7689464 0.522712 0.2450698 7 0.7608931 0.53647 0.2244192 8.7742e-07 1.0000e+00 hypermethylated 0.00014624 1.0000e+00 hypermethylated 2.2673e-05 1.0000e+00 hypermethylated 0.0113365 1.0000e+00 hypermethylated 2.3979e-01 1.1092e-02 weaklyHypermeth 0.23107544 insignificant chr9 128923134 128924134 97775 RALGPS1 ENSG00000136828 0.28033 316 7 0.23645 363 7 0.54783 285 7 0.28044 297 6 0.34758 242 7 0.50459 452 7 0.33833 230 7 0.18965 358 7 0.25441 258 7 0.41297 259 7 0.45738 363 7 0.42971 114 7 0.078317 250 7 0.27400 199 7 0.19179 445 7 0.36994 95 5 0.75000 5 0 0.16693 380 6 0.10056 500 6 0.063418 462 7 0.45852 132 6 0.013820 142 4 0.57000 184 6 0.45174 209 8 0.41815 107 4 0.18717 494 7 0.25308 480 7 0.16983 193 6 0.33767 280 6 0.083723 572 7 0.058833 782 7 0.76817 323 7 0.0000000 334 7 0.0026954 231 6 0.0000000 433 6 0.000000 22 3 0.058077 343 7 0.021475 483 7 0.140499 506 7 0.078784 333 6 0.098594 273 6 0.109776 431 6 0.056071 334 6 0.30739 0.20279 0.56213 0.16838 0.36436 0.51460 0.37126 0.18901 0.25519 0.40544 0.48593 0.44105 0.075452 0.24676 0.18869 0.292394 0.74160 0.17933 0.092101 0.066078 0.47267 0.019917 0.58620 0.50580 0.35055 0.18324 0.28688 0.26940 0.35604 0.070486 0.059669 0.80907 0.0000000 0.0031447 0.0000000 0.0049364 0.0094943 0.025482 0.044450 0.073501 0.080298 0.072343 0.060455 6 0.27686 0.26629 0.00732611 7 0.26303 0.24959 0.01343922 0.9626664 0.9714178 insignificant 1 1.00000 insignificant 0.988729 0.9592370 insignificant 1 1 insignificant -0.00049382 0.9948975 insignificant 1 insignificant 0.27688 0.0097508 0.271313 7 0.24194 0.0555460 0.1863977 1.0717e-13 1.0000e+00 hypermethylated 2.5516e-12 1.0000e+00 hypermethylated 2.8651e-13 1.0000e+00 hypermethylated 4.0930e-11 1.00000000 hypermethylated 0.30002300 1.8249e-07 hypermethylated 1.4038e-05 hypermethylated 0.27693 0.090085 0.2020243 6 0.29194 0.060236 0.2317073 4.4315e-06 1.000000 hypermethylated 1.5281e-04 1 hypermethylated 1.2815e-08 1.000000 hypermethylated 1.8307e-06 1 hypermethylated 0.21698579 2.3435e-05 hypermethylated 3.3479e-03 hypermethylated 0.26646 0.0097508 0.26524797 7 0.26019 0.0555460 0.20464103 9.0889e-07 9.9999e-01 hypermethylated 1.4201e-05 1.0000e+00 hypermethylated 3.2936e-10 1.0000e+00 hypermethylated 2.4887e-08 1.0000000 hypermethylated 0.300517 7.9007e-04 hypermethylated 2.3237e-02 hypermethylated 0.26612 0.090085 1.9547e-01 6 0.22447 0.060236 0.16423632 2.2868e-03 1.000000 weaklyHypermeth 4.4838e-02 1 weaklyHypermeth 1.6457e-05 1.000000 weaklyHypermeth 1.1051e-03 1 weaklyHypermeth 0.2174796 7.2421e-03 weaklyHypermeth 0.41125429 insignificant 0.0097614 0.090133 -0.0868115 6 0.0617178 0.06693 -0.0052116 1.0000e+00 5.7334e-06 weaklyHypometh 1.00000000 1.7374e-04 weaklyHypometh 1.0000e+00 1.2056e-04 weaklyHypometh 1.0000000 5.0235e-03 weaklyHypometh -8.3037e-02 1.7169e-03 weaklyHypometh 0.06603556 weaklyHypometh chr9 128935628 128936628 97776 ANGPTL2 ENSG00000136859 0.61806 311 7 0.39028 229 7 0.58317 224 7 0.49320 126 7 0.48814 188 7 0.67537 331 7 0.55702 202 7 0.57877 226 7 0.47096 151 7 0.79029 102 6 0.55762 340 7 0.56698 91 7 0.402340 168 7 0.41636 89 5 0.28316 219 7 0.62571 124 5 0.65205 33 2 0.35348 250 7 0.42711 326 7 0.396479 210 7 0.64200 77 7 0.417718 109 7 0.62936 186 7 0.37298 121 7 0.51920 77 6 0.43717 392 7 0.47437 169 7 0.51820 81 6 0.58112 260 7 0.466025 419 7 0.426142 500 7 0.72605 311 7 0.0552830 202 7 0.0639361 150 7 0.0000000 123 2 0.014286 74 6 0.028439 248 7 0.042788 297 7 0.366436 330 7 0.497123 280 7 0.366029 230 7 0.320437 218 7 0.229198 183 7 0.55511 0.41440 0.61189 0.55085 0.58392 0.71284 0.57744 0.62955 0.56765 0.72307 0.58280 0.67901 0.344309 0.49747 0.42605 0.698165 0.58590 0.42549 0.463343 0.433368 0.68077 0.401914 0.75446 0.61237 0.57704 0.48515 0.49420 0.52849 0.60801 0.523028 0.466617 0.75073 0.0496850 0.0794743 0.0066321 0.0151993 0.0393810 0.037840 0.393642 0.507737 0.392978 0.372812 0.252041 5 0.52919 0.53812 -0.01909175 7 0.48223 0.47556 0.00667065 0.8863535 0.3222137 insignificant 1 1.00000 insignificant 0.851642 0.4879431 insignificant 1 1 insignificant -0.00120128 0.9772688 insignificant 1 insignificant 0.52919 0.0301645 0.497037 7 0.48223 0.0246902 0.4575375 8.3413e-37 1.0000e+00 hypermethylated 1.0427e-34 1.0000e+00 hypermethylated 7.1911e-17 1.0000e+00 hypermethylated 1.4382e-14 1.00000000 hypermethylated 0.48220504 6.0482e-14 hypermethylated 2.0161e-11 hypermethylated 0.52920 0.401289 0.1536686 7 0.47778 0.325360 0.1524247 8.2779e-07 0.999794 weaklyHypermeth 3.1838e-05 1 weaklyHypermeth 2.6082e-06 0.999984 weaklyHypermeth 1.3727e-04 1 weaklyHypermeth 0.16048226 1.4932e-02 weaklyHypermeth 4.2664e-01 insignificant 0.53812 0.0301645 0.50450448 7 0.47556 0.0246902 0.45086688 2.6052e-32 1.0000e+00 hypermethylated 2.8947e-30 1.0000e+00 hypermethylated 1.6351e-13 1.0000e+00 hypermethylated 2.7252e-11 1.0000000 hypermethylated 0.483406 1.3347e-09 hypermethylated 3.3368e-07 hypermethylated 0.53838 0.401289 1.7474e-01 7 0.49028 0.325360 0.16491974 4.6104e-06 0.999976 weaklyHypermeth 1.6466e-04 1 weaklyHypermeth 7.8496e-05 0.999860 weaklyHypermeth 3.9248e-03 1 weaklyHypermeth 0.1616835 1.5309e-02 weaklyHypermeth 0.45025221 insignificant 0.0302475 0.401289 -0.3477201 7 0.0308628 0.32536 -0.2944972 1.0000e+00 6.4774e-19 hypomethylated 1.00000000 1.6026e-16 hypomethylated 1.0000e+00 3.5775e-10 hypomethylated 1.0000000 8.9438e-08 hypomethylated -3.2172e-01 1.2930e-03 weaklyHypometh 0.05877271 weaklyHypometh chr9 129646740 129647740 97794 ENSG00000222455 0.64244 186 7 0.60047 318 9 0.54485 195 9 0.78519 158 5 0.71616 82 6 0.70210 313 9 0.73403 146 9 0.68750 287 9 0.67205 229 9 0.68731 153 7 0.86316 325 10 0.76731 93 6 0.588835 301 8 0.76364 145 7 0.56317 201 8 0.66074 73 5 0.72619 29 3 0.39114 230 6 0.82277 176 7 0.751623 270 9 0.78119 93 8 0.628316 167 8 0.79519 157 7 0.78922 135 9 0.63170 146 6 0.58281 337 9 0.42192 195 9 0.41858 86 5 0.75059 222 7 0.631158 482 9 0.776322 449 9 0.82319 311 9 0.4600122 270 9 0.7612451 138 7 0.4704861 139 6 0.290972 81 6 0.445448 248 11 0.441912 350 9 0.572098 202 6 0.680755 212 7 0.573419 143 6 0.485946 174 5 0.508726 201 5 0.59407 0.53681 0.64129 0.65413 0.72124 0.72547 0.63858 0.72200 0.58576 0.68505 0.81906 0.66994 0.532325 0.63681 0.54880 0.506746 0.51911 0.38605 0.723593 0.679638 0.65475 0.423683 0.65026 0.82155 0.65229 0.55985 0.56677 0.43309 0.67319 0.611605 0.658857 0.79913 0.3815030 0.5188601 0.4260799 0.3275028 0.5145710 0.349623 0.684596 0.545571 0.580318 0.420537 0.500327 5 0.67187 0.66511 0.01085940 9 0.57969 0.52507 0.05461912 0.2159683 0.9721861 insignificant 1 1.00000 insignificant 0.675905 0.9954221 insignificant 1 1 insignificant 0.01435125 0.7659981 insignificant 1 insignificant 0.67222 0.4502447 0.234158 9 0.66218 0.3952438 0.2669344 1.1011e-14 9.9999e-01 hypermethylated 2.6856e-13 1.0000e+00 hypermethylated 2.2112e-05 1.0000e+00 hypermethylated 4.7048e-04 1.00000000 hypermethylated 0.20518738 2.0042e-02 weaklyHypermeth 2.8631e-01 insignificant 0.67214 0.609442 0.0575795 6 0.65486 0.588238 0.0666217 2.3775e-03 0.948951 weaklyHypermeth 4.2456e-02 1 weaklyHypermeth 2.4504e-02 0.985884 weaklyHypermeth 4.0840e-01 1 insignificant 0.11934446 1.9311e-02 weaklyHypermeth 5.2192e-01 insignificant 0.66595 0.4502447 0.21520440 9 0.58213 0.3952438 0.18689033 2.3039e-08 1.0000e+00 hypermethylated 4.3470e-07 1.0000e+00 hypermethylated 4.7753e-03 1.0000e+00 weaklyHypermeth 6.1221e-02 1.0000000 weaklyHypermeth 0.190836 3.0260e-02 weaklyHypermeth 3.6903e-01 insignificant 0.66691 0.609442 5.7034e-02 6 0.63065 0.588238 0.04240735 1.3904e-01 0.941384 insignificant 1.0000e+00 1 insignificant 9.6817e-02 0.966248 insignificant 1.0000e+00 1 insignificant 0.1049932 6.8518e-02 insignificant 1.00000000 insignificant 0.4509804 0.609442 -0.1683849 6 0.4281808 0.58824 -0.1600572 9.9931e-01 1.1388e-03 weaklyHypometh 1.00000000 1.9634e-02 weaklyHypometh 9.8810e-01 1.3285e-01 insignificant 1.0000000 1.0000e+00 insignificant -8.5843e-02 2.6480e-01 insignificant 1.00000000 insignificant chr9 129648243 129649243 97795 ENSG00000222455 0.82996 479 11 0.76915 380 12 0.79847 326 12 0.85634 427 11 0.84713 208 11 0.86335 434 11 0.77517 318 9 0.71193 354 12 0.81448 310 12 0.83068 254 12 0.72303 359 12 0.82722 137 7 0.809342 359 11 0.90069 141 7 0.78650 356 11 0.87515 194 11 0.77818 74 4 0.88536 479 9 0.83030 399 11 0.847420 418 12 0.63966 135 7 0.835821 199 11 0.81924 352 11 0.86612 127 10 0.70171 441 12 0.90363 485 12 0.77400 257 11 0.76279 151 11 0.81182 411 11 0.859730 483 12 0.843685 761 12 0.91226 446 12 0.6696751 317 12 0.7747712 366 8 1.0000000 195 6 0.898580 214 8 0.614309 244 11 0.836235 556 12 0.754417 411 12 0.868504 371 8 0.888953 334 11 0.757591 319 7 0.806924 352 8 0.84022 0.78242 0.72891 0.84011 0.85171 0.82171 0.88629 0.74944 0.82941 0.85031 0.83836 0.79631 0.874306 0.80624 0.85572 0.872879 0.89913 0.82097 0.881288 0.849318 0.72392 0.856389 0.77249 0.86610 0.77557 0.88119 0.81714 0.85676 0.81503 0.894451 0.872447 0.84448 0.5420429 0.5872220 0.9325817 0.7966425 0.6688518 0.753940 0.840804 0.806131 0.825663 0.685738 0.712371 7 0.83768 0.84911 -0.00724799 11 0.70261 0.70162 0.00099389 0.6807631 0.2820458 insignificant 1 1.00000 insignificant 0.857649 0.3989521 insignificant 1 1 insignificant 0.00712190 0.7857432 insignificant 1 insignificant 0.83773 0.7674419 0.082381 11 0.71913 0.6408003 0.0783341 1.8484e-05 5.1199e-02 weaklyHypermeth 2.2542e-04 1.0000e+00 weaklyHypermeth 6.2907e-01 5.4042e-02 insignificant 1.0000e+00 1.00000000 insignificant 0.01906517 7.6150e-01 insignificant 1.0000e+00 insignificant 0.83865 0.790151 0.0450630 7 0.80674 0.733198 0.0735462 1.3068e-02 0.306128 weaklyHypermeth 1.8939e-01 1 insignificant 5.7433e-02 0.460270 insignificant 8.0892e-01 1 insignificant 0.00271553 9.3093e-01 insignificant 1.0000e+00 insignificant 0.84911 0.7678477 0.08501380 12 0.70162 0.6784944 0.02312458 3.2063e-04 5.5632e-01 weaklyHypermeth 3.6435e-03 1.0000e+00 weaklyHypermeth 6.7369e-01 1.9034e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.011943 8.5544e-01 insignificant 1.0000e+00 insignificant 0.84987 0.790151 5.0656e-02 8 0.78054 0.733198 0.04733928 9.7313e-03 0.583622 weaklyHypermeth 1.5620e-01 1 insignificant 5.1353e-02 0.595420 insignificant 7.5519e-01 1 insignificant -0.0044064 9.0541e-01 insignificant 1.00000000 insignificant 0.7685381 0.790151 -0.0381162 8 0.7524575 0.73320 0.0192594 3.4678e-01 1.1941e-01 insignificant 1.00000000 1.0000e+00 insignificant 2.9613e-01 6.6132e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.6350e-02 8.0815e-01 insignificant 1.00000000 insignificant chr9 129663999 129664999 97796 ENG ENSG00000106991 0.80090 116 4 0.75714 50 5 0.47091 77 5 0.89583 106 5 0.67347 42 5 0.64766 194 5 0.81667 48 2 0.65522 73 5 0.61469 65 5 0.84980 77 5 0.79339 123 5 0.59802 28 4 0.740488 91 5 0.85185 43 3 0.86923 60 4 0.56667 11 1 0.83810 19 3 0.64820 112 5 0.72196 59 5 0.695151 151 5 0.61923 69 5 0.710794 74 5 0.75397 64 4 0.70989 52 4 0.84289 63 5 0.81648 98 5 0.63067 112 6 0.56291 52 5 0.87336 38 3 0.699671 78 5 0.817641 119 5 0.80978 198 5 0.3772509 89 5 0.5402597 42 5 0.5344697 116 3 0.420635 53 3 0.648810 48 4 0.580607 84 5 0.836932 88 4 0.629108 110 5 0.715278 76 4 0.372137 105 5 0.725758 88 5 0.83380 0.88318 0.76548 0.88772 0.97063 0.89690 0.89720 0.90214 0.82264 0.87420 0.92160 0.67461 0.795674 0.85598 0.83419 0.878310 0.85466 0.67123 0.843718 0.833807 0.86991 0.719315 0.96469 0.89656 0.90523 0.78190 0.87854 0.86957 0.94249 0.841770 0.932916 0.85738 0.6653381 0.5981308 0.4878602 0.6360332 0.7846573 0.769500 0.855661 0.656018 0.693536 0.487858 0.822501 2 0.83528 0.83874 -0.01033455 5 0.59336 0.64610 -0.05273893 0.8397845 0.1679797 insignificant 1 1.00000 insignificant 0.876614 0.2041862 insignificant 1 1 insignificant -0.01200871 0.7567642 lowCoverage 1 lowCoverage 0.83528 0.5972222 0.221814 5 0.59336 0.4206038 0.1727604 1.7973e-10 9.2414e-01 hypermethylated 3.2679e-09 1.0000e+00 hypermethylated 4.3197e-03 7.7129e-01 weaklyHypermeth 5.6100e-02 1.00000000 weaklyHypermeth 0.20826094 1.9038e-03 lowCoverage 4.6769e-02 lowCoverage 0.83997 0.713062 0.1682251 5 0.70481 0.731005 -0.0261991 8.5935e-09 0.676502 weaklyHypermeth 3.4374e-07 1 weaklyHypermeth 1.3946e-04 0.862095 weaklyHypermeth 5.3640e-03 1 weaklyHypermeth 0.06942375 4.3852e-01 lowCoverage 1.0000e+00 lowCoverage 0.83874 0.5972222 0.24414906 5 0.64610 0.4206038 0.22549935 5.9378e-08 9.7738e-01 hypermethylated 1.0796e-06 1.0000e+00 hypermethylated 3.3367e-03 9.9827e-01 weaklyHypermeth 4.5708e-02 1.0000000 weaklyHypermeth 0.220270 1.3890e-03 lowCoverage 3.7541e-02 lowCoverage 0.84279 0.713062 1.7379e-01 5 0.69205 0.731005 -0.03895305 3.9228e-06 0.762214 weaklyHypermeth 1.4529e-04 1 weaklyHypermeth 1.9036e-04 0.941147 weaklyHypermeth 9.0647e-03 1 weaklyHypermeth 0.0814325 3.7206e-01 lowCoverage 1.00000000 lowCoverage 0.6055980 0.713062 -0.0432435 5 0.4421324 0.73101 -0.2888728 7.6481e-01 2.3246e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.4475e-01 3.0154e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.3884e-01 1.6632e-01 lowCoverage 1.00000000 lowCoverage chr9 130046389 130047389 97801 MIR199B ENSG00000207581 0.56393 257 6 0.42125 199 9 0.48336 223 8 0.50273 218 8 0.44543 158 8 0.54123 350 8 0.59134 167 8 0.52047 211 8 0.39442 133 8 0.56885 197 8 0.58148 305 8 0.26378 83 8 0.412399 130 7 0.43480 137 8 0.51986 192 8 0.42029 81 5 1.00000 184 2 0.37912 383 9 0.57581 257 8 0.322420 261 7 0.34106 168 7 0.417898 72 3 0.37090 205 8 0.47904 201 8 0.61670 84 6 0.42428 327 10 0.26665 245 11 0.42141 98 7 0.44318 306 8 0.518500 266 9 0.426859 493 9 0.45133 256 8 0.0022321 319 8 0.0113246 395 8 0.0022727 573 8 0.000000 16 2 0.193849 237 7 0.147264 393 11 0.491649 250 8 0.445212 252 7 0.288085 212 4 0.232962 264 8 0.472139 221 8 0.80972 0.51837 0.67933 0.71669 0.62919 0.72658 0.70139 0.67631 0.68586 0.74638 0.71573 0.77933 0.722116 0.72422 0.67002 0.667878 0.79616 0.40886 0.726048 0.695211 0.63955 0.556818 0.63613 0.61409 0.67956 0.71265 0.60660 0.57976 0.73104 0.680661 0.594402 0.69275 0.0023819 0.0251074 0.0042683 0.0030949 0.0059070 0.126932 0.784143 0.626492 0.637363 0.521721 0.583417 3 0.60267 0.54191 0.02180876 8 0.48641 0.39532 0.09108469 0.0562360 0.9992263 insignificant 1 1.00000 insignificant 0.059542 0.9999038 insignificant 1 1 insignificant 0.06566519 0.1268923 insignificant 1 insignificant 0.60223 0.0320911 0.564396 8 0.46430 0.1764936 0.2878056 6.2172e-34 1.0000e+00 hypermethylated 5.1810e-32 1.0000e+00 hypermethylated 1.0515e-12 1.0000e+00 hypermethylated 1.0515e-10 1.00000000 hypermethylated 0.43765908 2.5306e-07 hypermethylated 1.8076e-05 hypermethylated 0.60224 0.651085 0.0329470 7 0.43785 0.417679 0.0201686 1.7632e-01 0.995031 insignificant 1.0000e+00 1 insignificant 1.1906e-01 0.999781 insignificant 1.0000e+00 1 insignificant 0.11114013 1.1358e-01 insignificant 1.0000e+00 insignificant 0.54211 0.0321244 0.50445209 8 0.41509 0.1941430 0.22094723 3.6903e-33 9.9983e-01 hypermethylated 4.6129e-31 1.0000e+00 hypermethylated 6.3100e-10 1.0000e+00 hypermethylated 4.2067e-08 1.0000000 hypermethylated 0.371994 6.3395e-06 hypermethylated 3.3366e-04 hypermethylated 0.54176 0.650794 1.1930e-02 7 0.37560 0.383424 -0.00782808 2.8281e-01 0.951671 insignificant 1.0000e+00 1 insignificant 5.5310e-01 0.999119 insignificant 1.0000e+00 1 insignificant 0.0454749 4.6482e-01 insignificant 1.00000000 insignificant 0.0311365 0.650542 -0.6143664 7 0.1517295 0.39570 -0.2439661 1.0000e+00 8.3274e-15 hypomethylated 1.00000000 6.9395e-13 hypomethylated 1.0000e+00 1.0413e-04 hypomethylated 1.0000000 4.9587e-03 hypomethylated -3.2652e-01 1.1683e-03 weaklyHypometh 0.05877271 weaklyHypometh chr9 130046682 130047682 97802 MIR199B ENSG00000207581 0.56393 257 6 0.40550 197 9 0.52730 222 8 0.50273 218 8 0.35300 156 8 0.54123 350 8 0.55991 166 8 0.48051 210 8 0.39442 133 8 0.56885 197 8 0.51709 303 8 0.26378 83 8 0.412399 130 7 0.43480 137 8 0.51986 192 8 0.42029 81 5 1.00000 184 2 0.37912 383 9 0.53339 256 8 0.322420 261 7 0.34106 168 7 0.417898 72 3 0.34111 201 8 0.47904 201 8 0.57837 83 6 0.38000 326 10 0.26665 245 11 0.40831 96 7 0.39255 305 8 0.398125 262 9 0.426859 493 9 0.45133 256 8 0.0024038 318 8 0.0113246 395 8 0.0027778 571 8 0.000000 16 2 0.115046 233 7 0.147264 393 11 0.532619 249 8 0.445212 252 7 0.288085 212 4 0.232962 264 8 0.428151 220 8 0.80972 0.51837 0.67933 0.71669 0.62919 0.72658 0.70139 0.67631 0.68586 0.74638 0.71573 0.77933 0.722116 0.72422 0.67002 0.667878 0.79616 0.40886 0.726048 0.695211 0.63955 0.556818 0.63613 0.61409 0.67956 0.71265 0.60660 0.57976 0.73104 0.680661 0.594402 0.69275 0.0023819 0.0251074 0.0042683 0.0030949 0.0059070 0.126932 0.784143 0.626492 0.637363 0.521721 0.583417 3 0.60219 0.54082 0.02180084 8 0.42303 0.33621 0.08682102 0.0489837 0.9992879 weaklyHypermeth 1 1.00000 insignificant 0.040723 0.9998520 weaklyHypermeth 1 1 insignificant 0.07825167 0.0614640 insignificant 1 insignificant 0.60175 0.0306334 0.564876 8 0.40077 0.1429576 0.2578100 1.2865e-35 1.0000e+00 hypermethylated 1.4295e-33 1.0000e+00 hypermethylated 4.0401e-13 1.0000e+00 hypermethylated 4.4889e-11 1.00000000 hypermethylated 0.43855813 2.6787e-09 hypermethylated 4.4645e-07 hypermethylated 0.60224 0.650794 0.0334487 7 0.42831 0.383424 0.0448844 1.3644e-01 0.997667 insignificant 1.0000e+00 1 insignificant 8.4009e-02 0.999906 insignificant 1.0000e+00 1 insignificant 0.09962168 1.6205e-01 insignificant 1.0000e+00 insignificant 0.54102 0.0306653 0.50540143 8 0.35599 0.1597761 0.19621242 3.3992e-34 9.9941e-01 hypermethylated 4.8560e-32 1.0000e+00 hypermethylated 2.0502e-10 1.0000e+00 hypermethylated 1.8638e-08 1.0000000 hypermethylated 0.360306 3.5198e-07 hypermethylated 3.1998e-05 hypermethylated 0.54111 0.650502 1.2139e-02 7 0.34699 0.344888 0.00209933 2.3162e-01 0.963394 insignificant 1.0000e+00 1 insignificant 4.7103e-01 0.999220 insignificant 1.0000e+00 1 insignificant 0.0213700 7.3136e-01 insignificant 1.00000000 insignificant 0.0301612 0.650794 -0.6150696 7 0.1303643 0.38342 -0.2530601 1.0000e+00 9.7581e-16 hypomethylated 1.00000000 8.8710e-14 hypomethylated 1.0000e+00 2.8636e-05 hypomethylated 1.0000000 2.2028e-03 hypomethylated -3.3894e-01 1.5024e-03 weaklyHypometh 0.06260205 weaklyHypometh chr9 130430873 130431873 97815 SPTAN1 ENSG00000197694 0.91370 437 11 0.86357 367 11 0.88181 306 11 0.95235 403 11 0.94600 201 11 0.88537 361 10 0.90367 214 11 0.90697 301 10 0.87520 330 11 0.92961 314 11 0.91539 517 12 0.78153 173 9 0.964913 363 11 0.93454 184 7 0.93789 317 11 0.88900 160 6 0.69583 95 8 0.88098 602 11 0.92836 456 11 0.931931 294 12 0.93465 214 10 0.799872 154 7 0.87311 217 11 0.96489 177 11 0.95405 304 9 0.93894 525 11 0.85701 230 11 0.80920 168 6 0.86751 417 10 0.960923 597 12 0.920988 773 12 0.96180 433 11 0.7602594 362 12 0.8201992 284 11 0.6747358 333 11 0.934463 101 5 0.699848 223 11 0.842099 360 10 0.961060 254 9 0.937496 340 11 0.914646 281 9 0.968885 329 8 0.858854 270 8 0.89172 0.93182 0.86331 0.91223 0.93472 0.88121 0.88896 0.87875 0.87820 0.90329 0.91562 0.89551 0.945681 0.92299 0.94634 0.828276 0.91716 0.92963 0.920308 0.924730 0.88296 0.836624 0.90212 0.96710 0.93650 0.93794 0.81626 0.97266 0.86772 0.957156 0.956875 0.93126 0.8813737 0.8872040 0.5956028 0.9157294 0.8804005 0.926584 0.956181 0.928396 0.911177 0.962754 0.886675 5 0.91710 0.92891 -0.01063432 11 0.91511 0.92854 -0.01343358 0.9589853 0.2971943 insignificant 1 1.00000 insignificant 0.893443 0.2489313 insignificant 1 1 insignificant -0.00764736 0.7333985 insignificant 1 insignificant 0.91712 0.8067429 0.084411 11 0.91703 0.7794501 0.1375812 2.4704e-08 2.7171e-01 weaklyHypermeth 3.7430e-07 1.0000e+00 weaklyHypermeth 5.3658e-02 2.9455e-01 insignificant 5.3888e-01 1.00000000 insignificant 0.10733024 4.0945e-02 weaklyHypermeth 4.8171e-01 insignificant 0.91710 0.935550 -0.0171270 10 0.91511 0.927516 -0.0124081 9.6876e-01 0.272862 insignificant 1.0000e+00 1 insignificant 9.6708e-01 0.084072 insignificant 1.0000e+00 1 insignificant -0.03225722 2.1644e-01 insignificant 1.0000e+00 insignificant 0.92891 0.8069964 0.10829250 11 0.92854 0.7843585 0.14418309 1.7171e-07 8.1421e-01 weaklyHypermeth 2.9605e-06 1.0000e+00 weaklyHypermeth 7.2578e-02 4.8412e-01 insignificant 6.4228e-01 1.0000000 insignificant 0.114978 3.2202e-02 weaklyHypermeth 3.8798e-01 insignificant 0.92891 0.935550 -6.0003e-03 10 0.92854 0.927516 0.00102553 7.5612e-01 0.335926 insignificant 1.0000e+00 1 insignificant 8.3595e-01 0.182200 insignificant 1.0000e+00 1 insignificant -0.0246099 3.7043e-01 insignificant 1.00000000 insignificant 0.8069964 0.935550 -0.0782093 10 0.7843585 0.92752 -0.1431576 7.6880e-01 1.6189e-03 weaklyHypometh 1.00000000 2.6539e-02 weaklyHypometh 7.2717e-01 3.0770e-02 weaklyHypometh 1.0000000 4.7339e-01 insignificant -1.3959e-01 1.5190e-02 weaklyHypometh 0.30380298 insignificant chr9 130812713 130813713 97817 NUP188 ENSG00000095319 0.85556 70 8 0.69901 186 6 0.93909 87 9 0.84444 17 2 0.83333 11 1 0.85812 36 3 0.00000 5 0 0.98095 64 5 0.70833 23 2 1.00000 12 0 0.93316 106 5 1.00000 2 0 0.902692 120 5 NA 0 0 0.71667 14 0 0.00000 1 0 0.40000 7 0 0.88889 30 3 0.92035 75 5 0.883041 54 4 0.88879 38 5 1.000000 20 1 1.00000 35 5 NA 0 0 0.90000 12 0 0.93300 256 9 0.87111 35 4 0.00000 3 0 0.96949 103 5 0.948852 312 9 0.946582 408 9 0.80076 74 6 0.9295575 104 5 0.8674825 103 5 1.0000000 104 5 NA 0 0 0.660000 14 1 0.972723 257 8 0.855556 17 1 0.831481 63 4 0.888889 13 0 0.854167 24 2 1.000000 19 0 0.87500 0.89275 0.96875 0.80000 1.00000 0.96154 0.00000 0.95238 0.93750 1.00000 0.98387 1.00000 0.968719 NA 0.75000 NA 1.00000 1.00000 0.956439 0.973684 0.82197 1.000000 1.00000 NA 1.00000 0.96475 0.94444 0.47860 0.92372 0.945614 0.944079 0.87010 0.9500000 0.9090909 0.9765152 NA 0.9000000 0.964376 0.900000 0.866667 1.000000 0.916667 1.000000 0 0.89891 0.94059 -0.04137482 2 0.89064 0.93419 -0.04355193 0.9110200 0.0534324 lowCoverage 1 1.00000 lowCoverage 0.208644 0.1108613 lowCoverage 1 1 lowCoverage -0.08570882 0.4452878 lowCoverage 1 lowCoverage 0.89891 0.9432990 -0.029126 2 0.89064 0.9212073 -0.0305679 9.2375e-01 1.2156e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3384e-01 4.1394e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.12997199 1.7744e-01 lowCoverage 1.0000e+00 lowCoverage 0.89891 0.889706 0.0258959 1 0.89064 0.867936 0.0227036 4.2109e-01 0.241459 lowCoverage 1.0000e+00 1 lowCoverage 9.7113e-01 0.173702 lowCoverage 1.0000e+00 1 lowCoverage -0.13003783 9.7852e-02 lowCoverage 1.0000e+00 lowCoverage 0.94059 0.9432990 -0.00073212 5 0.93419 0.9212073 0.01298407 6.1580e-01 6.6471e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6310e-01 4.7173e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.044263 6.8071e-01 lowCoverage 1.0000e+00 lowCoverage 0.94059 0.889706 4.8901e-02 1 0.93419 0.867936 0.06625555 4.2680e-02 0.704391 lowCoverage 5.5429e-01 1 lowCoverage 9.8466e-01 0.056155 lowCoverage 1.0000e+00 1 lowCoverage -0.0443290 6.3513e-01 lowCoverage 1.00000000 lowCoverage 0.9432990 0.889706 0.0496213 1 0.9212073 0.86794 0.0532715 3.4409e-01 6.4568e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 9.8181e-01 4.3700e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -6.5848e-05 9.9926e-01 lowCoverage 1.00000000 lowCoverage chr9 131055922 131056922 97820 ENSG00000220992 0.61844 443 7 0.38879 143 7 0.39966 181 7 0.58639 309 7 0.56526 125 7 0.77867 261 7 0.47816 162 7 0.68512 151 7 0.58392 126 7 0.73638 98 7 0.51915 239 7 0.65608 89 7 0.471846 162 7 0.59722 38 2 0.65660 178 7 0.58382 104 6 0.61920 63 6 0.38035 492 7 0.50133 158 7 0.698361 304 7 0.60247 68 6 0.491139 225 7 0.64836 190 7 0.58247 88 7 0.51202 290 7 0.74293 164 7 0.55708 124 7 0.59133 54 6 0.51280 123 7 0.607889 171 7 0.583683 260 7 0.66003 322 7 0.0583544 194 7 0.2879054 204 7 0.0000000 12 0 0.421415 250 7 0.175105 128 7 0.111240 344 7 0.459305 243 7 0.488132 350 7 0.504138 338 7 0.558180 417 7 0.427833 243 7 0.64302 0.39387 0.46531 0.60664 0.63016 0.75179 0.49742 0.62086 0.49290 0.66237 0.58339 0.66558 0.470728 0.60380 0.64224 0.622231 0.61953 0.45187 0.536887 0.584302 0.55852 0.497439 0.54320 0.57402 0.58539 0.67780 0.39958 0.53003 0.52976 0.621299 0.561327 0.59128 0.0656189 0.2609094 0.1356736 0.3087228 0.2089068 0.093010 0.466354 0.578955 0.463397 0.574364 0.454182 7 0.58231 0.57700 -0.00358178 7 0.61563 0.59250 0.02313081 0.8108041 0.1487208 insignificant 1 1.00000 insignificant 0.618092 0.4454222 insignificant 1 1 insignificant -0.01577893 0.6317426 insignificant 1 insignificant 0.58220 0.1766784 0.401360 7 0.61563 0.2095028 0.4061296 3.9960e-30 9.9997e-01 hypermethylated 2.6640e-28 1.0000e+00 hypermethylated 1.3573e-12 1.0000e+00 hypermethylated 1.2339e-10 1.00000000 hypermethylated 0.39956757 7.7075e-04 hypermethylated 2.2022e-02 hypermethylated 0.58198 0.561635 0.0333986 7 0.55221 0.554504 -0.0022941 3.6871e-03 0.680092 weaklyHypermeth 6.1452e-02 1 weaklyHypermeth 2.1830e-02 0.924214 weaklyHypermeth 3.6999e-01 1 insignificant 0.08771998 1.8849e-02 weaklyHypermeth 5.2192e-01 insignificant 0.57727 0.1768347 0.40142655 7 0.64188 0.2269614 0.41491538 1.5207e-19 1.0000e+00 hypermethylated 7.6037e-18 1.0000e+00 hypermethylated 1.9941e-10 1.0000e+00 hypermethylated 1.8638e-08 1.0000000 hypermethylated 0.415346 7.7935e-04 hypermethylated 2.3237e-02 hypermethylated 0.57709 0.561635 4.2669e-02 7 0.62435 0.554504 0.06985031 2.8683e-02 0.924101 weaklyHypermeth 4.0398e-01 1 insignificant 7.1149e-02 0.912191 insignificant 9.7465e-01 1 insignificant 0.1034989 5.4456e-03 weaklyHypermeth 0.36890111 insignificant 0.1767318 0.561635 -0.3614693 7 0.2655781 0.55450 -0.2889258 1.0000e+00 1.4059e-11 hypomethylated 1.00000000 9.3726e-10 hypomethylated 9.9996e-01 1.3600e-06 hypomethylated 1.0000000 1.5111e-04 hypomethylated -3.1185e-01 3.3661e-03 weaklyHypometh 0.10858368 insignificant chr9 131188611 131189611 97822 ENSG00000219220 0.74896 45 4 0.84323 108 5 0.77991 50 5 0.76515 25 2 0.73862 45 5 0.84421 73 4 0.87518 40 4 0.76462 98 5 0.85222 57 4 0.88545 45 4 0.86484 166 5 0.80833 29 3 0.873440 80 5 0.92308 27 2 0.79701 44 3 0.51923 15 1 0.85641 27 3 0.66481 66 3 0.89561 135 5 0.764652 79 4 0.95556 43 5 0.883077 21 2 0.76593 82 4 0.89574 60 5 0.90067 112 2 0.84510 135 5 0.78279 80 4 0.72222 25 3 0.58192 136 4 0.826437 146 5 0.695713 224 5 0.82643 91 5 0.2943978 122 5 0.2761985 134 5 1.0000000 9 1 0.500000 10 0 0.714583 61 5 0.856253 127 4 0.644841 30 4 0.754167 43 4 0.725694 27 3 0.481579 44 4 0.783333 18 1 0.80931 0.82823 0.65293 0.75866 0.66638 0.80615 0.79437 0.74739 0.76885 0.84416 0.81394 0.70982 0.850240 0.87152 0.75809 0.601089 0.77855 0.60239 0.843998 0.748234 0.92063 0.754670 0.73744 0.88478 0.80805 0.85127 0.78868 0.67460 0.83596 0.852973 0.873781 0.84566 0.3011079 0.3487398 0.5308270 0.3516640 0.6011905 0.911416 0.594388 0.719643 0.718006 0.485526 0.708333 1 0.79665 0.82842 -0.02314898 4 0.84183 0.81557 0.02625741 0.3533270 0.1280443 lowCoverage 1 1.00000 lowCoverage 0.814635 0.1044098 lowCoverage 1 1 lowCoverage -0.00354901 0.9235281 lowCoverage 1 lowCoverage 0.79665 0.5334773 0.273008 5 0.84183 0.5890019 0.2528278 5.8214e-10 1.0000e+00 hypermethylated 1.0037e-08 1.0000e+00 hypermethylated 4.1535e-03 1.0000e+00 weaklyHypermeth 5.4652e-02 1.00000000 weaklyHypermeth 0.19634328 1.7034e-01 lowCoverage 1.0000e+00 lowCoverage 0.79567 0.641975 0.1451288 4 0.81020 0.720565 0.0896309 2.8718e-05 0.977882 lowCoverage 7.5574e-04 1 lowCoverage 7.2211e-03 0.926358 lowCoverage 1.4737e-01 1 lowCoverage 0.12532581 8.0981e-02 lowCoverage 1.0000e+00 lowCoverage 0.82842 0.5334773 0.29954119 4 0.81557 0.5890019 0.22657039 2.9617e-07 9.9846e-01 lowCoverage 4.7769e-06 1.0000e+00 lowCoverage 5.3802e-03 9.9375e-01 lowCoverage 6.8103e-02 1.0000000 lowCoverage 0.199892 1.6618e-01 lowCoverage 1.0000e+00 lowCoverage 0.82855 0.641975 1.8833e-01 4 0.81869 0.720565 0.09812196 7.9885e-06 0.949630 lowCoverage 2.6628e-04 1 lowCoverage 1.0855e-03 0.968908 lowCoverage 2.8566e-02 1 lowCoverage 0.1288748 7.8672e-02 lowCoverage 1.00000000 lowCoverage 0.5314534 0.641975 -0.1011691 4 0.5068023 0.72056 -0.2137625 9.9078e-01 8.0760e-02 lowCoverage 1.00000000 7.9960e-01 lowCoverage 9.8781e-01 2.3287e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -7.1017e-02 6.1171e-01 lowCoverage 1.00000000 lowCoverage chr9 131253246 131254246 97824 ENSG00000219220 0.65562 263 6 0.54953 295 8 0.79490 351 8 0.71174 262 8 0.76261 197 8 0.65360 329 6 0.63352 205 8 0.69330 286 8 0.60782 236 8 0.57679 313 8 0.58198 270 8 0.60746 57 4 0.657291 145 6 0.52107 111 8 0.67208 394 8 0.62808 145 6 0.28667 16 2 0.58196 306 6 0.82865 524 8 0.639408 297 8 0.67835 144 8 0.308854 163 8 0.61298 193 8 0.46888 159 8 0.73531 122 8 0.81987 475 8 0.79281 389 8 0.43893 106 6 0.75085 493 8 0.763534 288 8 0.689187 290 8 0.87285 147 8 0.4775967 282 8 0.1696822 278 8 0.1984127 355 6 0.504209 47 4 0.206240 172 8 0.278036 244 8 0.502962 200 6 0.497838 223 8 0.536866 190 6 0.380034 199 6 0.550137 142 6 0.63107 0.56351 0.72831 0.68835 0.75317 0.74938 0.78038 0.72667 0.59982 0.62686 0.72245 0.61543 0.666915 0.52979 0.74656 0.673883 0.57780 0.61573 0.791319 0.749121 0.75736 0.309957 0.64041 0.66061 0.70221 0.77435 0.72624 0.78312 0.78342 0.825606 0.785533 0.85983 0.5115685 0.1239202 0.0106417 0.5118305 0.1925309 0.224001 0.469130 0.496035 0.593309 0.335734 0.498630 6 0.69492 0.73558 -0.04321829 8 0.57099 0.57515 -0.00416027 0.9513396 0.0253388 weaklyHypometh 1 1.00000 insignificant 0.988426 0.0058231 weaklyHypometh 1 1 insignificant -0.02882947 0.6115934 insignificant 1 insignificant 0.69506 0.2219796 0.467793 8 0.61858 0.3228253 0.2957514 2.6686e-35 9.9994e-01 hypermethylated 2.6686e-33 1.0000e+00 hypermethylated 6.2013e-11 9.9999e-01 hypermethylated 4.4295e-09 1.00000000 hypermethylated 0.32650813 1.7007e-03 weaklyHypermeth 4.4755e-02 weaklyHypermeth 0.69632 0.463235 0.2268586 6 0.66105 0.486662 0.1743863 9.2968e-16 0.998597 hypermethylated 1.0330e-13 1 hypermethylated 1.1748e-07 0.956976 hypermethylated 8.5540e-06 1 hypermethylated 0.13863656 5.0265e-03 weaklyHypermeth 2.3936e-01 insignificant 0.73542 0.2213353 0.51926303 8 0.55788 0.2767074 0.28117381 1.6766e-22 9.9996e-01 hypermethylated 9.8626e-21 1.0000e+00 hypermethylated 3.6432e-09 1.0000e+00 hypermethylated 2.2770e-07 1.0000000 hypermethylated 0.355338 7.3192e-04 hypermethylated 2.2873e-02 hypermethylated 0.73690 0.462264 2.6157e-01 6 0.66103 0.437996 0.22303784 3.6606e-12 0.999924 hypermethylated 2.8158e-10 1 hypermethylated 7.3985e-07 0.990906 hypermethylated 9.2481e-05 1 hypermethylated 0.1674660 1.1314e-02 weaklyHypermeth 0.41125429 insignificant 0.2209217 0.462264 -0.2390016 6 0.2707237 0.43800 -0.1672722 9.9842e-01 2.0554e-07 hypomethylated 1.00000000 8.5640e-06 hypomethylated 9.9997e-01 1.3345e-04 hypomethylated 1.0000000 5.3379e-03 hypomethylated -1.8787e-01 2.6331e-02 weaklyHypometh 0.44402297 insignificant chr9 131302085 131303085 97826 ENSG00000204054 0.36196 449 7 0.43294 227 8 0.40538 202 8 0.39801 425 7 0.35926 102 7 0.47692 413 8 0.39491 176 8 0.35901 196 8 0.36916 180 8 0.27485 185 8 0.43286 335 8 0.44623 118 8 0.278426 312 8 NA 0 0 0.36426 309 8 0.49511 95 6 0.43446 112 8 0.35124 487 7 0.39855 199 8 0.347414 400 8 0.46151 118 8 0.267446 289 8 0.37511 276 8 0.33035 191 8 0.44633 153 7 0.29668 372 7 0.34562 227 8 0.37383 96 8 0.35604 162 8 0.266522 439 8 0.329784 500 8 0.40930 474 8 0.4217493 225 8 0.3356280 162 8 0.2240741 138 2 0.163393 82 6 0.339257 95 8 0.244025 270 8 0.173684 467 8 0.252375 502 8 0.318341 409 7 0.276832 488 8 0.285501 466 8 0.25737 0.33820 0.32358 0.24762 0.28307 0.35657 0.31808 0.28566 0.27246 0.19024 0.33602 0.38830 0.190274 NA 0.27416 0.384774 0.34616 0.26794 0.304484 0.235909 0.40273 0.135715 0.27100 0.24812 0.30134 0.23596 0.26561 0.27286 0.22916 0.187455 0.210879 0.33868 0.3237408 0.2862940 0.1340647 0.1346090 0.2459916 0.176936 0.091031 0.144893 0.162800 0.146383 0.181518 7 0.30841 0.28337 0.03571652 8 0.37327 0.34520 0.02807350 0.0103273 0.9688703 weaklyHypermeth 1 1.00000 insignificant 0.006246 0.9624154 weaklyHypermeth 1 1 insignificant 0.03359523 0.1500820 insignificant 1 insignificant 0.30841 0.2463918 0.045535 8 0.37327 0.3247894 0.0484808 7.8706e-03 9.2389e-01 weaklyHypermeth 7.2207e-02 1.0000e+00 weaklyHypermeth 4.4343e-03 9.9896e-01 weaklyHypermeth 5.6851e-02 1.00000000 weaklyHypermeth 0.10045092 4.6942e-02 weaklyHypermeth 5.1024e-01 insignificant 0.30841 0.189108 0.1485700 7 0.37327 0.256183 0.1170870 2.1059e-13 0.963020 weaklyHypermeth 1.4039e-11 1 weaklyHypermeth 1.2175e-11 0.873191 weaklyHypermeth 4.0582e-09 1 weaklyHypermeth 0.12712540 2.9198e-03 weaklyHypermeth 1.4599e-01 insignificant 0.28329 0.2458848 0.01624824 8 0.30684 0.2887017 0.01813984 2.6612e-01 5.0769e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1725e-01 9.6954e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.066856 1.5803e-01 insignificant 1.0000e+00 insignificant 0.28337 0.189108 1.1005e-01 7 0.34520 0.256183 0.08901346 3.3944e-06 0.990808 weaklyHypermeth 1.3056e-04 1 weaklyHypermeth 2.4045e-05 0.992385 weaklyHypermeth 1.3358e-03 1 weaklyHypermeth 0.0935302 1.3634e-02 weaklyHypermeth 0.42605919 insignificant 0.2463918 0.189108 0.0904308 7 0.3247894 0.25618 0.0686061 1.9910e-04 8.5816e-01 weaklyHypermeth 0.01244354 1.0000e+00 weaklyHypermeth 4.3967e-02 6.9447e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 2.6674e-02 5.7348e-01 insignificant 1.00000000 insignificant chr9 132086817 132087817 97833 FREQ ENSG00000107130 0.89570 297 9 0.84013 463 9 0.83050 442 9 0.95834 327 9 0.94384 312 9 0.93585 578 9 0.90557 527 9 0.88171 431 9 0.87895 496 9 0.89618 459 9 0.95960 525 9 0.83402 334 9 0.952933 429 9 0.94640 163 8 0.92007 483 9 0.87508 407 9 0.84958 171 8 0.91414 455 9 0.92869 398 9 0.931030 425 9 0.84535 131 9 0.916205 126 8 0.91468 365 9 0.94424 197 9 0.94689 104 7 0.94626 591 9 0.88759 206 9 0.84283 228 9 0.90689 594 9 0.933541 615 9 0.941452 823 9 0.91373 543 9 0.7603043 564 9 0.6836449 255 9 0.8761698 521 8 0.788889 48 4 0.798132 319 9 0.765078 577 9 0.902424 449 9 0.924558 301 9 0.932712 257 8 0.952935 223 9 0.933573 275 8 0.91448 0.86174 0.87027 0.95516 0.93389 0.93637 0.91892 0.90771 0.91067 0.93642 0.96823 0.86547 0.959613 0.94579 0.93833 0.902947 0.90266 0.93053 0.942577 0.946183 0.95069 0.923600 0.93606 0.94015 0.94612 0.94905 0.91777 0.93197 0.92064 0.946991 0.939612 0.91930 0.8058467 0.7035712 0.8698042 0.8547114 0.8248581 0.819669 0.920015 0.954223 0.928814 0.950296 0.936769 8 0.91726 0.93146 -0.01530878 9 0.88722 0.83290 0.05432324 0.5586875 0.1355802 insignificant 1 1.00000 insignificant 0.756278 0.1215823 insignificant 1 1 insignificant -0.00772247 0.5899323 insignificant 1 insignificant 0.91735 0.7692644 0.147027 9 0.91173 0.7677460 0.1439818 1.8905e-15 9.6230e-01 weaklyHypermeth 5.1094e-14 1.0000e+00 weaklyHypermeth 1.6957e-07 9.7530e-01 weaklyHypermeth 5.8472e-06 1.00000000 weaklyHypermeth 0.12521346 3.0850e-03 weaklyHypermeth 6.8555e-02 weaklyHypermeth 0.91735 0.927575 -0.0069431 9 0.91173 0.918756 -0.0070279 7.9983e-01 0.299535 insignificant 1.0000e+00 1 insignificant 8.9066e-01 0.217726 insignificant 1.0000e+00 1 insignificant -0.02532385 5.9756e-02 insignificant 9.4017e-01 insignificant 0.93187 0.7692644 0.16221386 9 0.92544 0.7677460 0.15769669 1.5252e-13 9.4608e-01 weaklyHypermeth 4.4859e-12 1.0000e+00 weaklyHypermeth 3.2212e-06 9.8830e-01 weaklyHypermeth 9.0959e-05 1.0000000 weaklyHypermeth 0.132936 2.1308e-03 weaklyHypermeth 5.3270e-02 weaklyHypermeth 0.93187 0.927575 -9.9168e-06 9 0.92544 0.918756 0.00668702 2.3556e-01 0.613971 insignificant 1.0000e+00 1 insignificant 5.9160e-01 0.788603 insignificant 1.0000e+00 1 insignificant -0.0176014 2.0749e-01 insignificant 1.00000000 insignificant 0.7692644 0.927575 -0.1126439 9 0.7677460 0.91876 -0.1510097 9.8943e-01 4.1545e-06 weaklyHypometh 1.00000000 1.2983e-04 weaklyHypometh 9.8964e-01 8.0391e-05 weaklyHypometh 1.0000000 4.2196e-03 weaklyHypometh -1.5054e-01 1.3605e-03 weaklyHypometh 0.05915060 weaklyHypometh chr9 132096555 132097555 97835 FREQ ENSG00000107130 0.93026 411 6 0.68860 177 6 0.94336 72 3 0.97773 353 6 0.77778 58 4 0.95556 395 6 0.85137 101 6 0.97495 115 7 0.88070 68 6 0.99107 39 1 0.92143 247 7 0.82051 21 1 0.990741 52 1 0.87500 33 1 0.99153 63 1 0.66667 26 2 NA 0 0 0.96574 442 6 0.94240 248 6 0.839163 245 6 0.66276 49 2 0.979167 46 1 0.78692 154 7 0.66224 61 5 0.71578 236 6 0.95373 233 6 0.74716 71 4 0.96471 25 1 0.73499 217 6 0.979159 224 5 0.986833 331 7 0.96755 245 6 0.9070224 155 6 0.7242844 155 5 0.7000000 34 2 0.804605 165 6 0.623867 96 7 0.600323 235 6 0.795870 329 6 0.957425 241 6 0.890593 296 6 0.955267 364 6 0.841439 236 6 0.93350 0.88341 0.94688 0.96425 1.00000 0.92628 0.89923 0.94293 0.89142 0.94968 0.92031 0.93445 0.955273 1.00000 0.96855 0.991556 NA 0.96012 0.957099 0.975949 0.95202 0.899364 0.89202 0.93962 0.92960 0.89316 0.98170 0.85679 0.91838 0.946863 0.986048 0.93241 0.9642256 0.3925783 0.5435778 0.9786625 0.7910149 0.849567 0.906401 0.948346 0.921475 0.963497 0.913479 1 0.94315 0.93869 0.00041265 6 0.67542 0.70674 -0.03132545 0.6200311 0.6254614 insignificant 1 1.00000 insignificant 0.672378 0.9295776 insignificant 1 1 insignificant 0.04884050 0.2972661 lowCoverage 1 lowCoverage 0.94344 0.7607143 0.177550 6 0.74296 0.5976311 0.1453282 6.2043e-08 1.0000e+00 weaklyHypermeth 8.8634e-07 1.0000e+00 weaklyHypermeth 1.6169e-04 9.6010e-01 weaklyHypermeth 2.8873e-03 1.00000000 weaklyHypermeth 0.16724017 1.3472e-02 lowCoverage 2.2453e-01 lowCoverage 0.94369 0.938608 0.0013949 6 0.74218 0.789544 -0.0473666 4.2374e-01 0.557511 insignificant 1.0000e+00 1 insignificant 2.1806e-01 0.987155 insignificant 1.0000e+00 1 insignificant 0.00580490 8.8484e-01 lowCoverage 1.0000e+00 lowCoverage 0.93919 0.7607143 0.17649100 6 0.77742 0.5976311 0.17978616 4.1954e-05 9.9730e-01 weaklyHypermeth 5.6695e-04 1.0000e+00 weaklyHypermeth 7.1687e-04 7.2519e-01 weaklyHypermeth 1.3526e-02 1.0000000 weaklyHypermeth 0.118400 7.7435e-02 lowCoverage 8.1511e-01 lowCoverage 0.93915 0.938608 4.4407e-03 6 0.75269 0.789544 -0.03685774 2.8633e-01 0.745456 insignificant 1.0000e+00 1 insignificant 1.3141e-01 0.943811 insignificant 1.0000e+00 1 insignificant -0.0430356 4.0927e-01 lowCoverage 1.00000000 lowCoverage 0.7634409 0.938608 -0.1751466 6 0.6640346 0.78954 -0.1255090 1.0000e+00 1.6041e-02 weaklyHypometh 1.00000000 2.1107e-01 insignificant 9.9954e-01 8.3825e-02 insignificant 1.0000000 1.0000e+00 insignificant -1.6144e-01 2.0225e-02 weaklyHypometh 0.37880163 insignificant chr9 132097313 132098313 97836 FREQ ENSG00000107130 0.95593 392 6 0.80679 346 9 0.75156 135 7 0.97077 419 5 0.81472 134 9 0.81136 514 8 0.90425 175 9 0.80182 240 8 0.76797 141 10 0.86210 100 5 0.76414 327 9 0.78199 45 2 0.868065 155 7 0.82732 71 6 0.95498 111 5 0.66422 34 2 0.54167 19 2 0.81511 490 7 0.78838 243 6 0.930516 333 6 0.68750 73 4 0.953131 77 3 0.90195 174 9 0.90682 94 8 0.90495 217 8 0.74571 355 8 0.80591 68 3 0.69019 71 4 0.85021 184 5 0.907967 366 8 0.976048 546 8 0.93418 323 8 0.6791270 226 9 0.4893170 147 8 0.7500000 129 2 0.682964 125 5 0.637193 146 8 0.629943 287 8 0.947159 317 6 0.926329 283 6 0.939016 249 6 0.941984 465 6 0.913797 308 8 0.94599 0.84008 0.81624 0.92991 0.92674 0.85042 0.81019 0.89550 0.79991 0.87205 0.85795 0.84585 0.919638 0.86836 0.87990 0.497745 0.87583 0.85480 0.874329 0.866488 0.98263 0.928276 0.87307 0.90880 0.88646 0.89899 0.89146 0.87599 0.92073 0.923224 0.950522 0.85416 0.8190203 0.5752375 0.9699416 0.7212352 0.7988486 0.804518 0.897251 0.899610 0.893848 0.892411 0.875968 2 0.88743 0.92033 -0.02727780 8 0.83092 0.81828 0.01263480 0.9060072 0.0097579 weaklyHypometh 1 0.90253 insignificant 0.883633 0.0742851 insignificant 1 1 insignificant -0.03619697 0.3358095 insignificant 1 insignificant 0.88733 0.7892250 0.100882 5 0.81401 0.6367406 0.1772703 1.9834e-15 9.9989e-01 weaklyHypermeth 5.2195e-14 1.0000e+00 weaklyHypermeth 1.5837e-05 1.0000e+00 weaklyHypermeth 3.4428e-04 1.00000000 weaklyHypermeth 0.17442587 2.3092e-03 weaklyHypermeth 5.3702e-02 weaklyHypermeth 0.89416 0.920469 -0.0273478 6 0.89828 0.930983 -0.0326990 9.9146e-01 0.013183 weaklyHypometh 1.0000e+00 1 insignificant 9.6452e-01 0.067307 insignificant 1.0000e+00 1 insignificant -0.11447354 8.3611e-05 weaklyHypometh 1.0451e-02 weaklyHypometh 0.92063 0.7892250 0.12699589 5 0.83345 0.6367406 0.19670532 3.2619e-14 9.9992e-01 weaklyHypermeth 1.0522e-12 1.0000e+00 weaklyHypermeth 5.7948e-06 9.9997e-01 weaklyHypermeth 1.4858e-04 1.0000000 weaklyHypermeth 0.210623 6.9939e-04 hypermethylated 2.2561e-02 hypermethylated 0.92277 0.920469 -8.8635e-04 5 0.91018 0.930983 -0.02080465 5.0138e-01 0.421195 insignificant 1.0000e+00 1 insignificant 4.9945e-01 0.377629 insignificant 1.0000e+00 1 insignificant -0.0782766 2.1273e-02 weaklyHypometh 0.54546697 insignificant 0.7952381 0.920469 -0.1255904 5 0.7074896 0.93098 -0.2234931 1.0000e+00 1.9195e-06 weaklyHypometh 1.00000000 6.6191e-05 weaklyHypometh 1.0000e+00 8.4393e-05 weaklyHypometh 1.0000000 4.2196e-03 weaklyHypometh -2.8890e-01 3.8242e-04 hypomethylated 0.02639266 hypomethylated chr9 132247434 132248434 97842 FREQ ENSG00000107130 0.71717 247 5 0.70078 90 5 0.75383 143 5 0.75979 293 5 0.78038 94 5 0.80391 321 5 0.86735 157 5 0.75844 170 5 0.67901 231 5 0.65119 213 5 0.73184 165 5 0.71756 108 5 0.691416 218 5 0.78374 120 5 0.75416 199 5 0.92534 113 4 0.54508 56 5 0.59563 313 5 0.79404 95 5 0.806822 208 5 0.76929 81 5 0.563916 111 5 0.79342 225 5 0.68141 57 5 0.77111 68 5 0.82201 155 5 0.55085 124 5 0.92375 62 5 0.72454 151 5 0.838717 129 5 0.759729 184 5 0.83176 236 5 0.6829412 130 5 0.5499221 107 5 0.6700000 71 5 0.478571 50 3 0.570101 149 5 0.723317 128 5 0.598387 276 5 0.597840 218 5 0.601918 265 5 0.527152 264 5 0.586994 234 5 0.69782 0.71502 0.76317 0.79351 0.81168 0.79662 0.84222 0.75731 0.68656 0.78618 0.74258 0.69721 0.695659 0.78312 0.76670 0.903310 0.60594 0.63395 0.774862 0.798695 0.80511 0.560762 0.79539 0.78618 0.78190 0.84307 0.62587 0.92327 0.86554 0.837766 0.781421 0.82863 0.7081868 0.6435221 0.6646048 0.5261414 0.7150190 0.793188 0.598138 0.579613 0.598330 0.521340 0.558006 5 0.74648 0.77827 -0.03166668 5 0.72159 0.62608 0.09550865 0.9972058 0.1229129 insignificant 1 1.00000 insignificant 0.968923 0.1389944 insignificant 1 1 insignificant -0.01166792 0.7565193 lowCoverage 1 lowCoverage 0.74641 0.6818898 0.064886 5 0.67519 0.5548656 0.1203204 1.2421e-02 3.8591e-01 weaklyHypermeth 1.1292e-01 1.0000e+00 insignificant 8.0110e-02 7.1728e-01 insignificant 7.5576e-01 1.00000000 insignificant 0.12839821 1.8098e-02 lowCoverage 2.6615e-01 lowCoverage 0.74676 0.554495 0.1757216 5 0.74356 0.579012 0.1645450 1.9593e-11 0.962898 weaklyHypermeth 1.0312e-09 1 weaklyHypermeth 1.1819e-07 0.992356 weaklyHypermeth 8.5540e-06 1 weaklyHypermeth 0.15841543 2.3764e-06 lowCoverage 4.7528e-04 lowCoverage 0.77925 0.6818898 0.09792980 5 0.73043 0.5548656 0.17556034 1.9783e-02 8.7784e-01 weaklyHypermeth 1.7507e-01 1.0000e+00 insignificant 1.8814e-02 9.3896e-01 weaklyHypermeth 2.0450e-01 1.0000000 insignificant 0.140066 1.5982e-02 lowCoverage 2.3933e-01 lowCoverage 0.77961 0.554495 2.0191e-01 5 0.77651 0.579012 0.19749951 1.1664e-07 0.999895 hypermethylated 5.8322e-06 1 hypermethylated 6.0463e-06 0.999774 hypermethylated 5.0386e-04 1 hypermethylated 0.1700833 2.1866e-04 weaklyHypermeth 0.03123764 weaklyHypermeth 0.6829653 0.554495 0.0992192 5 0.6658387 0.57901 0.0868271 4.9895e-03 8.9085e-01 weaklyHypermeth 0.26260276 1.0000e+00 insignificant 8.2708e-02 6.4836e-01 insignificant 1.0000000 1.0000e+00 insignificant 3.0017e-02 4.8919e-01 lowCoverage 1.00000000 lowCoverage chr9 132289552 132290552 97845 ENSG00000222116 0.82539 280 11 0.74115 270 12 0.79025 398 12 0.85401 292 11 0.72496 213 12 0.86052 430 10 0.82114 248 12 0.84323 313 12 0.71208 252 12 0.76137 343 11 0.81323 508 12 0.82174 136 7 0.846515 348 12 0.90889 250 11 0.77951 376 12 0.84838 137 5 0.77273 15 0 0.83142 363 12 0.88503 449 12 0.748963 353 12 0.84015 146 9 0.891468 171 10 0.78162 304 12 0.61618 160 9 0.87040 123 11 0.89711 391 12 0.73915 481 12 0.66489 187 9 0.83079 521 12 0.844869 392 12 0.782510 475 12 0.77242 417 12 0.7815618 289 12 0.8403429 335 12 0.8953007 206 9 0.917998 55 5 0.512048 278 13 0.895990 465 12 0.893408 314 12 0.880133 277 11 0.895225 261 11 0.835163 187 11 0.877086 298 12 0.89742 0.71426 0.81693 0.90639 0.90076 0.89492 0.84144 0.87742 0.85824 0.92817 0.91222 0.82586 0.878795 0.92538 0.90613 0.922325 0.70973 0.91091 0.928036 0.909246 0.85916 0.862555 0.90087 0.84066 0.88627 0.92005 0.85324 0.84238 0.91913 0.898802 0.907229 0.92846 0.8123069 0.8269657 0.8142595 0.9112918 0.7097437 0.920414 0.902986 0.900283 0.923478 0.892278 0.848184 5 0.87563 0.88582 -0.00727078 12 0.72582 0.76083 -0.03500847 0.8290787 0.4301058 insignificant 1 1.00000 insignificant 0.731038 0.4494047 insignificant 1 1 insignificant 0.01522948 0.5935142 insignificant 1 insignificant 0.87582 0.8137677 0.059636 12 0.72394 0.7034879 0.0204498 7.1736e-02 9.6718e-01 insignificant 5.7389e-01 1.0000e+00 insignificant 6.8175e-01 9.4799e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00231851 9.7221e-01 insignificant 1.0000e+00 insignificant 0.87689 0.878833 -0.0097153 12 0.73555 0.901747 -0.1661937 9.5504e-01 0.209388 insignificant 1.0000e+00 1 insignificant 9.6442e-01 0.064440 insignificant 1.0000e+00 1 insignificant -0.06667765 9.1383e-04 weaklyHypometh 6.0922e-02 weaklyHypometh 0.88587 0.8132678 0.06982662 12 0.72320 0.6699884 0.05321621 2.4587e-03 9.9998e-01 weaklyHypermeth 2.4343e-02 1.0000e+00 weaklyHypermeth 2.8357e-01 9.9943e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.012911 8.5357e-01 insignificant 1.0000e+00 insignificant 0.89110 0.878833 -2.9955e-03 12 0.87381 0.901747 -0.02793560 9.3440e-01 0.305769 insignificant 1.0000e+00 1 insignificant 6.5898e-01 0.178081 insignificant 1.0000e+00 1 insignificant -0.0819071 9.8416e-03 weaklyHypometh 0.41125429 insignificant 0.8176179 0.878743 -0.0734432 12 0.8026017 0.89473 -0.0921271 9.9857e-01 2.6351e-03 weaklyHypometh 1.00000000 4.2502e-02 weaklyHypometh 9.9439e-01 8.7521e-02 insignificant 1.0000000 1.0000e+00 insignificant -6.8996e-02 3.2299e-01 insignificant 1.00000000 insignificant chr9 132337426 132338426 97846 ENSG00000208562 0.80340 392 16 0.73850 372 16 0.80348 303 16 0.80305 398 15 0.88052 169 14 0.82543 536 16 0.88645 283 14 0.78097 325 16 0.83026 374 16 0.83958 247 16 0.81638 465 16 0.75537 211 13 0.717907 380 16 0.79148 109 10 0.86561 256 15 0.80980 206 14 0.53094 136 10 0.76918 617 14 0.75768 382 16 0.820189 444 16 0.76682 187 14 0.630327 257 14 0.84163 389 16 0.80446 291 15 0.83600 176 15 0.83316 410 16 0.73994 273 16 0.75299 227 15 0.78645 305 16 0.837277 431 16 0.775395 566 16 0.86857 583 16 0.7645886 307 16 0.8548431 300 15 0.7115385 346 9 0.500215 173 12 0.730050 296 16 0.820330 365 16 0.574562 447 16 0.775126 382 16 0.628954 294 12 0.749737 492 13 0.733115 368 16 0.78583 0.79275 0.79121 0.76734 0.84157 0.80005 0.88421 0.75120 0.82211 0.82017 0.80949 0.75689 0.658227 0.76563 0.83749 0.823826 0.58902 0.75650 0.742990 0.792329 0.80911 0.590397 0.81581 0.80368 0.77833 0.82476 0.72073 0.78394 0.75862 0.790488 0.735292 0.84991 0.7066715 0.8334991 0.7529914 0.5396880 0.7439424 0.812278 0.538780 0.731532 0.581937 0.728276 0.679245 10 0.78304 0.79976 -0.00877740 16 0.78923 0.75753 0.03170764 0.6514567 0.2259289 insignificant 1 1.00000 insignificant 0.323630 0.4387256 insignificant 1 1 insignificant 0.00189052 0.9405334 insignificant 1 insignificant 0.78304 0.7728036 0.010371 16 0.78923 0.7602374 0.0289970 4.6580e-01 1.3827e-03 inconclusive 1.0000e+00 1.5363e-01 insignificant 4.0167e-01 1.3554e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.06104760 2.9842e-01 insignificant 1.0000e+00 insignificant 0.78310 0.658094 0.1253496 16 0.79689 0.695364 0.1015308 7.1273e-11 0.999998 weaklyHypermeth 3.3940e-09 1 weaklyHypermeth 3.0526e-08 0.999944 weaklyHypermeth 3.0526e-06 1 weaklyHypermeth 0.09900951 5.9503e-02 insignificant 9.4017e-01 insignificant 0.79976 0.7728036 0.01995058 16 0.75753 0.7602374 -0.00271065 6.7553e-01 8.6492e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7917e-01 2.3998e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.059157 3.1538e-01 insignificant 1.0000e+00 insignificant 0.80230 0.658094 1.3546e-01 16 0.80487 0.695364 0.10950807 5.2932e-09 1.000000 weaklyHypermeth 3.1136e-07 1 weaklyHypermeth 1.2599e-06 0.999999 weaklyHypermeth 1.1976e-04 1 weaklyHypermeth 0.0971190 6.3941e-02 insignificant 1.00000000 insignificant 0.7855518 0.658094 0.1129317 16 0.8077523 0.69536 0.1123881 2.7430e-06 1.0000e+00 weaklyHypermeth 0.00039186 1.0000e+00 weaklyHypermeth 7.8413e-04 9.9988e-01 weaklyHypermeth 0.0712844 1.0000e+00 weaklyHypermeth 3.7962e-02 5.6768e-01 insignificant 1.00000000 insignificant chr9 132343310 132344310 97847 ENSG00000208562 0.96402 58 4 0.89425 131 9 0.91355 166 6 0.82584 58 3 0.92482 151 7 0.86955 89 5 0.90653 208 8 0.84989 118 6 0.83967 146 5 0.98398 90 5 0.88262 253 9 0.94583 101 5 0.873456 117 5 0.80000 22 2 0.81921 142 5 0.96970 101 5 0.67644 99 4 0.43056 16 1 0.93931 167 4 0.779861 75 5 0.78672 88 5 0.499495 26 3 0.87386 70 5 0.74242 82 5 1.00000 8 0 0.88706 158 5 0.72897 70 5 0.77360 81 5 0.76501 87 5 0.917437 215 7 0.862496 229 9 0.92917 115 6 0.9179249 127 5 0.9354927 127 5 0.8571429 134 6 1.000000 2 0 0.728350 144 5 0.753085 119 5 0.283838 62 4 0.368687 74 4 0.486111 20 1 0.900000 10 0 0.683838 48 4 0.94254 0.69532 0.84403 0.78746 0.86718 0.91984 0.80192 0.80682 0.76199 0.95903 0.87167 0.96344 0.898220 0.77383 0.84708 0.968620 0.72637 0.57530 0.940449 0.875262 0.83264 0.555101 0.86887 0.88365 0.97079 0.80925 0.76318 0.84281 0.81829 0.920958 0.802735 0.91182 0.7924020 0.8872493 0.6226415 NA 0.8534961 0.689355 0.449400 0.564322 0.440252 0.811321 0.583229 0 0.87875 0.86401 0.00636986 5 0.88650 0.83550 0.05099547 0.7261418 0.9705256 insignificant 1 1.00000 insignificant 0.644952 0.9946929 insignificant 1 1 insignificant 0.04060066 0.3939042 insignificant 1 insignificant 0.87840 0.8648233 0.010348 5 0.87230 0.8758731 -0.0035768 6.0701e-01 1.2262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2463e-01 1.3924e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01087767 8.3809e-01 lowCoverage 1.0000e+00 lowCoverage 0.87866 0.593458 0.2753318 4 0.89033 0.546374 0.3439593 1.0169e-23 0.999987 lowCoverage 5.0847e-21 1 lowCoverage 7.4029e-03 0.999999 lowCoverage 1.4806e-01 1 lowCoverage 0.30995989 4.7613e-02 lowCoverage 8.7318e-01 lowCoverage 0.86529 0.8648233 0.01309955 5 0.84645 0.8758731 -0.02942063 7.1277e-01 1.3942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6696e-01 8.5949e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.051478 3.8882e-01 lowCoverage 1.0000e+00 lowCoverage 0.86535 0.587678 2.6191e-01 4 0.85164 0.505135 0.34650765 1.4165e-13 0.999928 lowCoverage 1.4165e-11 1 lowCoverage 1.4534e-02 0.999981 lowCoverage 2.6030e-01 1 lowCoverage 0.2693592 7.1145e-02 lowCoverage 1.00000000 lowCoverage 0.8648233 0.583732 0.2315249 4 0.8758731 0.39517 0.4807078 6.0096e-06 9.9820e-01 lowCoverage 0.00066773 1.0000e+00 lowCoverage 6.1983e-03 9.9698e-01 lowCoverage 0.4427356 1.0000e+00 lowCoverage 3.2084e-01 4.1798e-02 lowCoverage 0.58870290 lowCoverage chr9 132592583 132593583 97858 ENSG00000218774 0.66426 247 5 0.74148 124 5 0.68333 52 5 0.77061 178 5 0.72909 53 5 0.76837 192 5 0.70768 62 5 0.79319 77 5 0.72667 38 5 0.92500 32 3 0.77058 158 5 0.63667 25 3 0.617143 32 5 0.79563 30 3 0.69364 36 4 0.69167 25 2 NA 0 0 0.68976 151 5 0.77381 75 5 0.785983 120 5 0.54167 18 0 0.555556 9 0 0.61047 142 5 0.82500 40 5 0.81614 48 5 0.87048 87 5 0.80000 31 2 0.89333 18 1 0.78667 77 5 0.862574 107 5 0.844240 104 5 0.76723 134 5 0.7812771 109 5 0.7298701 43 5 0.5986288 99 5 0.333333 6 0 0.739532 85 5 0.818971 149 5 0.744369 215 5 0.771459 275 5 0.763384 177 5 0.568825 145 5 0.707863 207 5 0.66872 0.74380 0.68506 0.77354 0.73140 0.77218 0.71289 0.79856 0.72468 0.92695 0.77167 0.63636 0.624490 0.75680 0.69923 0.688312 NA 0.69401 0.776902 0.789766 0.65260 0.704385 0.61448 0.82955 0.81807 0.87322 0.80519 0.89351 0.79221 0.863756 0.847447 0.77051 0.7384466 0.7286220 0.6034596 0.5440650 0.7391965 0.820846 0.748326 0.776220 0.766709 0.574217 0.711702 0 0.74517 0.79387 -0.04161546 5 0.77976 0.64708 0.13268130 0.9743852 0.0982268 insignificant 1 1.00000 insignificant 0.958190 0.0656717 insignificant 1 1 insignificant -0.02947011 0.4637731 lowCoverage 1 lowCoverage 0.74517 0.7372709 0.026867 5 0.77976 0.7641651 0.0155940 3.5813e-03 1.7067e-01 weaklyHypermeth 3.4108e-02 1.0000e+00 weaklyHypermeth 1.1571e-02 1.3191e-01 weaklyHypermeth 1.3149e-01 1.00000000 insignificant 0.06804103 4.0288e-01 lowCoverage 1.0000e+00 lowCoverage 0.74502 0.727184 0.0136212 5 0.73571 0.720537 0.0151744 4.2177e-01 0.601354 insignificant 1.0000e+00 1 insignificant 2.9241e-01 0.826174 insignificant 1.0000e+00 1 insignificant 0.02379626 5.8041e-01 lowCoverage 1.0000e+00 lowCoverage 0.79387 0.7372709 0.06505209 5 0.64708 0.7641651 -0.11708726 2.3183e-04 8.1856e-01 weaklyHypermeth 2.6957e-03 1.0000e+00 weaklyHypermeth 2.6885e-03 7.3427e-01 weaklyHypermeth 3.8963e-02 1.0000000 weaklyHypermeth 0.097511 2.6866e-01 lowCoverage 1.0000e+00 lowCoverage 0.79582 0.727184 5.3863e-02 5 0.77649 0.720537 0.05595679 6.6496e-02 0.837617 insignificant 8.1093e-01 1 insignificant 5.1376e-03 0.982767 weaklyHypermeth 1.0703e-01 1 insignificant 0.0532664 3.2389e-01 lowCoverage 1.00000000 lowCoverage 0.7361963 0.727184 -0.0228155 5 0.7169981 0.72054 -0.0035385 6.1618e-02 3.0424e-02 weaklyHypometh 1.00000000 3.7025e-01 insignificant 6.7519e-02 3.5486e-03 weaklyHypometh 1.0000000 7.5501e-02 weaklyHypometh -4.4245e-02 6.0665e-01 lowCoverage 1.00000000 lowCoverage chr9 132821276 132822276 97864 FIBCD1 ENSG00000130720 0.89001 142 9 0.75691 197 8 0.75546 316 11 0.85095 264 13 0.85900 158 9 0.86932 369 11 0.80740 266 9 0.79792 189 9 0.86593 211 9 0.79198 197 9 0.84011 181 9 0.87143 124 8 0.719352 223 9 0.79587 134 9 0.82801 256 9 0.60648 89 9 0.64082 157 5 0.79074 212 9 0.87416 262 9 0.810321 265 9 0.80390 100 9 0.681850 110 8 0.86904 240 8 0.92858 114 6 0.97113 74 5 0.83932 377 13 0.75204 179 9 0.80234 103 9 0.81658 192 6 0.837218 429 13 0.838356 528 13 0.90570 363 10 0.5247826 280 11 0.5765024 183 9 0.6611606 305 9 0.750194 58 5 0.583680 172 9 0.686757 424 13 0.742487 267 9 0.701343 189 8 0.652281 175 9 0.784289 180 9 0.789972 231 9 0.85640 0.77021 0.71210 0.89611 0.87030 0.82614 0.80845 0.89735 0.86201 0.86329 0.85514 0.80574 0.734519 0.77707 0.81916 0.719430 0.61670 0.81551 0.830417 0.785956 0.80730 0.787778 0.86620 0.92081 0.94662 0.83308 0.71451 0.84181 0.77008 0.832540 0.815053 0.86855 0.5427023 0.4992247 0.6308024 0.7331029 0.6713184 0.606881 0.725443 0.717802 0.713546 0.788442 0.759917 6 0.82783 0.83909 -0.00907997 9 0.80231 0.78662 0.01569232 0.9538717 0.2455900 insignificant 1 1.00000 insignificant 0.992761 0.1769407 insignificant 1 1 insignificant -0.03606391 0.2122440 insignificant 1 insignificant 0.82783 0.5752461 0.224100 9 0.80231 0.5372819 0.2650264 1.3849e-16 9.9997e-01 hypermethylated 3.9567e-15 1.0000e+00 hypermethylated 4.1208e-06 9.9997e-01 hypermethylated 1.0844e-04 1.00000000 hypermethylated 0.17059586 2.2567e-03 weaklyHypermeth 5.3702e-02 weaklyHypermeth 0.82838 0.710173 0.1009034 9 0.84176 0.767352 0.0744065 5.9578e-09 0.675746 weaklyHypermeth 2.5511e-07 1 weaklyHypermeth 1.5643e-04 0.706055 weaklyHypermeth 5.5867e-03 1 weaklyHypermeth 0.06703421 6.3350e-02 insignificant 9.4502e-01 insignificant 0.83909 0.5752461 0.22783619 10 0.78662 0.5372819 0.24933404 1.1054e-16 1.0000e+00 hypermethylated 4.4215e-15 1.0000e+00 hypermethylated 4.2093e-07 1.0000e+00 hypermethylated 1.6173e-05 1.0000000 hypermethylated 0.206660 5.7170e-04 hypermethylated 1.9714e-02 hypermethylated 0.83939 0.710173 1.0932e-01 9 0.84280 0.767352 0.07545047 8.1686e-10 0.856602 weaklyHypermeth 5.4457e-08 1 weaklyHypermeth 2.3279e-05 0.902790 weaklyHypermeth 1.3358e-03 1 weaklyHypermeth 0.1030981 1.2996e-02 weaklyHypermeth 0.42352332 insignificant 0.5756510 0.710173 -0.1148575 9 0.5756591 0.76735 -0.1916931 2.8379e-01 9.6623e-06 weaklyHypometh 1.00000000 2.6877e-04 weaklyHypometh 5.8422e-01 2.7443e-02 weaklyHypometh 1.0000000 4.3560e-01 insignificant -1.0356e-01 3.9209e-02 weaklyHypometh 0.57538758 insignificant chr9 132827704 132828704 97865 FIBCD1 ENSG00000130720 0.74889 64 5 0.34120 52 5 0.61250 116 5 0.77778 9 0 0.77185 93 5 0.96667 20 3 0.86467 116 5 0.55455 24 1 0.65608 74 5 0.69682 45 5 0.74260 149 5 0.62939 123 5 0.233153 136 5 NA 0 0 0.52334 68 5 0.67848 144 5 0.41939 113 5 0.38667 18 2 0.52929 91 5 0.624206 35 4 0.73333 29 3 NA 0 0 0.97500 39 4 0.78333 18 1 0.00000 1 0 0.45333 57 5 0.75333 22 1 0.96000 31 5 0.43333 21 3 0.584444 67 5 0.594641 110 5 0.93212 54 5 0.0000000 101 5 0.0181818 120 5 0.0000000 109 5 0.000000 2 0 0.000000 28 4 0.000000 116 5 0.725000 28 2 0.650000 45 5 0.716667 13 0 0.277778 7 0 0.870000 20 2 0.80401 0.36051 0.56653 0.75926 0.74004 0.93056 0.83387 0.40530 0.68842 0.73990 0.73946 0.63170 0.225031 NA 0.48774 0.740830 0.31401 0.47685 0.532522 0.757716 0.75463 NA 1.00000 0.64583 0.41770 0.48981 0.73148 0.91667 0.51111 0.526235 0.500272 0.94885 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.000000 0.708333 0.537368 0.500000 0.291667 0.779167 0 0.60805 0.69042 -0.08211213 5 0.60549 0.69574 -0.09024275 0.9923675 0.0144405 weaklyHypometh 1 0.90253 insignificant 0.994786 0.0297575 weaklyHypometh 1 1 insignificant -0.03598928 0.7151438 lowCoverage 1 lowCoverage 0.60805 0.0042017 0.604291 5 0.60549 0.0047059 0.6007881 3.1145e-26 1.0000e+00 hypermethylated 1.9465e-24 1.0000e+00 hypermethylated 3.6278e-13 1.0000e+00 hypermethylated 4.4889e-11 1.00000000 hypermethylated 0.61578651 1.9669e-11 lowCoverage 4.9173e-09 lowCoverage 0.60805 0.672566 -0.0642516 2 0.60549 0.696160 -0.0906658 8.4751e-01 0.023127 lowCoverage 1.0000e+00 1 lowCoverage 8.4812e-01 0.030624 lowCoverage 1.0000e+00 1 lowCoverage -0.02907207 7.9736e-01 lowCoverage 1.0000e+00 lowCoverage 0.69042 0.0042017 0.68696450 5 0.69574 0.0047059 0.69103084 2.5688e-23 1.0000e+00 hypermethylated 1.7125e-21 1.0000e+00 hypermethylated 7.8605e-11 1.0000e+00 hypermethylated 8.7339e-09 1.0000000 hypermethylated 0.651776 2.0584e-05 lowCoverage 1.0292e-03 lowCoverage 0.69042 0.672566 1.7621e-02 2 0.69574 0.696160 -0.00042303 4.5004e-01 0.545854 lowCoverage 1.0000e+00 1 lowCoverage 4.4728e-01 0.497072 lowCoverage 1.0000e+00 1 lowCoverage 0.0069172 9.5922e-01 lowCoverage 1.00000000 lowCoverage 0.0042017 0.672566 -0.6694430 2 0.0047059 0.69616 -0.6914539 1.0000e+00 8.0130e-19 lowCoverage 1.00000000 1.6026e-16 lowCoverage 1.0000e+00 4.1752e-08 lowCoverage 1.0000000 6.9586e-06 lowCoverage -6.4486e-01 2.8804e-03 lowCoverage 0.09732624 lowCoverage chr9 133674786 133675786 97870 ENSG00000212395 0.84601 245 7 0.74527 307 7 0.83994 233 7 0.85484 229 7 0.87898 136 7 0.81919 399 7 0.85078 364 7 0.85467 217 7 0.87004 176 7 0.82702 180 7 0.76812 431 7 0.87221 120 7 0.815031 187 7 0.89076 149 7 0.83726 325 7 0.71939 54 6 0.00000 1 0 0.72942 176 7 0.82923 522 7 0.896159 379 7 0.70143 155 7 0.722658 98 7 0.86592 196 7 0.94555 141 7 0.97382 66 5 0.90671 335 7 0.84166 191 7 0.80887 75 7 0.77749 395 7 0.876853 404 7 0.862636 554 7 0.90633 384 7 0.1610548 341 7 0.1487629 256 7 0.2599717 391 6 0.000000 1 0 0.176617 350 7 0.219686 471 7 0.815703 264 7 0.782122 243 7 0.834227 131 7 0.734363 182 7 0.772524 133 7 0.83771 0.73856 0.82457 0.86792 0.88559 0.81528 0.84906 0.84826 0.86030 0.89687 0.87728 0.87720 0.817235 0.88900 0.83687 0.736025 NA 0.73731 0.816411 0.891420 0.88296 0.696427 0.84044 0.91759 0.96223 0.90379 0.84287 0.89950 0.78606 0.861552 0.839981 0.90296 0.1440620 0.1228280 0.1971309 NA 0.2181049 0.203308 0.821837 0.789346 0.836589 0.759134 0.727294 7 0.82940 0.84626 -0.01768285 7 0.71663 0.88927 -0.17263964 0.9831639 0.5552739 insignificant 1 1.00000 insignificant 0.999208 0.1238368 insignificant 1 1 insignificant -0.06194616 0.2194808 insignificant 1 insignificant 0.82947 0.1773481 0.666930 7 0.73537 0.1649923 0.5703735 7.1667e-64 1.0000e+00 hypermethylated 1.7917e-61 1.0000e+00 hypermethylated 1.3680e-14 1.0000e+00 hypermethylated 2.2799e-12 1.00000000 hypermethylated 0.62620071 9.1041e-10 hypermethylated 1.8208e-07 hypermethylated 0.82947 0.738720 0.0761553 7 0.73537 0.809531 -0.0741651 2.9841e-04 0.710478 weaklyHypermeth 6.3492e-03 1 weaklyHypermeth 1.1009e-02 0.637687 weaklyHypermeth 2.0772e-01 1 insignificant -0.00057179 9.9027e-01 insignificant 1.0000e+00 insignificant 0.84623 0.1773481 0.68587301 7 0.87900 0.1649923 0.71400302 4.0082e-47 1.0000e+00 hypermethylated 1.0020e-44 1.0000e+00 hypermethylated 1.0774e-14 1.0000e+00 hypermethylated 2.1548e-12 1.0000000 hypermethylated 0.688147 3.6244e-08 hypermethylated 6.0407e-06 hypermethylated 0.84613 0.738720 9.8873e-02 7 0.87900 0.809531 0.06946439 3.1754e-05 0.788432 weaklyHypermeth 9.6226e-04 1 weaklyHypermeth 8.2102e-04 0.952818 weaklyHypermeth 2.2190e-02 1 weaklyHypermeth 0.0613744 5.7778e-02 insignificant 1.00000000 insignificant 0.1774461 0.738445 -0.5987385 7 0.1885626 0.78232 -0.5937584 1.0000e+00 1.3626e-24 hypomethylated 1.00000000 6.8131e-22 hypomethylated 1.0000e+00 9.2595e-10 hypomethylated 1.0000000 1.8519e-07 hypomethylated -6.2677e-01 9.6228e-07 hypomethylated 0.00096228 hypomethylated chr9 134343535 134344535 97937 C9orf171 ENSG00000188523 0.78500 91 5 0.78926 140 5 0.76190 63 5 0.78190 64 5 0.76395 34 3 0.73838 98 6 0.83193 75 5 0.78958 139 5 0.97194 43 3 0.91891 57 3 0.84718 124 7 0.83796 31 3 0.965556 151 3 1.00000 6 0 0.65128 51 3 0.90000 9 0 0.88542 26 3 0.69265 52 3 0.84286 67 3 0.781443 96 3 0.91558 49 4 0.892857 23 3 0.97959 24 1 0.97500 29 4 0.79730 71 5 0.82544 147 6 0.80000 50 4 0.63333 26 3 0.71667 73 4 0.915561 148 6 0.928927 197 7 0.87673 135 7 0.5292722 146 6 0.4342030 87 5 0.3833333 76 4 0.382540 66 5 0.603691 53 7 0.531443 156 7 0.277407 93 3 0.587075 125 5 0.494339 72 3 0.873188 71 3 0.429509 100 5 0.89877 0.87737 0.93151 0.82759 0.73956 0.82232 0.89630 0.88936 0.94692 0.90547 0.90105 0.84209 0.928037 0.96740 0.80269 0.946348 0.92123 0.74230 0.865753 0.863746 0.91683 0.924658 0.93151 0.96526 0.85435 0.87196 0.89498 0.84449 0.89452 0.919429 0.948110 0.95995 0.6818040 0.6509516 0.4292291 0.7377473 0.5344049 0.343467 0.408945 0.622374 0.576003 0.803033 0.511367 1 0.85321 0.89588 -0.04423174 5 0.80796 0.85180 -0.04383913 0.8874336 0.0422387 weaklyHypometh 1 1.00000 insignificant 0.951887 0.2600463 insignificant 1 1 insignificant -0.02789403 0.4538369 lowCoverage 1 lowCoverage 0.85321 0.4982877 0.333102 5 0.80796 0.4824590 0.3255048 6.2713e-20 1.0000e+00 hypermethylated 2.5085e-18 1.0000e+00 hypermethylated 4.0247e-10 1.0000e+00 hypermethylated 2.5154e-08 1.00000000 hypermethylated 0.34944115 2.7341e-05 lowCoverage 1.1392e-03 lowCoverage 0.85321 0.579521 0.2966045 3 0.80796 0.493953 0.3140105 1.6635e-19 0.999983 lowCoverage 2.7725e-17 1 lowCoverage 2.3626e-08 1.000000 lowCoverage 2.6251e-06 1 lowCoverage 0.29455122 3.9365e-02 lowCoverage 8.1296e-01 lowCoverage 0.89588 0.4982877 0.37850469 6 0.85180 0.4824590 0.36934396 1.5013e-17 1.0000e+00 hypermethylated 6.8240e-16 1.0000e+00 hypermethylated 3.4841e-10 1.0000e+00 hypermethylated 2.4887e-08 1.0000000 hypermethylated 0.377335 5.6007e-06 lowCoverage 3.1115e-04 lowCoverage 0.89588 0.579521 3.3678e-01 3 0.85180 0.493953 0.35784958 2.8370e-17 1.000000 lowCoverage 5.6741e-15 1 lowCoverage 8.5375e-08 1.000000 lowCoverage 1.4229e-05 1 lowCoverage 0.3224452 2.8212e-02 lowCoverage 0.67230395 lowCoverage 0.4982877 0.579521 -0.0396288 3 0.4824590 0.49395 -0.0114944 8.0334e-01 5.9801e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 8.7121e-01 6.3444e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -5.4890e-02 6.2540e-01 lowCoverage 1.00000000 lowCoverage chr9 134343808 134344808 97938 C9orf171 ENSG00000188523 0.78500 91 5 0.75413 136 5 0.83333 60 5 0.74555 62 5 0.72460 33 3 0.69478 97 6 0.79832 72 5 0.75451 136 5 0.96726 40 3 0.90539 55 3 0.82171 118 6 0.83796 31 3 0.965556 151 3 1.00000 6 0 0.65128 51 3 0.87500 8 0 0.88542 26 3 0.69265 52 3 0.84286 67 3 0.745016 95 3 0.90152 48 4 0.892857 23 3 0.97619 20 1 0.96875 25 4 0.84685 67 5 0.79634 143 6 0.76667 49 4 0.63333 26 3 0.71667 73 4 0.901488 140 5 0.893391 188 6 0.95618 130 6 0.5758176 142 6 0.4342030 87 5 0.2291667 73 4 0.446296 62 5 0.537640 48 6 0.453350 150 6 0.323642 92 3 0.518254 124 5 0.574841 69 3 0.873188 71 3 0.389983 97 5 0.89877 0.87737 0.93151 0.82759 0.73956 0.82232 0.89630 0.88936 0.94692 0.90547 0.90105 0.84209 0.928037 0.96740 0.80269 0.946348 0.92123 0.74230 0.865753 0.863746 0.91683 0.924658 0.93151 0.96526 0.85435 0.87196 0.89498 0.84449 0.89452 0.919429 0.948110 0.95995 0.6818040 0.6509516 0.4292291 0.7377473 0.5344049 0.343467 0.408945 0.622374 0.576003 0.803033 0.511367 1 0.85148 0.89700 -0.04659246 5 0.78707 0.84903 -0.06196437 0.9446423 0.0224693 weaklyHypometh 1 1.00000 insignificant 0.988633 0.1708961 insignificant 1 1 insignificant -0.04016939 0.2983334 lowCoverage 1 lowCoverage 0.85148 0.4911032 0.334867 5 0.78707 0.4492325 0.3378364 6.7344e-20 9.9999e-01 hypermethylated 2.5901e-18 1.0000e+00 hypermethylated 7.5860e-10 1.0000e+00 hypermethylated 4.4624e-08 1.00000000 hypermethylated 0.36793790 2.2934e-04 lowCoverage 8.1907e-03 lowCoverage 0.85148 0.578366 0.2971585 3 0.78707 0.465168 0.3219011 2.6456e-19 0.999892 lowCoverage 3.7794e-17 1 lowCoverage 5.7583e-08 0.999997 lowCoverage 5.2348e-06 1 lowCoverage 0.27803512 4.1588e-02 lowCoverage 8.3176e-01 lowCoverage 0.89700 0.4911032 0.38651817 6 0.84903 0.4492325 0.39980081 7.6625e-18 1.0000e+00 hypermethylated 3.6488e-16 1.0000e+00 hypermethylated 2.4264e-10 1.0000e+00 hypermethylated 2.0220e-08 1.0000000 hypermethylated 0.408107 5.8942e-05 lowCoverage 2.4559e-03 lowCoverage 0.89700 0.578366 3.3908e-01 3 0.84903 0.465168 0.38386545 1.8054e-17 1.000000 lowCoverage 4.8816e-15 1 lowCoverage 6.2902e-08 1.000000 lowCoverage 1.2580e-05 1 lowCoverage 0.3182045 2.5695e-02 lowCoverage 0.64237765 lowCoverage 0.4911032 0.578366 -0.0405211 3 0.4492325 0.46517 -0.0159354 7.8889e-01 5.4662e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 8.6105e-01 5.5925e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -8.9903e-02 4.3386e-01 lowCoverage 1.00000000 lowCoverage chr9 134346779 134347779 97940 C9orf171 ENSG00000188523 0.95062 466 6 0.88642 185 6 0.82824 109 6 0.97343 397 4 0.92063 52 4 0.95557 406 6 0.84499 131 6 0.89657 106 6 0.88320 84 4 0.79286 30 3 0.90585 246 6 0.83333 19 0 0.888889 51 4 0.92500 28 2 0.83074 52 6 0.94444 11 0 NA 0 0 0.84675 407 4 0.90391 154 6 0.939692 407 6 0.90000 36 4 1.000000 4 0 0.95306 230 6 1.00000 42 4 0.90455 48 4 0.97293 179 6 0.87899 100 6 0.95000 64 6 0.88910 127 6 0.956364 191 6 0.942951 188 6 0.95610 309 6 0.4343266 202 6 0.3883848 98 6 0.8880208 227 4 NA 0 0 0.410387 100 6 0.471800 277 6 0.708009 369 6 0.705236 363 6 0.932176 483 4 0.666667 67 4 0.776116 377 6 0.93003 0.86380 0.82468 0.96338 0.89127 0.94448 0.85266 0.87513 0.88396 0.95056 0.91477 0.94444 0.851852 0.90889 0.87157 0.914815 NA 0.84745 0.925579 0.953123 0.92000 0.993062 0.91141 1.00000 0.89953 0.95659 0.86911 0.91056 0.91295 0.949091 0.949385 0.94824 0.4897048 0.5054648 0.8282986 NA 0.5468127 0.590133 0.824484 0.843426 0.908967 0.888889 0.863887 0 0.91051 0.92617 -0.01939785 6 0.80534 0.95556 -0.15021992 0.9979550 0.0074410 weaklyHypometh 1 0.82677 insignificant 0.999301 0.0052635 weaklyHypometh 1 1 insignificant -0.04983904 0.0056343 lowCoverage 1 lowCoverage 0.91078 0.5519912 0.332236 6 0.92039 0.4304696 0.4899216 9.5419e-34 1.0000e+00 hypermethylated 7.3399e-32 1.0000e+00 hypermethylated 1.8778e-06 1.0000e+00 hypermethylated 5.3651e-05 1.00000000 hypermethylated 0.37358016 1.5574e-02 lowCoverage 2.3959e-01 lowCoverage 0.91072 0.881254 0.0538190 6 0.90712 0.733523 0.1735999 2.3341e-11 0.979626 weaklyHypermeth 1.1671e-09 1 weaklyHypermeth 2.0670e-02 0.672036 weaklyHypermeth 3.5637e-01 1 insignificant 0.13452322 4.3898e-02 lowCoverage 8.4418e-01 lowCoverage 0.92612 0.5519912 0.39826744 6 0.94921 0.4304696 0.51874439 6.1344e-26 1.0000e+00 hypermethylated 5.5768e-24 1.0000e+00 hypermethylated 5.1573e-07 1.0000e+00 hypermethylated 1.8419e-05 1.0000000 hypermethylated 0.423419 1.0080e-02 lowCoverage 1.7538e-01 lowCoverage 0.92597 0.881254 8.9213e-02 6 0.94075 0.733523 0.20722650 7.7968e-13 0.996950 weaklyHypermeth 7.0880e-11 1 weaklyHypermeth 7.9199e-04 0.996636 weaklyHypermeth 2.2190e-02 1 weaklyHypermeth 0.1843623 1.5306e-02 weaklyHypermeth 0.45025221 insignificant 0.5526024 0.881254 -0.2600582 6 0.5022145 0.73352 -0.2313086 9.9975e-01 1.8165e-08 hypomethylated 1.00000000 9.0825e-07 hypomethylated 9.9987e-01 2.0889e-03 weaklyHypometh 1.0000000 5.2223e-02 weaklyHypometh -2.3906e-01 6.2959e-02 lowCoverage 0.81765327 lowCoverage chr9 134425680 134426680 97947 C9orf171 ENSG00000188523 0.86016 185 5 0.73323 143 6 0.71584 124 6 0.73040 248 6 0.58823 53 6 0.73135 302 6 0.85473 126 6 0.79713 108 6 0.61578 105 6 0.84272 182 6 0.78758 201 6 0.54845 72 5 0.455183 230 6 0.82089 72 6 0.78627 220 6 0.71429 21 2 0.68194 33 3 0.54479 296 6 0.58895 136 6 0.808363 247 6 0.73685 59 5 0.529517 141 6 0.87299 135 6 0.76250 89 5 0.77907 113 6 0.69432 142 6 0.79534 112 6 0.58214 37 3 0.80524 114 6 0.716964 168 6 0.680263 156 6 0.81813 270 6 0.3447899 150 6 0.5303922 103 6 0.8221154 105 1 0.368056 36 4 0.442167 156 6 0.364072 149 6 0.495754 258 6 0.611370 166 5 0.598389 191 5 0.497818 194 6 0.788861 212 6 0.87375 0.64283 0.69072 0.73215 0.71618 0.84947 0.86057 0.79136 0.68785 0.85284 0.77944 0.74529 0.424962 0.79918 0.79133 0.783898 0.73976 0.70422 0.682974 0.798175 0.84264 0.522776 0.84857 0.86881 0.78440 0.65476 0.82064 0.72397 0.78502 0.705017 0.649968 0.85513 0.3564845 0.4780907 0.4829156 0.3428672 0.4585190 0.362926 0.578305 0.541594 0.596207 0.590057 0.781305 5 0.72455 0.74154 -0.01179903 6 0.60272 0.68311 -0.08038397 0.9100577 0.2823771 insignificant 1 1.00000 insignificant 0.926774 0.2416373 insignificant 1 1 insignificant -0.02079735 0.5961567 insignificant 1 insignificant 0.72525 0.4434907 0.304908 6 0.68883 0.4146270 0.2742015 1.0635e-16 9.9999e-01 hypermethylated 3.1279e-15 1.0000e+00 hypermethylated 1.2948e-07 9.9981e-01 hypermethylated 4.9798e-06 1.00000000 hypermethylated 0.23171489 2.4386e-02 lowCoverage 3.2514e-01 lowCoverage 0.72569 0.607248 0.1251049 6 0.64121 0.539640 0.1015692 1.0283e-04 1.000000 weaklyHypermeth 2.2851e-03 1 weaklyHypermeth 5.7940e-04 0.999998 weaklyHypermeth 1.7041e-02 1 weaklyHypermeth 0.11187510 1.0853e-01 insignificant 1.0000e+00 insignificant 0.74217 0.4434907 0.31823705 6 0.70927 0.4146270 0.29464031 1.3751e-13 1.0000e+00 hypermethylated 4.1669e-12 1.0000e+00 hypermethylated 1.0142e-07 1.0000e+00 hypermethylated 4.8294e-06 1.0000000 hypermethylated 0.252512 1.7128e-02 lowCoverage 2.4907e-01 lowCoverage 0.74377 0.607248 1.3357e-01 6 0.72355 0.539640 0.18391279 1.2766e-04 0.999999 weaklyHypermeth 3.4503e-03 1 weaklyHypermeth 3.0603e-04 0.999999 weaklyHypermeth 1.2703e-02 1 weaklyHypermeth 0.1326725 6.8137e-02 insignificant 1.00000000 insignificant 0.4439655 0.608440 -0.1771609 6 0.4281759 0.62958 -0.2014043 9.9992e-01 9.6757e-06 weaklyHypometh 1.00000000 2.6877e-04 weaklyHypometh 9.9937e-01 4.7993e-04 weaklyHypometh 1.0000000 1.5482e-02 weaklyHypometh -1.1984e-01 2.2386e-01 lowCoverage 1.00000000 lowCoverage chr9 136359802 136360802 97972 RXRA ENSG00000186350 0.71002 222 8 0.63636 184 10 0.67054 187 11 0.56662 249 11 0.79969 120 10 0.51652 396 12 0.70068 140 13 0.68598 236 12 0.65662 198 7 0.79161 195 8 0.80608 282 13 0.80397 94 3 0.788076 181 5 0.62777 158 8 0.58114 160 5 0.71154 86 3 0.62500 27 3 0.50138 379 10 0.62885 178 9 0.704510 230 9 0.77355 122 9 0.430235 183 5 0.71008 197 9 0.53523 129 9 0.64889 458 13 0.72642 267 11 0.72691 191 12 0.81158 130 3 0.81478 201 10 0.649537 278 12 0.839629 346 13 0.76565 278 12 0.0703198 353 13 0.0403441 230 13 0.0769231 321 9 0.115385 151 11 0.100023 284 14 0.158839 356 13 0.381646 244 12 0.259526 238 11 0.320275 243 10 0.175056 302 5 0.265757 220 13 0.76371 0.74035 0.75769 0.73179 0.86411 0.66191 0.83507 0.76156 0.80352 0.78432 0.87849 0.76723 0.806999 0.77249 0.75770 0.760685 0.64220 0.61650 0.817049 0.747190 0.77669 0.544005 0.75786 0.80187 0.80931 0.84089 0.81808 0.96284 0.83773 0.758790 0.883636 0.88911 0.0243338 0.0379269 0.0210213 0.2044086 0.0334747 0.239690 0.569222 0.446644 0.422310 0.362390 0.459173 5 0.74332 0.77466 -0.04873356 8 0.63160 0.60156 0.03003620 0.9590676 0.0267668 weaklyHypometh 1 1.00000 insignificant 0.842082 0.2092350 insignificant 1 1 insignificant -0.02706013 0.5140482 insignificant 1 insignificant 0.74243 0.0684770 0.652827 8 0.57145 0.0800151 0.4914314 1.7071e-86 1.0000e+00 hypermethylated 5.6903e-84 1.0000e+00 hypermethylated 1.3719e-25 1.0000e+00 hypermethylated 6.8595e-23 1.00000000 hypermethylated 0.58200802 2.4500e-15 hypermethylated 1.2250e-12 hypermethylated 0.74735 0.396953 0.3326405 8 0.69669 0.311549 0.3851426 7.7187e-44 1.000000 hypermethylated 7.7187e-41 1 hypermethylated 1.2385e-21 1.000000 hypermethylated 1.2385e-18 1 hypermethylated 0.39519484 1.8481e-05 hypermethylated 3.0802e-03 hypermethylated 0.77533 0.0682898 0.69219500 13 0.64292 0.0904388 0.55248404 1.5135e-75 1.0000e+00 hypermethylated 1.5135e-72 1.0000e+00 hypermethylated 2.2105e-22 1.0000e+00 hypermethylated 1.1052e-19 1.0000000 hypermethylated 0.609068 1.1094e-10 hypermethylated 3.9742e-08 hypermethylated 0.77717 0.396953 3.9195e-01 10 0.67944 0.311549 0.36789043 8.2894e-44 0.999976 hypermethylated 8.2894e-41 1 hypermethylated 1.3256e-18 1.000000 hypermethylated 1.3256e-15 1 hypermethylated 0.4222550 1.8206e-06 hypermethylated 0.00060688 hypermethylated 0.0679785 0.396953 -0.3039249 10 0.0891640 0.31155 -0.2223851 1.0000e+00 2.0062e-16 hypomethylated 1.00000000 2.5024e-14 hypomethylated 9.9999e-01 1.0976e-07 hypomethylated 1.0000000 1.5009e-05 hypomethylated -1.8681e-01 2.9198e-03 weaklyHypometh 0.09732624 weaklyHypometh chr9 138122118 138123118 97979 NACC2 ENSG00000148411 0.67786 229 5 0.64033 169 7 0.42683 145 5 0.67432 251 5 0.40633 116 6 0.75429 254 5 0.60942 124 6 0.68783 149 6 0.71231 156 5 0.64969 159 5 0.75626 210 7 0.66136 88 5 0.443135 175 5 0.91587 42 4 0.54138 126 5 0.67203 66 4 0.62409 74 4 0.54547 241 5 0.55718 116 5 0.669019 255 5 0.75060 65 4 0.348810 106 4 0.70133 202 5 0.55848 69 4 0.51105 89 4 0.75789 210 5 0.65699 149 4 0.58443 66 4 0.66737 162 5 0.707781 229 6 0.643015 305 6 0.74807 263 6 0.4612626 122 5 0.2174725 143 6 0.7597430 146 5 0.340415 59 3 0.460272 141 6 0.567482 182 6 0.600502 196 5 0.628168 285 5 0.554593 202 5 0.604870 238 5 0.562525 240 5 0.80868 0.68908 0.72503 0.81372 0.63162 0.88402 0.68044 0.72313 0.69348 0.73406 0.80045 0.80213 0.467334 0.96058 0.64017 0.769120 0.64842 0.66475 0.659334 0.738477 0.67031 0.445890 0.75928 0.53420 0.48611 0.73755 0.60448 0.76944 0.78002 0.770299 0.651760 0.82540 0.4419704 0.2311096 0.6771280 0.4429064 0.6596335 0.505868 0.540749 0.527860 0.482233 0.610947 0.530211 3 0.73632 0.70846 0.02086168 5 0.51332 0.60394 -0.09061168 0.5876140 0.5335321 insignificant 1 1.00000 insignificant 0.684960 0.3312590 insignificant 1 1 insignificant -0.00506693 0.9092346 lowCoverage 1 lowCoverage 0.73664 0.5151899 0.193666 5 0.60423 0.5469882 0.0572457 2.4767e-04 9.7843e-01 weaklyHypermeth 2.6921e-03 1.0000e+00 weaklyHypermeth 1.1313e-02 9.0360e-01 weaklyHypermeth 1.3003e-01 1.00000000 insignificant 0.16347698 8.7325e-02 insignificant 8.3966e-01 insignificant 0.73644 0.597761 0.1553347 5 0.49466 0.517180 -0.0225231 1.9808e-05 0.717430 weaklyHypermeth 6.0026e-04 1 weaklyHypermeth 1.1453e-03 0.388343 weaklyHypermeth 2.8632e-02 1 weaklyHypermeth 0.04112003 1.8951e-01 insignificant 1.0000e+00 insignificant 0.70779 0.5132743 0.18246031 5 0.51303 0.4560791 0.05694825 5.8992e-03 9.9436e-01 weaklyHypermeth 5.6723e-02 1.0000e+00 weaklyHypermeth 4.1873e-02 9.8870e-01 weaklyHypermeth 4.1052e-01 1.0000000 insignificant 0.168544 8.3083e-02 lowCoverage 8.4778e-01 lowCoverage 0.70883 0.597761 1.3477e-01 5 0.66433 0.517180 0.14714970 1.1337e-03 0.889951 weaklyHypermeth 2.4121e-02 1 weaklyHypermeth 1.4577e-02 0.553533 weaklyHypermeth 2.6030e-01 1 insignificant 0.0461870 2.3579e-01 lowCoverage 1.00000000 lowCoverage 0.5152672 0.597414 -0.0457876 5 0.5203930 0.46353 0.0568592 7.6412e-01 3.5491e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.7994e-01 4.8603e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.2236e-01 1.7133e-01 insignificant 1.00000000 insignificant chr9 138188406 138189406 97980 NACC2 ENSG00000148411 0.78954 334 13 0.81989 379 13 0.78341 462 14 0.93316 384 13 0.84058 276 13 0.88967 451 14 0.83462 276 13 0.86564 477 13 0.81962 366 14 0.90712 474 14 0.92282 464 14 0.85006 145 10 0.861127 476 14 0.90098 185 10 0.87124 488 13 0.77865 154 9 0.43357 77 7 0.76831 436 13 0.91543 487 13 0.809991 494 14 0.83592 255 12 0.513379 277 13 0.85279 387 13 0.76760 243 13 0.79455 196 12 0.83714 444 14 0.84216 295 14 0.66371 135 12 0.76442 386 13 0.896885 435 13 0.884066 541 14 0.92149 640 14 0.2426496 426 13 0.2670562 464 13 0.3579156 419 13 0.385407 133 8 0.427451 280 14 0.288816 712 14 0.584067 325 12 0.624565 432 13 0.751110 291 12 0.653400 515 13 0.779299 378 13 0.85600 0.78615 0.76527 0.93303 0.85970 0.87508 0.87850 0.88203 0.84756 0.91901 0.91378 0.83965 0.852957 0.89607 0.90905 0.721278 0.44807 0.75115 0.900053 0.852240 0.89576 0.561423 0.89121 0.84338 0.84874 0.88043 0.83538 0.71626 0.73596 0.887292 0.881812 0.90618 0.2565954 0.1380805 0.4331905 0.3078483 0.4553059 0.369612 0.631057 0.771953 0.705415 0.646830 0.766844 12 0.86273 0.83609 0.02545889 14 0.80544 0.79482 0.01062691 0.0084964 0.8588025 weaklyHypermeth 1 1.00000 insignificant 0.335682 0.7846008 insignificant 1 1 insignificant 0.03192790 0.4379943 insignificant 1 insignificant 0.86295 0.3151191 0.543958 14 0.83692 0.2853017 0.5516142 4.6078e-104 1.0000e+00 hypermethylated 4.6078e-101 1.0000e+00 hypermethylated 5.8077e-30 1.0000e+00 hypermethylated 5.8077e-27 1.00000000 hypermethylated 0.50155452 1.5920e-08 hypermethylated 1.7689e-06 hypermethylated 0.86273 0.688305 0.1561784 13 0.80544 0.620365 0.1850766 4.9696e-20 1.000000 weaklyHypermeth 9.9392e-18 1 weaklyHypermeth 3.7141e-09 1.000000 weaklyHypermeth 7.4281e-07 1 weaklyHypermeth 0.15128212 9.7911e-03 weaklyHypermeth 3.5713e-01 insignificant 0.83605 0.3151191 0.51772706 14 0.78114 0.2853017 0.49583442 1.9690e-55 1.0000e+00 hypermethylated 6.5635e-53 1.0000e+00 hypermethylated 5.2197e-23 1.0000e+00 hypermethylated 5.2197e-20 1.0000000 hypermethylated 0.469627 2.8619e-08 hypermethylated 5.7238e-06 hypermethylated 0.83609 0.688305 1.4187e-01 13 0.79482 0.620365 0.17444970 3.1868e-08 0.999900 weaklyHypermeth 1.6773e-06 1 weaklyHypermeth 4.9390e-05 0.999950 weaklyHypermeth 2.5995e-03 1 weaklyHypermeth 0.1193542 3.6432e-02 weaklyHypermeth 0.75900652 insignificant 0.3151191 0.688854 -0.3819481 13 0.2853017 0.63950 -0.3541992 1.0000e+00 2.9718e-23 hypomethylated 1.00000000 9.9058e-21 hypomethylated 1.0000e+00 1.0112e-13 hypomethylated 1.0000000 1.0112e-10 hypomethylated -3.5027e-01 7.6774e-05 hypomethylated 0.01096771 hypomethylated chr9 138211412 138212412 97981 NACC2 ENSG00000148411 0.90875 236 6 0.83984 397 6 0.83850 183 6 0.87173 227 6 0.84799 152 6 0.86160 245 6 0.89792 201 6 0.92812 199 6 0.83967 230 6 0.97671 171 6 0.90316 356 6 0.90220 84 6 0.948669 165 6 0.92455 143 6 0.92119 190 6 0.98000 74 6 0.96364 35 2 0.85726 285 6 0.92087 335 6 0.851888 252 6 0.77058 114 6 0.944444 77 4 0.92490 142 6 0.93016 232 6 0.97222 54 5 0.90800 353 6 0.84083 147 6 0.96467 119 6 0.93660 292 6 0.898738 364 6 0.930900 428 6 0.87624 269 6 0.6480623 307 6 0.5374527 99 5 0.8095034 362 6 0.800000 16 1 0.628158 223 6 0.499603 280 6 0.857278 183 6 0.829738 206 6 0.915451 162 6 0.953938 185 6 0.923910 181 5 0.90174 0.84483 0.82430 0.86397 0.83100 0.85288 0.89423 0.92879 0.82303 0.97327 0.90218 0.90475 0.970325 0.92618 0.93130 0.980531 0.96475 0.84631 0.928651 0.839992 0.90179 0.953505 0.92366 0.92035 0.96706 0.88760 0.82729 0.95811 0.92939 0.899248 0.934136 0.86745 0.6514793 0.5063662 0.7793625 0.7825280 0.6075404 0.522434 0.861627 0.835118 0.904876 0.948092 0.916364 5 0.88293 0.91194 -0.03039462 6 0.88997 0.91383 -0.02386029 0.8329457 0.0060279 weaklyHypometh 1 0.82677 insignificant 0.887625 0.0465998 weaklyHypometh 1 1 insignificant -0.00897815 0.6482657 insignificant 1 insignificant 0.88293 0.6247086 0.252532 6 0.88997 0.6296379 0.2603281 1.7522e-24 1.0000e+00 hypermethylated 9.7345e-23 1.0000e+00 hypermethylated 1.5237e-07 1.0000e+00 hypermethylated 5.6434e-06 1.00000000 hypermethylated 0.24541611 5.0204e-03 weaklyHypermeth 1.0246e-01 insignificant 0.88293 0.892039 -0.0066296 6 0.88997 0.891944 -0.0019780 6.0176e-01 0.400476 insignificant 1.0000e+00 1 insignificant 5.4020e-01 0.646788 insignificant 1.0000e+00 1 insignificant 0.00314969 9.0428e-01 insignificant 1.0000e+00 insignificant 0.91194 0.6247086 0.28667464 6 0.91383 0.6296379 0.28418843 2.5231e-20 1.0000e+00 hypermethylated 1.3279e-18 1.0000e+00 hypermethylated 2.2167e-07 1.0000e+00 hypermethylated 9.6379e-06 1.0000000 hypermethylated 0.254394 3.7129e-03 weaklyHypermeth 8.0939e-02 weaklyHypermeth 0.91194 0.892039 2.0853e-02 6 0.91383 0.891944 0.02188227 1.1424e-01 0.906273 insignificant 1.0000e+00 1 insignificant 2.0635e-01 0.979725 insignificant 1.0000e+00 1 insignificant 0.0121278 6.7653e-01 insignificant 1.00000000 insignificant 0.6247086 0.892039 -0.2559594 6 0.6296379 0.89194 -0.2623062 1.0000e+00 4.5000e-09 hypomethylated 1.00000000 2.5000e-07 hypomethylated 9.9995e-01 2.5128e-04 hypomethylated 1.0000000 8.9745e-03 hypomethylated -2.4227e-01 4.3155e-03 weaklyHypometh 0.11944127 insignificant chr9 138211675 138212675 97982 NACC2 ENSG00000148411 0.89050 219 5 0.81495 369 5 0.84429 162 5 0.87154 172 5 0.85759 132 5 0.84302 223 5 0.89055 155 5 0.92486 181 5 0.82982 194 5 0.98806 146 5 0.89917 330 5 0.89643 55 5 0.938403 149 5 0.90946 137 5 0.92024 163 5 0.97600 57 5 0.95455 14 1 0.84251 256 5 0.92504 315 5 0.828326 219 5 0.73235 94 5 0.933333 74 4 0.92239 126 5 0.92571 211 5 0.96667 47 4 0.91227 319 5 0.85110 128 5 0.95761 94 5 0.92392 276 5 0.910486 339 5 0.923532 397 5 0.85149 241 5 0.6610081 295 5 0.6096491 82 4 0.8354041 337 5 0.750000 13 1 0.607123 193 5 0.482857 256 5 0.834139 146 5 0.799686 156 5 0.918541 142 5 0.953422 162 5 0.919803 163 4 0.87887 0.81703 0.82774 0.86193 0.83822 0.82922 0.88480 0.92514 0.80770 0.98567 0.89731 0.89864 0.963419 0.90900 0.93255 0.976000 0.95655 0.82659 0.935319 0.809806 0.87893 0.942684 0.92044 0.91289 0.95939 0.88882 0.83609 0.94836 0.91296 0.913037 0.926314 0.83660 0.6673387 0.5831419 0.8024869 0.7319163 0.5782650 0.508261 0.835714 0.801400 0.906011 0.946130 0.909829 4 0.87692 0.90913 -0.03241946 5 0.88280 0.90884 -0.02603349 0.7536383 0.0049582 weaklyHypometh 1 0.82677 insignificant 0.796020 0.0655479 insignificant 1 1 insignificant -0.00863958 0.6922608 lowCoverage 1 lowCoverage 0.87692 0.6275510 0.244073 5 0.88280 0.6366466 0.2461564 1.1180e-19 1.0000e+00 hypermethylated 4.1408e-18 1.0000e+00 hypermethylated 2.3240e-06 9.9998e-01 hypermethylated 6.4556e-05 1.00000000 hypermethylated 0.23459110 4.7525e-03 lowCoverage 1.0087e-01 lowCoverage 0.87692 0.879064 -0.0020408 5 0.88280 0.878441 0.0043620 4.4383e-01 0.641294 insignificant 1.0000e+00 1 insignificant 4.1706e-01 0.715109 insignificant 1.0000e+00 1 insignificant 0.00714661 8.2726e-01 lowCoverage 1.0000e+00 lowCoverage 0.90913 0.6275510 0.28105068 5 0.90884 0.6366466 0.27218993 2.0752e-17 1.0000e+00 hypermethylated 8.6466e-16 1.0000e+00 hypermethylated 3.2745e-06 9.9997e-01 hypermethylated 9.0959e-05 1.0000000 hypermethylated 0.243231 3.3370e-03 lowCoverage 7.5841e-02 lowCoverage 0.90913 0.879064 2.6744e-02 5 0.90884 0.878441 0.03039551 6.5918e-02 0.963118 insignificant 8.1093e-01 1 insignificant 2.1757e-01 0.962208 insignificant 1.0000e+00 1 insignificant 0.0157862 6.5899e-01 lowCoverage 1.00000000 lowCoverage 0.6275510 0.879064 -0.2416230 5 0.6366466 0.87844 -0.2417944 9.9998e-01 1.3276e-07 hypomethylated 1.00000000 6.0348e-06 hypomethylated 9.9963e-01 7.6510e-04 hypomethylated 1.0000000 2.2503e-02 hypomethylated -2.2744e-01 4.6094e-03 lowCoverage 0.11944127 lowCoverage chr9 139179626 139180626 97984 ENSG00000216006 0.78720 528 13 0.57288 226 10 0.72800 247 12 0.87970 432 11 0.62903 169 11 0.81307 590 13 0.52530 154 12 0.73739 282 13 0.77625 276 12 0.79166 305 10 0.78920 413 13 0.66042 109 10 0.688899 344 13 0.84567 176 6 0.73106 212 10 0.76395 72 6 0.53618 336 7 0.71265 829 10 0.71573 364 13 0.809576 467 13 0.77922 231 13 0.647766 215 7 0.66996 342 13 0.76686 174 11 0.73556 391 9 0.85473 289 11 0.64288 257 12 0.62564 100 7 0.83765 288 12 0.684599 278 13 0.745475 377 12 0.74245 528 13 0.5665051 344 14 0.5193587 455 13 0.5345332 327 10 0.459473 104 7 0.355874 248 13 0.409852 479 13 0.807418 334 11 0.806556 474 13 0.917769 396 11 0.780680 570 12 0.790933 372 11 0.83605 0.71510 0.85201 0.87781 0.79346 0.83542 0.66294 0.86080 0.83398 0.89139 0.86951 0.72090 0.807700 0.84699 0.88407 0.747366 0.64304 0.83566 0.874927 0.901338 0.90172 0.794623 0.85592 0.78590 0.91610 0.85992 0.84771 0.76024 0.87229 0.793552 0.813972 0.90124 0.6251131 0.6635068 0.5092502 0.5842378 0.6142388 0.508772 0.828704 0.881023 0.876834 0.795988 0.853060 7 0.81587 0.84651 -0.02821690 13 0.66336 0.51801 0.14534563 0.9769347 0.5594489 insignificant 1 1.00000 insignificant 0.997858 0.2613270 insignificant 1 1 insignificant -0.00304281 0.9222585 insignificant 1 insignificant 0.81591 0.5477772 0.270124 13 0.66291 0.3359437 0.3269641 6.1178e-34 1.0000e+00 hypermethylated 5.1810e-32 1.0000e+00 hypermethylated 1.9439e-12 1.0000e+00 hypermethylated 1.6200e-10 1.00000000 hypermethylated 0.25042477 8.9268e-05 hypermethylated 3.5707e-03 hypermethylated 0.81750 0.844755 -0.0253527 12 0.69906 0.734170 -0.0351129 9.1489e-01 0.072105 insignificant 1.0000e+00 1 insignificant 9.5300e-01 0.047150 weaklyHypometh 1.0000e+00 1 insignificant -0.09598023 1.4169e-02 weaklyHypometh 4.1718e-01 insignificant 0.84841 0.5480573 0.29751307 13 0.56453 0.3519410 0.21258722 3.4302e-25 1.0000e+00 hypermethylated 2.8585e-23 1.0000e+00 hypermethylated 6.5056e-11 1.0000e+00 hypermethylated 8.1319e-09 1.0000000 hypermethylated 0.253468 9.6868e-05 hypermethylated 3.8747e-03 hypermethylated 0.85062 0.844755 9.1766e-03 12 0.69736 0.734170 -0.03681162 7.3903e-01 0.233659 insignificant 1.0000e+00 1 insignificant 6.6959e-01 0.672705 insignificant 1.0000e+00 1 insignificant -0.0929374 1.7672e-02 weaklyHypometh 0.47483442 insignificant 0.5494618 0.844755 -0.3009304 12 0.4347507 0.73417 -0.2994194 1.0000e+00 2.2521e-16 hypomethylated 1.00000000 2.5024e-14 hypomethylated 1.0000e+00 3.2644e-10 hypomethylated 1.0000000 8.9438e-08 hypomethylated -3.4641e-01 1.7700e-05 hypomethylated 0.00353996 hypomethylated chr9 139185767 139186767 97985 TMEM210 ENSG00000185863 0.90870 420 6 0.71679 237 6 0.83105 137 8 0.95576 397 8 0.73101 67 6 0.76963 389 6 0.62739 62 4 0.75118 188 6 0.78625 128 6 0.89176 140 6 0.88289 357 8 0.62692 31 2 0.853598 173 6 0.79364 149 6 0.76265 113 6 0.58333 20 1 NA 0 0 0.82908 715 6 0.89059 448 6 0.856834 336 8 0.90856 119 8 0.833333 68 2 0.78620 140 6 0.90874 86 6 0.90853 192 8 0.85495 271 6 0.87291 178 7 0.74868 53 3 0.84415 289 6 0.768427 257 6 0.882663 403 6 0.86871 326 8 0.5566154 214 6 0.6842238 196 8 0.7024127 385 8 0.686111 68 2 0.430317 174 6 0.820254 344 8 0.870238 182 8 0.917570 413 8 0.821087 276 4 0.949116 281 4 0.904797 194 8 0.89117 0.73144 0.81865 0.91185 0.78813 0.88298 0.60873 0.85445 0.82575 0.85018 0.88159 0.67685 0.879570 0.89509 0.82887 0.687075 NA 0.86809 0.872048 0.858668 0.83136 0.967914 0.88431 0.88105 0.94412 0.88949 0.83842 0.67444 0.83711 0.884070 0.878222 0.89746 0.6472399 0.7861200 0.5927992 0.8288770 0.7701856 0.925099 0.806341 0.902508 0.929073 0.915350 0.922988 2 0.87347 0.87783 -0.01594305 6 0.76241 0.78349 -0.02108237 0.9266805 0.3455786 insignificant 1 1.00000 insignificant 0.948346 0.1273174 insignificant 1 1 insignificant -0.05676598 0.0555423 insignificant 1 insignificant 0.87309 0.7596224 0.079327 6 0.68617 0.6928150 -0.0066438 1.9765e-05 9.8902e-01 weaklyHypermeth 2.3813e-04 1.0000e+00 weaklyHypermeth 1.0138e-02 7.3349e-01 weaklyHypermeth 1.1788e-01 1.00000000 insignificant 0.14539932 4.6039e-02 weaklyHypermeth 5.0847e-01 insignificant 0.87309 0.915242 -0.0422263 6 0.68617 0.822147 -0.1359759 9.9986e-01 0.087678 insignificant 1.0000e+00 1 insignificant 9.9998e-01 0.019343 weaklyHypometh 1.0000e+00 1 insignificant -0.10050653 7.2481e-03 weaklyHypometh 2.8993e-01 insignificant 0.87783 0.7594477 0.10795664 6 0.78349 0.6586833 0.12481144 1.0071e-04 9.4011e-01 weaklyHypermeth 1.2912e-03 1.0000e+00 weaklyHypermeth 2.2410e-03 9.8358e-01 weaklyHypermeth 3.3447e-02 1.0000000 weaklyHypermeth 0.202165 1.2982e-02 weaklyHypermeth 2.1282e-01 insignificant 0.87783 0.915179 -2.1055e-02 6 0.78349 0.802386 -0.01889082 9.8220e-01 0.159909 insignificant 1.0000e+00 1 insignificant 9.7078e-01 0.273234 insignificant 1.0000e+00 1 insignificant -0.0437405 1.4268e-01 insignificant 1.00000000 insignificant 0.7590711 0.915305 -0.1121423 8 0.6298318 0.83832 -0.2084837 9.9999e-01 2.0636e-02 weaklyHypometh 1.00000000 2.6457e-01 insignificant 1.0000e+00 1.4035e-02 weaklyHypometh 1.0000000 2.4623e-01 insignificant -2.4591e-01 5.0695e-03 weaklyHypometh 0.12364630 insignificant chr9 139334612 139335612 97986 NRARP ENSG00000198435 0.44298 250 5 0.36265 192 5 0.27063 170 4 0.31197 296 5 0.38845 137 4 0.65741 287 4 0.23016 143 4 0.31419 231 5 0.33641 208 5 0.14773 227 4 0.42578 202 5 0.32353 99 4 0.129404 259 4 0.37345 159 4 0.31589 243 4 0.15292 140 4 0.18803 31 3 0.16910 307 4 0.23862 197 5 0.421181 224 5 0.39554 83 4 0.225783 120 4 0.50760 134 4 0.53996 153 4 0.32074 373 5 0.22412 290 5 0.53915 116 4 0.38039 88 3 0.31172 172 3 0.191966 256 5 0.272914 270 5 0.31002 237 4 0.3202368 163 5 0.5657171 148 4 0.2648810 134 3 0.034439 140 3 0.417302 164 6 0.254120 178 5 0.098157 262 5 0.172292 211 5 0.166183 234 5 0.155393 260 4 0.224906 173 5 0.31972 0.23725 0.25919 0.22735 0.13758 0.56596 0.12756 0.22907 0.24765 0.16932 0.31892 0.30442 0.025782 0.25563 0.20007 0.094783 0.16567 0.15761 0.036434 0.179703 0.33728 0.146860 0.35546 0.33100 0.19017 0.22233 0.23714 0.35983 0.21138 0.137064 0.189161 0.27757 0.2765894 0.1555850 0.2305665 0.0381920 0.4481789 0.093954 0.078320 0.144280 0.122974 0.097377 0.226422 3 0.23113 0.25524 -0.00979098 4 0.37399 0.35195 0.02204511 0.8958186 0.6418395 lowCoverage 1 1.00000 lowCoverage 0.993018 0.6215318 lowCoverage 1 1 lowCoverage -0.04163325 0.3692548 lowCoverage 1 lowCoverage 0.23092 0.2891046 -0.036543 4 0.36623 0.2897113 0.0765217 5.6570e-01 3.9452e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0457e-01 5.0241e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.00057599 9.9433e-01 lowCoverage 1.0000e+00 lowCoverage 0.23061 0.142105 0.0851589 4 0.36815 0.116686 0.2514682 1.0277e-02 0.999236 lowCoverage 1.5572e-01 1 lowCoverage 1.5562e-02 0.999862 lowCoverage 2.7788e-01 1 lowCoverage 0.14663905 4.7117e-04 lowCoverage 3.6243e-02 lowCoverage 0.25546 0.2891046 -0.02692204 5 0.41594 0.2897113 0.12622599 2.1349e-01 1.2847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5383e-01 8.6490e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.042209 6.1645e-01 lowCoverage 1.0000e+00 lowCoverage 0.25504 0.142105 9.7957e-02 5 0.41566 0.116686 0.29897819 6.5284e-03 0.999122 weaklyHypermeth 1.1453e-01 1 insignificant 7.0259e-04 0.999875 weaklyHypermeth 2.1291e-02 1 weaklyHypermeth 0.1882723 3.3973e-04 lowCoverage 0.03905387 lowCoverage 0.2894737 0.142105 0.1270906 5 0.3239482 0.11669 0.2072627 6.8710e-02 9.9998e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.6200e-01 9.9781e-01 insignificant 1.0000000 1.0000e+00 insignificant 1.4606e-01 1.0268e-01 lowCoverage 1.00000000 lowCoverage chr10 587801 588801 97993 DIP2C ENSG00000151240 0.60739 82 5 0.71633 102 5 0.77556 34 4 0.75821 92 5 0.72786 32 4 0.84583 69 5 0.62024 27 4 0.71469 90 5 0.53333 19 3 0.75000 20 1 0.85860 118 5 0.12500 10 0 0.834286 42 5 0.65043 44 4 0.77500 32 2 0.66667 4 0 NA 0 0 0.81758 58 4 0.88476 47 3 0.813997 58 5 0.76476 26 4 1.000000 6 0 0.90364 34 3 0.65030 32 4 0.88889 41 4 0.79513 84 5 0.86667 33 4 0.78000 11 1 0.80000 31 1 0.844786 72 5 0.803446 66 5 0.74127 49 4 0.7477778 69 5 0.5220779 37 4 0.6290690 88 4 1.000000 3 0 0.603283 56 4 0.645279 88 5 0.828571 73 4 0.913942 74 5 0.736111 63 4 0.666667 4 0 0.885417 66 4 0.46994 0.67749 0.74444 0.74429 0.69156 0.85871 0.87143 0.81424 0.51200 0.84091 0.75350 0.22727 0.880519 0.63733 0.84659 0.939271 NA 0.83581 0.915368 0.697396 0.66017 0.978787 0.97810 0.44325 0.78255 0.80003 0.87500 0.74545 0.68182 0.904312 0.712970 0.57756 0.6767677 0.5566706 0.6207370 0.9802525 0.8675620 0.617946 0.902597 0.748427 0.744949 0.939394 0.827652 0 0.74590 0.79132 -0.05247660 5 0.74912 0.80218 -0.05306132 0.9907458 0.0161836 weaklyHypometh 1 0.91037 insignificant 0.982693 0.0087887 weaklyHypometh 1 1 insignificant -0.11065753 0.0249380 lowCoverage 1 lowCoverage 0.74514 0.6451613 0.085439 5 0.62427 0.5530864 0.0711820 4.1072e-02 9.9934e-01 weaklyHypermeth 3.4514e-01 1.0000e+00 insignificant 2.8720e-01 9.8050e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01800220 8.2474e-01 lowCoverage 1.0000e+00 lowCoverage 0.74668 0.867857 -0.0681365 4 0.84320 0.831144 0.0120573 9.9607e-01 0.081059 lowCoverage 1.0000e+00 1 lowCoverage 9.9825e-01 0.340972 lowCoverage 1.0000e+00 1 lowCoverage -0.09689175 1.3865e-01 lowCoverage 1.0000e+00 lowCoverage 0.79132 0.6470588 0.13757608 5 0.80218 0.6637036 0.13847968 7.8432e-05 9.9959e-01 weaklyHypermeth 1.0186e-03 1.0000e+00 weaklyHypermeth 6.0362e-03 9.5954e-01 weaklyHypermeth 7.4520e-02 1.0000000 weaklyHypermeth 0.128660 1.2587e-01 lowCoverage 1.0000e+00 lowCoverage 0.79132 0.868613 -2.3784e-02 4 0.80218 0.829830 -0.02764699 8.5908e-01 0.235142 lowCoverage 1.0000e+00 1 lowCoverage 7.2564e-01 0.307175 lowCoverage 1.0000e+00 1 lowCoverage 0.0137658 8.0276e-01 lowCoverage 1.00000000 lowCoverage 0.6470588 0.868613 -0.1553263 4 0.6637036 0.82983 -0.1661267 9.9933e-01 4.1172e-06 lowCoverage 1.00000000 1.2983e-04 lowCoverage 9.9722e-01 3.9845e-02 lowCoverage 1.0000000 5.6922e-01 lowCoverage -1.1489e-01 2.0025e-01 lowCoverage 1.00000000 lowCoverage chr10 1432236 1433236 98008 ADARB2 ENSG00000185736 0.8195748 251 7 0.794684 591 7 0.8921900 201 7 0.9060871 185 5 0.896420 132 5 0.8656645 423 7 0.8394725 178 7 0.909877 236 7 0.863922 190 5 0.8551587 128 5 0.8894740 269 9 0.8768357 54 5 0.880896 142 5 0.9653782 108 3 0.854560 182 5 0.7333333 21 3 0.7666667 10 0 0.669449 209 7 0.9282146 384 7 0.9184049 265 7 0.958281 136 7 0.880969 88 3 0.902520 206 7 0.880143 142 7 0.753711 124 5 0.9695741 394 7 0.872450 149 7 0.8033217 109 3 0.973650 325 5 0.9368372 495 7 0.8565082 436 5 0.967078 323 7 0.0529912 334 7 0.0792717 138 7 0.202778 272 5 0.00000 65 4 0.040124 345 7 0.0322862 356 7 0.6851986 209 7 0.72991345 201 7 0.78983995 188 5 0.779856 176 7 0.701438 174 7 0.8864360 0.9056081 0.8805304 0.910326 0.884813 0.8669159 0.8682022 0.884174 0.8898340 0.8828237 0.9161524 0.7957957 0.9204891 0.926768 0.888985 0.856978 0.911627 0.686373 0.9234639 0.8714524 0.973995 0.698578 0.926530 0.814311 0.955145 0.9541548 0.846856 0.906056 0.948235 0.94742395 0.9170372 0.9446406 0.0641367 0.078408 0.05941384 0.00000 0.060297 0.0428553 0.7020932 0.7401038 0.8146090 0.7950414 0.811714 3 0.8783361 0.922788 -0.04380814 7 0.799321 0.911879 -0.1125584 0.9997323 0.0024519 weaklyHypometh 1 1 insignificant 0.99975526 0.005731 weaklyHypometh 1.00000 1 insignificant -0.0399406 0.132019 insignificant 1 insignificant 0.8784957 0.0549669 0.82488976 7 0.862955 0.051707 0.8112480 3.0448e-88 1.0000e+00 hypermethylated 3.0448e-85 1.0000e+00 hypermethylated 1.6260e-18 1.0000e+00 hypermethylated 1.626e-15 1.0000e+00 hypermethylated 0.7884047 6.8518e-09 hypermethylated 2.8709e-06 hypermethylated 0.8785182 0.7708553 0.1124067 7 0.865837 0.694293 0.17154342 1.8089e-09 9.9724e-01 weaklyHypermeth 3.0148e-07 1.0000000 weaklyHypermeth 6.5635e-05 0.99995899 weaklyHypermeth 1.0939e-02 1.00000 weaklyHypermeth 0.1190639 0.0012460 weaklyHypermeth 0.13844 insignificant 0.922840 0.0549669 0.8701792 7 0.899668 0.051707 0.8479602 2.3598e-76 1.0000e+00 hypermethylated 2.3598e-73 1.0000e+00 hypermethylated 1.6698e-15 1.0000e+00 hypermethylated 1.6698e-12 1.0000e+00 hypermethylated 0.8283453 4.9051e-10 hypermethylated 4.9051e-07 hypermethylated 0.922656 0.7708553 0.1540444 7 0.892297 0.694293 0.1980037 2.1911e-12 1.0000e+00 weaklyHypermeth 2.1911e-09 1.0000e+00 weaklyHypermeth 4.4956e-07 1.0000e+00 weaklyHypermeth 0.00014985 1.000000 weaklyHypermeth 0.1590045 0.00016500 weaklyHypermeth 0.054999 weaklyHypermeth 0.054967 0.7714286 -0.71955977 7 0.051707 0.718580 -0.6668727 1.0000e+00 1.3534e-37 hypomethylated 1.0000e+00 1.3534e-34 hypomethylated 1.0000e+00 1.5468e-09 hypomethylated 1.0000e+00 1.5468e-06 hypomethylated -0.6693408 2.7420e-08 hypomethylated 0.00002742 hypomethylated chr10 1795852 1796852 98032 ADARB2 ENSG00000185736 0.7355832 277 7 0.717352 91 6 0.7070235 158 7 0.7687021 150 7 0.704553 64 6 0.7479807 243 7 0.7711758 131 7 0.651702 104 5 0.673916 88 7 0.7731849 109 7 0.7913095 191 7 0.8005978 79 7 0.750966 155 7 NA 0 0 0.702123 145 7 0.7299916 103 7 0.7116257 68 7 0.793309 153 7 0.7021714 121 7 0.8505945 267 7 0.880952 56 6 0.755341 97 7 0.745561 181 7 0.859529 51 5 0.782143 43 6 0.6670149 106 7 0.821518 77 7 0.6876623 60 7 0.739094 68 4 0.7522022 123 7 0.6996966 137 7 0.745023 320 7 0.7044199 77 6 0.5660631 81 7 0.634211 92 7 0.78920 72 7 0.730062 68 4 0.7665009 93 7 0.7853946 394 7 0.78448455 275 7 0.75856910 205 7 0.744134 316 7 0.797107 268 7 0.7222011 0.7062306 0.6872562 0.763777 0.700400 0.7343543 0.7694476 0.672920 0.6306663 0.7422807 0.7630995 0.7888451 0.7436488 NA 0.671132 0.734977 0.733740 0.764571 0.6659406 0.8208182 0.831037 0.714549 0.739351 0.807758 0.775787 0.6624739 0.788744 0.638953 0.741319 0.73187715 0.6773644 0.7080545 0.6709639 0.565057 0.58267717 0.74131 0.687345 0.7609532 0.7575880 0.7427010 0.7461912 0.7100987 0.786643 4 0.7500927 0.725550 0.01089792 7 0.752457 0.748048 0.0044084 0.3200356 0.3295312 insignificant 1 1 insignificant 0.89357957 0.010918 inconclusive 1.00000 1 insignificant -0.0200556 0.373777 insignificant 1 insignificant 0.7500927 0.6790890 0.06472947 7 0.752457 0.701013 0.0514431 6.7765e-04 5.4380e-01 weaklyHypermeth 1.9931e-02 1.0000e+00 weaklyHypermeth 4.1180e-02 5.5671e-01 weaklyHypermeth 1.000e+00 1.0000e+00 insignificant 0.0428464 2.8079e-01 insignificant 1.0000e+00 insignificant 0.7500927 0.7935528 -0.0206608 7 0.752457 0.775253 -0.02279660 9.4928e-01 1.4936e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8913e-01 0.06728933 insignificant 1.0000e+00 1.00000 insignificant -0.0326820 0.0436628 weaklyHypometh 1.00000 insignificant 0.725550 0.6790890 0.0542110 7 0.748048 0.701013 0.0470347 7.9510e-03 7.7153e-01 weaklyHypermeth 2.0387e-01 1.0000e+00 insignificant 1.4557e-02 9.7299e-01 weaklyHypermeth 4.2815e-01 1.0000e+00 insignificant 0.0629020 1.4734e-01 insignificant 1.0000e+00 insignificant 0.725550 0.7935528 -0.0262184 7 0.748048 0.775253 -0.0272050 7.6591e-01 1.0952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6595e-01 4.6288e-01 insignificant 1.00000000 1.000000 insignificant -0.0126264 0.56208863 insignificant 1.000000 insignificant 0.679089 0.7935528 -0.08189431 7 0.701013 0.775253 -0.0742397 8.8942e-01 5.9295e-03 weaklyHypometh 1.0000e+00 2.0447e-01 insignificant 9.2689e-01 2.8434e-02 weaklyHypometh 1.0000e+00 9.8048e-01 insignificant -0.0755283 8.0970e-02 insignificant 1.00000000 insignificant chr10 4197665 4198665 98133 KLF6 ENSG00000067082 0.8939119 160 7 0.823683 157 8 0.7817311 136 6 0.8779304 105 6 0.611111 41 3 0.8274226 122 6 0.7000000 36 3 0.800000 41 5 0.709524 21 2 0.7142857 13 1 0.7438095 72 5 0.3055556 16 1 0.802667 33 1 0.6809524 27 1 0.835897 29 3 0.5000000 12 1 1.0000000 10 1 0.786948 95 7 0.6923077 38 4 0.7619048 104 6 0.250000 3 0 1.000000 3 0 0.806872 109 6 0.700000 18 1 0.766667 10 1 0.8535882 180 8 0.860000 13 1 0.5833333 6 0 0.869412 43 3 0.8237486 162 7 0.7963954 158 8 0.757691 134 7 0.7868543 168 8 0.8083333 43 5 0.809155 129 8 1.00000 2 0 0.686667 32 4 0.8236722 131 7 0.7467220 103 5 0.74597680 139 7 0.80627464 130 7 0.695578 69 3 0.818786 125 7 0.8464052 0.6462145 0.7338936 0.978992 0.774510 0.7992889 0.6764706 0.673203 0.8333333 0.6008403 0.6599440 0.5014098 0.8117647 0.708683 0.909502 0.697488 0.951311 0.686275 0.3891403 0.6638655 0.401978 0.766867 0.876190 0.803922 0.608044 0.5763717 0.694118 0.736694 0.792388 0.78044502 0.7391403 0.6197267 0.6723426 0.599673 0.59893048 0.71859 0.645098 0.7773756 0.8201357 0.7804424 0.6966726 0.6078431 0.848093 0 0.7677725 0.798570 -0.01319151 7 0.799447 0.836740 -0.0372936 0.4801788 0.6271850 insignificant 1 1 insignificant 0.60278803 0.901265 insignificant 1.00000 1 insignificant -0.0131602 0.838534 lowCoverage 1 lowCoverage 0.7677725 0.8316832 -0.01949929 7 0.799447 0.825185 -0.0257388 1.9792e-01 1.8867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0807e-01 3.0351e-01 insignificant 1.000e+00 1.0000e+00 insignificant -0.0766315 1.7414e-01 lowCoverage 1.0000e+00 lowCoverage 0.7674051 0.7544170 0.0117006 7 0.744502 0.743629 0.00087297 6.7564e-01 6.3037e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.3264e-01 0.73655001 insignificant 1.0000e+00 1.00000 insignificant -0.0201855 0.6197015 lowCoverage 1.00000 lowCoverage 0.798570 0.8316832 -0.0206918 8 0.836740 0.825185 0.0115549 2.1087e-01 3.4693e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9439e-01 5.5843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0634713 3.6736e-01 lowCoverage 1.0000e+00 lowCoverage 0.798329 0.7553191 0.0387467 7 0.816333 0.804536 0.0117965 3.9276e-01 1.8738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7483e-01 2.1610e-01 insignificant 1.00000000 1.000000 insignificant -0.0070253 0.90668408 lowCoverage 1.000000 lowCoverage 0.831349 0.7553191 0.07869306 7 0.803334 0.804536 -0.0012027 4.1945e-02 4.6273e-02 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 5.2274e-01 2.0813e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0564460 2.6737e-01 insignificant 1.00000000 insignificant chr10 8140690 8141690 98229 GATA3 ENSG00000107485 0.0548192 209 9 0.034650 399 9 0.2200006 396 10 0.0291876 254 8 0.033512 384 10 0.1002049 511 10 0.0139876 535 10 0.064348 334 10 0.021915 502 10 0.0342752 558 10 0.0311150 459 10 0.1407359 395 9 0.033538 458 10 0.2265144 246 6 0.058543 554 9 0.0264060 622 9 0.0284334 176 5 0.231669 340 7 0.0240357 592 9 0.0316188 516 10 0.067155 162 7 0.016587 110 6 0.053566 288 9 0.061542 186 10 0.073182 72 6 0.0529270 474 10 0.027735 408 8 0.0266334 275 8 0.043029 441 9 0.0132619 521 10 0.0253296 571 10 0.015055 475 10 0.4410677 286 10 0.6165873 386 9 0.730766 504 8 0.38882 42 2 0.666676 172 9 0.2179946 514 10 0.0416445 425 7 0.12125600 303 8 0.20320285 185 6 0.316587 269 7 0.100002 211 6 0.0457276 0.0455329 0.1587261 0.043558 0.039020 0.1309914 0.0189548 0.070364 0.0242821 0.0408143 0.0362252 0.1647401 0.0330897 0.089001 0.072714 0.028438 0.053518 0.208604 0.0316921 0.0290296 0.099635 0.022855 0.069804 0.061048 0.073493 0.0539513 0.042491 0.045347 0.038161 0.01795968 0.0376290 0.0142349 0.3669221 0.535537 0.68333543 0.30536 0.561259 0.2984392 0.0577768 0.1795562 0.1253957 0.2960865 0.110829 6 0.0650474 0.039920 0.02401724 10 0.062128 0.034312 0.0278170 0.0017641 0.9999407 weaklyHypermeth 1 1 insignificant 0.00012303 0.999883 weaklyHypermeth 0.12303 1 insignificant 0.0323085 0.075621 insignificant 1 insignificant 0.0650474 0.5089286 -0.44337955 10 0.062128 0.495433 -0.4333041 1.0000e+00 1.1341e-50 hypomethylated 1.0000e+00 1.1341e-47 hypomethylated 1.0000e+00 2.8958e-21 hypomethylated 1.000e+00 2.8958e-18 hypomethylated -0.4383439 2.2764e-03 weaklyHypometh 1.5176e-01 insignificant 0.0650474 0.1550610 -0.0897985 7 0.062128 0.120603 -0.05847406 9.5985e-01 1.6331e-06 weaklyHypometh 1.0000e+00 0.0016331 weaklyHypometh 8.2437e-01 0.00033951 weaklyHypometh 1.0000e+00 0.28794 insignificant -0.0845629 0.1542932 insignificant 1.00000 insignificant 0.039920 0.5089286 -0.4620311 10 0.034312 0.495433 -0.4611211 1.0000e+00 1.8186e-38 hypomethylated 1.0000e+00 1.8186e-35 hypomethylated 1.0000e+00 2.6169e-19 hypomethylated 1.0000e+00 2.6169e-16 hypomethylated -0.4706524 1.9004e-03 weaklyHypometh 1.1878e-01 insignificant 0.039920 0.1550610 -0.1132632 7 0.034312 0.120603 -0.0862910 9.9810e-01 7.4789e-08 weaklyHypometh 1.0000e+00 7.4789e-05 weaklyHypometh 9.9824e-01 4.0952e-05 weaklyHypometh 1.00000000 0.040952 weaklyHypometh -0.1168715 0.06976974 insignificant 1.000000 insignificant 0.508929 0.1550610 0.34482709 7 0.495433 0.120603 0.3748301 2.7877e-10 1.0000e+00 hypermethylated 9.2923e-08 1.0000e+00 hypermethylated 2.3165e-07 1.0000e+00 hypermethylated 7.7216e-05 1.0000e+00 hypermethylated 0.3537809 5.1498e-03 weaklyHypermeth 0.28609808 insignificant chr10 8141667 8142667 98230 GATA3 ENSG00000107485 0.0404690 282 5 0.035539 239 5 0.0949594 169 5 0.0497151 359 5 0.089669 141 5 0.2359337 403 5 0.0447725 219 5 0.117397 188 5 0.025429 246 5 0.0386824 203 5 0.0479247 223 5 0.0856187 140 5 0.065385 156 4 0.1090196 144 4 0.067875 186 4 0.1291667 131 4 0.0666667 47 3 0.025533 305 5 0.1652016 73 3 0.0604021 248 5 0.075000 49 5 0.069568 126 4 0.111156 144 5 0.080556 87 4 0.042387 244 5 0.2291012 260 5 0.049118 129 4 0.0610294 59 4 0.129020 115 4 0.0343069 347 5 0.0380228 300 5 0.096784 273 5 0.0631871 220 5 0.0086957 128 5 0.000000 219 4 0.27236 93 3 0.260224 144 5 0.0353623 233 5 0.0360474 343 5 0.03716458 381 5 0.02285132 336 5 0.109492 145 4 0.029262 326 5 0.0470785 0.0462376 0.0979146 0.044255 0.069297 0.1653708 0.0413119 0.093951 0.0484753 0.0594642 0.0544894 0.0774464 0.0290075 0.068411 0.075858 0.105041 0.060341 0.037614 0.1378609 0.0334955 0.035839 0.074681 0.096471 0.114413 0.060263 0.0590830 0.072161 0.084225 0.104950 0.04373630 0.0431738 0.0884628 0.0506093 0.010946 0.00066621 0.42092 0.119154 0.0343265 0.0386176 0.0285269 0.0201733 0.0957633 0.035502 4 0.0753475 0.064728 0.00868120 5 0.077946 0.064974 0.0129725 0.2799793 0.5786808 insignificant 1 1 insignificant 0.42348895 0.182327 insignificant 1.00000 1 insignificant -0.0049028 0.804074 lowCoverage 1 lowCoverage 0.0753475 0.0444015 0.03062292 5 0.077946 0.047930 0.0300167 2.2695e-02 5.8919e-01 weaklyHypermeth 4.9337e-01 1.0000e+00 insignificant 5.1529e-02 8.0547e-01 insignificant 1.000e+00 1.0000e+00 insignificant -0.0268699 6.2937e-01 lowCoverage 1.0000e+00 lowCoverage 0.0753475 0.0431091 0.0320892 5 0.077946 0.037147 0.04079983 4.4609e-02 9.9718e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 9.2746e-02 0.98946259 insignificant 1.0000e+00 1.00000 insignificant 0.0328045 0.1300670 lowCoverage 1.00000 lowCoverage 0.064728 0.0444015 0.0198835 5 0.064974 0.047930 0.0170442 9.1794e-02 8.7895e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9988e-01 9.6695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0219671 6.9651e-01 lowCoverage 1.0000e+00 lowCoverage 0.064728 0.0431091 0.0250120 5 0.064974 0.037147 0.0278274 2.5265e-02 9.9264e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 6.6468e-03 9.1741e-01 weaklyHypermeth 0.66468476 1.000000 insignificant 0.0377073 0.11707847 lowCoverage 1.000000 lowCoverage 0.044402 0.0431091 0.00618557 5 0.047930 0.037147 0.0107832 2.9421e-01 6.2024e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7483e-01 3.2025e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0596744 3.0947e-01 lowCoverage 1.00000000 lowCoverage chr10 11100462 11101462 98550 CUGBP2 ENSG00000048740 0.0048102 678 24 0.011224 620 28 0.0201093 752 28 0.0642959 401 11 0.000000 299 21 0.0408048 429 24 0.0026455 504 21 0.000000 418 21 0.012346 492 21 0.0026455 433 21 0.0129452 561 21 0.0051650 537 21 0.011462 561 21 NA 0 0 0.014205 640 21 0.0062726 545 21 0.0135209 423 19 0.020022 384 14 0.0056022 359 21 0.0347064 537 16 0.024603 167 17 0.047619 308 10 0.020276 497 28 0.018093 249 19 0.142857 209 10 0.0031762 898 28 0.048576 244 21 0.0069444 141 12 0.021678 311 21 0.0023940 763 28 0.0041209 836 28 0.016617 674 26 0.0104210 500 28 0.0069330 397 21 0.044768 662 23 0.00000 196 10 0.036565 161 15 0.0342078 491 27 0.0089506 763 18 0.00085034 574 18 0.00096866 669 10 0.010033 604 12 0.022121 571 16 0.0071512 0.0059076 0.0134604 0.029456 0.000000 0.0264070 0.0043860 0.000000 0.0045252 0.0010443 0.0137326 0.0057410 0.0066338 NA 0.017478 0.010413 0.005494 0.015778 0.0022114 0.0232282 0.022306 0.014098 0.038348 0.017469 0.041583 0.0012630 0.023139 0.002193 0.012317 0.00059076 0.0021689 0.0111477 0.0042720 0.012409 0.02227815 0.00000 0.033298 0.0221188 0.0054682 0.0017902 0.0048385 0.0050969 0.015191 10 0.0196386 0.011516 0.00260915 21 0.015824 0.012654 0.0031706 0.7100267 0.9630575 insignificant 1 1 insignificant 0.92363299 0.954621 insignificant 1.00000 1 insignificant -0.0148630 0.229516 insignificant 1 insignificant 0.0196386 0.0166182 -0.00059896 21 0.015824 0.018881 -0.0030563 8.3490e-01 4.9317e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5633e-01 8.8208e-01 insignificant 1.000e+00 1.0000e+00 insignificant -0.0072657 4.1574e-01 insignificant 1.0000e+00 insignificant 0.0196386 0.0047155 0.0053816 12 0.015824 0.010073 0.00575149 6.7205e-01 9.9984e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3523e-01 0.99997355 insignificant 1.0000e+00 1.00000 insignificant 0.0062985 0.2635480 insignificant 1.00000 insignificant 0.011516 0.0166182 -0.0046251 27 0.012654 0.018881 -0.0062268 9.9970e-01 9.0975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9911e-01 9.9288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0075973 5.8232e-01 insignificant 1.0000e+00 insignificant 0.011516 0.0047155 0.0039775 12 0.012654 0.010073 0.0025809 9.7645e-01 9.9787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8071e-01 9.9996e-01 insignificant 1.00000000 1.000000 insignificant 0.0211614 0.09741261 insignificant 1.000000 insignificant 0.016618 0.0047155 0.00613306 12 0.018881 0.010073 0.0088077 8.1880e-01 9.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8984e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0135642 1.5352e-01 insignificant 1.00000000 insignificant chr10 16857354 16858354 98756 C1QL3 ENSG00000165985 0.9839640 134 5 0.881944 98 5 0.9196970 62 5 0.8721212 76 5 0.890236 72 5 0.8478818 267 5 0.9276688 96 5 0.920741 66 5 0.870000 36 1 0.9133333 22 1 0.9485801 258 5 0.9333333 46 5 0.957971 47 5 0.9714286 19 1 0.950000 60 5 0.9375000 32 1 NA 0 0 0.983333 96 4 0.9368421 90 1 0.9575000 179 5 1.000000 51 5 1.000000 1 0 0.941111 93 5 0.920000 31 3 0.400000 5 1 0.9665227 125 5 0.860627 69 5 0.4545455 11 1 0.966193 108 5 0.9292160 165 5 0.9755556 99 5 0.969763 201 5 0.9628571 73 5 0.9154545 64 5 0.461538 65 1 NA 0 0 0.928571 109 5 1.0000000 149 5 0.9677353 215 5 0.95936170 174 5 0.87522523 122 5 0.982906 121 1 0.954726 112 5 0.9864865 0.7222222 0.8484848 0.927273 0.814815 0.8957055 0.9259259 0.925926 0.8500000 0.9000000 0.9589041 0.6666667 0.9565217 0.857143 0.916667 0.687500 NA 0.916667 0.9342105 0.9375000 1.000000 1.000000 0.955556 1.000000 0.400000 0.9302326 0.731707 0.454545 0.921875 0.91304348 1.0000000 0.9339623 0.9142857 0.977273 0.46153846 NA 0.969697 1.0000000 0.9600000 0.9468085 0.9594595 0.9145299 0.940299 1 0.9197039 0.933264 -0.01217241 5 0.927579 0.946298 -0.0187185 0.9410678 0.1102422 insignificant 1 1 insignificant 0.72771365 0.338922 insignificant 1.00000 1 insignificant 0.0612357 0.334866 lowCoverage 1 lowCoverage 0.9197039 0.8934783 0.02593549 5 0.927579 0.933374 -0.0057942 7.0026e-01 2.5841e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3394e-01 2.7500e-01 insignificant 1.000e+00 1.0000e+00 insignificant 0.0728462 5.0420e-01 lowCoverage 1.0000e+00 lowCoverage 0.9197039 0.9435484 -0.0236719 5 0.927579 0.943095 -0.01551524 8.0873e-01 1.3534e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.3971e-01 0.07580248 insignificant 1.0000e+00 1.00000 insignificant -0.0214606 0.3433232 lowCoverage 1.00000 lowCoverage 0.933264 0.8934783 0.0347207 5 0.946298 0.933374 0.0129243 4.8450e-01 6.0987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8080e-01 3.8212e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116104 9.2300e-01 lowCoverage 1.0000e+00 lowCoverage 0.933264 0.9435484 -0.0098098 5 0.946298 0.943095 0.0032032 3.5639e-01 4.0231e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9575e-01 3.3955e-01 insignificant 1.00000000 1.000000 insignificant -0.0826964 0.21242121 lowCoverage 1.000000 lowCoverage 0.893478 0.9435484 -0.04938756 5 0.933374 0.943095 -0.0097210 5.2327e-01 3.7680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6581e-01 6.5026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0943068 3.9954e-01 lowCoverage 1.00000000 lowCoverage chr10 21856494 21857494 98893 C10orf140 ENSG00000180592 0.0019417 451 5 0.000000 349 5 0.0081633 183 5 0.0015267 484 5 0.022109 150 7 0.0049991 733 5 0.0030395 144 7 0.000000 180 5 0.000000 349 7 0.0000000 235 5 0.0035714 287 5 0.0092166 182 5 0.176106 244 5 0.0048426 298 5 0.024327 274 5 0.0258687 107 5 0.0064103 69 5 0.016758 546 5 0.1029155 158 5 0.0017857 405 5 0.083333 61 5 0.047619 157 5 0.017200 214 5 0.061261 203 5 0.000000 59 5 0.0062034 324 5 0.000000 175 5 0.0700331 167 6 0.021829 178 5 0.0172514 382 7 0.0263158 281 7 0.075225 502 5 0.0019569 250 7 0.0119048 47 2 0.000000 204 5 0.00000 12 2 0.095468 306 5 0.0018083 272 5 0.0022472 408 5 0.16894977 316 5 0.00000000 372 5 0.172863 312 5 0.000000 356 5 0.0013756 0.0000000 0.0080965 0.003016 0.025107 0.0054737 0.0084063 0.000000 0.0000000 0.0000000 0.0098774 0.0091412 0.0130176 0.004803 0.023615 0.050018 0.015196 0.020777 0.0127861 0.0017711 0.000000 0.000000 0.028077 0.029562 0.000000 0.0087651 0.000000 0.015003 0.022630 0.00422953 0.0024858 0.0054543 0.0054123 0.012845 0.00000000 0.00000 0.015313 0.0050012 0.0015920 0.0019410 0.0000000 0.0109622 0.000000 5 0.0073782 0.013319 -0.00414476 5 0.016140 0.037179 -0.0210395 0.9631260 0.1147286 insignificant 1 1 insignificant 0.91096323 0.193046 insignificant 1.00000 1 insignificant -0.0148436 0.264527 insignificant 1 insignificant 0.0073782 0.0054995 0.00187110 5 0.016140 0.020156 -0.0040162 4.0177e-01 9.5564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4753e-01 9.8390e-01 insignificant 1.000e+00 1.0000e+00 insignificant 0.0021560 9.0850e-01 lowCoverage 1.0000e+00 lowCoverage 0.0074266 0.0039683 0.0023132 5 0.018830 0.168600 -0.14976978 3.7759e-01 1.9436e-02 inconclusive 1.0000e+00 1.0000000 insignificant 2.9053e-01 0.16968185 insignificant 1.0000e+00 1.00000 insignificant -0.0481330 0.3177651 insignificant 1.00000 insignificant 0.013319 0.0054995 0.0065165 5 0.037179 0.020156 0.0170233 1.4766e-01 9.4214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5404e-01 9.8499e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0169996 3.6677e-01 lowCoverage 1.0000e+00 lowCoverage 0.013478 0.0039683 0.0061361 5 0.043376 0.168600 -0.1252237 1.9446e-01 4.2411e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 2.9148e-01 5.5874e-01 insignificant 1.00000000 1.000000 insignificant -0.0332894 0.47482877 insignificant 1.000000 insignificant 0.005530 0.0039683 -0.00016122 5 0.023515 0.168600 -0.1450842 7.2702e-01 6.3045e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4562e-01 2.4031e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0502889 3.0847e-01 lowCoverage 1.00000000 lowCoverage chr10 21886135 21887135 98898 MLLT10 ENSG00000078403 0.8818462 93 2 0.829189 89 5 0.8322944 90 5 0.7583333 54 2 0.846154 93 5 0.8475683 208 5 0.8913420 120 5 0.889973 74 5 0.851030 76 5 0.8154378 58 4 0.8823281 167 5 0.7844444 63 5 0.866667 96 2 0.6550000 32 2 0.896272 82 2 0.6944444 28 2 0.7569444 25 2 0.894737 69 2 0.8523256 78 2 0.8441016 150 5 0.604167 27 2 0.737500 23 2 0.907256 73 2 0.869048 55 5 0.848485 29 2 0.8709463 170 5 0.766667 20 2 0.9000000 21 2 0.894559 106 2 0.8604590 134 5 0.8772807 188 5 0.898379 135 5 0.9214286 56 5 0.8687500 46 2 0.850370 104 5 0.43333 13 1 0.821154 69 2 0.8887613 145 5 0.8740299 114 5 0.90087146 100 2 0.80285412 65 2 0.703125 92 2 0.749686 68 2 0.6634114 0.5464160 0.5732919 0.705072 0.648829 0.5809322 0.6733484 0.675032 0.5406925 0.7475456 0.7090546 0.4202899 0.6159420 0.557609 0.680778 0.601449 0.716787 0.664760 0.6814965 0.6213209 0.670290 0.695652 0.714483 0.757764 0.533597 0.6731169 0.347826 0.673913 0.675807 0.68099155 0.6913043 0.6934730 0.7872671 0.610054 0.55716586 0.36232 0.665412 0.6862515 0.8157041 0.7036090 0.7566872 0.6127717 0.693793 2 0.7340974 0.749235 -0.03282137 5 0.854587 0.868639 -0.0140527 0.8180115 0.1443818 insignificant 1 1 insignificant 0.91451866 0.272280 insignificant 1.00000 1 insignificant -0.0077073 0.800628 lowCoverage 1 lowCoverage 0.7340974 0.8036952 -0.01140380 5 0.854587 0.874513 -0.0199261 8.6528e-01 1.6284e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3386e-01 3.4933e-01 insignificant 1.000e+00 1.0000e+00 insignificant 0.0312220 6.9551e-01 lowCoverage 1.0000e+00 lowCoverage 0.7340974 0.7380410 -0.0535324 2 0.854587 0.864681 -0.01009440 5.5792e-01 6.3444e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.5954e-01 0.06171978 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0224084 0.5973685 lowCoverage 1.00000 lowCoverage 0.749235 0.8036952 0.0166380 5 0.868639 0.874513 -0.0058734 4.6066e-01 3.4715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9126e-01 5.1312e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0389293 6.3705e-01 lowCoverage 1.0000e+00 lowCoverage 0.749235 0.7380410 -0.0154372 2 0.868639 0.864681 0.0039583 5.4952e-01 2.6833e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4507e-01 2.3445e-01 lowCoverage 1.00000000 1.000000 lowCoverage 0.0301157 0.52398659 lowCoverage 1.000000 lowCoverage 0.803695 0.7380410 -0.04419824 2 0.874513 0.864681 0.0098317 8.6554e-01 5.2352e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9651e-01 2.7945e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0088136 9.1815e-01 lowCoverage 1.00000000 lowCoverage chr10 23439173 23440173 98958 MSRB2 ENSG00000148450 0.8251876 302 5 0.821597 155 6 0.8908677 135 6 0.6869754 199 5 0.891414 48 5 0.9534061 193 5 0.8962843 63 5 0.907947 142 5 0.832733 155 5 0.9298654 105 5 0.7823012 131 5 0.9095238 31 4 0.868162 182 5 NA 0 0 0.937549 94 5 0.9000000 29 3 0.8588235 65 5 0.687014 229 6 0.8835561 102 5 0.8482470 142 6 0.676667 36 4 0.615197 101 5 0.871272 154 6 0.742125 47 5 0.861667 59 5 0.8498171 241 6 0.847619 50 5 0.8800000 25 3 0.853389 165 5 0.9479816 207 6 0.8719569 203 6 0.907132 236 6 0.9062187 184 6 0.9755556 122 5 0.795584 167 5 0.91667 57 5 0.971429 61 5 0.9009966 200 6 0.5539303 299 6 0.67471498 274 6 0.59849801 203 6 0.743672 417 6 0.568583 257 6 0.8559602 0.8099374 0.8981417 0.824273 0.898363 0.9446783 0.8862947 0.908571 0.8365336 0.9178436 0.7646851 0.9094631 0.8692231 NA 0.929005 0.876592 0.833271 0.758142 0.8954494 0.9021206 0.635138 0.619898 0.891424 0.749950 0.891030 0.8639422 0.840764 0.859873 0.858509 0.94162429 0.8969347 0.8867421 0.9115912 0.977707 0.97018594 0.91401 0.980892 0.9626938 0.5262575 0.6490663 0.6766197 0.7424046 0.552568 4 0.8592000 0.859580 -0.00059557 5 0.856977 0.855256 0.0017207 0.6222329 0.4918413 insignificant 1 1 insignificant 0.27862845 0.876441 insignificant 1.00000 1 insignificant 0.0314290 0.352780 lowCoverage 1 lowCoverage 0.8589129 0.9266751 -0.08434118 5 0.805980 0.810111 -0.0041307 9.8898e-01 4.9793e-06 weaklyHypometh 1.0000e+00 1.6598e-03 weaklyHypometh 9.9844e-01 3.3676e-05 weaklyHypometh 1.000e+00 1.1225e-02 weaklyHypometh -0.0525774 1.2904e-01 lowCoverage 1.0000e+00 lowCoverage 0.8592000 0.6275862 0.2271559 5 0.856977 0.633716 0.22326154 1.2591e-18 1.0000e+00 hypermethylated 6.2955e-16 1.0000000 hypermethylated 1.7665e-10 0.99999960 hypermethylated 4.4163e-08 1.00000 hypermethylated 0.2306180 0.0011410 lowCoverage 0.13844 lowCoverage 0.859580 0.9348659 -0.0810472 5 0.855256 0.924296 -0.0690399 9.9388e-01 5.9068e-04 weaklyHypometh 1.0000e+00 1.9689e-01 insignificant 9.6281e-01 4.8077e-05 weaklyHypometh 1.0000e+00 1.6026e-02 weaklyHypometh -0.0840064 4.7879e-02 weaklyHypometh 1.0000e+00 insignificant 0.859580 0.6275862 0.2261127 5 0.855256 0.633716 0.2215408 1.9888e-11 1.0000e+00 hypermethylated 6.6294e-09 1.0000e+00 hypermethylated 4.0319e-07 1.0000e+00 hypermethylated 0.00014985 1.000000 hypermethylated 0.1991890 0.00165832 weaklyHypermeth 0.236903 insignificant 0.934866 0.6275862 0.30240412 6 0.924296 0.633716 0.2905807 1.4285e-15 1.0000e+00 hypermethylated 7.1424e-13 1.0000e+00 hypermethylated 5.5543e-08 1.0000e+00 hypermethylated 2.7771e-05 1.0000e+00 hypermethylated 0.2831954 2.4649e-04 hypermethylated 0.02738729 hypermethylated chr10 23439370 23440370 98959 MSRB2 ENSG00000148450 0.8251876 302 5 0.821597 155 6 0.8908677 135 6 0.6869754 199 5 0.891414 48 5 0.9534061 193 5 0.8962843 63 5 0.907947 142 5 0.832733 155 5 0.9298654 105 5 0.7823012 131 5 0.9095238 31 4 0.868162 182 5 NA 0 0 0.937549 94 5 0.9000000 29 3 0.8588235 65 5 0.687014 229 6 0.8835561 102 5 0.8482470 142 6 0.676667 36 4 0.615197 101 5 0.871272 154 6 0.742125 47 5 0.861667 59 5 0.8498171 241 6 0.847619 50 5 0.8800000 25 3 0.853389 165 5 0.9479816 207 6 0.8719569 203 6 0.907132 236 6 0.9062187 184 6 0.9755556 122 5 0.795584 167 5 0.91667 57 5 0.971429 61 5 0.9009966 200 6 0.5539303 299 6 0.67471498 274 6 0.59849801 203 6 0.743672 417 6 0.568583 257 6 0.8559602 0.8099374 0.8981417 0.824273 0.898363 0.9446783 0.8862947 0.908571 0.8365336 0.9178436 0.7646851 0.9094631 0.8692231 NA 0.929005 0.876592 0.833271 0.758142 0.8954494 0.9021206 0.635138 0.619898 0.891424 0.749950 0.891030 0.8639422 0.840764 0.859873 0.858509 0.94162429 0.8969347 0.8867421 0.9115912 0.977707 0.97018594 0.91401 0.980892 0.9626938 0.5262575 0.6490663 0.6766197 0.7424046 0.552568 4 0.8592000 0.859580 -0.00059557 5 0.856977 0.855256 0.0017207 0.6222329 0.4918413 insignificant 1 1 insignificant 0.27862845 0.876441 insignificant 1.00000 1 insignificant 0.0314290 0.352780 lowCoverage 1 lowCoverage 0.8589129 0.9266751 -0.08434118 5 0.805980 0.810111 -0.0041307 9.8898e-01 4.9793e-06 weaklyHypometh 1.0000e+00 1.6598e-03 weaklyHypometh 9.9844e-01 3.3676e-05 weaklyHypometh 1.000e+00 1.1225e-02 weaklyHypometh -0.0525774 1.2904e-01 lowCoverage 1.0000e+00 lowCoverage 0.8592000 0.6275862 0.2271559 5 0.856977 0.633716 0.22326154 1.2591e-18 1.0000e+00 hypermethylated 6.2955e-16 1.0000000 hypermethylated 1.7665e-10 0.99999960 hypermethylated 4.4163e-08 1.00000 hypermethylated 0.2306180 0.0011410 lowCoverage 0.13844 lowCoverage 0.859580 0.9348659 -0.0810472 5 0.855256 0.924296 -0.0690399 9.9388e-01 5.9068e-04 weaklyHypometh 1.0000e+00 1.9689e-01 insignificant 9.6281e-01 4.8077e-05 weaklyHypometh 1.0000e+00 1.6026e-02 weaklyHypometh -0.0840064 4.7879e-02 weaklyHypometh 1.0000e+00 insignificant 0.859580 0.6275862 0.2261127 5 0.855256 0.633716 0.2215408 1.9888e-11 1.0000e+00 hypermethylated 6.6294e-09 1.0000e+00 hypermethylated 4.0319e-07 1.0000e+00 hypermethylated 0.00014985 1.000000 hypermethylated 0.1991890 0.00165832 weaklyHypermeth 0.236903 insignificant 0.934866 0.6275862 0.30240412 6 0.924296 0.633716 0.2905807 1.4285e-15 1.0000e+00 hypermethylated 7.1424e-13 1.0000e+00 hypermethylated 5.5543e-08 1.0000e+00 hypermethylated 2.7771e-05 1.0000e+00 hypermethylated 0.2831954 2.4649e-04 hypermethylated 0.02738729 hypermethylated chr10 29263650 29264650 99149 ENSG00000216946 0.73381 161 7 0.61504 190 8 0.56845 134 7 0.70093 201 7 0.64238 81 7 0.77379 387 7 0.60653 177 7 0.67310 166 7 0.64021 108 7 0.67608 118 6 0.70786 204 8 0.69093 127 6 0.68074 112 7 NA 0 0 0.71091 93 7 0.71955 113 6 0.70833 53 4 0.62350 196 7 0.67744 96 4 0.72213 237 7 0.72771 52 6 0.71261 95 6 0.71046 107 7 0.74513 76 7 0.62514 70 6 0.67796 238 8 0.74667 87 7 0.66667 23 0 0.68698 72 6 0.65468 221 8 0.72687 188 7 0.73295 369 7 0.59792 132 8 0.51016 123 7 0.48490 213 7 0.61905 28 1 0.55551 82 5 0.45903 197 8 0.72171 160 7 0.65324 178 8 0.69410 175 8 0.58377 77 6 0.67176 203 8 0.60649 0.52726 0.51478 0.59597 0.50380 0.66966 0.55112 0.58568 0.52140 0.55176 0.65809 0.62499 0.60234 NA 0.67639 0.57363 0.65762 0.68882 0.64451 0.54826 0.64569 0.64557 0.64852 0.62740 0.60205 0.58773 0.67401 0.49275 0.61693 0.53018 0.62039 0.64903 0.57016 0.58426 0.52619 0.63109 0.52891 0.52811 0.62205 0.61614 0.62807 0.64127 0.59718 4 0.62691 0.64018 -0.01133783 7 0.69109 0.70904 -1.7951e-02 0.825630 0.20338606 insignificant 1 1.00000 insignificant 0.941337 0.146196 insignificant 1 1 insignificant -0.0236941 0.153090 insignificant 1 insignificant 0.62682 0.47355 0.1287768 7 0.66986 0.56628 0.1035839 2.1200e-13 0.2719129 weaklyHypermeth 2.3555e-11 1 weaklyHypermeth 9.2748e-04 0.5324019 weaklyHypermeth 4.4166e-02 1 weaklyHypermeth 0.1396972 1.6628e-03 weaklyHypermeth 1.1877e-01 insignificant 0.62682 0.61665 0.0147035 7 0.66986 0.70520 -0.0353436 0.023756 0.2783053 weaklyHypermeth 1 1.00000 insignificant 0.18411 2.1364e-01 insignificant 1 1.000000 insignificant 0.0125408 0.64663131 insignificant 1.00000 insignificant 0.64018 0.47287 0.128238 7 0.70904 0.51206 0.196983 1.4904e-11 0.837331 weaklyHypermeth 1.4904e-09 1 weaklyHypermeth 7.6447e-04 0.919859 weaklyHypermeth 4.0235e-02 1 weaklyHypermeth 0.1633914 7.1627e-04 weaklyHypermeth 5.5098e-02 weaklyHypermeth 0.64018 0.61616 0.02098918 7 0.70904 0.66835 0.0406896 0.0214447 0.6362302 weaklyHypermeth 1.00000 1 insignificant 0.101288 0.6547282 insignificant 1 1 insignificant 0.0362350 0.2106887 insignificant 1.00000 insignificant 0.47355 0.61665 -0.146455 7 0.56628 0.70520 -0.138927 0.9864623 2.3058e-04 weaklyHypometh 1 1.2136e-02 weaklyHypometh 0.9847112 4.3141e-02 weaklyHypometh 1 1.00000000 insignificant -0.1271564 5.3816e-03 weaklyHypometh 0.3363481 insignificant chr10 34161158 34162158 99364 NRP1 ENSG00000099250 0.81925 286 9 0.64492 164 9 0.71866 145 9 0.82622 192 9 0.73307 98 9 0.74900 370 9 0.74665 122 9 0.74762 185 9 0.78005 79 4 0.73537 107 9 0.67523 286 9 0.52011 80 6 0.72520 138 9 0.84286 25 4 0.82725 152 9 0.83874 80 7 0.62571 80 6 0.73905 219 9 0.70210 220 9 0.79704 357 9 0.87111 70 7 0.72413 107 7 0.77647 188 9 0.79355 76 7 0.76008 75 5 0.82848 248 9 0.78372 123 7 0.75521 50 5 0.82232 119 7 0.77618 188 9 0.68796 216 9 0.73569 399 9 0.77216 196 9 0.71363 143 9 0.66901 192 9 0.90340 65 6 0.61246 125 9 0.74040 261 9 0.68261 309 9 0.86266 214 9 0.75581 222 9 0.77855 224 9 0.84181 287 9 0.82395 0.65040 0.75571 0.85401 0.80680 0.79838 0.77237 0.77549 0.77182 0.74621 0.78021 0.56932 0.83487 0.84362 0.77934 0.84051 0.64580 0.77441 0.77020 0.81626 0.87200 0.79843 0.79789 0.75679 0.86796 0.80329 0.83482 0.79739 0.81682 0.80733 0.77116 0.77776 0.74128 0.71419 0.69566 0.91153 0.67689 0.78012 0.81682 0.86610 0.83203 0.81082 0.85921 5 0.78050 0.78644 -0.00974739 9 0.74359 0.75002 -6.4309e-03 0.663385 0.47688822 insignificant 1 1.00000 insignificant 0.926008 0.112700 insignificant 1 1 insignificant -0.0365368 0.123039 insignificant 1 insignificant 0.78050 0.72811 0.0468669 9 0.74359 0.74499 -0.0013969 9.9808e-04 0.9515780 weaklyHypermeth 2.8516e-02 1 weaklyHypermeth 4.9481e-02 0.8736031 weaklyHypermeth 1.0000e+00 1 insignificant 0.0045286 9.2172e-01 insignificant 1.0000e+00 insignificant 0.78050 0.83121 -0.0462942 9 0.74359 0.76040 -0.0168103 0.861565 0.0171490 weaklyHypometh 1 1.00000 insignificant 0.97157 1.2763e-02 weaklyHypometh 1 1.000000 insignificant -0.0445850 0.26662527 insignificant 1.00000 insignificant 0.78644 0.72811 0.056285 9 0.75002 0.74499 0.005034 7.0420e-03 0.979481 weaklyHypermeth 1.7176e-01 1 insignificant 2.1859e-02 0.984990 weaklyHypermeth 6.2454e-01 1 insignificant 0.0410654 3.7602e-01 insignificant 1.0000e+00 insignificant 0.78644 0.83121 -0.03434879 9 0.75002 0.76040 -0.0103794 0.9627497 0.0418088 weaklyHypometh 1.00000 1 insignificant 0.885768 0.1798982 insignificant 1 1 insignificant -0.0080482 0.8270096 insignificant 1.00000 insignificant 0.72811 0.83121 -0.096607 9 0.74499 0.76040 -0.015413 0.9995042 1.1941e-04 weaklyHypometh 1 7.9610e-03 weaklyHypometh 0.9946340 2.9392e-03 weaklyHypometh 1 0.17743967 insignificant -0.0491136 3.6830e-01 insignificant 1.0000000 insignificant chr10 34752841 34753841 99443 PARD3 ENSG00000148498 0.96183 229 5 0.85492 76 5 0.94376 94 5 0.93098 130 5 0.96905 60 5 0.89960 194 5 0.93601 92 5 0.97128 135 5 0.82210 103 5 1.00000 95 5 0.95510 112 5 0.86417 70 5 0.96643 110 5 NA 0 0 0.92103 143 5 0.96250 44 5 0.86667 52 5 0.90667 83 5 0.96753 54 5 0.91800 187 5 0.86530 49 5 0.81310 45 5 0.89288 81 5 0.55571 32 4 0.92500 35 4 0.96828 138 5 0.92143 47 5 0.68000 38 5 0.91228 125 5 0.98412 185 5 0.95762 138 5 0.91584 263 5 0.95197 79 5 0.99130 107 5 0.98667 92 5 0.96364 53 5 0.50794 39 5 0.95750 167 5 0.93697 245 5 0.97122 241 5 0.97281 186 5 0.96499 160 5 0.98469 188 5 0.96106 0.85504 0.94261 0.93154 0.96799 0.89930 0.93536 0.97070 0.82230 1.00000 0.95397 0.86262 0.96555 NA 0.92108 0.96173 0.86635 0.90614 0.96641 0.91854 0.86634 0.81066 0.89039 0.55175 0.92921 0.96919 0.92304 0.68622 0.91276 0.98379 0.95622 0.91722 0.95099 0.99113 0.98605 0.96289 0.51498 0.95743 0.93594 0.97032 0.97225 0.96498 0.98424 5 0.92971 0.91156 0.01890765 5 0.92761 0.91150 1.6109e-02 0.112968 0.82140820 insignificant 1 1.00000 insignificant 0.020431 0.775198 weaklyHypermeth 1 1 insignificant 0.0612797 0.134176 lowCoverage 1 lowCoverage 0.92971 0.94041 -0.0121997 5 0.92761 0.93917 -0.0115542 8.7985e-01 0.3717994 insignificant 1.0000e+00 1 insignificant 9.3844e-01 0.2052547 insignificant 1.0000e+00 1 insignificant 0.0340737 6.8010e-01 lowCoverage 1.0000e+00 lowCoverage 0.92971 0.96471 -0.0359616 5 0.92761 0.96525 -0.0376338 0.997598 0.0142601 weaklyHypometh 1 1.00000 insignificant 0.99830 4.2273e-02 weaklyHypometh 1 1.000000 insignificant -0.0388897 0.00985223 lowCoverage 0.74940 lowCoverage 0.91156 0.94041 -0.029240 5 0.91150 0.93917 -0.027663 9.3434e-01 0.288631 insignificant 1.0000e+00 1 insignificant 9.8994e-01 0.048753 weaklyHypometh 1.0000e+00 1 insignificant -0.0272060 7.5949e-01 lowCoverage 1.0000e+00 lowCoverage 0.91156 0.96471 -0.05435248 5 0.91150 0.96525 -0.0537425 0.9962082 0.0430891 weaklyHypometh 1.00000 1 insignificant 0.997965 0.0127611 weaklyHypometh 1 1 insignificant -0.1001694 0.0206911 lowCoverage 1.00000 lowCoverage 0.94041 0.96471 -0.024420 5 0.93917 0.96525 -0.026080 0.8748703 4.3527e-01 insignificant 1 1.0000e+00 insignificant 0.6764576 7.6768e-01 insignificant 1 1.00000000 insignificant -0.0729634 3.9012e-01 insignificant 1.0000000 insignificant chr10 37170954 37171954 99540 ENSG00000207271 0.79536 159 5 0.80007 68 5 0.75548 88 5 0.82451 110 5 0.84062 43 5 0.84479 157 5 0.77500 58 5 0.90000 52 5 0.69563 38 5 0.78886 76 5 0.81443 105 5 0.77274 76 5 0.87975 85 5 NA 0 0 0.75513 61 5 0.76190 51 5 0.68364 35 3 0.88286 103 5 0.78400 94 5 0.84498 169 5 0.82667 28 5 0.77576 58 5 0.84976 127 5 0.77143 23 3 0.86364 46 5 0.85566 115 5 0.80952 35 3 0.89394 45 5 0.79817 61 5 0.80951 75 5 0.87578 112 5 0.82215 195 5 0.77692 71 5 0.64507 89 5 0.64478 102 5 0.69167 58 5 0.77333 40 5 0.80429 99 5 0.87105 187 5 0.87240 144 5 0.88308 110 5 0.86791 139 5 0.83480 197 5 0.78766 0.80007 0.76150 0.81949 0.83529 0.84004 0.77525 0.90034 0.68434 0.78851 0.80857 0.77547 0.87583 NA 0.74495 0.75758 0.67502 0.88175 0.77697 0.83923 0.82222 0.77594 0.85226 0.78788 0.86088 0.85341 0.80556 0.89256 0.79731 0.80623 0.87679 0.82056 0.77273 0.63958 0.64201 0.69192 0.76465 0.79747 0.86914 0.87200 0.87991 0.86633 0.83412 5 0.81634 0.83913 -0.03000166 5 0.81306 0.83773 -2.4668e-02 0.718890 0.00475109 weaklyHypometh 1 0.79185 insignificant 0.707727 0.018357 weaklyHypometh 1 1 insignificant -0.0293445 0.104032 lowCoverage 1 lowCoverage 0.81634 0.70370 0.1033825 5 0.81306 0.70859 0.1044772 1.3588e-05 0.9999999 weaklyHypermeth 5.4353e-04 1 weaklyHypermeth 3.8377e-03 0.9996161 weaklyHypermeth 1.3706e-01 1 insignificant 0.0773107 4.4787e-02 lowCoverage 1.0000e+00 lowCoverage 0.81634 0.86873 -0.0503691 5 0.81306 0.86390 -0.0508312 0.994470 0.0154734 weaklyHypometh 1 1.00000 insignificant 0.99022 3.8837e-03 weaklyHypometh 1 0.801491 insignificant -0.0658632 0.00040934 lowCoverage 0.20467 lowCoverage 0.83913 0.70370 0.134671 5 0.83773 0.70859 0.129145 3.2868e-08 0.999998 weaklyHypermeth 2.1912e-06 1 weaklyHypermeth 1.9541e-05 0.996235 weaklyHypermeth 1.9541e-03 1 weaklyHypermeth 0.1066551 1.2189e-02 lowCoverage 5.5404e-01 lowCoverage 0.83913 0.86873 -0.02414833 5 0.83773 0.86390 -0.0261636 0.8322104 0.0865816 insignificant 1.00000 1 insignificant 0.877133 0.0584782 insignificant 1 1 insignificant -0.0365187 0.0193541 lowCoverage 1.00000 lowCoverage 0.70370 0.86873 -0.158303 5 0.70859 0.86390 -0.155308 0.9999999 3.4602e-07 weaklyHypometh 1 4.3252e-05 weaklyHypometh 0.9999857 1.7381e-05 weaklyHypometh 1 0.00434519 weaklyHypometh -0.1431738 3.4794e-03 weaklyHypometh 0.2485304 insignificant chr10 37576620 37577620 99557 ENSG00000220479 0.75448 199 7 0.89109 155 5 0.75130 128 5 0.70815 111 5 1.00000 1 0 0.74452 179 5 0.80000 5 1 0.66667 9 1 0.80000 5 1 0.80000 5 1 0.87500 16 1 NA 0 0 1.00000 11 1 0.66667 4 0 1.00000 4 0 1.00000 2 0 0.00000 2 0 0.67837 117 5 0.87500 16 1 0.75351 144 5 1.00000 5 1 1.00000 11 1 0.76025 106 5 0.85714 7 1 1.00000 7 1 0.75942 159 5 0.50000 2 0 1.00000 3 0 0.93750 16 1 0.84451 126 5 0.82189 161 5 0.67813 243 5 0.70793 140 5 0.80000 5 1 0.72100 81 5 1.00000 1 0 0.70000 10 1 0.81321 184 5 0.75542 177 4 0.78657 168 4 0.75164 166 7 0.84099 166 5 0.79665 154 6 0.92453 0.89474 1.00000 0.86667 1.00000 0.87302 0.80000 1.00000 0.80000 0.80000 0.87500 NA 1.00000 1.00000 1.00000 1.00000 0.00000 0.90625 0.87500 0.89583 1.00000 1.00000 0.89655 0.85714 1.00000 0.80000 0.50000 1.00000 0.93750 1.00000 0.95455 0.93750 0.71429 0.80000 0.77778 1.00000 0.70000 0.86364 0.95652 0.97826 0.97500 0.94872 0.95455 0 0.81042 0.81560 -0.00029506 4 0.72938 0.63812 9.1253e-02 0.116475 0.89624493 lowCoverage 1 1.00000 lowCoverage 0.263178 0.975617 lowCoverage 1 1 lowCoverage -0.0694785 0.313612 lowCoverage 1 lowCoverage 0.82216 0.75297 0.0663753 4 0.83113 0.75726 0.0738671 1.2973e-03 0.9805876 lowCoverage 3.6037e-02 1 lowCoverage 9.1317e-03 0.9821356 lowCoverage 2.8536e-01 1 lowCoverage -0.0132640 8.4903e-01 lowCoverage 1.0000e+00 lowCoverage 0.81042 0.84838 -0.0516516 4 0.72938 0.75858 -0.0292054 0.991734 0.0837743 lowCoverage 1 1.00000 lowCoverage 0.99842 1.1578e-01 lowCoverage 1 1.000000 lowCoverage -0.0091595 0.86495506 lowCoverage 1.00000 lowCoverage 0.82024 0.75297 0.063470 5 0.82671 0.75726 0.069446 3.8353e-03 0.886237 weaklyHypermeth 9.7115e-02 1 weaklyHypermeth 7.2193e-02 0.986044 insignificant 1.0000e+00 1 insignificant 0.0562145 3.9901e-01 lowCoverage 1.0000e+00 lowCoverage 0.81560 0.84838 -0.05323155 4 0.63812 0.75858 -0.1204583 0.9999030 0.0082727 lowCoverage 1.00000 1 lowCoverage 0.999958 0.0329807 lowCoverage 1 1 lowCoverage 0.0603190 0.2282930 lowCoverage 1.00000 lowCoverage 0.75297 0.86267 -0.113504 4 0.75726 0.87535 -0.118088 0.9999080 1.8173e-05 lowCoverage 1 1.5144e-03 lowCoverage 0.9999294 1.3895e-03 lowCoverage 1 0.10688416 lowCoverage 0.0041045 9.3597e-01 lowCoverage 1.0000000 lowCoverage chr10 43494420 43495420 99660 ZNF32 ENSG00000169740 0.93682 167 5 0.84716 112 5 0.82605 157 5 0.91329 158 5 0.86734 73 5 0.89033 301 5 0.93844 128 5 0.84594 128 5 0.83739 142 5 0.93559 118 5 0.91444 158 5 0.88718 86 5 0.92793 143 5 0.91309 93 5 0.89087 196 5 0.78356 66 5 0.61667 16 2 0.88080 174 5 0.90677 156 5 0.93448 215 5 0.81762 45 5 0.84462 98 5 0.72197 117 5 0.78947 72 5 0.92071 43 3 0.95592 176 5 0.75598 123 5 0.73081 111 4 0.77507 129 5 0.94710 233 5 0.91959 221 5 0.91332 193 5 0.17742 203 5 0.20003 76 4 0.24545 160 5 0.35972 33 3 0.19656 243 5 0.35907 270 5 0.96255 156 5 0.82484 117 5 0.87675 104 5 0.92068 102 5 0.68072 163 5 0.92152 0.83937 0.84346 0.91812 0.91197 0.86977 0.94076 0.84857 0.83469 0.94111 0.91084 0.86850 0.93041 0.89805 0.89272 0.93450 0.74283 0.85393 0.90740 0.92686 0.82035 0.84758 0.86325 0.95902 0.93273 0.95420 0.76629 0.90595 0.93465 0.94994 0.90843 0.89694 0.14063 0.15977 0.18087 0.27698 0.19939 0.26512 0.95039 0.81826 0.88868 0.92487 0.64779 5 0.89487 0.89942 -0.00965501 5 0.87866 0.75586 1.2280e-01 0.206185 0.40059803 insignificant 1 1.00000 insignificant 0.267502 0.400809 insignificant 1 1 insignificant 0.0336929 0.276088 lowCoverage 1 lowCoverage 0.89487 0.23249 0.6690225 5 0.87866 0.22777 0.6508945 3.7414e-56 1.0000000 hypermethylated 1.8707e-53 1 hypermethylated 8.3065e-11 1.0000000 hypermethylated 4.1532e-08 1 hypermethylated 0.6183311 3.3944e-07 lowCoverage 6.7888e-05 lowCoverage 0.89487 0.83489 0.0583535 5 0.87866 0.86902 0.0096461 0.043448 0.9858496 weaklyHypermeth 1 1.00000 insignificant 0.43208 9.3815e-01 insignificant 1 1.000000 insignificant 0.0215995 0.69265984 lowCoverage 1.00000 lowCoverage 0.89942 0.23249 0.657228 5 0.75586 0.22777 0.528093 1.4920e-38 1.000000 hypermethylated 1.4920e-35 1 hypermethylated 6.7093e-09 1.000000 hypermethylated 3.3546e-06 1 hypermethylated 0.5846382 4.0146e-08 lowCoverage 1.3382e-05 lowCoverage 0.89942 0.83489 0.06872706 5 0.75586 0.86902 -0.1131552 0.0094316 0.9986844 weaklyHypermeth 0.58947 1 insignificant 0.139324 0.5663213 insignificant 1 1 insignificant -0.0120934 0.8326293 lowCoverage 1.00000 lowCoverage 0.23249 0.83489 -0.633716 5 0.22777 0.86902 -0.641248 1.0000000 1.7231e-15 hypomethylated 1 8.6157e-13 hypomethylated 1.0000000 9.1553e-07 hypomethylated 1 0.00045777 hypomethylated -0.5967317 1.4143e-05 lowCoverage 0.0047145 lowCoverage chr10 43568699 43569699 99663 ENSG00000217335 0.72284 259 7 0.63787 234 7 0.90738 74 5 0.74711 268 6 0.74778 93 7 0.69624 333 7 0.81223 111 7 0.79647 89 5 0.68894 106 7 0.72660 59 3 0.84740 157 6 0.67679 66 3 0.67493 129 5 0.88889 42 4 0.82147 96 5 0.68516 42 2 0.64093 119 5 0.79162 411 6 0.60300 106 5 0.71251 279 7 0.81944 87 7 0.88725 45 2 0.90426 146 7 0.83208 83 7 0.89315 86 6 0.73491 159 7 0.71297 75 5 0.74034 53 5 0.79931 79 6 0.65533 172 7 0.64728 186 7 0.78331 214 6 0.80342 141 7 0.81746 102 7 0.78235 75 5 0.90000 18 1 0.77523 126 7 0.85965 187 7 0.73113 333 7 0.73392 273 7 0.71279 205 6 0.76242 167 6 0.66050 247 6 0.72623 0.69732 0.91910 0.79105 0.75535 0.74068 0.79885 0.82832 0.70957 0.76037 0.87468 0.75537 0.66682 0.88224 0.80289 0.78785 0.72328 0.79746 0.59748 0.72857 0.87531 0.81150 0.91009 0.88534 0.88386 0.75747 0.72883 0.77048 0.79843 0.78388 0.63612 0.78410 0.81616 0.80300 0.66974 0.80013 0.82319 0.87239 0.71728 0.78585 0.69220 0.72760 0.72867 2 0.75464 0.79913 -0.03736857 7 0.74334 0.78720 -4.3865e-02 0.985026 0.05189354 insignificant 1 1.00000 insignificant 0.960286 0.216128 insignificant 1 1 insignificant -0.0428289 0.189899 insignificant 1 insignificant 0.75464 0.81327 -0.0720488 7 0.74334 0.81897 -0.0756308 8.5758e-01 0.0037211 weaklyHypometh 1.0000e+00 1 insignificant 9.8313e-01 0.0098063 weaklyHypometh 1.0000e+00 1 insignificant -0.0817097 9.0086e-03 weaklyHypometh 4.5043e-01 insignificant 0.75464 0.75592 0.0194815 6 0.74334 0.71695 0.0263935 0.193721 0.5902696 insignificant 1 1.00000 insignificant 0.17527 6.1981e-01 insignificant 1 1.000000 insignificant 0.0211534 0.41671729 insignificant 1.00000 insignificant 0.79856 0.81356 -0.041856 7 0.68880 0.84160 -0.152795 8.7025e-01 0.059798 insignificant 1.0000e+00 1 insignificant 9.8986e-01 0.041894 weaklyHypometh 1.0000e+00 1 insignificant -0.0388808 2.4463e-01 insignificant 1.0000e+00 insignificant 0.79913 0.75592 0.05251403 6 0.78720 0.71695 0.0702588 0.0734312 0.8682122 insignificant 1.00000 1 insignificant 0.085821 0.7904959 insignificant 1 1 insignificant 0.0639823 0.0537068 insignificant 1.00000 insignificant 0.81327 0.75592 0.091130 6 0.81897 0.71695 0.102024 0.0016826 9.7228e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0072779 9.9876e-01 weaklyHypermeth 1 1.00000000 insignificant 0.1028631 3.2869e-03 weaklyHypermeth 0.2485304 insignificant chr10 45278923 45279923 99710 MARCH8 ENSG00000165406 0.93056 69 7 0.85911 122 7 0.78319 90 7 1.00000 20 2 0.86996 44 4 0.91867 60 6 0.84467 69 6 0.87075 65 7 0.81227 49 6 0.95098 68 7 0.86215 129 7 0.86508 29 3 0.90241 121 7 NA 0 0 0.91429 63 7 0.54167 9 0 0.83333 34 4 0.73810 22 0 0.90189 90 7 0.93774 78 7 0.92063 69 5 0.78571 10 0 0.88328 125 7 0.86980 54 4 0.33333 3 0 0.96758 62 7 0.83773 64 6 0.92381 46 7 0.91429 36 5 0.88165 69 6 0.90391 76 5 0.93214 73 7 0.72799 86 7 0.90002 103 7 0.60260 70 7 0.71429 17 0 0.81209 33 2 0.86043 73 7 0.94286 112 7 0.94127 47 4 0.92007 33 3 0.96703 43 2 0.78571 23 0 0.92577 0.86239 0.79317 1.00000 0.87268 0.92102 0.85030 0.88506 0.83643 0.95605 0.87443 0.87548 0.90054 NA 0.90805 0.66794 0.82184 0.74138 0.89776 0.95111 0.92193 0.82759 0.88212 0.87754 0.60193 0.97248 0.85466 0.93678 0.92759 0.89367 0.90209 0.94124 0.69782 0.90218 0.57602 0.77586 0.80606 0.86720 0.94828 0.93870 0.91790 0.96021 0.82759 0 0.87165 0.88937 -0.01848869 7 0.87288 0.89870 -2.5823e-02 0.919482 0.20400795 insignificant 1 1.00000 insignificant 0.914777 0.270328 insignificant 1 1 insignificant 0.0136765 0.801808 lowCoverage 1 lowCoverage 0.87165 0.79581 0.0795047 7 0.87288 0.77226 0.1006170 9.2612e-04 0.5483651 weaklyHypermeth 2.7239e-02 1 weaklyHypermeth 9.0348e-02 0.7682301 insignificant 1.0000e+00 1 insignificant 0.0902632 1.0998e-01 insignificant 1.0000e+00 insignificant 0.87165 0.92248 -0.0523892 6 0.87288 0.92877 -0.0558893 0.988370 0.0047016 weaklyHypometh 1 1.00000 insignificant 0.93603 1.1568e-02 weaklyHypometh 1 1.000000 insignificant -0.0515558 0.22527738 lowCoverage 1.00000 lowCoverage 0.88937 0.79581 0.102129 7 0.89870 0.77226 0.126440 1.2584e-03 0.573257 weaklyHypermeth 3.5953e-02 1 weaklyHypermeth 5.0327e-02 0.632603 insignificant 1.0000e+00 1 insignificant 0.0765867 2.6434e-01 lowCoverage 1.0000e+00 lowCoverage 0.88937 0.92248 -0.02798755 6 0.89870 0.92877 -0.0300661 0.8735126 0.0167760 weaklyHypometh 1.00000 1 insignificant 0.679224 0.0436237 weaklyHypometh 1 1 insignificant -0.0652324 0.2811998 lowCoverage 1.00000 lowCoverage 0.79581 0.92248 -0.155101 6 0.77226 0.92877 -0.156506 0.9971286 9.1278e-04 weaklyHypometh 1 3.5107e-02 weaklyHypometh 0.9993583 5.6227e-03 weaklyHypometh 1 0.28113552 insignificant -0.1418191 3.0912e-02 lowCoverage 1.0000000 lowCoverage chr10 45506958 45507958 99712 ENSG00000219897 0.84268 100 6 0.59780 49 4 0.87032 58 6 0.88762 147 7 0.73160 29 2 0.92458 103 6 0.70833 35 3 0.79892 79 6 0.78199 60 6 0.84091 47 6 0.87517 100 6 0.73611 28 2 0.78121 152 6 0.91837 23 2 0.80470 64 6 0.46667 22 2 0.81429 19 2 0.92408 108 6 0.73580 70 6 0.76005 68 6 0.80221 37 4 0.85574 74 6 0.76500 73 6 0.87672 57 6 0.79683 50 6 0.92745 67 6 0.84375 72 6 0.87194 36 4 0.82473 71 6 0.94077 85 6 0.85751 74 6 0.90409 116 7 0.84722 71 6 0.84152 62 6 0.80220 66 6 0.74892 36 2 0.83148 36 3 0.90351 80 7 0.98413 48 2 0.84881 95 6 0.85065 69 6 0.98889 46 5 0.89673 84 6 0.97529 0.61947 0.85342 0.98659 0.81436 0.89772 0.78773 0.81636 0.87120 0.93343 0.79968 0.76115 0.90147 0.86052 0.93626 0.44462 0.80472 0.93273 0.83378 0.82430 0.81979 0.88956 0.89295 0.81691 0.94226 0.89268 0.84843 0.95669 0.90082 0.93894 0.91779 0.95092 0.97375 0.95262 0.90612 0.89907 0.85674 0.91788 0.97288 0.96685 0.98890 0.98373 0.96360 2 0.85231 0.88424 -0.03629697 6 0.80604 0.86600 -5.9960e-02 0.997936 0.04928458 weaklyHypometh 1 1.00000 insignificant 0.993587 0.028040 weaklyHypometh 1 1 insignificant -0.0654999 0.034234 lowCoverage 1 lowCoverage 0.85231 0.90598 -0.0585930 6 0.80604 0.85597 -0.0499382 9.9317e-01 0.0252357 weaklyHypometh 1.0000e+00 1 insignificant 9.4477e-01 0.0146149 weaklyHypometh 1.0000e+00 1 insignificant -0.0390799 2.4716e-01 lowCoverage 1.0000e+00 lowCoverage 0.85231 0.95614 -0.1069307 6 0.80604 0.90322 -0.0971823 0.999937 0.0008377 weaklyHypometh 1 0.41885 insignificant 0.99998 2.0760e-05 weaklyHypometh 1 0.020760 weaklyHypometh -0.1237808 0.01095885 lowCoverage 0.74940 lowCoverage 0.88424 0.90598 -0.020272 6 0.86600 0.85597 0.010022 7.6827e-01 0.302513 insignificant 1.0000e+00 1 insignificant 5.5256e-01 0.381435 insignificant 1.0000e+00 1 insignificant 0.0264199 3.3213e-01 insignificant 1.0000e+00 insignificant 0.88424 0.95614 -0.06882300 6 0.86600 0.90322 -0.0372219 0.9990358 0.0041856 weaklyHypometh 1.00000 1 insignificant 0.999790 0.0044876 weaklyHypometh 1 1 insignificant -0.0582810 0.1413949 insignificant 1.00000 insignificant 0.90598 0.95614 -0.046345 6 0.85597 0.90322 -0.047244 0.9942819 1.0148e-01 insignificant 1 1.0000e+00 insignificant 0.9995377 8.2534e-02 insignificant 1 1.00000000 insignificant -0.0847009 5.6088e-02 insignificant 1.0000000 insignificant chr10 46619762 46620762 99746 FAM25B ENSG00000189090 0.70895 293 8 0.69110 154 8 0.63025 111 8 0.81870 210 8 0.72122 58 5 0.67384 265 8 0.64245 65 4 0.70066 157 8 0.66524 99 8 0.80288 122 8 0.68803 235 8 0.65104 35 4 0.77878 186 8 0.78290 76 5 0.70533 113 5 0.61944 30 4 0.45357 36 3 0.80471 314 8 0.72242 167 8 0.67088 205 8 0.63914 96 4 0.65823 86 7 0.74875 134 8 0.70976 107 7 0.66438 98 5 0.76899 199 8 0.75244 145 8 0.54671 79 3 0.64856 155 8 0.73708 181 8 0.78299 189 8 0.76577 275 8 0.61122 155 8 0.67402 120 8 0.74228 153 8 0.52415 41 4 0.53199 151 8 0.68473 227 8 0.79559 202 8 0.73817 222 8 0.75694 185 8 0.78220 100 5 0.81666 269 8 0.74079 0.74424 0.74456 0.84753 0.73383 0.68241 0.66298 0.74149 0.72672 0.75848 0.70709 0.60952 0.76170 0.84479 0.71486 0.73354 0.55429 0.82028 0.77973 0.71640 0.68876 0.64002 0.73928 0.65332 0.70752 0.78790 0.66596 0.53868 0.75072 0.74173 0.80561 0.78743 0.65730 0.77258 0.81864 0.67175 0.55611 0.75702 0.76690 0.78091 0.78982 0.78412 0.80796 4 0.74718 0.70528 0.01967510 8 0.73742 0.76492 -2.7492e-02 0.467231 0.32970388 insignificant 1 1.00000 insignificant 0.540784 0.746027 insignificant 1 1 insignificant -0.0052796 0.849846 insignificant 1 insignificant 0.74701 0.68241 0.0564649 8 0.71242 0.62205 0.0903759 1.0775e-02 0.9960527 weaklyHypermeth 2.4488e-01 1 insignificant 2.5699e-02 0.9984035 weaklyHypermeth 6.9458e-01 1 insignificant 0.0685537 1.2881e-01 insignificant 1.0000e+00 insignificant 0.74718 0.77812 -0.0488951 8 0.73742 0.81137 -0.0739428 0.997257 0.0222350 weaklyHypometh 1 1.00000 insignificant 0.99848 1.2533e-02 weaklyHypometh 1 1.000000 insignificant -0.0812936 0.00239447 weaklyHypometh 0.32020 insignificant 0.70511 0.68322 0.035062 8 0.73879 0.69116 0.047631 1.5992e-02 0.997621 weaklyHypermeth 3.6344e-01 1 insignificant 4.3223e-02 0.987198 weaklyHypermeth 1.0000e+00 1 insignificant 0.0738333 1.1021e-01 insignificant 1.0000e+00 insignificant 0.70528 0.77812 -0.07485935 8 0.76492 0.81137 -0.0464506 0.9991130 0.0257997 weaklyHypometh 1.00000 1 insignificant 0.999653 0.0254958 weaklyHypometh 1 1 insignificant -0.0760140 0.0078305 weaklyHypometh 0.97881 insignificant 0.68322 0.77789 -0.104956 8 0.69116 0.79041 -0.099243 0.9999992 3.0430e-05 weaklyHypometh 1 2.3407e-03 weaklyHypometh 0.9999724 5.1318e-05 weaklyHypometh 1 0.00855301 weaklyHypometh -0.1498472 7.0407e-03 weaklyHypometh 0.3911489 insignificant chr10 46633305 46634305 99748 FAM25B ENSG00000189090 0.95000 68 5 0.82605 64 4 0.87310 51 5 0.86038 93 5 0.92424 28 1 0.83253 95 5 0.75000 25 1 0.87576 45 1 0.84842 35 4 0.91394 58 5 0.90365 64 2 0.87000 27 2 0.89342 45 4 0.94737 19 1 1.00000 39 1 0.65000 20 1 0.80000 9 0 0.88556 101 5 0.73000 66 1 0.82028 73 5 0.76667 22 1 0.85057 57 5 0.96095 61 5 0.81667 38 3 0.87500 41 4 0.96032 58 4 0.76839 51 3 0.85000 38 3 0.85259 45 3 0.84750 77 5 0.94723 82 4 0.88608 87 5 0.82222 57 4 0.78278 47 5 0.98824 48 2 0.85333 37 4 0.92096 76 5 0.87273 76 5 0.80890 62 5 0.93869 106 5 0.95258 76 5 0.95366 69 5 0.92328 83 5 0.97549 0.87916 0.91655 0.91511 0.93969 0.86692 0.87371 0.87730 0.84520 0.94236 0.90745 0.93627 0.86726 NA 1.00000 0.78595 0.90196 0.91558 0.81667 0.86092 0.88562 0.89676 0.96629 0.74020 0.93873 0.95223 0.75490 0.92647 0.90886 0.89338 0.94159 0.92595 0.85621 0.83687 0.96424 0.75817 0.88015 0.86809 0.86711 0.96995 0.95358 0.93480 0.92463 1 0.88976 0.88889 -0.00067772 5 0.85981 0.86866 -8.8563e-03 0.679680 0.49728918 insignificant 1 1.00000 insignificant 0.696271 0.504613 insignificant 1 1 insignificant -0.0074299 0.780356 lowCoverage 1 lowCoverage 0.88976 0.88563 0.0073780 5 0.85981 0.88504 -0.0252372 3.0175e-01 0.1152022 insignificant 1.0000e+00 1 insignificant 2.3116e-01 0.1870912 insignificant 1.0000e+00 1 insignificant -0.0156417 6.6513e-01 lowCoverage 1.0000e+00 lowCoverage 0.88976 0.92929 -0.0422547 5 0.85981 0.92050 -0.0606950 0.994711 0.0427100 weaklyHypometh 1 1.00000 insignificant 0.94972 2.6428e-01 insignificant 1 1.000000 insignificant -0.0576879 0.11593405 lowCoverage 1.00000 lowCoverage 0.88889 0.88563 0.005402 5 0.86866 0.88504 -0.016381 6.9874e-01 0.196167 insignificant 1.0000e+00 1 insignificant 3.6051e-01 0.134450 insignificant 1.0000e+00 1 insignificant -0.0082117 8.2154e-01 lowCoverage 1.0000e+00 lowCoverage 0.88889 0.92929 -0.04256674 5 0.86866 0.92050 -0.0518387 0.9873860 0.0906231 insignificant 1.00000 1 insignificant 0.879799 0.2001563 insignificant 1 1 insignificant -0.0502579 0.1677335 lowCoverage 1.00000 lowCoverage 0.88563 0.92929 -0.045086 5 0.88504 0.92050 -0.035458 0.3853657 1.3305e-01 insignificant 1 1.0000e+00 insignificant 0.4122897 3.2254e-01 insignificant 1 1.00000000 insignificant -0.0420462 3.2472e-01 lowCoverage 1.0000000 lowCoverage chr10 47191197 47192197 99759 CTGLF11P ENSG00000204150 0.81480 243 11 0.76897 189 11 0.67898 123 8 0.82971 214 11 0.68984 99 7 0.79884 305 11 0.63611 116 7 0.83997 239 11 0.80423 133 11 0.89898 124 8 0.81521 274 11 0.75310 57 4 0.90195 223 11 0.88519 92 7 0.83781 143 11 0.81006 49 4 0.82707 34 1 0.82543 332 11 0.76168 189 11 0.83307 198 11 0.74355 70 7 0.88325 127 11 0.84947 152 11 0.72220 96 8 0.85158 106 11 0.81743 269 11 0.82422 129 6 0.78322 49 4 0.81739 165 11 0.83827 264 11 0.81269 175 11 0.81730 303 11 0.76168 179 11 0.76648 112 7 0.78984 167 8 0.81732 32 2 0.80759 125 11 0.80739 180 11 0.84336 168 7 0.84841 248 11 0.85767 189 11 0.86556 134 7 0.87964 204 11 0.81226 0.72825 0.64501 0.82073 0.72079 0.75611 0.65633 0.79000 0.76182 0.86473 0.73951 0.77021 0.88694 0.85371 0.85000 0.75525 0.79464 0.79402 0.72307 0.80541 0.72020 0.80368 0.79611 0.76347 0.86818 0.78548 0.78654 0.81226 0.81222 0.81459 0.79113 0.76787 0.68946 0.68137 0.76451 0.83564 0.79610 0.82828 0.83543 0.84060 0.83832 0.86797 0.85898 4 0.78525 0.80557 -0.01719061 11 0.84309 0.85085 -7.7508e-03 0.961809 0.42344886 insignificant 1 1.00000 insignificant 0.957544 0.606005 insignificant 1 1 insignificant -0.0128309 0.533379 insignificant 1 insignificant 0.78512 0.75189 0.0212784 11 0.83102 0.81641 0.0146181 1.2060e-01 0.9072945 insignificant 1.0000e+00 1 insignificant 6.9110e-01 0.9011417 insignificant 1.0000e+00 1 insignificant 0.0088344 6.3315e-01 insignificant 1.0000e+00 insignificant 0.78512 0.83227 -0.0686302 8 0.83102 0.87600 -0.0449726 0.999985 0.0015098 weaklyHypometh 1 0.50327 insignificant 1.00000 3.4124e-03 weaklyHypometh 1 0.801491 insignificant -0.0583788 0.00215604 weaklyHypometh 0.32020 insignificant 0.80494 0.75094 0.035652 11 0.81513 0.75809 0.057039 2.2080e-01 0.998103 insignificant 1.0000e+00 1 insignificant 5.3274e-01 0.999403 insignificant 1.0000e+00 1 insignificant 0.0216653 1.9834e-01 insignificant 1.0000e+00 insignificant 0.80494 0.83245 -0.04722312 8 0.81513 0.88485 -0.0697237 0.9998675 0.0746597 insignificant 1.00000 1 insignificant 0.999937 0.0412841 weaklyHypometh 1 1 insignificant -0.0455479 0.0070931 weaklyHypometh 0.97881 insignificant 0.75094 0.83245 -0.087696 8 0.75809 0.88485 -0.126763 0.9999990 3.4494e-03 weaklyHypometh 1 1.0546e-01 insignificant 0.9999968 2.8697e-02 weaklyHypometh 1 0.92572055 insignificant -0.0672132 3.0716e-04 weaklyHypometh 0.0438798 weaklyHypometh chr10 47848601 47849601 99771 BMS1P6 ENSG00000198035 0.72513 278 8 0.63198 112 8 0.69001 112 8 0.79048 187 8 0.63594 68 8 0.78259 261 8 0.56168 111 8 0.74772 160 8 0.64666 87 8 0.72067 93 8 0.73496 259 8 0.63646 53 5 0.71725 178 8 0.82687 52 3 0.68997 102 8 0.74558 51 4 0.62461 44 3 0.78808 315 8 0.65533 144 8 0.75951 227 8 0.64135 84 5 0.69163 88 5 0.55946 169 8 0.57674 110 8 0.69457 93 7 0.72984 164 8 0.63722 121 8 0.70401 75 4 0.74870 134 8 0.72389 182 8 0.61621 191 8 0.79733 268 8 0.65379 183 8 0.69235 123 8 0.73582 151 7 0.74206 31 2 0.65598 190 8 0.79655 172 8 0.68509 201 8 0.73646 193 8 0.79835 187 8 0.68119 113 8 0.77016 224 8 0.74056 0.67135 0.69215 0.83473 0.69958 0.78397 0.58521 0.79430 0.64706 0.76670 0.82623 0.61704 0.75132 0.75793 0.72941 0.77825 0.62965 0.82845 0.69001 0.75976 0.65411 0.70951 0.65182 0.65562 0.68587 0.69740 0.63147 0.72993 0.79369 0.72758 0.73850 0.77779 0.68548 0.70345 0.76423 0.68292 0.64523 0.80920 0.74202 0.76536 0.82131 0.71046 0.79470 4 0.75812 0.69089 0.04603676 8 0.70582 0.62413 8.1685e-02 0.098699 0.98609257 insignificant 1 1.00000 insignificant 0.375426 0.919707 insignificant 1 1 insignificant 0.0288280 0.275898 insignificant 1 insignificant 0.75813 0.66824 0.0654052 8 0.75155 0.71092 0.0406363 1.1909e-02 0.7252297 weaklyHypermeth 2.5888e-01 1 insignificant 1.5795e-01 0.1799431 insignificant 1.0000e+00 1 insignificant -0.0071834 7.9938e-01 insignificant 1.0000e+00 insignificant 0.75830 0.75817 -0.0215114 8 0.75155 0.76328 -0.0117313 0.736683 0.1045487 insignificant 1 1.00000 insignificant 0.80302 2.8325e-02 weaklyHypometh 1 1.000000 insignificant -0.0286758 0.33194219 insignificant 1.00000 insignificant 0.69093 0.66824 0.016732 8 0.65171 0.71092 -0.059201 1.2393e-01 0.154068 insignificant 1.0000e+00 1 insignificant 2.5978e-01 0.091614 insignificant 1.0000e+00 1 insignificant -0.0360115 2.6268e-01 insignificant 1.0000e+00 insignificant 0.69217 0.75817 -0.07134086 8 0.71838 0.76328 -0.0449022 0.7845771 0.0062101 weaklyHypometh 1.00000 1 insignificant 0.821262 0.0418948 weaklyHypometh 1 1 insignificant -0.0575038 0.0913664 insignificant 1.00000 insignificant 0.66784 0.75791 -0.084930 8 0.67478 0.73369 -0.058914 0.7703599 2.5084e-04 weaklyHypometh 1 1.2542e-02 weaklyHypometh 0.6999646 3.0165e-03 weaklyHypometh 1 0.17743967 insignificant -0.0214923 5.2392e-01 insignificant 1.0000000 insignificant chr10 48542637 48543637 99786 ENSG00000218280 0.87321 90 5 0.81286 71 4 0.77857 48 5 0.93471 82 5 0.92000 23 1 0.83035 107 5 0.85714 28 1 0.85417 33 3 0.96090 35 2 0.88476 44 5 0.83628 56 5 0.90000 22 2 0.91310 42 5 0.93333 15 1 0.83286 71 5 0.73214 11 1 0.94630 65 2 0.94011 75 5 0.92533 44 4 0.84462 52 5 0.91000 22 2 0.86667 52 5 0.88179 61 5 0.85556 44 4 0.84048 34 4 0.75394 50 4 0.83036 77 5 0.84559 22 1 0.76667 35 1 0.97500 51 5 0.84355 47 1 0.94423 89 5 0.76667 37 1 0.82128 69 5 0.75000 31 2 0.90000 31 4 0.79333 32 4 0.75287 69 5 0.84441 70 5 0.89713 92 5 0.88409 74 5 0.87881 73 5 0.92250 92 5 0.91518 0.85348 0.84968 0.94852 0.93182 0.84265 0.81981 0.91193 0.95437 0.91223 0.84080 0.76136 0.96280 NA 0.91234 0.76319 0.97033 0.95154 0.95000 0.93794 0.96932 0.94949 0.90857 0.95076 0.88799 0.89752 0.87456 0.86753 0.86932 0.91477 0.92687 0.98099 0.90530 0.80726 0.90563 0.96591 0.91439 0.85556 0.91789 0.89555 0.95222 0.87549 0.97358 1 0.88955 0.89384 -0.00536396 5 0.87700 0.87698 1.2134e-05 0.726023 0.29926587 insignificant 1 1.00000 insignificant 0.697219 0.345550 insignificant 1 1 insignificant 0.0160508 0.491999 lowCoverage 1 lowCoverage 0.88955 0.86245 0.0290497 5 0.87700 0.82098 0.0560127 1.2427e-02 0.6096102 weaklyHypermeth 2.6441e-01 1 insignificant 1.0951e-02 0.3044472 weaklyHypermeth 3.2208e-01 1 insignificant 0.0781777 1.8263e-02 lowCoverage 7.6096e-01 lowCoverage 0.88955 0.90274 -0.0208133 5 0.87700 0.89242 -0.0154223 0.768584 0.1839018 insignificant 1 1.00000 insignificant 0.53174 2.7908e-01 insignificant 1 1.000000 insignificant -0.0098517 0.60570878 lowCoverage 1.00000 lowCoverage 0.89384 0.86245 0.037076 5 0.87698 0.82098 0.056001 9.5618e-03 0.855855 weaklyHypermeth 2.2766e-01 1 insignificant 4.7014e-02 0.540503 weaklyHypermeth 1.0000e+00 1 insignificant 0.0621269 6.0182e-02 lowCoverage 1.0000e+00 lowCoverage 0.89384 0.90274 -0.01562487 5 0.87698 0.89242 -0.0154344 0.4926078 0.3769984 insignificant 1.00000 1 insignificant 0.369294 0.3723066 insignificant 1 1 insignificant -0.0259025 0.2665803 lowCoverage 1.00000 lowCoverage 0.86245 0.90274 -0.051283 5 0.82098 0.89242 -0.071435 0.9890798 1.8482e-02 weaklyHypometh 1 4.2981e-01 insignificant 0.9707692 6.5089e-02 insignificant 1 1.00000000 insignificant -0.0880294 1.1443e-02 lowCoverage 0.5449254 lowCoverage chr10 48660517 48661517 99794 ENSG00000218217 0.69261 102 5 0.55409 121 5 0.37428 102 5 0.57817 82 5 0.59048 35 5 0.72066 190 5 0.49485 69 5 0.61786 125 5 0.39870 81 5 0.53489 56 5 0.80127 163 5 0.23030 38 3 0.65787 93 5 0.54495 48 5 0.70806 71 5 0.36571 19 3 0.46667 13 0 0.51619 147 5 0.59537 84 5 0.48529 147 5 0.48016 29 3 0.43247 53 5 0.69931 66 5 0.57651 60 5 0.47810 43 5 0.75590 145 5 0.59581 129 5 0.65177 41 5 0.73457 78 5 0.74157 96 5 0.81488 130 5 0.79470 246 5 0.65404 121 5 0.47857 76 5 0.69880 102 5 0.35000 11 0 0.55250 63 5 0.56499 150 5 0.64107 149 5 0.45429 99 5 0.48101 113 5 0.46896 79 5 0.63110 122 5 0.61746 0.67567 0.35600 0.56832 0.57260 0.66961 0.47499 0.65425 0.37722 0.51198 0.80155 0.26020 0.65186 0.53890 0.57315 0.36582 0.41718 0.60745 0.60110 0.67520 0.46918 0.41447 0.76775 0.56940 0.45346 0.75008 0.49864 0.63737 0.72472 0.73663 0.81325 0.75073 0.57457 0.57055 0.77277 0.30368 0.54570 0.54046 0.62907 0.41452 0.56426 0.52231 0.60907 5 0.59574 0.69444 -0.09260470 5 0.56902 0.70904 -1.4002e-01 0.999900 0.00087506 weaklyHypometh 1 0.23083 insignificant 0.992491 0.013917 weaklyHypometh 1 1 insignificant -0.0998990 0.052731 lowCoverage 1 lowCoverage 0.59574 0.61950 -0.0095516 5 0.56902 0.63048 -0.0614547 4.8223e-01 0.1956762 insignificant 1.0000e+00 1 insignificant 4.5953e-01 0.4469328 insignificant 1.0000e+00 1 insignificant -0.0034016 9.5582e-01 lowCoverage 1.0000e+00 lowCoverage 0.59574 0.53737 0.0341539 5 0.56902 0.49575 0.0732685 0.208631 0.4300691 insignificant 1 1.00000 insignificant 0.27300 5.9390e-01 insignificant 1 1.000000 insignificant 0.0111292 0.83423013 lowCoverage 1.00000 lowCoverage 0.69444 0.61950 0.078670 5 0.70904 0.63048 0.078565 3.4718e-03 0.979218 weaklyHypermeth 9.1364e-02 1 weaklyHypermeth 8.7344e-02 0.981188 insignificant 1.0000e+00 1 insignificant 0.0964974 1.5906e-01 lowCoverage 1.0000e+00 lowCoverage 0.69444 0.53737 0.12444527 5 0.70904 0.49575 0.2132886 0.0040411 0.8760163 weaklyHypermeth 0.29141 1 insignificant 0.070701 0.7868094 insignificant 1 1 insignificant 0.1110282 0.0744315 lowCoverage 1.00000 lowCoverage 0.61950 0.53737 0.037721 5 0.63048 0.49575 0.134723 0.3706830 2.9171e-01 insignificant 1 1.0000e+00 insignificant 0.6394334 5.5428e-01 insignificant 1 1.00000000 insignificant 0.0145307 8.3008e-01 lowCoverage 1.0000000 lowCoverage chr10 48895848 48896848 99797 FAM25C ENSG00000188279 0.75881 149 6 0.55662 99 6 0.63317 70 6 0.78642 183 6 0.63049 73 6 0.73096 256 6 0.65019 62 6 0.81403 109 6 0.73940 95 6 0.86548 77 6 0.80840 179 6 0.72123 36 3 0.86484 115 6 0.72619 50 3 0.73285 67 6 0.57778 16 1 0.53968 22 2 0.73771 148 6 0.74746 129 6 0.75005 125 6 0.84722 40 3 0.82133 72 6 0.68234 96 6 0.73286 74 6 0.82460 61 6 0.84572 168 6 0.87638 85 6 0.73750 32 2 0.74801 125 4 0.74638 140 6 0.76553 137 6 0.78091 253 6 0.67968 113 6 0.68349 78 6 0.71949 113 6 1.00000 16 2 0.70454 84 6 0.81396 155 6 0.74550 147 6 0.75437 174 6 0.79109 126 6 0.80955 132 6 0.80721 132 6 0.82685 0.70523 0.65003 0.83756 0.75820 0.80887 0.55716 0.83516 0.78900 0.86775 0.84167 0.78037 0.89457 0.80395 0.80232 0.69303 0.57842 0.81952 0.82571 0.80639 0.88465 0.84103 0.78162 0.84414 0.87494 0.88414 0.82453 0.89774 0.73064 0.81668 0.81456 0.83030 0.73166 0.79797 0.76443 0.89765 0.72025 0.85982 0.77013 0.88516 0.84742 0.84792 0.83648 3 0.79320 0.80125 -0.01782514 6 0.80206 0.75418 4.7876e-02 0.608634 0.37830354 insignificant 1 1.00000 insignificant 0.932431 0.027532 weaklyHypometh 1 1 insignificant -0.0654776 0.021189 weaklyHypometh 1 insignificant 0.79309 0.76386 0.0169873 6 0.78121 0.76831 0.0128999 2.1644e-01 0.6255829 insignificant 1.0000e+00 1 insignificant 6.4361e-01 0.2166778 insignificant 1.0000e+00 1 insignificant -0.0482690 4.0935e-01 insignificant 1.0000e+00 insignificant 0.79320 0.81013 -0.0276838 6 0.80206 0.80375 -0.0016918 0.880790 0.3748297 insignificant 1 1.00000 insignificant 0.98194 8.9754e-02 insignificant 1 1.000000 insignificant -0.0629563 0.01939422 weaklyHypometh 1.00000 insignificant 0.80031 0.76386 0.034226 6 0.70435 0.76831 -0.063962 1.8093e-01 0.729454 insignificant 1.0000e+00 1 insignificant 2.2554e-01 0.878762 insignificant 1.0000e+00 1 insignificant 0.0172086 7.5829e-01 insignificant 1.0000e+00 insignificant 0.80125 0.81013 -0.00507475 6 0.75418 0.80375 -0.0495682 0.7226840 0.4100134 insignificant 1.00000 1 insignificant 0.637149 0.8150240 insignificant 1 1 insignificant 0.0025213 0.9084012 insignificant 1.00000 insignificant 0.76386 0.80993 -0.040432 6 0.76831 0.79529 -0.026980 0.9593049 2.3363e-01 insignificant 1 1.0000e+00 insignificant 0.9696652 4.0896e-01 insignificant 1 1.00000000 insignificant -0.0146874 7.8947e-01 insignificant 1.0000000 insignificant chr10 50106056 50107056 99837 C10orf128 ENSG00000204161 0.86086 324 5 0.81952 165 5 0.83744 106 5 0.90683 322 5 1.00000 26 3 0.92575 320 5 0.81429 37 5 0.88460 179 5 0.86293 76 5 0.93414 87 5 0.88547 184 5 0.85333 37 5 0.88512 167 5 NA 0 0 0.87126 94 5 1.00000 6 0 0.71667 24 2 0.85722 406 5 0.82502 83 5 0.91042 216 5 0.97778 42 5 0.88495 125 5 0.92028 176 5 0.83444 74 5 0.85727 82 5 0.92559 192 5 0.90305 117 5 1.00000 44 5 0.81320 141 5 0.89520 305 5 0.90300 169 5 0.94551 258 5 0.69790 137 5 0.76913 105 5 0.70339 118 2 0.68158 65 5 0.74631 75 5 0.75041 213 5 0.90444 294 5 0.91812 373 5 0.84102 373 5 0.85461 377 5 0.88996 400 5 0.86179 0.82612 0.84242 0.90617 1.00000 0.92759 0.82464 0.89000 0.86124 0.93354 0.88579 0.85921 0.88897 NA 0.87453 0.94712 0.71856 0.85935 0.83268 0.91213 0.97937 0.88897 0.91993 0.83779 0.85844 0.92787 0.90360 1.00000 0.81921 0.89895 0.90683 0.94569 0.69569 0.76488 0.75050 0.69278 0.73856 0.76006 0.90722 0.92034 0.84500 0.85592 0.89109 5 0.88213 0.91246 -0.02369062 5 0.88444 0.90841 -2.3969e-02 0.997462 0.04314348 weaklyHypometh 1 1.00000 insignificant 0.991618 0.126607 insignificant 1 1 insignificant -0.0286613 0.198779 lowCoverage 1 lowCoverage 0.88213 0.75596 0.1261889 5 0.88444 0.76012 0.1243165 2.8467e-07 0.9993647 weaklyHypermeth 1.2640e-05 1 weaklyHypermeth 9.2200e-04 0.9999270 weaklyHypermeth 4.4166e-02 1 weaklyHypermeth 0.1515747 1.4432e-06 lowCoverage 1.8040e-04 lowCoverage 0.88213 0.86681 0.0038073 5 0.88444 0.88115 0.0032830 0.618338 0.6736783 insignificant 1 1.00000 insignificant 0.65067 6.2961e-01 insignificant 1 1.000000 insignificant -0.0052681 0.80538000 lowCoverage 1.00000 lowCoverage 0.91246 0.75596 0.150904 5 0.90841 0.76012 0.148285 1.3249e-06 0.999944 weaklyHypermeth 6.3090e-05 1 weaklyHypermeth 6.9487e-05 0.999998 weaklyHypermeth 5.3451e-03 1 weaklyHypermeth 0.1802360 4.9676e-07 lowCoverage 8.2794e-05 lowCoverage 0.91246 0.86681 0.02545860 5 0.90841 0.88115 0.0272515 0.1067953 0.9746339 insignificant 1.00000 1 insignificant 0.081860 0.9959730 insignificant 1 1 insignificant 0.0233932 0.2977606 insignificant 1.00000 insignificant 0.75596 0.86681 -0.122441 5 0.76012 0.88115 -0.121034 0.9980668 5.3376e-03 weaklyHypometh 1 1.4426e-01 insignificant 0.9994819 1.1189e-02 weaklyHypometh 1 0.48243875 insignificant -0.1568428 3.4772e-05 lowCoverage 0.0078980 lowCoverage chr10 51581045 51582045 99913 ENSG00000217832 0.91508 194 5 0.79716 196 5 0.91143 76 5 0.94460 133 5 1.00000 42 5 0.92504 145 5 0.87491 69 5 0.89553 123 5 0.93972 103 5 0.87626 68 5 0.95789 140 5 0.86496 38 3 0.96174 97 5 1.00000 13 2 0.89764 92 5 1.00000 3 0 0.90000 16 1 0.94262 169 5 0.97033 64 5 0.91660 180 5 0.97500 33 3 0.96760 77 5 0.90398 97 5 1.00000 38 5 0.92500 53 5 0.97279 165 5 0.90480 70 5 0.96667 27 3 0.91261 131 5 0.97546 231 5 0.93927 231 5 0.98004 203 5 0.92391 125 5 0.83640 98 5 0.97059 75 5 0.96000 16 1 0.97091 55 3 0.92295 233 5 0.94738 199 5 0.96888 221 5 0.92974 167 5 0.97644 141 5 0.95915 183 5 0.91668 0.79921 0.90405 0.94587 1.00000 0.92311 0.88663 0.89849 0.93514 0.86924 0.94837 0.84653 0.95780 0.95235 0.88996 NA 0.89662 0.94553 0.96747 0.91546 0.97259 0.97058 0.91219 1.00000 0.91776 0.97304 0.90516 0.95322 0.91223 0.97358 0.94391 0.97085 0.91295 0.83510 0.96775 0.95614 0.96531 0.91893 0.93695 0.96983 0.92024 0.97312 0.95270 1 0.91280 0.95270 -0.04033327 5 0.91107 0.95133 -4.0263e-02 0.999910 0.00055034 weaklyHypometh 1 0.23083 insignificant 0.997211 0.023151 weaklyHypometh 1 1 insignificant -0.0273588 0.076321 lowCoverage 1 lowCoverage 0.91280 0.92027 -0.0140632 5 0.91107 0.91960 -0.0085273 2.2024e-01 0.1035501 insignificant 1.0000e+00 1 insignificant 3.1074e-01 0.0443784 weaklyHypometh 1.0000e+00 1 insignificant -0.0062165 8.0031e-01 lowCoverage 1.0000e+00 lowCoverage 0.91280 0.95609 -0.0409188 5 0.91107 0.95388 -0.0428106 0.997115 0.0090536 weaklyHypometh 1 1.00000 insignificant 0.96108 3.6056e-02 weaklyHypometh 1 1.000000 insignificant -0.0317417 0.03616957 lowCoverage 1.00000 lowCoverage 0.95270 0.92027 0.028527 5 0.95133 0.91960 0.031736 2.8873e-03 0.823759 weaklyHypermeth 7.8035e-02 1 weaklyHypermeth 6.5609e-02 0.510217 insignificant 1.0000e+00 1 insignificant 0.0211424 3.8687e-01 lowCoverage 1.0000e+00 lowCoverage 0.95270 0.95609 -0.00021484 5 0.95133 0.95388 -0.0025478 0.3166935 0.0891576 insignificant 1.00000 1 insignificant 0.345335 0.4083537 insignificant 1 1 insignificant -0.0043829 0.7336279 lowCoverage 1.00000 lowCoverage 0.92027 0.95609 -0.030794 5 0.91960 0.95388 -0.034283 0.9295506 2.3224e-02 weaklyHypometh 1 5.2782e-01 insignificant 0.6272281 1.8621e-01 insignificant 1 1.00000000 insignificant -0.0255252 2.9554e-01 lowCoverage 1.0000000 lowCoverage chr10 52395250 52396250 99925 ENSG00000217701 0.77674 431 13 0.65921 198 14 0.73504 139 13 0.75919 312 13 0.59332 80 8 0.68480 473 13 0.70578 155 13 0.69851 181 12 0.69774 151 13 0.77830 119 11 0.75690 370 14 0.71897 97 12 0.75564 199 13 0.69866 51 7 0.74294 197 13 0.50917 92 13 0.85263 75 7 0.72989 345 13 0.79144 214 13 0.71834 437 13 0.80782 119 10 0.69927 93 10 0.75721 282 13 0.76848 93 9 0.74093 76 10 0.69499 252 13 0.81366 117 11 0.79945 68 5 0.76300 211 11 0.73069 275 13 0.69911 186 10 0.77194 504 13 0.72768 192 12 0.70438 181 13 0.63776 316 14 0.69566 105 8 0.72000 141 10 0.61892 294 13 0.76704 340 13 0.75132 391 14 0.79229 345 13 0.69964 302 10 0.78644 412 13 0.80190 0.65724 0.72098 0.75333 0.76939 0.78338 0.73031 0.76995 0.75359 0.83852 0.77724 0.72080 0.79191 0.81476 0.77121 0.67692 0.80851 0.81500 0.81379 0.77816 0.82151 0.70001 0.78108 0.75762 0.74328 0.76251 0.81555 0.78547 0.80219 0.76210 0.72942 0.77711 0.70107 0.71812 0.69285 0.78331 0.70370 0.68007 0.79523 0.81046 0.83991 0.79290 0.81294 6 0.76019 0.76923 -0.00759770 13 0.62004 0.71840 -9.8354e-02 0.886637 0.34160862 insignificant 1 1.00000 insignificant 0.921213 0.097347 insignificant 1 1 insignificant -0.0357187 0.089099 insignificant 1 insignificant 0.76121 0.69731 0.0651250 13 0.73339 0.68881 0.0445847 2.9729e-05 0.9996448 weaklyHypermeth 1.1011e-03 1 weaklyHypermeth 1.0410e-02 0.9885042 weaklyHypermeth 3.1545e-01 1 insignificant 0.0340951 1.8749e-01 insignificant 1.0000e+00 insignificant 0.76050 0.80615 -0.0377418 13 0.61116 0.74256 -0.1314040 0.999844 0.0824956 insignificant 1 1.00000 insignificant 0.99997 4.2379e-02 weaklyHypometh 1 1.000000 insignificant -0.0411857 0.10043070 insignificant 1.00000 insignificant 0.76971 0.69731 0.071410 13 0.73564 0.68881 0.046835 3.0516e-05 0.999105 weaklyHypermeth 1.1737e-03 1 weaklyHypermeth 3.9593e-03 0.995377 weaklyHypermeth 1.4664e-01 1 insignificant 0.0698138 1.0621e-02 weaklyHypermeth 5.3107e-01 insignificant 0.77038 0.80615 -0.02913073 13 0.76118 0.74256 0.0186193 0.9961421 0.2266060 insignificant 1.00000 1 insignificant 0.924428 0.4535896 insignificant 1 1 insignificant -0.0054671 0.7964635 insignificant 1.00000 insignificant 0.69731 0.80638 -0.101305 13 0.68881 0.75774 -0.068936 0.9995592 9.4921e-08 weaklyHypometh 1 1.8984e-05 weaklyHypometh 0.9959715 7.6706e-06 weaklyHypometh 1 0.00255685 weaklyHypometh -0.0752809 1.4007e-02 weaklyHypometh 0.6090108 insignificant chr10 53839965 53840965 99979 ENSG00000216209 0.95911 111 6 0.80000 43 5 0.55000 28 2 0.96420 84 6 0.42000 13 1 0.88798 107 7 0.67593 19 1 0.92560 54 5 0.73810 20 2 0.70708 58 7 0.65594 39 2 0.36806 21 2 0.67469 73 7 1.00000 15 1 0.71825 32 1 0.00000 7 0 0.26667 11 1 0.90516 111 7 0.82753 38 2 0.86971 96 7 0.48333 14 1 0.89028 60 7 0.84167 38 2 0.70000 17 2 0.91852 36 3 0.94444 114 8 0.54872 41 3 0.23333 21 3 0.65089 57 7 0.86944 230 8 0.71304 127 8 0.89808 124 8 0.39571 46 2 0.78395 22 1 0.38889 25 2 0.80556 22 0 0.30000 42 5 0.71739 105 7 0.83117 68 7 0.91500 116 8 0.86000 109 6 0.92308 50 1 0.94360 144 7 0.93323 0.75676 0.79189 1.00000 0.56070 0.85943 0.54730 0.79730 0.79151 0.65647 0.81641 0.49099 0.49485 0.79613 0.75901 0.00000 0.66667 0.81939 0.79505 0.88610 0.82162 0.85766 0.88063 0.93243 1.00000 0.90541 0.76798 0.68649 0.57973 0.79662 0.84102 0.89282 0.73243 0.59910 0.75048 0.72297 0.59820 0.81046 0.78721 0.90676 1.00000 0.95283 0.91667 0 0.83027 0.86917 -0.04345941 2 0.80882 0.76679 4.2037e-02 0.770192 0.32519788 lowCoverage 1 1.00000 lowCoverage 0.287037 0.115349 lowCoverage 1 1 lowCoverage -0.0286129 0.740846 lowCoverage 1 lowCoverage 0.83112 0.70229 0.1094958 2 0.85428 0.60768 0.2465930 1.1350e-04 0.9985771 lowCoverage 4.0535e-03 1 lowCoverage 2.8172e-03 0.9852409 lowCoverage 1.0835e-01 1 lowCoverage 0.1304498 2.6414e-01 lowCoverage 1.0000e+00 lowCoverage 0.83094 0.92813 -0.0686489 1 0.83971 0.90906 -0.0693545 0.993498 0.0570262 lowCoverage 1 1.00000 lowCoverage 0.99418 1.7831e-02 lowCoverage 1 1.000000 lowCoverage -0.1988698 0.00410732 lowCoverage 0.42572 lowCoverage 0.87115 0.70498 0.151135 3 0.84346 0.66845 0.175011 1.5644e-04 0.999147 lowCoverage 5.2148e-03 1 lowCoverage 2.2681e-03 0.996701 lowCoverage 9.4506e-02 1 lowCoverage 0.1590626 1.8685e-01 lowCoverage 1.0000e+00 lowCoverage 0.87115 0.92813 -0.01772086 6 0.84346 0.90906 -0.0655954 0.9153963 0.2481853 insignificant 1.00000 1 insignificant 0.947972 0.1129717 insignificant 1 1 insignificant -0.1702569 0.0225093 weaklyHypometh 1.00000 insignificant 0.70498 0.92813 -0.193061 2 0.66845 0.90906 -0.240607 0.9999748 1.0201e-03 lowCoverage 1 3.7782e-02 lowCoverage 0.9999991 1.1288e-03 lowCoverage 1 0.09407007 lowCoverage -0.3293196 1.5494e-02 lowCoverage 0.6455867 lowCoverage chr10 63412875 63413875 100411 ENSG00000221272 0.911245 112 6 0.92260 179 6 0.95074 67 6 0.83333 24 4 0.983333 40 4 0.869164 99 6 0.847222 40 5 0.945833 89 6 0.951515 46 6 0.93499 51 5 0.946072 210 6 1.000000 26 2 0.986819 195 6 NA 0 0 0.91503 74 6 0.47361 31 4 0.911111 20 2 0.93333 48 6 0.94374 145 6 0.95214 86 6 0.907407 34 4 0.944444 26 2 0.907343 104 6 1.00000 34 4 1.00000 8 0 0.97861 254 6 1.000000 45 4 0.87500 9 0 0.94720 137 6 0.945731 261 6 0.94841 247 6 0.96260 185 6 0.83748 140 6 0.87153 159 6 0.93355 78 4 0.75000 7 0 0.958333 26 2 0.925802 303 6 1.00000 45 6 0.96291 151 6 0.925000 20 2 0.97222 45 5 0.98718 52 6 0.885732 0.924416 0.94652 0.890110 0.972527 0.88468 0.841575 0.939560 0.950849 0.92825 0.930803 1.000000 0.982936 NA 0.914889 0.463828 0.904762 0.95165 0.95263 0.959284 0.898657 0.963370 0.904211 1.000000 1.00000 0.98045 1.00000 0.93177 0.96468 0.942616 0.949361 0.96286 0.81836 0.86708 0.91956 0.78793 0.97253 0.92814 1.00000 0.96137 0.917582 0.95421 0.97887 0 0.929204 0.95610 -0.027511 6 0.93169 0.95722 -0.0255305 0.98580 0.050624 insignificant 1 1 insignificant 0.99702 0.016717 weaklyHypometh 1 1 insignificant -0.0455093 0.12289 lowCoverage 1 lowCoverage 0.929204 0.890603 0.038885 6 0.93169 0.893481 0.038205 5.4304e-02 9.8273e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9564e-02 9.5831e-01 weaklyHypermeth 1.0000e+00 1.000e+00 insignificant 0.02643740 5.2963e-01 lowCoverage 1.0000000 lowCoverage 0.929204 0.96486 -0.036238 6 0.93169 0.96804 -0.0363536 9.9482e-01 1.1163e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9878e-01 0.028822 weaklyHypometh 1.00000000 1 insignificant -0.063577 3.9109e-02 lowCoverage 1.000000 lowCoverage 0.95610 0.890603 0.065398 6 0.95722 0.893481 0.063736 4.9725e-06 9.9999e-01 weaklyHypermeth 3.5518e-04 1.0000e+00 weaklyHypermeth 6.7688e-04 9.9969e-01 weaklyHypermeth 4.5034e-02 1.0000e+00 weaklyHypermeth 0.071947 0.07339425 lowCoverage 1.000000 lowCoverage 0.95610 0.96486 -0.0070086 6 0.95722 0.96804 -0.0108231 9.0135e-01 0.24106437 insignificant 1.0000e+00 1.00000 insignificant 8.5227e-01 0.32195 insignificant 1.00000000 1 insignificant -0.0180680 0.318663 lowCoverage 1 lowCoverage 0.890603 0.96486 -0.074408 6 0.893481 0.96804 -0.074559 9.9999e-01 1.6654e-05 weaklyHypometh 1.0000e+00 2.3792e-03 weaklyHypometh 9.9997e-01 2.8152e-03 weaklyHypometh 1.000000 0.281521 insignificant -0.090015 0.035312 lowCoverage 1.00000 lowCoverage chr10 70029381 70030381 100888 TET1 ENSG00000138336 0.457143 35 5 0.40000 65 5 0.10000 19 0 0.46667 135 5 0.583333 31 5 0.838079 64 5 0.480000 25 5 0.700000 11 0 0.300000 10 0 NA 0 0 0.721513 112 5 NA 0 0 NA 0 0 NA 0 0 0.60000 5 0 0.40000 10 0 NA 0 0 0.60081 50 5 0.45000 17 0 0.51429 35 5 NA 0 0 NA 0 0 0.236111 18 0 0.00000 2 0 0.80000 10 0 0.57167 77 5 0.520000 25 5 0.70000 6 0 0.73333 15 0 0.413611 81 5 0.51389 43 5 0.56250 86 5 0.00000 39 5 0.20000 20 0 0.20000 20 0 NA 0 0 0.033333 30 5 0.054545 55 5 0.28114 67 5 0.33333 75 5 0.349576 145 5 0.88000 22 2 0.31707 172 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.559295 0.51791 0.038724 5 0.46595 0.43466 0.0312887 0.40080 0.939756 insignificant 1 1 insignificant 0.89882 0.742724 insignificant 1 1 insignificant 0.0023441 0.97937 lowCoverage 1 lowCoverage 0.559295 0.073171 0.481147 5 0.46595 0.062233 0.403713 4.9527e-13 1.0000e+00 hypermethylated 7.0753e-11 1.0000e+00 hypermethylated 2.3686e-05 1.0000e+00 hypermethylated 2.9607e-03 1.000e+00 hypermethylated 0.40987948 1.6181e-05 lowCoverage 0.0053937 lowCoverage 0.559295 0.29314 0.266484 5 0.46595 0.40938 0.0565665 2.7983e-05 1.0000e+00 hypermethylated 3.9976e-03 1.00000000 hypermethylated 1.4156e-01 0.955386 insignificant 1.00000000 1 insignificant 0.075232 5.6166e-01 lowCoverage 1.000000 lowCoverage 0.51791 0.073171 0.443227 5 0.43466 0.062233 0.372424 3.5961e-11 1.0000e+00 hypermethylated 5.9935e-09 1.0000e+00 hypermethylated 9.3343e-06 1.0000e+00 hypermethylated 1.8166e-03 1.0000e+00 hypermethylated 0.407535 0.00046302 lowCoverage 0.068465 lowCoverage 0.51791 0.29314 0.2265499 5 0.43466 0.40938 0.0252778 3.1601e-04 0.99999998 hypermethylated 3.5112e-02 1.00000 hypermethylated 2.4518e-02 0.98327 weaklyHypermeth 1.00000000 1 insignificant 0.0728874 0.606536 lowCoverage 1 lowCoverage 0.073171 0.29314 -0.218839 5 0.062233 0.40938 -0.347146 9.9999e-01 7.8757e-04 hypomethylated 1.0000e+00 5.6255e-02 hypomethylated 1.0000e+00 7.0795e-05 hypomethylated 1.000000 0.023598 hypomethylated -0.334648 0.037808 lowCoverage 1.00000 lowCoverage chr10 70061829 70062829 100890 ENSG00000216826 0.902769 438 14 0.81809 399 14 0.88089 197 13 0.89154 401 14 0.845802 265 13 0.918066 435 14 0.844200 221 14 0.807266 316 14 0.890801 135 11 0.84047 273 14 0.901992 553 14 0.788764 163 12 0.799421 320 14 0.80963 151 10 0.81883 325 13 0.70469 82 7 0.713732 929 8 0.77655 391 16 0.85627 313 14 0.95321 422 13 0.917303 125 13 0.878532 176 13 0.830395 198 14 0.71221 165 13 0.93133 143 9 0.95536 471 14 0.913023 210 11 0.71945 114 12 0.87160 390 14 0.850473 521 14 0.82650 442 14 0.93275 496 14 0.80604 432 14 0.94008 191 12 0.75667 246 10 0.88272 66 8 0.759445 180 13 0.885246 399 13 0.92661 344 13 0.89239 370 14 0.913725 336 14 0.90574 307 13 0.92235 356 14 0.901552 0.825805 0.85363 0.905232 0.862476 0.93067 0.867343 0.861189 0.891440 0.91938 0.892913 0.823007 0.921663 0.887296 0.890215 0.841610 0.856400 0.87662 0.87831 0.944417 0.926994 0.933628 0.838666 0.915732 0.91586 0.95013 0.88001 0.86433 0.88913 0.888420 0.910781 0.91464 0.86345 0.91097 0.83047 0.91789 0.84662 0.85712 0.93760 0.91167 0.887576 0.91494 0.91315 8 0.882248 0.91043 -0.022446 14 0.83797 0.84715 -0.0091796 0.98041 0.004034 weaklyHypometh 1 1 insignificant 0.99314 0.012716 weaklyHypometh 1 1 insignificant -0.0234284 0.39849 insignificant 1 insignificant 0.882230 0.856671 0.026064 14 0.82897 0.796092 0.032876 5.3538e-03 6.5197e-01 weaklyHypermeth 1.4872e-01 1.0000e+00 insignificant 5.9368e-01 5.3010e-01 insignificant 1.0000e+00 1.000e+00 insignificant -0.00021754 9.9507e-01 insignificant 1.0000000 insignificant 0.882844 0.91010 -0.028394 14 0.84858 0.92848 -0.0799089 9.9965e-01 3.5077e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9909e-01 0.063663 insignificant 1.00000000 1 insignificant -0.074013 9.4777e-05 weaklyHypometh 0.031592 weaklyHypometh 0.91194 0.856671 0.046454 14 0.87569 0.796092 0.079603 1.4568e-04 9.8188e-01 weaklyHypermeth 5.8272e-03 1.0000e+00 weaklyHypermeth 1.3481e-01 9.7691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.023211 0.55851142 insignificant 1.000000 insignificant 0.91139 0.91010 -0.0093900 14 0.86643 0.92848 -0.0620494 9.0239e-01 0.45714040 insignificant 1.0000e+00 1.00000 insignificant 8.6822e-01 0.72746 insignificant 1.00000000 1 insignificant -0.0505844 0.054025 insignificant 1 insignificant 0.859894 0.91005 -0.056394 14 0.828215 0.92428 -0.096063 9.9872e-01 3.6186e-03 weaklyHypometh 1.0000e+00 1.7598e-01 insignificant 9.9215e-01 3.4207e-01 insignificant 1.000000 1.000000 insignificant -0.073795 0.061830 insignificant 1.00000 insignificant chr10 71326163 71327163 100912 COL13A1 ENSG00000197467 0.855451 228 4 0.57945 119 4 0.68216 89 4 0.56951 255 4 0.735256 66 4 0.730686 240 6 0.629859 91 6 0.764113 126 4 0.706429 80 4 0.82074 113 4 0.775577 165 6 0.832251 31 3 0.621307 144 4 0.77264 55 4 0.64583 104 4 0.82323 52 4 0.625000 8 0 0.69860 496 5 0.70054 163 4 0.56092 179 4 0.753260 51 4 0.539301 116 4 0.760069 124 6 0.63212 70 4 0.67686 290 6 0.71750 167 6 0.702132 70 4 0.62913 45 4 0.74439 130 6 0.749635 205 6 0.67889 180 6 0.80035 195 6 0.15069 172 6 0.11234 192 4 0.15214 56 5 0.88455 255 6 0.225224 86 6 0.608389 237 6 0.37553 306 6 0.58052 226 6 0.462950 272 4 0.72213 321 4 0.50634 226 4 0.763643 0.621531 0.69225 0.583973 0.736465 0.65182 0.584841 0.795015 0.704346 0.71694 0.792115 0.723573 0.556009 0.635342 0.625722 0.723049 0.738353 0.61999 0.66537 0.551985 0.839610 0.498107 0.723184 0.773707 0.67564 0.70772 0.65447 0.72627 0.67862 0.733220 0.690228 0.80533 0.14686 0.11191 0.02101 0.84370 0.25166 0.49302 0.37633 0.54986 0.493453 0.54828 0.47981 4 0.710414 0.71272 -0.033646 4 0.71579 0.54636 0.1694317 0.45923 0.369271 lowCoverage 1 1 lowCoverage 0.61333 0.580993 lowCoverage 1 1 lowCoverage 0.0078431 0.79050 lowCoverage 1 lowCoverage 0.710150 0.388778 0.346323 4 0.69900 0.400413 0.298588 3.5118e-12 9.4783e-01 lowCoverage 4.3898e-10 1.0000e+00 lowCoverage 5.7080e-07 9.9855e-01 lowCoverage 1.1416e-04 1.000e+00 lowCoverage 0.35092535 4.1886e-02 lowCoverage 1.0000000 lowCoverage 0.710197 0.59289 0.139860 4 0.70439 0.50497 0.1994167 5.0612e-08 9.5828e-01 lowCoverage 1.0122e-05 1.00000000 lowCoverage 7.9286e-06 0.974336 lowCoverage 0.00264288 1 lowCoverage 0.176984 3.5347e-02 lowCoverage 1.000000 lowCoverage 0.71359 0.388778 0.336266 6 0.62441 0.400413 0.223999 2.6276e-08 9.9588e-01 hypermethylated 2.6276e-06 1.0000e+00 hypermethylated 2.5808e-05 9.9909e-01 hypermethylated 3.6868e-03 1.0000e+00 hypermethylated 0.343082 0.04509855 weaklyHypermeth 1.000000 insignificant 0.71402 0.59289 0.2100543 4 0.72848 0.50497 0.2235078 6.6611e-08 0.96193815 lowCoverage 1.3322e-05 1.00000 lowCoverage 2.6757e-05 0.99983 lowCoverage 0.00891908 1 lowCoverage 0.1691408 0.041089 lowCoverage 1 lowCoverage 0.389168 0.59289 -0.217934 4 0.467149 0.50497 -0.037825 1.4977e-01 1.3106e-02 lowCoverage 1.0000e+00 5.0407e-01 lowCoverage 6.8142e-01 4.2026e-03 lowCoverage 1.000000 0.330743 lowCoverage -0.173941 0.261152 lowCoverage 1.00000 lowCoverage chr10 72500007 72501007 100950 PCBD1 ENSG00000166228 0.936306 77 5 0.86387 172 5 0.76355 73 5 0.94799 164 5 0.638889 26 2 0.941818 146 5 0.923776 48 3 0.916522 103 5 0.813889 66 5 0.91978 62 4 0.883632 156 5 0.911111 32 2 0.946206 110 5 0.81781 32 2 0.78920 79 5 0.93333 11 1 0.950000 12 0 0.70840 147 5 0.92292 157 5 0.91975 82 5 0.754464 73 5 0.932874 112 5 0.926529 93 5 0.94286 52 5 0.82639 41 2 0.96240 184 5 0.932246 81 5 0.70381 44 4 0.87922 125 5 0.974687 155 5 0.92101 135 5 0.92459 85 5 0.74476 80 5 0.76224 70 5 0.81687 181 6 0.70732 46 1 0.692547 51 2 0.872301 156 5 0.92063 51 5 0.95778 122 5 0.833636 75 5 0.92458 72 5 0.78088 100 5 0.900901 0.701312 0.68154 0.909841 0.756415 0.92198 0.863612 0.937538 0.799883 0.86643 0.888024 0.916275 0.937894 0.829317 0.823402 0.936620 0.877805 0.81042 0.90730 0.891452 0.934859 0.923803 0.926362 0.985915 0.97477 0.95019 0.89539 0.74581 0.82127 0.943132 0.930495 0.91050 0.60352 0.56925 0.86162 0.52920 0.65997 0.78825 0.89470 0.93396 0.773351 0.86749 0.94943 2 0.871795 0.92034 -0.047961 5 0.82936 0.65950 0.1698602 0.90399 0.036096 weaklyHypometh 1 1 insignificant 0.81735 0.104018 insignificant 1 1 insignificant -0.0176517 0.58119 lowCoverage 1 lowCoverage 0.871795 0.785959 0.101204 5 0.82936 0.852694 -0.023330 2.9239e-03 6.4669e-01 weaklyHypermeth 8.5996e-02 1.0000e+00 weaklyHypermeth 2.2491e-02 8.8970e-01 weaklyHypermeth 8.0710e-01 1.000e+00 insignificant 0.10643338 1.0175e-02 lowCoverage 0.7827080 lowCoverage 0.871649 0.90000 -0.025670 5 0.80092 0.76543 0.0354940 8.4312e-01 1.8535e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.8184e-01 0.708971 insignificant 1.00000000 1 insignificant -0.011063 7.8131e-01 lowCoverage 1.000000 lowCoverage 0.92034 0.785959 0.146661 5 0.65950 0.852694 -0.193190 5.0572e-04 9.7930e-01 weaklyHypermeth 1.6314e-02 1.0000e+00 weaklyHypermeth 1.4267e-02 9.5857e-01 weaklyHypermeth 4.9198e-01 1.0000e+00 insignificant 0.124085 0.00558379 lowCoverage 0.483648 lowCoverage 0.92190 0.90000 0.0178705 5 0.76942 0.76543 0.0039905 5.7259e-01 0.77486307 insignificant 1.0000e+00 1.00000 insignificant 5.4882e-01 0.93096 insignificant 1.00000000 1 insignificant 0.0065889 0.876041 lowCoverage 1 lowCoverage 0.775180 0.90000 -0.133615 5 0.828143 0.76543 0.062713 6.8386e-01 6.3304e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8978e-01 4.3240e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.117496 0.024863 lowCoverage 1.00000 lowCoverage chr10 72567731 72568731 100954 PCBD1 ENSG00000166228 0.924557 166 9 0.80149 217 9 0.69934 192 10 0.94896 109 8 0.885000 60 3 0.904379 230 9 0.907222 80 8 0.777778 98 8 0.886316 92 6 0.96360 76 8 0.883836 206 10 0.858571 33 4 0.867312 149 8 0.57576 33 3 0.84003 98 8 0.76964 27 2 0.865556 36 4 0.75807 77 8 0.88892 106 6 0.91008 210 9 0.901667 78 8 0.832308 62 5 0.929773 180 9 0.86551 99 8 0.88667 54 5 0.92194 215 9 0.770851 135 8 0.88791 52 5 0.87008 126 8 0.915758 315 10 0.89754 271 9 0.92186 339 9 0.55956 195 9 0.58444 184 8 0.27709 224 9 0.61524 51 5 0.433190 159 8 0.690489 269 9 0.75635 251 9 0.68532 214 8 0.838558 128 9 0.82217 127 9 0.61185 190 9 0.922453 0.813044 0.64053 0.936329 0.877194 0.88122 0.924379 0.785165 0.861335 0.96218 0.884497 0.832599 0.903651 0.823523 0.850747 0.802052 0.869684 0.88616 0.91502 0.912526 0.888652 0.853360 0.919462 0.951544 0.89601 0.93722 0.82008 0.90422 0.86869 0.916611 0.892838 0.91661 0.59233 0.58506 0.12384 0.58392 0.40221 0.72367 0.69952 0.74303 0.870881 0.82230 0.63608 4 0.856209 0.88837 -0.036314 8 0.86708 0.89613 -0.0290494 0.99548 0.046545 weaklyHypometh 1 1 insignificant 0.94108 0.264120 insignificant 1 1 insignificant -0.0376690 0.13557 insignificant 1 insignificant 0.856209 0.438078 0.365031 8 0.86708 0.549991 0.317090 3.5139e-28 1.0000e+00 hypermethylated 1.7569e-25 1.0000e+00 hypermethylated 6.6076e-13 1.0000e+00 hypermethylated 6.6076e-10 1.000e+00 hypermethylated 0.31915151 2.2474e-03 weaklyHypermeth 0.2809241 insignificant 0.856209 0.71538 0.140456 8 0.86708 0.70410 0.1629843 4.2272e-11 9.9951e-01 weaklyHypermeth 1.4091e-08 1.00000000 weaklyHypermeth 9.9908e-07 0.992670 weaklyHypermeth 0.00049954 1 weaklyHypermeth 0.102970 7.1840e-02 insignificant 1.000000 insignificant 0.88837 0.438078 0.427998 9 0.89613 0.549991 0.346139 9.5884e-28 1.0000e+00 hypermethylated 4.7942e-25 1.0000e+00 hypermethylated 1.1788e-12 1.0000e+00 hypermethylated 1.1788e-09 1.0000e+00 hypermethylated 0.356821 0.00164383 weaklyHypermeth 0.205478 insignificant 0.88837 0.71538 0.1780644 9 0.89613 0.70410 0.1920337 7.6098e-17 0.99999952 weaklyHypermeth 7.6098e-14 1.00000 weaklyHypermeth 2.5756e-07 0.99883 weaklyHypermeth 0.00025756 1 weaklyHypermeth 0.1406394 0.026621 weaklyHypermeth 1 insignificant 0.438078 0.71538 -0.255406 9 0.549991 0.70410 -0.154106 9.3911e-01 1.1455e-07 hypomethylated 1.0000e+00 3.8185e-05 hypomethylated 9.5905e-01 2.8840e-05 hypomethylated 1.000000 0.014420 hypomethylated -0.216181 0.017947 weaklyHypometh 1.00000 insignificant chr10 72756064 72757064 100960 ENSG00000210259 0.914967 424 10 0.87141 337 10 0.81208 178 10 0.93804 305 7 0.880817 150 10 0.915554 559 10 0.859459 165 7 0.932290 330 9 0.822605 179 9 0.95505 171 9 0.887050 398 10 0.801528 71 5 0.948377 313 10 0.97269 111 6 0.90054 193 10 0.78762 101 8 0.876970 47 5 0.84268 447 10 0.86382 330 10 0.94394 472 10 0.869642 155 10 0.922898 145 8 0.903993 258 10 0.86100 150 10 0.99165 127 5 0.91866 402 10 0.795455 219 10 0.81052 101 7 0.91643 312 10 0.946176 406 10 0.95239 360 10 0.93855 458 10 0.89290 336 10 0.85952 239 10 0.41349 400 9 0.87556 84 8 0.867995 202 9 0.853383 478 10 0.90859 283 9 0.92374 374 10 0.913253 261 8 0.86740 382 10 0.91193 226 8 0.925873 0.850135 0.76185 0.939802 0.844894 0.91407 0.844264 0.922976 0.816653 0.92903 0.882615 0.832440 0.943098 0.956007 0.895110 0.814731 0.841033 0.89448 0.86379 0.920065 0.928853 0.916250 0.909213 0.866646 0.97615 0.92402 0.87031 0.90182 0.90714 0.941203 0.935593 0.93256 0.82053 0.85375 0.27657 0.75588 0.85022 0.83503 0.88537 0.90300 0.902565 0.85046 0.87390 5 0.894318 0.91513 -0.021162 10 0.89324 0.81276 0.0804786 0.98756 0.051510 insignificant 1 1 insignificant 0.99575 0.136217 insignificant 1 1 insignificant -0.0159057 0.45092 insignificant 1 insignificant 0.894368 0.729155 0.182810 10 0.90054 0.783129 0.117410 2.4497e-07 3.4944e-01 weaklyHypermeth 1.6331e-05 1.0000e+00 weaklyHypermeth 2.9614e-02 2.7474e-01 weaklyHypermeth 9.5530e-01 1.000e+00 insignificant 0.09256825 2.8192e-01 insignificant 1.0000000 insignificant 0.894368 0.87287 0.016347 10 0.90054 0.90511 -0.0045704 2.2432e-01 1.9600e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.4835e-01 0.264956 insignificant 1.00000000 1 insignificant -0.018608 2.4780e-01 insignificant 1.000000 insignificant 0.91591 0.729155 0.196486 10 0.92120 0.783129 0.138073 8.2597e-06 8.9210e-01 weaklyHypermeth 4.8586e-04 1.0000e+00 weaklyHypermeth 9.0199e-04 6.8548e-01 weaklyHypermeth 5.3058e-02 1.0000e+00 weaklyHypermeth 0.108474 0.21855460 insignificant 1.000000 insignificant 0.91591 0.87287 0.0396987 10 0.92120 0.90511 0.0160929 3.1239e-03 0.79885192 weaklyHypermeth 2.8399e-01 1.00000 insignificant 1.3311e-01 0.81672 insignificant 1.00000000 1 insignificant -0.0027018 0.891153 insignificant 1 insignificant 0.729155 0.87287 -0.168710 10 0.783129 0.90511 -0.121980 8.3055e-01 4.2611e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.6245e-01 1.7128e-01 insignificant 1.000000 1.000000 insignificant -0.111176 0.206049 insignificant 1.00000 insignificant chr10 72882526 72883526 100970 CDH23 ENSG00000107736 0.898616 264 6 0.75396 102 6 0.79167 24 0 0.90179 225 6 0.777778 20 0 0.883844 251 6 0.750000 39 4 0.962963 70 6 0.883333 29 4 0.79167 39 4 0.933801 178 6 1.000000 2 0 0.976190 36 4 0.95238 34 4 0.83889 31 6 1.00000 8 0 NA 0 0 0.82858 474 6 0.92978 99 6 0.90837 208 6 0.919872 51 4 0.880952 33 4 0.926768 49 4 0.86667 22 2 0.87047 70 5 0.88768 131 6 0.854743 97 6 0.61111 19 0 0.90154 101 4 0.901019 140 6 0.89969 144 6 0.95674 200 6 0.75725 113 6 0.61852 134 6 0.75556 150 6 NA 0 0 0.710387 95 6 0.855371 227 6 0.70222 112 6 0.82193 226 6 0.833707 249 6 0.80556 36 4 0.80151 177 6 0.903479 0.818441 1.00000 0.904762 0.666667 0.85750 0.812500 1.000000 0.825000 0.93750 0.946657 NA 0.964286 0.928571 0.850000 1.000000 NA 0.83569 0.94466 0.862560 0.919872 0.821429 0.890152 1.000000 0.86821 0.87319 0.90208 0.41667 0.90154 0.924444 0.824462 0.97220 0.76087 0.65000 1.00000 NA 0.80734 0.89243 0.72000 0.80466 0.725654 0.80556 0.76316 0 0.877637 0.88931 -0.013909 6 0.89102 0.90497 -0.0139504 0.98204 0.299783 insignificant 1 1 insignificant 0.81363 0.810047 insignificant 1 1 insignificant 0.0091903 0.77240 lowCoverage 1 lowCoverage 0.877580 0.720445 0.104629 6 0.87285 0.715046 0.157809 3.9397e-06 9.9765e-01 weaklyHypermeth 2.0735e-04 1.0000e+00 weaklyHypermeth 1.1077e-02 9.9924e-01 weaklyHypermeth 4.4307e-01 1.000e+00 insignificant 0.14287937 1.5310e-02 lowCoverage 1.0000000 lowCoverage 0.877580 0.77222 0.097263 6 0.87285 0.79570 0.0771511 6.2258e-06 9.7310e-01 weaklyHypermeth 1.0376e-03 1.00000000 weaklyHypermeth 3.0632e-03 0.994825 weaklyHypermeth 0.43760076 1 insignificant 0.089312 1.4057e-02 lowCoverage 1.000000 lowCoverage 0.88920 0.720445 0.133856 6 0.88913 0.715046 0.174085 2.0088e-05 9.9973e-01 weaklyHypermeth 1.1160e-03 1.0000e+00 weaklyHypermeth 1.0645e-02 9.9104e-01 weaklyHypermeth 3.9573e-01 1.0000e+00 insignificant 0.133689 0.02045951 lowCoverage 1.000000 lowCoverage 0.88920 0.77222 0.1093286 6 0.88913 0.79570 0.0934266 6.2217e-04 0.99653036 weaklyHypermeth 6.2217e-02 1.00000 weaklyHypermeth 8.6599e-03 0.99928 weaklyHypermeth 1.00000000 1 insignificant 0.0801212 0.037234 lowCoverage 1 lowCoverage 0.720445 0.77222 -0.020922 6 0.715046 0.79570 -0.080658 3.9801e-01 5.4123e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4222e-01 4.0156e-01 insignificant 1.000000 1.000000 insignificant -0.053568 0.274575 insignificant 1.00000 insignificant chr10 73087102 73088102 100993 CDH23 ENSG00000107736 0.074074 36 3 0.09898 78 7 0.20604 151 7 0.22727 42 3 0.037322 96 5 0.073509 213 5 0.083015 115 5 0.042311 135 5 0.056705 141 5 0.12969 121 3 0.096658 70 5 0.089697 66 5 0.077727 115 5 0.05600 87 5 0.05600 85 5 0.06000 65 5 0.070892 87 5 0.23243 63 4 0.50000 3 0 0.09567 211 5 0.066667 42 5 0.027126 106 5 0.099405 63 4 0.05000 28 3 0.35714 21 3 0.12784 199 7 0.076768 48 5 0.20758 39 3 0.09000 15 1 0.061101 153 7 0.13382 111 6 0.23546 183 5 0.71091 114 6 0.83333 10 0 0.43860 28 2 0.46667 11 0 0.869131 77 4 0.577797 97 3 0.16667 23 3 0.52381 29 5 0.041667 16 0 0.13333 11 0 0.11616 41 3 0.059387 0.049097 0.16211 0.025078 0.051479 0.11206 0.099915 0.034653 0.046604 0.11566 0.098838 0.089237 0.069279 0.077241 0.077241 0.025862 0.097782 0.13503 0.30619 0.087522 0.091954 0.037416 0.054023 0.021552 0.30296 0.14534 0.10589 0.23890 0.12414 0.087336 0.074365 0.15651 0.67078 0.77011 NA 0.64368 0.85110 0.51230 0.18103 0.36207 0.068966 0.18391 0.10031 0 0.091414 0.11111 -0.016162 5 0.14225 0.11743 0.0248239 0.59833 0.294533 insignificant 1 1 insignificant 0.77808 0.443898 insignificant 1 1 insignificant -0.0095431 0.79546 lowCoverage 1 lowCoverage 0.091414 0.652819 -0.554622 3 0.14225 0.669512 -0.527259 1.0000e+00 1.7594e-43 lowCoverage 1.0000e+00 1.7594e-40 lowCoverage 1.0000e+00 2.4330e-09 lowCoverage 1.0000e+00 2.433e-06 lowCoverage -0.53120609 4.9929e-04 lowCoverage 0.0713267 lowCoverage 0.091414 0.20833 -0.106287 3 0.14225 0.27050 -0.1282433 9.7259e-01 8.6494e-07 lowCoverage 1.0000e+00 0.00086494 lowCoverage 6.8321e-01 0.020489 lowCoverage 1.00000000 1 lowCoverage -0.078128 4.1666e-01 lowCoverage 1.000000 lowCoverage 0.11111 0.652819 -0.539995 3 0.11743 0.669512 -0.552083 1.0000e+00 3.9783e-27 lowCoverage 1.0000e+00 3.9783e-24 lowCoverage 1.0000e+00 5.1879e-08 lowCoverage 1.0000e+00 5.1879e-05 lowCoverage -0.521663 0.00047925 lowCoverage 0.068465 lowCoverage 0.11111 0.20833 -0.0970137 3 0.11743 0.27050 -0.1530672 9.6644e-01 0.00072572 lowCoverage 1.0000e+00 0.72572 lowCoverage 7.8285e-01 0.24254 lowCoverage 1.00000000 1 lowCoverage -0.0685852 0.475468 lowCoverage 1 lowCoverage 0.652819 0.20833 0.448683 3 0.669512 0.27050 0.399016 1.0459e-08 9.9999e-01 lowCoverage 1.0459e-05 1.0000e+00 lowCoverage 4.3626e-05 1.0000e+00 lowCoverage 0.043626 1.000000 lowCoverage 0.453078 0.003389 lowCoverage 0.37656 lowCoverage chr10 73683127 73684127 101010 ENSG00000200170 0.65897 91 5 0.519204 105 6 0.65476 41 4 0.620442 82 4 0.616780 45 5 0.66815 81 6 0.529915 41 3 0.657699 55 5 0.59167 38 5 0.666667 27 4 0.69878 94 5 0.55556 11 1 0.608730 41 4 0.563203 41 5 0.59238 38 5 0.80000 12 1 1.000000 13 1 0.60548 62 3 0.69529 45 4 0.602222 52 5 0.85000 13 0 0.680000 14 2 0.66422 57 5 0.74107 43 3 0.72479 60 4 0.632143 88 5 0.683333 24 4 0.666667 6 0 0.641667 72 5 0.622541 72 4 0.76688 70 6 0.63297 82 6 0.62454 64 5 0.75539 46 4 0.67460 46 4 0.66667 23 1 0.51525 54 2 0.66073 87 5 0.633836 60 3 0.61865 87 5 0.752614 92 5 0.578788 35 3 0.631686 81 6 0.692075 0.503318 0.62446 0.647993 0.522727 0.66585 0.496503 0.736521 0.640152 0.722222 0.61693 0.691364 0.684644 0.724124 0.640693 0.84848 0.873851 0.683988 0.702326 0.653199 0.844697 0.681818 0.63173 0.648990 0.750430 0.620346 0.792929 0.73273 0.643939 0.606761 0.774708 0.63319 0.59028 0.70852 0.68254 0.696970 0.58908 0.60076 0.727022 0.714857 0.720143 0.646350 0.596094 0 0.655446 0.700000 -0.0274902 5 0.745651 0.63643 0.1092207 0.961449 0.1961441 insignificant 1 1 insignificant 0.90893 0.6188264 insignificant 1 1.00000 insignificant -0.0468961 0.136382 lowCoverage 1 lowCoverage 0.655104 0.67188 0.0275497 4 0.709315 0.65482 0.0544913 3.4734e-02 8.1060e-01 lowCoverage 8.4716e-01 1.0000e+00 lowCoverage 1.4865e-01 9.3698e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0042338 9.1733e-01 lowCoverage 1.0000000 lowCoverage 0.651830 0.692090 -0.0317750 5 0.566458 0.595304 -0.0288463 9.6061e-01 3.7544e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8891e-01 0.39739604 insignificant 1.0000e+00 1.00000 insignificant 0.00217971 0.95478112 lowCoverage 1.00000 lowCoverage 0.698492 0.67188 0.0600116 4 0.58449 0.65482 -0.070332 2.4320e-02 9.9655e-01 lowCoverage 5.6558e-01 1.0000e+00 lowCoverage 7.2358e-02 9.8716e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.042662 2.8582e-01 lowCoverage 1.0000000 lowCoverage 0.699664 0.694051 -0.0013943 5 0.68191 0.694522 -0.0126150 7.9917e-01 0.7549920 insignificant 1.0000e+00 1 insignificant 7.2457e-01 0.858094 insignificant 1.0000e+00 1 insignificant 0.0490758 0.1996005 lowCoverage 1.00000 lowCoverage 0.67085 0.694051 -0.057195 4 0.59729 0.694522 -0.097227 9.8872e-01 6.1685e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.9095e-01 0.18090005 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0064136 8.8559e-01 lowCoverage 1.000000 lowCoverage chr10 73776083 73777083 101014 DDIT4 ENSG00000168209 0.67702 130 5 0.609974 70 5 0.58986 114 5 0.674286 62 5 0.650350 63 5 0.69156 213 5 0.658462 78 5 0.652778 60 5 0.66397 76 5 0.681608 78 5 0.61985 134 5 0.55761 57 5 0.672622 107 5 NA 0 0 0.73333 67 5 0.59414 50 5 0.569118 69 5 0.64530 75 5 0.65092 76 5 0.583495 232 5 0.60571 29 5 0.650000 47 5 0.63810 74 5 0.60051 54 5 0.66000 31 5 0.624615 113 5 0.720000 29 5 0.560000 43 5 0.685397 108 5 0.596836 104 5 0.62769 123 5 0.61935 232 5 0.67227 103 5 0.49156 69 5 0.56667 40 3 0.59429 29 5 0.55833 37 5 0.58842 118 5 0.667492 90 5 0.68021 85 5 0.600000 69 5 0.697084 130 5 0.700752 83 5 0.684670 0.624634 0.60437 0.676730 0.651933 0.69842 0.664731 0.670947 0.676701 0.694630 0.62179 0.569796 0.685865 NA 0.734801 0.58628 0.573976 0.656050 0.665301 0.593168 0.611321 0.639937 0.64361 0.595054 0.661006 0.644122 0.716981 0.56478 0.700020 0.613884 0.645573 0.62407 0.68257 0.51244 0.57757 0.603774 0.56546 0.59879 0.678427 0.676682 0.598882 0.703370 0.710172 5 0.674213 0.681864 0.0014242 5 0.642032 0.64026 0.0017711 0.684893 0.6886737 insignificant 1 1 insignificant 0.64091 0.6041505 insignificant 1 1.00000 insignificant 0.0085055 0.606596 lowCoverage 1 lowCoverage 0.674213 0.63384 0.0468460 5 0.642032 0.59171 0.0503245 5.8058e-06 8.5340e-01 weaklyHypermeth 3.0557e-04 1.0000e+00 weaklyHypermeth 4.0822e-03 9.7745e-01 weaklyHypermeth 0.21485304 1.0000e+00 insignificant 0.0622666 4.8922e-02 lowCoverage 1.0000000 lowCoverage 0.674213 0.704595 -0.0103593 5 0.642032 0.666130 -0.0240978 8.5916e-01 1.0205e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.9227e-01 0.10338016 insignificant 1.0000e+00 1.00000 insignificant -0.02825203 0.22376441 lowCoverage 1.00000 lowCoverage 0.681864 0.63384 0.0450733 5 0.64026 0.59171 0.048553 6.1855e-04 9.2193e-01 weaklyHypermeth 2.1329e-02 1.0000e+00 weaklyHypermeth 1.4292e-02 9.1430e-01 weaklyHypermeth 0.571673 1.0000e+00 insignificant 0.053761 8.2429e-02 lowCoverage 1.0000000 lowCoverage 0.681864 0.704595 -0.0121511 5 0.64026 0.666130 -0.0258690 8.7000e-01 0.0367353 weaklyHypometh 1.0000e+00 1 insignificant 9.2559e-01 0.195978 insignificant 1.0000e+00 1 insignificant -0.0367576 0.1347313 insignificant 1.00000 insignificant 0.63384 0.704595 -0.061203 5 0.59171 0.666130 -0.074422 7.3394e-01 1.5452e-04 weaklyHypometh 1.0000e+00 0.0118864 weaklyHypometh 9.1978e-01 0.00170272 weaklyHypometh 1.0000e+00 0.17027 insignificant -0.0905186 1.5301e-02 lowCoverage 0.728596 lowCoverage chr10 75230145 75231145 101057 KIAA0913 ENSG00000214655 0.96556 190 5 0.991810 182 7 1.00000 28 4 0.979825 258 7 0.966667 30 5 0.97801 292 5 0.968254 59 7 0.978022 62 5 0.95000 20 0 0.971429 27 5 0.95033 128 7 NA 0 0 0.981818 54 5 0.960000 25 5 1.00000 20 0 NA 0 0 NA 0 0 0.96667 196 5 0.97778 45 5 0.946542 90 6 1.00000 22 0 1.000000 20 0 0.83929 42 5 1.00000 44 5 0.98758 116 5 0.956140 97 5 1.000000 28 4 1.000000 10 0 0.928095 64 5 1.000000 117 5 0.98422 187 5 0.94517 214 7 0.98000 50 5 0.93333 60 5 1.00000 60 5 0.98214 164 5 0.78571 42 5 0.96782 68 5 0.979403 140 5 0.99320 116 5 0.909116 199 5 1.000000 20 0 0.978571 111 5 0.949284 0.989211 1.00000 0.971755 0.964444 0.96853 0.954074 0.971282 0.946667 0.960000 0.91866 NA 0.980606 0.957333 1.000000 NA NA 0.950222 0.976296 0.924085 1.000000 1.000000 0.97333 1.000000 0.982029 0.945263 1.000000 1.00000 0.930413 1.000000 0.977180 0.95152 0.97867 0.92889 1.00000 0.973333 1.00000 0.95194 0.969242 0.989841 0.905018 1.000000 0.970000 0 0.963636 0.969823 -0.0058008 5 0.972972 0.96082 0.0121567 0.034240 0.3063282 inconclusive 1 1 insignificant 0.46875 0.2699832 insignificant 1 1.00000 insignificant 0.0024713 0.866845 lowCoverage 1 lowCoverage 0.963636 0.96622 -0.0033798 5 0.972972 0.87315 0.0998248 7.1301e-03 6.8036e-02 inconclusive 1.9204e-01 1.0000e+00 insignificant 2.7637e-01 2.3010e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0310106 3.8506e-01 lowCoverage 1.0000000 lowCoverage 0.963636 0.955631 0.0079894 5 0.972972 0.967134 0.0058385 7.2850e-01 9.4840e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6502e-01 0.89742637 insignificant 1.0000e+00 1.00000 insignificant 0.00045445 0.97947839 lowCoverage 1.00000 lowCoverage 0.969823 0.96622 0.0045104 5 0.96082 0.87315 0.087668 8.7954e-02 2.4829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7100e-01 4.5739e-01 insignificant 1.000000 1.0000e+00 insignificant 0.028539 4.4585e-01 lowCoverage 1.0000000 lowCoverage 0.969823 0.955631 0.0141836 5 0.96082 0.967134 -0.0063182 2.5860e-01 0.4752032 insignificant 1.0000e+00 1 insignificant 7.3787e-01 0.774455 insignificant 1.0000e+00 1 insignificant -0.0020169 0.9267646 lowCoverage 1.00000 lowCoverage 0.96622 0.955631 0.011353 5 0.87315 0.967134 -0.093986 1.7841e-01 5.1236e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.8894e-01 0.81117202 insignificant 1.0000e+00 1.00000 insignificant -0.0305561 4.2670e-01 lowCoverage 1.000000 lowCoverage chr10 75338439 75339439 101071 CAMK2G ENSG00000148660 0.65733 181 5 0.540643 108 5 0.51988 153 5 0.690374 96 5 0.612842 62 5 0.66124 201 5 0.639758 137 5 0.519697 85 5 0.61416 97 5 0.755350 65 5 0.55567 157 4 0.49393 98 5 0.417143 124 5 0.833333 6 1 0.62421 85 5 0.62766 76 5 0.635000 84 5 0.77947 115 5 0.51397 79 5 0.751824 216 5 0.71503 71 5 0.571944 73 5 0.64374 128 5 0.64841 36 4 0.74595 58 5 0.724967 116 5 0.643913 38 3 0.871429 27 1 0.766712 67 5 0.533775 136 5 0.77484 131 5 0.60009 262 5 0.67829 130 5 0.75762 83 5 0.38386 156 5 0.66000 31 3 0.52143 81 5 0.75126 157 5 0.768144 147 5 0.76504 116 5 0.642444 138 5 0.688725 146 5 0.756813 169 5 0.718836 0.639830 0.62041 0.790366 0.697706 0.77014 0.714815 0.664644 0.699032 0.836038 0.66926 0.604508 0.539417 NA 0.710255 0.71296 0.757461 0.821563 0.649967 0.809407 0.817761 0.717961 0.73132 0.780333 0.824626 0.793877 0.736922 0.87996 0.819125 0.660356 0.827213 0.66729 0.75628 0.77895 0.53895 0.736300 0.65420 0.79695 0.837278 0.853925 0.732945 0.761049 0.835314 4 0.675506 0.712161 -0.0290415 5 0.624232 0.66029 -0.0360631 0.923963 0.1337874 insignificant 1 1 insignificant 0.95850 0.0020071 weaklyHypometh 1 0.66905 insignificant -0.0645604 0.090670 lowCoverage 1 lowCoverage 0.675506 0.64890 0.0215501 5 0.624232 0.60362 0.0206118 4.2393e-01 8.7971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1419e-01 4.0997e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0032366 9.6123e-01 lowCoverage 1.0000000 lowCoverage 0.675506 0.750000 -0.0843603 5 0.624232 0.727221 -0.1029895 9.8513e-01 1.6117e-03 weaklyHypometh 1.0000e+00 0.805827 insignificant 9.8020e-01 0.00172494 weaklyHypometh 1.0000e+00 0.86247 insignificant -0.10205840 0.01179507 lowCoverage 0.94680 lowCoverage 0.712161 0.64890 0.0509414 5 0.66029 0.60362 0.056675 1.7667e-01 9.4222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5324e-01 9.2944e-01 insignificant 1.000000 1.0000e+00 insignificant 0.061324 3.8128e-01 lowCoverage 1.0000000 lowCoverage 0.712161 0.750000 -0.0619478 5 0.66029 0.727221 -0.0669264 9.8949e-01 0.0286043 weaklyHypometh 1.0000e+00 1 insignificant 9.6735e-01 0.325388 insignificant 1.0000e+00 1 insignificant -0.0374980 0.3368048 lowCoverage 1.00000 lowCoverage 0.64890 0.750000 -0.123871 5 0.60362 0.727221 -0.123601 9.7488e-01 1.7342e-02 weaklyHypometh 1.0000e+00 0.6423113 insignificant 9.7642e-01 0.11514626 insignificant 1.0000e+00 1.00000 insignificant -0.0988218 1.7229e-01 lowCoverage 1.000000 lowCoverage chr10 76279794 76280794 101169 MYST4 ENSG00000156650 0.83457 191 5 0.911977 43 4 0.83412 65 5 0.848551 119 5 0.651313 48 5 0.89208 158 5 0.764652 57 5 0.818745 66 5 0.83866 51 5 0.847473 65 5 0.82932 75 5 0.70429 41 5 0.841830 58 5 NA 0 0 0.77299 77 5 0.89231 45 5 0.802381 58 5 0.88592 91 5 0.79524 65 5 0.891978 143 5 0.91667 16 2 0.885897 47 5 0.88179 99 5 0.91000 23 3 0.76000 33 5 0.830688 83 5 0.800000 24 2 0.942857 24 3 0.765357 50 5 0.866304 78 5 0.80887 106 5 0.85007 185 5 0.77476 55 4 0.76349 61 5 0.74667 38 4 0.87111 31 3 0.87762 24 2 0.80842 67 5 0.874989 164 5 0.89326 173 5 0.821185 129 5 0.855981 174 5 0.845452 172 5 0.845080 0.901971 0.79500 0.846638 0.635536 0.87434 0.784446 0.851297 0.801516 0.874737 0.86743 0.759660 0.879353 NA 0.778946 0.84552 0.876464 0.885370 0.806694 0.876210 0.936794 0.865017 0.86947 0.870902 0.703279 0.821797 0.822040 0.91803 0.770389 0.858801 0.844481 0.84230 0.76717 0.75039 0.76489 0.844262 0.84581 0.82957 0.864661 0.884509 0.849512 0.857741 0.852147 2 0.835752 0.846354 -0.0123237 5 0.830356 0.85021 -0.0198492 0.822278 0.1930392 insignificant 1 1 insignificant 0.92070 0.0568642 insignificant 1 1.00000 insignificant -0.0274159 0.243300 lowCoverage 1 lowCoverage 0.835752 0.80072 0.0370996 4 0.830356 0.80227 0.0280848 6.2407e-03 7.4640e-01 lowCoverage 1.7335e-01 1.0000e+00 lowCoverage 1.3530e-01 8.8758e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.0171131 5.4714e-01 lowCoverage 1.0000000 lowCoverage 0.835752 0.863300 -0.0284173 5 0.830356 0.860887 -0.0305305 9.5509e-01 2.4661e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4600e-01 0.35467564 insignificant 1.0000e+00 1.00000 insignificant -0.03404755 0.10043229 lowCoverage 1.00000 lowCoverage 0.846354 0.80072 0.0478022 4 0.85021 0.80227 0.047934 6.7304e-03 9.2827e-01 lowCoverage 1.9230e-01 1.0000e+00 lowCoverage 1.4116e-02 9.8311e-01 lowCoverage 0.571673 1.0000e+00 lowCoverage 0.044529 1.4857e-01 lowCoverage 1.0000000 lowCoverage 0.846354 0.863300 -0.0144910 5 0.85021 0.860887 -0.0106812 8.0363e-01 0.4806486 insignificant 1.0000e+00 1 insignificant 1.5372e-01 0.659351 insignificant 1.0000e+00 1 insignificant -0.0066316 0.7585083 lowCoverage 1.00000 lowCoverage 0.80072 0.863300 -0.063226 4 0.80227 0.860887 -0.058615 9.6831e-01 3.9232e-03 lowCoverage 1.0000e+00 0.1961610 lowCoverage 9.6885e-01 0.12284984 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0511606 8.6613e-02 lowCoverage 1.000000 lowCoverage chr10 76445945 76446945 101212 ENSG00000210400 0.55616 222 5 0.538740 156 5 0.48562 133 5 0.650977 81 5 0.626923 62 5 0.61897 242 5 0.580480 114 5 0.615357 123 5 0.56286 112 5 0.597785 93 5 0.60620 159 5 0.62889 58 5 0.616206 95 5 NA 0 0 0.60631 111 5 0.56667 36 2 0.556579 66 5 0.59457 112 5 0.50395 139 5 0.607724 167 5 0.61667 30 3 0.533333 25 2 0.65187 95 5 0.77619 30 2 0.71714 31 5 0.633346 195 5 0.677839 40 3 0.463095 23 2 0.562229 95 5 0.551917 210 5 0.62704 209 5 0.63319 226 5 0.53998 122 5 0.52338 86 5 0.42679 108 5 0.74346 48 3 0.53187 38 3 0.54662 217 5 0.552921 130 5 0.64643 180 5 0.593043 112 5 0.645556 152 5 0.674233 116 5 0.610386 0.559937 0.54246 0.699243 0.663125 0.66207 0.639192 0.658981 0.638719 0.631680 0.61347 0.683683 0.634381 NA 0.670753 0.67890 0.578993 0.628412 0.564796 0.604532 0.594406 0.578671 0.71806 0.632368 0.805495 0.692354 0.706313 0.48751 0.625228 0.603855 0.664724 0.66914 0.55984 0.52743 0.45452 0.696684 0.56248 0.59124 0.582381 0.669165 0.626817 0.696320 0.732166 2 0.606313 0.645161 -0.0298967 5 0.579891 0.60904 -0.0291468 0.983506 0.0458228 weaklyHypometh 1 1 insignificant 0.95114 0.3266995 insignificant 1 1.00000 insignificant -0.0350078 0.204508 lowCoverage 1 lowCoverage 0.606313 0.55250 0.0603885 5 0.579891 0.52389 0.0559968 3.5941e-03 9.9678e-01 weaklyHypermeth 1.0571e-01 1.0000e+00 insignificant 4.9886e-02 9.2150e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.0332979 4.7496e-01 lowCoverage 1.0000000 lowCoverage 0.606313 0.636232 -0.0473843 5 0.579891 0.628059 -0.0481681 9.9892e-01 1.6468e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8826e-01 0.05557536 insignificant 1.0000e+00 1.00000 insignificant -0.03712256 0.17386031 lowCoverage 1.00000 lowCoverage 0.645161 0.55250 0.0910980 5 0.60904 0.52389 0.085144 9.0214e-04 9.9994e-01 weaklyHypermeth 3.0071e-02 1.0000e+00 weaklyHypermeth 2.9258e-02 9.9692e-01 weaklyHypermeth 0.921361 1.0000e+00 insignificant 0.068306 1.9770e-01 lowCoverage 1.0000000 lowCoverage 0.645161 0.636232 -0.0171683 5 0.60904 0.628059 -0.0190213 9.2690e-01 0.3290830 insignificant 1.0000e+00 1 insignificant 9.0065e-01 0.491247 insignificant 1.0000e+00 1 insignificant -0.0021148 0.9494574 lowCoverage 1.00000 lowCoverage 0.55250 0.636232 -0.107368 5 0.52389 0.628059 -0.104165 9.9992e-01 1.7804e-03 weaklyHypometh 1.0000e+00 0.1044357 insignificant 9.9858e-01 0.02778596 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0704205 1.8052e-01 lowCoverage 1.000000 lowCoverage chr10 77605414 77606414 101485 ENSG00000221232 0.85500 268 7 0.751134 94 7 0.80333 37 2 0.838260 266 11 0.916667 28 1 0.77885 393 11 0.770139 34 2 0.691667 26 1 0.86111 41 5 0.886409 39 3 0.71350 118 7 0.53333 9 0 0.762500 45 2 NA 0 0 0.61833 35 4 0.55556 8 0 0.380952 14 0 0.78289 214 6 0.76326 77 5 0.824189 320 10 0.78139 42 3 0.664848 121 6 0.81071 143 6 0.75000 34 1 0.86014 76 7 0.857274 175 11 0.676587 34 1 0.583333 7 0 0.824242 46 5 0.778916 134 8 0.74595 153 8 0.72432 426 10 0.77802 85 8 0.70000 41 3 0.70581 183 7 0.76333 34 4 0.61806 26 1 0.76209 168 8 0.806726 163 6 0.83934 248 11 0.780549 213 7 0.789066 121 6 0.760464 274 8 0.714830 0.636713 0.74462 0.754452 0.841925 0.66320 0.643000 0.444044 0.811828 0.672619 0.60504 0.544740 0.790323 NA 0.698925 0.46237 0.376840 0.702892 0.647177 0.749120 0.852151 0.744379 0.68751 0.596774 0.774419 0.749676 0.581413 0.67520 0.666667 0.686636 0.753614 0.73415 0.67742 0.66129 0.69254 0.913543 0.69086 0.68518 0.715609 0.809588 0.673823 0.822706 0.691866 0 0.790416 0.773544 0.0127675 8 0.833103 0.76475 0.0683513 0.038843 0.2036816 weaklyHypermeth 1 1 insignificant 0.61447 0.3841012 insignificant 1 1.00000 insignificant -0.0133831 0.735306 lowCoverage 1 lowCoverage 0.790416 0.74488 0.0573379 7 0.833103 0.68361 0.1494909 8.7639e-04 8.2698e-01 weaklyHypermeth 3.1300e-02 1.0000e+00 weaklyHypermeth 1.9083e-01 5.0196e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0202062 6.1521e-01 lowCoverage 1.0000000 lowCoverage 0.790416 0.793916 -0.0032349 7 0.833103 0.785861 0.0472417 9.4314e-01 5.4074e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3834e-01 0.72238007 insignificant 1.0000e+00 1.00000 insignificant -0.05380254 0.12576256 lowCoverage 1.00000 lowCoverage 0.773544 0.74488 0.0409724 7 0.76475 0.68361 0.081140 1.5578e-02 9.5948e-01 weaklyHypermeth 3.8946e-01 1.0000e+00 insignificant 2.3852e-01 8.4483e-01 insignificant 1.000000 1.0000e+00 insignificant 0.033589 3.4374e-01 insignificant 1.0000000 insignificant 0.773544 0.793916 -0.0190925 7 0.76475 0.785861 -0.0211095 9.6692e-01 0.4895315 insignificant 1.0000e+00 1 insignificant 9.0310e-01 0.764121 insignificant 1.0000e+00 1 insignificant -0.0404195 0.1604223 insignificant 1.00000 insignificant 0.74488 0.793916 -0.053611 6 0.68361 0.785861 -0.102249 9.8985e-01 8.6074e-03 weaklyHypometh 1.0000e+00 0.3677198 insignificant 9.0257e-01 0.40307755 insignificant 1.0000e+00 1.00000 insignificant -0.0740087 3.0503e-02 weaklyHypometh 1.000000 insignificant chr10 79020231 79021231 101760 ENSG00000199592 0.89434 186 8 0.840554 168 7 0.84921 161 8 0.948526 188 8 0.649826 216 8 0.87005 215 8 0.765603 229 8 0.890001 190 8 0.86711 167 8 0.766215 247 8 0.60748 195 8 0.86924 138 8 0.735374 255 8 0.847727 80 7 0.75244 199 8 0.82541 111 6 0.641101 149 6 0.84832 142 8 0.67330 120 8 0.937161 153 8 0.73167 33 2 0.990385 92 8 0.73731 170 9 0.63521 75 6 0.71212 56 5 0.926995 180 8 0.696609 111 8 0.802597 80 5 0.828145 189 8 0.843386 173 8 0.97660 177 6 0.89273 263 8 0.81393 154 8 0.81046 186 8 0.83290 189 7 0.97500 57 8 0.75637 114 6 0.96084 169 8 0.951237 209 8 0.90501 181 8 0.955804 135 8 0.926630 237 8 0.768235 234 6 0.914025 0.891183 0.89516 0.948814 0.766781 0.89976 0.822295 0.825340 0.825336 0.857021 0.83743 0.859612 0.886641 0.816457 0.859838 0.77289 0.749120 0.936273 0.859368 0.929113 0.911648 0.993226 0.88836 0.876389 0.936553 0.941853 0.896765 0.91780 0.826495 0.946188 0.968736 0.92745 0.90681 0.84834 0.96217 0.990909 0.88842 0.97912 0.947220 0.937678 0.973691 0.941424 0.952655 6 0.850670 0.898687 -0.0512102 8 0.785418 0.73570 0.0497205 0.487209 0.0053392 weaklyHypometh 1 1 insignificant 0.64956 0.0072113 weaklyHypometh 1 1.00000 insignificant -0.0105293 0.795704 insignificant 1 insignificant 0.850670 0.90449 -0.0582731 8 0.785418 0.78302 0.0023971 7.8138e-01 1.7937e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6063e-01 7.3874e-03 weaklyHypometh 1.00000000 6.7158e-01 insignificant -0.0542988 2.3388e-01 insignificant 1.0000000 insignificant 0.850670 0.946787 -0.0935847 8 0.785418 0.860334 -0.0749164 9.9645e-01 8.6206e-05 weaklyHypometh 1.0000e+00 0.086206 weaklyHypometh 9.8687e-01 0.00012728 weaklyHypometh 1.0000e+00 0.12728 insignificant -0.09743292 0.04622250 weaklyHypometh 1.00000 insignificant 0.898687 0.90449 -0.0084048 8 0.73570 0.78302 -0.047323 6.3007e-01 2.7294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1272e-01 4.3698e-01 insignificant 1.000000 1.0000e+00 insignificant -0.043769 3.9034e-01 insignificant 1.0000000 insignificant 0.898687 0.946787 -0.0371211 8 0.73570 0.860334 -0.1246369 9.8981e-01 0.0077705 weaklyHypometh 1.0000e+00 1 insignificant 8.5170e-01 0.052649 insignificant 1.0000e+00 1 insignificant -0.0869036 0.0965756 insignificant 1.00000 insignificant 0.90449 0.946787 -0.034073 8 0.78302 0.860334 -0.077314 9.6068e-01 8.0965e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.3007e-01 0.48536276 insignificant 1.0000e+00 1.00000 insignificant -0.0431341 4.1129e-01 insignificant 1.000000 insignificant chr10 79607117 79608117 101783 ENSG00000220250 0.77956 204 6 0.785575 262 6 0.63439 113 6 0.602994 204 6 0.628846 72 6 0.66814 214 5 0.661568 72 3 0.771818 155 6 0.60938 125 3 0.509315 95 3 0.62908 227 6 0.46190 33 2 0.557540 155 3 0.905308 82 3 0.83196 158 3 0.45278 24 3 0.000000 7 0 0.49234 306 4 0.62057 199 4 0.671508 123 4 0.73519 75 7 0.361895 94 3 0.83655 128 6 0.60280 81 5 0.74229 127 6 0.639750 295 6 0.581818 93 3 0.673965 76 3 0.742061 167 4 0.687037 307 6 0.79703 265 6 0.89298 180 6 0.55085 220 6 0.81427 88 5 0.62025 338 6 0.24348 58 4 0.69524 159 5 0.46628 263 6 0.163312 327 6 0.33429 181 6 0.431945 166 5 0.674316 139 4 0.399675 179 6 0.770859 0.734758 0.63143 0.529240 0.759412 0.50072 0.848463 0.769068 0.737157 0.674450 0.89228 0.772042 0.567830 0.764474 0.678990 0.73049 0.106239 0.508079 0.717984 0.498585 0.975513 0.263989 0.77039 0.644306 0.540751 0.662189 0.621930 0.65329 0.689743 0.709315 0.717986 0.83188 0.74243 0.94660 0.74576 0.509692 0.87876 0.54574 0.040064 0.184838 0.160294 0.364827 0.206960 3 0.680565 0.706942 -0.0244358 6 0.611764 0.57596 0.0358010 0.998878 0.1026558 insignificant 1 1 insignificant 0.95602 0.4344304 insignificant 1 1.00000 insignificant -0.0773843 0.194151 lowCoverage 1 lowCoverage 0.680452 0.65244 -0.0136883 6 0.568626 0.47569 0.0929316 1.9884e-04 1.0811e-01 inconclusive 7.9537e-03 1.0000e+00 inconclusive 1.0188e-01 1.6939e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 0.0486689 6.0783e-01 lowCoverage 1.0000000 lowCoverage 0.686051 0.190716 0.4994411 6 0.709113 0.319446 0.3896670 4.3417e-25 9.0796e-01 hypermethylated 4.3417e-22 1.000000 hypermethylated 3.2516e-09 0.98938322 hypermethylated 1.6258e-06 1.00000 hypermethylated 0.21302111 0.05964299 lowCoverage 1.00000 lowCoverage 0.707317 0.65244 0.0201686 6 0.63996 0.47569 0.164264 2.6355e-05 8.5157e-01 weaklyHypermeth 1.0542e-03 1.0000e+00 weaklyHypermeth 1.7086e-01 3.8836e-01 insignificant 1.000000 1.0000e+00 insignificant 0.126053 2.0148e-01 insignificant 1.0000000 insignificant 0.710779 0.190524 0.5222908 6 0.68126 0.279515 0.4017477 8.8253e-22 0.9990369 hypermethylated 8.8253e-19 1 hypermethylated 2.4756e-08 0.997236 hypermethylated 2.4756e-05 1 hypermethylated 0.2904054 0.0196061 weaklyHypermeth 1.00000 insignificant 0.66819 0.190716 0.484981 6 0.58363 0.319446 0.264185 2.8836e-08 7.4690e-01 hypermethylated 4.1195e-06 1.0000000 hypermethylated 2.5862e-04 0.82928458 hypermethylated 6.4655e-02 1.00000 hypermethylated 0.1643522 1.8916e-01 insignificant 1.000000 insignificant chr10 80342809 80343809 101871 ENSG00000223243 0.19557 447 12 0.248170 390 12 0.32426 312 13 0.102675 246 8 0.069393 322 13 0.31689 377 11 0.279188 437 13 0.223737 292 11 0.19186 488 11 0.219128 265 13 0.47370 413 11 0.38070 218 13 0.094887 358 11 0.102299 182 6 0.09618 475 10 0.18481 252 11 0.058213 222 9 0.22397 370 7 0.11511 274 10 0.115624 390 12 0.59983 118 10 0.300113 143 7 0.29074 264 13 0.32833 187 10 0.39533 109 8 0.124004 473 12 0.094194 214 9 0.352714 173 10 0.189966 264 13 0.050630 522 12 0.14989 423 12 0.68697 250 12 0.69895 273 12 0.67417 260 13 0.70000 112 8 0.34500 41 2 0.53073 171 10 0.69093 234 10 0.093640 409 8 0.29780 309 11 0.105353 273 6 0.266343 262 8 0.229945 256 11 0.138192 0.102354 0.25246 0.045431 0.046442 0.16521 0.184094 0.081596 0.082312 0.106860 0.15485 0.358892 0.024456 0.176708 0.071305 0.19568 0.039478 0.194843 0.030578 0.088024 0.549114 0.129381 0.26075 0.351723 0.093957 0.127197 0.090148 0.14599 0.038558 0.038822 0.024434 0.76917 0.71667 0.75456 0.82988 0.255518 0.65710 0.77660 0.023391 0.166760 0.027708 0.209080 0.118233 5 0.135661 0.187261 -0.0597114 11 0.342250 0.39936 -0.0571143 0.999991 0.0238133 weaklyHypometh 1 1 insignificant 0.99865 0.3413496 insignificant 1 1.00000 insignificant -0.0960744 0.140870 insignificant 1 insignificant 0.134446 0.72686 -0.5921141 11 0.221148 0.67654 -0.4553921 1.0000e+00 3.0424e-74 hypomethylated 1.0000e+00 3.0424e-71 hypomethylated 1.0000e+00 5.6241e-14 hypomethylated 1.00000000 5.6241e-11 hypomethylated -0.4058141 3.9425e-04 hypomethylated 0.0358413 hypomethylated 0.133890 0.113320 0.0049405 9 0.182336 0.217756 -0.0354202 7.2224e-01 9.2583e-02 insignificant 1.0000e+00 1.000000 insignificant 3.1394e-01 0.50670098 insignificant 1.0000e+00 1.00000 insignificant 0.00220142 0.96528116 insignificant 1.00000 insignificant 0.185280 0.72686 -0.5346741 11 0.29637 0.67654 -0.380166 9.9999e-01 6.0506e-28 hypomethylated 1.0000e+00 6.0506e-25 hypomethylated 9.9999e-01 2.4844e-08 hypomethylated 1.000000 1.2422e-05 hypomethylated -0.309740 2.0973e-03 weaklyHypometh 0.1613303 insignificant 0.185280 0.113320 0.0631394 9 0.26969 0.217756 0.0519345 2.9025e-01 0.9659265 insignificant 1.0000e+00 1 insignificant 9.8947e-02 0.979833 insignificant 1.0000e+00 1 insignificant 0.0982758 0.1838459 insignificant 1.00000 insignificant 0.72627 0.111776 0.619610 9 0.65173 0.200116 0.451617 1.7040e-26 9.9999e-01 hypermethylated 1.7040e-23 1.0000000 hypermethylated 5.3898e-08 0.99999942 hypermethylated 5.3898e-05 1.00000 hypermethylated 0.4080155 3.6415e-04 hypermethylated 0.072830 hypermethylated chr10 80394392 80395392 101880 ENSG00000223243 0.11877 236 6 0.069543 126 6 0.16990 176 7 0.076145 317 7 0.073165 129 5 0.15503 305 7 0.058802 168 6 0.074533 186 7 0.08247 174 7 0.069083 295 7 0.17217 173 7 0.14658 175 6 0.039223 287 7 0.031721 121 3 0.03773 284 7 0.20011 96 7 0.171429 40 4 0.06862 385 6 0.00000 119 6 0.067179 283 7 0.15103 88 6 0.088786 211 7 0.21520 149 6 0.11837 52 5 0.12264 147 7 0.087387 225 7 0.080645 142 6 0.032738 121 7 0.079305 112 6 0.034029 240 7 0.07853 170 7 0.17558 256 7 0.44606 55 4 0.73886 87 6 0.43592 94 3 0.47798 61 6 0.54365 40 4 0.45976 152 7 0.046054 385 7 0.14509 267 6 0.020336 303 6 0.017854 344 6 0.090079 347 6 0.088503 0.036090 0.10111 0.043229 0.051351 0.11429 0.036128 0.052045 0.043199 0.052082 0.11957 0.092695 0.030432 0.057224 0.033710 0.11090 0.275090 0.061378 0.000000 0.050725 0.099178 0.063532 0.12590 0.064776 0.107266 0.051541 0.070319 0.01790 0.061262 0.024152 0.044979 0.12141 0.44740 0.79370 0.39908 0.330368 0.53971 0.31047 0.032106 0.077874 0.017782 0.012276 0.083789 5 0.061104 0.079979 -0.0071410 7 0.092928 0.10337 -0.0104456 0.879454 0.2863650 insignificant 1 1 insignificant 0.57874 0.4815547 insignificant 1 1.00000 insignificant -0.0112424 0.581480 insignificant 1 insignificant 0.061104 0.49080 -0.4221205 6 0.092928 0.54648 -0.4535561 1.0000e+00 3.1311e-38 hypomethylated 1.0000e+00 1.5656e-35 hypomethylated 1.0000e+00 2.7153e-12 hypomethylated 1.00000000 1.3577e-09 hypomethylated -0.4229290 1.6406e-04 hypomethylated 0.0164058 hypomethylated 0.061104 0.040705 0.0173547 6 0.092928 0.060257 0.0326709 8.6635e-02 9.1058e-01 insignificant 1.0000e+00 1.000000 insignificant 1.4893e-01 0.91113819 insignificant 1.0000e+00 1.00000 insignificant 0.03022746 0.30633376 insignificant 1.00000 insignificant 0.079979 0.49080 -0.4085374 6 0.10337 0.54648 -0.443110 1.0000e+00 4.2394e-23 hypomethylated 1.0000e+00 2.1197e-20 hypomethylated 1.0000e+00 3.9104e-10 hypomethylated 1.000000 3.9104e-07 hypomethylated -0.411687 1.4620e-04 hypomethylated 0.0162446 hypomethylated 0.079979 0.040705 0.0357396 6 0.10337 0.060257 0.0431165 7.9805e-02 0.9340223 insignificant 1.0000e+00 1 insignificant 5.3940e-02 0.804882 insignificant 1.0000e+00 1 insignificant 0.0414699 0.1891313 insignificant 1.00000 insignificant 0.49080 0.040705 0.441408 6 0.54648 0.060257 0.486227 3.0462e-14 1.0000e+00 hypermethylated 1.0154e-11 1.0000000 hypermethylated 2.5874e-07 0.99999959 hypermethylated 1.2937e-04 1.00000 hypermethylated 0.4531564 4.4274e-05 hypermethylated 0.018081 hypermethylated chr10 80606476 80607476 101898 ZMIZ1 ENSG00000108175 0.79007 43 3 0.655000 44 3 0.61810 47 3 0.794299 45 3 0.635101 40 4 0.82126 51 4 0.917593 53 5 0.773295 31 3 0.70417 46 3 0.666667 33 3 0.77440 63 4 0.65807 37 4 0.811569 107 6 NA 0 0 0.74982 66 3 0.55000 16 1 0.615385 39 4 0.66693 77 6 0.83469 64 5 0.718750 47 4 0.88361 74 5 0.490079 25 2 0.79425 68 5 0.73333 48 4 0.76389 31 2 0.857714 120 6 0.705769 44 4 0.534286 34 4 0.557143 26 3 0.887179 91 6 0.86677 116 6 0.85357 195 6 0.48958 69 5 0.12500 38 3 0.44444 11 0 0.00000 22 3 0.41946 63 6 0.43529 121 6 0.487879 30 4 0.80000 46 3 1.000000 10 0 0.317857 36 3 0.779662 124 4 0.826607 0.630435 0.81470 0.907594 0.674901 0.87040 0.920290 0.806818 0.807971 0.913043 0.86563 0.682885 0.881293 NA 0.764178 0.63043 0.752508 0.493789 0.808528 0.744565 0.893992 0.293478 0.75336 0.747412 0.619565 0.831263 0.805686 0.78944 0.639752 0.878261 0.825138 0.83509 0.14583 0.10870 0.12632 0.046611 0.24122 0.10806 0.560606 0.644269 0.946304 0.276398 0.720000 0 0.799789 0.816514 -0.0263877 5 0.773547 0.82851 -0.0549681 0.788601 0.0578701 insignificant 1 1 insignificant 0.45351 0.3087101 insignificant 1 1.00000 insignificant -0.0200100 0.674423 lowCoverage 1 lowCoverage 0.799789 0.35494 0.5111933 5 0.773547 0.43804 0.3355093 2.9221e-23 8.5629e-01 hypermethylated 5.8443e-21 1.0000e+00 hypermethylated 8.1423e-07 9.2584e-01 hypermethylated 0.00014629 1.0000e+00 hypermethylated 0.4049920 3.7901e-03 lowCoverage 0.2915464 lowCoverage 0.799789 0.646341 0.1894098 5 0.773547 0.668011 0.1055358 2.4337e-05 9.2430e-01 weaklyHypermeth 4.4314e-03 1.000000 weaklyHypermeth 3.1823e-01 0.47743608 insignificant 1.0000e+00 1.00000 insignificant 0.04687598 0.72202987 lowCoverage 1.00000 lowCoverage 0.816514 0.35494 0.4521564 5 0.82851 0.43804 0.390477 9.3178e-22 6.6505e-01 hypermethylated 4.6589e-19 1.0000e+00 hypermethylated 1.7744e-05 9.1455e-01 hypermethylated 0.002218 1.0000e+00 hypermethylated 0.425002 2.0966e-03 lowCoverage 0.1613303 lowCoverage 0.816514 0.646341 0.1756603 5 0.82851 0.668011 0.1605039 1.1355e-05 0.9941316 weaklyHypermeth 1.8924e-03 1 weaklyHypermeth 2.8143e-01 0.829851 insignificant 1.0000e+00 1 insignificant 0.0668860 0.6245687 lowCoverage 1.00000 lowCoverage 0.35494 0.646341 -0.238715 5 0.43804 0.668011 -0.229973 8.9639e-01 3.4898e-05 hypomethylated 1.0000e+00 0.0035855 hypomethylated 9.7019e-01 0.00059766 hypomethylated 1.0000e+00 0.10246 insignificant -0.3581160 4.3626e-02 lowCoverage 1.000000 lowCoverage chr10 80652441 80653441 101902 ZMIZ1 ENSG00000108175 0.60745 100 6 0.546920 99 6 0.57675 119 6 0.667659 127 5 0.646641 67 6 0.79240 196 5 0.704952 98 6 0.570435 103 6 0.57127 108 6 0.619042 112 6 0.71882 136 6 0.59979 89 6 0.224043 184 6 0.621615 66 3 0.48737 136 6 0.67027 54 5 0.369073 66 6 0.46267 165 5 0.56786 90 5 0.536593 134 6 0.58390 66 5 0.353983 126 5 0.73819 96 6 0.40926 60 5 0.49954 91 5 0.488889 113 6 0.561041 68 6 0.694940 62 5 0.622475 62 5 0.382423 119 6 0.35860 115 5 0.68882 140 5 0.74865 111 6 0.85880 96 6 0.76852 69 4 0.79773 25 2 0.82431 59 6 0.70983 99 6 0.319411 117 5 0.26727 166 5 0.342625 126 5 0.162351 110 5 0.419939 121 5 0.621959 0.572649 0.64244 0.769841 0.697919 0.78284 0.724890 0.591615 0.624775 0.679245 0.69640 0.689409 0.267118 0.655921 0.562036 0.78829 0.437697 0.509920 0.566762 0.515980 0.818722 0.379605 0.80765 0.470767 0.659992 0.496713 0.585399 0.74063 0.622230 0.429148 0.359476 0.74337 0.75856 0.83306 0.64894 0.746369 0.84774 0.63920 0.377470 0.348747 0.383322 0.211874 0.409918 4 0.589595 0.559928 0.0256879 6 0.620063 0.45402 0.1660399 0.270583 0.9490041 insignificant 1 1 insignificant 0.21520 0.8975174 insignificant 1 1.00000 insignificant 0.0462430 0.352145 insignificant 1 insignificant 0.589230 0.72767 -0.1677001 6 0.556741 0.78434 -0.2276009 9.3986e-01 3.4741e-10 weaklyHypometh 1.0000e+00 1.1580e-07 weaklyHypometh 9.2782e-01 3.1664e-08 weaklyHypometh 1.00000000 1.0555e-05 weaklyHypometh -0.2065577 1.0540e-05 hypomethylated 0.0017566 hypomethylated 0.589230 0.365625 0.2478172 5 0.556741 0.289704 0.2670367 1.9009e-10 1.0000e+00 hypermethylated 9.5046e-08 1.000000 hypermethylated 3.2005e-09 1.00000000 hypermethylated 1.6258e-06 1.00000 hypermethylated 0.27576243 0.00068262 hypermethylated 0.17066 insignificant 0.560430 0.72767 -0.1825980 6 0.52969 0.78434 -0.254647 9.6356e-01 3.1139e-10 weaklyHypometh 1.0000e+00 1.0380e-07 weaklyHypometh 9.3057e-01 9.3191e-06 weaklyHypometh 1.000000 3.1064e-03 weaklyHypometh -0.252801 4.5917e-05 hypomethylated 0.0060947 hypomethylated 0.560430 0.365625 0.2154666 5 0.52969 0.289704 0.2399901 1.1873e-06 0.9999352 hypermethylated 3.9577e-04 1 hypermethylated 6.6795e-06 0.999986 hypermethylated 3.3397e-03 1 hypermethylated 0.2295194 0.0023674 weaklyHypermeth 0.47348 insignificant 0.72767 0.365625 0.365255 5 0.78434 0.289704 0.494638 2.3717e-16 9.9999e-01 hypermethylated 1.1859e-13 1.0000000 hypermethylated 1.8587e-06 0.99999977 hypermethylated 6.1958e-04 1.00000 hypermethylated 0.4823201 5.4243e-05 hypermethylated 0.018081 hypermethylated chr10 80833074 80834074 101908 PPIF ENSG00000108179 0.49723 336 8 0.367246 292 8 0.42137 238 8 0.456192 346 8 0.559384 124 8 0.51137 343 8 0.521092 239 8 0.692153 189 8 0.35471 330 8 0.410422 264 8 0.51412 265 8 0.38096 180 7 0.174938 411 8 0.371533 77 5 0.34700 360 8 0.66493 133 8 0.201517 318 8 0.30262 376 8 0.37196 183 8 0.383801 336 9 0.37213 154 8 0.147437 253 8 0.51746 275 8 0.68044 99 8 0.43936 105 8 0.420517 295 8 0.235000 201 8 0.238537 133 5 0.438237 211 8 0.353559 356 8 0.33718 299 8 0.63446 389 8 0.54790 253 8 0.73319 181 8 0.36728 35 3 0.12467 123 8 0.62146 173 8 0.34713 348 8 0.429675 419 8 0.38171 464 8 0.185290 379 8 0.262529 417 8 0.321681 481 8 0.435996 0.267542 0.39710 0.439379 0.560193 0.48806 0.458192 0.608176 0.346525 0.321547 0.47379 0.419072 0.133234 0.229193 0.247296 0.55411 0.225337 0.301458 0.361432 0.317168 0.468732 0.129387 0.56748 0.657291 0.426502 0.338700 0.246156 0.22097 0.374938 0.267816 0.325006 0.68333 0.54540 0.87932 0.49446 0.135880 0.73517 0.39624 0.246809 0.261080 0.150459 0.230016 0.283804 8 0.373406 0.390975 -0.0222812 8 0.424383 0.35840 0.0659782 0.731369 0.7710605 insignificant 1 1 insignificant 0.31585 0.8820171 insignificant 1 1.00000 insignificant 0.0240356 0.662734 insignificant 1 insignificant 0.374345 0.55436 -0.1785803 8 0.520319 0.43846 0.0818554 9.9957e-01 7.1577e-06 weaklyHypometh 1.0000e+00 6.5070e-04 weaklyHypometh 8.0588e-01 3.9382e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant -0.0317104 7.4853e-01 insignificant 1.0000000 insignificant 0.373406 0.259259 0.1235152 8 0.424383 0.420898 0.0034848 1.1810e-03 9.9655e-01 weaklyHypermeth 6.2159e-02 1.000000 weaklyHypermeth 3.1726e-04 0.99427882 weaklyHypermeth 4.5080e-02 1.00000 weaklyHypermeth 0.10904950 0.06930259 insignificant 1.00000 insignificant 0.390975 0.55736 -0.1593878 8 0.35840 0.52616 -0.167752 9.9822e-01 1.1382e-03 weaklyHypometh 1.0000e+00 1.0347e-01 insignificant 9.8589e-01 5.4449e-02 insignificant 1.000000 1.0000e+00 insignificant -0.055746 5.9584e-01 insignificant 1.0000000 insignificant 0.390975 0.259259 0.1444916 8 0.35840 0.420898 -0.0624934 1.4748e-02 0.9846751 weaklyHypermeth 5.3323e-01 1 insignificant 7.5103e-03 0.903694 weaklyHypermeth 5.3645e-01 1 insignificant 0.0850139 0.2000323 insignificant 1.00000 insignificant 0.55736 0.259259 0.302881 8 0.52616 0.420898 0.105258 1.4386e-05 9.9946e-01 hypermethylated 1.1989e-03 1.0000000 hypermethylated 1.7490e-02 0.98092513 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.1407599 2.0014e-01 insignificant 1.000000 insignificant chr10 82272195 82273195 101933 TSPAN14 ENSG00000108219 0.88333 46 4 0.883314 124 5 0.77976 47 4 0.401961 22 1 0.708333 64 3 0.86536 94 5 0.575000 37 3 0.928562 129 5 0.95333 73 3 0.943548 85 5 0.88363 138 5 0.86111 31 3 0.906896 139 5 NA 0 0 0.93824 67 3 0.15000 8 1 0.679365 64 5 0.80833 32 2 0.94185 101 4 0.944444 63 5 0.88000 37 5 0.923077 19 1 0.86556 71 5 0.97333 42 4 1.00000 9 1 0.987870 163 4 0.914474 63 4 0.550000 16 1 0.945000 135 4 0.965130 185 5 0.95374 192 6 0.90395 96 5 0.78397 106 5 0.60770 142 4 1.00000 100 2 0.76667 20 3 0.66905 35 4 0.90988 137 5 0.855556 24 2 1.00000 34 2 0.958333 10 1 1.000000 16 1 0.885714 27 2 0.893827 0.881539 0.83333 0.611200 0.713735 0.86725 0.620370 0.950231 0.977778 0.945042 0.91758 0.749225 0.914122 NA 0.953704 0.33333 0.656175 0.694444 0.961587 0.938272 0.866667 0.931624 0.87181 0.925926 0.964079 0.973118 0.918860 0.54321 0.943519 0.961387 0.980333 0.95959 0.81377 0.59365 0.90370 0.765432 0.70106 0.92940 0.862963 1.000000 0.972222 1.000000 0.725926 0 0.895161 0.943580 -0.0488717 5 0.854753 0.94961 -0.0948555 0.999952 0.0382434 weaklyHypometh 1 1 insignificant 0.99996 0.0111660 weaklyHypometh 1 1.00000 insignificant -0.1137896 0.066896 lowCoverage 1 lowCoverage 0.896707 0.90000 0.0133405 5 0.865861 0.85238 0.0134823 1.7660e-01 3.6138e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1506e-01 3.1528e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0018435 9.8131e-01 lowCoverage 1.0000000 lowCoverage 0.896707 0.918182 -0.0496214 1 0.865861 0.920303 -0.0544417 9.0306e-01 2.6165e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9980e-01 0.01135566 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.14853257 0.01673829 lowCoverage 1.00000 lowCoverage 0.943470 0.90000 0.0604313 5 0.93281 0.85238 0.080433 1.3681e-02 8.6462e-01 weaklyHypermeth 3.5079e-01 1.0000e+00 insignificant 1.1672e-01 8.9238e-01 insignificant 1.000000 1.0000e+00 insignificant 0.115633 1.2990e-01 lowCoverage 1.0000000 lowCoverage 0.943470 0.918182 -0.0038516 1 0.93281 0.920303 0.0125085 3.5167e-01 0.4392045 lowCoverage 1.0000e+00 1 lowCoverage 9.5661e-01 0.299909 lowCoverage 1.0000e+00 1 lowCoverage -0.0347430 0.4582702 lowCoverage 1.00000 lowCoverage 0.90000 0.918182 -0.121623 1 0.85238 0.920303 -0.067924 8.1250e-01 1.6265e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.9491e-01 0.04009411 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1503761 5.7553e-02 lowCoverage 1.000000 lowCoverage chr10 84418765 84419765 102017 ENSG00000207275 0.758382 314 10 0.521822 179 9 0.652053 166 10 0.762401 221 10 0.685351 71 5 0.654209 348 10 0.557574 153 10 0.787987 165 9 0.68643 104 8 0.690202 124 10 0.686731 287 10 0.5997835 82 9 0.76486 141 10 0.683333 36 6 0.824536 129 10 0.9080237 73 5 0.61470 64 5 0.640290 194 10 0.641434 155 10 0.730219 349 10 0.623951 100 8 0.704458 171 10 0.720647 226 10 0.743759 112 8 0.7326548 102 6 0.685420 181 10 0.732316 272 8 0.818284 71 7 0.733208 115 10 0.76029 215 10 0.63649 152 8 0.682231 416 10 0.602714 153 10 0.612471 144 10 0.606508 176 10 0.556818 61 5 0.668298 125 9 0.6400698 193 10 0.723358 316 10 0.707574 268 10 0.748400 197 10 0.778969 229 10 0.69784 277 10 0.788604 0.667773 0.632681 0.7781716 0.6476177 0.739125 0.687427 0.793125 0.688440 0.755135 0.757207 0.6700878 0.74459 0.79077 0.826442 0.776636 0.67984 0.709354 0.740069 0.726267 0.692035 0.712940 0.744835 0.715906 0.742764 0.717760 0.783521 0.774579 0.758690 0.759159 0.7344948 0.777655 0.6426320 0.6235700 0.6928661 0.54277 0.623228 0.7129676 0.747582 0.781153 0.7708285 0.749497 0.831688 6 0.743964 0.721050 0.0036830 10 0.697868 0.739922 -0.0420547 0.877208 0.7820195 insignificant 1 1 insignificant 0.997901 0.535679 insignificant 1 1 insignificant -0.02195897 0.3976472 insignificant 1 insignificant 0.744172 0.660798 0.0838299 10 0.691779 0.643868 0.0479115 5.5282e-05 0.998594 weaklyHypermeth 1.2564e-03 1 weaklyHypermeth 8.9836e-04 0.998838 weaklyHypermeth 2.8074e-02 1 weaklyHypermeth 0.0780364 0.00610939 weaklyHypermeth 0.15993 insignificant 0.743881 0.781663 -0.0370383 10 0.677027 0.709975 -0.0329482 9.8276e-01 0.13409327 insignificant 1.0000e+00 1.000000 insignificant 9.9484e-01 0.2312903 insignificant 1.0000e+00 1.00000 insignificant -0.0387127 1.4077e-01 insignificant 1.0000000 insignificant 0.720941 0.660798 0.080578 10 0.723514 0.643868 0.07964658 8.3478e-05 0.999994 weaklyHypermeth 1.9876e-03 1 weaklyHypermeth 8.5523e-05 1.00000 weaklyHypermeth 4.2761e-03 1 weaklyHypermeth 0.099995 4.2788e-04 weaklyHypermeth 0.0241963 weaklyHypermeth 0.720865 0.781663 -0.0427147 10 0.719141 0.709975 0.00916627 9.6685e-01 0.027382 weaklyHypometh 1.0000e+00 1 insignificant 9.6679e-01 0.24956 insignificant 1.0000e+00 1 insignificant -0.0167537 4.4502e-01 insignificant 1.0000000 insignificant 0.660798 0.781323 -0.122694 10 0.643868 0.685806 -0.041939 9.9822e-01 3.4719e-06 weaklyHypometh 1.0000000 3.1563e-04 weaklyHypometh 0.99965826 0.00013805 weaklyHypometh 1.000000 0.025505 weaklyHypometh -0.116749 0.00038906 weaklyHypometh 0.043228 weaklyHypometh chr10 86339858 86340858 102063 RPS3AP5 ENSG00000178429 0.870247 91 6 0.708844 90 5 0.895171 74 5 0.903839 94 6 0.832126 40 2 0.818914 68 3 0.878571 82 5 0.979167 55 5 0.96471 73 2 0.654321 43 2 0.971644 163 6 0.9349282 44 2 0.97212 62 2 NA 0 0 0.981982 59 2 0.9580420 48 2 0.91806 49 2 0.958333 19 2 0.884921 48 2 0.801190 77 3 0.931624 29 2 1.000000 15 2 0.851103 50 2 0.983333 49 5 0.6000000 9 0 0.915556 139 6 0.748485 29 2 0.866667 22 2 0.882591 32 2 0.91833 132 6 0.94660 131 6 0.974119 93 6 0.493189 64 2 0.162646 53 2 0.600000 141 3 0.607143 11 1 0.460913 62 5 0.4700000 68 4 0.635582 69 5 0.778884 140 6 0.828448 111 6 0.887097 37 2 0.60222 179 6 0.955062 0.782684 0.831576 0.8701299 0.9051383 0.935108 0.888312 0.943182 0.919786 0.979798 0.954545 0.8273162 0.92690 NA 0.941032 0.958360 0.91760 0.931818 0.826840 0.904545 0.783217 1.000000 0.788436 0.954545 1.000000 0.909091 0.874656 0.818182 0.878911 0.886364 0.9125740 0.918330 0.4730059 0.4700957 0.3230070 0.61688 0.680519 0.7418182 0.878788 0.760113 0.6931818 0.876833 0.842857 2 0.904389 0.913699 -0.0033841 5 0.900582 0.923049 -0.0224670 0.859299 0.3513453 insignificant 1 1 insignificant 0.909038 0.381499 insignificant 1 1 insignificant 0.00392821 0.9204630 lowCoverage 1 lowCoverage 0.902973 0.686717 0.2574221 5 0.771927 0.534326 0.2376006 2.4688e-13 0.999997 hypermethylated 1.8991e-11 1 hypermethylated 1.3086e-07 1.000000 hypermethylated 2.1810e-05 1 hypermethylated 0.4231477 0.00084714 lowCoverage 0.04034 lowCoverage 0.902973 0.757463 0.1220569 5 0.771927 0.650517 0.1214102 3.3234e-05 0.99999994 weaklyHypermeth 2.3738e-03 1.000000 weaklyHypermeth 1.0648e-04 1.0000000 weaklyHypermeth 1.0648e-02 1.00000 weaklyHypermeth 0.1423498 5.8324e-02 lowCoverage 1.0000000 lowCoverage 0.913699 0.688442 0.247595 5 0.923049 0.623381 0.29966776 9.2625e-11 0.999980 hypermethylated 6.6161e-09 1 hypermethylated 6.6937e-07 1.00000 hypermethylated 1.1156e-04 1 hypermethylated 0.419219 5.6850e-04 lowCoverage 0.0257156 lowCoverage 0.913699 0.758879 0.1394690 5 0.923049 0.758936 0.16411228 6.8744e-06 0.999994 weaklyHypermeth 5.7287e-04 1 weaklyHypermeth 5.5891e-05 0.99998 weaklyHypermeth 9.3152e-03 1 weaklyHypermeth 0.1384216 6.7394e-02 lowCoverage 1.0000000 lowCoverage 0.686717 0.757463 -0.089567 5 0.534326 0.650517 -0.116190 9.4210e-01 4.4740e-03 weaklyHypometh 1.0000000 1.3159e-01 insignificant 0.99991039 0.00444533 weaklyHypometh 1.000000 0.193275 insignificant -0.280798 0.00979419 lowCoverage 0.349793 lowCoverage chr10 87362345 87363345 102114 GRID1 ENSG00000182771 0.911915 295 6 0.952179 215 7 0.872096 102 7 0.872505 314 6 0.797940 91 7 0.902305 369 7 0.772955 165 7 0.884470 126 7 0.92088 76 7 0.946429 88 6 0.902565 321 7 0.8231293 43 3 0.89722 112 7 0.775196 72 6 0.788062 109 6 0.6567460 33 2 0.91591 1331 2 0.934762 377 6 0.961534 176 6 0.894759 257 7 0.901503 104 7 0.900253 101 6 0.816846 124 6 0.933524 93 6 0.8130560 74 5 0.933458 325 7 0.842326 101 6 0.935220 73 5 0.965700 216 6 0.97162 345 7 0.91393 397 7 0.907675 293 7 0.764357 207 7 0.579714 160 6 0.741429 305 7 0.398551 29 1 0.711956 294 7 0.7788728 341 7 0.948738 366 7 0.827248 303 6 0.964583 263 6 0.929672 344 6 0.88801 242 7 0.908882 0.947632 0.907042 0.9243009 0.9351445 0.890086 0.866199 0.910975 0.902553 0.904971 0.928526 0.8598548 0.89001 0.91628 0.921108 0.614904 0.89275 0.924544 0.961913 0.911160 0.937590 0.914116 0.937864 0.970040 0.950329 0.937851 0.833831 0.965259 0.965403 0.971174 0.9337196 0.933169 0.7204934 0.6616306 0.8248744 0.57394 0.723614 0.8903623 0.944019 0.962678 0.9619975 0.921349 0.920021 3 0.937393 0.939840 -0.0167370 7 0.905952 0.919369 -0.0134162 0.810218 0.0442165 weaklyHypometh 1 1 insignificant 0.968639 0.048119 weaklyHypometh 1 1 insignificant -0.03374853 0.1540705 insignificant 1 insignificant 0.937393 0.776444 0.1606201 7 0.905952 0.727809 0.1781437 3.4453e-12 0.999467 weaklyHypermeth 1.9140e-10 1 weaklyHypermeth 2.6707e-06 0.999998 weaklyHypermeth 2.0074e-04 1 weaklyHypermeth 0.2066982 0.01716527 weaklyHypermeth 0.36522 insignificant 0.936202 0.947299 -0.0311485 6 0.810565 0.879174 -0.0686088 9.9632e-01 0.05825580 insignificant 1.0000e+00 1.000000 insignificant 9.9896e-01 0.0789139 insignificant 1.0000e+00 1.00000 insignificant -0.0424723 1.9428e-01 insignificant 1.0000000 insignificant 0.939003 0.776946 0.170023 7 0.804448 0.761833 0.04261492 2.3386e-08 1.000000 weaklyHypermeth 1.0630e-06 1 weaklyHypermeth 1.5814e-05 0.99920 weaklyHypermeth 1.2651e-03 1 weaklyHypermeth 0.240447 9.3329e-03 weaklyHypermeth 0.2121105 insignificant 0.939840 0.947889 -0.0073128 6 0.919369 0.933342 -0.01397340 8.5992e-01 0.521557 insignificant 1.0000e+00 1 insignificant 8.4538e-01 0.66929 insignificant 1.0000e+00 1 insignificant -0.0087238 7.7226e-01 insignificant 1.0000000 insignificant 0.776444 0.947889 -0.134573 6 0.727809 0.933342 -0.205533 1.0000e+00 9.0332e-05 weaklyHypometh 1.0000000 6.0222e-03 weaklyHypometh 0.99999867 0.00047957 weaklyHypometh 1.000000 0.051974 weaklyHypometh -0.249170 0.00731153 weaklyHypometh 0.281213 insignificant chr10 88965356 88966356 102187 ENSG00000210606 0.857188 200 7 0.880289 66 7 0.935714 40 6 0.958487 178 7 0.750000 12 0 0.956934 155 7 0.969841 32 2 0.943878 63 7 0.91248 48 3 0.935714 35 3 0.916607 107 7 0.7857143 13 0 0.94841 57 3 NA 0 0 0.841991 38 2 0.9523810 29 4 0.85238 25 1 0.906298 130 7 0.970068 66 7 0.959482 137 7 0.959184 53 5 0.955511 86 7 0.937290 151 7 0.819866 62 7 0.9576138 94 7 0.913605 61 7 0.842652 113 7 0.444444 9 0 0.887755 31 3 0.96429 41 3 0.94620 53 7 0.914281 247 7 0.930556 59 7 0.896395 86 7 0.952381 19 0 0.846886 46 3 0.533333 17 2 0.9150660 54 3 0.992063 115 7 0.973516 115 7 0.967222 129 7 0.915647 163 7 0.88517 197 7 0.865570 0.836519 0.926449 0.9630357 0.6123188 0.945345 0.952657 0.912526 0.901935 0.934783 0.921162 0.8188406 0.92077 NA 0.806544 0.927536 0.77053 0.896129 0.953485 0.954166 0.937888 0.944509 0.933523 0.808699 0.955566 0.913389 0.864893 0.614263 0.829193 0.942029 0.9181254 0.900867 0.8927134 0.8610457 0.9275362 0.81420 0.633333 0.9025088 0.995169 0.968696 0.9569860 0.906011 0.874416 0 0.916841 0.909091 0.0086010 7 0.919777 0.910758 0.0090186 0.418348 0.8020038 insignificant 1 1 insignificant 0.376324 0.882856 insignificant 1 1 insignificant 0.02848818 0.5298038 lowCoverage 1 lowCoverage 0.916841 0.854093 0.0576639 3 0.919777 0.884635 0.0351418 4.9010e-02 0.291690 lowCoverage 6.2039e-01 1 lowCoverage 5.8114e-01 0.392343 lowCoverage 1.0000e+00 1 lowCoverage 0.0612757 0.39062649 lowCoverage 1.00000 lowCoverage 0.916841 0.938804 -0.0209486 7 0.919777 0.939847 -0.0200707 9.4321e-01 0.22394451 insignificant 1.0000e+00 1.000000 insignificant 3.3813e-01 0.3300693 insignificant 1.0000e+00 1.00000 insignificant -0.0396789 1.4302e-01 lowCoverage 1.0000000 lowCoverage 0.909091 0.854093 0.051537 3 0.910758 0.884635 0.02612322 1.7363e-01 0.097227 lowCoverage 1.0000e+00 1 lowCoverage 5.7934e-01 0.30469 lowCoverage 1.0000e+00 1 lowCoverage 0.032788 6.7809e-01 lowCoverage 1.0000000 lowCoverage 0.909091 0.938804 -0.0297649 7 0.910758 0.939847 -0.02908933 9.8672e-01 0.151934 insignificant 1.0000e+00 1 insignificant 8.1349e-01 0.30604 insignificant 1.0000e+00 1 insignificant -0.0681671 1.6182e-01 insignificant 1.0000000 insignificant 0.854093 0.938804 -0.080724 3 0.884635 0.939847 -0.055213 1.8272e-01 1.2628e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.23503924 0.33973255 lowCoverage 1.000000 1.000000 lowCoverage -0.100955 0.18415241 lowCoverage 1.000000 lowCoverage chr10 94930480 94931480 102420 ENSG00000218488 0.749390 198 5 0.863097 315 6 0.916345 125 6 0.899880 177 6 0.884314 84 6 0.966008 261 4 0.930846 124 6 0.882692 185 6 0.88519 96 4 0.946881 101 3 0.898759 303 6 0.8194444 29 3 0.95678 128 3 0.774791 88 3 0.957895 162 3 0.7183333 58 3 1.00000 10 0 0.516924 189 3 0.871894 174 3 0.955648 259 3 0.950521 63 3 0.809804 54 3 0.695472 149 3 0.844792 117 5 0.7968254 78 6 0.859406 249 6 0.894305 193 5 0.819320 71 3 0.883299 137 3 0.89826 240 6 0.57078 236 6 0.967509 219 3 0.216841 203 5 0.212462 80 4 0.445233 386 6 0.035714 41 3 0.366335 259 6 0.0308834 258 6 0.879894 273 6 0.875633 201 6 0.732767 177 6 0.580966 115 3 0.84032 226 6 0.878653 0.919782 0.867585 0.9066535 0.8783333 0.919427 0.913489 0.874765 0.890586 0.947344 0.888799 0.9259259 0.92750 0.88262 0.913889 0.633125 1.00000 0.760159 0.965907 0.926123 0.979167 0.811078 0.846685 0.975000 0.981481 0.906544 0.876125 0.849688 0.892591 0.897339 0.9102020 0.933696 0.0570861 0.1443516 0.1608466 0.00000 0.061030 0.0065217 0.942566 0.927614 0.8796360 0.772443 0.838251 3 0.890701 0.894678 -0.0049838 4 0.876727 0.786058 0.0906697 0.386790 0.9095842 lowCoverage 1 1 lowCoverage 0.565935 0.667609 lowCoverage 1 1 lowCoverage 0.03723007 0.3658348 lowCoverage 1 lowCoverage 0.890630 0.116544 0.7566955 5 0.861318 0.295831 0.5654872 9.1654e-46 1.000000 hypermethylated 9.1654e-43 1 hypermethylated 4.3328e-11 1.000000 hypermethylated 4.3328e-08 1 hypermethylated 0.6518436 0.00007904 lowCoverage 0.00608 lowCoverage 0.890594 0.867944 0.0187713 5 0.841507 0.732907 0.1085991 1.0680e-01 0.98872381 insignificant 1.0000e+00 1.000000 insignificant 6.6535e-02 0.9980248 insignificant 1.0000e+00 1.00000 insignificant 0.0878388 2.0971e-01 lowCoverage 1.0000000 lowCoverage 0.895822 0.116639 0.781104 4 0.817788 0.338093 0.47969574 6.4010e-38 0.999988 lowCoverage 6.4010e-35 1 lowCoverage 2.8227e-10 1.00000 lowCoverage 1.4113e-07 1 lowCoverage 0.614614 7.0917e-05 lowCoverage 0.0070917 lowCoverage 0.895822 0.867944 0.0253487 4 0.817788 0.732907 0.08488094 2.7712e-01 0.948136 lowCoverage 1.0000e+00 1 lowCoverage 9.5521e-02 0.99775 lowCoverage 1.0000e+00 1 lowCoverage 0.0506087 4.6363e-01 lowCoverage 1.0000000 lowCoverage 0.116639 0.867944 -0.739988 6 0.338093 0.732907 -0.394815 9.8493e-01 1.1598e-17 hypomethylated 1.0000000 1.1598e-14 hypomethylated 0.99951337 0.00000455 hypomethylated 1.000000 0.004550 hypomethylated -0.564005 0.00014106 hypomethylated 0.023659 hypomethylated chr10 97283142 97284142 102494 SORBS1 ENSG00000095637 0.718293 326 10 0.649881 163 9 0.737837 138 6 0.670871 227 9 0.722667 105 6 0.703486 548 10 0.685603 128 6 0.779533 106 6 0.79770 113 6 0.673416 113 7 0.757984 301 10 0.8208514 125 6 0.84254 147 9 NA 0 0 0.730731 127 7 0.7006173 88 5 0.71347 96 5 0.831144 202 9 0.748889 195 10 0.724492 421 10 0.665710 101 9 0.605331 120 8 0.758657 205 10 0.793922 110 8 0.7686147 85 8 0.700894 220 10 0.698627 154 10 0.754416 91 6 0.716250 104 6 0.64863 237 10 0.67104 198 10 0.690110 595 10 0.590141 200 7 0.669518 148 9 0.596712 205 8 0.599675 63 6 0.707790 128 10 0.6781344 183 10 0.753781 243 10 0.754422 331 10 0.751698 190 9 0.753120 161 9 0.76337 249 9 0.756021 0.699461 0.739656 0.7055126 0.7530374 0.732289 0.768045 0.778776 0.772275 0.818182 0.784866 0.7991771 0.78809 NA 0.715320 0.770152 0.77854 0.747329 0.754320 0.762072 0.740437 0.745389 0.744975 0.728772 0.657617 0.740475 0.788609 0.807587 0.721332 0.740699 0.7504951 0.702621 0.6873970 0.6331728 0.7282438 0.57487 0.713660 0.6982128 0.838234 0.744406 0.7410211 0.698143 0.719565 5 0.754974 0.729730 0.0278849 10 0.730400 0.693521 0.0368785 0.046726 0.9979575 weaklyHypermeth 1 1 insignificant 0.124604 0.954254 insignificant 1 1 insignificant 0.03135215 0.1374767 insignificant 1 insignificant 0.754980 0.667745 0.0781611 10 0.728439 0.649020 0.0794192 1.4713e-06 0.999975 weaklyHypermeth 4.2037e-05 1 weaklyHypermeth 2.0798e-04 0.999984 weaklyHypermeth 7.9994e-03 1 weaklyHypermeth 0.0970405 0.00308843 weaklyHypermeth 0.09848 weaklyHypermeth 0.754980 0.763203 0.0015319 9 0.728439 0.744494 -0.0160542 7.1006e-01 0.27289440 insignificant 1.0000e+00 1.000000 insignificant 4.9879e-01 0.3000938 insignificant 1.0000e+00 1.00000 insignificant -0.0179096 1.8141e-01 insignificant 1.0000000 insignificant 0.730023 0.667745 0.050659 10 0.702873 0.649020 0.05385284 3.0122e-03 0.995790 weaklyHypermeth 5.3789e-02 1 weaklyHypermeth 6.8390e-03 0.99891 weaklyHypermeth 1.4867e-01 1 insignificant 0.065688 2.9043e-02 weaklyHypermeth 0.5585134 insignificant 0.730023 0.763203 -0.0284891 9 0.702873 0.744494 -0.04162056 9.6534e-01 0.048554 weaklyHypometh 1.0000e+00 1 insignificant 9.0600e-01 0.12792 insignificant 1.0000e+00 1 insignificant -0.0492617 1.0338e-02 weaklyHypometh 0.5743205 insignificant 0.667745 0.763203 -0.074240 9 0.649020 0.744494 -0.095473 9.9941e-01 1.0288e-04 weaklyHypometh 1.0000000 6.4298e-03 weaklyHypometh 0.99723469 0.00213190 weaklyHypometh 1.000000 0.108225 insignificant -0.114950 0.00252221 weaklyHypometh 0.141520 insignificant chr10 98870397 98871397 102562 C10orf12 ENSG00000155640 0.966667 74 4 0.749184 212 3 0.883442 52 3 0.924490 243 5 0.962963 81 3 0.935683 166 3 0.803943 92 3 0.930872 130 3 0.92690 55 3 1.000000 66 3 0.903846 156 3 0.8333333 22 3 0.98333 58 3 0.948718 39 3 0.946528 92 3 NA 0 0 NA 0 0 0.963634 256 3 0.970328 184 3 0.872859 210 5 0.888889 9 0 0.848485 33 3 0.975000 73 3 0.977778 42 3 0.9103853 290 3 0.828484 244 5 0.681260 90 3 0.944444 18 3 0.924084 224 3 0.97968 222 5 0.77862 194 4 0.885459 174 5 0.800067 95 3 0.900182 181 3 0.755191 533 5 0.734048 204 5 0.866013 52 3 0.7810516 226 5 0.923214 105 4 0.936624 240 5 0.919043 317 5 0.936605 225 5 0.91734 260 5 0.929170 0.769020 0.883704 0.9285434 0.9540598 0.911760 0.812903 0.937149 0.936038 1.000000 0.913092 0.7932692 0.97933 0.93639 0.941687 NA NA 0.951002 0.954422 0.954985 0.942308 0.833916 0.948317 0.988462 0.914147 0.936812 0.656150 0.971154 0.925066 0.948146 0.9509635 0.925493 0.7985325 0.9162516 1.0000000 0.70168 0.876225 0.9339658 0.937597 0.943710 0.8914239 0.914232 0.942232 2 0.909963 0.916045 -0.0063886 3 0.912686 0.919472 -0.0067861 0.840095 0.4857362 lowCoverage 1 1 lowCoverage 0.764041 0.616704 lowCoverage 1 1 lowCoverage 0.03182669 0.3063742 lowCoverage 1 lowCoverage 0.909963 0.780015 0.0279678 3 0.912686 0.736547 0.1761394 1.8765e-03 0.983016 lowCoverage 3.4118e-02 1 lowCoverage 1.3690e-03 0.998730 lowCoverage 3.8026e-02 1 lowCoverage 0.1109482 0.00579843 lowCoverage 0.15671 lowCoverage 0.909963 0.917976 -0.0073818 3 0.912686 0.918143 -0.0054572 7.1974e-01 0.64384168 lowCoverage 1.0000e+00 1.000000 lowCoverage 1.0743e-01 0.9649075 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0095255 5.6287e-01 lowCoverage 1.0000000 lowCoverage 0.916045 0.780015 0.034901 3 0.919472 0.736547 0.18292553 1.5966e-03 0.988150 lowCoverage 3.1932e-02 1 lowCoverage 6.6929e-03 0.99880 lowCoverage 1.4867e-01 1 lowCoverage 0.079121 5.1165e-02 lowCoverage 0.9136626 lowCoverage 0.916149 0.918047 -0.0010293 3 0.932893 0.931786 0.00110745 6.6955e-01 0.862854 lowCoverage 1.0000e+00 1 lowCoverage 4.3632e-01 0.98114 lowCoverage 1.0000e+00 1 lowCoverage -0.0413522 1.4239e-01 lowCoverage 1.0000000 lowCoverage 0.780015 0.917976 -0.108214 5 0.736547 0.918143 -0.181597 9.8559e-01 1.2599e-03 weaklyHypometh 1.0000000 4.3445e-02 weaklyHypometh 0.99636167 0.01164978 weaklyHypometh 1.000000 0.409056 insignificant -0.120474 0.00563223 lowCoverage 0.244880 lowCoverage chr10 98883588 98884588 102564 C10orf12 ENSG00000155640 0.787590 147 5 0.685921 128 5 0.850000 76 5 0.778313 201 5 0.794444 32 5 0.799596 179 6 0.888636 44 5 0.724963 205 5 0.87252 87 5 0.867407 80 5 0.755993 242 5 0.7927350 43 3 0.84392 198 5 0.877149 78 5 0.705901 162 5 0.7407407 34 3 0.83333 6 0 0.639363 212 5 0.878381 244 5 0.715000 146 5 0.737103 36 5 0.547941 142 5 0.734623 84 5 0.603244 122 5 0.8970588 69 5 0.774745 259 5 0.857181 145 5 0.722222 60 5 0.791307 126 5 0.74606 307 5 0.75862 189 5 0.864184 195 5 0.701037 139 5 0.765000 92 5 0.373737 139 5 0.800000 7 0 0.677600 107 6 0.8768971 192 5 0.265269 295 5 0.514252 169 5 0.444359 188 5 0.438635 156 5 0.58111 173 5 0.781642 0.684902 0.862968 0.7767785 0.9169340 0.790169 0.898153 0.860653 0.846420 0.844913 0.918751 0.9395996 0.81734 0.84388 0.721097 0.866310 0.81184 0.651190 0.860479 0.722100 0.789916 0.449401 0.879403 0.723081 0.971689 0.727702 0.810251 0.833252 0.804710 0.769004 0.7835429 0.835812 0.7769618 0.7471034 0.2761303 0.74866 0.756405 0.8632541 0.280959 0.508938 0.4482380 0.464223 0.593254 5 0.800314 0.764706 0.0377219 5 0.770285 0.735989 0.0342961 0.130424 0.9840635 insignificant 1 1 insignificant 0.086981 0.976835 insignificant 1 1 insignificant 0.03873722 0.2608513 lowCoverage 1 lowCoverage 0.800314 0.656805 0.1398088 5 0.770285 0.632915 0.1373699 2.4961e-03 0.881466 weaklyHypermeth 4.3792e-02 1 weaklyHypermeth 2.1773e-01 0.796163 insignificant 1.0000e+00 1 insignificant 0.0925497 0.25632373 lowCoverage 1.00000 lowCoverage 0.801906 0.442406 0.3610971 5 0.796342 0.428986 0.3673564 3.0170e-23 1.00000000 hypermethylated 3.0170e-20 1.000000 hypermethylated 2.1556e-11 1.0000000 hypermethylated 2.1556e-08 1.00000 hypermethylated 0.3428706 1.8403e-03 lowCoverage 0.2134141 lowCoverage 0.764706 0.656805 0.103087 5 0.735989 0.632915 0.10307372 6.4454e-02 0.744727 insignificant 8.3706e-01 1 insignificant 4.5477e-01 0.63053 insignificant 1.0000e+00 1 insignificant 0.053812 5.0814e-01 lowCoverage 1.0000000 lowCoverage 0.766492 0.442406 0.3198149 5 0.759377 0.428986 0.33039151 6.4274e-13 1.000000 hypermethylated 3.2137e-10 1 hypermethylated 1.0624e-08 1.00000 hypermethylated 1.0624e-05 1 hypermethylated 0.3041334 1.7719e-03 weaklyHypermeth 0.2953102 insignificant 0.666159 0.442406 0.219993 5 0.689498 0.428986 0.260513 6.6815e-06 9.8771e-01 hypermethylated 0.0011136 1.0000e+00 hypermethylated 0.00014068 0.99995786 hypermethylated 0.046892 1.000000 hypermethylated 0.250321 0.02058768 lowCoverage 0.571880 lowCoverage chr10 99787535 99788535 102617 CRTAC1 ENSG00000095713 0.125000 33 4 0.205253 118 5 0.390000 80 5 0.250000 4 0 0.295639 114 5 0.351667 27 3 0.368994 89 5 0.187602 99 5 0.31199 75 5 0.347003 49 5 0.386631 195 5 0.3628863 114 5 0.11355 127 5 NA 0 0 0.208547 145 5 0.3805195 86 5 0.27652 121 5 0.166667 12 0 0.136033 139 5 0.133333 44 5 0.291667 46 5 NA 0 0 0.306536 71 5 0.233333 26 2 0.3750000 7 0 0.253287 122 5 0.458333 10 0 0.395238 24 2 0.219503 65 5 0.16475 173 5 0.22967 111 5 0.444444 36 4 0.122222 58 5 0.020690 116 5 0.385714 59 5 0.000000 6 0 0.400000 13 0 0.0095238 84 5 0.100000 40 5 0.100000 8 0 0.000000 4 0 0.000000 4 0 0.05000 16 0 0.089286 0.191727 0.388095 0.0571787 0.2653061 0.365079 0.377860 0.193379 0.292258 0.356976 0.372667 0.3253056 0.14262 NA 0.218254 0.282004 0.30410 0.158730 0.123662 0.158730 0.325397 NA 0.261749 0.218254 0.323619 0.277190 0.460317 0.318594 0.220043 0.179891 0.2687075 0.555556 0.1148904 0.0246305 0.4387755 0.00000 0.380952 0.0113379 0.119048 0.119048 0.0000000 0.000000 0.059524 0 0.271095 0.261939 0.0058391 5 0.270339 0.256217 0.0141219 0.465974 0.5799525 insignificant 1 1 insignificant 0.816726 0.357632 insignificant 1 1 insignificant -0.04347967 0.2591697 lowCoverage 1 lowCoverage 0.271095 0.125000 0.1461960 5 0.270339 0.111730 0.1586091 3.9797e-06 0.997418 weaklyHypermeth 1.0756e-04 1 weaklyHypermeth 1.8247e-03 0.999637 weaklyHypermeth 4.8047e-02 1 weaklyHypermeth 0.1066853 0.23285720 lowCoverage 1.00000 lowCoverage 0.271095 0.083333 0.1870240 0 0.270339 0.073737 0.1966016 1.5160e-08 0.99999997 noCoverage 2.1657e-06 1.000000 noCoverage 3.8112e-07 1.0000000 noCoverage 1.2704e-04 1.00000 noCoverage 0.2130437 1.3015e-05 lowCoverage 0.0065073 lowCoverage 0.261939 0.125000 0.138685 5 0.256217 0.111730 0.14448728 3.6001e-04 0.998394 weaklyHypermeth 7.8264e-03 1 weaklyHypermeth 7.6610e-04 0.99975 weaklyHypermeth 2.5537e-02 1 weaklyHypermeth 0.150165 1.1443e-01 lowCoverage 1.0000000 lowCoverage 0.261939 0.083333 0.1837980 0 0.256217 0.073737 0.18247975 1.3945e-06 0.999999 noCoverage 1.3945e-04 1 noCoverage 7.5162e-07 1.00000 noCoverage 2.3158e-04 1 noCoverage 0.2565233 8.4062e-06 lowCoverage 0.0084062 lowCoverage 0.125000 0.083333 0.041226 0 0.111730 0.073737 0.037992 3.4887e-01 6.3852e-01 noCoverage 1.0000000 1.0000e+00 noCoverage 0.05812775 0.99013189 noCoverage 1.000000 1.000000 noCoverage 0.106358 0.23393734 lowCoverage 1.000000 lowCoverage chr10 100935330 100936330 102757 ENSG00000216394 0.853354 782 6 0.851052 481 6 0.866717 1028 6 0.895894 402 6 0.827393 531 6 0.840786 1989 6 0.863524 435 6 0.814231 244 6 0.91295 242 6 0.874058 340 6 0.885909 709 6 0.8674263 742 6 0.87455 338 6 NA 0 0 0.817272 348 6 0.8729079 712 6 0.92731 713 6 0.869651 476 6 0.885913 636 6 0.826104 2110 6 0.931092 629 6 0.865086 1377 6 0.890744 864 6 0.858335 549 6 0.8552925 859 6 0.912226 845 6 0.891719 533 4 0.867920 984 6 0.869059 345 6 0.89055 1020 6 0.91053 794 6 0.894612 2811 6 0.890184 193 6 0.787288 286 6 0.867275 867 6 0.855818 1054 6 0.726486 537 6 0.8918383 994 6 0.889194 683 6 0.905036 530 6 0.867218 405 6 0.853665 837 6 0.93654 858 6 0.905762 0.912047 0.917287 0.9470377 0.9523286 0.897567 0.917304 0.912054 0.948326 0.945435 0.924263 0.9305193 0.91599 NA 0.896100 0.922972 0.94022 0.899962 0.947420 0.906029 0.966739 0.908786 0.947120 0.866942 0.932511 0.926349 0.895638 0.946362 0.937317 0.940612 0.9417276 0.946052 0.9249191 0.8599039 0.9187865 0.91963 0.878516 0.9264448 0.953453 0.955326 0.9424434 0.938422 0.955215 6 0.919369 0.937812 -0.0155088 6 0.861756 0.890803 -0.0290471 0.999235 0.0028442 weaklyHypometh 1 1 insignificant 0.958064 0.022024 weaklyHypometh 1 1 insignificant -0.02185102 0.0347628 weaklyHypometh 1 insignificant 0.919369 0.912999 0.0063031 6 0.861756 0.850113 0.0116424 3.4761e-02 0.494683 weaklyHypermeth 4.6349e-01 1 insignificant 2.4587e-02 0.640130 weaklyHypermeth 4.5531e-01 1 insignificant 0.0280978 0.35401319 insignificant 1.00000 insignificant 0.919369 0.943556 -0.0303964 6 0.861756 0.890658 -0.0289019 9.9767e-01 0.00041960 weaklyHypometh 1.0000e+00 0.069933 weaklyHypometh 9.9390e-01 0.0027214 weaklyHypometh 1.0000e+00 0.54429 insignificant -0.0257524 1.6200e-01 insignificant 1.0000000 insignificant 0.937812 0.912999 0.021708 6 0.890803 0.850113 0.04068947 2.1795e-03 0.997503 weaklyHypermeth 4.1122e-02 1 weaklyHypermeth 7.8446e-03 0.99693 weaklyHypermeth 1.6343e-01 1 insignificant 0.049949 1.2560e-01 insignificant 1.0000000 insignificant 0.937812 0.943556 -0.0147320 6 0.890803 0.890658 0.00014516 6.7709e-01 0.123797 insignificant 1.0000e+00 1 insignificant 6.2657e-01 0.15022 insignificant 1.0000e+00 1 insignificant -0.0039013 8.1662e-01 insignificant 1.0000000 insignificant 0.912999 0.943556 -0.036350 6 0.850113 0.890658 -0.040544 9.8246e-01 4.8942e-03 weaklyHypometh 1.0000000 1.3228e-01 insignificant 0.99239844 0.00293184 weaklyHypometh 1.000000 0.137587 insignificant -0.053850 0.11903968 insignificant 1.000000 insignificant chr10 101740210 101741210 102777 DNMBP ENSG00000107554 0.621033 220 8 0.463663 116 5 0.507292 100 8 0.694321 174 8 0.594381 55 4 0.561711 319 8 0.640934 114 8 0.651557 126 8 0.50062 78 4 0.638480 98 8 0.613339 253 8 0.6908497 50 4 0.66670 157 8 0.725000 28 2 0.638645 102 8 0.5927198 57 4 0.46000 59 4 0.651404 184 8 0.632132 183 8 0.733558 305 8 0.674029 49 4 0.880952 60 3 0.581833 139 4 0.552083 49 3 0.5953704 55 4 0.570961 205 8 0.810335 57 3 0.811111 37 3 0.737639 116 5 0.57287 216 8 0.60728 258 8 0.611257 349 8 0.564644 140 8 0.450343 115 8 0.559156 151 8 0.626252 55 4 0.492915 128 8 0.4828837 204 8 0.543938 163 8 0.648545 169 8 0.620437 141 8 0.653524 135 8 0.61689 138 8 0.724049 0.645916 0.650276 0.7842903 0.7171587 0.702024 0.748744 0.742200 0.706796 0.730120 0.754492 0.7075943 0.75543 0.75920 0.794814 0.704175 0.69539 0.765875 0.678922 0.767668 0.739888 0.827197 0.764993 0.701117 0.688617 0.716113 0.714453 0.805670 0.815275 0.693877 0.7458695 0.746916 0.6677904 0.4358827 0.6847936 0.63470 0.684145 0.6277116 0.739132 0.713157 0.7436672 0.751296 0.726899 3 0.698704 0.711321 -0.0046311 8 0.633938 0.641187 -0.0072490 0.931543 0.4955577 insignificant 1 1 insignificant 0.957208 0.058355 insignificant 1 1 insignificant -0.05322590 0.1720726 insignificant 1 insignificant 0.698704 0.593947 0.1168691 8 0.633938 0.523916 0.1100218 4.6104e-07 0.999990 weaklyHypermeth 1.3971e-05 1 weaklyHypermeth 5.2789e-04 0.999967 weaklyHypermeth 1.8203e-02 1 weaklyHypermeth 0.0845516 0.02484387 weaklyHypermeth 0.47777 insignificant 0.698487 0.693029 0.0073018 8 0.593264 0.556290 0.0369738 2.4099e-01 0.64033715 insignificant 1.0000e+00 1.000000 insignificant 6.4913e-01 0.5939972 insignificant 1.0000e+00 1.00000 insignificant -0.0027490 9.1914e-01 insignificant 1.0000000 insignificant 0.711321 0.593947 0.117922 8 0.641187 0.523916 0.11727081 2.0169e-06 0.999972 weaklyHypermeth 7.3777e-05 1 weaklyHypermeth 1.1521e-05 1.00000 weaklyHypermeth 1.1521e-03 1 weaklyHypermeth 0.137777 5.1057e-03 weaklyHypermeth 0.1379931 insignificant 0.711139 0.693029 0.0041392 8 0.601319 0.556290 0.04502829 9.4009e-02 0.752200 insignificant 1.0000e+00 1 insignificant 5.7242e-02 0.79642 insignificant 1.0000e+00 1 insignificant 0.0504769 2.0677e-01 insignificant 1.0000000 insignificant 0.593434 0.693029 -0.114595 8 0.471018 0.556290 -0.085273 9.9963e-01 5.4325e-03 weaklyHypometh 1.0000000 1.4296e-01 insignificant 0.99983769 0.01712087 weaklyHypometh 1.000000 0.489168 insignificant -0.087301 0.02762675 weaklyHypometh 0.708378 insignificant chr10 102241858 102242858 102788 WNT8B ENSG00000075290 0.708759 174 7 0.670879 153 7 0.587941 129 7 0.783874 122 7 0.742942 120 7 0.696513 247 7 0.613001 116 7 0.719693 117 7 0.61358 89 5 0.812738 95 5 0.780313 216 7 0.5696781 71 4 0.73580 146 7 0.666667 18 3 0.741865 107 7 0.6846939 95 4 0.49819 104 4 0.630111 108 7 0.732026 149 7 0.672030 247 7 0.733248 53 5 0.870833 67 6 0.716491 96 7 0.745238 55 6 0.8971088 47 7 0.730800 144 7 0.814826 62 6 0.856039 63 4 0.693878 88 7 0.69302 188 7 0.72280 140 7 0.701994 305 7 0.678416 139 7 0.657350 131 7 0.581724 102 7 0.724490 50 4 0.681257 92 7 0.6062873 169 7 0.758225 173 7 0.770181 203 7 0.731981 145 7 0.661072 161 6 0.75184 182 7 0.832225 0.785724 0.710703 0.8435795 0.8316766 0.761233 0.742763 0.826887 0.735700 0.891222 0.855896 0.6794236 0.84800 0.82209 0.825509 0.787708 0.66859 0.752151 0.828027 0.752307 0.831064 0.901024 0.818197 0.782569 0.903695 0.852608 0.807782 0.881762 0.817560 0.770531 0.8036067 0.786202 0.7989648 0.7788359 0.7359691 0.81250 0.781896 0.7348685 0.859057 0.850909 0.8301821 0.774456 0.845861 3 0.745330 0.760703 -0.0177606 7 0.701924 0.723872 -0.0219480 0.893104 0.2188269 insignificant 1 1 insignificant 0.957067 0.019418 weaklyHypometh 1 1 insignificant -0.08162512 0.0071007 weaklyHypometh 1 insignificant 0.745330 0.651537 0.0581602 7 0.701924 0.638094 0.0638294 2.0514e-04 0.516356 weaklyHypermeth 4.1865e-03 1 weaklyHypermeth 9.0538e-02 0.353152 insignificant 1.0000e+00 1 insignificant 0.0281436 0.33138052 insignificant 1.00000 insignificant 0.745330 0.775463 -0.0435623 7 0.701924 0.742290 -0.0403667 9.7955e-01 0.02120198 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8454e-01 0.0289598 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0515955 7.4012e-02 insignificant 1.0000000 insignificant 0.760703 0.651537 0.075794 7 0.723872 0.638094 0.08577737 9.7451e-06 0.460403 weaklyHypermeth 2.8662e-04 1 weaklyHypermeth 8.9184e-04 0.61270 weaklyHypermeth 2.8769e-02 1 weaklyHypermeth 0.109769 2.8513e-03 weaklyHypermeth 0.0950437 weaklyHypermeth 0.760703 0.775463 -0.0246733 7 0.723872 0.742290 -0.01841869 9.4827e-01 0.086258 insignificant 1.0000e+00 1 insignificant 7.1593e-01 0.38213 insignificant 1.0000e+00 1 insignificant 0.0300297 3.1766e-01 insignificant 1.0000000 insignificant 0.651537 0.775463 -0.100218 7 0.638094 0.742290 -0.104196 9.8764e-01 3.6292e-04 weaklyHypometh 1.0000000 1.5779e-02 weaklyHypometh 0.97515414 0.01643221 weaklyHypometh 1.000000 0.483300 insignificant -0.079739 0.02226525 weaklyHypometh 0.601763 insignificant chr10 102433026 102434026 102804 HIF1AN ENSG00000166135 0.024396 288 5 0.023045 329 6 0.016803 187 6 0.005259 265 5 0.010753 158 6 0.046578 366 6 0.033382 239 6 0.035066 248 6 0.15595 279 6 0.010001 205 6 0.017786 298 6 0.0053763 169 6 0.00000 209 6 0.038462 52 1 0.013384 204 6 0.0040816 176 6 0.14286 1015 6 0.016631 331 5 0.017949 237 6 0.015951 374 6 0.046207 90 5 0.097934 158 6 0.024391 268 6 0.061224 166 6 0.0061728 111 5 0.016656 319 6 0.010332 177 5 0.065476 64 4 0.021393 201 6 0.01985 318 6 0.00250 285 5 0.016198 447 6 0.012839 288 6 0.016955 134 5 0.000000 237 4 0.000000 46 4 0.040697 145 7 0.1482821 299 6 0.016290 496 5 0.015595 366 5 0.011268 298 5 0.013453 306 5 0.17804 241 5 0.030208 0.015606 0.026021 0.0072888 0.0097524 0.097775 0.041533 0.015819 0.016066 0.027464 0.050751 0.0048762 0.00000 NA 0.012168 0.017342 0.00000 0.020127 0.020386 0.012664 0.050147 0.036646 0.024672 0.026993 0.022481 0.020144 0.024081 0.075872 0.033078 0.019069 0.0091047 0.020425 0.0064325 0.0099072 0.0011416 0.00000 0.027388 0.0057404 0.014221 0.029742 0.0085162 0.007604 0.051878 5 0.021496 0.025730 -0.0047285 6 0.041055 0.035948 0.0051065 0.704375 0.2643348 insignificant 1 1 insignificant 0.529534 0.694418 insignificant 1 1 insignificant -0.00067558 0.9576834 insignificant 1 insignificant 0.021496 0.014795 0.0080156 6 0.041055 0.035558 0.0054971 3.6154e-02 0.587586 weaklyHypermeth 4.7571e-01 1 insignificant 2.9441e-02 0.775915 weaklyHypermeth 5.3530e-01 1 insignificant -0.0047765 0.85421676 insignificant 1.00000 insignificant 0.021496 0.022261 -0.0040634 5 0.041055 0.086459 -0.0454043 6.7128e-01 0.32538345 insignificant 1.0000e+00 1.000000 insignificant 9.1037e-01 0.2914765 insignificant 1.0000e+00 1.00000 insignificant -0.0152427 6.7492e-01 insignificant 1.0000000 insignificant 0.025730 0.014795 0.014188 6 0.035948 0.035558 0.00039063 9.1749e-02 0.760394 insignificant 1.0000e+00 1 insignificant 3.7754e-02 0.71676 weaklyHypermeth 5.8990e-01 1 insignificant -0.004101 8.7308e-01 insignificant 1.0000000 insignificant 0.025730 0.022261 0.0032665 5 0.035948 0.086459 -0.05051075 7.2981e-01 0.171044 insignificant 1.0000e+00 1 insignificant 9.6187e-01 0.15332 insignificant 1.0000e+00 1 insignificant -0.0145672 6.8661e-01 insignificant 1.0000000 insignificant 0.014795 0.022261 -0.011718 5 0.035558 0.086459 -0.050901 9.2576e-01 7.6296e-03 weaklyHypometh 1.0000000 1.9074e-01 insignificant 0.99223025 0.01245184 weaklyHypometh 1.000000 0.415061 insignificant -0.010466 0.80137907 insignificant 1.000000 insignificant chr10 102623197 102624197 102846 PAX2 ENSG00000075891 0.390522 133 5 0.346038 191 5 0.521174 111 5 0.366453 63 5 0.466353 63 5 0.336041 257 5 0.424475 92 5 0.544016 147 5 0.42286 60 5 0.356364 57 5 0.487468 181 5 0.5000000 34 5 0.45435 126 5 0.550000 76 5 0.403218 146 5 0.3400000 16 2 NA 0 0 0.626294 153 5 0.586464 338 5 0.236197 287 5 0.745310 86 5 0.333333 6 0 0.547748 137 5 0.286175 161 5 0.5000000 2 0 0.395632 223 5 0.501826 184 5 0.627778 50 5 0.526179 270 5 0.31673 259 5 0.51902 216 5 0.765768 155 5 0.506411 142 5 0.336301 277 5 0.719721 294 5 NA 0 0 0.477971 108 5 0.3690386 391 5 0.087526 333 5 0.240187 240 5 0.172290 103 5 0.404596 113 5 0.20866 139 5 0.400309 0.408861 0.613226 0.2556907 0.5239278 0.358896 0.583366 0.575375 0.407434 0.389682 0.504705 0.4912536 0.49058 0.53827 0.423340 0.282653 NA 0.573173 0.611008 0.243129 0.646524 0.418554 0.677882 0.368171 0.506989 0.407515 0.501374 0.646259 0.522880 0.415836 0.5280275 0.747801 0.5400636 0.3353970 0.6960680 NA 0.547165 0.4371408 0.090426 0.255731 0.2056690 0.435822 0.224139 2 0.453502 0.510870 -0.0553489 5 0.373266 0.477869 -0.1046032 0.996566 0.0726460 insignificant 1 1 insignificant 0.999557 0.030079 weaklyHypometh 1 1 insignificant -0.06554889 0.2125481 lowCoverage 1 lowCoverage 0.453861 0.490924 -0.0264034 5 0.447919 0.472539 -0.0246205 2.2080e-01 0.078144 insignificant 1.0000e+00 1 insignificant 1.5372e-01 0.057092 insignificant 1.0000e+00 1 insignificant -0.0419786 0.58175746 lowCoverage 1.00000 lowCoverage 0.453861 0.193966 0.2543189 5 0.447919 0.194290 0.2536282 4.5127e-10 1.00000000 hypermethylated 7.5212e-08 1.000000 hypermethylated 1.0945e-06 0.9999999 hypermethylated 2.7363e-04 1.00000 hypermethylated 0.2172570 9.8887e-03 lowCoverage 0.7063358 lowCoverage 0.511175 0.490924 0.025984 5 0.506776 0.472539 0.03423663 1.7193e-01 0.128446 insignificant 1.0000e+00 1 insignificant 1.2645e-01 0.38096 insignificant 1.0000e+00 1 insignificant 0.023570 7.7906e-01 lowCoverage 1.0000000 lowCoverage 0.511175 0.193966 0.3082508 5 0.506776 0.194290 0.31248534 9.4764e-11 1.000000 hypermethylated 3.1588e-08 1 hypermethylated 8.3271e-07 1.00000 hypermethylated 2.3158e-04 1 hypermethylated 0.2828059 2.0707e-03 lowCoverage 0.2958194 lowCoverage 0.490924 0.193966 0.279487 5 0.472539 0.194290 0.278249 5.8498e-05 9.9992e-01 hypermethylated 0.0083568 1.0000e+00 hypermethylated 0.00157184 0.99914035 weaklyHypermeth 0.261974 1.000000 insignificant 0.259236 0.01730345 lowCoverage 0.506463 lowCoverage chr10 102758544 102759544 102867 LZTS2 ENSG00000107816 0.741758 42 3 0.815556 21 2 0.966667 12 1 0.913690 67 5 1.000000 10 0 0.889683 81 5 0.950000 18 1 0.875000 19 2 0.88333 14 0 1.000000 9 0 0.806795 47 4 1.0000000 1 0 1.00000 7 0 1.000000 2 0 0.800000 11 0 NA 0 0 NA 0 0 0.827899 44 4 0.923333 47 5 0.849206 38 5 0.749231 30 3 1.000000 4 0 0.953247 32 3 0.920000 36 2 0.9452920 187 5 0.865196 62 5 0.681667 72 2 0.750000 13 1 0.940000 24 3 0.95325 46 5 0.93778 37 4 0.935000 51 5 0.733261 47 5 0.917857 34 5 0.759259 56 4 0.780000 85 5 0.462062 173 5 0.8577778 54 5 0.574242 36 3 0.686667 27 3 0.785974 34 5 1.000000 20 2 0.90000 38 3 0.927198 0.894444 0.958333 0.8921131 1.0000000 0.912103 0.937500 0.859051 0.937500 1.000000 0.841827 NA 0.93585 0.96665 0.750000 NA NA 0.814286 0.904167 0.811508 0.811538 0.940418 0.941558 1.000000 0.954342 0.851366 0.897500 1.000000 0.925000 0.941558 0.9222222 0.950000 0.7248918 0.9285714 0.9490741 0.77500 0.675651 0.8500000 0.861364 0.858333 0.7324675 1.000000 0.875000 0 0.889796 0.897306 -0.0077657 3 0.910557 0.803067 0.1074895 0.454323 0.5492389 lowCoverage 1 1 lowCoverage 0.381291 0.799383 lowCoverage 1 1 lowCoverage 0.01649641 0.6454191 lowCoverage 1 lowCoverage 0.889796 0.699332 0.1697493 3 0.910557 0.642812 0.2677443 1.7019e-05 0.996507 lowCoverage 4.3638e-04 1 lowCoverage 1.4478e-02 0.997485 lowCoverage 2.8334e-01 1 lowCoverage 0.1506816 0.06644556 lowCoverage 1.00000 lowCoverage 0.889796 0.806452 0.0699812 3 0.910557 0.698162 0.2123944 1.4980e-01 0.84233408 lowCoverage 1.0000e+00 1.000000 lowCoverage 1.8544e-01 0.9675739 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.1130079 2.1166e-01 lowCoverage 1.0000000 lowCoverage 0.897306 0.699332 0.203540 5 0.803067 0.642812 0.16025487 1.9264e-05 0.985980 hypermethylated 4.9142e-04 1 hypermethylated 4.3898e-02 0.96719 weaklyHypermeth 6.6512e-01 1 insignificant 0.134185 9.8453e-02 lowCoverage 1.0000000 lowCoverage 0.897306 0.806452 0.0930166 3 0.803067 0.698162 0.10490490 1.7986e-02 0.812206 lowCoverage 5.1387e-01 1 lowCoverage 2.4014e-01 0.89360 lowCoverage 1.0000e+00 1 lowCoverage 0.0965114 2.8356e-01 lowCoverage 1.0000000 lowCoverage 0.699332 0.806452 -0.084220 3 0.642812 0.698162 -0.055350 8.9711e-01 6.2172e-02 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.90982932 0.62787364 lowCoverage 1.000000 1.000000 lowCoverage -0.037674 0.71303719 lowCoverage 1.000000 lowCoverage chr10 102761217 102762217 102868 LZTS2 ENSG00000107816 0.798313 97 7 0.710223 299 7 0.704217 236 7 0.859353 100 7 0.693970 105 7 0.760113 141 7 0.714649 147 6 0.770914 219 7 0.73714 210 7 0.875721 204 7 0.763304 212 7 0.7357631 82 5 0.76001 272 7 0.667508 64 3 0.778188 183 7 0.6377692 91 7 0.49286 38 4 0.708333 85 3 0.721173 265 7 0.725479 110 7 0.846192 74 7 0.688515 74 3 0.743487 156 7 0.746566 108 7 0.6729798 28 3 0.688328 358 9 0.711577 163 7 0.709768 62 6 0.811881 284 7 0.66705 467 7 0.79806 347 7 0.863563 150 7 0.592371 223 7 0.589217 180 7 0.723810 150 5 0.668182 77 5 0.653035 112 7 0.6907297 285 8 0.683312 101 6 0.817783 104 7 0.665143 76 4 0.693563 70 5 0.62713 86 6 0.760434 0.695592 0.652352 0.7844280 0.6599466 0.723258 0.700001 0.771009 0.717118 0.880795 0.768543 0.7073509 0.71012 0.70798 0.718550 0.594625 0.52887 0.693965 0.790086 0.638513 0.856714 0.602288 0.818317 0.681734 0.741567 0.729004 0.692264 0.662434 0.795171 0.698328 0.7580162 0.825601 0.5218135 0.5074766 0.4915420 0.55453 0.584290 0.6109845 0.635933 0.741801 0.5196051 0.603269 0.577142 3 0.737726 0.753744 -0.0202818 7 0.740551 0.737789 0.0027616 0.764772 0.4411426 insignificant 1 1 insignificant 0.926875 0.150766 insignificant 1 1 insignificant -0.01491411 0.5805619 insignificant 1 insignificant 0.737892 0.604674 0.1449857 7 0.764137 0.743905 0.0202320 5.5904e-08 0.299812 weaklyHypermeth 1.9966e-06 1 weaklyHypermeth 1.3095e-02 0.679968 weaklyHypermeth 2.6724e-01 1 insignificant 0.0778594 0.01704235 weaklyHypermeth 0.36522 insignificant 0.737892 0.610984 0.1086387 7 0.764137 0.777709 -0.0135718 5.5035e-02 0.76226221 insignificant 1.0000e+00 1.000000 insignificant 1.6482e-01 0.6563925 insignificant 1.0000e+00 1.00000 insignificant 0.0333634 3.9587e-01 insignificant 1.0000000 insignificant 0.753744 0.604288 0.170153 7 0.737789 0.718296 0.01949353 2.2050e-06 0.330026 weaklyHypermeth 7.6034e-05 1 weaklyHypermeth 9.6494e-04 0.60617 weaklyHypermeth 3.0154e-02 1 weaklyHypermeth 0.092774 8.0147e-03 weaklyHypermeth 0.1908266 insignificant 0.753744 0.610092 0.1224307 7 0.737789 0.755480 -0.01769064 6.2360e-03 0.396919 weaklyHypermeth 2.1504e-01 1 insignificant 3.8677e-02 0.60542 weaklyHypermeth 1.0000e+00 1 insignificant 0.0482776 2.4052e-01 insignificant 1.0000000 insignificant 0.604674 0.610984 -0.062393 7 0.743905 0.777709 -0.033804 8.3263e-01 6.8750e-02 insignificant 1.0000000 1.0000e+00 insignificant 0.96337388 0.30683691 insignificant 1.000000 1.000000 insignificant -0.044496 0.28892389 insignificant 1.000000 insignificant chr10 102764930 102765930 102869 LZTS2 ENSG00000107816 0.751893 221 5 0.583333 81 5 0.590550 77 5 0.771256 258 5 0.800519 28 3 0.540863 114 6 0.689773 39 3 0.643213 97 5 0.68353 76 5 0.603645 73 5 0.833366 145 5 0.7857143 40 5 0.74312 69 3 NA 0 0 0.615464 63 5 0.5000000 17 0 0.53490 39 5 0.718309 280 6 0.708333 75 5 0.702432 91 4 0.537500 46 3 0.471086 68 5 0.830840 146 6 0.395833 34 2 0.6361111 51 3 0.801098 165 5 0.659740 56 3 0.809524 23 3 0.759980 123 5 0.67193 199 5 0.87093 126 5 0.556088 141 6 0.617337 64 3 0.755753 80 5 0.029412 104 2 0.464286 25 2 0.808225 63 3 0.6527806 84 5 0.846898 159 5 0.754313 264 6 0.815628 190 6 0.840987 242 5 0.77312 201 6 0.801373 0.670635 0.599323 0.7653210 0.6679035 0.592105 0.501623 0.760713 0.756363 0.777894 0.840570 0.8435374 0.70030 NA 0.623837 0.623016 0.42882 0.787893 0.778694 0.670579 0.640873 0.551732 0.756283 0.523180 0.642857 0.815043 0.588126 0.757370 0.813529 0.791083 0.7917517 0.701886 0.5693760 0.7973569 0.3038107 0.42177 0.715626 0.4999905 0.747114 0.717251 0.7567680 0.735284 0.703829 1 0.745619 0.769949 -0.0252309 5 0.719150 0.749646 -0.0304953 0.944437 0.2959493 insignificant 1 1 insignificant 0.894198 0.321668 insignificant 1 1 insignificant 0.00697450 0.8895867 lowCoverage 1 lowCoverage 0.745619 0.511905 0.2292092 3 0.719150 0.649917 0.0692334 2.0174e-04 0.123928 lowCoverage 4.1865e-03 1 lowCoverage 1.0394e-01 0.192206 lowCoverage 1.0000e+00 1 lowCoverage 0.1190636 0.35597118 lowCoverage 1.00000 lowCoverage 0.745619 0.798295 -0.0258885 5 0.719150 0.792519 -0.0733686 9.4343e-01 0.04803695 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6107e-01 0.0127321 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.1324943 2.8181e-04 lowCoverage 0.0939372 lowCoverage 0.769949 0.511905 0.255836 3 0.749646 0.649917 0.09972862 1.9541e-03 0.697299 lowCoverage 3.7579e-02 1 lowCoverage 3.2718e-01 0.54082 lowCoverage 1.0000e+00 1 lowCoverage 0.112089 3.9809e-01 lowCoverage 1.0000000 lowCoverage 0.769949 0.798295 0.0110063 5 0.749646 0.792519 -0.04287336 5.1039e-01 0.302032 insignificant 1.0000e+00 1 insignificant 8.6099e-01 0.14723 insignificant 1.0000e+00 1 insignificant -0.1394688 1.1283e-02 lowCoverage 0.5938268 lowCoverage 0.511905 0.798295 -0.233178 3 0.649917 0.792519 -0.142602 6.2842e-01 1.2812e-02 lowCoverage 1.0000000 3.0504e-01 lowCoverage 0.76677459 0.23031415 lowCoverage 1.000000 1.000000 lowCoverage -0.251558 0.08211372 lowCoverage 1.000000 lowCoverage chr10 103348720 103349720 102957 DPCD ENSG00000166171 0.939702 138 5 0.821494 120 5 0.905208 48 4 0.917112 102 2 0.964615 50 5 0.858968 98 4 0.871717 44 4 0.933100 68 5 0.95714 52 4 0.917949 44 5 0.896036 155 5 0.7523810 23 2 0.81824 47 4 0.500000 6 0 0.767857 32 4 0.9000000 18 2 0.95000 16 2 0.928846 83 5 0.905140 94 4 0.844470 104 4 0.819872 35 4 1.000000 5 0 0.742440 93 5 0.944228 65 4 0.8772727 18 2 0.942393 135 5 0.952778 27 3 0.812500 12 0 0.917321 87 5 0.93617 142 5 0.90439 139 5 0.852778 123 4 0.850980 74 4 0.685970 114 5 0.850000 135 5 1.000000 12 1 0.814286 64 3 0.8879106 99 4 0.817593 94 5 0.889762 112 5 0.884091 101 5 0.940000 37 5 0.84848 58 2 0.930301 0.812459 0.896480 0.9135626 0.9598143 0.854149 0.841867 0.934129 0.940887 0.888263 0.891693 0.7577997 0.82601 0.73721 0.704433 0.860281 0.91890 0.942971 0.902398 0.877761 0.821353 0.974828 0.729982 0.939366 0.872414 0.931079 0.937021 0.793103 0.901173 0.935803 0.8742402 0.945163 0.8318684 0.6406779 0.8577586 0.92331 0.786946 0.8620367 0.789432 0.883970 0.8793103 0.934483 0.861546 0 0.877049 0.888763 -0.0087760 5 0.888966 0.901672 -0.0127056 0.850763 0.3999137 insignificant 1 1 insignificant 0.961315 0.259279 insignificant 1 1 insignificant -0.02434687 0.4478701 lowCoverage 1 lowCoverage 0.877049 0.726908 0.1314407 5 0.888966 0.805985 0.0829806 9.0416e-04 0.248430 weaklyHypermeth 1.7388e-02 1 weaklyHypermeth 3.2524e-01 0.127883 insignificant 1.0000e+00 1 insignificant 0.0193076 0.69665824 lowCoverage 1.00000 lowCoverage 0.877049 0.763682 0.0722688 5 0.888966 0.865048 0.0239177 6.0094e-02 0.38250275 insignificant 1.0000e+00 1.000000 insignificant 4.1441e-01 0.2599880 insignificant 1.0000e+00 1.00000 insignificant -0.0084874 7.8989e-01 lowCoverage 1.0000000 lowCoverage 0.888763 0.726908 0.141809 5 0.901672 0.805985 0.09568620 5.9725e-03 0.436821 weaklyHypermeth 9.6330e-02 1 weaklyHypermeth 2.1085e-01 0.37081 insignificant 1.0000e+00 1 insignificant 0.043655 3.7867e-01 lowCoverage 1.0000000 lowCoverage 0.888763 0.763682 0.0777314 5 0.901672 0.865048 0.03662323 1.0131e-01 0.613057 insignificant 1.0000e+00 1 insignificant 2.4826e-01 0.64765 insignificant 1.0000e+00 1 insignificant 0.0158595 6.0126e-01 lowCoverage 1.0000000 lowCoverage 0.726908 0.763682 -0.084743 5 0.805985 0.865048 -0.059063 7.5996e-01 2.5962e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.74089040 0.64107103 insignificant 1.000000 1.000000 insignificant -0.027795 0.56833499 lowCoverage 1.000000 lowCoverage chr10 103520042 103521042 103005 FBXW4 ENSG00000107829 0.86894 199 9 0.667677 76 7 0.72192 82 5 0.771887 153 3 0.66204 116 7 0.587066 173 4 0.23311 75 3 0.78231 122 9 0.773993 52 3 0.858056 86 3 0.87188 230 9 0.55455 44 3 0.680057 140 13 0.37668 44 3 0.681250 82 3 0.428571 10 0 0.50000 2 0 0.65834 215 10 0.934681 126 9 0.747306 110 9 0.704752 53 5 0.784449 86 3 0.591389 90 5 0.81000 41 4 0.831241 205 7 0.893972 138 9 0.660895 104 8 0.388889 19 0 0.72537 109 7 0.89871 168 9 0.929859 118 9 0.62671 141 9 0.171795 60 3 0.871720 231 9 0.111111 118 4 0.679839 100 3 0.456703 112 9 0.7792023 168 9 0.826909 112 3 0.81595 130 9 0.913043 81 3 0.727140 164 9 0.673707 98 3 0.90193 0.896364 0.90277 0.88787 0.932987 0.89082 0.90326 0.95856 0.776983 0.922909 0.92187 0.91074 0.971112 0.93383 0.978182 0.927273 NA 0.91404 0.911510 0.851063 0.862479 0.87450 0.906591 0.884861 0.910432 0.925134 0.945253 0.818182 0.85416 0.937979 0.926785 0.91735 0.319091 0.889363 0.395573 0.72805 0.609657 0.612587 0.8564370 0.786146 0.807905 0.893336 0.772416 1 0.83798 0.857480 0.0123046 7 0.65711 0.56753 0.0895766 0.299965 0.9995248 insignificant 1 1 insignificant 0.269885 0.9983732 insignificant 1 1.00000 insignificant -0.0691708 0.26124 insignificant 1 insignificant 0.84110 0.614702 0.2093157 7 0.64395 0.411119 0.232830 5.4337e-14 0.999999 hypermethylated 4.5281e-12 1 hypermethylated 7.4585e-06 1.00000 hypermethylated 6.7805e-04 1 hypermethylated 0.1562869 2.9513e-01 insignificant 1.0000e+00 insignificant 0.89031 0.808547 0.07651866 4 0.77681 0.67956 0.0972497 1.3272e-03 0.9853870 lowCoverage 7.3731e-02 1.0000 lowCoverage 1.5881e-02 0.9895090 lowCoverage 7.5624e-01 1 lowCoverage -0.12333392 0.05323209 insignificant 1.000000 insignificant 0.859968 0.614702 0.2064345 9 0.548941 0.411119 0.1378218 5.0160e-06 0.999994 hypermethylated 1.6202e-04 1 hypermethylated 7.0035e-03 0.99993 weaklyHypermeth 1.9454e-01 1 insignificant 0.22545769 1.5096e-01 insignificant 1.0000e+00 insignificant 0.880779 0.81282 0.0720373 4 0.86089 0.69775 0.163136 5.5771e-02 0.97644166 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.1814e-02 0.9589046 lowCoverage 1.0000000 1 lowCoverage -0.0541631 0.392884 insignificant 1 insignificant 0.635526 0.817863 -0.1385970 4 0.626838 0.77064 -0.1437993 0.97057372 8.5980e-03 lowCoverage 1.00000 2.1495e-01 lowCoverage 0.9728830 3.2087e-02 lowCoverage 1.00000 8.9210e-01 lowCoverage -0.2796208 8.6775e-02 insignificant 1.00000000 insignificant chr10 103523667 103524667 103007 FBXW4 ENSG00000107829 0.08438 160 6 0.088992 448 9 0.18453 287 9 0.048355 113 6 0.10396 267 9 0.085784 455 6 0.14334 347 9 0.21442 297 9 0.094192 229 9 0.051055 111 9 0.11123 428 9 0.16079 143 9 0.069396 187 9 0.17726 100 6 0.067454 243 9 0.046073 160 9 0.21725 69 3 0.11051 189 7 0.043856 347 9 0.048041 361 9 0.092587 111 8 0.000000 2 0 0.059156 229 9 0.17957 146 6 0.055556 21 3 0.065584 450 9 0.029483 272 7 0.082621 81 6 0.09590 250 9 0.22940 517 9 0.029692 458 9 0.20217 347 6 0.045776 286 9 0.079613 269 9 0.154934 911 8 0.000000 8 0 0.096611 182 9 0.0652720 464 9 0.052233 325 6 0.14785 282 7 0.068803 112 6 0.054839 128 6 0.062118 180 6 0.05730 0.082295 0.15919 0.08336 0.084405 0.12239 0.11267 0.10792 0.073312 0.021008 0.13126 0.10627 0.052894 0.18888 0.064603 0.022202 NA 0.18122 0.057331 0.045759 0.159372 NA 0.083658 0.098102 0.076419 0.051013 0.035074 0.025514 0.14544 0.050611 0.023262 0.13458 0.048423 0.058654 0.089394 NA 0.045977 0.052474 0.0443424 0.091944 0.065815 0.045576 0.079457 4 0.10045 0.073509 0.0240858 9 0.16200 0.22015 -0.0581487 0.015513 0.9989295 weaklyHypermeth 1 1 insignificant 0.082352 0.9999746 insignificant 1 1.00000 insignificant 0.0140673 0.57281 insignificant 1 insignificant 0.10032 0.078811 0.0196755 9 0.10489 0.081186 0.023702 1.3758e-03 0.028519 weaklyHypermeth 2.6977e-02 1 weaklyHypermeth 5.8226e-03 0.70925 weaklyHypermeth 1.5737e-01 1 insignificant 0.0338423 2.0365e-01 insignificant 1.0000e+00 insignificant 0.10043 0.073028 0.02597259 6 0.14954 0.10446 0.0450802 5.4339e-01 0.0062672 inconclusive 1.0000e+00 1.0000 insignificant 6.9899e-01 0.9255442 insignificant 1.0000e+00 1 insignificant 0.03037424 0.20123815 insignificant 1.000000 insignificant 0.072891 0.078811 -0.0024693 9 0.071309 0.081186 -0.0098771 1.8497e-01 0.060753 insignificant 1.0000e+00 1 insignificant 5.7644e-01 0.48517 insignificant 1.0000e+00 1 insignificant 0.01977503 5.1807e-01 insignificant 1.0000e+00 insignificant 0.073509 0.07310 0.0088669 6 0.22015 0.11316 0.106986 8.0546e-01 0.00113709 inconclusive 1.0000e+00 0.37903 insignificant 9.6281e-01 0.7008539 insignificant 1.0000000 1 insignificant 0.0163070 0.564289 insignificant 1 insignificant 0.078811 0.073314 0.0074456 6 0.081186 0.15088 -0.0696976 0.66419709 3.0874e-03 inconclusive 1.00000 8.8212e-02 inconclusive 0.9410358 7.5890e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0034681 9.0321e-01 insignificant 1.00000000 insignificant chr10 104163739 104164739 103087 NFKB2 ENSG00000077150 0.83841 261 10 0.773812 197 10 0.73402 261 10 0.801969 285 8 0.81560 156 10 0.831225 454 10 0.89975 186 10 0.76971 242 10 0.758774 333 10 0.786167 288 10 0.84743 239 10 0.63907 216 10 0.704931 333 11 0.71276 166 10 0.808003 257 10 0.853853 108 8 0.66462 66 6 0.70597 336 6 0.828676 123 8 0.771476 331 10 0.824697 95 8 0.621975 236 10 0.896986 217 10 0.60681 122 7 0.833671 161 9 0.845274 256 10 0.686586 216 10 0.633278 155 8 0.84036 166 8 0.76701 314 10 0.676301 327 10 0.88405 402 12 0.501043 264 10 0.493839 119 8 0.274031 408 8 0.398148 44 3 0.346265 263 10 0.5061163 213 10 0.690952 205 8 0.57103 244 6 0.747892 210 6 0.809930 277 8 0.735190 253 8 0.85875 0.719860 0.75323 0.81008 0.785238 0.84082 0.83922 0.80066 0.801479 0.838216 0.87546 0.72003 0.763373 0.75468 0.831847 0.848724 0.68439 0.75240 0.787333 0.775465 0.821936 0.65472 0.832639 0.726915 0.777921 0.801801 0.728258 0.794222 0.80014 0.834803 0.801251 0.86386 0.558651 0.549737 0.325896 0.69630 0.617793 0.529700 0.7048391 0.716255 0.653690 0.800824 0.721135 6 0.79578 0.793907 0.0004316 10 0.76536 0.76273 0.0026266 0.796017 0.3180445 insignificant 1 1 insignificant 0.819918 0.6628465 insignificant 1 1.00000 insignificant 0.0175624 0.61926 insignificant 1 insignificant 0.79578 0.475573 0.3225762 8 0.76536 0.351935 0.413421 2.8517e-36 1.000000 hypermethylated 7.1293e-34 1 hypermethylated 2.2745e-11 1.00000 hypermethylated 7.5815e-09 1 hypermethylated 0.3574050 9.3190e-05 hypermethylated 8.4718e-03 hypermethylated 0.79578 0.699748 0.08691543 8 0.76536 0.61452 0.1508402 1.8108e-04 0.9728015 weaklyHypermeth 1.2934e-02 1.0000 weaklyHypermeth 2.3075e-02 0.9431838 weaklyHypermeth 9.6146e-01 1 insignificant 0.06631228 0.17791869 insignificant 1.000000 insignificant 0.793168 0.475210 0.3171126 8 0.740059 0.329939 0.4101201 2.2138e-25 1.000000 hypermethylated 5.5344e-23 1 hypermethylated 3.4100e-10 1.00000 hypermethylated 1.1367e-07 1 hypermethylated 0.33984260 2.8298e-05 hypermethylated 4.0425e-03 hypermethylated 0.793907 0.69975 0.0805669 8 0.76273 0.61452 0.148214 1.4210e-04 0.98538325 weaklyHypermeth 1.0931e-02 1.00000 weaklyHypermeth 5.0092e-02 0.9357931 insignificant 1.0000000 1 insignificant 0.0487499 0.360024 insignificant 1 insignificant 0.475573 0.699748 -0.2146581 8 0.351935 0.61452 -0.2625811 0.99980017 1.0745e-05 hypomethylated 1.00000 1.1939e-03 hypomethylated 0.9999477 9.4128e-04 hypomethylated 1.00000 9.4128e-02 hypomethylated -0.2910927 5.9649e-04 hypomethylated 0.08521242 hypomethylated chr10 104349060 104350060 103095 ENSG00000207029 0.87523 258 8 0.819786 190 8 0.89533 208 8 0.941819 318 8 0.88814 111 8 0.931909 302 8 0.89434 191 8 0.89195 151 8 0.893779 187 8 0.919805 132 8 0.93540 252 8 0.77160 97 8 0.906941 213 8 0.92500 77 8 0.913852 196 8 0.883929 76 5 0.92121 62 6 0.86351 328 8 0.964821 158 8 0.949201 223 8 0.925568 91 8 0.890654 143 6 0.898403 192 8 0.93944 127 8 0.817589 106 7 0.899627 295 8 0.884638 135 7 0.890513 75 8 0.82781 157 8 0.91375 233 8 0.936935 248 8 0.95339 369 8 0.789951 220 8 0.645961 198 8 0.910081 173 6 0.787626 49 4 0.799242 135 8 0.7463516 225 8 0.892673 323 8 0.84009 311 8 0.887340 241 8 0.708641 248 8 0.845783 272 8 0.88808 0.826053 0.88608 0.94651 0.905965 0.93973 0.89781 0.89715 0.913468 0.938602 0.93202 0.77312 0.920641 0.93514 0.925534 0.891463 0.90221 0.87077 0.964388 0.954579 0.907235 0.88974 0.899499 0.947473 0.836969 0.904749 0.883045 0.889211 0.81930 0.925566 0.937458 0.95924 0.795073 0.700265 0.899846 0.75589 0.810969 0.783336 0.9002362 0.853291 0.900085 0.731022 0.862837 7 0.90295 0.900046 -0.0064895 8 0.90309 0.90389 -0.0007926 0.342382 0.5710755 insignificant 1 1 insignificant 0.216351 0.5057196 insignificant 1 1.00000 insignificant 0.0011839 0.94010 insignificant 1 insignificant 0.90295 0.671000 0.1667135 8 0.90309 0.777674 0.125418 1.1836e-07 0.990456 weaklyHypermeth 4.4762e-06 1 weaklyHypermeth 1.1814e-03 0.94426 weaklyHypermeth 3.9379e-02 1 weaklyHypermeth 0.1195087 1.7237e-02 weaklyHypermeth 6.8950e-01 insignificant 0.90295 0.863082 0.06305177 8 0.90309 0.83885 0.0642434 2.7123e-04 0.9925275 weaklyHypermeth 1.8082e-02 1.0000 weaklyHypermeth 6.0307e-04 0.9989781 weaklyHypermeth 5.4824e-02 1 weaklyHypermeth 0.06447155 0.12594943 insignificant 1.000000 insignificant 0.900046 0.671000 0.2020659 8 0.903885 0.777674 0.1262111 5.2869e-05 0.986516 hypermethylated 1.4686e-03 1 hypermethylated 1.1728e-02 0.79553 weaklyHypermeth 3.0071e-01 1 insignificant 0.11832479 1.7595e-02 weaklyHypermeth 7.3312e-01 insignificant 0.900046 0.86308 0.0795645 8 0.90389 0.83885 0.065036 1.3041e-04 0.98574496 weaklyHypermeth 1.0868e-02 1.00000 weaklyHypermeth 1.3014e-02 0.9874007 weaklyHypermeth 0.6849471 1 insignificant 0.0632876 0.132919 insignificant 1 insignificant 0.671000 0.863082 -0.0930542 8 0.777674 0.83885 -0.0611751 0.95877858 2.1812e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8394818 3.1703e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0550372 2.8346e-01 insignificant 1.00000000 insignificant chr10 104368695 104369695 103100 ENSG00000207029 0.80266 257 9 0.746013 184 10 0.67984 268 10 0.842717 299 9 0.82055 125 10 0.847332 387 11 0.88821 131 9 0.74645 340 10 0.765528 211 10 0.841757 265 11 0.88564 357 10 0.70829 122 6 0.766415 375 11 0.82713 228 9 0.794863 252 11 0.457501 82 8 0.72222 19 0 0.80808 396 9 0.778859 288 10 0.814274 244 10 0.723065 152 9 0.453857 204 9 0.763729 215 9 0.77626 130 10 0.833650 192 8 0.888448 300 10 0.798102 286 9 0.696320 90 8 0.80046 169 9 0.90920 291 10 0.851337 243 10 0.86652 243 10 0.355427 225 10 0.686555 152 9 0.765298 205 9 0.484896 68 6 0.395342 193 11 0.4429655 395 10 0.586352 127 8 0.79809 219 8 0.633607 207 7 0.530433 186 8 0.690789 211 9 0.90355 0.777837 0.79879 0.92932 0.797940 0.92584 0.91554 0.83472 0.884635 0.896761 0.87266 0.79218 0.842911 0.91505 0.914755 0.583589 0.88903 0.80613 0.857526 0.856374 0.910649 0.60002 0.882698 0.854142 0.861573 0.885310 0.859916 0.802613 0.84107 0.885524 0.851226 0.86169 0.341873 0.668344 0.838783 0.49678 0.425019 0.418536 0.6494695 0.763925 0.774879 0.632984 0.758837 6 0.84928 0.832935 0.0150759 10 0.75035 0.72065 0.0297020 0.290586 0.9820688 insignificant 1 1 insignificant 0.388523 0.9661914 insignificant 1 1.00000 insignificant -0.0028624 0.94477 insignificant 1 insignificant 0.84928 0.489086 0.3598083 10 0.75035 0.436915 0.313438 8.6360e-35 0.999999 hypermethylated 1.7175e-32 1 hypermethylated 3.8878e-08 0.99895 hypermethylated 6.4796e-06 1 hypermethylated 0.2554696 1.1370e-02 weaklyHypermeth 5.1683e-01 insignificant 0.84928 0.728135 0.13465239 9 0.75035 0.67160 0.0787476 6.1768e-15 0.9515402 weaklyHypermeth 6.1768e-12 1.0000 weaklyHypermeth 2.7096e-08 0.9908273 weaklyHypermeth 1.3548e-05 1 weaklyHypermeth 0.12936169 0.04417715 weaklyHypermeth 1.000000 insignificant 0.833400 0.489499 0.3440368 10 0.742139 0.480229 0.2619098 7.5714e-19 0.999998 hypermethylated 1.5143e-16 1 hypermethylated 9.7912e-06 0.99984 hypermethylated 1.2239e-03 1 hypermethylated 0.25833197 9.9440e-03 weaklyHypermeth 5.2337e-01 insignificant 0.833400 0.72737 0.1231973 9 0.74214 0.61994 0.122196 7.9803e-06 0.94625934 weaklyHypermeth 9.3896e-04 1.00000 weaklyHypermeth 9.2987e-06 0.9923056 weaklyHypermeth 0.0018597 1 weaklyHypermeth 0.1322241 0.048075 weaklyHypermeth 1 insignificant 0.489499 0.727368 -0.2281471 9 0.480229 0.61994 -0.1397138 0.99871890 1.7564e-05 hypomethylated 1.00000 1.7564e-03 hypomethylated 0.9754473 1.3803e-02 weaklyHypometh 1.00000 5.1123e-01 insignificant -0.1261079 1.6003e-01 insignificant 1.00000000 insignificant chr10 104377838 104378838 103104 ENSG00000207029 0.58767 317 7 0.526111 290 8 0.55424 203 8 0.726355 271 7 0.61701 92 7 0.632539 481 7 0.45803 158 7 0.47641 178 7 0.549582 185 7 0.642220 161 7 0.71076 278 7 0.41241 95 5 0.643400 169 7 0.85764 87 4 0.630162 180 7 0.638730 90 5 0.45122 95 5 0.55404 248 7 0.698675 297 7 0.763552 408 7 0.644730 71 6 0.651338 117 7 0.667479 224 7 0.79427 112 7 0.513726 96 7 0.633664 326 7 0.635687 117 6 0.564971 89 5 0.56062 182 7 0.53022 335 8 0.666687 337 7 0.59815 477 7 0.464638 223 8 0.570443 172 7 0.483444 232 8 0.672050 62 5 0.493284 164 7 0.5540788 363 9 0.686404 294 7 0.65886 286 7 0.578292 233 7 0.691670 270 5 0.687241 282 7 0.77386 0.731866 0.68665 0.78990 0.700829 0.76979 0.66691 0.72445 0.706704 0.717470 0.76467 0.66668 0.787673 0.79187 0.735059 0.705585 0.68532 0.78660 0.774389 0.790311 0.679459 0.75122 0.738795 0.855933 0.741042 0.797088 0.748062 0.687898 0.73565 0.738984 0.779864 0.76046 0.650181 0.700816 0.649973 0.72570 0.697769 0.739924 0.8015402 0.785060 0.783816 0.807072 0.797302 5 0.74177 0.728554 -0.0074631 7 0.59550 0.64489 -0.0493863 0.847296 0.2690847 insignificant 1 1 insignificant 0.797951 0.0849672 insignificant 1 1.00000 insignificant -0.0152578 0.65143 insignificant 1 insignificant 0.74177 0.627467 0.0580481 7 0.59550 0.546396 0.049103 1.6480e-06 0.944110 weaklyHypermeth 5.3162e-05 1 weaklyHypermeth 2.0635e-03 0.92025 weaklyHypermeth 5.7320e-02 1 weaklyHypermeth 0.0668817 1.2266e-01 insignificant 1.0000e+00 insignificant 0.74205 0.789744 -0.04169573 7 0.59817 0.63283 -0.0346533 9.8013e-01 0.0378184 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.9292e-01 0.0106173 weaklyHypometh 1.0000e+00 1 insignificant -0.05395636 0.12210217 insignificant 1.000000 insignificant 0.728554 0.627467 0.0669749 7 0.644885 0.546396 0.0984889 4.1263e-07 0.999636 weaklyHypermeth 1.8756e-05 1 weaklyHypermeth 1.8979e-03 0.99925 weaklyHypermeth 7.2997e-02 1 weaklyHypermeth 0.08213947 5.7633e-02 insignificant 1.0000e+00 insignificant 0.728335 0.78974 -0.0347920 7 0.60543 0.63283 -0.027399 9.6006e-01 0.05705082 insignificant 1.0000e+00 1.00000 insignificant 8.9954e-01 0.0554134 insignificant 1.0000000 1 insignificant -0.0386986 0.229581 insignificant 1 insignificant 0.626853 0.789744 -0.1025726 7 0.495996 0.63283 -0.1368308 0.99988123 4.0799e-06 weaklyHypometh 1.00000 5.0999e-04 weaklyHypometh 0.9995593 2.8980e-05 weaklyHypometh 1.00000 6.0009e-03 weaklyHypometh -0.1208381 1.2128e-02 weaklyHypometh 0.63832032 insignificant chr10 104398816 104399816 103105 TRIM8 ENSG00000171206 0.59929 313 7 0.145105 193 4 0.42305 152 4 0.454054 210 5 0.25531 122 4 0.656549 222 4 0.52217 180 4 0.23215 182 4 0.182366 175 4 0.284536 137 4 0.39778 208 4 0.50359 117 4 0.283412 199 4 0.24696 64 2 0.175447 261 4 0.407821 116 4 0.32084 116 3 0.48896 346 7 0.439724 243 4 0.089256 183 4 0.384069 99 5 0.056643 83 4 0.604216 149 4 0.27503 100 4 0.265038 51 4 0.401648 269 5 0.471366 208 4 0.532341 71 4 0.23583 182 4 0.39245 338 4 0.052065 296 4 0.64312 209 7 0.219018 178 4 0.060441 133 4 0.087494 256 5 0.070346 129 6 0.129994 208 5 0.2350263 236 7 0.119373 290 7 0.19454 218 7 0.197241 244 7 0.459609 350 7 0.113209 229 8 0.24495 0.153470 0.47767 0.15813 0.308319 0.32550 0.34906 0.25674 0.225407 0.278242 0.37548 0.32703 0.076850 0.25003 0.134428 0.356724 0.12821 0.28152 0.156316 0.081069 0.371013 0.06630 0.348145 0.457602 0.277888 0.154832 0.251131 0.434370 0.18971 0.104756 0.071075 0.48962 0.034886 0.068502 0.194587 0.02924 0.064364 0.078124 0.0069753 0.056208 0.027232 0.107856 0.070381 4 0.32085 0.254022 0.0170486 4 0.54892 0.48229 0.0666219 0.965005 0.8783895 lowCoverage 1 1 lowCoverage 0.954878 0.8580116 lowCoverage 1 1.00000 lowCoverage -0.0040660 0.95115 lowCoverage 1 lowCoverage 0.31938 0.101754 0.2271800 7 0.46623 0.155063 0.311169 3.3507e-12 0.999993 hypermethylated 1.8615e-10 1 hypermethylated 4.6005e-08 0.99982 hypermethylated 6.5721e-06 1 hypermethylated 0.2216991 1.6729e-04 lowCoverage 1.3941e-02 lowCoverage 0.32039 0.216704 0.20417002 7 0.50967 0.20967 0.3000016 3.6912e-11 1.0000000 hypermethylated 7.3824e-09 1.0000 hypermethylated 4.5274e-11 1.0000000 hypermethylated 4.5274e-08 1 hypermethylated 0.13862519 0.09876028 lowCoverage 1.000000 lowCoverage 0.253177 0.101754 0.1547303 4 0.473442 0.155063 0.3183789 6.0488e-08 0.999861 lowCoverage 3.1836e-06 1 lowCoverage 4.0832e-06 0.99924 lowCoverage 5.8332e-04 1 lowCoverage 0.22576510 2.7116e-03 lowCoverage 2.0858e-01 lowCoverage 0.253411 0.21654 0.1844982 4 0.47875 0.18870 0.290055 8.7024e-07 1.00000000 lowCoverage 1.4504e-04 1.00000 lowCoverage 7.9924e-06 1.0000000 lowCoverage 0.0018597 1 lowCoverage 0.1426912 0.119555 lowCoverage 1 lowCoverage 0.101754 0.217226 -0.0396935 7 0.155063 0.21381 -0.0587512 0.68880903 2.4372e-02 weaklyHypometh 1.00000 4.9739e-01 insignificant 0.8984158 2.0897e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0830739 2.8410e-01 insignificant 1.00000000 insignificant chr10 104414202 104415202 103107 TRIM8 ENSG00000171206 0.76386 231 7 0.705540 134 5 0.60891 143 5 0.767609 194 6 0.66357 77 5 0.790749 236 6 0.52401 139 5 0.69529 160 5 0.666423 95 5 0.685579 102 5 0.72363 317 6 0.75571 59 4 0.728596 113 5 0.55556 39 5 0.563190 111 5 0.622059 49 4 0.80417 28 2 0.76245 186 6 0.740251 244 6 0.773251 172 6 0.686035 71 5 0.774123 68 6 0.596604 169 5 0.58924 98 5 0.786079 83 4 0.652386 203 6 0.908571 77 5 0.819826 74 5 0.63443 207 5 0.64560 180 6 0.702266 266 6 0.78449 233 6 0.704934 128 6 0.660341 120 5 0.647619 133 5 0.807692 31 2 0.593328 166 5 0.6711336 236 7 0.649787 272 6 0.79366 206 5 0.751143 179 6 0.675286 183 5 0.815245 166 7 0.75353 0.709888 0.66268 0.80319 0.736560 0.73679 0.74374 0.77117 0.698627 0.759714 0.81844 0.75211 0.772162 0.67636 0.811418 0.648864 0.77597 0.76295 0.775292 0.761264 0.744578 0.77033 0.709076 0.710064 0.772382 0.746273 0.878000 0.801436 0.72885 0.740552 0.783444 0.78962 0.659888 0.720044 0.702121 0.81503 0.682449 0.702377 0.7772466 0.785049 0.761291 0.790925 0.840096 5 0.78226 0.792366 0.0024656 6 0.71482 0.68582 0.0290045 0.428627 0.6443700 insignificant 1 1 insignificant 0.549064 0.3805706 insignificant 1 1.00000 insignificant -0.0199502 0.56458 insignificant 1 insignificant 0.78226 0.771499 0.0288666 5 0.71482 0.666419 0.048401 8.1118e-03 0.608746 weaklyHypermeth 1.4231e-01 1 insignificant 8.4893e-02 0.57100 insignificant 1.0000e+00 1 insignificant 0.0141795 6.9243e-01 insignificant 1.0000e+00 insignificant 0.78226 0.790258 -0.02752436 6 0.71482 0.72718 -0.0123616 9.2706e-01 0.0416407 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.8904e-01 0.0218085 weaklyHypometh 1.0000e+00 1 insignificant -0.04200252 0.29762672 insignificant 1.000000 insignificant 0.792366 0.771499 0.0234527 5 0.685816 0.666419 0.0193970 2.7693e-03 0.310713 weaklyHypermeth 5.4299e-02 1 weaklyHypermeth 8.4141e-03 0.41892 weaklyHypermeth 2.2741e-01 1 insignificant 0.03412974 4.1988e-01 insignificant 1.0000e+00 insignificant 0.792366 0.79026 -0.0313543 6 0.68582 0.72718 -0.041366 9.6376e-01 0.00395256 weaklyHypometh 1.0000e+00 0.98814 insignificant 9.1397e-01 0.0140758 weaklyHypometh 1.0000000 1 insignificant -0.0220523 0.620263 insignificant 1 insignificant 0.771499 0.790258 -0.0562450 5 0.666419 0.72718 -0.0607631 0.99251130 2.5152e-03 weaklyHypometh 1.00000 7.8600e-02 weaklyHypometh 0.9956268 2.0488e-02 weaklyHypometh 1.00000 6.9203e-01 insignificant -0.0561820 2.3230e-01 insignificant 1.00000000 insignificant chr10 104595785 104596785 103115 ENSG00000216358 0.64375 191 6 0.616080 175 7 0.57045 122 6 0.706174 134 5 0.47727 30 3 0.641630 239 6 0.58333 22 2 0.63464 57 3 0.538889 37 3 0.723016 28 3 0.74899 94 3 0.56250 10 0 0.804167 39 3 0.85714 24 3 0.676413 47 3 0.200000 9 0 0.37500 5 0 0.66853 166 6 0.643333 48 3 0.753923 216 7 0.969697 21 2 0.750000 17 2 0.645081 146 5 0.76923 31 2 1.000000 12 2 0.717243 188 6 0.256818 24 2 0.496429 18 2 0.63086 75 3 0.72630 189 6 0.654196 121 6 0.67862 210 6 0.531496 138 6 0.559524 28 3 0.623965 134 6 1.000000 7 0 0.498455 44 3 0.6893248 197 6 0.803190 215 6 0.74177 206 6 0.756480 162 6 0.764564 155 5 0.757147 185 5 0.80846 0.684444 0.68304 0.81495 0.689281 0.75886 0.51990 0.65385 0.636401 0.829590 0.73616 0.94403 0.842973 0.78038 0.723313 0.462687 0.30597 0.71811 0.766915 0.831124 0.957938 0.62649 0.763893 0.928817 0.973509 0.719608 0.475305 0.733904 0.69825 0.683933 0.805360 0.71133 0.586929 0.411158 0.686352 1.00000 0.673046 0.677219 0.8625057 0.806190 0.707590 0.695533 0.684067 2 0.71057 0.729087 -0.0115647 5 0.65351 0.67349 -0.0199734 0.347122 0.2191624 insignificant 1 1 insignificant 0.457678 0.2871352 insignificant 1 1.00000 insignificant -0.0699445 0.29837 lowCoverage 1 lowCoverage 0.71057 0.667883 0.0496616 5 0.65351 0.641102 0.012410 4.3402e-03 0.762563 weaklyHypermeth 7.7504e-02 1 weaklyHypermeth 4.8629e-01 0.72959 insignificant 1.0000e+00 1 insignificant -0.0291994 7.3304e-01 lowCoverage 1.0000e+00 lowCoverage 0.71057 0.789816 -0.04705039 5 0.65351 0.79098 -0.1374648 9.9160e-01 0.0010168 weaklyHypometh 1.0000e+00 0.5084 insignificant 9.8890e-01 0.0048852 weaklyHypometh 1.0000e+00 1 insignificant -0.14336776 0.00045917 lowCoverage 0.091834 lowCoverage 0.729087 0.667883 0.0588007 6 0.673486 0.641102 0.0323838 2.9547e-02 0.882109 weaklyHypermeth 4.8438e-01 1 insignificant 5.9542e-01 0.84295 insignificant 1.0000e+00 1 insignificant 0.04074506 6.7328e-01 lowCoverage 1.0000e+00 lowCoverage 0.729087 0.78982 -0.0443002 6 0.67349 0.79098 -0.117491 9.4856e-01 0.00109438 weaklyHypometh 1.0000e+00 0.37903 insignificant 9.6684e-01 0.0061504 weaklyHypometh 1.0000000 1 insignificant -0.0734233 0.224323 lowCoverage 1 lowCoverage 0.667883 0.789816 -0.0937567 6 0.641102 0.79098 -0.1498753 0.99815526 1.0175e-03 weaklyHypometh 1.00000 3.7686e-02 weaklyHypometh 0.9991321 9.3526e-02 insignificant 1.00000 1.0000e+00 insignificant -0.1141684 1.9110e-01 lowCoverage 1.00000000 lowCoverage chr10 105305907 105306907 103140 NEURL ENSG00000107954 0.75665 86 2 0.809642 316 5 0.78350 118 5 0.946218 212 5 0.79004 55 4 0.750598 272 5 0.74955 81 5 0.91568 118 5 0.876949 99 4 0.930556 59 4 0.71070 193 5 0.72527 41 3 0.812696 113 4 0.96429 17 1 0.790606 68 4 0.770833 18 2 0.77778 429 3 0.76757 159 5 0.771212 117 5 0.796128 162 5 0.646401 77 5 0.668765 68 3 0.816845 172 5 0.96769 93 5 0.576509 130 4 0.871378 281 5 0.698099 102 5 0.616883 33 2 0.95270 119 5 0.83643 325 5 0.765813 295 5 0.76762 200 5 0.637386 184 5 0.608822 162 5 0.906103 85 2 0.833333 58 4 0.661905 110 5 0.7939203 282 5 0.781499 60 3 0.98710 172 4 0.750607 206 5 0.965084 97 5 0.939054 201 5 0.90436 0.866431 0.84879 0.90897 0.925048 0.90291 0.81255 0.89335 0.819488 0.947028 0.85163 0.82094 0.970707 0.89865 0.908922 0.647539 0.98530 0.88997 0.912121 0.922888 0.923179 0.89275 0.930460 0.930417 0.781297 0.948753 0.887393 0.895701 0.95274 0.959186 0.937948 0.89813 0.801449 0.655878 0.823229 1.00000 0.929420 0.903150 0.9304234 0.970823 0.956503 0.970588 0.927064 2 0.90703 0.916051 -0.0129542 5 0.79360 0.81216 -0.0185678 0.895961 0.5251514 insignificant 1 1 insignificant 0.856375 0.5329678 insignificant 1 1.00000 insignificant 0.0443953 0.29113 lowCoverage 1 lowCoverage 0.90703 0.834279 0.0708556 5 0.79360 0.648765 0.144831 1.8048e-03 0.994897 weaklyHypermeth 3.4052e-02 1 weaklyHypermeth 4.9007e-01 0.89292 insignificant 1.0000e+00 1 insignificant 0.0695779 2.2882e-01 lowCoverage 1.0000e+00 lowCoverage 0.90716 0.938776 -0.02909436 5 0.78654 0.71558 0.0709593 8.6603e-01 0.0753543 insignificant 1.0000e+00 1.0000 insignificant 9.9567e-01 0.1390475 insignificant 1.0000e+00 1 insignificant -0.07484536 0.21026691 lowCoverage 1.000000 lowCoverage 0.916051 0.834279 0.0836272 5 0.812164 0.648765 0.1633985 2.4763e-02 0.998785 weaklyHypermeth 4.1272e-01 1 insignificant 6.7139e-01 0.92937 insignificant 1.0000e+00 1 insignificant 0.02518266 6.9112e-01 lowCoverage 1.0000e+00 lowCoverage 0.916269 0.93878 -0.0123834 5 0.80717 0.71558 0.091590 8.5687e-01 0.53745360 insignificant 1.0000e+00 1.00000 insignificant 9.7799e-01 0.3026116 insignificant 1.0000000 1 insignificant -0.1192406 0.085768 lowCoverage 1 lowCoverage 0.836758 0.938776 -0.0948376 5 0.676406 0.71558 -0.0391701 0.98781817 1.0895e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9986396 4.1491e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1444233 6.8588e-02 lowCoverage 1.00000000 lowCoverage chr10 105368690 105369690 103141 NEURL ENSG00000107954 0.89785 290 8 0.848729 185 6 0.90563 171 6 0.911161 311 8 0.94106 102 6 0.867489 424 8 0.88567 148 6 0.92690 179 6 0.896006 224 6 0.917820 193 6 0.89891 201 6 0.87005 84 6 0.892246 243 6 0.90340 125 6 0.923848 239 6 0.952381 58 6 0.75675 27 2 0.78188 343 6 0.918047 170 8 0.911887 265 8 0.870106 77 4 0.862510 176 6 0.883780 194 6 0.99048 127 6 0.906193 112 6 0.937512 218 9 0.877329 192 6 0.882378 123 6 0.93180 170 6 0.88008 290 8 0.787464 242 7 0.89623 323 8 0.322030 187 6 0.341694 114 6 0.178631 227 7 0.330534 151 7 0.408702 192 6 0.2722387 282 8 0.913805 297 8 0.94155 254 8 0.868649 265 8 0.872939 288 8 0.899173 299 8 0.88738 0.837712 0.89307 0.87965 0.933371 0.88172 0.88091 0.91234 0.885873 0.922595 0.91037 0.82991 0.883606 0.90027 0.894985 0.918472 0.78709 0.86359 0.888571 0.878894 0.847590 0.85095 0.887338 0.988689 0.907198 0.911301 0.866115 0.865220 0.92338 0.859877 0.875337 0.89235 0.236697 0.262103 0.241911 0.31826 0.326758 0.252298 0.8705574 0.887886 0.882743 0.834117 0.878674 6 0.89065 0.888938 0.0033253 6 0.88793 0.89603 -0.0080915 0.515799 0.4923124 insignificant 1 1 insignificant 0.417923 0.5548128 insignificant 1 1.00000 insignificant -0.0017690 0.92159 insignificant 1 insignificant 0.89065 0.303556 0.5613683 6 0.88793 0.296849 0.591086 3.8183e-78 1.000000 hypermethylated 3.8183e-75 1 hypermethylated 5.7166e-13 0.99995 hypermethylated 2.8583e-10 1 hypermethylated 0.5814141 1.6716e-06 hypermethylated 5.5719e-04 hypermethylated 0.89026 0.883820 0.00729091 6 0.84914 0.91321 -0.0640719 2.0039e-01 0.3419271 insignificant 1.0000e+00 1.0000 insignificant 3.5925e-01 0.7769800 insignificant 1.0000e+00 1 insignificant -0.00883685 0.61976374 insignificant 1.000000 insignificant 0.888938 0.303556 0.5498040 6 0.896026 0.296849 0.5991773 4.6424e-49 1.000000 hypermethylated 2.3212e-46 1 hypermethylated 2.7979e-11 0.99998 hypermethylated 1.3989e-08 1 hypermethylated 0.58318308 5.7712e-07 hypermethylated 1.9237e-04 hypermethylated 0.888938 0.88374 0.0027831 6 0.89603 0.90357 -0.007544 4.0260e-01 0.21415951 insignificant 1.0000e+00 1.00000 insignificant 3.3151e-01 0.1643754 insignificant 1.0000000 1 insignificant -0.0070679 0.723524 insignificant 1 insignificant 0.303556 0.883738 -0.5840753 8 0.296849 0.90357 -0.6067212 1.00000000 1.2714e-35 hypomethylated 1.00000 6.3568e-33 hypomethylated 1.0000000 1.4266e-08 hypomethylated 1.00000 7.1328e-06 hypomethylated -0.5902509 8.6082e-07 hypomethylated 0.00035559 hypomethylated chr10 105745488 105746488 103156 SLK ENSG00000065613 0.69529 405 10 0.530285 249 11 0.68356 103 8 0.710939 259 11 0.78524 206 11 0.674659 181 10 0.63631 180 11 0.72085 173 11 0.640060 132 11 0.702814 166 11 0.71652 293 8 0.67966 119 9 0.738365 296 11 0.81760 108 8 0.739817 213 11 0.646384 54 6 0.45857 193 7 0.71770 462 11 0.572956 192 8 0.740890 198 10 0.803030 43 6 0.870238 62 3 0.769517 227 11 0.60694 95 10 0.572851 134 8 0.694834 279 8 0.599135 125 11 0.865278 40 2 0.75483 294 11 0.62703 240 8 0.755022 241 8 0.62916 255 8 0.682709 305 11 0.632841 265 9 0.726343 371 11 0.975000 23 1 0.745113 99 8 0.5587362 273 8 0.647166 256 10 0.80762 336 11 0.623118 393 10 0.794407 287 10 0.722410 251 11 0.74770 0.613488 0.68176 0.82203 0.816250 0.76674 0.73659 0.77775 0.691902 0.795179 0.73619 0.64814 0.780790 0.82677 0.757963 0.709383 0.61705 0.76893 0.659297 0.781509 0.865586 0.91348 0.820391 0.722613 0.716436 0.808753 0.708127 0.866344 0.79636 0.758751 0.775598 0.78295 0.692158 0.670795 0.704234 0.90028 0.828734 0.645318 0.7881039 0.840125 0.717966 0.814106 0.851901 1 0.73840 0.811794 -0.0430748 11 0.63955 0.66868 -0.0291332 0.945534 0.0042189 weaklyHypometh 1 1 insignificant 0.913779 0.0016414 weaklyHypometh 1 0.54713 insignificant -0.0318984 0.38222 insignificant 1 insignificant 0.73858 0.783683 0.0065664 11 0.68523 0.674471 0.010761 9.9123e-03 0.372260 weaklyHypermeth 1.6520e-01 1 insignificant 5.4067e-01 0.15064 insignificant 1.0000e+00 1 insignificant -0.0397004 5.3834e-01 insignificant 1.0000e+00 insignificant 0.73858 0.858831 -0.05202425 10 0.68523 0.67017 0.0150597 8.4881e-01 0.0049193 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.4537e-01 0.0034802 weaklyHypometh 1.0000e+00 1 insignificant -0.03852103 0.39142254 insignificant 1.000000 insignificant 0.812100 0.783683 0.0479454 11 0.680732 0.674471 0.0062611 6.3673e-05 0.639413 weaklyHypermeth 1.7209e-03 1 weaklyHypermeth 1.0009e-01 0.86643 insignificant 1.0000e+00 1 insignificant -0.00780197 9.0802e-01 insignificant 1.0000e+00 insignificant 0.812100 0.85883 -0.0186328 10 0.68073 0.67017 0.010560 7.7246e-01 0.39478776 insignificant 1.0000e+00 1.00000 insignificant 8.8515e-01 0.7423474 insignificant 1.0000000 1 insignificant -0.0066226 0.893381 insignificant 1 insignificant 0.783683 0.858831 -0.0561531 10 0.674471 0.67017 0.0042985 0.86060647 2.8266e-03 weaklyHypometh 1.00000 8.3135e-02 weaklyHypometh 0.9849026 3.3310e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0011794 9.8676e-01 insignificant 1.00000000 insignificant chr10 108554704 108555704 103403 SORCS1 ENSG00000108018 0.90920 87 5 0.628342 63 5 0.82778 18 2 0.679431 75 5 0.74821 45 5 0.827381 49 5 0.73036 26 2 0.67455 67 5 0.655556 35 5 0.833333 31 4 0.84973 170 5 0.53333 12 0 0.870265 72 5 0.85479 41 5 0.851282 41 5 0.700000 12 0 1.00000 1 0 0.69697 104 2 0.874347 66 5 0.710317 51 3 0.775000 17 1 0.666667 3 0 0.906818 42 2 0.76718 35 5 0.898148 40 1 0.735755 60 5 0.820000 39 2 0.942857 16 2 0.81765 62 2 0.81556 73 5 0.781349 40 5 0.84691 64 5 0.687460 72 5 0.791176 61 4 0.718267 76 5 0.971429 11 1 0.604167 33 2 0.6997354 74 5 0.800819 90 5 0.79223 61 4 0.758937 98 4 0.770833 65 1 0.795455 74 4 0.87268 0.707219 0.79286 0.80095 0.770762 0.77466 0.80889 0.72468 0.599206 0.888889 0.77368 0.72222 0.807630 0.78768 0.909646 0.809524 NA 0.78571 0.818809 0.789116 0.818452 NA 0.900974 0.728938 0.807008 0.884310 0.819841 0.857143 0.81816 0.837302 0.722732 0.76511 0.688039 0.763655 0.566050 0.92857 0.517857 0.764550 0.8232108 0.816177 0.757131 0.782738 0.818903 0 0.77632 0.804481 -0.0286133 5 0.75423 0.79769 -0.0434580 0.870180 0.0600899 insignificant 1 1 insignificant 0.875108 0.1927512 insignificant 1 1.00000 insignificant -0.0417314 0.22787 lowCoverage 1 lowCoverage 0.77705 0.700306 0.0769445 5 0.80185 0.740694 0.061158 1.3309e-02 0.959761 weaklyHypermeth 2.1126e-01 1 insignificant 1.5426e-01 0.91149 insignificant 1.0000e+00 1 insignificant 0.0273864 6.4649e-01 lowCoverage 1.0000e+00 lowCoverage 0.77663 0.809278 -0.02347655 4 0.76883 0.80954 -0.0407122 8.0961e-01 0.3837541 lowCoverage 1.0000e+00 1.0000 lowCoverage 8.8796e-01 0.5158339 lowCoverage 1.0000e+00 1 lowCoverage -0.01089604 0.68698227 lowCoverage 1.000000 lowCoverage 0.805726 0.700617 0.1030656 5 0.847307 0.753032 0.0942747 4.8402e-05 0.999555 weaklyHypermeth 1.4236e-03 1 weaklyHypermeth 2.1307e-02 0.99726 weaklyHypermeth 4.9552e-01 1 insignificant 0.06911780 2.5771e-01 lowCoverage 1.0000e+00 lowCoverage 0.805726 0.80928 0.0313095 4 0.84731 0.80954 0.037767 1.3657e-01 0.79145720 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.3714e-01 0.7917827 lowCoverage 1.0000000 1 lowCoverage 0.0308354 0.216228 lowCoverage 1 lowCoverage 0.700617 0.809278 -0.0910909 4 0.753032 0.80954 -0.0565081 0.96231916 2.2839e-02 lowCoverage 1.00000 4.7582e-01 lowCoverage 0.9613316 7.5312e-02 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0382824 4.9351e-01 lowCoverage 1.00000000 lowCoverage chr10 108679627 108680627 103425 SORCS1 ENSG00000108018 0.87554 191 5 0.924784 125 5 0.53750 75 5 0.937500 87 5 0.86652 34 3 0.789677 180 5 0.95871 61 4 0.83861 58 4 0.885088 57 5 0.787316 49 4 0.93329 167 8 0.83399 36 3 0.813356 75 5 0.98182 26 2 0.798889 61 5 0.911111 32 4 0.97436 30 2 0.87772 128 5 0.896104 71 5 0.910675 172 5 0.891667 39 4 0.671875 33 4 0.851019 86 5 0.74554 38 3 0.908333 15 2 0.896429 101 5 0.758507 49 4 0.825397 36 3 0.96528 90 4 0.83218 86 5 0.758864 94 5 0.95391 180 5 0.846475 79 5 0.788584 77 5 0.703051 97 5 0.919444 29 3 0.624621 82 5 0.8903229 94 5 0.946878 125 5 0.65520 171 5 0.842517 108 5 0.939799 103 4 0.944170 124 5 0.83427 0.877535 0.81203 0.88477 0.766364 0.85619 0.90481 0.86651 0.830069 0.890347 0.92345 0.83049 0.893063 0.90605 0.839432 0.879699 0.96466 0.94387 0.845425 0.794787 0.869173 0.82237 0.837836 0.803706 0.933518 0.856355 0.828530 0.756980 0.92168 0.857352 0.773288 0.89886 0.835561 0.798700 0.834174 0.88650 0.845231 0.815173 0.9402372 0.894260 0.832396 0.906060 0.947510 3 0.86472 0.854438 0.0101939 5 0.84798 0.84916 -0.0011759 0.374443 0.4722735 insignificant 1 1 insignificant 0.300534 0.7431869 insignificant 1 1.00000 insignificant 0.0283791 0.41243 lowCoverage 1 lowCoverage 0.86472 0.796943 0.0689541 5 0.84798 0.761606 0.086377 3.9433e-03 0.964241 weaklyHypermeth 7.3024e-02 1 weaklyHypermeth 1.6048e-02 0.95339 weaklyHypermeth 3.4887e-01 1 insignificant 0.0712120 2.0594e-01 lowCoverage 1.0000e+00 lowCoverage 0.86472 0.892063 -0.02069901 5 0.84798 0.74900 0.0989864 3.6234e-01 0.3870825 insignificant 1.0000e+00 1.0000 insignificant 5.8327e-01 0.5647597 insignificant 1.0000e+00 1 insignificant 0.00091528 0.98843961 lowCoverage 1.000000 lowCoverage 0.854438 0.796943 0.0535937 5 0.849159 0.761606 0.0875530 9.5664e-02 0.963587 insignificant 1.0000e+00 1 insignificant 7.6802e-02 0.94458 insignificant 1.0000e+00 1 insignificant 0.04283292 4.4398e-01 lowCoverage 1.0000e+00 lowCoverage 0.853601 0.89223 -0.0325577 5 0.81036 0.77689 0.033478 3.6422e-01 0.27057814 insignificant 1.0000e+00 1.00000 insignificant 9.0495e-01 0.6069359 insignificant 1.0000000 1 insignificant -0.0274638 0.673465 lowCoverage 1 lowCoverage 0.796943 0.892063 -0.0879643 5 0.761606 0.74900 0.0126093 0.94203624 7.5890e-04 weaklyHypometh 1.00000 2.9188e-02 weaklyHypometh 0.9913863 3.1533e-02 weaklyHypometh 1.00000 8.9210e-01 insignificant -0.0702967 3.6221e-01 lowCoverage 1.00000000 lowCoverage chr10 111943574 111944574 103535 ENSG00000216242 0.66110 274 10 0.655752 212 9 0.55881 190 10 0.747944 182 9 0.79569 193 10 0.735584 412 10 0.65897 200 10 0.63710 175 9 0.658582 172 10 0.657563 147 10 0.72234 372 10 0.71842 159 7 0.754447 200 10 0.74589 29 3 0.660059 211 10 0.793581 151 8 0.48208 264 7 0.79277 185 9 0.683192 257 9 0.756321 395 10 0.896627 95 6 0.729995 86 8 0.686912 173 10 0.75795 90 6 0.715499 81 8 0.695355 303 10 0.695421 101 8 0.603671 75 7 0.74513 134 9 0.71269 302 10 0.735114 281 10 0.70081 539 10 0.665766 206 10 0.732944 153 9 0.681324 329 10 0.731715 75 5 0.692169 173 7 0.6866399 313 10 0.682683 241 9 0.74060 294 9 0.777644 226 9 0.644702 194 9 0.751313 260 9 0.68510 0.621796 0.55297 0.72604 0.824869 0.71046 0.63588 0.63311 0.659896 0.697120 0.73571 0.76241 0.755299 0.71584 0.740728 0.806989 0.62052 0.70510 0.734298 0.736249 0.828004 0.71324 0.655284 0.767290 0.716963 0.693624 0.776911 0.685943 0.71721 0.702655 0.714905 0.69123 0.652538 0.702116 0.665011 0.64567 0.696666 0.662700 0.6278140 0.703732 0.773786 0.610540 0.704862 6 0.70502 0.723009 -0.0055647 10 0.67400 0.70875 -0.0347479 0.834129 0.0253986 weaklyHypometh 1 1 insignificant 0.990314 0.0091820 weaklyHypometh 1 1.00000 insignificant -0.0291212 0.27885 insignificant 1 insignificant 0.70533 0.690152 0.0252225 10 0.70953 0.698602 0.010930 1.2276e-01 0.353767 insignificant 1.0000e+00 1 insignificant 4.1418e-01 0.30661 insignificant 1.0000e+00 1 insignificant -0.0046166 8.2860e-01 insignificant 1.0000e+00 insignificant 0.70533 0.721811 -0.00171734 9 0.70953 0.72687 -0.0173400 4.1797e-01 0.0036649 weaklyHypometh 1.0000e+00 1.0000 insignificant 6.8972e-01 0.0093311 weaklyHypometh 1.0000e+00 1 insignificant -0.02557858 0.41770237 insignificant 1.000000 insignificant 0.723234 0.690152 0.0275248 10 0.721371 0.698602 0.0227693 3.5633e-02 0.915723 weaklyHypermeth 5.6560e-01 1 insignificant 2.2061e-01 0.92817 insignificant 1.0000e+00 1 insignificant 0.02450452 2.9192e-01 insignificant 1.0000e+00 insignificant 0.723234 0.72181 0.0129729 9 0.72137 0.72687 -0.005501 5.8003e-01 0.22194768 insignificant 1.0000e+00 1.00000 insignificant 4.9458e-01 0.4419004 insignificant 1.0000000 1 insignificant 0.0035426 0.911683 insignificant 1 insignificant 0.690152 0.721811 -0.0174805 9 0.698602 0.72687 -0.0282703 0.80860629 4.1297e-05 weaklyHypometh 1.00000 3.1767e-03 weaklyHypometh 0.7492637 8.3226e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0209619 4.6503e-01 insignificant 1.00000000 insignificant chr10 112113204 112114204 103552 SMNDC1 ENSG00000119953 0.97491 116 5 0.871083 163 6 0.82041 99 6 0.984251 153 5 0.76071 46 5 0.954201 270 5 0.93422 78 5 0.92647 82 5 0.815580 58 5 0.933333 42 5 0.93937 201 5 0.95000 21 1 0.933918 90 5 1.00000 27 1 0.961538 58 5 1.000000 30 4 NA 0 0 0.95167 116 5 0.935101 124 5 0.966581 206 5 0.920000 54 5 1.000000 1 0 0.924149 142 5 1.00000 45 4 1.000000 11 0 0.932381 237 7 0.855556 88 5 0.981818 38 5 0.86847 145 5 0.92739 237 7 0.931095 239 7 0.92899 329 5 0.652575 238 7 0.853333 117 5 0.741929 308 7 NA 0 0 0.887768 135 5 0.8072802 217 7 0.977746 232 5 0.97206 207 6 0.966615 113 5 0.983333 105 5 0.925747 120 7 0.96535 0.923327 0.87963 0.98197 0.761046 0.93533 0.93674 0.92784 0.813910 0.941581 0.94161 0.94845 0.933502 1.00000 0.966297 1.000000 NA 0.95440 0.936257 0.953652 0.923711 NA 0.894026 1.000000 1.000000 0.954685 0.857274 0.984067 0.86842 0.931737 0.967009 0.91480 0.852060 0.864605 0.922386 NA 0.898774 0.899352 0.9747247 0.961795 0.955177 0.985395 0.932961 0 0.92323 0.920128 0.0025453 5 0.90760 0.90947 -0.0018696 0.403480 0.7154095 insignificant 1 1 insignificant 0.607831 0.7212269 insignificant 1 1.00000 insignificant -0.0121354 0.55731 lowCoverage 1 lowCoverage 0.92323 0.759606 0.1376134 5 0.90760 0.741772 0.165824 8.3097e-08 0.324452 weaklyHypermeth 3.4624e-06 1 weaklyHypermeth 1.4134e-03 0.80514 weaklyHypermeth 4.2830e-02 1 weaklyHypermeth 0.1384413 2.5979e-02 lowCoverage 9.7907e-01 lowCoverage 0.92323 0.942085 -0.02421574 5 0.90760 0.96225 -0.0546502 9.9038e-01 0.0447241 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.2551e-01 0.2404198 insignificant 1.0000e+00 1 insignificant -0.03808188 0.04814206 lowCoverage 1.000000 lowCoverage 0.920128 0.759606 0.1283300 5 0.909466 0.741772 0.1676939 9.3316e-07 0.064046 weaklyHypermeth 3.5891e-05 1 weaklyHypermeth 4.6720e-03 0.58003 weaklyHypermeth 1.4600e-01 1 insignificant 0.15057675 1.9498e-02 lowCoverage 7.5349e-01 lowCoverage 0.920128 0.94208 -0.0290350 5 0.90947 0.96225 -0.052781 9.9574e-01 0.00033483 weaklyHypometh 1.0000e+00 0.33483 insignificant 9.7549e-01 0.0750029 insignificant 1.0000000 1 insignificant -0.0259465 0.155871 lowCoverage 1 lowCoverage 0.759606 0.942085 -0.1872820 5 0.741772 0.96225 -0.2204746 0.89660826 8.2777e-05 weaklyHypometh 1.00000 5.9126e-03 weaklyHypometh 0.9933406 3.6039e-03 weaklyHypometh 1.00000 2.2524e-01 insignificant -0.1765232 1.1832e-02 weaklyHypometh 0.63832032 insignificant chr10 114584079 114585079 103736 ENSG00000218581 0.86190 231 5 0.786589 256 5 0.85543 139 5 0.816531 215 5 0.89128 76 5 0.941325 224 4 0.90247 160 5 0.87947 145 5 0.833449 147 5 0.907018 88 5 0.86153 187 5 0.74556 98 5 0.867281 137 5 NA 0 0 0.828139 141 5 0.794286 78 3 0.84155 73 5 0.67534 224 5 0.883759 124 5 0.941007 189 3 0.887374 58 5 0.669504 75 3 0.792189 156 5 0.80967 66 5 0.842130 54 3 0.842493 258 5 0.891373 61 5 0.941799 75 5 0.91368 137 3 0.88819 240 5 0.878110 229 5 0.87540 216 5 0.732707 199 5 0.613131 119 5 0.603279 145 3 0.166667 18 1 0.896066 85 5 0.0798739 293 5 0.733296 141 3 0.73612 163 5 0.524660 132 3 0.694872 132 3 0.806565 153 3 0.80756 0.781504 0.80710 0.86378 0.908603 0.89798 0.83498 0.85765 0.871664 0.894641 0.88228 0.75680 0.812334 NA 0.877979 0.783267 0.89641 0.72031 0.890910 0.891674 0.931511 0.58715 0.861657 0.876947 0.809010 0.886824 0.823942 0.927434 0.84772 0.910928 0.930406 0.84438 0.693694 0.545089 0.522598 0.15426 0.839883 0.122837 0.6773154 0.702374 0.640703 0.590103 0.655567 3 0.84175 0.874462 -0.0284364 5 0.83980 0.85609 -0.0162859 0.941644 0.1340314 insignificant 1 1 insignificant 0.935607 0.3327049 insignificant 1 1.00000 insignificant -0.0045588 0.85982 lowCoverage 1 lowCoverage 0.84175 0.396973 0.4474152 5 0.83980 0.439114 0.400689 2.0007e-15 1.000000 hypermethylated 2.2230e-13 1 hypermethylated 1.8299e-03 0.99959 weaklyHypermeth 5.2282e-02 1 weaklyHypermeth 0.3328133 5.2608e-02 lowCoverage 1.0000e+00 lowCoverage 0.84175 0.661581 0.17650538 3 0.83980 0.67481 0.1649967 2.8739e-13 0.9999528 lowCoverage 1.4370e-10 1.0000 lowCoverage 7.0091e-07 0.9709241 lowCoverage 1.7523e-04 1 lowCoverage 0.14899781 0.03103946 lowCoverage 1.000000 lowCoverage 0.874462 0.396973 0.4822446 5 0.856089 0.439114 0.4169745 2.5070e-10 1.000000 hypermethylated 2.5070e-08 1 hypermethylated 4.5194e-03 0.99929 weaklyHypermeth 1.4579e-01 1 insignificant 0.33737212 5.0294e-02 lowCoverage 1.0000e+00 lowCoverage 0.874462 0.66158 0.2028020 3 0.85609 0.67481 0.181283 7.1182e-10 0.99993700 lowCoverage 3.5591e-07 1.00000 lowCoverage 3.4183e-05 0.9904633 lowCoverage 0.0056971 1 lowCoverage 0.1535566 0.026735 lowCoverage 1 lowCoverage 0.396973 0.661581 -0.2877519 3 0.439114 0.67481 -0.2356918 0.99770851 1.6917e-02 lowCoverage 1.00000 3.8449e-01 lowCoverage 0.9357730 3.6124e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.1838155 2.3526e-01 lowCoverage 1.00000000 lowCoverage chr10 114750556 114751556 103767 ENSG00000219783 0.88388 119 4 0.820558 214 5 0.69545 173 5 0.659420 89 4 0.67549 113 5 0.908915 250 5 0.83903 96 4 0.91536 121 5 0.743385 119 4 0.871261 135 4 0.91795 218 6 0.67824 70 4 0.671654 129 5 0.66070 107 4 0.813604 172 4 0.696124 83 4 0.74892 467 1 0.67798 106 4 0.943215 140 4 0.903381 155 5 0.851786 45 4 0.517926 74 4 0.865116 92 4 0.70045 99 4 0.867344 46 4 0.895427 213 5 0.584438 120 4 0.482026 47 4 0.91820 137 4 0.87857 272 5 0.922318 199 5 0.91107 200 5 0.464766 172 5 0.272394 72 4 0.367500 62 4 0.638889 16 1 0.188752 146 5 0.9002411 172 4 0.804924 76 4 0.55674 64 4 0.576407 78 4 0.437282 56 2 0.801580 51 4 0.83043 0.731680 0.61545 0.80197 0.760486 0.84551 0.85702 0.86611 0.701937 0.815495 0.88461 0.59161 0.612333 0.79376 0.736730 0.683517 0.85684 0.69064 0.937142 0.861598 0.845391 0.40561 0.789663 0.755457 0.856247 0.891153 0.569358 0.737898 0.89639 0.850848 0.870831 0.90047 0.491384 0.106374 0.185278 0.57479 0.228010 0.739569 0.7850092 0.580358 0.479903 0.447238 0.759265 4 0.81664 0.815635 0.0029512 5 0.78186 0.72095 0.0609153 0.766178 0.5010653 insignificant 1 1 insignificant 0.902234 0.2301763 insignificant 1 1.00000 insignificant 0.0033371 0.95078 lowCoverage 1 lowCoverage 0.81664 0.434169 0.3860892 4 0.78186 0.450263 0.331598 3.1452e-13 0.998614 lowCoverage 1.8501e-11 1 lowCoverage 8.2477e-06 0.99594 lowCoverage 6.8731e-04 1 lowCoverage 0.3141355 3.1330e-02 lowCoverage 9.7907e-01 lowCoverage 0.81606 0.623457 0.19396363 4 0.75813 0.53015 0.2279793 1.3208e-04 0.9997499 lowCoverage 1.0160e-02 1.0000 lowCoverage 3.9687e-03 0.9999087 lowCoverage 2.8348e-01 1 lowCoverage 0.15083830 0.10635410 lowCoverage 1.000000 lowCoverage 0.814527 0.434375 0.3750654 4 0.690365 0.461316 0.2290495 4.7904e-08 0.997865 lowCoverage 2.8179e-06 1 lowCoverage 3.9977e-03 0.99931 lowCoverage 1.3785e-01 1 lowCoverage 0.31079835 3.2350e-02 lowCoverage 9.5146e-01 lowCoverage 0.809622 0.62462 0.1844322 4 0.63006 0.60846 0.021607 1.4012e-02 0.99388675 lowCoverage 5.3884e-01 1.00000 lowCoverage 1.9098e-02 0.9928297 lowCoverage 0.8303631 1 lowCoverage 0.1475012 0.129463 lowCoverage 1 lowCoverage 0.439739 0.624615 -0.2068262 4 0.328337 0.60846 -0.2801204 0.99982651 1.8825e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.9964889 1.6127e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.1632972 2.3982e-01 lowCoverage 1.00000000 lowCoverage chr10 114866790 114867790 103790 ENSG00000179487 0.95556 251 3 0.663538 417 5 0.95556 70 5 0.901259 176 5 0.81574 97 5 0.870254 295 5 0.96838 151 5 0.89812 96 5 0.913333 66 3 0.885000 33 4 0.93813 454 5 0.86667 44 3 0.963725 57 3 0.98571 87 3 0.946245 69 3 0.950000 72 3 0.99950 2052 3 0.87838 127 3 0.979987 123 3 0.978786 289 3 0.500000 11 1 NA 0 0 0.899615 128 4 0.70952 37 2 1.000000 3 0 0.913261 317 5 0.250000 7 0 NA 0 0 0.96557 126 3 0.93763 317 5 0.984814 262 5 0.86242 359 5 0.727632 119 3 0.600000 120 5 0.372297 300 3 NA 0 0 0.439653 349 5 0.8971170 338 5 0.601921 536 5 0.72865 404 5 0.985507 227 5 0.849869 181 3 0.648819 261 5 0.92593 0.740545 0.91919 0.93529 0.919192 0.91931 0.96069 0.95563 0.954545 0.829545 0.94646 1.00000 0.950535 0.98052 0.910888 0.886364 0.99986 0.78970 0.973165 0.955656 0.087069 NA 0.903671 0.696970 1.000000 0.938996 NA NA 0.95045 0.932722 0.975183 0.94191 0.835526 0.868687 0.288754 NA 0.443360 0.928493 0.5949138 0.798126 0.967062 0.818737 0.692076 0 0.94329 0.928526 0.0111788 5 0.91584 0.89306 0.0227876 0.330070 0.9357715 insignificant 1 1 insignificant 0.416218 0.9078607 insignificant 1 1.00000 insignificant 0.1134113 0.18645 lowCoverage 1 lowCoverage 0.94329 0.638662 0.3026430 5 0.91584 0.591844 0.323999 1.1399e-13 1.000000 hypermethylated 7.5994e-12 1 hypermethylated 1.2170e-06 1.00000 hypermethylated 1.3522e-04 1 hypermethylated 0.3083540 3.0599e-02 lowCoverage 9.7907e-01 lowCoverage 0.94329 0.746426 0.19105827 5 0.91584 0.70612 0.2097199 7.8163e-12 1.0000000 weaklyHypermeth 1.9541e-09 1.0000 weaklyHypermeth 1.7607e-04 0.9999982 weaklyHypermeth 2.2009e-02 1 weaklyHypermeth 0.15274111 0.09290323 lowCoverage 1.000000 lowCoverage 0.928526 0.638662 0.2930612 5 0.893056 0.591844 0.3012118 8.3984e-07 1.000000 hypermethylated 3.3594e-05 1 hypermethylated 1.3248e-03 1.00000 weaklyHypermeth 5.2993e-02 1 weaklyHypermeth 0.19494265 1.4698e-01 lowCoverage 1.0000e+00 lowCoverage 0.928526 0.74643 0.1822911 5 0.89306 0.70612 0.186932 7.3233e-07 0.99999972 weaklyHypermeth 1.4504e-04 1.00000 weaklyHypermeth 1.2274e-02 0.9997803 weaklyHypermeth 0.6849471 1 insignificant 0.0393298 0.713581 lowCoverage 1 lowCoverage 0.638662 0.746426 -0.1105680 5 0.591844 0.70612 -0.1142795 0.98738955 1.5425e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9745212 3.2489e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1556129 2.2743e-01 lowCoverage 1.00000000 lowCoverage chr10 114897912 114898912 103803 TCF7L2 ENSG00000148737 0.82565 340 5 0.887603 128 5 0.93559 53 5 0.982196 213 2 0.96667 40 3 0.937251 229 5 0.93772 49 5 0.93175 46 5 0.916667 45 3 0.973333 44 3 0.91780 148 5 0.85714 32 3 0.977778 44 3 1.00000 6 0 0.888038 43 3 0.880000 29 3 1.00000 519 5 0.97113 304 3 0.933548 63 5 0.978904 181 5 0.977778 29 3 0.666667 5 0 0.874167 66 5 0.95000 30 3 1.000000 13 2 0.980000 108 5 0.952381 47 3 0.928571 32 3 0.98000 59 5 0.87936 107 5 0.952727 80 5 0.97332 216 5 0.768577 96 5 0.989474 69 5 0.419355 207 5 0.800000 25 3 0.625641 74 5 0.8996032 107 5 0.630271 230 3 0.92955 244 5 0.656454 511 2 0.718660 53 3 0.942264 179 3 0.81842 0.889330 0.91433 0.98910 0.942177 0.94798 0.92692 0.94574 0.895918 0.953741 0.90792 0.86443 0.961451 0.93818 0.870716 0.877551 1.00000 0.98232 0.927584 0.972118 0.977324 0.78570 0.902891 0.913265 0.936319 0.987755 0.941205 0.916910 0.98776 0.838815 0.953432 0.97185 0.772505 0.989259 0.389730 0.79592 0.614338 0.808552 0.6460841 0.911967 0.558373 0.725710 0.925512 0 0.94523 0.941919 -0.0054180 5 0.94430 0.94877 -0.0044774 0.755534 0.2388266 insignificant 1 1 insignificant 0.961098 0.3047141 insignificant 1 1.00000 insignificant 0.0086902 0.76309 lowCoverage 1 lowCoverage 0.94523 0.752595 0.1771967 5 0.94430 0.705575 0.238722 3.0928e-08 0.431474 weaklyHypermeth 1.3447e-06 1 weaklyHypermeth 7.8165e-02 0.93157 insignificant 1.0000e+00 1 insignificant 0.1844963 7.7255e-02 lowCoverage 1.0000e+00 lowCoverage 0.94523 0.907149 0.05075588 3 0.94430 0.85445 0.0898511 1.0908e-03 0.9999356 lowCoverage 6.8176e-02 1.0000 lowCoverage 2.2219e-03 0.9999678 lowCoverage 1.7092e-01 1 lowCoverage 0.15949898 0.07553161 lowCoverage 1.000000 lowCoverage 0.941919 0.752595 0.1903988 5 0.948774 0.705575 0.2431989 5.2026e-05 0.834066 weaklyHypermeth 1.4686e-03 1 weaklyHypermeth 7.8477e-02 0.99093 insignificant 1.0000e+00 1 insignificant 0.17580612 9.0165e-02 lowCoverage 1.0000e+00 lowCoverage 0.941919 0.90715 0.0676934 3 0.94877 0.85445 0.094328 1.3334e-02 0.99997901 lowCoverage 5.3334e-01 1.00000 lowCoverage 6.4139e-04 0.9999984 lowCoverage 0.0801736 1 lowCoverage 0.1508088 0.087622 lowCoverage 1 lowCoverage 0.752595 0.907149 -0.1092842 3 0.705575 0.85445 -0.1488704 0.46914986 1.3758e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.2723212 8.1524e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0249973 8.2029e-01 lowCoverage 1.00000000 lowCoverage chr10 114933209 114934209 103814 TCF7L2 ENSG00000148737 0.85991 136 9 0.726919 242 9 0.85723 116 5 0.889013 136 7 0.63915 142 5 0.921633 170 8 0.71944 100 6 0.82781 200 9 0.697240 76 9 0.841348 93 4 0.84715 297 10 0.99231 44 2 0.842420 274 10 0.79985 136 7 0.920833 104 5 0.866667 37 5 0.00000 3 0 0.82802 253 8 0.971915 203 10 0.899338 138 8 0.858648 122 5 0.833811 92 7 0.833560 107 5 0.69630 64 4 0.848706 79 7 0.920106 379 10 0.901602 215 10 0.738095 48 5 0.87591 240 8 0.92753 320 10 0.965735 339 9 0.81909 208 9 0.731772 170 9 0.941593 190 10 1.000000 65 3 0.729167 19 1 0.780433 85 9 0.9287625 295 10 0.593333 78 6 0.83333 122 8 0.836162 115 7 0.591446 85 6 0.741913 92 5 0.86620 0.747324 0.93023 0.85365 0.964571 0.94742 0.85759 0.90249 0.880519 0.919630 0.92049 0.96738 0.944922 0.94114 0.947000 0.960000 0.48580 0.92060 0.962047 0.941081 0.980935 0.85907 0.929942 0.954844 0.914385 0.966271 0.881032 0.949143 0.92827 0.924032 0.981070 0.95506 0.753988 0.950184 0.905688 0.82400 0.909176 0.913747 0.4381867 0.819182 0.757671 0.827422 0.490370 2 0.90093 0.929348 -0.0308110 9 0.78020 0.83375 -0.0535520 0.462875 0.0160190 weaklyHypometh 1 1 insignificant 0.947737 0.1557782 insignificant 1 1.00000 insignificant -0.0541802 0.30250 insignificant 1 insignificant 0.90070 0.905340 -0.0115624 9 0.72922 0.759328 -0.030108 9.7894e-01 0.379986 insignificant 1.0000e+00 1 insignificant 9.1159e-01 0.54604 insignificant 1.0000e+00 1 insignificant -0.0545448 4.2926e-01 insignificant 1.0000e+00 insignificant 0.90695 0.717480 0.18990088 7 0.90392 0.74978 0.1541332 3.3312e-10 0.9999995 weaklyHypermeth 5.5520e-08 1.0000 weaklyHypermeth 2.3476e-05 0.9999972 weaklyHypermeth 4.6951e-03 1 weaklyHypermeth 0.07817392 0.29888518 insignificant 1.000000 insignificant 0.930581 0.906440 0.0203171 9 0.894428 0.828358 0.0660707 1.0842e-01 0.654625 insignificant 1.0000e+00 1 insignificant 2.7442e-01 0.68494 insignificant 1.0000e+00 1 insignificant -0.00036456 9.9473e-01 insignificant 1.0000e+00 insignificant 0.937297 0.71748 0.2256104 7 0.93425 0.74978 0.184469 6.3429e-11 1.00000000 hypermethylated 6.3429e-08 1.00000 hypermethylated 2.2500e-06 0.9999999 hypermethylated 0.0011250 1 hypermethylated 0.1323542 0.070544 insignificant 1 insignificant 0.908636 0.717480 0.1855765 7 0.915819 0.74978 0.1660343 0.00020338 9.9993e-01 weaklyHypermeth 0.10169 1.0000e+00 insignificant 0.0022708 9.9996e-01 weaklyHypermeth 0.75695 1.0000e+00 insignificant 0.1327187 1.0388e-01 insignificant 1.00000000 insignificant chr10 115173524 115174524 103854 TCF7L2 ENSG00000148737 0.92593 61 6 0.791775 216 6 0.64506 40 1 0.869444 75 6 0.94907 62 4 0.808859 115 6 0.52004 130 4 0.89214 113 6 0.743333 41 1 0.833333 7 0 0.93509 273 6 0.70000 11 1 0.784580 45 3 0.82963 26 4 0.894444 25 1 0.461538 13 1 NA 0 0 0.75379 55 3 0.979167 39 3 0.783761 83 6 0.865079 41 4 0.500000 4 0 0.904762 57 6 0.63810 43 4 0.752778 53 3 0.958454 262 6 0.854406 53 4 0.400000 11 1 0.84921 41 3 0.95470 222 6 0.940943 291 6 0.86334 148 6 0.025694 79 3 0.004386 120 3 0.000000 114 5 0.143939 29 3 0.017332 161 6 0.0070175 165 3 0.840057 174 4 0.86941 163 6 0.905159 79 6 1.000000 3 0 0.751261 99 6 1.00000 0.814159 0.70370 1.00000 0.944444 0.91176 0.85965 0.95745 0.960000 1.000000 0.86275 0.80000 1.000000 0.77778 0.866667 0.461538 NA 0.90909 1.000000 0.933333 0.888889 NA 1.000000 0.857143 0.800000 0.969072 0.793103 0.800000 0.94444 0.925000 0.927083 0.88372 0.020833 0.026316 NA 0.25000 0.000000 0.042105 0.9375000 0.800000 1.000000 1.000000 0.781250 0 0.86503 0.918434 -0.0505717 6 0.73004 0.78128 -0.0512436 0.988535 0.0307852 weaklyHypometh 1 1 insignificant 0.963989 0.1842777 insignificant 1 1.00000 insignificant 0.0046423 0.94090 lowCoverage 1 lowCoverage 0.86503 0.020958 0.8314139 6 0.73004 0.013359 0.716678 5.0291e-66 1.000000 hypermethylated 2.5145e-63 1 hypermethylated 8.6628e-14 1.00000 hypermethylated 8.6628e-11 1 hypermethylated 0.7617270 4.2929e-15 lowCoverage 4.2929e-12 lowCoverage 0.86625 0.876448 -0.00034715 6 0.85171 0.85963 -0.0079184 3.9490e-01 0.6333495 insignificant 1.0000e+00 1.0000 insignificant 1.3344e-01 0.8116223 insignificant 1.0000e+00 1 insignificant -0.07838916 0.16105580 lowCoverage 1.000000 lowCoverage 0.918434 0.020958 0.8835081 6 0.781281 0.013359 0.7679217 1.2222e-59 1.000000 hypermethylated 1.2222e-56 1 hypermethylated 1.7981e-12 1.00000 hypermethylated 1.7981e-09 1 hypermethylated 0.75708472 2.2149e-09 lowCoverage 2.2149e-06 lowCoverage 0.920687 0.87645 0.0494848 6 0.91149 0.85963 0.051866 2.2260e-03 0.98320293 weaklyHypermeth 1.2367e-01 1.00000 insignificant 9.3652e-03 0.9078614 weaklyHypermeth 0.6243451 1 insignificant -0.0830315 0.234026 lowCoverage 1 lowCoverage 0.020990 0.876448 -0.8374998 6 0.015586 0.85963 -0.8440428 1.00000000 8.4928e-36 hypomethylated 1.00000 6.3568e-33 hypomethylated 1.0000000 7.3147e-09 hypomethylated 1.00000 7.1328e-06 hypomethylated -0.8401162 1.0668e-06 lowCoverage 0.00035559 lowCoverage chr10 118381906 118382906 104105 PNLIPRP2 ENSG00000165862 0.78238 399 6 0.83102 437 6 0.68927 70 5 0.92659 294 5 0.69524 32 2 0.92796 515 6 0.66498 67 5 0.81028 206 6 0.78571 73 5 0.78571 41 2 0.77518 342 6 0.55556 9 0 0.94771 108 6 0.94792 50 4 0.75731 57 6 0.37500 15 1 0.66667 4 0 0.92069 322 6 0.79776 284 6 0.92243 323 6 0.61746 44 5 0.83333 17 2 0.83763 150 6 0.95323 61 5 0.98148 29 2 0.93394 488 6 0.90069 129 6 0.75000 27 1 0.79772 197 5 0.80688 408 6 0.91668 411 5 0.89821 272 5 0.77242 264 6 0.778342 211 6 0.24348 321 5 0.88333 10 0 0.61507 156 6 0.84295 357 5 0.77979 277 6 0.86767 332 6 0.82180 308 6 0.76515 211 6 0.91285 303 6 0.92193 0.85314 0.81264 0.93961 0.81149 0.92547 0.83547 0.94219 0.88793 0.96983 0.91775 0.88468 0.92642 0.92139 0.83498 0.76313 0.91395 0.93304 0.93912 0.92200 0.84636 0.87931 0.92220 0.98420 0.97893 0.93728 0.86795 0.89127 0.94556 0.93870 0.92289 0.89947 0.89433 0.811667 0.556109 0.87707 0.89723 0.88763 0.83687 0.89556 0.87424 0.92997 0.95320 0 0.88237 0.92253 -0.0311549 6 0.80679 0.82874 -0.0219525 0.65507474 0.035598 weaklyHypometh 1.00000 1 insignificant 0.77913 0.144444 insignificant 1 1 insignificant -0.0740029 0.10120 lowCoverage 1 lowCoverage 0.88237 0.74829 0.1696577 6 0.80679 0.49992 0.3068704 1.2663e-09 5.4054e-01 weaklyHypermeth 2.8781e-08 1.0000e+00 weaklyHypermeth 2.7115e-03 8.7988e-01 weaklyHypermeth 4.0470e-02 1.0000e+00 weaklyHypermeth 0.0890024 4.1544e-01 lowCoverage 1.00000000 lowCoverage 0.88237 0.80922 0.0635888 6 0.80679 0.76307 0.0437125 2.9704e-03 0.00038621 weaklyHypermeth 9.0011e-02 0.37904 weaklyHypermeth 9.5960e-02 0.4225363 insignificant 1.0000e+00 1 insignificant -0.05118414 0.24571466 lowCoverage 1.000000 lowCoverage 0.92253 0.74829 0.162673 6 0.82874 0.49992 0.328823 6.9819e-06 9.8631e-01 weaklyHypermeth 1.2694e-04 1.0000e+00 weaklyHypermeth 1.3952e-02 9.9878e-01 weaklyHypermeth 1.7440e-01 1.00000000 insignificant 1.6301e-01 1.5824e-01 lowCoverage 1.00000000 lowCoverage 0.92253 0.80922 0.0812728 6 0.82874 0.76307 0.0656649 5.8818e-04 1.1682e-01 weaklyHypermeth 2.3527e-02 1.0000000 weaklyHypermeth 9.0167e-02 0.627908 insignificant 1.0000e+00 1 insignificant 0.0228187 0.57999631 lowCoverage 1.000000 lowCoverage 0.74829 0.80922 -0.1170703 6 0.49992 0.76307 -0.2631580 9.4432e-01 1.6155e-02 weaklyHypometh 1.0000e+00 2.4112e-01 insignificant 8.8531e-01 8.3866e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.14018658 2.1417e-01 lowCoverage 1.0000000 lowCoverage chr10 119250443 119251443 104163 PDZD8 ENSG00000165650 0.84273 218 6 0.63991 244 6 0.75966 221 6 0.78108 215 6 0.69764 109 6 0.85973 409 6 0.80538 165 6 0.80988 276 6 0.85302 229 6 0.88046 177 6 0.83545 261 6 0.75068 60 5 0.84611 229 6 0.88441 193 6 0.86356 231 6 0.74280 156 6 0.81731 17 1 0.81491 265 6 0.76447 237 6 0.79680 244 6 0.77349 95 6 0.81920 142 6 0.86799 159 6 0.71350 107 6 0.88996 102 6 0.73166 254 6 0.78229 203 6 0.82860 135 6 0.82032 208 6 0.81538 290 6 0.81363 265 6 0.88120 246 6 0.89525 228 6 0.899952 132 6 0.61959 90 3 1.00000 31 4 0.93544 178 6 0.88730 259 6 0.69741 264 6 0.67075 238 6 0.68431 255 6 0.74779 245 6 0.67489 253 6 0.83192 0.66020 0.72025 0.72479 0.68153 0.84756 0.78725 0.77860 0.83328 0.85462 0.84472 0.71632 0.81192 0.85643 0.83929 0.66966 0.72095 0.78561 0.70964 0.76321 0.76052 0.73112 0.85161 0.81228 0.87695 0.83020 0.78698 0.81091 0.82786 0.77989 0.78009 0.87359 0.91198 0.886126 0.647890 1.00000 0.94400 0.86963 0.63629 0.58922 0.61134 0.71427 0.63839 6 0.80414 0.82412 -0.0236606 6 0.78694 0.74645 0.0404914 0.87547639 0.198426 insignificant 1.00000 1 insignificant 0.90580 0.131436 insignificant 1 1 insignificant -0.0091353 0.66906 insignificant 1 insignificant 0.80424 0.85839 -0.0564839 6 0.80698 0.86386 -0.0568735 6.9610e-01 3.4685e-05 weaklyHypometh 1.0000e+00 5.7809e-03 weaklyHypometh 9.9984e-01 1.1192e-06 weaklyHypometh 1.0000e+00 3.7306e-04 weaklyHypometh -0.0706235 2.5069e-01 insignificant 1.00000000 insignificant 0.80424 0.70199 0.1085675 6 0.80698 0.69309 0.1138893 6.9352e-08 0.68393728 weaklyHypermeth 3.4676e-06 1.00000 weaklyHypermeth 1.8791e-04 0.7895651 weaklyHypermeth 9.3953e-03 1 weaklyHypermeth 0.10726888 0.00010818 weaklyHypermeth 0.058498 weaklyHypermeth 0.82516 0.85839 -0.032321 6 0.82919 0.86386 -0.034669 3.6817e-01 3.1226e-05 weaklyHypometh 1.0000e+00 6.2453e-03 weaklyHypometh 9.9781e-01 1.8456e-04 weaklyHypometh 1.0000e+00 0.06152040 weaklyHypometh -6.1488e-02 3.1285e-01 insignificant 1.00000000 insignificant 0.82516 0.70199 0.1374295 6 0.82919 0.69309 0.1360938 5.5297e-07 9.3546e-01 weaklyHypermeth 3.2527e-05 1.0000000 weaklyHypermeth 1.6182e-03 0.930568 weaklyHypermeth 8.5167e-02 1 weaklyHypermeth 0.1164042 0.00009767 weaklyHypermeth 0.072789 weaklyHypermeth 0.85839 0.70199 0.1699557 6 0.86386 0.69309 0.1707629 2.2377e-08 9.3607e-01 weaklyHypermeth 5.5942e-06 1.0000e+00 weaklyHypermeth 4.9886e-06 9.9999e-01 weaklyHypermeth 2.4943e-03 1.0000e+00 weaklyHypermeth 0.17789236 1.9603e-02 weaklyHypermeth 0.4000624 insignificant chr10 120393148 120394148 104360 ENSG00000178029 0.98238 157 4 0.92490 269 6 0.76707 166 6 0.93042 187 4 0.89425 89 6 0.95675 237 4 0.83985 169 6 0.75053 178 6 0.76820 156 4 0.83400 160 4 0.78968 148 4 0.92583 115 4 0.96060 248 4 0.78889 123 4 0.95131 225 4 0.84028 23 3 0.00000 4 0 0.96710 233 2 0.76008 121 4 0.76963 159 4 0.71965 55 4 0.96159 112 4 0.90170 173 4 0.72370 85 5 0.93595 88 4 0.63633 262 4 0.96145 126 4 0.71971 90 4 0.96108 177 4 0.97103 292 6 0.96966 253 6 0.82418 149 4 0.76118 202 6 0.607008 83 4 0.47322 214 3 0.54971 78 4 0.77107 130 6 0.76270 210 6 0.93015 200 4 0.86215 193 4 0.96728 175 2 0.91250 124 2 0.97239 181 6 0.97120 0.91078 0.85114 0.94556 0.93445 0.91898 0.78253 0.91441 0.84563 0.91103 0.90224 0.83733 0.95396 0.95435 0.96647 0.92308 0.00000 0.92180 0.90123 0.92782 0.89917 0.90675 0.90431 0.79486 0.88462 0.89177 0.90221 0.98401 0.93464 0.95125 0.95847 0.89271 0.72816 0.571685 0.541470 0.85560 0.75197 0.75846 0.93183 0.95175 0.93579 0.98300 0.92251 2 0.90401 0.91783 -0.0139368 4 0.76122 0.82013 -0.0589104 0.98638702 0.133982 lowCoverage 1.00000 1 lowCoverage 0.93109 0.421269 lowCoverage 1 1 lowCoverage -0.0370819 0.53555 lowCoverage 1 lowCoverage 0.90515 0.70665 0.1715310 4 0.88809 0.71420 0.1738913 6.9384e-13 9.9702e-01 lowCoverage 2.5698e-11 1.0000e+00 lowCoverage 1.1470e-05 9.9886e-01 lowCoverage 4.4116e-04 1.0000e+00 lowCoverage 0.1659396 3.3725e-02 lowCoverage 0.48877209 lowCoverage 0.90401 0.94266 -0.0366190 2 0.76122 0.81998 -0.0587573 9.9972e-01 0.06347650 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9993e-01 0.0187815 lowCoverage 1.0000e+00 1 lowCoverage -0.10880555 0.04387144 lowCoverage 1.000000 lowCoverage 0.92026 0.70665 0.194573 6 0.92904 0.71420 0.214842 6.4465e-13 9.9983e-01 weaklyHypermeth 3.5814e-11 1.0000e+00 weaklyHypermeth 9.9908e-07 9.9918e-01 weaklyHypermeth 9.0826e-05 1.00000000 weaklyHypermeth 2.0302e-01 9.9213e-03 lowCoverage 0.18719355 lowCoverage 0.91783 0.94266 -0.0255483 2 0.82013 0.81998 0.0001531 9.7174e-01 1.4972e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.9751e-01 0.058938 lowCoverage 1.0000e+00 1 lowCoverage -0.0717236 0.10310029 lowCoverage 1.000000 lowCoverage 0.70665 0.94374 -0.2164595 2 0.71420 0.95664 -0.2424414 9.9975e-01 3.2784e-08 lowCoverage 1.0000e+00 2.5218e-06 lowCoverage 9.9999e-01 2.6541e-05 lowCoverage 1.0000e+00 2.7961e-03 lowCoverage -0.27474514 2.2970e-03 lowCoverage 0.0850734 lowCoverage chr10 120621319 120622319 104372 ENSG00000217638 0.77698 76 7 0.80221 335 7 0.81653 58 4 0.80908 108 3 0.80568 48 3 0.82473 164 7 0.84861 76 5 0.74373 75 7 0.67477 39 5 0.75000 25 3 0.81013 251 7 0.62500 26 1 0.81250 34 3 0.87500 36 3 0.65034 38 3 0.65833 31 3 0.66667 344 3 0.74306 42 3 0.80655 66 6 0.74074 99 7 0.82589 22 1 1.00000 3 0 0.76703 67 7 0.71795 51 3 0.78947 56 3 0.78920 194 7 0.77381 17 0 0.65104 33 4 0.59683 50 5 0.82593 185 7 0.78958 147 7 0.77516 145 7 0.75340 90 7 0.659341 51 3 0.67591 317 7 0.89286 17 1 0.74418 150 7 0.79841 142 7 0.77997 197 5 0.81535 182 7 0.79152 197 5 0.60000 18 1 0.90311 175 5 0.87083 0.80526 0.83456 0.79854 0.77163 0.85289 0.82986 0.76061 0.76277 0.80208 0.83185 0.73698 0.88021 0.90885 0.69603 0.77431 0.87141 0.86690 0.85156 0.85417 0.82143 0.88048 0.81699 0.85737 0.86842 0.80931 0.72396 0.59896 0.74679 0.84508 0.82773 0.84953 0.77976 0.631410 0.825796 0.61789 0.77819 0.76058 0.85719 0.86776 0.87206 0.76350 0.91690 0 0.86237 0.83711 0.0058288 7 0.79663 0.77437 0.0222583 0.25293663 0.916955 insignificant 1.00000 1 insignificant 0.29164 0.925230 insignificant 1 1 insignificant -0.0131266 0.69324 lowCoverage 1 lowCoverage 0.86253 0.82008 0.0810511 7 0.79615 0.70727 0.0888827 2.7636e-04 2.8409e-01 weaklyHypermeth 3.3296e-03 1.0000e+00 weaklyHypermeth 1.3586e-02 5.2439e-01 weaklyHypermeth 1.5616e-01 1.0000e+00 insignificant 0.0080146 8.4048e-01 lowCoverage 1.00000000 lowCoverage 0.86237 0.93368 -0.0100625 5 0.79663 0.77280 0.0238351 5.8447e-01 0.48234251 insignificant 1.0000e+00 1.00000 insignificant 3.4512e-01 0.5685078 insignificant 1.0000e+00 1 insignificant -0.01595721 0.77176864 lowCoverage 1.000000 lowCoverage 0.83764 0.82008 0.079358 7 0.78976 0.70727 0.082492 7.6613e-03 1.1514e-01 weaklyHypermeth 7.4381e-02 1.0000e+00 weaklyHypermeth 1.1364e-01 2.8727e-01 insignificant 9.7963e-01 1.00000000 insignificant 2.1141e-02 6.4709e-01 lowCoverage 1.00000000 lowCoverage 0.83711 0.93368 -0.0146850 5 0.77437 0.77280 0.0015767 9.4098e-01 3.7821e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9465e-01 0.447224 insignificant 1.0000e+00 1 insignificant -0.0028306 0.96185584 lowCoverage 1.000000 lowCoverage 0.82008 0.93481 -0.0843940 5 0.70727 0.81177 -0.1044997 7.4094e-01 5.7034e-02 insignificant 1.0000e+00 6.6319e-01 insignificant 8.6612e-01 1.9674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02397182 7.0297e-01 lowCoverage 1.0000000 lowCoverage chr10 121062902 121063902 104387 ENSG00000211177,ENSG00000222283 0.89098 81 5 0.87712 77 5 0.95133 149 5 1.00000 54 5 0.93887 79 5 0.96556 216 5 0.95474 182 5 0.93800 114 5 0.97128 66 5 1.00000 44 5 0.97241 135 5 0.98571 43 5 0.87500 40 5 0.90667 35 5 0.85128 61 5 1.00000 73 5 NA 0 0 0.97212 66 4 0.97333 66 5 0.94245 174 5 0.88571 32 4 1.00000 4 0 0.92063 46 5 0.97333 65 5 0.60000 5 0 0.92842 159 5 0.92528 56 5 1.00000 20 0 0.95000 64 5 0.96417 147 5 0.89017 115 5 0.94953 153 5 0.92308 72 5 0.975000 74 5 1.00000 174 5 1.00000 4 0 0.93352 109 5 0.95813 130 5 0.97222 172 5 0.95623 141 5 0.98667 63 4 0.95556 13 1 0.95048 97 5 0.90075 0.79010 0.93692 1.00000 0.95298 0.95427 0.93634 0.93692 0.96252 1.00000 0.97878 0.97253 0.87500 0.91282 0.86785 1.00000 NA 0.97855 0.97949 0.94390 0.91209 NA 0.91331 0.97949 0.69231 0.90850 0.92810 1.00000 0.90385 0.95146 0.85782 0.94387 0.94083 0.980769 1.000000 1.00000 0.94886 0.96779 0.97863 0.95954 0.98974 0.91453 0.96190 0 0.95157 0.94226 0.0095878 5 0.95091 0.94022 0.0106862 0.30919261 0.848341 insignificant 1.00000 1 insignificant 0.72469 0.537271 insignificant 1 1 insignificant 0.0300198 0.36938 lowCoverage 1 lowCoverage 0.95157 0.96092 -0.0099725 5 0.95091 0.96480 -0.0138926 8.4629e-01 6.9361e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8044e-01 2.4202e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0193291 2.7625e-01 lowCoverage 1.00000000 lowCoverage 0.95157 0.96091 -0.0091219 5 0.95091 0.96080 -0.0098934 2.4729e-01 0.18204138 insignificant 1.0000e+00 1.00000 insignificant 8.8275e-01 0.1137663 insignificant 1.0000e+00 1 insignificant -0.01860485 0.14802728 lowCoverage 1.000000 lowCoverage 0.94226 0.96092 -0.020548 5 0.94022 0.96480 -0.024579 8.4997e-01 4.2935e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6034e-01 4.8629e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -4.9349e-02 1.6098e-01 lowCoverage 1.00000000 lowCoverage 0.94226 0.96091 -0.0181918 5 0.94022 0.96080 -0.0205796 8.8493e-01 1.9290e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7247e-01 0.271843 insignificant 1.0000e+00 1 insignificant -0.0486247 0.14668298 lowCoverage 1.000000 lowCoverage 0.96092 0.96091 0.0010637 5 0.96480 0.96080 0.0039992 6.9616e-02 6.0618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1354e-01 6.9643e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00072427 9.6262e-01 lowCoverage 1.0000000 lowCoverage chr10 121142194 121143194 104390 ENSG00000211177,ENSG00000222283 0.80588 190 6 0.55254 131 8 0.74500 83 9 0.63889 104 7 0.77778 24 3 0.64623 177 8 0.74158 105 6 0.49851 83 10 0.60462 68 9 0.81646 65 6 0.72926 290 11 0.68272 71 5 0.43844 200 10 NA 0 0 0.53567 122 6 0.76389 36 3 0.33595 56 4 0.66437 131 7 0.44442 154 10 0.56304 180 8 0.78626 72 7 0.24523 80 6 0.67504 122 6 0.68642 55 7 0.55007 70 7 0.64711 187 11 0.80956 80 10 0.61429 38 5 0.63074 81 9 0.64357 203 11 0.55425 235 10 0.80524 298 10 0.88855 66 7 0.823060 223 10 0.89286 73 4 0.95525 109 6 0.70432 41 5 0.88603 189 10 0.33982 166 8 0.64715 238 10 0.43157 171 7 0.40395 213 9 0.40796 148 7 0.62901 0.41593 0.74317 0.65730 0.59688 0.72584 0.75004 0.28232 0.55202 0.66724 0.69937 0.74214 0.25386 NA 0.47623 0.67128 0.20276 0.69925 0.21804 0.48677 0.93234 0.37593 0.71210 0.64353 0.56983 0.45171 0.71452 0.57595 0.52318 0.45939 0.35703 0.86957 0.80384 0.821480 0.818141 0.92524 0.75734 0.95077 0.21182 0.48326 0.33533 0.48194 0.43106 2 0.60617 0.67258 -0.0498546 8 0.65263 0.68985 -0.0372209 0.97918192 0.105845 insignificant 1.00000 1 insignificant 0.80663 0.513699 insignificant 1 1 insignificant -0.0065123 0.90502 insignificant 1 insignificant 0.60617 0.88160 -0.2552393 7 0.65263 0.86844 -0.2158148 9.9966e-01 2.8890e-16 hypomethylated 1.0000e+00 1.4445e-13 hypomethylated 1.0000e+00 5.9999e-10 hypomethylated 1.0000e+00 5.8259e-07 hypomethylated -0.2275440 2.8899e-04 hypomethylated 0.01313611 hypomethylated 0.60617 0.41026 0.1769822 7 0.65263 0.49005 0.1625769 5.4222e-08 0.99967839 weaklyHypermeth 2.8538e-06 1.00000 weaklyHypermeth 8.4263e-05 0.9997532 weaklyHypermeth 5.0834e-03 1 weaklyHypermeth 0.18471062 0.01887808 weaklyHypermeth 0.632660 insignificant 0.67258 0.88160 -0.195001 9 0.68985 0.86844 -0.178594 9.9931e-01 3.4292e-10 weaklyHypometh 1.0000e+00 1.7146e-07 weaklyHypometh 1.0000e+00 4.7144e-07 weaklyHypometh 1.0000e+00 0.00023572 weaklyHypometh -2.2103e-01 1.2477e-03 weaklyHypometh 0.03898908 weaklyHypometh 0.67258 0.41026 0.2411166 7 0.68985 0.49005 0.1997978 1.7403e-09 9.9927e-01 hypermethylated 1.9337e-07 1.0000000 hypermethylated 1.7124e-04 0.997609 hypermethylated 1.2232e-02 1 hypermethylated 0.1912229 0.01928218 weaklyHypermeth 0.790603 insignificant 0.88160 0.41026 0.4653265 6 0.86844 0.49005 0.3783917 6.8948e-20 1.0000e+00 hypermethylated 6.8948e-17 1.0000e+00 hypermethylated 1.9983e-08 1.0000e+00 hypermethylated 1.9983e-05 1.0000e+00 hypermethylated 0.41225462 2.8468e-04 hypermethylated 0.0196699 hypermethylated chr10 123230615 123231615 104472 ENSG00000222979 0.74810 161 9 0.66891 238 6 0.47609 121 6 0.80582 95 5 0.69815 27 3 0.78857 222 7 0.57205 69 3 0.62930 91 3 0.64223 48 3 0.75298 55 3 0.64278 125 3 0.45833 22 3 0.89456 42 3 0.81169 41 3 0.60822 46 3 0.41270 26 3 0.64411 213 3 0.71874 161 5 0.72013 62 3 0.64303 140 6 0.67112 45 3 0.55802 49 4 0.76979 95 6 0.50000 71 4 0.65070 88 3 0.64535 183 6 0.54856 44 4 0.54697 43 4 0.61298 90 4 0.73828 220 5 0.71588 201 8 0.79180 169 8 0.68997 179 6 0.583333 36 3 0.61143 133 5 0.77009 45 3 0.56579 79 4 0.65450 169 6 0.56598 113 5 0.67247 94 5 0.74575 98 8 0.68200 110 5 0.77026 89 4 0.67737 0.66669 0.47885 0.73172 0.69811 0.69303 0.67081 0.68842 0.74617 0.81366 0.73812 0.61346 0.75514 0.72447 0.75280 0.55771 0.74212 0.76802 0.77041 0.64554 0.76268 0.56816 0.76316 0.70439 0.69778 0.64548 0.68495 0.59630 0.70633 0.67558 0.71575 0.65286 0.72748 0.576132 0.758519 0.69621 0.61322 0.75086 0.62667 0.76280 0.71208 0.66361 0.69936 3 0.71172 0.72034 -0.0064489 4 0.71505 0.71884 -0.0037870 0.26413288 0.249246 lowCoverage 1.00000 1 lowCoverage 0.13493 0.568926 lowCoverage 1 1 lowCoverage 0.0210361 0.59333 lowCoverage 1 lowCoverage 0.71172 0.66459 0.0154026 4 0.71505 0.64163 0.0734184 1.4205e-02 7.4449e-01 lowCoverage 1.2571e-01 1.0000e+00 lowCoverage 1.5179e-01 8.1290e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0209722 6.2145e-01 lowCoverage 1.00000000 lowCoverage 0.71172 0.68056 0.0302234 5 0.71505 0.66158 0.0534704 1.7384e-01 0.32647747 insignificant 1.0000e+00 1.00000 insignificant 4.6763e-01 0.3167802 insignificant 1.0000e+00 1 insignificant -0.02046987 0.65909983 lowCoverage 1.000000 lowCoverage 0.72034 0.66459 0.051180 5 0.71884 0.64163 0.077205 8.8322e-02 6.0781e-01 insignificant 7.3602e-01 1.0000e+00 insignificant 4.3287e-01 6.8371e-01 insignificant 1.0000e+00 1.00000000 insignificant -6.3842e-05 9.9880e-01 lowCoverage 1.00000000 lowCoverage 0.72034 0.68056 0.0437192 4 0.71884 0.66158 0.0572575 1.0346e-01 2.0246e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.2227e-01 0.175635 lowCoverage 1.0000e+00 1 lowCoverage -0.0415059 0.37986117 lowCoverage 1.000000 lowCoverage 0.66459 0.68056 0.0400278 4 0.64163 0.66158 -0.0199479 2.0909e-01 5.6999e-02 lowCoverage 1.0000e+00 6.6319e-01 lowCoverage 5.8664e-01 3.7175e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.04144209 4.0419e-01 lowCoverage 1.0000000 lowCoverage chr10 124526835 124527835 104509 ENSG00000176584 0.89610 326 7 0.87987 121 7 0.52411 104 7 0.90143 262 6 0.88639 42 6 0.92918 354 7 0.64437 67 6 0.86558 119 7 0.87260 87 7 0.96520 112 7 0.89938 206 7 0.90561 40 5 0.98056 161 7 0.96333 56 5 0.88213 148 7 0.94841 81 6 0.75556 32 3 0.82480 363 6 0.80102 104 7 0.88407 226 7 0.79134 68 6 0.86142 75 5 0.85161 140 7 0.92976 60 6 0.91877 71 5 0.88360 126 7 0.90668 103 7 0.90766 66 7 0.71830 78 6 0.93074 169 7 0.90629 107 7 0.90801 288 7 0.53522 156 7 0.407894 155 7 0.55556 65 4 0.57823 33 4 0.62159 92 7 0.49895 142 7 0.93158 351 7 0.78755 312 7 0.90709 324 7 0.91348 277 7 0.87102 275 7 0.89611 0.90726 0.51864 0.91217 0.89744 0.93051 0.76965 0.87105 0.86238 0.95243 0.90939 0.89740 0.97162 0.94144 0.87428 0.94096 0.81111 0.82355 0.79062 0.88542 0.91701 0.87850 0.85357 0.92396 0.93420 0.87819 0.92416 0.91984 0.71806 0.91896 0.91074 0.91736 0.59733 0.441756 0.522034 0.66102 0.68311 0.56442 0.93256 0.87891 0.90464 0.90818 0.88320 3 0.88306 0.90674 -0.0274561 7 0.86108 0.78741 0.0736700 0.79795216 0.113117 insignificant 1.00000 1 insignificant 0.65988 0.033715 weaklyHypometh 1 1 insignificant -0.0156966 0.61427 insignificant 1 insignificant 0.88323 0.48834 0.3913582 7 0.87695 0.47041 0.4065411 3.1461e-31 1.0000e+00 hypermethylated 3.9327e-29 1.0000e+00 hypermethylated 5.5132e-11 1.0000e+00 hypermethylated 1.3783e-08 1.0000e+00 hypermethylated 0.3275779 1.6832e-06 hypermethylated 0.00015302 hypermethylated 0.88310 0.89539 -0.0143825 7 0.87652 0.80667 0.0698452 9.5679e-01 0.49666749 insignificant 1.0000e+00 1.00000 insignificant 8.8053e-01 0.4727170 insignificant 1.0000e+00 1 insignificant -0.02165673 0.55394376 insignificant 1.000000 insignificant 0.90741 0.48834 0.418526 7 0.89990 0.47041 0.429490 1.1149e-27 1.0000e+00 hypermethylated 2.2299e-25 1.0000e+00 hypermethylated 7.6594e-10 1.0000e+00 hypermethylated 1.5319e-07 1.00000000 hypermethylated 3.4327e-01 5.0690e-06 hypermethylated 0.00034416 hypermethylated 0.90674 0.89597 0.0048734 7 0.78741 0.90751 -0.1200942 4.5566e-01 9.1531e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.3935e-01 0.751293 insignificant 1.0000e+00 1 insignificant -0.0059601 0.85450330 insignificant 1.000000 insignificant 0.48834 0.89583 -0.4114770 7 0.47041 0.89429 -0.4238830 1.0000e+00 1.0174e-13 hypomethylated 1.0000e+00 2.0347e-11 hypomethylated 1.0000e+00 3.7720e-08 hypomethylated 1.0000e+00 1.3164e-05 hypomethylated -0.34923465 1.0115e-05 hypomethylated 0.0016859 hypomethylated chr10 124526977 124527977 104510 ENSG00000176584 0.89610 326 7 0.87987 121 7 0.52411 104 7 0.90143 262 6 0.88639 42 6 0.92918 354 7 0.64437 67 6 0.86558 119 7 0.87260 87 7 0.96520 112 7 0.89938 206 7 0.90561 40 5 0.98056 161 7 0.96333 56 5 0.88213 148 7 0.94841 81 6 0.75556 32 3 0.82480 363 6 0.80102 104 7 0.88407 226 7 0.79134 68 6 0.86142 75 5 0.85161 140 7 0.92976 60 6 0.91877 71 5 0.88360 126 7 0.90668 103 7 0.90766 66 7 0.71830 78 6 0.93074 169 7 0.90629 107 7 0.90801 288 7 0.53522 156 7 0.407894 155 7 0.55556 65 4 0.57823 33 4 0.62159 92 7 0.49895 142 7 0.93158 351 7 0.78755 312 7 0.90709 324 7 0.91348 277 7 0.87102 275 7 0.89611 0.90726 0.51864 0.91217 0.89744 0.93051 0.76965 0.87105 0.86238 0.95243 0.90939 0.89740 0.97162 0.94144 0.87428 0.94096 0.81111 0.82355 0.79062 0.88542 0.91701 0.87850 0.85357 0.92396 0.93420 0.87819 0.92416 0.91984 0.71806 0.91896 0.91074 0.91736 0.59733 0.441756 0.522034 0.66102 0.68311 0.56442 0.93256 0.87891 0.90464 0.90818 0.88320 3 0.88306 0.90674 -0.0274561 7 0.86108 0.78741 0.0736700 0.79795216 0.113117 insignificant 1.00000 1 insignificant 0.65988 0.033715 weaklyHypometh 1 1 insignificant -0.0156966 0.61427 insignificant 1 insignificant 0.88323 0.48834 0.3913582 7 0.87695 0.47041 0.4065411 3.1461e-31 1.0000e+00 hypermethylated 3.9327e-29 1.0000e+00 hypermethylated 5.5132e-11 1.0000e+00 hypermethylated 1.3783e-08 1.0000e+00 hypermethylated 0.3275779 1.6832e-06 hypermethylated 0.00015302 hypermethylated 0.88310 0.89539 -0.0143825 7 0.87652 0.80667 0.0698452 9.5679e-01 0.49666749 insignificant 1.0000e+00 1.00000 insignificant 8.8053e-01 0.4727170 insignificant 1.0000e+00 1 insignificant -0.02165673 0.55394376 insignificant 1.000000 insignificant 0.90741 0.48834 0.418526 7 0.89990 0.47041 0.429490 1.1149e-27 1.0000e+00 hypermethylated 2.2299e-25 1.0000e+00 hypermethylated 7.6594e-10 1.0000e+00 hypermethylated 1.5319e-07 1.00000000 hypermethylated 3.4327e-01 5.0690e-06 hypermethylated 0.00034416 hypermethylated 0.90674 0.89597 0.0048734 7 0.78741 0.90751 -0.1200942 4.5566e-01 9.1531e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.3935e-01 0.751293 insignificant 1.0000e+00 1 insignificant -0.0059601 0.85450330 insignificant 1.000000 insignificant 0.48834 0.89583 -0.4114770 7 0.47041 0.89429 -0.4238830 1.0000e+00 1.0174e-13 hypomethylated 1.0000e+00 2.0347e-11 hypomethylated 1.0000e+00 3.7720e-08 hypomethylated 1.0000e+00 1.3164e-05 hypomethylated -0.34923465 1.0115e-05 hypomethylated 0.0016859 hypomethylated chr10 125241323 125242323 104592 ENSG00000216983 0.74830 49 7 0.63638 264 7 0.58770 45 7 0.61905 124 7 0.38095 30 3 0.65679 55 5 0.50000 84 7 0.72078 86 7 0.64286 30 3 0.80000 23 3 0.63854 187 7 0.39286 20 0 0.57143 11 0 1.00000 13 0 0.85714 14 0 0.75000 20 4 NA 0 0 0.83333 7 0 0.88889 18 3 0.14286 46 3 0.94792 37 4 1.00000 4 0 0.64286 40 3 0.51429 40 7 0.85010 92 7 0.70747 131 7 0.80442 43 6 0.50000 12 0 0.54375 27 1 0.57713 186 7 0.58572 192 7 0.69643 76 4 0.58744 198 7 0.332339 60 7 0.24451 188 7 0.54762 60 7 0.29394 141 7 0.71407 220 7 0.41043 108 7 0.48677 135 7 0.54915 156 7 NA 0 0 0.74545 190 7 0.75770 0.66765 0.63186 0.65775 0.47059 0.79439 0.54020 0.74445 0.69608 0.84118 0.66305 0.39706 0.61765 1.00000 0.85294 0.75706 NA 0.67298 0.70240 0.17647 0.93137 0.90945 0.63235 0.47843 0.84978 0.75702 0.78291 0.54961 0.56176 0.62329 0.65277 0.67279 0.60895 0.328184 0.302036 0.56373 0.30896 0.71991 0.47129 0.51852 0.62326 NA 0.76822 0 0.65098 0.70795 -0.0583733 7 0.54805 0.72170 -0.1736524 0.99762801 0.081678 insignificant 1.00000 1 insignificant 0.93979 0.332152 insignificant 1 1 insignificant -0.0465668 0.49507 lowCoverage 1 lowCoverage 0.65098 0.53979 0.1204963 7 0.54805 0.48512 0.0629251 3.2868e-03 9.8048e-01 weaklyHypermeth 3.3200e-02 1.0000e+00 weaklyHypermeth 1.2815e-03 9.9936e-01 weaklyHypermeth 2.2482e-02 1.0000e+00 weaklyHypermeth 0.1976201 5.5876e-02 lowCoverage 0.67217710 lowCoverage 0.65098 0.56463 0.0393841 7 0.54805 0.51182 0.0362275 3.3379e-01 0.89901891 insignificant 1.0000e+00 1.00000 insignificant 1.2960e-01 0.9950383 insignificant 1.0000e+00 1 insignificant 0.10298983 0.27394357 lowCoverage 1.000000 lowCoverage 0.70795 0.53979 0.178246 7 0.72170 0.48512 0.236577 3.5621e-04 9.9981e-01 weaklyHypermeth 4.2917e-03 1.0000e+00 weaklyHypermeth 1.1452e-04 1.0000e+00 weaklyHypermeth 3.3682e-03 1.00000000 weaklyHypermeth 2.4419e-01 2.5101e-02 lowCoverage 0.38617446 lowCoverage 0.70795 0.56463 0.0990706 7 0.72170 0.51182 0.2098799 4.0377e-02 9.9681e-01 weaklyHypermeth 7.9172e-01 1.0000000 insignificant 3.9882e-02 0.999689 weaklyHypermeth 1.0000e+00 1 insignificant 0.1495566 0.13485260 lowCoverage 1.000000 lowCoverage 0.53979 0.56463 -0.0646423 7 0.48512 0.51182 -0.0266976 9.7515e-01 3.4437e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8842e-01 2.9751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09463029 3.9593e-01 insignificant 1.0000000 insignificant chr10 125263265 125264265 104594 ENSG00000216983 0.61086 50 3 0.33748 147 6 0.39355 145 6 0.44112 87 4 0.55983 70 5 0.54348 186 6 0.26313 38 4 0.52261 96 6 0.47659 125 6 0.57031 56 5 0.57573 163 6 0.54167 50 4 0.28881 94 6 0.31154 33 2 0.57937 30 2 0.31667 35 5 0.56481 24 2 0.48416 115 5 0.51161 60 4 0.39201 112 6 0.37626 38 4 0.57475 30 4 0.51011 61 5 0.55692 100 6 0.43939 25 2 0.52771 120 6 0.47891 148 6 0.45635 88 6 0.49481 134 6 0.36565 251 6 0.44749 167 6 0.60088 159 6 0.42867 120 5 0.373231 66 4 0.20556 183 5 0.00000 6 0 0.44565 130 6 0.40685 175 6 0.40909 85 5 0.34067 103 5 0.61482 98 2 0.34693 70 3 0.19662 110 6 0.51026 0.31766 0.44107 0.41833 0.52255 0.57666 0.22897 0.50893 0.45860 0.46697 0.55418 0.49790 0.25155 0.39279 0.45841 0.40303 0.43996 0.48713 0.38269 0.35833 0.39425 0.47594 0.62469 0.45822 0.40539 0.36074 0.33364 0.49716 0.47403 0.34297 0.39480 0.52038 0.47751 0.338998 0.059596 0.13042 0.41110 0.51961 0.37741 0.31928 0.49373 0.32076 0.20886 2 0.50058 0.45950 0.0250754 5 0.46963 0.49052 -0.0208907 0.27273596 0.156457 insignificant 1.00000 1 insignificant 0.84191 0.370640 insignificant 1 1 insignificant -0.0215050 0.51817 lowCoverage 1 lowCoverage 0.50058 0.39265 0.1279912 5 0.46963 0.38794 0.0816940 1.1141e-03 5.3546e-01 weaklyHypermeth 1.2109e-02 1.0000e+00 weaklyHypermeth 2.1678e-02 8.5704e-01 weaklyHypermeth 2.2819e-01 1.0000e+00 insignificant 0.1542736 8.5429e-02 lowCoverage 0.93878062 lowCoverage 0.50058 0.30258 0.1440016 4 0.46963 0.34854 0.1210875 7.1868e-04 0.94274602 lowCoverage 2.4782e-02 1.00000 lowCoverage 3.4078e-02 0.8806646 lowCoverage 8.7381e-01 1 lowCoverage 0.08263909 0.30401177 lowCoverage 1.000000 lowCoverage 0.45950 0.39265 0.099511 6 0.49052 0.38794 0.102585 5.0544e-03 5.8263e-01 weaklyHypermeth 5.1055e-02 1.0000e+00 weaklyHypermeth 3.0927e-02 9.5803e-01 weaklyHypermeth 3.2861e-01 1.00000000 insignificant 1.7578e-01 5.6957e-02 lowCoverage 0.66228929 lowCoverage 0.45950 0.30258 0.0982532 4 0.49052 0.34854 0.1419782 1.7123e-03 7.4737e-01 lowCoverage 6.5856e-02 1.0000000 lowCoverage 5.1753e-02 0.821775 lowCoverage 1.0000e+00 1 lowCoverage 0.1041441 0.20549637 lowCoverage 1.000000 lowCoverage 0.39265 0.30258 0.0435474 4 0.38794 0.34854 0.0393935 3.6017e-01 7.4599e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4200e-01 7.0043e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07163448 4.8575e-01 lowCoverage 1.0000000 lowCoverage chr10 125935858 125936858 104607 CHST15 ENSG00000182022 0.95064 281 7 0.89283 417 7 0.88347 246 7 0.91592 244 7 0.90128 140 7 0.94002 389 7 0.91777 148 7 0.90008 275 7 0.86872 279 7 0.95035 197 5 0.88502 300 7 0.97136 131 5 0.88089 288 7 0.89261 183 7 0.93369 302 7 0.85648 99 4 0.92500 40 4 0.91511 290 6 0.93503 267 7 0.94444 301 7 0.86180 108 7 0.84676 94 5 0.91143 245 7 0.98585 125 7 0.90368 55 5 0.87669 342 7 0.80824 120 7 0.79607 210 8 0.87131 367 7 0.94381 456 7 0.89270 338 7 0.93306 290 7 0.71492 302 7 0.606871 93 4 0.84249 314 7 0.58333 14 0 0.52854 314 7 0.58505 308 7 0.83322 287 7 0.87196 219 7 0.93524 232 6 0.84742 228 6 0.87025 253 4 0.94398 0.92997 0.89019 0.92196 0.90545 0.91716 0.94654 0.93799 0.90605 0.94875 0.91249 0.94620 0.89091 0.92221 0.92881 0.85860 0.91736 0.90897 0.93624 0.96226 0.77362 0.86776 0.91169 0.98990 0.87408 0.91700 0.87920 0.92231 0.90389 0.94908 0.93552 0.93777 0.81799 0.661358 0.879368 0.58779 0.67715 0.90101 0.91161 0.89889 0.92941 0.89299 0.92433 4 0.92111 0.91345 0.0041710 7 0.92309 0.79348 0.1296075 0.72311212 0.905196 insignificant 1.00000 1 insignificant 0.47644 0.962826 insignificant 1 1 insignificant 0.0270846 0.13723 insignificant 1 insignificant 0.92111 0.73457 0.1676234 7 0.92309 0.59866 0.3244251 3.2627e-14 1.0000e+00 weaklyHypermeth 1.3594e-12 1.0000e+00 weaklyHypermeth 2.1639e-04 9.9947e-01 weaklyHypermeth 4.9179e-03 1.0000e+00 weaklyHypermeth 0.2695011 2.0642e-03 weaklyHypermeth 0.05897840 weaklyHypermeth 0.92111 0.91468 0.0109151 6 0.92309 0.88397 0.0391122 3.5846e-02 0.97728821 weaklyHypermeth 7.4679e-01 1.00000 insignificant 1.2172e-01 0.9743081 insignificant 1.0000e+00 1 insignificant 0.04141671 0.07546889 insignificant 1.000000 insignificant 0.91345 0.73457 0.170497 7 0.79348 0.59866 0.194818 3.8772e-09 1.0000e+00 weaklyHypermeth 1.2116e-07 1.0000e+00 weaklyHypermeth 1.2477e-03 9.9909e-01 weaklyHypermeth 2.4464e-02 1.00000000 weaklyHypermeth 2.4242e-01 2.5486e-03 weaklyHypermeth 0.06216189 weaklyHypermeth 0.91345 0.91468 0.0077123 6 0.79348 0.88397 -0.0904953 2.0862e-01 9.7897e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.3086e-01 0.940313 insignificant 1.0000e+00 1 insignificant 0.0143321 0.55611982 insignificant 1.000000 insignificant 0.73457 0.91468 -0.1418204 6 0.59866 0.88397 -0.2853129 9.9997e-01 9.6059e-04 weaklyHypometh 1.0000e+00 1.9741e-02 weaklyHypometh 9.9776e-01 1.9242e-02 weaklyHypometh 1.0000e+00 3.7004e-01 insignificant -0.22808438 3.4139e-03 weaklyHypometh 0.1101262 insignificant chr10 126891580 126892580 104648 ENSG00000214298 0.89906 165 6 0.50844 47 6 0.69630 55 6 0.96481 56 6 0.91111 27 4 0.95109 208 6 1.00000 16 0 0.85952 35 6 0.84722 29 4 0.87434 44 6 0.90291 131 6 0.52500 13 1 0.88706 137 6 NA 0 0 1.00000 19 2 0.00000 4 0 0.70635 26 2 0.66599 102 6 0.91857 66 6 0.87834 216 6 1.00000 48 6 0.44071 58 6 0.88188 58 6 1.00000 24 1 0.80357 29 2 0.80303 39 6 0.86397 52 6 0.91111 22 3 0.90893 46 6 0.94213 58 6 0.91667 58 6 0.93778 234 6 0.77328 92 6 0.750000 36 6 0.41010 217 4 0.95833 12 0 0.80952 55 6 0.78676 106 6 0.51691 87 6 0.67333 142 6 0.64521 111 6 0.62963 92 6 0.51397 100 6 0.90106 0.51664 0.67708 0.96389 0.91667 0.95092 1.00000 0.86205 0.82813 0.88219 0.90572 0.52813 0.89216 NA 1.00000 0.52312 0.71131 0.66043 0.91620 0.87483 1.00000 0.43720 0.88301 1.00000 0.78683 0.80966 0.86482 0.91667 0.90380 0.94184 0.91875 0.93870 0.77827 0.755208 0.579676 0.95312 0.80893 0.79696 0.53511 0.68351 0.65072 0.63021 0.51092 0 0.85960 0.87190 -0.0139406 6 0.85742 0.87257 -0.0151433 0.88285497 0.424796 insignificant 1.00000 1 insignificant 0.97422 0.263476 insignificant 1 1 insignificant -0.0782117 0.27158 lowCoverage 1 lowCoverage 0.85960 0.62355 0.2216961 6 0.85742 0.67462 0.1828091 3.7550e-11 9.7375e-01 hypermethylated 1.0729e-09 1.0000e+00 hypermethylated 7.6372e-02 9.2264e-01 insignificant 6.7586e-01 1.0000e+00 insignificant 0.0412693 6.6324e-01 lowCoverage 1.00000000 lowCoverage 0.85960 0.59962 0.2592683 6 0.85742 0.60696 0.2504648 5.3021e-16 0.99999922 hypermethylated 2.6510e-13 1.00000 hypermethylated 1.0126e-07 1.0000000 hypermethylated 3.3754e-05 1 hypermethylated 0.19345866 0.00685772 lowCoverage 0.469869 lowCoverage 0.87190 0.62355 0.223751 6 0.87257 0.67462 0.197952 1.1066e-07 9.8917e-01 hypermethylated 2.5150e-06 1.0000e+00 hypermethylated 5.2202e-02 9.8044e-01 insignificant 4.9716e-01 1.00000000 insignificant 1.1948e-01 1.9786e-01 lowCoverage 1.00000000 lowCoverage 0.87190 0.59962 0.2639572 6 0.87257 0.60696 0.2656081 2.6901e-12 1.0000e+00 hypermethylated 8.9672e-10 1.0000000 hypermethylated 1.4936e-08 1.000000 hypermethylated 1.4936e-05 1 hypermethylated 0.2716704 0.00019430 hypermethylated 0.072789 hypermethylated 0.62355 0.59962 0.0464162 6 0.67462 0.60696 0.0676557 9.3928e-02 9.6497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8172e-03 9.9998e-01 weaklyHypermeth 3.6343e-01 1.0000e+00 insignificant 0.15218936 1.0386e-01 lowCoverage 1.0000000 lowCoverage chr10 126904047 126905047 104650 ENSG00000214298 0.86757 122 6 0.85413 118 6 0.75000 21 3 0.91823 107 6 0.81548 29 4 0.94106 149 6 0.84722 24 1 0.84075 85 6 0.96296 36 6 0.99167 44 3 0.97768 125 6 1.00000 4 0 0.98611 79 3 0.91667 9 0 0.69444 19 1 1.00000 2 0 0.88889 5 0 0.75996 88 3 0.93827 36 1 0.96630 105 6 0.88996 68 6 0.89033 39 3 0.89652 54 6 0.75000 31 1 0.88512 105 6 0.97222 139 6 0.78386 96 6 1.00000 7 1 0.63527 62 3 0.93759 162 6 0.90815 158 6 0.94972 112 6 0.75141 75 6 0.857143 88 6 0.75000 86 4 0.96875 17 1 0.86349 38 5 0.93329 147 6 0.84853 54 3 0.96928 140 6 0.90833 114 5 0.86928 22 1 0.88847 108 6 0.85688 0.77754 0.96296 0.95726 0.88426 0.95458 0.82716 0.88535 0.79424 0.95370 0.96491 1.00000 0.92284 0.68168 0.96605 0.90019 0.69136 0.90139 0.95336 0.97437 0.88359 0.77617 0.80606 0.98694 0.98663 0.91406 0.88786 0.98694 0.97370 0.95806 0.95113 0.94961 0.83236 0.811287 0.989896 0.87415 0.98942 0.98813 0.94553 0.92191 0.89074 0.93319 0.96964 0 0.90879 0.91675 -0.0062561 6 0.90853 0.90203 0.0065013 0.63390220 0.605748 insignificant 1.00000 1 insignificant 0.30417 0.742960 insignificant 1 1 insignificant 0.0209748 0.56728 lowCoverage 1 lowCoverage 0.90804 0.86918 0.0289004 6 0.77874 0.86353 -0.0847941 1.0788e-02 8.1064e-01 weaklyHypermeth 1.0374e-01 1.0000e+00 insignificant 3.0146e-02 7.1712e-01 weaklyHypermeth 3.0146e-01 1.0000e+00 insignificant 0.0418555 3.4815e-01 lowCoverage 1.00000000 lowCoverage 0.90879 0.91781 -0.0070349 6 0.90853 0.90636 0.0021727 1.6308e-01 0.48410443 insignificant 1.0000e+00 1.00000 insignificant 1.8995e-01 0.7633715 insignificant 1.0000e+00 1 insignificant -0.00090955 0.97536412 lowCoverage 1.000000 lowCoverage 0.91675 0.86889 0.045908 6 0.90203 0.84079 0.061239 1.2079e-01 6.2010e-01 insignificant 9.5865e-01 1.0000e+00 insignificant 1.0116e-01 7.3666e-01 insignificant 8.7968e-01 1.00000000 insignificant 2.0881e-02 6.6851e-01 lowCoverage 1.00000000 lowCoverage 0.91675 0.91781 0.0044745 6 0.90203 0.90636 -0.0043287 4.6462e-01 3.3886e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.5179e-01 0.585556 insignificant 1.0000e+00 1 insignificant -0.0218843 0.55636186 lowCoverage 1.000000 lowCoverage 0.86889 0.91781 -0.0367912 6 0.84079 0.90636 -0.0655676 7.8527e-01 2.0309e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2054e-01 2.8717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04276506 3.4292e-01 lowCoverage 1.0000000 lowCoverage chr10 128385351 128386351 104730 ENSG00000221717 0.73092 77 6 0.59813 143 7 0.50595 40 2 0.63163 59 4 0.62698 28 3 0.86952 105 5 0.70198 45 4 0.73036 36 4 0.28922 29 2 0.67330 46 2 0.70237 127 7 0.56471 23 2 0.52762 49 2 0.50000 2 0 0.48889 24 2 0.74519 21 1 0.36429 17 2 0.54286 20 1 0.74845 42 2 0.74970 66 6 0.53375 41 2 0.12500 5 0 0.81815 84 6 0.73225 59 5 0.83333 18 2 0.79762 73 6 0.76974 35 2 0.74603 14 2 0.59059 45 4 0.75653 91 7 0.64777 113 7 0.71179 89 6 0.50136 116 6 0.419516 45 4 0.81500 229 4 0.61905 45 4 0.52852 68 6 0.84732 98 6 0.69424 69 6 0.69892 85 6 0.80720 83 4 0.37500 14 1 0.85240 82 4 0.33036 0.43750 0.30729 0.62500 0.42262 0.71667 0.16389 0.29688 0.25858 0.25923 0.37769 0.36029 0.29881 NA 0.47778 0.55529 0.34821 0.37500 0.51398 0.40021 0.33901 0.31433 0.29697 0.33479 NA 0.50000 0.54934 0.63095 0.19118 0.39359 0.33391 0.34375 0.67500 0.496795 0.842977 0.62500 0.81960 0.69573 0.23884 0.43517 0.75000 0.34375 0.58333 0 0.61461 0.60725 -0.0284997 4 0.63460 0.69968 -0.0650779 0.97825097 0.039352 lowCoverage 1.00000 1 lowCoverage 0.84555 0.156020 lowCoverage 1 1 lowCoverage -0.0572752 0.38703 lowCoverage 1 lowCoverage 0.61384 0.64167 -0.0268936 4 0.58892 0.58475 0.0041738 4.5711e-05 2.1469e-03 lowCoverage 6.1772e-04 2.6836e-01 lowCoverage 5.5159e-03 8.4137e-02 lowCoverage 7.0717e-02 1.0000e+00 lowCoverage -0.0071902 9.2918e-01 lowCoverage 1.00000000 lowCoverage 0.61508 0.77108 -0.0499553 4 0.67306 0.72948 -0.0564199 9.1978e-01 0.05438081 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.7099e-01 0.1944589 lowCoverage 1.0000e+00 1 lowCoverage -0.07094700 0.46180469 lowCoverage 1.000000 lowCoverage 0.60817 0.64060 -0.035214 4 0.75523 0.51978 0.235455 2.7693e-06 1.8195e-02 lowCoverage 5.6516e-05 1.0000e+00 lowCoverage 2.6133e-03 2.5017e-01 lowCoverage 4.3555e-02 1.00000000 lowCoverage 5.0085e-02 5.9174e-01 lowCoverage 1.00000000 lowCoverage 0.60790 0.77177 -0.0159168 4 0.75589 0.76329 -0.0074047 9.0697e-01 7.6038e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.8958e-01 0.933137 lowCoverage 1.0000e+00 1 lowCoverage -0.0136718 0.89530938 lowCoverage 1.000000 lowCoverage 0.64489 0.77108 -0.1128566 6 0.66829 0.72948 -0.0611899 1.4708e-01 7.5160e-04 weaklyHypometh 1.0000e+00 1.6339e-02 weaklyHypometh 6.2161e-01 3.2039e-02 weaklyHypometh 1.0000e+00 5.0856e-01 insignificant -0.06375677 5.7654e-01 lowCoverage 1.0000000 lowCoverage chr10 129024221 129025221 104759 FAM196A ENSG00000188916 0.94524 166 5 0.91135 310 5 0.94573 56 5 0.93993 237 5 0.87628 53 5 0.95604 164 5 0.94750 62 5 0.98947 60 3 0.94737 55 3 0.96667 22 3 0.95332 231 5 0.92000 17 3 1.00000 33 3 0.98000 34 3 1.00000 36 3 1.00000 20 3 1.00000 139 2 0.92906 143 5 0.93333 13 0 0.96661 130 5 1.00000 10 0 0.83333 7 0 0.90173 79 5 0.91250 57 3 0.95252 255 5 0.95410 172 5 0.75000 32 3 0.54545 30 3 0.97500 18 2 0.96490 184 5 0.93181 191 5 0.93903 170 5 0.98919 156 5 0.991304 78 3 1.00000 282 5 1.00000 154 5 0.98210 155 5 0.96193 235 5 0.97876 225 5 0.98144 156 5 0.99130 341 5 0.95833 23 3 0.97194 214 5 0.96061 0.91226 0.94894 0.95219 0.85001 0.97079 0.92526 0.98604 0.94066 0.94218 0.95068 0.87755 1.00000 0.96531 0.99544 1.00000 0.95454 0.92706 0.99320 0.94689 1.00000 0.84182 0.92636 0.88393 0.95112 0.95356 0.89506 0.78293 0.98724 0.94649 0.93550 0.92889 0.98566 0.988465 1.000000 1.00000 0.97507 0.96031 0.97039 0.97538 0.98846 0.96617 0.97522 0 0.94750 0.94025 0.0071121 5 0.94752 0.94090 0.0066150 0.40226187 0.860949 insignificant 1.00000 1 insignificant 0.16593 0.854486 insignificant 1 1 insignificant 0.0670303 0.10010 lowCoverage 1 lowCoverage 0.94750 0.98585 -0.0383349 5 0.94752 0.98611 -0.0385886 9.9979e-01 4.0718e-04 weaklyHypometh 1.0000e+00 5.8169e-02 weaklyHypometh 9.7600e-01 3.1508e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0320248 2.8697e-03 lowCoverage 0.07551789 lowCoverage 0.94750 0.98019 -0.0317559 5 0.94752 0.98070 -0.0331790 9.8287e-01 0.00611403 weaklyHypometh 1.0000e+00 1.00000 insignificant 4.5102e-01 0.0959152 insignificant 1.0000e+00 1 insignificant -0.02095963 0.03550895 lowCoverage 1.000000 lowCoverage 0.94025 0.98585 -0.045518 5 0.94090 0.98611 -0.045204 9.9902e-01 1.9844e-04 weaklyHypometh 1.0000e+00 3.3073e-02 weaklyHypometh 9.9908e-01 1.7378e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -9.9055e-02 2.1586e-02 lowCoverage 0.34815592 lowCoverage 0.94025 0.98019 -0.0380873 5 0.94090 0.98070 -0.0397940 9.9512e-01 7.7676e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant 7.5760e-01 0.073088 insignificant 1.0000e+00 1 insignificant -0.0879900 0.03680871 lowCoverage 1.000000 lowCoverage 0.98585 0.98019 0.0067636 5 0.98611 0.98070 0.0054096 1.1616e-01 6.2530e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7865e-01 8.5678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01106513 1.9920e-01 lowCoverage 1.0000000 lowCoverage chr10 129248632 129249632 104768 NPS ENSG00000214285 NA 0 0 0.87704 180 5 NA 0 0 NA 0 0 0.95147 60 5 0.96916 178 5 0.80238 72 5 NA 0 0 0.82046 66 5 0.92000 70 5 1.00000 11 0 1.00000 8 0 0.93619 107 5 NA 0 0 0.96111 90 5 NA 0 0 NA 0 0 NA 0 0 0.94632 121 5 0.96271 257 5 NA 0 0 0.50000 7 0 NA 0 0 0.00000 1 0 NA 0 0 0.97096 103 4 NA 0 0 1.00000 2 0 NA 0 0 0.96894 176 5 NA 0 0 1.00000 3 0 NA 0 0 NA 0 0 0.86813 336 4 NA 0 0 0.88095 21 3 NA 0 0 NA 0 0 0.96736 208 5 NA 0 0 0.94135 134 5 NA 0 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.93115 0.95890 -0.0254665 2 0.92521 0.94703 -0.0218161 0.93369587 0.150732 lowCoverage 1.00000 1 lowCoverage 0.65926 0.287097 lowCoverage 1 1 lowCoverage 0.1889209 0.31320 lowCoverage 1 lowCoverage 0.93876 0.85714 0.0430753 3 0.93508 0.86902 0.0660680 1.2103e-02 9.7557e-02 lowCoverage 1.1048e-01 1.0000e+00 lowCoverage 3.6349e-01 2.6253e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0543615 1.6975e-02 lowCoverage 0.30312239 lowCoverage 0.93115 0.96491 -0.0336895 5 0.92521 0.95742 -0.0322131 8.4722e-01 0.18648722 insignificant 1.0000e+00 1.00000 insignificant 8.6530e-01 0.3695054 insignificant 1.0000e+00 1 insignificant -0.02545083 0.29959582 lowCoverage 1.000000 lowCoverage 0.96935 0.85714 0.053801 2 0.96604 0.86902 0.097025 1.7579e-01 6.4029e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3944e-01 4.7815e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -1.3456e-01 4.5958e-01 lowCoverage 1.00000000 lowCoverage 0.95890 0.96491 -0.0040546 2 0.94703 0.95742 -0.0103970 6.1846e-01 6.9174e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.6687e-01 0.590628 lowCoverage 1.0000e+00 1 lowCoverage -0.2143717 0.25849425 lowCoverage 1.000000 lowCoverage 0.85714 0.96552 -0.0732063 3 0.86902 0.95639 -0.0873784 1.3912e-01 1.6467e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.7643e-01 8.0194e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07981229 5.9953e-02 lowCoverage 0.8948138 lowCoverage chr10 129953053 129954053 104783 MKI67 ENSG00000148773 0.87880 289 5 0.52000 25 5 0.81429 70 5 0.88612 185 5 0.91061 59 5 0.76756 139 5 0.77333 23 4 0.91261 92 5 0.75000 20 0 0.96536 86 5 0.96479 117 5 1.00000 5 0 0.97143 70 5 0.95385 65 5 0.93420 106 5 0.44176 66 5 NA 0 0 0.85922 572 5 0.86644 149 5 0.87361 221 5 0.81340 108 5 0.88600 124 5 0.74609 166 5 0.96364 53 5 1.00000 15 0 0.80000 30 5 0.74630 140 5 1.00000 23 3 0.50487 147 5 0.94286 34 5 0.94000 50 5 0.74815 135 5 0.35200 128 5 0.067679 367 5 0.16000 25 5 NA 0 0 0.28151 39 5 0.20816 241 5 0.94545 170 5 0.88374 206 5 0.96669 389 5 0.98214 564 5 0.92462 199 5 0.88267 0.52449 0.80904 0.88959 0.90507 0.76871 0.77823 0.91348 0.75000 0.96632 0.96542 1.00000 0.96939 0.95604 0.93970 0.44819 NA 0.85892 0.86206 0.87371 0.81870 0.89224 0.74474 0.96289 1.00000 0.79592 0.74979 1.00000 0.50577 0.93878 0.94082 0.75057 0.35898 0.067267 0.171429 NA 0.28445 0.20858 0.94873 0.88539 0.96590 0.98269 0.92410 0 0.86604 0.77463 0.0901313 5 0.86492 0.77455 0.0903782 0.00021510 0.999995 weaklyHypermeth 0.21510 1 insignificant 0.67248 0.743629 insignificant 1 1 insignificant 0.0034774 0.94892 lowCoverage 1 lowCoverage 0.86604 0.16875 0.6976786 5 0.86492 0.16864 0.6962842 1.3780e-45 1.0000e+00 hypermethylated 4.5935e-43 1.0000e+00 hypermethylated 2.0360e-11 1.0000e+00 hypermethylated 1.0180e-08 1.0000e+00 hypermethylated 0.6305493 4.1374e-06 lowCoverage 0.00031826 lowCoverage 0.86604 0.95353 -0.0878152 5 0.86492 0.95357 -0.0886423 9.9999e-01 0.00075808 weaklyHypometh 1.0000e+00 0.37904 insignificant 9.9892e-01 0.0065028 weaklyHypometh 1.0000e+00 1 insignificant -0.09610965 0.01897980 lowCoverage 0.632660 lowCoverage 0.77463 0.16875 0.605166 5 0.77455 0.16864 0.605906 3.5394e-24 1.0000e+00 hypermethylated 4.4242e-22 1.0000e+00 hypermethylated 5.3291e-10 1.0000e+00 hypermethylated 1.5319e-07 1.00000000 hypermethylated 6.2707e-01 2.0097e-06 lowCoverage 0.00020097 lowCoverage 0.77463 0.95353 -0.1790189 5 0.77455 0.95357 -0.1790205 1.0000e+00 2.4551e-06 weaklyHypometh 1.0000e+00 0.0024551 weaklyHypometh 9.8800e-01 0.110113 insignificant 1.0000e+00 1 insignificant -0.0995870 0.04462013 lowCoverage 1.000000 lowCoverage 0.16875 0.95353 -0.7847949 5 0.16864 0.95357 -0.7849265 1.0000e+00 6.4771e-23 hypomethylated 1.0000e+00 6.4771e-20 hypomethylated 1.0000e+00 3.9491e-08 hypomethylated 1.0000e+00 1.3164e-05 hypomethylated -0.72665895 3.4796e-05 lowCoverage 0.0038662 lowCoverage chr10 130013714 130014714 104794 MKI67 ENSG00000148773 0.89900 424 7 0.88611 231 7 0.79574 115 7 0.93202 360 7 0.94643 55 3 0.94952 402 7 0.90723 78 7 0.91237 217 7 0.89207 106 5 0.92163 132 7 0.95371 281 7 0.79932 28 3 0.94897 245 7 0.71591 44 3 0.91598 156 7 0.75000 4 0 0.78571 13 0 0.57338 387 7 0.96762 173 7 0.90670 332 7 0.83631 71 6 0.63792 153 7 0.83592 165 7 0.76190 70 3 0.68767 82 7 0.90996 387 7 0.88741 112 6 0.75160 31 1 0.88782 250 7 0.96778 405 7 0.93978 372 7 0.95079 359 7 0.79465 337 7 0.426151 228 7 0.12727 245 5 0.29459 72 7 0.55327 116 7 0.34603 382 7 0.72267 379 7 0.63083 418 7 0.79138 304 7 0.70620 367 7 0.77103 455 7 0.90639 0.89046 0.84801 0.93358 0.91566 0.93359 0.89112 0.91036 0.86866 0.91036 0.94390 0.76190 0.93606 0.93921 0.91424 0.72828 0.87651 0.57657 0.96032 0.90628 0.96328 0.61627 0.82882 0.88855 0.74479 0.89712 0.91277 0.90825 0.88274 0.97320 0.90494 0.94225 0.80230 0.440966 0.287514 0.26220 0.64544 0.33186 0.66558 0.55793 0.78433 0.68492 0.75442 3 0.87946 0.89988 -0.0200510 7 0.83324 0.84988 -0.0166353 0.96480448 0.306479 insignificant 1.00000 1 insignificant 0.19777 0.855750 insignificant 1 1 insignificant 0.0300666 0.44009 insignificant 1 insignificant 0.87946 0.46884 0.4067564 7 0.83324 0.40895 0.4242925 8.7480e-21 1.0000e+00 hypermethylated 6.7292e-19 1.0000e+00 hypermethylated 4.9041e-12 1.0000e+00 hypermethylated 4.9041e-09 1.0000e+00 hypermethylated 0.4443132 4.4350e-03 weaklyHypermeth 0.10079455 insignificant 0.87966 0.70723 0.1756103 7 0.88085 0.71837 0.1624779 1.1562e-10 0.99999981 weaklyHypermeth 8.2585e-09 1.00000 weaklyHypermeth 2.5130e-09 1.0000000 weaklyHypermeth 2.5130e-06 1 weaklyHypermeth 0.14355120 0.00259097 weaklyHypermeth 0.281167 insignificant 0.89988 0.46884 0.429159 7 0.84988 0.40895 0.440928 9.7652e-17 1.0000e+00 hypermethylated 9.7652e-15 1.0000e+00 hypermethylated 1.1380e-10 1.0000e+00 hypermethylated 1.1380e-07 1.00000000 hypermethylated 4.1425e-01 5.5468e-03 weaklyHypermeth 0.12058339 insignificant 0.90053 0.70723 0.1917563 7 0.89986 0.71837 0.1814897 2.3240e-13 1.0000e+00 weaklyHypermeth 1.1620e-10 1.0000000 weaklyHypermeth 1.0337e-05 0.999996 weaklyHypermeth 2.0675e-03 1 weaklyHypermeth 0.1134846 0.01778379 weaklyHypermeth 0.790603 insignificant 0.46952 0.70723 -0.2467244 7 0.46737 0.71837 -0.2509992 9.9973e-01 3.6545e-04 hypomethylated 1.0000e+00 9.3706e-03 hypomethylated 9.9334e-01 3.6163e-04 hypomethylated 1.0000e+00 1.9897e-02 hypomethylated -0.30076199 2.2652e-02 weaklyHypometh 0.4441491 insignificant chr10 130409837 130410837 104843 MKI67 ENSG00000148773 0.86392 230 5 0.90706 155 5 0.76740 166 5 0.91154 121 4 0.83949 95 5 0.92096 241 5 0.85613 110 5 0.88451 139 5 0.82273 144 5 0.97727 102 5 0.93656 201 5 0.86880 99 5 0.91765 135 5 NA 0 0 0.82604 124 5 0.89723 59 4 0.77381 79 5 0.82059 120 5 0.90125 136 5 0.90470 199 5 0.94821 77 4 0.76260 82 4 0.86770 117 5 0.90770 86 5 0.91667 21 2 0.92309 170 5 0.85417 84 5 0.84301 88 5 0.88400 122 5 0.90836 185 5 0.91574 139 5 0.95483 217 5 0.51332 176 5 0.576028 129 5 1.00000 94 4 0.66333 28 2 0.74157 101 5 0.65649 163 5 0.66411 263 5 0.61838 203 5 0.84685 150 5 0.77931 186 5 0.66493 187 4 0.86702 0.90241 0.75592 0.91093 0.83590 0.91281 0.86387 0.87915 0.83939 0.97536 0.93406 0.90538 0.91786 NA 0.84591 0.88897 0.77476 0.81599 0.89961 0.91816 0.92050 0.76230 0.86510 0.89963 0.94563 0.92580 0.84854 0.87490 0.89625 0.89685 0.89714 0.95882 0.57247 0.578274 0.907632 0.63656 0.77756 0.64512 0.69996 0.65753 0.85235 0.84368 0.64039 4 0.88173 0.89409 -0.0143577 5 0.87928 0.89360 -0.0143171 0.82512656 0.246849 insignificant 1.00000 1 insignificant 0.95080 0.098081 insignificant 1 1 insignificant -0.0169449 0.40136 lowCoverage 1 lowCoverage 0.88173 0.68017 0.2087510 5 0.87928 0.65872 0.2205609 2.3183e-12 1.0000e+00 hypermethylated 7.2446e-11 1.0000e+00 hypermethylated 6.0944e-05 9.9986e-01 hypermethylated 1.6929e-03 1.0000e+00 hypermethylated 0.1817698 4.6853e-02 lowCoverage 0.60068388 lowCoverage 0.88173 0.65925 0.1789366 5 0.87928 0.69611 0.1831674 3.4297e-12 0.99990516 weaklyHypermeth 3.7893e-10 1.00000 weaklyHypermeth 9.1502e-05 0.9947516 weaklyHypermeth 5.0834e-03 1 weaklyHypermeth 0.15884459 0.01724875 lowCoverage 0.632660 lowCoverage 0.89409 0.68017 0.224720 5 0.89360 0.65872 0.234878 1.5363e-08 1.0000e+00 hypermethylated 4.0430e-07 1.0000e+00 hypermethylated 1.6133e-04 9.9991e-01 hypermethylated 4.1366e-03 1.00000000 hypermethylated 1.9871e-01 3.4563e-02 lowCoverage 0.45477495 lowCoverage 0.89409 0.65925 0.1918812 5 0.89360 0.69611 0.1974845 6.6835e-08 9.9988e-01 weaklyHypermeth 5.1411e-06 1.0000000 weaklyHypermeth 1.4406e-04 0.999038 weaklyHypermeth 1.1206e-02 1 weaklyHypermeth 0.1757895 0.01106413 lowCoverage 0.612522 lowCoverage 0.68017 0.65925 -0.0165365 5 0.65872 0.69611 -0.0373935 5.4638e-01 9.9527e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6564e-01 2.4819e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02292524 7.8531e-01 lowCoverage 1.0000000 lowCoverage chr10 130410050 130411050 104844 MKI67 ENSG00000148773 0.86392 230 5 0.90706 155 5 0.76740 166 5 0.91154 121 4 0.83949 95 5 0.92096 241 5 0.85613 110 5 0.88451 139 5 0.82273 144 5 0.97727 102 5 0.93656 201 5 0.86880 99 5 0.91765 135 5 NA 0 0 0.82604 124 5 0.89723 59 4 0.77381 79 5 0.82059 120 5 0.90125 136 5 0.90470 199 5 0.94821 77 4 0.76260 82 4 0.86770 117 5 0.90770 86 5 0.91667 21 2 0.92309 170 5 0.85417 84 5 0.84301 88 5 0.88400 122 5 0.90836 185 5 0.91574 139 5 0.95483 217 5 0.51332 176 5 0.576028 129 5 1.00000 94 4 0.66333 28 2 0.74157 101 5 0.65649 163 5 0.66411 263 5 0.61838 203 5 0.84685 150 5 0.77931 186 5 0.66493 187 4 0.86702 0.90241 0.75592 0.91093 0.83590 0.91281 0.86387 0.87915 0.83939 0.97536 0.93406 0.90538 0.91786 NA 0.84591 0.88897 0.77476 0.81599 0.89961 0.91816 0.92050 0.76230 0.86510 0.89963 0.94563 0.92580 0.84854 0.87490 0.89625 0.89685 0.89714 0.95882 0.57247 0.578274 0.907632 0.63656 0.77756 0.64512 0.69996 0.65753 0.85235 0.84368 0.64039 4 0.88173 0.89409 -0.0143577 5 0.87928 0.89360 -0.0143171 0.82512656 0.246849 insignificant 1.00000 1 insignificant 0.95080 0.098081 insignificant 1 1 insignificant -0.0169449 0.40136 lowCoverage 1 lowCoverage 0.88173 0.68017 0.2087510 5 0.87928 0.65872 0.2205609 2.3183e-12 1.0000e+00 hypermethylated 7.2446e-11 1.0000e+00 hypermethylated 6.0944e-05 9.9986e-01 hypermethylated 1.6929e-03 1.0000e+00 hypermethylated 0.1817698 4.6853e-02 lowCoverage 0.60068388 lowCoverage 0.88173 0.65925 0.1789366 5 0.87928 0.69611 0.1831674 3.4297e-12 0.99990516 weaklyHypermeth 3.7893e-10 1.00000 weaklyHypermeth 9.1502e-05 0.9947516 weaklyHypermeth 5.0834e-03 1 weaklyHypermeth 0.15884459 0.01724875 lowCoverage 0.632660 lowCoverage 0.89409 0.68017 0.224720 5 0.89360 0.65872 0.234878 1.5363e-08 1.0000e+00 hypermethylated 4.0430e-07 1.0000e+00 hypermethylated 1.6133e-04 9.9991e-01 hypermethylated 4.1366e-03 1.00000000 hypermethylated 1.9871e-01 3.4563e-02 lowCoverage 0.45477495 lowCoverage 0.89409 0.65925 0.1918812 5 0.89360 0.69611 0.1974845 6.6835e-08 9.9988e-01 weaklyHypermeth 5.1411e-06 1.0000000 weaklyHypermeth 1.4406e-04 0.999038 weaklyHypermeth 1.1206e-02 1 weaklyHypermeth 0.1757895 0.01106413 lowCoverage 0.612522 lowCoverage 0.68017 0.65925 -0.0165365 5 0.65872 0.69611 -0.0373935 5.4638e-01 9.9527e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6564e-01 2.4819e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02292524 7.8531e-01 lowCoverage 1.0000000 lowCoverage chr10 130557348 130558348 104871 MKI67 ENSG00000148773 0.88685 407 6 0.88971 455 6 0.81388 194 6 0.86871 405 7 0.93919 135 6 0.67367 408 5 0.86503 175 6 0.92276 274 6 0.85748 191 6 0.95473 135 7 0.94017 224 7 0.90476 95 4 0.94154 184 6 0.88465 144 6 0.76208 208 6 0.77679 73 5 0.85417 21 2 0.85058 373 6 0.94075 318 6 0.79450 354 6 0.86243 50 4 0.73347 87 5 0.96072 196 7 0.79550 105 7 0.94218 68 6 0.95452 464 7 0.83123 144 5 0.77959 98 5 0.91805 269 6 0.96960 487 7 0.93853 417 7 0.92799 393 7 0.53274 301 6 0.421825 198 5 0.55498 257 7 0.79167 32 2 0.49906 304 7 0.58206 346 7 0.88439 363 6 0.88268 262 6 0.95020 402 6 0.87445 185 5 0.92969 365 6 0.91913 0.88200 0.81562 0.90581 0.96111 0.90787 0.92055 0.92692 0.88424 0.97514 0.94927 0.90224 0.95580 0.85781 0.89428 0.69204 0.93222 0.90635 0.92879 0.92647 0.85891 0.69437 0.94746 0.93323 0.93939 0.96984 0.78538 0.86911 0.91720 0.96077 0.94030 0.91308 0.41602 0.322400 0.881758 0.80449 0.53709 0.66244 0.88648 0.87413 0.92731 0.88643 0.94725 4 0.91305 0.92496 -0.0098700 7 0.84816 0.80508 0.0430807 0.93226546 0.142290 insignificant 1.00000 1 insignificant 0.93887 0.268461 insignificant 1 1 insignificant -0.0183852 0.52546 insignificant 1 insignificant 0.91323 0.60960 0.3080314 7 0.89790 0.57414 0.3237540 1.3137e-24 1.0000e+00 hypermethylated 1.3137e-22 1.0000e+00 hypermethylated 5.7104e-08 1.0000e+00 hypermethylated 6.3449e-06 1.0000e+00 hypermethylated 0.3023777 1.2655e-03 weaklyHypermeth 0.04323832 weaklyHypermeth 0.91323 0.91883 0.0031703 6 0.89790 0.90468 -0.0067802 7.0973e-01 0.63732266 insignificant 1.0000e+00 1.00000 insignificant 2.2013e-01 0.7140023 insignificant 1.0000e+00 1 insignificant -0.03818518 0.10520271 insignificant 1.000000 insignificant 0.92530 0.60960 0.305879 7 0.92009 0.57414 0.345947 2.0505e-16 1.0000e+00 hypermethylated 1.8641e-14 1.0000e+00 hypermethylated 1.2255e-07 1.0000e+00 hypermethylated 1.3616e-05 1.00000000 hypermethylated 3.2076e-01 6.4787e-04 hypermethylated 0.02399513 hypermethylated 0.92530 0.91883 0.0127697 6 0.92009 0.90468 0.0154132 1.5947e-01 9.1770e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.0114e-01 0.979571 insignificant 1.0000e+00 1 insignificant -0.0198000 0.48729240 insignificant 1.000000 insignificant 0.60960 0.91883 -0.2734894 6 0.57414 0.90468 -0.3305343 1.0000e+00 2.5632e-08 hypomethylated 1.0000e+00 2.1360e-06 hypomethylated 9.9996e-01 5.8860e-05 hypomethylated 1.0000e+00 5.3509e-03 hypomethylated -0.34056292 7.4357e-04 hypomethylated 0.0413094 hypomethylated chr10 130732096 130733096 104911 MKI67 ENSG00000148773 0.87424 245 5 0.79526 98 5 0.55476 33 3 0.91517 234 5 0.72000 17 1 0.86043 108 5 0.82205 39 5 0.81799 84 5 0.65530 19 1 0.83831 38 4 0.87567 115 5 0.47500 19 1 0.72694 51 5 NA 0 0 0.73810 40 5 0.50000 2 0 0.36190 26 4 0.85801 293 5 0.94667 78 5 0.81886 63 4 0.80147 48 5 0.68241 96 5 0.76973 118 5 0.60833 39 4 0.92794 44 5 0.90502 179 5 0.56197 43 4 0.84286 38 4 0.84393 132 5 0.87918 164 5 0.89394 176 5 0.86813 136 5 0.69526 87 5 0.535227 67 5 0.40435 218 5 0.60714 33 2 0.68000 28 2 0.73333 43 3 0.62629 194 5 0.80723 190 5 0.77781 190 5 0.87080 179 5 0.93843 183 5 0.86118 0.79453 0.59158 0.92618 0.69359 0.82514 0.81903 0.83423 0.62394 0.80470 0.88619 0.41346 0.72822 NA 0.79426 NA 0.37973 0.86192 0.93248 0.80495 0.80018 0.67880 0.78326 0.77938 0.91968 0.90462 0.60511 0.82570 0.85163 0.88329 0.88395 0.86677 0.69180 0.631944 0.212375 0.65476 0.70385 0.69658 0.62921 0.80548 0.79034 0.87827 0.94262 1 0.83146 0.84831 -0.0057999 5 0.83712 0.84061 -0.0034896 0.77331042 0.546329 insignificant 1.00000 1 insignificant 0.97177 0.128342 insignificant 1 1 insignificant -0.0537588 0.30208 lowCoverage 1 lowCoverage 0.83146 0.52521 0.3097853 5 0.83712 0.55130 0.2858146 6.8865e-10 9.9901e-01 hypermethylated 1.6015e-08 1.0000e+00 hypermethylated 3.9646e-02 9.6169e-01 weaklyHypermeth 3.8121e-01 1.0000e+00 insignificant 0.1357639 5.2447e-02 lowCoverage 0.64749333 lowCoverage 0.83146 0.82799 0.0311981 5 0.83712 0.80579 0.0313291 1.7156e-01 0.77886778 insignificant 1.0000e+00 1.00000 insignificant 6.2505e-01 0.2230697 insignificant 1.0000e+00 1 insignificant -0.05912960 0.38357740 lowCoverage 1.000000 lowCoverage 0.84831 0.52521 0.316230 5 0.84061 0.55130 0.289304 4.1315e-09 9.9530e-01 hypermethylated 1.2520e-07 1.0000e+00 hypermethylated 8.1990e-03 9.9819e-01 weaklyHypermeth 1.0788e-01 1.00000000 insignificant 1.8952e-01 1.1170e-02 lowCoverage 0.20345791 lowCoverage 0.84831 0.82799 0.0299854 5 0.84061 0.80579 0.0348187 1.0171e-01 8.5488e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.7621e-01 0.893772 insignificant 1.0000e+00 1 insignificant -0.0053708 0.93402744 lowCoverage 1.000000 lowCoverage 0.52521 0.82799 -0.2812870 5 0.55130 0.80579 -0.2544855 9.7534e-01 1.6445e-03 weaklyHypometh 1.0000e+00 3.2891e-02 weaklyHypometh 9.8850e-01 4.6373e-02 weaklyHypometh 1.0000e+00 6.2666e-01 insignificant -0.19489347 2.5321e-02 lowCoverage 0.4674523 lowCoverage chr10 131035724 131036724 104978 MKI67 ENSG00000148773 0.77029 185 8 0.81220 146 8 0.82515 161 8 0.82765 178 5 0.84721 102 6 0.77869 203 6 0.83839 131 6 0.82323 100 6 0.76249 101 6 0.86404 97 6 0.82457 167 6 0.82708 73 4 0.91988 127 6 0.95833 23 2 0.87925 155 6 0.83850 122 6 0.81710 75 6 0.76827 195 7 0.86049 102 6 0.76940 179 7 0.80707 70 6 0.76099 94 4 0.81434 192 8 0.82429 82 6 0.70040 42 4 0.86437 173 8 0.73079 103 6 0.76347 50 5 0.83960 86 6 0.84564 175 8 0.87760 126 8 0.85784 218 8 0.65397 188 8 0.317278 141 6 0.56523 160 7 0.29600 33 3 0.59070 80 6 0.60222 144 8 0.79258 224 7 0.84755 190 7 0.76442 161 5 0.79984 187 6 0.63593 230 6 0.77647 0.80472 0.77323 0.83235 0.84064 0.81409 0.81573 0.81868 0.74113 0.85131 0.83358 0.78089 0.91750 0.84513 0.85948 0.78352 0.81923 0.77821 0.84743 0.82213 0.81919 0.80710 0.84545 0.80171 0.80019 0.87251 0.76165 0.72831 0.84571 0.84785 0.86543 0.84408 0.65508 0.378127 0.512962 0.40270 0.64366 0.57543 0.80869 0.81681 0.82433 0.80673 0.82327 4 0.82265 0.84125 -0.0105672 6 0.82539 0.83288 -0.0074927 0.83477533 0.108779 insignificant 1.00000 1 insignificant 0.48925 0.346375 insignificant 1 1 insignificant 0.0234114 0.25006 insignificant 1 insignificant 0.82265 0.57641 0.2638212 6 0.82539 0.57656 0.2488279 2.6738e-18 1.0000e+00 hypermethylated 1.6711e-16 1.0000e+00 hypermethylated 5.0559e-10 1.0000e+00 hypermethylated 1.0112e-07 1.0000e+00 hypermethylated 0.3263785 3.3076e-03 weaklyHypermeth 0.08269111 weaklyHypermeth 0.82265 0.80040 0.0028667 6 0.82539 0.78573 0.0396578 2.7124e-01 0.08721422 insignificant 1.0000e+00 1.00000 insignificant 2.2388e-01 0.1213683 insignificant 1.0000e+00 1 insignificant 0.06254893 0.15716725 insignificant 1.000000 insignificant 0.84125 0.57641 0.271865 6 0.83288 0.57656 0.256321 5.8366e-15 1.0000e+00 hypermethylated 4.1467e-13 1.0000e+00 hypermethylated 5.2795e-10 1.0000e+00 hypermethylated 1.5319e-07 1.00000000 hypermethylated 3.0297e-01 4.2242e-03 weaklyHypermeth 0.09468761 weaklyHypermeth 0.84125 0.80040 0.0137499 6 0.83288 0.78573 0.0471504 1.0003e-01 5.3765e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.4248e-01 0.587943 insignificant 1.0000e+00 1 insignificant 0.0391375 0.35796909 insignificant 1.000000 insignificant 0.57641 0.80040 -0.2563909 6 0.57656 0.78573 -0.2091701 9.6882e-01 4.6061e-07 hypomethylated 1.0000e+00 2.5589e-05 hypomethylated 8.2815e-01 1.5178e-05 hypomethylated 1.0000e+00 2.2357e-03 hypomethylated -0.26382959 7.2965e-03 weaklyHypometh 0.1972016 insignificant chr10 131536662 131537662 105053 MGMT ENSG00000170430 0.91807 310 5 0.85220 182 5 0.57808 84 5 0.96925 260 5 0.92087 56 3 0.93114 387 5 0.90556 75 5 0.95007 149 5 0.93303 99 5 0.93319 89 5 0.84150 156 5 0.89474 20 1 0.812424 170 5 0.96471 88 5 0.93372 88 5 0.73333 18 1 0.25000 5 0 0.84327 326 5 0.826299 133 5 0.95137 311 5 0.77778 55 5 0.87500 72 4 0.96292 156 5 0.91168 77 5 0.77488 54 4 0.96354 176 5 0.90975 104 5 0.90278 31 1 0.83423 118 5 0.97563 212 5 0.949397 204 5 0.94600 289 5 0.909178 154 5 0.603809 110 5 0.928571 145 4 0.750000 8 0 0.69105 110 5 0.925090 182 5 0.92332 231 5 0.95987 266 5 0.97742 237 5 0.93717 210 5 0.97438 205 5 0.91083 0.88041 0.63836 0.96507 0.91472 0.92096 0.90247 0.93851 0.91185 0.92534 0.93803 0.87068 0.972968 0.97168 0.93040 0.70370 0.66986 0.86719 0.941498 0.94273 0.93827 0.95602 0.95382 0.91010 0.94151 0.94640 0.89951 0.90432 0.89600 0.96582 0.940102 0.95019 0.889160 0.639531 0.907407 0.80028071 0.847134 0.910460 0.91350 0.96506 0.96968 0.93418 0.97314 1 0.91148 0.93540 -0.0253000 5 0.85264 0.88462 -0.03198831 0.988642 0.0163155 weaklyHypometh 1 1.00000 insignificant 0.91342 0.0456218 weaklyHypometh 1 1.00000 insignificant -0.05149207 0.238758 lowCoverage 1 lowCoverage 0.91148 0.877292 0.035654 5 0.85264 0.825706 0.0269304 1.1784e-01 4.8553e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1135e-01 5.6798e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0458570 5.1677e-01 lowCoverage 1.0000e+00 lowCoverage 0.91148 0.95213 -0.0388040 5 0.85264 0.96448 -0.11184680 9.9913e-01 0.0291972 weaklyHypometh 1.0000e+00 1 insignificant 9.7162e-01 0.08165670 insignificant 1.0000e+00 1.00000 insignificant -0.1072915 0.0120453 lowCoverage 0.63396 lowCoverage 0.93540 0.877292 0.064629 5 0.88462 0.825706 0.05891873 2.8564e-02 9.9665e-01 weaklyHypermeth 2.9147e-01 1.0000e+00 insignificant 3.9225e-02 9.9673e-01 weaklyHypermeth 4.8297e-01 1.000e+00 insignificant 0.0973491 1.5544e-01 lowCoverage 1.0000e+00 lowCoverage 0.93540 0.95213 -0.0138612 5 0.88462 0.96448 -0.0798585 9.6914e-01 0.36680415 insignificant 1.0000e+00 1.00000 insignificant 9.0635e-01 0.600234 insignificant 1.0000e+00 1 insignificant -0.05579940 0.0274594 lowCoverage 1.00000 lowCoverage 0.877292 0.95213 -0.0743191 5 0.825706 0.96448 -0.1387772 9.9952e-01 8.0828e-02 insignificant 1.0000e+00 8.8997e-01 insignificant 9.9969e-01 3.0949e-02 weaklyHypometh 1.0000e+00 5.1721e-01 insignificant -0.153148 4.2613e-02 lowCoverage 0.72224829 lowCoverage chr10 131557976 131558976 105060 MGMT ENSG00000170430 0.81747 138 5 0.60053 96 5 0.95278 20 2 0.84363 117 5 0.81481 26 2 0.87902 183 5 0.60816 31 3 0.87576 62 5 0.60147 36 2 0.92778 35 2 0.85863 167 5 0.63333 11 0 0.601496 43 2 1.00000 1 0 0.87976 41 5 0.50000 5 0 1.00000 7 1 0.76039 119 5 0.936970 70 4 0.93285 147 5 0.55455 30 2 0.85974 62 5 0.79487 47 5 0.87321 51 5 0.90005 165 5 0.88267 115 5 0.58333 40 2 0.92245 17 2 0.67992 80 5 0.89014 94 5 0.894286 121 5 0.81760 142 5 0.841485 101 5 0.837500 76 5 0.500000 74 2 0.755792 100 5 0.92941 40 5 0.845881 127 5 0.47500 88 5 0.86611 101 5 0.78947 85 5 0.84832 69 5 0.86686 103 5 0.85102 0.86547 0.90858 0.82328 0.95522 0.84025 0.54371 0.81434 0.64168 0.93657 0.83805 0.75373 0.795159 NA 0.84568 0.55818 0.96117 0.83885 0.916780 0.89019 0.75916 0.72553 0.90930 0.74640 0.91893 0.88941 0.72512 0.78550 0.71697 0.88615 0.848614 0.87189 0.776766 0.672575 0.581166 0.69418187 0.857770 0.758899 0.33675 0.81812 0.78833 0.78286 0.83040 1 0.84689 0.85996 -0.0131510 5 0.64036 0.71127 -0.07091082 0.867023 0.7262266 insignificant 1 1.00000 insignificant 0.86627 0.4596462 insignificant 1 1.00000 insignificant -0.00316112 0.950619 lowCoverage 1 lowCoverage 0.85097 0.776062 0.078257 5 0.85790 0.815965 0.0419397 1.8731e-03 2.9221e-02 weaklyHypermeth 2.5312e-02 1.0000e+00 weaklyHypermeth 1.6912e-01 3.8766e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0162302 8.2304e-01 lowCoverage 1.0000e+00 lowCoverage 0.85097 0.73094 0.0997536 5 0.85790 0.77366 0.08424812 4.8084e-03 0.9242880 weaklyHypermeth 1.4142e-01 1 insignificant 4.3958e-02 0.84770258 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0320905 0.7110683 lowCoverage 1.00000 lowCoverage 0.86221 0.776062 0.098015 5 0.87136 0.815965 0.05539698 4.1119e-03 7.4888e-02 weaklyHypermeth 5.4825e-02 1.0000e+00 weaklyHypermeth 1.5964e-01 7.8330e-02 insignificant 1.0000e+00 1.000e+00 insignificant 0.0193913 7.9253e-01 lowCoverage 1.0000e+00 lowCoverage 0.86221 0.73094 0.1086848 5 0.87136 0.77366 0.0977054 1.4838e-02 0.99275949 weaklyHypermeth 4.1217e-01 1.00000 insignificant 7.5660e-02 0.962405 insignificant 1.0000e+00 1 insignificant 0.03525162 0.6873992 lowCoverage 1.00000 lowCoverage 0.776062 0.73094 0.0225492 5 0.815965 0.77366 0.0423084 7.1211e-02 3.6311e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8589e-02 5.4386e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.015860 8.7375e-01 lowCoverage 1.00000000 lowCoverage chr10 131577924 131578924 105071 MGMT ENSG00000170430 0.91079 166 6 0.84268 127 6 0.88110 79 6 0.89685 88 6 0.97619 23 3 0.93610 152 6 0.77702 48 4 0.84768 105 6 0.76835 60 6 0.84152 48 4 0.94384 188 6 0.90556 21 2 0.884050 121 6 NA 0 0 0.92635 57 4 0.87500 5 0 0.67094 34 2 0.87091 104 6 0.928435 66 4 0.85504 173 6 0.92460 52 4 0.87810 59 6 0.89241 105 6 0.94274 46 5 0.92857 31 3 0.88858 113 6 0.85819 94 6 0.84028 21 1 0.80301 102 6 0.91566 100 6 0.814881 120 6 0.91422 235 6 0.846556 99 6 0.745298 114 6 0.692308 153 5 0.415527 43 3 0.97917 70 6 0.677309 135 6 0.78849 99 6 0.80685 185 6 0.85103 83 6 0.72574 110 6 0.81520 93 4 0.89555 0.83692 0.86387 0.89445 0.95726 0.92370 0.75363 0.83903 0.77163 0.80097 0.92723 0.88177 0.861768 NA 0.92008 0.86472 0.66793 0.86522 0.911927 0.86159 0.90619 0.85000 0.89167 0.92998 0.92430 0.87025 0.83301 0.82158 0.80910 0.89631 0.799838 0.89569 0.859420 0.752494 0.763138 0.49693184 0.983974 0.630653 0.75236 0.80222 0.85871 0.72355 0.80469 1 0.87147 0.86364 0.0066292 6 0.88405 0.87867 0.00537990 0.248583 0.4151959 insignificant 1 1.00000 insignificant 0.40579 0.3369226 insignificant 1 1.00000 insignificant -0.01299421 0.542790 lowCoverage 1 lowCoverage 0.87147 0.763844 0.108277 6 0.88405 0.755346 0.1287018 9.1622e-05 9.9998e-01 weaklyHypermeth 1.6074e-03 1.0000e+00 weaklyHypermeth 1.4828e-02 9.9207e-01 weaklyHypermeth 2.3169e-01 1.0000e+00 insignificant 0.1444154 1.2198e-01 lowCoverage 1.0000e+00 lowCoverage 0.87147 0.79474 0.0787092 6 0.88405 0.80283 0.08121332 4.2369e-04 0.9999902 weaklyHypermeth 1.7367e-02 1 weaklyHypermeth 6.1189e-04 0.99989290 weaklyHypermeth 4.0793e-02 1.00000 weaklyHypermeth 0.0729819 0.0201744 lowCoverage 0.89195 lowCoverage 0.86364 0.763844 0.096879 6 0.87867 0.755346 0.12332188 3.6612e-04 9.9905e-01 weaklyHypermeth 5.7207e-03 1.0000e+00 weaklyHypermeth 1.0267e-02 9.5379e-01 weaklyHypermeth 1.6831e-01 1.000e+00 insignificant 0.1574096 9.7580e-02 insignificant 1.0000e+00 insignificant 0.86364 0.79474 0.0718121 6 0.87867 0.80283 0.0758334 9.6615e-05 0.99993913 weaklyHypermeth 6.0385e-03 1.00000 weaklyHypermeth 1.4837e-03 0.999924 weaklyHypermeth 9.3041e-02 1 weaklyHypermeth 0.08597608 0.0087998 weaklyHypermeth 0.73332 insignificant 0.763844 0.79474 -0.0202570 6 0.755346 0.80283 -0.0474885 9.0942e-01 3.3857e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2438e-01 7.9816e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.071434 4.0760e-01 insignificant 1.00000000 insignificant chr10 131578531 131579531 105072 MGMT ENSG00000170430 0.89808 127 5 0.83344 109 5 0.88232 63 5 0.89051 60 5 0.97143 21 3 0.92938 119 5 0.75909 33 3 0.85054 93 5 0.75952 44 5 0.84619 37 3 0.95166 167 5 0.96667 16 1 0.860860 99 5 NA 0 0 0.93162 47 3 1.00000 1 0 0.65513 30 2 0.90825 85 5 0.914122 55 3 0.86289 135 5 0.90952 44 3 0.88229 52 5 0.87959 82 5 0.95128 36 4 0.94286 24 2 0.86630 100 5 0.85205 85 5 0.80833 19 1 0.78266 81 5 0.92956 87 5 0.788969 102 5 0.90557 188 5 0.849200 87 5 0.761025 105 5 0.692308 153 5 0.375556 30 2 0.97500 60 5 0.706104 120 5 0.78148 65 5 0.82378 149 5 0.82923 58 5 0.70773 72 5 0.79158 63 3 0.87930 0.82621 0.86158 0.88741 0.94845 0.91422 0.73032 0.84021 0.76321 0.79742 0.93186 0.93986 0.833267 NA 0.92422 NA 0.65100 0.90254 0.893767 0.87103 0.88684 0.84853 0.87829 0.93616 0.93814 0.84349 0.82148 0.78479 0.78938 0.90666 0.770022 0.88295 0.864799 0.770190 0.770024 0.47250859 0.980670 0.650719 0.73769 0.81871 0.83783 0.70453 0.77816 1 0.86801 0.85000 0.0184452 5 0.88370 0.86789 0.01581225 0.141729 0.7418564 insignificant 1 1.00000 insignificant 0.25935 0.6507402 insignificant 1 1.00000 insignificant 0.00254207 0.921232 lowCoverage 1 lowCoverage 0.86801 0.769369 0.098648 5 0.88370 0.764043 0.1196545 1.7555e-03 9.9975e-01 weaklyHypermeth 2.4048e-02 1.0000e+00 weaklyHypermeth 3.0491e-02 9.7479e-01 weaklyHypermeth 4.2348e-01 1.0000e+00 insignificant 0.1509261 1.2800e-01 lowCoverage 1.0000e+00 lowCoverage 0.86801 0.77641 0.0869442 5 0.88370 0.79530 0.08839364 4.3417e-04 0.9999895 weaklyHypermeth 1.7367e-02 1 weaklyHypermeth 3.5642e-04 0.99998529 weaklyHypermeth 2.5458e-02 1.00000 weaklyHypermeth 0.0906999 0.0095603 lowCoverage 0.58174 lowCoverage 0.85000 0.769369 0.080643 5 0.86789 0.764043 0.10384229 2.2269e-02 9.9468e-01 weaklyHypermeth 2.3690e-01 1.0000e+00 insignificant 4.7212e-02 8.8526e-01 weaklyHypermeth 5.4897e-01 1.000e+00 insignificant 0.1483840 1.3262e-01 lowCoverage 1.0000e+00 lowCoverage 0.85000 0.77641 0.0675987 5 0.86789 0.79530 0.0725814 1.0301e-03 0.99945976 weaklyHypermeth 4.0972e-02 1.00000 weaklyHypermeth 3.4031e-03 0.999522 weaklyHypermeth 2.0018e-01 1 insignificant 0.08815788 0.0106237 lowCoverage 0.81720 lowCoverage 0.769369 0.77641 -0.0071657 5 0.764043 0.79530 -0.0312609 8.2242e-01 5.4493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7920e-01 9.0949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.060226 5.0677e-01 lowCoverage 1.00000000 lowCoverage chr10 131584733 131585733 105075 MGMT ENSG00000170430 0.38686 265 14 0.26366 350 10 0.60724 331 12 0.56857 344 10 0.26280 353 10 0.69396 274 11 0.43993 417 15 0.20041 432 15 0.27386 489 15 0.38153 400 14 0.66669 344 15 0.48479 294 12 0.063067 676 15 0.57237 175 10 0.26493 547 15 0.56336 166 12 0.11518 567 12 0.50400 342 10 0.036469 361 15 0.15284 277 14 0.55159 69 8 0.32812 202 10 0.40098 251 12 0.37048 187 12 0.67198 131 10 0.50505 517 12 0.28581 220 14 0.23767 166 10 0.21490 484 15 0.25891 516 15 0.056537 582 15 0.72460 277 11 0.841154 358 12 0.683427 315 15 0.916426 737 13 0.735931 43 5 0.73993 155 12 0.763083 343 11 0.16511 419 15 0.34862 347 15 0.21894 300 12 0.41287 274 12 0.22870 424 10 0.39256 0.28900 0.55515 0.46963 0.26259 0.71939 0.39054 0.20460 0.27874 0.40720 0.64792 0.59029 0.040475 0.48676 0.27034 0.69608 0.08434 0.56625 0.066337 0.16895 0.64514 0.30539 0.49592 0.36500 0.68534 0.44031 0.37111 0.35008 0.22930 0.22431 0.034395 0.80123 0.796746 0.553227 0.945045 0.65683207 0.738906 0.706362 0.19892 0.39132 0.26136 0.47359 0.25400 5 0.30582 0.31594 -0.0025808 15 0.34170 0.34198 -0.00027924 0.742388 0.8108971 insignificant 1 1.00000 insignificant 0.72758 0.7380029 insignificant 1 1.00000 insignificant -0.00875973 0.905460 insignificant 1 insignificant 0.30582 0.823680 -0.511897 15 0.34170 0.812156 -0.4704559 1.0000e+00 2.3484e-45 hypomethylated 1.0000e+00 2.3484e-42 hypomethylated 1.0000e+00 6.0234e-22 hypomethylated 1.0000e+00 6.0234e-19 hypomethylated -0.4048666 5.5076e-07 hypomethylated 5.0069e-05 hypomethylated 0.30582 0.31689 0.0534598 12 0.34170 0.25782 0.08387850 8.3336e-03 0.9952899 weaklyHypermeth 2.3149e-01 1 insignificant 1.7701e-03 0.99993429 weaklyHypermeth 1.0413e-01 1.00000 insignificant 0.1002784 0.1442979 insignificant 1.00000 insignificant 0.31594 0.823680 -0.515216 15 0.34198 0.812156 -0.47017663 1.0000e+00 1.9601e-36 hypomethylated 1.0000e+00 1.9601e-33 hypomethylated 1.0000e+00 6.1250e-18 hypomethylated 1.0000e+00 6.125e-15 hypomethylated -0.3961069 2.0977e-05 hypomethylated 1.7627e-03 hypomethylated 0.31594 0.31689 0.0645960 12 0.34198 0.25782 0.0841577 2.1797e-02 0.99507771 weaklyHypermeth 5.7361e-01 1.00000 insignificant 9.1507e-03 0.999767 weaklyHypermeth 4.0437e-01 1 insignificant 0.10903817 0.1576893 insignificant 1.00000 insignificant 0.823680 0.31689 0.5188439 12 0.812156 0.25782 0.5543344 1.0956e-37 1.0000e+00 hypermethylated 1.0956e-34 1.0000e+00 hypermethylated 3.5491e-17 1.0000e+00 hypermethylated 3.5491e-14 1.0000e+00 hypermethylated 0.505145 2.4786e-05 hypermethylated 0.00495715 hypermethylated chr10 131587718 131588718 105076 MGMT ENSG00000170430 0.83031 619 8 0.74346 417 8 0.82652 161 8 0.85364 336 8 0.90208 63 6 0.90547 397 8 0.87397 117 7 0.84398 268 8 0.79514 224 8 0.82302 146 8 0.82011 303 8 0.81845 65 7 0.727372 257 7 0.80000 5 1 0.77011 123 7 0.80952 15 0 0.76088 64 5 0.84552 399 8 0.570501 218 8 0.86839 311 8 0.82018 92 8 0.60299 162 7 0.88723 305 7 0.78584 96 8 0.77951 83 7 0.88851 419 8 0.78068 150 7 0.93544 82 6 0.79308 209 6 0.92774 413 8 0.853344 351 8 0.89587 428 8 0.727844 361 8 0.532481 203 8 0.928571 116 7 0.681134 101 7 0.70378 140 8 0.802559 440 8 0.87179 408 8 0.89097 459 8 0.85472 337 8 0.87325 463 7 0.82231 340 8 0.90178 0.86259 0.84502 0.86349 0.87985 0.92680 0.92709 0.85985 0.82738 0.82950 0.79820 0.81452 0.791203 NA 0.82087 0.71960 0.76357 0.87134 0.519408 0.86110 0.87560 0.55576 0.89415 0.82638 0.93840 0.90520 0.88654 0.92678 0.80585 0.93607 0.841457 0.92284 0.822772 0.450859 0.897641 0.57180657 0.881416 0.827564 0.87045 0.89098 0.82864 0.86179 0.87534 5 0.84107 0.86774 -0.0266643 8 0.79867 0.76622 0.03245361 0.873548 0.1622531 insignificant 1 1.00000 insignificant 0.89532 0.0192586 weaklyHypometh 1 1.00000 insignificant -0.01977796 0.532843 insignificant 1 insignificant 0.84091 0.771492 0.072294 8 0.76880 0.626472 0.1423311 7.2588e-03 9.8330e-01 weaklyHypermeth 8.4405e-02 1.0000e+00 weaklyHypermeth 2.2337e-01 8.8945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0800268 2.0496e-01 insignificant 1.0000e+00 insignificant 0.84137 0.86348 -0.0203739 8 0.83600 0.85834 -0.02234146 9.7185e-01 0.2132163 insignificant 1.0000e+00 1 insignificant 9.9173e-01 0.15169829 insignificant 1.0000e+00 1.00000 insignificant -0.0531868 0.0159238 weaklyHypometh 0.76058 insignificant 0.86774 0.772059 0.099422 8 0.76622 0.696080 0.07013646 7.6219e-03 9.9813e-01 weaklyHypermeth 8.9669e-02 1.0000e+00 weaklyHypermeth 8.6904e-02 9.8992e-01 insignificant 9.2451e-01 1.000e+00 insignificant 0.0998048 1.3687e-01 insignificant 1.0000e+00 insignificant 0.86930 0.86348 0.0059501 8 0.86199 0.85834 0.0036482 7.1352e-01 0.64318921 insignificant 1.0000e+00 1.00000 insignificant 4.0366e-01 0.562920 insignificant 1.0000e+00 1 insignificant -0.03340882 0.2660713 insignificant 1.00000 insignificant 0.774908 0.86348 -0.0885289 8 0.783090 0.85834 -0.0752553 9.3716e-01 2.5729e-02 weaklyHypometh 1.0000e+00 3.4768e-01 insignificant 9.6689e-01 2.0144e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.133214 5.5834e-02 insignificant 0.85606698 insignificant chr10 131892174 131893174 105097 GLRX3 ENSG00000108010 0.90585 268 5 0.77747 371 5 0.83768 154 5 0.90165 268 5 0.87564 103 5 0.72203 348 5 0.87427 191 5 0.88593 220 5 0.82310 188 5 0.94115 111 5 0.74184 303 5 0.87720 94 5 0.919535 188 5 0.91071 114 5 0.88031 197 5 0.97143 82 5 0.50000 2 0 0.88312 249 5 0.780383 528 5 0.89880 252 5 0.82667 123 5 0.77096 100 5 0.86274 194 5 0.85195 104 5 0.71325 64 5 0.89939 341 5 0.60931 167 5 0.58333 102 5 0.90277 413 5 0.66925 415 5 0.933755 387 5 0.90461 251 5 0.592200 233 5 0.674192 93 5 0.570550 336 5 1.000000 3 0 0.76008 263 5 0.803734 305 5 0.94132 329 5 0.93166 216 5 0.91189 200 5 0.89494 213 5 0.91990 207 5 0.90753 0.77437 0.84913 0.90972 0.87327 0.87215 0.88928 0.88879 0.82462 0.94257 0.89489 0.88049 0.930503 0.89556 0.85553 0.97945 NA 0.89001 0.938642 0.90654 0.99376 0.74395 0.87207 0.87605 0.85308 0.90684 0.75052 0.70624 0.91409 0.94257 0.929366 0.90409 0.609982 0.743769 0.568377 0.82270674 0.776035 0.825996 0.94845 0.92505 0.91622 0.90007 0.91990 5 0.88206 0.88275 -0.0037499 5 0.77307 0.70435 0.06872378 0.468244 0.6372668 insignificant 1 1.00000 insignificant 0.40150 0.8887708 insignificant 1 1.00000 insignificant 0.05140768 0.238503 lowCoverage 1 lowCoverage 0.88242 0.720195 0.168329 5 0.81859 0.750356 0.0682293 1.2238e-10 8.5421e-01 weaklyHypermeth 3.5995e-09 1.0000e+00 weaklyHypermeth 8.6405e-04 8.5096e-01 weaklyHypermeth 1.9201e-02 1.0000e+00 weaklyHypermeth 0.1119460 1.5337e-01 lowCoverage 1.0000e+00 lowCoverage 0.88242 0.91502 -0.0379792 5 0.81859 0.93298 -0.11439021 9.9846e-01 0.0115927 weaklyHypometh 1.0000e+00 1 insignificant 9.9947e-01 0.01690240 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0745371 0.0061525 lowCoverage 0.41017 lowCoverage 0.88304 0.720195 0.171106 5 0.73841 0.750356 -0.01194844 5.7785e-06 9.9331e-01 weaklyHypermeth 1.2841e-04 1.0000e+00 weaklyHypermeth 5.9743e-03 4.5257e-01 weaklyHypermeth 1.0668e-01 1.000e+00 insignificant 0.0605383 4.3666e-01 lowCoverage 1.0000e+00 lowCoverage 0.88304 0.91502 -0.0353170 5 0.73841 0.93298 -0.1945680 9.9569e-01 0.28530068 insignificant 1.0000e+00 1.00000 insignificant 9.9732e-01 0.052428 insignificant 1.0000e+00 1 insignificant -0.12594477 0.0045542 weaklyHypometh 0.45542 insignificant 0.720195 0.91502 -0.2117574 5 0.750356 0.93298 -0.1826195 9.9749e-01 4.1484e-04 hypomethylated 1.0000e+00 1.0818e-02 hypomethylated 9.9688e-01 5.7257e-03 weaklyHypometh 1.0000e+00 1.6418e-01 insignificant -0.186483 3.4706e-02 lowCoverage 0.62846995 lowCoverage chr10 133222268 133223268 105122 TCERG1L ENSG00000176769 0.95429 277 5 0.82892 331 5 0.75420 179 6 0.90278 247 5 0.95362 105 5 0.96890 387 6 0.96070 138 4 0.95701 254 6 0.81974 122 6 0.91837 89 5 0.93976 295 7 0.80658 51 3 0.889121 176 6 0.93004 109 5 0.93316 161 5 0.97619 40 3 0.97391 79 2 0.94651 385 5 0.963483 198 5 0.93824 313 6 0.80038 42 5 0.87031 104 5 0.83347 157 6 0.90888 102 6 0.98050 211 5 0.88980 326 6 0.83365 115 5 0.86842 93 5 0.87729 288 5 0.97629 324 5 0.970141 290 6 0.90313 270 6 0.751324 223 6 0.597463 155 5 0.965007 207 6 0.895455 82 3 0.69872 202 6 0.803418 244 5 0.97051 423 5 0.88340 309 5 0.96254 279 5 0.92172 286 5 0.96096 291 5 0.93020 0.89983 0.88937 0.91178 0.91681 0.95092 0.94726 0.92177 0.83532 0.90708 0.93909 0.74404 0.936067 0.93862 0.93340 0.94275 0.93469 0.93202 0.968735 0.92106 0.82767 0.86983 0.88734 0.93993 0.97147 0.93712 0.83420 0.92134 0.91021 0.95813 0.949151 0.89647 0.753763 0.602749 0.990952 0.86325618 0.700391 0.879631 0.94689 0.92670 0.92861 0.88666 0.93343 4 0.92530 0.91473 0.0105884 6 0.90840 0.91119 -0.00279582 0.062401 0.2789933 insignificant 1 1.00000 insignificant 0.47037 0.2783357 insignificant 1 1.00000 insignificant 0.02308623 0.306943 insignificant 1 insignificant 0.92530 0.817446 0.119331 5 0.90840 0.717950 0.1904479 7.5330e-11 9.9993e-01 weaklyHypermeth 2.2827e-09 1.0000e+00 weaklyHypermeth 1.0409e-02 9.9662e-01 weaklyHypermeth 1.7348e-01 1.0000e+00 insignificant 0.1305437 6.1468e-02 insignificant 8.9083e-01 insignificant 0.92545 0.93010 -0.0036209 5 0.91912 0.94798 -0.02885621 8.6852e-01 0.1348993 insignificant 1.0000e+00 1 insignificant 8.2295e-01 0.26135479 insignificant 1.0000e+00 1.00000 insignificant -0.0240510 0.2926912 insignificant 1.00000 insignificant 0.91473 0.817446 0.112077 5 0.91119 0.717950 0.19324372 3.8510e-05 9.9963e-01 weaklyHypermeth 7.2660e-04 1.0000e+00 weaklyHypermeth 2.3904e-02 9.9551e-01 weaklyHypermeth 3.1872e-01 1.000e+00 insignificant 0.1074575 1.0819e-01 insignificant 1.0000e+00 insignificant 0.91462 0.93010 -0.0103404 5 0.89851 0.94798 -0.0494705 6.0239e-01 0.16664868 insignificant 1.0000e+00 1.00000 insignificant 5.8325e-01 0.258606 insignificant 1.0000e+00 1 insignificant -0.04713726 0.0691041 insignificant 1.00000 insignificant 0.818018 0.93010 -0.1128502 5 0.749085 0.94798 -0.1988919 9.9879e-01 4.4280e-05 weaklyHypometh 1.0000e+00 1.5269e-03 weaklyHypometh 9.9381e-01 3.1032e-02 weaklyHypometh 1.0000e+00 5.1721e-01 insignificant -0.154595 3.5194e-02 weaklyHypometh 0.62846995 insignificant chr11 385088 386088 105134 PKP3 ENSG00000184363 0.88580 94 2 0.73969 93 6 0.84221 112 6 0.64191 121 3 0.85672 114 4 0.91667 80 5 0.82103 91 6 0.91110 84 6 0.89823 100 6 0.85425 109 6 0.91809 196 6 0.76136 115 6 0.784051 138 6 0.62963 38 2 0.92609 88 6 0.68373 70 4 0.83437 47 4 0.65897 158 4 0.794761 201 6 0.67444 69 5 0.87406 62 4 0.75000 16 2 0.76887 64 5 0.79994 50 6 0.93333 13 2 0.85265 127 6 0.81487 47 4 0.83267 36 4 0.80204 150 6 0.75962 106 6 0.700577 142 6 1.00000 79 4 0.546708 110 6 0.628732 200 6 0.397562 125 4 0.513889 15 0 0.65633 48 6 0.601429 100 6 0.91667 64 2 0.67096 88 2 0.97368 37 2 0.66453 166 2 0.92935 48 2 0.93823 0.92726 0.82645 0.90394 0.85671 0.97101 0.89607 0.97235 0.90532 0.95087 0.96138 0.84042 0.942390 0.90588 0.96805 0.93390 0.92085 0.88702 0.938249 0.85884 0.89997 0.76429 0.86661 0.97864 0.88482 0.94448 0.73933 0.87181 0.92983 0.89565 0.952575 1.00000 0.772986 0.845621 0.422190 0.81884058 0.677837 0.873913 0.95652 0.81349 0.88495 0.84392 0.82512 0 0.88905 0.89338 -0.0034078 6 0.78885 0.74019 0.04866197 0.598691 0.6103234 insignificant 1 1.00000 insignificant 0.75174 0.3092943 insignificant 1 1.00000 insignificant -0.02239733 0.500077 lowCoverage 1 lowCoverage 0.89184 0.591973 0.275676 6 0.85869 0.524574 0.3341173 7.3242e-20 9.9997e-01 hypermethylated 5.2316e-18 1.0000e+00 hypermethylated 2.1953e-07 9.9999e-01 hypermethylated 1.4636e-05 1.0000e+00 hypermethylated 0.2442135 4.3407e-04 lowCoverage 1.8873e-02 lowCoverage 0.88931 0.93052 0.0307298 2 0.79441 0.71861 0.07579318 6.0086e-09 0.8206139 lowCoverage 6.0086e-07 1 lowCoverage 9.4692e-02 0.55604955 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0293818 0.6963047 lowCoverage 1.00000 lowCoverage 0.89628 0.591973 0.252963 6 0.81022 0.524574 0.28564648 2.7310e-13 9.9966e-01 hypermethylated 1.3655e-11 1.0000e+00 hypermethylated 2.9603e-06 9.9969e-01 hypermethylated 1.6446e-04 1.000e+00 hypermethylated 0.2666108 2.3274e-04 lowCoverage 1.2930e-02 lowCoverage 0.89527 0.93052 0.0351374 2 0.79832 0.71861 0.0797033 1.2312e-05 0.79408255 lowCoverage 1.0260e-03 1.00000 lowCoverage 1.5720e-01 0.597824 lowCoverage 1.0000e+00 1 lowCoverage -0.00698444 0.9259009 lowCoverage 1.00000 lowCoverage 0.592965 0.93233 -0.0440249 2 0.612003 0.71338 -0.1013781 8.3946e-01 1.3275e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7673e-01 1.2672e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.273595 1.0912e-02 lowCoverage 0.30310042 lowCoverage chr11 1434316 1435316 105135 BRSK2 ENSG00000174672 0.95315 542 18 0.84678 323 15 0.85755 370 16 0.89153 445 21 0.76583 205 16 0.89364 487 18 0.80636 244 17 0.89374 468 16 0.78219 285 15 0.82270 543 16 0.84151 483 19 0.84453 182 15 0.857923 568 19 0.92999 316 11 0.93662 418 16 0.67501 165 15 0.80320 51 3 0.84743 486 19 0.932148 564 16 0.89712 492 18 0.82269 219 16 0.88837 256 19 0.85849 335 19 0.90235 239 16 0.88932 245 19 0.87511 511 16 0.81387 430 16 0.69433 149 10 0.92423 528 16 0.89667 676 16 0.842290 549 16 0.85224 595 19 0.801029 316 15 0.761570 507 19 0.388889 175 4 0.893079 163 16 0.72251 302 17 0.749586 548 15 0.93340 371 18 0.83170 575 19 0.84097 398 19 0.91642 506 19 0.95217 463 19 0.93615 0.83688 0.86516 0.87884 0.84636 0.91874 0.87259 0.90017 0.84457 0.82341 0.88191 0.83978 0.891810 0.90546 0.93004 0.77644 0.82974 0.82743 0.930045 0.92970 0.88883 0.90504 0.88779 0.92282 0.84532 0.85806 0.87184 0.82229 0.91087 0.91296 0.909438 0.91784 0.805137 0.807408 0.726766 0.90338475 0.763913 0.888403 0.95407 0.95652 0.92880 0.92109 0.93277 10 0.89452 0.89770 -0.0036272 19 0.85028 0.80704 0.04324732 0.757446 0.7521706 insignificant 1 1.00000 insignificant 0.96826 0.6285347 insignificant 1 1.00000 insignificant -0.00104847 0.964072 insignificant 1 insignificant 0.89477 0.832836 0.059956 16 0.85942 0.734076 0.1253424 2.2336e-08 9.7272e-01 weaklyHypermeth 5.3182e-07 1.0000e+00 weaklyHypermeth 5.2396e-03 9.8846e-01 weaklyHypermeth 9.8860e-02 1.0000e+00 weaklyHypermeth 0.1345044 1.1579e-01 insignificant 1.0000e+00 insignificant 0.89517 0.94189 -0.0474766 19 0.88634 0.88172 0.00461905 9.9995e-01 0.0053314 weaklyHypometh 1.0000e+00 1 insignificant 9.9883e-01 0.00040037 weaklyHypometh 1.0000e+00 0.40037 insignificant -0.0409828 0.1967000 insignificant 1.00000 insignificant 0.89869 0.832836 0.064243 16 0.86845 0.734076 0.13436870 1.6363e-06 9.8891e-01 weaklyHypermeth 3.8053e-05 1.0000e+00 weaklyHypermeth 1.6215e-03 9.8781e-01 weaklyHypermeth 3.4710e-02 1.000e+00 weaklyHypermeth 0.1355529 1.1419e-01 insignificant 1.0000e+00 insignificant 0.89790 0.94194 -0.0451671 19 0.79658 0.88627 -0.0896901 9.9968e-01 0.00897192 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9957e-01 0.011715 weaklyHypometh 1.0000e+00 1 insignificant -0.03993428 0.2211976 insignificant 1.00000 insignificant 0.834081 0.94272 -0.1091614 16 0.797909 0.86709 -0.0691809 9.9996e-01 2.0969e-07 weaklyHypometh 1.0000e+00 1.6130e-05 weaklyHypometh 9.9981e-01 6.0292e-05 weaklyHypometh 1.0000e+00 5.4811e-03 weaklyHypometh -0.175487 5.5637e-02 insignificant 0.85606698 insignificant chr11 1463805 1464805 105136 ENSG00000182208 0.83161 311 13 0.81403 196 10 0.65987 348 13 0.87271 264 17 0.51181 157 10 0.77038 358 17 0.66168 135 8 0.72286 319 11 0.69876 227 12 0.74943 226 13 0.71282 461 15 0.52359 107 6 0.626274 375 15 0.72140 152 7 0.81240 195 8 0.35556 25 0 0.51389 28 2 0.74720 419 16 0.694418 383 14 0.79363 264 16 0.68043 180 16 0.59383 130 10 0.72575 177 16 0.49662 189 11 0.78252 157 11 0.86024 491 14 0.68102 247 10 0.46048 163 7 0.78634 336 12 0.70173 440 13 0.813340 348 12 0.82180 334 17 0.553010 263 15 0.586428 268 15 0.579232 348 10 0.602453 66 5 0.54689 311 11 0.682336 359 12 0.58645 263 14 0.65170 342 15 0.78974 199 13 0.62152 235 13 0.70384 254 13 0.86492 0.80992 0.71040 0.82603 0.66976 0.86582 0.84425 0.88097 0.81771 0.86380 0.83758 0.73493 0.828318 0.75755 0.79205 0.46648 0.78535 0.72463 0.858868 0.78829 0.92151 0.57482 0.92607 0.70954 0.91206 0.81927 0.83584 0.91391 0.75479 0.75448 0.772810 0.87586 0.436151 0.619502 0.515166 0.68079673 0.563621 0.747701 0.75225 0.59630 0.66073 0.62655 0.70791 6 0.79131 0.81291 -0.0171718 12 0.70767 0.72133 -0.01366533 0.926938 0.3559753 insignificant 1 1.00000 insignificant 0.97851 0.6093759 insignificant 1 1.00000 insignificant -0.01062621 0.822513 insignificant 1 insignificant 0.79131 0.622291 0.167633 10 0.70767 0.611401 0.0962649 2.0675e-07 9.9574e-01 weaklyHypermeth 4.3988e-06 1.0000e+00 weaklyHypermeth 8.1517e-05 9.9863e-01 weaklyHypermeth 2.4702e-03 1.0000e+00 weaklyHypermeth 0.0979896 1.0763e-02 weaklyHypermeth 2.1525e-01 insignificant 0.79416 0.67595 0.1285632 12 0.73496 0.62592 0.10904067 1.2628e-10 0.9974715 weaklyHypermeth 2.5257e-08 1 weaklyHypermeth 9.6821e-06 0.97666323 weaklyHypermeth 2.4205e-03 1.00000 weaklyHypermeth 0.0190637 0.6857512 insignificant 1.00000 insignificant 0.81291 0.622291 0.181281 11 0.72133 0.611401 0.10993026 1.6281e-05 9.9964e-01 weaklyHypermeth 3.2024e-04 1.0000e+00 weaklyHypermeth 5.1075e-04 9.9993e-01 weaklyHypermeth 1.3504e-02 1.000e+00 weaklyHypermeth 0.1086158 2.0066e-02 weaklyHypermeth 3.6483e-01 insignificant 0.81444 0.67595 0.1574350 12 0.75139 0.62592 0.1254684 5.8462e-10 0.99982720 weaklyHypermeth 7.3078e-08 1.00000 weaklyHypermeth 2.7234e-04 0.999123 weaklyHypermeth 2.2695e-02 1 weaklyHypermeth 0.02968992 0.5720304 insignificant 1.00000 insignificant 0.623836 0.67595 -0.0305142 10 0.636876 0.62592 0.0109577 4.6726e-01 7.4301e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8882e-01 2.6250e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.078926 9.7417e-02 insignificant 1.00000000 insignificant chr11 1722551 1723551 105138 KRTAP5-6 ENSG00000205864 0.81613 87 5 0.67988 89 5 0.58889 57 5 0.95758 54 3 0.89429 30 3 0.88778 85 5 0.66667 41 3 0.76028 76 5 0.71419 49 5 0.97778 36 5 0.85744 144 5 0.59762 30 3 0.797381 113 5 NA 0 0 0.95143 38 5 0.46667 12 0 0.52103 39 5 0.77814 64 5 0.830078 109 5 0.74908 78 5 0.84281 57 5 0.74984 40 5 0.90667 59 5 0.92222 33 4 0.96364 29 3 0.86416 73 5 0.80461 58 5 0.79762 18 1 0.80383 83 5 0.87987 98 5 0.854945 79 5 0.93193 122 5 0.387406 127 5 0.441935 144 5 0.733567 69 2 0.577778 31 3 0.63939 47 4 0.555884 94 5 0.79102 58 5 0.80685 83 5 0.76594 68 4 0.82381 54 4 0.72810 85 5 0.82886 0.69234 0.61508 0.96011 0.86268 0.87840 0.65306 0.77294 0.68482 0.97619 0.86810 0.58807 0.801944 NA 0.95306 0.47279 0.50706 0.78549 0.810469 0.76457 0.83391 0.76304 0.91020 0.90420 0.97217 0.84928 0.78346 0.75984 0.80680 0.88977 0.852406 0.94156 0.391945 0.402190 0.744083 0.50425170 0.613636 0.611890 0.77811 0.82628 0.77237 0.80637 0.72339 1 0.79366 0.86782 -0.0760714 5 0.79020 0.86733 -0.07713061 0.999761 0.0015740 weaklyHypometh 1 0.32061 insignificant 0.99949 0.0036494 weaklyHypometh 1 0.65848 insignificant -0.09742507 0.017894 lowCoverage 1 lowCoverage 0.79366 0.572266 0.240535 5 0.79020 0.522488 0.2677161 1.6776e-09 9.9941e-01 hypermethylated 4.5341e-08 1.0000e+00 hypermethylated 1.1026e-03 9.9716e-01 weaklyHypermeth 2.3460e-02 1.0000e+00 weaklyHypermeth 0.2067584 7.7770e-03 lowCoverage 1.7885e-01 lowCoverage 0.79366 0.80747 -0.0014372 5 0.79020 0.78249 0.00771094 4.5980e-01 0.4623212 insignificant 1.0000e+00 1 insignificant 6.3567e-01 0.40100432 insignificant 1.0000e+00 1.00000 insignificant -0.0203910 0.5949701 lowCoverage 1.00000 lowCoverage 0.86782 0.572266 0.324976 5 0.86733 0.522488 0.34484667 6.2728e-11 1.0000e+00 hypermethylated 2.0909e-09 1.0000e+00 hypermethylated 1.1705e-05 1.0000e+00 hypermethylated 5.0889e-04 1.000e+00 hypermethylated 0.3041835 1.2438e-03 lowCoverage 4.4421e-02 lowCoverage 0.86782 0.80747 0.0767373 5 0.86733 0.78249 0.0848416 1.9804e-02 0.99100998 weaklyHypermeth 5.3523e-01 1.00000 insignificant 8.3097e-02 0.961362 insignificant 1.0000e+00 1 insignificant 0.07703403 0.0087345 lowCoverage 0.73332 lowCoverage 0.572266 0.80747 -0.2361991 5 0.522488 0.78249 -0.2600051 9.9992e-01 8.3895e-04 hypomethylated 1.0000e+00 1.9975e-02 hypomethylated 9.9714e-01 6.9048e-03 weaklyHypometh 1.0000e+00 1.9180e-01 insignificant -0.227149 5.8070e-03 lowCoverage 0.20024086 lowCoverage chr11 1807850 1808850 105139 ENSG00000217087 0.72723 162 10 0.65650 248 10 0.41775 105 8 0.81553 187 10 0.75731 54 1 0.70745 250 10 0.76833 99 2 0.82910 254 7 0.79077 100 7 0.90750 113 7 0.80971 297 10 0.78720 27 1 0.923291 239 8 0.90220 140 8 0.82098 76 3 0.56250 16 1 1.00000 2 0 0.77776 268 10 0.926512 300 10 0.81335 194 10 0.86346 96 7 0.89558 64 7 0.54130 71 2 0.89992 85 7 0.85820 93 7 0.86606 371 10 0.71257 71 6 0.77222 39 1 0.88685 295 9 0.90252 427 10 0.859447 471 10 0.80284 162 10 0.794939 148 8 0.690456 236 9 0.835681 424 9 0.703704 23 1 0.83771 189 8 0.777982 454 10 0.71732 164 7 0.77266 175 6 0.53486 162 5 0.30128 179 7 0.65692 153 6 0.82017 0.80128 0.64933 0.85668 0.75945 0.84878 0.83512 0.85224 0.78495 0.93497 0.89155 0.76015 0.890149 0.94510 0.89008 NA 0.85768 0.84086 0.869616 0.91780 0.97189 0.95019 0.79097 0.85373 0.89963 0.91293 0.78962 0.70089 0.89110 0.88065 0.868280 0.81805 0.751955 0.580562 0.682278 0.84116331 0.816242 0.647404 0.85963 0.84312 0.74718 0.64607 0.82435 1 0.83962 0.88107 -0.0366426 8 0.75729 0.83571 -0.07841132 0.994887 0.0799793 insignificant 1 1.00000 insignificant 0.97325 0.4595037 insignificant 1 1.00000 insignificant -0.03669963 0.394111 insignificant 1 insignificant 0.83988 0.744233 0.090517 8 0.82614 0.804322 0.0218168 1.3430e-04 3.2321e-01 weaklyHypermeth 2.3156e-03 1.0000e+00 weaklyHypermeth 1.8830e-01 2.3666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116375 7.7058e-01 insignificant 1.0000e+00 insignificant 0.83983 0.77311 0.1115843 3 0.80875 0.58873 0.22001834 2.1350e-10 0.9989444 lowCoverage 3.5584e-08 1 lowCoverage 2.6672e-04 0.98775162 lowCoverage 2.5219e-02 1.00000 lowCoverage 0.1884404 0.0868045 insignificant 1.00000 insignificant 0.88102 0.744233 0.098853 10 0.82077 0.804322 0.01644730 1.6332e-05 5.6778e-01 weaklyHypermeth 3.2024e-04 1.0000e+00 weaklyHypermeth 1.1448e-01 2.4195e-01 insignificant 1.0000e+00 1.000e+00 insignificant 0.0483371 2.4539e-01 insignificant 1.0000e+00 insignificant 0.88175 0.77311 0.1647792 5 0.86951 0.58873 0.2807786 1.7758e-15 0.99996964 weaklyHypermeth 4.4396e-13 1.00000 weaklyHypermeth 1.8245e-05 0.999675 weaklyHypermeth 2.6064e-03 1 weaklyHypermeth 0.22514007 0.0518411 insignificant 1.00000 insignificant 0.744060 0.77311 -0.0625706 5 0.784754 0.58873 0.1960199 6.8789e-07 3.5381e-01 inconclusive 1.3227e-04 1.0000e+00 inconclusive 2.8041e-04 9.3654e-01 inconclusive 4.6735e-02 1.0000e+00 inconclusive 0.176803 1.0251e-01 insignificant 1.00000000 insignificant chr11 1854509 1855509 105141 LSP1 ENSG00000130592 0.72912 214 7 0.48839 70 5 0.48214 53 4 0.69004 118 6 0.62353 29 1 0.60626 150 5 0.14796 40 1 0.73531 65 6 0.38542 36 2 0.73611 28 1 0.66263 121 6 0.73611 15 1 0.466667 34 3 0.42857 33 3 0.59739 37 3 0.00000 6 0 1.00000 1 0 0.55765 320 6 0.438472 80 4 0.64604 134 4 0.43653 68 4 0.51515 44 1 0.60738 67 4 0.55238 47 4 0.40009 224 6 0.35110 80 4 0.69837 98 5 0.40476 29 2 0.72298 66 4 0.43129 87 4 0.527904 106 4 0.68977 129 4 0.044837 141 6 0.012838 131 5 0.078431 61 4 0.075622 136 5 0.12618 126 8 0.146481 178 6 0.58174 101 4 0.49032 139 5 0.60971 105 6 0.57525 74 3 0.38203 136 8 0.59010 0.37476 0.27984 0.52674 0.37147 0.37754 0.16243 0.50809 0.36758 0.46119 0.51014 0.54987 0.317808 0.43151 0.26057 0.23388 NA 0.24852 0.339141 0.46821 0.43485 0.21544 0.41650 0.32078 0.35931 0.31558 0.27325 0.63182 0.31761 0.31940 0.264031 0.45369 0.141896 0.037949 0.502820 0.20900715 0.140030 0.069841 0.49894 0.45613 0.44481 0.46382 0.18173 1 0.55889 0.48362 0.0163449 4 0.49065 0.50460 -0.01394935 0.383842 0.2849259 lowCoverage 1 1.00000 lowCoverage 0.52381 0.2942315 lowCoverage 1 1.00000 lowCoverage 0.02974879 0.632854 lowCoverage 1 lowCoverage 0.55889 0.082902 0.464232 4 0.49065 0.108840 0.3818117 9.4234e-25 1.0000e+00 lowCoverage 1.3462e-22 1.0000e+00 lowCoverage 2.8817e-08 9.5443e-01 lowCoverage 2.6198e-06 1.0000e+00 lowCoverage 0.4771602 5.0242e-09 lowCoverage 1.2561e-06 lowCoverage 0.59553 0.52708 0.0755500 3 0.69479 0.48922 0.20556935 8.1651e-03 0.9884624 lowCoverage 2.3149e-01 1 lowCoverage 1.2360e-01 0.97868096 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0300814 0.6469037 lowCoverage 1.00000 lowCoverage 0.48316 0.082794 0.378245 6 0.45873 0.098945 0.35978272 5.2377e-22 9.8426e-01 hypermethylated 6.5472e-20 1.0000e+00 hypermethylated 2.9291e-08 9.9385e-01 hypermethylated 3.6613e-06 1.000e+00 hypermethylated 0.4474114 1.6454e-08 lowCoverage 3.2908e-06 lowCoverage 0.48397 0.49697 0.0263553 3 0.51305 0.38794 0.1251090 2.7894e-03 0.59249115 lowCoverage 9.4758e-02 1.00000 lowCoverage 3.0167e-01 0.834222 lowCoverage 1.0000e+00 1 lowCoverage 0.00033266 0.9953423 lowCoverage 1.00000 lowCoverage 0.084321 0.49798 -0.4020503 3 0.136050 0.43643 -0.3003822 1.0000e+00 1.3763e-11 lowCoverage 1.0000e+00 2.7526e-09 lowCoverage 9.1081e-01 3.2529e-04 lowCoverage 1.0000e+00 1.9135e-02 lowCoverage -0.447079 8.0397e-05 hypomethylated 0.01339952 hypomethylated chr11 1945140 1946140 105145 MRPL23 ENSG00000214026 0.86083 323 15 0.68719 450 15 0.74692 496 16 0.90390 402 17 0.84014 349 15 0.79103 503 16 0.84314 416 15 0.80147 395 15 0.83335 464 14 0.81557 403 16 0.78720 487 18 0.57815 314 11 0.822929 517 15 0.89064 270 11 0.74571 394 14 0.62838 168 9 0.72091 439 7 0.66196 463 15 0.868105 515 16 0.85492 373 15 0.80054 235 17 0.57409 284 13 0.78607 406 16 0.70700 264 15 0.85712 297 13 0.88993 552 18 0.78412 346 14 0.81995 263 14 0.84136 500 15 0.92511 553 15 0.879339 616 18 0.83784 502 15 0.641517 472 18 0.671315 518 18 0.780760 425 13 0.648493 160 8 0.59426 463 18 0.643152 590 18 0.68729 352 15 0.60707 394 16 0.55401 240 13 0.47363 452 15 0.75570 305 15 0.84179 0.76682 0.76530 0.89244 0.80489 0.89916 0.82870 0.84294 0.84673 0.88700 0.89356 0.78255 0.846553 0.81780 0.83838 0.80658 0.78389 0.67196 0.849182 0.87589 0.84546 0.54594 0.83838 0.81974 0.82854 0.89235 0.80912 0.92026 0.81358 0.89168 0.847589 0.91906 0.524463 0.561657 0.750381 0.53297994 0.697173 0.526125 0.65313 0.59201 0.60610 0.43508 0.76227 8 0.83016 0.84074 -0.0093739 15 0.80882 0.81159 -0.00277698 0.994237 0.4118278 insignificant 1 1.00000 insignificant 0.99999 0.1804401 insignificant 1 1.00000 insignificant -0.02441579 0.475426 insignificant 1 insignificant 0.82999 0.654359 0.212178 15 0.78413 0.582733 0.2013995 5.9452e-16 9.9896e-01 hypermethylated 2.4772e-14 1.0000e+00 hypermethylated 6.8582e-06 9.9981e-01 hypermethylated 2.9818e-04 1.0000e+00 hypermethylated 0.1208738 3.0413e-03 weaklyHypermeth 8.6895e-02 weaklyHypermeth 0.83115 0.59725 0.2404593 14 0.83431 0.58743 0.24687141 5.2678e-31 1.0000000 hypermethylated 5.2678e-28 1 hypermethylated 3.1502e-12 0.99999999 hypermethylated 3.1502e-09 1.00000 hypermethylated 0.1685803 0.0225220 weaklyHypermeth 0.90088 insignificant 0.84067 0.654608 0.209899 16 0.79764 0.604315 0.19332287 1.0049e-11 1.0000e+00 hypermethylated 3.8649e-10 1.0000e+00 hypermethylated 1.4372e-08 1.0000e+00 hypermethylated 2.3953e-06 1.000e+00 hypermethylated 0.1452896 1.5420e-03 weaklyHypermeth 5.2382e-02 weaklyHypermeth 0.84245 0.59736 0.2439623 15 0.81919 0.59576 0.2234242 9.5748e-25 0.99999998 hypermethylated 9.5748e-22 1.00000 hypermethylated 8.1811e-12 1.000000 hypermethylated 8.1811e-09 1 hypermethylated 0.19299614 0.0122428 weaklyHypermeth 0.87449 insignificant 0.656202 0.59759 -0.0045194 15 0.643175 0.61414 0.0290390 4.9108e-05 7.0203e-01 inconclusive 7.0154e-03 1.0000e+00 inconclusive 7.0825e-02 7.3132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.047707 4.2374e-01 insignificant 1.00000000 insignificant chr11 1948167 1949167 105146 MRPL23 ENSG00000214026 0.88919 752 19 0.67573 490 16 0.73448 651 18 0.76703 475 15 0.85050 326 13 0.86125 485 19 0.71594 587 17 0.81904 460 17 0.73941 547 17 0.88776 492 17 0.78904 577 17 0.79446 465 17 0.809574 609 17 0.78943 96 4 0.70278 462 17 0.73723 251 15 0.58833 293 12 0.71426 1119 19 0.866260 588 19 0.83108 679 17 0.90087 232 13 0.82356 201 13 0.74150 486 17 0.86396 223 13 0.86467 251 5 0.79202 650 19 0.86967 339 15 0.75629 271 14 0.82078 529 15 0.76658 647 18 0.793523 580 17 0.85747 742 19 0.735377 553 18 0.669933 583 17 0.685181 466 16 0.693202 312 16 0.63296 296 15 0.672416 854 20 0.79025 574 20 0.71297 751 20 0.69096 489 14 0.59034 874 18 0.77378 448 19 0.87885 0.83993 0.80571 0.81158 0.81297 0.90066 0.84118 0.86154 0.77497 0.90225 0.87602 0.84632 0.840665 NA 0.87528 0.82578 0.73488 0.79886 0.882207 0.87658 0.90997 0.85903 0.84982 0.89859 0.90394 0.84148 0.85111 0.79822 0.88216 0.82509 0.853951 0.89626 0.779748 0.686099 0.715494 0.71198929 0.777573 0.616522 0.80216 0.75383 0.73286 0.61586 0.78101 11 0.82992 0.85750 -0.0270820 17 0.74697 0.77968 -0.03271052 0.991834 0.0031236 weaklyHypometh 1 0.52060 insignificant 0.99971 0.0141176 weaklyHypometh 1 1.00000 insignificant -0.04276917 0.071387 insignificant 1 insignificant 0.82998 0.732289 0.090120 19 0.75771 0.626759 0.1309495 9.9307e-09 1.0833e-01 weaklyHypermeth 2.5463e-07 1.0000e+00 weaklyHypermeth 4.2226e-02 9.8924e-02 weaklyHypermeth 5.4136e-01 1.0000e+00 insignificant 0.0966275 2.9543e-04 weaklyHypermeth 1.6413e-02 weaklyHypermeth 0.82977 0.70016 0.1161269 19 0.71423 0.69306 0.02116765 1.5682e-12 0.9923792 weaklyHypermeth 5.2274e-10 1 weaklyHypermeth 1.3203e-05 0.87919403 weaklyHypermeth 2.6405e-03 1.00000 weaklyHypermeth 0.0664797 0.1429627 insignificant 1.00000 insignificant 0.85748 0.732289 0.110215 17 0.77010 0.626759 0.14334313 7.9284e-06 8.5675e-01 weaklyHypermeth 1.6518e-04 1.0000e+00 weaklyHypermeth 7.6764e-03 8.6865e-01 weaklyHypermeth 1.3235e-01 1.000e+00 insignificant 0.1393967 5.9226e-06 weaklyHypermeth 5.9226e-04 weaklyHypermeth 0.85761 0.70006 0.1377523 17 0.78238 0.67911 0.1032686 1.6079e-15 0.99946698 weaklyHypermeth 4.4396e-13 1.00000 weaklyHypermeth 1.1683e-07 0.997373 weaklyHypermeth 3.8942e-05 1 weaklyHypermeth 0.10924889 0.0328188 weaklyHypermeth 1.00000 insignificant 0.732528 0.70006 -0.0058622 19 0.655248 0.67911 -0.0238629 2.3739e-04 2.9234e-01 inconclusive 2.9674e-02 1.0000e+00 inconclusive 8.2364e-02 3.4326e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.030148 4.6271e-01 insignificant 1.00000000 insignificant chr11 1987807 1988807 105148 MIR675 ENSG00000130600 0.83082 100 6 0.76531 83 5 0.68511 186 7 0.85649 164 7 0.66894 111 8 0.58859 196 8 0.46428 110 6 0.83683 190 8 0.77198 124 8 0.76247 180 8 0.78689 272 8 0.63692 66 6 0.798926 175 8 0.77555 113 7 0.74756 164 7 0.66161 104 6 0.00000 11 1 0.78753 187 7 0.852416 211 8 0.79071 153 8 0.70706 125 8 0.73422 115 8 0.82146 98 7 0.79590 125 8 0.83698 96 7 0.87299 189 8 0.71096 234 8 0.56548 96 7 0.78223 142 8 0.79173 187 8 0.821771 144 8 0.82515 150 8 0.586874 157 7 0.643184 146 7 0.526099 229 5 0.752976 22 1 0.38991 261 8 0.794576 221 7 0.76234 159 6 0.77431 127 5 0.83830 123 7 0.81900 83 5 0.81109 143 6 0.90763 0.67071 0.81431 0.94689 0.77079 0.81942 0.68331 0.89474 0.86389 0.88823 0.81790 0.73188 0.871097 0.86290 0.85171 0.85995 0.55897 0.79463 0.909726 0.87765 0.81969 0.81680 0.94153 0.86437 0.80922 0.91672 0.71386 0.77926 0.86671 0.85756 0.869789 0.90895 0.573632 0.622381 0.489767 0.80477885 0.510985 0.610047 0.90372 0.87057 0.87262 0.80604 0.81182 5 0.82988 0.80188 0.0050545 8 0.76813 0.76403 0.00410053 0.207305 0.5728781 insignificant 1 1.00000 insignificant 0.72280 0.0362947 inconclusive 1 1.00000 insignificant -0.06871516 0.173355 insignificant 1 insignificant 0.82931 0.541506 0.287512 8 0.61450 0.624839 -0.0103362 8.4985e-14 1.0000e+00 hypermethylated 3.1476e-12 1.0000e+00 hypermethylated 2.9951e-03 9.3581e-01 weaklyHypermeth 5.8727e-02 1.0000e+00 weaklyHypermeth 0.0878421 2.6484e-01 insignificant 1.0000e+00 insignificant 0.82960 0.86614 -0.0135709 5 0.68278 0.79914 -0.11635610 7.1877e-01 0.7490940 insignificant 1.0000e+00 1 insignificant 8.4574e-01 0.46733130 insignificant 1.0000e+00 1.00000 insignificant -0.0975607 0.0423228 weaklyHypometh 1.00000 insignificant 0.80188 0.540619 0.281297 8 0.76403 0.531049 0.23297918 1.8669e-10 9.9993e-01 hypermethylated 5.3340e-09 1.0000e+00 hypermethylated 3.2854e-04 9.9671e-01 hypermethylated 9.5143e-03 1.000e+00 hypermethylated 0.1565572 5.0262e-02 insignificant 7.8534e-01 insignificant 0.80188 0.86593 -0.0134379 5 0.76403 0.77403 -0.0100011 8.1304e-01 0.57451437 insignificant 1.0000e+00 1.00000 insignificant 7.0601e-01 0.834500 insignificant 1.0000e+00 1 insignificant -0.02884559 0.3154408 insignificant 1.00000 insignificant 0.541063 0.86614 -0.3128791 5 0.583155 0.79914 -0.2159825 1.0000e+00 3.3503e-05 hypomethylated 1.0000e+00 1.2408e-03 hypomethylated 9.9950e-01 2.0955e-02 weaklyHypometh 1.0000e+00 3.9287e-01 insignificant -0.185403 2.7748e-02 weaklyHypometh 0.55495928 insignificant chr11 2706241 2707241 105159 KCNQ1 ENSG00000053918 0.89726 316 5 0.62995 227 5 0.83784 210 5 0.95805 228 5 0.97925 134 5 0.73478 413 5 0.89892 168 5 0.85169 231 7 0.75531 125 6 0.84423 154 4 0.95422 460 7 0.72002 76 4 0.897480 215 7 0.96397 93 4 0.86068 165 5 0.65408 60 2 0.63333 22 1 0.76086 453 5 0.924753 321 7 0.73254 372 5 0.92785 227 6 0.69521 67 4 0.79117 174 5 0.97302 105 4 0.78567 60 4 0.91582 390 7 0.90642 177 7 0.76320 93 5 0.91700 327 7 0.94918 345 7 0.946807 379 7 0.79390 352 5 0.580066 236 6 0.807350 303 7 0.893431 284 4 0.688889 14 1 0.78464 150 6 0.827139 393 7 0.89791 265 5 0.83427 246 6 0.70657 246 5 0.67473 257 6 0.85926 197 5 0.91819 0.77131 0.90558 0.94532 0.95657 0.88519 0.87581 0.84507 0.87292 0.89843 0.96812 0.92730 0.903795 0.93953 0.93534 0.94401 NA 0.90371 0.904101 0.93196 0.91394 0.89172 0.89218 0.94762 0.79571 0.92480 0.89323 0.94956 0.86180 0.94104 0.965984 0.92371 0.679707 0.709767 0.871337 0.63318836 0.826548 0.768054 0.89256 0.92593 0.88400 0.93996 0.85123 4 0.90457 0.92056 -0.0165633 6 0.76931 0.84371 -0.07440507 0.989392 0.0428678 weaklyHypometh 1 1.00000 insignificant 0.95945 0.1653408 insignificant 1 1.00000 insignificant -0.03930930 0.293830 lowCoverage 1 lowCoverage 0.90477 0.800725 0.105733 6 0.87921 0.809185 0.0700247 8.2561e-10 9.6069e-01 weaklyHypermeth 2.2934e-08 1.0000e+00 weaklyHypermeth 6.0379e-05 9.6541e-01 weaklyHypermeth 1.9201e-03 1.0000e+00 weaklyHypermeth 0.0608752 2.7628e-01 lowCoverage 1.0000e+00 lowCoverage 0.90477 0.89100 0.0187793 5 0.87921 0.74280 0.13641000 1.8759e-03 0.9368554 weaklyHypermeth 6.2530e-02 1 weaklyHypermeth 4.6660e-02 0.96590556 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0299114 0.5742130 lowCoverage 1.00000 lowCoverage 0.92122 0.800725 0.121837 6 0.91662 0.809185 0.10744004 2.2637e-09 9.9997e-01 weaklyHypermeth 6.2881e-08 1.0000e+00 weaklyHypermeth 1.2817e-05 9.9993e-01 weaklyHypermeth 5.3403e-04 1.000e+00 weaklyHypermeth 0.1001845 9.2028e-02 insignificant 1.0000e+00 insignificant 0.92122 0.89100 0.0343556 5 0.91662 0.74280 0.1738253 6.6598e-06 0.97412223 weaklyHypermeth 6.0543e-04 1.00000 weaklyHypermeth 3.2306e-02 0.936653 weaklyHypermeth 1.0000e+00 1 insignificant 0.06922066 0.2183501 insignificant 1.00000 insignificant 0.800725 0.89100 -0.0880460 5 0.809185 0.74280 0.0663853 2.0560e-01 9.5879e-03 weaklyHypometh 1.0000e+00 1.5219e-01 insignificant 8.0603e-01 3.5777e-02 weaklyHypometh 1.0000e+00 5.7704e-01 insignificant -0.030964 6.3666e-01 insignificant 1.00000000 insignificant chr11 2724487 2725487 105160 KCNQ1 ENSG00000053918 0.92571 203 6 0.67959 143 5 0.81310 126 5 0.94174 124 6 0.93256 76 5 0.84472 174 5 0.90469 168 5 0.85590 93 5 0.88907 94 5 0.92708 77 5 0.85897 191 5 0.94090 119 5 0.895960 120 5 0.90000 20 1 0.94735 111 5 0.96443 98 5 0.91381 65 4 0.90260 81 5 0.968783 79 6 0.91517 129 5 0.81460 57 5 0.63838 31 4 0.91691 151 5 0.90714 75 5 0.72643 42 4 0.81785 157 6 0.90578 113 5 0.93333 48 5 0.91369 56 5 0.78880 156 6 0.924055 182 5 0.92241 277 8 0.433553 74 5 0.763406 73 5 0.333333 62 3 0.263080 165 8 0.74709 98 5 0.122819 218 6 0.67495 271 8 0.63206 231 6 0.83768 158 6 0.85672 187 5 0.77254 198 8 0.91409 0.66147 0.80804 0.93147 0.95369 0.84908 0.90250 0.83708 0.87743 0.92903 0.87806 0.94430 0.890644 NA 0.94430 0.95455 0.90029 0.85135 0.928452 0.84690 0.81256 0.74929 0.86590 0.89911 0.84812 0.92349 0.89312 0.95667 0.90465 0.93923 0.851238 0.93030 0.501837 0.783605 0.511667 0.08342657 0.735441 0.056188 0.60725 0.65696 0.83601 0.89613 0.79099 4 0.88821 0.90402 -0.0153203 5 0.90579 0.90431 0.00148606 0.438578 0.4273425 insignificant 1 1.00000 insignificant 0.58054 0.8139227 insignificant 1 1.00000 insignificant 0.04532429 0.161085 lowCoverage 1 lowCoverage 0.88821 0.351234 0.512399 5 0.90579 0.325600 0.5801929 9.1844e-32 1.0000e+00 hypermethylated 2.2961e-29 1.0000e+00 hypermethylated 6.1437e-10 1.0000e+00 hypermethylated 1.2287e-07 1.0000e+00 hypermethylated 0.4522260 7.8694e-03 lowCoverage 1.7885e-01 lowCoverage 0.88821 0.71388 0.1750883 5 0.90579 0.69633 0.20946610 3.3227e-12 0.9999502 weaklyHypermeth 8.3067e-10 1 weaklyHypermeth 5.0363e-06 0.99999847 weaklyHypermeth 1.6788e-03 1.00000 weaklyHypermeth 0.1413167 0.0295273 lowCoverage 1.00000 lowCoverage 0.90335 0.350725 0.534904 5 0.82210 0.296000 0.52609717 4.3109e-19 1.0000e+00 hypermethylated 4.7899e-17 1.0000e+00 hypermethylated 5.1852e-07 1.0000e+00 hypermethylated 4.7138e-05 1.000e+00 hypermethylated 0.4069017 1.1295e-02 weaklyHypermeth 2.3052e-01 insignificant 0.90402 0.71388 0.2009992 5 0.90431 0.69633 0.2079800 1.6633e-08 0.99985323 hypermethylated 1.6633e-06 1.00000 hypermethylated 1.4887e-03 0.999889 weaklyHypermeth 9.3041e-02 1 weaklyHypermeth 0.09599241 0.1055346 insignificant 1.00000 insignificant 0.351234 0.71388 -0.3599914 6 0.325600 0.69633 -0.3707269 1.0000e+00 9.3777e-09 hypomethylated 1.0000e+00 1.3397e-06 hypomethylated 9.9999e-01 1.4783e-03 weaklyHypometh 1.0000e+00 7.0397e-02 weaklyHypometh -0.310909 3.2782e-02 weaklyHypometh 0.62110374 insignificant chr11 2789950 2790950 105164 ENSG00000218400 0.63161 177 8 0.40895 213 11 0.47791 290 12 0.56925 88 10 0.57972 159 9 0.75016 160 9 0.62792 203 9 0.48182 174 10 0.48873 185 9 0.69294 210 9 0.65227 268 10 0.62615 146 9 0.284651 196 10 0.55976 50 5 0.50807 216 9 0.70024 154 9 0.27944 134 5 0.35753 204 9 0.439076 287 9 0.49402 186 10 0.74053 155 9 0.54340 48 5 0.59371 187 11 0.71872 66 9 0.65451 47 5 0.53345 284 12 0.61700 233 8 0.53845 102 9 0.63226 250 9 0.37763 220 11 0.504523 202 12 0.78780 124 10 0.018400 234 11 0.048515 268 10 0.011989 354 10 0.000000 12 0 0.10455 100 9 0.083714 271 11 0.51609 197 10 0.52717 104 9 0.70670 148 7 0.38249 207 5 0.60923 53 6 0.81312 0.47202 0.43299 0.62908 0.53905 0.75749 0.77567 0.64836 0.58971 0.76845 0.67358 0.77961 0.315382 0.65617 0.63873 0.88345 0.51036 0.51618 0.489748 0.66183 0.79593 0.56593 0.70343 0.62823 0.73284 0.68353 0.62701 0.53626 0.71048 0.42835 0.596314 0.79207 0.004274 0.014773 0.022544 0.00015828 0.027066 0.032971 0.65348 0.58849 0.62047 0.46588 0.72756 5 0.58459 0.60323 -0.0309937 10 0.52975 0.56410 -0.03434797 0.990113 0.1136296 insignificant 1 1.00000 insignificant 0.99841 0.0122079 weaklyHypometh 1 1.00000 insignificant -0.07298902 0.112271 insignificant 1 insignificant 0.58459 0.029863 0.555311 10 0.52975 0.044588 0.4851595 1.6100e-57 1.0000e+00 hypermethylated 8.0500e-55 1.0000e+00 hypermethylated 8.7499e-22 1.0000e+00 hypermethylated 8.7499e-19 1.0000e+00 hypermethylated 0.4859838 4.7186e-13 hypermethylated 2.3593e-10 hypermethylated 0.58459 0.56276 0.0531973 7 0.52975 0.50126 0.02848613 5.6964e-02 0.1163954 insignificant 1.0000e+00 1 insignificant 1.3532e-01 0.12609754 insignificant 1.0000e+00 1.00000 insignificant -0.0178231 0.7805562 insignificant 1.00000 insignificant 0.60323 0.029863 0.575159 10 0.56410 0.044588 0.51950748 8.0563e-55 1.0000e+00 hypermethylated 8.0563e-52 1.0000e+00 hypermethylated 1.4507e-20 1.0000e+00 hypermethylated 1.4507e-17 1.000e+00 hypermethylated 0.5589728 1.3940e-10 hypermethylated 3.4850e-08 hypermethylated 0.60323 0.56276 0.0744428 7 0.56410 0.50126 0.0628341 4.9228e-03 0.64167911 weaklyHypermeth 1.5384e-01 1.00000 insignificant 5.0256e-02 0.910429 insignificant 1.0000e+00 1 insignificant 0.05516592 0.4097857 insignificant 1.00000 insignificant 0.029863 0.56276 -0.5386984 7 0.044588 0.50126 -0.4566734 9.9998e-01 5.2315e-32 hypomethylated 1.0000e+00 5.2315e-29 hypomethylated 1.0000e+00 1.7161e-11 hypomethylated 1.0000e+00 8.5805e-09 hypomethylated -0.503807 3.5383e-04 hypomethylated 0.03903467 hypomethylated chr11 3386048 3387048 105167 ENSG00000220802 0.35932 1016 6 0.30735 1085 6 0.21875 734 6 0.32178 1020 6 0.16967 461 6 0.29622 1471 6 0.19571 798 6 0.32205 889 6 0.35645 603 6 0.18278 517 6 0.36454 661 6 0.25486 289 6 0.143803 505 6 0.24039 229 6 0.25637 689 6 0.41387 265 6 0.10005 393 5 0.37464 1337 6 0.166989 524 6 0.15239 979 6 0.24155 274 6 0.25268 576 6 0.33030 808 6 0.22193 335 6 0.35401 547 6 0.22550 971 6 0.28712 495 6 0.22453 207 6 0.22206 633 6 0.32280 1293 6 0.318004 1014 6 0.27462 1044 6 0.153463 898 6 0.365162 435 6 0.522829 430 6 0.215333 251 5 0.26047 553 6 0.306438 1131 6 0.27501 1400 6 0.29737 1162 6 0.13312 1208 6 0.30188 1165 6 0.29820 1137 6 0.39056 0.32098 0.23381 0.34534 0.24571 0.30257 0.20695 0.33420 0.25582 0.19417 0.35924 0.25489 0.167121 0.24708 0.27899 0.42603 0.14504 0.39426 0.188837 0.21926 0.32161 0.28842 0.34674 0.29700 0.39550 0.25013 0.30636 0.24444 0.31257 0.22994 0.355103 0.38347 0.191084 0.464227 0.608505 0.27543623 0.324320 0.388445 0.31570 0.34814 0.16388 0.31612 0.33660 6 0.28870 0.31146 -0.0228168 6 0.23087 0.24223 -0.01136025 0.875699 0.1702953 insignificant 1 1.00000 insignificant 0.94589 0.0651667 insignificant 1 1.00000 insignificant -0.01302623 0.601976 insignificant 1 insignificant 0.28879 0.354516 -0.068330 6 0.27450 0.289277 -0.0147790 6.1915e-04 2.5346e-04 weaklyHypometh 9.2411e-03 4.2244e-02 weaklyHypometh 2.5563e-03 5.6039e-04 weaklyHypometh 5.2169e-02 9.3398e-02 weaklyHypometh -0.0440513 4.6446e-01 insignificant 1.0000e+00 insignificant 0.28879 0.30781 -0.0097071 6 0.27450 0.26047 0.01402663 9.7685e-02 0.4625972 insignificant 1.0000e+00 1 insignificant 1.9565e-01 0.20294764 insignificant 1.0000e+00 1.00000 insignificant -0.0012160 0.9754511 insignificant 1.00000 insignificant 0.31182 0.354516 -0.045654 6 0.28965 0.289277 0.00036802 8.4736e-03 1.7971e-02 weaklyHypometh 9.6291e-02 1.0000e+00 weaklyHypometh 7.9831e-03 2.8046e-02 weaklyHypometh 1.3531e-01 1.000e+00 insignificant -0.0310250 5.9246e-01 insignificant 1.0000e+00 insignificant 0.31182 0.30781 0.0137931 6 0.28965 0.26047 0.0291736 6.6741e-02 0.91197436 insignificant 1.0000e+00 1.00000 insignificant 1.0707e-01 0.819125 insignificant 1.0000e+00 1 insignificant 0.01181021 0.7497743 insignificant 1.00000 insignificant 0.354516 0.30781 0.0641846 6 0.289277 0.26047 0.0288056 1.7345e-01 1.4291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2362e-01 2.1825e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.042835 5.0932e-01 insignificant 1.00000000 insignificant chr11 3594592 3595592 105182 ENSG00000215103 0.89524 230 5 0.82339 140 5 0.93889 62 8 0.90682 177 5 0.76230 55 2 0.99107 232 5 0.87913 89 8 0.93277 81 5 0.85238 36 3 1.00000 29 4 0.93813 225 8 0.84028 25 1 0.812500 36 3 0.51852 35 4 0.86389 50 5 NA 0 0 NA 0 0 0.82965 178 5 0.976961 143 5 0.94363 169 5 0.82904 58 5 0.93750 17 1 0.76580 121 5 0.77778 29 0 0.97149 83 4 0.93651 194 8 0.92143 64 5 0.73260 52 4 0.85897 149 5 0.89471 185 5 0.965741 201 6 0.96720 195 5 0.866613 139 8 0.835387 139 8 0.750000 7 0 0.892188 47 4 0.69379 84 5 0.849747 181 5 0.83057 241 5 0.81311 206 5 0.90138 178 5 0.87240 198 5 0.87843 181 5 0.87054 0.71579 0.96720 0.88614 0.93216 0.96259 0.64393 0.89286 0.91111 1.00000 0.85873 0.66931 0.791667 0.98413 0.90608 NA NA 0.83936 0.916153 0.90267 0.87447 0.93711 0.88389 0.98810 0.97293 0.82389 0.94354 0.90319 0.89792 0.91061 0.936155 0.93835 0.806329 0.614513 0.893634 NA 0.774852 0.836185 0.86092 0.91958 0.85605 0.88506 0.91041 0 0.88052 0.88872 -0.0087923 5 0.80681 0.78211 0.02469638 0.769928 0.5310777 insignificant 1 1.00000 insignificant 0.93098 0.7452630 insignificant 1 1.00000 insignificant -0.00736753 0.838577 lowCoverage 1 lowCoverage 0.88209 0.797320 0.092477 5 0.92011 0.745034 0.1750801 2.7660e-02 9.8646e-01 weaklyHypermeth 2.8516e-01 1.0000e+00 insignificant 5.9763e-02 9.8265e-01 insignificant 7.0309e-01 1.0000e+00 insignificant 0.0579091 1.7818e-01 lowCoverage 1.0000e+00 lowCoverage 0.88203 0.83765 0.0365713 5 0.91013 0.88780 0.02232959 3.6780e-01 0.5768050 insignificant 1.0000e+00 1 insignificant 3.7316e-01 0.77252267 insignificant 1.0000e+00 1.00000 insignificant 0.0133519 0.6679521 lowCoverage 1.00000 lowCoverage 0.89179 0.797320 0.102252 5 0.88328 0.745034 0.13825085 6.7285e-03 9.9886e-01 weaklyHypermeth 8.0101e-02 1.0000e+00 weaklyHypermeth 4.2022e-02 9.9513e-01 weaklyHypermeth 5.0629e-01 1.000e+00 insignificant 0.0652766 1.2810e-01 lowCoverage 1.0000e+00 lowCoverage 0.89230 0.83765 0.0476104 5 0.91036 0.88780 0.0225633 8.2108e-02 0.90452282 insignificant 1.0000e+00 1.00000 insignificant 9.2833e-02 0.974666 insignificant 1.0000e+00 1 insignificant 0.02071939 0.4931140 lowCoverage 1.00000 lowCoverage 0.798658 0.83765 -0.0582919 5 0.838163 0.88780 -0.0496356 7.2000e-01 1.8302e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3076e-01 5.4017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.044557 2.4335e-01 insignificant 1.00000000 insignificant chr11 3872552 3873552 105199 ENSG00000176992 0.79965 68 7 0.84220 205 8 0.77083 48 8 0.85458 61 4 0.67614 47 4 0.86870 131 8 0.84226 74 8 0.87368 54 7 0.76894 56 5 0.81250 37 4 0.86870 293 8 1.00000 9 0 0.831439 64 5 0.88889 33 5 0.81293 35 5 0.75000 12 0 0.75000 8 0 0.70370 28 1 0.937500 44 7 0.84524 30 1 0.85185 23 0 0.90000 8 0 0.83785 53 4 0.86310 45 7 0.98611 18 1 0.82210 219 8 0.95000 15 1 0.80000 6 0 0.84091 63 8 0.65824 200 8 0.773214 201 8 0.88017 130 7 0.947164 98 4 0.868687 43 2 0.757097 215 8 0.500000 11 0 0.82059 56 4 0.753598 140 8 0.85766 102 8 0.82803 117 8 0.84708 75 8 0.85714 20 1 0.76009 122 8 0.71839 0.84042 0.68939 0.79591 0.53306 0.84801 0.77597 0.87744 0.78306 0.83766 0.84247 0.81114 0.921229 0.84848 0.77597 0.75758 0.84534 0.90909 0.901515 0.83712 0.80303 0.91855 0.81913 0.86797 0.98295 0.78778 0.92991 0.83305 0.78099 0.79111 0.722186 0.83772 0.953036 0.793388 0.836414 0.56508264 0.854278 0.724217 0.78624 0.70961 0.84909 0.86364 0.77919 0 0.85928 0.87360 0.0050486 8 0.85127 0.78222 0.06905550 0.535239 0.5650441 insignificant 1 1.00000 insignificant 0.86286 0.4844234 insignificant 1 1.00000 insignificant -0.02206885 0.465813 lowCoverage 1 lowCoverage 0.85950 0.854352 0.029129 7 0.85697 0.826085 0.0308869 2.8639e-02 2.9644e-01 weaklyHypermeth 2.9046e-01 1.0000e+00 insignificant 3.5183e-01 7.0918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0503711 4.6707e-01 lowCoverage 1.0000e+00 lowCoverage 0.85928 0.86697 0.0158111 8 0.85127 0.85030 0.00097341 5.5033e-01 0.6369462 insignificant 1.0000e+00 1 insignificant 8.0892e-01 0.61306777 insignificant 1.0000e+00 1.00000 insignificant -0.0051073 0.8415720 lowCoverage 1.00000 lowCoverage 0.87423 0.854352 0.041519 7 0.79506 0.826085 -0.03102657 3.0648e-02 3.3680e-01 weaklyHypermeth 3.0958e-01 1.0000e+00 insignificant 1.3205e-01 7.7813e-01 insignificant 1.0000e+00 1.000e+00 insignificant 0.0724399 3.1770e-01 lowCoverage 1.0000e+00 lowCoverage 0.87360 0.86697 0.0119899 8 0.78222 0.85030 -0.0680821 4.5062e-01 0.59500512 insignificant 1.0000e+00 1.00000 insignificant 5.8293e-01 0.759293 insignificant 1.0000e+00 1 insignificant 0.01696151 0.5859536 lowCoverage 1.00000 lowCoverage 0.854352 0.86667 -0.0284600 7 0.826085 0.83367 -0.0075832 4.9411e-01 4.7806e-02 weaklyHypometh 1.0000e+00 5.6242e-01 insignificant 7.1182e-01 3.1181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.055478 4.2729e-01 lowCoverage 1.00000000 lowCoverage chr11 3948208 3949208 105206 ENSG00000206976 0.77472 112 5 0.45554 184 5 0.63929 37 5 0.74280 120 5 0.69147 33 4 0.76656 203 5 0.71238 30 5 0.43494 123 5 0.55812 66 4 0.65500 27 3 0.78903 153 5 0.81746 22 3 0.789157 91 5 0.80000 35 5 0.84087 44 5 0.44792 21 0 0.80000 5 0 0.74343 136 5 0.781927 132 5 0.72632 95 5 0.40000 21 2 0.52500 21 2 0.76796 71 5 0.65333 18 2 0.43788 27 2 0.72881 225 5 0.78774 61 2 0.72143 22 2 0.72611 102 5 0.60305 234 5 0.572109 190 5 0.65790 171 5 0.535016 76 5 0.634199 69 5 0.733014 101 5 0.800000 5 0 0.70824 42 5 0.812101 157 5 0.73233 93 5 0.84516 129 5 0.74786 116 5 0.81265 78 5 0.77462 106 5 0.79849 0.69408 0.56349 0.78280 0.81000 0.77137 0.80423 0.77485 0.72951 0.65516 0.83389 0.87396 0.757732 0.82313 0.80858 0.65212 0.90268 0.78629 0.776617 0.81228 0.54503 0.71368 0.83067 0.70899 0.69553 0.78866 0.70786 0.66986 0.79537 0.77797 0.750788 0.77321 0.698869 0.634222 0.705172 0.92063492 0.660317 0.795376 0.84428 0.83867 0.77760 0.84702 0.81198 0 0.75974 0.75838 0.0126516 5 0.53085 0.62516 -0.09431370 0.359202 0.9130716 insignificant 1 1.00000 insignificant 0.44412 0.8703726 insignificant 1 1.00000 insignificant 0.06656966 0.165342 lowCoverage 1 lowCoverage 0.76202 0.726667 0.037711 5 0.68252 0.692176 -0.0096537 1.0440e-01 8.4908e-01 insignificant 9.4053e-01 1.0000e+00 insignificant 3.3961e-01 7.8439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0054147 9.1842e-01 lowCoverage 1.0000e+00 lowCoverage 0.76282 0.79310 -0.0453602 5 0.70104 0.81508 -0.11404523 9.6342e-01 0.0677840 insignificant 1.0000e+00 1 insignificant 9.6410e-01 0.19887584 insignificant 1.0000e+00 1.00000 insignificant -0.0841766 0.0276742 lowCoverage 1.00000 lowCoverage 0.75993 0.726667 0.024226 5 0.66093 0.692176 -0.03125042 1.9076e-01 5.4683e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0865e-01 6.0514e-01 insignificant 1.0000e+00 1.000e+00 insignificant -0.0719843 2.2611e-01 lowCoverage 1.0000e+00 lowCoverage 0.76261 0.79310 -0.0589731 5 0.70858 0.81508 -0.1065033 9.4505e-01 0.00073157 weaklyHypometh 1.0000e+00 0.59172 insignificant 9.9650e-01 0.020159 weaklyHypometh 1.0000e+00 1 insignificant -0.15074629 0.0027589 lowCoverage 0.34486 lowCoverage 0.729306 0.79310 -0.0822398 5 0.751983 0.81508 -0.0631000 9.9770e-01 3.7502e-02 weaklyHypometh 1.0000e+00 4.6770e-01 insignificant 9.9360e-01 2.3821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.078762 1.4155e-01 lowCoverage 1.00000000 lowCoverage chr11 4395591 4396591 105216 TRIM21 ENSG00000132109 0.72186 106 4 0.90991 214 5 0.87854 229 5 0.95256 84 4 0.89620 186 5 0.77689 160 4 0.91378 240 5 0.92961 166 5 0.88272 222 5 0.95207 163 5 0.86909 203 5 0.89078 170 5 0.916292 217 5 0.95000 17 2 0.98397 188 5 0.89529 100 5 0.84918 169 5 0.87288 90 2 0.906318 182 5 0.92922 150 4 0.84181 70 5 0.96774 41 2 0.98327 142 5 1.00000 40 4 0.84286 23 1 0.96462 176 5 0.84091 72 5 0.96667 58 5 0.95144 192 4 0.94369 206 5 0.958235 174 5 0.87684 164 5 0.684962 206 5 0.533643 111 4 0.349312 186 5 0.333333 8 1 0.76718 145 5 0.770577 203 5 0.97931 139 4 0.94791 110 4 0.96237 111 2 0.96935 93 2 0.92529 94 2 0.89589 0.85752 0.77514 0.89367 0.85015 0.92348 0.82076 0.89269 0.83821 0.93676 0.82194 0.83690 0.921458 0.93887 0.98485 0.91252 0.70865 0.84647 0.884072 0.88821 0.69701 0.95955 0.95822 1.00000 0.82213 0.94265 0.87849 1.00000 0.90262 0.89725 0.889850 0.88534 0.569756 0.477058 0.111824 0.31763501 0.745267 0.573847 0.93915 0.94552 0.91145 0.94494 0.91113 2 0.91214 0.93225 -0.0254252 5 0.90949 0.93792 -0.02843296 0.994848 0.0474431 weaklyHypometh 1 1.00000 insignificant 0.99956 0.0046093 weaklyHypometh 1 0.65848 insignificant -0.03431388 0.129919 lowCoverage 1 lowCoverage 0.91186 0.684517 0.229415 5 0.75791 0.528413 0.2294935 7.1933e-18 1.0000e+00 hypermethylated 4.2314e-16 1.0000e+00 hypermethylated 1.3728e-09 1.0000e+00 hypermethylated 1.9611e-07 1.0000e+00 hypermethylated 0.3206916 1.0364e-02 lowCoverage 2.1152e-01 lowCoverage 0.91186 0.90311 -0.0402023 2 0.75791 0.96266 -0.20475374 9.9486e-01 0.0280717 lowCoverage 1.0000e+00 1 lowCoverage 9.9998e-01 0.00349502 lowCoverage 1.0000e+00 0.87375 lowCoverage -0.0629843 0.0010436 lowCoverage 0.13045 lowCoverage 0.93225 0.685315 0.264877 5 0.93792 0.634095 0.30382514 1.5581e-13 1.0000e+00 hypermethylated 8.2003e-12 1.0000e+00 hypermethylated 8.8275e-09 1.0000e+00 hypermethylated 1.7655e-06 1.000e+00 hypermethylated 0.3550055 6.5204e-03 lowCoverage 1.5398e-01 lowCoverage 0.93225 0.90293 -0.0051680 2 0.93792 0.95519 -0.0172715 8.3178e-01 0.35670274 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.8044e-01 0.215914 lowCoverage 1.0000e+00 1 lowCoverage -0.02867041 0.1650807 lowCoverage 1.00000 lowCoverage 0.684517 0.90311 -0.3483842 2 0.528413 0.96266 -0.4342472 1.0000e+00 2.1701e-05 lowCoverage 1.0000e+00 8.6805e-04 lowCoverage 1.0000e+00 1.7270e-05 lowCoverage 1.0000e+00 2.4672e-03 lowCoverage -0.383676 5.0449e-03 lowCoverage 0.18684759 lowCoverage chr11 4396159 4397159 105217 TRIM21 ENSG00000132109 0.72186 106 4 0.90991 214 5 0.87854 229 5 0.95256 84 4 0.89620 186 5 0.77689 160 4 0.91378 240 5 0.92961 166 5 0.88272 222 5 0.95207 163 5 0.86909 203 5 0.89078 170 5 0.916292 217 5 0.95000 17 2 0.98397 188 5 0.89529 100 5 0.84918 169 5 0.87288 90 2 0.906318 182 5 0.92922 150 4 0.84181 70 5 0.96774 41 2 0.98327 142 5 1.00000 40 4 0.84286 23 1 0.96462 176 5 0.84091 72 5 0.96667 58 5 0.95144 192 4 0.94369 206 5 0.958235 174 5 0.87684 164 5 0.684962 206 5 0.533643 111 4 0.349312 186 5 0.333333 8 1 0.76718 145 5 0.770577 203 5 0.97931 139 4 0.94791 110 4 0.96237 111 2 0.96935 93 2 0.92529 94 2 0.89589 0.85752 0.77514 0.89367 0.85015 0.92348 0.82076 0.89269 0.83821 0.93676 0.82194 0.83690 0.921458 0.93887 0.98485 0.91252 0.70865 0.84647 0.884072 0.88821 0.69701 0.95955 0.95822 1.00000 0.82213 0.94265 0.87849 1.00000 0.90262 0.89725 0.889850 0.88534 0.569756 0.477058 0.111824 0.31763501 0.745267 0.573847 0.93915 0.94552 0.91145 0.94494 0.91113 2 0.91214 0.93225 -0.0254252 5 0.90949 0.93792 -0.02843296 0.994848 0.0474431 weaklyHypometh 1 1.00000 insignificant 0.99956 0.0046093 weaklyHypometh 1 0.65848 insignificant -0.03431388 0.129919 lowCoverage 1 lowCoverage 0.91186 0.684517 0.229415 5 0.75791 0.528413 0.2294935 7.1933e-18 1.0000e+00 hypermethylated 4.2314e-16 1.0000e+00 hypermethylated 1.3728e-09 1.0000e+00 hypermethylated 1.9611e-07 1.0000e+00 hypermethylated 0.3206916 1.0364e-02 lowCoverage 2.1152e-01 lowCoverage 0.91186 0.90311 -0.0402023 2 0.75791 0.96266 -0.20475374 9.9486e-01 0.0280717 lowCoverage 1.0000e+00 1 lowCoverage 9.9998e-01 0.00349502 lowCoverage 1.0000e+00 0.87375 lowCoverage -0.0629843 0.0010436 lowCoverage 0.13045 lowCoverage 0.93225 0.685315 0.264877 5 0.93792 0.634095 0.30382514 1.5581e-13 1.0000e+00 hypermethylated 8.2003e-12 1.0000e+00 hypermethylated 8.8275e-09 1.0000e+00 hypermethylated 1.7655e-06 1.000e+00 hypermethylated 0.3550055 6.5204e-03 lowCoverage 1.5398e-01 lowCoverage 0.93225 0.90293 -0.0051680 2 0.93792 0.95519 -0.0172715 8.3178e-01 0.35670274 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.8044e-01 0.215914 lowCoverage 1.0000e+00 1 lowCoverage -0.02867041 0.1650807 lowCoverage 1.00000 lowCoverage 0.684517 0.90311 -0.3483842 2 0.528413 0.96266 -0.4342472 1.0000e+00 2.1701e-05 lowCoverage 1.0000e+00 8.6805e-04 lowCoverage 1.0000e+00 1.7270e-05 lowCoverage 1.0000e+00 2.4672e-03 lowCoverage -0.383676 5.0449e-03 lowCoverage 0.18684759 lowCoverage chr11 8292648 8293648 105348 LMO1 ENSG00000166407 0.90714 192 5 0.74257 180 5 0.69723 150 5 0.99238 134 3 0.94884 134 5 0.88393 285 5 0.93954 234 5 0.89167 178 5 0.93270 177 5 0.86900 85 4 0.87249 241 5 0.88414 110 4 0.958413 164 4 0.93929 35 3 0.92583 147 5 0.91179 84 4 0.80487 90 4 0.74023 85 3 0.936707 155 4 0.90070 273 5 0.92699 75 5 0.66667 6 1 0.94067 108 5 0.92076 87 4 1.00000 5 0 0.93311 202 5 0.90021 81 4 0.95761 49 4 0.97273 157 4 0.90130 188 5 0.937922 182 5 0.94150 272 5 0.416414 188 5 0.388656 146 4 0.021060 241 3 0.375000 6 0 0.48437 135 5 0.809548 213 5 0.88719 273 4 0.93631 264 5 0.84577 107 3 0.98529 61 1 0.87323 203 3 0.91604 0.83699 0.74218 0.97823 0.95530 0.91991 0.93361 0.91688 0.88504 0.90485 0.91709 0.81487 0.982396 0.90921 0.93510 0.89801 0.80867 0.81147 0.953588 0.92222 0.88041 NA 0.87411 0.93035 NA 0.88149 0.90037 0.94561 0.92208 0.93563 0.941096 0.92388 0.257431 0.253667 0.041211 0.21404899 0.343515 0.790421 0.90964 0.92762 0.87376 0.96468 0.91121 2 0.90288 0.92558 -0.0218411 5 0.78105 0.95068 -0.16963253 0.999508 0.0880704 insignificant 1 1.00000 insignificant 0.99859 0.1209112 insignificant 1 1.00000 insignificant -0.03264995 0.286356 lowCoverage 1 lowCoverage 0.90316 0.361381 0.539803 5 0.91122 0.411884 0.4993405 5.3728e-23 1.0000e+00 hypermethylated 5.9697e-21 1.0000e+00 hypermethylated 2.5423e-09 1.0000e+00 hypermethylated 3.1778e-07 1.0000e+00 hypermethylated 0.4681308 5.6660e-03 lowCoverage 1.3578e-01 lowCoverage 0.90316 0.91410 -0.0095190 3 0.91122 0.85938 0.05184599 6.1578e-01 0.6346981 lowCoverage 1.0000e+00 1 lowCoverage 9.8508e-01 0.23368852 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0215851 0.4964916 lowCoverage 1.00000 lowCoverage 0.92558 0.361679 0.541115 5 0.95068 0.424472 0.52621014 1.1495e-14 1.0000e+00 hypermethylated 9.0605e-13 1.0000e+00 hypermethylated 2.2841e-08 1.0000e+00 hypermethylated 3.2630e-06 1.000e+00 hypermethylated 0.5007808 3.9263e-03 lowCoverage 1.0067e-01 lowCoverage 0.92553 0.91410 0.0059202 3 0.94246 0.85938 0.0830839 1.2329e-01 0.96396319 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.7745e-01 0.714912 lowCoverage 1.0000e+00 1 lowCoverage 0.01106487 0.7546636 lowCoverage 1.00000 lowCoverage 0.361381 0.91410 -0.5970009 3 0.411884 0.85938 -0.4474946 9.9999e-01 2.9983e-07 lowCoverage 1.0000e+00 2.1416e-05 lowCoverage 1.0000e+00 4.3495e-06 lowCoverage 1.0000e+00 1.4498e-03 lowCoverage -0.489716 4.3460e-03 lowCoverage 0.18684759 lowCoverage chr11 8346206 8347206 105357 LMO1 ENSG00000166407 0.84458 740 10 0.76269 393 10 0.89490 173 9 0.81017 691 10 0.88703 165 6 0.92550 794 10 0.75625 275 10 0.78263 202 10 0.81742 196 9 0.96717 91 5 0.80767 418 10 0.95667 80 7 0.847906 121 9 0.88998 92 9 0.90219 122 9 0.89878 134 5 0.71667 19 2 0.70764 786 9 0.711919 228 8 0.75668 562 10 0.92464 135 8 0.77814 97 4 0.91190 203 10 0.81815 162 9 0.84398 383 8 0.92509 347 10 0.80184 141 8 0.88214 120 8 0.89279 257 9 0.83757 358 10 0.882760 385 9 0.84784 577 10 0.303880 298 10 0.321508 249 9 0.352953 269 8 0.414296 327 8 0.35356 391 10 0.201486 547 10 0.74264 623 8 0.84279 461 9 0.94306 657 8 0.81273 422 7 0.81139 524 9 0.82322 0.84891 0.91765 0.85684 0.86332 0.92728 0.82531 0.81511 0.79635 0.92570 0.82572 0.94026 0.839797 0.86423 0.91407 0.81948 0.69326 0.81219 0.809648 0.77167 0.92641 0.84551 0.91981 0.73522 0.88729 0.92937 0.78914 0.76600 0.92254 0.89688 0.886530 0.83484 0.295893 0.221800 0.336536 0.30223634 0.314539 0.163506 0.73330 0.82396 0.91986 0.78805 0.81965 3 0.84528 0.88401 -0.0355514 10 0.75897 0.88400 -0.12503639 0.955505 0.0158897 weaklyHypometh 1 1.00000 insignificant 0.95621 0.0439746 weaklyHypometh 1 1.00000 insignificant -0.03001640 0.201014 insignificant 1 insignificant 0.84542 0.282692 0.563286 10 0.75897 0.257461 0.5015054 3.9324e-74 1.0000e+00 hypermethylated 3.9324e-71 1.0000e+00 hypermethylated 4.5585e-20 1.0000e+00 hypermethylated 2.2793e-17 1.0000e+00 hypermethylated 0.5076076 8.5984e-08 hypermethylated 1.2283e-05 hypermethylated 0.84555 0.84146 0.0166271 9 0.83486 0.81062 0.02424442 8.7166e-04 0.9421935 weaklyHypermeth 3.2284e-02 1 weaklyHypermeth 1.7690e-02 0.99523350 weaklyHypermeth 6.5517e-01 1.00000 insignificant 0.0017000 0.9649775 insignificant 1.00000 insignificant 0.88369 0.283173 0.602081 10 0.79309 0.348370 0.44472364 3.2912e-54 1.0000e+00 hypermethylated 1.6456e-51 1.0000e+00 hypermethylated 5.3357e-19 1.0000e+00 hypermethylated 2.6678e-16 1.000e+00 hypermethylated 0.5376240 3.7869e-07 hypermethylated 4.2077e-05 hypermethylated 0.88397 0.84146 0.0587249 9 0.87240 0.81062 0.0617844 8.3090e-05 0.99897876 weaklyHypermeth 5.5393e-03 1.00000 weaklyHypermeth 2.4553e-04 0.999905 weaklyHypermeth 2.2321e-02 1 weaklyHypermeth 0.03171642 0.4081716 insignificant 1.00000 insignificant 0.282828 0.84146 -0.5343337 9 0.283207 0.81062 -0.5274116 1.0000e+00 2.3803e-30 hypomethylated 1.0000e+00 7.9343e-28 hypomethylated 1.0000e+00 1.0458e-11 hypomethylated 1.0000e+00 8.5805e-09 hypomethylated -0.505908 1.5877e-06 hypomethylated 0.00052924 hypomethylated chr11 8686888 8687888 105386 SNORA45 ENSG00000212607 0.70091 206 6 0.69502 186 6 0.76434 149 6 0.72509 89 6 0.75446 84 6 0.79902 260 6 0.69365 95 6 0.77757 121 6 0.73628 92 6 0.82389 102 6 0.78735 241 6 0.82517 75 6 0.714489 112 6 0.79365 32 3 0.82267 99 6 0.74484 54 6 0.85046 142 5 0.68651 105 5 0.794510 109 5 0.67019 230 6 0.76372 99 6 0.71462 42 5 0.77796 122 6 0.90653 100 6 0.75417 54 5 0.76484 204 6 0.72283 109 6 0.81751 59 6 0.70145 102 6 0.71183 183 6 0.714113 213 6 0.75304 278 6 0.553776 165 6 0.643333 94 5 0.598273 155 5 0.728485 42 4 0.66467 114 6 0.669233 164 6 0.72132 165 5 0.86347 167 5 0.83760 100 5 0.75722 171 5 0.74971 133 5 0.76324 0.74072 0.80335 0.78368 0.77054 0.81989 0.73791 0.79602 0.77917 0.84379 0.81341 0.81070 0.790291 0.82748 0.87265 0.78094 0.85372 0.77451 0.798949 0.76188 0.80267 0.79422 0.79360 0.90999 0.79850 0.78902 0.75822 0.87899 0.78424 0.76581 0.786576 0.76530 0.624657 0.757005 0.720955 0.75099411 0.777778 0.724142 0.78474 0.86345 0.85114 0.80747 0.83630 5 0.79520 0.78147 0.0133548 6 0.76245 0.74393 0.01851167 0.118059 0.6281786 insignificant 1 1.00000 insignificant 0.48683 0.4282946 insignificant 1 1.00000 insignificant -0.00054602 0.979012 insignificant 1 insignificant 0.79520 0.671662 0.114882 6 0.76245 0.615856 0.1465898 2.7039e-08 9.9286e-01 weaklyHypermeth 6.2882e-07 1.0000e+00 weaklyHypermeth 2.2964e-03 9.4519e-01 weaklyHypermeth 4.7842e-02 1.0000e+00 weaklyHypermeth 0.1150430 3.5460e-03 weaklyHypermeth 9.5838e-02 weaklyHypermeth 0.79520 0.84103 -0.0273583 5 0.76245 0.78415 -0.02170072 7.8223e-01 0.0150412 weaklyHypometh 1.0000e+00 1 insignificant 8.9935e-01 0.01797032 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0278596 0.3896373 insignificant 1.00000 insignificant 0.78147 0.671662 0.108225 6 0.74393 0.615856 0.12807814 7.2834e-05 9.9886e-01 weaklyHypermeth 1.3006e-03 1.0000e+00 weaklyHypermeth 2.5649e-03 9.6811e-01 weaklyHypermeth 5.0292e-02 1.000e+00 weaklyHypermeth 0.1155890 3.3213e-03 weaklyHypermeth 8.9764e-02 weaklyHypermeth 0.78147 0.84103 -0.0373496 5 0.74393 0.78415 -0.0402124 7.9259e-01 0.00979807 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.6378e-01 0.103604 insignificant 1.0000e+00 1 insignificant -0.02731362 0.4215201 insignificant 1.00000 insignificant 0.671662 0.84103 -0.0938090 5 0.615856 0.78415 -0.1682905 9.8214e-01 2.7715e-05 weaklyHypometh 1.0000e+00 1.0659e-03 weaklyHypometh 9.5638e-01 1.4501e-03 weaklyHypometh 1.0000e+00 7.0397e-02 weaklyHypometh -0.142903 4.1208e-03 weaklyHypometh 0.18684759 insignificant chr11 9460505 9461505 105422 ZNF143 ENSG00000166478 0.88088 148 5 0.87833 69 2 0.66944 38 5 0.90022 115 5 0.85000 39 4 0.90582 120 5 0.93723 50 2 0.72348 41 2 0.85000 21 1 0.71667 21 1 0.83167 114 5 0.83333 12 2 0.976471 34 2 0.96000 43 2 0.87273 28 2 0.45833 34 2 1.00000 1 0 0.79276 210 4 0.865079 78 2 0.92000 73 2 0.90000 17 2 1.00000 7 0 0.94940 62 2 0.52183 21 1 0.94462 58 4 0.90955 93 5 0.88571 35 2 0.58333 5 0 0.91889 92 2 0.66020 99 5 0.860087 119 5 0.88322 125 5 0.843907 76 2 0.829861 59 2 0.835027 105 5 0.750000 7 0 0.76623 51 2 0.950000 103 5 0.85416 125 5 0.90822 138 5 0.84667 114 5 0.85029 122 2 0.90063 102 5 0.70221 0.69583 0.61111 0.75054 0.62500 0.82011 0.84308 0.72348 0.62500 0.31667 0.73943 0.83333 0.941176 0.90000 0.68182 0.91667 0.93435 0.78190 0.845238 0.80000 0.75000 1.00000 0.87351 0.35714 0.96154 0.77032 0.71429 0.58333 0.79721 0.81071 0.793076 0.81217 0.609767 0.906250 0.587567 0.40907071 0.665570 0.875000 0.76039 0.83721 0.78333 0.85029 0.88571 0 0.82545 0.82514 -0.0053645 2 0.71941 0.72230 -0.00289173 0.904985 0.8011957 lowCoverage 1 1.00000 lowCoverage 0.68912 0.9309362 lowCoverage 1 1.00000 lowCoverage 0.00638577 0.905052 lowCoverage 1 lowCoverage 0.82609 0.768080 0.049170 2 0.83931 0.886444 -0.0471320 2.7682e-01 5.3157e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0999e-01 7.7502e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0119522 7.6972e-01 lowCoverage 1.0000e+00 lowCoverage 0.82609 0.85358 -0.0262576 2 0.83931 0.89500 -0.05568717 7.3651e-01 0.3680039 lowCoverage 1.0000e+00 1 lowCoverage 6.3333e-02 0.59457950 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0308702 0.3270119 lowCoverage 1.00000 lowCoverage 0.82627 0.768080 0.043507 2 0.84269 0.886444 -0.04375832 2.6852e-01 1.7519e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3678e-01 5.6094e-01 lowCoverage 1.0000e+00 1.000e+00 lowCoverage 0.0055664 9.1834e-01 lowCoverage 1.0000e+00 lowCoverage 0.82627 0.85358 -0.0155603 5 0.84269 0.89500 -0.0523135 4.6756e-01 0.36133902 insignificant 1.0000e+00 1.00000 insignificant 2.5289e-01 0.346594 insignificant 1.0000e+00 1 insignificant -0.03725600 0.4413647 lowCoverage 1.00000 lowCoverage 0.768080 0.85358 -0.0745197 2 0.886444 0.89500 -0.0085552 1.7676e-01 4.1662e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0187e-01 7.6111e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.042822 2.2089e-01 lowCoverage 1.00000000 lowCoverage chr11 9525340 9526340 105423 ZNF143 ENSG00000166478 0.73670 148 5 0.80909 221 5 0.65958 165 3 0.85209 172 5 0.64819 124 5 0.86003 408 5 0.70834 106 5 0.72075 191 5 0.82905 76 3 0.88947 110 3 0.72350 290 5 0.44545 60 2 0.835758 117 5 0.90596 93 5 0.76833 118 5 0.55543 74 3 0.77895 26 1 0.59433 97 5 0.854275 161 5 0.84705 350 5 0.75000 30 3 0.92720 47 2 0.99412 92 3 0.69940 82 3 0.82639 49 2 0.73788 248 5 0.75675 61 3 0.85185 37 2 0.77190 145 5 0.64059 234 5 0.835942 284 5 0.88091 289 5 0.843681 162 5 0.708882 97 5 0.797738 150 5 0.900000 20 1 0.61428 99 5 0.646769 217 5 0.66069 135 5 0.79747 144 5 0.75401 154 5 1.00000 40 2 0.80677 135 5 0.87507 0.88082 0.93257 0.97528 0.84955 0.95686 0.88561 0.92162 0.90204 0.94928 0.94192 0.77210 0.943846 0.96924 0.89236 0.90730 0.91410 0.95722 0.928953 0.94603 0.98849 0.93519 0.99284 0.96880 0.90170 0.94596 0.88821 0.88025 0.91975 0.91556 0.913033 0.92813 0.953692 0.890667 0.978231 0.98445596 0.912943 0.971153 0.92729 0.94438 0.94006 0.98167 0.96898 2 0.90344 0.90300 0.0008608 5 0.61576 0.65984 -0.04407814 0.734525 0.6175161 insignificant 1 1.00000 insignificant 0.96646 0.2875870 insignificant 1 1.00000 insignificant -0.05496206 0.176555 lowCoverage 1 lowCoverage 0.90344 0.885906 -0.012454 5 0.61576 0.619364 -0.0036052 8.2054e-01 5.5317e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8972e-01 4.9179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0007756 9.8880e-01 lowCoverage 1.0000e+00 lowCoverage 0.90452 0.87829 -0.0067526 5 0.66823 0.65548 0.01275563 7.8725e-01 0.6315404 insignificant 1.0000e+00 1 insignificant 8.8428e-01 0.36647471 insignificant 1.0000e+00 1.00000 insignificant -0.0526712 0.4261563 lowCoverage 1.00000 lowCoverage 0.90300 0.885906 -0.014527 5 0.65984 0.619364 0.04047293 9.0309e-01 7.0384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6741e-01 8.6233e-01 insignificant 1.0000e+00 1.000e+00 insignificant 0.0541865 3.4612e-01 lowCoverage 1.0000e+00 lowCoverage 0.90345 0.87829 -0.0087088 5 0.71312 0.65548 0.0576376 5.6191e-01 0.45511807 insignificant 1.0000e+00 1.00000 insignificant 5.9680e-01 0.665839 insignificant 1.0000e+00 1 insignificant 0.00229084 0.9718856 lowCoverage 1.00000 lowCoverage 0.886945 0.87829 0.0054060 5 0.659151 0.65548 0.0036737 7.6060e-01 9.1545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9686e-01 9.5518e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.051896 4.9226e-01 lowCoverage 1.00000000 lowCoverage chr11 11650494 11651494 105540 GALNTL4 ENSG00000110328 0.88885 106 5 0.92000 59 5 0.82667 41 5 0.95000 30 5 0.87111 32 5 0.90908 115 5 0.81333 22 4 0.78017 77 5 0.78429 34 5 0.90476 32 5 0.88490 139 5 0.72000 23 4 0.949318 91 5 NA 0 0 0.93333 31 5 0.94286 28 4 0.57667 22 3 0.91429 35 5 0.819363 52 5 0.93419 107 5 0.92092 76 5 0.94643 35 5 0.85714 34 5 1.00000 9 0 0.93333 16 0 0.89737 92 5 0.94286 40 5 0.84167 18 1 0.93810 54 5 0.93462 67 5 0.957609 96 5 0.96226 157 5 0.736134 73 5 0.536422 57 5 0.769231 26 1 0.733333 14 0 0.78571 26 2 0.774603 90 5 0.96071 63 5 0.93785 130 5 0.95000 38 5 0.91310 38 5 0.98667 64 4 0.89678 0.92500 0.82901 0.96181 0.89043 0.92190 0.80278 0.78324 0.79752 0.89881 0.88126 0.76389 0.945944 NA 0.94907 0.93849 0.59051 0.91865 0.813585 0.93493 0.92919 0.95040 0.84722 1.00000 0.94907 0.90351 0.95635 0.84201 0.94253 0.94578 0.962787 0.96170 0.728992 0.517640 NA 0.71296296 0.778770 0.765708 0.96602 0.93526 0.94618 0.91873 0.98611 0 0.87918 0.93660 -0.0554165 5 0.87985 0.93449 -0.05464389 0.999814 0.0016031 weaklyHypometh 1 0.32061 insignificant 0.99986 0.0036017 weaklyHypometh 1 0.65848 insignificant -0.06857694 0.011476 lowCoverage 1 lowCoverage 0.87918 0.706294 0.176311 5 0.87985 0.697616 0.1822341 1.6070e-10 9.9664e-01 weaklyHypermeth 4.5915e-09 1.0000e+00 weaklyHypermeth 3.4068e-05 9.1518e-01 weaklyHypermeth 1.2087e-03 1.0000e+00 weaklyHypermeth 0.1365411 1.3498e-02 lowCoverage 2.4543e-01 lowCoverage 0.87918 0.95195 -0.0736302 5 0.87985 0.95202 -0.07216451 9.9622e-01 0.0053168 weaklyHypometh 1.0000e+00 1 insignificant 9.9510e-01 0.00823993 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0905504 0.0015559 lowCoverage 0.17288 lowCoverage 0.93660 0.706294 0.232299 5 0.93449 0.697616 0.23687803 5.9036e-14 9.9995e-01 hypermethylated 3.4727e-12 1.0000e+00 hypermethylated 1.8674e-06 9.9061e-01 hypermethylated 1.1671e-04 1.000e+00 hypermethylated 0.2051180 2.0941e-03 lowCoverage 6.3761e-02 lowCoverage 0.93660 0.95195 -0.0158945 5 0.93449 0.95202 -0.0175206 5.5853e-01 0.18206107 insignificant 1.0000e+00 1.00000 insignificant 4.8765e-01 0.305554 insignificant 1.0000e+00 1 insignificant -0.02197348 0.2359590 lowCoverage 1.00000 lowCoverage 0.706294 0.95195 -0.2529667 5 0.697616 0.95202 -0.2543987 1.0000e+00 1.6752e-08 hypomethylated 1.0000e+00 2.0940e-06 hypomethylated 9.9998e-01 3.0288e-05 hypomethylated 1.0000e+00 3.7861e-03 hypomethylated -0.227091 1.3129e-03 lowCoverage 0.09377559 lowCoverage chr11 15537915 15538915 105797 INSC ENSG00000188487 0.99346 72 3 0.95652 96 5 0.95556 35 5 0.89712 80 5 0.97778 26 1 0.96790 112 3 0.97500 41 5 0.92146 41 3 0.98000 18 1 0.92000 14 1 0.94138 126 5 0.90000 18 0 1.000000 17 3 0.80000 18 2 0.95000 20 2 1.00000 2 0 NA 0 0 0.73810 47 1 0.989474 41 3 0.92112 78 3 0.98182 31 3 0.90632 41 3 0.93333 44 3 0.95556 36 3 0.91599 137 5 0.97918 95 5 1.00000 40 3 1.00000 7 0 0.95652 48 3 0.92279 142 5 0.950000 114 5 0.98537 77 3 0.651429 73 5 0.457398 84 3 0.886667 219 3 0.643122 166 5 0.60325 83 5 0.710836 135 5 0.92074 92 3 0.97182 93 5 0.86246 82 5 0.94444 69 1 0.92585 92 5 0.99440 0.93789 0.93651 0.89069 0.96825 0.95074 0.96429 0.92077 0.97143 0.88571 0.92798 1.00000 1.000000 0.71429 0.92857 NA NA 0.98639 0.984962 0.92309 0.97403 0.91153 0.89286 0.96190 0.96162 0.96716 1.00000 1.00000 0.92547 0.92006 0.920918 0.97909 0.685714 0.540871 0.878571 0.81594860 0.661783 0.855816 0.86772 0.95134 0.96678 0.91807 0.98251 0 0.93126 0.93227 0.0119445 3 0.79445 0.95904 -0.16459349 0.667795 0.5151053 lowCoverage 1 1.00000 lowCoverage 0.68749 0.7328492 lowCoverage 1 1.00000 lowCoverage -0.02119440 0.253465 lowCoverage 1 lowCoverage 0.93230 0.734211 0.219206 3 0.95334 0.647086 0.3062548 8.2233e-22 1.0000e+00 lowCoverage 8.2233e-20 1.0000e+00 lowCoverage 3.9715e-12 1.0000e+00 lowCoverage 1.3238e-09 1.0000e+00 lowCoverage 0.2772624 3.8322e-03 lowCoverage 1.0085e-01 lowCoverage 0.93230 0.90888 0.0188923 3 0.95334 0.91452 0.03882416 7.4396e-02 0.9831942 lowCoverage 1.0000e+00 1 lowCoverage 1.7495e-01 0.97418074 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0109828 0.6537531 lowCoverage 1.00000 lowCoverage 0.93218 0.734211 0.208310 3 0.95085 0.647086 0.30376695 5.0885e-17 1.0000e+00 lowCoverage 4.6259e-15 1.0000e+00 lowCoverage 1.0204e-10 1.0000e+00 lowCoverage 3.4014e-08 1.000e+00 lowCoverage 0.2984568 3.1364e-03 lowCoverage 8.7123e-02 lowCoverage 0.93218 0.90888 0.0093734 3 0.95085 0.91452 0.0363363 6.8977e-02 0.92315536 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.6324e-01 0.891643 lowCoverage 1.0000e+00 1 lowCoverage 0.03217715 0.1622047 lowCoverage 1.00000 lowCoverage 0.734211 0.90888 -0.2049414 5 0.647086 0.91452 -0.2674306 9.9999e-01 7.1092e-07 hypomethylated 1.0000e+00 4.7394e-05 hypomethylated 1.0000e+00 6.0165e-05 hypomethylated 1.0000e+00 5.4811e-03 hypomethylated -0.266280 4.4799e-03 lowCoverage 0.18684759 lowCoverage chr11 17583519 17584519 106089 OTOG ENSG00000188162 0.948627 281 6 0.931927 191 8 0.909765 176 8 0.917445 254 8 0.80115 150 8 0.921431 222 8 0.941781 276 8 0.921798 202 8 0.880586 202 8 0.834925 264 8 0.921738 233 8 0.842549 148 8 0.940469 288 8 0.98214 27 2 0.893981 226 8 0.81177 139 6 0.812821 184 8 0.791811 292 8 0.917626 180 8 0.823958 220 8 0.748424 81 8 0.93586 100 8 0.936816 142 8 0.834877 89 8 0.984375 64 8 0.935258 238 8 0.780730 128 8 0.974074 114 8 0.9248698 289 8 0.953949 307 8 0.920421 224 8 0.968513 257 8 0.481285 247 8 0.603955 146 8 1.00000 13 0 0.718205 65 4 0.538693 94 8 0.2508904 248 8 0.916175 286 6 0.814246 191 8 0.9368948 217 8 0.890289 227 8 0.816036 216 8 0.930234 0.928212 0.90297 0.910556 0.891895 0.904621 0.938224 0.914230 0.881677 0.9391070 0.913538 0.846554 0.930047 0.98367 0.892466 0.8960856 0.829573 0.881832 0.918007 0.920259 0.851110 0.92882 0.927389 0.93660 0.985714 0.926265 0.886661 0.969101 0.9197057 0.952079 0.912054 0.959385 0.41063 0.527425 0.62548 0.641331 0.551418 0.225660 0.909214 0.914464 0.938634 0.883357 0.922126 8 0.911673 0.936055 -0.0241019 8 0.837538 0.86887 -0.0313279 0.999834 0.0095902 weaklyHypometh 1 1 insignificant 0.999957 0.010300 weaklyHypometh 1 1 insignificant -0.0207659 0.43069 insignificant 1 insignificant 0.911673 0.501845 0.409044 8 0.837538 0.429850 0.407688 7.7374e-54 0.99999 hypermethylated 7.7374e-51 1 hypermethylated 3.6243e-07 0.99832 hypermethylated 6.0405e-05 1 hypermethylated 0.288577 0.03670499 weaklyHypermeth 1.000000 insignificant 0.911673 0.915567 -0.0052128 8 0.837538 0.815300 0.0222385 7.0969e-01 0.402385 insignificant 1.0000e+00 1 insignificant 3.7011e-01 0.623075 insignificant 1.0000e+00 1 insignificant 0.012687 0.6712700 insignificant 1.00000 insignificant 0.936055 0.501845 0.433699 8 0.868866 0.429850 0.439016 1.3962e-36 1.00000 hypermethylated 6.9811e-34 1 hypermethylated 2.3103e-07 1.00000 hypermethylated 4.6205e-05 1 hypermethylated 0.309343 0.02833240 weaklyHypermeth 1.000000 insignificant 0.936055 0.915567 0.020013 8 0.86887 0.815300 0.0535664 9.2501e-02 0.98329859 insignificant 1.0000e+00 1.00000 insignificant 2.1782e-02 0.998038 weaklyHypermeth 1.0000e+00 1 insignificant 0.033453 0.3453974 insignificant 1.00000 insignificant 0.501845 0.915567 -0.4136341 8 0.429850 0.815300 -0.3854494 0.99999755 8.0110e-18 hypomethylated 1.000000 8.0110e-15 hypomethylated 0.98492 0.00432999 weaklyHypometh 1 0.227894 insignificant -0.275890 0.0422583 weaklyHypometh 1.00000 insignificant chr11 17616125 17617125 106097 OTOG ENSG00000188162 0.837706 151 5 0.825739 106 7 0.807009 38 3 0.816993 140 5 0.80976 27 2 0.860934 183 5 0.833333 24 3 0.886220 96 5 0.540404 30 3 0.842857 18 1 0.842079 168 7 0.870000 22 2 0.837566 69 5 0.73333 22 2 0.905303 29 3 0.88889 7 0 1.000000 4 0 0.905709 143 5 0.772591 92 5 0.847811 133 5 0.984127 46 4 0.86111 18 1 0.870298 80 4 0.779592 33 3 0.927437 101 5 0.911916 114 5 0.887987 55 4 0.740000 14 1 0.8558688 69 5 0.881090 102 5 0.660148 95 5 0.916375 171 5 0.665114 83 3 0.490636 92 5 0.50498 150 7 0.942857 11 1 0.489906 72 5 0.7251587 156 5 0.914286 56 5 0.894503 135 7 0.8711630 186 5 0.910000 52 4 0.874185 124 7 0.864960 0.778239 0.83109 0.833444 0.809034 0.910336 0.809756 0.844632 0.792453 0.9584906 0.872503 0.883962 0.857392 0.77044 0.870283 0.9449759 0.943158 0.893971 0.827970 0.847618 0.989518 0.77281 0.820457 0.86397 0.885333 0.904111 0.893592 0.834868 0.8759928 0.849371 0.866771 0.926632 0.74252 0.442291 0.42482 0.841208 0.638684 0.525524 0.951482 0.901460 0.852466 0.923585 0.879562 0 0.836775 0.866370 -0.0263217 5 0.752362 0.87949 -0.1271315 0.859604 0.1397858 insignificant 1 1 insignificant 0.869851 0.222073 insignificant 1 1 insignificant -0.0231171 0.48357 lowCoverage 1 lowCoverage 0.837349 0.606383 0.226022 5 0.848276 0.579459 0.268817 8.6370e-15 0.99988 hypermethylated 7.8518e-13 1 hypermethylated 2.8631e-05 0.99748 hypermethylated 2.6028e-03 1 hypermethylated 0.196770 0.04341292 lowCoverage 1.000000 lowCoverage 0.837349 0.886076 -0.0380862 5 0.848276 0.892862 -0.0445864 9.7055e-01 0.058166 insignificant 1.0000e+00 1 insignificant 9.9388e-01 0.083289 insignificant 1.0000e+00 1 insignificant -0.059615 0.0112087 lowCoverage 0.93406 lowCoverage 0.865922 0.606383 0.260957 5 0.845064 0.579459 0.265605 1.7618e-11 0.99995 hypermethylated 1.4682e-09 1 hypermethylated 2.5521e-04 0.99955 hypermethylated 1.4178e-02 1 hypermethylated 0.219888 0.02904714 lowCoverage 1.000000 lowCoverage 0.865922 0.886076 -0.013240 5 0.84506 0.892862 -0.0477983 8.7397e-01 0.32806064 insignificant 1.0000e+00 1.00000 insignificant 8.5900e-01 0.251216 insignificant 1.0000e+00 1 insignificant -0.036498 0.2034125 lowCoverage 1.00000 lowCoverage 0.606383 0.886076 -0.2540349 5 0.579459 0.892862 -0.3134031 0.99907794 5.5817e-07 hypomethylated 1.000000 6.9771e-05 hypomethylated 0.99611 0.00093841 hypomethylated 1 0.104521 insignificant -0.256386 0.0172786 lowCoverage 0.93496 lowCoverage chr11 17756713 17757713 106115 ENSG00000205289 0.970354 149 3 0.841761 215 4 0.871264 73 3 0.879819 91 3 0.93333 47 3 0.883713 257 5 0.820684 110 4 0.903205 136 5 0.847538 74 3 0.901092 117 5 0.901632 167 5 0.571429 37 3 0.851016 126 5 0.88295 108 5 0.749245 180 5 0.75000 12 2 1.000000 10 0 0.768329 288 5 0.930471 200 3 0.902724 207 4 0.860390 30 3 0.92795 62 5 0.904199 143 5 0.920000 70 2 0.951562 128 5 0.931169 248 5 0.860803 110 3 0.771326 75 3 0.9775542 145 3 0.886253 197 4 0.866027 163 5 0.769934 199 5 0.909615 147 5 0.696032 105 3 0.74826 239 4 0.983740 49 1 0.729568 145 5 0.9304473 169 5 0.880957 164 3 0.984747 152 4 0.9795752 97 3 0.986667 97 3 0.845238 163 3 0.966928 0.861751 0.86422 0.880527 0.935417 0.927083 0.940038 0.950721 0.904060 0.9500000 0.950989 0.656250 0.897656 0.86335 0.907879 0.9746357 0.974636 0.889406 0.915841 0.939964 0.844968 0.91033 0.907623 0.97083 0.993590 0.936500 0.894118 0.971998 0.9869872 0.924119 0.908323 0.931368 0.99038 0.805308 0.93294 0.993902 0.935627 0.955988 0.969120 0.966634 0.979320 0.982500 0.921875 2 0.905769 0.933078 -0.0246548 5 0.922093 0.94164 -0.0195437 0.998700 0.1603771 insignificant 1 1 insignificant 0.924004 0.254302 insignificant 1 1 insignificant -0.0275692 0.33622 lowCoverage 1 lowCoverage 0.905457 0.930832 -0.022194 5 0.874473 0.764394 0.110079 7.7659e-01 0.15870 insignificant 1.0000e+00 1 insignificant 7.1823e-01 0.19798 insignificant 1.0000e+00 1 insignificant 0.025084 0.65765853 lowCoverage 1.000000 lowCoverage 0.905733 0.956909 -0.0444123 3 0.909108 0.915731 -0.0066235 7.7218e-01 0.061256 lowCoverage 1.0000e+00 1 lowCoverage 9.4267e-01 0.018551 lowCoverage 1.0000e+00 1 lowCoverage -0.077409 0.0663311 lowCoverage 1.00000 lowCoverage 0.932441 0.930751 0.002636 5 0.798779 0.692966 0.105813 8.8328e-01 0.75242 insignificant 1.0000e+00 1 insignificant 8.5756e-01 0.83303 insignificant 1.0000e+00 1 insignificant 0.052653 0.35887381 lowCoverage 1.000000 lowCoverage 0.933036 0.956909 -0.017799 3 0.93191 0.915731 0.0161775 6.6714e-01 0.23055734 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.7125e-01 0.099879 lowCoverage 1.0000e+00 1 lowCoverage -0.049839 0.2007464 lowCoverage 1.00000 lowCoverage 0.931845 0.956909 -0.0191199 3 0.808460 0.915731 -0.1072712 0.56899259 7.0023e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.85766 0.37831840 lowCoverage 1 1.000000 lowCoverage -0.102492 0.1167841 lowCoverage 1.00000 lowCoverage chr11 19708193 19709193 106201 NAV2 ENSG00000166833 0.855282 268 4 0.838369 202 4 0.751240 74 4 0.866799 246 4 0.91423 57 4 0.755048 208 5 0.814192 39 3 0.900992 114 4 0.731650 51 3 0.786215 60 4 0.911434 248 6 0.783333 22 1 0.740829 81 4 0.90417 42 3 0.860131 94 4 0.62121 28 2 0.581818 16 2 0.861239 387 4 0.802545 223 5 0.902672 184 5 0.732967 69 4 0.75204 54 3 0.814210 124 4 0.606288 57 4 0.805715 166 4 0.607133 168 4 0.502456 135 6 0.767033 32 3 0.7147066 212 4 0.918915 178 4 0.807265 199 5 0.884231 215 5 0.369705 157 4 0.271315 224 5 0.44085 142 4 0.066667 26 1 0.429046 81 3 0.3578739 228 5 0.581953 123 4 0.712130 180 5 0.8185733 247 4 0.814737 191 3 0.406284 176 4 0.853788 0.773488 0.72752 0.879572 0.883987 0.854976 0.670621 0.841210 0.655338 0.8812380 0.892935 0.613834 0.785969 0.80283 0.849801 0.4379085 0.611439 0.708958 0.837995 0.806473 0.756762 0.78142 0.899702 0.51911 0.801211 0.801136 0.773346 0.718351 0.8392562 0.873623 0.861343 0.861973 0.26450 0.239289 0.64591 0.119826 0.430761 0.381114 0.494833 0.693102 0.643635 0.577709 0.350643 2 0.826565 0.830118 -0.0070531 4 0.838431 0.73332 0.1051107 0.225044 0.8438429 lowCoverage 1 1 lowCoverage 0.371539 0.945749 lowCoverage 1 1 lowCoverage 0.0664234 0.11856 lowCoverage 1 lowCoverage 0.827025 0.375291 0.427978 5 0.838431 0.406155 0.432276 1.5069e-28 1.00000 hypermethylated 3.7672e-26 1 hypermethylated 2.5318e-11 0.99997 hypermethylated 2.5318e-08 1 hypermethylated 0.486593 0.00014208 lowCoverage 0.035520 lowCoverage 0.826828 0.613959 0.2132389 4 0.818234 0.612652 0.2055824 2.0253e-08 0.972742 lowCoverage 2.5316e-06 1 lowCoverage 3.9817e-04 0.912726 lowCoverage 3.9817e-02 1 lowCoverage 0.142434 0.1436910 lowCoverage 1.00000 lowCoverage 0.830212 0.376319 0.438487 4 0.704745 0.379342 0.325403 2.4698e-19 0.99123 lowCoverage 4.1164e-17 1 lowCoverage 2.4182e-10 0.97526 lowCoverage 2.4182e-07 1 lowCoverage 0.420170 0.00014769 lowCoverage 0.024615 lowCoverage 0.830212 0.615974 0.222702 4 0.70474 0.700174 0.0045709 1.7675e-06 0.30160673 lowCoverage 1.4729e-04 1.00000 lowCoverage 2.5039e-03 0.466537 lowCoverage 1.6693e-01 1 lowCoverage 0.076011 0.4103648 lowCoverage 1.00000 lowCoverage 0.374562 0.613959 -0.2029116 4 0.331924 0.612652 -0.2807281 0.99999832 9.6397e-06 lowCoverage 1.000000 8.1734e-04 lowCoverage 1.00000 0.00013406 lowCoverage 1 0.044686 lowCoverage -0.344159 0.0079466 lowCoverage 0.59063 lowCoverage chr11 20186902 20187902 106224 DBX1 ENSG00000109851 0.040171 307 5 0.024055 177 5 0.083386 152 5 0.014352 142 6 0.08442 104 5 0.052031 319 5 0.014069 139 5 0.016216 123 5 0.034286 143 5 0.011288 149 5 0.036793 187 5 0.097924 173 5 0.049466 160 5 NA 0 0 0.019768 206 5 0.01250 97 5 0.023469 158 5 0.012348 141 5 0.098435 110 5 0.012654 272 5 0.055789 52 5 0.00000 118 5 0.028580 252 5 0.068571 59 5 0.016897 91 5 0.016420 193 6 0.030375 133 5 0.079487 50 5 0.0066667 118 5 0.017848 243 5 0.040668 213 5 0.074726 308 5 0.022884 103 5 0.019222 121 5 0.20000 171 3 0.008000 85 5 0.057619 60 5 0.0098808 168 5 0.015844 359 6 0.021457 338 5 0.0053603 245 5 0.043315 354 5 0.029506 278 6 0.038273 0.022861 0.07880 0.019954 0.073972 0.070055 0.014852 0.016486 0.042857 0.0092846 0.037097 0.096344 0.045547 NA 0.019975 0.0095833 0.024830 0.013493 0.092726 0.014196 0.058091 0.00000 0.037361 0.07581 0.018603 0.019380 0.031924 0.074658 0.0061111 0.020319 0.046969 0.071178 0.02651 0.016911 0.17667 0.011333 0.067341 0.011409 0.015897 0.026650 0.010771 0.043356 0.035673 5 0.040209 0.037158 0.0021131 5 0.029333 0.02727 0.0020637 0.500424 0.9242892 insignificant 1 1 insignificant 0.333326 0.928664 insignificant 1 1 insignificant 0.0024870 0.81538 lowCoverage 1 lowCoverage 0.040221 0.019774 0.018606 5 0.034222 0.016862 0.017360 1.1284e-01 0.99943 insignificant 1.0000e+00 1 insignificant 1.4110e-01 0.99630 insignificant 1.0000e+00 1 insignificant -0.014112 0.66732721 lowCoverage 1.000000 lowCoverage 0.040209 0.025445 0.0123973 5 0.029333 0.019544 0.0097890 3.9133e-01 0.999040 insignificant 1.0000e+00 1 insignificant 7.0337e-01 0.989342 insignificant 1.0000e+00 1 insignificant 0.015726 0.1188372 lowCoverage 1.00000 lowCoverage 0.037179 0.019774 0.015187 5 0.031815 0.016862 0.014953 2.3593e-01 0.98170 insignificant 1.0000e+00 1 insignificant 3.9190e-01 0.90927 insignificant 1.0000e+00 1 insignificant -0.016599 0.61614308 lowCoverage 1.000000 lowCoverage 0.037158 0.025445 0.010266 5 0.02727 0.019544 0.0077253 4.5426e-01 0.97578138 insignificant 1.0000e+00 1.00000 insignificant 8.1195e-01 0.774102 insignificant 1.0000e+00 1 insignificant 0.013239 0.2134028 insignificant 1.00000 insignificant 0.019774 0.025478 -0.0061937 5 0.016862 0.022802 -0.0059398 0.93279110 7.1739e-01 insignificant 1.000000 1.0000e+00 insignificant 0.98258 0.61951378 insignificant 1 1.000000 insignificant 0.029838 0.3762904 lowCoverage 1.00000 lowCoverage chr11 20254284 20255284 106233 DBX1 ENSG00000109851 0.828350 345 7 0.810368 169 6 0.822608 166 7 0.796459 158 6 0.74603 49 5 0.837258 313 7 0.810756 122 6 0.869048 176 7 0.750994 113 6 0.783075 144 6 0.879199 201 7 0.800540 87 5 0.796225 193 6 NA 0 0 0.780996 151 7 0.74461 62 4 0.702567 92 6 0.486771 225 7 0.776658 142 6 0.835232 289 7 0.937612 77 7 0.25851 177 7 0.874659 201 7 0.793378 98 6 0.808896 51 5 0.824010 252 7 0.894925 108 7 0.884252 57 6 0.8711445 171 6 0.885009 270 7 0.732170 238 7 0.898965 391 7 0.572846 266 7 0.488477 119 6 0.50000 153 3 0.289116 57 5 0.596008 110 6 0.3648525 271 7 0.119664 418 7 0.540098 330 6 0.3460765 268 6 0.435502 278 7 0.482467 217 5 0.841110 0.841679 0.81774 0.786755 0.777270 0.842313 0.861651 0.895151 0.769985 0.8164497 0.907662 0.789360 0.766011 NA 0.819206 0.6847525 0.720657 0.535599 0.755015 0.826868 0.927622 0.29977 0.872241 0.79110 0.804165 0.829856 0.906008 0.895709 0.8463497 0.913142 0.750848 0.915478 0.50679 0.486045 0.32779 0.292781 0.566372 0.264127 0.108997 0.454418 0.383089 0.456240 0.465099 5 0.779168 0.774749 -0.0082027 7 0.794772 0.80095 -0.0061762 0.780633 0.5007157 insignificant 1 1 insignificant 0.998948 0.016443 weaklyHypometh 1 1 insignificant -0.0233079 0.68198 insignificant 1 insignificant 0.779168 0.489754 0.292374 7 0.794772 0.536522 0.258250 1.5198e-15 0.98343 hypermethylated 1.5198e-13 1 hypermethylated 2.5683e-08 1.00000 hypermethylated 8.5610e-06 1 hypermethylated 0.313437 0.00068324 hypermethylated 0.075916 hypermethylated 0.779168 0.250827 0.4809736 7 0.794772 0.331460 0.4633124 5.3782e-35 1.000000 hypermethylated 5.3782e-32 1 hypermethylated 2.2256e-13 1.000000 hypermethylated 2.2256e-10 1 hypermethylated 0.397225 0.0044178 weaklyHypermeth 0.53935 insignificant 0.774749 0.489754 0.293128 7 0.800948 0.536522 0.264426 1.3758e-09 0.98449 hypermethylated 9.1718e-08 1 hypermethylated 1.4591e-07 1.00000 hypermethylated 3.6476e-05 1 hypermethylated 0.336744 0.00031047 hypermethylated 0.038809 hypermethylated 0.774749 0.250827 0.489933 7 0.80095 0.331460 0.4694886 1.0222e-18 1.00000000 hypermethylated 1.0222e-15 1.00000 hypermethylated 3.9587e-10 1.000000 hypermethylated 3.9587e-07 1 hypermethylated 0.420533 0.0014663 weaklyHypermeth 0.48875 insignificant 0.489754 0.250827 0.1843935 7 0.536522 0.331460 0.2050627 0.00010910 8.1895e-01 weaklyHypermeth 0.054552 1.0000e+00 weaklyHypermeth 0.09151 0.73449125 insignificant 1 1.000000 insignificant 0.083788 0.3730760 insignificant 1.00000 insignificant chr11 28584786 28585786 106530 ENSG00000216849 0.813369 148 3 0.713581 91 5 0.457836 99 5 0.833086 177 5 0.90915 62 5 0.820563 239 5 0.816667 78 5 0.701521 105 5 0.775496 117 5 0.632291 127 3 0.836041 168 5 0.587667 85 5 0.626316 208 5 0.80567 85 5 0.788736 170 5 0.31503 54 3 0.485714 46 3 0.565674 280 5 0.710538 71 3 0.797568 131 5 0.800000 45 4 0.39421 133 5 0.827110 107 5 0.707660 40 4 0.699412 59 5 0.841071 217 5 0.572376 120 5 0.889510 41 3 0.8141574 135 5 0.822723 182 5 0.609897 135 5 0.798583 185 5 0.467912 155 5 0.216552 92 3 0.87317 264 5 0.496667 59 3 0.689180 104 5 0.2991762 142 5 0.673432 243 5 0.683568 240 5 0.6622184 265 5 0.586406 179 5 0.701629 311 5 0.781883 0.725109 0.32524 0.804354 0.864132 0.796752 0.807897 0.738507 0.792509 0.6816062 0.840410 0.656882 0.648649 0.84336 0.818011 0.2253256 0.357657 0.502915 0.654036 0.772940 0.826139 0.39159 0.872395 0.83984 0.655385 0.792192 0.590880 0.834029 0.8092499 0.821343 0.658221 0.781544 0.47775 0.195659 0.80383 0.536811 0.693998 0.429812 0.675707 0.728980 0.603018 0.636399 0.736923 3 0.701299 0.730522 -0.0295590 5 0.760862 0.60484 0.1560183 0.901370 0.6410199 insignificant 1 1 insignificant 0.808805 0.363857 insignificant 1 1 insignificant -0.0317667 0.56017 lowCoverage 1 lowCoverage 0.701181 0.571078 0.125230 5 0.713035 0.566155 0.146880 3.8013e-04 0.98729 weaklyHypermeth 1.1180e-02 1 weaklyHypermeth 2.2475e-03 0.99956 weaklyHypermeth 7.2500e-02 1 weaklyHypermeth 0.192516 0.11501899 lowCoverage 1.000000 lowCoverage 0.701181 0.686591 0.0200901 5 0.713035 0.655906 0.0571290 9.7650e-02 0.776431 insignificant 1.0000e+00 1 insignificant 1.3103e-01 0.825106 insignificant 1.0000e+00 1 insignificant 0.038175 0.3465555 lowCoverage 1.00000 lowCoverage 0.731044 0.571078 0.157755 5 0.725813 0.566155 0.159658 1.0218e-03 0.99223 weaklyHypermeth 3.0964e-02 1 weaklyHypermeth 4.1204e-04 0.99940 weaklyHypermeth 2.1686e-02 1 weaklyHypermeth 0.224283 0.07698281 lowCoverage 1.000000 lowCoverage 0.731044 0.686591 0.053883 5 0.72581 0.655906 0.0699071 1.2015e-01 0.81610801 insignificant 1.0000e+00 1.00000 insignificant 1.8631e-02 0.896195 weaklyHypermeth 9.8056e-01 1 insignificant 0.069942 0.1489162 lowCoverage 1.00000 lowCoverage 0.571078 0.686591 -0.1057571 5 0.566155 0.655906 -0.0897509 0.96385749 3.3060e-02 weaklyHypometh 1.000000 9.4618e-01 insignificant 0.99942 0.00962064 weaklyHypometh 1 0.455512 insignificant -0.154341 0.1841305 lowCoverage 1.00000 lowCoverage chr11 29990402 29991402 106623 ENSG00000214971 0.834082 167 8 0.727681 160 8 0.804525 161 8 1.000000 72 5 0.73447 99 8 0.897009 161 8 0.900747 175 8 0.782111 118 8 0.878022 89 6 0.925044 87 7 0.876948 211 8 0.823125 100 8 1.000000 126 8 0.72879 36 4 0.821812 163 8 0.69297 48 5 0.617787 86 5 0.991667 65 6 0.922846 175 8 0.942059 136 8 0.812500 59 5 0.82193 62 3 0.887397 153 8 0.831650 45 4 0.854825 53 2 0.970798 126 8 0.775815 111 8 0.837037 44 5 0.8492302 134 8 0.973648 129 7 0.934193 121 8 0.938396 235 8 0.840527 142 8 0.736879 189 8 0.68369 199 8 0.716667 22 2 0.691029 91 7 0.8559071 190 8 0.957100 218 8 0.902192 183 8 0.8028382 74 7 0.972647 113 7 0.960508 95 8 0.889774 0.802212 0.77884 1.000000 0.914490 0.902665 0.896317 0.910026 0.931237 0.9068550 0.884886 0.929223 1.000000 0.89846 0.907001 0.7713045 0.713336 0.988772 0.934504 0.942840 0.895395 0.82158 0.899031 0.84561 0.819391 0.961758 0.814253 0.910351 0.9104834 0.969095 0.917180 0.917266 0.80271 0.687833 0.66275 0.755526 0.764911 0.831409 0.961411 0.897504 0.911899 0.973251 0.949359 2 0.896099 0.899371 -0.0089483 8 0.793338 0.81523 -0.0218911 0.977026 0.5358252 insignificant 1 1 insignificant 0.953650 0.408204 insignificant 1 1 insignificant -0.0288666 0.35392 insignificant 1 insignificant 0.896382 0.751501 0.139611 8 0.835561 0.724859 0.110702 1.8783e-09 0.99618 weaklyHypermeth 9.8856e-08 1 weaklyHypermeth 3.7079e-05 0.96316 weaklyHypermeth 3.0899e-03 1 weaklyHypermeth 0.090969 0.03861214 weaklyHypermeth 1.000000 insignificant 0.896424 0.938507 -0.0367254 8 0.852005 0.851781 0.0002245 9.9383e-01 0.094111 insignificant 1.0000e+00 1 insignificant 9.8395e-01 0.201985 insignificant 1.0000e+00 1 insignificant -0.073972 0.0935710 insignificant 1.00000 insignificant 0.899842 0.751501 0.171473 8 0.864749 0.724859 0.139890 1.2075e-07 0.99985 weaklyHypermeth 6.3551e-06 1 weaklyHypermeth 7.0609e-05 0.99862 weaklyHypermeth 4.4131e-03 1 weaklyHypermeth 0.119835 0.00914984 weaklyHypermeth 0.397819 insignificant 0.899921 0.938507 -0.030993 8 0.87827 0.851781 0.0264938 9.4479e-01 0.31124866 insignificant 1.0000e+00 1.00000 insignificant 9.0969e-01 0.455468 insignificant 1.0000e+00 1 insignificant -0.045106 0.2590023 insignificant 1.00000 insignificant 0.751501 0.938416 -0.1976667 8 0.724859 0.835312 -0.1104527 0.99402286 3.2754e-05 weaklyHypometh 1.000000 2.1754e-03 weaklyHypometh 0.99873 0.00060408 weaklyHypometh 1 0.101363 insignificant -0.164941 0.0047408 weaklyHypometh 0.39506 insignificant chr11 32384970 32385970 106957 ENSG00000209623 0.682833 209 7 0.583573 147 6 0.693191 105 7 0.701291 140 7 0.80148 62 3 0.538792 364 7 0.778852 140 7 0.704469 132 6 0.804498 140 6 0.678193 101 6 0.745535 197 7 0.670343 123 7 0.614464 171 6 0.51389 13 1 0.896991 130 5 0.66387 73 5 0.625570 76 6 0.713199 138 5 0.644798 189 7 0.669200 333 7 0.576037 219 5 0.65208 86 5 0.622138 134 7 0.650347 89 6 0.743878 51 5 0.570684 249 7 0.809011 120 6 0.619067 131 6 0.6238425 139 6 0.713285 199 5 0.673200 236 7 0.719335 419 7 0.614655 150 7 0.559282 140 5 0.62930 102 7 0.618085 61 5 0.655813 220 5 0.5671872 189 8 0.648149 183 7 0.830989 228 7 0.6408145 172 7 0.681138 157 6 0.742825 204 7 0.798845 0.674280 0.78256 0.820966 0.870070 0.725317 0.854081 0.763075 0.844349 0.7650456 0.821593 0.800224 0.824874 0.79095 0.895256 0.7756668 0.715832 0.805686 0.737423 0.762031 0.755609 0.78882 0.796680 0.74642 0.815772 0.743149 0.820921 0.760739 0.7228783 0.777289 0.765181 0.792192 0.70705 0.614464 0.71934 0.674988 0.798654 0.686825 0.843381 0.883850 0.782928 0.822285 0.826629 5 0.757291 0.732625 0.0255030 6 0.662328 0.63117 0.0311533 0.038911 0.4113476 weaklyHypermeth 1 1 insignificant 0.048475 0.646245 weaklyHypermeth 1 1 insignificant 0.0218425 0.45620 insignificant 1 insignificant 0.757291 0.685615 0.076388 7 0.662328 0.598409 0.063919 7.0400e-05 0.97990 weaklyHypermeth 2.4276e-03 1 weaklyHypermeth 1.9211e-03 0.99942 weaklyHypermeth 7.0038e-02 1 weaklyHypermeth 0.078865 0.00542094 weaklyHypermeth 0.301164 insignificant 0.757291 0.806144 -0.0477523 7 0.662328 0.713986 -0.0516581 9.9261e-01 0.056646 insignificant 1.0000e+00 1 insignificant 8.7908e-01 0.105249 insignificant 1.0000e+00 1 insignificant -0.022532 0.5992722 insignificant 1.00000 insignificant 0.732625 0.685615 0.051013 6 0.631175 0.598409 0.032765 5.1028e-03 0.56556 weaklyHypermeth 1.2446e-01 1 insignificant 4.2521e-02 0.92771 weaklyHypermeth 9.0471e-01 1 insignificant 0.057022 0.03983372 weaklyHypermeth 1.000000 insignificant 0.732625 0.806144 -0.072288 6 0.63117 0.713986 -0.0828115 9.6430e-01 0.00094098 weaklyHypometh 1.0000e+00 0.47049 insignificant 8.8506e-01 0.014314 weaklyHypometh 1.0000e+00 1 insignificant -0.044374 0.3151255 insignificant 1.00000 insignificant 0.685615 0.806144 -0.1244103 7 0.598409 0.713986 -0.1155768 0.99950701 6.1250e-05 weaklyHypometh 1.000000 3.4028e-03 weaklyHypometh 0.99980 0.00113172 weaklyHypometh 1 0.104521 insignificant -0.101396 0.0428516 weaklyHypometh 1.00000 insignificant chr11 33884579 33885579 107035 LMO2 ENSG00000135363 0.872549 127 5 0.74672 300 5 0.851861 93 5 0.815359 69 5 0.886499 107 5 0.90249 234 5 0.92119 232 5 0.857993 105 5 0.833824 67 5 0.931429 44 5 0.94125 350 5 0.883333 64 5 1.000000 82 4 0.850000 56 3 0.913639 117 5 0.800000 38 3 1.000000 3 0 0.893826 103 5 0.925911 272 5 0.88759 155 5 0.988889 57 3 0.550000 16 0 0.79769 90 3 0.913971 69 5 0.816667 17 0 0.95239 255 5 0.877857 70 5 0.930556 88 5 0.906231 238 5 0.958503 248 5 0.940861 262 5 0.929932 192 5 0.8978788 127 5 0.9149184 59 5 0.951227 397 3 1.000000 5 0 0.91377 203 5 0.918733 285 5 0.57527 178 5 0.409524 131 5 0.65000 68 3 0.32857 44 3 0.762229 96 5 0.853395 0.7666921 0.877422 0.900086 0.894697 0.910009 0.915790 0.856224 0.788040 0.932287 0.931370 0.942059 1.00000 0.839595 0.927780 0.930636 0.978776 0.942358 0.945514 0.89007 0.980732 0.349711 0.837709 0.915930 0.7914258 0.9408027 0.867362 0.899647 0.9069554 0.959385 0.939587 0.898746 0.9073393 0.9169867 0.948462 1.000000 0.880676 0.9063000 0.564549 0.433251 0.715318 0.474814 0.783569 3 0.892284 0.91985 -0.02708849 5 0.88667 0.924674 -0.03800810 0.98723721 0.031177 weaklyHypometh 1.00000 1 insignificant 0.628756 0.091480 insignificant 1 1 insignificant 0.00547829 0.88373 lowCoverage 1 lowCoverage 0.892284 0.921860 -0.0297548 5 0.88667 0.92397 -0.0373078 6.7137e-01 0.0461790 weaklyHypometh 1.0000e+00 1 insignificant 8.9014e-01 0.083754 insignificant 1.0000e+00 1 insignificant -0.046980 3.8463e-02 lowCoverage 1.0000e+00 lowCoverage 0.892284 0.588008 0.30560525 5 0.88667 0.58499 0.30167472 7.7751e-21 1.0000e+00 hypermethylated 3.8876e-18 1.0000e+00 hypermethylated 1.7833e-10 1.0000e+00 hypermethylated 8.9166e-08 1.0000e+00 hypermethylated 0.3406555 1.1497e-02 lowCoverage 0.6763174 lowCoverage 0.919950 0.921933 -0.00245755 5 0.93723 0.93665 0.00058357 3.9650e-01 0.494812 insignificant 1.0000e+00 1 insignificant 8.7327e-01 0.42372 insignificant 1.0000e+00 1 insignificant -0.0524581 1.8116e-01 lowCoverage 1.0000e+00 lowCoverage 0.919850 0.588008 0.3314454 5 0.924674 0.58499 0.3396828 1.0522e-18 1.0000e+00 hypermethylated 4.6518e-16 1.0000e+00 hypermethylated 5.3069e-08 1.0000e+00 hypermethylated 2.6535e-05 1.0000e+00 hypermethylated 0.335177 0.00923293 lowCoverage 0.659495 lowCoverage 0.921860 0.588008 0.334187 5 0.923974 0.58499 0.338983 5.9445e-12 1.0000e+00 hypermethylated 2.9722e-09 1.0000e+00 hypermethylated 2.0750e-08 1.0000e+00 hypermethylated 1.0375e-05 1.0000e+00 hypermethylated 0.3876353 7.0624e-03 lowCoverage 0.4078007 lowCoverage chr11 33884713 33885713 107036 LMO2 ENSG00000135363 0.872549 127 5 0.78894 301 5 0.851861 93 5 0.846133 70 5 0.738749 108 5 0.90249 234 5 0.76766 233 5 0.857993 105 5 0.861520 68 5 0.942857 45 5 0.94125 350 5 0.736111 65 5 0.833333 83 4 0.850000 56 3 0.913639 117 5 0.800000 38 3 1.000000 3 0 0.893826 103 5 0.925911 272 5 0.88759 155 5 0.988889 57 3 0.550000 16 0 0.79769 90 3 0.913971 69 5 0.816667 17 0 0.95239 255 5 0.731548 71 5 0.950397 93 5 0.906231 238 5 0.958503 248 5 0.950717 263 5 0.929932 192 5 0.7482323 128 5 0.9149184 59 5 0.951227 397 3 1.000000 5 0 0.78323 204 5 0.918733 285 5 0.57527 178 5 0.409524 131 5 0.65000 68 3 0.32857 44 3 0.762229 96 5 0.853395 0.7666921 0.877422 0.900086 0.894697 0.910009 0.915790 0.856224 0.788040 0.932287 0.931370 0.942059 1.00000 0.839595 0.927780 0.930636 0.978776 0.942358 0.945514 0.89007 0.980732 0.349711 0.837709 0.915930 0.7914258 0.9408027 0.867362 0.899647 0.9069554 0.959385 0.939587 0.898746 0.9073393 0.9169867 0.948462 1.000000 0.880676 0.9063000 0.564549 0.433251 0.715318 0.474814 0.783569 3 0.891006 0.91953 -0.02828319 5 0.77619 0.917625 -0.14143435 0.99943623 0.013621 weaklyHypometh 1.00000 1 insignificant 0.885146 0.125008 insignificant 1 1 insignificant -0.00995708 0.80639 lowCoverage 1 lowCoverage 0.891006 0.920149 -0.0289206 5 0.77619 0.65998 0.1162087 9.1080e-01 0.1823328 insignificant 1.0000e+00 1 insignificant 8.9589e-01 0.276327 insignificant 1.0000e+00 1 insignificant -0.025435 5.7571e-01 lowCoverage 1.0000e+00 lowCoverage 0.892284 0.588008 0.30560525 5 0.88667 0.58499 0.30167472 7.7751e-21 1.0000e+00 hypermethylated 3.8876e-18 1.0000e+00 hypermethylated 1.7833e-10 1.0000e+00 hypermethylated 8.9166e-08 1.0000e+00 hypermethylated 0.3155025 1.4812e-02 lowCoverage 0.8228971 lowCoverage 0.919626 0.920223 -0.00082997 5 0.92792 0.70248 0.22543767 4.8164e-01 0.749640 insignificant 1.0000e+00 1 insignificant 8.9003e-01 0.71314 insignificant 1.0000e+00 1 insignificant -0.0154783 7.8107e-01 lowCoverage 1.0000e+00 lowCoverage 0.919850 0.588008 0.3314454 5 0.924674 0.58499 0.3396828 1.0522e-18 1.0000e+00 hypermethylated 4.6518e-16 1.0000e+00 hypermethylated 5.3069e-08 1.0000e+00 hypermethylated 2.6535e-05 1.0000e+00 hypermethylated 0.325460 0.01013579 lowCoverage 0.675719 lowCoverage 0.921860 0.588008 0.334187 5 0.923974 0.58499 0.338983 5.9445e-12 1.0000e+00 hypermethylated 2.9722e-09 1.0000e+00 hypermethylated 2.0750e-08 1.0000e+00 hypermethylated 1.0375e-05 1.0000e+00 hypermethylated 0.3409379 8.3659e-03 lowCoverage 0.4078007 lowCoverage chr11 34158957 34159957 107054 NAT10 ENSG00000135372 0.784644 204 6 0.80163 170 6 0.601193 183 6 0.697421 138 6 0.838018 124 6 0.81177 294 6 0.80423 169 6 0.857616 127 6 0.668155 138 6 0.920635 114 6 0.84943 218 6 0.832020 95 6 0.769700 125 6 0.944444 15 2 0.652749 171 6 0.773024 89 4 0.828671 113 4 0.695995 163 6 0.669836 126 6 0.73214 261 6 0.647059 61 4 0.515755 88 4 0.71395 184 6 0.778532 129 6 0.749306 58 4 0.79520 187 6 0.756280 160 6 0.717718 127 6 0.787645 144 6 0.912452 175 6 0.781179 198 6 0.803438 296 6 0.3798965 160 6 0.3250739 165 6 0.565891 90 3 0.600000 54 3 0.63404 111 6 0.495960 228 6 0.75922 222 6 0.889163 274 6 0.67879 137 6 0.56648 204 4 0.694227 168 6 0.788523 0.8276857 0.764261 0.789725 0.833208 0.840777 0.871925 0.883978 0.831226 0.918928 0.859418 0.816582 0.77294 0.820856 0.778183 0.763528 0.874736 0.685396 0.820048 0.76120 0.721152 0.608219 0.728603 0.816248 0.7390364 0.8284828 0.742539 0.840657 0.7729686 0.890516 0.809203 0.825546 0.3957103 0.3570302 0.526356 0.622646 0.781400 0.3569977 0.756024 0.898891 0.675884 0.741708 0.825503 4 0.797168 0.78694 0.01368784 6 0.66590 0.668043 -0.00214488 0.60804267 0.400773 insignificant 1.00000 1 insignificant 0.428108 0.662748 insignificant 1 1 insignificant 0.03012316 0.39142 insignificant 1 insignificant 0.797694 0.490099 0.3217782 6 0.77688 0.48642 0.2904596 6.4846e-17 0.9999989 hypermethylated 6.4846e-15 1 hypermethylated 3.4075e-08 0.999995 hypermethylated 4.2593e-06 1 hypermethylated 0.276522 1.6860e-03 weaklyHypermeth 8.4301e-02 weaklyHypermeth 0.797168 0.785075 0.01660328 6 0.66590 0.73120 -0.06530659 1.2452e-01 3.5330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1051e-01 7.9179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0590882 3.4309e-01 insignificant 1.0000000 insignificant 0.788248 0.490099 0.30971751 6 0.77938 0.48642 0.29296201 3.1014e-12 0.999992 hypermethylated 3.4460e-10 1 hypermethylated 1.0072e-05 0.99769 hypermethylated 7.1939e-04 1 hypermethylated 0.2463986 2.6849e-03 weaklyHypermeth 1.4834e-01 insignificant 0.786940 0.785075 0.0015224 6 0.668043 0.73120 -0.0631617 1.5708e-01 4.9006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1813e-01 6.0918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.028965 0.64445146 insignificant 1.000000 insignificant 0.490099 0.785643 -0.306796 6 0.486421 0.76974 -0.283317 9.9990e-01 8.0339e-06 hypomethylated 1.0000e+00 5.3560e-04 hypomethylated 9.8711e-01 1.6186e-03 weaklyHypometh 1.0000e+00 1.2451e-01 insignificant -0.2174335 1.6258e-02 weaklyHypometh 0.5747429 insignificant chr11 34323807 34324807 107067 ENSG00000201867 0.939153 151 4 0.60154 198 6 0.893939 68 4 0.968975 126 5 0.651190 41 3 0.95924 269 6 0.61769 70 4 0.860190 115 6 0.907407 57 4 0.795068 31 4 0.86545 251 6 0.928571 19 2 0.814216 44 4 0.944444 38 3 0.964286 52 4 0.722222 39 2 1.000000 2 0 0.716828 136 3 0.908826 141 5 0.87105 186 6 0.819022 66 4 1.000000 17 2 0.95190 71 5 0.697222 57 3 0.829856 101 1 0.93760 207 5 0.967361 55 4 0.936842 53 4 0.935069 152 3 0.966420 183 6 0.914569 168 6 0.937532 227 6 0.1934824 195 6 0.3301282 73 3 0.040000 150 4 0.350000 12 2 0.15940 169 6 0.300623 245 6 0.81173 102 4 0.836129 88 5 0.78921 114 5 0.90097 47 3 0.815530 124 6 0.970522 0.6185484 0.882917 0.988488 0.726321 0.937040 0.902271 0.877491 0.874237 0.880952 0.893247 0.882261 0.86492 0.933150 0.992151 0.636047 0.877514 0.822379 0.939283 0.92592 0.786479 1.000000 0.927686 0.865690 0.7571305 0.9106700 0.921245 0.869867 0.9016441 0.965467 0.843716 0.881611 0.2099316 0.1551846 0.010989 0.159141 0.109937 0.3189994 0.900343 0.918446 0.854170 0.912118 0.928571 2 0.857283 0.89283 -0.03542185 4 0.72891 0.930204 -0.20129394 0.99876798 0.030905 lowCoverage 1.00000 1 lowCoverage 0.995228 0.065239 lowCoverage 1 1 lowCoverage -0.06126851 0.10683 lowCoverage 1 lowCoverage 0.857706 0.206651 0.6520361 4 0.85040 0.21337 0.6370261 4.2205e-38 1.0000000 lowCoverage 1.4068e-35 1 lowCoverage 6.3207e-12 1.000000 lowCoverage 2.1069e-09 1 lowCoverage 0.617575 2.7173e-06 lowCoverage 3.8819e-04 lowCoverage 0.857706 0.810526 0.01404000 3 0.85040 0.82030 0.03009945 1.1810e-01 5.0043e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.0341e-02 6.7801e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0158015 6.4204e-01 lowCoverage 1.0000000 lowCoverage 0.892989 0.206161 0.69118377 4 0.93020 0.18289 0.74731635 3.0975e-38 1.000000 lowCoverage 1.0325e-35 1 lowCoverage 6.5405e-12 1.00000 lowCoverage 3.2702e-09 1 lowCoverage 0.6788438 2.5750e-06 lowCoverage 5.1500e-04 lowCoverage 0.892672 0.810526 0.0564120 3 0.918572 0.82030 0.0982757 1.7149e-08 7.5490e-01 lowCoverage 2.9924e-06 1.0000e+00 lowCoverage 1.5089e-03 7.8650e-01 lowCoverage 1.6766e-01 1.0000e+00 lowCoverage 0.077070 0.02620143 lowCoverage 1.000000 lowCoverage 0.206651 0.810526 -0.614735 5 0.213369 0.82030 -0.606927 1.0000e+00 1.9980e-22 hypomethylated 1.0000e+00 6.6599e-20 hypomethylated 1.0000e+00 1.8057e-07 hypomethylated 1.0000e+00 4.5143e-05 hypomethylated -0.6017738 1.5883e-05 lowCoverage 0.0042973 lowCoverage chr11 44248530 44249530 107659 EXT2 ENSG00000151348 0.872636 215 5 0.85038 49 4 0.713745 72 4 0.910635 90 5 0.635556 33 4 0.90278 196 5 0.84615 69 3 0.815722 74 4 0.914931 41 4 0.986111 58 4 0.91374 116 4 0.703125 41 3 0.975000 69 4 1.000000 10 1 0.856940 78 4 0.781250 35 3 1.000000 21 3 0.808743 158 5 0.875661 75 5 0.88513 139 5 0.926768 38 4 0.803785 39 4 0.73024 45 3 0.936538 43 4 0.900000 31 4 0.92196 94 5 0.863990 90 4 0.945055 31 3 0.959167 51 4 0.920545 106 5 0.918681 83 4 0.902125 181 5 0.2036713 75 4 0.6693182 44 4 0.062500 48 2 0.000000 119 4 0.34751 51 4 0.038954 197 5 0.85698 88 5 0.764031 133 5 0.82832 71 5 0.69479 93 5 0.893492 116 5 0.871889 0.8455579 0.737652 0.904221 0.851515 0.887952 0.905886 0.813824 0.933291 0.981061 0.925567 0.824337 0.98788 0.903430 0.865599 0.735480 0.973827 0.803872 0.919112 0.87319 0.920952 0.786131 0.778219 0.954079 0.8772727 0.9557351 0.873691 0.941142 0.9675758 0.917051 0.916334 0.900046 0.1395423 0.6452824 0.134126 0.000000 0.376217 0.0357069 0.856360 0.797052 0.774330 0.767706 0.883171 3 0.871184 0.89784 -0.03072548 4 0.87145 0.913760 -0.04231291 0.98770435 0.013569 lowCoverage 1.00000 1 lowCoverage 0.948405 0.148568 lowCoverage 1 1 lowCoverage -0.03165932 0.28745 lowCoverage 1 lowCoverage 0.870653 0.149813 0.7100847 5 0.72621 0.12528 0.6009238 3.8797e-36 1.0000000 hypermethylated 9.6993e-34 1 hypermethylated 4.8241e-09 1.000000 hypermethylated 9.6483e-07 1 hypermethylated 0.642086 1.3118e-03 lowCoverage 6.9041e-02 lowCoverage 0.871184 0.814371 0.05751830 5 0.87145 0.80865 0.06279276 2.4801e-02 9.9372e-01 weaklyHypermeth 9.5732e-01 1.0000e+00 insignificant 1.9427e-02 9.9608e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0548902 2.2625e-01 lowCoverage 1.0000000 lowCoverage 0.897837 0.150094 0.71749689 4 0.91376 0.15034 0.76342148 2.3361e-31 1.000000 lowCoverage 5.8402e-29 1 lowCoverage 5.2189e-09 1.00000 lowCoverage 1.3047e-06 1 lowCoverage 0.6737456 1.1014e-03 lowCoverage 8.4003e-02 lowCoverage 0.897837 0.814371 0.0882350 4 0.913760 0.80865 0.1051057 8.5950e-05 9.9992e-01 lowCoverage 6.6115e-03 1.0000e+00 lowCoverage 1.8507e-03 9.9957e-01 lowCoverage 1.8507e-01 1.0000e+00 lowCoverage 0.086550 0.07078498 lowCoverage 1.000000 lowCoverage 0.150094 0.814371 -0.686592 5 0.150338 0.80865 -0.658316 1.0000e+00 3.4182e-13 hypomethylated 1.0000e+00 6.8364e-11 hypomethylated 1.0000e+00 3.1010e-06 hypomethylated 1.0000e+00 5.1683e-04 hypomethylated -0.5871961 1.6466e-03 lowCoverage 0.1266585 lowCoverage chr11 45159222 45160222 107685 PRDM11 ENSG00000019485 0.125335 304 11 0.16159 148 9 0.094008 414 9 0.181685 382 12 0.187205 396 9 0.27484 310 11 0.26584 376 9 0.057848 400 9 0.061575 361 9 0.081731 538 9 0.15696 463 9 0.172555 436 9 0.090570 299 9 0.098133 313 9 0.085522 456 9 0.046507 365 9 0.333333 38 1 0.155633 309 11 0.085454 552 11 0.16312 270 11 0.081357 146 6 0.143294 191 7 0.20536 161 9 0.254499 153 7 0.515152 132 6 0.21851 580 12 0.057711 244 6 0.254649 114 6 0.100692 405 9 0.236342 419 11 0.083626 564 11 0.213325 300 11 0.1426332 267 9 0.0588235 279 9 0.223901 346 12 0.149242 178 8 0.06463 173 9 0.027399 632 11 0.19354 396 11 0.166888 308 11 0.24109 368 11 0.13563 239 11 0.308256 324 11 0.111354 0.0392787 0.105546 0.088937 0.052137 0.152006 0.127951 0.068990 0.075953 0.087551 0.128190 0.113374 0.11537 0.091778 0.096034 0.072171 NA 0.083487 0.111133 0.06260 0.072290 0.113588 0.062818 0.116392 0.1762002 0.0803118 0.088387 0.109452 0.0754353 0.103057 0.065294 0.107172 0.0094044 0.0142409 0.016494 0.073763 0.058213 0.0243049 0.147771 0.084518 0.148670 0.135113 0.089750 6 0.072651 0.08600 0.00021339 9 0.18528 0.250566 -0.06528171 0.86610899 0.777515 insignificant 1.00000 1 insignificant 0.742181 0.766373 insignificant 1 1 insignificant -0.05307109 0.19955 insignificant 1 insignificant 0.072671 0.045333 0.0623192 9 0.20708 0.15785 0.0492324 5.8808e-07 0.9993935 weaklyHypermeth 2.1003e-05 1 weaklyHypermeth 2.0986e-04 0.999606 weaklyHypermeth 9.5389e-03 1 weaklyHypermeth 0.032867 3.6946e-01 insignificant 1.0000e+00 insignificant 0.072643 0.124235 -0.04621980 9 0.20961 0.25974 -0.05013260 9.9367e-01 2.2769e-06 weaklyHypometh 1.0000e+00 7.5898e-04 weaklyHypometh 9.9943e-01 3.8744e-03 weaklyHypometh 1.0000e+00 7.7489e-01 insignificant -0.0651098 1.0462e-01 insignificant 1.0000000 insignificant 0.085756 0.045333 0.06181960 11 0.22122 0.15785 0.06337077 5.5340e-07 0.999593 weaklyHypermeth 2.7670e-05 1 weaklyHypermeth 1.1713e-03 0.99978 weaklyHypermeth 4.4808e-02 1 weaklyHypermeth 0.0859380 8.4890e-02 insignificant 1.0000e+00 insignificant 0.085604 0.124235 -0.0393228 11 0.281710 0.25974 0.0219690 9.8357e-01 1.3381e-03 weaklyHypometh 1.0000e+00 2.6762e-01 insignificant 9.8842e-01 4.8210e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.012039 0.80072645 insignificant 1.000000 insignificant 0.044896 0.124311 -0.092785 11 0.156675 0.27706 -0.120383 9.9988e-01 7.7536e-11 weaklyHypometh 1.0000e+00 1.2923e-08 weaklyHypometh 1.0000e+00 9.9857e-07 weaklyHypometh 1.0000e+00 1.9971e-04 weaklyHypometh -0.0979767 4.7461e-02 weaklyHypometh 1.0000000 insignificant chr11 45390117 45391117 107693 SYT13 ENSG00000019505 0.408470 293 8 0.38412 402 10 0.406157 140 9 0.474970 299 7 0.370216 81 7 0.52459 431 9 0.30724 150 9 0.396185 176 8 0.251066 88 7 0.469697 51 3 0.38430 359 9 0.387857 59 6 0.341451 90 8 0.287542 49 3 0.430556 51 2 0.250000 18 2 0.100000 6 1 0.349484 322 5 0.170927 232 5 0.44467 266 8 0.373177 68 7 0.571429 46 6 0.47123 102 6 0.406522 98 5 0.376513 235 7 0.38550 418 9 0.242852 104 9 0.346890 47 3 0.439396 145 5 0.342668 498 9 0.472018 417 9 0.480559 231 7 0.2802382 305 9 0.2741777 172 8 0.451994 492 7 0.310706 324 6 0.34636 270 10 0.227318 457 9 0.38489 312 7 0.335139 342 7 0.39070 448 7 0.34772 152 5 0.320942 333 7 0.355311 0.4500486 0.375207 0.430395 0.318750 0.600999 0.238814 0.434028 0.324267 0.479839 0.470535 0.296486 0.31867 0.443182 0.397177 0.079773 0.292042 0.247080 0.201423 0.41607 0.496151 0.533871 0.545521 0.595021 0.4545005 0.3375848 0.406395 0.392615 0.4615490 0.294107 0.462166 0.566798 0.2704204 0.4235772 0.351102 0.186447 0.323185 0.2352306 0.336421 0.230020 0.274821 0.263273 0.345701 2 0.369632 0.38471 -0.01852482 8 0.41768 0.343100 0.07458092 0.30440543 0.391422 insignificant 1.00000 1 insignificant 0.652578 0.026283 weaklyHypometh 1 1 insignificant -0.05208813 0.13545 insignificant 1 insignificant 0.369944 0.315503 0.0567492 8 0.45249 0.26823 0.1842529 6.8463e-03 0.9793629 weaklyHypermeth 1.2678e-01 1 insignificant 1.2221e-01 0.973394 insignificant 1.0000e+00 1 insignificant 0.041842 3.1183e-01 insignificant 1.0000e+00 insignificant 0.369309 0.291745 0.08108259 7 0.35726 0.36513 -0.00787139 5.2491e-02 7.0641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7868e-01 7.4548e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010971 9.6810e-01 insignificant 1.0000000 insignificant 0.384775 0.315503 0.07789387 9 0.34391 0.26823 0.07567909 7.0221e-04 0.907223 weaklyHypermeth 1.4941e-02 1 weaklyHypermeth 4.4692e-03 0.99710 weaklyHypermeth 1.2769e-01 1 insignificant 0.0939301 3.9230e-02 weaklyHypermeth 1.0000e+00 insignificant 0.385256 0.291745 0.0969961 7 0.382754 0.36513 0.0176239 8.3998e-03 4.2435e-01 weaklyHypermeth 3.9999e-01 1.0000e+00 insignificant 1.4868e-02 7.5898e-01 weaklyHypermeth 8.2602e-01 1.0000e+00 insignificant 0.053185 0.07753518 insignificant 1.000000 insignificant 0.315972 0.291929 0.043852 7 0.321881 0.40164 -0.079762 7.0424e-01 5.4671e-02 insignificant 1.0000e+00 9.5915e-01 insignificant 8.5048e-01 1.6110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0407448 2.7928e-01 insignificant 1.0000000 insignificant chr11 45874434 45875434 107709 MAPK8IP1 ENSG00000121653 0.207347 233 9 0.18909 397 7 0.312022 320 9 0.282331 166 8 0.292321 293 10 0.37951 377 9 0.32900 444 10 0.302125 276 10 0.252422 384 10 0.265201 342 10 0.33590 381 10 0.232590 313 10 0.128254 326 10 0.281736 134 6 0.238106 434 10 0.230823 311 9 0.140411 232 8 0.178550 214 9 0.210830 347 8 0.26961 355 8 0.277833 219 9 0.092237 188 8 0.31967 296 9 0.172007 245 9 0.309161 131 7 0.41581 478 9 0.159412 319 8 0.245566 216 8 0.203385 309 7 0.160781 476 10 0.100838 495 10 0.384612 378 9 0.1354779 339 10 0.1463501 281 8 0.066532 209 5 0.083333 52 5 0.13786 257 12 0.102800 399 9 0.20736 321 9 0.062337 315 9 0.11089 189 8 0.19954 218 8 0.087051 166 6 0.191316 0.1536585 0.285749 0.199170 0.216038 0.249447 0.287889 0.208514 0.257484 0.282766 0.360652 0.243462 0.11142 0.186357 0.120478 0.264845 0.076418 0.104982 0.179880 0.15677 0.269565 0.059480 0.273798 0.200549 0.2515758 0.2216865 0.160674 0.241795 0.2131532 0.144525 0.127416 0.397354 0.0457265 0.0510309 0.034381 0.131867 0.090882 0.0191146 0.057952 0.049033 0.064392 0.097911 0.073855 6 0.201338 0.18213 0.01147666 9 0.26203 0.204705 0.05732578 0.16467565 0.931836 insignificant 1.00000 1 insignificant 0.565807 0.917350 insignificant 1 1 insignificant 0.01613270 0.64130 insignificant 1 insignificant 0.201338 0.050098 0.1432335 9 0.26203 0.10298 0.1590465 3.5295e-14 0.9999660 weaklyHypermeth 2.7150e-12 1 weaklyHypermeth 4.1823e-08 0.999976 weaklyHypermeth 4.3581e-06 1 weaklyHypermeth 0.140850 1.4920e-06 weaklyHypermeth 2.4867e-04 weaklyHypermeth 0.201212 0.062035 0.12514161 8 0.25555 0.19981 0.05574370 1.4088e-11 9.9867e-01 weaklyHypermeth 2.3479e-09 1.0000e+00 weaklyHypermeth 4.7504e-08 9.9975e-01 weaklyHypermeth 1.1876e-05 1.0000e+00 weaklyHypermeth 0.1194726 1.0802e-02 weaklyHypermeth 0.6763174 insignificant 0.182133 0.050098 0.13106144 9 0.20470 0.10298 0.10172070 3.9952e-08 0.999803 weaklyHypermeth 2.6634e-06 1 weaklyHypermeth 3.0692e-06 0.99951 weaklyHypermeth 2.7902e-04 1 weaklyHypermeth 0.1247172 2.1510e-03 weaklyHypermeth 1.3444e-01 insignificant 0.182402 0.062035 0.1155808 8 0.215050 0.19981 0.0152451 3.7084e-07 9.8730e-01 weaklyHypermeth 4.6355e-05 1.0000e+00 weaklyHypermeth 1.7629e-06 9.9863e-01 weaklyHypermeth 4.4073e-04 1.0000e+00 weaklyHypermeth 0.103340 0.03195037 weaklyHypermeth 1.000000 insignificant 0.049706 0.062035 -0.013840 8 0.100983 0.19981 -0.098822 8.5036e-01 1.2139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8164e-01 2.9643e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0213773 5.3678e-01 insignificant 1.0000000 insignificant chr11 45995433 45996433 107720 GYLTL1B ENSG00000165905 0.848721 459 15 0.82711 191 14 0.777910 96 8 0.811466 406 15 0.887013 55 6 0.87478 355 14 0.81389 94 8 0.663540 82 9 0.723383 78 6 0.939632 87 8 0.81471 266 16 0.727273 78 7 0.876269 140 12 NA 0 0 0.803062 134 11 0.834524 44 6 0.837521 78 6 0.869293 441 15 0.818525 126 10 0.86113 356 15 0.728932 48 5 0.772844 169 12 0.88235 292 16 0.931111 54 5 0.853137 122 6 0.80351 210 15 0.863054 103 9 0.828571 65 6 0.871083 107 8 0.853901 261 15 0.816856 223 14 0.837802 452 15 0.6974830 132 9 0.7842512 126 8 0.799231 235 15 0.694508 70 6 0.84990 56 6 0.819766 252 15 0.85822 290 12 0.901804 443 15 0.86914 403 15 0.90022 342 15 0.872021 445 15 0.876619 0.8531985 0.765629 0.897787 0.881923 0.892701 0.927335 0.842877 0.771227 0.919803 0.862771 0.854589 0.90452 NA 0.848043 0.866622 0.908221 0.868410 0.873002 0.84914 0.781821 0.797453 0.922668 0.936809 0.9025555 0.8950120 0.868505 0.959716 0.8704170 0.894222 0.844040 0.852246 0.7653805 0.7948444 0.857072 0.751328 0.931900 0.8606402 0.868597 0.887681 0.907231 0.897911 0.895904 3 0.859748 0.84926 0.00551325 14 0.83857 0.842918 -0.00434760 0.36176665 0.659815 insignificant 1.00000 1 insignificant 0.632650 0.481792 insignificant 1 1 insignificant -0.01536439 0.47610 insignificant 1 insignificant 0.859748 0.810345 0.0463914 13 0.83857 0.78498 0.0535927 2.2307e-03 0.9998607 weaklyHypermeth 4.4614e-02 1 weaklyHypermeth 1.7708e-01 0.981511 insignificant 1.0000e+00 1 insignificant 0.047376 1.5335e-01 insignificant 1.0000e+00 insignificant 0.859748 0.902756 -0.02608664 14 0.83857 0.87973 -0.04116251 9.8375e-01 2.3733e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2763e-01 7.8539e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0587135 2.6165e-03 weaklyHypometh 0.2378670 insignificant 0.849003 0.809414 0.04407689 14 0.83255 0.73880 0.09374770 2.7281e-03 0.998389 weaklyHypermeth 5.0519e-02 1 weaklyHypermeth 8.7185e-02 0.99491 insignificant 1.0000e+00 1 insignificant 0.0627399 7.1015e-02 insignificant 1.0000e+00 insignificant 0.849263 0.902756 -0.0272479 14 0.842918 0.87973 -0.0368149 9.9036e-01 3.9232e-03 weaklyHypometh 1.0000e+00 5.6045e-01 insignificant 8.7243e-01 6.4547e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.043349 0.02633228 weaklyHypometh 1.000000 insignificant 0.810345 0.902756 -0.065040 13 0.784978 0.87973 -0.094755 9.9743e-01 5.8256e-05 weaklyHypometh 1.0000e+00 3.2364e-03 weaklyHypometh 9.8929e-01 3.9517e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1060890 8.4956e-03 weaklyHypometh 0.4078007 insignificant chr11 46121165 46122165 107761 PHF21A ENSG00000135365 0.975816 111 9 0.76402 127 6 0.816493 134 6 0.890862 91 6 0.858775 120 6 0.83992 75 6 0.87873 208 6 0.826157 73 5 0.911120 110 6 0.834392 80 5 0.88337 226 6 0.929712 188 5 0.942742 112 5 1.000000 2 0 0.927813 144 6 0.800361 170 5 0.863916 146 5 0.889957 43 3 0.794184 127 6 0.90397 69 7 0.631683 76 6 0.821429 22 1 0.84959 80 6 0.887850 72 6 0.956522 71 1 0.83612 104 8 0.780672 72 6 0.862284 40 4 0.933654 58 5 0.942123 104 6 0.848429 92 6 0.964351 109 6 0.6024955 74 7 0.7959450 129 6 0.851429 40 1 0.711538 33 1 0.76546 84 6 0.808867 109 6 0.77453 101 9 0.891139 138 8 0.80833 44 1 0.82366 36 4 0.886371 113 12 0.935463 0.7301918 0.834166 0.964294 0.897673 0.890365 0.848314 0.782015 0.897274 0.841216 0.868421 0.900917 0.93220 NA 0.904664 0.933525 0.868026 0.937419 0.922408 0.85434 0.876224 0.783293 0.813286 0.862197 0.8722289 0.8310980 0.843137 0.866415 0.9178455 0.898472 0.745199 0.920631 0.6168162 0.8213548 0.823248 0.770535 0.811590 0.7684867 0.914245 0.875047 0.887006 0.912530 0.785428 0 0.877986 0.85794 0.02154114 6 0.90814 0.829358 0.07878092 0.46134689 0.661686 insignificant 1.00000 1 insignificant 0.620967 0.815511 insignificant 1 1 insignificant 0.01705679 0.57741 insignificant 1 insignificant 0.877516 0.727079 0.1332508 6 0.88517 0.82626 0.0589179 2.2374e-06 0.9785936 weaklyHypermeth 7.2175e-05 1 weaklyHypermeth 2.8120e-02 0.997906 weaklyHypermeth 6.1131e-01 1 insignificant 0.120659 1.8402e-02 lowCoverage 5.7860e-01 lowCoverage 0.878090 0.877030 -0.00895075 5 0.90814 0.91533 -0.00719545 9.6160e-01 7.1772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5377e-01 9.5377e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0398083 1.7541e-01 insignificant 1.0000000 insignificant 0.856979 0.727079 0.12578284 6 0.80753 0.82626 -0.01872487 1.5501e-02 0.999935 weaklyHypermeth 2.5835e-01 1 insignificant 3.6902e-01 0.99865 insignificant 1.0000e+00 1 insignificant 0.1036023 4.2474e-02 lowCoverage 1.0000e+00 lowCoverage 0.858903 0.876744 -0.0239680 5 0.888598 0.90929 -0.0206890 7.8681e-01 5.3649e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5772e-01 8.8952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.022752 0.52659846 insignificant 1.000000 insignificant 0.726496 0.870416 -0.140477 5 0.810461 0.88455 -0.074086 8.3356e-01 1.3243e-02 weaklyHypometh 1.0000e+00 3.0841e-01 insignificant 9.2402e-01 2.4757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0808508 9.3886e-02 lowCoverage 1.0000000 lowCoverage chr11 46341355 46342355 107784 DGKZ ENSG00000149091 0.901256 497 10 0.79750 252 10 0.745312 251 10 0.904050 545 10 0.921570 158 7 0.82318 529 10 0.84829 212 9 0.919386 288 10 0.858937 221 10 0.855071 207 10 0.90067 273 10 0.844819 136 8 0.698435 301 10 0.824421 153 7 0.778716 228 10 0.671296 85 3 0.523201 54 5 0.848726 646 10 0.901805 289 9 0.90034 370 10 0.778324 166 10 0.732791 259 10 0.86175 296 10 0.822637 147 10 0.799867 245 10 0.88088 357 10 0.686293 279 10 0.859190 145 8 0.799422 335 9 0.854083 464 10 0.804814 360 10 0.905468 529 10 0.6368686 209 10 0.5541163 360 10 0.621324 161 7 0.290250 95 7 0.47046 232 10 0.491615 413 10 0.65768 361 10 0.743238 408 10 0.72754 369 10 0.75896 415 8 0.761062 368 10 0.880748 0.7934720 0.742616 0.867949 0.874933 0.894567 0.917447 0.887781 0.885201 0.896047 0.906373 0.828914 0.78885 0.866163 0.813343 0.744045 0.665114 0.743944 0.897652 0.90017 0.923840 0.633358 0.836663 0.834500 0.8550139 0.8888512 0.820083 0.935574 0.8346149 0.870764 0.873839 0.903738 0.5445433 0.4152898 0.427070 0.218604 0.594143 0.3303335 0.635983 0.679171 0.688006 0.711823 0.714694 7 0.851949 0.85256 -0.00136465 10 0.80887 0.748474 0.06039230 0.44959334 0.919842 insignificant 1.00000 1 insignificant 0.136399 0.917819 insignificant 1 1 insignificant 0.00788885 0.78639 insignificant 1 insignificant 0.851696 0.486376 0.3755011 10 0.72946 0.45845 0.2710119 1.9062e-26 0.9999999 hypermethylated 3.8125e-24 1 hypermethylated 1.9511e-07 1.000000 hypermethylated 1.6259e-05 1 hypermethylated 0.312577 8.8229e-04 hypermethylated 5.5143e-02 hypermethylated 0.852197 0.701197 0.15881665 10 0.84168 0.68904 0.15263884 3.0455e-11 9.9837e-01 weaklyHypermeth 4.3508e-09 1.0000e+00 weaklyHypermeth 5.8020e-09 9.9952e-01 weaklyHypermeth 1.9340e-06 1.0000e+00 weaklyHypermeth 0.0936535 5.6383e-03 weaklyHypermeth 0.4337184 insignificant 0.852949 0.486376 0.37557598 10 0.75393 0.45845 0.29548237 1.6603e-18 1.000000 hypermethylated 3.3206e-16 1 hypermethylated 2.7958e-07 1.00000 hypermethylated 5.5915e-05 1 hypermethylated 0.3046885 1.2600e-03 weaklyHypermeth 8.4003e-02 weaklyHypermeth 0.853822 0.701197 0.1559818 10 0.792993 0.68904 0.1039509 8.1326e-09 9.9992e-01 weaklyHypermeth 2.0331e-06 1.0000e+00 weaklyHypermeth 3.7610e-05 9.9972e-01 weaklyHypermeth 6.2683e-03 1.0000e+00 weaklyHypermeth 0.085765 0.00734327 weaklyHypermeth 0.611939 insignificant 0.488038 0.701562 -0.224755 10 0.573057 0.74646 -0.173406 9.9958e-01 1.0160e-06 hypomethylated 1.0000e+00 7.8152e-05 hypomethylated 9.9771e-01 5.9100e-04 hypomethylated 1.0000e+00 5.3727e-02 hypomethylated -0.2189239 6.7317e-03 weaklyHypometh 0.4078007 insignificant chr11 46969202 46970202 107838 C11orf49 ENSG00000149179 0.467547 117 4 0.61797 109 6 0.542460 58 5 0.755747 100 4 0.562500 37 2 0.67501 115 6 0.66032 49 5 0.426478 76 6 0.546751 52 5 0.666667 35 2 0.65135 155 6 0.555556 13 0 0.432268 70 6 0.300000 10 0 0.479497 51 5 0.547619 26 2 0.383333 10 1 0.547830 116 4 0.578344 79 5 0.61947 113 6 0.529870 33 3 0.600000 10 2 0.58472 60 6 0.645986 78 5 0.587302 52 3 0.64440 90 7 0.637188 39 3 0.388889 40 5 0.649745 106 6 0.644705 128 7 0.644995 99 6 0.534673 113 5 0.4230404 143 7 0.5202327 58 5 0.464753 118 6 0.500000 10 0 0.48898 97 4 0.635245 114 6 0.45471 78 3 0.633432 81 4 0.64762 102 3 0.33929 43 3 0.604167 84 4 0.589294 0.6410806 0.520440 0.723487 0.641509 0.640242 0.615813 0.570910 0.576127 0.660377 0.629188 0.547170 0.49332 0.566038 0.526280 0.439353 0.505507 0.627562 0.611968 0.66643 0.625386 0.648539 0.586164 0.583281 0.6886792 0.6634121 0.637017 0.607547 0.6408382 0.614269 0.595641 0.621204 0.5220885 0.4040809 0.455806 0.515723 0.497339 0.6409505 0.614028 0.616231 0.602156 0.553908 0.641509 1 0.555396 0.58491 0.00522752 5 0.57511 0.574908 0.00020684 0.71041113 0.396704 insignificant 1.00000 1 insignificant 0.735220 0.412296 insignificant 1 1 insignificant -0.04020412 0.23798 lowCoverage 1 lowCoverage 0.554996 0.496296 0.0844091 5 0.51760 0.43315 0.0844582 3.2210e-03 0.9835447 weaklyHypermeth 6.0773e-02 1 weaklyHypermeth 1.4863e-02 0.972001 weaklyHypermeth 3.3779e-01 1 insignificant 0.045461 2.5855e-01 lowCoverage 1.0000e+00 lowCoverage 0.566176 0.505155 0.00046068 3 0.63867 0.64051 -0.00184383 6.5085e-01 4.7380e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.1625e-01 2.9532e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0149924 8.2578e-01 lowCoverage 1.0000000 lowCoverage 0.584906 0.497217 0.08318922 5 0.57491 0.48127 0.09363555 1.5605e-04 0.988396 weaklyHypermeth 4.4585e-03 1 weaklyHypermeth 1.2967e-02 0.98761 weaklyHypermeth 2.9471e-01 1 insignificant 0.0856649 4.0471e-02 lowCoverage 1.0000e+00 lowCoverage 0.592593 0.505155 0.0075867 3 0.646772 0.64051 0.0062568 5.9491e-01 7.1889e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.5612e-01 5.5945e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.055197 0.42646625 lowCoverage 1.000000 lowCoverage 0.500935 0.505155 -0.087350 3 0.541432 0.64051 -0.099083 9.9818e-01 2.7196e-02 lowCoverage 1.0000e+00 5.9122e-01 lowCoverage 9.9966e-01 3.1307e-02 lowCoverage 1.0000e+00 8.6965e-01 lowCoverage -0.0304684 6.6445e-01 lowCoverage 1.0000000 lowCoverage chr11 47126962 47127962 107855 C11orf49 ENSG00000149179 0.887558 115 5 0.78680 123 5 0.966667 41 4 0.933504 152 5 0.933333 18 2 0.91506 200 5 0.93333 13 0 0.915163 69 4 0.921905 80 4 0.895556 40 4 0.93468 119 5 1.000000 9 0 0.951555 145 4 0.863636 32 4 0.961648 54 4 1.000000 18 2 0.666667 6 0 0.917126 138 4 0.967437 63 4 0.92645 112 5 0.774038 35 2 0.854218 72 4 0.92000 45 5 1.000000 37 2 0.862500 50 4 0.94076 145 5 0.943653 47 3 0.783333 17 2 0.870588 80 4 0.946868 122 5 0.949224 156 5 0.886124 166 5 0.0591902 139 4 0.1547988 73 4 0.200000 126 5 0.060000 28 2 0.12244 69 4 0.103478 166 5 0.98000 58 5 0.916536 126 5 0.92565 124 5 0.79622 48 4 0.716039 123 5 0.836406 0.7940476 0.944444 0.920513 0.888889 0.918488 0.888889 0.890087 0.903175 0.862963 0.918919 1.000000 0.95419 0.818182 0.964015 1.000000 0.811727 0.882457 0.966387 0.89863 0.823718 0.850267 0.900000 1.000000 0.9375000 0.9496620 0.906089 0.822222 0.8581699 0.953327 0.956056 0.864026 0.0736949 0.1878225 0.166667 0.100000 0.167037 0.1111684 0.983333 0.920744 0.909495 0.775910 0.632684 2 0.908856 0.91564 -0.00707765 4 0.91034 0.919042 -0.00870342 0.79902600 0.334741 lowCoverage 1.00000 1 lowCoverage 0.244085 0.807365 lowCoverage 1 1 lowCoverage 0.01962880 0.45762 lowCoverage 1 lowCoverage 0.908856 0.103161 0.8018273 4 0.91034 0.09791 0.8124283 5.3385e-71 1.0000000 lowCoverage 2.6692e-68 1 lowCoverage 8.0301e-14 1.000000 lowCoverage 4.0150e-11 1 lowCoverage 0.797252 8.2315e-12 lowCoverage 2.0579e-09 lowCoverage 0.908856 0.851775 0.06046554 4 0.91034 0.86585 0.04448374 6.0114e-03 9.3522e-01 lowCoverage 3.0057e-01 1.0000e+00 lowCoverage 1.8076e-02 9.8149e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0470161 3.9907e-01 lowCoverage 1.0000000 lowCoverage 0.915638 0.103161 0.80926079 4 0.91904 0.09791 0.82113172 9.4305e-50 1.000000 lowCoverage 4.7153e-47 1 lowCoverage 2.0740e-11 1.00000 lowCoverage 6.9132e-09 1 lowCoverage 0.7776235 3.3037e-12 lowCoverage 3.3037e-09 lowCoverage 0.915638 0.851775 0.0684795 4 0.919042 0.86585 0.0531872 2.1486e-02 9.7267e-01 lowCoverage 9.3417e-01 1.0000e+00 lowCoverage 2.6601e-01 7.9214e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.027387 0.62018161 lowCoverage 1.000000 lowCoverage 0.103161 0.851775 -0.739779 5 0.097910 0.86585 -0.767945 1.0000e+00 1.6221e-25 hypomethylated 1.0000e+00 8.1105e-23 hypomethylated 1.0000e+00 1.2046e-07 hypomethylated 1.0000e+00 4.0153e-05 hypomethylated -0.7502361 1.1781e-05 lowCoverage 0.0042973 lowCoverage chr11 47160809 47161809 107857 ARFGAP2 ENSG00000149182 0.970664 167 6 0.81929 176 7 0.945330 203 7 0.952352 209 5 0.764286 53 5 0.81917 179 7 0.90803 124 5 0.964269 118 5 0.884866 177 5 0.872581 123 5 0.84651 114 5 0.776720 96 5 0.978378 138 5 0.932667 85 5 0.955455 115 5 0.932262 107 5 0.830361 61 5 0.972458 218 5 0.719571 47 5 0.91489 172 6 0.791667 47 5 0.924228 128 5 0.81290 147 7 0.795752 59 5 0.975524 93 5 0.97194 191 7 0.859856 91 6 0.981250 69 5 0.921296 61 5 0.947357 172 7 0.918972 124 7 0.916186 196 7 0.8485348 100 7 0.6631944 56 5 0.800000 66 4 0.825000 42 2 0.81901 103 6 0.959833 121 7 0.94319 220 5 0.969795 219 6 0.85429 166 5 0.96740 189 5 0.974413 168 5 0.966340 0.9280054 0.941750 0.932345 0.918188 0.921376 0.884794 0.957713 0.882766 0.946760 0.928640 0.938536 0.98214 0.922595 0.955186 0.925677 0.926918 0.964225 0.871125 0.90867 0.940529 0.920223 0.957109 0.872558 0.9772342 0.9721976 0.816151 0.972742 0.9706314 0.947006 0.918600 0.938594 0.8166239 0.8348018 0.752989 0.852974 0.893142 0.9539161 0.933203 0.957968 0.975704 0.958934 0.973125 5 0.927666 0.93759 -0.00782571 6 0.88269 0.902468 -0.01978027 0.91727335 0.298773 insignificant 1.00000 1 insignificant 0.902304 0.433592 insignificant 1 1 insignificant -0.01340542 0.61861 insignificant 1 insignificant 0.927666 0.881148 0.0544805 6 0.88269 0.83556 0.0471288 1.1604e-02 0.5159873 weaklyHypermeth 2.1099e-01 1 insignificant 6.2781e-01 0.563199 insignificant 1.0000e+00 1 insignificant 0.068743 1.5004e-01 insignificant 1.0000e+00 insignificant 0.927666 0.938669 -0.01520630 5 0.88269 0.90623 -0.02353823 9.9060e-01 1.2765e-03 weaklyHypometh 1.0000e+00 2.1274e-01 insignificant 9.9111e-01 7.1288e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0538128 8.9933e-02 insignificant 1.0000000 insignificant 0.937591 0.881148 0.05928804 7 0.90247 0.83556 0.06690908 3.0800e-02 0.962610 weaklyHypermeth 4.9677e-01 1 insignificant 4.4610e-01 0.69284 insignificant 1.0000e+00 1 insignificant 0.0821481 9.8456e-02 insignificant 1.0000e+00 insignificant 0.937591 0.938669 -0.0158645 5 0.902468 0.90623 -0.0037580 9.2531e-01 5.3693e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7083e-01 4.6887e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.040407 0.20897880 insignificant 1.000000 insignificant 0.881148 0.938669 -0.082202 5 0.835559 0.90623 -0.070667 9.9988e-01 4.1510e-02 weaklyHypometh 1.0000e+00 7.9827e-01 insignificant 9.9828e-01 2.4095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1225555 2.6547e-02 weaklyHypometh 0.7807887 insignificant chr11 47162536 47163536 107858 ARFGAP2 ENSG00000149182 0.238081 414 8 0.22659 435 8 0.328980 508 8 0.202035 402 8 0.164911 322 8 0.50042 587 8 0.29591 352 8 0.272924 487 8 0.243124 523 8 0.360797 454 8 0.31178 415 8 0.165363 429 7 0.136966 426 7 0.160990 432 8 0.155153 681 8 0.186330 479 8 0.142857 29 3 0.263633 584 8 0.165473 498 8 0.25928 376 8 0.292759 177 8 0.264628 243 7 0.25441 300 8 0.227102 216 8 0.293352 175 8 0.27707 488 8 0.255251 537 8 0.156755 396 8 0.307862 455 8 0.246914 624 8 0.213302 504 8 0.331197 420 8 0.2809506 323 8 0.2072871 275 8 0.639943 79 2 0.321913 67 6 0.36714 493 8 0.112373 422 8 0.39586 471 8 0.283191 325 8 0.26495 271 8 0.22780 454 8 0.451603 339 8 0.203468 0.1976145 0.290967 0.167365 0.158228 0.371090 0.250198 0.160478 0.184016 0.282077 0.257951 0.157012 0.13575 0.131639 0.139329 0.144556 0.097692 0.210602 0.136047 0.21370 0.203534 0.260729 0.233879 0.180464 0.2433099 0.2368370 0.229234 0.175262 0.1659744 0.187861 0.167009 0.280049 0.2695104 0.1560975 0.286525 0.276459 0.259817 0.0884736 0.345706 0.283598 0.226671 0.202905 0.377125 7 0.200951 0.22404 -0.01408315 8 0.29311 0.244280 0.04882666 0.70259147 0.443815 insignificant 1.00000 1 insignificant 0.815775 0.197673 insignificant 1 1 insignificant -0.02097015 0.39521 insignificant 1 insignificant 0.200883 0.205546 0.0211603 8 0.27012 0.32070 -0.0505772 4.0218e-01 0.0048088 inconclusive 1.0000e+00 1 insignificant 8.5321e-01 0.072138 insignificant 1.0000e+00 1 insignificant -0.082521 3.2193e-01 insignificant 1.0000e+00 insignificant 0.200815 0.303226 -0.07188011 8 0.27012 0.34386 -0.07374186 8.1988e-01 2.1180e-11 weaklyHypometh 1.0000e+00 1.0590e-08 weaklyHypometh 9.8173e-01 3.0508e-04 weaklyHypometh 1.0000e+00 7.6270e-02 weaklyHypometh -0.0856020 1.1816e-01 insignificant 1.0000000 insignificant 0.224233 0.205546 0.03872366 8 0.27142 0.32070 -0.04927352 1.9867e-01 0.075222 insignificant 1.0000e+00 1 insignificant 7.7903e-01 0.24218 insignificant 1.0000e+00 1 insignificant -0.0615504 4.4514e-01 insignificant 1.0000e+00 insignificant 0.223769 0.303226 -0.0598108 8 0.229756 0.34386 -0.1141048 5.8830e-01 2.0493e-07 weaklyHypometh 1.0000e+00 1.0246e-04 weaklyHypometh 9.2226e-01 3.0266e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.064632 0.20747621 insignificant 1.000000 insignificant 0.204587 0.303014 -0.086748 8 0.235783 0.32434 -0.088560 9.7777e-01 8.0678e-03 weaklyHypometh 1.0000e+00 2.1952e-01 insignificant 9.2950e-01 6.0137e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0030814 9.7192e-01 insignificant 1.0000000 insignificant chr11 47305044 47306044 107863 MADD ENSG00000110514 0.825092 133 9 0.95644 90 5 0.949035 120 5 0.750000 68 9 0.935664 61 5 0.82171 95 7 0.92364 54 5 0.944444 34 5 0.892270 70 5 0.931818 57 5 0.92121 144 5 0.707143 37 5 0.937402 80 5 NA 0 0 0.975000 61 5 0.850000 28 2 0.960000 17 3 0.656667 70 9 0.927473 67 5 0.62019 97 5 0.986111 57 5 0.900000 14 0 0.71251 105 7 0.800000 32 3 1.000000 12 0 0.77389 74 6 0.872222 79 5 1.000000 13 0 0.927473 52 5 0.757953 124 5 0.766340 84 5 0.827110 160 8 0.8869048 56 5 0.8311761 101 5 1.000000 85 5 1.000000 30 3 0.95000 39 5 0.851852 86 5 0.74091 111 9 0.841949 138 8 0.84848 69 5 0.97551 108 7 0.755784 96 5 0.901906 0.9442586 0.948687 1.000000 0.934758 0.921526 0.911888 0.923077 0.897755 0.921329 0.914086 0.714286 0.94389 NA 0.978022 0.859890 0.953846 0.803846 0.916314 0.99112 0.980769 0.923077 0.941778 0.846154 1.0000000 0.9644970 0.827656 1.000000 0.9304432 0.915155 0.922323 0.931592 0.8763736 0.8469051 1.000000 1.000000 0.954670 1.0000000 0.988012 0.979432 0.958042 0.986813 0.986425 0 0.895728 0.89277 -0.00460711 5 0.80231 0.794361 0.00795320 0.83102873 0.655194 insignificant 1.00000 1 insignificant 0.988917 0.402064 insignificant 1 1 insignificant 0.00734041 0.85084 lowCoverage 1 lowCoverage 0.895544 0.926952 -0.0144674 5 0.78961 0.81520 -0.0255925 9.5914e-01 0.5272185 insignificant 1.0000e+00 1 insignificant 9.9985e-01 0.269985 insignificant 1.0000e+00 1 insignificant -0.052347 2.0537e-01 lowCoverage 1.0000e+00 lowCoverage 0.895728 0.894434 -0.04972342 5 0.80231 0.81804 -0.01573033 8.1754e-01 3.6967e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6492e-01 5.4508e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0351142 4.9438e-01 insignificant 1.0000000 insignificant 0.894937 0.926952 -0.00908539 5 0.79929 0.81520 -0.01591084 9.4849e-01 0.616676 insignificant 1.0000e+00 1 insignificant 9.9766e-01 0.67566 insignificant 1.0000e+00 1 insignificant -0.0596875 1.7958e-01 lowCoverage 1.0000e+00 lowCoverage 0.892768 0.894434 -0.0467450 5 0.794361 0.81804 -0.0236835 9.9747e-01 8.5119e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6376e-01 4.8695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.027774 0.60186069 lowCoverage 1.000000 lowCoverage 0.926952 0.895551 -0.039306 5 0.815201 0.82560 -0.010404 9.9074e-01 3.1748e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6726e-01 7.2684e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0874613 1.3065e-01 lowCoverage 1.0000000 lowCoverage chr11 47337381 47338381 107865 ENSG00000203453 0.920771 262 5 0.91858 143 5 0.904065 142 5 0.952434 290 5 0.926747 71 4 0.92311 377 5 0.95234 111 4 0.900267 104 5 0.725548 217 4 0.951356 174 4 0.87653 159 5 0.957912 157 4 0.904877 173 4 0.953175 73 2 0.804305 134 4 0.911429 64 4 0.675275 71 4 0.927228 450 5 0.925952 85 5 0.79296 224 5 0.933333 43 4 0.872006 130 4 0.71405 159 5 0.887010 98 4 0.851956 102 5 0.91689 177 5 0.884141 156 4 0.880263 72 4 0.957913 86 5 0.918271 181 5 0.923443 141 5 0.900262 287 5 0.6460940 116 5 0.6098327 114 5 0.812500 68 3 0.830949 99 5 0.82055 125 5 0.701658 197 5 0.91130 342 5 0.907127 332 5 0.87195 344 5 0.89999 278 4 0.910231 326 5 0.931745 0.8901717 0.902348 0.938864 0.904768 0.916260 0.955081 0.910789 0.938324 0.921274 0.931933 0.947712 0.91552 0.914703 0.877263 0.900233 0.844234 0.907971 0.927867 0.93485 0.944444 0.877083 0.866828 0.887206 0.8600457 0.8953925 0.842638 0.898482 0.9437511 0.908615 0.885775 0.892840 0.5574841 0.5318708 0.979167 0.791168 0.788670 0.5868456 0.875483 0.894094 0.869888 0.859771 0.890324 4 0.921264 0.88971 0.03435744 5 0.89765 0.868335 0.02931147 0.00034042 0.984538 weaklyHypermeth 0.34042 1 insignificant 0.024637 0.939535 weaklyHypermeth 1 1 insignificant 0.00361513 0.88641 lowCoverage 1 lowCoverage 0.921264 0.710709 0.2227364 5 0.89765 0.62294 0.2747042 3.4416e-14 0.9999997 hypermethylated 2.7150e-12 1 hypermethylated 2.0172e-04 0.999920 hypermethylated 9.5389e-03 1 hypermethylated 0.153312 9.3539e-03 lowCoverage 3.1547e-01 lowCoverage 0.922209 0.883477 0.04029539 5 0.92263 0.89548 0.02715083 8.2089e-04 7.4102e-01 weaklyHypermeth 5.4872e-02 1.0000e+00 weaklyHypermeth 2.3563e-02 5.3733e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.0098763 6.0983e-01 lowCoverage 1.0000000 lowCoverage 0.889706 0.710709 0.18447082 5 0.86834 0.62294 0.24539269 1.3791e-07 0.994383 weaklyHypermeth 7.2582e-06 1 weaklyHypermeth 1.6739e-03 0.99947 weaklyHypermeth 5.5116e-02 1 weaklyHypermeth 0.1496971 1.0580e-02 lowCoverage 3.5268e-01 lowCoverage 0.890049 0.883477 0.0077142 5 0.892002 0.89548 -0.0034775 1.7859e-01 1.8171e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9868e-01 3.2836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.013491 0.49542907 lowCoverage 1.000000 lowCoverage 0.711699 0.883477 -0.176573 5 0.747531 0.89548 -0.147949 9.9985e-01 8.0436e-04 weaklyHypometh 1.0000e+00 2.7737e-02 weaklyHypometh 9.9852e-01 2.8524e-02 weaklyHypometh 1.0000e+00 8.6436e-01 insignificant -0.1631885 8.6142e-03 lowCoverage 0.4078007 lowCoverage chr11 47370911 47371911 107868 SPI1 ENSG00000066336 0.956608 139 4 0.87337 103 6 0.871087 149 7 0.979327 225 6 0.909184 88 6 0.80876 314 7 0.69772 88 6 0.758083 132 6 0.891508 92 7 0.937664 170 6 0.92208 253 7 0.985577 66 3 0.832131 176 6 0.952431 103 6 0.916268 155 6 1.000000 41 2 0.666667 15 2 0.960593 215 6 0.934694 171 6 0.91469 205 7 0.826274 69 2 0.828332 104 6 0.81508 86 5 0.686041 90 5 0.986616 72 3 0.91767 143 7 0.744976 189 6 0.774645 63 6 0.883409 159 6 0.917202 172 7 0.901690 143 7 0.889618 261 7 0.8749905 138 6 0.6649689 112 3 0.846561 293 7 0.857143 33 2 0.70500 95 6 0.746856 153 6 0.92271 108 3 0.992308 138 6 0.83202 153 3 0.95682 121 3 0.945440 124 6 0.912885 0.9420574 0.906074 0.949281 0.944766 0.895228 0.941346 0.912868 0.930800 0.932033 0.941029 0.967105 0.91838 0.964287 0.899875 0.990479 0.788050 0.939489 0.903037 0.89211 0.865250 0.944401 0.957030 0.759168 0.9787879 0.9586575 0.830766 0.884432 0.8625785 0.891920 0.889405 0.862404 0.8611988 0.6625049 0.934773 1.000000 0.870567 0.8529774 0.911791 0.975709 0.955849 0.920143 0.920479 3 0.921724 0.88846 0.03059731 6 0.82836 0.792475 0.03588318 0.02331064 0.993475 weaklyHypermeth 1.00000 1 insignificant 0.125280 0.956756 insignificant 1 1 insignificant 0.04079264 0.21538 insignificant 1 insignificant 0.921724 0.842233 0.0777020 6 0.82836 0.71094 0.1174157 2.2030e-04 0.9002777 weaklyHypermeth 5.7973e-03 1 weaklyHypermeth 6.1436e-02 0.909606 insignificant 1.0000e+00 1 insignificant 0.105835 3.3093e-02 weaklyHypermeth 9.4553e-01 insignificant 0.925532 0.936335 -0.01459995 3 0.83419 0.82330 0.01089243 9.7987e-01 2.3868e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2083e-01 9.6632e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0414384 2.5256e-01 lowCoverage 1.0000000 lowCoverage 0.888459 0.842233 0.04533715 6 0.79247 0.71094 0.08153249 3.9880e-02 0.602812 weaklyHypermeth 6.3302e-01 1 insignificant 2.6389e-01 0.81373 insignificant 1.0000e+00 1 insignificant 0.0650428 1.6833e-01 insignificant 1.0000e+00 insignificant 0.892236 0.936335 -0.0528636 3 0.792904 0.82330 -0.0303989 9.9796e-01 5.5102e-03 lowCoverage 1.0000e+00 6.7735e-01 lowCoverage 9.9708e-01 2.3082e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.082231 0.04566900 lowCoverage 1.000000 lowCoverage 0.842627 0.936335 -0.082287 3 0.694859 0.82330 -0.128444 9.9805e-01 3.0262e-02 lowCoverage 1.0000e+00 6.4387e-01 lowCoverage 9.9808e-01 4.9339e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1472738 1.0184e-02 lowCoverage 0.4403795 lowCoverage chr11 47373267 47374267 107870 SPI1 ENSG00000066336 0.830644 654 20 0.74991 670 21 0.799907 700 21 0.874061 753 17 0.834814 450 18 0.82543 848 20 0.85383 618 18 0.781996 515 21 0.792951 515 19 0.818981 447 18 0.87777 833 21 0.781227 474 15 0.859706 452 19 0.864666 242 9 0.840158 543 18 0.753671 365 15 0.722114 561 11 0.829146 818 18 0.846711 683 19 0.85175 778 20 0.763629 315 20 0.846381 409 16 0.81486 631 21 0.713757 379 18 0.862835 376 17 0.83257 755 21 0.742625 668 20 0.593989 366 17 0.849882 488 20 0.830918 738 21 0.843394 760 20 0.823415 835 21 0.8182733 528 21 0.7755952 517 20 0.917321 706 13 0.741068 183 14 0.72596 620 19 0.823231 690 21 0.78404 681 18 0.858780 713 20 0.82769 511 16 0.83079 507 15 0.820266 622 18 0.879037 0.8040190 0.876887 0.911844 0.898014 0.864141 0.854791 0.854490 0.828187 0.885772 0.901958 0.872878 0.90010 0.903500 0.867462 0.839994 0.847332 0.876503 0.896795 0.89388 0.835426 0.872241 0.872483 0.798873 0.9121763 0.9069795 0.814428 0.795526 0.8776031 0.922996 0.891216 0.894880 0.8970358 0.7200496 0.881056 0.758851 0.811846 0.8808640 0.854070 0.907138 0.857481 0.865799 0.883151 11 0.871634 0.84881 0.01015680 21 0.78217 0.735209 0.04696407 0.55030425 0.863437 insignificant 1.00000 1 insignificant 0.534200 0.764822 insignificant 1 1 insignificant 0.02628461 0.30194 insignificant 1 insignificant 0.871634 0.808819 0.0449851 20 0.78217 0.75875 0.0234241 1.1551e-05 0.6798220 weaklyHypermeth 3.5002e-04 1 weaklyHypermeth 4.8297e-01 0.328352 insignificant 1.0000e+00 1 insignificant 0.019229 5.4486e-01 insignificant 1.0000e+00 insignificant 0.871696 0.894529 -0.00161787 18 0.80783 0.79928 0.00854813 5.8833e-01 1.3489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0397e-01 1.7358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048409 7.6102e-01 insignificant 1.0000000 insignificant 0.848810 0.808819 0.03002325 20 0.73521 0.75875 -0.02353999 7.3443e-03 0.492464 weaklyHypermeth 1.2448e-01 1 insignificant 6.0435e-01 0.26124 insignificant 1.0000e+00 1 insignificant -0.0070554 8.4922e-01 insignificant 1.0000e+00 insignificant 0.849442 0.894529 -0.0057762 18 0.802046 0.79928 0.0027691 8.7679e-01 3.6354e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6558e-01 3.0629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.031125 0.24222240 insignificant 1.000000 insignificant 0.809259 0.894529 -0.051094 17 0.782272 0.79928 -0.017005 8.7560e-01 3.6667e-02 weaklyHypometh 1.0000e+00 7.4832e-01 insignificant 8.7810e-01 3.3681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0240701 4.6166e-01 insignificant 1.0000000 insignificant chr11 47653892 47654892 107890 MTCH2 ENSG00000109919 0.568130 235 10 0.56375 323 10 0.546497 272 10 0.455855 180 10 0.546026 114 5 0.50529 321 10 0.39989 258 10 0.620627 279 10 0.535197 206 10 0.531207 154 10 0.50787 393 10 0.567202 156 5 0.582020 267 10 0.539310 63 6 0.506380 170 10 0.287976 126 5 0.555773 129 5 0.597276 199 8 0.577192 244 10 0.66245 340 10 0.606902 130 5 0.403623 70 3 0.47936 151 10 0.606630 144 8 0.611111 59 8 0.58888 311 10 0.536086 142 5 0.620221 79 5 0.560746 176 10 0.574219 373 10 0.509430 350 10 0.539892 404 10 0.4619353 224 10 0.4048873 232 10 0.585812 243 10 0.374074 27 3 0.51670 171 10 0.498119 282 10 0.57922 199 10 0.547502 267 10 0.33413 173 8 0.50001 155 10 0.505470 155 8 0.515386 0.5699614 0.539257 0.511443 0.554580 0.568946 0.516060 0.617470 0.508453 0.592681 0.600107 0.569735 0.62338 0.564514 0.604652 0.522922 0.504504 0.507101 0.650666 0.66544 0.715158 0.385809 0.553055 0.566132 0.5071232 0.6247643 0.578920 0.727243 0.5377275 0.660258 0.521492 0.525802 0.5084490 0.4670633 0.569894 0.484257 0.607704 0.5856773 0.614086 0.527566 0.431339 0.521234 0.505353 3 0.573944 0.58309 -0.00486635 10 0.60344 0.544133 0.05930563 0.86546528 0.689237 insignificant 1.00000 1 insignificant 0.824749 0.425644 insignificant 1 1 insignificant -0.02029645 0.43933 insignificant 1 insignificant 0.574145 0.533503 0.0483149 10 0.55114 0.49831 0.0528310 2.8865e-03 0.9910882 weaklyHypermeth 5.6598e-02 1 weaklyHypermeth 4.4201e-02 0.995273 weaklyHypermeth 9.1304e-01 1 insignificant 0.059208 1.3906e-01 insignificant 1.0000e+00 insignificant 0.574434 0.539515 0.03793797 10 0.62595 0.43114 0.19480467 5.3152e-02 8.3117e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0528e-02 7.1105e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0395270 4.2582e-01 insignificant 1.0000000 insignificant 0.583438 0.533503 0.05436984 10 0.55737 0.49831 0.05906706 1.9046e-04 0.992910 weaklyHypermeth 5.2905e-03 1 weaklyHypermeth 8.1355e-03 0.99857 weaklyHypermeth 1.9843e-01 1 insignificant 0.0795044 5.9212e-02 insignificant 1.0000e+00 insignificant 0.583648 0.539515 0.0403093 10 0.568644 0.43114 0.1375013 1.4031e-01 8.9288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4929e-01 9.4041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.059823 0.24637171 insignificant 1.000000 insignificant 0.533503 0.540655 -0.010631 10 0.498306 0.51737 -0.019065 4.4402e-01 5.1213e-02 insignificant 1.0000e+00 9.1452e-01 insignificant 7.8974e-01 7.8736e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0196809 7.1924e-01 insignificant 1.0000000 insignificant chr11 48058948 48059948 107903 PTPRJ ENSG00000149177 0.859920 386 12 0.84089 595 14 0.763641 176 12 0.927428 187 9 0.969697 89 5 0.90443 644 12 0.74242 163 7 0.928251 250 9 0.763237 157 12 0.922314 106 8 0.86930 499 11 0.933333 20 3 0.914079 298 9 0.864583 54 4 0.793090 184 9 0.666667 10 0 0.566667 18 0 0.818304 321 9 0.920139 331 9 0.86768 391 11 0.906640 93 7 0.599704 104 6 0.87801 172 9 0.952479 84 7 0.951695 194 11 0.90017 537 11 0.751170 168 11 0.863381 54 3 0.887352 422 14 0.926910 654 11 0.907805 589 11 0.924688 445 11 0.2503268 367 11 0.1502896 314 9 0.200000 264 10 0.000000 162 8 0.16799 262 11 0.277030 611 11 0.73296 420 14 0.698819 465 12 0.66688 319 14 0.72532 342 12 0.689080 284 9 0.854261 0.8703981 0.826675 0.945784 0.969136 0.874961 0.788409 0.938323 0.796546 0.878544 0.889566 0.875289 0.93896 0.934960 0.838745 0.822777 0.800669 0.868995 0.921200 0.86735 0.908287 0.815292 0.851827 0.968575 0.9589700 0.9248416 0.830109 0.942070 0.8843024 0.935076 0.932974 0.897390 0.5132736 0.3093412 0.392073 0.425477 0.385574 0.5510057 0.776782 0.782030 0.780521 0.794960 0.768252 3 0.881665 0.90159 -0.02042468 9 0.86951 0.883371 -0.01385926 0.98745311 0.135084 insignificant 1.00000 1 insignificant 0.914189 0.309689 insignificant 1 1 insignificant -0.02902990 0.43804 insignificant 1 insignificant 0.883680 0.243434 0.5075958 9 0.80125 0.19621 0.6050392 9.2779e-94 1.0000000 hypermethylated 9.2779e-91 1 hypermethylated 3.7174e-20 1.000000 hypermethylated 3.7174e-17 1 hypermethylated 0.667531 2.7220e-07 hypermethylated 5.4440e-05 hypermethylated 0.881665 0.765574 0.11117602 12 0.86951 0.69879 0.17072591 5.1484e-19 9.4206e-01 weaklyHypermeth 1.7161e-16 1.0000e+00 weaklyHypermeth 1.0953e-07 9.9699e-01 weaklyHypermeth 1.8254e-05 1.0000e+00 weaklyHypermeth 0.1391938 1.7283e-05 weaklyHypermeth 0.0086415 weaklyHypermeth 0.903131 0.243557 0.59007783 11 0.89348 0.21405 0.67943197 2.8542e-82 1.000000 hypermethylated 2.8542e-79 1 hypermethylated 5.6684e-19 1.00000 hypermethylated 5.6684e-16 1 hypermethylated 0.6965606 4.3889e-08 hypermethylated 1.4630e-05 hypermethylated 0.901593 0.765574 0.1405861 9 0.883371 0.69879 0.1845852 1.3955e-18 9.8924e-01 weaklyHypermeth 4.6518e-16 1.0000e+00 weaklyHypermeth 1.5933e-07 9.9900e-01 weaklyHypermeth 5.3111e-05 1.0000e+00 weaklyHypermeth 0.168224 0.00010157 weaklyHypermeth 0.050785 weaklyHypermeth 0.243557 0.758457 -0.398435 9 0.214048 0.67235 -0.458302 1.0000e+00 1.9379e-31 hypomethylated 1.0000e+00 1.9379e-28 hypomethylated 1.0000e+00 9.2468e-13 hypomethylated 1.0000e+00 4.6234e-10 hypomethylated -0.5283368 1.7189e-05 hypomethylated 0.0042973 hypomethylated chr11 55538694 55539694 107963 OR5F1 ENSG00000149133 0.928551 609 5 0.94574 168 5 0.779274 133 5 0.950615 466 5 0.895714 43 5 0.92130 512 5 0.95631 142 5 0.902038 134 5 0.901625 105 4 0.962251 106 4 0.94570 280 5 0.969231 48 4 0.880343 114 4 1.000000 2 0 0.943317 123 5 0.957778 76 4 0.926380 385 5 0.915987 453 5 0.925719 163 5 0.94927 472 5 0.733333 40 4 0.806618 130 4 0.96410 248 5 0.945711 115 5 0.934107 97 5 0.95342 190 5 0.923148 89 4 0.985714 64 4 0.817890 122 5 0.956930 195 5 0.852357 218 5 0.952295 576 5 0.5099845 249 5 0.5825397 141 5 0.745909 667 5 0.759816 116 5 0.63759 155 5 0.752144 252 5 0.93181 781 5 0.949105 489 5 0.94169 673 5 0.91704 438 5 0.918452 683 5 0.932400 0.9348899 0.791557 0.955150 0.919298 0.914105 0.946935 0.901499 0.886997 0.961421 0.954811 0.964372 0.88796 0.940968 0.930185 0.952671 0.916628 0.913880 0.931721 0.94303 0.908382 0.810018 0.954753 0.932397 0.9171329 0.9426777 0.900211 0.984712 0.7841475 0.952778 0.834439 0.942483 0.4631948 0.4906433 0.673383 0.724597 0.614210 0.7159355 0.928893 0.944184 0.943864 0.909104 0.914329 4 0.931187 0.92175 0.00821917 5 0.92911 0.923722 0.00538616 0.38630857 0.637521 insignificant 1.00000 1 insignificant 0.561710 0.494335 insignificant 1 1 insignificant 0.02572230 0.32071 lowCoverage 1 lowCoverage 0.931187 0.665823 0.2517394 5 0.92911 0.68971 0.2393989 1.7973e-22 0.9999969 hypermethylated 2.9955e-20 1 hypermethylated 4.1511e-09 0.999189 hypermethylated 9.6483e-07 1 hypermethylated 0.263194 1.2660e-03 lowCoverage 6.9041e-02 lowCoverage 0.931187 0.929830 0.00119531 5 0.92911 0.92987 -0.00075798 6.4576e-01 7.0462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1525e-01 7.1766e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0037616 7.5462e-01 lowCoverage 1.0000000 lowCoverage 0.921747 0.665823 0.24939458 5 0.92372 0.68971 0.23401279 5.0149e-13 0.999999 hypermethylated 6.6289e-11 1 hypermethylated 9.1902e-07 0.99995 hypermethylated 1.1488e-04 1 hypermethylated 0.2374714 1.1956e-03 lowCoverage 8.4003e-02 lowCoverage 0.921747 0.929830 -0.0079900 5 0.923722 0.92987 -0.0061441 7.2163e-01 5.8996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8860e-01 7.9542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.029484 0.23810929 lowCoverage 1.000000 lowCoverage 0.665823 0.929830 -0.262542 5 0.689709 0.92987 -0.240157 9.9991e-01 1.4936e-08 hypomethylated 1.0000e+00 1.4936e-06 hypomethylated 9.7046e-01 1.1270e-04 hypomethylated 1.0000e+00 1.2522e-02 hypomethylated -0.2669553 1.3830e-03 weaklyHypometh 0.1152478 insignificant chr11 56834861 56835861 107996 APLNR ENSG00000134817 0.047851 656 17 0.10674 821 18 0.112136 1048 18 0.054343 590 16 0.064003 626 17 0.13959 837 19 0.15968 831 17 0.077230 747 17 0.074351 1115 17 0.063902 994 17 0.07953 664 17 0.044300 1038 17 0.040165 798 17 0.046875 448 13 0.097262 986 17 0.030419 1013 17 0.036555 639 11 0.067542 699 15 0.012473 571 17 0.16230 718 19 0.098804 288 17 0.168398 482 16 0.14485 528 18 0.063211 457 18 0.025988 405 14 0.05097 859 18 0.089328 865 18 0.089732 574 17 0.014724 600 17 0.039160 871 18 0.027007 767 18 0.093633 814 19 0.0027665 656 18 0.0020624 531 17 0.000000 566 18 0.052632 257 12 0.11781 304 18 0.054503 748 18 0.17438 842 18 0.150606 696 17 0.14960 635 16 0.13507 595 16 0.053543 520 17 0.024711 0.0099108 0.032440 0.023320 0.014269 0.050458 0.022901 0.017576 0.013284 0.016702 0.026791 0.021884 0.02425 0.041486 0.018211 0.017061 0.015100 0.026296 0.014363 0.02424 0.049933 0.082355 0.047426 0.022456 0.0088478 0.0069495 0.022108 0.010722 0.0091948 0.022101 0.012545 0.018997 0.0019694 0.0026854 0.000000 0.000000 0.038002 0.0053528 0.131726 0.064798 0.079819 0.083425 0.066763 15 0.030242 0.03755 0.00088187 18 0.10551 0.079921 0.02558443 0.26207973 0.672081 insignificant 1.00000 1 insignificant 0.394084 0.961098 insignificant 1 1 insignificant 0.00037874 0.98216 insignificant 1 insignificant 0.030248 0.010777 0.0272210 18 0.11009 0.08242 0.0276727 1.8674e-09 0.9999905 weaklyHypermeth 7.8327e-08 1 weaklyHypermeth 7.1857e-09 1.000000 weaklyHypermeth 1.0265e-06 1 weaklyHypermeth 0.037567 1.1620e-01 insignificant 1.0000e+00 insignificant 0.030081 0.091849 -0.06267208 17 0.10272 0.15199 -0.04926560 8.5450e-01 2.7810e-36 weaklyHypometh 1.0000e+00 2.7810e-33 weaklyHypometh 9.6583e-01 2.5948e-15 weaklyHypometh 1.0000e+00 2.5948e-12 weaklyHypometh -0.0567785 4.8693e-02 weaklyHypometh 1.0000000 insignificant 0.037442 0.010777 0.02689514 18 0.07470 0.08242 -0.00771979 8.6115e-05 1.000000 weaklyHypermeth 2.6995e-03 1 weaklyHypermeth 7.3149e-06 0.99994 weaklyHypermeth 5.6269e-04 1 weaklyHypermeth 0.0371883 1.4360e-01 insignificant 1.0000e+00 insignificant 0.037487 0.091849 -0.0582511 17 0.081814 0.15199 -0.0701716 9.9846e-01 5.9288e-19 weaklyHypometh 1.0000e+00 5.9288e-16 weaklyHypometh 9.8347e-01 6.0912e-11 weaklyHypometh 1.0000e+00 6.0912e-08 weaklyHypometh -0.057157 0.05202018 insignificant 1.000000 insignificant 0.010134 0.091849 -0.081785 17 0.042650 0.15199 -0.109336 1.0000e+00 8.6076e-21 weaklyHypometh 1.0000e+00 2.1519e-18 weaklyHypometh 1.0000e+00 2.0681e-13 weaklyHypometh 1.0000e+00 2.0681e-10 weaklyHypometh -0.0943455 8.9716e-03 weaklyHypometh 0.4078007 insignificant chr11 56854260 56855260 107998 ENSG00000209769 0.978335 172 8 0.86751 170 8 0.859642 239 8 0.964286 50 8 0.938323 173 8 0.91278 169 8 0.95775 342 8 0.976113 137 7 0.916966 239 8 0.950080 172 8 0.93700 308 8 0.939388 277 8 0.935278 195 8 NA 0 0 0.936629 214 8 0.915416 240 8 0.914699 263 8 0.955159 92 8 0.930761 189 8 0.96152 212 8 0.901415 126 8 0.875000 8 0 0.90405 255 8 0.842312 89 8 1.000000 25 1 0.96771 144 8 0.966518 129 8 0.910899 121 8 0.939484 128 8 0.971908 238 8 0.930589 151 8 0.948588 304 8 0.9541396 146 8 0.9700486 155 8 0.801905 471 6 0.971726 59 6 0.91506 159 8 0.926168 125 8 0.98281 148 7 0.981895 138 6 0.95238 82 8 0.98401 162 6 0.966440 97 8 0.976101 0.8699329 0.878730 0.967347 0.953744 0.922196 0.963176 0.972240 0.917862 0.943072 0.938557 0.957797 0.93235 NA 0.940657 0.886614 0.905582 0.961030 0.926854 0.95798 0.916708 0.828704 0.923779 0.852567 1.0000000 0.9645578 0.963776 0.901563 0.9348882 0.971495 0.935483 0.958868 0.9392870 0.9732723 0.821417 0.969339 0.929796 0.9138035 0.983790 0.982985 0.964431 0.977445 0.956482 5 0.932520 0.93597 -0.00344834 8 0.93253 0.934632 -0.00210562 0.68503932 0.238940 insignificant 1.00000 1 insignificant 0.922506 0.313341 insignificant 1 1 insignificant 0.00421294 0.78107 insignificant 1 insignificant 0.932520 0.915695 0.0074065 8 0.93253 0.92948 0.0030468 4.6519e-01 0.3319645 insignificant 1.0000e+00 1 insignificant 8.3659e-01 0.097933 insignificant 1.0000e+00 1 insignificant 0.010911 7.0071e-01 insignificant 1.0000e+00 insignificant 0.932520 0.972887 -0.03684388 6 0.93253 0.97043 -0.03790212 9.9862e-01 4.4930e-04 weaklyHypometh 1.0000e+00 8.9860e-02 weaklyHypometh 9.9999e-01 7.7154e-05 weaklyHypometh 1.0000e+00 2.7204e-02 weaklyHypometh -0.0394225 7.9295e-04 weaklyHypometh 0.0881056 weaklyHypometh 0.935972 0.915695 0.00775583 8 0.93463 0.92948 0.00515245 2.5566e-01 0.539739 insignificant 1.0000e+00 1 insignificant 7.1822e-01 0.35885 insignificant 1.0000e+00 1 insignificant 0.0066980 8.2397e-01 insignificant 1.0000e+00 insignificant 0.935972 0.972887 -0.0338981 6 0.934632 0.97043 -0.0357965 9.7502e-01 6.0961e-03 weaklyHypometh 1.0000e+00 6.7735e-01 insignificant 9.9918e-01 1.1103e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.043635 0.00879359 weaklyHypometh 0.659495 insignificant 0.915695 0.972887 -0.029157 6 0.929480 0.97043 -0.040949 9.7253e-01 4.1070e-02 weaklyHypometh 1.0000e+00 7.9827e-01 insignificant 9.8618e-01 5.0238e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0503334 1.1260e-01 insignificant 1.0000000 insignificant chr11 57000976 57001976 108006 RTN4RL2 ENSG00000186907 0.036006 251 7 0.0506586 213 5 0.200868 274 7 0.0355167 221 5 0.036028 167 7 0.026247 381 7 0.039083 270 7 0.041737 256 7 0.037877 395 7 0.041562 377 7 0.036796 215 7 0.040436 413 7 0.050977 261 7 0.040408 198 4 0.0304497 395 7 0.016807 444 7 0.056410 109 7 0.057882 286 5 0.0158730 169 7 0.034405 346 7 0.085714 44 6 0.085434 181 7 0.029300 252 7 0.047619 101 7 0.069415 166 5 0.0361554 288 7 0.059071 168 7 0.037707 231 6 0.025019 146 7 0.046256 284 7 0.044867 241 7 0.0445481 367 7 0.4687831 165 7 0.0547619 138 7 0.6000000 127 5 0.459184 72 7 0.367347 78 6 0.4655479 129 7 0.137779 369 6 0.096208 347 5 0.0593475 301 5 0.0556116 275 5 0.1346999 302 6 0.047451 0.012901 0.200356 0.047819 0.050731 0.024390 0.042122 0.031978 0.029282 0.014895 0.030295 0.0226190 0.0481972 0.040272 0.043166 0.0040944 0.059358 0.0593615 0.003867 0.030959 0.037587 0.104920 0.039848 0.032483 0.041149 0.048262 0.050456 0.033038 0.035755 0.053026 0.0574575 0.029627 0.5593624 0.0443349 0.6155762 0.5956984 0.381410 0.415398 0.154442 0.130298 0.0790476 0.076365 0.119239 5 0.039887 0.045768 -0.00489956 7 0.047143 0.048396 -0.00125371 0.668237 0.60404505 insignificant 1 1.00000 insignificant 0.592534 7.1686e-01 insignificant 1 1.0000000 insignificant -0.0046242 0.656379 insignificant 1 insignificant 0.039887 0.3794076 -0.3388309 7 0.047143 0.379892 -0.3327498 1.0000e+00 8.3115e-22 hypomethylated 1.0000e+00 4.1557e-19 hypomethylated 1.0000e+00 5.3508e-09 hypomethylated 1.0000e+00 2.6754e-06 hypomethylated -0.3563025 5.1651e-03 weaklyHypometh 1.0541e-01 insignificant 0.039887 0.103513 -0.0745068 5 0.047143 0.103371 -0.0562285 9.8393e-01 4.1632e-07 weaklyHypometh 1.0000e+00 2.0816e-04 weaklyHypometh 9.4931e-01 2.6137e-05 weaklyHypometh 1.0000e+00 0.013068 weaklyHypometh -5.0428e-02 4.1905e-02 weaklyHypometh 1.0000e+00 insignificant 0.045768 0.3794076 -0.3343987 7 0.048396 0.379892 -0.331496 1.0000e+00 5.2296e-14 hypomethylated 1.0000e+00 2.6148e-11 hypomethylated 1.0000e+00 2.8754e-08 hypomethylated 1.0000e+00 1.4377e-05 hypomethylated -0.35167835 5.5658e-03 weaklyHypometh 1.1595e-01 insignificant 0.045768 0.103513 -0.0660390 5 0.048396 0.103371 -0.05497477 9.9036e-01 2.1680e-06 weaklyHypometh 1.0000e+00 1.0840e-03 weaklyHypometh 9.8011e-01 8.4120e-05 weaklyHypometh 1.0000e+00 0.042060 weaklyHypometh -0.0458034 5.7742e-02 insignificant 1.0000000 insignificant 0.3794076 0.103513 0.27559027 5 0.3798924 0.103371 0.2765213 7.3812e-05 9.9992e-01 hypermethylated 1.0545e-02 1.0000e+00 hypermethylated 4.5600e-04 9.9895e-01 hypermethylated 1.1400e-01 1.0000e+00 insignificant 0.30587491 9.0925e-03 weaklyHypermeth 0.1992720 insignificant chr11 57382318 57383318 108025 CTNND1 ENSG00000198561 0.935895 115 5 0.7631601 173 8 0.733796 38 4 0.9521564 83 6 0.597884 39 5 0.774179 117 5 0.755556 46 3 0.578355 47 5 0.808163 44 5 0.836735 23 3 0.752519 163 8 0.704762 25 3 0.843305 65 5 0.900353 39 5 0.8714286 28 3 0.812500 49 4 0.571429 14 2 0.767143 57 2 0.9012346 67 5 0.831533 167 5 0.977778 30 3 1.000000 1 0 0.755502 116 5 0.700036 38 3 0.750000 9 0 0.8852654 139 6 0.657143 56 5 0.840476 21 1 0.937955 55 5 0.942137 147 5 0.838743 161 5 0.9589916 197 5 0.5967536 75 6 0.5718750 67 5 0.4300699 28 2 1.000000 3 0 0.688472 78 5 0.7764372 195 6 0.915983 217 5 0.809642 160 8 0.9045637 83 5 0.9200000 31 5 0.8733803 141 8 0.842734 0.688418 0.626543 0.915631 0.965608 0.701113 0.771605 0.275854 0.909524 0.992063 0.764065 0.7354497 0.9957265 0.820547 0.783730 0.9056621 NA 0.5494408 0.783951 0.963947 0.988889 NA 0.936817 0.583854 0.565775 0.889266 0.700000 0.930556 0.883715 0.872887 0.9172069 0.975749 0.7859170 0.3050926 0.3695035 NA 0.554113 0.796750 0.915228 0.866754 0.8530686 0.977778 0.728357 0 0.839886 0.897727 -0.05170794 5 0.790026 0.871416 -0.08139079 0.993504 0.04807025 weaklyHypometh 1 1.00000 insignificant 0.951407 2.4504e-01 insignificant 1 1.0000000 insignificant -0.0690646 0.109507 lowCoverage 1 lowCoverage 0.840959 0.6569507 0.1814046 5 0.780402 0.660653 0.1197486 5.9315e-06 9.8654e-01 weaklyHypermeth 7.9565e-05 1.0000e+00 weaklyHypermeth 5.5640e-04 9.9347e-01 weaklyHypermeth 1.0759e-02 1.0000e+00 weaklyHypermeth 0.1073363 2.4802e-01 lowCoverage 1.0000e+00 lowCoverage 0.839886 0.889241 -0.0479795 5 0.790026 0.865084 -0.0750581 9.9768e-01 2.6275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6017e-01 5.5203e-01 insignificant 1.0000e+00 1.000000 insignificant -1.0011e-01 6.2531e-03 lowCoverage 2.6054e-01 lowCoverage 0.897089 0.6569507 0.2398190 5 0.842842 0.660653 0.182189 4.1457e-09 9.9746e-01 hypermethylated 8.8206e-08 1.0000e+00 hypermethylated 2.4002e-05 9.9846e-01 hypermethylated 7.5006e-04 1.0000e+00 hypermethylated 0.17640093 8.2988e-02 lowCoverage 8.5555e-01 lowCoverage 0.897727 0.889241 0.0046195 5 0.871416 0.865084 0.00633271 5.3253e-02 8.1323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5338e-01 9.3535e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0310449 4.3998e-01 lowCoverage 1.0000000 lowCoverage 0.6569507 0.888710 -0.23380453 5 0.6606530 0.845203 -0.1845502 9.9963e-01 4.6134e-05 hypomethylated 1.0000e+00 1.0790e-03 hypomethylated 9.9968e-01 5.2192e-03 weaklyHypometh 1.0000e+00 1.0037e-01 insignificant -0.20744580 4.8564e-02 lowCoverage 0.7248324 lowCoverage chr11 57668753 57669753 108029 OR9I2P ENSG00000186508 0.905113 196 5 0.9555556 41 5 0.600000 66 5 0.9731152 149 5 1.000000 11 0 0.897025 182 5 0.366667 15 0 0.854167 64 5 0.950000 30 3 1.000000 30 5 0.899564 80 5 1.000000 16 2 0.819048 54 5 NA 0 0 0.9833333 44 3 0.700000 20 0 0.900000 10 0 0.915538 153 5 0.8484127 31 3 0.925918 168 5 0.920000 36 5 0.987500 68 5 0.961667 69 5 1.000000 21 3 1.000000 62 5 0.9250000 73 5 0.868929 64 5 0.850000 14 0 0.971429 35 5 0.980000 70 5 0.940476 73 5 0.9123879 156 5 0.6150000 71 5 0.2153846 51 5 0.0000000 15 2 0.560000 20 2 0.726667 32 4 0.8746860 92 5 0.938430 194 5 0.964143 161 5 0.9135031 181 5 0.9424394 207 5 0.9709939 200 5 0.902682 0.962366 0.596774 0.976575 1.000000 0.897931 0.354839 0.842854 0.955645 1.000000 0.896459 1.0000000 0.8191244 NA 0.986559 0.7096774 0.911290 0.9118208 0.855223 0.921439 0.903226 0.989919 0.962970 1.000000 1.000000 0.917339 0.865841 0.858871 0.965438 0.982258 0.9441244 0.913123 0.6028226 0.2047146 0.2921650 0.5322581 0.750000 0.876617 0.939492 0.961864 0.9188765 0.942723 0.969340 0 0.903676 0.951417 -0.04887149 5 0.897367 0.944778 -0.04741073 0.998892 0.00949409 weaklyHypometh 1 0.68003 insignificant 0.995056 7.5946e-03 weaklyHypometh 1 0.9331354 insignificant -0.0750390 0.067952 lowCoverage 1 lowCoverage 0.903676 0.6263345 0.2755461 5 0.897367 0.591008 0.3063585 6.5680e-11 1.0000e+00 hypermethylated 1.4278e-09 1.0000e+00 hypermethylated 5.9135e-06 1.0000e+00 hypermethylated 1.9076e-04 1.0000e+00 hypermethylated 0.3694537 3.9133e-02 lowCoverage 5.3607e-01 lowCoverage 0.903676 0.946978 -0.0426135 5 0.897367 0.944640 -0.0472731 9.8835e-01 1.1159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2114e-01 5.7296e-01 insignificant 1.0000e+00 1.000000 insignificant -7.7825e-02 5.2995e-02 lowCoverage 1.0000e+00 lowCoverage 0.951417 0.6263345 0.3242361 5 0.944778 0.591008 0.353769 4.9996e-12 1.0000e+00 hypermethylated 1.7655e-10 1.0000e+00 hypermethylated 2.6112e-08 1.0000e+00 hypermethylated 1.8651e-06 1.0000e+00 hypermethylated 0.44449278 2.0871e-02 lowCoverage 3.2610e-01 lowCoverage 0.951417 0.946978 0.0053353 5 0.944778 0.944640 0.00013760 4.8274e-01 7.6134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2916e-02 9.5082e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant -0.0027864 8.7603e-01 lowCoverage 1.0000000 lowCoverage 0.6263345 0.946978 -0.31962729 5 0.5910084 0.944640 -0.3536316 1.0000e+00 1.0597e-05 hypomethylated 1.0000e+00 3.1166e-04 hypomethylated 1.0000e+00 2.8877e-05 hypomethylated 1.0000e+00 3.2086e-03 hypomethylated -0.44727918 2.0524e-02 lowCoverage 0.3665007 lowCoverage chr11 57668885 57669885 108030 OR9I2P ENSG00000186508 0.905113 196 5 0.9555556 41 5 0.600000 66 5 0.9731152 149 5 1.000000 11 0 0.897025 182 5 0.366667 15 0 0.854167 64 5 0.950000 30 3 1.000000 30 5 0.899564 80 5 1.000000 16 2 0.819048 54 5 NA 0 0 0.9833333 44 3 0.700000 20 0 0.900000 10 0 0.915538 153 5 0.8484127 31 3 0.925918 168 5 0.920000 36 5 0.987500 68 5 0.961667 69 5 1.000000 21 3 1.000000 62 5 0.9250000 73 5 0.868929 64 5 0.850000 14 0 0.971429 35 5 0.980000 70 5 0.940476 73 5 0.9123879 156 5 0.6150000 71 5 0.2153846 51 5 0.0000000 15 2 0.560000 20 2 0.726667 32 4 0.8746860 92 5 0.938430 194 5 0.964143 161 5 0.9135031 181 5 0.9424394 207 5 0.9709939 200 5 0.902682 0.962366 0.596774 0.976575 1.000000 0.897931 0.354839 0.842854 0.955645 1.000000 0.896459 1.0000000 0.8191244 NA 0.986559 0.7096774 0.911290 0.9118208 0.855223 0.921439 0.903226 0.989919 0.962970 1.000000 1.000000 0.917339 0.865841 0.858871 0.965438 0.982258 0.9441244 0.913123 0.6028226 0.2047146 0.2921650 0.5322581 0.750000 0.876617 0.939492 0.961864 0.9188765 0.942723 0.969340 0 0.903676 0.951417 -0.04887149 5 0.897367 0.944778 -0.04741073 0.998892 0.00949409 weaklyHypometh 1 0.68003 insignificant 0.995056 7.5946e-03 weaklyHypometh 1 0.9331354 insignificant -0.0750390 0.067952 lowCoverage 1 lowCoverage 0.903676 0.6263345 0.2755461 5 0.897367 0.591008 0.3063585 6.5680e-11 1.0000e+00 hypermethylated 1.4278e-09 1.0000e+00 hypermethylated 5.9135e-06 1.0000e+00 hypermethylated 1.9076e-04 1.0000e+00 hypermethylated 0.3694537 3.9133e-02 lowCoverage 5.3607e-01 lowCoverage 0.903676 0.946978 -0.0426135 5 0.897367 0.944640 -0.0472731 9.8835e-01 1.1159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2114e-01 5.7296e-01 insignificant 1.0000e+00 1.000000 insignificant -7.7825e-02 5.2995e-02 lowCoverage 1.0000e+00 lowCoverage 0.951417 0.6263345 0.3242361 5 0.944778 0.591008 0.353769 4.9996e-12 1.0000e+00 hypermethylated 1.7655e-10 1.0000e+00 hypermethylated 2.6112e-08 1.0000e+00 hypermethylated 1.8651e-06 1.0000e+00 hypermethylated 0.44449278 2.0871e-02 lowCoverage 3.2610e-01 lowCoverage 0.951417 0.946978 0.0053353 5 0.944778 0.944640 0.00013760 4.8274e-01 7.6134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2916e-02 9.5082e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant -0.0027864 8.7603e-01 lowCoverage 1.0000000 lowCoverage 0.6263345 0.946978 -0.31962729 5 0.5910084 0.944640 -0.3536316 1.0000e+00 1.0597e-05 hypomethylated 1.0000e+00 3.1166e-04 hypomethylated 1.0000e+00 2.8877e-05 hypomethylated 1.0000e+00 3.2086e-03 hypomethylated -0.44727918 2.0524e-02 lowCoverage 0.3665007 lowCoverage chr11 61058793 61059793 108052 LRRC10B ENSG00000204950 0.879385 430 9 0.7763071 401 7 0.798873 226 9 0.8339270 302 9 0.933953 196 9 0.803518 555 9 0.916470 307 9 0.906673 214 9 0.919894 246 9 0.930350 213 9 0.918008 389 9 0.818135 204 6 0.835921 263 9 0.781891 131 5 0.8973554 289 7 0.893519 93 9 0.887963 89 3 0.830507 563 9 0.9291028 332 6 0.864391 541 9 0.912357 171 9 0.853303 94 5 0.897939 252 9 0.857284 153 9 0.854056 87 9 0.8752777 297 9 0.869020 246 8 0.935598 121 9 0.930649 310 7 0.900037 377 9 0.857825 365 9 0.9130884 471 9 0.2551883 390 9 0.2549140 303 6 0.2564312 248 5 0.272727 53 6 0.188660 350 9 0.4951835 422 9 0.792805 351 6 0.689705 371 6 0.8724069 264 6 0.8802696 501 9 0.8786926 320 9 0.898778 0.832396 0.752595 0.880876 0.921046 0.888937 0.899873 0.899399 0.916925 0.927294 0.912085 0.8934738 0.8584486 0.862077 0.862281 0.8387563 0.897030 0.8393268 0.888534 0.879745 0.946647 0.870115 0.902458 0.873678 0.892418 0.873334 0.863054 0.913804 0.893729 0.885334 0.8727825 0.931836 0.1943424 0.2278801 0.4210837 0.2985157 0.196357 0.445935 0.813669 0.760297 0.8186584 0.842364 0.856137 6 0.888517 0.894361 -0.00683106 9 0.877873 0.882598 -0.00472542 0.710779 0.28644041 insignificant 1 1.00000 insignificant 0.784021 1.9569e-01 insignificant 1 1.0000000 insignificant -0.0202290 0.182533 insignificant 1 insignificant 0.888369 0.3552408 0.5326131 9 0.790086 0.294075 0.4960101 4.8995e-65 1.0000e+00 hypermethylated 2.4498e-62 1.0000e+00 hypermethylated 1.5501e-19 1.0000e+00 hypermethylated 7.7503e-17 1.0000e+00 hypermethylated 0.5806232 1.7481e-05 hypermethylated 1.4568e-03 hypermethylated 0.888517 0.836102 0.0423301 6 0.877873 0.829842 0.0480312 1.5176e-04 6.8346e-01 weaklyHypermeth 7.2264e-03 1.0000e+00 weaklyHypermeth 4.7908e-04 6.3056e-01 weaklyHypermeth 3.1939e-02 1.000000 weaklyHypermeth 4.5031e-02 3.0129e-01 insignificant 1.0000e+00 insignificant 0.894361 0.3558456 0.5448976 9 0.882598 0.326751 0.555848 8.7025e-47 1.0000e+00 hypermethylated 4.3513e-44 1.0000e+00 hypermethylated 2.2343e-18 1.0000e+00 hypermethylated 1.1171e-15 1.0000e+00 hypermethylated 0.60085216 2.1389e-05 hypermethylated 1.9445e-03 hypermethylated 0.894361 0.836102 0.0481823 6 0.882598 0.829842 0.05275661 7.6928e-04 7.6690e-01 weaklyHypermeth 2.5643e-02 1.0000e+00 weaklyHypermeth 2.7848e-04 9.1062e-01 weaklyHypermeth 1.8565e-02 1.000000 weaklyHypermeth 0.0652604 1.5461e-01 insignificant 1.0000000 insignificant 0.3556438 0.836193 -0.49266421 6 0.2940755 0.846858 -0.5527821 1.0000e+00 3.0084e-19 hypomethylated 1.0000e+00 7.5211e-17 hypomethylated 1.0000e+00 2.0759e-09 hypomethylated 1.0000e+00 1.0380e-06 hypomethylated -0.53559181 6.0629e-06 hypomethylated 0.0027977 hypomethylated chr11 61075365 61076365 108055 LRRC10B ENSG00000204950 0.890173 180 5 0.7245817 225 6 0.791580 200 6 0.9171905 261 5 0.847736 127 5 0.753992 236 6 0.822062 182 6 0.899351 175 6 0.826711 297 6 0.894200 399 5 0.864167 110 6 0.832383 224 5 0.834043 349 5 0.892432 225 5 0.9133213 362 5 0.775641 60 5 0.804948 96 5 0.911816 334 5 0.7754129 106 5 0.910419 199 5 0.843867 51 6 0.859109 102 5 0.786047 150 5 0.760317 90 6 0.914014 130 6 0.9481987 212 5 0.854623 102 5 0.773637 132 5 0.877399 155 5 0.862587 213 5 0.898377 272 6 0.8888301 254 5 0.6663310 168 5 0.6823431 174 6 0.7870707 332 5 0.817143 104 6 0.791618 118 5 0.6488415 228 6 0.918229 303 6 0.916051 271 5 0.9058497 241 5 0.8973606 270 5 0.8732025 193 5 0.888650 0.843863 0.781644 0.894090 0.899618 0.895497 0.824303 0.893945 0.890744 0.933901 0.865658 0.8547221 0.8898698 0.921638 0.894125 0.7944424 0.785062 0.8986156 0.928839 0.898385 0.877923 0.846512 0.913159 0.966773 0.935794 0.938547 0.876189 0.870822 0.857272 0.921293 0.9458588 0.864727 0.6886409 0.6339124 0.7803634 0.8570654 0.833334 0.648506 0.911320 0.903417 0.9176823 0.895250 0.901493 5 0.882678 0.897477 -0.02068053 5 0.806172 0.811495 -0.00532346 0.781407 0.07846542 insignificant 1 1.00000 insignificant 0.936451 1.2037e-02 weaklyHypometh 1 0.9934952 insignificant -0.0114759 0.593504 insignificant 1 insignificant 0.882854 0.7161922 0.1642598 5 0.857200 0.691319 0.1658812 5.1442e-12 9.1198e-01 weaklyHypermeth 1.3043e-10 1.0000e+00 weaklyHypermeth 8.2141e-04 8.7709e-01 weaklyHypermeth 1.4304e-02 1.0000e+00 weaklyHypermeth 0.1118834 1.1626e-02 weaklyHypermeth 2.1530e-01 insignificant 0.882678 0.906103 -0.0244809 5 0.806172 0.912939 -0.1067672 9.7035e-01 8.3603e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8347e-01 3.0227e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -5.8030e-02 1.1934e-03 weaklyHypometh 8.5241e-02 weaklyHypometh 0.899246 0.7161922 0.1844551 6 0.875316 0.691319 0.183997 5.8495e-08 9.9482e-01 weaklyHypermeth 1.1037e-06 1.0000e+00 weaklyHypermeth 8.5455e-04 9.9101e-01 weaklyHypermeth 1.6124e-02 1.0000e+00 weaklyHypermeth 0.12335932 7.1050e-03 weaklyHypermeth 1.3931e-01 insignificant 0.897477 0.906103 -0.0048262 5 0.811495 0.912939 -0.10144376 9.1205e-01 3.7088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9411e-01 8.1565e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0465545 2.3819e-02 weaklyHypometh 0.9663255 insignificant 0.7161922 0.906030 -0.19100062 5 0.6913190 0.898429 -0.2071096 9.9112e-01 1.3540e-04 weaklyHypometh 1.0000e+00 2.5073e-03 weaklyHypometh 9.8422e-01 4.7727e-03 weaklyHypometh 1.0000e+00 9.5454e-02 weaklyHypometh -0.16991384 1.9167e-03 weaklyHypometh 0.0784540 weaklyHypometh chr11 61098408 61099408 108063 LRRC10B ENSG00000204950 0.817863 130 5 0.7753132 144 5 0.622217 152 5 0.8834213 144 5 0.585878 85 5 0.747530 169 5 0.926838 77 5 0.602647 155 5 0.645238 121 5 0.886583 184 5 0.619728 163 5 0.890693 99 5 0.748845 198 5 0.836542 125 5 0.6122952 221 5 0.259104 64 5 0.548413 23 3 0.838889 160 5 0.7225639 165 5 0.741742 121 5 0.925414 71 5 0.565628 107 5 0.638143 96 5 0.628755 97 5 0.622024 73 5 0.9054380 132 5 0.544003 168 5 0.532230 71 5 0.814885 177 5 0.617015 246 5 0.772490 165 5 0.8182748 150 5 0.3097393 196 5 0.1656109 73 5 0.2417582 234 5 0.333333 23 2 0.422939 148 5 0.4329599 171 5 0.423196 119 5 0.481868 149 5 0.6669113 109 5 0.7371521 144 5 0.7129638 124 5 0.817499 0.791791 0.623694 0.879232 0.823692 0.897708 0.928541 0.847947 0.896336 0.878619 0.875607 0.8919929 0.8529858 0.842625 0.861740 0.3441176 0.673502 0.8508602 0.871407 0.894616 0.923445 0.577436 0.890863 0.880798 0.882527 0.908380 0.772474 0.784255 0.812824 0.865727 0.7769958 0.828671 0.3209130 0.1545322 0.3588089 0.4006452 0.436599 0.468018 0.675744 0.594122 0.6786622 0.748606 0.714007 5 0.832222 0.812621 0.01815092 5 0.585228 0.523696 0.06153232 0.472955 0.77725222 insignificant 1 1.00000 insignificant 0.844722 8.0045e-01 insignificant 1 1.0000000 insignificant 0.0169255 0.756268 lowCoverage 1 lowCoverage 0.832222 0.3562130 0.4819989 5 0.585228 0.218663 0.3665646 1.4739e-26 1.0000e+00 hypermethylated 1.6377e-24 1.0000e+00 hypermethylated 4.8876e-09 1.0000e+00 hypermethylated 3.7597e-07 1.0000e+00 hypermethylated 0.3978936 7.2732e-06 lowCoverage 7.2732e-04 lowCoverage 0.832222 0.663566 0.1684233 5 0.585228 0.416176 0.1690523 8.8282e-07 1.0000e+00 weaklyHypermeth 7.3568e-05 1.0000e+00 weaklyHypermeth 1.6276e-04 1.0000e+00 weaklyHypermeth 1.3564e-02 1.000000 weaklyHypermeth 1.1120e-01 1.7282e-01 lowCoverage 1.0000e+00 lowCoverage 0.812621 0.3562130 0.4573869 5 0.523696 0.218663 0.305032 1.1613e-16 1.0000e+00 hypermethylated 8.2948e-15 1.0000e+00 hypermethylated 1.6216e-08 1.0000e+00 hypermethylated 1.4741e-06 1.0000e+00 hypermethylated 0.38096816 1.7743e-05 lowCoverage 1.7743e-03 lowCoverage 0.812621 0.663566 0.1487101 5 0.523696 0.416176 0.10751997 1.6076e-04 1.0000e+00 weaklyHypermeth 8.0379e-03 1.0000e+00 weaklyHypermeth 3.7285e-03 1.0000e+00 weaklyHypermeth 1.6726e-01 1.000000 insignificant 0.0942735 2.4984e-01 insignificant 1.0000000 insignificant 0.3562130 0.663566 -0.31531236 5 0.2186633 0.416176 -0.1975123 1.0000e+00 9.3423e-06 hypomethylated 1.0000e+00 2.9195e-04 hypomethylated 1.0000e+00 1.4273e-03 weaklyHypometh 1.0000e+00 3.9960e-02 weaklyHypometh -0.28669465 6.8372e-03 lowCoverage 0.1847901 lowCoverage chr11 61099732 61100732 108064 LRRC10B ENSG00000204950 0.831127 336 9 0.7438483 257 8 0.772148 202 8 0.7526336 287 9 0.608224 105 8 0.802331 422 8 0.794544 154 8 0.764079 227 8 0.774454 183 8 0.658947 135 8 0.716764 285 8 0.887912 102 8 0.708255 205 8 0.578571 61 2 0.7490903 190 8 0.735268 58 6 0.749643 63 7 0.703543 243 8 0.5908897 230 8 0.704229 314 8 0.740393 141 8 0.630115 124 7 0.716969 211 8 0.658502 210 10 0.730822 89 6 0.7382599 261 9 0.824718 126 8 0.854275 165 8 0.843082 211 7 0.676208 299 8 0.677061 254 8 0.9286476 427 8 0.6130977 228 10 0.4741154 152 7 0.2650000 156 6 0.672195 115 9 0.721763 199 8 0.4947464 269 9 0.534007 351 9 0.816457 375 9 0.6316043 298 8 0.6501312 418 9 0.5824799 338 10 0.778307 0.663370 0.749475 0.693963 0.725657 0.808198 0.760127 0.805931 0.739758 0.718631 0.816314 0.8340341 0.6668118 0.727271 0.700379 0.7145618 0.690952 0.6968854 0.709082 0.722670 0.766058 0.615675 0.803690 0.817367 0.753211 0.688244 0.788425 0.806013 0.751343 0.707393 0.6740979 0.887763 0.6199063 0.4829413 0.4952096 0.6846096 0.632746 0.630286 0.616280 0.691134 0.6442803 0.709089 0.626535 7 0.730390 0.732697 -0.01802014 8 0.726413 0.772306 -0.04589354 0.924762 0.12743078 insignificant 1 1.00000 insignificant 0.981199 1.3549e-01 insignificant 1 1.0000000 insignificant -0.0202626 0.529100 insignificant 1 insignificant 0.730390 0.5371531 0.1922782 8 0.726413 0.568496 0.1579166 7.9607e-16 7.1998e-01 weaklyHypermeth 2.9484e-14 1.0000e+00 weaklyHypermeth 2.2545e-06 7.4649e-01 weaklyHypermeth 9.1991e-05 1.0000e+00 weaklyHypermeth 0.1911721 3.6122e-02 weaklyHypermeth 5.0876e-01 insignificant 0.730390 0.672666 0.0879290 8 0.726413 0.637914 0.0884990 1.1985e-05 9.9087e-01 weaklyHypermeth 6.3079e-04 1.0000e+00 weaklyHypermeth 6.5204e-04 9.9904e-01 weaklyHypermeth 4.0752e-02 1.000000 weaklyHypermeth 8.8389e-02 1.4189e-01 insignificant 1.0000e+00 insignificant 0.731533 0.5361930 0.2069629 8 0.661977 0.487282 0.174694 8.3242e-10 9.9535e-01 hypermethylated 1.9819e-08 1.0000e+00 hypermethylated 2.0516e-05 9.9871e-01 hypermethylated 7.0746e-04 1.0000e+00 hypermethylated 0.21143467 2.4481e-02 weaklyHypermeth 3.6539e-01 insignificant 0.732697 0.672666 0.1081899 8 0.772306 0.637914 0.13439250 3.6087e-05 9.9997e-01 weaklyHypermeth 2.0048e-03 1.0000e+00 weaklyHypermeth 6.2342e-04 9.9998e-01 weaklyHypermeth 3.2812e-02 1.000000 weaklyHypermeth 0.1086519 8.9790e-02 insignificant 1.0000000 insignificant 0.5371531 0.672666 -0.10605175 8 0.5684962 0.637914 -0.0694177 3.1047e-01 1.1212e-02 weaklyHypometh 1.0000e+00 1.4193e-01 insignificant 5.2883e-01 4.0056e-02 weaklyHypometh 1.0000e+00 5.4871e-01 insignificant -0.10278279 2.4836e-01 insignificant 1.0000000 insignificant chr11 61219720 61220720 108069 DAGLA ENSG00000134780 0.796166 79 5 0.5069708 207 8 0.682751 173 7 0.4975128 114 5 0.628659 134 7 0.827314 119 6 0.535290 167 9 0.503362 144 6 0.567902 153 6 0.763947 110 4 0.636043 202 9 0.777685 111 5 0.441585 160 6 0.788235 46 4 0.4228829 144 6 0.852018 84 3 0.583545 85 3 0.413946 87 5 0.4536433 172 8 0.481934 96 6 0.861628 102 8 0.659722 64 5 0.590112 105 6 0.548761 151 6 0.589028 85 4 0.4772051 221 8 0.511535 161 6 0.540739 108 6 0.622837 170 8 0.591088 254 8 0.541928 186 8 0.6245439 122 8 0.3481220 197 8 0.1908685 120 6 0.5686813 136 4 0.372294 48 3 0.243343 133 7 0.3123398 192 8 0.695311 98 7 0.591429 111 6 0.6511853 79 4 0.7104329 83 3 0.7417037 89 6 0.833700 0.530163 0.677728 0.686054 0.521803 0.778725 0.602929 0.572570 0.738345 0.683595 0.646805 0.7044314 0.4347492 0.734290 0.532806 0.7427598 0.568077 0.6961262 0.465326 0.543693 0.677940 0.657736 0.731228 0.476175 0.571421 0.586524 0.574143 0.742578 0.681274 0.498013 0.5810663 0.728110 0.4951728 0.0706452 0.7601737 0.2256272 0.297365 0.570774 0.619877 0.644468 0.6543058 0.706535 0.560932 2 0.648701 0.626163 -0.00209754 7 0.640204 0.660718 -0.02051404 0.881134 0.77414105 insignificant 1 1.00000 insignificant 0.899857 8.6214e-01 insignificant 1 1.0000000 insignificant 0.0114756 0.793885 insignificant 1 insignificant 0.647332 0.3232078 0.2997241 7 0.556638 0.219803 0.3368349 5.8419e-13 9.9996e-01 hypermethylated 1.7703e-11 1.0000e+00 hypermethylated 3.2413e-05 9.9939e-01 hypermethylated 7.9055e-04 1.0000e+00 hypermethylated 0.2687947 1.9597e-03 weaklyHypermeth 5.7237e-02 weaklyHypermeth 0.646809 0.666667 -0.0597621 3 0.466428 0.719776 -0.2533478 9.9999e-01 6.2131e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9896e-01 2.0372e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -6.9943e-02 1.1459e-01 insignificant 1.0000e+00 insignificant 0.626527 0.3259804 0.2821800 8 0.705559 0.249110 0.456448 1.8128e-10 9.9924e-01 hypermethylated 5.3317e-09 1.0000e+00 hypermethylated 6.8191e-05 9.8618e-01 hypermethylated 1.8942e-03 1.0000e+00 hypermethylated 0.25731909 2.8556e-03 weaklyHypermeth 6.7990e-02 weaklyHypermeth 0.625728 0.666667 -0.0709597 4 0.604171 0.737479 -0.13330849 9.9930e-01 1.2896e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8239e-01 2.6178e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0814184 5.4972e-02 insignificant 1.0000000 insignificant 0.3239951 0.665208 -0.33513190 4 0.2491104 0.701094 -0.4519839 1.0000e+00 4.3655e-09 lowCoverage 1.0000e+00 5.4569e-07 lowCoverage 9.9950e-01 5.0747e-04 lowCoverage 1.0000e+00 1.9676e-02 lowCoverage -0.33873749 6.8332e-04 hypomethylated 0.0457062 hypomethylated chr11 61250275 61251275 108073 DAGLA ENSG00000134780 0.822706 292 9 0.8490216 237 9 0.746180 144 9 0.8147932 273 9 0.560556 60 7 0.765290 371 10 0.775442 137 7 0.786331 236 10 0.739247 117 7 0.877093 126 9 0.853596 322 9 0.823810 41 3 0.871004 217 6 0.921670 93 3 0.8545382 115 6 0.583333 45 3 0.535354 35 2 0.691099 480 9 0.8457988 291 7 0.815788 340 7 0.734567 150 5 0.782910 84 7 0.830143 202 10 0.669342 103 9 0.893692 191 8 0.8903202 283 9 0.754328 263 10 0.830640 85 7 0.881755 241 7 0.893302 287 9 0.886653 287 9 0.7164514 284 10 0.8795631 169 9 0.8040893 315 9 0.8007344 217 6 0.800858 59 3 0.713547 161 10 0.8804804 319 9 0.774652 150 9 0.822105 292 9 0.7847574 206 9 0.7145271 199 6 0.8552413 179 9 0.785121 0.839860 0.684461 0.848775 0.668882 0.829648 0.728937 0.803528 0.574981 0.783575 0.809875 0.7282126 0.7918989 0.886455 0.736304 0.5558352 0.629645 0.8158276 0.823739 0.815664 0.691944 0.740759 0.760723 0.673907 0.886897 0.896590 0.684705 0.814820 0.819292 0.889461 0.9235981 0.786205 0.8376202 0.6977258 0.8845849 0.8244767 0.826913 0.863054 0.754331 0.854111 0.8706326 0.720235 0.848572 3 0.806549 0.823290 -0.03254870 9 0.783073 0.829552 -0.04647874 0.854295 0.00725738 weaklyHypometh 1 0.68003 insignificant 0.678229 2.4450e-03 weaklyHypometh 1 0.6112416 insignificant -0.0370429 0.276421 insignificant 1 insignificant 0.806549 0.8439774 -0.0360020 9 0.783073 0.793740 -0.0106671 2.4417e-01 2.6515e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.8259e-01 1.5439e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0365796 3.1250e-01 insignificant 1.0000e+00 insignificant 0.806549 0.853801 -0.0409648 9 0.783073 0.817502 -0.0344296 5.2743e-01 2.4807e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.4937e-01 1.3152e-01 insignificant 1.0000e+00 1.000000 insignificant -1.3624e-02 6.9354e-01 insignificant 1.0000e+00 insignificant 0.823099 0.8419355 -0.0089860 9 0.815978 0.727595 0.088383 2.0575e-01 4.1359e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5326e-01 3.8623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00046333 9.8942e-01 insignificant 1.0000e+00 insignificant 0.823290 0.853801 -0.0059955 9 0.829552 0.817502 0.01204917 5.7819e-01 8.7385e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6153e-01 9.3746e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0234186 4.9307e-01 insignificant 1.0000000 insignificant 0.8439774 0.853801 0.00054698 9 0.7937399 0.817502 -0.0237624 1.9526e-01 5.7392e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2789e-01 6.8673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02295532 5.2487e-01 insignificant 1.0000000 insignificant chr11 61284699 61285699 108075 ENSG00000124915 0.922222 54 3 0.6493506 72 6 0.781526 119 6 0.8971306 48 3 0.663149 76 6 0.854815 90 6 0.746429 44 7 0.856061 99 6 0.654187 121 6 0.757132 114 6 0.733586 188 6 0.602041 28 3 0.697386 104 6 0.864107 77 6 0.7703275 88 6 0.564706 53 3 0.000000 2 0 0.824074 36 3 0.6050020 141 6 0.792749 72 3 0.791071 86 6 0.886905 56 4 0.958252 96 6 0.863333 87 3 0.934524 34 3 0.6978193 165 6 0.676814 193 6 0.689796 52 6 0.801454 118 6 0.600597 115 6 0.540909 95 6 0.8937045 139 6 0.2861770 140 6 0.3381345 161 6 0.4848485 33 3 0.000000 5 0 0.235999 54 5 0.3653535 240 6 0.642857 36 3 0.629670 77 6 0.7986111 33 3 0.6458333 36 3 0.6936508 59 6 0.909259 0.645623 0.763632 0.879986 0.779604 0.858395 0.870139 0.852273 0.768199 0.886096 0.859523 0.7361111 0.6839879 0.855347 0.891094 0.7052454 NA 0.8271605 0.693845 0.795244 0.771181 0.881944 0.958238 0.858333 0.929398 0.800096 0.788539 0.805556 0.803548 0.798151 0.6256313 0.892583 0.2523697 0.3619480 0.2844643 0.2184452 0.299518 0.388591 0.541667 0.718162 0.7835648 0.628472 0.664815 0 0.790898 0.810877 -0.01052880 6 0.696347 0.722512 -0.02616573 0.763022 0.35640970 insignificant 1 1.00000 insignificant 0.875342 2.2491e-01 insignificant 1 1.0000000 insignificant -0.0661325 0.270662 lowCoverage 1 lowCoverage 0.790898 0.3069620 0.5116940 6 0.696347 0.311862 0.3844848 2.3317e-29 9.9991e-01 hypermethylated 4.6634e-27 1.0000e+00 hypermethylated 1.0482e-09 1.0000e+00 hypermethylated 1.0482e-07 1.0000e+00 hypermethylated 0.4267135 3.4316e-04 lowCoverage 1.5598e-02 lowCoverage 0.790898 0.651452 0.1462504 6 0.696347 0.667322 0.0290244 2.2007e-06 1.1283e-01 weaklyHypermeth 1.5715e-04 1.0000e+00 weaklyHypermeth 7.8102e-04 1.1606e-01 weaklyHypermeth 4.3390e-02 1.000000 weaklyHypermeth 2.9674e-02 5.8797e-01 lowCoverage 1.0000e+00 lowCoverage 0.809061 0.3064771 0.4998549 6 0.663448 0.272879 0.390569 2.6020e-22 9.9911e-01 hypermethylated 4.3366e-20 1.0000e+00 hypermethylated 1.0570e-09 1.0000e+00 hypermethylated 1.1794e-07 1.0000e+00 hypermethylated 0.49284602 1.5639e-04 lowCoverage 8.8752e-03 lowCoverage 0.810877 0.651452 0.1564534 6 0.722512 0.667322 0.05519015 7.9294e-07 3.0042e-01 weaklyHypermeth 5.6639e-05 1.0000e+00 weaklyHypermeth 4.7418e-04 2.6366e-01 weaklyHypermeth 2.7893e-02 1.000000 weaklyHypermeth 0.0958070 7.5966e-02 lowCoverage 1.0000000 lowCoverage 0.3069620 0.651452 -0.34622919 6 0.3118618 0.667322 -0.3554604 1.0000e+00 3.3229e-08 hypomethylated 1.0000e+00 3.3229e-06 hypomethylated 1.0000e+00 5.7330e-06 hypomethylated 1.0000e+00 9.5551e-04 hypomethylated -0.39703906 1.0009e-03 lowCoverage 0.0526210 lowCoverage chr11 61287730 61288730 108076 ENSG00000124915 0.785758 343 8 0.6907167 97 10 0.735840 121 9 0.8340293 246 8 0.888889 43 4 0.658359 280 8 0.610935 63 8 0.837016 135 8 0.818597 80 7 0.733333 108 6 0.916022 195 8 0.793651 41 2 0.869626 113 8 0.833252 98 6 0.7398392 122 8 0.812500 63 4 NA 0 0 0.880571 424 8 0.8268832 220 8 0.727880 197 10 0.598765 50 5 0.881534 57 5 0.853044 199 10 0.773835 81 7 0.709877 84 6 0.8588350 155 10 0.629314 119 7 0.615152 40 4 0.715681 120 6 0.881288 111 8 0.904960 119 10 0.8360586 303 9 0.4469467 188 10 0.3037561 297 8 0.5708135 399 8 0.673611 47 6 0.442012 78 8 0.5763075 235 10 0.697870 215 6 0.681747 213 8 0.8141424 178 8 0.6465423 321 6 0.8533911 182 8 0.778424 0.733250 0.703627 0.805158 0.808989 0.838408 0.686481 0.841770 0.829432 0.889139 0.919295 0.7267255 0.9139409 0.839647 0.838902 0.9853580 NA 0.8761906 0.834720 0.853113 0.505618 0.880146 0.882710 0.876457 0.796504 0.883162 0.754078 0.860112 0.773555 0.916957 0.9256733 0.888691 0.4903779 0.2014466 0.5108210 0.5965777 0.546814 0.629212 0.870000 0.661090 0.7762387 0.689036 0.859345 3 0.830264 0.835188 -0.01113245 8 0.709444 0.676632 0.03281226 0.901028 0.53266815 insignificant 1 1.00000 insignificant 0.840753 6.4733e-01 insignificant 1 1.0000000 insignificant 0.0176132 0.646607 insignificant 1 insignificant 0.830594 0.4895498 0.3473045 8 0.706250 0.439303 0.2669472 4.2613e-26 9.9998e-01 hypermethylated 3.8739e-24 1.0000e+00 hypermethylated 3.2915e-07 9.9989e-01 hypermethylated 1.8286e-05 1.0000e+00 hypermethylated 0.2869008 2.0033e-03 weaklyHypermeth 5.7237e-02 weaklyHypermeth 0.830594 0.774368 0.0671224 8 0.706250 0.746881 -0.0406311 7.2592e-03 9.0569e-01 weaklyHypermeth 2.1998e-01 1.0000e+00 insignificant 1.3533e-01 9.2499e-01 insignificant 1.0000e+00 1.000000 insignificant 5.0403e-02 2.9977e-01 insignificant 1.0000e+00 insignificant 0.836478 0.4895498 0.3692283 8 0.720790 0.439303 0.281487 1.7347e-18 1.0000e+00 hypermethylated 1.5770e-16 1.0000e+00 hypermethylated 1.3209e-06 1.0000e+00 hypermethylated 5.5036e-05 1.0000e+00 hypermethylated 0.26928756 2.0548e-03 weaklyHypermeth 5.5535e-02 weaklyHypermeth 0.836478 0.774368 0.0877646 8 0.720790 0.746881 -0.02609087 7.5762e-04 9.7125e-01 weaklyHypermeth 2.5643e-02 1.0000e+00 weaklyHypermeth 2.6879e-02 9.8130e-01 weaklyHypermeth 7.2647e-01 1.000000 insignificant 0.0327901 5.4184e-01 insignificant 1.0000000 insignificant 0.4895498 0.774368 -0.26838822 8 0.4393025 0.746881 -0.3075782 9.9734e-01 5.3930e-08 hypomethylated 1.0000e+00 4.4941e-06 hypomethylated 9.9902e-01 6.4161e-04 hypomethylated 1.0000e+00 2.1387e-02 hypomethylated -0.23649745 6.6139e-03 weaklyHypometh 0.1837201 insignificant chr11 61293347 61294347 108077 ENSG00000214780 0.690772 282 8 0.7522269 314 9 0.616459 279 8 0.6649329 323 8 0.734842 148 8 0.753638 380 9 0.692157 220 8 0.827474 355 8 0.763974 292 8 0.588034 234 8 0.791093 287 9 0.614134 120 7 0.723947 328 8 0.728465 116 8 0.6579142 272 8 0.701438 95 7 0.446192 57 5 0.509593 377 8 0.8463782 273 8 0.631581 261 8 0.502292 145 10 0.552787 223 9 0.634588 189 8 0.755067 141 8 0.720944 298 8 0.6490351 389 8 0.709778 236 9 0.589413 129 9 0.726546 289 8 0.739714 493 8 0.707457 367 9 0.6457600 280 9 0.3988531 354 9 0.5215090 267 8 0.7489362 181 4 0.309742 98 3 0.426833 182 9 0.4269992 464 8 0.685863 259 9 0.521653 303 8 0.5543860 203 8 0.3239430 246 8 0.6796577 290 8 0.774334 0.769378 0.684224 0.713113 0.736069 0.799869 0.698968 0.816483 0.770103 0.669701 0.783023 0.6576867 0.7691713 0.690700 0.724391 0.7457286 0.525657 0.5819299 0.831260 0.732693 0.497253 0.563196 0.696297 0.793569 0.681590 0.694218 0.718148 0.622207 0.714731 0.739843 0.7692346 0.693416 0.4403939 0.5637882 0.7039565 0.3304320 0.540433 0.320857 0.723067 0.551779 0.6443688 0.374396 0.665094 8 0.715540 0.676526 0.04273199 8 0.693585 0.676051 0.01753480 0.023317 0.89584177 weaklyHypermeth 1 1.00000 insignificant 0.019211 8.9965e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0256469 0.432207 insignificant 1 insignificant 0.715540 0.4974127 0.2577478 8 0.693585 0.434415 0.2591704 3.0423e-25 1.0000e+00 hypermethylated 2.5352e-23 1.0000e+00 hypermethylated 1.8075e-09 1.0000e+00 hypermethylated 1.6432e-07 1.0000e+00 hypermethylated 0.2146168 1.5829e-02 weaklyHypermeth 2.7771e-01 insignificant 0.715540 0.568899 0.1452529 8 0.693585 0.594375 0.0992104 4.6491e-09 9.9802e-01 weaklyHypermeth 5.1656e-07 1.0000e+00 weaklyHypermeth 2.7136e-05 9.9964e-01 weaklyHypermeth 2.7136e-03 1.000000 weaklyHypermeth 1.3366e-01 1.1375e-01 insignificant 1.0000e+00 insignificant 0.676526 0.4974127 0.2132769 8 0.676051 0.434415 0.241636 3.7102e-14 1.0000e+00 hypermethylated 2.1825e-12 1.0000e+00 hypermethylated 2.5763e-07 1.0000e+00 hypermethylated 1.3779e-05 1.0000e+00 hypermethylated 0.18896991 2.6636e-02 weaklyHypermeth 3.9171e-01 insignificant 0.676628 0.569562 0.0999316 8 0.705500 0.631250 0.07425056 3.8948e-04 9.9712e-01 weaklyHypermeth 1.4425e-02 1.0000e+00 weaklyHypermeth 4.8253e-03 9.9599e-01 weaklyHypermeth 1.9301e-01 1.000000 insignificant 0.1080146 1.8300e-01 insignificant 1.0000000 insignificant 0.4974127 0.568899 -0.12763917 8 0.4344150 0.594375 -0.1599599 9.7346e-01 8.7100e-05 weaklyHypometh 1.0000e+00 1.7949e-03 weaklyHypometh 9.9007e-01 1.4934e-02 weaklyHypometh 1.0000e+00 2.4483e-01 insignificant -0.08095531 3.9494e-01 insignificant 1.0000000 insignificant chr11 62067582 62068582 108083 AHNAK ENSG00000124942 0.498083 647 11 0.2948991 611 12 0.496542 591 12 0.5136153 589 11 0.469821 414 12 0.643576 836 12 0.401285 622 12 0.504562 452 12 0.386689 619 12 0.325748 669 12 0.481331 606 12 0.331011 321 12 0.243502 630 12 0.532921 441 10 0.3458700 604 12 0.499408 258 12 0.251543 80 6 0.293966 822 11 0.4226363 622 11 0.372279 648 11 0.500406 309 12 0.363342 325 11 0.361287 491 12 0.310214 332 11 0.466678 229 10 0.5572142 658 12 0.462278 726 12 0.424504 351 12 0.606460 655 12 0.346425 828 12 0.585955 722 12 0.3587260 742 11 0.0012077 498 12 0.0081462 419 12 0.0870135 773 11 0.000000 76 7 0.033195 535 12 0.0187553 692 12 0.537415 704 12 0.557196 614 11 0.4354524 520 11 0.2611585 1068 11 0.3947529 525 12 0.543506 0.319891 0.587135 0.450138 0.440375 0.664560 0.501670 0.529445 0.434489 0.424819 0.482799 0.3808593 0.3290597 0.528348 0.368047 0.5162739 0.253834 0.3940726 0.425108 0.458026 0.462611 0.358952 0.394892 0.302262 0.468245 0.547506 0.479423 0.448598 0.551517 0.407460 0.5883864 0.484125 0.0025967 0.0086738 0.0065817 0.0000000 0.018984 0.033564 0.588038 0.555483 0.3957608 0.293423 0.399788 11 0.444545 0.474635 -0.01439386 12 0.388289 0.415944 -0.02765520 0.942009 0.32482780 insignificant 1 1.00000 insignificant 0.891457 5.5989e-01 insignificant 1 1.0000000 insignificant -0.0298263 0.437102 insignificant 1 insignificant 0.444866 0.0150401 0.4315915 12 0.412557 0.081678 0.3308787 7.2010e-69 1.0000e+00 hypermethylated 7.2010e-66 1.0000e+00 hypermethylated 5.4915e-27 1.0000e+00 hypermethylated 5.4915e-24 1.0000e+00 hypermethylated 0.3907447 4.0166e-13 hypermethylated 1.3389e-10 hypermethylated 0.444826 0.366948 0.0182219 12 0.396626 0.449385 -0.0527588 6.7367e-01 3.3769e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0793e-01 5.2284e-01 insignificant 1.0000e+00 1.000000 insignificant -2.1731e-02 7.2433e-01 insignificant 1.0000e+00 insignificant 0.474859 0.0150401 0.4526349 12 0.441940 0.081678 0.360262 5.4137e-62 1.0000e+00 hypermethylated 5.4137e-59 1.0000e+00 hypermethylated 3.5468e-24 1.0000e+00 hypermethylated 3.5468e-21 1.0000e+00 hypermethylated 0.42057100 1.5969e-09 hypermethylated 6.6561e-07 hypermethylated 0.475043 0.366948 0.0323830 12 0.432514 0.449385 -0.01687083 3.3357e-01 7.0886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7220e-01 7.4927e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0080958 8.9826e-01 insignificant 1.0000000 insignificant 0.0147206 0.367162 -0.40238599 12 0.0219177 0.481484 -0.4595662 1.0000e+00 1.8462e-45 hypomethylated 1.0000e+00 1.8462e-42 hypomethylated 1.0000e+00 3.6211e-17 hypomethylated 1.0000e+00 3.6211e-14 hypomethylated -0.41247520 1.0524e-03 weaklyHypometh 0.0526210 weaklyHypometh chr11 62544814 62545814 108093 SLC22A8 ENSG00000149452 0.258826 269 5 0.4538086 195 5 0.341060 209 5 0.2995198 323 5 0.621429 96 5 0.243448 424 5 0.500549 168 5 0.364641 210 5 0.435132 292 5 0.261574 234 5 0.362602 153 5 0.463566 149 5 0.739460 214 5 0.329397 131 5 0.5358641 278 5 0.262442 161 5 0.323443 140 5 0.351371 328 5 0.5039349 91 5 0.301881 293 5 0.593878 44 5 0.349280 194 5 0.280130 277 5 0.331237 167 5 0.405462 118 5 0.4741731 219 5 0.255023 100 5 0.397289 95 5 0.365963 189 5 0.476401 232 5 0.510174 241 5 0.4182796 268 5 0.2165965 211 5 0.1792045 117 5 NA 0 0 0.224286 48 5 0.382873 132 5 0.4248866 182 5 0.564422 403 5 0.544092 342 5 0.3695801 304 5 0.5481747 320 5 0.3716726 369 5 0.247823 0.434075 0.327325 0.292992 0.437816 0.233388 0.483658 0.357843 0.421538 0.243802 0.353443 0.4365525 0.7340412 0.310489 0.522479 0.2362010 0.289163 0.3387855 0.490930 0.286791 0.394844 0.322238 0.273711 0.333049 0.396170 0.465229 0.250285 0.367309 0.371470 0.454013 0.4971638 0.411806 0.2190668 0.1923879 NA 0.2186481 0.380901 0.378057 0.531859 0.523206 0.3754206 0.531333 0.354407 5 0.361634 0.389459 -0.02903301 5 0.503929 0.542261 -0.03833237 0.942208 0.31216161 insignificant 1 1.00000 insignificant 0.874153 6.2967e-01 insignificant 1 1.0000000 insignificant -0.0070767 0.863844 insignificant 1 insignificant 0.360983 0.2898551 0.0618738 5 0.372167 0.288437 0.0837296 6.0233e-05 8.3645e-01 weaklyHypermeth 7.7222e-04 1.0000e+00 weaklyHypermeth 1.1183e-03 8.9594e-01 weaklyHypermeth 1.8037e-02 1.0000e+00 weaklyHypermeth 0.1121282 9.1230e-02 lowCoverage 1.0000e+00 lowCoverage 0.360983 0.471231 -0.1114354 5 0.372167 0.484244 -0.1120768 9.9689e-01 9.7131e-04 weaklyHypometh 1.0000e+00 1.3876e-01 insignificant 9.9623e-01 7.3326e-03 weaklyHypometh 1.0000e+00 0.733257 insignificant -8.1891e-02 1.6484e-01 insignificant 1.0000e+00 insignificant 0.387067 0.2898551 0.0917404 5 0.399166 0.288437 0.110728 5.6796e-05 9.7538e-01 weaklyHypermeth 7.6751e-04 1.0000e+00 weaklyHypermeth 9.2045e-04 9.8099e-01 weaklyHypermeth 1.7045e-02 1.0000e+00 weaklyHypermeth 0.11920487 7.5476e-02 lowCoverage 8.2039e-01 lowCoverage 0.387067 0.471231 -0.0819166 5 0.399166 0.484244 -0.08507816 9.9479e-01 1.0764e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9430e-01 1.2161e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0748142 1.9703e-01 insignificant 1.0000000 insignificant 0.2898551 0.471231 -0.17118367 5 0.2884374 0.484244 -0.1958065 9.9971e-01 3.0336e-05 weaklyHypometh 1.0000e+00 7.9831e-04 weaklyHypometh 9.9988e-01 3.4723e-04 weaklyHypometh 1.0000e+00 1.6535e-02 weaklyHypometh -0.19401904 1.9607e-02 lowCoverage 0.3630940 lowCoverage chr11 63442889 63443889 108109 RCOR2 ENSG00000167771 0.036806 254 12 0.0276453 383 15 0.096819 453 15 0.0485423 245 11 0.039443 342 15 0.059973 395 19 0.097146 361 14 0.086261 318 15 0.024950 430 15 0.064794 393 16 0.021313 477 14 0.062213 567 15 0.064031 363 14 0.270833 13 0 0.0152003 381 15 0.005002 314 12 0.037192 361 12 0.016631 165 7 0.0354175 356 12 0.018052 328 12 0.052708 227 13 0.033264 201 7 0.125565 444 19 0.035876 204 10 0.033992 143 6 0.0174898 490 19 0.052785 375 13 0.053542 246 14 0.052255 249 12 0.020843 467 19 0.034574 503 20 0.0090266 404 15 0.0423633 315 13 0.0497591 310 12 0.0432600 323 10 0.122358 165 5 0.067376 206 13 0.1693658 291 19 0.010112 347 12 0.104047 312 12 0.0895062 175 7 0.1822772 236 7 0.0248589 291 13 0.024669 0.036904 0.066176 0.042178 0.032046 0.101917 0.025151 0.043660 0.022834 0.035311 0.043936 0.0435594 0.0842768 0.096882 0.017699 0.0016153 0.032144 0.0378818 0.067637 0.041953 0.092259 0.077839 0.084431 0.077442 0.040177 0.041659 0.083300 0.090644 0.050929 0.026904 0.0405286 0.015021 0.0429902 0.0304102 0.0598049 0.0399769 0.116026 0.110240 0.028377 0.078207 0.0259915 0.049530 0.072357 5 0.046252 0.042752 0.00159401 15 0.085791 0.050248 0.03554282 0.168866 0.83252550 insignificant 1 1.00000 insignificant 0.194864 8.9635e-01 insignificant 1 1.0000000 insignificant 0.0129199 0.409237 insignificant 1 insignificant 0.046252 0.0745342 -0.0253334 13 0.085791 0.100858 -0.0150670 9.9897e-01 2.5357e-04 weaklyHypometh 1.0000e+00 3.6224e-02 weaklyHypometh 9.9615e-01 7.1784e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0260006 3.2256e-01 insignificant 1.0000e+00 insignificant 0.046134 0.049229 -0.0049432 9 0.044370 0.063407 -0.0190370 5.9883e-01 5.6640e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1996e-01 6.4550e-01 insignificant 1.0000e+00 1.000000 insignificant -2.5747e-02 4.7279e-01 insignificant 1.0000e+00 insignificant 0.042752 0.0745342 -0.0294164 13 0.050248 0.100858 -0.050610 9.9489e-01 6.3781e-07 weaklyHypometh 1.0000e+00 1.2756e-04 weaklyHypometh 9.9407e-01 9.3211e-04 weaklyHypometh 1.0000e+00 1.8642e-01 insignificant -0.03892052 1.3581e-01 insignificant 1.0000e+00 insignificant 0.042111 0.049229 0.0031886 9 0.033844 0.063407 -0.02956264 5.1758e-01 5.1683e-03 inconclusive 1.0000e+00 9.3349e-01 insignificant 4.4043e-01 4.4241e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0386670 2.8525e-01 insignificant 1.0000000 insignificant 0.0746269 0.049229 0.02487563 7 0.1109434 0.063407 0.0475367 1.2111e-01 9.8527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1589e-01 9.9962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00025357 9.9478e-01 insignificant 1.0000000 insignificant chr11 63444029 63445029 108110 RCOR2 ENSG00000167771 0.139366 614 18 0.1292691 423 17 0.235404 564 16 0.1045694 711 19 0.154580 439 19 0.254986 897 18 0.266210 534 20 0.147757 508 19 0.101064 755 19 0.140342 895 16 0.196720 421 19 0.193467 532 14 0.247485 633 15 0.197107 477 13 0.1448900 674 16 0.182828 534 15 0.032756 197 13 0.143464 697 17 0.1119367 351 15 0.206936 653 18 0.177106 234 17 0.154817 469 15 0.138422 439 18 0.087491 363 19 0.162039 577 15 0.1886250 701 19 0.166718 627 15 0.103836 376 14 0.287613 426 17 0.185523 632 18 0.141432 578 18 0.1687680 745 19 0.3185087 444 20 0.2782335 395 13 0.3384103 559 12 0.428138 278 13 0.341186 466 17 0.4766131 476 17 0.193130 651 19 0.299564 619 19 0.2201547 502 17 0.2699605 585 13 0.1873206 612 18 0.061818 0.059765 0.199754 0.066790 0.072151 0.159966 0.147023 0.079792 0.061510 0.077836 0.133698 0.0648577 0.1440422 0.111433 0.066808 0.0483117 0.037083 0.1291469 0.050832 0.080196 0.093876 0.087907 0.072324 0.057108 0.071943 0.061059 0.108191 0.060780 0.193336 0.067411 0.0820783 0.091880 0.2291344 0.1846045 0.2069343 0.4242766 0.260413 0.341972 0.140996 0.159598 0.1373262 0.151619 0.141014 12 0.109827 0.102223 0.01485235 18 0.191277 0.189758 0.00151938 0.051661 0.82998626 insignificant 1 1.00000 insignificant 0.160829 6.7978e-01 insignificant 1 1.0000000 insignificant 0.0030243 0.878278 insignificant 1 insignificant 0.109827 0.3096330 -0.1831280 18 0.191277 0.347416 -0.1561388 9.9999e-01 3.2634e-30 weaklyHypometh 1.0000e+00 3.2634e-27 weaklyHypometh 1.0000e+00 2.6015e-11 weaklyHypometh 1.0000e+00 2.6015e-08 weaklyHypometh -0.1969579 5.4690e-04 weaklyHypometh 2.1876e-02 weaklyHypometh 0.109827 0.158302 -0.0356120 18 0.191277 0.269392 -0.0781150 9.9433e-01 5.7144e-09 weaklyHypometh 1.0000e+00 5.7144e-06 weaklyHypometh 9.9431e-01 1.7342e-05 weaklyHypometh 1.0000e+00 0.013068 weaklyHypometh -6.7469e-02 3.2809e-02 weaklyHypometh 1.0000e+00 insignificant 0.102157 0.3093965 -0.1965125 18 0.181507 0.332311 -0.150804 9.9995e-01 3.2963e-22 weaklyHypometh 1.0000e+00 3.2963e-19 weaklyHypometh 9.9999e-01 3.3231e-09 weaklyHypometh 1.0000e+00 3.3231e-06 weaklyHypometh -0.19998221 4.6158e-04 weaklyHypometh 1.9232e-02 weaklyHypometh 0.102223 0.158302 -0.0560616 18 0.189758 0.269392 -0.07963441 7.1314e-01 1.5783e-10 weaklyHypometh 1.0000e+00 1.5783e-07 weaklyHypometh 9.9198e-01 3.8480e-06 weaklyHypometh 1.0000e+00 0.003848 weaklyHypometh -0.0704933 2.8742e-02 weaklyHypometh 0.9663255 insignificant 0.3096330 0.158302 0.13563059 18 0.3474159 0.269392 0.0780238 1.4437e-06 9.5993e-01 weaklyHypermeth 2.8874e-04 1.0000e+00 weaklyHypermeth 3.5987e-03 9.9750e-01 weaklyHypermeth 4.4984e-01 1.0000e+00 insignificant 0.12948891 7.5121e-03 weaklyHypermeth 0.1976856 insignificant chr11 63538035 63539035 108113 OTUB1 ENSG00000167770 0.901563 159 7 0.7433134 285 9 0.878810 262 9 0.8536079 239 8 0.870740 165 8 0.782043 394 8 0.812423 181 8 0.895859 159 8 0.819921 126 4 0.940899 109 8 0.868898 375 8 0.870040 71 8 0.566224 143 4 0.867380 124 4 0.9309112 154 4 0.825000 60 3 NA 0 0 0.880513 300 4 0.8452790 416 8 0.854402 223 6 0.882778 126 4 0.869122 92 4 0.876883 203 9 0.857778 154 7 0.926704 321 7 0.9169367 312 9 0.860938 237 8 0.596230 100 4 0.940686 240 8 0.921120 332 9 0.885977 287 9 0.9649424 249 9 0.7305264 265 9 0.5191014 203 8 0.8125000 147 5 0.776042 140 5 0.649446 192 7 0.6483886 336 9 0.563899 203 8 0.635379 220 8 0.5031543 172 7 0.3907365 234 3 0.6637936 161 8 0.936106 0.769443 0.878988 0.896087 0.850335 0.909472 0.862805 0.880592 0.884868 0.927433 0.858574 0.8671493 0.8764726 0.910357 0.869090 0.9006757 NA 0.8774002 0.963430 0.881873 0.909454 0.864332 0.959337 0.983514 0.958126 0.969564 0.857085 0.816722 0.933375 0.906669 0.8884716 0.948810 0.8395698 0.7205928 0.9023066 0.8371848 0.830796 0.771464 0.844349 0.857284 0.8035756 0.759489 0.870732 3 0.880608 0.906521 -0.02948272 8 0.699750 0.786085 -0.08633572 0.999993 0.03651596 weaklyHypometh 1 1.00000 insignificant 0.999990 5.3421e-03 weaklyHypometh 1 0.9331354 insignificant -0.0324908 0.336719 insignificant 1 insignificant 0.880608 0.7077163 0.1366537 8 0.699750 0.584258 0.1154917 3.7498e-11 9.9690e-01 weaklyHypermeth 8.5222e-10 1.0000e+00 weaklyHypermeth 3.1752e-04 9.9201e-01 weaklyHypermeth 7.0560e-03 1.0000e+00 weaklyHypermeth 0.1531831 1.4392e-02 weaklyHypermeth 2.6168e-01 insignificant 0.881055 0.809091 0.0808211 8 0.855250 0.583275 0.2719747 2.2630e-20 9.9794e-01 weaklyHypermeth 1.1315e-17 1.0000e+00 weaklyHypermeth 4.1101e-08 9.9703e-01 weaklyHypermeth 6.8502e-06 1.000000 weaklyHypermeth 2.9112e-01 2.2459e-03 weaklyHypermeth 1.2477e-01 insignificant 0.906521 0.7077163 0.1847786 8 0.786085 0.584258 0.201827 2.2361e-13 1.0000e+00 weaklyHypermeth 1.0164e-11 1.0000e+00 weaklyHypermeth 1.2513e-06 1.0000e+00 weaklyHypermeth 5.4403e-05 1.0000e+00 weaklyHypermeth 0.18567390 5.4956e-03 weaklyHypermeth 1.1595e-01 insignificant 0.907477 0.809091 0.1097020 8 0.905215 0.583275 0.32194059 7.2604e-20 9.9997e-01 weaklyHypermeth 7.2604e-17 1.0000e+00 weaklyHypermeth 3.7066e-08 1.0000e+00 weaklyHypermeth 9.2664e-06 1.000000 weaklyHypermeth 0.3236153 8.3358e-04 hypermethylated 0.0641219 hypermethylated 0.7091478 0.809091 -0.05644480 8 0.6770559 0.583275 0.0937811 5.0454e-03 2.3117e-01 inconclusive 6.3068e-01 1.0000e+00 insignificant 3.5008e-03 7.1824e-01 inconclusive 4.4984e-01 1.0000e+00 insignificant 0.13794143 6.6036e-02 insignificant 0.8923798 insignificant chr11 63655906 63656906 108121 FLRT1 ENSG00000126500 0.634963 257 7 0.5141064 295 7 0.642190 283 7 0.5617904 299 6 0.496344 126 7 0.509687 412 7 0.674421 227 7 0.605102 228 7 0.508947 333 7 0.695605 293 7 0.773709 316 7 0.685315 175 7 0.394645 315 7 0.437511 193 6 0.4329273 266 7 0.515731 126 7 0.534572 120 5 0.492262 367 6 0.5057338 151 7 0.415146 326 7 0.788188 151 7 0.393141 146 6 0.600149 243 7 0.763965 156 7 0.528889 225 6 0.4334451 393 7 0.606581 140 6 0.856934 118 6 0.624352 221 6 0.467065 464 7 0.569389 417 7 0.7035277 331 7 0.6700262 307 6 0.8517934 191 6 0.9739162 411 7 0.618788 68 5 0.778659 279 6 0.5548574 379 7 0.312067 432 7 0.273788 364 7 0.2023172 306 7 0.1830062 334 7 0.3266274 335 7 0.656229 0.481805 0.564335 0.534982 0.403539 0.438214 0.604281 0.524143 0.485857 0.620482 0.744956 0.5779335 0.3161750 0.410951 0.351262 0.5178997 0.477249 0.4197496 0.421475 0.308400 0.719644 0.340115 0.632510 0.697006 0.595430 0.431540 0.673001 0.819828 0.555139 0.339818 0.4381662 0.638614 0.6091503 0.7733287 0.9466039 0.6014884 0.726006 0.579274 0.155143 0.127873 0.1440917 0.115726 0.186500 6 0.501762 0.559774 -0.03692710 7 0.592960 0.616094 -0.02313395 0.952188 0.28566558 insignificant 1 1.00000 insignificant 0.998921 5.2611e-02 insignificant 1 1.0000000 insignificant -0.0597669 0.229182 insignificant 1 insignificant 0.501665 0.7449418 -0.2245901 6 0.548091 0.767219 -0.2191276 9.9998e-01 5.2098e-11 hypomethylated 1.0000e+00 1.3025e-08 hypomethylated 9.9999e-01 4.2550e-06 hypomethylated 1.0000e+00 8.5101e-04 hypomethylated -0.1898047 2.9571e-02 weaklyHypometh 4.4136e-01 insignificant 0.501665 0.176104 0.3407139 7 0.548091 0.195765 0.3523262 1.0608e-24 1.0000e+00 hypermethylated 1.0608e-21 1.0000e+00 hypermethylated 9.9451e-15 1.0000e+00 hypermethylated 9.9451e-12 1.000000 hypermethylated 2.9197e-01 1.3039e-05 hypermethylated 2.1731e-03 hypermethylated 0.559667 0.7449418 -0.1726939 6 0.577835 0.767219 -0.189384 9.9942e-01 1.1845e-06 weaklyHypometh 1.0000e+00 1.9742e-04 weaklyHypometh 9.9691e-01 3.1166e-03 weaklyHypometh 1.0000e+00 5.1944e-01 insignificant -0.13003785 1.2162e-01 insignificant 1.0000e+00 insignificant 0.559667 0.176104 0.4070656 7 0.577835 0.195765 0.38206981 5.1004e-18 1.0000e+00 hypermethylated 2.5502e-15 1.0000e+00 hypermethylated 4.9828e-14 1.0000e+00 hypermethylated 4.9828e-11 1.000000 hypermethylated 0.3517412 5.3697e-06 hypermethylated 0.0026848 hypermethylated 0.7440294 0.178430 0.59786018 6 0.6713163 0.296294 0.3750221 3.6627e-22 1.0000e+00 hypermethylated 3.6627e-19 1.0000e+00 hypermethylated 1.7451e-09 9.9834e-01 hypermethylated 1.7451e-06 1.0000e+00 hypermethylated 0.48177903 2.5610e-04 hypermethylated 0.0243764 hypermethylated chr11 63769033 63770033 108124 FKBP2 ENSG00000173486 0.493103 152 4 0.4959002 104 5 0.423756 146 5 0.5515152 85 3 0.494203 96 6 0.678770 150 5 0.490976 172 5 0.503513 98 5 0.568646 136 5 0.526350 91 5 0.414272 162 5 0.499629 119 4 0.661806 108 4 0.057143 37 1 0.5933333 112 4 0.565072 129 5 0.475317 77 4 0.707048 96 2 0.5058766 97 4 0.467479 164 4 0.635000 69 5 0.506667 42 1 0.636364 124 4 0.530093 71 5 0.430272 60 1 0.4210728 149 5 0.437057 79 5 0.497932 85 5 0.521546 80 4 0.564047 172 5 0.566482 163 5 0.4673776 239 4 0.1986443 138 5 0.2142857 139 5 0.2500000 98 4 0.335227 43 2 0.391667 110 4 0.3116282 187 5 0.502323 136 5 0.526364 149 5 0.5266667 100 4 0.5068586 172 4 0.5817166 108 4 0.351023 0.328360 0.331995 0.292979 0.290640 0.508498 0.441198 0.307265 0.280690 0.337384 0.369085 0.2689293 0.2643635 0.301934 0.342927 0.2661756 0.272705 0.2945970 0.254967 0.369477 0.404512 0.156290 0.427558 0.464160 0.269886 0.298010 0.318485 0.258591 0.324555 0.295290 0.3072625 0.353072 0.1011833 0.0783436 0.1113320 0.1149309 0.200976 0.159948 0.259681 0.281486 0.2668293 0.230893 0.256618 1 0.400257 0.387097 0.00247632 5 0.454746 0.508754 -0.05400805 0.669101 0.16524568 insignificant 1 1.00000 insignificant 0.680842 3.2671e-01 insignificant 1 1.0000000 insignificant -0.0091406 0.803106 lowCoverage 1 lowCoverage 0.400257 0.1778711 0.2082192 5 0.454746 0.236717 0.2180288 1.7223e-12 1.0000e+00 hypermethylated 4.9210e-11 1.0000e+00 hypermethylated 1.5165e-06 9.9999e-01 hypermethylated 6.5935e-05 1.0000e+00 hypermethylated 0.2251100 8.9315e-05 lowCoverage 5.2878e-03 lowCoverage 0.400257 0.206015 0.0796384 5 0.454746 0.592912 -0.1381660 4.8214e-02 6.3935e-01 weaklyHypermeth 9.6428e-01 1.0000e+00 insignificant 7.1870e-02 5.1709e-02 insignificant 1.0000e+00 1.000000 insignificant -2.0100e-02 5.4540e-01 lowCoverage 1.0000e+00 lowCoverage 0.387097 0.1778711 0.2034856 5 0.508754 0.236717 0.272037 1.7801e-10 9.9895e-01 hypermethylated 5.3317e-09 1.0000e+00 hypermethylated 1.0405e-05 9.9534e-01 hypermethylated 3.7161e-04 1.0000e+00 hypermethylated 0.23425052 9.6756e-05 lowCoverage 6.9111e-03 lowCoverage 0.387097 0.206015 0.0675978 5 0.508754 0.592912 -0.08415792 7.1230e-02 1.4784e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6478e-01 2.8150e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0109598 6.7277e-01 lowCoverage 1.0000000 lowCoverage 0.1778711 0.206015 -0.12825362 5 0.2367169 0.592912 -0.3561948 9.9461e-01 5.8587e-06 weaklyHypometh 1.0000e+00 2.0202e-04 weaklyHypometh 9.9292e-01 5.6021e-05 weaklyHypometh 1.0000e+00 4.6685e-03 weaklyHypometh -0.24521032 1.7483e-04 lowCoverage 0.0243764 lowCoverage chr11 64237982 64238982 108140 NRXN2 ENSG00000110076 0.136595 481 10 0.0868675 426 13 0.159164 454 13 0.1076710 485 10 0.147990 231 13 0.165866 813 13 0.086898 424 13 0.082493 381 10 0.115356 590 10 0.098901 500 13 0.095330 363 13 0.117340 238 13 0.068853 439 10 0.100271 243 8 0.0880556 454 13 0.035281 141 10 0.063854 316 10 0.061542 711 10 0.1172133 154 8 0.070182 585 13 0.107580 149 13 0.051071 378 13 0.121537 361 13 0.086807 274 13 0.139136 187 10 0.0971731 478 13 0.107526 404 13 0.070637 216 13 0.093371 236 7 0.048016 639 13 0.055055 513 13 0.0879377 643 13 0.0248873 294 10 0.0293269 226 8 0.0000000 152 7 0.000000 109 7 0.053729 309 13 0.0901135 523 13 0.090895 705 13 0.125686 499 10 0.0394869 446 10 0.1401044 491 10 0.1207008 533 11 0.204174 0.137825 0.234507 0.193165 0.209235 0.231682 0.130940 0.117836 0.183066 0.138648 0.181446 0.1950235 0.0569042 0.147653 0.138993 0.0866291 0.086993 0.1029563 0.138969 0.091718 0.134443 0.065165 0.168701 0.149196 0.191506 0.153586 0.152005 0.133975 0.178056 0.086542 0.0827013 0.137587 0.0362546 0.0118015 0.0150266 0.0000000 0.036066 0.078658 0.121139 0.150744 0.0570885 0.151438 0.083925 7 0.147823 0.118133 0.02168937 13 0.096711 0.079227 0.01748405 0.085987 0.99807596 insignificant 1 1.00000 insignificant 0.219671 9.6960e-01 insignificant 1 1.0000000 insignificant 0.0114656 0.315929 insignificant 1 insignificant 0.147893 0.0440174 0.0901630 13 0.104150 0.049063 0.0550866 8.9623e-09 4.7749e-01 weaklyHypermeth 1.6273e-07 1.0000e+00 weaklyHypermeth 1.0906e-07 9.7650e-01 weaklyHypermeth 6.8165e-06 1.0000e+00 weaklyHypermeth 0.0672768 2.8518e-03 weaklyHypermeth 7.1294e-02 weaklyHypermeth 0.147823 0.118923 0.0398864 11 0.096711 0.094195 0.0025152 3.3672e-01 3.7206e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 2.5457e-01 1.8639e-01 insignificant 1.0000e+00 1.000000 insignificant -3.0884e-03 8.7928e-01 insignificant 1.0000e+00 insignificant 0.118239 0.0440174 0.0673920 13 0.085321 0.049063 0.036258 5.2260e-05 5.0878e-01 weaklyHypermeth 7.1590e-04 1.0000e+00 weaklyHypermeth 3.4013e-05 9.6731e-01 weaklyHypermeth 1.0231e-03 1.0000e+00 weaklyHypermeth 0.05581120 8.2123e-03 weaklyHypermeth 1.5793e-01 insignificant 0.118133 0.118923 0.0153690 11 0.079227 0.094195 -0.01496887 8.4777e-01 2.1669e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 7.8172e-01 1.8931e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0145540 4.8838e-01 insignificant 1.0000000 insignificant 0.0440174 0.118967 -0.06526257 11 0.0490634 0.101441 -0.0523779 9.9912e-01 5.4663e-07 weaklyHypometh 1.0000e+00 2.7331e-05 weaklyHypometh 9.9997e-01 5.4904e-05 weaklyHypometh 1.0000e+00 4.6685e-03 weaklyHypometh -0.07036523 1.4745e-02 weaklyHypometh 0.2835582 insignificant chr11 64366455 64367455 108158 MEN1 ENSG00000133895 0.607469 174 6 0.4302426 198 6 0.403990 193 8 0.5150881 191 6 0.341931 128 4 0.632343 288 7 0.496298 153 6 0.398760 209 6 0.463997 196 7 0.406892 174 4 0.729351 208 6 0.331575 111 3 0.369568 169 4 0.652615 88 4 0.4817498 181 4 0.593197 61 5 0.234722 51 3 0.712715 201 5 0.3681070 260 6 0.407527 207 7 0.617514 94 8 0.545457 163 6 0.572467 127 4 0.403788 143 7 0.471164 122 7 0.3442253 234 6 0.660982 149 4 0.437428 93 6 0.412796 227 6 0.414365 297 6 0.371562 240 7 0.7044167 233 7 0.6653139 128 6 0.5088848 126 5 0.5625000 201 3 0.625510 75 5 0.648316 194 8 0.7263734 249 6 0.392447 231 7 0.389741 250 7 0.3025921 195 6 0.4134615 196 6 0.5957899 211 6 0.484259 0.436529 0.433182 0.364716 0.311582 0.461708 0.534923 0.376163 0.421106 0.357921 0.663122 0.4151736 0.1794003 0.489165 0.334581 0.4682877 0.225285 0.5078684 0.301965 0.235247 0.671265 0.238495 0.500947 0.334427 0.353020 0.297074 0.440524 0.361095 0.373331 0.306383 0.3076297 0.710860 0.8210122 0.6895897 0.7978723 0.7603126 0.863527 0.760372 0.271160 0.251122 0.1911987 0.266016 0.294486 4 0.416449 0.423186 0.00660752 6 0.459777 0.488412 -0.02863539 0.868824 0.43193212 insignificant 1 1.00000 insignificant 0.819112 5.4523e-01 insignificant 1 1.0000000 insignificant -0.0174403 0.708288 insignificant 1 insignificant 0.416449 0.7749229 -0.3352190 6 0.459777 0.597206 -0.1374298 7.3912e-01 6.1336e-14 hypomethylated 1.0000e+00 2.0445e-11 hypomethylated 6.9208e-01 1.2619e-06 hypomethylated 1.0000e+00 4.2064e-04 hypomethylated -0.1439095 4.9389e-03 weaklyHypometh 1.0467e-01 insignificant 0.416449 0.289012 0.1375742 6 0.459777 0.426413 0.0333640 3.6860e-03 8.5980e-01 weaklyHypermeth 1.3164e-01 1.0000e+00 insignificant 2.5731e-02 9.6791e-01 weaklyHypermeth 8.0411e-01 1.000000 insignificant 6.0100e-02 3.2390e-01 insignificant 1.0000e+00 insignificant 0.423186 0.7749229 -0.3357831 6 0.488412 0.597206 -0.108794 5.3519e-01 9.0681e-09 hypomethylated 1.0000e+00 3.0227e-06 hypomethylated 5.3875e-01 1.0668e-04 hypomethylated 1.0000e+00 2.6670e-02 hypomethylated -0.12646919 1.6707e-02 weaklyHypometh 2.8316e-01 insignificant 0.423186 0.289012 0.1246512 6 0.488412 0.426413 0.06199938 9.4525e-03 9.1365e-01 weaklyHypermeth 2.5547e-01 1.0000e+00 insignificant 1.2849e-02 9.7816e-01 weaklyHypermeth 4.2830e-01 1.000000 insignificant 0.0775408 2.2589e-01 insignificant 1.0000000 insignificant 0.7749229 0.289012 0.45470318 6 0.5972065 0.426413 0.1707938 2.2202e-13 9.2560e-01 hypermethylated 1.1101e-10 1.0000e+00 hypermethylated 3.9813e-04 9.0937e-01 hypermethylated 1.1400e-01 1.0000e+00 insignificant 0.20401003 9.1665e-03 weaklyHypermeth 0.1992720 insignificant chr11 64449697 64450697 108159 PPP2R5B ENSG00000068971 0.745679 370 11 0.5517425 211 11 0.678118 238 10 0.7492594 234 11 0.587500 80 4 0.657451 349 11 0.683308 214 10 0.510778 156 10 0.615163 151 10 0.833376 135 9 0.741280 248 10 0.745775 151 10 0.500595 192 10 NA 0 0 0.6949408 166 10 0.527548 91 8 0.715140 110 7 0.701438 358 11 0.7128382 139 10 0.652775 292 11 0.605488 125 7 0.433034 191 11 0.656450 261 11 0.464084 123 7 0.711033 166 8 0.7648779 222 10 0.519866 143 9 0.683357 88 5 0.697551 154 10 0.732895 251 10 0.515922 244 11 0.8370165 447 10 0.2412156 250 10 0.4144120 194 10 0.5032619 193 3 0.382756 193 11 0.414105 130 10 0.4423587 266 11 0.513095 269 11 0.498663 436 11 0.4680537 273 11 0.4955508 311 11 0.5670621 302 11 0.753997 0.590079 0.712405 0.750627 0.729216 0.724140 0.788566 0.677067 0.666776 0.794786 0.785574 0.7674702 0.6114394 NA 0.763777 0.6290762 0.718520 0.7238833 0.735599 0.686786 0.717112 0.491148 0.716485 0.605125 0.804509 0.785640 0.600064 0.763863 0.670642 0.755290 0.5955964 0.807669 0.2631332 0.3492770 0.4103940 0.3478088 0.388802 0.300905 0.598397 0.586787 0.5090965 0.591964 0.577876 4 0.680309 0.687371 0.00121794 10 0.640295 0.625651 0.01464405 0.232956 0.75017689 insignificant 1 1.00000 insignificant 0.111458 8.5766e-01 insignificant 1 1.0000000 insignificant 0.0282743 0.513042 insignificant 1 insignificant 0.680309 0.3401305 0.3489179 10 0.640295 0.357420 0.2828749 2.5095e-33 1.0000e+00 hypermethylated 6.2739e-31 1.0000e+00 hypermethylated 8.1450e-12 9.9997e-01 hypermethylated 1.6290e-09 1.0000e+00 hypermethylated 0.2637206 1.4632e-04 hypermethylated 7.7011e-03 hypermethylated 0.682429 0.467630 0.1808226 10 0.686382 0.503209 0.1831736 3.6966e-17 1.0000e+00 weaklyHypermeth 1.2322e-14 1.0000e+00 weaklyHypermeth 4.8832e-11 9.9997e-01 weaklyHypermeth 2.4416e-08 1.000000 weaklyHypermeth 1.5492e-01 1.8761e-05 weaklyHypermeth 2.6801e-03 weaklyHypermeth 0.687371 0.3401305 0.3470260 10 0.625651 0.357420 0.268231 5.1806e-19 1.0000e+00 hypermethylated 5.7563e-17 1.0000e+00 hypermethylated 2.3408e-08 9.9968e-01 hypermethylated 1.8651e-06 1.0000e+00 hypermethylated 0.23544631 4.1672e-04 hypermethylated 1.8118e-02 hypermethylated 0.688511 0.467630 0.1733022 10 0.682528 0.503209 0.17931948 1.0291e-09 9.9986e-01 weaklyHypermeth 1.5426e-07 1.0000e+00 weaklyHypermeth 3.1449e-06 9.9936e-01 weaklyHypermeth 3.9311e-04 1.000000 weaklyHypermeth 0.1266463 6.9610e-03 weaklyHypermeth 0.4350646 insignificant 0.3420837 0.467630 -0.18244851 10 0.3899126 0.503209 -0.1132960 9.9596e-01 2.1311e-06 weaklyHypometh 1.0000e+00 8.5244e-05 weaklyHypometh 9.9415e-01 1.4386e-03 weaklyHypometh 1.0000e+00 3.9960e-02 weaklyHypometh -0.10880000 2.8109e-02 weaklyHypometh 0.4764266 insignificant chr11 64480213 64481213 108161 GPHA2 ENSG00000149735 0.597666 159 5 0.7751587 91 4 0.660718 159 5 0.7106546 95 4 0.631043 110 6 0.585804 268 5 0.732551 191 5 0.720253 150 5 0.694197 151 6 0.738253 117 5 0.678096 201 6 0.705484 76 5 0.730423 193 5 0.861111 27 2 0.7102443 155 5 0.621528 81 5 0.637297 130 5 0.660009 127 5 0.6418436 170 5 0.724207 182 6 0.784641 45 4 0.724116 40 4 0.651724 156 5 0.733044 67 4 0.816667 23 2 0.6527886 233 6 0.935526 31 2 0.615079 40 3 0.623527 216 5 0.714773 219 6 0.706673 230 6 0.7035416 263 5 0.6484458 74 5 0.5302969 113 5 0.5941880 86 5 0.838095 24 2 0.552203 79 6 0.6361020 204 6 0.657933 121 5 0.702694 163 5 0.6162264 112 4 0.6790744 134 4 0.7193345 114 4 0.639016 0.765197 0.623206 0.663850 0.678123 0.629317 0.674584 0.663322 0.683267 0.714451 0.645150 0.6789921 0.6737737 0.873235 0.665915 0.7553354 0.556170 0.6399665 0.677438 0.686218 0.773595 0.656365 0.598063 0.709970 0.738821 0.616433 0.878673 0.706664 0.620287 0.692872 0.6534056 0.643233 0.5649802 0.6498943 0.6066291 0.8063298 0.546820 0.682914 0.686224 0.658911 0.6372668 0.695123 0.676124 3 0.629015 0.586692 0.02191674 5 0.677161 0.672837 0.00432392 0.199022 0.68571967 insignificant 1 1.00000 insignificant 0.753801 5.6919e-01 insignificant 1 1.0000000 insignificant -0.0310146 0.313206 lowCoverage 1 lowCoverage 0.629015 0.6379310 0.0334600 5 0.677161 0.616900 0.0602610 3.4017e-02 9.5934e-01 weaklyHypermeth 3.3026e-01 1.0000e+00 insignificant 4.6093e-02 9.2721e-01 weaklyHypermeth 4.9035e-01 1.0000e+00 insignificant 0.0576052 2.6876e-01 lowCoverage 1.0000e+00 lowCoverage 0.629015 0.540373 0.0203212 5 0.677161 0.706599 -0.0294379 5.4153e-01 9.1478e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0687e-01 2.7795e-02 inconclusive 1.0000e+00 1.000000 insignificant 1.5775e-02 5.1086e-01 lowCoverage 1.0000e+00 lowCoverage 0.586692 0.6379310 0.0145950 5 0.672837 0.616900 0.055937 3.6484e-02 8.2002e-01 weaklyHypermeth 3.4747e-01 1.0000e+00 insignificant 6.1328e-02 9.7969e-01 insignificant 6.3224e-01 1.0000e+00 insignificant 0.08861981 1.2505e-01 lowCoverage 1.0000e+00 lowCoverage 0.586692 0.540373 -0.0069962 5 0.672837 0.706599 -0.03376181 8.6341e-01 5.1061e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6825e-01 8.8778e-02 insignificant 1.0000e+00 1.000000 insignificant 0.0467893 1.6141e-01 lowCoverage 1.0000000 lowCoverage 0.6379310 0.540373 -0.01585309 5 0.6168997 0.706599 -0.0896989 8.1296e-01 2.5487e-02 weaklyHypometh 1.0000e+00 2.9985e-01 insignificant 9.1909e-01 4.2868e-02 weaklyHypometh 1.0000e+00 5.7157e-01 insignificant -0.04183054 4.1923e-01 lowCoverage 1.0000000 lowCoverage chr11 65038068 65039068 108183 ENSG00000173727 0.832101 250 7 0.6787764 111 7 0.728180 88 7 0.8730060 130 7 0.786630 43 3 0.790746 219 7 0.707236 82 6 0.866767 90 5 0.772031 86 7 0.783971 82 7 0.803389 230 7 0.699134 51 5 0.830952 83 7 1.000000 13 1 0.8304945 83 7 0.490620 55 5 0.622279 40 4 0.766194 155 7 0.8327436 105 7 0.665556 214 7 0.812500 18 1 0.900992 72 6 0.864659 135 7 0.947532 38 4 0.868481 73 7 0.8165518 141 7 0.956349 52 4 0.916667 32 2 0.752721 86 6 0.823315 96 4 0.739972 125 7 0.8373388 259 7 0.8071634 93 7 0.7708614 77 7 0.8554701 129 7 0.757999 47 5 0.508333 45 3 0.7321016 97 6 0.836626 196 7 0.873343 238 7 0.8364807 183 7 0.8949080 212 7 0.8415949 200 7 0.869301 0.675382 0.725099 0.918652 0.867039 0.849878 0.745793 0.920498 0.823604 0.886137 0.839263 0.7576979 0.8528674 0.910671 0.861114 0.6087651 0.649154 0.8978611 0.894666 0.883471 0.888614 0.917876 0.909043 0.883871 0.874552 0.880611 0.956093 0.946237 0.845853 0.875778 0.8166375 0.873459 0.8151120 0.7682077 0.8391209 0.7852879 0.730108 0.836014 0.880127 0.915652 0.8710856 0.932513 0.899402 2 0.816290 0.863354 -0.03709167 7 0.716327 0.879593 -0.16326670 0.996241 0.03096402 weaklyHypometh 1 1.00000 insignificant 0.999997 1.5060e-03 weaklyHypometh 1 0.5020062 insignificant -0.0850496 0.010951 weaklyHypometh 1 insignificant 0.816206 0.7930328 0.0297370 7 0.684808 0.762680 -0.0778728 3.5439e-01 7.3227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3249e-01 8.6928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0293856 6.0743e-01 insignificant 1.0000e+00 insignificant 0.817727 0.867833 -0.0649713 7 0.798834 0.861232 -0.0623982 9.9885e-01 2.6547e-03 weaklyHypometh 1.0000e+00 2.7183e-01 insignificant 9.9944e-01 1.0310e-03 weaklyHypometh 1.0000e+00 0.206196 insignificant -8.8550e-02 3.0909e-03 weaklyHypometh 1.6268e-01 insignificant 0.863233 0.7930328 0.0675738 7 0.866215 0.762680 0.103535 4.1728e-03 9.9960e-01 weaklyHypermeth 4.3466e-02 1.0000e+00 weaklyHypermeth 4.6979e-03 1.0000e+00 weaklyHypermeth 7.0118e-02 1.0000e+00 weaklyHypermeth 0.11443513 7.0206e-02 insignificant 8.0697e-01 insignificant 0.862867 0.867833 -0.0287057 7 0.827991 0.861232 -0.03324168 9.6614e-01 6.7564e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6091e-01 5.2914e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0035006 8.8253e-01 insignificant 1.0000000 insignificant 0.7929607 0.867833 -0.09407849 7 0.7663033 0.861232 -0.0949291 9.9998e-01 4.2309e-04 weaklyHypometh 1.0000e+00 7.0515e-03 weaklyHypometh 1.0000e+00 4.6447e-04 weaklyHypometh 1.0000e+00 1.9676e-02 weaklyHypometh -0.11793576 6.2153e-02 insignificant 0.8514072 insignificant chr11 65904375 65905375 108197 SLC29A2 ENSG00000174669 0.846062 207 7 0.8144218 94 6 0.865385 79 7 0.8846242 145 7 0.878571 32 3 0.913658 208 7 0.789181 101 7 0.760366 57 6 0.898629 60 6 0.829620 71 6 0.886624 133 7 0.856349 44 5 0.855785 92 7 NA 0 0 0.8676008 100 7 0.914966 41 7 0.767187 85 7 0.858579 233 7 0.8805704 135 7 0.845258 166 6 0.889756 62 5 0.894558 61 7 0.880406 136 7 0.812598 66 6 0.912554 86 7 0.8570765 132 7 0.721097 83 6 0.891156 51 3 0.807143 53 5 0.773328 127 7 0.866243 128 7 0.8685313 259 7 0.8014129 52 3 0.7686201 122 7 0.6126543 77 3 0.792857 69 7 0.808672 107 7 0.8186335 108 7 0.890158 300 7 0.871830 224 7 0.9071189 245 7 0.8896388 272 7 0.9182439 304 7 0.798448 0.757052 0.802764 0.840779 0.844975 0.881787 0.757543 0.771219 0.881567 0.837889 0.848617 0.8393076 0.8134314 NA 0.833755 0.8744915 0.729082 0.8469158 0.835980 0.799770 0.855046 0.864681 0.850264 0.740854 0.880585 0.839480 0.721650 0.866715 0.755360 0.762344 0.8195555 0.821901 0.7623005 0.7198307 0.7072175 0.7223618 0.796285 0.786694 0.852384 0.831220 0.8883241 0.868840 0.892616 3 0.849256 0.824759 0.00721890 7 0.854385 0.848161 0.00622380 0.387848 0.39650840 insignificant 1 1.00000 insignificant 0.480287 4.0929e-01 insignificant 1 1.0000000 insignificant 0.0054682 0.782202 insignificant 1 insignificant 0.849256 0.7439252 0.0711682 7 0.854385 0.787025 0.0673595 2.4579e-04 9.9995e-01 weaklyHypermeth 2.9613e-03 1.0000e+00 weaklyHypermeth 7.6944e-03 9.9970e-01 weaklyHypermeth 1.0259e-01 1.0000e+00 insignificant 0.0861971 4.0704e-02 weaklyHypermeth 5.4876e-01 insignificant 0.849256 0.921933 -0.0431580 7 0.854385 0.894868 -0.0404831 9.7509e-01 6.0976e-04 weaklyHypometh 1.0000e+00 1.0163e-01 insignificant 6.6264e-01 1.3702e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -4.2059e-02 4.6624e-03 weaklyHypometh 2.1193e-01 insignificant 0.824759 0.7439252 0.0679405 7 0.848161 0.787025 0.061136 2.5150e-03 9.9795e-01 weaklyHypermeth 2.7043e-02 1.0000e+00 weaklyHypermeth 1.8816e-02 9.9881e-01 weaklyHypermeth 2.2946e-01 1.0000e+00 insignificant 0.08072885 5.4493e-02 insignificant 6.7275e-01 insignificant 0.824759 0.921933 -0.0517829 7 0.848161 0.894868 -0.04670693 9.8853e-01 2.0677e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.7449e-01 5.1764e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0475275 2.1377e-02 weaklyHypometh 0.9294543 insignificant 0.7439252 0.921933 -0.11899704 7 0.7870252 0.894868 -0.1078427 9.9999e-01 1.5153e-05 weaklyHypometh 1.0000e+00 4.2091e-04 weaklyHypometh 9.9765e-01 4.7531e-04 weaklyHypometh 1.0000e+00 1.9676e-02 weaklyHypometh -0.12825632 8.7846e-03 weaklyHypometh 0.1992720 insignificant chr11 65932984 65933984 108198 ENSG00000202317 0.017166 1363 24 0.0073703 687 21 0.011934 667 21 0.0091189 1157 21 0.011709 462 21 0.079912 1620 22 0.050346 779 24 0.058839 536 24 0.035078 740 24 0.019444 882 24 0.019612 611 21 0.037857 497 24 0.010262 596 23 0.010999 509 20 0.0073931 908 21 0.042218 500 23 0.040533 166 13 0.187844 2749 21 0.0238797 746 21 0.017220 1237 22 0.021896 479 23 0.010896 596 23 0.026956 617 24 0.013686 543 23 0.009535 784 21 0.0057692 881 21 0.037151 842 23 0.019287 432 24 0.061749 693 21 0.026088 914 21 0.025649 1078 21 0.0155117 1218 24 0.0121771 410 21 0.0037019 883 21 0.0149677 319 14 0.058824 269 14 0.040903 509 23 0.0091385 980 21 0.045021 1549 21 0.028937 1225 21 0.0055557 1016 21 0.0048491 1896 21 0.0085885 1328 23 0.013806 0.011644 0.021095 0.012430 0.017727 0.036915 0.015267 0.017512 0.030928 0.005317 0.012309 0.0082296 0.0098823 0.017881 0.010100 0.0402510 0.033249 0.0095417 0.029685 0.026731 0.023796 0.017394 0.039578 0.023315 0.013112 0.011730 0.016174 0.036070 0.018128 0.012892 0.0094974 0.022441 0.0150873 0.0059493 0.0169520 0.0024238 0.033708 0.015483 0.011302 0.014847 0.0129765 0.007816 0.013366 21 0.017402 0.017296 0.00107391 22 0.071283 0.033445 0.03783765 0.086375 0.99948610 insignificant 1 1.00000 insignificant 0.160663 9.9998e-01 insignificant 1 1.0000000 insignificant 0.0120890 0.244664 insignificant 1 insignificant 0.017088 0.0181009 0.0014145 22 0.036127 0.029415 0.0067125 1.0075e-01 9.7322e-01 insignificant 9.1587e-01 1.0000e+00 insignificant 6.2208e-02 9.9823e-01 insignificant 6.4800e-01 1.0000e+00 insignificant 0.0116514 3.7380e-01 insignificant 1.0000e+00 insignificant 0.017350 0.008982 0.0068418 21 0.070153 0.040907 0.0292464 3.0864e-02 9.9855e-01 weaklyHypermeth 7.3486e-01 1.0000e+00 insignificant 2.0444e-01 9.9817e-01 insignificant 1.0000e+00 1.000000 insignificant 1.6346e-02 1.9706e-01 insignificant 1.0000e+00 insignificant 0.017350 0.0181009 0.0012893 22 0.041806 0.029415 0.012392 7.6067e-01 7.9785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0878e-01 9.6303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00043761 9.6578e-01 insignificant 1.0000e+00 insignificant 0.017104 0.008982 0.0064863 21 0.025122 0.040907 -0.01578441 9.3366e-01 9.9552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9024e-01 9.9830e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0042575 6.5402e-01 insignificant 1.0000000 insignificant 0.0181116 0.008991 0.00610709 21 0.0316776 0.050347 -0.0186692 6.7713e-01 7.3147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9934e-01 9.1432e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00469510 7.0229e-01 insignificant 1.0000000 insignificant chr11 66242049 66243049 108202 ENSG00000210160,ENSG00000222680 0.828944 491 12 0.7179815 390 12 0.860862 279 11 0.8340905 506 12 0.802162 151 10 0.826623 621 12 0.807565 257 12 0.793687 387 12 0.825373 380 11 0.886728 332 12 0.852867 415 12 0.792391 150 10 0.880362 568 12 0.871459 157 8 0.7711971 314 11 0.761164 64 6 0.623503 115 7 0.828265 582 12 0.8754323 251 12 0.851821 581 12 0.782272 233 11 0.727974 281 12 0.839403 344 12 0.846128 254 11 0.877163 174 9 0.9106883 493 12 0.741907 307 12 0.886903 159 8 0.799434 407 12 0.855443 582 12 0.876428 521 12 0.8539006 672 12 0.6021010 388 12 0.7203896 309 11 0.9829082 168 6 0.860144 85 7 0.665731 254 11 0.7662775 503 12 0.802955 313 11 0.737516 442 12 0.8450984 369 11 0.8149249 347 11 0.7768831 410 11 0.824178 0.776551 0.864417 0.821538 0.829112 0.891957 0.819424 0.835470 0.794730 0.876633 0.830386 0.7680604 0.8612383 0.843711 0.861069 0.7566127 0.694982 0.8158547 0.842988 0.930873 0.781889 0.693213 0.865562 0.871753 0.871071 0.905763 0.766873 0.894376 0.852916 0.911942 0.8557287 0.840188 0.5523816 0.6803249 0.9185957 0.7986089 0.717963 0.683185 0.770917 0.666149 0.8210975 0.792900 0.749422 9 0.852954 0.866923 -0.01034289 12 0.761398 0.786310 -0.02491282 0.899129 0.12867382 insignificant 1 1.00000 insignificant 0.983608 2.6645e-02 weaklyHypometh 1 1.0000000 insignificant -0.0185131 0.403924 insignificant 1 insignificant 0.853198 0.7697715 0.0904090 12 0.819967 0.712752 0.1072148 5.2171e-12 9.7585e-01 weaklyHypermeth 1.3043e-10 1.0000e+00 weaklyHypermeth 1.1835e-03 8.6857e-01 weaklyHypermeth 1.8785e-02 1.0000e+00 weaklyHypermeth 0.0483655 4.3795e-01 insignificant 1.0000e+00 insignificant 0.853278 0.758107 0.0862216 11 0.789197 0.801983 -0.0127857 2.3573e-06 9.9255e-01 weaklyHypermeth 1.5715e-04 1.0000e+00 weaklyHypermeth 1.6845e-03 9.6302e-01 weaklyHypermeth 8.4225e-02 1.000000 weaklyHypermeth 1.9148e-02 4.2413e-01 insignificant 1.0000e+00 insignificant 0.867361 0.7697715 0.0985356 12 0.798719 0.712752 0.085967 7.0609e-10 9.8934e-01 weaklyHypermeth 1.7222e-08 1.0000e+00 weaklyHypermeth 2.3598e-03 9.8390e-01 weaklyHypermeth 3.7456e-02 1.0000e+00 weaklyHypermeth 0.06687864 2.9855e-01 insignificant 1.0000e+00 insignificant 0.867903 0.758107 0.0943009 11 0.846796 0.801983 0.04481269 1.2507e-06 9.9782e-01 weaklyHypermeth 7.8170e-05 1.0000e+00 weaklyHypermeth 3.1682e-04 9.9619e-01 weaklyHypermeth 1.9801e-02 1.000000 weaklyHypermeth 0.0376615 1.5597e-01 insignificant 1.0000000 insignificant 0.7709924 0.757979 -0.01248504 11 0.7513145 0.785482 -0.0341672 1.9146e-01 6.3841e-03 weaklyHypometh 1.0000e+00 8.2911e-02 weaklyHypometh 4.1403e-01 7.7134e-02 insignificant 1.0000e+00 8.9691e-01 insignificant -0.02921714 6.3862e-01 insignificant 1.0000000 insignificant chr11 66411021 66412021 108206 PC ENSG00000173599 0.899458 165 9 0.8428671 301 9 0.892583 224 8 0.9623296 171 8 0.949352 154 8 0.930500 314 9 0.879692 201 9 0.874873 270 9 0.911297 156 7 0.948092 152 7 0.936862 347 9 0.945301 131 6 0.914930 199 7 0.912946 39 3 0.9340092 192 9 0.923818 107 7 0.895833 47 3 0.829683 115 6 0.9281631 190 6 0.938153 194 9 0.884404 112 6 0.905720 95 7 0.917600 205 9 0.808421 99 9 0.911357 371 6 0.8958443 296 9 0.911464 107 9 0.929842 101 7 0.944003 173 6 0.929814 353 9 0.914407 337 9 0.9101471 245 9 0.7156585 273 9 0.8056980 207 8 1.0000000 59 5 0.687799 189 6 0.723225 161 9 0.8604267 333 9 0.819300 152 8 0.840743 211 6 0.9105820 135 9 0.9219907 132 6 0.8955592 107 7 0.875327 0.787888 0.872247 0.948977 0.908359 0.932318 0.875690 0.860317 0.921943 0.936637 0.936852 0.8920217 0.8918374 0.923574 0.929150 0.9013915 0.923983 0.9507852 0.904306 0.932809 0.852919 0.885886 0.926069 0.838063 0.916359 0.917396 0.834246 0.925400 0.971262 0.930187 0.8985706 0.905401 0.6298685 0.9048488 0.9857295 0.6723955 0.805176 0.830820 0.859797 0.893490 0.9424891 0.913692 0.828180 2 0.903878 0.912956 -0.01075922 9 0.923574 0.824070 0.09950450 0.020328 0.11699416 inconclusive 1 1.00000 insignificant 0.035181 4.1581e-01 inconclusive 1 1.0000000 insignificant 0.0072850 0.570422 insignificant 1 insignificant 0.903878 0.8158756 0.0759114 9 0.923574 0.739736 0.1838378 5.6838e-07 9.9641e-01 weaklyHypermeth 8.6118e-06 1.0000e+00 weaklyHypermeth 3.7320e-04 9.8803e-01 weaklyHypermeth 8.1130e-03 1.0000e+00 weaklyHypermeth 0.1137359 6.4080e-02 insignificant 7.6480e-01 insignificant 0.903799 0.876526 0.0222446 8 0.915083 0.885347 0.0297350 6.1532e-02 9.4814e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1890e-01 9.5106e-01 insignificant 1.0000e+00 1.000000 insignificant 3.4902e-02 1.6480e-01 insignificant 1.0000e+00 insignificant 0.912956 0.8158756 0.0930459 9 0.824070 0.739736 0.084333 2.0568e-04 9.9993e-01 weaklyHypermeth 2.6370e-03 1.0000e+00 weaklyHypermeth 7.3725e-02 9.9695e-01 insignificant 7.4470e-01 1.0000e+00 insignificant 0.10645096 7.7860e-02 insignificant 8.2830e-01 insignificant 0.913323 0.876526 0.0343933 8 0.915633 0.885347 0.03028560 2.2257e-04 5.3083e-01 weaklyHypermeth 1.0117e-02 1.0000e+00 weaklyHypermeth 6.4491e-02 5.8293e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0276172 2.6485e-01 insignificant 1.0000000 insignificant 0.8172131 0.876526 -0.05328985 8 0.8219294 0.885347 -0.0634180 7.4294e-01 1.2636e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2963e-01 3.1550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07883377 1.7628e-01 insignificant 1.0000000 insignificant chr11 66894028 66895028 108217 ENSG00000201684 0.395638 275 9 0.3201710 208 8 0.357641 199 9 0.4348174 214 8 0.299772 98 7 0.290167 306 9 0.458715 117 8 0.333357 217 9 0.407410 186 9 0.393882 170 9 0.427343 240 9 0.396958 95 8 0.464052 253 9 NA 0 0 0.3219775 182 8 0.150265 65 7 0.271468 97 8 0.253061 252 8 0.4980131 161 8 0.200919 330 9 0.535982 106 7 0.135613 189 8 0.382146 118 6 0.364923 98 7 0.341021 91 6 0.3748846 269 9 0.431231 142 9 0.321383 55 5 0.301904 176 7 0.260059 247 9 0.507863 261 9 0.5805734 394 9 0.1353238 175 6 0.0738870 180 9 0.0000000 80 4 0.000000 115 8 0.264316 86 6 0.0185249 386 9 0.177006 287 8 0.152369 367 9 0.2593384 230 8 0.1043816 337 8 0.1263832 203 6 0.436797 0.343952 0.367692 0.388458 0.305926 0.303024 0.364039 0.347904 0.365030 0.393363 0.444713 0.3775897 0.5057570 NA 0.218156 0.2479901 0.319014 0.2766081 0.422813 0.203456 0.499474 0.145643 0.324679 0.403302 0.335910 0.360037 0.451362 0.297466 0.357912 0.263757 0.4685941 0.615876 0.1444211 0.0714832 0.0281779 0.0000000 0.307447 0.014285 0.149581 0.150803 0.1862871 0.095383 0.137593 5 0.343793 0.407269 -0.05500765 8 0.350196 0.412473 -0.06227671 0.998921 0.00645238 weaklyHypometh 1 0.68003 insignificant 0.739591 3.3835e-01 insignificant 1 1.0000000 insignificant -0.0267831 0.527825 insignificant 1 insignificant 0.343793 0.0655577 0.2816156 8 0.350196 0.063885 0.2863109 6.3920e-21 1.0000e+00 hypermethylated 3.9950e-19 1.0000e+00 hypermethylated 1.9620e-13 1.0000e+00 hypermethylated 6.5399e-11 1.0000e+00 hypermethylated 0.2693401 5.2298e-04 hypermethylated 2.1791e-02 hypermethylated 0.343793 0.133427 0.2078732 8 0.350196 0.165856 0.1843400 7.8084e-12 1.0000e+00 hypermethylated 1.1155e-09 1.0000e+00 hypermethylated 1.0769e-09 1.0000e+00 hypermethylated 3.3362e-07 1.000000 hypermethylated 1.8745e-01 2.9261e-04 weaklyHypermeth 2.7362e-02 weaklyHypermeth 0.407269 0.0655577 0.3352483 8 0.412473 0.063885 0.348588 1.8271e-19 1.0000e+00 hypermethylated 2.2838e-17 1.0000e+00 hypermethylated 7.0104e-11 1.0000e+00 hypermethylated 1.7526e-08 1.0000e+00 hypermethylated 0.29612313 1.7750e-04 hypermethylated 8.8752e-03 hypermethylated 0.407269 0.133427 0.2606992 8 0.412473 0.165856 0.24661672 1.0692e-12 1.0000e+00 hypermethylated 2.6729e-10 1.0000e+00 hypermethylated 1.4601e-08 1.0000e+00 hypermethylated 4.8671e-06 1.000000 hypermethylated 0.2142360 2.6665e-04 hypermethylated 0.0348781 hypermethylated 0.0655577 0.133427 -0.07178910 8 0.0638852 0.165856 -0.1019709 9.9990e-01 8.6197e-06 weaklyHypometh 1.0000e+00 2.7805e-04 weaklyHypometh 9.9998e-01 1.0203e-03 weaklyHypometh 1.0000e+00 3.1883e-02 weaklyHypometh -0.08188710 1.3969e-01 insignificant 1.0000000 insignificant chr11 66942075 66943075 108223 ATPGD1 ENSG00000172508 0.866634 498 15 0.7632189 366 15 0.701871 420 15 0.9168929 468 15 0.832043 222 12 0.871972 628 15 0.800328 288 15 0.830145 346 15 0.892739 433 15 0.915418 368 15 0.871231 523 15 0.855792 262 14 0.853232 486 15 0.840144 159 7 0.8825414 334 15 0.813889 208 9 0.855597 159 7 0.833107 519 15 0.9110851 313 15 0.882325 507 15 0.780805 255 14 0.684745 231 15 0.900134 368 15 0.694312 230 13 0.874289 172 15 0.8860923 466 15 0.662551 276 15 0.705554 267 11 0.830035 357 15 0.898752 461 15 0.867569 421 15 0.8859981 715 15 0.5425816 397 15 0.4485983 305 15 0.7698424 538 13 0.746260 129 11 0.734954 355 15 0.7348486 469 15 0.823028 412 15 0.754432 561 14 0.8147181 374 15 0.8315122 532 14 0.8157652 418 15 0.880476 0.776149 0.804332 0.922345 0.881324 0.899155 0.835974 0.905071 0.897400 0.903787 0.883905 0.8564315 0.8764085 0.876671 0.906000 0.8248078 0.870042 0.8532071 0.917620 0.898789 0.897628 0.816564 0.905828 0.870757 0.888749 0.895216 0.821529 0.856841 0.874113 0.913863 0.8968251 0.901369 0.6043205 0.4284653 0.8023055 0.7394881 0.864417 0.774514 0.839614 0.831541 0.8389549 0.880927 0.783609 12 0.871320 0.873430 -0.00964524 15 0.844353 0.740147 0.10420596 0.823968 0.31909477 insignificant 1 1.00000 insignificant 0.242749 5.8435e-01 insignificant 1 1.0000000 insignificant 0.0436074 0.161533 insignificant 1 insignificant 0.871320 0.7090743 0.1690636 15 0.844353 0.578671 0.2656821 1.1596e-18 9.7918e-01 weaklyHypermeth 5.2710e-17 1.0000e+00 weaklyHypermeth 2.2998e-06 9.0490e-01 weaklyHypermeth 9.1991e-05 1.0000e+00 weaklyHypermeth 0.1866629 1.7786e-02 weaklyHypermeth 3.0666e-01 insignificant 0.871320 0.834131 0.0384199 15 0.844353 0.784777 0.0595759 3.6246e-03 9.9373e-01 weaklyHypermeth 1.3164e-01 1.0000e+00 insignificant 1.0861e-02 9.6995e-01 weaklyHypermeth 4.2922e-01 1.000000 insignificant 4.1619e-02 4.1791e-02 weaklyHypermeth 1.0000e+00 insignificant 0.873430 0.7090743 0.1761076 15 0.740147 0.578671 0.161476 1.4839e-13 9.9943e-01 weaklyHypermeth 7.8102e-12 1.0000e+00 weaklyHypermeth 2.1314e-04 9.9037e-01 weaklyHypermeth 4.5517e-03 1.0000e+00 weaklyHypermeth 0.14305548 4.8506e-02 weaklyHypermeth 6.1400e-01 insignificant 0.873430 0.834131 0.0498937 15 0.740147 0.784777 -0.04463003 3.0703e-04 9.6345e-01 weaklyHypermeth 1.2793e-02 1.0000e+00 weaklyHypermeth 4.2099e-03 9.9738e-01 weaklyHypermeth 1.7541e-01 1.000000 insignificant -0.0019882 9.4886e-01 insignificant 1.0000000 insignificant 0.7090743 0.834131 -0.10883933 15 0.5786708 0.784777 -0.2061062 9.6979e-01 5.8559e-04 weaklyHypometh 1.0000e+00 9.1499e-03 weaklyHypometh 7.6528e-01 4.2472e-02 weaklyHypometh 1.0000e+00 5.7157e-01 insignificant -0.14504372 4.4283e-02 weaklyHypometh 0.6709529 insignificant chr11 67237426 67238426 108228 ALDH3B2 ENSG00000132746 0.269265 535 14 0.2428913 502 14 0.268889 437 14 0.2898637 491 14 0.300649 455 14 0.323163 738 14 0.267292 357 14 0.278097 461 14 0.244247 459 14 0.261419 370 14 0.342302 546 14 0.198157 349 14 0.285474 511 14 0.234621 324 14 0.2481683 569 14 0.275715 212 10 0.269477 100 6 0.280095 504 14 0.3220790 570 14 0.251813 478 14 0.310522 130 10 0.272018 311 14 0.356561 329 14 0.338742 178 14 0.347384 214 14 0.2863814 648 14 0.260355 360 14 0.276841 267 13 0.284757 502 14 0.251340 854 14 0.274344 689 14 0.3739241 567 14 0.1977179 468 14 0.1649090 186 13 0.3305487 391 12 0.161538 58 7 0.244108 491 14 0.2089108 561 14 0.221201 661 14 0.293651 348 14 0.2474807 518 14 0.1840225 317 14 0.2984903 538 14 0.184505 0.170830 0.193435 0.182171 0.239665 0.250848 0.208304 0.201752 0.182385 0.190931 0.265183 0.1956811 0.1646397 0.203692 0.173151 0.2238550 0.174787 0.1772919 0.217552 0.145180 0.240456 0.163770 0.281254 0.222708 0.236475 0.195815 0.146137 0.173879 0.202198 0.143019 0.1856060 0.314908 0.0921637 0.0910506 0.2514803 0.0657129 0.112576 0.110446 0.136531 0.174537 0.1540337 0.106927 0.194617 10 0.197703 0.201151 0.00232702 14 0.298909 0.316684 -0.01777494 0.850276 0.04811615 inconclusive 1 1.00000 insignificant 0.824202 2.7324e-02 inconclusive 1 1.0000000 insignificant -0.0300802 0.045212 weaklyHypometh 1 insignificant 0.197703 0.1415313 0.0885930 14 0.298909 0.262726 0.0361826 9.6273e-11 1.2971e-01 weaklyHypermeth 2.0484e-09 1.0000e+00 weaklyHypermeth 9.2974e-10 7.7923e-01 weaklyHypermeth 1.0330e-07 1.0000e+00 weaklyHypermeth 0.0547284 8.8102e-02 insignificant 9.8991e-01 insignificant 0.197501 0.152037 0.0481253 14 0.284545 0.257761 0.0267840 8.4918e-03 9.1220e-01 weaklyHypermeth 2.4976e-01 1.0000e+00 insignificant 1.1160e-02 6.6451e-01 weaklyHypermeth 4.2922e-01 1.000000 insignificant 2.3715e-02 3.4932e-01 insignificant 1.0000e+00 insignificant 0.201151 0.1415313 0.0887490 14 0.316684 0.262726 0.053958 1.4967e-09 9.0835e-01 weaklyHypermeth 3.4016e-08 1.0000e+00 weaklyHypermeth 4.3795e-10 9.9315e-01 weaklyHypermeth 6.2565e-08 1.0000e+00 weaklyHypermeth 0.08480861 1.9445e-02 weaklyHypermeth 3.1732e-01 insignificant 0.200436 0.151973 0.0457069 14 0.276684 0.240577 0.03610667 2.1061e-02 9.9701e-01 weaklyHypermeth 5.0145e-01 1.0000e+00 insignificant 2.0207e-02 9.9570e-01 weaklyHypermeth 5.7734e-01 1.000000 insignificant 0.0537951 6.9160e-02 insignificant 1.0000000 insignificant 0.1411328 0.152037 -0.04049328 14 0.2100636 0.257761 -0.0476973 5.1987e-01 1.1353e-06 weaklyHypometh 1.0000e+00 4.7304e-05 weaklyHypometh 9.3554e-01 6.8111e-05 weaklyHypometh 1.0000e+00 4.8650e-03 weaklyHypometh -0.03101351 3.8110e-01 insignificant 1.0000000 insignificant chr11 68801790 68802790 108252 TPCN2 ENSG00000162341 0.858005 146 5 0.6590781 187 5 0.635875 158 5 0.6528035 161 5 0.587868 122 5 0.586621 327 5 0.626311 164 5 0.570443 128 5 0.650353 115 5 0.761315 119 4 0.797285 169 5 0.822120 80 5 0.500171 115 4 0.727988 76 5 0.5825397 130 4 0.511780 67 5 0.666667 58 2 0.654763 173 5 0.5133961 262 5 0.696008 205 5 0.845891 100 5 0.756061 47 5 0.664021 143 5 0.668171 131 6 0.827778 71 3 0.7537873 249 5 0.705730 161 5 0.713759 100 5 0.635625 195 5 0.630052 247 5 0.791643 268 5 0.8512557 226 5 0.7678998 177 5 0.5423015 179 5 0.6848684 331 5 0.478632 40 2 0.566815 171 6 0.6262406 293 5 0.712442 248 5 0.610170 166 5 0.4765812 111 5 0.6066076 243 5 0.6256532 115 4 0.802338 0.660227 0.745643 0.728325 0.619809 0.720734 0.766096 0.706001 0.713935 0.774200 0.799879 0.8463283 0.6808486 0.771688 0.666224 0.5170853 0.889294 0.7202755 0.647757 0.728838 0.894538 0.894057 0.835078 0.870177 0.898865 0.773578 0.753462 0.841905 0.798478 0.700318 0.8213387 0.887122 0.7835872 0.8118137 0.8193560 0.6852425 0.698517 0.750797 0.722094 0.615006 0.5678908 0.596059 0.663528 4 0.719784 0.786267 -0.08722674 5 0.545293 0.614317 -0.06902380 0.996553 0.00023190 weaklyHypometh 1 0.11595 insignificant 0.999924 1.8491e-05 weaklyHypometh 1 0.0092453 weaklyHypometh -0.0839116 0.014917 lowCoverage 1 lowCoverage 0.719932 0.7044500 -0.0302861 5 0.550955 0.492404 0.0585512 2.2311e-01 8.0614e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4473e-01 1.7234e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0419431 4.1003e-01 lowCoverage 1.0000e+00 lowCoverage 0.720325 0.644394 0.0838948 5 0.582044 0.674429 -0.0923853 5.9513e-03 5.8548e-01 weaklyHypermeth 1.9198e-01 1.0000e+00 insignificant 2.8639e-02 7.7853e-01 weaklyHypermeth 8.5027e-01 1.000000 insignificant 4.6779e-02 3.2222e-01 lowCoverage 1.0000e+00 lowCoverage 0.786970 0.7044500 0.0626393 5 0.649440 0.492404 0.157036 3.0373e-03 9.2157e-01 weaklyHypermeth 3.2312e-02 1.0000e+00 weaklyHypermeth 1.4492e-02 9.8749e-01 weaklyHypermeth 1.8580e-01 1.0000e+00 insignificant 0.12585475 3.1616e-02 lowCoverage 4.4530e-01 lowCoverage 0.787675 0.644394 0.1839796 5 0.694598 0.674429 0.02016908 3.8311e-07 9.2573e-01 weaklyHypermeth 3.4828e-05 1.0000e+00 weaklyHypermeth 2.3828e-06 9.9541e-01 weaklyHypermeth 3.4039e-04 1.000000 weaklyHypermeth 0.1306903 2.0640e-02 lowCoverage 0.9294543 lowCoverage 0.7050420 0.644394 0.11309798 5 0.5627470 0.674429 -0.1116820 4.7804e-02 9.2152e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.3772e-01 9.0346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00483551 9.3417e-01 lowCoverage 1.0000000 lowCoverage chr11 69507318 69508318 108263 FGF3 ENSG00000186895 0.203884 248 7 0.1151988 426 7 0.148721 295 8 0.0805449 175 7 0.082772 259 7 0.168391 461 7 0.077948 275 7 0.101201 308 7 0.061292 353 7 0.110322 241 8 0.100931 334 7 0.108184 170 7 0.027757 208 7 0.072391 184 7 0.0548487 335 7 0.127997 208 8 0.034648 53 3 0.137413 224 7 0.0066673 279 7 0.183845 384 7 0.108818 95 7 0.105556 96 6 0.136695 181 7 0.023199 168 7 0.063095 78 6 0.0442649 375 7 0.079817 255 7 0.089644 189 7 0.054726 296 7 0.028557 476 7 0.040416 340 7 0.1526534 373 7 0.0342971 287 7 0.0071429 99 5 0.0357143 83 4 0.041667 14 1 0.106053 277 7 0.0143412 311 7 0.170961 323 7 0.120196 266 7 0.1213856 159 6 0.0593974 141 5 0.1026333 189 7 0.229416 0.065403 0.171178 0.098313 0.084768 0.205868 0.083322 0.131103 0.069253 0.157460 0.151980 0.1374060 0.0372809 0.116637 0.063997 0.1606639 0.042851 0.1788031 0.011401 0.079599 0.148149 0.118477 0.188817 0.042194 0.085360 0.060053 0.108154 0.092463 0.070050 0.047326 0.0502041 0.190014 0.0313581 0.0124688 0.0338363 0.0340678 0.141906 0.019542 0.122439 0.102030 0.1209334 0.058503 0.108888 5 0.109868 0.085420 0.02275797 7 0.188406 0.060500 0.12790598 0.048287 0.99993124 weaklyHypermeth 1 1.00000 insignificant 0.138698 9.9759e-01 insignificant 1 1.0000000 insignificant 0.0229611 0.183663 insignificant 1 insignificant 0.109701 0.0505145 0.0514096 7 0.086957 0.041971 0.0449860 1.5992e-03 9.0885e-01 weaklyHypermeth 1.7196e-02 1.0000e+00 weaklyHypermeth 3.5656e-03 9.9649e-01 weaklyHypermeth 5.0303e-02 1.0000e+00 weaklyHypermeth 0.0603786 6.4235e-03 weaklyHypermeth 1.2847e-01 insignificant 0.110004 0.132653 -0.0013273 7 0.092890 0.169744 -0.0768538 3.2666e-01 3.0188e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.7452e-01 1.4168e-01 insignificant 1.0000e+00 1.000000 insignificant -1.4667e-02 5.1253e-01 insignificant 1.0000e+00 insignificant 0.085303 0.0504202 0.0297327 7 0.060500 0.037308 0.023193 2.4899e-01 8.7573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3498e-01 9.9899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03741757 6.9947e-02 insignificant 8.0697e-01 insignificant 0.085538 0.131086 -0.0223304 7 0.077786 0.111099 -0.03331271 9.4301e-01 4.0117e-03 weaklyHypometh 1.0000e+00 9.3349e-01 insignificant 8.7143e-01 5.8748e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0376278 1.2147e-01 insignificant 1.0000000 insignificant 0.0507996 0.131086 -0.05376678 7 0.0479671 0.111099 -0.0631319 9.8755e-01 1.8189e-04 weaklyHypometh 1.0000e+00 3.1910e-03 weaklyHypometh 9.9856e-01 4.5205e-03 weaklyHypometh 1.0000e+00 9.2255e-02 weaklyHypometh -0.07504541 1.1216e-02 weaklyHypometh 0.2243119 insignificant chr11 70059601 70060601 108267 CTTN ENSG00000085733 0.835920 79 3 0.6635561 60 4 0.773061 52 3 0.9361616 63 4 0.592000 34 2 0.935340 201 4 0.961538 52 2 0.913636 103 4 0.872381 39 4 0.966667 36 2 0.772833 181 5 0.900000 18 1 0.900000 74 4 0.958003 59 4 0.7250000 29 1 1.000000 24 2 0.000000 1 0 0.823502 51 3 0.9494614 122 5 0.848680 158 2 0.541295 46 4 1.000000 23 2 0.593246 67 2 1.000000 37 2 0.963636 25 3 0.9458685 115 5 0.815682 91 5 0.485294 25 2 0.818865 117 5 0.736941 134 5 0.905142 114 5 0.9269140 155 4 0.3745513 77 5 0.6761032 95 5 0.8125000 92 2 NA 0 0 0.466972 111 6 0.7151956 156 5 0.475334 127 2 0.843601 128 4 0.9000000 49 2 0.4345238 42 2 0.8200980 64 2 0.953474 0.638999 0.799175 0.907381 0.968955 0.946578 0.880597 0.858887 0.815210 0.948259 0.834968 0.8447761 1.0000000 0.956882 0.883582 1.0000000 NA 0.8609258 0.963770 0.965290 0.951493 0.990893 0.871870 1.000000 1.000000 0.873134 0.837556 0.954346 0.837577 0.843510 0.8198090 0.949052 0.6895522 0.5846378 0.7089552 NA 0.648653 0.777835 0.923520 0.938930 1.0000000 0.907338 0.965979 1 0.890592 0.881481 0.00091916 5 0.832985 0.813406 0.01957873 0.630986 0.87129384 insignificant 1 1.00000 insignificant 0.743285 9.5487e-01 insignificant 1 1.0000000 insignificant 0.0053133 0.941878 lowCoverage 1 lowCoverage 0.891473 0.6735849 0.2064957 5 0.809026 0.584586 0.2244401 3.5534e-10 9.9997e-01 hypermethylated 7.1067e-09 1.0000e+00 hypermethylated 4.3175e-06 9.9997e-01 hypermethylated 1.4888e-04 1.0000e+00 hypermethylated 0.2073224 6.4243e-02 lowCoverage 7.6480e-01 lowCoverage 0.890592 0.909756 -0.0038280 2 0.832985 0.639966 0.1930193 1.9335e-01 9.6113e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8138e-01 9.8075e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 1.2168e-01 3.1229e-01 lowCoverage 1.0000e+00 lowCoverage 0.881537 0.6735849 0.1997097 5 0.804866 0.584586 0.220280 5.0163e-08 9.9973e-01 weaklyHypermeth 9.6468e-07 1.0000e+00 weaklyHypermeth 5.0870e-05 9.9985e-01 weaklyHypermeth 1.4534e-03 1.0000e+00 weaklyHypermeth 0.20200912 7.2602e-02 lowCoverage 8.1705e-01 lowCoverage 0.881481 0.909756 0.0024647 2 0.813406 0.639966 0.17344053 3.7013e-01 9.3859e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.6393e-01 9.8039e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.1163622 3.3697e-01 lowCoverage 1.0000000 lowCoverage 0.6735849 0.910891 -0.20425368 2 0.5845860 0.628522 -0.0439364 8.9714e-01 4.0818e-04 lowCoverage 1.0000e+00 6.9183e-03 lowCoverage 8.7120e-01 4.8673e-02 lowCoverage 1.0000e+00 6.3211e-01 lowCoverage -0.08564696 5.2326e-01 lowCoverage 1.0000000 lowCoverage chr11 70183545 70184545 108270 CTTN ENSG00000085733 0.955528 120 5 0.9232955 86 5 0.804719 121 5 0.9670034 57 2 0.967619 63 5 0.851560 198 5 0.956836 86 5 0.865000 71 5 0.891116 115 5 0.960519 115 5 0.910621 135 5 0.907500 55 4 0.937685 130 5 0.861111 30 2 0.9194737 85 5 0.881352 44 5 0.808485 38 3 0.868212 74 3 0.9904762 51 5 0.927610 142 5 0.978947 71 5 0.975000 37 3 0.945000 121 5 0.980000 81 5 1.000000 29 3 0.9134964 99 5 0.943485 63 5 0.910352 86 5 0.921212 52 5 0.907851 91 5 0.942478 109 5 0.9553305 247 5 0.7309524 110 5 0.5635611 64 4 0.8507079 89 4 0.573654 40 4 0.600381 110 5 0.7755723 82 5 0.962436 119 5 0.937515 83 5 0.9617778 54 3 0.9945946 88 5 0.9418704 86 5 0.938456 0.892080 0.816671 0.946913 0.940578 0.847014 0.930301 0.801380 0.909423 0.937651 0.919019 0.9611196 0.8846853 0.884014 0.929168 0.8613769 0.781279 0.8047938 0.976629 0.927675 0.979981 0.938650 0.938348 0.993252 1.000000 0.863008 0.909240 0.910446 0.856758 0.901493 0.9229684 0.944063 0.6920099 0.4848150 0.7148858 0.5236432 0.691732 0.744893 0.943905 0.948690 0.9396046 0.986735 0.926296 3 0.900881 0.935543 -0.03112474 5 0.909434 0.942653 -0.03321865 0.997891 0.00258690 weaklyHypometh 1 0.36956 insignificant 0.997642 6.7966e-03 weaklyHypometh 1 0.9331354 insignificant -0.0399766 0.011321 lowCoverage 1 lowCoverage 0.900881 0.6808081 0.2167760 5 0.909434 0.718868 0.1905667 3.7853e-13 1.0000e+00 hypermethylated 1.1829e-11 1.0000e+00 hypermethylated 1.4926e-07 9.9964e-01 hypermethylated 8.7802e-06 1.0000e+00 hypermethylated 0.2253147 5.0242e-03 lowCoverage 1.0467e-01 lowCoverage 0.900881 0.953488 -0.0560310 5 0.909434 0.961113 -0.0516784 9.9955e-01 5.4935e-03 weaklyHypometh 1.0000e+00 4.5779e-01 insignificant 9.9821e-01 1.7112e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -5.1853e-02 4.1820e-03 lowCoverage 2.0910e-01 lowCoverage 0.935543 0.6808081 0.2449360 5 0.942653 0.718868 0.223785 5.1199e-12 1.0000e+00 hypermethylated 1.7655e-10 1.0000e+00 hypermethylated 4.3890e-08 1.0000e+00 hypermethylated 2.9260e-06 1.0000e+00 hypermethylated 0.26529124 2.5697e-03 lowCoverage 6.4243e-02 lowCoverage 0.935543 0.953488 -0.0274553 5 0.942653 0.961113 -0.01845973 7.2814e-01 2.0772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6849e-01 4.1277e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0118759 3.9772e-01 lowCoverage 1.0000000 lowCoverage 0.6808081 0.953488 -0.27804035 5 0.7188677 0.961113 -0.2422450 1.0000e+00 4.6285e-07 hypomethylated 1.0000e+00 2.4361e-05 hypomethylated 9.9999e-01 1.6173e-05 hypomethylated 1.0000e+00 2.3104e-03 hypomethylated -0.27716718 2.0328e-03 lowCoverage 0.0784540 lowCoverage chr11 71430121 71431121 108289 IL18BP ENSG00000137496 0.124986 161 7 0.2604628 348 7 0.206729 221 7 0.1880952 91 7 0.211023 153 7 0.327292 234 7 0.299186 261 7 0.149157 190 7 0.242868 191 7 0.307194 117 7 0.342253 264 7 0.368953 108 7 0.078057 132 7 0.228571 55 5 0.1613829 169 7 0.313522 137 7 0.070513 69 3 0.088004 92 7 0.0852523 176 7 0.098083 310 7 0.430584 119 6 0.024631 63 3 0.302168 188 7 0.136633 172 7 0.343277 50 6 0.1398896 293 7 0.227726 117 7 0.162141 149 7 0.212510 180 7 0.161057 311 7 0.126055 325 7 0.4642058 334 7 0.0145415 163 7 0.0146291 186 7 0.0045455 86 5 0.000000 42 3 0.052095 196 7 0.0071429 274 7 0.028336 290 7 0.020675 231 7 0.0068027 102 5 0.0688209 151 4 0.0260379 152 7 0.187337 0.203190 0.189609 0.231356 0.209908 0.300992 0.283567 0.132034 0.217483 0.265279 0.295875 0.2403038 0.0722198 0.219720 0.138721 0.2212622 0.131903 0.1125010 0.070776 0.107893 0.394919 0.084746 0.243658 0.128839 0.351728 0.144371 0.207241 0.180732 0.226614 0.131336 0.0971070 0.488734 0.0204690 0.0157577 0.0156112 0.0023293 0.109838 0.024576 0.047162 0.017127 0.0056497 0.053740 0.042932 3 0.213855 0.228596 -0.01333065 7 0.225831 0.229003 -0.00317175 0.607348 0.42918718 insignificant 1 1.00000 insignificant 0.874050 4.5832e-01 insignificant 1 1.0000000 insignificant -0.0199939 0.655043 insignificant 1 insignificant 0.213855 0.0295671 0.1846677 7 0.225831 0.019543 0.2062886 3.0274e-16 1.0000e+00 weaklyHypermeth 1.1644e-14 1.0000e+00 weaklyHypermeth 8.5954e-11 1.0000e+00 weaklyHypermeth 1.2279e-08 1.0000e+00 weaklyHypermeth 0.1920870 2.6507e-08 weaklyHypermeth 5.3015e-06 weaklyHypermeth 0.213855 0.028078 0.1780871 7 0.225831 0.025334 0.2004972 1.8700e-15 1.0000e+00 weaklyHypermeth 4.6751e-13 1.0000e+00 weaklyHypermeth 1.3345e-09 1.0000e+00 weaklyHypermeth 3.3362e-07 1.000000 weaklyHypermeth 1.7744e-01 1.8855e-07 weaklyHypermeth 6.2849e-05 weaklyHypermeth 0.228596 0.0295671 0.2000465 7 0.229003 0.019543 0.209460 3.4676e-10 1.0000e+00 hypermethylated 8.8912e-09 1.0000e+00 hypermethylated 1.1752e-10 1.0000e+00 hypermethylated 1.9586e-08 1.0000e+00 hypermethylated 0.21208090 1.5518e-04 hypermethylated 8.8752e-03 hypermethylated 0.228596 0.028078 0.1937572 7 0.229003 0.025334 0.20366899 1.2341e-09 1.0000e+00 weaklyHypermeth 1.5426e-07 1.0000e+00 weaklyHypermeth 9.6257e-10 1.0000e+00 weaklyHypermeth 4.8128e-07 1.000000 weaklyHypermeth 0.1974388 2.7903e-04 weaklyHypermeth 0.0348781 weaklyHypermeth 0.0295671 0.028078 0.00265329 7 0.0195426 0.025334 -0.0057914 9.4120e-01 5.7603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9464e-01 4.6608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01464213 2.9051e-01 insignificant 1.0000000 insignificant chr11 71797024 71798024 108319 ENSG00000213365 0.627466 202 6 0.5730042 192 6 0.542102 172 7 0.5463092 186 6 0.697184 160 6 0.616574 361 7 0.592594 226 6 0.591628 176 6 0.534840 148 7 0.471428 158 6 0.550587 279 6 0.647526 107 6 0.526115 156 7 0.611224 87 6 0.6973191 167 6 0.647671 131 6 0.675433 94 7 0.504980 166 7 0.5612130 161 6 0.602535 269 7 0.722565 84 7 0.612585 89 6 0.601251 144 6 0.773718 74 6 0.568835 98 6 0.6754081 253 6 0.741334 81 6 0.643162 82 7 0.650385 180 6 0.590774 248 7 0.563652 236 7 0.6518885 317 7 0.6023229 224 7 0.4728625 195 7 0.5659284 136 6 0.666667 39 4 0.673448 125 6 0.6053503 268 7 0.617253 209 6 0.601327 216 7 0.5028776 151 6 0.6043270 150 6 0.5645118 168 6 0.646245 0.588677 0.589376 0.702555 0.670200 0.685753 0.610200 0.601304 0.617271 0.640017 0.678343 0.6609640 0.5963575 0.649128 0.691295 0.7252499 0.661777 0.5960780 0.624917 0.708869 0.737088 0.658724 0.633157 0.724082 0.660067 0.667372 0.743992 0.649287 0.637740 0.611616 0.5792748 0.708260 0.5949434 0.5360923 0.5465927 0.6212121 0.616759 0.608626 0.650933 0.655910 0.6140350 0.590194 0.577380 6 0.648138 0.653234 -0.00092160 6 0.559570 0.633185 -0.07361455 0.810374 0.20781354 insignificant 1 1.00000 insignificant 0.898176 4.0097e-02 weaklyHypometh 1 1.0000000 insignificant -0.0587432 0.023650 weaklyHypometh 1 insignificant 0.648138 0.5775076 0.0750131 6 0.559570 0.617540 -0.0579698 1.8304e-04 6.9327e-01 weaklyHypermeth 2.2322e-03 1.0000e+00 weaklyHypermeth 1.0827e-02 5.4889e-01 weaklyHypermeth 1.3881e-01 1.0000e+00 insignificant -0.0068764 8.4160e-01 insignificant 1.0000e+00 insignificant 0.648138 0.630872 0.0206675 6 0.559570 0.519672 0.0398980 2.0823e-01 3.2921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2353e-01 4.3959e-01 insignificant 1.0000e+00 1.000000 insignificant 1.2827e-02 6.2215e-01 insignificant 1.0000e+00 insignificant 0.653234 0.5775076 0.0744455 6 0.633185 0.617540 0.015645 4.9690e-04 8.8071e-01 weaklyHypermeth 6.0597e-03 1.0000e+00 weaklyHypermeth 2.6505e-03 9.1411e-01 weaklyHypermeth 4.0776e-02 1.0000e+00 weaklyHypermeth 0.05186680 1.8145e-01 insignificant 1.0000e+00 insignificant 0.653234 0.630872 0.0229752 6 0.633185 0.519672 0.11351250 3.4393e-01 6.8324e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4747e-01 8.4673e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0715707 2.8990e-02 weaklyHypermeth 0.9663255 insignificant 0.5775076 0.630872 -0.05477508 6 0.6175399 0.519672 0.0978678 9.2593e-01 2.4139e-03 weaklyHypometh 1.0000e+00 3.3527e-02 weaklyHypometh 8.0981e-01 1.5935e-02 weaklyHypometh 1.0000e+00 2.4898e-01 insignificant 0.01970390 6.0366e-01 insignificant 1.0000000 insignificant chr11 72031932 72032932 108333 PDE2A ENSG00000186642 0.420020 389 9 0.3342141 258 9 0.298112 161 9 0.3899787 376 9 0.410080 127 8 0.387339 423 9 0.178365 121 9 0.330322 147 9 0.225023 128 7 0.355068 121 9 0.342306 286 9 0.377622 90 6 0.267198 173 9 0.475385 63 2 0.4790817 126 8 0.101190 44 2 0.298333 39 5 0.386315 679 9 0.3454346 236 9 0.352265 333 8 0.299743 123 9 0.338689 221 9 0.317738 161 9 0.290199 147 9 0.490221 198 9 0.3514353 348 9 0.391943 245 9 0.356238 88 6 0.393466 211 9 0.297542 347 9 0.437911 305 9 0.3748275 348 9 0.1830301 199 9 0.0871016 228 9 0.2857143 27 2 0.159259 47 5 0.274074 133 6 0.2330623 299 9 0.395438 368 8 0.471626 493 10 0.3777656 399 9 0.3422315 303 8 0.3052190 315 9 0.278775 0.191764 0.291349 0.245382 0.310382 0.306249 0.187049 0.273509 0.174647 0.272899 0.302812 0.2389832 0.1737147 0.317380 0.349405 0.1335107 0.255963 0.2584318 0.176993 0.265667 0.301563 0.209227 0.247724 0.265250 0.385970 0.301834 0.250375 0.327973 0.276322 0.250391 0.3003732 0.428799 0.1208152 0.0673668 0.2218082 0.0922144 0.233157 0.176950 0.289074 0.282672 0.2274005 0.258193 0.266493 5 0.252259 0.309854 -0.03898366 9 0.319995 0.340847 -0.02085226 0.973017 0.06734747 insignificant 1 1.00000 insignificant 0.956925 2.1699e-01 insignificant 1 1.0000000 insignificant -0.0239801 0.382665 insignificant 1 insignificant 0.252432 0.1442411 0.1257583 9 0.376662 0.180305 0.1963576 2.3777e-11 9.9986e-01 weaklyHypermeth 5.5296e-10 1.0000e+00 weaklyHypermeth 1.5019e-06 9.9737e-01 weaklyHypermeth 6.5935e-05 1.0000e+00 weaklyHypermeth 0.1339757 4.8047e-03 weaklyHypermeth 1.0445e-01 insignificant 0.252490 0.253063 -0.0126747 9 0.410904 0.449862 -0.0389577 8.3144e-01 9.9322e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1971e-01 1.0237e-01 insignificant 1.0000e+00 1.000000 insignificant -4.0774e-02 2.7135e-01 insignificant 1.0000e+00 insignificant 0.310357 0.1439313 0.1786809 9 0.395777 0.180305 0.215472 9.7986e-13 9.9954e-01 weaklyHypermeth 4.0827e-11 1.0000e+00 weaklyHypermeth 8.6732e-06 9.9943e-01 weaklyHypermeth 3.2123e-04 1.0000e+00 weaklyHypermeth 0.15795577 1.9207e-03 weaklyHypermeth 5.3354e-02 weaklyHypermeth 0.309967 0.252267 0.0200054 9 0.374932 0.394848 -0.01991599 1.9285e-01 3.7328e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0261e-01 3.3659e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0167935 6.2535e-01 insignificant 1.0000000 insignificant 0.1443966 0.252132 -0.14211359 9 0.1966959 0.358953 -0.1622569 9.9994e-01 7.9543e-08 weaklyHypometh 1.0000e+00 5.6816e-06 weaklyHypometh 9.9974e-01 2.7623e-04 weaklyHypometh 1.0000e+00 1.3811e-02 weaklyHypometh -0.17474926 2.3177e-03 weaklyHypometh 0.0858398 weaklyHypometh chr11 73744108 73745108 108404 P4HA3 ENSG00000149380 0.637374 190 5 0.5029425 95 5 0.571244 103 5 0.7074883 78 5 0.433333 26 3 0.735448 166 5 0.788889 51 5 0.638370 60 5 0.626912 70 5 0.594231 50 5 0.589662 123 5 0.717778 52 5 0.723001 71 5 NA 0 0 0.7884615 88 5 0.758333 49 5 0.692424 53 5 0.615238 103 5 0.7032127 92 5 0.789905 270 5 0.860714 36 5 0.720549 50 5 0.628157 109 5 0.773333 45 4 0.800000 25 5 0.6901555 123 5 0.704437 38 5 0.852381 40 5 0.607183 70 5 0.653747 111 5 0.653333 102 5 0.7326962 220 5 0.7189706 89 5 0.6120879 67 5 0.6678788 88 5 0.644872 60 5 0.694180 73 5 0.6700549 112 5 0.754549 232 5 0.763918 209 5 0.6349373 115 5 0.7098532 152 5 0.7311801 137 5 0.629547 0.503575 0.565683 0.701629 0.425000 0.739367 0.780556 0.627832 0.618024 0.589363 0.586957 0.7165404 0.7180168 NA 0.782532 0.7526042 0.686061 0.6142262 0.694750 0.791703 0.866071 0.714791 0.622218 0.778958 0.798750 0.686641 0.709791 0.854762 0.592743 0.647527 0.6479167 0.731064 0.7143934 0.6190934 0.6778409 0.6485395 0.693778 0.671471 0.751515 0.763081 0.6328039 0.705562 0.729811 5 0.667598 0.714138 -0.02680223 5 0.686499 0.712852 -0.02635324 0.955428 0.16938814 insignificant 1 1.00000 insignificant 0.993356 4.2748e-02 weaklyHypometh 1 1.0000000 insignificant -0.0591496 0.086093 lowCoverage 1 lowCoverage 0.667598 0.6687117 0.0245379 5 0.686499 0.661999 0.0244996 1.3234e-02 5.6940e-01 weaklyHypermeth 1.3103e-01 1.0000e+00 insignificant 7.6476e-02 8.7288e-02 insignificant 7.6476e-01 1.0000e+00 insignificant -0.0040996 8.8181e-01 lowCoverage 1.0000e+00 lowCoverage 0.667598 0.675740 -0.0414648 5 0.686499 0.729008 -0.0425087 9.6174e-01 9.6800e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8289e-01 3.9768e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -5.4980e-02 1.1237e-01 lowCoverage 1.0000e+00 lowCoverage 0.714138 0.6687117 0.0525163 5 0.712852 0.661999 0.050853 4.1323e-04 8.3342e-01 weaklyHypermeth 5.1016e-03 1.0000e+00 weaklyHypermeth 1.0804e-02 8.2662e-01 weaklyHypermeth 1.4032e-01 1.0000e+00 insignificant 0.05504993 7.2717e-02 lowCoverage 8.1705e-01 lowCoverage 0.714138 0.675740 -0.0165531 5 0.712852 0.729008 -0.01615547 8.0454e-01 3.2137e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9537e-01 7.2749e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0041697 9.0277e-01 lowCoverage 1.0000000 lowCoverage 0.6687117 0.675740 -0.07204562 5 0.6619994 0.729008 -0.0670083 8.9657e-01 1.4627e-03 weaklyHypometh 1.0000e+00 2.1831e-02 weaklyHypometh 7.8904e-01 3.2410e-02 weaklyHypometh 1.0000e+00 4.6970e-01 insignificant -0.05088020 1.0657e-01 insignificant 1.0000000 insignificant chr11 74689886 74690886 108431 SLCO2B1 ENSG00000137491 0.850610 107 5 0.5885102 213 3 0.687516 131 5 0.9541931 82 5 0.778182 90 5 0.553039 190 3 0.709259 102 5 0.747277 142 5 0.607696 69 5 0.565701 72 4 0.846993 260 5 0.604167 30 3 0.795212 98 3 0.911859 53 5 0.6011803 112 5 0.563492 31 2 0.066667 8 1 0.865307 74 5 0.6911054 283 5 0.666430 136 5 0.508013 63 3 0.475000 25 1 0.782024 136 6 0.641345 97 3 0.750000 22 1 0.7605887 289 5 0.652902 90 3 0.365266 61 3 0.681415 261 6 0.848590 294 5 0.882009 342 5 0.8525139 161 5 0.8104762 124 5 0.6854092 154 5 0.9401198 210 3 0.555556 5 0 0.733216 136 5 0.6754589 203 3 0.710297 148 6 0.687184 145 5 0.8686147 61 5 0.3897597 61 4 0.8137538 77 5 0.877280 0.810651 0.885466 0.928118 0.891450 0.799030 0.850450 0.907531 0.889908 0.763669 0.830940 0.3671171 0.8896792 0.860880 0.826356 0.7142857 NA 0.8731865 0.956983 0.760752 0.858801 0.798907 0.863299 0.859930 0.864865 0.907176 0.813724 0.765483 0.906734 0.928633 0.9041767 0.867127 0.8510511 0.8719407 0.8344606 0.6532147 0.912825 0.851239 0.803732 0.873779 0.9083889 0.653591 0.853070 1 0.851511 0.877784 -0.02436107 5 0.647571 0.664320 -0.01674975 0.738193 0.35702194 insignificant 1 1.00000 insignificant 0.285870 3.2590e-01 insignificant 1 1.0000000 insignificant -0.0005858 0.992724 lowCoverage 1 lowCoverage 0.853380 0.8545673 0.0073592 5 0.755499 0.728834 0.0266647 2.0281e-01 8.2732e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8261e-01 8.0072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0506529 4.7362e-01 lowCoverage 1.0000e+00 lowCoverage 0.853380 0.800813 0.0538503 5 0.755499 0.694615 0.0608843 3.1161e-04 7.4434e-01 weaklyHypermeth 1.3548e-02 1.0000e+00 weaklyHypermeth 6.0665e-02 4.2701e-01 insignificant 1.0000e+00 1.000000 insignificant -1.1202e-02 9.0819e-01 lowCoverage 1.0000e+00 lowCoverage 0.879695 0.8545673 0.0331363 5 0.775040 0.728834 0.046206 1.0504e-01 9.4378e-01 insignificant 9.3783e-01 1.0000e+00 insignificant 5.6606e-01 8.3377e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05006710 4.9578e-01 lowCoverage 1.0000e+00 lowCoverage 0.879695 0.800813 0.0746892 5 0.775040 0.694615 0.08042565 9.6198e-04 9.4462e-01 weaklyHypermeth 3.1032e-02 1.0000e+00 weaklyHypermeth 1.0322e-01 6.3662e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0106163 9.1467e-01 lowCoverage 1.0000000 lowCoverage 0.8545673 0.800813 0.04771063 5 0.7288343 0.694615 0.0342196 1.8175e-01 6.4376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3517e-01 6.5655e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03945084 7.0134e-01 lowCoverage 1.0000000 lowCoverage chr11 76044040 76045040 108501 C11orf30 ENSG00000158636 0.856229 512 8 0.7424470 280 10 0.880837 209 9 0.8336239 460 8 0.836617 185 7 0.822786 649 10 0.879509 225 7 0.783589 202 10 0.856306 158 7 0.929766 177 6 0.882098 316 10 0.897222 57 5 0.914142 152 7 0.922430 102 7 0.9416437 245 5 0.654687 84 7 NA 0 0 0.914722 849 9 0.8780884 320 9 0.842488 380 8 0.902298 121 8 0.617647 62 5 0.754663 304 9 0.896996 73 7 0.901398 406 8 0.8547646 329 10 0.769058 138 8 0.844545 73 5 0.757675 339 9 0.877207 394 10 0.869474 463 10 0.7863877 417 10 0.6765350 261 10 0.6851998 481 10 0.8680556 290 8 0.764286 40 5 0.505512 373 10 0.8345600 419 10 0.891346 536 8 0.870364 417 10 0.7855579 424 8 0.9065509 482 7 0.8494226 402 8 0.847891 0.780675 0.852858 0.868218 0.858141 0.905048 0.861688 0.863446 0.866104 0.937000 0.871120 0.8858586 0.8791506 0.941821 0.918857 0.5884953 NA 0.8872756 0.878563 0.880730 0.941438 0.808481 0.873529 0.931910 0.927402 0.859490 0.823017 0.902039 0.852322 0.891467 0.8634899 0.857342 0.6299214 0.5858936 0.8346453 0.8577411 0.505605 0.894740 0.906649 0.888093 0.8387072 0.894686 0.862731 5 0.858248 0.867265 -0.00970282 8 0.782910 0.779738 0.00317210 0.626484 0.61788004 insignificant 1 1.00000 insignificant 0.070893 8.3411e-01 insignificant 1 1.0000000 insignificant 0.0369325 0.223142 insignificant 1 insignificant 0.858273 0.6845494 0.1839246 10 0.828365 0.634289 0.1940760 1.2931e-14 9.5511e-01 weaklyHypermeth 4.3104e-13 1.0000e+00 weaklyHypermeth 7.2074e-03 8.5783e-01 weaklyHypermeth 9.7397e-02 1.0000e+00 weaklyHypermeth 0.1339173 5.4197e-02 insignificant 6.7747e-01 insignificant 0.858402 0.826183 -0.0011992 8 0.861201 0.858710 0.0024913 4.2619e-01 4.0140e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7142e-01 5.3729e-01 insignificant 1.0000e+00 1.000000 insignificant -4.3729e-03 8.7273e-01 insignificant 1.0000e+00 insignificant 0.867543 0.6849168 0.1974349 8 0.857712 0.697717 0.159994 1.7503e-09 8.9710e-01 weaklyHypermeth 3.8896e-08 1.0000e+00 weaklyHypermeth 4.9249e-02 4.5010e-01 weaklyHypermeth 5.1301e-01 1.0000e+00 insignificant 0.09698481 1.4274e-01 insignificant 1.0000e+00 insignificant 0.867543 0.826183 0.0076975 8 0.857712 0.858710 -0.00099802 4.5327e-01 3.1838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9060e-01 2.5968e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0413054 2.2403e-01 insignificant 1.0000000 insignificant 0.6849168 0.826183 -0.18712405 8 0.6977174 0.858710 -0.1609924 9.8044e-01 1.5219e-04 weaklyHypometh 1.0000e+00 2.7422e-03 weaklyHypometh 7.6953e-01 8.9558e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.13829016 5.0130e-02 insignificant 0.7372081 insignificant chr11 76702735 76703735 108507 GDPD4 ENSG00000178795 0.735257 111 5 0.5492208 130 5 0.394156 35 2 0.7397403 89 5 0.555000 31 5 0.653587 135 5 0.602381 45 5 0.768056 109 5 0.756227 37 2 0.806052 52 5 0.591529 153 5 0.916667 10 0 0.733333 58 2 0.652308 41 5 0.7579710 63 5 0.500000 12 0 NA 0 0 0.648659 80 5 0.8014815 84 5 0.553114 118 5 0.740000 26 2 0.907692 32 2 0.765942 68 5 0.613095 27 2 0.839286 42 5 0.6863158 87 5 0.817794 46 2 0.489286 18 2 0.774066 71 5 0.559641 98 5 0.689827 113 5 0.7862221 140 5 0.5672658 72 5 0.6727273 49 5 0.4271070 106 5 NA 0 0 0.605476 61 5 0.4287582 94 5 0.559848 88 5 0.726769 88 5 0.6133333 40 2 0.6845455 46 2 0.7615385 91 5 0.807143 0.644390 0.688404 0.834120 0.662245 0.737122 0.741497 0.825170 0.819747 0.865525 0.789120 0.7992881 0.7755102 0.722449 0.757764 0.5204082 NA 0.8022519 0.798186 0.702773 0.824490 0.827316 0.791038 0.836735 0.778061 0.721805 0.814511 0.669096 0.781476 0.793317 0.7591770 0.843585 0.7780779 0.6848073 0.7409500 NA 0.673105 0.712325 0.771058 0.755542 0.7863946 0.717440 0.863422 2 0.716439 0.750000 -0.04121135 5 0.646649 0.646126 0.00052238 0.855284 0.04921917 weaklyHypometh 1 1.00000 insignificant 0.918600 2.8943e-02 weaklyHypometh 1 1.0000000 insignificant -0.0532338 0.254053 lowCoverage 1 lowCoverage 0.716439 0.6570681 0.0496930 5 0.646649 0.449859 0.1967902 4.2387e-03 9.9213e-01 weaklyHypermeth 4.3698e-02 1.0000e+00 weaklyHypermeth 3.5321e-02 9.9192e-01 weaklyHypermeth 3.9246e-01 1.0000e+00 insignificant 0.1289299 5.7119e-02 lowCoverage 6.9657e-01 lowCoverage 0.717063 0.753541 -0.0242371 5 0.671090 0.592509 0.0785809 7.6993e-01 4.7430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4048e-01 6.4828e-01 insignificant 1.0000e+00 1.000000 insignificant -1.0264e-05 9.9983e-01 lowCoverage 1.0000e+00 lowCoverage 0.750000 0.6570681 0.0894587 5 0.646126 0.449859 0.196268 1.2578e-04 9.9931e-01 weaklyHypermeth 1.6335e-03 1.0000e+00 weaklyHypermeth 6.7291e-03 9.9937e-01 weaklyHypermeth 9.2180e-02 1.0000e+00 weaklyHypermeth 0.18216368 1.5483e-02 lowCoverage 2.7018e-01 lowCoverage 0.751634 0.753541 0.0131099 5 0.698259 0.592509 0.10574920 3.2402e-01 8.7776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3785e-01 8.1912e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0532236 3.1679e-01 lowCoverage 1.0000000 lowCoverage 0.6622691 0.753541 -0.06913905 5 0.5248351 0.592509 -0.0676743 9.9839e-01 7.8173e-02 insignificant 1.0000e+00 8.0591e-01 insignificant 9.9737e-01 3.2837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.12894012 7.0828e-02 lowCoverage 0.9443744 lowCoverage chr11 78322962 78323962 108579 ENSG00000210533 0.799356 291 12 0.6314530 241 11 0.649306 82 6 0.6994732 169 9 0.752884 205 10 0.856019 118 8 0.755997 142 8 0.834631 161 8 0.820161 101 12 0.837963 88 10 0.815801 410 12 0.691667 106 9 0.800886 334 12 0.646245 123 7 0.7875712 158 12 0.527778 71 9 0.668452 49 6 0.738873 255 9 0.7944888 172 8 0.785050 124 8 0.735020 80 9 0.864583 43 4 0.746593 255 12 0.725758 55 6 0.744733 91 3 0.8513932 283 8 0.792433 154 11 0.766111 59 7 0.774751 268 12 0.772777 334 8 0.829394 261 8 0.8384860 220 8 0.6710964 318 12 0.6661997 253 11 0.7519657 194 12 0.785714 10 0 0.722582 109 10 0.8168464 302 8 0.787586 155 11 0.820792 209 8 0.7949545 190 11 0.7716231 184 10 0.8126102 153 11 0.844723 0.737852 0.702242 0.808250 0.743626 0.906758 0.843604 0.877654 0.843878 0.888077 0.855071 0.7048489 0.8541707 0.824020 0.842882 0.5721248 0.815400 0.8134718 0.791564 0.801233 0.798942 0.917398 0.802105 0.835977 0.798220 0.856806 0.844419 0.759600 0.843236 0.831310 0.8413271 0.902099 0.7050014 0.7341815 0.7433491 0.7244215 0.763756 0.838420 0.855628 0.872909 0.8639510 0.851168 0.879436 1 0.785588 0.859724 -0.00801101 11 0.751624 0.792735 -0.04111103 0.701448 0.43429917 insignificant 1 1.00000 insignificant 0.984163 2.5767e-01 insignificant 1 1.0000000 insignificant -0.0421332 0.086303 insignificant 1 insignificant 0.785462 0.8026981 0.0581689 10 0.716142 0.749770 -0.0336280 6.8098e-04 9.9976e-01 weaklyHypermeth 7.5665e-03 1.0000e+00 weaklyHypermeth 2.5124e-02 9.9737e-01 weaklyHypermeth 2.9214e-01 1.0000e+00 insignificant 0.0089687 7.8060e-01 insignificant 1.0000e+00 insignificant 0.785672 0.809203 -0.0258439 12 0.768832 0.788424 -0.0195923 8.0796e-01 9.6280e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7384e-01 1.6871e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -5.2810e-02 2.0445e-02 weaklyHypometh 6.5953e-01 insignificant 0.859524 0.8026981 0.0693941 9 0.763126 0.749770 0.013356 3.3726e-06 9.9958e-01 weaklyHypermeth 5.2638e-05 1.0000e+00 weaklyHypermeth 4.9312e-03 9.9995e-01 weaklyHypermeth 7.2518e-02 1.0000e+00 weaklyHypermeth 0.05110197 1.0914e-01 insignificant 1.0000e+00 insignificant 0.859599 0.809203 -0.0290386 11 0.765313 0.788424 -0.02311092 7.5452e-01 2.7135e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.9480e-01 4.2960e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0106772 5.2488e-01 insignificant 1.0000000 insignificant 0.8023649 0.809203 -0.09497559 10 0.7080645 0.788424 -0.0803596 1.0000e+00 8.7665e-07 weaklyHypometh 1.0000e+00 3.9848e-05 weaklyHypometh 1.0000e+00 2.1741e-04 weaklyHypometh 1.0000e+00 1.3288e-02 weaklyHypometh -0.06177914 5.6138e-02 insignificant 0.8135940 insignificant chr11 78989127 78990127 108646 MIR708 ENSG00000211997 0.797416 188 5 0.6133242 75 5 0.445455 46 5 0.8294957 130 5 0.783333 24 3 0.843712 198 5 0.821429 29 3 0.722467 83 5 0.724127 40 5 0.708730 40 5 0.732804 83 5 0.600000 15 0 0.487909 110 5 NA 0 0 0.5500000 71 5 0.800000 6 0 0.466667 36 5 0.661528 163 5 0.5689744 72 5 0.736846 145 5 0.850000 24 3 0.599429 98 5 0.824899 126 5 0.777869 60 5 0.717848 77 5 0.5536426 131 5 0.510226 75 5 0.678571 22 3 0.685058 92 5 0.698423 159 5 0.616395 71 5 0.8116239 114 5 0.0000000 150 5 0.0000000 72 5 0.0000000 78 3 0.030769 53 5 0.000000 54 5 0.0000000 96 5 0.523109 215 5 0.739598 233 5 0.5410278 206 5 0.5524619 245 5 0.4557191 95 5 0.824679 0.645801 0.415549 0.853283 0.793716 0.841578 0.867096 0.722082 0.721767 0.730386 0.873341 0.6168033 0.5283452 NA 0.574007 0.8360656 0.526412 0.6969721 0.601345 0.754800 0.877049 0.639867 0.830354 0.816451 0.715931 0.593986 0.618492 0.736625 0.720928 0.745220 0.6622385 0.824177 0.0000000 0.0000000 0.0037831 0.0189155 0.000000 0.000000 0.532471 0.761189 0.5802019 0.570629 0.474981 3 0.709781 0.705434 0.00815345 5 0.591193 0.583251 0.00794199 0.682183 0.72367520 insignificant 1 1.00000 insignificant 0.851270 6.0681e-01 insignificant 1 1.0000000 insignificant -0.0150225 0.730669 lowCoverage 1 lowCoverage 0.709781 0.0039761 0.7056373 5 0.591193 0.003663 0.5875297 5.3571e-39 1.0000e+00 hypermethylated 1.7857e-36 1.0000e+00 hypermethylated 1.0054e-12 1.0000e+00 hypermethylated 2.5135e-10 1.0000e+00 hypermethylated 0.6735147 3.3985e-15 lowCoverage 3.3985e-12 lowCoverage 0.710238 0.563380 0.1311526 5 0.709431 0.578802 0.1306295 8.6791e-04 9.9799e-01 weaklyHypermeth 3.6163e-02 1.0000e+00 weaklyHypermeth 2.9132e-03 9.9946e-01 weaklyHypermeth 1.3242e-01 1.000000 insignificant 1.1626e-01 7.3231e-02 lowCoverage 1.0000e+00 lowCoverage 0.705434 0.0039761 0.7023697 5 0.583251 0.003663 0.579588 4.7649e-39 1.0000e+00 hypermethylated 1.5883e-36 1.0000e+00 hypermethylated 5.2095e-11 1.0000e+00 hypermethylated 1.7365e-08 1.0000e+00 hypermethylated 0.68853722 1.0825e-10 lowCoverage 1.0825e-07 lowCoverage 0.706107 0.563380 0.1241334 5 0.699901 0.578802 0.12109913 2.9048e-04 9.9799e-01 weaklyHypermeth 1.2630e-02 1.0000e+00 weaklyHypermeth 7.3992e-04 9.9993e-01 weaklyHypermeth 3.6996e-02 1.000000 weaklyHypermeth 0.1312822 5.0870e-02 lowCoverage 1.0000000 lowCoverage 0.0039841 0.563380 -0.57959239 5 0.0043956 0.578802 -0.5744061 1.0000e+00 1.5318e-23 hypomethylated 1.0000e+00 5.1058e-21 hypomethylated 1.0000e+00 4.9478e-09 hypomethylated 1.0000e+00 1.6493e-06 hypomethylated -0.55725503 2.6814e-04 lowCoverage 0.0243764 lowCoverage chr11 83705214 83706214 108939 DLG2 ENSG00000150672 0.958521 110 5 0.6383459 148 5 0.573019 98 5 0.9473099 93 5 0.986667 64 5 0.836836 173 5 0.927206 80 5 0.939887 120 5 0.836869 50 5 0.920376 92 5 0.937534 251 5 0.971429 31 4 0.877419 130 5 0.914286 33 5 0.8940523 87 5 0.434286 27 5 0.000000 1 0 0.660742 132 5 0.8825506 174 5 0.912440 203 5 0.895139 75 5 0.836480 57 5 0.953231 116 5 0.895556 42 5 0.872308 62 5 0.8815030 157 5 0.795264 73 5 0.833333 14 1 0.890978 148 5 0.841793 303 5 0.844098 198 5 0.9291244 150 5 0.4975071 92 5 0.1936474 144 5 1.0000000 18 1 0.367063 35 4 0.606165 62 5 0.7257350 248 5 0.831827 164 5 0.821928 89 5 0.8367358 86 5 0.9051471 82 5 0.8236078 113 5 0.960680 0.636261 0.572066 0.944658 0.985685 0.833529 0.923290 0.940029 0.836447 0.921525 0.936527 0.9763365 0.8715614 0.907975 0.894023 0.4326030 NA 0.7829601 0.876487 0.910709 0.972265 0.828904 0.949788 0.890593 0.869136 0.880189 0.785928 1.000000 0.889111 0.837365 0.8374182 0.925309 0.5004348 0.1880730 NA 0.4588811 0.522000 0.728734 0.823380 0.819861 0.8319048 0.902495 0.816396 5 0.861230 0.873835 -0.01385636 5 0.719199 0.786905 -0.06770604 0.883839 0.22141260 insignificant 1 1.00000 insignificant 0.896008 2.1818e-01 insignificant 1 1.0000000 insignificant -0.0699119 0.220213 lowCoverage 1 lowCoverage 0.861230 0.5292154 0.3364683 5 0.719199 0.522727 0.1964728 4.2724e-12 9.9895e-01 hypermethylated 1.1243e-10 1.0000e+00 hypermethylated 3.4974e-06 9.9986e-01 hypermethylated 1.2491e-04 1.0000e+00 hypermethylated 0.2374691 1.0224e-01 lowCoverage 1.0000e+00 lowCoverage 0.861641 0.838951 0.0233628 5 0.863039 0.841155 0.0218841 2.0402e-01 7.0633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7844e-02 8.3998e-01 insignificant 1.0000e+00 1.000000 insignificant -4.1360e-02 4.6835e-01 lowCoverage 1.0000e+00 lowCoverage 0.873835 0.5292154 0.3486508 5 0.786905 0.522727 0.264179 2.0610e-10 9.9954e-01 hypermethylated 5.7250e-09 1.0000e+00 hypermethylated 1.1869e-06 9.9987e-01 hypermethylated 5.3948e-05 1.0000e+00 hypermethylated 0.30738095 4.4278e-02 lowCoverage 5.7054e-01 lowCoverage 0.875000 0.838951 0.0372502 5 0.877620 0.841155 0.03646467 5.4974e-02 9.0303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4686e-02 9.5840e-01 weaklyHypermeth 4.5894e-01 1.000000 insignificant 0.0285514 1.8831e-01 lowCoverage 1.0000000 lowCoverage 0.5293132 0.838951 -0.31182701 5 0.5272720 0.841155 -0.3138832 9.9999e-01 8.7952e-05 hypomethylated 1.0000e+00 1.7949e-03 hypomethylated 9.9999e-01 6.3969e-04 hypomethylated 1.0000e+00 2.1387e-02 hypomethylated -0.27882959 6.0017e-02 lowCoverage 0.8439771 lowCoverage chr11 83705560 83706560 108940 DLG2 ENSG00000150672 0.958521 110 5 0.6383459 148 5 0.573019 98 5 0.9473099 93 5 0.986667 64 5 0.836836 173 5 0.927206 80 5 0.939887 120 5 0.836869 50 5 0.920376 92 5 0.937534 251 5 0.971429 31 4 0.877419 130 5 0.914286 33 5 0.8940523 87 5 0.434286 27 5 0.000000 1 0 0.660742 132 5 0.8825506 174 5 0.912440 203 5 0.895139 75 5 0.836480 57 5 0.953231 116 5 0.895556 42 5 0.872308 62 5 0.8815030 157 5 0.795264 73 5 0.833333 14 1 0.890978 148 5 0.841793 303 5 0.844098 198 5 0.9291244 150 5 0.4975071 92 5 0.1936474 144 5 1.0000000 18 1 0.367063 35 4 0.606165 62 5 0.7257350 248 5 0.831827 164 5 0.821928 89 5 0.8367358 86 5 0.9051471 82 5 0.8236078 113 5 0.960680 0.636261 0.572066 0.944658 0.985685 0.833529 0.923290 0.940029 0.836447 0.921525 0.936527 0.9763365 0.8715614 0.907975 0.894023 0.4326030 NA 0.7829601 0.876487 0.910709 0.972265 0.828904 0.949788 0.890593 0.869136 0.880189 0.785928 1.000000 0.889111 0.837365 0.8374182 0.925309 0.5004348 0.1880730 NA 0.4588811 0.522000 0.728734 0.823380 0.819861 0.8319048 0.902495 0.816396 5 0.861230 0.873835 -0.01385636 5 0.719199 0.786905 -0.06770604 0.883839 0.22141260 insignificant 1 1.00000 insignificant 0.896008 2.1818e-01 insignificant 1 1.0000000 insignificant -0.0699119 0.220213 lowCoverage 1 lowCoverage 0.861230 0.5292154 0.3364683 5 0.719199 0.522727 0.1964728 4.2724e-12 9.9895e-01 hypermethylated 1.1243e-10 1.0000e+00 hypermethylated 3.4974e-06 9.9986e-01 hypermethylated 1.2491e-04 1.0000e+00 hypermethylated 0.2374691 1.0224e-01 lowCoverage 1.0000e+00 lowCoverage 0.861641 0.838951 0.0233628 5 0.863039 0.841155 0.0218841 2.0402e-01 7.0633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7844e-02 8.3998e-01 insignificant 1.0000e+00 1.000000 insignificant -4.1360e-02 4.6835e-01 lowCoverage 1.0000e+00 lowCoverage 0.873835 0.5292154 0.3486508 5 0.786905 0.522727 0.264179 2.0610e-10 9.9954e-01 hypermethylated 5.7250e-09 1.0000e+00 hypermethylated 1.1869e-06 9.9987e-01 hypermethylated 5.3948e-05 1.0000e+00 hypermethylated 0.30738095 4.4278e-02 lowCoverage 5.7054e-01 lowCoverage 0.875000 0.838951 0.0372502 5 0.877620 0.841155 0.03646467 5.4974e-02 9.0303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4686e-02 9.5840e-01 weaklyHypermeth 4.5894e-01 1.000000 insignificant 0.0285514 1.8831e-01 lowCoverage 1.0000000 lowCoverage 0.5293132 0.838951 -0.31182701 5 0.5272720 0.841155 -0.3138832 9.9999e-01 8.7952e-05 hypomethylated 1.0000e+00 1.7949e-03 hypomethylated 9.9999e-01 6.3969e-04 hypomethylated 1.0000e+00 2.1387e-02 hypomethylated -0.27882959 6.0017e-02 lowCoverage 0.8439771 lowCoverage chr11 84522869 84523869 108995 ENSG00000210594 0.913087 225 7 0.7286202 85 6 0.856660 102 8 0.8554720 163 7 0.912963 62 7 0.747533 154 6 0.888360 95 6 0.854630 68 7 0.882812 51 3 0.844443 60 6 0.891569 154 8 0.964286 48 5 0.881448 74 4 NA 0 0 0.7996032 61 8 0.828956 52 5 0.712449 61 4 0.816134 132 7 0.7669559 88 6 0.775504 113 5 0.842657 34 2 0.571882 29 3 0.804279 125 7 1.000000 35 4 0.850000 43 4 0.9145022 89 8 0.731981 66 7 0.878409 39 3 0.804762 58 5 0.877160 94 6 0.884972 80 6 0.8249842 240 9 0.7492403 79 6 0.8060033 80 6 0.8218729 176 8 0.912314 58 5 0.912698 59 5 0.8565105 139 8 0.929520 232 7 0.934822 213 7 0.9620858 167 7 0.8093257 203 7 0.9148338 233 7 0.916021 0.803787 0.853087 0.786123 0.818367 0.781686 0.897263 0.902551 0.831207 0.889349 0.938904 0.9120505 0.8223734 NA 0.771866 0.9537209 0.772263 0.8043546 0.857073 0.785093 0.879454 0.721304 0.867427 0.979010 0.925170 0.899829 0.826504 0.843950 0.844444 0.882993 0.9062300 0.762282 0.6679749 0.7213040 0.8160081 0.9150617 0.878037 0.796121 0.895378 0.900715 0.9312388 0.905087 0.858142 2 0.862013 0.855150 0.00549606 6 0.858933 0.859945 -0.00101222 0.393069 0.62278099 insignificant 1 1.00000 insignificant 0.825309 2.7564e-01 insignificant 1 1.0000000 insignificant 0.0058406 0.866364 insignificant 1 insignificant 0.862013 0.8257191 0.0411969 6 0.858933 0.842431 0.0165024 6.9400e-02 9.3193e-01 insignificant 6.4259e-01 1.0000e+00 insignificant 2.2143e-01 8.4675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0051336 8.6995e-01 insignificant 1.0000e+00 insignificant 0.862013 0.924618 -0.0494947 6 0.858933 0.922367 -0.0634341 9.9145e-01 2.2423e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8494e-01 2.1733e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -7.2145e-02 5.0119e-02 insignificant 1.0000e+00 insignificant 0.855150 0.8257191 0.0398569 6 0.859945 0.842431 0.017515 1.4809e-01 8.8398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1283e-01 9.5974e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01097422 7.8776e-01 insignificant 1.0000e+00 insignificant 0.855150 0.924618 -0.0517095 6 0.859945 0.922367 -0.06242185 9.9326e-01 3.8038e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6188e-01 1.4364e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0779852 7.3981e-02 insignificant 1.0000000 insignificant 0.8257191 0.924618 -0.08905820 6 0.8424307 0.922367 -0.0799365 9.9980e-01 4.0565e-05 weaklyHypometh 1.0000e+00 9.8939e-04 weaklyHypometh 9.9355e-01 5.1157e-04 weaklyHypometh 1.0000e+00 1.9676e-02 weaklyHypometh -0.06701099 1.0470e-01 insignificant 1.0000000 insignificant chr11 85716110 85717110 109033 ENSG00000222550 0.76868 236 5 0.70374 63 5 0.73333 46 4 0.818927 115 5 0.66395 47 4 0.82734 246 5 0.75751 86 5 0.86730 49 5 0.79588 69 5 0.76298 100 5 0.60720 173 5 0.75744 29 4 0.622118 114 5 0.500000 7 1 0.79770 118 5 0.86917 50 4 0.74683 57 4 0.83952 134 5 0.79187 79 5 0.691863 188 5 0.72500 17 2 0.860606 33 4 0.81413 73 5 0.77083 24 3 0.88998 50 5 0.801008 138 5 0.506349 27 4 0.825000 25 4 0.82149 53 5 0.712857 107 5 0.78391 93 5 0.81426 235 5 0.739930 88 5 0.687500 68 5 0.697177 78 5 0.8288799 60 4 0.76986 57 5 0.658181 102 5 0.83408 185 5 0.85756 178 5 0.828132 148 5 0.84045 159 5 0.821074 161 5 0.75924 0.69825 0.70370 0.835597 0.76289 0.81147 0.76177 0.84844 0.765033 0.741253 0.70908 0.76884 0.737475 NA 0.777436 0.83040 0.76452 0.84116 0.76622 0.823123 0.65998 0.857464 0.79231 0.91667 0.857890 0.748659 0.63774 0.847496 0.80233 0.667989 0.75661 0.80765 0.740910 0.686986 0.72293 0.801919 0.769139 0.630876 0.819946 0.84238 0.813257 0.82043 0.795837 3 0.78963 0.79657 -0.0150377 5 0.65483 0.75017 -0.0953345 0.909508 0.0518411 insignificant 1 1 insignificant 0.97528 0.092319 insignificant 1 1 insignificant -0.0309517 0.390793 lowCoverage 1 lowCoverage 0.78963 0.730684 0.0565976 5 0.65483 0.688975 -0.034145 4.8070e-03 0.99979 weaklyHypermeth 1.9228e-01 1 insignificant 4.3708e-02 0.67509 weaklyHypermeth 1.0000e+00 1 insignificant 0.0159130 6.3756e-01 lowCoverage 1.0000e+00 lowCoverage 0.79200 0.83875 -0.0415359 5 0.78580 0.83594 -0.05014063 9.9664e-01 0.01380681 weaklyHypometh 1.00000000 1.00000 insignificant 0.9969818 0.05992730 insignificant 1.00000 1.00000 insignificant -0.090093 0.00044311 lowCoverage 0.073852 lowCoverage 0.79657 0.730684 0.0719869 5 0.75017 0.688975 0.061190 2.5068e-04 0.98985 weaklyHypermeth 1.6712e-02 1 weaklyHypermeth 7.0726e-03 0.99834 weaklyHypermeth 3.9292e-01 1 insignificant 0.046865 2.3990e-01 lowCoverage 1.0000e+00 lowCoverage 0.79793 0.83875 -0.033904 5 0.80020 0.83594 -0.0357393 9.7126e-01 0.1185900 insignificant 1.0000e+00 1.00000 insignificant 0.82057903 0.336641 insignificant 1.000000 1 insignificant -0.0591418 0.065761 lowCoverage 1 lowCoverage 0.731707 0.83875 -0.1059680 5 0.726770 0.83594 -0.1091669 0.99988 1.0389e-05 weaklyHypometh 1 1.2986e-03 weaklyHypometh 0.99865 2.4402e-03 weaklyHypometh 1 2.0335e-01 insignificant -0.106006 7.8969e-03 lowCoverage 0.56406383 lowCoverage chr11 86390278 86391278 109055 FZD4 ENSG00000174804 0.66806 424 12 0.56269 316 12 0.58211 175 10 0.545829 303 12 0.58749 115 13 0.59790 455 12 0.51654 140 15 0.63521 183 12 0.61443 143 9 0.52463 116 10 0.64657 368 12 0.43797 78 7 0.636693 180 13 0.496296 43 8 0.58537 219 15 0.50749 112 10 0.44726 130 9 0.58067 348 12 0.65825 313 9 0.660852 419 12 0.68223 51 5 0.781944 63 5 0.56346 204 9 0.64310 75 3 0.63012 130 8 0.614556 444 12 0.721296 65 8 0.655556 38 3 0.56604 210 12 0.558071 374 12 0.53976 381 12 0.64584 464 12 0.524491 197 12 0.567264 179 12 0.483818 192 10 0.6413853 113 8 0.61333 90 9 0.536101 370 12 0.57890 344 12 0.60432 439 12 0.685292 398 12 0.67840 295 9 0.640613 285 12 0.61103 0.54347 0.47066 0.625830 0.66899 0.65994 0.55956 0.62655 0.638840 0.645597 0.64512 0.45787 0.684582 0.589850 0.618112 0.53262 0.56312 0.60033 0.67264 0.629229 0.57378 0.671770 0.67132 0.52757 0.619545 0.648356 0.63742 0.673154 0.65656 0.670168 0.61068 0.66058 0.570215 0.516857 0.58653 0.578356 0.659094 0.567904 0.652487 0.63746 0.631968 0.74558 0.620122 3 0.64760 0.67907 -0.0160044 12 0.57042 0.58596 -0.0155394 0.849331 0.0754956 insignificant 1 1 insignificant 0.99622 0.080471 insignificant 1 1 insignificant -0.0588831 0.032980 weaklyHypometh 1 insignificant 0.64778 0.621385 0.0302941 12 0.57981 0.544192 0.035621 2.4330e-02 0.95028 weaklyHypermeth 7.6031e-01 1 insignificant 2.6837e-01 0.74045 insignificant 1.0000e+00 1 insignificant 0.0135502 6.4473e-01 insignificant 1.0000e+00 insignificant 0.64757 0.70528 -0.0371901 12 0.56441 0.57165 -0.00723705 9.9384e-01 0.04559784 weaklyHypometh 1.00000000 1.00000 insignificant 0.9990190 0.01342843 weaklyHypometh 1.00000 1.00000 insignificant -0.062890 0.03689818 weaklyHypometh 1.000000 insignificant 0.67937 0.621385 0.0464682 12 0.59187 0.544192 0.047677 1.1853e-03 0.99968 weaklyHypermeth 5.3878e-02 1 weaklyHypermeth 3.2748e-02 0.99765 weaklyHypermeth 1.0000e+00 1 insignificant 0.072433 4.0873e-02 weaklyHypermeth 1.0000e+00 insignificant 0.67896 0.70528 -0.020536 12 0.57571 0.57165 0.0040653 8.5305e-01 0.1769208 insignificant 1.0000e+00 1.00000 insignificant 0.90249057 0.472204 insignificant 1.000000 1 insignificant -0.0040070 0.893493 insignificant 1 insignificant 0.621385 0.70568 -0.0680672 12 0.544192 0.60976 -0.0655627 0.99524 4.2078e-05 weaklyHypometh 1 3.5065e-03 weaklyHypometh 0.98879 3.4168e-03 weaklyHypometh 1 2.2779e-01 insignificant -0.076440 3.8566e-02 weaklyHypometh 1.00000000 insignificant chr11 90671524 90672524 109153 MIR1261 ENSG00000221586 0.84663 505 18 0.73605 380 17 0.69827 228 18 0.790751 272 11 0.80350 143 16 0.82328 446 18 0.76166 208 17 0.82474 275 17 0.74080 204 17 0.81237 239 18 0.79578 626 18 0.77848 76 7 0.792758 352 18 0.833333 56 6 0.80317 292 18 0.84530 71 4 0.77844 101 8 0.82706 317 18 0.79584 354 18 0.841189 476 18 0.76886 114 8 0.838207 142 15 0.82068 295 18 0.83783 142 13 0.85410 79 8 0.845290 435 18 0.821741 209 14 0.740808 66 5 0.74527 301 16 0.814788 498 18 0.72824 483 18 0.82986 539 18 0.753337 355 17 0.719273 330 16 0.765607 307 18 0.8611111 103 8 0.76921 113 9 0.751902 519 18 0.82715 329 15 0.86759 505 18 0.834633 337 17 0.81828 372 15 0.856120 444 15 0.83541 0.71850 0.69746 0.844402 0.83045 0.81217 0.79216 0.82350 0.768929 0.819597 0.81363 0.83061 0.808110 0.819392 0.830357 0.83694 0.79776 0.83745 0.81445 0.832336 0.78182 0.812821 0.81489 0.85285 0.830760 0.844381 0.82438 0.775759 0.77653 0.814099 0.72386 0.82887 0.704814 0.659917 0.74883 0.866261 0.748994 0.724953 0.822241 0.87433 0.838910 0.82158 0.863235 4 0.81605 0.84762 -0.0069267 18 0.82144 0.74212 0.0793229 0.657531 0.1577676 insignificant 1 1 insignificant 0.61084 0.032846 weaklyHypometh 1 1 insignificant -0.0073346 0.645164 insignificant 1 insignificant 0.81601 0.792584 0.0650242 17 0.81204 0.764598 0.047444 3.6345e-06 0.99967 weaklyHypermeth 3.6345e-04 1 weaklyHypermeth 2.2185e-02 0.98469 weaklyHypermeth 1.0000e+00 1 insignificant 0.0263980 2.5765e-01 insignificant 1.0000e+00 insignificant 0.81601 0.81329 -0.0410408 18 0.81204 0.85065 -0.03860852 9.9991e-01 0.00043541 weaklyHypometh 1.00000000 0.43541 insignificant 0.9997200 0.00024198 weaklyHypometh 1.00000 0.24198 insignificant -0.044284 0.00425628 weaklyHypometh 0.386934 insignificant 0.84823 0.792704 0.0701771 17 0.79212 0.776368 0.015748 1.5348e-07 1.00000 weaklyHypermeth 1.9185e-05 1 weaklyHypermeth 9.9254e-04 0.99999 weaklyHypermeth 1.1028e-01 1 insignificant 0.033733 1.8320e-01 insignificant 1.0000e+00 insignificant 0.84814 0.81329 -0.032423 18 0.78118 0.85065 -0.0694747 9.9822e-01 0.0013008 weaklyHypometh 1.0000e+00 0.65041 insignificant 0.98089958 0.022236 weaklyHypometh 1.000000 1 insignificant -0.0369498 0.035091 weaklyHypometh 1 insignificant 0.792584 0.81329 -0.1093533 17 0.764598 0.85065 -0.0860520 1.00000 9.3086e-11 weaklyHypometh 1 2.3272e-08 weaklyHypometh 0.99999 6.3960e-04 weaklyHypometh 1 9.2415e-02 weaklyHypometh -0.070682 1.3653e-02 weaklyHypometh 0.85332225 insignificant chr11 93129683 93130683 109320 C11orf54 ENSG00000182919 0.81111 173 5 0.67893 179 5 0.62786 145 5 0.851395 148 5 0.79627 109 5 0.78271 283 5 0.81320 158 5 0.68486 159 5 0.81164 138 5 0.75960 114 5 0.70768 249 5 0.76904 74 5 0.758268 107 5 0.680410 40 4 0.84152 112 5 0.67301 56 5 0.50000 41 2 0.78883 122 5 0.78624 106 5 0.780660 301 5 0.68269 44 5 0.757184 68 5 0.78269 110 5 0.61093 97 5 0.69647 40 5 0.765200 171 5 0.658603 92 5 0.667582 60 3 0.62041 103 5 0.721565 172 5 0.75333 178 5 0.74751 282 5 0.629739 147 5 0.767843 51 5 0.488889 20 1 0.7500000 14 2 0.71821 162 5 0.756107 168 5 0.76155 169 5 0.81447 154 5 0.760559 136 5 0.90346 120 5 0.726672 131 5 0.82125 0.69572 0.68282 0.890201 0.83885 0.79829 0.83978 0.71691 0.825262 0.858304 0.76156 0.79847 0.802231 0.771738 0.848992 0.70806 0.70466 0.83244 0.82472 0.794660 0.70976 0.802088 0.80937 0.78409 0.780861 0.789738 0.63548 0.800883 0.79590 0.788319 0.79608 0.79336 0.674399 0.805610 0.37905 0.649474 0.739987 0.811629 0.808820 0.83056 0.817397 0.89388 0.812137 4 0.78465 0.78541 0.0083268 5 0.76415 0.72103 0.0431175 0.231567 0.6690081 insignificant 1 1 insignificant 0.09892 0.815092 insignificant 1 1 insignificant 0.0398149 0.125942 lowCoverage 1 lowCoverage 0.78465 0.752669 0.0444183 5 0.76415 0.739661 0.024487 3.4675e-02 0.96948 weaklyHypermeth 1.0000e+00 1 insignificant 8.3379e-02 0.98373 insignificant 1.0000e+00 1 insignificant 0.0600301 2.5287e-01 lowCoverage 1.0000e+00 lowCoverage 0.78465 0.85211 -0.0390951 5 0.76415 0.81410 -0.04995647 9.8005e-01 0.04537643 weaklyHypometh 1.00000000 1.00000 insignificant 0.9587042 0.06964898 insignificant 1.00000 1.00000 insignificant -0.048180 0.22359871 lowCoverage 1.000000 lowCoverage 0.78541 0.752669 0.0375426 5 0.72103 0.739661 -0.018631 9.2395e-02 0.93835 insignificant 1.0000e+00 1 insignificant 3.3904e-01 0.87938 insignificant 1.0000e+00 1 insignificant 0.020215 6.8304e-01 lowCoverage 1.0000e+00 lowCoverage 0.78541 0.85211 -0.047314 5 0.72103 0.81410 -0.0930740 9.8953e-01 0.0423180 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.99969983 0.020812 weaklyHypometh 1.000000 1 insignificant -0.0879947 0.043368 lowCoverage 1 lowCoverage 0.752669 0.85211 -0.0847079 5 0.739661 0.81410 -0.0744434 0.99998 4.0684e-03 weaklyHypometh 1 2.0342e-01 insignificant 0.99984 3.6711e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.108210 7.7726e-02 lowCoverage 1.00000000 lowCoverage chr11 93889952 93890952 109324 ANKRD49 ENSG00000168876 0.77382 153 5 0.76014 36 2 0.74319 81 5 0.719925 60 5 0.73000 32 4 0.80838 198 5 0.68271 76 5 0.64190 37 5 0.70420 66 5 0.79583 62 5 0.69012 81 5 0.73523 64 5 0.797619 71 5 NA 0 0 0.73654 50 5 0.73670 42 5 0.71657 49 5 0.81111 48 2 0.80700 60 5 0.757161 150 5 0.87500 35 3 0.814141 51 5 0.78918 91 5 0.86000 19 3 0.61111 18 3 0.758788 60 5 0.783333 19 0 0.775000 18 3 0.76571 33 5 0.759967 83 5 0.76972 60 5 0.69055 228 5 0.661818 57 5 0.647955 61 5 0.612727 51 5 0.8888889 37 5 0.72703 57 5 0.789722 61 5 0.82752 107 5 0.75104 121 5 0.838228 106 5 0.79500 122 5 0.822586 118 5 0.78397 0.79473 0.73273 0.731292 0.74764 0.81626 0.70999 0.67722 0.728097 0.804835 0.71102 0.72604 0.814353 NA 0.756803 0.74244 0.72580 0.82600 0.82586 0.760452 0.86769 0.803221 0.78794 0.84245 0.695536 0.775300 0.78538 0.752774 0.76900 0.790102 0.79220 0.71158 0.671527 0.655961 0.62410 0.881551 0.759776 0.798808 0.842843 0.75747 0.852201 0.80610 0.830249 0 0.75636 0.75105 0.0050820 5 0.74994 0.74408 0.0058505 0.493113 0.5171411 insignificant 1 1 insignificant 0.86794 0.095968 insignificant 1 1 insignificant -0.0264043 0.263197 lowCoverage 1 lowCoverage 0.75636 0.722222 0.0343142 5 0.74994 0.718095 0.031841 3.3585e-02 0.89039 weaklyHypermeth 1.0000e+00 1 insignificant 1.7506e-01 0.81407 insignificant 1.0000e+00 1 insignificant 0.0232809 6.1357e-01 lowCoverage 1.0000e+00 lowCoverage 0.75636 0.80314 -0.0520014 5 0.74994 0.80310 -0.05316061 9.9670e-01 0.01997006 weaklyHypometh 1.00000000 1.00000 insignificant 0.9988222 0.01550027 weaklyHypometh 1.00000 1.00000 insignificant -0.062237 0.01083552 lowCoverage 0.902960 lowCoverage 0.75105 0.722222 0.0281288 5 0.74408 0.718095 0.025990 1.0834e-02 0.87074 weaklyHypermeth 3.7358e-01 1 insignificant 2.8161e-02 0.96406 weaklyHypermeth 1.0000e+00 1 insignificant 0.049685 3.2181e-01 lowCoverage 1.0000e+00 lowCoverage 0.75105 0.80314 -0.057860 5 0.74408 0.80310 -0.0590111 9.4987e-01 0.0206171 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.77972856 0.107178 insignificant 1.000000 1 insignificant -0.0358332 0.181674 lowCoverage 1 lowCoverage 0.722222 0.80314 -0.0871664 5 0.718095 0.80310 -0.0850012 0.99727 5.8352e-03 weaklyHypometh 1 2.6524e-01 insignificant 0.99981 7.6834e-03 weaklyHypometh 1 4.1771e-01 insignificant -0.085518 1.0392e-01 insignificant 1.00000000 insignificant chr11 94710026 94711026 109353 SESN3 ENSG00000149212 0.24305 290 7 0.19989 184 7 0.26625 61 5 0.056807 263 7 0.11072 124 7 0.18899 313 7 0.14897 209 7 0.14239 185 7 0.10310 184 7 0.08224 330 7 0.19491 142 7 0.13780 232 7 0.033131 225 7 0.077529 187 7 0.07970 401 7 0.16629 99 4 0.13364 86 6 0.25569 391 7 0.13683 122 7 0.059233 247 7 0.30584 79 6 0.074863 246 7 0.19142 205 7 0.25767 104 6 0.19077 192 7 0.030294 281 7 0.075812 133 7 0.083333 127 7 0.13495 193 7 0.048191 339 7 0.17677 218 7 0.22734 217 7 0.054639 182 7 0.059853 124 7 0.223810 111 4 0.0084034 76 4 0.16936 171 7 0.034812 227 7 0.10201 436 7 0.17897 283 7 0.034240 157 7 0.13619 129 6 0.077507 294 7 0.11210 0.13649 0.23676 0.070079 0.14286 0.18271 0.11674 0.10559 0.076276 0.081218 0.19280 0.12007 0.030079 0.079301 0.049531 0.22038 0.10837 0.13811 0.11648 0.055171 0.19814 0.073872 0.17228 0.17150 0.055781 0.025231 0.08845 0.079821 0.10480 0.039907 0.14413 0.22554 0.032208 0.043748 0.22598 0.015501 0.041901 0.037191 0.090828 0.11428 0.019577 0.12453 0.071024 5 0.10833 0.11097 0.0056137 7 0.20453 0.18541 0.0191226 0.533611 0.8822420 insignificant 1 1 insignificant 0.56168 0.905964 insignificant 1 1 insignificant -0.0089147 0.767844 insignificant 1 insignificant 0.10833 0.043771 0.0830358 7 0.20453 0.162078 0.042450 3.0626e-06 0.99936 weaklyHypermeth 3.4028e-04 1 weaklyHypermeth 8.9256e-06 0.99995 weaklyHypermeth 1.9239e-03 1 weaklyHypermeth 0.0490449 2.3590e-01 insignificant 1.0000e+00 insignificant 0.10773 0.08545 0.0197830 7 0.12660 0.10279 0.02381184 1.9356e-02 0.17799667 weaklyHypermeth 1.00000000 1.00000 insignificant 0.0093183 0.45659405 weaklyHypermeth 1.00000 1.00000 insignificant 0.035075 0.26394000 insignificant 1.000000 insignificant 0.11097 0.043771 0.0777660 7 0.18541 0.162078 0.023328 5.4113e-04 0.99652 weaklyHypermeth 2.9057e-02 1 weaklyHypermeth 1.4914e-04 0.99889 weaklyHypermeth 2.1306e-02 1 weaklyHypermeth 0.057960 2.0687e-01 insignificant 1.0000e+00 insignificant 0.11025 0.08545 0.019379 7 0.11665 0.10279 0.0138622 1.0502e-01 0.2651761 insignificant 1.0000e+00 1.00000 insignificant 0.06696512 0.377942 insignificant 1.000000 1 insignificant 0.0439901 0.239715 insignificant 1 insignificant 0.041620 0.08545 -0.0532089 7 0.042374 0.10279 -0.0604169 0.99911 1.2350e-03 weaklyHypometh 1 7.7185e-02 weaklyHypometh 0.99820 1.4080e-02 weaklyHypometh 1 7.0398e-01 insignificant -0.013970 7.5064e-01 insignificant 1.00000000 insignificant chr11 95714325 95715325 109464 MAML2 ENSG00000184384 0.36880 507 14 0.27244 378 13 0.51480 291 14 0.535253 553 14 0.36410 201 10 0.56994 611 15 0.51950 334 14 0.40752 492 14 0.37278 425 14 0.35960 431 15 0.42980 354 14 0.15985 363 14 0.421495 381 14 0.413824 215 7 0.46030 429 14 0.27900 321 10 0.21230 119 12 0.35938 491 14 0.24835 236 14 0.438151 434 14 0.39718 221 15 0.257880 296 14 0.38791 413 14 0.15558 300 15 0.48402 244 14 0.540863 362 14 0.202704 440 15 0.263048 208 14 0.37860 343 14 0.717399 520 14 0.64249 357 14 0.31452 538 15 0.223388 305 14 0.316339 172 14 0.075882 276 4 0.0654762 162 11 0.11599 271 15 0.118687 446 14 0.50209 483 14 0.31767 362 14 0.511044 443 14 0.48778 292 10 0.377380 476 14 0.34334 0.26072 0.49062 0.465656 0.36138 0.55330 0.50367 0.33856 0.339606 0.340482 0.34742 0.18676 0.395941 0.421236 0.449145 0.26917 0.18736 0.30294 0.30808 0.462236 0.34536 0.238612 0.33803 0.13290 0.432445 0.514022 0.18209 0.287854 0.30963 0.640334 0.63379 0.24059 0.208797 0.222050 0.09457 0.008378 0.086450 0.025089 0.445969 0.27228 0.404523 0.44316 0.280866 10 0.39506 0.41584 0.0026090 14 0.40605 0.40822 -0.0021684 0.663431 0.7887763 insignificant 1 1 insignificant 0.69667 0.852827 insignificant 1 1 insignificant -0.0098223 0.862536 insignificant 1 insignificant 0.39506 0.123162 0.3281785 14 0.40605 0.172572 0.233479 5.1374e-29 1.00000 hypermethylated 1.7125e-26 1 hypermethylated 4.1570e-15 1.00000 hypermethylated 2.0785e-12 1 hypermethylated 0.2327324 7.3329e-04 hypermethylated 9.1016e-02 hypermethylated 0.39611 0.40321 0.0045463 14 0.41677 0.41648 0.00029255 5.8035e-01 0.11801078 insignificant 1.00000000 1.00000 insignificant 0.8588765 0.04938088 inconclusive 1.00000 1.00000 insignificant -0.053833 0.27648313 insignificant 1.000000 insignificant 0.41584 0.123162 0.3297476 14 0.40822 0.172572 0.235648 3.0570e-13 1.00000 hypermethylated 7.6426e-11 1 hypermethylated 1.8453e-10 1.00000 hypermethylated 9.2265e-08 1 hypermethylated 0.242555 1.6900e-03 weaklyHypermeth 1.6900e-01 insignificant 0.41661 0.40321 -0.010103 14 0.41321 0.41648 -0.0032645 7.1999e-01 0.3407146 insignificant 1.0000e+00 1.00000 insignificant 0.98648327 0.294139 insignificant 1.000000 1 insignificant -0.0440106 0.498630 insignificant 1 insignificant 0.122577 0.40321 -0.3081656 14 0.173976 0.41648 -0.2425007 1.00000 3.4430e-15 hypomethylated 1 1.7215e-12 hypomethylated 1.00000 3.8276e-10 hypomethylated 1 3.8276e-07 hypomethylated -0.286565 6.1634e-04 hypomethylated 0.11601986 insignificant chr11 97982289 97983289 109540 ENSG00000216073 0.68193 188 5 0.64000 44 5 0.56557 91 5 0.736000 125 5 0.84000 25 5 0.75285 121 5 0.74364 48 4 0.69333 18 2 0.45016 39 5 0.70305 60 5 0.64365 147 5 0.66573 57 5 0.760000 50 5 NA 0 0 0.61197 67 5 0.55000 40 5 0.78921 47 5 0.75845 124 5 0.81587 43 5 0.711683 83 5 0.61667 23 3 0.666667 13 0 0.61429 74 5 1.00000 1 0 0.83571 37 5 0.626310 75 5 0.670000 20 2 0.800000 15 0 0.80000 5 0 0.771429 32 5 0.68590 58 5 0.75827 167 5 0.654444 40 5 0.685226 63 5 0.766387 79 5 0.8666667 59 5 0.66667 15 0 0.566667 30 5 0.76163 160 5 0.71881 184 5 0.714426 148 5 0.73067 199 5 0.727520 148 5 0.65650 0.59091 0.54894 0.732727 0.81818 0.74013 0.70868 0.65152 0.429726 0.677711 0.62778 0.65734 0.727273 NA 0.589355 0.55682 0.77994 0.74922 0.81025 0.706458 0.56439 0.621212 0.61623 NA 0.830357 0.604573 0.62500 0.772727 0.77273 0.740260 0.68852 0.72985 0.634596 0.672605 0.77349 0.859848 0.621212 0.575758 0.753480 0.70453 0.690635 0.71606 0.725717 0 0.68596 0.70769 -0.0145237 5 0.68908 0.70454 -0.0154603 0.810151 0.4182654 insignificant 1 1 insignificant 0.93191 0.221814 insignificant 1 1 insignificant -0.0469401 0.250836 lowCoverage 1 lowCoverage 0.68596 0.723776 -0.0379542 5 0.68908 0.724876 -0.035798 9.1352e-01 0.19560 insignificant 1.0000e+00 1 insignificant 7.2631e-01 0.56761 insignificant 1.0000e+00 1 insignificant -0.0108464 8.2597e-01 lowCoverage 1.0000e+00 lowCoverage 0.68596 0.73063 -0.0431911 5 0.68908 0.73058 -0.04150324 9.7889e-01 0.11355003 insignificant 1.00000000 1.00000 insignificant 0.9388538 0.22185931 insignificant 1.00000 1.00000 insignificant -0.040448 0.10461614 lowCoverage 1.000000 lowCoverage 0.70769 0.723776 -0.0221227 5 0.70454 0.724876 -0.020338 8.1908e-01 0.32441 insignificant 1.0000e+00 1 insignificant 3.5659e-01 0.83684 insignificant 1.0000e+00 1 insignificant 0.036094 5.1338e-01 lowCoverage 1.0000e+00 lowCoverage 0.70769 0.73063 -0.027891 5 0.70454 0.73058 -0.0260429 9.3471e-01 0.1276155 insignificant 1.0000e+00 1.00000 insignificant 0.51090483 0.708670 insignificant 1.000000 1 insignificant 0.0064916 0.851114 lowCoverage 1 lowCoverage 0.723776 0.73063 -0.0043793 5 0.724876 0.73058 -0.0057052 0.78930 3.7506e-01 insignificant 1 1.0000e+00 insignificant 0.93329 4.0603e-01 insignificant 1 1.0000e+00 insignificant -0.029602 5.1955e-01 lowCoverage 1.00000000 lowCoverage chr11 103515674 103516674 109704 DDI1 ENSG00000170967 0.71350 91 5 0.63509 67 5 0.80903 51 5 0.816484 69 5 0.79804 32 1 0.84110 74 5 0.54737 31 1 0.75440 63 5 0.62907 31 1 0.76182 33 5 0.85361 180 5 0.33333 8 0 0.888889 35 5 0.920000 29 5 0.93109 45 5 0.86667 7 0 1.00000 6 0 0.83874 92 5 0.75366 63 5 0.770854 77 5 0.62926 42 5 0.852778 44 4 0.90708 69 5 0.71355 54 5 0.89667 49 5 0.744281 102 5 0.454545 35 1 0.870370 27 1 0.73810 50 5 0.618552 88 5 0.86812 104 5 0.68851 113 5 0.828571 46 5 0.806044 70 5 0.805138 67 5 0.6333333 17 0 0.59325 44 1 0.759810 132 5 0.80874 86 5 0.90838 103 5 0.782468 66 5 1.00000 28 5 0.807594 106 5 0.77969 0.71378 0.79018 0.883381 0.81571 0.80988 0.63158 0.76388 0.837571 0.822165 0.83046 0.62921 0.910112 0.950562 0.937589 0.69288 1.00000 0.84417 0.78072 0.832947 0.83874 0.862734 0.92755 0.80462 0.903558 0.794843 0.56384 0.840824 0.83173 0.786952 0.86475 0.76803 0.871589 0.828528 0.84020 0.589888 0.774612 0.808978 0.817821 0.93090 0.829722 1.00000 0.864328 1 0.78875 0.80824 -0.0120066 5 0.74216 0.76378 -0.0216179 0.655328 0.6535699 insignificant 1 1 insignificant 0.35820 0.819564 insignificant 1 1 insignificant 0.0246528 0.640185 lowCoverage 1 lowCoverage 0.79016 0.811170 -0.0070638 5 0.80769 0.729231 0.078461 3.3837e-01 0.74684 insignificant 1.0000e+00 1 insignificant 4.8319e-02 0.92435 inconclusive 1.0000e+00 1 insignificant 0.0354456 5.1385e-01 lowCoverage 1.0000e+00 lowCoverage 0.78791 0.85604 -0.0703777 5 0.69658 0.86660 -0.17001540 9.9611e-01 0.01680576 weaklyHypometh 1.00000000 1.00000 insignificant 0.9717446 0.11288594 insignificant 1.00000 1.00000 insignificant -0.088299 0.12491002 lowCoverage 1.000000 lowCoverage 0.81014 0.811170 0.0051993 5 0.81234 0.729231 0.083110 5.3549e-01 0.73514 insignificant 1.0000e+00 1 insignificant 3.6719e-01 0.94903 insignificant 1.0000e+00 1 insignificant 0.010793 8.5255e-01 lowCoverage 1.0000e+00 lowCoverage 0.80884 0.85604 -0.055136 5 0.72901 0.86660 -0.1375885 9.8829e-01 0.0452049 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.99772193 0.045639 weaklyHypometh 1.000000 1 insignificant -0.1129520 0.072179 lowCoverage 1 lowCoverage 0.812834 0.85567 -0.0564699 5 0.775077 0.83991 -0.0648378 0.99602 2.2191e-02 weaklyHypometh 1 6.7245e-01 insignificant 0.99967 7.8191e-03 weaklyHypometh 1 4.1771e-01 insignificant -0.123745 6.0762e-02 lowCoverage 1.00000000 lowCoverage chr11 106660500 106661500 109789 GUCY1A2 ENSG00000152402 0.68393 267 7 0.65751 107 7 0.57325 132 7 0.619191 139 7 0.74490 64 7 0.66244 279 7 0.65420 89 7 0.68379 106 7 0.63152 88 7 0.68044 106 7 0.66989 213 7 0.59295 75 7 0.686723 146 7 NA 0 0 0.72440 86 7 0.47619 54 7 0.55952 84 7 0.71466 124 7 0.59259 143 7 0.619715 252 7 0.67619 38 6 0.688889 71 7 0.63157 175 7 0.75561 55 7 0.69821 61 7 0.614295 159 7 0.667857 79 7 0.765079 40 5 0.64068 117 7 0.683250 168 7 0.71774 169 7 0.66976 361 7 0.610364 104 7 0.515482 156 7 0.635627 131 7 0.5899725 100 7 0.63966 62 7 0.633404 175 7 0.72017 268 7 0.72204 258 7 0.715281 206 7 0.67460 240 7 0.713733 248 7 0.68886 0.67600 0.58085 0.624935 0.75879 0.67505 0.65334 0.68240 0.638907 0.688127 0.67665 0.60012 0.690203 NA 0.729888 0.48958 0.56282 0.72036 0.60593 0.629823 0.67923 0.689786 0.64108 0.76698 0.699101 0.622242 0.67341 0.763761 0.65072 0.697183 0.72206 0.67604 0.609966 0.518299 0.62759 0.588757 0.639036 0.632334 0.732283 0.73437 0.718064 0.67758 0.717041 7 0.65153 0.67515 -0.0187307 7 0.65039 0.66888 -0.0184976 0.726936 0.0667542 insignificant 1 1 insignificant 0.88660 0.018428 weaklyHypometh 1 1 insignificant -0.0405252 0.051496 insignificant 1 insignificant 0.65153 0.598901 0.0436040 7 0.65039 0.601645 0.048740 1.9895e-04 0.94585 weaklyHypermeth 1.2434e-02 1 weaklyHypermeth 1.2537e-02 0.85316 weaklyHypermeth 7.8354e-01 1 insignificant 0.0394847 1.3277e-01 insignificant 1.0000e+00 insignificant 0.65153 0.69508 -0.0586250 7 0.65039 0.70966 -0.05927013 9.8138e-01 0.00087203 weaklyHypometh 1.00000000 0.43602 insignificant 0.9993426 0.00096909 weaklyHypometh 1.00000 0.48455 insignificant -0.065596 0.00106078 weaklyHypometh 0.117864 insignificant 0.67515 0.598901 0.0631546 7 0.66888 0.601645 0.067238 6.3354e-05 0.97744 weaklyHypermeth 5.2795e-03 1 weaklyHypermeth 2.6773e-03 0.98950 weaklyHypermeth 2.6773e-01 1 insignificant 0.080010 6.7812e-03 weaklyHypermeth 5.2163e-01 insignificant 0.67515 0.69508 -0.040053 7 0.66888 0.70966 -0.0407725 9.7821e-01 0.0198929 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.97293088 0.057116 insignificant 1.000000 1 insignificant -0.0250707 0.135133 insignificant 1 insignificant 0.598901 0.69508 -0.1001127 7 0.601645 0.70966 -0.1080102 0.99961 1.1896e-05 weaklyHypometh 1 1.3218e-03 weaklyHypometh 0.99974 8.2667e-04 weaklyHypometh 1 1.0333e-01 insignificant -0.105081 1.7220e-03 weaklyHypometh 0.24599906 insignificant chr11 107436551 107437551 109807 CUL5 ENSG00000166266 0.63882 156 5 0.59471 110 5 0.54455 68 5 0.631590 116 5 0.46190 34 5 0.62031 219 5 0.60547 86 5 0.52877 98 5 0.52073 83 5 0.69222 81 5 0.64993 91 5 0.68667 61 5 0.659702 115 5 NA 0 0 0.57755 84 5 0.63333 27 5 0.55476 40 5 0.73250 62 5 0.64294 134 5 0.650039 184 5 0.69048 27 3 0.649447 76 5 0.56608 77 5 0.55195 45 4 0.54857 29 5 0.603701 189 5 0.638636 41 4 0.800000 21 2 0.56362 90 5 0.628681 161 5 0.62364 159 5 0.59337 224 5 0.530274 116 5 0.473269 72 5 0.582490 106 5 0.6551282 51 5 0.58952 32 5 0.536897 231 5 0.68229 153 5 0.65295 140 5 0.660910 100 5 0.60846 160 5 0.592259 104 5 0.65819 0.62077 0.56652 0.668496 0.45674 0.63885 0.64120 0.54397 0.541893 0.705126 0.68687 0.70664 0.695537 NA 0.597717 0.67778 0.58385 0.74714 0.67652 0.687953 0.66464 0.672996 0.57382 0.59464 0.556863 0.630547 0.64550 0.830065 0.58183 0.662849 0.65563 0.62370 0.543813 0.494797 0.60539 0.668720 0.608434 0.565418 0.702267 0.67077 0.691352 0.62845 0.618157 4 0.63169 0.62599 0.0103492 5 0.62071 0.61048 0.0102292 0.446826 0.8820338 insignificant 1 1 insignificant 0.68190 0.529597 insignificant 1 1 insignificant -0.0095938 0.711897 lowCoverage 1 lowCoverage 0.63169 0.564145 0.0703932 5 0.62071 0.548352 0.072359 1.3010e-05 0.99578 weaklyHypermeth 9.2928e-04 1 weaklyHypermeth 7.7004e-04 0.97650 weaklyHypermeth 7.8978e-02 1 weaklyHypermeth 0.0506570 1.2238e-01 lowCoverage 1.0000e+00 lowCoverage 0.63169 0.65297 -0.0202017 5 0.62071 0.64105 -0.02034158 8.1078e-01 0.15747622 insignificant 1.00000000 1.00000 insignificant 0.8630717 0.11719969 insignificant 1.00000 1.00000 insignificant -0.027452 0.25299079 lowCoverage 1.000000 lowCoverage 0.62599 0.564145 0.0589144 5 0.61048 0.548352 0.062130 2.7437e-03 0.99091 weaklyHypermeth 1.1432e-01 1 insignificant 1.9327e-02 0.96232 weaklyHypermeth 7.6812e-01 1 insignificant 0.060251 9.0931e-02 lowCoverage 1.0000e+00 lowCoverage 0.62599 0.65297 -0.029375 5 0.61048 0.64105 -0.0305708 9.3034e-01 0.1014915 insignificant 1.0000e+00 1.00000 insignificant 0.88373187 0.308428 insignificant 1.000000 1 insignificant -0.0178586 0.511877 lowCoverage 1 lowCoverage 0.564145 0.65297 -0.0832488 5 0.548352 0.64105 -0.0927011 0.99496 1.4270e-05 weaklyHypometh 1 1.4270e-03 weaklyHypometh 0.98834 1.9753e-03 weaklyHypometh 1 1.7957e-01 insignificant -0.078109 3.2368e-02 weaklyHypometh 1.00000000 insignificant chr11 111239876 111240876 109960 ENSG00000211113 0.93076 376 6 0.88516 133 6 0.90046 73 6 0.955204 156 6 0.97222 27 2 0.94750 228 6 0.93333 34 3 0.92149 108 6 0.93864 79 6 0.85218 72 6 0.91372 225 6 0.91667 17 1 0.921823 157 6 0.833333 6 1 0.91456 88 5 0.50556 33 4 0.96000 18 3 0.83507 173 6 0.94414 158 6 0.926515 269 6 0.95662 77 6 0.860470 86 6 0.84765 200 6 0.90952 53 6 0.94437 55 6 0.902863 118 6 0.851666 107 6 0.885714 36 4 0.90104 106 6 0.959978 138 6 0.89783 107 6 0.92612 285 6 0.931068 97 6 0.839269 134 6 0.671091 277 6 0.9444444 37 3 0.83132 69 6 0.913682 121 6 0.96590 195 6 0.93261 277 6 0.937357 215 6 0.91535 215 6 0.906902 278 6 0.93585 0.89662 0.88132 0.953351 0.98259 0.94128 0.94179 0.92616 0.948909 0.839097 0.90955 0.94776 0.932995 NA 0.912026 0.53483 0.95183 0.84228 0.94364 0.927249 0.95829 0.875421 0.84255 0.92260 0.952849 0.897423 0.85878 0.895949 0.89624 0.966663 0.90127 0.92295 0.938596 0.848875 0.67783 0.937811 0.843235 0.924877 0.963355 0.93080 0.940154 0.91172 0.897635 1 0.92016 0.89985 0.0198809 6 0.91732 0.89848 0.0188364 0.029877 0.9360876 weaklyHypermeth 1 1 insignificant 0.18531 0.900737 insignificant 1 1 insignificant -0.0082366 0.743080 lowCoverage 1 lowCoverage 0.92016 0.810884 0.1045554 6 0.91732 0.792516 0.124801 6.4202e-06 0.75976 weaklyHypermeth 5.8365e-04 1 weaklyHypermeth 2.5930e-01 0.65094 insignificant 1.0000e+00 1 insignificant 0.0402714 4.1768e-01 lowCoverage 1.0000e+00 lowCoverage 0.92016 0.92542 -0.0045781 6 0.91732 0.92846 -0.01114168 6.2120e-01 0.38344897 insignificant 1.00000000 1.00000 insignificant 0.6121692 0.51358968 insignificant 1.00000 1.00000 insignificant -0.036207 0.15283207 lowCoverage 1.000000 lowCoverage 0.89985 0.810884 0.0917003 6 0.89848 0.792516 0.105965 5.1454e-04 0.11292 weaklyHypermeth 2.9057e-02 1 weaklyHypermeth 3.7954e-01 0.31687 insignificant 1.0000e+00 1 insignificant 0.048508 3.0466e-01 insignificant 1.0000e+00 insignificant 0.89985 0.92542 -0.027006 6 0.89848 0.92846 -0.0299781 9.8060e-01 0.0976230 insignificant 1.0000e+00 1.00000 insignificant 0.89019215 0.322031 insignificant 1.000000 1 insignificant -0.0279706 0.087061 insignificant 1 insignificant 0.810884 0.92542 -0.1187046 6 0.792516 0.92846 -0.1359431 0.48172 1.1884e-03 weaklyHypometh 1 7.7185e-02 weaklyHypometh 0.56504 1.7720e-01 insignificant 1 1.0000e+00 insignificant -0.076479 1.2784e-01 insignificant 1.00000000 insignificant chr11 111240075 111241075 109961 ENSG00000211113 0.87909 403 9 0.84431 161 9 0.83179 105 9 0.907914 211 9 0.93386 46 5 0.89710 310 9 0.82857 44 4 0.86432 141 9 0.90981 103 9 0.88294 82 7 0.86709 281 9 0.70988 30 2 0.879981 184 9 0.797619 21 2 0.79489 114 7 0.48519 40 4 0.97500 23 3 0.77734 204 8 0.72202 171 8 0.878932 327 9 0.91553 83 6 0.840313 97 7 0.83269 240 9 0.84709 64 6 0.94704 72 8 0.886000 170 9 0.835238 123 8 0.902041 46 5 0.80625 117 7 0.901423 181 9 0.85966 155 9 0.85058 372 9 0.867177 128 9 0.881735 155 8 0.733294 325 9 0.8333333 41 3 0.82684 74 7 0.834606 166 9 0.85028 228 8 0.89735 322 8 0.852825 244 8 0.87690 240 8 0.872575 316 8 0.90657 0.87211 0.84714 0.927738 0.95964 0.91476 0.88275 0.89394 0.931207 0.858368 0.88473 0.82859 0.907990 0.881986 0.846818 0.51829 0.96064 0.80928 0.82184 0.901002 0.93543 0.861624 0.83528 0.88595 0.952764 0.889163 0.84847 0.881348 0.84510 0.933307 0.87970 0.88207 0.902156 0.870422 0.71073 0.881813 0.823684 0.879434 0.900372 0.91179 0.893253 0.89128 0.880492 1 0.88504 0.87326 0.0101657 9 0.86273 0.85808 0.0046561 0.108769 0.8227968 insignificant 1 1 insignificant 0.46714 0.671531 insignificant 1 1 insignificant -0.0352715 0.193325 insignificant 1 insignificant 0.88504 0.802025 0.0790803 9 0.86273 0.788022 0.074710 5.5731e-05 0.61571 weaklyHypermeth 3.7154e-03 1 weaklyHypermeth 3.5154e-01 0.71459 insignificant 1.0000e+00 1 insignificant 0.0038844 9.0384e-01 insignificant 1.0000e+00 insignificant 0.88504 0.90000 -0.0060002 8 0.86273 0.86763 -0.00489517 6.3089e-01 0.38214031 insignificant 1.00000000 1.00000 insignificant 0.7408261 0.28562180 insignificant 1.00000 1.00000 insignificant -0.036605 0.15878061 insignificant 1.000000 insignificant 0.87326 0.802025 0.0738735 9 0.85808 0.788022 0.070054 1.5969e-03 0.20557 weaklyHypermeth 6.9431e-02 1 weaklyHypermeth 3.7403e-01 0.49339 insignificant 1.0000e+00 1 insignificant 0.039156 1.4451e-01 insignificant 1.0000e+00 insignificant 0.87326 0.90000 -0.018696 8 0.85808 0.86763 -0.0095513 8.9079e-01 0.1459045 insignificant 1.0000e+00 1.00000 insignificant 0.80871653 0.357799 insignificant 1.000000 1 insignificant -0.0013333 0.929083 insignificant 1 insignificant 0.802025 0.90000 -0.0953021 8 0.788022 0.86763 -0.0796053 0.33852 2.1592e-03 weaklyHypometh 1 1.2701e-01 insignificant 0.38998 1.2474e-01 insignificant 1 1.0000e+00 insignificant -0.040489 1.2266e-01 insignificant 1.00000000 insignificant chr11 111847468 111848468 109988 ENSG00000213233 0.87160 171 5 0.80885 228 5 0.66211 209 5 0.886698 50 4 0.91626 90 4 0.86240 220 5 0.90273 160 5 0.65577 147 5 0.75855 147 5 0.74531 124 5 0.86399 239 5 0.83449 146 5 0.865108 167 5 0.000000 1 0 0.87263 146 5 0.90825 113 5 0.74110 86 5 0.76422 55 4 0.86911 123 5 0.828013 201 5 0.89451 65 4 0.748333 31 3 0.84014 168 5 0.76216 79 5 0.89333 19 2 0.851065 214 6 0.830556 98 5 0.775176 64 5 0.79554 145 5 0.828413 228 5 0.84726 214 5 0.94678 319 5 0.052381 282 5 0.060936 163 5 0.000000 327 5 0.0888889 34 3 0.12137 101 5 0.045128 317 6 0.63953 237 6 0.75471 246 6 0.800161 122 4 0.77402 125 5 0.670254 135 6 0.87617 0.77803 0.65486 0.860082 0.87883 0.90623 0.88707 0.76631 0.796692 0.874703 0.84236 0.82426 0.811794 NA 0.833551 0.88778 0.74797 0.69527 0.83476 0.811268 0.86339 0.754952 0.91403 0.76276 0.916952 0.843505 0.84590 0.921321 0.70851 0.830738 0.85708 0.93349 0.048204 0.055875 0.00000 0.067302 0.109823 0.035745 0.646049 0.72863 0.738159 0.72676 0.695513 3 0.81792 0.86922 -0.0510216 5 0.81100 0.85541 -0.0444103 0.993465 0.0087693 weaklyHypometh 1 1 insignificant 0.86094 0.191588 insignificant 1 1 insignificant -0.0535787 0.272210 lowCoverage 1 lowCoverage 0.81792 0.034314 0.7842566 5 0.81100 0.059536 0.751461 2.9554e-69 1.00000 hypermethylated 2.9554e-66 1 hypermethylated 1.6332e-16 1.00000 hypermethylated 1.6332e-13 1 hypermethylated 0.7194094 1.9500e-13 lowCoverage 9.7502e-11 lowCoverage 0.81792 0.69017 0.1248585 5 0.81100 0.69606 0.11494154 3.2327e-06 0.97763251 weaklyHypermeth 0.00064654 1.00000 weaklyHypermeth 0.0010107 0.98469459 weaklyHypermeth 0.16845 1.00000 insignificant 0.053124 0.33950455 lowCoverage 1.000000 lowCoverage 0.86922 0.034314 0.8341418 5 0.85541 0.059536 0.795872 1.3307e-62 1.00000 hypermethylated 1.3307e-59 1 hypermethylated 9.4265e-14 1.00000 hypermethylated 9.4265e-11 1 hypermethylated 0.772988 1.9118e-14 lowCoverage 1.9118e-11 lowCoverage 0.86922 0.69017 0.171718 5 0.85541 0.69606 0.1593518 1.0309e-09 0.9993831 weaklyHypermeth 5.1543e-07 1.00000 weaklyHypermeth 0.00030582 0.997006 weaklyHypermeth 0.050971 1 weaklyHypermeth 0.1067030 0.021013 lowCoverage 1 lowCoverage 0.034314 0.69017 -0.6514319 5 0.059536 0.69606 -0.6365197 1.00000 1.6672e-32 hypomethylated 1 1.6672e-29 hypomethylated 1.00000 1.1462e-09 hypomethylated 1 5.7308e-07 hypomethylated -0.666285 9.2112e-07 lowCoverage 0.00092112 lowCoverage chr11 112240252 112241252 110039 ENSG00000211166 0.917714 344 5 0.832954 149 5 0.76111 42 5 0.947645 286 5 0.95000 34 5 0.939574 321 5 0.976389 56 5 0.9626880 75 5 0.583333 26 3 0.966667 29 5 0.94643 143 5 0.80000 9 0 0.912778 36 5 1.000000 15 0 0.911111 64 5 0.9166667 12 0 NA 0 0 0.738932 410 5 0.936453 175 5 0.946979 277 5 0.920000 19 3 1.000000 14 0 0.841005 125 5 0.857143 28 3 0.95178 140 5 0.960227 143 5 1.000000 31 5 1.000000 21 2 0.93541 123 5 0.948816 185 5 0.934320 195 5 0.91441 216 5 0.6740910 144 5 0.211594 107 5 1.000000 49 3 0.812000 115 5 0.506340 87 5 0.2906780 300 5 0.830088 262 5 0.86512 235 5 0.883160 348 5 0.8549418 303 5 0.8489338 221 5 0.918853 0.847172 0.7590580 0.948188 0.959239 0.944662 0.9807518 0.9649242 0.5769928 0.9637681 0.95361 0.771739 0.914855 1.000000 0.927536 0.9049899 NA 0.892707 0.935136 0.950722 0.910870 1.0000000 0.830673 1.000000 0.957855 0.9641798 1.000000 1.000000 0.935309 0.9538519 0.9393786 0.894400 0.685400 0.2066568 1.000000 0.811087 0.522421 0.251126 0.847210 0.873851 0.8894056 0.8595480 0.863366 0 0.921263 0.931285 -0.0087208 5 0.919608 0.930341 -0.0107323 0.833219 1.0644e-01 insignificant 1 1.000000 insignificant 0.968378 2.3942e-02 weaklyHypometh 1 1.000000 insignificant -0.04662248 0.10922301 lowCoverage 1.00000 lowCoverage 0.921263 0.481297 0.4439521 5 0.919608 0.480575 0.4390332 1.2679e-21 1.0000e+00 hypermethylated 9.0565e-20 1.0000000 hypermethylated 2.8217e-05 0.99999592 hypermethylated 1.0077e-03 1.00000 hypermethylated 0.30951911 5.4907e-02 lowCoverage 7.8438e-01 lowCoverage 0.921263 0.864134 0.0594102 5 0.919608 0.857677 0.0619318 2.6558e-04 0.99887748 weaklyHypermeth 6.8097e-03 1.000000 weaklyHypermeth 7.8595e-04 0.9998675 weaklyHypermeth 3.1438e-02 1.0000 weaklyHypermeth 0.0355209 1.7781e-01 lowCoverage 1.0000e+00 lowCoverage 0.931285 0.481297 0.4606091 5 0.930341 0.480575 0.44976556 8.0013e-16 1.00000000 hypermethylated 5.3342e-14 1.00000 hypermethylated 1.9553e-06 1.000000 hypermethylated 1.1502e-04 1 hypermethylated 0.356142 3.4946e-02 lowCoverage 4.6595e-01 lowCoverage 0.931285 0.864134 0.0644719 5 0.93034 0.857677 0.0726641 2.1127e-05 0.9982827 weaklyHypermeth 8.8030e-04 1.00000 weaklyHypermeth 3.5477e-06 0.9999991 weaklyHypermeth 4.2717e-04 1 weaklyHypermeth 0.0821434 2.5457e-04 lowCoverage 0.02545660 lowCoverage 0.481297 0.864134 -0.3759420 5 0.480575 0.857677 -0.3771015 1.0000e+00 1.6156e-05 hypomethylated 1.0000e+00 5.7699e-04 hypomethylated 9.9947e-01 2.9397e-02 weaklyHypometh 1.0000e+00 5.0685e-01 insignificant -0.273998 7.8764e-02 lowCoverage 1.0000e+00 lowCoverage chr11 113467647 113468647 110142 ENSG00000221112 0.587298 308 8 0.614783 217 8 0.60673 161 7 0.413804 275 8 0.41020 58 6 0.481798 283 8 0.668870 102 7 0.5625540 190 8 0.447587 177 7 0.576022 103 5 0.79685 213 8 0.40823 75 4 0.491566 187 6 0.750000 4 0 0.375665 148 5 0.5494424 81 4 0.3653885 153 5 0.397041 274 8 0.491856 145 8 0.485001 291 7 0.453418 110 6 0.076163 227 5 0.470204 174 6 0.573007 119 5 0.46151 210 8 0.463071 286 8 0.600730 193 8 0.461934 93 6 0.54345 194 8 0.436485 360 8 0.315104 355 8 0.73830 331 8 0.6270374 212 8 0.587689 147 8 0.580500 362 7 0.364356 101 6 0.599209 156 8 0.2894837 340 8 0.039758 539 8 0.09227 391 8 0.028367 408 8 0.1319359 370 8 0.0931851 408 8 0.609134 0.584438 0.5969431 0.431666 0.539008 0.461227 0.6142768 0.5903800 0.5114887 0.5843687 0.78071 0.608564 0.397476 0.542202 0.388921 0.6676682 0.403185 0.404578 0.481575 0.413116 0.571466 0.1071342 0.507682 0.686939 0.473949 0.4836466 0.620971 0.661718 0.567727 0.4920628 0.3598893 0.767779 0.743823 0.6357656 0.790268 0.410566 0.839333 0.399834 0.036023 0.078950 0.0369946 0.1010952 0.095302 4 0.518433 0.489241 0.0231098 8 0.518921 0.469965 0.0489566 0.022192 9.0628e-01 weaklyHypermeth 1 1.000000 insignificant 0.035197 2.9692e-01 weaklyHypermeth 1 1.000000 insignificant 0.05791914 0.29664381 insignificant 1.00000 insignificant 0.518433 0.528116 -0.0589841 8 0.518921 0.484236 0.0346850 2.6107e-04 2.3334e-04 weaklyHypometh 3.3047e-03 0.0777786 weaklyHypometh 2.4356e-01 0.01107452 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.01598810 8.1107e-01 insignificant 1.0000e+00 insignificant 0.518433 0.064272 0.4528110 8 0.518921 0.067338 0.4515828 2.0983e-35 1.00000000 hypermethylated 1.0492e-32 1.000000 hypermethylated 9.9872e-17 1.0000000 hypermethylated 4.9936e-14 1.0000 hypermethylated 0.4469310 2.1967e-11 hypermethylated 1.0983e-08 hypermethylated 0.489057 0.527715 -0.0750431 8 0.417746 0.430432 -0.01268584 1.4382e-01 0.07906903 insignificant 1.0000e+00 1.00000 insignificant 5.2637e-01 0.058757 insignificant 1.0000e+00 1 insignificant -0.041931 5.8553e-01 insignificant 1.0000e+00 insignificant 0.489241 0.064272 0.4261751 8 0.46996 0.067338 0.4026262 6.6932e-21 1.0000000 hypermethylated 1.6733e-18 1.00000 hypermethylated 3.3010e-14 1.0000000 hypermethylated 1.6505e-11 1 hypermethylated 0.3890118 2.0812e-06 hypermethylated 0.00104058 hypermethylated 0.528116 0.064272 0.4638832 8 0.484236 0.067338 0.4168978 4.1332e-14 1.0000e+00 hypermethylated 4.1332e-11 1.0000e+00 hypermethylated 1.3599e-08 1.0000e+00 hypermethylated 1.3599e-05 1.0000e+00 hypermethylated 0.430943 4.0971e-04 hypermethylated 3.4142e-02 hypermethylated chr11 113581134 113582134 110172 ENSG00000221112 0.870921 201 6 0.496827 86 5 0.79400 69 5 0.759593 120 6 0.76311 46 4 0.767742 176 5 0.651848 58 4 0.8768189 70 4 0.552309 49 4 0.679309 43 4 0.79773 192 5 0.64881 31 3 0.679861 81 5 0.916667 12 2 0.776079 74 4 0.7375000 38 4 0.7484615 48 4 0.936646 142 6 0.644689 123 5 0.709889 119 5 0.892677 41 4 0.902244 55 4 0.875626 136 6 0.693182 36 3 0.86000 21 3 0.774448 158 5 0.896503 68 4 0.752381 27 4 0.87185 68 4 0.904908 148 5 0.895269 100 5 0.72771 173 5 0.7403727 84 4 0.718063 56 5 0.874755 83 5 0.902778 33 2 0.573260 44 4 0.7745963 111 5 0.942380 195 6 0.86387 178 6 0.861480 180 6 0.9076123 161 6 0.8653223 138 6 0.834709 0.657967 0.6760426 0.887303 0.789697 0.833655 0.7089241 0.8389730 0.7291108 0.8134121 0.87156 0.634070 0.840788 0.843988 0.875231 0.6923469 0.764861 0.914167 0.803842 0.859520 0.811491 0.8500131 0.828989 0.820544 0.935374 0.8436173 0.901527 0.831746 0.854199 0.8574734 0.8404529 0.842909 0.693109 0.7594177 0.839386 0.918934 0.797793 0.745404 0.921518 0.872623 0.8211986 0.8878619 0.878617 3 0.822835 0.844811 -0.0279040 5 0.755569 0.808721 -0.0531514 0.959860 7.9343e-02 insignificant 1 1.000000 insignificant 0.999688 6.4469e-03 weaklyHypometh 1 1.000000 insignificant -0.09679298 0.00754487 lowCoverage 0.94311 lowCoverage 0.822835 0.768856 0.0461632 4 0.755569 0.697926 0.0576432 3.0819e-02 9.8349e-01 lowCoverage 2.9074e-01 1.0000000 lowCoverage 6.9470e-01 0.81605795 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.02353069 6.7868e-01 lowCoverage 1.0000e+00 lowCoverage 0.823828 0.906103 -0.0610267 5 0.781875 0.903079 -0.1212033 9.9894e-01 0.01113080 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9797e-01 0.0068943 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.1476929 6.8954e-05 lowCoverage 6.8954e-03 lowCoverage 0.844811 0.768856 0.0739652 4 0.808721 0.697926 0.11079457 9.6102e-05 0.99089669 lowCoverage 1.2850e-03 1.00000 lowCoverage 4.0872e-02 0.994568 lowCoverage 4.2575e-01 1 lowCoverage 0.073262 2.1158e-01 lowCoverage 1.0000e+00 lowCoverage 0.844055 0.906103 -0.0361553 5 0.78140 0.903079 -0.1216834 9.9728e-01 0.0386952 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.2361e-01 0.3748710 insignificant 1.0000e+00 1 insignificant -0.0508999 8.4453e-02 lowCoverage 1.00000000 lowCoverage 0.770171 0.906103 -0.1117164 4 0.726201 0.903079 -0.1768772 9.9961e-01 1.1792e-05 lowCoverage 1.0000e+00 4.7168e-04 lowCoverage 9.8036e-01 5.0631e-02 lowCoverage 1.0000e+00 7.5569e-01 lowCoverage -0.124162 5.0842e-02 lowCoverage 7.8583e-01 lowCoverage chr11 113590559 113591559 110175 ENSG00000221112 0.794756 216 5 0.777924 143 5 0.77733 128 5 0.820149 159 5 0.70278 46 5 0.788051 225 5 0.819481 118 5 0.8470766 124 5 0.663932 143 5 0.853178 123 5 0.77652 157 5 0.85109 76 5 0.772050 141 5 NA 0 0 0.791593 129 5 0.6833333 33 5 0.7062745 91 5 0.725379 132 5 0.879814 138 5 0.806869 165 5 0.920000 25 3 0.743044 69 5 0.840000 126 5 0.920000 76 5 0.96071 52 4 0.832910 179 5 0.906667 41 5 0.986667 49 3 0.82643 139 5 0.852593 241 5 0.841163 200 5 0.80963 318 5 0.7040452 125 5 0.715604 83 5 0.610526 47 2 0.766667 34 5 0.832867 56 5 0.6627685 206 5 0.830278 175 5 0.82579 230 5 0.789808 180 5 0.7577931 249 5 0.8650000 162 5 0.818273 0.800114 0.7978750 0.848564 0.741354 0.813600 0.8465774 0.8610523 0.6848211 0.8647984 0.80137 0.871198 0.790580 NA 0.811544 0.7109375 0.726789 0.749412 0.896374 0.827212 0.935000 0.7665091 0.867000 0.935000 0.953237 0.8569948 0.907917 0.987500 0.843137 0.8775198 0.8646158 0.826012 0.711095 0.7291834 0.658553 0.802083 0.845236 0.687507 0.856157 0.852480 0.8160437 0.7839941 0.890312 5 0.785283 0.823762 -0.0468176 5 0.788730 0.834817 -0.0460877 0.999935 2.3000e-03 weaklyHypometh 1 0.328573 insignificant 0.999994 2.4105e-05 weaklyHypometh 1 0.017454 weaklyHypometh -0.08905939 0.00150820 lowCoverage 0.50273 lowCoverage 0.785283 0.686025 0.0801107 5 0.788730 0.706455 0.0822741 1.2219e-04 9.6539e-01 weaklyHypermeth 1.6078e-03 1.0000000 weaklyHypermeth 1.1860e-01 0.78092825 insignificant 1.0000e+00 1.00000 insignificant 0.06551223 1.0089e-01 lowCoverage 1.0000e+00 lowCoverage 0.785283 0.817269 -0.0207122 5 0.788730 0.809137 -0.0204076 9.0179e-01 0.05541350 insignificant 1.0000e+00 1.000000 insignificant 9.3494e-01 0.0224270 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0328096 1.8763e-01 lowCoverage 1.0000e+00 lowCoverage 0.823762 0.686025 0.1282943 5 0.834817 0.706455 0.12836172 5.7582e-06 0.99909762 weaklyHypermeth 9.7597e-05 1.00000 weaklyHypermeth 2.3988e-03 0.993439 weaklyHypermeth 4.0657e-02 1 weaklyHypermeth 0.154572 2.5589e-03 lowCoverage 6.9159e-02 lowCoverage 0.823762 0.817269 0.0273159 5 0.83482 0.809137 0.0256800 2.4636e-01 0.7086000 insignificant 1.0000e+00 1.00000 insignificant 2.1293e-02 0.8851250 weaklyHypermeth 4.8394e-01 1 insignificant 0.0562498 5.9823e-02 lowCoverage 1.00000000 lowCoverage 0.686025 0.817269 -0.0990487 5 0.706455 0.809137 -0.1026817 9.9765e-01 2.4924e-03 weaklyHypometh 1.0000e+00 4.2973e-02 weaklyHypometh 9.8225e-01 4.0849e-02 weaklyHypometh 1.0000e+00 6.6908e-01 insignificant -0.098322 2.8640e-02 lowCoverage 5.1143e-01 lowCoverage chr11 113624366 113625366 110185 ENSG00000221112 0.772772 249 5 0.858225 149 5 0.90264 113 5 0.941443 148 5 0.90643 75 5 0.631875 403 5 0.618467 71 4 0.8187013 99 4 0.813040 77 5 0.772024 66 5 0.91088 172 5 0.76923 54 3 0.883947 99 5 0.750000 4 0 0.736364 51 3 0.7775758 48 4 0.7999206 137 4 0.903657 214 5 0.929133 116 5 0.696824 238 5 0.916667 38 4 0.923636 75 5 0.928407 147 5 0.975000 49 5 0.91032 48 4 0.895524 178 5 0.881944 67 3 0.871429 56 5 0.85256 113 5 0.973626 187 5 0.948277 146 5 0.91044 351 5 0.6515536 117 5 0.746685 103 5 0.891212 69 2 0.663889 32 3 0.672380 103 5 0.8357671 196 5 0.868011 227 5 0.94846 241 5 0.950090 156 5 0.9213996 194 5 0.9389329 202 5 0.849472 0.876121 0.9073456 0.951737 0.905591 0.848261 0.7545213 0.8374348 0.8526579 0.9121386 0.91130 0.718101 0.885534 NA 0.804834 0.8869048 0.868171 0.883759 0.924551 0.870189 0.869048 0.8777056 0.923725 0.918750 0.887566 0.9117617 0.851687 0.902636 0.910521 0.9692079 0.9550890 0.903086 0.741091 0.6693161 0.871537 0.814484 0.838032 0.839462 0.939216 0.962404 0.9602526 0.9189222 0.946213 2 0.859853 0.914777 -0.0578058 5 0.798042 0.909434 -0.1113915 0.999990 1.2371e-04 weaklyHypometh 1 0.061853 weaklyHypometh 0.999772 3.4908e-05 weaklyHypometh 1 0.017454 weaklyHypometh -0.10599482 0.00013909 lowCoverage 0.13909 lowCoverage 0.859853 0.785484 0.0765881 5 0.798042 0.707150 0.0908921 1.4541e-05 9.7693e-01 weaklyHypermeth 2.1960e-04 1.0000000 weaklyHypermeth 1.2757e-03 0.93685232 weaklyHypermeth 2.6035e-02 1.00000 weaklyHypermeth 0.06607623 1.9010e-01 lowCoverage 1.0000e+00 lowCoverage 0.860637 0.920588 -0.0712541 5 0.843365 0.923857 -0.0804921 9.9975e-01 0.00017555 weaklyHypometh 1.0000e+00 0.058517 weaklyHypometh 9.9735e-01 0.0000633 weaklyHypometh 1.0000e+00 0.0633 weaklyHypometh -0.1157204 2.8072e-04 lowCoverage 2.1594e-02 lowCoverage 0.914777 0.785484 0.1325938 5 0.909434 0.707150 0.20228354 1.8876e-10 0.99999999 weaklyHypermeth 6.3310e-09 1.00000 weaklyHypermeth 1.1060e-06 1.000000 weaklyHypermeth 7.3735e-05 1 weaklyHypermeth 0.172071 7.3044e-03 lowCoverage 1.5541e-01 lowCoverage 0.914997 0.920588 -0.0136219 5 0.91632 0.923857 -0.0075366 7.9516e-01 0.1428240 insignificant 1.0000e+00 1.00000 insignificant 7.1723e-01 0.0942668 insignificant 1.0000e+00 1 insignificant -0.0097255 6.1699e-01 lowCoverage 1.00000000 lowCoverage 0.787682 0.920588 -0.1474504 5 0.781914 0.923857 -0.1419436 9.9992e-01 2.8922e-07 weaklyHypometh 1.0000e+00 2.2248e-05 weaklyHypometh 9.9997e-01 5.5242e-06 weaklyHypometh 1.0000e+00 7.8917e-04 weaklyHypometh -0.181797 5.2564e-03 lowCoverage 1.9468e-01 lowCoverage chr11 115001681 115002681 110541 CADM1 ENSG00000182985 0.893074 219 6 0.825771 211 6 0.83188 99 6 0.868047 191 6 0.79563 35 2 0.870031 219 6 0.798295 51 4 0.9285714 95 6 0.892133 58 6 0.876667 41 3 0.88930 202 6 0.80000 16 1 0.897727 70 5 0.975000 20 1 0.871624 55 5 0.3333333 7 1 0.5625000 12 1 0.728947 232 6 0.888298 77 4 0.882273 193 6 0.868056 54 4 0.757949 50 5 0.746741 136 6 0.541126 39 2 0.86775 120 5 0.866089 171 6 0.772860 85 6 0.833333 19 0 0.89007 95 5 0.768428 160 6 0.807500 184 6 0.88463 259 6 0.8582875 162 6 0.838060 128 6 0.248571 50 3 0.609524 27 3 0.885989 81 4 0.8533819 225 6 0.627088 167 6 0.69671 182 6 0.640083 188 5 0.6610429 144 5 0.6229665 185 6 0.872297 0.845116 0.8246612 0.843445 0.860627 0.868205 0.7406689 0.8831301 0.8064536 0.8542683 0.86616 0.702526 0.818182 0.917370 0.807004 0.3400500 0.646235 0.794503 0.925272 0.878329 0.871951 0.7971857 0.758269 0.496305 0.821367 0.8448765 0.782920 0.853659 0.854176 0.9092237 0.8114143 0.911936 0.819060 0.8833265 0.296851 0.631678 0.833981 0.893265 0.514565 0.676790 0.6271769 0.5774875 0.637945 1 0.834047 0.831510 0.0034610 6 0.828301 0.810975 0.0173252 0.294631 9.0202e-01 insignificant 1 1.000000 insignificant 0.210784 9.3508e-01 insignificant 1 1.000000 insignificant 0.02007806 0.64028917 lowCoverage 1.00000 lowCoverage 0.834286 0.802377 0.0287862 6 0.855239 0.807048 0.0481918 9.3606e-02 7.0378e-01 insignificant 8.3577e-01 1.0000000 insignificant 2.4297e-01 0.90691621 insignificant 1.0000e+00 1.00000 insignificant 0.10481980 3.6502e-01 lowCoverage 1.0000e+00 lowCoverage 0.834047 0.570439 0.2552726 6 0.828301 0.672320 0.1559803 1.0056e-16 0.99407041 hypermethylated 2.0113e-14 1.000000 hypermethylated 2.2973e-07 0.9990550 hypermethylated 2.8716e-05 1.0000 hypermethylated 0.1708778 5.7878e-05 lowCoverage 6.4309e-03 lowCoverage 0.831871 0.802377 0.0258573 6 0.835027 0.807048 0.02797909 4.2756e-01 0.72236419 insignificant 1.0000e+00 1.00000 insignificant 7.5994e-01 0.743128 insignificant 1.0000e+00 1 insignificant 0.084742 4.5516e-01 lowCoverage 1.0000e+00 lowCoverage 0.831510 0.570439 0.2536364 6 0.81098 0.672320 0.1386551 3.3882e-09 0.9984871 hypermethylated 2.6063e-07 1.00000 hypermethylated 6.9835e-05 0.9986638 hypermethylated 4.6556e-03 1 hypermethylated 0.1507997 2.2993e-04 lowCoverage 0.02545660 lowCoverage 0.802377 0.569444 0.2161873 6 0.807048 0.617707 0.1893407 2.7334e-05 9.9934e-01 hypermethylated 6.8334e-03 1.0000e+00 hypermethylated 1.1384e-02 9.9872e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.066058 5.4860e-01 lowCoverage 1.0000e+00 lowCoverage chr11 115116977 115117977 110565 ENSG00000211200 0.766263 287 5 0.626610 236 5 0.68333 37 4 0.600480 247 5 0.46886 33 2 0.737220 330 5 0.500000 29 2 0.5332159 108 5 0.640670 71 5 0.467424 60 5 0.73861 162 5 0.75333 14 2 0.322306 108 5 0.727879 38 5 0.312546 78 5 0.0000000 12 1 0.4166667 11 1 0.694959 407 5 0.609298 109 5 0.502999 198 5 0.738776 55 5 0.530797 116 5 0.501766 104 5 0.838095 86 5 0.47271 219 7 0.486024 228 5 0.536769 89 5 0.458333 25 2 0.73620 141 5 0.743601 298 5 0.494154 257 5 0.71754 234 5 0.4972656 160 5 0.512968 162 5 0.493827 405 3 0.621922 121 4 0.358957 107 6 0.4012751 236 5 0.582668 252 5 0.79599 188 5 0.643522 336 5 0.5709970 222 5 0.4563690 199 5 0.701180 0.581900 0.5408696 0.692686 0.593311 0.782905 0.5950311 0.5366719 0.5521781 0.6044796 0.69458 0.640000 0.451407 0.668538 0.452391 NA 0.556965 0.686194 0.559322 0.473549 0.840994 0.5390989 0.702368 0.815321 0.773132 0.6441483 0.607441 0.446377 0.689929 0.6448523 0.4480315 0.678141 0.690024 0.5439341 0.650418 0.745737 0.493747 0.520925 0.615447 0.733848 0.5568159 0.6047263 0.584611 2 0.667184 0.682703 -0.0092604 5 0.488199 0.511118 -0.0229187 0.776470 6.3763e-01 insignificant 1 1.000000 insignificant 0.937540 2.5058e-01 insignificant 1 1.000000 insignificant -0.04943061 0.40379788 lowCoverage 1.00000 lowCoverage 0.667184 0.646218 0.0508615 5 0.488199 0.419027 0.0691720 2.8395e-01 8.1929e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.1297e-01 0.85250161 insignificant 1.0000e+00 1.00000 insignificant 0.07409799 2.0983e-01 lowCoverage 1.0000e+00 lowCoverage 0.667184 0.611529 0.0593705 5 0.488199 0.503916 -0.0157175 8.5287e-03 0.25728480 weaklyHypermeth 1.6401e-01 1.000000 insignificant 2.1372e-01 0.1444965 insignificant 1.0000e+00 1.0000 insignificant -0.0547755 4.5350e-01 lowCoverage 1.0000e+00 lowCoverage 0.682505 0.645676 0.0630924 5 0.509882 0.372468 0.13741394 5.1393e-01 0.96096918 insignificant 1.0000e+00 1.00000 insignificant 2.6931e-01 0.991496 insignificant 1.0000e+00 1 insignificant 0.123529 4.0074e-02 lowCoverage 5.2044e-01 lowCoverage 0.682703 0.611529 0.0796185 5 0.51112 0.503916 0.0072012 6.4127e-02 0.4261227 insignificant 8.5503e-01 1.00000 insignificant 1.6425e-01 0.6018541 insignificant 1.0000e+00 1 insignificant -0.0053449 9.3939e-01 lowCoverage 1.00000000 lowCoverage 0.646218 0.611529 0.0313843 5 0.419027 0.503916 -0.0848895 9.1573e-01 1.2038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9742e-01 5.0067e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.128874 9.4419e-02 lowCoverage 1.0000e+00 lowCoverage chr11 115118915 115119915 110566 ENSG00000211200 0.849993 238 5 0.755257 217 5 0.90476 92 5 0.845567 272 5 0.73882 71 5 0.927936 275 5 0.706018 124 5 0.8437097 182 5 0.783758 186 5 0.856065 201 5 0.84328 143 5 0.73823 72 5 0.897472 229 5 0.933333 104 5 0.830500 193 5 0.8833333 28 2 0.9200000 38 3 0.805031 386 5 0.936011 102 5 0.673065 215 5 0.795833 68 5 0.786974 173 5 0.895483 176 5 0.710278 82 3 0.89199 99 5 0.917410 269 5 0.929790 118 5 0.929990 76 5 0.85265 191 5 0.764980 285 5 0.918041 271 5 0.87487 286 5 0.0928835 202 5 0.063442 152 5 0.000000 87 2 0.061538 53 5 0.165457 108 5 0.1676292 254 5 0.922738 352 5 0.90208 341 5 0.863659 287 5 0.8179610 310 5 0.8867677 343 5 0.849630 0.748661 0.8886545 0.845119 0.736445 0.929469 0.8638777 0.8393904 0.7754730 0.8554786 0.84390 0.891632 0.891902 0.922446 0.822338 0.9099553 0.907383 0.803429 0.942355 0.815452 0.957886 0.7841013 0.887430 0.829642 0.884042 0.9210538 0.929499 0.917656 0.843173 0.9188718 0.9214227 0.867283 0.088607 0.0692048 0.096731 0.070212 0.214249 0.166918 0.920410 0.880611 0.8374884 0.8136944 0.877736 5 0.841746 0.884909 -0.0446630 5 0.736579 0.785190 -0.0486107 0.997513 1.6905e-03 weaklyHypometh 1 0.281747 insignificant 0.941151 2.1516e-02 weaklyHypometh 1 1.000000 insignificant -0.02208443 0.43234961 lowCoverage 1.00000 lowCoverage 0.841746 0.110981 0.7267508 5 0.736579 0.093487 0.6430918 1.9403e-67 9.9999e-01 hypermethylated 1.9403e-64 1.0000000 hypermethylated 7.2025e-13 0.99999997 hypermethylated 1.9170e-10 1.00000 hypermethylated 0.74178158 6.1273e-10 lowCoverage 1.2255e-07 lowCoverage 0.841746 0.866503 -0.0241352 5 0.736579 0.893040 -0.1564604 9.9335e-01 0.03710795 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.3513e-01 0.2413539 insignificant 1.0000e+00 1.0000 insignificant -0.0450353 9.7740e-02 lowCoverage 1.0000e+00 lowCoverage 0.884909 0.110981 0.7717380 5 0.785190 0.093487 0.69170250 2.1293e-49 0.99999472 hypermethylated 2.1293e-46 1.00000 hypermethylated 1.0723e-11 1.000000 hypermethylated 2.6808e-09 1 hypermethylated 0.763866 1.0116e-10 lowCoverage 1.0116e-07 lowCoverage 0.884909 0.866503 0.0210693 5 0.78519 0.893040 -0.1078497 3.7626e-01 0.4678183 insignificant 1.0000e+00 1.00000 insignificant 1.8275e-01 0.5676746 insignificant 1.0000e+00 1 insignificant -0.0229508 4.2418e-01 lowCoverage 1.00000000 lowCoverage 0.110981 0.866503 -0.7590579 5 0.093487 0.893040 -0.7995522 1.0000e+00 1.5995e-28 hypomethylated 1.0000e+00 1.5995e-25 hypomethylated 1.0000e+00 4.7093e-08 hypomethylated 1.0000e+00 4.7093e-05 hypomethylated -0.786817 4.1249e-09 lowCoverage 4.1249e-06 lowCoverage chr11 115583028 115584028 110675 ENSG00000211200 0.843226 442 10 0.735363 203 10 0.84943 223 10 0.906493 301 10 0.73333 74 8 0.933937 387 10 0.904718 249 10 0.8406608 235 10 0.874386 180 10 0.951573 166 7 0.86952 281 10 0.91978 158 7 0.939463 172 7 0.857955 57 4 0.928971 227 10 0.9510547 74 4 0.7666667 67 4 0.716680 451 10 0.911272 252 10 0.882080 356 10 0.905359 121 7 0.680342 130 10 0.908417 262 10 0.938485 86 7 0.92342 137 10 0.941257 259 7 0.890112 215 10 0.818679 124 8 0.78056 216 10 0.931723 283 7 0.808356 250 7 0.88037 440 10 0.4753216 231 10 0.346360 228 10 0.126623 115 5 0.528571 35 4 0.272200 186 10 0.7124077 321 10 0.355997 362 10 0.57109 337 10 0.620731 288 10 0.3253740 262 7 0.5606677 291 10 0.831074 0.789442 0.8359352 0.910822 0.777183 0.920811 0.8887312 0.8663976 0.8536905 0.9327276 0.89760 0.874086 0.875725 0.859698 0.902867 0.9085617 0.717133 0.713820 0.907453 0.886523 0.912121 0.6555694 0.914822 0.925401 0.950059 0.9287648 0.907957 0.925295 0.855344 0.9212853 0.8538496 0.893764 0.482380 0.3383747 0.218116 0.428480 0.352033 0.728041 0.323303 0.610134 0.6081366 0.3883906 0.606852 4 0.853568 0.880301 -0.0227390 10 0.880884 0.796154 0.0847294 0.886814 3.8651e-01 insignificant 1 1.000000 insignificant 0.933918 2.0475e-01 insignificant 1 1.000000 insignificant -0.00142875 0.96034693 insignificant 1.00000 insignificant 0.853535 0.430108 0.4288212 10 0.868972 0.461637 0.4073349 4.3968e-44 1.0000e+00 hypermethylated 2.1984e-41 1.0000000 hypermethylated 2.3573e-17 1.00000000 hypermethylated 2.2645e-14 1.00000 hypermethylated 0.45558074 2.5315e-03 weaklyHypermeth 7.0319e-02 weaklyHypermeth 0.853568 0.496753 0.3576017 10 0.880884 0.504746 0.3761375 3.1380e-45 1.00000000 hypermethylated 3.1380e-42 1.000000 hypermethylated 1.8373e-19 1.0000000 hypermethylated 1.8373e-16 1.0000 hypermethylated 0.3790555 2.3815e-03 weaklyHypermeth 1.0825e-01 insignificant 0.880650 0.430108 0.4529502 10 0.875770 0.461637 0.41413258 3.9403e-30 1.00000000 hypermethylated 7.8807e-28 1.00000 hypermethylated 1.2022e-15 1.000000 hypermethylated 1.2022e-12 1 hypermethylated 0.457009 2.2159e-03 weaklyHypermeth 6.3310e-02 weaklyHypermeth 0.880301 0.496753 0.3815739 10 0.79615 0.504746 0.2914081 1.8101e-31 1.0000000 hypermethylated 1.8101e-28 1.00000 hypermethylated 2.1203e-16 1.0000000 hypermethylated 2.1203e-13 1 hypermethylated 0.3804843 1.7995e-03 weaklyHypermeth 0.11246971 insignificant 0.430108 0.496749 -0.0644094 10 0.461637 0.505221 -0.0435837 9.5019e-01 3.0274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8392e-01 1.3967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.076525 4.8080e-01 insignificant 1.0000e+00 insignificant chr11 115760499 115761499 110719 ENSG00000211210 0.896729 299 9 0.799318 204 9 0.80106 138 9 0.923646 247 9 0.77110 111 7 0.884132 307 9 0.848425 101 7 0.7772944 151 9 0.827899 86 4 0.756497 102 9 0.90122 392 11 0.80643 58 5 0.934573 134 5 0.581992 70 5 0.815833 124 10 0.8503788 31 1 0.8583333 26 1 0.850578 223 9 0.879991 167 7 0.776581 278 9 0.752661 88 4 0.923309 94 6 0.855840 138 11 0.603952 96 8 0.81349 59 5 0.885493 253 11 0.708616 92 6 0.720468 37 2 0.69274 164 7 0.920841 224 10 0.816385 220 10 0.85640 323 11 0.6384100 143 7 0.850734 118 5 0.610671 370 7 0.906250 25 1 0.495153 98 5 0.8250033 185 8 0.833834 221 9 0.92377 228 11 0.884765 182 9 0.9173218 151 9 0.9425110 194 11 0.857265 0.803877 0.6846877 0.916574 0.891301 0.824829 0.8131302 0.8681659 0.8203089 0.8534265 0.86810 0.693383 0.932939 0.867736 0.807924 0.6899123 0.719737 0.867654 0.872901 0.870493 0.853509 0.9107609 0.876226 0.806269 0.880159 0.8782201 0.773264 0.728565 0.924917 0.8969592 0.8407929 0.853925 0.696658 0.6343996 0.490472 0.836842 0.751842 0.783440 0.929933 0.916886 0.8990390 0.8545763 0.958334 2 0.845183 0.857543 -0.0080841 9 0.773691 0.767461 0.0062307 0.203950 5.6867e-01 insignificant 1 1.000000 insignificant 0.314087 7.2808e-01 insignificant 1 1.000000 insignificant 0.03125083 0.36629119 insignificant 1.00000 insignificant 0.845396 0.582090 0.2443865 7 0.790797 0.625958 0.1648388 3.6719e-09 9.3047e-01 hypermethylated 8.9559e-08 1.0000000 hypermethylated 6.4437e-03 0.85162562 weaklyHypermeth 1.0068e-01 1.00000 insignificant 0.10606310 1.7539e-01 insignificant 1.0000e+00 insignificant 0.845396 0.924103 -0.0685238 7 0.790797 0.908667 -0.1178702 9.9893e-01 0.02117300 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9738e-01 0.0259015 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0733403 1.5207e-02 weaklyHypometh 4.6197e-01 insignificant 0.857623 0.581470 0.2567850 7 0.767461 0.589137 0.17832347 2.2134e-06 0.91763424 hypermethylated 4.2565e-05 1.00000 hypermethylated 2.8541e-02 0.851119 weaklyHypermeth 3.0911e-01 1 insignificant 0.074812 3.3573e-01 insignificant 1.0000e+00 insignificant 0.858586 0.924180 -0.0605917 7 0.79099 0.914040 -0.1230497 9.9999e-01 0.0427959 weaklyHypometh 1.0000e+00 1.00000 insignificant 1.0000e+00 0.0799767 insignificant 1.0000e+00 1 insignificant -0.1045912 8.7093e-03 weaklyHypometh 0.35642313 insignificant 0.582090 0.924103 -0.3148838 5 0.625958 0.908667 -0.2827089 9.9949e-01 3.4236e-03 weaklyHypometh 1.0000e+00 5.7060e-02 weaklyHypometh 9.9988e-01 5.2720e-02 insignificant 1.0000e+00 7.7530e-01 insignificant -0.179403 4.1896e-02 weaklyHypometh 6.7574e-01 insignificant chr11 115864654 115865654 110745 ENSG00000211210 0.937776 142 5 0.875364 167 5 0.66480 179 5 0.899653 79 5 0.86426 91 5 0.952639 130 5 0.818357 105 5 0.7476766 182 5 0.797927 129 5 0.920622 102 5 0.90393 180 5 0.76687 107 5 0.799305 150 5 NA 0 0 0.904738 118 5 0.8000000 33 5 0.8152047 62 3 0.841458 65 5 0.797729 109 5 0.932012 167 5 0.958609 99 5 0.861111 26 2 0.884404 145 5 0.866429 53 5 0.81714 32 5 0.915255 153 5 0.919813 78 5 0.987500 61 5 0.90138 135 5 0.931770 184 5 0.910331 206 5 0.95310 221 5 0.6780121 199 5 0.612667 96 5 0.406667 107 5 0.689444 66 5 0.739105 62 5 0.6189528 156 5 0.888848 95 5 0.85723 177 5 0.869173 59 5 0.8611629 137 5 0.7819308 102 5 0.936877 0.874068 0.6763107 0.896621 0.885185 0.949472 0.8332884 0.7471004 0.7835976 0.9255128 0.90524 0.770131 0.791108 NA 0.910160 0.8340426 0.837595 0.848671 0.795790 0.928769 0.950463 0.8470745 0.884027 0.873607 0.803647 0.9066172 0.922833 0.988364 0.889024 0.9344061 0.9017692 0.948165 0.655908 0.6249113 0.357624 0.705009 0.745598 0.639749 0.876500 0.850835 0.8647016 0.8649936 0.775280 5 0.839356 0.921752 -0.0830039 5 0.838215 0.921051 -0.0828355 0.999569 1.1417e-05 weaklyHypometh 1 0.011417 weaklyHypometh 0.971442 1.2158e-03 weaklyHypometh 1 0.405276 insignificant -0.06467604 0.00650458 lowCoverage 0.94311 lowCoverage 0.839356 0.591837 0.2474405 5 0.838215 0.597789 0.2404263 1.4063e-08 1.0000e+00 hypermethylated 3.1961e-07 1.0000000 hypermethylated 1.4064e-05 0.99999759 hypermethylated 5.6254e-04 1.00000 hypermethylated 0.22008625 4.1717e-03 lowCoverage 1.1275e-01 lowCoverage 0.839356 0.847368 -0.0067252 5 0.838215 0.853550 -0.0153351 5.1297e-01 0.40534292 insignificant 1.0000e+00 1.000000 insignificant 3.5671e-01 0.4914140 insignificant 1.0000e+00 1.0000 insignificant -0.0074415 7.7268e-01 lowCoverage 1.0000e+00 lowCoverage 0.921752 0.591837 0.3233713 5 0.921051 0.597789 0.32326177 9.0005e-12 1.00000000 hypermethylated 3.6002e-10 1.00000 hypermethylated 4.1977e-08 0.999999 hypermethylated 5.9709e-06 1 hypermethylated 0.284762 1.3179e-03 lowCoverage 4.2513e-02 lowCoverage 0.921752 0.847368 0.0665376 5 0.92105 0.853550 0.0675003 2.1597e-04 0.9999322 weaklyHypermeth 6.7491e-03 1.00000 weaklyHypermeth 1.1882e-02 0.9977910 weaklyHypermeth 3.0468e-01 1 insignificant 0.0572345 3.4009e-02 lowCoverage 0.85021772 lowCoverage 0.591837 0.847368 -0.2664511 5 0.597789 0.853550 -0.2557614 9.9995e-01 5.9260e-04 hypomethylated 1.0000e+00 1.3905e-02 hypomethylated 9.9992e-01 1.3173e-03 weaklyHypometh 1.0000e+00 6.2727e-02 weaklyHypometh -0.227528 3.6181e-03 weaklyHypometh 1.4472e-01 insignificant chr11 116737126 116738126 110807 CEP164 ENSG00000110274 0.828375 202 6 0.736409 81 8 0.80204 105 7 0.912914 113 5 0.86406 68 6 0.793704 263 8 0.746607 97 7 0.8958333 62 6 0.760734 85 8 0.779972 106 7 0.81529 169 8 0.60343 74 6 0.823836 100 8 NA 0 0 0.734722 88 8 0.6765432 49 6 0.7857008 47 6 0.866802 128 5 0.718638 177 8 0.702498 269 8 0.686786 62 6 0.648897 59 6 0.796246 163 8 0.934713 64 6 0.76852 55 5 0.830443 132 8 0.647569 67 6 0.750000 36 3 0.70352 45 6 0.799530 163 8 0.795510 141 8 0.71709 265 8 0.7176783 142 8 0.768478 126 8 0.600474 133 8 0.870748 45 5 0.632801 66 5 0.8298237 149 8 0.851801 166 7 0.88535 195 8 0.812759 127 6 0.7593193 193 5 0.8207781 159 7 0.796304 0.698413 0.7462531 0.883483 0.853623 0.798461 0.7281536 0.8204134 0.7942772 0.7823291 0.84940 0.673331 0.821439 NA 0.850549 0.6534022 0.750658 0.825095 0.747136 0.787915 0.625051 0.6681031 0.743201 0.940670 0.739664 0.7766933 0.602283 0.740911 0.739693 0.7537583 0.7447851 0.774194 0.711300 0.7038633 0.580623 0.867782 0.710988 0.807603 0.854897 0.894993 0.7988803 0.7749385 0.823612 3 0.789750 0.778754 0.0312704 8 0.776929 0.767552 0.0093776 0.076469 9.5497e-01 insignificant 1 1.000000 insignificant 0.060300 8.2421e-01 insignificant 1 1.000000 insignificant 0.02491001 0.41173111 insignificant 1.00000 insignificant 0.789750 0.724660 0.0703453 8 0.776929 0.750584 0.0263456 7.6801e-04 9.6579e-01 weaklyHypermeth 9.2531e-03 1.0000000 weaklyHypermeth 9.9561e-02 0.95961996 insignificant 1.0000e+00 1.00000 insignificant 0.04481150 3.7544e-01 insignificant 1.0000e+00 insignificant 0.791005 0.828571 -0.0434699 7 0.799045 0.824268 -0.0252229 9.0847e-01 0.03554001 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.2317e-01 0.0101519 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0445237 1.3569e-01 insignificant 1.0000e+00 insignificant 0.778754 0.724660 0.0432719 8 0.767552 0.750584 0.01696799 4.9806e-02 0.83474028 weaklyHypermeth 4.5694e-01 1.00000 insignificant 6.1034e-01 0.831762 insignificant 1.0000e+00 1 insignificant 0.019901 6.9981e-01 insignificant 1.0000e+00 insignificant 0.778761 0.828571 -0.0747479 7 0.76627 0.824268 -0.0579949 9.2494e-01 0.0024793 weaklyHypometh 1.0000e+00 0.82643 insignificant 9.5409e-01 0.0021633 weaklyHypometh 1.0000e+00 1 insignificant -0.0694338 4.7759e-02 weaklyHypometh 1.00000000 insignificant 0.722561 0.828571 -0.1121468 7 0.719407 0.824268 -0.1048617 9.7969e-01 6.8751e-04 weaklyHypometh 1.0000e+00 1.5625e-02 weaklyHypometh 9.8185e-01 4.2165e-03 weaklyHypometh 1.0000e+00 1.3288e-01 insignificant -0.089335 1.0753e-01 insignificant 1.0000e+00 insignificant chr11 116911420 116912420 110818 CEP164 ENSG00000110274 0.742811 167 6 0.830292 210 6 0.76807 165 6 0.750989 108 4 0.74147 102 6 0.864469 207 6 0.838735 123 6 0.6753916 171 6 0.757840 155 6 0.897407 107 6 0.78435 238 6 0.90000 75 5 0.661244 140 6 0.636261 67 3 0.687549 152 6 0.7922078 74 5 0.5212121 29 4 0.837576 100 3 0.809373 155 6 0.864991 140 6 0.800454 86 5 0.824235 50 2 0.811420 141 6 0.671989 118 5 0.98485 26 2 0.871058 184 6 0.711953 116 5 0.542517 55 3 0.63440 114 6 0.863872 240 6 0.832892 202 6 0.88137 227 6 0.3423413 173 6 0.363074 150 6 0.000000 60 1 0.704286 24 2 0.287652 186 6 0.6118748 222 6 0.449773 123 6 0.85514 110 6 0.801894 87 6 0.7918624 104 6 0.7155560 100 6 0.828532 0.821604 0.7062086 0.850841 0.825637 0.855546 0.8243906 0.8236007 0.8645247 0.8693637 0.87508 0.926068 0.786676 0.792115 0.813747 0.9140119 0.900435 0.773948 0.880092 0.854812 0.833876 0.7500860 0.822614 0.828725 0.937737 0.8499346 0.685832 0.774929 0.771293 0.8364998 0.7690116 0.901325 0.271683 0.2900285 0.236884 0.435831 0.220232 0.461413 0.651252 0.825756 0.7348679 0.7993549 0.662249 2 0.829423 0.822322 0.0106523 6 0.726447 0.760494 -0.0340472 0.347941 3.9276e-01 insignificant 1 1.000000 insignificant 0.465229 5.2213e-01 insignificant 1 1.000000 insignificant -0.01780548 0.67328900 lowCoverage 1.00000 lowCoverage 0.829423 0.353374 0.4924613 6 0.726447 0.418034 0.3084130 3.9049e-33 7.1265e-01 hypermethylated 4.3387e-31 1.0000000 hypermethylated 4.1972e-11 0.95327374 hypermethylated 5.9959e-09 1.00000 hypermethylated 0.38324097 1.2411e-02 lowCoverage 2.4335e-01 lowCoverage 0.829423 0.730916 0.0982560 6 0.726447 0.638245 0.0882026 1.1683e-04 0.99988523 weaklyHypermeth 3.2452e-03 1.000000 weaklyHypermeth 1.5460e-03 0.9984123 weaklyHypermeth 5.5214e-02 1.0000 weaklyHypermeth 0.0452679 5.7363e-01 insignificant 1.0000e+00 insignificant 0.822322 0.353374 0.4823650 6 0.760494 0.418034 0.34246017 1.2982e-20 0.99999826 hypermethylated 1.4425e-18 1.00000 hypermethylated 4.7767e-08 1.000000 hypermethylated 5.9709e-06 1 hypermethylated 0.401046 9.3286e-03 lowCoverage 1.9321e-01 lowCoverage 0.822322 0.730916 0.0848105 6 0.76049 0.638245 0.1222498 6.7090e-03 0.9987155 weaklyHypermeth 1.2659e-01 1.00000 insignificant 4.3690e-02 0.9837230 weaklyHypermeth 7.5327e-01 1 insignificant 0.0630733 4.6089e-01 lowCoverage 1.00000000 lowCoverage 0.353374 0.730916 -0.3976034 6 0.418034 0.638245 -0.2202103 9.9833e-01 7.1432e-08 hypomethylated 1.0000e+00 6.4938e-06 hypomethylated 9.9988e-01 1.7479e-04 hypomethylated 1.0000e+00 1.4566e-02 hypomethylated -0.337973 2.5284e-02 lowCoverage 4.9210e-01 lowCoverage chr11 116922350 116923350 110819 CEP164 ENSG00000110274 0.677344 108 2 0.588229 130 6 0.68197 125 6 0.750842 28 2 0.80229 35 2 0.759561 85 2 0.830827 61 2 0.7763158 57 2 0.823671 68 2 0.836667 55 2 0.74603 71 2 0.81438 49 2 0.717057 88 2 NA 0 0 0.826389 42 2 0.8214286 23 2 0.7380952 42 2 0.600529 48 2 0.886762 52 2 0.788760 85 2 0.937500 43 2 0.472222 17 2 0.672487 82 6 0.868750 36 2 0.83333 6 0 0.677712 170 6 0.721429 34 2 0.836538 37 2 0.66058 66 2 0.682824 171 6 0.581823 170 6 0.76628 103 2 0.3861748 183 6 0.385522 60 2 0.209231 99 5 0.583333 15 1 0.627778 33 2 0.4081807 114 6 0.572440 61 2 0.58227 111 6 0.400253 38 2 0.4215909 90 2 0.4023987 69 2 0.783488 0.772141 0.7262027 0.753913 0.806687 0.778022 0.8372304 0.7770388 0.8261931 0.8368498 0.74544 0.812636 0.715881 NA 0.829060 0.8312402 0.739403 0.796791 0.887201 0.791209 0.934066 0.4706960 0.819641 0.872527 0.824176 0.7547618 0.725746 0.841293 0.670773 0.8246059 0.8255896 0.802624 0.323630 0.3867244 0.274971 0.578755 0.632967 0.613775 0.579652 0.747347 0.7072095 0.7614635 0.703788 2 0.759585 0.725134 0.0052325 2 0.661411 0.653753 0.0076578 0.384742 4.9716e-01 lowCoverage 1 1.000000 lowCoverage 0.393471 6.4754e-01 lowCoverage 1 1.000000 lowCoverage 0.03547287 0.40931678 lowCoverage 1.00000 lowCoverage 0.759585 0.396825 0.3301780 2 0.661411 0.372915 0.2884963 6.0650e-12 9.9764e-01 lowCoverage 1.8953e-10 1.0000000 lowCoverage 1.2522e-06 0.99008179 lowCoverage 6.9565e-05 1.00000 lowCoverage 0.32805884 2.4110e-03 lowCoverage 6.8887e-02 lowCoverage 0.759585 0.658537 0.0981936 2 0.661411 0.509130 0.1522805 1.0672e-03 0.99976186 lowCoverage 2.4819e-02 1.000000 lowCoverage 1.3252e-03 0.9999133 lowCoverage 4.9080e-02 1.0000 lowCoverage 0.2856390 9.5304e-04 lowCoverage 5.0160e-02 lowCoverage 0.725134 0.396825 0.3177068 6 0.653753 0.372915 0.28083850 2.5078e-08 0.99956854 hypermethylated 6.5994e-07 1.00000 hypermethylated 2.2699e-05 0.997183 hypermethylated 9.0797e-04 1 hypermethylated 0.292586 3.1092e-03 lowCoverage 7.7731e-02 lowCoverage 0.725134 0.658537 0.0980574 2 0.65375 0.509130 0.1446227 1.9674e-03 0.9990484 lowCoverage 4.4714e-02 1.00000 lowCoverage 1.7263e-03 0.9998119 lowCoverage 6.6394e-02 1 lowCoverage 0.2501661 1.0557e-03 lowCoverage 0.07540626 lowCoverage 0.396825 0.658537 -0.2347263 2 0.372915 0.509130 -0.1362158 9.6741e-01 1.8167e-02 lowCoverage 1.0000e+00 2.5232e-01 lowCoverage 7.0227e-01 2.7243e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.042420 5.8536e-01 lowCoverage 1.0000e+00 lowCoverage chr11 116976086 116977086 110824 CEP164 ENSG00000110274 0.720835 144 6 0.370989 137 6 0.65641 57 4 0.748611 71 6 0.60781 63 6 0.389683 43 6 0.321886 56 6 0.5566774 73 5 0.414550 37 5 0.532870 71 4 0.66165 210 6 0.55000 15 0 0.154762 106 6 0.495238 66 4 0.334938 115 6 0.9696970 31 3 NA 0 0 0.502342 106 6 0.332048 334 6 0.155042 84 6 0.238095 28 3 0.278472 65 5 0.631313 72 6 0.854167 19 2 0.63636 33 3 0.469215 275 6 0.382222 35 3 0.360000 18 2 0.51502 204 6 0.489199 272 6 0.407158 263 6 0.69456 69 5 0.1140285 295 6 0.042105 177 6 0.200000 43 5 0.000000 5 0 0.075337 204 6 0.1384262 421 6 0.440771 139 6 0.53499 149 6 0.301860 131 6 0.3480729 136 6 0.3885836 112 6 0.877703 0.564392 0.6312408 0.926245 0.776753 0.513957 0.4555961 0.6760721 0.5026455 0.7719029 0.82487 0.451149 0.243842 0.623974 0.432843 0.8656320 NA 0.591015 0.383900 0.174877 0.326765 0.4464080 0.675892 0.702492 0.577536 0.6050014 0.512388 0.471264 0.645609 0.6329972 0.5116387 0.879460 0.173654 0.0198427 0.068966 0.087494 0.114190 0.217778 0.541188 0.585227 0.3298683 0.4027164 0.543535 0 0.502474 0.541020 -0.0163185 6 0.467223 0.485093 -0.0178693 0.831112 2.5056e-01 insignificant 1 1.000000 insignificant 0.383706 5.8566e-01 insignificant 1 1.000000 insignificant 0.00242347 0.97279929 lowCoverage 1.00000 lowCoverage 0.502474 0.089956 0.3907790 6 0.467223 0.105651 0.3615722 8.7057e-14 1.0000e+00 hypermethylated 3.3484e-12 1.0000000 hypermethylated 1.0724e-09 0.99999998 hypermethylated 1.1916e-07 1.00000 hypermethylated 0.40375610 2.3523e-07 lowCoverage 2.1385e-05 lowCoverage 0.502474 0.386807 0.0704550 6 0.467223 0.412884 0.0543393 8.3327e-02 0.61548887 insignificant 1.0000e+00 1.000000 insignificant 2.6935e-02 0.8290434 weaklyHypermeth 5.6116e-01 1.0000 insignificant 0.0958842 1.4155e-01 lowCoverage 1.0000e+00 lowCoverage 0.541020 0.089956 0.4225503 6 0.485093 0.105651 0.37944147 5.5056e-20 0.99999999 hypermethylated 5.5056e-18 1.00000 hypermethylated 4.7107e-07 0.999992 hypermethylated 4.2825e-05 1 hypermethylated 0.401333 5.7192e-06 lowCoverage 5.1993e-04 lowCoverage 0.541020 0.386807 0.0939981 6 0.48509 0.412884 0.0722086 1.3558e-03 0.8669599 weaklyHypermeth 3.2281e-02 1.00000 weaklyHypermeth 4.8382e-02 0.6890597 weaklyHypermeth 8.2003e-01 1 insignificant 0.0934607 1.7769e-01 lowCoverage 1.00000000 lowCoverage 0.089956 0.386807 -0.2993631 6 0.105651 0.412884 -0.3072329 1.0000e+00 1.0965e-09 hypomethylated 1.0000e+00 1.3706e-07 hypomethylated 1.0000e+00 4.7567e-06 hypomethylated 1.0000e+00 7.8917e-04 hypomethylated -0.307872 3.1491e-04 lowCoverage 3.4142e-02 lowCoverage chr11 117039124 117040124 110832 CEP164 ENSG00000110274 0.639611 250 6 0.640286 219 6 0.63960 51 4 0.577771 232 6 0.48413 35 2 0.670222 278 6 0.511905 32 3 0.7219673 155 6 0.704762 55 6 0.705357 52 4 0.80341 223 6 0.54444 26 3 0.671311 121 6 0.568627 32 2 0.507692 52 4 1.0000000 6 0 0.8750000 8 0 0.427423 302 6 0.891286 259 6 0.601129 269 6 0.730655 119 6 0.320852 120 4 0.769691 115 6 0.596825 41 6 0.64205 66 4 0.639588 289 6 0.617253 75 6 0.585203 35 2 0.66261 182 6 0.681666 220 6 0.646230 269 6 0.71826 274 6 0.0478395 219 6 0.195474 185 6 0.000000 354 6 0.000000 49 4 0.143155 147 6 0.0106465 381 6 0.214665 344 6 0.25286 228 6 0.194066 255 6 0.3142206 229 6 0.1490204 251 6 0.629773 0.623609 0.6145004 0.554222 0.460317 0.650525 0.5275041 0.7089632 0.6941981 0.6890394 0.79735 0.518774 0.650088 0.624014 0.481344 0.8470015 0.760795 0.417984 0.880313 0.585016 0.715730 0.3943176 0.760781 0.549206 0.629006 0.6244993 0.600325 0.548758 0.641782 0.6668095 0.6287500 0.710224 0.052363 0.2042882 0.000000 0.057906 0.140914 0.012007 0.193237 0.227526 0.1709830 0.3038519 0.139307 0 0.627023 0.643767 -0.0196361 6 0.633843 0.652741 -0.0188978 0.906175 4.2295e-01 insignificant 1 1.000000 insignificant 0.549891 7.1336e-01 insignificant 1 1.000000 insignificant 0.02505633 0.59190662 lowCoverage 1.00000 lowCoverage 0.627023 0.079401 0.5490858 6 0.633843 0.060301 0.5735417 6.6324e-35 1.0000e+00 hypermethylated 8.2905e-33 1.0000000 hypermethylated 7.6681e-13 1.00000000 hypermethylated 1.9170e-10 1.00000 hypermethylated 0.59311111 2.1399e-09 lowCoverage 3.0571e-07 lowCoverage 0.627023 0.206580 0.4192756 6 0.633843 0.223993 0.4098501 2.0360e-22 1.00000000 hypermethylated 5.0901e-20 1.000000 hypermethylated 4.5607e-12 1.0000000 hypermethylated 1.1402e-09 1.0000 hypermethylated 0.4343294 2.1998e-08 lowCoverage 7.3326e-06 lowCoverage 0.643767 0.079401 0.5667828 6 0.652741 0.060301 0.59243954 9.1567e-32 1.00000000 hypermethylated 2.2892e-29 1.00000 hypermethylated 8.5395e-12 1.000000 hypermethylated 2.6808e-09 1 hypermethylated 0.568055 1.5787e-08 hypermethylated 3.1573e-06 hypermethylated 0.643767 0.206580 0.4418142 6 0.65274 0.223993 0.4287479 8.8177e-22 1.0000000 hypermethylated 2.9392e-19 1.00000 hypermethylated 3.3143e-11 1.0000000 hypermethylated 8.2857e-09 1 hypermethylated 0.4092730 2.5155e-07 hypermethylated 0.00025155 hypermethylated 0.079401 0.206580 -0.1214097 6 0.060301 0.223993 -0.1636917 9.9976e-01 2.5648e-10 weaklyHypometh 1.0000e+00 4.2746e-08 weaklyHypometh 9.9966e-01 8.6742e-07 weaklyHypometh 1.0000e+00 2.1685e-04 weaklyHypometh -0.158782 5.7691e-03 weaklyHypometh 2.0604e-01 insignificant chr11 117039297 117040297 110833 CEP164 ENSG00000110274 0.667208 257 6 0.681108 234 8 0.66720 59 4 0.641662 238 6 0.48810 51 4 0.727667 288 8 0.550595 38 3 0.6803644 173 8 0.747321 63 6 0.716518 60 4 0.78438 245 8 0.65833 30 3 0.703483 131 8 0.568627 32 2 0.505769 54 4 1.0000000 8 0 0.8750000 8 0 0.508067 314 8 0.862909 277 8 0.575847 279 8 0.763900 141 8 0.320852 120 4 0.788578 128 8 0.661905 55 8 0.55032 67 4 0.700177 306 8 0.629024 99 8 0.638902 45 4 0.60634 198 8 0.633124 238 8 0.647173 287 8 0.75298 302 8 0.0403439 274 8 0.146605 215 8 0.125000 398 8 0.000000 51 4 0.107366 160 8 0.0079848 419 8 0.181832 356 8 0.21916 245 8 0.194066 255 6 0.3606654 231 6 0.1412792 268 8 0.648282 0.637524 0.6232423 0.565060 0.473630 0.670921 0.5364823 0.6942870 0.7004864 0.6929724 0.79283 0.549821 0.668362 0.633891 0.504053 0.8568724 0.761847 0.442988 0.868919 0.575230 0.723317 0.4110899 0.766742 0.562929 0.596768 0.6408099 0.603252 0.556365 0.636667 0.6504025 0.6236694 0.722775 0.050905 0.1911084 0.030303 0.054171 0.131823 0.011232 0.182562 0.220165 0.1667469 0.2950012 0.137638 0 0.632969 0.652064 -0.0193092 6 0.655394 0.673054 -0.0176596 0.908075 4.4389e-01 insignificant 1 1.000000 insignificant 0.336558 7.0747e-01 insignificant 1 1.000000 insignificant 0.03940118 0.40133208 insignificant 1.00000 insignificant 0.632969 0.085036 0.5519232 6 0.655394 0.076820 0.5785750 1.4388e-43 1.0000e+00 hypermethylated 4.7961e-41 1.0000000 hypermethylated 4.5289e-17 1.00000000 hypermethylated 2.2645e-14 1.00000 hypermethylated 0.60929102 4.8445e-12 hypermethylated 1.6148e-09 hypermethylated 0.632969 0.203690 0.4303682 6 0.655394 0.199734 0.4556605 5.0742e-30 1.00000000 hypermethylated 1.6914e-27 1.000000 hypermethylated 6.5478e-14 1.0000000 hypermethylated 2.1826e-11 1.0000 hypermethylated 0.4611065 2.6804e-06 hypermethylated 6.7010e-04 hypermethylated 0.652064 0.085036 0.5705649 8 0.673054 0.076820 0.59623454 6.4592e-38 1.00000000 hypermethylated 3.2296e-35 1.00000 hypermethylated 5.0989e-15 1.000000 hypermethylated 2.5494e-12 1 hypermethylated 0.569890 6.7286e-10 hypermethylated 3.3643e-07 hypermethylated 0.652064 0.203690 0.4517703 7 0.67305 0.199734 0.4733201 2.0134e-27 1.0000000 hypermethylated 1.0067e-24 1.00000 hypermethylated 2.1350e-12 1.0000000 hypermethylated 7.1166e-10 1 hypermethylated 0.4217054 4.9815e-06 hypermethylated 0.00166051 hypermethylated 0.085036 0.203690 -0.1162176 7 0.076820 0.199734 -0.1229145 9.9687e-01 2.6665e-09 weaklyHypometh 1.0000e+00 2.9628e-07 weaklyHypometh 9.9996e-01 4.2942e-07 weaklyHypometh 1.0000e+00 1.4314e-04 weaklyHypometh -0.148184 1.2980e-02 weaklyHypometh 3.9091e-01 insignificant chr11 117901148 117902148 110884 MLL ENSG00000118058 0.979717 164 6 0.860330 165 7 0.71633 59 6 0.888669 164 3 0.84672 82 6 0.921398 198 6 0.768254 58 6 0.8970738 141 7 0.859940 107 6 0.823659 80 5 0.88819 325 7 0.87375 50 6 0.918097 188 7 0.820988 57 2 0.884014 160 7 0.8694444 28 4 0.7150456 397 2 0.863401 227 5 0.975922 263 6 0.935226 147 5 0.805556 76 6 0.850649 47 2 0.937206 106 6 0.861364 69 6 0.97917 38 2 0.928371 185 6 0.876189 192 6 0.759740 37 4 0.76188 117 5 0.874234 232 6 0.931408 140 6 0.86739 197 7 0.7858951 120 6 0.790380 141 6 0.968056 370 6 0.666667 7 0 0.899421 100 5 0.9685922 160 6 0.782581 59 2 0.96156 154 6 0.832926 114 2 0.9647287 85 2 0.9833887 94 2 0.978755 0.889281 0.7362637 0.881851 0.841584 0.936430 0.8320346 0.9363210 0.8346407 0.8954306 0.89507 0.890723 0.923136 0.956761 0.927862 0.9205368 0.707670 0.891877 0.957739 0.959079 0.930847 0.9332486 0.983555 0.912153 0.965089 0.9616708 0.906402 0.859843 0.865530 0.9166982 0.9249794 0.925793 0.868258 0.9377923 0.946821 0.403581 0.902202 0.964842 0.916820 0.949398 0.8946267 0.9145864 0.969914 2 0.858497 0.926184 -0.0645380 6 0.885013 0.786638 0.0983751 0.693363 8.3470e-02 insignificant 1 1.000000 insignificant 0.872116 9.5112e-02 insignificant 1 1.000000 insignificant -0.00412151 0.87292797 insignificant 1.00000 insignificant 0.858497 0.939866 -0.0524189 6 0.885013 0.786285 0.0987274 9.1722e-01 7.7268e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.5770e-01 0.24005715 insignificant 1.0000e+00 1.00000 insignificant 0.01880642 7.2686e-01 lowCoverage 1.0000e+00 lowCoverage 0.858450 0.928854 -0.0846627 2 0.868586 0.914243 -0.0456572 5.0997e-01 0.22848034 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9648e-01 0.0765728 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.0397294 4.0272e-01 lowCoverage 1.0000e+00 lowCoverage 0.926184 0.939866 -0.0049888 6 0.786638 0.786285 0.00035227 9.0011e-01 0.66199248 insignificant 1.0000e+00 1.00000 insignificant 8.5187e-01 0.811845 insignificant 1.0000e+00 1 insignificant 0.022928 6.7748e-01 lowCoverage 1.0000e+00 lowCoverage 0.927476 0.928854 -0.0011127 2 0.89901 0.914243 -0.0152288 6.2206e-01 0.4885810 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.6800e-01 0.3948380 lowCoverage 1.0000e+00 1 lowCoverage -0.0356078 4.6142e-01 lowCoverage 1.00000000 lowCoverage 0.940914 0.928854 0.0038523 2 0.898612 0.914243 -0.0156314 4.9290e-01 7.1275e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5525e-01 6.1746e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.058536 3.8138e-01 lowCoverage 1.0000e+00 lowCoverage chr11 117901375 117902375 110885 MLL ENSG00000118058 0.976337 160 6 0.870384 150 6 0.70238 54 5 0.897892 158 2 0.86284 74 5 0.908298 187 5 0.824339 52 5 0.9513480 134 6 0.892152 101 5 0.877602 78 5 0.87477 293 6 0.89437 46 6 0.949901 177 6 0.981481 55 2 0.931350 155 6 0.8433333 23 3 0.8342199 393 2 0.840635 226 5 0.971909 262 6 0.942949 138 4 0.907407 70 5 0.825758 46 2 0.974359 99 5 0.866035 63 5 0.96875 34 2 0.924767 165 5 0.888887 187 5 0.963636 34 4 0.83330 114 5 0.867558 197 5 0.928309 120 5 0.86196 187 6 0.8811935 109 5 0.866555 138 6 0.968056 370 6 0.666667 7 0 0.943264 89 4 0.9633575 152 5 0.746345 57 2 0.95516 151 6 0.971747 113 2 0.9647287 85 2 0.9806202 92 2 0.977986 0.892516 0.7339545 0.883609 0.844902 0.934127 0.8549344 0.9495418 0.8407268 0.9097578 0.89240 0.895822 0.930232 0.973310 0.939741 0.9176577 0.733310 0.887960 0.956208 0.961622 0.928341 0.9308300 0.993311 0.915009 0.963824 0.9620937 0.910257 0.872880 0.884812 0.9167856 0.9240729 0.926728 0.863484 0.9596930 0.954227 0.391304 0.911834 0.963568 0.913806 0.947564 0.9270408 0.9205497 0.968824 2 0.861797 0.930851 -0.0627360 5 0.881649 0.900545 -0.0188964 0.404624 7.6835e-02 insignificant 1 1.000000 insignificant 0.878653 6.2248e-02 insignificant 1 1.000000 insignificant -0.00946982 0.65637062 lowCoverage 1.00000 lowCoverage 0.861797 0.945665 -0.0543543 5 0.881649 0.912964 -0.0313151 8.0261e-01 2.8412e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.4705e-01 0.12035615 insignificant 1.0000e+00 1.00000 insignificant 0.00990909 8.4524e-01 lowCoverage 1.0000e+00 lowCoverage 0.861797 0.929719 -0.0846607 2 0.881649 0.920784 -0.0391350 4.0169e-01 0.24277513 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9079e-01 0.1025022 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.0322951 5.2254e-01 lowCoverage 1.0000e+00 lowCoverage 0.930851 0.945665 -0.0093332 5 0.900545 0.912964 -0.01241873 9.0224e-01 0.39460323 insignificant 1.0000e+00 1.00000 insignificant 7.1240e-01 0.636783 insignificant 1.0000e+00 1 insignificant 0.019379 7.0419e-01 lowCoverage 1.0000e+00 lowCoverage 0.930851 0.929719 -0.0013965 2 0.90055 0.920784 -0.0202386 5.9694e-01 0.4232270 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.3524e-01 0.4905149 lowCoverage 1.0000e+00 1 lowCoverage -0.0228253 6.4791e-01 lowCoverage 1.00000000 lowCoverage 0.945665 0.929719 0.0051396 2 0.912964 0.920784 -0.0078199 4.1295e-01 7.1858e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3214e-01 5.9902e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.042204 5.2787e-01 lowCoverage 1.0000e+00 lowCoverage chr11 118284842 118285842 110897 CXCR5 ENSG00000160683 0.074984 250 5 0.092017 410 9 0.11857 544 10 0.016492 316 9 0.11868 467 11 0.154238 474 8 0.070833 337 10 0.2223414 447 10 0.018633 505 9 0.020751 477 9 0.12346 450 10 0.07559 417 9 0.103519 332 9 0.031185 355 9 0.109768 486 9 0.1236435 333 9 0.2212500 66 4 0.079770 391 6 0.067661 286 9 0.108425 329 7 0.121686 233 11 0.101595 260 10 0.036894 234 9 0.138631 300 10 0.19416 183 6 0.089913 556 10 0.094878 475 10 0.060732 368 9 0.15517 295 6 0.077325 599 10 0.019989 441 9 0.13143 403 9 0.0122435 339 10 0.070000 156 8 0.125000 523 7 0.000000 51 5 0.181854 286 11 0.0000000 313 9 0.292099 335 5 0.09538 284 5 0.002924 214 5 0.0088905 224 5 0.0069444 222 5 0.045009 0.029095 0.0415452 0.023403 0.026026 0.033990 0.0326096 0.0430769 0.0217070 0.0267859 0.05052 0.028012 0.023995 0.048353 0.018259 0.0465065 0.023765 0.021365 0.022752 0.026959 0.092247 0.0056863 0.058658 0.018315 0.052323 0.0229502 0.066961 0.037784 0.051175 0.0222715 0.0256152 0.039543 0.013815 0.0016750 0.146360 0.000000 0.034188 0.000000 0.023842 0.012388 0.0035705 0.0075019 0.008096 5 0.033498 0.038417 -0.0064510 9 0.125821 0.126899 -0.0010783 0.839032 1.9863e-01 insignificant 1 1.000000 insignificant 0.634447 2.9525e-01 insignificant 1 1.000000 insignificant -0.00427583 0.82638777 insignificant 1.00000 insignificant 0.033498 0.012590 0.0147459 9 0.125821 0.123351 0.0024696 2.1456e-02 9.9076e-01 weaklyHypermeth 2.0631e-01 1.0000000 insignificant 7.1299e-03 0.99962874 weaklyHypermeth 1.0333e-01 1.00000 insignificant 0.03274082 3.6035e-01 insignificant 1.0000e+00 insignificant 0.033613 0.010946 0.0281932 5 0.139606 0.166537 -0.0269310 9.5833e-04 0.78462655 weaklyHypermeth 2.2817e-02 1.000000 weaklyHypermeth 1.8205e-03 0.9921581 weaklyHypermeth 6.0683e-02 1.0000 weaklyHypermeth 0.0163427 7.8702e-01 insignificant 1.0000e+00 insignificant 0.038417 0.012590 0.0202232 9 0.126899 0.123351 0.00354794 2.9951e-02 0.99659081 weaklyHypermeth 2.8256e-01 1.00000 insignificant 2.8747e-02 0.999592 weaklyHypermeth 3.0911e-01 1 insignificant 0.037017 3.1144e-01 insignificant 1.0000e+00 insignificant 0.038237 0.010946 0.0344301 5 0.13397 0.166537 -0.0325719 3.9712e-02 0.9266900 weaklyHypermeth 5.6732e-01 1.00000 insignificant 6.3477e-02 0.9974514 insignificant 1.0000e+00 1 insignificant 0.0206185 7.3512e-01 insignificant 1.00000000 insignificant 0.012151 0.010946 0.0016298 5 0.100324 0.166537 -0.0662133 9.8929e-01 8.0567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9482e-01 7.8703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.016398 8.0427e-01 insignificant 1.0000e+00 insignificant chr11 118297623 118298623 110905 BCL9L ENSG00000186174 0.599282 62 4 0.536483 72 5 0.49603 89 5 0.501429 53 4 0.41399 67 5 0.595539 126 5 0.284119 92 5 0.4995192 96 6 0.441667 73 5 0.426531 101 4 0.40275 158 5 0.30480 59 5 0.428732 77 4 0.586108 69 5 0.348299 60 5 0.4916667 35 3 0.0833333 10 0 0.338420 67 4 0.454198 144 5 0.732743 119 6 0.515253 111 6 0.306723 40 3 0.532684 65 4 0.322540 85 5 0.54167 23 2 0.569784 140 5 0.650928 144 5 0.296537 84 6 0.44046 112 5 0.392843 112 6 0.426963 104 5 0.76116 208 5 0.0454545 113 4 0.091837 98 5 0.000000 123 5 0.000000 17 1 0.156566 137 6 0.1458333 200 6 0.489143 72 5 0.54161 107 5 0.529412 26 1 0.5827381 37 4 0.6484848 43 5 0.648215 0.364380 0.5010441 0.598901 0.594437 0.542614 0.4312523 0.6971735 0.6115385 0.6266401 0.57131 0.437848 0.683809 0.560158 0.386447 0.5777244 0.397720 0.502695 0.578405 0.680042 0.687458 0.4982873 0.662719 0.598596 0.532431 0.6090353 0.533181 0.597070 0.602532 0.5914876 0.4843320 0.636589 0.013112 0.0137363 0.000000 0.010666 0.129996 0.000000 0.643387 0.508187 0.4027149 0.6739011 0.524476 2 0.547575 0.565961 -0.0276566 5 0.362784 0.331409 0.0313759 0.855675 6.9507e-01 insignificant 1 1.000000 insignificant 0.978635 6.2945e-01 insignificant 1 1.000000 insignificant -0.03151310 0.54811607 lowCoverage 1.00000 lowCoverage 0.548923 0.043605 0.5118966 5 0.428745 0.138417 0.2903287 1.5273e-30 9.9797e-01 hypermethylated 1.3884e-28 1.0000000 hypermethylated 4.5271e-09 0.99716402 hypermethylated 3.7726e-07 1.00000 hypermethylated 0.37500026 6.0965e-08 lowCoverage 6.0965e-06 lowCoverage 0.550868 0.526316 0.0367310 4 0.424816 0.512807 -0.0879916 1.2725e-01 0.18347579 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.7055e-01 0.0472088 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.1099964 1.7026e-02 lowCoverage 4.7293e-01 lowCoverage 0.566884 0.043605 0.5245010 5 0.391665 0.138417 0.25324807 2.0729e-27 0.96829744 hypermethylated 2.9612e-25 1.00000 hypermethylated 1.5038e-07 0.991228 hypermethylated 1.5038e-05 1 hypermethylated 0.406513 4.5441e-07 lowCoverage 4.5441e-05 lowCoverage 0.573201 0.526316 0.0620958 4 0.45092 0.512807 -0.0618837 2.6801e-02 0.3541995 lowCoverage 4.3935e-01 1.00000 lowCoverage 1.8516e-01 0.2388320 lowCoverage 1.0000e+00 1 lowCoverage -0.0784833 1.3254e-01 lowCoverage 1.00000000 lowCoverage 0.041237 0.524648 -0.4871341 4 0.148656 0.451908 -0.3032520 9.9954e-01 7.6017e-16 lowCoverage 1.0000e+00 2.5339e-13 lowCoverage 9.9780e-01 3.8558e-06 lowCoverage 1.0000e+00 7.7116e-04 lowCoverage -0.484997 6.1131e-07 lowCoverage 1.5283e-04 lowCoverage chr11 118298033 118299033 110906 BCL9L ENSG00000186174 0.588858 81 5 0.502700 82 6 0.48666 108 6 0.560714 67 5 0.43696 82 6 0.615985 146 6 0.316818 110 6 0.5154457 124 7 0.469792 88 6 0.459947 145 5 0.41561 185 6 0.33112 83 6 0.467340 104 5 0.602844 94 6 0.361580 82 6 0.5203704 47 4 0.0833333 10 0 0.379451 91 5 0.481278 184 6 0.720579 137 7 0.505395 135 7 0.335049 55 4 0.568371 76 5 0.364988 104 6 0.53571 33 3 0.564675 161 6 0.653176 201 6 0.336219 106 7 0.45827 134 6 0.402585 118 7 0.440900 117 6 0.75277 243 6 0.0378788 135 5 0.080357 119 6 0.000000 130 6 0.000000 25 2 0.143519 148 7 0.1250000 240 7 0.495400 83 6 0.54510 123 6 0.580065 44 2 0.5920635 46 5 0.6077922 54 6 0.610833 0.344637 0.4765134 0.678095 0.616587 0.621545 0.4864090 0.6805165 0.6284444 0.6575007 0.55512 0.469686 0.723984 0.609176 0.407330 0.6305556 0.469782 0.552980 0.623361 0.658903 0.604416 0.5090348 0.710394 0.657132 0.522486 0.5828994 0.574117 0.650938 0.612907 0.5634314 0.5009318 0.651654 0.009091 0.0095238 0.000000 0.007395 0.090131 0.000000 0.613354 0.524843 0.5347712 0.6716825 0.475152 3 0.567805 0.577208 -0.0189051 6 0.383020 0.352835 0.0301854 0.846284 7.4155e-01 insignificant 1 1.000000 insignificant 0.967881 6.9353e-01 insignificant 1 1.000000 insignificant -0.02730729 0.57473447 insignificant 1.00000 insignificant 0.568915 0.037641 0.5375969 6 0.446857 0.126882 0.3199747 1.6707e-39 9.9937e-01 hypermethylated 3.3415e-37 1.0000000 hypermethylated 2.0167e-11 0.99908593 hypermethylated 3.3611e-09 1.00000 hypermethylated 0.40141031 3.5429e-09 hypermethylated 4.4287e-07 hypermethylated 0.570585 0.542857 0.0355857 5 0.446942 0.523065 -0.0761228 1.3210e-01 0.24245323 insignificant 1.0000e+00 1.000000 insignificant 2.7473e-01 0.0719390 insignificant 1.0000e+00 1.0000 insignificant -0.0982139 1.3257e-02 weaklyHypometh 4.5713e-01 insignificant 0.577988 0.037641 0.5414697 6 0.411640 0.126882 0.28475844 7.7260e-35 0.98572356 hypermethylated 2.5753e-32 1.00000 hypermethylated 1.4670e-09 0.996716 hypermethylated 2.9341e-07 1 hypermethylated 0.428718 5.5155e-08 hypermethylated 9.1925e-06 hypermethylated 0.583333 0.542857 0.0535186 5 0.46897 0.523065 -0.0540966 3.3533e-02 0.4149161 weaklyHypermeth 5.1590e-01 1.00000 insignificant 2.3291e-01 0.2691488 insignificant 1.0000e+00 1 insignificant -0.0709066 1.1511e-01 insignificant 1.00000000 insignificant 0.035533 0.541547 -0.5110203 5 0.132139 0.470072 -0.3379334 9.9991e-01 1.7025e-19 hypomethylated 1.0000e+00 8.5124e-17 hypomethylated 9.9947e-01 1.3013e-07 hypomethylated 1.0000e+00 6.5063e-05 hypomethylated -0.499624 9.9640e-08 hypomethylated 3.3213e-05 hypomethylated chr11 118300362 118301362 110908 BCL9L ENSG00000186174 0.010526 77 5 0.000000 112 7 0.11353 166 7 0.000000 36 5 0.00000 87 7 0.015435 128 7 0.003861 189 5 0.0084034 113 7 0.100000 134 7 0.000000 127 5 0.00000 88 5 0.00000 145 7 0.000000 110 5 0.285714 56 5 0.000000 152 7 0.0083333 85 2 0.0040323 72 2 0.000000 20 0 0.018333 93 5 0.083333 137 7 0.083333 70 5 0.145833 24 2 0.125000 95 5 0.083333 54 2 0.00000 26 2 0.133333 133 7 0.000000 83 5 0.166667 33 2 0.00000 59 5 0.000000 145 7 0.226054 170 7 0.04250 136 5 0.0000000 78 7 0.128472 98 5 0.000000 1 0 0.000000 24 2 0.020370 72 7 0.0114286 86 5 0.125000 61 5 0.13427 77 4 0.181548 31 5 0.0079365 87 5 0.1250000 56 5 0.012704 0.000000 0.0074963 0.000000 0.000000 0.038081 0.0031066 0.0067613 0.0000000 0.0000000 0.00000 0.000000 0.000000 0.007328 0.000000 0.0182649 0.011123 0.000000 0.033429 0.028736 0.000000 0.0574713 0.000000 0.000000 0.000000 0.0076628 0.000000 0.000000 0.000000 0.0000000 0.0039635 0.013697 0.000000 0.0067050 NA 0.000000 0.031609 0.027586 0.000000 0.021599 0.0903120 0.0082102 0.000000 1 0.010343 0.019455 -0.0037357 5 0.038351 0.090006 -0.0516552 0.970491 2.6264e-01 insignificant 1 1.000000 insignificant 0.953155 5.9609e-01 insignificant 1 1.000000 insignificant -0.05126287 0.07161167 lowCoverage 1.00000 lowCoverage 0.010343 0.016713 -0.0067490 5 0.038351 0.039876 -0.0015250 9.9369e-01 6.9192e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9332e-01 0.93101163 insignificant 1.0000e+00 1.00000 insignificant 0.00586307 8.2426e-01 lowCoverage 1.0000e+00 lowCoverage 0.010353 0.032051 -0.0206866 5 0.042612 0.101405 -0.0587931 9.8981e-01 0.06675262 insignificant 1.0000e+00 1.000000 insignificant 9.9361e-01 0.2996680 insignificant 1.0000e+00 1.0000 insignificant -0.0821763 4.1999e-02 lowCoverage 8.3183e-01 lowCoverage 0.019455 0.016713 -0.0060228 5 0.090006 0.039876 0.05013022 8.8736e-01 0.73584354 insignificant 1.0000e+00 1.00000 insignificant 9.5117e-01 0.896352 insignificant 1.0000e+00 1 insignificant 0.057126 7.9529e-02 lowCoverage 8.4598e-01 lowCoverage 0.019512 0.032051 -0.0164201 5 0.10001 0.101405 -0.0013985 9.4683e-01 0.3300897 insignificant 1.0000e+00 1.00000 insignificant 9.8284e-01 0.4415625 insignificant 1.0000e+00 1 insignificant -0.0309134 4.1594e-01 lowCoverage 1.00000000 lowCoverage 0.016760 0.032051 -0.0086125 5 0.044307 0.101405 -0.0570987 9.9962e-01 9.3598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9990e-01 9.5669e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.088039 3.8994e-02 lowCoverage 6.4990e-01 lowCoverage chr11 118304846 118305846 110909 BCL9L ENSG00000186174 0.191787 111 4 0.180824 96 8 0.13257 197 7 0.090909 197 8 0.00000 176 9 0.119421 76 6 0.011740 225 8 0.0497835 149 7 0.184704 142 7 0.144345 105 5 0.09091 205 8 0.00000 130 6 0.018182 108 6 0.083333 35 4 0.018648 89 7 0.0032895 118 6 0.0652174 83 2 0.094017 207 10 0.124366 96 6 0.212054 48 3 0.014286 105 8 0.000000 1 0 0.146970 99 6 0.000000 75 8 0.17857 17 0 0.013963 118 8 0.138095 97 7 0.097222 78 8 0.10909 71 7 0.022917 127 8 0.229063 108 8 0.15056 73 10 0.0069444 132 7 0.000000 91 7 0.192450 113 7 NA 0 0 0.293770 150 8 0.0714286 126 11 0.023669 132 8 0.19722 124 10 0.059524 147 7 0.1607143 58 8 0.2000000 96 7 0.256410 0.043808 0.0058206 0.078671 0.000000 0.155678 0.0195403 0.0137363 0.0030525 0.0020032 0.00000 0.000000 0.034965 0.097487 0.051775 0.0025304 0.049736 0.064103 0.021592 0.085852 0.013736 NA 0.083042 0.000000 0.085849 0.0078080 0.048993 0.016026 0.038462 0.0092147 0.0062500 0.065247 0.018029 0.0000000 0.030476 NA 0.058471 0.000000 0.088757 0.083974 0.0416667 0.1682692 0.125000 0 0.022913 0.041537 -0.0135994 7 0.139775 0.211152 -0.0713765 0.820788 1.7358e-01 insignificant 1 1.000000 insignificant 0.956849 2.0371e-01 insignificant 1 1.000000 insignificant -0.00092328 0.97366935 insignificant 1.00000 insignificant 0.025312 0.039344 0.0014896 7 0.218856 0.200892 0.0179639 9.9318e-01 8.8389e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7290e-01 0.89197811 insignificant 1.0000e+00 1.00000 insignificant -0.02211367 7.2430e-01 insignificant 1.0000e+00 insignificant 0.021535 0.046763 -0.0503795 6 0.121194 0.154497 -0.0333029 9.3465e-01 0.01137918 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8247e-01 0.4575534 insignificant 1.0000e+00 1.0000 insignificant -0.0374209 3.8459e-01 insignificant 1.0000e+00 insignificant 0.039874 0.039474 0.0083907 7 0.209491 0.220981 -0.01149002 9.9521e-01 0.98463864 insignificant 1.0000e+00 1.00000 insignificant 9.3699e-01 0.993243 insignificant 1.0000e+00 1 insignificant -0.021190 7.4283e-01 insignificant 1.0000e+00 insignificant 0.037935 0.046679 -0.0594795 4 0.17666 0.146366 0.0302916 1.0000e+00 0.5376343 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9999e-01 0.9835266 lowCoverage 1.0000e+00 1 lowCoverage -0.0364976 4.2336e-01 insignificant 1.00000000 insignificant 0.026891 0.046931 -0.0716803 4 0.132247 0.163585 -0.0313385 9.9999e-01 4.6717e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.0000e+00 8.4116e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.015307 8.2747e-01 insignificant 1.0000e+00 insignificant chr11 118754586 118755586 110920 USP2 ENSG00000036672 0.447712 76 4 0.527104 206 5 0.48129 234 5 0.473523 90 4 0.19208 101 4 0.443802 127 5 0.385562 148 5 0.4261413 121 5 0.359762 100 4 0.260828 122 4 0.62721 154 5 0.74248 73 4 0.346875 113 4 0.125000 8 1 0.356277 98 5 0.3208333 43 3 0.4391813 95 3 0.606154 44 4 0.241299 98 5 0.267254 146 5 0.850000 16 3 0.603070 26 1 0.570515 119 5 0.410126 57 5 0.43589 108 2 0.402485 237 5 0.424701 53 4 0.504762 30 4 0.28889 169 5 0.429877 242 5 0.662520 270 5 0.67981 145 5 0.6096230 241 5 0.692695 78 5 0.807018 193 4 0.306667 67 2 0.782540 81 5 0.4831411 273 5 0.427249 89 4 0.49267 100 4 0.409083 73 5 0.4799933 54 4 0.2469556 60 2 0.475030 0.578051 0.5677711 0.526001 0.229689 0.428654 0.4426773 0.4556922 0.4388162 0.2814546 0.63599 0.694442 0.321325 NA 0.339766 0.4025822 0.382708 0.684435 0.264844 0.276397 0.885109 0.6147113 0.672458 0.485208 0.436745 0.4588655 0.449494 0.530852 0.308409 0.4726637 0.6764989 0.709022 0.706151 0.7304145 0.761552 0.359624 0.782081 0.508346 0.423661 0.534087 0.4320305 0.5062107 0.231966 0 0.452890 0.488451 -0.0343847 5 0.439317 0.482914 -0.0435961 0.908736 1.3186e-01 insignificant 1 1.000000 insignificant 0.993019 1.9814e-02 weaklyHypometh 1 1.000000 insignificant -0.11836864 0.04729957 lowCoverage 1.00000 lowCoverage 0.452890 0.640943 -0.2155908 5 0.439317 0.631878 -0.1925607 9.9989e-01 6.1486e-06 hypomethylated 1.0000e+00 0.0061486 hypomethylated 9.9997e-01 0.00074668 hypomethylated 1.0000e+00 0.74668 insignificant -0.21009569 4.3205e-02 lowCoverage 6.4485e-01 lowCoverage 0.452890 0.305851 0.0571069 4 0.439317 0.447435 -0.0081178 1.5123e-01 0.13459965 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.8830e-01 0.1638518 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.0076717 8.9306e-01 lowCoverage 1.0000e+00 lowCoverage 0.488451 0.640943 -0.1550053 5 0.482914 0.631878 -0.14896456 9.5062e-01 0.00076924 weaklyHypometh 1.0000e+00 0.76924 insignificant 8.9252e-01 0.093854 insignificant 1.0000e+00 1 insignificant -0.091727 3.3768e-01 lowCoverage 1.0000e+00 lowCoverage 0.488451 0.305851 0.1107555 4 0.48291 0.447435 0.0354783 3.7839e-02 0.0789892 lowCoverage 5.4840e-01 1.00000 lowCoverage 3.5531e-02 0.2816229 lowCoverage 6.4601e-01 1 lowCoverage 0.1106969 1.0401e-01 lowCoverage 1.00000000 lowCoverage 0.640943 0.305851 0.2552101 4 0.631878 0.447435 0.1844429 1.6798e-03 7.2619e-01 lowCoverage 2.0998e-01 1.0000e+00 lowCoverage 3.8404e-03 6.3383e-01 lowCoverage 5.4863e-01 1.0000e+00 lowCoverage 0.202424 5.5263e-02 lowCoverage 8.2567e-01 lowCoverage chr11 118873632 118874632 110922 THY1 ENSG00000154096 0.578400 77 5 0.589847 69 5 0.70890 68 5 0.807692 43 3 0.84167 26 3 0.763914 99 6 0.605208 48 2 0.6279403 81 5 0.788462 59 5 0.611232 77 5 0.67504 120 5 0.83556 37 3 0.702308 112 5 0.734127 30 1 0.811111 58 3 0.9000000 31 5 0.3452381 24 3 0.603905 71 5 0.846471 47 5 0.534650 103 5 0.600000 70 5 0.493407 44 3 0.700654 59 3 0.539189 63 5 0.94545 20 1 0.738960 84 5 0.645959 94 5 0.826984 47 3 0.87987 50 5 0.518613 93 5 0.679365 83 6 0.70921 152 5 0.8077991 53 3 0.621930 47 4 0.563636 34 2 0.091667 19 2 0.569048 74 5 0.5080723 111 5 0.416230 69 5 0.41703 86 5 0.653680 32 3 0.6492063 40 3 0.6600877 47 3 0.678055 0.796699 0.6886644 0.784588 0.801230 0.856720 0.5993852 0.7208615 0.7493380 0.8534089 0.78274 0.804372 0.619564 0.880601 0.737705 0.8616803 0.548419 0.682644 0.802917 0.692609 0.866803 0.4901819 0.656059 0.658283 0.939642 0.6569987 0.753128 0.860539 0.778848 0.6578389 0.7086521 0.737192 0.721009 0.4892148 0.508942 0.226808 0.750410 0.290523 0.501524 0.422531 0.7205663 0.6627635 0.609254 3 0.734949 0.728754 0.0029993 5 0.557336 0.566326 -0.0089893 0.845110 4.4736e-01 insignificant 1 1.000000 insignificant 0.872244 7.6678e-01 insignificant 1 1.000000 insignificant 0.00577780 0.91102480 lowCoverage 1.00000 lowCoverage 0.736264 0.541420 0.1900026 5 0.634171 0.507752 0.1264186 4.1786e-05 9.2969e-01 weaklyHypermeth 5.8854e-04 1.0000000 weaklyHypermeth 4.6810e-02 0.98137426 weaklyHypermeth 5.2595e-01 1.00000 insignificant 0.16855793 1.4736e-01 lowCoverage 1.0000e+00 lowCoverage 0.736264 0.503650 0.2281704 3 0.634171 0.512664 0.1215063 3.1967e-10 0.29559627 lowCoverage 2.1311e-08 1.000000 lowCoverage 8.5398e-03 0.3867537 lowCoverage 2.2473e-01 1.0000 lowCoverage 0.1363362 8.0500e-02 lowCoverage 1.0000e+00 lowCoverage 0.731308 0.541420 0.1841121 5 0.707907 0.507752 0.20015522 3.6692e-04 0.98436385 weaklyHypermeth 4.3167e-03 1.00000 weaklyHypermeth 1.1979e-01 0.997392 insignificant 1.0000e+00 1 insignificant 0.162780 1.6633e-01 lowCoverage 1.0000e+00 lowCoverage 0.731308 0.503650 0.2204920 3 0.70791 0.512664 0.1952429 1.6426e-09 0.4868520 lowCoverage 1.3689e-07 1.00000 lowCoverage 1.8396e-02 0.6696285 lowCoverage 4.2780e-01 1 lowCoverage 0.1305584 1.0349e-01 lowCoverage 1.00000000 lowCoverage 0.541420 0.503650 0.0172848 3 0.507752 0.512664 -0.0049123 4.7199e-01 9.4592e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2945e-01 6.4322e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.032222 7.8268e-01 lowCoverage 1.0000e+00 lowCoverage chr11 118878125 118879125 110925 THY1 ENSG00000154096 0.666789 212 6 0.417595 213 6 0.52238 156 6 0.490683 156 6 0.37754 111 6 0.501940 303 6 0.574299 150 6 0.3005809 199 6 0.508536 142 6 0.457548 118 6 0.68347 233 6 0.57686 76 6 0.108893 206 6 0.420833 23 2 0.428381 163 6 0.3379630 37 2 0.1062452 125 5 0.386998 264 6 0.117955 235 6 0.359117 236 6 0.696499 93 5 0.200174 172 6 0.508652 178 6 0.418793 88 6 0.52706 82 6 0.415324 289 6 0.526204 195 6 0.584733 76 6 0.59821 226 6 0.474721 341 6 0.219333 342 6 0.70458 266 6 0.5872731 243 6 0.225725 146 6 0.512476 145 4 0.500606 71 5 0.603409 114 7 0.3732866 330 6 0.116905 262 6 0.14916 245 6 0.083553 176 6 0.2263985 221 6 0.1421983 271 6 0.624984 0.364287 0.6011831 0.505919 0.394359 0.521287 0.5299270 0.3833574 0.3818878 0.5800539 0.74198 0.599385 0.111610 0.433003 0.420683 0.3458050 0.180270 0.392603 0.116431 0.361117 0.839258 0.1254366 0.523822 0.421698 0.541807 0.5222250 0.462072 0.804277 0.432299 0.4564701 0.2137440 0.690663 0.551790 0.2491031 0.571887 0.432265 0.726968 0.308140 0.106951 0.125502 0.0720507 0.2087431 0.136000 6 0.433889 0.467632 -0.0388171 6 0.380967 0.391310 -0.0103421 0.875786 1.6482e-01 insignificant 1 1.000000 insignificant 0.979730 4.0727e-02 weaklyHypometh 1 1.000000 insignificant -0.07229266 0.23386258 insignificant 1.00000 insignificant 0.433889 0.475691 -0.0276017 6 0.380967 0.459551 -0.0785837 6.4847e-01 4.1860e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.0686e-01 0.09860575 insignificant 1.0000e+00 1.00000 insignificant -0.04989887 4.8983e-01 insignificant 1.0000e+00 insignificant 0.435160 0.124255 0.2981606 6 0.444470 0.149977 0.2944923 5.3057e-11 1.00000000 hypermethylated 4.0813e-09 1.000000 hypermethylated 1.6089e-10 1.0000000 hypermethylated 3.2177e-08 1.0000 hypermethylated 0.2735873 3.6189e-06 hypermethylated 7.2377e-04 hypermethylated 0.467632 0.475691 -0.0066646 6 0.391310 0.459551 -0.06824164 1.3001e-01 0.22636012 insignificant 1.0000e+00 1.00000 insignificant 2.4453e-01 0.406397 insignificant 1.0000e+00 1 insignificant 0.022394 7.6961e-01 insignificant 1.0000e+00 insignificant 0.469046 0.124255 0.3326622 6 0.48089 0.149977 0.3309090 1.0101e-11 1.0000000 hypermethylated 1.4430e-09 1.00000 hypermethylated 4.4889e-10 1.0000000 hypermethylated 8.9777e-08 1 hypermethylated 0.3458800 8.0990e-06 hypermethylated 0.00202475 hypermethylated 0.478303 0.124255 0.3225591 6 0.460363 0.149977 0.3103858 1.6998e-07 1.0000e+00 hypermethylated 8.4992e-05 1.0000e+00 hypermethylated 1.4306e-05 9.9987e-01 hypermethylated 4.7685e-03 1.0000e+00 hypermethylated 0.323486 1.6919e-03 weaklyHypermeth 8.9045e-02 weaklyHypermeth chr11 118981238 118982238 110931 THY1 ENSG00000154096 0.923627 279 7 0.780064 132 6 0.85800 82 7 0.917605 147 6 0.85398 70 6 0.763696 361 6 0.844057 131 6 0.8635965 119 6 0.855769 77 6 0.856463 64 6 0.86650 212 6 0.97143 37 6 0.871060 108 7 0.944360 112 7 0.920411 131 7 1.0000000 3 0 NA 0 0 0.876031 251 6 0.813600 253 6 0.832843 334 6 0.606364 62 6 0.916667 14 1 0.808029 220 7 0.940461 144 7 0.94643 57 5 0.922860 195 6 0.842223 215 6 0.863636 31 2 0.76724 161 7 0.909511 236 7 0.884177 208 7 0.91286 455 7 0.8444066 160 7 0.886055 288 7 0.973333 312 6 0.900000 9 1 0.850796 90 7 0.7939027 317 7 0.767380 277 7 0.63810 206 6 0.843721 274 7 0.7468650 237 6 0.6458039 159 6 0.907132 0.732574 0.8342883 0.925557 0.846122 0.881549 0.8481868 0.8592732 0.8812576 0.9180650 0.84142 0.973016 0.850017 0.954826 0.894895 NA NA 0.852892 0.791638 0.763664 0.846392 0.8333859 0.933015 0.931184 0.880952 0.9208362 0.814824 0.902116 0.806807 0.8880933 0.8742386 0.923673 0.866759 0.8723886 0.963810 NA 0.834160 0.804208 0.732645 0.723904 0.8138971 0.7069916 0.604659 1 0.862853 0.889839 -0.0309624 6 0.869140 0.894975 -0.0258344 0.911417 1.6242e-02 weaklyHypometh 1 1.000000 insignificant 0.926859 1.4487e-02 weaklyHypometh 1 1.000000 insignificant 0.01433444 0.65155517 insignificant 1.00000 insignificant 0.862853 0.875850 -0.0218977 6 0.869140 0.874549 -0.0054089 6.8743e-01 1.8704e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 6.8111e-01 0.17968272 insignificant 1.0000e+00 1.00000 insignificant -0.00037614 9.8976e-01 insignificant 1.0000e+00 insignificant 0.862900 0.756288 0.1047807 6 0.885498 0.677712 0.2077862 3.9418e-06 0.99992881 weaklyHypermeth 1.7138e-04 1.000000 weaklyHypermeth 2.6225e-05 0.9999999 weaklyHypermeth 1.8732e-03 1.0000 weaklyHypermeth 0.1459999 1.6169e-02 weaklyHypermeth 4.6197e-01 insignificant 0.889839 0.875850 0.0144442 7 0.894975 0.874549 0.02042547 1.7044e-01 0.45155254 insignificant 1.0000e+00 1.00000 insignificant 1.6608e-01 0.607326 insignificant 1.0000e+00 1 insignificant -0.014711 6.9946e-01 insignificant 1.0000e+00 insignificant 0.889839 0.756944 0.1423116 7 0.89497 0.774528 0.1204471 1.9144e-10 0.9967455 weaklyHypermeth 2.3930e-08 1.00000 weaklyHypermeth 4.2593e-07 0.9999949 weaklyHypermeth 7.0988e-05 1 weaklyHypermeth 0.1316654 2.3825e-02 weaklyHypermeth 0.64393243 insignificant 0.875850 0.756944 0.1275353 7 0.874549 0.774528 0.1000216 2.0838e-04 9.8611e-01 weaklyHypermeth 2.9768e-02 1.0000e+00 weaklyHypermeth 1.9042e-04 9.9961e-01 weaklyHypermeth 4.7605e-02 1.0000e+00 weaklyHypermeth 0.146376 1.5553e-02 weaklyHypermeth 4.0930e-01 insignificant chr11 119573025 119574025 110984 ENSG00000176984 0.246385 45 2 0.281944 46 6 0.11111 41 6 0.017857 46 2 0.28393 30 2 0.219228 101 7 0.265278 34 2 0.3053247 82 7 0.255456 72 7 0.276488 48 3 0.24519 43 3 0.25744 47 3 0.180594 98 7 0.394444 32 1 0.256838 85 6 0.0729167 31 2 0.0744298 64 7 0.089796 66 6 0.121507 33 3 0.268121 100 7 0.188690 29 2 0.247531 66 6 0.251701 48 6 0.225794 47 5 0.25595 60 5 0.178274 76 7 0.307156 72 5 0.094231 59 5 0.54337 27 3 0.117141 70 7 0.277778 30 4 0.37480 66 7 0.0595238 63 6 0.300000 30 3 0.033333 11 1 0.166667 46 6 0.176536 68 4 0.1150794 51 6 0.178571 44 2 0.31713 51 2 0.179820 30 2 0.1477273 42 2 0.1517857 51 2 0.169611 0.159933 0.2104377 0.040584 0.219697 0.127364 0.2230640 0.1390931 0.0591856 0.2305195 0.27584 0.217352 0.047256 0.235495 0.148925 0.0378788 0.043290 0.121212 0.161339 0.118262 0.341609 0.0812290 0.318903 0.236171 0.112374 0.0342713 0.243121 0.136946 0.313356 0.0962162 0.1683502 0.227573 0.000000 0.1136364 0.037518 0.025253 0.071928 0.031746 0.208333 0.094837 0.2082009 0.0275482 0.023674 0 0.167832 0.181538 -0.0163093 6 0.302472 0.276980 0.0254927 0.806942 2.6385e-01 insignificant 1 1.000000 insignificant 0.823089 1.6329e-01 insignificant 1 1.000000 insignificant -0.04398733 0.29382431 lowCoverage 1.00000 lowCoverage 0.167832 0.115242 0.0462438 6 0.302472 0.174143 0.1283292 4.8873e-03 9.3263e-01 weaklyHypermeth 5.1445e-02 1.0000000 weaklyHypermeth 9.1748e-03 0.96549954 weaklyHypermeth 1.2233e-01 1.00000 insignificant 0.06935746 1.5903e-01 lowCoverage 1.0000e+00 lowCoverage 0.167832 0.100917 0.0687632 2 0.302472 0.298952 0.0035209 1.2356e-01 0.03350098 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.2480e-02 0.8071378 lowCoverage 8.0150e-01 1.0000 lowCoverage 0.0162072 6.8120e-01 lowCoverage 1.0000e+00 lowCoverage 0.181538 0.115242 0.0739706 6 0.276980 0.174143 0.10283650 8.7452e-03 0.97459661 weaklyHypermeth 8.7452e-02 1.00000 weaklyHypermeth 7.8782e-04 0.971749 weaklyHypermeth 1.7507e-02 1 weaklyHypermeth 0.113345 5.0029e-02 lowCoverage 6.2537e-01 lowCoverage 0.181538 0.100917 0.0730824 2 0.27698 0.298952 -0.0219719 3.7541e-01 0.2514056 lowCoverage 1.0000e+00 1.00000 lowCoverage 5.5249e-02 0.9388709 lowCoverage 9.0572e-01 1 lowCoverage 0.0601945 2.1855e-01 lowCoverage 1.00000000 lowCoverage 0.115242 0.100917 -0.0745380 2 0.174143 0.298952 -0.1248084 9.5224e-01 7.9432e-04 lowCoverage 1.0000e+00 1.6900e-02 lowCoverage 8.6099e-01 2.7153e-02 lowCoverage 1.0000e+00 4.7637e-01 lowCoverage -0.053150 3.1696e-01 lowCoverage 1.0000e+00 lowCoverage chr11 119888036 119889036 111003 ENSG00000204306 0.34994 671 14 0.2701425 592 18 0.4113753 675 18 0.36522 553 9 0.306859 605 15 0.431077 875 17 0.300990 867 19 0.2692924 560 18 0.4073424 747 18 0.309244 922 18 0.333719 826 18 0.358153 784 18 0.2733463 627 18 0.20447 446 12 0.30813 837 18 0.304464 747 18 0.370284 995 16 0.32337 799 14 0.302259 719 18 0.387231 722 17 0.34615 454 17 0.2477186 365 12 0.30879 549 19 0.267789 346 16 0.483623 210 10 0.31222 778 18 0.257374 858 16 0.307884 516 18 0.2690351 638 17 0.31490 792 18 0.266202 652 18 0.3872657 731 15 0.4394945 474 18 0.4199583 615 18 0.55181 250 12 0.36047 142 12 0.40615 443 19 0.34709 664 18 0.371600 950 18 0.363736 705 16 0.37549 748 11 0.4209038 747 14 0.37254 734 17 0.15977 0.1381988 0.2279943 0.13226 0.14204 0.202807 0.1321033 0.160999 0.1637445 0.203581 0.216981 0.177162 0.1175426 0.15552 0.1325488 0.108633 0.427213 0.1385568 0.15728 0.161065 0.27302 0.0908644 0.15454 0.138679 0.2408237 0.18415 0.124729 0.147160 0.1829973 0.12879 0.1255382 0.2109540 0.3161198 0.3927159 0.50328 0.20196 0.37065 0.144650 0.162638 0.1711416 0.18661 0.1874968 0.121474 8 0.225616 0.182109 0.03128550 18 0.314495 0.287147 0.02734771 0.037925 9.4537e-01 weaklyHypermeth 1 1.000000 insignificant 0.26986 8.8094e-01 insignificant 1 1.000000 insignificant 0.0152656 0.515403 insignificant 1 insignificant 0.225687 0.3471202 -0.095988 18 0.329655 0.3814356 -0.0517809 6.6514e-01 4.3437e-09 weaklyHypometh 1.0000e+00 1.0859e-06 weaklyHypometh 6.9042e-01 1.5911e-04 weaklyHypometh 1.0000e+00 0.038970 weaklyHypometh -0.091483 2.6239e-02 weaklyHypometh 4.1235e-01 insignificant 0.225806 0.1638331 0.01374818 16 0.36791 0.37968 -0.0117612 6.5974e-01 8.2162e-02 insignificant 1.0000e+00 1.000000 insignificant 7.6035e-01 0.10094461 insignificant 1.00000000 1.00000 insignificant -0.0515070 5.4444e-03 weaklyHypometh 0.277221 insignificant 0.181792 0.3469861 -0.122563 18 0.275298 0.3667650 -0.0914673 9.7755e-01 1.7771e-07 weaklyHypometh 1.0000e+00 5.9235e-05 weaklyHypometh 9.7938e-01 0.00032105 weaklyHypometh 1.0000e+00 0.16760 insignificant -0.106748 1.4424e-02 weaklyHypometh 2.6711e-01 insignificant 0.181818 0.163749 -0.0108018 16 0.29707 0.362418 -0.0653492 9.1496e-01 3.9746e-03 weaklyHypometh 1.0000e+00 0.567798 insignificant 9.6992e-01 0.0480829 weaklyHypometh 1.0000e+00 1 insignificant -0.0667727 8.0952e-03 weaklyHypometh 0.4348933 insignificant 0.3474215 0.1637487 0.1200151 16 0.3955707 0.3624182 0.0331525 2.0048e-03 6.3885e-01 weaklyHypermeth 0.26350819 1.0000e+00 insignificant 0.0417256 7.1103e-01 weaklyHypermeth 1.00000 1.0000000 insignificant 0.039976 0.25158665 insignificant 1.00000 insignificant chr11 119888466 119889466 111004 ENSG00000204306 0.88531 404 14 0.7971529 380 14 0.8944874 380 14 0.87917 256 8 0.861643 226 9 0.845316 404 14 0.850837 373 14 0.7198853 288 12 0.9154284 303 14 0.919693 259 14 0.884628 500 14 0.828820 271 14 0.8039354 330 14 1.00000 1 0 0.85106 270 14 0.833036 160 9 0.806014 166 14 0.85285 303 12 0.854795 307 14 0.888727 381 14 0.83815 182 13 0.7028770 95 6 0.84219 305 14 0.816337 152 12 0.859059 104 6 0.88659 416 14 0.816714 211 12 0.883455 166 14 0.8750495 282 12 0.88248 430 14 0.840979 362 14 0.8933159 443 14 0.7831832 286 14 0.8326976 324 14 0.93434 199 6 0.73974 138 12 0.81522 201 12 0.77327 364 14 0.928243 432 14 0.924978 367 14 0.92306 296 9 0.8784125 365 14 0.85092 409 12 0.87876 0.8172466 0.8743347 0.89224 0.84068 0.837241 0.8422707 0.764718 0.9078489 0.910392 0.875190 0.794841 0.8256510 NA 0.8650035 0.874221 0.780259 0.8523868 0.87429 0.885530 0.80198 0.7925867 0.88401 0.830837 0.8865842 0.88799 0.852915 0.912285 0.8851110 0.88322 0.8859159 0.8770942 0.6908727 0.8304030 0.86680 0.78038 0.84548 0.807767 0.914803 0.9330131 0.91044 0.9105046 0.875890 4 0.855082 0.876429 -0.02030371 14 0.852328 0.863445 -0.01111647 0.973730 4.7560e-02 weaklyHypometh 1 1.000000 insignificant 0.98212 7.5066e-02 insignificant 1 1.000000 insignificant 0.0138722 0.488345 insignificant 1 insignificant 0.855082 0.7969577 0.053590 14 0.852328 0.8170866 0.0352417 4.3369e-05 1.4151e-02 weaklyHypermeth 7.6087e-04 1.0000e+00 weaklyHypermeth 1.6090e-01 2.5365e-02 inconclusive 1.0000e+00 1.000000 insignificant 0.045563 1.7673e-01 insignificant 1.0000e+00 insignificant 0.855082 0.9133226 -0.05421438 14 0.85233 0.90736 -0.0550291 1.0000e+00 4.7404e-05 weaklyHypometh 1.0000e+00 0.032286 weaklyHypometh 9.9999e-01 0.00022522 weaklyHypometh 1.00000000 0.22522 insignificant -0.0424848 5.9891e-02 insignificant 1.000000 insignificant 0.876429 0.7969577 0.073393 14 0.863445 0.8170866 0.0463581 1.9645e-03 3.1184e-01 weaklyHypermeth 2.6911e-02 1.0000e+00 weaklyHypermeth 2.4303e-01 0.35413990 insignificant 1.0000e+00 1.00000 insignificant 0.031691 3.4347e-01 insignificant 1.0000e+00 insignificant 0.876429 0.913323 -0.0374725 14 0.86344 0.907357 -0.0439126 9.9992e-01 3.8460e-03 weaklyHypometh 1.0000e+00 0.567798 insignificant 9.9989e-01 0.0201252 weaklyHypometh 1.0000e+00 1 insignificant -0.0563569 2.3844e-02 weaklyHypometh 0.7012881 insignificant 0.7969577 0.9133226 -0.1085533 14 0.8170866 0.9073573 -0.0902707 9.8486e-01 1.7887e-03 weaklyHypometh 1.00000000 3.5072e-02 weaklyHypometh 0.8985612 2.5141e-02 weaklyHypometh 1.00000 0.4929551 insignificant -0.088048 0.02501094 weaklyHypometh 0.55137 insignificant chr11 119889005 119890005 111005 ENSG00000204306 0.86267 432 13 0.6803947 451 13 0.7951805 401 13 0.88348 418 13 0.836136 253 11 0.836962 532 13 0.801418 346 13 0.7592239 414 11 0.8489401 369 13 0.901316 349 13 0.800248 531 13 0.772199 277 13 0.6444447 434 13 0.81383 109 5 0.83349 294 12 0.822654 127 8 0.844853 365 11 0.78509 409 11 0.846390 389 13 0.826651 463 13 0.78101 220 13 0.7146379 190 11 0.87364 353 13 0.886723 244 13 0.741941 252 11 0.86499 551 13 0.843270 271 13 0.719029 196 12 0.8073753 406 12 0.83874 604 13 0.850725 537 13 0.8896497 449 13 0.6413054 435 13 0.6623539 315 13 0.82418 290 8 0.55547 152 9 0.68607 267 11 0.63559 545 13 0.853568 511 13 0.808810 420 13 0.81284 429 11 0.7823459 446 13 0.82317 543 11 0.81198 0.7354214 0.7321101 0.82613 0.75499 0.817869 0.7980694 0.726142 0.8024669 0.840138 0.833948 0.701669 0.6372925 0.79241 0.7821467 0.797278 0.837865 0.7241839 0.79493 0.764391 0.76636 0.6472387 0.84777 0.857858 0.7956306 0.79886 0.789011 0.826397 0.7861050 0.76520 0.7778666 0.8745409 0.5069915 0.5210603 0.84271 0.48860 0.68793 0.562656 0.757880 0.7314739 0.72785 0.6870649 0.745817 8 0.790239 0.811285 -0.01542284 13 0.835332 0.812373 0.02295880 0.992986 2.9911e-02 weaklyHypometh 1 1.000000 insignificant 0.99772 4.2492e-02 weaklyHypometh 1 1.000000 insignificant -0.0078654 0.736065 insignificant 1 insignificant 0.789996 0.6092814 0.180127 13 0.787713 0.6385143 0.1491983 1.6397e-14 2.2483e-01 weaklyHypermeth 6.5587e-13 1.0000e+00 weaklyHypermeth 1.8861e-05 2.8966e-01 weaklyHypermeth 7.8588e-04 1.000000 weaklyHypermeth 0.142284 8.9145e-03 weaklyHypermeth 1.9810e-01 insignificant 0.790211 0.7640545 0.05312036 13 0.83533 0.82785 0.0074782 3.5564e-01 1.7313e-02 inconclusive 1.0000e+00 1.000000 insignificant 1.8752e-01 0.05190299 insignificant 1.00000000 1.00000 insignificant -0.0063697 7.2745e-01 insignificant 1.000000 insignificant 0.811914 0.6095856 0.197345 13 0.841896 0.6876308 0.1542652 5.6463e-11 9.1109e-01 weaklyHypermeth 2.0894e-09 1.0000e+00 weaklyHypermeth 4.5182e-05 0.82030802 weaklyHypermeth 1.8073e-03 1.00000 weaklyHypermeth 0.150149 6.4443e-03 weaklyHypermeth 1.6111e-01 insignificant 0.811533 0.764055 0.0562346 13 0.78176 0.827853 -0.0460929 1.2216e-01 4.1654e-01 insignificant 1.0000e+00 1.000000 insignificant 2.4968e-01 0.4139153 insignificant 1.0000e+00 1 insignificant 0.0014957 9.4614e-01 insignificant 1.0000000 insignificant 0.6095856 0.7639540 -0.1466549 13 0.6876308 0.8146114 -0.1269807 9.7156e-01 2.7140e-04 weaklyHypometh 1.00000000 7.3350e-03 weaklyHypometh 0.9247181 2.6609e-03 weaklyHypometh 1.00000 0.1064374 insignificant -0.148653 0.00783168 weaklyHypometh 0.25263 insignificant chr11 122415428 122416428 111234 ENSG00000213184 0.80974 312 8 0.6843777 285 8 0.6930455 237 8 0.71384 101 7 0.799719 115 8 0.843670 224 8 0.773915 244 8 0.6696097 200 8 0.6728207 188 8 0.841868 167 8 0.770552 295 8 0.848916 150 8 0.6556064 293 8 NA 0 0 0.81620 229 8 0.698362 159 8 0.765412 162 8 0.69081 135 7 0.715630 193 8 0.754761 253 8 0.76893 123 8 0.4712529 93 7 0.69517 178 8 0.824338 86 7 0.824058 49 4 0.80203 324 8 0.763194 97 7 0.725000 99 8 0.7185584 216 7 0.81479 388 8 0.741147 323 8 0.7599476 364 8 0.2593855 285 8 0.2429374 197 8 0.22222 163 6 0.55530 86 7 0.40746 131 8 0.56291 407 8 0.707904 211 7 0.640282 302 8 0.67608 180 7 0.7105677 273 8 0.56949 185 7 0.80640 0.6713967 0.6751246 0.75761 0.76819 0.834075 0.7593083 0.696876 0.6859140 0.818398 0.748573 0.842331 0.6508801 NA 0.7993868 0.656601 0.703387 0.6472440 0.75436 0.752706 0.78534 0.5304786 0.66687 0.813344 0.7733610 0.78986 0.747055 0.747814 0.7368737 0.76373 0.7092736 0.7569193 0.2566706 0.2018008 0.25323 0.49740 0.39322 0.519873 0.670944 0.6253395 0.65954 0.6835623 0.511726 7 0.736428 0.756838 -0.00982253 8 0.755122 0.758259 -0.00313741 0.282700 1.2361e-01 insignificant 1 1.000000 insignificant 0.41621 1.8933e-01 insignificant 1 1.000000 insignificant 0.0059932 0.850542 insignificant 1 insignificant 0.736428 0.3443656 0.392721 8 0.755122 0.3909019 0.3642197 3.3220e-28 1.0000e+00 hypermethylated 1.6610e-25 1.0000e+00 hypermethylated 3.0403e-14 1.0000e+00 hypermethylated 3.0403e-11 1.000000 hypermethylated 0.373326 1.6701e-03 weaklyHypermeth 6.9587e-02 weaklyHypermeth 0.736428 0.6125109 0.11646463 7 0.75512 0.66157 0.0935470 4.9538e-07 9.9348e-01 weaklyHypermeth 3.8106e-05 1.000000 weaklyHypermeth 1.3188e-04 0.96017330 weaklyHypermeth 0.01318804 1.00000 weaklyHypermeth 0.0874973 2.3316e-02 weaklyHypermeth 0.685762 insignificant 0.756838 0.3443656 0.402233 8 0.758259 0.3909019 0.3673571 3.0587e-20 1.0000e+00 hypermethylated 2.7806e-18 1.0000e+00 hypermethylated 1.1529e-10 0.99994785 hypermethylated 5.7645e-08 1.00000 hypermethylated 0.367333 1.2074e-03 weaklyHypermeth 5.2494e-02 weaklyHypermeth 0.756838 0.612511 0.1277311 7 0.75826 0.661575 0.0966844 2.1584e-09 8.1265e-01 weaklyHypermeth 3.0834e-07 1.000000 weaklyHypermeth 6.4208e-05 0.7871980 weaklyHypermeth 1.0701e-02 1 weaklyHypermeth 0.0815041 5.2587e-02 insignificant 1.0000000 insignificant 0.3443656 0.6125109 -0.2681398 7 0.3909019 0.6615746 -0.2706727 1.0000e+00 5.8621e-08 hypomethylated 1.00000000 3.3991e-06 hypomethylated 1.0000000 6.6945e-06 hypomethylated 1.00000 0.0011158 hypomethylated -0.285829 0.00502460 weaklyHypometh 0.19325 insignificant chr11 122885346 122886346 111242 ENSG00000200496 0.82933 100 5 0.4992640 200 7 0.6194752 214 7 0.67361 111 3 0.704187 177 7 0.709168 201 7 0.573022 179 7 0.5710587 187 6 0.6977471 198 7 0.682869 229 7 0.724085 218 7 0.578354 159 7 0.5338359 262 7 0.47944 68 3 0.60142 244 7 0.513993 142 7 0.693462 339 5 0.61428 146 5 0.650682 139 6 0.719007 198 7 0.59074 77 8 0.3632703 88 4 0.68633 159 7 0.671763 115 7 0.628454 57 3 0.75077 215 7 0.575092 164 7 0.592638 86 7 0.7939311 182 6 0.69838 292 7 0.633092 227 7 0.7349877 180 7 0.7260335 194 7 0.4694955 118 7 0.33866 260 6 0.66667 18 2 0.53862 132 8 0.80561 230 7 0.694872 90 4 0.702246 148 7 0.72583 122 3 0.5830870 133 5 0.72199 121 6 0.69148 0.5809033 0.6209109 0.65041 0.57768 0.687526 0.4625759 0.619506 0.6267223 0.610115 0.652408 0.560646 0.5656453 0.60229 0.6156156 0.513906 0.694195 0.5388002 0.64695 0.627177 0.55523 0.4023456 0.74330 0.537241 0.5924574 0.62032 0.508690 0.472504 0.7566247 0.65415 0.6731759 0.5910874 0.7712215 0.5305119 0.16994 0.54354 0.56621 0.733848 0.553130 0.5485471 0.59058 0.5499793 0.640707 2 0.642953 0.609451 0.00251563 7 0.636154 0.635505 0.00064904 0.669957 3.6465e-01 insignificant 1 1.000000 insignificant 0.90804 4.4222e-01 insignificant 1 1.000000 insignificant -0.0098722 0.797855 insignificant 1 insignificant 0.642953 0.7273684 -0.058651 7 0.636154 0.6103631 0.0257905 3.3817e-01 4.2910e-04 weaklyHypometh 1.0000e+00 5.3637e-02 weaklyHypometh 6.0872e-01 9.1191e-02 insignificant 1.0000e+00 1.000000 insignificant 0.042568 5.8567e-01 insignificant 1.0000e+00 insignificant 0.643185 0.5667752 0.04787119 5 0.65317 0.72765 -0.0744783 2.4225e-01 2.8169e-02 inconclusive 1.0000e+00 1.000000 insignificant 2.6820e-01 0.08381346 insignificant 1.00000000 1.00000 insignificant -0.0521906 1.4822e-01 insignificant 1.000000 insignificant 0.609121 0.7266036 -0.046420 7 0.571954 0.5493268 0.0226273 5.6990e-01 1.9621e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.2283e-01 0.13739786 insignificant 1.0000e+00 1.00000 insignificant 0.052440 5.2237e-01 insignificant 1.0000e+00 insignificant 0.609101 0.566775 0.0275096 5 0.63406 0.727651 -0.0935908 6.1992e-01 7.6304e-02 insignificant 1.0000e+00 1.000000 insignificant 5.0356e-01 0.1702798 insignificant 1.0000e+00 1 insignificant -0.0423184 3.2638e-01 insignificant 1.0000000 insignificant 0.7298729 0.5667752 0.0611429 5 0.6449919 0.7276511 -0.0826593 6.3921e-02 3.9791e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.6492630 5.8602e-01 insignificant 1.00000 1.0000000 insignificant -0.094758 0.25502463 insignificant 1.00000 insignificant chr11 124093276 124094276 111284 SIAE ENSG00000110013 0.00000 540 10 0.0046296 228 9 0.0078976 259 9 0.00000 296 10 0.026479 129 9 0.012861 392 9 0.003268 399 9 0.0096545 248 9 0.0061728 287 9 0.000000 227 9 0.015564 380 9 0.015092 406 9 0.0037037 221 9 NA 0 0 0.00271 298 9 0.015392 468 9 0.057549 324 9 0.16870 268 9 0.015235 257 9 0.018889 445 9 0.00000 95 7 0.0055556 179 9 0.27618 265 9 0.027690 139 9 0.006536 133 9 0.00000 391 9 0.027066 139 9 0.059921 83 9 0.0079365 198 9 0.00000 368 9 0.002584 331 9 0.0022176 484 9 0.0074074 140 9 0.0038314 205 9 0.00000 196 9 0.00000 234 9 0.00000 95 8 0.00000 284 9 0.010045 629 10 0.038855 609 9 0.00000 457 9 0.0050295 582 9 0.07242 506 10 0.00000 0.0047141 0.0083727 0.00000 0.02475 0.014245 0.0038106 0.010003 0.0051703 0.000000 0.015746 0.014878 0.0037105 NA 0.0027150 0.015999 0.057361 0.0031600 0.01611 0.019542 0.00000 0.0046533 0.06497 0.026973 0.0065479 0.00000 0.025271 0.062024 0.0078206 0.00000 0.0028009 0.0029352 0.0068127 0.0044677 0.00000 0.00000 0.00000 0.000000 0.010838 0.0048584 0.00000 0.0058514 0.017553 9 0.010214 0.011786 -0.00078279 9 0.011162 0.011427 -0.00026458 0.899518 6.2388e-01 insignificant 1 1.000000 insignificant 0.80653 8.3360e-01 insignificant 1 1.000000 insignificant -0.0144407 0.559986 insignificant 1 insignificant 0.010258 0.0017331 0.010676 9 0.012402 0.0017119 0.0106905 7.5664e-03 9.9305e-01 weaklyHypermeth 9.3413e-02 1.0000e+00 weaklyHypermeth 6.4071e-03 9.9896e-01 weaklyHypermeth 1.1241e-01 1.000000 insignificant 0.018327 5.3220e-02 insignificant 7.1919e-01 insignificant 0.010377 0.0050615 0.00466220 9 0.10106 0.09698 0.0040773 4.7864e-01 9.9201e-01 insignificant 1.0000e+00 1.000000 insignificant 7.3968e-01 0.95782366 insignificant 1.00000000 1.00000 insignificant -0.0050703 7.6221e-01 insignificant 1.000000 insignificant 0.011794 0.0017331 0.010734 9 0.012696 0.0017119 0.0109845 3.3527e-02 9.9890e-01 weaklyHypermeth 3.7253e-01 1.0000e+00 insignificant 1.8098e-02 0.99928724 weaklyHypermeth 2.7421e-01 1.00000 insignificant 0.032767 1.7455e-01 insignificant 1.0000e+00 insignificant 0.012139 0.005056 0.0058570 9 0.10130 0.028797 0.0724996 3.4101e-01 9.9562e-01 insignificant 1.0000e+00 1.000000 insignificant 7.8630e-01 0.9404253 insignificant 1.0000e+00 1 insignificant 0.0093704 7.2680e-01 insignificant 1.0000000 insignificant 0.0017331 0.0047393 -0.0057805 9 0.0017119 0.0074191 -0.0057072 9.9806e-01 5.5853e-02 insignificant 1.00000000 6.9816e-01 insignificant 0.9999860 6.3836e-02 insignificant 1.00000 0.9527793 insignificant -0.023397 0.16015777 insignificant 1.00000 insignificant chr11 124586679 124587679 111322 PKNOX2 ENSG00000165495 0.61313 180 3 0.4228995 153 7 0.4749249 107 6 0.46986 170 3 0.614418 83 6 0.497381 212 6 0.518604 100 3 0.5095238 98 6 0.3055556 33 4 0.487013 39 2 0.440381 207 7 0.639815 42 4 0.5444178 53 4 0.56633 51 5 0.54145 79 5 0.472222 27 2 0.666667 48 2 0.62370 286 2 0.536007 164 7 0.593073 149 4 0.48132 65 4 0.5000000 2 0 0.45782 84 3 0.485714 30 4 0.637382 245 3 0.55866 165 6 0.547619 31 3 0.540100 53 5 0.5331418 181 6 0.48173 201 7 0.490861 210 7 0.4929100 118 5 0.4261737 148 7 0.3858025 66 3 0.36674 154 5 0.75643 141 3 0.46667 127 7 0.41322 205 7 0.445394 149 3 0.434317 158 5 0.62131 154 3 0.5416667 11 0 0.46448 136 3 0.80357 0.7020108 0.7642428 0.76204 0.83844 0.753115 0.7768330 0.811224 0.7201942 0.792672 0.712778 0.754819 0.7892729 0.79410 0.7714504 0.837253 0.888274 0.8450060 0.76438 0.855197 0.72057 0.5189891 0.78198 0.816327 0.7753487 0.85048 0.855442 0.814268 0.7821833 0.78417 0.7912912 0.7881393 0.7520167 0.7197711 0.78365 0.80724 0.73447 0.642993 0.781886 0.7488839 0.75093 0.8275506 0.775287 2 0.775877 0.774007 -0.01101604 5 0.507907 0.505885 0.00202168 0.903829 3.2796e-01 insignificant 1 1.000000 insignificant 0.85144 3.9891e-01 insignificant 1 1.000000 insignificant 0.0095977 0.691923 lowCoverage 1 lowCoverage 0.775877 0.7086801 0.067441 6 0.507907 0.4481013 0.0598056 1.0050e-02 8.9369e-01 weaklyHypermeth 1.2256e-01 1.0000e+00 insignificant 3.4177e-02 9.7982e-01 weaklyHypermeth 4.8824e-01 1.000000 insignificant 0.057696 3.8902e-01 lowCoverage 1.0000e+00 lowCoverage 0.775877 0.8667763 0.00034298 3 0.50791 0.48696 0.0209486 3.5597e-01 6.8934e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.0542e-01 0.81718709 lowCoverage 1.00000000 1.00000 lowCoverage 0.0254349 5.4913e-01 lowCoverage 1.000000 lowCoverage 0.774007 0.7086801 0.074205 5 0.505885 0.4481013 0.0577839 1.2248e-02 9.1158e-01 weaklyHypermeth 1.4936e-01 1.0000e+00 insignificant 1.0063e-02 0.96227693 weaklyHypermeth 1.6231e-01 1.00000 insignificant 0.048098 4.6130e-01 lowCoverage 1.0000e+00 lowCoverage 0.774007 0.866776 0.0146950 3 0.50589 0.486958 0.0189269 3.7555e-01 9.0619e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.9774e-01 0.9880558 lowCoverage 1.0000e+00 1 lowCoverage 0.0158372 6.9375e-01 lowCoverage 1.0000000 lowCoverage 0.7086801 0.8667763 -0.0699332 3 0.4481013 0.4869583 -0.0388570 6.1963e-01 1.2828e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.4218879 8.5364e-02 lowCoverage 1.00000 1.0000000 lowCoverage -0.032261 0.65223022 lowCoverage 1.00000 lowCoverage chr11 124717250 124718250 111350 ENSG00000222844 0.67599 191 4 0.4939123 104 6 0.8054701 61 4 0.77137 208 6 0.797196 48 5 0.832622 221 7 0.634524 32 3 0.7115660 119 5 0.5194444 46 4 0.570991 60 4 0.732891 159 7 0.242951 33 2 0.5367308 120 5 0.84722 29 4 0.69478 65 4 0.424074 47 2 0.322965 44 3 0.77925 219 5 0.841270 80 4 0.707084 158 5 0.62829 53 3 0.8275835 64 4 0.59867 101 4 0.782639 44 4 0.907407 62 4 0.68254 178 5 0.581335 118 6 0.753157 31 2 0.7345098 88 4 0.74368 139 6 0.749551 139 5 0.8448624 204 5 0.7287473 122 7 0.7679119 132 5 0.98611 96 5 0.79762 32 2 0.77551 78 5 0.93047 200 5 0.738961 160 4 0.582676 181 4 0.81825 146 4 0.6413294 85 4 0.74797 198 6 0.81331 0.6724156 0.7239947 0.79171 0.72439 0.783826 0.4885333 0.711504 0.5408000 0.647966 0.739436 0.299789 0.6850379 0.69396 0.5985714 0.419852 0.361853 0.7871036 0.77155 0.731364 0.74875 0.6738312 0.71178 0.735644 0.8062222 0.76172 0.686658 0.732485 0.6847686 0.77199 0.8424727 0.7215390 0.8440519 0.7987213 0.94562 0.79906 0.83717 0.889412 0.603083 0.6943783 0.69875 0.5134123 0.712104 2 0.710926 0.758819 -0.05603936 5 0.700283 0.749128 -0.04884435 0.670741 6.2392e-02 insignificant 1 1.000000 insignificant 0.94670 5.1317e-02 insignificant 1 1.000000 insignificant -0.0890701 0.077554 lowCoverage 1 lowCoverage 0.710372 0.8560606 -0.148337 5 0.659511 0.7556748 -0.0961636 9.9860e-01 1.5685e-05 weaklyHypometh 1.0000e+00 3.1369e-03 weaklyHypometh 9.9970e-01 1.7252e-05 weaklyHypometh 1.0000e+00 0.012130 weaklyHypometh -0.183946 6.0542e-03 lowCoverage 1.5524e-01 lowCoverage 0.710926 0.6714286 0.03439612 4 0.70028 0.70690 -0.0066166 9.5597e-03 3.4033e-01 lowCoverage 2.4326e-01 1.000000 lowCoverage 4.1329e-01 0.18860209 lowCoverage 1.00000000 1.00000 lowCoverage -0.0587228 3.2554e-01 lowCoverage 1.000000 lowCoverage 0.758819 0.8573596 -0.100136 5 0.749128 0.8501341 -0.1010063 9.6547e-01 9.2913e-06 weaklyHypometh 1.0000e+00 1.8583e-03 weaklyHypometh 9.7571e-01 0.00100343 weaklyHypometh 1.0000e+00 0.20069 insignificant -0.094875 9.1926e-02 lowCoverage 1.0000e+00 lowCoverage 0.758819 0.671429 0.0987275 4 0.74913 0.706900 0.0422278 1.8566e-02 7.4215e-01 lowCoverage 3.7890e-01 1.000000 lowCoverage 9.1919e-02 0.6849495 lowCoverage 1.0000e+00 1 lowCoverage 0.0303473 5.6603e-01 lowCoverage 1.0000000 lowCoverage 0.8573596 0.6714286 0.2027046 4 0.8501341 0.7069000 0.1432341 1.3712e-07 9.7653e-01 lowCoverage 0.00003428 1.0000e+00 lowCoverage 0.0008922 8.5102e-01 lowCoverage 0.26713 1.0000000 lowCoverage 0.125223 0.06357487 lowCoverage 0.96072 lowCoverage chr11 124753307 124754307 111357 ENSG00000222844 0.92134 179 7 0.7408817 71 5 0.8809524 48 6 0.97194 112 7 0.928571 31 3 0.931308 176 7 0.952381 48 3 0.8615492 63 6 0.8190476 34 3 0.915066 59 5 0.916550 179 7 0.852041 27 1 0.8664966 52 5 1.00000 7 1 0.96173 54 6 0.805556 22 1 0.958333 32 2 0.93535 102 6 0.915584 39 3 0.937059 141 6 0.92937 48 4 0.9458333 42 5 0.90476 49 5 0.871655 44 4 0.955476 74 6 0.88254 84 5 0.909524 42 5 1.000000 24 2 0.9666667 29 5 0.90602 124 6 0.887500 90 7 0.9376747 210 7 0.8340548 61 5 0.7574842 84 7 1.00000 18 2 0.86348 76 6 0.79429 59 5 0.87435 86 7 0.968995 195 7 0.954682 182 7 0.93464 147 7 0.9567628 123 5 0.92533 167 7 0.90908 0.8180152 0.9183007 0.96094 0.97059 0.932590 0.9760349 0.877313 0.8169935 0.922008 0.937128 0.842437 0.8969421 0.93056 0.9597339 0.835123 0.944322 0.9425618 0.93405 0.927624 0.92429 0.9494177 0.93464 0.880859 0.9610784 0.89153 0.949673 1.000000 0.9661191 0.92807 0.9725490 0.9458420 0.8261042 0.8066068 0.88370 0.87539 0.86667 0.903794 0.966754 0.9552113 0.98142 0.9472262 0.952641 1 0.911247 0.926744 -0.01222917 7 0.920410 0.885598 0.03481196 0.776682 1.8348e-01 insignificant 1 1.000000 insignificant 0.93990 3.0922e-01 insignificant 1 1.000000 insignificant -0.0211634 0.247812 lowCoverage 1 lowCoverage 0.911247 0.8125000 0.093847 7 0.920410 0.8316399 0.0887705 6.9399e-05 9.9476e-01 weaklyHypermeth 1.1763e-03 1.0000e+00 weaklyHypermeth 7.3724e-02 9.6641e-01 insignificant 9.5746e-01 1.000000 insignificant 0.049644 2.2302e-01 lowCoverage 1.0000e+00 lowCoverage 0.911247 0.9496314 -0.03999578 7 0.92041 0.93011 -0.0096994 9.4091e-01 4.5021e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.4970e-01 0.27423465 insignificant 1.00000000 1.00000 insignificant -0.0444956 1.1907e-02 lowCoverage 0.405441 lowCoverage 0.926744 0.8125000 0.103903 7 0.885598 0.8316399 0.0539585 4.0386e-05 9.8862e-01 weaklyHypermeth 6.9632e-04 1.0000e+00 weaklyHypermeth 3.3152e-02 0.96040581 weaklyHypermeth 4.6044e-01 1.00000 insignificant 0.070807 9.5794e-02 insignificant 1.0000e+00 insignificant 0.926744 0.949631 -0.0221577 7 0.88560 0.930110 -0.0445114 9.7844e-01 1.2234e-01 insignificant 1.0000e+00 1.000000 insignificant 8.3328e-01 0.6273029 insignificant 1.0000e+00 1 insignificant -0.0233323 1.0629e-01 insignificant 1.0000000 insignificant 0.8125000 0.9496314 -0.1284330 7 0.8316399 0.9301098 -0.0984699 9.9454e-01 3.0234e-05 weaklyHypometh 1.00000000 1.0426e-03 weaklyHypometh 0.9918830 7.2690e-02 insignificant 1.00000 1.0000000 insignificant -0.094140 0.03952433 weaklyHypometh 0.70213 insignificant chr11 124762991 124763991 111358 ENSG00000222844 0.95716 420 5 0.9229212 378 5 0.8497308 102 5 0.94615 479 5 0.931818 81 4 0.952275 512 5 0.876261 114 4 0.9109044 157 5 0.8468806 71 5 0.954545 87 5 0.952299 234 5 0.760000 27 5 0.9299539 108 5 0.94310 89 5 0.92428 117 5 0.669658 52 4 1.000000 1 0 0.85412 822 5 0.949614 257 5 0.944014 250 5 0.92000 59 5 0.8918519 60 5 0.95393 217 5 0.930814 90 5 0.977778 75 5 0.95495 372 5 0.810390 78 5 0.811111 35 4 0.9645634 300 5 0.95202 510 5 0.953807 504 5 0.9641461 425 5 0.8069330 297 5 0.7239024 141 5 1.00000 15 1 0.93333 14 0 0.86671 217 5 0.71807 386 5 0.894265 455 5 0.951259 357 5 0.76727 625 5 0.9368567 497 5 0.89796 382 5 0.94648 0.9211702 0.8396049 0.94385 0.95238 0.950272 0.9189322 0.901506 0.8701844 0.970006 0.954557 0.809977 0.9307815 0.95333 0.9239565 0.661899 NA 0.9249548 0.94390 0.939406 0.91156 0.8880826 0.94869 0.922866 0.9758125 0.95801 0.801573 0.848073 0.9609045 0.94920 0.9564781 0.9624399 0.7870337 0.7050606 0.98808 0.96372 0.85337 0.702017 0.887430 0.9459715 0.91959 0.9291249 0.873032 4 0.932767 0.951927 -0.01884877 5 0.915101 0.956836 -0.04173479 0.994883 5.4354e-02 insignificant 1 1.000000 insignificant 0.98054 3.0498e-01 insignificant 1 1.000000 insignificant -0.0199957 0.411284 lowCoverage 1 lowCoverage 0.932889 0.8056075 0.127525 5 0.926693 0.7895094 0.1371836 2.4371e-11 6.9427e-01 weaklyHypermeth 6.9667e-10 1.0000e+00 weaklyHypermeth 2.4226e-01 4.0473e-01 insignificant 1.0000e+00 1.000000 insignificant 0.062292 2.5158e-01 lowCoverage 1.0000e+00 lowCoverage 0.932767 0.9037133 0.03005254 5 0.91510 0.84464 0.0704626 4.9204e-03 8.5243e-01 weaklyHypermeth 1.4910e-01 1.000000 insignificant 4.2473e-02 0.73811581 weaklyHypermeth 1.00000000 1.00000 insignificant 0.0142623 7.1068e-01 lowCoverage 1.000000 lowCoverage 0.951909 0.8056075 0.146370 5 0.948203 0.7895094 0.1586939 6.6802e-10 9.6018e-01 weaklyHypermeth 2.0243e-08 1.0000e+00 weaklyHypermeth 1.7575e-01 0.62355977 insignificant 1.0000e+00 1.00000 insignificant 0.082288 1.4319e-01 lowCoverage 1.0000e+00 lowCoverage 0.951927 0.903713 0.0469941 5 0.95684 0.844639 0.1121974 7.1975e-06 9.6550e-01 weaklyHypermeth 3.7881e-04 1.000000 weaklyHypermeth 2.3346e-02 0.9489779 weaklyHypermeth 6.1436e-01 1 insignificant 0.0342580 3.8269e-01 lowCoverage 1.0000000 lowCoverage 0.8056075 0.9044118 -0.0996310 5 0.7895094 0.9135665 -0.1240571 2.5052e-01 1.3081e-03 weaklyHypometh 1.00000000 2.7252e-02 weaklyHypometh 0.1925299 4.5075e-01 insignificant 1.00000 1.0000000 insignificant -0.048030 0.41920811 lowCoverage 1.00000 lowCoverage chr11 125457260 125458260 111388 CDON ENSG00000064309 0.17419 94 5 0.2337586 165 5 0.2423565 121 5 0.16511 91 5 0.078823 127 5 0.402167 143 5 0.148627 158 5 0.2278173 137 5 0.1731142 223 5 0.097418 161 5 0.315175 128 5 0.219093 134 5 0.2014266 189 5 0.15018 54 3 0.20569 141 5 0.164737 180 5 0.196400 94 5 0.46035 95 4 0.361212 103 3 0.224282 123 5 0.26462 73 5 0.4909502 60 3 0.12875 105 5 0.126007 74 4 0.193571 57 3 0.26301 150 5 0.160538 103 5 0.193333 54 3 0.2150733 76 5 0.34194 159 5 0.236800 166 5 0.1251799 151 5 0.5883117 85 5 0.5701923 49 2 0.38043 81 4 0.37500 12 1 0.83810 47 4 0.39197 113 5 0.168984 101 5 0.484444 65 3 0.34992 55 2 0.6962500 47 3 0.27436 62 1 0.21992 0.1805310 0.2810141 0.17254 0.14147 0.403120 0.1742228 0.203911 0.1746663 0.076819 0.233559 0.165209 0.2024372 0.14602 0.1782856 0.106920 0.113996 0.3456680 0.18640 0.182930 0.20988 0.3934851 0.15385 0.258655 0.2833141 0.19002 0.158837 0.295251 0.1944155 0.29709 0.1602077 0.1483974 0.2595890 0.2486559 0.22051 0.23611 0.51869 0.142054 0.134400 0.3664277 0.21389 0.4331317 0.129928 1 0.188651 0.214169 -0.01796876 5 0.201794 0.213602 -0.01180763 0.884273 3.6011e-01 insignificant 1 1.000000 insignificant 0.58939 5.6888e-01 insignificant 1 1.000000 insignificant -0.0062170 0.869364 lowCoverage 1 lowCoverage 0.188651 0.4366925 -0.231786 5 0.201794 0.4532162 -0.2514217 5.1658e-01 1.3868e-10 hypomethylated 1.0000e+00 4.6227e-08 hypomethylated 6.0809e-01 1.9485e-04 hypomethylated 1.0000e+00 0.038970 hypomethylated -0.301904 8.2678e-03 lowCoverage 1.9685e-01 lowCoverage 0.188651 0.2272727 -0.03946694 2 0.20179 0.33097 -0.1291795 7.5795e-01 1.9999e-04 lowCoverage 1.0000e+00 0.037925 lowCoverage 9.3261e-01 0.00786099 lowCoverage 1.00000000 1.00000 lowCoverage -0.1726953 1.3184e-01 lowCoverage 1.000000 lowCoverage 0.214169 0.4366925 -0.216883 5 0.213602 0.4532162 -0.2396140 4.6074e-01 1.4983e-06 hypomethylated 1.0000e+00 3.7457e-04 hypomethylated 4.8542e-01 0.00067038 hypomethylated 1.0000e+00 0.16760 insignificant -0.295687 8.3315e-03 lowCoverage 1.8514e-01 lowCoverage 0.214169 0.227273 -0.0182077 2 0.21360 0.330974 -0.1173718 5.6708e-01 5.9276e-03 lowCoverage 1.0000e+00 0.719517 lowCoverage 6.6907e-01 0.0069570 lowCoverage 1.0000e+00 1 lowCoverage -0.1664784 1.4496e-01 lowCoverage 1.0000000 lowCoverage 0.4366925 0.2272727 0.0588572 2 0.4532162 0.3309740 0.1222422 8.9916e-02 7.0969e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1969540 7.8412e-01 lowCoverage 1.00000 1.0000000 lowCoverage 0.129209 0.30312834 lowCoverage 1.00000 lowCoverage chr11 125738777 125739777 111411 ST3GAL4 ENSG00000110080 0.81169 289 7 0.6278321 201 7 0.8288917 174 7 0.77735 202 6 0.602843 103 7 0.823387 366 7 0.655028 164 7 0.6984305 215 7 0.6964657 149 6 0.784043 127 7 0.826383 246 7 0.743927 82 4 0.5703418 134 4 0.86250 38 6 0.52801 124 7 0.702218 60 7 0.602339 50 3 0.71369 362 7 0.471573 280 7 0.641804 211 7 0.74931 119 7 0.3349567 38 3 0.62388 165 7 0.666667 47 4 0.723576 317 6 0.74357 318 7 0.650794 124 6 0.759954 46 3 0.7260780 258 7 0.62164 320 7 0.503651 326 7 0.8080607 247 7 0.2620451 245 7 0.3512633 259 7 0.63992 205 7 0.35004 205 7 0.44218 198 8 0.20303 452 7 0.376279 249 7 0.563400 240 7 0.48339 171 6 0.4799084 320 7 0.62760 145 7 0.84491 0.6492049 0.8397699 0.81306 0.61649 0.834192 0.7846978 0.830125 0.7970182 0.784160 0.787136 0.812202 0.6473715 0.84670 0.7167512 0.795136 0.741430 0.6998430 0.58790 0.697124 0.84811 0.5091597 0.71868 0.792259 0.7378408 0.73757 0.780586 0.785493 0.7926043 0.74246 0.7242577 0.8376884 0.2506668 0.3262950 0.67479 0.28415 0.43848 0.237866 0.495309 0.6142368 0.52047 0.5893911 0.627865 3 0.744199 0.770986 -0.02288636 7 0.700442 0.719789 -0.01934742 0.739502 1.4214e-01 insignificant 1 1.000000 insignificant 0.43418 6.4527e-01 insignificant 1 1.000000 insignificant 0.0390923 0.395956 insignificant 1 insignificant 0.744199 0.3670077 0.393589 7 0.700442 0.3747078 0.3257339 2.6825e-32 9.9988e-01 hypermethylated 2.6825e-29 1.0000e+00 hypermethylated 1.8155e-10 1.0000e+00 hypermethylated 3.6310e-08 1.000000 hypermethylated 0.323691 2.2982e-03 weaklyHypermeth 8.8391e-02 weaklyHypermeth 0.744199 0.5368889 0.19099835 7 0.70044 0.53342 0.1670207 5.2717e-12 9.9609e-01 weaklyHypermeth 5.2717e-09 1.000000 weaklyHypermeth 1.3247e-07 0.99678957 weaklyHypermeth 0.00013247 1.00000 weaklyHypermeth 0.1923218 5.8216e-03 weaklyHypermeth 0.277221 insignificant 0.770986 0.3670077 0.422374 7 0.719789 0.3747078 0.3450813 1.2763e-24 9.9199e-01 hypermethylated 6.3815e-22 1.0000e+00 hypermethylated 1.1192e-07 0.99939165 hypermethylated 1.1318e-05 1.00000 hypermethylated 0.284598 3.9057e-03 weaklyHypermeth 1.1487e-01 insignificant 0.770986 0.536889 0.2094338 7 0.71979 0.533421 0.1863681 8.0464e-13 9.9489e-01 hypermethylated 2.6821e-10 1.000000 hypermethylated 4.2835e-06 0.9960051 hypermethylated 1.4278e-03 1 hypermethylated 0.1532295 2.1695e-02 weaklyHypermeth 0.6988886 insignificant 0.3670077 0.5368889 -0.1776376 7 0.3747078 0.5334210 -0.1587132 2.8343e-01 2.6042e-10 weaklyHypometh 1.00000000 2.8936e-08 weaklyHypometh 0.5749321 8.9190e-04 weaklyHypometh 1.00000 0.0445949 weaklyHypometh -0.131369 0.11942008 insignificant 1.00000 insignificant chr11 125818022 125819022 111414 ST3GAL4 ENSG00000110080 0.32935 33 4 0.3779882 140 5 0.3749625 126 6 0.40794 33 3 0.337163 111 4 0.534722 65 4 0.264504 157 5 0.3588692 108 4 0.4478431 91 4 0.094742 79 3 0.342381 201 5 0.482980 78 3 0.0659770 107 3 0.66667 3 0 0.31550 119 4 0.459565 78 3 0.197527 103 3 0.39405 20 2 0.257277 108 3 0.295024 47 3 0.51280 55 3 0.1904762 11 1 0.36502 93 6 0.383712 61 4 0.419935 42 3 0.36707 157 6 0.516667 63 4 0.255291 57 3 0.1837607 48 3 0.29772 149 5 0.339255 179 6 0.6716108 56 4 0.5134889 146 6 0.3394510 93 5 0.39695 95 4 0.35758 22 2 0.62061 87 5 0.48686 88 5 0.173333 39 5 0.216056 62 4 0.11429 34 3 0.1354167 18 2 0.18519 50 5 0.55295 0.3700359 0.2400536 0.48290 0.18859 0.619327 0.1297012 0.329442 0.2993648 0.111949 0.279376 0.455932 0.1182924 0.69278 0.2731675 0.348745 0.236476 0.2288732 0.20137 0.365191 0.57357 0.3671940 0.31710 0.293401 0.2406579 0.23268 0.436787 0.392354 0.2804398 0.20645 0.1590975 0.6735508 0.3308155 0.1815383 0.12726 0.25353 0.50700 0.230348 0.234742 0.2508384 0.28873 0.2517606 0.286629 1 0.264120 0.333333 -0.03836439 4 0.355636 0.391212 -0.03557601 0.971637 1.3177e-01 lowCoverage 1 1.000000 lowCoverage 0.94578 1.3275e-01 lowCoverage 1 1.000000 lowCoverage -0.0250249 0.631632 lowCoverage 1 lowCoverage 0.264120 0.3578154 -0.063037 4 0.355636 0.4726381 -0.1170026 8.8064e-01 2.1320e-04 lowCoverage 1.0000e+00 3.5534e-02 lowCoverage 7.6441e-01 9.4340e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.102238 8.5596e-02 lowCoverage 1.0000e+00 lowCoverage 0.264120 0.2266010 0.10492348 4 0.35564 0.15963 0.1960041 1.7934e-05 9.9063e-01 lowCoverage 8.9670e-04 1.000000 lowCoverage 5.4868e-04 0.99642624 lowCoverage 0.03919123 1.00000 lowCoverage 0.1853939 3.7135e-05 lowCoverage 0.028812 lowCoverage 0.333333 0.3578154 -0.029970 5 0.391212 0.4726381 -0.0814266 7.1930e-01 1.1862e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.1699e-01 0.07995443 insignificant 1.0000e+00 1.00000 insignificant -0.077213 2.2135e-01 lowCoverage 1.0000e+00 lowCoverage 0.333333 0.226601 0.1610947 4 0.39121 0.159631 0.2315801 5.6795e-06 9.9930e-01 lowCoverage 3.3409e-04 1.000000 lowCoverage 1.9601e-04 0.9997701 lowCoverage 1.8108e-02 1 lowCoverage 0.2104188 3.2777e-04 lowCoverage 0.1092561 lowCoverage 0.3578154 0.2266010 0.1737429 4 0.4726381 0.1596315 0.3130067 5.3222e-05 7.2299e-01 lowCoverage 0.01064435 1.0000e+00 lowCoverage 0.0020397 8.2876e-01 lowCoverage 0.40794 1.0000000 lowCoverage 0.287632 0.00064847 lowCoverage 0.09264 lowCoverage chr11 126072719 126073719 111466 KIRREL3 ENSG00000149571 0.85841 124 5 0.6098433 102 5 0.4570016 76 4 0.85214 121 5 0.757895 48 3 0.866751 241 5 0.915708 47 3 0.8780777 128 4 0.7923179 72 4 0.931585 68 5 0.904638 158 5 0.842857 25 2 0.8264262 89 5 0.86667 45 3 0.85020 128 5 0.650000 30 3 1.000000 6 1 0.84853 177 5 0.883408 156 4 0.843468 169 4 0.94095 56 5 0.8948709 117 5 0.79569 142 5 0.886129 83 5 0.903333 58 5 0.92663 139 5 0.926717 110 4 0.882353 39 3 0.8982836 157 4 0.84502 179 5 0.828761 145 5 0.9340395 213 5 0.7159986 132 5 0.7743032 95 5 0.43774 420 3 0.90000 17 2 0.75242 118 5 0.81460 166 5 0.886340 160 5 0.894917 119 5 0.82785 111 4 0.8100638 162 5 0.84966 140 5 0.82427 0.5577075 0.4324131 0.83388 0.78103 0.863030 0.8801478 0.904418 0.7940985 0.901253 0.861108 0.753165 0.8488537 0.84561 0.8516070 0.566456 0.807140 0.8441837 0.90249 0.837511 0.96203 0.8468438 0.83370 0.952423 0.9482068 0.90807 0.919779 0.812360 0.9040645 0.85833 0.8621538 0.9379068 0.8035007 0.8346387 0.68404 0.97215 0.77671 0.753788 0.899108 0.9211621 0.84093 0.8410576 0.882213 3 0.828856 0.883866 -0.05487729 5 0.837239 0.883114 -0.04587550 0.919886 6.6362e-03 weaklyHypometh 1 0.831459 insignificant 0.77229 8.9908e-05 weaklyHypometh 1 0.089908 weaklyHypometh -0.0667681 0.037238 lowCoverage 1 lowCoverage 0.828856 0.7542194 0.073821 5 0.837239 0.7367207 0.1005179 3.7538e-03 9.9835e-01 weaklyHypermeth 4.8750e-02 1.0000e+00 weaklyHypermeth 6.8134e-02 8.6355e-01 insignificant 8.9649e-01 1.000000 insignificant 0.089286 2.4291e-01 lowCoverage 1.0000e+00 lowCoverage 0.828856 0.8569364 -0.03448331 5 0.83724 0.85250 -0.0152645 4.9831e-01 3.1109e-01 insignificant 1.0000e+00 1.000000 insignificant 4.3898e-01 0.10297748 insignificant 1.00000000 1.00000 insignificant -0.0319690 3.2888e-01 lowCoverage 1.000000 lowCoverage 0.883866 0.7542194 0.130909 5 0.883114 0.7367207 0.1463934 2.9882e-08 9.9976e-01 weaklyHypermeth 7.8636e-07 1.0000e+00 weaklyHypermeth 5.3855e-03 0.99565199 weaklyHypermeth 9.6169e-02 1.00000 weaklyHypermeth 0.156054 5.9439e-02 lowCoverage 8.2554e-01 lowCoverage 0.883866 0.856936 0.0209118 5 0.88311 0.852503 0.0306110 7.4920e-02 9.0373e-01 insignificant 1.0000e+00 1.000000 insignificant 2.2895e-02 0.8542322 weaklyHypermeth 6.1436e-01 1 insignificant 0.0347990 1.2891e-01 lowCoverage 1.0000000 lowCoverage 0.7542194 0.8569364 -0.1144888 5 0.7367207 0.8525031 -0.1157825 9.9845e-01 3.4075e-04 weaklyHypometh 1.00000000 8.7820e-03 weaklyHypometh 0.9797188 1.2357e-01 insignificant 1.00000 1.0000000 insignificant -0.121255 0.12060718 lowCoverage 1.00000 lowCoverage chr11 126072924 126073924 111467 KIRREL3 ENSG00000149571 0.88201 125 5 0.6007954 111 6 0.3941727 83 5 0.71012 122 5 0.742690 51 3 0.824856 254 6 0.915708 47 3 0.9024621 131 4 0.6602649 75 4 0.901321 72 5 0.823309 170 6 0.780612 30 2 0.6886885 90 5 0.81667 48 3 0.87517 130 5 0.541667 31 3 0.666667 7 1 0.79044 179 5 0.906727 157 4 0.849774 177 5 0.86746 64 6 0.7873924 121 5 0.80593 149 6 0.821774 91 6 0.836111 60 5 0.66188 143 5 0.781373 115 5 0.755882 43 3 0.8186269 159 4 0.80835 187 6 0.757301 150 6 0.9241995 221 6 0.6522210 144 6 0.6452527 97 5 0.48978 424 3 0.90000 17 2 0.68654 146 6 0.81773 172 6 0.821950 162 5 0.894917 119 5 0.78228 116 5 0.8100638 162 5 0.79138 142 5 0.82966 0.5576415 0.4235310 0.80830 0.77753 0.855433 0.8683880 0.907350 0.7697397 0.896614 0.847475 0.737730 0.8228152 0.84012 0.8561590 0.549080 0.782381 0.8336259 0.90548 0.838661 0.94785 0.8285357 0.83442 0.938545 0.9344581 0.88022 0.897699 0.795110 0.8916699 0.85118 0.8479773 0.9359771 0.7890784 0.8090363 0.68606 0.95628 0.76384 0.756228 0.886866 0.9092655 0.83354 0.8316182 0.870488 3 0.817703 0.867598 -0.05169269 5 0.816834 0.704456 0.11237758 0.961619 2.9575e-02 weaklyHypometh 1 1.000000 insignificant 0.75019 8.5956e-04 weaklyHypometh 1 0.429779 insignificant -0.0384839 0.297166 lowCoverage 1 lowCoverage 0.817616 0.7370000 0.075190 5 0.786306 0.6844467 0.1018597 3.9724e-03 9.9910e-01 weaklyHypermeth 5.0929e-02 1.0000e+00 weaklyHypermeth 8.7256e-02 8.9630e-01 insignificant 1.0000e+00 1.000000 insignificant 0.065119 3.5584e-01 lowCoverage 1.0000e+00 lowCoverage 0.817616 0.8530670 -0.03429727 5 0.78631 0.80301 -0.0167055 5.6871e-01 3.5188e-01 insignificant 1.0000e+00 1.000000 insignificant 4.8131e-01 0.15012678 insignificant 1.00000000 1.00000 insignificant -0.0564123 1.4194e-01 lowCoverage 1.000000 lowCoverage 0.868176 0.7370000 0.129158 6 0.821866 0.6844467 0.1374192 5.3730e-08 9.9979e-01 weaklyHypermeth 1.3105e-06 1.0000e+00 weaklyHypermeth 8.9888e-03 0.99430758 weaklyHypermeth 1.5072e-01 1.00000 insignificant 0.103603 1.4342e-01 lowCoverage 1.0000e+00 lowCoverage 0.868176 0.853067 0.0199950 5 0.82187 0.803012 0.0188540 1.1586e-01 8.8033e-01 insignificant 1.0000e+00 1.000000 insignificant 4.7354e-02 0.7628910 weaklyHypermeth 1.0000e+00 1 insignificant -0.0179285 5.2418e-01 insignificant 1.0000000 insignificant 0.7370000 0.8530670 -0.1147717 5 0.6844467 0.8030119 -0.1185652 9.9936e-01 3.4250e-04 weaklyHypometh 1.00000000 8.7820e-03 weaklyHypometh 0.9880961 1.4354e-01 insignificant 1.00000 1.0000000 insignificant -0.121532 0.09687635 lowCoverage 1.00000 lowCoverage chr11 128171067 128172067 111709 FLI1 ENSG00000151702 0.69454 67 5 0.6599567 82 6 0.5750000 50 5 0.72667 52 4 0.704545 30 2 0.647213 62 5 0.569697 35 5 0.6500000 66 5 0.7150000 24 2 0.657143 23 2 0.727188 132 5 0.500000 19 0 0.7407407 32 2 0.82692 27 2 0.73467 65 5 0.733333 16 1 1.000000 3 0 0.67827 71 6 0.622222 60 5 0.725614 59 5 0.90000 22 1 0.6250000 7 0 0.68333 39 1 0.678571 43 3 0.641026 46 4 0.72139 73 5 0.572078 28 2 0.666667 19 2 0.7115686 62 5 0.72464 77 5 0.716868 69 5 0.7307692 66 5 0.6251984 62 5 0.6111111 26 1 0.64916 82 5 0.80000 15 2 0.68333 34 2 0.72167 51 5 0.667222 40 2 0.717814 85 5 0.72052 59 4 0.7976190 16 1 0.59511 65 5 0.71868 0.7306966 0.5833333 0.78485 0.66529 0.722197 0.5647383 0.682900 0.7113636 0.740260 0.785244 0.424242 0.7643098 0.84266 0.7328769 0.717172 0.826911 0.7324718 0.69177 0.766614 0.92424 0.7226252 0.71970 0.714286 0.6363636 0.77738 0.537288 0.696970 0.7672311 0.78085 0.7681901 0.7960373 0.6130952 0.5656566 0.71556 0.72114 0.66919 0.758838 0.678081 0.7798430 0.74917 0.7357712 0.669023 1 0.673846 0.702359 -0.02797071 5 0.693560 0.691092 0.00246878 0.772045 3.4561e-01 insignificant 1 1.000000 insignificant 0.78146 4.3969e-01 insignificant 1 1.000000 insignificant -0.0032227 0.921617 lowCoverage 1 lowCoverage 0.673846 0.6407407 0.047218 5 0.693560 0.6876302 0.0059301 1.3759e-01 6.1616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2747e-01 6.6628e-01 insignificant 1.0000e+00 1.000000 insignificant 0.012691 7.3602e-01 lowCoverage 1.0000e+00 lowCoverage 0.673846 0.7698113 -0.01489146 5 0.69356 0.73301 -0.0394452 8.7055e-01 4.4297e-01 insignificant 1.0000e+00 1.000000 insignificant 7.6834e-01 0.65112819 insignificant 1.00000000 1.00000 insignificant -0.0052209 9.0058e-01 lowCoverage 1.000000 lowCoverage 0.702359 0.6407407 0.074435 5 0.691092 0.6876302 0.0034613 1.0103e-01 6.2620e-01 insignificant 9.8085e-01 1.0000e+00 insignificant 2.3646e-01 0.79231010 insignificant 1.0000e+00 1.00000 insignificant 0.015914 6.7369e-01 lowCoverage 1.0000e+00 lowCoverage 0.702359 0.769811 0.0156698 5 0.69109 0.733006 -0.0419140 6.5178e-01 6.2496e-01 insignificant 1.0000e+00 1.000000 insignificant 5.1657e-01 0.8382149 insignificant 1.0000e+00 1 insignificant -0.0019983 9.6191e-01 lowCoverage 1.0000000 lowCoverage 0.6407407 0.7698113 -0.0645329 5 0.6876302 0.7330055 -0.0453753 9.8651e-01 1.6078e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.9196873 5.8832e-01 insignificant 1.00000 1.0000000 insignificant -0.017912 0.69474505 lowCoverage 1.00000 lowCoverage chr11 128833701 128834701 111729 BARX2 ENSG00000043039 0.81026 99 5 0.7401619 75 5 0.2375000 32 1 0.61696 58 5 NA 0 0 0.865008 87 5 0.600000 5 0 0.5766667 31 4 0.7000000 26 1 0.960000 22 2 0.876859 101 5 0.100000 10 0 0.7188264 77 5 NA 0 0 0.56000 17 1 0.000000 16 0 0.300000 8 0 0.36310 76 5 0.969231 27 1 0.810760 85 5 0.93007 51 5 0.3928571 48 5 0.66667 45 5 0.835556 38 5 0.857143 29 4 0.86742 92 5 0.773636 29 3 1.000000 9 0 0.7106061 56 5 0.79543 112 5 0.780241 81 5 0.8421970 169 5 0.0526573 113 5 0.1229249 110 5 0.00000 68 1 0.17003 115 5 0.00000 31 3 0.05000 128 5 0.266669 135 5 0.364022 175 5 0.29920 124 5 0.1674735 171 5 0.39460 115 5 0.82495 0.7466119 0.2415541 0.61796 NA 0.874970 0.5945946 0.585586 0.7702703 0.967568 0.883456 0.135135 0.7598015 NA 0.5765766 0.000000 0.337838 0.3910875 0.97921 0.831267 0.93498 0.4133419 0.69970 0.882883 0.8378378 0.88691 0.740295 1.000000 0.7334152 0.83569 0.8162733 0.8369165 0.0607636 0.1379126 NA 0.20398 0.00000 0.033784 0.310712 0.4057796 0.33464 0.1932753 0.444693 0 0.687793 0.791831 -0.08791851 5 0.690722 0.789906 -0.09918340 0.995335 9.7190e-03 weaklyHypometh 1 0.971902 insignificant 0.99908 4.9263e-03 weaklyHypometh 1 1.000000 insignificant -0.1873565 0.029586 lowCoverage 1 lowCoverage 0.687793 0.0831858 0.605534 5 0.690722 0.0895989 0.6011233 1.8178e-19 1.0000e+00 hypermethylated 1.0099e-17 1.0000e+00 hypermethylated 1.0403e-07 1.0000e+00 hypermethylated 6.5019e-06 1.000000 hypermethylated 0.534361 3.8846e-07 lowCoverage 3.8846e-05 lowCoverage 0.687793 0.2902778 0.41393976 5 0.69072 0.29434 0.3963859 1.4369e-10 1.0000e+00 hypermethylated 4.7896e-08 1.000000 hypermethylated 2.1823e-04 0.99999688 hypermethylated 0.01983868 1.00000 hypermethylated 0.3019032 1.0566e-03 lowCoverage 0.139878 lowCoverage 0.791831 0.0831858 0.702169 5 0.789906 0.0895989 0.7003067 2.9118e-30 1.0000e+00 hypermethylated 2.9118e-27 1.0000e+00 hypermethylated 2.5326e-11 1.00000000 hypermethylated 2.5326e-08 1.00000 hypermethylated 0.721717 2.7783e-10 lowCoverage 3.9691e-08 lowCoverage 0.791831 0.290278 0.4952975 5 0.78991 0.294336 0.4955693 6.0319e-21 1.0000e+00 hypermethylated 6.0319e-18 1.000000 hypermethylated 1.4822e-10 1.0000000 hypermethylated 1.4822e-07 1 hypermethylated 0.4892596 1.7958e-06 lowCoverage 0.0017958 lowCoverage 0.0831858 0.2902778 -0.1878456 5 0.0895989 0.2943363 -0.2047374 9.9999e-01 2.8834e-06 weaklyHypometh 1.00000000 1.3731e-04 weaklyHypometh 0.9999970 3.8684e-05 weaklyHypometh 1.00000 0.0038684 weaklyHypometh -0.232458 0.00168909 lowCoverage 0.15167 lowCoverage chr11 130716583 130717583 111826 ENSG00000221516 0.87537 80 7 0.9069854 1695 8 0.8147848 924 8 0.96820 198 8 NA 0 0 0.933941 242 8 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.72845 82 8 NA 0 0 0.945208 275 8 NA 0 0 NA 0 0 0.92300 357 8 NA 0 0 NA 0 0 0.95899 561 8 NA 0 0 NA 0 0 NA 0 0 0.94142 686 8 0.948170 462 8 0.9397516 248 8 0.6799196 1706 8 NA 0 0 0.66191 512 8 NA 0 0 NA 0 0 0.50665 572 8 0.899148 62 6 0.965021 368 8 0.94534 80 7 0.9318910 103 8 0.92440 64 8 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.887014 0.943820 -0.05720411 8 0.886100 0.944411 -0.05831082 0.999999 2.5896e-05 weaklyHypometh 1 0.025896 weaklyHypometh 0.99960 7.8009e-03 weaklyHypometh 1 1.000000 insignificant -0.0604197 0.109212 lowCoverage 1 lowCoverage 0.887014 0.6405018 0.246557 8 0.886100 0.6402573 0.2458426 8.0072e-17 1.0000e+00 hypermethylated 3.6396e-15 1.0000e+00 hypermethylated 1.7494e-07 1.0000e+00 hypermethylated 9.7189e-06 1.000000 hypermethylated 0.265688 1.8953e-02 lowCoverage 3.2677e-01 lowCoverage 0.887014 0.9483013 -0.06149126 8 0.88610 0.94677 -0.0606700 9.9989e-01 2.2755e-04 weaklyHypometh 1.0000e+00 0.037925 weaklyHypometh 9.9870e-01 0.00423961 weaklyHypometh 1.00000000 0.84792 insignificant -0.0513122 1.7058e-01 lowCoverage 1.000000 lowCoverage 0.943820 0.6405018 0.304360 8 0.944411 0.6402573 0.3041534 1.1566e-22 1.0000e+00 hypermethylated 1.9277e-20 1.0000e+00 hypermethylated 9.3201e-08 1.00000000 hypermethylated 1.1318e-05 1.00000 hypermethylated 0.326108 2.6158e-02 lowCoverage 4.4335e-01 lowCoverage 0.943820 0.948301 -0.0045557 8 0.94441 0.946770 -0.0023592 7.7916e-01 1.1453e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8783e-01 0.1175995 insignificant 1.0000e+00 1 insignificant 0.0091075 4.9086e-01 lowCoverage 1.0000000 lowCoverage 0.6405018 0.9483013 -0.3077542 8 0.6402573 0.9467699 -0.3065126 1.0000e+00 1.5720e-17 hypomethylated 1.00000000 1.5720e-14 hypomethylated 1.0000000 8.0492e-07 hypomethylated 1.00000 0.0004729 hypomethylated -0.317000 0.02505750 lowCoverage 0.55137 lowCoverage chr11 130959695 130960695 111868 ENSG00000209224 0.40873 113 8 0.2165282 334 8 0.6166459 101 5 0.34280 98 8 0.371451 98 6 0.542805 270 8 0.291919 257 8 0.5635002 193 5 0.4888996 122 6 0.492729 51 5 0.643535 229 8 0.788889 18 1 0.4476190 53 5 0.66975 57 5 0.17381 78 5 0.200000 48 5 0.555556 10 1 0.60398 93 5 0.300000 105 8 0.291759 203 8 0.57064 73 5 0.4285714 45 5 0.45641 45 2 0.350466 115 5 0.208400 187 5 0.24241 255 8 0.390972 139 8 0.641935 62 5 0.5842262 143 8 0.18727 375 8 0.408754 321 8 0.6248017 221 8 0.3405612 208 8 0.3836989 96 8 0.47877 120 5 0.20833 33 2 0.48128 173 8 0.17895 207 5 0.517327 197 8 0.738497 183 8 0.38918 80 7 0.8619792 49 1 0.44992 114 8 0.31600 0.2462862 0.4798052 0.27170 0.38864 0.499196 0.2030019 0.478397 0.3604797 0.487726 0.523658 0.784559 0.2469275 0.62003 0.2263130 0.235995 NA 0.5016403 0.15368 0.252057 0.47134 0.2804037 0.29598 0.311905 0.1484587 0.16218 0.351552 0.656784 0.4652486 0.14044 0.2551808 0.6218762 0.2321140 0.1610057 0.26301 0.12880 0.32390 0.106748 0.413980 0.6468196 0.31443 0.7735907 0.338986 2 0.374556 0.308742 0.06761264 8 0.454164 0.399673 0.05449182 0.063914 8.2800e-01 insignificant 1 1.000000 insignificant 0.41492 6.6527e-01 insignificant 1 1.000000 insignificant 0.0259736 0.669529 insignificant 1 insignificant 0.374556 0.2095808 0.144267 6 0.454164 0.4168580 0.0373064 3.9506e-04 4.8258e-01 weaklyHypermeth 5.6438e-03 1.0000e+00 weaklyHypermeth 1.3849e-04 6.0848e-01 weaklyHypermeth 4.0731e-03 1.000000 weaklyHypermeth 0.105280 1.3740e-01 insignificant 1.0000e+00 insignificant 0.374556 0.5168539 -0.14338838 8 0.45416 0.61322 -0.1590556 9.9997e-01 9.6858e-05 weaklyHypometh 1.0000e+00 0.032286 weaklyHypometh 9.9934e-01 0.01996386 weaklyHypometh 1.00000000 1.00000 insignificant -0.1408364 2.0349e-01 insignificant 1.000000 insignificant 0.308935 0.2090800 0.087285 6 0.409705 0.3751722 0.0345331 2.2235e-02 4.0399e-01 weaklyHypermeth 2.5557e-01 1.0000e+00 insignificant 9.1490e-03 0.77509185 weaklyHypermeth 1.5072e-01 1.00000 insignificant 0.079306 2.7976e-01 insignificant 1.0000e+00 insignificant 0.308742 0.516854 -0.2037515 8 0.39967 0.613220 -0.2135474 1.0000e+00 1.0246e-05 hypomethylated 1.0000e+00 0.005123 hypomethylated 1.0000e+00 0.0070766 weaklyHypometh 1.0000e+00 1 insignificant -0.1668100 1.4752e-01 insignificant 1.0000000 insignificant 0.2095808 0.5168539 -0.2831565 6 0.4168580 0.6132200 -0.1963620 9.6389e-01 3.7674e-08 hypomethylated 1.00000000 2.5116e-06 hypomethylated 0.9928674 1.3157e-04 hypomethylated 1.00000 0.0087711 hypomethylated -0.246117 0.05228492 insignificant 0.85382 insignificant chr11 130959881 130960881 111869 ENSG00000209224 0.40873 113 8 0.2165282 334 8 0.6166459 101 5 0.34280 98 8 0.371451 98 6 0.542805 270 8 0.291919 257 8 0.5635002 193 5 0.4888996 122 6 0.492729 51 5 0.643535 229 8 0.788889 18 1 0.4476190 53 5 0.66975 57 5 0.17381 78 5 0.200000 48 5 0.555556 10 1 0.60398 93 5 0.300000 105 8 0.291759 203 8 0.57064 73 5 0.4285714 45 5 0.45641 45 2 0.350466 115 5 0.208400 187 5 0.24241 255 8 0.390972 139 8 0.641935 62 5 0.5842262 143 8 0.18727 375 8 0.408754 321 8 0.6248017 221 8 0.3405612 208 8 0.3836989 96 8 0.47877 120 5 0.20833 33 2 0.48128 173 8 0.17895 207 5 0.517327 197 8 0.738497 183 8 0.38918 80 7 0.8619792 49 1 0.44992 114 8 0.31600 0.2462862 0.4798052 0.27170 0.38864 0.499196 0.2030019 0.478397 0.3604797 0.487726 0.523658 0.784559 0.2469275 0.62003 0.2263130 0.235995 NA 0.5016403 0.15368 0.252057 0.47134 0.2804037 0.29598 0.311905 0.1484587 0.16218 0.351552 0.656784 0.4652486 0.14044 0.2551808 0.6218762 0.2321140 0.1610057 0.26301 0.12880 0.32390 0.106748 0.413980 0.6468196 0.31443 0.7735907 0.338986 2 0.374556 0.308742 0.06761264 8 0.454164 0.399673 0.05449182 0.063914 8.2800e-01 insignificant 1 1.000000 insignificant 0.41492 6.6527e-01 insignificant 1 1.000000 insignificant 0.0259736 0.669529 insignificant 1 insignificant 0.374556 0.2095808 0.144267 6 0.454164 0.4168580 0.0373064 3.9506e-04 4.8258e-01 weaklyHypermeth 5.6438e-03 1.0000e+00 weaklyHypermeth 1.3849e-04 6.0848e-01 weaklyHypermeth 4.0731e-03 1.000000 weaklyHypermeth 0.105280 1.3740e-01 insignificant 1.0000e+00 insignificant 0.374556 0.5168539 -0.14338838 8 0.45416 0.61322 -0.1590556 9.9997e-01 9.6858e-05 weaklyHypometh 1.0000e+00 0.032286 weaklyHypometh 9.9934e-01 0.01996386 weaklyHypometh 1.00000000 1.00000 insignificant -0.1408364 2.0349e-01 insignificant 1.000000 insignificant 0.308935 0.2090800 0.087285 6 0.409705 0.3751722 0.0345331 2.2235e-02 4.0399e-01 weaklyHypermeth 2.5557e-01 1.0000e+00 insignificant 9.1490e-03 0.77509185 weaklyHypermeth 1.5072e-01 1.00000 insignificant 0.079306 2.7976e-01 insignificant 1.0000e+00 insignificant 0.308742 0.516854 -0.2037515 8 0.39967 0.613220 -0.2135474 1.0000e+00 1.0246e-05 hypomethylated 1.0000e+00 0.005123 hypomethylated 1.0000e+00 0.0070766 weaklyHypometh 1.0000e+00 1 insignificant -0.1668100 1.4752e-01 insignificant 1.0000000 insignificant 0.2095808 0.5168539 -0.2831565 6 0.4168580 0.6132200 -0.1963620 9.6389e-01 3.7674e-08 hypomethylated 1.00000000 2.5116e-06 hypomethylated 0.9928674 1.3157e-04 hypomethylated 1.00000 0.0087711 hypomethylated -0.246117 0.05228492 insignificant 0.85382 insignificant chr11 133045590 133046590 112155 ENSG00000183715 0.798651 277 8 0.587328 174 6 0.576550 134 8 0.80373 144 8 0.740367 83 7 0.73062 296 8 0.783490 104 7 0.83908 153 7 0.672580 96 8 0.808494 122 8 0.78697 233 8 0.694444 39 5 0.639389 168 8 0.89286 34 4 0.758480 101 8 0.767045 55 4 0.835006 51 5 0.840961 158 8 0.712949 174 8 0.82712 285 8 0.772222 41 4 0.79792 94 8 0.83500 133 8 0.749306 45 4 0.73494 48 3 0.809463 246 8 0.750283 90 6 0.680556 40 4 0.70279 148 6 0.794571 210 8 0.794956 208 8 0.77877 370 8 0.7478036 200 7 0.6800740 112 8 0.668809 153 6 0.7791667 49 4 0.754865 81 6 0.81238546 229 8 0.8485602 224 8 0.913451 213 8 0.7449414 159 8 0.90393 204 6 0.8480790 179 8 0.85012 0.753413 0.72143 0.87257 0.836622 0.83549 0.79666 0.853970 0.745982 0.77933 0.77661 0.73671 0.801688 0.87174 0.787606 0.778887 0.798579 0.885280 0.805079 0.83367 0.87430 0.877357 0.85981 0.74680 0.732427 0.815016 0.859885 0.840138 0.81271 0.795353 0.81958 0.85292 0.7184839 0.7597184 0.6792692 0.7983165 0.8316751 0.7810413 0.861497 0.91761 0.827819 0.892969 0.870573 3 0.79833 0.818888 -0.01684501 8 0.70263 0.71743 -0.01479815 0.997349 0.03113660 weaklyHypometh 1 1.00000 insignificant 0.95465 0.06911532 insignificant 1 1.00000 insignificant -0.0119257 0.6112424 insignificant 1 insignificant 0.79833 0.729369 0.064795 8 0.70263 0.797695 -0.095065 7.6430e-03 9.9994e-01 weaklyHypermeth 1.1407e-01 1.0000000 insignificant 2.4802e-01 0.8929606 insignificant 1.0000e+00 1 insignificant 0.0142879 6.4070e-01 insignificant 1.0000e+00 insignificant 0.79805 0.864147 -0.0640069 8 0.67560 0.882115 -0.2065190 1.0000e+00 8.3007e-03 weaklyHypometh 1.0000e+00 6.3851e-01 insignificant 1.0000e+00 1.1585e-03 weaklyHypometh 1.0000e+00 1.5039e-01 insignificant -0.0969875 0.02704722 weaklyHypometh 0.872491 insignificant 0.818888 0.729369 0.079434 8 0.71743 0.797695 -0.0802671 4.6069e-05 9.9958e-01 weaklyHypermeth 9.2138e-04 1.000000 weaklyHypermeth 5.0739e-02 0.9837076 insignificant 7.8061e-01 1 insignificant 0.026214 3.4725e-01 insignificant 1.0000e+00 insignificant 0.81987 0.864147 -0.0440196 8 0.78265 0.88212 -0.0994665 9.9970e-01 5.9543e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9585e-01 3.4428e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0850618 4.3299e-02 weaklyHypometh 1.000000 insignificant 0.728710 0.864147 -0.12864389 8 0.779304 0.882115 -0.1028115 1.0000000 2.0309e-06 weaklyHypometh 1.0000 8.1235e-05 weaklyHypometh 1.0000000 1.9537e-03 weaklyHypometh 1 7.5141e-02 weaklyHypometh -0.111275 1.8703e-02 weaklyHypometh 4.9698e-01 insignificant chr11 133325557 133326557 112178 ENSG00000213153 0.666124 231 8 0.368493 210 6 0.330504 189 7 0.50351 181 8 0.496173 116 6 0.62024 242 8 0.436643 171 6 0.42117 191 7 0.389345 177 6 0.544182 188 6 0.30050 258 6 0.541054 69 4 0.529274 242 6 0.38276 139 6 0.454196 193 6 0.333333 74 6 0.071429 12 0 0.415415 181 8 0.505773 391 8 0.70474 248 7 0.616771 172 6 0.44228 131 6 0.40428 163 6 0.414265 137 6 0.59792 129 6 0.367508 298 8 0.348560 293 7 0.328861 195 5 0.54943 216 6 0.496220 306 7 0.388892 267 8 0.38641 293 8 0.2927233 215 7 0.3704600 179 6 0.403125 217 8 0.3062500 102 5 0.229912 250 7 0.26696296 274 8 0.6281575 215 8 0.569922 227 8 0.7027273 133 8 0.48319 158 8 0.4972591 172 8 0.44579 0.255951 0.31468 0.38635 0.411095 0.58354 0.34413 0.338447 0.351744 0.50901 0.33287 0.44874 0.285326 0.35222 0.364656 0.281795 0.276647 0.338451 0.351471 0.41661 0.50291 0.369616 0.55384 0.38635 0.394644 0.341336 0.467570 0.295080 0.43278 0.280540 0.32125 0.46739 0.2299751 0.2379338 0.2158667 0.1472000 0.1997802 0.1263802 0.444305 0.41345 0.467552 0.353445 0.394777 6 0.48473 0.465404 -0.00470150 7 0.48860 0.37033 0.11826872 0.643573 0.97698499 insignificant 1 1.00000 insignificant 0.91330 0.77114680 insignificant 1 1.00000 insignificant 0.0056277 0.8953251 insignificant 1 insignificant 0.48486 0.336032 0.159671 7 0.52117 0.338251 0.182921 8.3998e-09 1.0000e+00 weaklyHypermeth 1.9534e-07 1.0000000 weaklyHypermeth 7.5530e-06 0.9998877 weaklyHypermeth 3.4332e-04 1 weaklyHypermeth 0.1391712 3.1490e-03 weaklyHypermeth 9.2616e-02 weaklyHypermeth 0.48497 0.552222 -0.0436574 7 0.52646 0.598155 -0.0716898 8.9692e-01 4.2025e-05 weaklyHypometh 1.0000e+00 8.9863e-03 weaklyHypometh 9.4940e-01 1.6259e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1255071 0.03721633 weaklyHypometh 1.000000 insignificant 0.465404 0.335761 0.167267 7 0.37033 0.317110 0.0532195 3.4379e-04 1.0000e+00 weaklyHypermeth 6.3665e-03 1.000000 weaklyHypermeth 1.3736e-04 0.9999983 weaklyHypermeth 4.4310e-03 1 weaklyHypermeth 0.133543 3.6762e-03 weaklyHypermeth 1.0503e-01 insignificant 0.46448 0.550885 -0.0333154 7 0.36609 0.54842 -0.1823269 9.9097e-01 1.0471e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8242e-01 8.3198e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.1311348 2.9828e-02 weaklyHypometh 1.000000 insignificant 0.336039 0.552222 -0.19606412 8 0.339481 0.598155 -0.2586741 1.0000000 5.4328e-08 weaklyHypometh 1.0000 3.3955e-06 weaklyHypometh 0.9999988 1.3479e-04 weaklyHypometh 1 7.4881e-03 weaklyHypometh -0.264678 9.6339e-04 hypomethylated 6.4226e-02 hypomethylated chr11 133408287 133409287 112183 ENSG00000204241 0.174701 231 7 0.082963 458 7 0.126613 388 7 0.36122 167 4 0.077434 385 7 0.23973 512 6 0.093138 516 7 0.08821 362 7 0.108533 414 7 0.095009 363 6 0.15519 426 7 0.113647 360 6 0.050131 338 6 0.25000 99 2 0.070032 470 7 0.160784 433 7 0.049632 406 4 0.210066 218 3 0.074664 414 7 0.16437 475 5 0.181438 169 7 0.16667 13 1 0.13469 200 7 0.089595 157 7 0.18889 32 3 0.057537 401 7 0.116484 218 7 0.118261 149 6 0.11755 384 7 0.077117 527 7 0.076082 448 7 0.36168 349 6 0.0060068 373 7 0.0066445 367 7 0.022161 512 6 0.0000000 12 1 0.138937 258 7 0.01704545 468 7 0.2459390 480 7 0.143065 333 5 0.0957918 208 3 0.16701 229 4 0.1558563 255 7 0.31232 0.148613 0.23888 0.26390 0.211353 0.42585 0.24279 0.229773 0.253821 0.26277 0.31985 0.29056 0.131461 0.23016 0.194635 0.362740 0.250306 0.278914 0.188910 0.25099 0.41629 0.042345 0.27110 0.15776 0.368692 0.160067 0.182401 0.111879 0.22304 0.172845 0.16448 0.44237 0.0109323 0.0013028 0.0047906 0.0076371 0.0231594 0.0057296 0.188117 0.12794 0.162856 0.143096 0.122010 2 0.14857 0.168691 0.01435712 7 0.12742 0.15532 -0.02790142 0.614773 0.21909126 insignificant 1 1.00000 insignificant 0.35800 0.32410557 insignificant 1 1.00000 insignificant -0.0031959 0.9145093 insignificant 1 insignificant 0.14859 0.013568 0.165367 7 0.14335 0.078793 0.064557 3.4060e-11 8.7006e-01 weaklyHypermeth 1.0644e-09 1.0000000 weaklyHypermeth 1.1674e-06 0.9997520 weaklyHypermeth 6.8672e-05 1 weaklyHypermeth 0.1055043 2.5216e-03 weaklyHypermeth 8.3794e-02 weaklyHypermeth 0.14849 0.133555 0.0955086 5 0.10168 0.250611 -0.1489280 8.1798e-04 4.9379e-03 weaklyHypermeth 3.8951e-02 4.9379e-01 weaklyHypermeth 3.8837e-05 4.5602e-01 weaklyHypermeth 4.3153e-03 1.0000e+00 weaklyHypermeth -0.0242294 0.44218948 insignificant 1.000000 insignificant 0.169190 0.013568 0.153175 7 0.17474 0.078793 0.0959462 1.1804e-06 9.9934e-01 weaklyHypermeth 2.6231e-05 1.000000 weaklyHypermeth 7.6184e-05 0.9999924 weaklyHypermeth 2.5395e-03 1 weaklyHypermeth 0.108700 4.1163e-03 weaklyHypermeth 1.1434e-01 insignificant 0.16847 0.133555 0.0695154 5 0.11224 0.25061 -0.1383722 3.2721e-02 5.6922e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 9.0498e-02 6.9243e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0210335 5.4644e-01 insignificant 1.000000 insignificant 0.012594 0.132979 -0.13312686 5 0.032906 0.143555 -0.1106496 0.9994888 1.4209e-07 weaklyHypometh 1.0000 7.1046e-06 weaklyHypometh 0.9946051 8.9289e-04 weaklyHypometh 1 3.7204e-02 weaklyHypometh -0.129734 3.5469e-03 weaklyHypometh 1.6122e-01 insignificant chr11 133422375 133423375 112184 ENSG00000204241 0.614191 345 6 0.421671 331 6 0.613871 137 6 0.58671 273 6 0.328454 67 6 0.66032 405 6 0.434930 128 6 0.55570 195 6 0.487427 126 5 0.401291 85 6 0.69468 318 6 0.576122 79 3 0.309865 138 5 0.60556 41 3 0.532242 93 4 0.324845 53 3 0.529735 71 3 0.471004 389 6 0.355566 210 5 0.47138 334 6 0.653705 97 6 0.46667 50 2 0.71334 141 6 0.533086 79 6 0.40245 88 2 0.477196 275 6 0.343143 127 6 0.113017 48 4 0.58030 242 6 0.552610 331 6 0.311905 385 6 0.71282 362 6 0.0134363 252 6 0.0310270 195 6 0.000000 162 3 0.0217391 75 4 0.138124 186 7 0.19735423 342 6 0.7094382 287 6 0.524087 374 6 0.6335675 346 6 0.46050 282 4 0.6370635 290 6 0.63949 0.415075 0.51650 0.39786 0.359022 0.67778 0.55205 0.313757 0.416131 0.52700 0.52750 0.57404 0.190556 0.47132 0.431298 0.547033 0.468394 0.341749 0.258972 0.45595 0.82778 0.278119 0.49391 0.46138 0.364777 0.402508 0.399031 0.208226 0.45654 0.366975 0.35058 0.62355 0.0057702 0.0227240 0.0238784 0.0139447 0.0320399 0.0893005 0.610406 0.64429 0.515714 0.457644 0.512904 3 0.49620 0.514157 -0.00292002 6 0.52556 0.40024 0.12532060 0.847333 0.80211330 insignificant 1 1.00000 insignificant 0.83021 0.86091849 insignificant 1 1.00000 insignificant 0.0104249 0.8578519 insignificant 1 insignificant 0.49593 0.055281 0.465657 6 0.44862 0.161381 0.287235 1.0984e-24 9.9997e-01 hypermethylated 1.0985e-22 1.0000000 hypermethylated 2.3878e-11 0.9983287 hypermethylated 3.4112e-09 1 hypermethylated 0.4318315 2.8269e-07 hypermethylated 3.5336e-05 hypermethylated 0.49593 0.526282 -0.0767754 6 0.44862 0.556747 -0.1081310 9.8646e-01 7.3593e-03 weaklyHypometh 1.0000e+00 6.1328e-01 insignificant 9.9536e-01 2.2038e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0941525 0.10989110 insignificant 1.000000 insignificant 0.514633 0.055281 0.475196 6 0.45863 0.161381 0.2972512 4.8285e-21 9.9999e-01 hypermethylated 4.4748e-19 1.000000 hypermethylated 1.6366e-08 0.9936838 hypermethylated 2.0457e-06 1 hypermethylated 0.421407 3.4144e-06 hypermethylated 3.1040e-04 hypermethylated 0.51463 0.526282 -0.0793858 6 0.45863 0.55675 -0.0981151 9.9695e-01 1.5373e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9663e-01 1.9851e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.1045774 1.4589e-01 insignificant 1.000000 insignificant 0.055281 0.526282 -0.56099865 6 0.161381 0.556747 -0.3953663 0.9993801 1.8976e-24 hypomethylated 1.0000 3.7951e-22 hypomethylated 0.9999963 1.0774e-07 hypomethylated 1 1.5391e-05 hypomethylated -0.525984 1.5337e-05 hypomethylated 1.9171e-03 hypomethylated chr11 133842803 133843803 112190 ENSG00000216049 0.925721 267 6 0.828488 169 6 0.753386 148 6 0.91474 211 5 0.957143 46 5 0.90968 325 5 0.763333 50 5 0.81640 116 5 0.856667 73 5 0.902879 90 5 0.89178 181 5 0.888889 31 3 0.907347 111 5 0.85085 82 5 0.875528 125 5 0.746032 35 5 0.733333 9 1 0.877068 395 6 0.897186 119 5 0.86839 265 5 0.728571 47 4 0.84916 110 5 0.92282 121 6 0.823810 58 5 0.85894 376 5 0.880944 194 6 0.753917 119 5 0.736111 51 4 0.86670 147 5 0.911606 144 6 0.873776 161 6 0.93141 248 5 0.5897824 189 6 0.4510345 73 3 0.647237 93 5 0.4552018 147 2 0.547517 123 5 0.77409812 142 6 0.8497826 158 5 0.893244 146 5 0.8323740 165 5 0.94707 165 5 0.8308540 118 5 0.91001 0.817585 0.76759 0.91465 0.957143 0.89164 0.77144 0.811835 0.866389 0.90035 0.89499 0.89198 0.904474 0.85388 0.877095 0.746693 0.789638 0.852667 0.895713 0.84372 0.73452 0.849345 0.91228 0.82011 0.859285 0.859707 0.765425 0.741436 0.86235 0.892530 0.85043 0.91613 0.5866210 0.4599745 0.6292513 0.5168185 0.5532154 0.7196585 0.817508 0.87066 0.801211 0.946244 0.800795 5 0.87254 0.878378 -0.00371433 5 0.85850 0.89101 -0.03250912 0.794538 0.11494852 insignificant 1 1.00000 insignificant 0.58871 0.52063495 insignificant 1 1.00000 insignificant 0.0134290 0.5969283 lowCoverage 1 lowCoverage 0.87254 0.590613 0.287132 5 0.85850 0.602947 0.255556 3.0284e-22 1.0000e+00 hypermethylated 2.5237e-20 1.0000000 hypermethylated 3.9029e-09 1.0000000 hypermethylated 4.3366e-07 1 hypermethylated 0.2807637 1.8353e-03 lowCoverage 7.0589e-02 lowCoverage 0.87254 0.856383 0.0181224 5 0.85850 0.870879 -0.0123766 2.7091e-01 3.4650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8915e-01 7.4613e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0124234 0.65184880 lowCoverage 1.000000 lowCoverage 0.878378 0.590613 0.290951 5 0.89101 0.602947 0.2880652 1.3110e-17 1.0000e+00 hypermethylated 1.0925e-15 1.000000 hypermethylated 1.5437e-07 1.0000000 hypermethylated 1.2864e-05 1 hypermethylated 0.267335 1.9038e-03 lowCoverage 6.0642e-02 lowCoverage 0.87838 0.856383 0.0224938 5 0.89101 0.87088 0.0201325 4.5909e-01 9.7588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2071e-01 9.8306e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0258524 4.0949e-01 insignificant 1.000000 insignificant 0.590613 0.856383 -0.27196603 5 0.602947 0.870879 -0.2679328 1.0000000 2.8832e-09 hypomethylated 1.0000 2.4027e-07 hypomethylated 1.0000000 1.9114e-05 hypomethylated 1 1.5929e-03 hypomethylated -0.293187 1.1648e-03 lowCoverage 6.8519e-02 lowCoverage chr12 104626 105626 112199 IQSEC3 ENSG00000120645 0.852417 167 10 0.739722 89 8 0.731169 72 7 0.83988 58 3 0.815000 64 7 0.83884 150 8 0.627857 56 5 0.77921 59 7 0.759615 63 7 0.880495 74 8 0.79070 255 10 0.833333 41 2 0.836853 147 9 NA 0 0 0.784487 109 8 0.531481 34 3 0.491905 55 6 0.638324 74 4 0.796352 152 9 0.63908 136 9 0.866705 95 9 0.55000 40 4 0.75036 134 9 0.931667 63 4 0.76720 33 4 0.776527 119 9 0.851905 81 4 0.208720 26 2 0.71716 94 7 0.842039 134 9 0.733532 88 8 0.84683 210 10 0.5014954 181 9 0.4579802 147 9 0.687383 205 9 0.3516667 46 4 0.518950 63 6 0.68444225 116 8 0.7915945 134 8 0.795015 169 10 0.8200758 81 6 0.79169 126 10 0.6356734 113 7 0.85442 0.719339 0.71803 0.80069 0.836490 0.80526 0.57345 0.775992 0.747057 0.87040 0.80244 0.83523 0.863392 NA 0.778380 0.455429 0.558550 0.637896 0.816753 0.72648 0.84011 0.680458 0.74738 0.87172 0.800390 0.817432 0.822439 0.432807 0.78958 0.808634 0.72293 0.82409 0.4612928 0.5046112 0.6669752 0.4393939 0.4534681 0.6347775 0.783630 0.76143 0.739899 0.763151 0.585749 2 0.78652 0.794987 -0.01964661 9 0.77251 0.80038 -0.02786969 0.959447 0.22522628 insignificant 1 1.00000 insignificant 0.97666 0.16231857 insignificant 1 1.00000 insignificant 0.0108361 0.8616742 insignificant 1 insignificant 0.78652 0.554090 0.226744 9 0.77251 0.547832 0.224675 8.5743e-16 1.0000e+00 hypermethylated 4.0830e-14 1.0000000 hypermethylated 4.7883e-08 0.9999999 hypermethylated 3.9902e-06 1 hypermethylated 0.2140693 7.9259e-03 weaklyHypermeth 1.8432e-01 insignificant 0.78652 0.772071 0.0251600 9 0.77251 0.777213 -0.0047064 4.7119e-01 6.0413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1279e-01 6.7038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0190880 0.65890944 insignificant 1.000000 insignificant 0.794987 0.554090 0.253187 9 0.80038 0.547832 0.2525443 1.7550e-14 1.0000e+00 hypermethylated 1.0324e-12 1.000000 hypermethylated 8.5019e-08 1.0000000 hypermethylated 7.7290e-06 1 hypermethylated 0.203233 1.9714e-02 weaklyHypermeth 4.3809e-01 insignificant 0.79499 0.772071 0.0440814 9 0.80038 0.77721 0.0231633 1.1650e-01 9.1509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4226e-01 8.9186e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0299241 6.5070e-01 insignificant 1.000000 insignificant 0.554090 0.772071 -0.19601649 9 0.547832 0.777213 -0.2293810 0.9999999 7.3253e-08 weaklyHypometh 1.0000 4.0696e-06 weaklyHypometh 0.9999997 7.3420e-06 weaklyHypometh 1 7.3420e-04 weaklyHypometh -0.233157 5.9953e-03 weaklyHypometh 2.2205e-01 insignificant chr12 104826 105826 112200 IQSEC3 ENSG00000120645 0.852417 167 10 0.739722 89 8 0.731169 72 7 0.83988 58 3 0.815000 64 7 0.83884 150 8 0.627857 56 5 0.77921 59 7 0.759615 63 7 0.880495 74 8 0.79070 255 10 0.833333 41 2 0.836853 147 9 NA 0 0 0.784487 109 8 0.531481 34 3 0.491905 55 6 0.638324 74 4 0.796352 152 9 0.63908 136 9 0.866705 95 9 0.55000 40 4 0.75036 134 9 0.931667 63 4 0.76720 33 4 0.776527 119 9 0.851905 81 4 0.208720 26 2 0.71716 94 7 0.842039 134 9 0.733532 88 8 0.84683 210 10 0.5014954 181 9 0.4579802 147 9 0.687383 205 9 0.3516667 46 4 0.518950 63 6 0.68444225 116 8 0.7915945 134 8 0.795015 169 10 0.8200758 81 6 0.79169 126 10 0.6356734 113 7 0.85442 0.719339 0.71803 0.80069 0.836490 0.80526 0.57345 0.775992 0.747057 0.87040 0.80244 0.83523 0.863392 NA 0.778380 0.455429 0.558550 0.637896 0.816753 0.72648 0.84011 0.680458 0.74738 0.87172 0.800390 0.817432 0.822439 0.432807 0.78958 0.808634 0.72293 0.82409 0.4612928 0.5046112 0.6669752 0.4393939 0.4534681 0.6347775 0.783630 0.76143 0.739899 0.763151 0.585749 2 0.78652 0.794987 -0.01964661 9 0.77251 0.80038 -0.02786969 0.959447 0.22522628 insignificant 1 1.00000 insignificant 0.97666 0.16231857 insignificant 1 1.00000 insignificant 0.0108361 0.8616742 insignificant 1 insignificant 0.78652 0.554090 0.226744 9 0.77251 0.547832 0.224675 8.5743e-16 1.0000e+00 hypermethylated 4.0830e-14 1.0000000 hypermethylated 4.7883e-08 0.9999999 hypermethylated 3.9902e-06 1 hypermethylated 0.2140693 7.9259e-03 weaklyHypermeth 1.8432e-01 insignificant 0.78652 0.772071 0.0251600 9 0.77251 0.777213 -0.0047064 4.7119e-01 6.0413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1279e-01 6.7038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0190880 0.65890944 insignificant 1.000000 insignificant 0.794987 0.554090 0.253187 9 0.80038 0.547832 0.2525443 1.7550e-14 1.0000e+00 hypermethylated 1.0324e-12 1.000000 hypermethylated 8.5019e-08 1.0000000 hypermethylated 7.7290e-06 1 hypermethylated 0.203233 1.9714e-02 weaklyHypermeth 4.3809e-01 insignificant 0.79499 0.772071 0.0440814 9 0.80038 0.77721 0.0231633 1.1650e-01 9.1509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4226e-01 8.9186e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0299241 6.5070e-01 insignificant 1.000000 insignificant 0.554090 0.772071 -0.19601649 9 0.547832 0.777213 -0.2293810 0.9999999 7.3253e-08 weaklyHypometh 1.0000 4.0696e-06 weaklyHypometh 0.9999997 7.3420e-06 weaklyHypometh 1 7.3420e-04 weaklyHypometh -0.233157 5.9953e-03 weaklyHypometh 2.2205e-01 insignificant chr12 151204 152204 112202 IQSEC3 ENSG00000120645 0.905930 110 4 0.749855 121 5 0.741532 196 5 0.55476 102 2 0.765685 116 5 0.76091 155 5 0.743670 167 5 0.74296 111 4 0.746794 133 5 0.824924 121 5 0.81807 130 5 0.752723 151 5 0.457833 128 5 NA 0 0 0.785508 140 5 0.863375 98 4 0.678433 111 4 0.725864 138 4 0.514004 138 5 0.84544 123 4 0.854651 104 5 0.64211 39 2 0.82782 114 5 0.872222 60 4 0.95455 33 2 0.736447 158 5 0.702428 85 5 0.802576 92 5 0.75250 90 5 0.725408 172 5 0.783685 132 5 0.80563 156 4 0.5424958 138 5 0.5273193 120 5 0.267647 71 2 0.8166667 19 1 0.558730 69 4 0.72894394 132 5 0.8054973 123 4 0.779042 95 2 0.8483709 80 2 0.77886 123 4 0.9172642 105 2 0.90903 0.835549 0.65400 0.76419 0.760199 0.85136 0.82166 0.751264 0.716970 0.80434 0.78158 0.77806 0.385349 NA 0.788104 0.795680 0.621978 0.718080 0.625909 0.72116 0.90599 0.657599 0.79807 0.90635 0.933587 0.840219 0.692517 0.766853 0.87484 0.804533 0.80369 0.80761 0.5226704 0.4738774 0.1855708 0.6127745 0.5906283 0.8092753 0.840669 0.79296 0.847844 0.842957 0.826026 2 0.74970 0.801619 -0.04808511 5 0.74004 0.77146 -0.03141448 0.950385 0.08755031 insignificant 1 1.00000 insignificant 0.96935 0.15841382 insignificant 1 1.00000 insignificant -0.0526356 0.1537421 lowCoverage 1 lowCoverage 0.74970 0.590164 0.170807 5 0.74004 0.539439 0.200605 7.9924e-08 1.0000e+00 weaklyHypermeth 1.7375e-06 1.0000000 weaklyHypermeth 9.1873e-04 0.9995691 weaklyHypermeth 1.9972e-02 1 weaklyHypermeth 0.1620648 9.3508e-02 lowCoverage 1.0000e+00 lowCoverage 0.74970 0.817490 -0.0807555 2 0.74004 0.825506 -0.0854610 9.8339e-01 1.6461e-02 lowCoverage 1.0000e+00 9.8112e-01 lowCoverage 9.5303e-01 2.0611e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0901084 0.03040393 lowCoverage 0.950123 lowCoverage 0.801619 0.590164 0.211260 5 0.77146 0.539439 0.2320199 7.9487e-10 1.0000e+00 hypermethylated 2.5641e-08 1.000000 hypermethylated 2.8405e-05 0.9997337 hypermethylated 1.1362e-03 1 hypermethylated 0.214700 3.8320e-02 lowCoverage 7.0962e-01 lowCoverage 0.80162 0.817490 -0.0201280 2 0.77146 0.82551 -0.0540465 9.6970e-01 4.5462e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6770e-01 4.9592e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0374728 3.1638e-01 lowCoverage 1.000000 lowCoverage 0.590164 0.817490 -0.22372276 2 0.539439 0.825506 -0.2860664 0.9999999 3.2864e-07 lowCoverage 1.0000 1.5650e-05 lowCoverage 0.9999976 4.4542e-04 lowCoverage 1 2.1186e-02 lowCoverage -0.252173 2.1096e-02 lowCoverage 5.2739e-01 lowCoverage chr12 343053 344053 112205 SLC6A13 ENSG00000010379 0.660243 98 7 0.592308 129 8 0.832532 54 4 0.74861 59 7 0.575000 55 7 0.78881 241 9 0.722849 130 9 0.56886 116 7 0.784091 115 4 0.629286 88 9 0.70254 156 7 0.673591 64 4 0.722321 74 6 0.77009 44 4 0.536979 58 4 0.779985 67 4 0.397969 81 4 0.728017 59 7 0.623626 59 7 0.76707 209 9 0.524802 52 4 0.62361 35 5 0.59610 75 4 0.574074 40 3 0.81100 59 5 0.729048 144 9 0.610159 64 4 0.585119 66 4 0.62160 70 7 0.621970 127 9 0.631842 107 7 0.63799 257 7 0.5572125 95 7 0.4209821 60 7 0.510070 198 7 0.3285714 19 1 0.612299 101 7 0.57412903 95 7 0.6389190 99 7 0.728648 98 7 0.7653620 103 7 0.80357 46 4 0.6513237 94 7 0.80453 0.704706 0.75959 0.79507 0.794702 0.78371 0.71102 0.710295 0.789685 0.65171 0.77388 0.73056 0.739278 0.81989 0.706319 0.806973 0.670330 0.680799 0.747471 0.74625 0.72468 0.540477 0.71709 0.68874 0.761038 0.752318 0.758530 0.792161 0.66387 0.693842 0.68981 0.73224 0.6694861 0.4378666 0.4997138 0.4920530 0.6359472 0.6224486 0.725806 0.77853 0.770988 0.813742 0.779750 3 0.72648 0.697080 0.03635361 7 0.71002 0.65673 0.05329239 0.030835 0.98819739 weaklyHypermeth 1 1.00000 insignificant 0.02377 0.99688987 weaklyHypermeth 1 1.00000 insignificant 0.0496290 0.1341659 insignificant 1 insignificant 0.72648 0.584507 0.134922 7 0.71002 0.583008 0.127014 3.2880e-11 6.6422e-01 weaklyHypermeth 1.0606e-09 1.0000000 weaklyHypermeth 9.2501e-06 0.9978944 weaklyHypermeth 4.0218e-04 1 weaklyHypermeth 0.1796948 6.5032e-03 weaklyHypermeth 1.5977e-01 insignificant 0.70696 0.754545 -0.0313686 7 0.65165 0.684623 -0.0329709 8.9717e-01 1.2265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0551e-01 1.9222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0373259 0.37425498 insignificant 1.000000 insignificant 0.697080 0.584507 0.102806 7 0.65673 0.583008 0.0737215 6.0785e-07 6.7706e-01 weaklyHypermeth 1.3815e-05 1.000000 weaklyHypermeth 1.4743e-03 0.9869557 weaklyHypermeth 3.4287e-02 1 weaklyHypermeth 0.130066 2.9768e-02 weaklyHypermeth 5.9916e-01 insignificant 0.67843 0.754545 -0.0629488 7 0.60213 0.68462 -0.0824959 9.9814e-01 1.5265e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9962e-01 2.3946e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0869549 5.4223e-02 insignificant 1.000000 insignificant 0.578947 0.754545 -0.16094580 7 0.536052 0.684623 -0.1485714 0.9659289 1.0844e-05 weaklyHypometh 1.0000 3.4979e-04 weaklyHypometh 0.9998326 1.2071e-04 weaklyHypometh 1 7.1005e-03 weaklyHypometh -0.217021 3.2784e-03 weaklyHypometh 1.5764e-01 insignificant chr12 2247703 2248703 112254 CACNA1C ENSG00000151067 0.846073 297 8 0.766703 385 7 0.644020 366 8 0.90642 181 7 0.816537 183 7 0.87419 438 8 0.761565 221 7 0.78934 298 8 0.699046 194 8 0.801619 181 6 0.86106 374 8 0.747256 144 6 0.703429 279 8 0.68095 41 3 0.705013 198 8 0.496599 59 5 0.496140 103 5 0.613455 174 7 0.855152 308 7 0.84156 349 8 0.843101 157 8 0.64893 80 6 0.83869 265 8 0.725507 161 7 0.80224 72 5 0.835738 467 8 0.770943 167 8 0.763644 114 8 0.79030 349 7 0.807768 512 8 0.799408 417 8 0.86723 450 8 0.0113151 527 8 0.0036811 256 7 0.111584 372 7 0.0083333 65 5 0.001355 266 8 0.00088889 513 8 0.7493321 264 7 0.745483 262 7 0.7186506 229 7 0.73230 194 6 0.7160627 199 7 0.85164 0.764791 0.69307 0.90981 0.761849 0.86770 0.77891 0.808023 0.776856 0.88609 0.86082 0.71500 0.747730 0.73755 0.760051 0.478261 0.688065 0.556817 0.862235 0.88463 0.88060 0.696827 0.87250 0.87149 0.793048 0.872425 0.786980 0.783526 0.80212 0.835816 0.84180 0.86576 0.0261678 0.0077208 0.1077395 0.0181070 0.0033123 0.0021728 0.779330 0.75507 0.773669 0.713569 0.676112 5 0.80138 0.834113 -0.03848159 8 0.79334 0.81588 -0.02253782 0.918417 0.02671965 weaklyHypometh 1 1.00000 insignificant 0.97222 0.02257640 weaklyHypometh 1 1.00000 insignificant -0.0458186 0.1534585 insignificant 1 insignificant 0.80138 0.038596 0.765716 8 0.79334 0.035496 0.757844 1.9967e-82 1.0000e+00 hypermethylated 9.9836e-80 1.0000000 hypermethylated 2.2105e-22 1.0000000 hypermethylated 1.1052e-19 1 hypermethylated 0.7224465 5.2751e-17 hypermethylated 1.7584e-14 hypermethylated 0.80138 0.713415 0.0665630 7 0.79334 0.716717 0.0766237 1.2294e-02 9.0618e-01 weaklyHypermeth 4.3906e-01 1.0000e+00 insignificant 1.5678e-01 7.7682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0129411 0.63660369 insignificant 1.000000 insignificant 0.833905 0.038539 0.801312 8 0.78078 0.031552 0.7492286 6.3170e-77 1.0000e+00 hypermethylated 3.1585e-74 1.000000 hypermethylated 5.7379e-19 1.0000000 hypermethylated 2.8690e-16 1 hypermethylated 0.768265 7.6462e-14 hypermethylated 2.5487e-11 hypermethylated 0.83411 0.713415 0.1024960 7 0.81588 0.71672 0.0991615 9.6374e-07 9.3717e-01 weaklyHypermeth 7.4134e-05 1.0000e+00 weaklyHypermeth 2.0879e-03 9.5968e-01 weaklyHypermeth 1.1854e-01 1.00000000 insignificant 0.0587597 6.7398e-03 weaklyHypermeth 0.449319 insignificant 0.038596 0.713415 -0.68583754 7 0.035496 0.716717 -0.6812207 1.0000000 3.1560e-40 hypomethylated 1.0000 1.5780e-37 hypomethylated 1.0000000 5.5793e-13 hypomethylated 1 2.7897e-10 hypomethylated -0.709505 1.0608e-08 hypomethylated 5.3039e-06 hypomethylated chr12 2248071 2249071 112255 CACNA1C ENSG00000151067 0.846073 297 8 0.766703 385 7 0.644020 366 8 0.90642 181 7 0.816537 183 7 0.87419 438 8 0.761565 221 7 0.78934 298 8 0.699046 194 8 0.801619 181 6 0.86106 374 8 0.747256 144 6 0.703429 279 8 0.68095 41 3 0.705013 198 8 0.496599 59 5 0.496140 103 5 0.613455 174 7 0.855152 308 7 0.84156 349 8 0.843101 157 8 0.64893 80 6 0.83869 265 8 0.725507 161 7 0.80224 72 5 0.835738 467 8 0.770943 167 8 0.763644 114 8 0.79030 349 7 0.807768 512 8 0.799408 417 8 0.86723 450 8 0.0113151 527 8 0.0036811 256 7 0.111584 372 7 0.0083333 65 5 0.001355 266 8 0.00088889 513 8 0.7493321 264 7 0.745483 262 7 0.7186506 229 7 0.73230 194 6 0.7160627 199 7 0.85164 0.764791 0.69307 0.90981 0.761849 0.86770 0.77891 0.808023 0.776856 0.88609 0.86082 0.71500 0.747730 0.73755 0.760051 0.478261 0.688065 0.556817 0.862235 0.88463 0.88060 0.696827 0.87250 0.87149 0.793048 0.872425 0.786980 0.783526 0.80212 0.835816 0.84180 0.86576 0.0261678 0.0077208 0.1077395 0.0181070 0.0033123 0.0021728 0.779330 0.75507 0.773669 0.713569 0.676112 5 0.80138 0.834113 -0.03848159 8 0.79334 0.81588 -0.02253782 0.918417 0.02671965 weaklyHypometh 1 1.00000 insignificant 0.97222 0.02257640 weaklyHypometh 1 1.00000 insignificant -0.0458186 0.1534585 insignificant 1 insignificant 0.80138 0.038596 0.765716 8 0.79334 0.035496 0.757844 1.9967e-82 1.0000e+00 hypermethylated 9.9836e-80 1.0000000 hypermethylated 2.2105e-22 1.0000000 hypermethylated 1.1052e-19 1 hypermethylated 0.7224465 5.2751e-17 hypermethylated 1.7584e-14 hypermethylated 0.80138 0.713415 0.0665630 7 0.79334 0.716717 0.0766237 1.2294e-02 9.0618e-01 weaklyHypermeth 4.3906e-01 1.0000e+00 insignificant 1.5678e-01 7.7682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0129411 0.63660369 insignificant 1.000000 insignificant 0.833905 0.038539 0.801312 8 0.78078 0.031552 0.7492286 6.3170e-77 1.0000e+00 hypermethylated 3.1585e-74 1.000000 hypermethylated 5.7379e-19 1.0000000 hypermethylated 2.8690e-16 1 hypermethylated 0.768265 7.6462e-14 hypermethylated 2.5487e-11 hypermethylated 0.83411 0.713415 0.1024960 7 0.81588 0.71672 0.0991615 9.6374e-07 9.3717e-01 weaklyHypermeth 7.4134e-05 1.0000e+00 weaklyHypermeth 2.0879e-03 9.5968e-01 weaklyHypermeth 1.1854e-01 1.00000000 insignificant 0.0587597 6.7398e-03 weaklyHypermeth 0.449319 insignificant 0.038596 0.713415 -0.68583754 7 0.035496 0.716717 -0.6812207 1.0000000 3.1560e-40 hypomethylated 1.0000 1.5780e-37 hypomethylated 1.0000000 5.5793e-13 hypomethylated 1 2.7897e-10 hypomethylated -0.709505 1.0608e-08 hypomethylated 5.3039e-06 hypomethylated chr12 2263305 2264305 112256 CACNA1C ENSG00000151067 0.756065 200 5 0.666928 135 5 0.662771 150 5 0.71924 131 5 0.866926 70 5 0.82675 291 5 0.573593 127 5 0.56822 180 5 0.547441 160 5 0.702823 142 5 0.57382 212 5 0.662500 94 5 0.512992 189 5 0.45159 87 4 0.543286 269 5 0.673333 133 5 0.654308 75 4 0.440337 152 5 0.693992 142 5 0.85552 168 5 0.666717 99 5 0.69285 134 5 0.75550 151 5 0.511558 128 5 0.59857 58 4 0.791538 177 5 0.562884 214 6 0.719046 128 5 0.73313 102 5 0.850344 231 5 0.595381 218 5 0.87548 220 5 0.0000000 224 7 0.0000000 109 5 0.000000 204 5 0.0000000 38 2 0.028052 205 5 0.17604167 206 5 0.6917713 165 5 0.538743 164 5 0.6013278 146 5 0.68879 137 5 0.4589025 150 5 0.74123 0.712001 0.75556 0.85414 0.840792 0.91486 0.73245 0.766670 0.762350 0.83100 0.79546 0.79884 0.716219 0.70985 0.752280 0.776289 0.829729 0.396473 0.833447 0.81605 0.75136 0.475158 0.72524 0.71601 0.634021 0.793652 0.665543 0.834619 0.71607 0.839725 0.80985 0.84152 0.0000000 0.0000000 0.0000000 0.0000000 0.0392133 0.0082152 0.775907 0.59414 0.570510 0.610301 0.482791 5 0.76279 0.757527 0.00546538 5 0.59093 0.63091 -0.03997841 0.832593 0.23860698 insignificant 1 1.00000 insignificant 0.54314 0.50623823 insignificant 1 1.00000 insignificant -0.0484617 0.2683332 lowCoverage 1 lowCoverage 0.76279 0.010142 0.752639 5 0.59093 0.016302 0.574627 1.5620e-58 1.0000e+00 hypermethylated 5.2066e-56 1.0000000 hypermethylated 3.3674e-13 0.9999984 hypermethylated 5.6123e-11 1 hypermethylated 0.6136059 1.3697e-10 lowCoverage 3.4241e-08 lowCoverage 0.76279 0.632546 0.1429659 5 0.59093 0.466722 0.1242063 2.3927e-04 9.9993e-01 weaklyHypermeth 1.1963e-02 1.0000e+00 weaklyHypermeth 1.2894e-03 1.0000e+00 weaklyHypermeth 7.1631e-02 1.0000e+00 weaklyHypermeth 0.0517138 0.35486143 lowCoverage 1.000000 lowCoverage 0.757527 0.010142 0.747733 5 0.63091 0.016302 0.6146055 2.9017e-48 1.0000e+00 hypermethylated 7.2543e-46 1.000000 hypermethylated 6.4295e-12 0.9999999 hypermethylated 1.0716e-09 1 hypermethylated 0.662068 1.7201e-10 lowCoverage 4.3003e-08 lowCoverage 0.75753 0.632546 0.1392180 5 0.63091 0.46672 0.1641847 4.9088e-04 9.9958e-01 weaklyHypermeth 2.5836e-02 1.0000e+00 weaklyHypermeth 9.3051e-03 9.9995e-01 weaklyHypermeth 4.0457e-01 1.00000000 insignificant 0.1001755 1.0593e-01 insignificant 1.000000 insignificant 0.010142 0.632546 -0.61673426 5 0.016302 0.466722 -0.4504208 0.9999387 1.0531e-29 hypomethylated 1.0000 3.5103e-27 hypomethylated 0.9999033 2.1358e-07 hypomethylated 1 2.6698e-05 hypomethylated -0.561892 1.4184e-05 lowCoverage 1.9171e-03 lowCoverage chr12 2281692 2282692 112258 CACNA1C ENSG00000151067 0.910789 422 9 0.941994 215 9 0.855062 152 9 0.93207 419 9 0.973765 58 6 0.92991 428 9 0.886477 77 8 0.91963 186 9 0.936141 176 9 0.908633 170 9 0.90550 247 9 0.898316 48 6 0.917067 329 9 0.94576 114 9 0.942119 198 9 0.250000 10 1 0.966667 17 1 0.894888 444 9 0.982353 76 7 0.84366 351 9 0.832772 96 9 0.95582 188 9 0.92594 231 9 0.916779 100 9 0.95696 138 9 0.949056 279 9 0.932413 152 9 0.576471 77 8 0.91492 210 9 0.935846 329 9 0.916876 247 9 0.89110 344 9 0.7958911 276 9 0.6077705 100 9 0.975794 123 3 0.8831019 58 2 0.784574 177 9 0.93214942 275 9 0.9440931 340 9 0.931848 303 9 0.9490431 375 9 0.94597 285 9 0.9318456 334 9 0.90515 0.934791 0.85591 0.92396 0.980415 0.93763 0.86711 0.902823 0.932275 0.90016 0.90544 0.89552 0.923592 0.93174 0.934336 0.562396 0.916204 0.892292 0.976498 0.85110 0.86997 0.958458 0.92372 0.91638 0.951812 0.949197 0.939456 0.601843 0.91341 0.927220 0.92724 0.90017 0.8019774 0.6103340 0.8319275 0.8706797 0.7575327 0.9362129 0.941570 0.93621 0.947093 0.946691 0.936664 2 0.91419 0.915517 -0.00023994 9 0.91472 0.91534 -0.00062059 0.609300 0.60061684 insignificant 1 1.00000 insignificant 0.37180 0.44100601 insignificant 1 1.00000 insignificant -0.0050395 0.9132623 insignificant 1 insignificant 0.91419 0.826561 0.095314 9 0.91472 0.822816 0.091905 5.4461e-09 7.5928e-01 weaklyHypermeth 1.2967e-07 1.0000000 weaklyHypermeth 2.1495e-03 0.9488620 weaklyHypermeth 4.2147e-02 1 weaklyHypermeth 0.0571595 3.9356e-01 insignificant 1.0000e+00 insignificant 0.91419 0.935247 -0.0255853 9 0.91472 0.942015 -0.0272940 9.9066e-01 7.2633e-03 weaklyHypometh 1.0000e+00 6.1328e-01 insignificant 9.6117e-01 4.0640e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0535207 0.13849534 insignificant 1.000000 insignificant 0.915517 0.826561 0.094617 9 0.91534 0.822816 0.0925252 4.1285e-04 8.9646e-01 weaklyHypermeth 7.5064e-03 1.000000 weaklyHypermeth 2.4425e-02 0.8840264 weaklyHypermeth 4.0041e-01 1 insignificant 0.062199 3.4282e-01 insignificant 1.0000e+00 insignificant 0.91552 0.935247 -0.0273320 9 0.91534 0.94201 -0.0266734 9.8374e-01 1.0736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8342e-01 6.8573e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0484811 1.3953e-01 insignificant 1.000000 insignificant 0.826561 0.935247 -0.12193747 9 0.822816 0.942015 -0.1191986 0.9998670 1.4703e-04 weaklyHypometh 1.0000 3.9737e-03 weaklyHypometh 0.9997682 3.9593e-03 weaklyHypometh 1 1.3653e-01 insignificant -0.110680 9.5236e-02 insignificant 1.0000e+00 insignificant chr12 2942862 2943862 112274 TEAD4 ENSG00000197905 0.240100 106 6 0.068474 161 6 0.158574 206 6 0.19505 137 6 0.120139 110 6 0.43709 210 6 0.137597 156 6 0.23878 172 6 0.077077 240 6 0.267014 230 5 0.26570 189 6 0.139248 210 5 0.033985 167 5 0.33699 154 5 0.065938 216 5 0.061905 210 5 0.025000 25 2 0.141654 167 6 0.086109 130 6 0.16614 131 6 0.143519 56 6 0.28055 120 5 0.25993 92 6 0.153229 131 6 0.21355 118 6 0.097752 162 6 0.141636 216 6 0.035481 76 6 0.32297 97 6 0.115366 254 6 0.208162 147 6 0.22689 140 6 0.1656057 140 6 0.3231151 54 3 0.426230 83 3 0.1777778 20 2 0.254821 124 6 0.15492098 141 6 0.5131313 107 6 0.405356 106 6 0.4168143 112 6 0.16817 90 5 0.3944780 98 6 0.14188 0.037016 0.12263 0.14946 0.063504 0.40572 0.10193 0.133971 0.044446 0.17780 0.16722 0.10690 0.042569 0.17889 0.070320 0.084581 0.041832 0.099639 0.069206 0.13446 0.13018 0.281390 0.18920 0.13153 0.169771 0.049746 0.102101 0.038446 0.18005 0.075688 0.13055 0.15336 0.0998629 0.2206358 0.3581582 0.2502545 0.2549256 0.0792049 0.522211 0.45244 0.428846 0.209628 0.405161 3 0.13165 0.158484 -0.00321382 6 0.17486 0.18195 -0.00709560 0.661314 0.42321287 insignificant 1 1.00000 insignificant 0.88449 0.28706933 insignificant 1 1.00000 insignificant -0.0201250 0.5590650 insignificant 1 insignificant 0.13165 0.217082 -0.035076 6 0.17486 0.209588 -0.034730 8.6661e-01 1.8090e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9015e-01 0.0406642 weaklyHypometh 1.0000e+00 1 insignificant -0.0872836 1.1825e-01 lowCoverage 1.0000e+00 lowCoverage 0.13165 0.380117 -0.2554821 6 0.17486 0.393910 -0.2190515 9.7653e-01 4.7043e-17 hypomethylated 1.0000e+00 2.3521e-14 hypomethylated 9.8290e-01 3.8551e-09 hypomethylated 1.0000e+00 1.9275e-06 hypomethylated -0.2164621 0.01464557 weaklyHypometh 0.636764 insignificant 0.158484 0.217082 -0.029120 6 0.18195 0.209588 -0.0276348 7.9782e-01 1.3939e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6565e-01 0.1213687 insignificant 1.0000e+00 1 insignificant -0.067159 2.1595e-01 lowCoverage 1.0000e+00 lowCoverage 0.15848 0.380117 -0.2265744 6 0.18195 0.39391 -0.2119559 9.7238e-01 3.1435e-12 hypomethylated 1.0000e+00 1.5718e-09 hypomethylated 9.8974e-01 3.0160e-06 hypomethylated 1.0000e+00 0.00150798 hypomethylated -0.1963371 2.1615e-02 weaklyHypometh 1.000000 insignificant 0.217082 0.380117 -0.16425080 6 0.209588 0.393910 -0.1843211 0.9472232 4.9649e-05 weaklyHypometh 1.0000 1.5045e-03 weaklyHypometh 0.9433094 4.7876e-03 weaklyHypometh 1 1.4961e-01 insignificant -0.129178 1.1037e-01 lowCoverage 1.0000e+00 lowCoverage chr12 2942979 2943979 112275 TEAD4 ENSG00000197905 0.202406 92 5 0.041143 122 5 0.190289 200 5 0.13406 121 5 0.064167 105 5 0.41022 196 5 0.140116 140 5 0.20082 158 5 0.059160 234 5 0.187083 227 5 0.20160 160 5 0.167098 208 5 0.040781 166 5 0.20439 153 5 0.079126 212 5 0.061905 210 5 0.025000 25 2 0.115440 156 5 0.068330 90 5 0.13270 122 5 0.097222 48 5 0.28055 120 5 0.24942 76 5 0.183874 125 5 0.18796 77 5 0.067303 130 5 0.147741 207 5 0.042578 71 5 0.27645 79 5 0.093541 205 5 0.198182 116 5 0.17662 117 5 0.1284565 103 5 0.3077381 39 2 0.500000 22 2 0.2666667 13 1 0.270071 96 5 0.09625000 112 5 0.5890909 92 5 0.439368 89 5 0.4694079 86 5 0.20181 83 4 0.4041429 72 5 0.13384 0.032303 0.12607 0.13964 0.054069 0.40108 0.10128 0.125712 0.041019 0.16410 0.15547 0.10990 0.043762 0.15587 0.072292 0.077826 0.033879 0.094786 0.066240 0.12889 0.12331 0.281871 0.18574 0.13522 0.164958 0.044131 0.101849 0.039524 0.16952 0.071516 0.12698 0.14425 0.0928119 0.2156069 0.3603863 0.2572710 0.2570664 0.0688571 0.533114 0.45853 0.436556 0.215505 0.406816 3 0.11753 0.134209 -0.00589741 5 0.14548 0.15868 -0.01319868 0.681833 0.32862312 insignificant 1 1.00000 insignificant 0.93384 0.19712367 insignificant 1 1.00000 insignificant -0.0304955 0.3274692 lowCoverage 1 lowCoverage 0.11753 0.176623 -0.044347 5 0.14548 0.190489 -0.045007 8.8175e-01 1.2730e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9673e-01 0.0237570 weaklyHypometh 1.0000e+00 1 insignificant -0.1252387 8.9338e-02 lowCoverage 1.0000e+00 lowCoverage 0.11753 0.417062 -0.3056829 5 0.14548 0.430933 -0.2854514 1.0000e+00 4.8960e-18 hypomethylated 1.0000e+00 4.8960e-15 hypomethylated 1.0000e+00 6.5096e-10 hypomethylated 1.0000e+00 6.5096e-07 hypomethylated -0.2844714 0.00822898 lowCoverage 0.411449 lowCoverage 0.134209 0.176623 -0.036030 5 0.15868 0.190489 -0.0318087 7.6183e-01 1.0791e-01 insignificant 1.0000e+00 1.000000 insignificant 9.5360e-01 0.1000047 insignificant 1.0000e+00 1 insignificant -0.094743 1.8048e-01 lowCoverage 1.0000e+00 lowCoverage 0.13421 0.417062 -0.2973959 5 0.15868 0.43093 -0.2722527 1.0000e+00 4.2017e-13 hypomethylated 1.0000e+00 4.2017e-10 hypomethylated 1.0000e+00 6.8756e-07 hypomethylated 1.0000e+00 0.00068756 hypomethylated -0.2539760 1.2288e-02 lowCoverage 0.722828 lowCoverage 0.176623 0.417062 -0.24963928 5 0.190489 0.430933 -0.2404440 0.9999665 1.2473e-05 hypomethylated 1.0000 3.8977e-04 hypomethylated 0.9999402 1.6285e-03 weaklyHypometh 1 6.5139e-02 weaklyHypometh -0.159233 9.8904e-02 lowCoverage 1.0000e+00 lowCoverage chr12 3012561 3013561 112276 TEAD4 ENSG00000197905 0.910403 432 8 0.826361 281 9 0.895364 415 9 0.87466 290 8 0.819155 220 9 0.83906 523 8 0.907707 280 9 0.85300 299 9 0.909186 213 9 0.888229 271 8 0.90161 391 9 0.944683 187 8 0.857765 269 8 0.74942 140 4 0.884713 304 9 0.982711 110 4 0.554762 44 5 0.828759 653 8 0.888938 274 8 0.82084 340 8 0.860864 136 7 0.56230 165 8 0.86380 224 7 0.692646 219 8 0.92989 187 7 0.898607 336 9 0.844874 291 9 0.842200 145 9 0.78061 259 7 0.890057 348 9 0.823436 310 9 0.82383 590 8 0.6282716 185 9 0.9078522 321 8 0.857759 260 7 0.5920139 80 5 0.665819 179 9 0.74105260 371 9 0.8056135 271 8 0.828860 344 8 0.7749179 423 8 0.77570 365 8 0.8708989 305 8 0.87478 0.813792 0.77963 0.88279 0.817330 0.86196 0.88249 0.811916 0.849897 0.86657 0.89083 0.82330 0.790146 0.80773 0.844183 0.956762 0.455132 0.749523 0.813783 0.86954 0.78657 0.544603 0.79669 0.82463 0.859904 0.873163 0.818579 0.804815 0.81207 0.833593 0.74582 0.88362 0.6075708 0.8748862 0.6329266 0.4275949 0.7111810 0.6227645 0.720482 0.71590 0.691816 0.706765 0.792843 7 0.84522 0.834373 0.01311508 9 0.83072 0.77643 0.05428862 0.489440 0.72526825 insignificant 1 1.00000 insignificant 0.35694 0.92033566 insignificant 1 1.00000 insignificant 0.0391071 0.2780456 insignificant 1 insignificant 0.84541 0.727011 0.120774 8 0.88072 0.784977 0.095738 5.5622e-08 9.3937e-01 weaklyHypermeth 1.2361e-06 1.0000000 weaklyHypermeth 7.5659e-03 0.8937217 weaklyHypermeth 1.3274e-01 1 insignificant 0.1247386 6.3148e-02 insignificant 1.0000e+00 insignificant 0.84533 0.799180 0.0751803 8 0.86746 0.820522 0.0469394 4.9743e-05 8.9971e-01 weaklyHypermeth 2.9261e-03 1.0000e+00 weaklyHypermeth 1.6341e-03 9.7623e-01 weaklyHypermeth 8.2562e-02 1.0000e+00 weaklyHypermeth 0.0456679 0.10708030 insignificant 1.000000 insignificant 0.834216 0.725968 0.108930 8 0.76645 0.713615 0.0528331 5.9313e-03 9.3866e-01 weaklyHypermeth 9.1251e-02 1.000000 weaklyHypermeth 1.0863e-01 0.8338518 insignificant 1.0000e+00 1 insignificant 0.085632 1.8846e-01 insignificant 1.0000e+00 insignificant 0.83463 0.799180 0.0698025 8 0.86270 0.82052 0.0421743 1.2450e-02 9.4835e-01 weaklyHypermeth 4.6110e-01 1.0000e+00 insignificant 1.6784e-02 8.9131e-01 weaklyHypermeth 6.9932e-01 1.00000000 insignificant 0.0065608 8.5064e-01 insignificant 1.000000 insignificant 0.726815 0.799180 -0.03329924 8 0.761085 0.820522 -0.0594366 0.7731231 1.3353e-02 weaklyHypometh 1.0000 2.3845e-01 insignificant 0.6748209 1.9512e-01 insignificant 1 1.0000e+00 insignificant -0.079071 2.0052e-01 insignificant 1.0000e+00 insignificant chr12 3969396 3970396 112310 PARP11 ENSG00000111224 0.832453 180 5 0.705597 150 7 0.792387 170 7 0.47445 185 3 0.612392 111 7 0.82019 206 7 0.728703 197 4 0.72490 147 7 0.679788 129 7 0.803435 123 6 0.77849 171 7 0.626162 94 4 0.813599 199 7 0.71053 38 2 0.558489 180 5 0.574739 89 4 0.657596 47 4 0.668307 205 3 0.883917 100 6 0.55243 161 6 0.853486 82 7 0.26224 64 3 0.62783 117 4 0.823529 75 5 0.89524 48 2 0.775627 118 6 0.699197 116 5 0.840136 51 3 0.72975 121 3 0.711224 150 7 0.851697 91 6 0.82112 202 7 0.3813824 188 7 0.3800178 132 6 0.615598 102 4 0.5472222 21 2 0.483326 80 5 0.28026144 157 6 0.1899755 237 3 0.185791 237 6 0.2290919 236 3 0.27317 227 2 0.4645930 194 3 0.78562 0.745151 0.85562 0.61268 0.748889 0.70047 0.79677 0.681497 0.750946 0.81867 0.71638 0.65787 0.872292 0.72189 0.743012 0.848358 0.830522 0.696486 0.916921 0.56838 0.90388 0.395604 0.71553 0.73723 0.763038 0.795914 0.759386 0.853051 0.77870 0.753520 0.86744 0.80021 0.5702267 0.5531257 0.7115323 0.5977531 0.5298347 0.1049785 0.143629 0.21112 0.214001 0.339139 0.352478 2 0.74427 0.767611 -0.02946623 6 0.72785 0.76723 -0.03937794 0.979689 0.07778286 insignificant 1 1.00000 insignificant 0.99356 0.02508302 weaklyHypometh 1 1.00000 insignificant -0.0409954 0.4656128 lowCoverage 1 lowCoverage 0.74427 0.389706 0.319176 6 0.72785 0.397780 0.330075 3.2682e-19 1.0000e+00 hypermethylated 2.0817e-17 1.0000000 hypermethylated 5.1488e-06 0.9999186 hypermethylated 2.5744e-04 1 hypermethylated 0.2519594 2.3500e-03 weaklyHypermeth 8.3794e-02 weaklyHypermeth 0.74427 0.231653 0.4958307 3 0.72785 0.281589 0.4462656 8.2097e-33 1.0000e+00 lowCoverage 8.2097e-30 1.0000e+00 lowCoverage 6.5643e-10 1.0000e+00 lowCoverage 6.5643e-07 1.0000e+00 lowCoverage 0.4314028 0.00028464 lowCoverage 0.047441 lowCoverage 0.767611 0.389706 0.357915 6 0.76723 0.397780 0.3694528 9.2884e-17 1.0000e+00 hypermethylated 6.6346e-15 1.000000 hypermethylated 4.0440e-06 0.9999461 hypermethylated 2.2008e-04 1 hypermethylated 0.292955 1.0383e-03 lowCoverage 3.9934e-02 lowCoverage 0.76761 0.231653 0.5171719 3 0.76723 0.28159 0.4856435 1.7897e-26 1.0000e+00 lowCoverage 1.7897e-23 1.0000e+00 lowCoverage 4.6515e-10 1.0000e+00 lowCoverage 4.6515e-07 1.00000000 lowCoverage 0.4723983 3.3436e-05 lowCoverage 0.016718 lowCoverage 0.389706 0.231653 0.17547966 3 0.397780 0.281589 0.1161907 0.0192835 9.5490e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage 0.0022015 9.5039e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.179443 3.4909e-02 lowCoverage 7.4275e-01 lowCoverage chr12 4161067 4162067 112322 PARP11 ENSG00000111224 0.819049 348 13 0.695864 287 11 0.772035 288 13 0.82501 275 13 0.741698 155 14 0.82368 583 14 0.755040 188 12 0.81692 343 13 0.669502 234 13 0.777312 252 13 0.62331 482 13 0.718016 156 12 0.891799 249 13 0.79744 99 8 0.791912 237 13 0.627109 123 8 0.695498 485 7 0.836095 300 13 0.775874 192 13 0.80567 523 13 0.757200 96 9 0.68824 187 13 0.84003 272 13 0.797447 180 14 0.75518 115 12 0.768372 360 15 0.771177 211 13 0.648366 71 6 0.72742 211 11 0.807384 317 13 0.765837 291 13 0.73442 550 13 0.7419079 210 11 0.5744959 180 10 0.598894 317 13 0.8291227 100 5 0.780661 175 13 0.78407655 329 13 0.8412386 332 13 0.872703 353 13 0.8191025 278 13 0.79869 267 8 0.8298493 350 13 0.77900 0.701203 0.75390 0.79655 0.792753 0.78095 0.76629 0.753801 0.712311 0.79027 0.80803 0.75064 0.833396 0.79208 0.791565 0.730880 0.791801 0.777872 0.774454 0.81556 0.81290 0.718689 0.80878 0.74027 0.746963 0.796116 0.760546 0.754964 0.75319 0.817562 0.77869 0.74776 0.7115542 0.6067280 0.6143815 0.8595555 0.7503164 0.7215797 0.808362 0.82203 0.835382 0.801998 0.812550 6 0.78858 0.790486 0.00374915 13 0.78296 0.75358 0.02937777 0.744450 0.83658140 insignificant 1 1.00000 insignificant 0.56932 0.98013657 insignificant 1 1.00000 insignificant 0.0078516 0.7228325 insignificant 1 insignificant 0.78854 0.678108 0.107667 13 0.76310 0.694253 0.068844 1.2807e-09 9.3520e-01 weaklyHypermeth 3.1236e-08 1.0000000 weaklyHypermeth 1.1324e-04 0.8693146 weaklyHypermeth 3.3306e-03 1 weaklyHypermeth 0.0447486 3.6664e-01 insignificant 1.0000e+00 insignificant 0.78854 0.845570 -0.0390700 13 0.76310 0.826641 -0.0635442 9.9773e-01 3.8465e-04 weaklyHypometh 1.0000e+00 4.8082e-02 weaklyHypometh 9.9976e-01 5.6336e-03 weaklyHypometh 1.0000e+00 5.2073e-01 insignificant -0.0693756 0.00295896 weaklyHypometh 0.184935 insignificant 0.790543 0.678108 0.101855 13 0.76988 0.694253 0.0756243 2.0429e-07 9.7651e-01 weaklyHypermeth 4.8641e-06 1.000000 weaklyHypermeth 1.9713e-03 0.8636110 weaklyHypermeth 4.3806e-02 1 weaklyHypermeth 0.036897 4.4923e-01 insignificant 1.0000e+00 insignificant 0.79054 0.845570 -0.0450058 13 0.76988 0.82664 -0.0567636 9.9996e-01 1.9704e-03 weaklyHypometh 1.0000e+00 4.9260e-01 insignificant 1.0000e+00 1.7981e-03 weaklyHypometh 1.0000e+00 0.35961086 insignificant -0.0772272 1.3857e-03 weaklyHypometh 0.197956 insignificant 0.678108 0.845570 -0.13375618 13 0.694253 0.826641 -0.1323879 0.9999454 2.8040e-06 weaklyHypometh 1.0000 1.0014e-04 weaklyHypometh 0.9993197 1.2026e-04 weaklyHypometh 1 7.1005e-03 weaklyHypometh -0.114124 4.5397e-02 weaklyHypometh 9.4577e-01 insignificant chr12 4371406 4372406 112325 FGF23 ENSG00000118972 0.857373 343 10 0.758794 300 10 0.659916 185 7 0.89547 329 8 0.792436 134 6 0.84303 329 10 0.666662 214 6 0.86751 252 10 0.782552 230 10 0.884459 176 7 0.87523 357 10 0.853576 138 6 0.898686 319 10 0.91667 51 4 0.817282 250 10 0.775486 96 5 0.784828 62 3 0.691358 353 10 0.892444 207 10 0.86222 261 9 0.927959 117 10 0.79046 161 8 0.80773 183 10 0.767253 91 7 0.69785 104 8 0.909518 327 10 0.721333 164 10 0.733333 56 6 0.88216 247 10 0.900613 325 10 0.880010 258 10 0.91846 347 10 0.3602158 268 10 0.2959473 207 10 0.527778 67 4 0.3533333 29 4 0.459667 174 9 0.46835785 332 10 0.8249971 156 9 0.883297 238 9 0.8419485 223 8 0.78095 130 7 0.8644657 186 8 0.92194 0.807387 0.77105 0.89600 0.831576 0.86036 0.75595 0.853915 0.764706 0.87504 0.88979 0.81991 0.893282 0.89767 0.774028 0.773494 0.725715 0.854736 0.870798 0.91902 0.91063 0.794048 0.75556 0.83238 0.798736 0.924316 0.756305 0.816499 0.83372 0.932096 0.90332 0.90425 0.3231080 0.2790968 0.5398828 0.3991968 0.4827027 0.6665434 0.821526 0.90423 0.893144 0.726095 0.895266 4 0.83428 0.858764 -0.02822947 10 0.83113 0.86018 -0.02905364 0.994300 0.06686569 insignificant 1 1.00000 insignificant 0.98344 0.11652750 insignificant 1 1.00000 insignificant -0.0092581 0.7604205 insignificant 1 insignificant 0.83428 0.403900 0.425631 10 0.83113 0.404489 0.426642 1.1146e-48 1.0000e+00 hypermethylated 1.5923e-46 1.0000000 hypermethylated 2.8032e-16 1.0000000 hypermethylated 7.0079e-14 1 hypermethylated 0.4079161 1.0817e-05 hypermethylated 9.0144e-04 hypermethylated 0.83428 0.827438 -0.0060888 8 0.83113 0.850296 -0.0191646 8.3712e-01 1.4759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6437e-01 2.5372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0203328 0.42637721 insignificant 1.000000 insignificant 0.858764 0.403900 0.456307 10 0.86018 0.404489 0.4556956 7.8071e-38 1.0000e+00 hypermethylated 1.3012e-35 1.000000 hypermethylated 1.7067e-14 1.0000000 hypermethylated 4.2667e-12 1 hypermethylated 0.417174 2.6815e-06 hypermethylated 2.6815e-04 hypermethylated 0.85876 0.827438 0.0183107 8 0.86018 0.85030 0.0098890 3.0904e-01 7.3061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2253e-01 7.0027e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0110746 7.1793e-01 insignificant 1.000000 insignificant 0.403900 0.827438 -0.44267611 8 0.404489 0.850296 -0.4458066 1.0000000 2.5261e-22 hypomethylated 1.0000 3.6087e-20 hypomethylated 1.0000000 1.6572e-10 hypomethylated 1 4.1430e-08 hypomethylated -0.428249 1.1101e-05 hypomethylated 1.8502e-03 hypomethylated chr12 4371575 4372575 112326 FGF23 ENSG00000118972 0.857373 343 10 0.758794 300 10 0.659916 185 7 0.89547 329 8 0.792436 134 6 0.84303 329 10 0.666662 214 6 0.86751 252 10 0.782552 230 10 0.884459 176 7 0.87523 357 10 0.853576 138 6 0.898686 319 10 0.91667 51 4 0.817282 250 10 0.775486 96 5 0.784828 62 3 0.691358 353 10 0.892444 207 10 0.86222 261 9 0.927959 117 10 0.79046 161 8 0.80773 183 10 0.767253 91 7 0.69785 104 8 0.909518 327 10 0.721333 164 10 0.733333 56 6 0.88216 247 10 0.900613 325 10 0.880010 258 10 0.91846 347 10 0.3602158 268 10 0.2959473 207 10 0.527778 67 4 0.3533333 29 4 0.459667 174 9 0.46835785 332 10 0.8249971 156 9 0.883297 238 9 0.8419485 223 8 0.78095 130 7 0.8644657 186 8 0.92194 0.807387 0.77105 0.89600 0.831576 0.86036 0.75595 0.853915 0.764706 0.87504 0.88979 0.81991 0.893282 0.89767 0.774028 0.773494 0.725715 0.854736 0.870798 0.91902 0.91063 0.794048 0.75556 0.83238 0.798736 0.924316 0.756305 0.816499 0.83372 0.932096 0.90332 0.90425 0.3231080 0.2790968 0.5398828 0.3991968 0.4827027 0.6665434 0.821526 0.90423 0.893144 0.726095 0.895266 4 0.83428 0.858764 -0.02822947 10 0.83113 0.86018 -0.02905364 0.994300 0.06686569 insignificant 1 1.00000 insignificant 0.98344 0.11652750 insignificant 1 1.00000 insignificant -0.0092581 0.7604205 insignificant 1 insignificant 0.83428 0.403900 0.425631 10 0.83113 0.404489 0.426642 1.1146e-48 1.0000e+00 hypermethylated 1.5923e-46 1.0000000 hypermethylated 2.8032e-16 1.0000000 hypermethylated 7.0079e-14 1 hypermethylated 0.4079161 1.0817e-05 hypermethylated 9.0144e-04 hypermethylated 0.83428 0.827438 -0.0060888 8 0.83113 0.850296 -0.0191646 8.3712e-01 1.4759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6437e-01 2.5372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0203328 0.42637721 insignificant 1.000000 insignificant 0.858764 0.403900 0.456307 10 0.86018 0.404489 0.4556956 7.8071e-38 1.0000e+00 hypermethylated 1.3012e-35 1.000000 hypermethylated 1.7067e-14 1.0000000 hypermethylated 4.2667e-12 1 hypermethylated 0.417174 2.6815e-06 hypermethylated 2.6815e-04 hypermethylated 0.85876 0.827438 0.0183107 8 0.86018 0.85030 0.0098890 3.0904e-01 7.3061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2253e-01 7.0027e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0110746 7.1793e-01 insignificant 1.000000 insignificant 0.403900 0.827438 -0.44267611 8 0.404489 0.850296 -0.4458066 1.0000000 2.5261e-22 hypomethylated 1.0000 3.6087e-20 hypomethylated 1.0000000 1.6572e-10 hypomethylated 1 4.1430e-08 hypomethylated -0.428249 1.1101e-05 hypomethylated 1.8502e-03 hypomethylated chr12 5312152 5313152 112365 KCNA5 ENSG00000130037 0.697778 38 5 0.765128 70 3 0.666667 7 0 0.53000 26 1 NA 0 0 0.65198 47 5 0.666667 3 0 0.97500 51 5 1.000000 3 0 1.000000 1 0 0.87998 105 5 0.500000 2 0 0.916667 20 1 0.90000 9 0 1.000000 6 0 NA 0 0 1.000000 1 0 0.966667 29 1 0.980952 25 1 0.86364 18 1 0.933333 16 0 1.00000 8 0 1.00000 8 0 0.596190 31 5 0.74702 78 5 0.903500 111 5 1.000000 27 4 0.000000 1 0 0.83000 36 5 0.923077 114 5 0.987923 91 5 0.66462 33 5 0.2488636 121 5 0.3433333 47 5 0.734615 72 5 0.4800000 29 4 0.445833 42 5 0.79848485 69 5 0.6321429 39 5 0.923333 32 1 0.7473684 39 5 1.00000 5 1 0.8150000 26 3 0.88889 0.942308 0.33333 0.90000 NA 0.77778 0.66667 0.875000 1.000000 1.00000 0.80556 0.50000 1.000000 1.00000 1.000000 NA 1.000000 0.833333 0.904762 0.81818 1.00000 NA NA 1.00000 0.857143 0.980000 1.000000 0.000000 0.75000 0.948718 0.92754 0.92308 0.5625000 0.4666667 0.6730769 0.4000000 0.5625000 0.6590909 0.625000 0.95000 0.736842 1.000000 0.875000 0 0.83948 0.894928 -0.05613406 1 0.82816 0.87779 -0.04963202 0.983771 0.05662981 lowCoverage 1 1.00000 lowCoverage 0.84532 0.37963920 lowCoverage 1 1.00000 lowCoverage 0.0323686 0.7295728 lowCoverage 1 lowCoverage 0.83948 0.481579 0.352805 1 0.82816 0.429667 0.398495 2.6172e-12 1.0000e+00 lowCoverage 9.6933e-11 1.0000000 lowCoverage 2.6188e-05 0.9999989 lowCoverage 9.6991e-04 1 lowCoverage 0.3226521 1.2252e-02 lowCoverage 2.6068e-01 lowCoverage 0.83948 0.780142 0.0599731 1 0.82816 0.757619 0.0705433 1.4492e-01 8.3865e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5534e-01 8.7293e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0076049 0.92317396 lowCoverage 1.000000 lowCoverage 0.894928 0.481579 0.408969 5 0.87779 0.429667 0.4481271 2.4673e-14 1.0000e+00 hypermethylated 1.3707e-12 1.000000 hypermethylated 2.5591e-05 0.9999640 hypermethylated 1.0663e-03 1 hypermethylated 0.290283 3.2185e-02 lowCoverage 6.3109e-01 lowCoverage 0.89493 0.780142 0.1128573 1 0.87779 0.75762 0.1201753 1.9712e-03 9.8460e-01 lowCoverage 8.5705e-02 1.0000e+00 lowCoverage 3.5367e-02 9.7422e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0247637 8.1689e-01 lowCoverage 1.000000 lowCoverage 0.481579 0.780142 -0.30124947 1 0.429667 0.757619 -0.3279519 0.9999862 5.3184e-05 lowCoverage 1.0000 1.5642e-03 lowCoverage 0.9999344 2.3559e-03 lowCoverage 1 8.7257e-02 lowCoverage -0.315047 1.8995e-02 lowCoverage 4.9698e-01 lowCoverage chr12 5840439 5841439 112394 NTF3 ENSG00000185652 0.835000 26 3 0.859543 86 5 0.762745 85 5 1.00000 4 0 0.961616 58 5 0.98333 36 2 0.878517 86 5 0.90960 51 5 0.849351 39 5 0.940278 58 5 0.88401 110 5 0.925588 88 5 0.896315 103 5 NA 0 0 0.927663 83 5 0.929500 132 5 0.906566 75 5 0.950000 24 1 0.923746 75 5 0.91212 34 2 0.883550 36 5 NA 0 0 0.98182 63 5 1.000000 25 3 NA 0 0 0.855714 51 5 0.980000 34 5 0.987500 47 5 0.86173 51 5 0.897106 56 5 0.912778 64 5 0.89436 53 5 0.7866667 60 5 0.7328640 109 5 0.982143 57 4 1.0000000 8 0 0.780952 24 2 0.86647059 55 5 0.8354622 47 5 0.947009 45 5 0.8750000 16 0 1.00000 21 1 0.7500000 4 0 0.79375 0.877060 0.79167 1.00000 0.965909 0.97917 0.90767 0.949495 0.883117 0.94097 0.85502 0.93824 0.903002 NA 0.942188 0.927500 0.910985 0.937500 0.923913 0.95833 0.85444 NA 0.97727 1.00000 NA 0.844643 0.975000 0.984375 0.87128 0.942810 0.92222 0.91340 0.8666667 0.8803657 0.9821429 1.0000000 0.8333333 0.8955882 0.819328 0.93376 0.875000 1.000000 0.750000 0 0.88986 0.912500 -0.02201874 5 0.89719 0.91886 -0.02167270 0.939809 0.08038981 insignificant 1 1.00000 insignificant 0.95861 0.14481869 insignificant 1 1.00000 insignificant -0.0183238 0.4108568 lowCoverage 1 lowCoverage 0.88986 0.805112 0.088418 5 0.89719 0.798229 0.098960 1.5862e-04 4.6260e-01 weaklyHypermeth 2.7828e-03 1.0000000 weaklyHypermeth 7.6317e-02 0.5545541 insignificant 1.0000e+00 1 insignificant 0.0489485 3.4211e-01 lowCoverage 1.0000e+00 lowCoverage 0.88986 0.887218 0.0080754 3 0.89719 0.901531 -0.0043421 5.7435e-01 4.2538e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9334e-01 2.6906e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0256371 0.59720872 lowCoverage 1.000000 lowCoverage 0.912500 0.805112 0.136318 5 0.91886 0.798229 0.1206324 8.0044e-04 8.5419e-01 weaklyHypermeth 1.4043e-02 1.000000 weaklyHypermeth 3.3290e-02 0.8317976 weaklyHypermeth 5.2016e-01 1 insignificant 0.067272 2.1414e-01 lowCoverage 1.0000e+00 lowCoverage 0.91250 0.887218 0.0305630 3 0.91886 0.90153 0.0173306 2.1108e-01 8.0688e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.1165e-01 7.1741e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0439609 3.8908e-01 lowCoverage 1.000000 lowCoverage 0.805112 0.887218 -0.06645476 3 0.798229 0.901531 -0.1033018 0.7496684 1.4174e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage 0.7730373 2.6540e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.023311 7.1989e-01 lowCoverage 1.0000e+00 lowCoverage chr12 6530361 6531361 112402 GAPDH ENSG00000111640 0.911478 299 11 0.880516 433 11 0.876037 296 10 0.94224 267 8 0.891975 186 10 0.88920 308 9 0.766429 183 8 0.93391 315 10 0.871569 235 10 0.795805 239 10 0.89711 497 13 0.763573 142 8 0.959463 304 10 0.97727 39 3 0.932162 191 10 0.822534 81 5 0.793729 93 5 0.703866 267 8 0.795003 349 10 0.94175 361 9 0.965970 202 10 0.68369 117 4 0.91658 209 10 0.846588 130 10 0.99500 84 4 0.944628 520 10 0.859892 167 10 0.796104 87 6 0.89609 344 10 0.952552 591 10 0.926950 488 10 0.86452 477 10 0.0176124 487 10 0.0483073 300 10 0.396801 310 8 0.9725714 98 7 0.313166 305 13 0.67771017 458 10 0.8859682 137 9 0.952665 296 9 0.9199621 188 5 0.94352 82 5 0.8692680 141 7 0.89595 0.872702 0.84722 0.92911 0.872625 0.85779 0.66662 0.903169 0.840936 0.86085 0.86153 0.78713 0.964632 0.92282 0.909760 0.836847 0.891410 0.855314 0.945689 0.91829 0.95315 0.828889 0.88380 0.86078 0.977826 0.919765 0.855788 0.828981 0.87245 0.933431 0.92777 0.89518 0.0286835 0.0593950 0.4735502 0.9393634 0.1592255 0.7607061 0.915105 0.93895 0.900586 0.925417 0.868660 3 0.89007 0.920082 -0.02949845 10 0.76999 0.88925 -0.11926149 0.999900 0.02069370 weaklyHypometh 1 1.00000 insignificant 0.99638 0.12016789 insignificant 1 1.00000 insignificant -0.0200992 0.5100323 insignificant 1 insignificant 0.89024 0.311191 0.577153 10 0.82499 0.384491 0.440502 7.7893e-50 1.0000e+00 hypermethylated 1.5579e-47 1.0000000 hypermethylated 1.3708e-10 0.9999999 hypermethylated 1.7135e-08 1 hypermethylated 0.4629199 2.7505e-02 weaklyHypermeth 5.3932e-01 insignificant 0.89059 0.918246 -0.0288076 8 0.88845 0.928275 -0.0398207 8.7705e-01 3.2476e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9954e-01 5.7280e-03 weaklyHypometh 1.0000e+00 5.2073e-01 insignificant -0.0469951 0.06431609 insignificant 1.000000 insignificant 0.920598 0.311191 0.609195 10 0.92896 0.384491 0.5444722 6.2185e-35 1.0000e+00 hypermethylated 8.8836e-33 1.000000 hypermethylated 1.7551e-10 1.0000000 hypermethylated 2.5073e-08 1 hypermethylated 0.483019 2.3324e-02 weaklyHypermeth 4.9626e-01 insignificant 0.92057 0.918246 -0.0015187 8 0.92350 0.92827 -0.0047754 4.1113e-01 2.7336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9301e-01 8.1920e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0268959 3.7623e-01 insignificant 1.000000 insignificant 0.310838 0.918246 -0.56475567 8 0.337145 0.928275 -0.5911300 1.0000000 5.5896e-15 hypomethylated 1.0000 6.2106e-13 hypomethylated 1.0000000 6.9910e-08 hypomethylated 1 1.1652e-05 hypomethylated -0.509915 1.9382e-02 weaklyHypometh 4.9698e-01 insignificant chr12 6585018 6586018 112406 SCARNA11 ENSG00000212566 0.046609 199 4 0.157025 134 7 0.048663 91 7 0.11703 205 7 0.025641 104 7 0.32752 189 7 0.133891 130 7 0.12802 144 7 0.103373 149 9 0.097271 120 5 0.12211 152 9 0.074775 94 5 0.093056 79 5 0.14583 90 5 0.219343 98 5 0.087179 60 5 0.250000 26 1 0.093619 205 3 0.014706 74 4 0.24445 110 4 0.042028 93 7 0.00000 78 4 0.30582 80 6 0.018018 68 4 0.15802 185 7 0.060528 203 10 0.068694 165 7 0.036465 70 3 0.14986 67 5 0.028820 175 10 0.071335 180 10 0.13551 209 6 0.0065359 152 7 0.1111111 84 7 0.100000 125 5 0.0370301 334 7 0.035444 145 10 0.00390492 286 8 0.0095486 191 6 0.068531 190 7 0.0035842 172 3 0.13793 197 3 0.0084663 176 4 0.14216 0.162338 0.11432 0.12407 0.034014 0.37534 0.10995 0.087364 0.078893 0.14572 0.29169 0.07984 0.044828 0.10724 0.043347 0.067155 NA 0.151257 0.000000 0.12855 0.18872 0.000000 0.33204 0.11583 0.095832 0.059213 0.030765 0.109544 0.16164 0.083916 0.13125 0.17605 0.0024010 0.0000000 0.0000000 0.0246535 0.0312196 0.0220886 0.040391 0.02551 0.023041 0.046329 0.040474 1 0.11878 0.094148 0.01907012 9 0.16693 0.10414 0.06279803 0.461853 0.99999876 insignificant 1 1.00000 insignificant 0.59390 0.99968679 insignificant 1 1.00000 insignificant 0.0369140 0.2398941 insignificant 1 insignificant 0.11815 0.022222 0.082281 7 0.11142 0.098865 0.012558 9.9770e-04 9.9974e-01 weaklyHypermeth 1.6628e-02 1.0000000 weaklyHypermeth 9.5355e-03 0.9988164 weaklyHypermeth 1.5893e-01 1 insignificant 0.0775015 9.3656e-03 weaklyHypermeth 2.0812e-01 insignificant 0.11777 0.022752 0.0859223 3 0.10035 0.047217 0.0531341 8.1591e-03 9.9995e-01 lowCoverage 3.5474e-01 1.0000e+00 lowCoverage 2.7400e-02 9.9938e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0808935 0.03248238 lowCoverage 0.984315 lowCoverage 0.094569 0.022242 0.051353 8 0.12864 0.104681 0.0239578 1.0109e-01 9.9978e-01 insignificant 1.0000e+00 1.000000 insignificant 2.4291e-01 0.9999520 insignificant 1.0000e+00 1 insignificant 0.040588 2.1022e-01 insignificant 1.0000e+00 insignificant 0.09533 0.023835 0.0727961 3 0.19918 0.10972 0.0894617 8.6771e-02 9.6648e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.7361e-01 9.9955e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0439795 2.4527e-01 lowCoverage 1.000000 lowCoverage 0.021390 0.022752 -0.00998116 3 0.048723 0.047217 0.0015065 0.9792926 7.3894e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage 0.9947414 9.2875e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.003392 9.1851e-01 lowCoverage 1.0000e+00 lowCoverage chr12 6651650 6652650 112412 ENSG00000219410 0.924792 163 5 0.747222 77 7 0.750672 69 5 0.96562 169 5 0.962500 64 5 0.93902 210 5 0.945098 118 6 0.98955 84 5 0.907407 45 1 0.943842 82 5 0.89317 96 7 1.000000 28 1 0.892093 61 3 0.97037 31 1 0.780474 124 5 0.990000 24 1 0.500000 2 0 0.698230 307 5 0.927093 166 5 0.98520 115 5 0.867857 58 5 0.95993 182 5 0.91243 60 5 1.000000 31 1 0.96742 382 5 0.931818 101 5 0.857407 61 4 0.833333 31 5 0.93036 127 5 0.790476 78 1 0.989673 122 7 0.76703 100 5 0.8330717 70 5 0.9720234 230 5 0.800000 118 3 0.9654886 239 5 0.568095 61 6 0.99531616 108 5 0.9793585 129 5 0.955128 120 5 0.9701925 174 5 0.97314 251 5 0.9516649 116 5 0.87081 0.805556 0.86911 0.92467 0.951672 0.90124 0.86580 0.957033 0.860680 0.90239 0.81884 1.00000 0.876203 0.91301 0.936910 0.970640 NA 0.907701 0.887520 0.93046 0.73816 0.964509 0.88914 1.00000 0.902045 0.945032 0.750517 1.000000 0.92551 0.823353 0.95755 0.88756 0.9683321 0.9678543 0.8662791 0.9772709 0.8232281 0.9807472 0.953615 0.97127 0.945659 0.942538 0.941686 1 0.90054 0.912978 -0.01131248 5 0.86376 0.86241 0.00134541 0.621740 0.36544026 insignificant 1 1.00000 insignificant 0.37754 0.75007275 insignificant 1 1.00000 insignificant -0.0150269 0.6809725 lowCoverage 1 lowCoverage 0.90039 0.945455 -0.051142 5 0.85788 0.774321 0.083557 3.2064e-01 1.3868e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 2.8034e-01 0.0685731 insignificant 1.0000e+00 1 insignificant 0.0299516 6.9026e-01 lowCoverage 1.0000e+00 lowCoverage 0.90039 0.949367 -0.0494943 5 0.84862 0.974776 -0.1261570 9.9823e-01 9.4362e-03 weaklyHypometh 1.0000e+00 6.7402e-01 insignificant 9.8419e-01 5.1436e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0802792 0.01192344 lowCoverage 0.567783 lowCoverage 0.913404 0.946602 -0.036745 5 0.85926 0.871111 -0.0118469 5.8378e-01 2.8198e-01 insignificant 1.0000e+00 1.000000 insignificant 8.3823e-01 0.2431063 insignificant 1.0000e+00 1 insignificant 0.044979 5.4267e-01 lowCoverage 1.0000e+00 lowCoverage 0.91429 0.949367 -0.0370718 5 0.92120 0.97478 -0.0535779 9.7412e-01 7.5172e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8329e-01 1.3711e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0652523 1.4310e-02 lowCoverage 0.794977 lowCoverage 0.948780 0.949239 -0.00057894 5 0.924127 0.967569 -0.0434418 0.3197638 2.6623e-01 insignificant 1.0000 1.0000e+00 insignificant 0.5322777 2.0774e-01 insignificant 1 1.0000e+00 insignificant -0.110231 1.5703e-01 lowCoverage 1.0000e+00 lowCoverage chr12 6894658 6895658 112423 ENO2 ENSG00000111674 0.752632 122 3 0.618503 121 5 0.688176 90 5 0.81059 130 3 0.841667 61 5 0.78517 127 5 0.636211 105 5 0.66002 96 5 0.727451 62 5 0.729323 59 3 0.78830 119 5 0.781818 35 3 0.305556 36 3 0.81481 61 3 0.813333 49 3 0.695652 69 3 NA 0 0 0.764177 94 3 0.273641 143 3 0.41073 80 3 0.633333 30 5 0.61385 78 3 0.65108 85 5 0.887500 64 5 0.66888 323 5 0.794719 88 5 0.482200 78 4 0.444444 27 3 0.86957 79 5 0.685687 156 5 0.673075 169 5 0.79307 104 5 0.5825000 64 5 1.0000000 145 5 0.800000 12 0 0.7872093 134 3 0.741667 71 5 0.97706131 167 5 0.6979839 121 5 0.656952 125 5 0.6222222 108 5 0.59272 125 3 0.8023810 100 5 0.58502 0.422337 0.66145 0.67576 0.783217 0.63243 0.47442 0.557154 0.591526 0.72585 0.74666 0.63700 0.303030 0.63131 0.689977 0.695652 NA 0.604184 0.275877 0.41914 0.45221 0.348886 0.53846 0.69980 0.504730 0.689977 0.295752 0.382284 0.78230 0.553322 0.51407 0.66008 0.3566434 1.0000000 0.6433566 0.6340055 0.6460463 0.9620226 0.484801 0.45221 0.440559 0.587526 0.680944 3 0.63028 0.625781 0.03099129 5 0.78500 0.77031 0.01469071 0.621533 0.96105235 insignificant 1 1.00000 insignificant 0.48210 0.99779828 insignificant 1 1.00000 insignificant -0.0042879 0.9388850 lowCoverage 1 lowCoverage 0.63028 0.844595 -0.203508 5 0.78500 0.765298 0.019703 1.0000e+00 6.9233e-06 hypomethylated 1.0000e+00 0.0034617 hypomethylated 9.7359e-01 0.0065845 weaklyHypometh 1.0000e+00 1 insignificant -0.1359100 1.0068e-01 lowCoverage 1.0000e+00 lowCoverage 0.62961 0.602763 0.0211937 5 0.69900 0.703017 -0.0040149 3.2054e-01 1.5379e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2456e-01 6.1670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0043774 0.93561277 lowCoverage 1.000000 lowCoverage 0.626073 0.844857 -0.217740 5 0.79902 0.794636 0.0043858 1.0000e+00 2.7354e-05 hypomethylated 1.0000e+00 0.013677 hypomethylated 9.9220e-01 0.0061545 weaklyHypometh 1.0000e+00 1 insignificant -0.131622 1.1233e-01 lowCoverage 1.0000e+00 lowCoverage 0.62490 0.602763 -0.0105173 5 0.67843 0.70302 -0.0245819 7.4721e-01 1.9660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1967e-01 2.8399e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0086653 8.7471e-01 lowCoverage 1.000000 lowCoverage 0.845238 0.602763 0.21765795 5 0.871417 0.703017 0.1684009 0.0005385 9.9724e-01 hypermethylated 0.1795 1.0000e+00 insignificant 0.0146876 9.9476e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.140287 9.2712e-02 lowCoverage 1.0000e+00 lowCoverage chr12 9353755 9354755 112462 DDX11L8 ENSG00000111788 0.970692 150 6 0.877635 117 5 0.954303 111 6 0.97406 94 3 0.972222 87 6 0.94154 185 6 0.985294 96 6 0.96250 78 6 0.955357 66 6 0.832738 106 6 0.92321 194 6 0.639376 52 3 0.907407 100 6 0.98142 57 3 0.922515 112 3 0.476190 44 3 1.000000 1 0 0.926364 164 6 0.991015 204 6 0.94100 176 6 0.969697 59 6 1.00000 10 1 0.93801 108 6 1.000000 48 3 1.00000 7 0 0.930520 196 6 0.927968 116 6 1.000000 54 5 0.96316 192 6 0.861837 140 6 0.914164 206 6 0.95643 198 6 0.8695988 129 6 0.8972195 168 6 0.993939 160 6 NA 0 0 0.932870 61 6 0.86981638 244 6 0.9019503 193 6 0.786434 125 6 0.8743076 102 6 0.97343 123 3 0.9347222 89 6 0.94801 0.945564 0.97551 0.95035 0.994253 0.91791 0.97383 0.965517 0.921346 0.90965 0.89400 0.88784 0.968966 0.96949 0.928766 0.861084 NA 0.937533 0.982007 0.91324 0.94107 NA 0.95350 1.00000 0.969004 0.959290 0.910113 1.000000 0.96537 0.870435 0.90907 0.94897 0.8354406 0.9706674 0.9892163 NA 0.9861111 0.8150247 0.923221 0.92945 0.867563 0.958321 0.956806 3 0.94075 0.939280 -0.00089887 6 0.93448 0.93841 -0.00392710 0.751967 0.67715624 insignificant 1 1.00000 insignificant 0.91946 0.47304517 insignificant 1 1.00000 insignificant -0.0484059 0.1349186 lowCoverage 1 lowCoverage 0.94075 0.901575 0.041614 6 0.93448 0.904132 0.030350 1.8185e-01 4.8600e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5329e-01 0.2659649 insignificant 1.0000e+00 1 insignificant -0.0059465 8.7449e-01 lowCoverage 1.0000e+00 lowCoverage 0.94075 0.909667 0.0247347 6 0.93448 0.911013 0.0234696 1.3900e-02 8.9593e-01 weaklyHypermeth 4.7931e-01 1.0000e+00 insignificant 1.1701e-01 9.0858e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0125736 0.77382191 lowCoverage 1.000000 lowCoverage 0.939280 0.901575 0.034420 6 0.93841 0.904132 0.0342771 3.2847e-01 5.8674e-01 insignificant 1.0000e+00 1.000000 insignificant 8.0971e-01 0.4851820 insignificant 1.0000e+00 1 insignificant 0.042459 1.5699e-01 lowCoverage 1.0000e+00 lowCoverage 0.93928 0.909667 0.0220790 6 0.93841 0.91101 0.0273967 2.8460e-02 8.3372e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.1062e-01 9.3933e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0609795 1.2940e-01 lowCoverage 1.000000 lowCoverage 0.901575 0.909667 -0.01868031 6 0.904132 0.911013 -0.0068804 0.1416614 6.6102e-01 insignificant 1.0000 1.0000e+00 insignificant 0.1725901 9.8179e-01 insignificant 1 1.0000e+00 insignificant 0.018520 6.5131e-01 insignificant 1.0000e+00 insignificant chr12 9685561 9686561 112470 ENSG00000212345 0.940096 497 5 0.898982 392 5 0.772174 82 5 0.96045 261 5 0.950000 49 3 0.94907 518 5 0.880556 94 5 0.81968 166 5 0.988235 66 5 0.900000 70 4 0.91848 237 5 1.000000 14 0 0.978818 95 3 0.90667 56 5 0.852778 93 5 0.666667 9 0 NA 0 0 0.938682 332 5 0.961999 365 5 0.95602 542 5 0.961111 66 5 0.96296 26 3 0.90466 182 5 1.000000 90 5 0.92000 21 3 0.973273 332 5 0.814854 109 4 0.708333 19 3 0.77261 344 5 0.925738 329 5 0.951945 374 5 0.97053 379 5 0.9109778 222 5 0.9212525 231 5 0.908571 193 5 NA 0 0 0.911320 108 5 0.93887859 338 5 0.9475225 438 5 0.967030 462 5 0.9887352 325 5 0.95667 404 5 0.9765198 341 5 0.95200 0.858276 0.94224 0.97314 0.996875 0.96217 0.97951 0.875127 0.980882 0.96125 0.94258 1.00000 0.966010 0.97333 0.865104 0.672410 NA 0.941815 0.953789 0.95350 0.95458 0.963285 0.91070 1.00000 0.870000 0.967074 0.903859 0.943841 0.96507 0.938641 0.95602 0.96295 0.8547808 0.8934696 0.9942857 NA 0.9199575 0.9241485 0.942054 0.96339 0.981559 0.954560 0.971615 2 0.93575 0.949362 -0.01484463 5 0.88616 0.82365 0.06251228 0.856454 0.14803247 insignificant 1 1.00000 insignificant 0.78110 0.63265863 insignificant 1 1.00000 insignificant 0.0018331 0.9554220 lowCoverage 1 lowCoverage 0.93596 0.909341 0.025253 5 0.93006 0.909718 0.020341 3.7222e-02 6.5549e-01 weaklyHypermeth 5.1698e-01 1.0000000 insignificant 1.9177e-01 0.6640832 insignificant 1.0000e+00 1 insignificant -0.0108659 5.8702e-01 lowCoverage 1.0000e+00 lowCoverage 0.93596 0.963452 -0.0274591 5 0.93006 0.965936 -0.0358768 9.9760e-01 1.6679e-02 weaklyHypometh 1.0000e+00 9.8112e-01 insignificant 8.8151e-01 7.2907e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0599616 0.00723212 lowCoverage 0.380638 lowCoverage 0.951015 0.909341 0.040886 5 0.94838 0.909718 0.0386601 3.7956e-03 9.5683e-01 weaklyHypermeth 6.0248e-02 1.000000 weaklyHypermeth 1.5494e-01 0.8454666 insignificant 1.0000e+00 1 insignificant -0.012699 6.4590e-01 lowCoverage 1.0000e+00 lowCoverage 0.95102 0.963452 -0.0122931 5 0.94838 0.96594 -0.0175582 8.7578e-01 1.4370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5372e-01 1.8850e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0617948 4.2266e-02 lowCoverage 1.000000 lowCoverage 0.909341 0.963452 -0.05437163 5 0.909718 0.965936 -0.0562183 0.9975763 9.0468e-03 weaklyHypometh 1.0000 1.6753e-01 insignificant 0.9944826 9.2241e-02 insignificant 1 1.0000e+00 insignificant -0.049096 8.2845e-04 lowCoverage 6.3727e-02 lowCoverage chr12 12054485 12055485 112506 ETV6 ENSG00000139083 0.875642 283 7 0.700699 266 7 0.758637 87 6 0.85240 168 7 0.566204 42 5 0.91765 236 7 0.550359 58 5 0.87960 164 6 0.765483 77 5 0.794327 79 5 0.87793 272 7 0.677778 25 2 0.790128 138 4 0.81250 10 0 0.740079 51 5 0.527778 14 0 1.000000 4 0 0.750088 160 5 0.893181 128 6 0.87719 191 6 0.873215 101 6 0.92000 35 5 0.89964 106 6 0.877028 53 5 0.89683 46 5 0.911204 356 7 0.816882 61 6 0.750000 5 0 0.89459 152 6 0.900269 335 7 0.904963 324 7 0.90391 294 7 0.0685643 214 6 0.3397309 147 7 0.173913 99 6 0.1381818 43 4 0.131961 138 7 0.08900523 350 6 0.7650012 88 6 0.810751 255 7 0.8424242 141 7 0.77579 45 4 0.7335683 149 7 0.85484 0.773834 0.72213 0.89466 0.568396 0.86818 0.40290 0.882970 0.801457 0.89461 0.85095 0.71314 0.945879 0.85485 0.864892 0.429245 0.991702 0.733986 0.893944 0.89108 0.93407 0.981132 0.93905 0.82946 0.869272 0.881639 0.759159 0.972652 0.94677 0.936286 0.93962 0.90586 0.0733516 0.3729922 0.2296965 0.1733276 0.0842779 0.1541485 0.772597 0.82806 0.846895 0.730571 0.762954 1 0.82104 0.903537 -0.07840386 6 0.86081 0.92119 -0.06038902 0.999942 0.00016620 weaklyHypometh 1 0.16620 insignificant 0.99761 0.00020204 weaklyHypometh 1 0.20204 insignificant -0.0986617 0.0043839 lowCoverage 1 lowCoverage 0.82096 0.142281 0.679888 6 0.84341 0.185481 0.657925 2.9249e-54 1.0000e+00 hypermethylated 7.3123e-52 1.0000000 hypermethylated 1.5050e-13 1.0000000 hypermethylated 3.0100e-11 1 hypermethylated 0.6234898 7.9105e-08 lowCoverage 1.1301e-05 lowCoverage 0.82096 0.789086 0.0215133 6 0.84341 0.817702 0.0257047 2.2219e-01 9.0524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7984e-01 9.6164e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0051253 0.88194631 lowCoverage 1.000000 lowCoverage 0.903433 0.142281 0.753904 6 0.91134 0.185481 0.7258626 1.0354e-53 1.0000e+00 hypermethylated 3.4513e-51 1.000000 hypermethylated 2.5431e-13 1.0000000 hypermethylated 5.0862e-11 1 hypermethylated 0.722151 1.6037e-06 hypermethylated 2.0046e-04 hypermethylated 0.90343 0.789086 0.0889343 6 0.91134 0.81770 0.0936423 4.0000e-06 1.0000e+00 weaklyHypermeth 2.5000e-04 1.0000e+00 weaklyHypermeth 3.6455e-04 9.9999e-01 weaklyHypermeth 3.6455e-02 1.00000000 weaklyHypermeth 0.0935364 3.4119e-03 weaklyHypermeth 0.286983 insignificant 0.142281 0.789086 -0.66634503 7 0.185481 0.817702 -0.6322203 1.0000000 1.1998e-26 hypomethylated 1.0000 2.9996e-24 hypomethylated 1.0000000 2.1375e-09 hypomethylated 1 4.2749e-07 hypomethylated -0.628615 1.7702e-06 hypomethylated 5.9007e-04 hypomethylated chr12 13810349 13811349 112587 ENSG00000200475 0.687714 287 8 0.720777 122 8 0.703982 94 8 0.65482 210 8 0.697403 58 7 0.73929 200 8 0.671691 76 7 0.66967 104 5 0.700750 75 8 0.821527 77 8 0.77243 261 8 0.881048 62 4 0.582363 85 6 0.73500 31 5 0.676548 101 8 0.654167 73 5 0.793087 56 4 0.642213 156 8 0.654089 191 8 0.74333 222 8 0.782143 33 4 0.71181 54 5 0.76035 143 8 0.738528 50 5 0.73148 58 5 0.687339 195 8 0.837037 48 2 0.782853 29 2 0.72222 92 5 0.722785 184 8 0.693334 212 8 0.65621 298 8 0.6857473 106 7 0.6035049 100 8 0.648186 162 8 0.7768752 55 4 0.413740 60 3 0.62166869 192 8 0.8561521 228 8 0.654318 256 8 0.6722287 286 9 0.66903 203 8 0.7147928 400 8 0.87515 0.793099 0.85220 0.84676 0.790179 0.89734 0.76165 0.828728 0.830288 0.89574 0.84842 0.90607 0.787120 0.88005 0.889117 0.760417 0.865215 0.822816 0.833207 0.87036 0.92237 0.872203 0.87038 0.88543 0.945023 0.804649 0.875649 0.758841 0.86261 0.832624 0.77321 0.87297 0.7822099 0.7951321 0.7566737 0.8453762 0.8277530 0.8250276 0.934383 0.84513 0.822729 0.863183 0.872820 2 0.77568 0.765043 0.00518381 8 0.76439 0.67640 0.08798582 0.860690 0.84040871 insignificant 1 1.00000 insignificant 0.80605 0.41138970 insignificant 1 1.00000 insignificant -0.0254110 0.2354036 insignificant 1 insignificant 0.77568 0.718519 0.064301 8 0.76439 0.419014 0.345376 6.1202e-03 9.9998e-01 weaklyHypermeth 9.2730e-02 1.0000000 weaklyHypermeth 3.1787e-03 0.9994310 weaklyHypermeth 5.8865e-02 1 weaklyHypermeth 0.0851412 1.4914e-01 insignificant 1.0000e+00 insignificant 0.77461 0.815004 -0.0356092 8 0.65968 0.697436 -0.0377609 9.9314e-01 8.2514e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8638e-01 3.9989e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0032084 0.93920014 insignificant 1.000000 insignificant 0.765043 0.718519 0.063099 8 0.67640 0.419014 0.2573906 9.7323e-03 9.9966e-01 weaklyHypermeth 1.4526e-01 1.000000 insignificant 1.6089e-02 0.9998912 weaklyHypermeth 2.6814e-01 1 insignificant 0.110552 7.5032e-02 insignificant 1.0000e+00 insignificant 0.76483 0.815004 -0.0361377 8 0.67544 0.69744 -0.0219944 8.8698e-01 1.4721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4569e-01 4.6531e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0222026 5.9943e-01 insignificant 1.000000 insignificant 0.723881 0.815004 -0.09202018 8 0.605243 0.697436 -0.0921936 0.9999998 8.4793e-04 weaklyHypometh 1.0000 2.1198e-02 weaklyHypometh 0.9999774 4.1563e-02 weaklyHypometh 1 8.2594e-01 insignificant -0.088350 1.8596e-01 insignificant 1.0000e+00 insignificant chr12 17033029 17034029 112872 LMO3 ENSG00000048540 0.837042 150 6 0.819146 122 6 0.586248 87 6 0.87449 107 5 0.788080 72 7 0.85528 222 6 0.690607 96 6 0.85749 95 5 0.753410 97 6 0.859585 97 6 0.82374 159 7 0.559161 72 6 0.870714 134 7 NA 0 0 0.827011 124 7 0.708405 57 5 0.788194 55 6 0.860221 106 5 0.745238 116 7 0.78269 228 6 0.867262 33 2 0.86111 36 4 0.85025 111 7 0.952381 51 3 0.91389 32 3 0.854385 178 6 0.876190 78 6 0.968750 27 2 0.73747 92 5 0.839806 166 7 0.835591 188 7 0.85249 286 6 0.6023645 151 5 0.5528028 112 7 0.657256 132 6 0.6476190 50 5 0.755341 59 3 0.67957981 168 7 0.9329056 180 5 0.865542 143 6 0.9207143 98 5 0.90176 119 5 0.8512478 164 6 0.79574 0.828800 0.67801 0.88088 0.771610 0.85135 0.74919 0.857326 0.837081 0.84483 0.82653 0.67699 0.865682 NA 0.835312 0.742927 0.835594 0.917072 0.768088 0.81287 0.86466 0.906977 0.83334 0.95284 0.899871 0.845700 0.860724 0.892170 0.74436 0.864260 0.86216 0.85347 0.6462523 0.6218412 0.7550636 0.7543743 0.7872195 0.7310736 0.935602 0.89992 0.951315 0.902642 0.872646 1 0.80783 0.848983 -0.03993483 6 0.80824 0.84951 -0.04127392 0.997884 0.01680946 weaklyHypometh 1 1.00000 insignificant 0.99724 0.00370512 weaklyHypometh 1 0.92628 insignificant -0.0839513 0.0044372 lowCoverage 1 lowCoverage 0.80783 0.651786 0.142187 6 0.80824 0.651036 0.157203 1.1139e-09 7.5297e-01 weaklyHypermeth 2.7848e-08 1.0000000 weaklyHypermeth 1.5000e-04 0.7256063 weaklyHypermeth 4.0540e-03 1 weaklyHypermeth 0.1343525 2.7398e-03 weaklyHypermeth 8.3794e-02 weaklyHypermeth 0.80783 0.897727 -0.0933667 5 0.80824 0.884608 -0.0763686 9.9972e-01 5.3918e-05 weaklyHypometh 1.0000e+00 8.9863e-03 weaklyHypometh 9.9999e-01 4.7162e-06 weaklyHypometh 1.0000e+00 9.4323e-04 weaklyHypometh -0.1109217 0.00049833 weaklyHypometh 0.055370 weaklyHypometh 0.848983 0.651786 0.184948 6 0.84951 0.651036 0.1984771 3.6481e-14 9.2680e-01 weaklyHypermeth 1.5861e-12 1.000000 weaklyHypermeth 1.0417e-06 0.9876368 weaklyHypermeth 6.5109e-05 1 weaklyHypermeth 0.218304 1.0336e-04 lowCoverage 5.1679e-03 lowCoverage 0.84898 0.897727 -0.0558703 5 0.84951 0.88461 -0.0350947 8.8544e-01 6.3604e-03 weaklyHypometh 1.0000e+00 8.4833e-01 insignificant 9.4234e-01 8.0441e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0269704 2.6817e-01 lowCoverage 1.000000 lowCoverage 0.651786 0.897727 -0.18510540 5 0.651036 0.884608 -0.2335718 0.9999983 2.5681e-08 weaklyHypometh 1.0000 1.7121e-06 weaklyHypometh 0.9999900 5.3085e-05 weaklyHypometh 1 3.5390e-03 weaklyHypometh -0.245274 7.7901e-05 hypomethylated 7.0820e-03 hypomethylated chr12 17033707 17034707 112873 LMO3 ENSG00000048540 0.837042 150 6 0.819146 122 6 0.586248 87 6 0.87449 107 5 0.788080 72 7 0.85528 222 6 0.690607 96 6 0.85749 95 5 0.753410 97 6 0.859585 97 6 0.82374 159 7 0.559161 72 6 0.870714 134 7 NA 0 0 0.827011 124 7 0.708405 57 5 0.788194 55 6 0.860221 106 5 0.745238 116 7 0.78269 228 6 0.867262 33 2 0.86111 36 4 0.85025 111 7 0.952381 51 3 0.91389 32 3 0.854385 178 6 0.876190 78 6 0.968750 27 2 0.73747 92 5 0.839806 166 7 0.835591 188 7 0.85249 286 6 0.6023645 151 5 0.5528028 112 7 0.657256 132 6 0.6476190 50 5 0.755341 59 3 0.67957981 168 7 0.9329056 180 5 0.865542 143 6 0.9207143 98 5 0.90176 119 5 0.8512478 164 6 0.79574 0.828800 0.67801 0.88088 0.771610 0.85135 0.74919 0.857326 0.837081 0.84483 0.82653 0.67699 0.865682 NA 0.835312 0.742927 0.835594 0.917072 0.768088 0.81287 0.86466 0.906977 0.83334 0.95284 0.899871 0.845700 0.860724 0.892170 0.74436 0.864260 0.86216 0.85347 0.6462523 0.6218412 0.7550636 0.7543743 0.7872195 0.7310736 0.935602 0.89992 0.951315 0.902642 0.872646 1 0.80783 0.848983 -0.03993483 6 0.80824 0.84951 -0.04127392 0.997884 0.01680946 weaklyHypometh 1 1.00000 insignificant 0.99724 0.00370512 weaklyHypometh 1 0.92628 insignificant -0.0839513 0.0044372 lowCoverage 1 lowCoverage 0.80783 0.651786 0.142187 6 0.80824 0.651036 0.157203 1.1139e-09 7.5297e-01 weaklyHypermeth 2.7848e-08 1.0000000 weaklyHypermeth 1.5000e-04 0.7256063 weaklyHypermeth 4.0540e-03 1 weaklyHypermeth 0.1343525 2.7398e-03 weaklyHypermeth 8.3794e-02 weaklyHypermeth 0.80783 0.897727 -0.0933667 5 0.80824 0.884608 -0.0763686 9.9972e-01 5.3918e-05 weaklyHypometh 1.0000e+00 8.9863e-03 weaklyHypometh 9.9999e-01 4.7162e-06 weaklyHypometh 1.0000e+00 9.4323e-04 weaklyHypometh -0.1109217 0.00049833 weaklyHypometh 0.055370 weaklyHypometh 0.848983 0.651786 0.184948 6 0.84951 0.651036 0.1984771 3.6481e-14 9.2680e-01 weaklyHypermeth 1.5861e-12 1.000000 weaklyHypermeth 1.0417e-06 0.9876368 weaklyHypermeth 6.5109e-05 1 weaklyHypermeth 0.218304 1.0336e-04 lowCoverage 5.1679e-03 lowCoverage 0.84898 0.897727 -0.0558703 5 0.84951 0.88461 -0.0350947 8.8544e-01 6.3604e-03 weaklyHypometh 1.0000e+00 8.4833e-01 insignificant 9.4234e-01 8.0441e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0269704 2.6817e-01 lowCoverage 1.000000 lowCoverage 0.651786 0.897727 -0.18510540 5 0.651036 0.884608 -0.2335718 0.9999983 2.5681e-08 weaklyHypometh 1.0000 1.7121e-06 weaklyHypometh 0.9999900 5.3085e-05 weaklyHypometh 1 3.5390e-03 weaklyHypometh -0.245274 7.7901e-05 hypomethylated 7.0820e-03 hypomethylated chr12 17033905 17034905 112874 LMO3 ENSG00000048540 0.837042 150 6 0.819146 122 6 0.586248 87 6 0.87449 107 5 0.788080 72 7 0.85528 222 6 0.690607 96 6 0.85749 95 5 0.753410 97 6 0.859585 97 6 0.82374 159 7 0.559161 72 6 0.870714 134 7 NA 0 0 0.827011 124 7 0.708405 57 5 0.788194 55 6 0.860221 106 5 0.745238 116 7 0.78269 228 6 0.867262 33 2 0.86111 36 4 0.85025 111 7 0.952381 51 3 0.91389 32 3 0.854385 178 6 0.876190 78 6 0.968750 27 2 0.73747 92 5 0.839806 166 7 0.835591 188 7 0.85249 286 6 0.6023645 151 5 0.5528028 112 7 0.657256 132 6 0.6476190 50 5 0.755341 59 3 0.67957981 168 7 0.9329056 180 5 0.865542 143 6 0.9207143 98 5 0.90176 119 5 0.8512478 164 6 0.79574 0.828800 0.67801 0.88088 0.771610 0.85135 0.74919 0.857326 0.837081 0.84483 0.82653 0.67699 0.865682 NA 0.835312 0.742927 0.835594 0.917072 0.768088 0.81287 0.86466 0.906977 0.83334 0.95284 0.899871 0.845700 0.860724 0.892170 0.74436 0.864260 0.86216 0.85347 0.6462523 0.6218412 0.7550636 0.7543743 0.7872195 0.7310736 0.935602 0.89992 0.951315 0.902642 0.872646 1 0.80783 0.848983 -0.03993483 6 0.80824 0.84951 -0.04127392 0.997884 0.01680946 weaklyHypometh 1 1.00000 insignificant 0.99724 0.00370512 weaklyHypometh 1 0.92628 insignificant -0.0839513 0.0044372 lowCoverage 1 lowCoverage 0.80783 0.651786 0.142187 6 0.80824 0.651036 0.157203 1.1139e-09 7.5297e-01 weaklyHypermeth 2.7848e-08 1.0000000 weaklyHypermeth 1.5000e-04 0.7256063 weaklyHypermeth 4.0540e-03 1 weaklyHypermeth 0.1343525 2.7398e-03 weaklyHypermeth 8.3794e-02 weaklyHypermeth 0.80783 0.897727 -0.0933667 5 0.80824 0.884608 -0.0763686 9.9972e-01 5.3918e-05 weaklyHypometh 1.0000e+00 8.9863e-03 weaklyHypometh 9.9999e-01 4.7162e-06 weaklyHypometh 1.0000e+00 9.4323e-04 weaklyHypometh -0.1109217 0.00049833 weaklyHypometh 0.055370 weaklyHypometh 0.848983 0.651786 0.184948 6 0.84951 0.651036 0.1984771 3.6481e-14 9.2680e-01 weaklyHypermeth 1.5861e-12 1.000000 weaklyHypermeth 1.0417e-06 0.9876368 weaklyHypermeth 6.5109e-05 1 weaklyHypermeth 0.218304 1.0336e-04 lowCoverage 5.1679e-03 lowCoverage 0.84898 0.897727 -0.0558703 5 0.84951 0.88461 -0.0350947 8.8544e-01 6.3604e-03 weaklyHypometh 1.0000e+00 8.4833e-01 insignificant 9.4234e-01 8.0441e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0269704 2.6817e-01 lowCoverage 1.000000 lowCoverage 0.651786 0.897727 -0.18510540 5 0.651036 0.884608 -0.2335718 0.9999983 2.5681e-08 weaklyHypometh 1.0000 1.7121e-06 weaklyHypometh 0.9999900 5.3085e-05 weaklyHypometh 1 3.5390e-03 weaklyHypometh -0.245274 7.7901e-05 hypomethylated 7.0820e-03 hypomethylated chr12 17422402 17423402 112931 ENSG00000212358 0.818493 379 10 0.704430 161 10 0.759278 110 10 0.85480 187 10 0.686205 75 9 0.74561 384 10 0.734859 101 6 0.75795 152 10 0.710235 124 10 0.841015 91 10 0.72610 288 10 0.700390 93 10 0.791979 140 10 0.86296 39 6 0.701878 149 10 0.716667 45 5 0.832076 86 5 0.848427 217 10 0.829082 156 10 0.81832 263 10 0.868590 51 2 0.73160 81 10 0.78124 137 10 0.765709 68 3 0.84167 60 10 0.802609 190 10 0.889411 93 9 0.939815 58 6 0.90050 175 10 0.823527 167 10 0.824281 215 10 0.75443 395 10 0.7800595 163 10 0.7198631 172 10 0.798626 164 10 0.7487374 50 5 0.651551 87 8 0.67521930 217 10 0.8799016 296 10 0.857489 345 10 0.9105472 258 10 0.87786 375 10 0.7413903 305 10 0.84210 0.767936 0.77059 0.86156 0.746308 0.83780 0.77067 0.746127 0.751829 0.84741 0.78367 0.74214 0.837522 0.85709 0.820611 0.812166 0.819194 0.855562 0.835492 0.82426 0.90331 0.797346 0.77680 0.77603 0.850763 0.822018 0.873513 0.917515 0.90080 0.847630 0.80679 0.84269 0.7376681 0.7467120 0.8168527 0.7618263 0.6914077 0.7562841 0.900319 0.90733 0.899178 0.889525 0.905567 4 0.80556 0.815976 -0.02189720 10 0.83470 0.81949 0.01521268 0.998486 0.41471691 insignificant 1 1.00000 insignificant 0.99984 0.06903325 insignificant 1 1.00000 insignificant -0.0549099 0.0253511 weaklyHypometh 1 insignificant 0.80550 0.757327 0.037898 10 0.82368 0.726054 0.097627 1.1523e-01 9.9124e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.2583e-01 0.9893369 insignificant 1.0000e+00 1 insignificant 0.0430288 1.5126e-01 insignificant 1.0000e+00 insignificant 0.80556 0.909436 -0.0898506 10 0.83470 0.844218 -0.0095168 9.9996e-01 6.8780e-05 weaklyHypometh 1.0000e+00 9.8257e-03 weaklyHypometh 9.9998e-01 8.0614e-05 weaklyHypometh 1.0000e+00 1.3436e-02 weaklyHypometh -0.0813990 0.04609658 weaklyHypometh 1.000000 insignificant 0.816351 0.757327 0.059657 10 0.84079 0.726054 0.1147338 1.6002e-02 9.9900e-01 weaklyHypermeth 2.3532e-01 1.000000 insignificant 1.9532e-03 0.9998662 weaklyHypermeth 4.3806e-02 1 weaklyHypermeth 0.097939 7.4978e-03 weaklyHypermeth 1.8287e-01 insignificant 0.81598 0.909436 -0.0706383 10 0.81949 0.84422 -0.0247295 9.9969e-01 1.5266e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9497e-01 3.5934e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0264892 4.6747e-01 insignificant 1.000000 insignificant 0.757327 0.909379 -0.13271583 10 0.726054 0.833832 -0.1077786 1.0000000 1.1067e-06 weaklyHypometh 1.0000 4.6111e-05 weaklyHypometh 0.9999939 2.3235e-04 weaklyHypometh 1 1.2229e-02 weaklyHypometh -0.124428 1.0486e-02 weaklyHypometh 3.3827e-01 insignificant chr12 20304611 20305611 113070 ENSG00000221679 0.68685 255 8 0.74573 131 8 0.58516 130 8 0.70049 157 7 0.70442 87 6 0.68806 310 8 0.56711 104 8 0.74226 92 6 0.59613 112 8 0.75230 119 8 0.75375 249 8 0.58996 65 6 0.86692 147 8 0.80556 27 1 0.70395 196 8 0.76174 61 6 0.71495 77 6 0.66993 147 8 0.71105 191 8 0.65308 242 8 0.71310 78 7 0.83460 93 6 0.80860 144 8 0.77756 87 3 0.68092 62 6 0.56259 145 8 0.81341 108 8 0.74153 60 4 0.58199 115 8 0.63444 159 6 0.73453 146 8 0.72870 375 8 0.71779 114 6 0.55362 111 8 0.71553 168 6 0.84676 43 4 0.58644 105 7 0.66582 121 8 0.75103 217 7 0.71064 283 8 0.72550 198 7 0.70734 258 8 0.66726 228 8 0.77589 0.75274 0.65330 0.77718 0.79436 0.78054 0.65276 0.79229 0.70372 0.76472 0.81809 0.70726 0.86401 0.77922 0.77047 0.78347 0.74116 0.72110 0.78894 0.80828 0.79604 0.86448 0.80783 0.84789 0.80767 0.71731 0.88460 0.71887 0.68721 0.79425 0.83032 0.80711 0.75077 0.66643 0.73032 0.82329 0.71547 0.70564 0.83420 0.79398 0.79943 0.79585 0.82216 6 0.77613 0.80534 -0.0174106 8 0.69871 0.69714 0.0015697 0.689974 0.3373646 insignificant 1 1 insignificant 0.96550 0.146367 insignificant 1 1 insignificant -0.0176934 0.5709309 insignificant 1 insignificant 0.77620 0.70846 0.062403 6 0.70672 0.63784 0.068877 9.4121e-04 0.975358 weaklyHypermeth 8.5565e-02 1 weaklyHypermeth 0.11404674 0.903880 insignificant 1.00000 1 insignificant 0.018975 0.694337 insignificant 1 insignificant 0.77574 0.78970 -0.031558 8 0.66523 0.64516 0.020068 0.91381 0.15534379 insignificant 1 1.000000 insignificant 0.981700 0.08726137 insignificant 1 1.00000 insignificant -0.012386 0.57739375 insignificant 1.000000 insignificant 0.80639 0.70846 0.083257 6 0.72559 0.63784 0.087749 1.7719e-04 0.99095160 weaklyHypermeth 1.4766e-02 1.00000 weaklyHypermeth 0.00689519 0.9800161 weaklyHypermeth 0.62939 1 insignificant 0.036668 0.4828527 insignificant 1.00000 insignificant 0.80561 0.78970 -0.0148421 8 0.70052 0.64516 0.05536062 0.71051 0.3248949 insignificant 1 1.00000 insignificant 0.43356 0.4022884 insignificant 1 1 insignificant 0.0053079 0.8572704 insignificant 1.00000 insignificant 0.70846 0.79036 -0.095483 6 0.63784 0.72581 -0.087968 0.9951986 7.0687e-05 weaklyHypometh 1 0.00785406 weaklyHypometh 0.9868609 4.4182e-03 weaklyHypometh 1 0.631166 insignificant -0.031361 0.51289628 insignificant 1.00000 insignificant chr12 20465504 20466504 113081 PDE3A ENSG00000172572 0.75704 306 8 0.67192 185 8 0.63402 145 8 0.71219 185 8 0.61241 104 8 0.61800 390 8 0.69222 97 8 0.63879 190 8 0.46033 110 8 0.70447 92 8 0.75234 269 8 0.60571 99 5 0.81617 158 8 0.62500 22 1 0.68630 122 8 0.63627 97 5 0.62920 64 5 0.69319 184 8 0.72463 145 8 0.62396 363 8 0.71732 64 6 0.72101 94 7 0.73257 152 8 0.81741 106 7 0.84752 97 7 0.64804 239 8 0.70933 119 7 0.87851 66 5 0.68428 107 8 0.74416 294 8 0.75483 241 8 0.66793 476 8 0.61637 200 8 0.55609 113 8 0.70512 183 8 0.55833 39 4 0.60113 132 7 0.64073 302 8 0.79259 306 8 0.80649 206 8 0.77043 246 8 0.69459 253 8 0.77399 267 8 0.82239 0.76674 0.69407 0.83154 0.65942 0.81776 0.73798 0.75826 0.57681 0.77198 0.83522 0.74499 0.88490 0.77720 0.79386 0.71032 0.73832 0.78630 0.76823 0.77963 0.75505 0.74204 0.85273 0.83278 0.86567 0.77903 0.76312 0.77512 0.78105 0.77242 0.75218 0.76403 0.75748 0.74831 0.72436 0.64865 0.66828 0.72177 0.85048 0.89054 0.85707 0.80724 0.82681 4 0.76525 0.76302 0.0011764 8 0.63287 0.69172 -0.0588538 0.872967 0.1996570 insignificant 1 1 insignificant 0.97450 0.011341 inconclusive 1 1 insignificant -0.0788672 0.0063953 weaklyHypometh 1 insignificant 0.76534 0.69659 0.064866 8 0.62979 0.57262 0.057176 4.2463e-04 0.970777 weaklyHypermeth 4.7181e-02 1 weaklyHypermeth 0.03686096 0.956403 weaklyHypermeth 1.00000 1 insignificant 0.051745 0.094575 insignificant 1 insignificant 0.76650 0.83099 -0.056377 8 0.69277 0.72081 -0.028036 0.99934 0.01208581 weaklyHypometh 1 1.000000 insignificant 0.999997 0.00029971 weaklyHypometh 1 0.29971 insignificant -0.102909 0.00205353 weaklyHypometh 0.410707 insignificant 0.76341 0.69659 0.065964 8 0.70006 0.57262 0.127441 1.5393e-04 0.99045225 weaklyHypermeth 1.3993e-02 1.00000 weaklyHypermeth 0.00072648 0.9998654 weaklyHypermeth 0.18162 1 insignificant 0.130613 0.0010017 weaklyHypermeth 0.50083 insignificant 0.76393 0.83099 -0.0574351 8 0.72006 0.72081 -0.00074502 0.97640 0.0092776 weaklyHypometh 1 1.00000 insignificant 0.94960 0.0074731 weaklyHypometh 1 1 insignificant -0.0240423 0.4103268 insignificant 1.00000 insignificant 0.69804 0.83099 -0.120258 8 0.62988 0.72081 -0.090930 0.9953485 1.4200e-05 weaklyHypometh 1 0.00236659 weaklyHypometh 0.9999120 3.8794e-05 weaklyHypometh 1 0.038794 weaklyHypometh -0.154655 0.00059699 weaklyHypometh 0.29850 insignificant chr12 22999518 23000518 113173 ETNK1 ENSG00000139163 0.81330 153 6 0.78590 91 6 0.75331 54 6 0.82423 93 6 0.75609 64 5 0.82006 158 6 0.77893 88 6 0.69028 35 3 0.67217 65 4 0.76806 56 6 0.80261 125 6 0.71726 74 6 0.81349 69 6 NA 0 0 0.85614 70 6 0.81768 50 6 0.80583 71 6 0.82185 81 6 0.81600 127 6 0.82956 206 6 0.78611 41 3 0.80839 46 3 0.86310 101 6 0.85198 34 3 0.90556 25 3 0.88134 94 6 0.85123 63 5 0.78426 36 3 0.73595 52 5 0.81854 103 6 0.84347 120 6 0.81065 211 6 0.54075 75 5 0.70122 82 6 0.69721 122 6 0.80352 66 6 0.87325 38 3 0.74156 115 6 0.89187 240 6 0.84212 171 6 0.84932 131 6 0.85060 148 6 0.85297 154 6 0.84716 0.76855 0.80298 0.87885 0.77064 0.81994 0.81457 0.72175 0.80117 0.80251 0.83419 0.69896 0.80966 NA 0.86820 0.79550 0.79791 0.87789 0.83567 0.80864 0.77249 0.80530 0.84161 0.80420 0.86252 0.87933 0.81184 0.74119 0.79830 0.84262 0.80714 0.80832 0.54910 0.61036 0.72798 0.69579 0.86729 0.72327 0.86841 0.82770 0.84396 0.81724 0.85684 3 0.80520 0.82181 -0.0135498 6 0.79367 0.82420 -0.0305306 0.797752 0.0209461 weaklyHypometh 1 1 insignificant 0.77812 0.027436 weaklyHypometh 1 1 insignificant -0.0419200 0.0260738 lowCoverage 1 lowCoverage 0.80520 0.71285 0.090879 6 0.79367 0.73968 0.053989 1.3234e-05 0.609606 weaklyHypermeth 1.6542e-03 1 weaklyHypermeth 0.00157262 0.938645 weaklyHypermeth 0.26210 1 insignificant 0.060209 0.254531 insignificant 1 insignificant 0.80520 0.86848 -0.053861 6 0.79367 0.85971 -0.066038 0.98464 0.00037115 weaklyHypometh 1 0.092787 weaklyHypometh 0.966591 0.00469025 weaklyHypometh 1 1.00000 insignificant -0.070915 0.00011436 weaklyHypometh 0.028590 weaklyHypometh 0.82181 0.71285 0.103113 6 0.82420 0.73968 0.084520 3.8079e-05 0.99640998 weaklyHypermeth 3.8079e-03 1.00000 weaklyHypermeth 0.00048700 0.9992548 weaklyHypermeth 0.16233 1 insignificant 0.102129 0.0785225 lowCoverage 1.00000 lowCoverage 0.82181 0.86848 -0.0313087 6 0.82420 0.85971 -0.03550737 0.99262 0.0580542 insignificant 1 1.00000 insignificant 0.79668 0.5076220 insignificant 1 1 insignificant -0.0289954 0.0936386 lowCoverage 1.00000 lowCoverage 0.71285 0.86848 -0.135427 6 0.73968 0.85971 -0.120027 0.9998427 4.3554e-04 weaklyHypometh 1 0.03959440 weaklyHypometh 0.9998115 1.7521e-03 weaklyHypometh 1 0.350417 insignificant -0.131124 0.03538814 weaklyHypometh 1.00000 insignificant chr12 26321721 26322721 113569 SSPN ENSG00000123096 0.86040 329 8 0.83395 353 8 0.69588 207 8 0.82077 248 7 0.82671 122 8 0.88672 467 8 0.83142 131 8 0.88495 259 8 0.85660 229 8 0.91110 152 8 0.82124 332 8 0.67376 72 6 0.84089 256 8 0.90245 121 6 0.87167 188 8 0.64499 83 6 0.88246 40 2 0.73466 250 7 0.88178 107 6 0.88406 390 8 0.90224 92 6 0.84225 119 6 0.91522 190 8 0.79140 143 7 0.81746 57 4 0.93867 387 8 0.82085 136 8 0.77557 113 6 0.80642 130 8 0.82172 476 8 0.82012 346 8 0.90537 447 8 0.54071 336 8 0.88170 108 6 0.73920 306 8 0.20833 9 1 0.80404 238 8 0.25559 379 8 0.90202 245 8 0.90712 216 6 0.86226 170 7 0.83774 141 4 0.92419 253 8 0.86063 0.82945 0.70234 0.91127 0.92104 0.88742 0.83099 0.87012 0.83642 0.89594 0.91877 0.76852 0.94775 0.91477 0.85904 0.77557 0.87489 0.76789 0.90456 0.89822 0.92518 0.79870 0.89858 0.88545 0.94117 0.92739 0.80636 0.90861 0.88422 0.91950 0.91110 0.89495 0.52352 0.87591 0.73340 0.39324 0.91146 0.19498 0.90015 0.90540 0.82063 0.91461 0.91222 4 0.86531 0.90361 -0.0377533 8 0.78789 0.80736 -0.0194730 0.992871 0.0026409 weaklyHypometh 1 1 insignificant 0.97914 0.014146 weaklyHypometh 1 1 insignificant -0.0191195 0.4211203 insignificant 1 insignificant 0.86531 0.61991 0.257096 8 0.78789 0.55809 0.229794 1.4732e-13 0.999997 hypermethylated 4.9106e-11 1 hypermethylated 0.00585940 0.953923 weaklyHypermeth 0.73242 1 insignificant 0.255727 0.080757 insignificant 1 insignificant 0.86531 0.88780 -0.028119 8 0.78789 0.80264 -0.014750 0.95227 0.02346458 weaklyHypometh 1 1.000000 insignificant 0.979549 0.00349404 weaklyHypometh 1 1.00000 insignificant -0.059344 0.02390229 weaklyHypometh 1.000000 insignificant 0.90361 0.61991 0.291979 8 0.80736 0.55809 0.249267 4.7772e-11 1.00000000 hypermethylated 1.1943e-08 1.00000 hypermethylated 0.00156803 0.9978522 weaklyHypermeth 0.26134 1 insignificant 0.274846 0.0656428 insignificant 1.00000 insignificant 0.90361 0.88780 0.0139720 8 0.80736 0.80264 0.00472340 0.22177 0.4478224 insignificant 1 1.00000 insignificant 0.53491 0.1462867 insignificant 1 1 insignificant -0.0402245 0.0973426 insignificant 1.00000 insignificant 0.61991 0.88780 -0.294001 8 0.55809 0.80264 -0.244544 0.9999998 1.8452e-05 hypomethylated 1 0.00263598 hypomethylated 0.9994921 1.4204e-03 weaklyHypometh 1 0.350417 insignificant -0.315071 0.04291475 weaklyHypometh 1.00000 insignificant chr12 32127409 32128409 113787 C12orf35 ENSG00000174718 0.63392 149 5 0.86022 80 5 0.88863 108 5 0.88751 138 7 0.92051 34 4 0.84788 227 7 0.74399 69 5 0.91066 79 5 0.93590 63 5 0.94598 74 5 0.95472 187 5 0.88505 50 5 0.92240 117 5 NA 0 0 0.91752 105 5 1.00000 45 5 0.87727 52 5 0.90467 169 6 0.75422 95 5 0.86040 195 5 0.73529 26 1 0.88393 43 4 0.83030 130 5 0.82241 49 3 0.91469 47 5 0.81351 152 7 0.89565 36 3 0.69500 29 2 0.92222 52 5 0.86948 124 7 0.79793 117 7 0.84449 268 7 0.56727 82 5 0.41273 66 5 0.75680 54 3 0.60674 56 5 0.82238 86 5 0.87653 120 7 0.92675 172 7 0.90184 200 7 0.90856 150 7 0.96658 114 5 0.90454 226 7 0.94310 0.88105 0.89769 0.95747 0.86486 0.91475 0.76338 0.91317 0.93663 0.92078 0.92870 0.88524 0.92579 NA 0.94371 1.00000 0.82386 0.92035 0.81584 0.87480 0.78478 0.90456 0.95721 0.83694 0.88452 0.86789 0.86243 0.84780 0.89565 0.90208 0.91566 0.87071 0.47881 0.37697 0.82497 0.63109 0.81052 0.84677 0.92132 0.92178 0.95381 0.94997 0.95177 3 0.90560 0.87698 0.0166015 5 0.85259 0.82484 0.0277497 0.145687 0.9682272 insignificant 1 1 insignificant 0.36071 0.910960 insignificant 1 1 insignificant 0.0409838 0.1543055 lowCoverage 1 lowCoverage 0.90560 0.68103 0.217149 5 0.85259 0.70280 0.149784 6.7640e-10 0.999653 hypermethylated 1.1273e-07 1 hypermethylated 0.00014818 0.999906 hypermethylated 0.06812 1 hypermethylated 0.202651 0.035705 lowCoverage 1 lowCoverage 0.90560 0.94316 -0.044473 5 0.85259 0.91132 -0.058736 0.90479 0.00478169 weaklyHypometh 1 0.818178 insignificant 0.909478 0.00712554 weaklyHypometh 1 1.00000 insignificant -0.045259 0.06201112 lowCoverage 1.000000 lowCoverage 0.87698 0.68103 0.190738 5 0.82484 0.70280 0.122034 1.5927e-05 0.97694325 weaklyHypermeth 1.9747e-03 1.00000 weaklyHypermeth 0.00229846 0.9976733 weaklyHypermeth 0.28731 1 insignificant 0.161667 0.0743885 lowCoverage 1.00000 lowCoverage 0.87698 0.94316 -0.0603425 5 0.82484 0.91132 -0.08648538 0.99897 0.0008373 weaklyHypometh 1 0.58555 insignificant 0.99612 0.0186969 weaklyHypometh 1 1 insignificant -0.0862430 0.0021725 lowCoverage 0.54312 lowCoverage 0.68103 0.94316 -0.250549 5 0.70280 0.91132 -0.208520 0.9999469 1.0972e-05 hypomethylated 1 0.00219431 hypomethylated 0.9999313 2.7946e-04 hypomethylated 1 0.139730 insignificant -0.247910 0.01744714 weaklyHypometh 1.00000 insignificant chr12 32769983 32770983 113801 ENSG00000201563 0.80000 58 4 0.79320 69 5 0.76000 21 1 0.82853 149 4 0.95000 49 4 0.82500 95 5 0.70000 25 4 0.90000 34 5 0.76667 14 0 0.95000 16 0 0.88665 105 5 1.00000 19 2 0.90000 14 1 0.93333 24 1 0.93333 13 1 0.83333 12 0 NA 0 0 0.77778 34 3 0.91818 26 1 0.94286 25 3 0.91667 12 0 1.00000 6 0 0.82000 48 5 0.66000 22 3 0.93939 33 3 0.84044 89 5 0.75000 12 0 0.90000 15 1 0.90769 17 1 0.70152 56 5 0.83347 63 5 0.85893 66 5 0.91905 65 5 0.85000 36 4 0.97500 13 1 0.91667 24 4 0.96000 57 5 0.93333 49 5 0.97143 140 4 0.94561 74 4 0.96927 158 4 NA 0 0 0.75647 202 4 1.00000 0.89776 0.68333 0.93644 0.94444 1.00000 0.88889 0.94444 0.77778 1.00000 0.89700 1.00000 1.00000 1.00000 1.00000 0.77778 NA 0.91667 1.00000 1.00000 1.00000 1.00000 0.96667 0.71111 0.93939 0.92157 1.00000 1.00000 1.00000 0.78788 0.84149 0.97917 1.00000 0.83333 0.94444 0.88889 1.00000 1.00000 0.97143 0.90936 0.95830 NA 0.93412 0 0.88279 0.82232 0.0379148 5 0.86603 0.82501 0.0410196 0.070474 0.9818248 insignificant 1 1 insignificant 0.20726 0.937221 insignificant 1 1 insignificant 0.0190891 0.5861521 lowCoverage 1 lowCoverage 0.88279 0.93852 -0.049733 5 0.86603 0.92594 -0.059909 9.7149e-01 0.024105 weaklyHypometh 1.0000e+00 1 insignificant 0.97265844 0.040094 weaklyHypometh 1.00000 1 insignificant -0.062577 0.027922 lowCoverage 1 lowCoverage 0.88279 0.95296 -0.015274 4 0.86603 0.91380 -0.047762 0.91411 0.35882638 lowCoverage 1 1.000000 lowCoverage 0.081113 0.95962157 lowCoverage 1 1.00000 lowCoverage -0.047597 0.43818297 lowCoverage 1.000000 lowCoverage 0.82232 0.93852 -0.091707 5 0.82501 0.92594 -0.100928 9.9881e-01 0.00017878 weaklyHypometh 1.0000e+00 0.17878 insignificant 0.99706228 0.0016631 weaklyHypometh 1.00000 1 insignificant -0.081666 0.0284982 lowCoverage 1.00000 lowCoverage 0.82232 0.95296 -0.0458238 4 0.82501 0.91380 -0.08878150 0.98762 0.0716526 lowCoverage 1 1.00000 lowCoverage 0.27331 0.8388665 lowCoverage 1 1 lowCoverage -0.0666865 0.3111675 lowCoverage 1.00000 lowCoverage 0.93852 0.95296 0.012082 4 0.92594 0.91380 0.012147 0.0045567 9.1064e-01 lowCoverage 1 1.00000000 lowCoverage 0.0023932 9.7084e-01 lowCoverage 1 1.000000 lowCoverage 0.014979 0.79879358 lowCoverage 1.00000 lowCoverage chr12 40327781 40328781 113945 PDZRN4 ENSG00000165966 0.79847 221 6 0.88826 85 6 0.87778 16 3 0.86255 130 6 1.00000 6 0 0.83910 313 6 0.92424 39 3 0.67738 28 2 0.48283 31 3 0.75000 4 0 0.86679 38 3 1.00000 3 0 0.86015 77 3 NA 0 0 0.80455 46 5 0.77778 18 3 0.75000 5 0 0.87219 258 6 0.78030 38 3 0.80434 251 6 0.85556 22 3 0.88528 74 3 0.87045 110 6 1.00000 26 3 0.92593 36 3 0.83502 122 6 0.57647 46 3 0.52698 27 3 0.82500 75 4 0.87270 163 6 0.88043 78 4 0.69674 65 4 0.65443 84 4 0.65152 42 3 0.78333 67 3 0.56768 41 3 0.73757 21 3 0.85012 62 3 0.85236 182 6 0.90611 219 6 0.85267 225 6 0.90774 133 6 0.79703 175 6 0.86513 0.96970 0.86667 0.90909 1.00000 0.94166 0.81818 0.67619 0.72054 1.00000 0.93939 NA 0.94435 NA 0.87273 0.72222 0.95950 0.95507 0.83333 0.87511 0.94444 0.86041 0.98246 1.00000 0.92593 0.90152 0.94118 0.95238 0.96667 0.87175 1.00000 0.97899 0.39184 0.40404 0.66667 0.60606 0.65608 1.00000 0.97500 0.95257 0.98156 0.90107 0.92167 0 0.86434 0.87559 -0.0264119 6 0.83317 0.85959 -0.0264190 0.989629 0.1271433 insignificant 1 1 insignificant 0.92732 0.164959 insignificant 1 1 insignificant 0.0093865 0.8485657 lowCoverage 1 lowCoverage 0.86434 0.64984 0.193445 6 0.83317 0.65952 0.173657 9.0617e-15 0.954132 weaklyHypermeth 4.5308e-12 1 weaklyHypermeth 0.00092531 0.988027 weaklyHypermeth 0.18506 1 insignificant 0.114492 0.044932 lowCoverage 1 lowCoverage 0.86434 0.90364 -0.035191 6 0.83317 0.85804 -0.024871 0.93443 0.01977970 weaklyHypometh 1 1.000000 insignificant 0.936770 0.23846151 insignificant 1 1.00000 insignificant -0.041251 0.23485040 lowCoverage 1.000000 lowCoverage 0.87559 0.64984 0.214960 6 0.85959 0.65952 0.200076 3.1434e-11 0.98610385 hypermethylated 1.0478e-08 1.00000 hypermethylated 0.00692326 0.9844655 weaklyHypermeth 0.62939 1 insignificant 0.105106 0.0939844 lowCoverage 1.00000 lowCoverage 0.87559 0.90364 -0.0037805 6 0.85959 0.85804 0.00154801 0.74248 0.4889626 insignificant 1 1.00000 insignificant 0.69285 0.8206409 insignificant 1 1 insignificant -0.0506378 0.2839816 lowCoverage 1.00000 lowCoverage 0.64984 0.90364 -0.215372 6 0.65952 0.85804 -0.198528 0.8912782 5.3181e-07 hypomethylated 1 0.00024566 hypomethylated 0.9734064 1.5718e-02 weaklyHypometh 1 1.000000 insignificant -0.155744 0.01193221 lowCoverage 1.00000 lowCoverage chr12 46469594 46470594 114228 SLC48A1 ENSG00000211584 0.8610455 171 5 0.8923467 172 5 0.7827774 120 5 0.7298535 118 3 0.7027976 63 5 0.886141 266 6 0.6436913 76 5 0.7419806 99 5 0.6591435 67 5 0.8974138 53 3 0.8205521 260 6 0.905178 53 5 0.9140100 104 6 0.97619 28 3 0.920720 78 6 0.8571429 47 4 0.534871 835 6 0.9743864 165 3 0.9567972 192 6 0.869613 221 6 0.529086 138 6 0.8732601 76 3 0.616733 85 6 0.809354 96 6 0.899741 208 3 0.9231133 177 5 0.822475 70 3 0.488889 28 2 0.918591 94 3 0.6019370 202 5 0.866086 194 5 0.9349562 312 6 0.4699685 137 5 0.914792 186 6 0.701754 227 5 0.655127 95 2 0.433707 90 6 0.7562924 171 5 0.7929485 148 5 0.9044231 167 6 0.975726 184 2 0.9301831 61 2 0.938034 129 5 0.7777886 0.7963670 0.8691520 0.8236542 0.8932150 0.8065037 0.6869701 0.7775101 0.8090717 0.8612505 0.8174001 0.9356835 0.8646736 0.9560375 0.9034432 0.6781264 0.716942 0.8896239 0.9183993 0.874937 0.661764 0.9082708 0.7596094 0.9044530 0.8808950 0.8462374 0.766168 0.5390295 0.881397 0.8783055 0.8690903 0.8746639 0.8465376 0.9608576 0.4083944 0.819523 0.782421 0.9698723 0.8614421 0.880192 0.932639 0.8025532 0.882050 2 0.8143036 0.8558666 -0.0448343 5 0.7609918 0.6370136 1.2398e-01 5.5168e-01 0.2409127 insignificant 1.000000 1 insignificant 7.3046e-01 0.876049 insignificant 1.000000 1 insignificant 0.0526474 0.351466 lowCoverage 1 lowCoverage 0.8143036 0.8276243 -0.00828630 5 0.7609918 0.5196234 0.2413684 5.1339e-03 0.3927186 inconclusive 7.6625e-02 1 inconclusive 2.5117e-02 0.77086265 inconclusive 4.7391e-01 1.000000 insignificant 0.17105919 6.9466e-02 lowCoverage 1.0000e+00 lowCoverage 0.8142454 0.882438 -0.0766478 5 0.7370910 0.867875 -0.13078378 9.9872e-01 0.00523804 weaklyHypometh 1.0000e+00 0.447197 insignificant 9.9992e-01 0.02048977 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.08193040 0.07216114 lowCoverage 1.00000 lowCoverage 0.8553571 0.8267108 0.03616358 5 0.5839291 0.4763214 0.10760770 3.3704e-01 0.8687330 insignificant 1.0000e+00 1 insignificant 3.9902e-01 0.7165559 insignificant 1.0000e+00 1 insignificant 0.1184118 2.0976e-01 lowCoverage 1.0000e+00 lowCoverage 0.8555224 0.882438 -0.0282499 5 0.6007150 0.867875 -2.6716e-01 9.9420e-01 0.0116992 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9995e-01 0.017057 weaklyHypometh 1.0000e+00 1 insignificant -0.1345778 0.0323236 lowCoverage 1.00000 lowCoverage 0.8285398 0.882438 -0.0638412 5 0.5715857 0.867875 -0.2962891 9.5805e-01 5.2701e-03 weaklyHypometh 1.0000e+00 1.1373e-01 insignificant 9.8690e-01 1.8572e-02 weaklyHypometh 1.0000000 4.2209e-01 insignificant -0.2529896 1.6942e-02 lowCoverage 0.4344172 lowCoverage chr12 46469947 46470947 114229 SLC48A1 ENSG00000211584 0.9044027 532 13 0.9000280 407 12 0.8491119 332 13 0.8426431 549 11 0.7939574 127 9 0.909256 652 14 0.8125971 281 13 0.8465901 304 13 0.7809861 295 13 0.8661599 217 11 0.8844704 494 14 0.902191 150 13 0.9441662 339 14 0.97619 28 3 0.890999 246 14 0.8699634 107 7 0.703634 928 14 0.9644868 568 11 0.9308731 377 14 0.924221 548 14 0.683073 294 14 0.9319705 297 11 0.774925 360 14 0.876998 218 14 0.904509 323 11 0.9154075 531 13 0.869776 242 11 0.710355 193 10 0.919128 281 11 0.7836532 554 13 0.907674 443 13 0.9222941 729 14 0.6384793 353 13 0.908662 350 13 0.844751 714 13 0.805769 202 9 0.635967 224 14 0.8546774 474 13 0.8642587 559 13 0.9208288 527 14 0.953250 501 10 0.9381995 442 10 0.945860 562 13 0.8955852 0.8709981 0.9134375 0.9068388 0.9095068 0.8962215 0.8845783 0.8937517 0.8844809 0.8629077 0.8871211 0.8854109 0.9416609 NA 0.8868930 0.8616889 0.850287 0.9246119 0.9189812 0.943632 0.852108 0.9538766 0.8857295 0.9389350 0.9100042 0.9063905 0.880043 0.8338212 0.908002 0.9395921 0.9203384 0.9047529 0.8528342 0.9308628 0.8023112 0.913227 0.900775 0.9761774 0.9263306 0.921427 0.942331 0.9034544 0.926521 9 0.8796952 0.9047939 -0.0223163 13 0.8307862 0.7613885 6.9398e-02 8.3445e-01 0.2430491 insignificant 1.000000 1 insignificant 9.2524e-01 0.724450 insignificant 1.000000 1 insignificant 0.0248660 0.410048 insignificant 1 insignificant 0.8796952 0.8942142 -0.00706125 13 0.8307862 0.6911951 0.1395911 1.1883e-02 0.1434318 inconclusive 1.6975e-01 1 insignificant 1.5612e-01 0.30757664 insignificant 1.0000e+00 1.000000 insignificant 0.09346207 1.0950e-01 insignificant 1.0000e+00 insignificant 0.8796791 0.929371 -0.0395714 13 0.8213854 0.901492 -0.08010654 9.9991e-01 0.00581356 weaklyHypometh 1.0000e+00 0.447197 insignificant 9.9951e-01 0.03176084 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04963314 0.04204013 weaklyHypometh 1.00000 insignificant 0.9045913 0.8938282 0.01452439 13 0.7233191 0.6566353 0.06668375 3.7313e-01 0.6646259 insignificant 1.0000e+00 1 insignificant 6.7827e-01 0.5496876 insignificant 1.0000e+00 1 insignificant 0.0685961 2.3916e-01 insignificant 1.0000e+00 insignificant 0.9047085 0.929371 -0.0152046 13 0.7481323 0.901492 -1.5336e-01 9.9864e-01 0.0333726 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9970e-01 0.067562 insignificant 1.0000e+00 1 insignificant -0.0744992 0.0257454 weaklyHypometh 1.00000 insignificant 0.8946004 0.929371 -0.0266401 13 0.7295948 0.901492 -0.1718971 7.5463e-01 1.6895e-02 weaklyHypometh 1.0000e+00 2.7573e-01 insignificant 8.2739e-01 1.2468e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1430952 2.8513e-02 weaklyHypometh 0.6198582 insignificant chr12 46487787 46488787 114230 HDAC7 ENSG00000061273 0.8487638 271 7 0.6437038 239 7 0.7307853 137 7 0.7480080 309 7 0.8506494 73 5 0.929188 358 7 0.7672932 105 7 0.8768682 203 7 0.7809912 123 7 0.6420460 125 5 0.7704520 263 7 0.768229 53 3 0.7024620 182 7 0.74710 131 7 0.647321 188 7 0.3080808 46 3 0.416667 6 0 0.5503647 398 7 0.8853119 213 7 0.780898 226 7 0.605691 113 7 0.5265176 110 3 0.666020 194 7 0.739609 108 7 0.751452 197 7 0.8458764 288 7 0.662874 119 6 0.539065 60 6 0.888485 198 7 0.7316208 290 7 0.892274 269 7 0.8541098 278 7 0.2913483 190 7 0.301567 122 7 0.281650 284 4 0.364021 106 7 0.305053 276 8 0.4584506 313 7 0.5312561 211 7 0.4956920 202 7 0.630487 205 7 0.6618865 162 7 0.537531 229 7 0.8128282 0.6216954 0.7343455 0.8185848 0.8311189 0.9052172 0.7617029 0.8316196 0.7315735 0.7991542 0.7793961 0.7379274 0.7030441 0.7749088 0.7762821 0.5535850 0.615847 0.5656354 0.8669511 0.791440 0.725013 0.5100013 0.8875644 0.8268629 0.7554209 0.8239067 0.792763 0.6722466 0.859895 0.8145318 0.8740666 0.7675712 0.3466168 0.2686363 0.3543450 0.298407 0.372633 0.4689897 0.6263753 0.612034 0.669261 0.6484286 0.587891 3 0.7680285 0.8006301 -0.0333649 7 0.6913229 0.7535352 -6.2212e-02 8.6854e-01 0.4161070 insignificant 1.000000 1 insignificant 9.2573e-01 0.582154 insignificant 1.000000 1 insignificant -0.0055402 0.913892 insignificant 1 insignificant 0.7680483 0.4032634 0.37815825 7 0.7391536 0.3466603 0.3924932 4.3970e-26 0.9999758 hypermethylated 3.9972e-24 1 hypermethylated 1.5176e-11 1.00000000 hypermethylated 5.0587e-09 1.000000 hypermethylated 0.38607766 2.9128e-08 hypermethylated 3.2364e-06 hypermethylated 0.7680483 0.607746 0.1556695 7 0.7391536 0.523671 0.21548239 5.0943e-08 1.00000000 weaklyHypermeth 5.7318e-06 1.000000 weaklyHypermeth 4.2143e-06 1.00000000 weaklyHypermeth 8.4286e-04 1.000000 weaklyHypermeth 0.14838875 0.00656428 weaklyHypermeth 0.37348 insignificant 0.8008112 0.4051123 0.40946017 7 0.7631873 0.4192536 0.34393368 1.5580e-21 0.9999920 hypermethylated 1.1985e-19 1 hypermethylated 1.5894e-09 1.0000000 hypermethylated 5.2980e-07 1 hypermethylated 0.3916178 2.8455e-07 hypermethylated 2.8455e-05 hypermethylated 0.8008112 0.607532 0.1897171 7 0.7631873 0.521041 2.4215e-01 4.9598e-10 1.0000000 weaklyHypermeth 9.9195e-08 1.00000 weaklyHypermeth 5.6874e-06 1.000000 weaklyHypermeth 1.1375e-03 1 weaklyHypermeth 0.1539289 0.0074813 weaklyHypermeth 0.46758 insignificant 0.4051123 0.607532 -0.2252182 7 0.4192536 0.521041 -0.1017874 9.1094e-01 2.9441e-06 hypomethylated 1.0000e+00 1.4020e-04 hypomethylated 9.9490e-01 2.0406e-04 hypomethylated 1.0000000 1.2004e-02 hypomethylated -0.2376889 3.9295e-04 hypomethylated 0.0491192 hypomethylated chr12 46627010 46628010 114242 VDR ENSG00000111424 0.8524420 298 5 0.7565599 352 5 0.5216257 188 5 0.7528045 161 5 0.8486157 184 5 0.897536 518 5 0.7780812 247 5 0.8336313 211 5 0.8553306 155 5 0.7744442 189 5 0.8632992 330 5 0.728929 51 4 0.8477403 153 5 0.90308 143 5 0.878063 234 5 0.9013043 49 2 1.000000 55 1 0.6570217 227 5 0.9173749 470 5 0.869837 360 5 0.548663 117 5 0.7333333 13 0 0.889841 192 5 0.841534 101 5 0.600000 8 0 0.8549640 430 5 0.815948 235 5 0.935807 68 5 0.905727 397 5 0.7189400 509 5 0.701048 493 5 0.8693181 376 5 0.4157470 311 5 0.643623 254 5 0.773709 429 2 0.000000 3 0 0.673349 180 5 0.5167198 498 5 0.6934705 329 5 0.7341671 294 6 0.732262 193 5 0.6125381 145 5 0.610833 174 5 0.8267081 0.7626967 0.7276837 0.8207748 0.8281503 0.8597282 0.8086939 0.8195494 0.8496315 0.7870140 0.8184957 0.7865385 0.8150962 0.8430664 0.8213073 0.8539716 NA 0.6407248 0.8708780 0.852326 0.797530 0.8573718 0.8853632 0.6985488 0.8124718 0.8589507 0.782450 0.8530594 0.920765 0.8798048 0.8243513 0.8316603 0.5148267 0.8043747 0.8124754 0.610291 0.771340 0.5846812 0.6911447 0.689239 0.707593 0.6443349 0.577855 2 0.8257543 0.8525707 -0.0286315 5 0.6945539 0.7355178 -4.0964e-02 6.1497e-01 0.1710747 insignificant 1.000000 1 insignificant 9.4957e-01 0.377541 insignificant 1.000000 1 insignificant 0.0372923 0.393327 lowCoverage 1 lowCoverage 0.8258968 0.6762246 0.15431736 5 0.7223473 0.5173139 0.2050333 1.3655e-11 1.0000000 weaklyHypermeth 5.2519e-10 1 weaklyHypermeth 4.1158e-04 0.99999989 weaklyHypermeth 1.5244e-02 1.000000 weaklyHypermeth 0.31802783 3.6588e-02 lowCoverage 8.4298e-01 lowCoverage 0.8260774 0.705727 0.1341811 5 0.8427385 0.697573 0.14516541 1.3964e-10 0.99997470 weaklyHypermeth 2.3274e-08 1.000000 weaklyHypermeth 4.1517e-08 0.99999865 weaklyHypermeth 1.0379e-05 1.000000 weaklyHypermeth 0.14523175 0.00212172 lowCoverage 0.21217 lowCoverage 0.8528610 0.6764179 0.17893439 5 0.7980178 0.5776497 0.22036811 3.2269e-08 0.9999809 weaklyHypermeth 1.0756e-06 1 weaklyHypermeth 4.0441e-03 0.9999999 weaklyHypermeth 9.8897e-02 1 weaklyHypermeth 0.2807355 5.5414e-02 lowCoverage 1.0000e+00 lowCoverage 0.8530515 0.705727 0.1605316 5 0.8140237 0.697573 1.1645e-01 1.1299e-10 0.9977727 weaklyHypermeth 2.8248e-08 1.00000 weaklyHypermeth 3.3449e-06 0.999985 weaklyHypermeth 8.3624e-04 1 weaklyHypermeth 0.1079395 0.0310385 lowCoverage 1.00000 lowCoverage 0.6766288 0.705727 -0.0250105 5 0.6035329 0.697573 -0.0940401 3.8684e-01 3.5534e-02 weaklyHypometh 1.0000e+00 5.3036e-01 insignificant 2.9149e-01 2.6326e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1727961 1.9137e-01 lowCoverage 1.0000000 lowCoverage chr12 47438849 47439849 114265 CCNT1 ENSG00000129315 0.9086651 260 6 0.8795369 223 6 0.8858447 105 5 0.9115210 229 5 0.9583333 84 5 0.758846 325 6 0.9409524 61 5 0.8510418 182 5 0.9032680 124 5 0.8836303 138 5 0.7748169 297 6 0.756944 34 4 0.8255437 232 5 0.90077 90 4 0.960771 143 5 0.6666667 29 2 0.550905 36 2 0.7526165 298 4 0.8630814 156 6 0.948178 243 5 0.827498 66 4 0.8984127 75 4 0.843939 172 5 0.914116 61 5 0.900476 79 4 0.7808071 321 6 0.786672 78 5 0.923611 40 4 0.931124 197 5 0.9032816 399 6 0.947185 272 5 0.8024209 346 6 0.8683286 209 5 0.808476 124 5 0.823549 165 4 0.816667 28 1 0.833333 81 5 0.9157118 301 5 0.9606026 155 4 0.9639245 260 5 0.938341 186 4 0.9481225 151 4 0.902767 228 4 0.8958504 0.8915850 0.8757572 0.9271641 0.9674497 0.8590769 0.9420901 0.8417465 0.8962060 0.8953647 0.9123355 0.7724646 0.9291210 0.9048340 0.9681581 0.6722130 0.525646 0.8730356 0.8730179 0.910632 0.893125 0.8863594 0.8672971 0.9173058 0.9131671 0.9335383 0.808553 0.8805928 0.919534 0.9363179 0.9409341 0.9358547 0.7973581 0.8053347 0.8491562 0.829978 0.762584 0.9030100 0.9421267 0.957843 0.920836 0.9351341 0.939311 3 0.9011858 0.9240266 -0.0214913 5 0.8303953 0.8144804 1.5915e-02 7.2906e-01 0.0660280 insignificant 1.000000 1 insignificant 8.3058e-01 0.130783 insignificant 1.000000 1 insignificant -0.0275320 0.354865 lowCoverage 1 lowCoverage 0.9027142 0.8458150 0.04346662 5 0.9021278 0.8555364 0.0465914 5.1873e-04 0.6009895 weaklyHypermeth 9.4314e-03 1 weaklyHypermeth 6.7186e-02 0.40873373 insignificant 1.0000e+00 1.000000 insignificant -0.00024774 9.9324e-01 lowCoverage 1.0000e+00 lowCoverage 0.9011858 0.939796 -0.0406775 5 0.8303953 0.953521 -0.12312544 9.9951e-01 0.00562097 weaklyHypometh 1.0000e+00 0.447197 insignificant 9.9991e-01 0.00558161 weaklyHypometh 1.0000e+00 0.714023 insignificant -0.09865494 0.00097206 lowCoverage 0.12151 lowCoverage 0.9253092 0.8458150 0.06260370 5 0.9085604 0.8555364 0.05302403 3.6058e-03 0.8470713 weaklyHypermeth 5.7235e-02 1 weaklyHypermeth 8.9569e-02 0.8477287 insignificant 1.0000e+00 1 insignificant 0.0272843 2.7347e-01 lowCoverage 1.0000e+00 lowCoverage 0.9240266 0.939796 -0.0142683 5 0.8144804 0.953521 -1.3904e-01 9.9226e-01 0.0574574 insignificant 1.0000e+00 1.00000 insignificant 9.9583e-01 0.084637 insignificant 1.0000e+00 1 insignificant -0.0711229 0.0033855 lowCoverage 0.27496 lowCoverage 0.8458150 0.939673 -0.0733548 5 0.8555364 0.945774 -0.0902378 9.9841e-01 4.7037e-03 weaklyHypometh 1.0000e+00 1.0453e-01 insignificant 9.9519e-01 1.8141e-02 weaklyHypometh 1.0000000 4.2188e-01 insignificant -0.0984072 1.0028e-03 lowCoverage 0.0748830 lowCoverage chr12 47653247 47654247 114279 WNT10B ENSG00000169884 0.1820175 73 7 0.1623171 142 7 0.3739833 212 7 0.0714286 11 0 0.2918027 155 7 0.272833 84 7 0.3871066 206 7 0.2257124 146 7 0.1939693 155 7 0.2251001 158 7 0.2705672 272 7 0.322672 186 7 0.3734767 200 7 NA 0 0 0.199085 265 7 0.2504737 220 7 0.120016 124 4 0.2750000 19 1 0.3945925 141 7 0.322658 67 7 0.196569 142 7 0.1527778 16 0 0.081585 180 7 0.138600 111 7 0.000000 9 0 0.1558179 269 7 0.246959 96 7 0.127664 59 6 0.214073 141 7 0.2107251 318 7 0.386840 205 7 0.1748366 114 7 0.0740564 168 7 0.036296 186 7 0.039216 60 3 0.000000 21 0 0.180736 46 4 0.0236977 178 7 0.0476190 29 3 0.0071429 86 7 0.366667 18 2 0.0416667 25 2 0.253333 16 1 0.2089501 0.1845319 0.4133977 0.0781250 0.3156250 0.2981103 0.4311887 0.2494953 0.2167015 0.2393621 0.2873098 0.3519969 0.4097117 NA 0.2260382 0.2819351 0.150674 0.2758628 0.4433753 0.357543 0.216299 0.1549223 0.0960992 0.1471749 0.0349535 0.1859760 0.253574 0.1465774 0.222605 0.2369287 0.4135356 0.2051164 0.0897000 0.0425116 0.0548448 0.000000 0.210938 0.0276914 0.0520833 0.009375 0.362500 0.0729167 0.221354 0 0.2193230 0.1873494 0.0637200 7 0.2701436 0.2024475 6.7696e-02 2.0241e-05 0.9996676 weaklyHypermeth 0.020241 1 weaklyHypermeth 1.2625e-05 0.999994 weaklyHypermeth 0.012625 1 weaklyHypermeth 0.0848036 0.021217 weaklyHypermeth 1 insignificant 0.2193230 0.0698027 0.15732102 7 0.2701436 0.0508070 0.2193366 9.0963e-15 0.9751981 weaklyHypermeth 4.3316e-13 1 weaklyHypermeth 3.3356e-08 0.99972826 weaklyHypermeth 3.0324e-06 1.000000 weaklyHypermeth 0.19967395 6.6645e-05 lowCoverage 3.9203e-03 lowCoverage 0.2193230 0.074713 0.2144328 2 0.2701436 0.069499 0.20064447 3.6709e-11 0.99997134 lowCoverage 7.3418e-09 1.000000 lowCoverage 5.7078e-06 0.99999970 lowCoverage 9.5129e-04 1.000000 lowCoverage 0.11538856 0.18186653 lowCoverage 1.00000 lowCoverage 0.1873494 0.0698027 0.09393565 7 0.2024475 0.0508070 0.15164054 1.2891e-07 0.4928223 weaklyHypermeth 4.0284e-06 1 weaklyHypermeth 2.5202e-04 0.8625845 weaklyHypermeth 1.0081e-02 1 weaklyHypermeth 0.1148704 8.7222e-03 lowCoverage 2.8136e-01 lowCoverage 0.1873494 0.074713 0.1435783 2 0.2024475 0.069499 1.3295e-01 1.2485e-04 0.9982287 lowCoverage 7.3441e-03 1.00000 lowCoverage 3.9169e-03 0.999709 lowCoverage 2.4480e-01 1 lowCoverage 0.0305850 0.7023593 lowCoverage 1.00000 lowCoverage 0.0698027 0.074713 -0.0162802 2 0.0508070 0.069499 -0.0186921 7.0065e-01 5.0777e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.4833e-01 6.9401e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0842854 3.1370e-01 lowCoverage 1.0000000 lowCoverage chr12 48183457 48184457 114299 SPATS2 ENSG00000123352 0.7558245 261 8 0.7793773 200 9 0.8271469 140 11 0.8058647 183 11 0.7613636 96 9 0.818806 263 11 0.8355861 160 11 0.8639427 131 10 0.8231019 108 8 0.8827424 115 8 0.7833335 237 11 0.715774 66 6 0.8477593 130 8 0.73333 14 2 0.814698 107 8 0.9136270 69 6 0.801540 496 8 0.8393861 208 8 0.8796397 126 6 0.850437 260 8 0.733912 176 7 0.8083478 91 6 0.876707 133 6 0.827063 107 6 0.839784 114 11 0.7760773 268 11 0.850728 108 6 0.908088 126 4 0.941506 66 4 0.8356061 222 11 0.822578 230 11 0.8401679 313 8 0.7293055 135 7 0.798301 138 8 0.712049 261 10 0.754092 125 9 0.856651 181 7 0.5489446 171 11 0.8255028 305 11 0.7651843 331 11 0.827784 229 8 0.8462606 198 6 0.824821 348 11 0.8700047 0.7375981 0.8419058 0.8220231 0.8669466 0.8274046 0.8077787 0.8454285 0.8108032 0.8739023 0.8454360 0.8478199 0.8626688 0.8586077 0.9028635 0.8336065 0.901332 0.8621079 0.8783977 0.843453 0.806977 0.8619897 0.8363917 0.8468292 0.8061331 0.7832150 0.862456 0.8661211 0.933413 0.8404842 0.8623160 0.8291979 0.7787719 0.8506562 0.8664606 0.738653 0.865150 0.8149235 0.9096062 0.902374 0.889322 0.8724441 0.907963 2 0.8492582 0.8306039 0.0199564 11 0.8247842 0.7890305 3.5754e-02 4.3566e-02 0.5126629 weaklyHypermeth 1.000000 1 insignificant 7.1302e-01 0.404919 insignificant 1.000000 1 insignificant -0.0217163 0.278947 insignificant 1 insignificant 0.8497024 0.7240356 0.11670622 11 0.8361283 0.6760444 0.1600839 7.1336e-11 0.9935339 weaklyHypermeth 2.5477e-09 1 weaklyHypermeth 4.7078e-03 0.97726907 weaklyHypermeth 1.1482e-01 1.000000 insignificant 0.08344032 1.0933e-01 insignificant 1.0000e+00 insignificant 0.8492582 0.850461 -0.0008447 11 0.8247842 0.789038 0.03574617 1.5025e-02 0.14532808 inconclusive 4.5378e-01 1.000000 insignificant 2.0433e-01 0.17353531 insignificant 1.0000e+00 1.000000 insignificant -0.00124639 0.94581394 insignificant 1.00000 insignificant 0.8321355 0.7240356 0.08560746 11 0.8304575 0.6760444 0.15441313 6.0325e-09 0.8113753 weaklyHypermeth 2.3202e-07 1 weaklyHypermeth 1.4155e-03 0.9211038 weaklyHypermeth 4.0442e-02 1 weaklyHypermeth 0.1051567 5.6971e-02 insignificant 1.0000e+00 insignificant 0.8306039 0.850461 -0.0295591 11 0.7890305 0.789038 -7.5771e-06 8.6053e-04 0.0014735 weaklyHypometh 4.0978e-02 0.33363 weaklyHypometh 9.0696e-02 0.207294 insignificant 1.0000e+00 1 insignificant 0.0204700 0.3471257 insignificant 1.00000 insignificant 0.7240356 0.850852 -0.1146586 11 0.6760444 0.800163 -0.1241184 9.9690e-01 3.4122e-04 weaklyHypometh 1.0000e+00 9.4784e-03 weaklyHypometh 9.7323e-01 3.2006e-02 weaklyHypometh 1.0000000 6.4012e-01 insignificant -0.0846867 1.0698e-01 insignificant 1.0000000 insignificant chr12 48337835 48338835 114308 PRPF40B ENSG00000110844 0.9807552 314 7 0.9310286 261 7 0.9332555 229 7 0.9809963 367 7 0.9407814 145 7 0.950616 320 7 0.9581487 192 7 0.9774280 230 7 0.9063642 220 7 0.9613240 222 7 0.8170983 229 7 0.859505 150 7 0.9523123 335 7 0.90952 99 7 0.943393 352 7 0.8032468 102 5 0.977324 100 5 0.9586983 398 7 0.9763688 145 7 0.957560 257 7 0.971429 64 4 0.9747783 143 7 0.781246 165 7 0.927083 89 7 0.942481 130 7 0.8518126 256 7 0.905213 99 7 0.757853 74 7 0.917292 255 7 0.9606531 297 7 0.987028 175 7 0.9164294 229 7 0.9804354 131 7 0.949636 153 7 1.000000 92 5 0.984127 53 5 0.814815 77 7 0.9687683 267 7 0.9655253 454 7 0.9730648 397 7 0.947186 372 7 0.9585725 342 7 0.958526 367 7 0.9807835 0.9269664 0.9379436 0.9802267 0.9404292 0.9508189 0.9557979 0.9752405 0.9084111 0.9616323 0.9286931 0.8566019 0.9523344 0.9201923 0.9443052 0.8325799 0.975100 0.9597207 0.9747054 0.957376 0.965934 0.9730535 0.8976429 0.9871795 0.9461340 0.9557602 0.904990 0.8588828 0.921758 0.9647107 0.9836989 0.9142124 0.9754391 0.9526659 0.9953730 0.984432 1.000000 0.9636021 0.9634492 0.973423 0.952076 0.9586074 0.955945 7 0.9498607 0.9387342 0.0089886 7 0.8314111 0.8747476 -4.3336e-02 2.2032e-01 0.6732611 insignificant 1.000000 1 insignificant 8.3237e-01 0.355501 insignificant 1.000000 1 insignificant 0.0260116 0.301141 insignificant 1 insignificant 0.9498607 0.9702073 -0.02270975 7 0.8314111 0.9263369 -0.0949258 9.9610e-01 0.0156120 weaklyHypometh 1.0000e+00 1 insignificant 1.0000e+00 0.00014340 weaklyHypometh 1.0000e+00 0.035849 weaklyHypometh -0.01584377 6.1564e-01 insignificant 1.0000e+00 insignificant 0.9500643 0.961698 -0.0115035 7 0.9501842 0.960519 -0.01033435 9.2782e-01 0.24785413 insignificant 1.0000e+00 1.000000 insignificant 9.2611e-01 0.22806489 insignificant 1.0000e+00 1.000000 insignificant -0.02678854 0.04072911 weaklyHypometh 1.00000 insignificant 0.9387652 0.9689521 -0.02740123 7 0.8886645 0.8234106 0.06525394 9.9714e-01 0.0073729 weaklyHypometh 1.0000e+00 1 insignificant 9.9956e-01 0.0048613 weaklyHypometh 1.0000e+00 1 insignificant -0.0418554 2.5894e-01 insignificant 1.0000e+00 insignificant 0.9405488 0.961698 -0.0203189 7 0.9384870 0.960519 -2.2031e-02 9.8239e-01 0.1039650 insignificant 1.0000e+00 1.00000 insignificant 9.5798e-01 0.419411 insignificant 1.0000e+00 1 insignificant -0.0528002 0.0332245 weaklyHypometh 1.00000 insignificant 0.9726206 0.961698 0.0105225 7 0.9729565 0.960519 0.0124380 1.3265e-01 9.6725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3858e-02 9.9940e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant -0.0109448 7.1271e-01 insignificant 1.0000000 insignificant chr12 48753208 48754208 114345 ACCN2 ENSG00000110881 0.8349440 130 4 0.7201657 119 7 0.8102564 97 7 0.8818945 198 7 0.7932540 70 7 0.899930 298 7 0.7740942 72 7 0.7996599 70 5 0.7171786 96 7 0.8240741 87 7 0.8062500 150 7 0.896259 83 7 0.8085714 89 7 0.90879 45 3 0.873299 70 7 0.7600000 10 1 0.944231 35 2 0.7309419 213 7 0.8347222 42 3 0.828091 176 7 0.931045 85 6 0.8220129 110 7 0.910985 88 7 0.800893 75 8 0.946412 200 6 0.7884972 160 7 0.665285 82 5 0.894643 67 6 0.763348 92 7 0.9161485 109 7 0.927827 112 7 0.8834219 183 7 0.7458364 86 5 0.691547 128 5 1.000000 73 2 0.768010 74 4 0.671252 93 7 0.6464983 154 7 0.8944805 99 4 0.8823144 219 7 0.782430 126 7 0.8066898 209 7 0.859210 105 7 0.8476898 0.8292252 0.7990874 0.8376418 0.8182002 0.8681689 0.8214935 0.8043987 0.8206551 0.9262712 0.8855932 0.9114205 0.7307345 0.8539982 0.8768664 0.9101332 0.853994 0.8161632 0.8506338 0.802048 0.915300 0.7815567 0.9545455 0.8928773 0.9154403 0.8796650 0.820360 0.8342615 0.821630 0.8982301 0.8835351 0.8612794 0.9160362 0.6459604 0.7797959 0.844883 0.720039 0.5298632 0.8833429 0.836319 0.791137 0.8272007 0.761498 1 0.8595349 0.8879882 -0.0316707 7 0.6620619 0.8061837 -1.4412e-01 9.9987e-01 0.0597559 insignificant 1.000000 1 insignificant 9.9948e-01 0.017597 weaklyHypometh 1.000000 1 insignificant -0.0318795 0.280979 insignificant 1 insignificant 0.8599349 0.7138158 0.13886635 7 0.7356244 0.6171133 0.1185111 2.4090e-07 0.9999378 weaklyHypermeth 6.6916e-06 1 weaklyHypermeth 9.1976e-02 0.99690195 insignificant 1.0000e+00 1.000000 insignificant 0.06847298 2.5788e-01 insignificant 1.0000e+00 insignificant 0.8607359 0.839050 0.0270198 7 0.7356244 0.876701 -0.14107697 2.2552e-01 0.59142418 insignificant 1.0000e+00 1.000000 insignificant 4.2585e-01 0.67770847 insignificant 1.0000e+00 1.000000 insignificant -0.02269443 0.40880565 insignificant 1.00000 insignificant 0.8879056 0.7138158 0.17989423 7 0.7846485 0.6171133 0.16753524 3.0453e-08 0.9999999 weaklyHypermeth 1.0501e-06 1 weaklyHypermeth 7.3788e-03 0.9999881 weaklyHypermeth 1.6041e-01 1 insignificant 0.1003525 1.2647e-01 insignificant 1.0000e+00 insignificant 0.8892989 0.839050 0.0610505 7 0.8957596 0.876701 1.9058e-02 3.6973e-02 0.9947077 weaklyHypermeth 9.2432e-01 1.00000 insignificant 6.4940e-02 0.999752 insignificant 1.0000e+00 1 insignificant 0.0091851 0.7850682 insignificant 1.00000 insignificant 0.7161716 0.838838 -0.1146304 7 0.6942525 0.861289 -0.1670366 9.9513e-01 6.4096e-03 weaklyHypometh 1.0000e+00 1.3081e-01 insignificant 9.9024e-01 3.3518e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0911674 1.5584e-01 insignificant 1.0000000 insignificant chr12 48753564 48754564 114346 ACCN2 ENSG00000110881 0.8302495 187 5 0.7675573 202 8 0.8092487 126 8 0.9098129 233 8 0.9169719 78 8 0.926708 353 8 0.8481074 135 8 0.7583562 96 6 0.8883275 130 8 0.9687500 75 8 0.8196200 229 8 0.793651 108 8 0.8856656 107 8 0.98571 34 2 0.918478 126 8 0.8000000 19 3 0.916209 61 4 0.8524917 164 8 0.7939847 66 4 0.869187 197 8 0.875389 99 7 0.8600198 73 7 0.896536 115 8 0.890224 84 8 0.847262 96 6 0.8746575 207 8 0.745360 71 5 0.957143 78 7 0.861374 123 8 0.9186435 182 8 0.917726 178 8 0.8836814 283 8 0.7714046 127 8 0.638074 97 6 1.000000 123 5 0.887224 138 5 0.817086 136 8 0.6127247 242 8 0.8678778 158 5 0.8739905 327 8 0.788542 149 8 0.8132282 212 8 0.846883 171 8 0.8263767 0.8770895 0.8425940 0.8844491 0.9074355 0.9058909 0.8677924 0.7583986 0.9106115 0.9932950 0.8886237 0.7685869 0.8423797 0.9344015 0.9339265 0.9390559 0.879211 0.8464231 0.8198115 0.867616 0.798478 0.8490604 0.8581252 0.8460666 0.9334675 0.8446269 0.755074 0.9479475 0.819660 0.9079773 0.8857682 0.8677242 0.8025592 0.6222708 0.9373822 0.965294 0.786434 0.5165749 0.8463069 0.854318 0.772676 0.8353141 0.776747 3 0.8800440 0.8821676 -0.0021591 8 0.7857998 0.7894268 -3.6270e-03 7.3122e-01 0.2953013 insignificant 1.000000 1 insignificant 7.9883e-01 0.042782 weaklyHypometh 1.000000 1 insignificant -0.0143802 0.497487 insignificant 1 insignificant 0.8806902 0.7775203 0.11892515 8 0.8840247 0.7402828 0.1437420 1.1713e-07 0.9978146 weaklyHypermeth 3.4450e-06 1 weaklyHypermeth 9.8497e-02 0.98312472 insignificant 1.0000e+00 1.000000 insignificant 0.07520237 2.7429e-01 insignificant 1.0000e+00 insignificant 0.8806902 0.832842 0.0496716 8 0.8840247 0.841598 0.04242657 1.6067e-03 0.82238558 weaklyHypermeth 8.0852e-02 1.000000 weaklyHypermeth 3.2048e-03 0.89669976 weaklyHypermeth 1.6024e-01 1.000000 insignificant 0.02485026 0.28105709 insignificant 1.00000 insignificant 0.8827238 0.7775203 0.11696676 8 0.8881051 0.7402828 0.14782236 1.0955e-05 0.9997089 weaklyHypermeth 2.8829e-04 1 weaklyHypermeth 2.1727e-02 0.9989294 weaklyHypermeth 3.8799e-01 1 insignificant 0.0895826 2.0258e-01 insignificant 1.0000e+00 insignificant 0.8827238 0.832842 0.0526000 8 0.8881051 0.841598 4.6507e-02 2.0671e-02 0.9884318 weaklyHypermeth 6.2641e-01 1.00000 insignificant 1.8172e-02 0.999957 weaklyHypermeth 6.4900e-01 1 insignificant 0.0392305 0.1039156 insignificant 1.00000 insignificant 0.7775203 0.832842 -0.0614609 8 0.7402828 0.841598 -0.1013154 8.9759e-01 7.4595e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5955e-01 6.9411e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0503521 4.5247e-01 insignificant 1.0000000 insignificant chr12 48864970 48865970 114352 LASS5 ENSG00000139624 0.6386124 101 3 0.5688361 118 5 0.7966667 23 2 0.7607843 47 4 0.9095238 22 3 0.810827 102 5 0.7260623 64 5 0.7218315 69 5 0.7585498 46 5 0.6528571 25 3 0.6157407 84 5 0.766667 12 0 0.6729497 39 3 0.83571 27 3 0.764615 49 5 0.8888889 7 0 1.000000 2 0 0.7675519 105 5 0.5752525 60 5 0.802308 72 5 0.622857 32 4 0.8750000 8 0 0.609788 44 3 0.815000 38 5 0.885714 68 4 0.5993329 96 5 0.791111 40 5 0.842857 18 1 0.835256 76 3 0.5716011 90 5 0.718056 72 5 0.8230159 79 5 0.6774603 72 5 0.735014 53 5 0.570433 89 5 0.950000 12 2 0.647276 56 5 0.6003968 67 5 0.8529101 69 4 0.6557134 103 5 0.882759 92 5 0.7222222 43 2 0.812781 76 4 0.6656776 0.6627475 0.8032787 0.7171328 0.8926620 0.7540612 0.7397166 0.7138654 0.7599177 0.7224824 0.7249545 0.7267760 0.7742649 0.7306792 0.7058988 0.8001850 NA 0.7951320 0.7061600 0.769231 0.607728 0.9067825 0.6695290 0.7930328 0.8126464 0.6721130 0.775046 0.8946136 0.770912 0.6658408 0.7183796 0.7900078 0.6488421 0.7014281 0.6472365 0.915622 0.790942 0.6383685 0.7822881 0.776267 0.807801 0.7905282 0.806015 0 0.7383613 0.7488654 -0.0019685 5 0.6830934 0.6585992 2.4494e-02 3.5949e-01 0.4613286 insignificant 1.000000 1 insignificant 5.3265e-01 0.489941 insignificant 1.000000 1 insignificant 0.0025794 0.951703 lowCoverage 1 lowCoverage 0.7383613 0.7048711 0.03976370 5 0.6830934 0.6080821 0.0750113 3.0096e-04 0.1962290 weaklyHypermeth 5.5733e-03 1 weaklyHypermeth 1.3744e-02 0.46899285 weaklyHypermeth 2.6948e-01 1.000000 insignificant 0.05494855 3.9833e-01 lowCoverage 1.0000e+00 lowCoverage 0.7383613 0.783290 -0.0584693 4 0.6830934 0.679321 0.00377242 5.7718e-01 0.01224037 lowCoverage 1.0000e+00 0.720022 lowCoverage 7.2542e-01 0.11378239 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.03356504 0.51483057 lowCoverage 1.00000 lowCoverage 0.7488654 0.7048711 0.04026138 5 0.6585992 0.6080821 0.05051710 1.2560e-02 0.4137111 weaklyHypermeth 1.7942e-01 1 insignificant 5.8486e-02 0.5991327 insignificant 8.9978e-01 1 insignificant 0.0523691 4.4429e-01 lowCoverage 1.0000e+00 lowCoverage 0.7488654 0.783290 -0.0613394 4 0.6585992 0.679321 -2.0722e-02 7.7474e-01 0.0131161 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.6034e-01 0.078757 lowCoverage 1.0000e+00 1 lowCoverage -0.0361445 0.5206751 lowCoverage 1.00000 lowCoverage 0.7048711 0.783290 -0.0989747 4 0.6080821 0.679321 -0.0712388 9.9872e-01 3.0348e-02 lowCoverage 1.0000e+00 4.7418e-01 lowCoverage 9.9976e-01 1.4381e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0885136 2.3872e-01 lowCoverage 1.0000000 lowCoverage chr12 48951653 48952653 114361 ENSG00000212496 0.7171485 123 4 0.5663178 241 6 0.5254121 77 4 0.6385508 82 4 0.5238095 46 4 0.572897 156 6 0.5511085 104 6 0.4374955 161 6 0.7437500 73 5 0.5478070 55 3 0.6045072 199 6 0.679167 34 3 0.5784382 83 5 0.64424 77 4 0.711932 88 6 0.7291667 48 3 0.379277 207 3 0.4131944 72 2 0.6219782 130 4 0.438426 126 4 0.770833 25 3 1.0000000 2 0 0.462910 98 6 0.597375 62 6 0.581252 74 5 0.6774294 173 6 0.515306 73 5 0.512037 54 3 0.534382 158 6 0.5749068 170 6 0.694233 126 6 0.5168386 130 6 0.6386473 149 6 0.349457 96 6 0.683619 131 6 0.288889 14 1 0.460750 126 7 0.5979272 144 6 0.6342063 129 4 0.5829848 155 6 0.475541 97 6 0.4139772 83 4 0.593442 108 6 0.6858080 0.6517416 0.6934041 0.7048774 0.6263039 0.6711733 0.7080256 0.6760499 0.7163265 0.7359449 0.6818682 0.7635596 0.6782027 0.6972638 0.7194464 0.7899660 0.556417 0.7259070 0.7251318 0.685653 0.761905 0.7223980 0.6839741 0.8978034 0.6465964 0.7398252 0.594752 0.6675170 0.648240 0.6988551 0.6652656 0.6946825 0.6926945 0.4777975 0.7611735 0.409070 0.648147 0.7239508 0.7239942 0.690559 0.739394 0.7101807 0.726545 3 0.6361546 0.6550218 -0.0107674 6 0.5518062 0.5227292 2.9077e-02 5.6109e-01 0.4816486 insignificant 1.000000 1 insignificant 5.8099e-01 0.755365 insignificant 1.000000 1 insignificant -0.0385608 0.445323 lowCoverage 1 lowCoverage 0.6365730 0.6303030 0.00638487 6 0.5700123 0.4787113 0.0913010 7.9159e-01 0.8070173 insignificant 1.0000e+00 1 insignificant 4.1108e-01 0.98473309 insignificant 1.0000e+00 1.000000 insignificant 0.07801619 3.0781e-01 lowCoverage 1.0000e+00 lowCoverage 0.6369515 0.671329 -0.0305311 4 0.5633517 0.456219 0.10713295 1.1145e-01 0.59892232 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.3347e-01 0.60273223 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.04120086 0.41494464 lowCoverage 1.00000 lowCoverage 0.6555944 0.6303030 0.02136360 6 0.5662900 0.4787113 0.08757874 3.9704e-01 0.8633996 insignificant 1.0000e+00 1 insignificant 3.6941e-01 0.9783577 insignificant 1.0000e+00 1 insignificant 0.1165770 1.7254e-01 lowCoverage 1.0000e+00 lowCoverage 0.6580588 0.671329 -0.0138211 4 0.5817267 0.456219 1.2551e-01 7.1185e-02 0.2873492 lowCoverage 1.0000e+00 1.00000 lowCoverage 1.8805e-01 0.475323 lowCoverage 1.0000e+00 1 lowCoverage 0.0797617 0.2042704 lowCoverage 1.00000 lowCoverage 0.6348228 0.671329 -0.0354774 4 0.5805669 0.456219 0.1243481 3.6048e-01 6.2880e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6056e-01 3.7472e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0368153 6.4864e-01 insignificant 1.0000000 insignificant chr12 50516738 50517738 114404 FIGNL2 ENSG00000205432 0.6591931 229 7 0.6455449 179 7 0.7211934 170 7 0.5073977 292 7 0.5981270 99 7 0.609502 401 7 0.7012552 150 7 0.5684199 210 7 0.6613751 244 7 0.6287470 220 7 0.6997640 165 7 0.703741 116 7 0.3670384 277 7 0.69820 160 7 0.572481 206 7 0.6805950 113 7 0.660038 59 5 0.5245049 324 7 0.1824006 92 5 0.491939 258 7 0.783533 68 5 0.1752431 179 7 0.741308 149 7 0.438875 133 7 0.643756 133 7 0.5170459 210 7 0.599423 141 7 0.796684 134 7 0.545135 165 7 0.4589168 233 7 0.498651 189 7 0.7060520 242 7 0.4678973 193 7 0.701863 89 6 0.802778 135 4 0.738095 19 0 0.630684 135 7 0.5387981 207 7 0.1476039 284 7 0.3686230 188 7 0.216770 204 7 0.4897748 171 7 0.295644 211 7 0.6509112 0.6599728 0.6976118 0.5263949 0.5811641 0.6361816 0.7648440 0.5927740 0.6561837 0.6257670 0.6873773 0.7213967 0.3768133 0.6729794 0.5573486 0.6151725 0.553461 0.5200583 0.1766990 0.493406 0.701328 0.1917936 0.7050073 0.5207405 0.6138894 0.5205583 0.615189 0.7642677 0.565532 0.5221378 0.4038649 0.6989766 0.4397433 0.6884544 0.6214133 0.752458 0.571314 0.3872242 0.1304398 0.251183 0.199471 0.4332363 0.292508 7 0.5913219 0.5420040 0.0374169 7 0.6363861 0.5461114 9.0275e-02 2.1240e-01 0.9546239 insignificant 1.000000 1 insignificant 5.4204e-01 0.853060 insignificant 1.000000 1 insignificant 0.0186877 0.755080 insignificant 1 insignificant 0.5913219 0.5475578 0.04110434 7 0.6363861 0.6295420 0.0068441 4.5871e-03 0.0047253 weaklyHypermeth 6.9502e-02 1 weaklyHypermeth 4.4056e-01 0.28206936 insignificant 1.0000e+00 1.000000 insignificant -0.05261304 3.9975e-01 insignificant 1.0000e+00 insignificant 0.5913219 0.225898 0.3482552 7 0.6363861 0.352535 0.28385087 1.6350e-18 1.00000000 hypermethylated 5.4500e-16 1.000000 hypermethylated 5.9176e-09 1.00000000 hypermethylated 1.9725e-06 1.000000 hypermethylated 0.29038971 0.00447352 weaklyHypermeth 0.34412 insignificant 0.5420040 0.5475578 0.00735139 7 0.5461114 0.6295420 -0.08343062 1.8272e-02 0.0177762 weaklyHypermeth 2.5030e-01 1 insignificant 3.0942e-01 0.3803257 insignificant 1.0000e+00 1 insignificant -0.0713007 3.4288e-01 insignificant 1.0000e+00 insignificant 0.5420040 0.225898 0.3045323 7 0.5461114 0.352535 1.9358e-01 4.4772e-11 0.9999227 hypermethylated 1.4924e-08 1.00000 hypermethylated 2.3120e-07 0.999994 hypermethylated 7.7067e-05 1 hypermethylated 0.2717021 0.0060115 weaklyHypermeth 0.42939 insignificant 0.5475578 0.225898 0.2898631 7 0.6295420 0.352535 0.2770067 6.4885e-08 1.0000e+00 hypermethylated 2.1628e-05 1.0000e+00 hypermethylated 2.3407e-06 1.0000e+00 hypermethylated 0.0023407 1.0000e+00 hypermethylated 0.3430027 2.1268e-03 weaklyHypermeth 0.1012744 insignificant chr12 50724182 50725182 114430 NR4A1 ENSG00000123358 0.9418910 146 5 0.8778898 396 7 0.8042620 107 7 0.9732304 128 5 0.9071429 68 6 0.915908 245 7 0.8809524 120 7 0.9297542 110 7 0.8187928 120 7 0.8513945 93 7 0.9323213 317 7 0.728716 45 4 0.9021360 126 7 0.82778 23 1 0.887155 81 7 0.9444444 19 2 0.815530 39 4 0.8510611 157 5 0.9251742 154 5 0.915763 223 7 0.890884 105 7 0.9062865 81 4 0.817456 191 7 0.913265 130 7 0.909164 61 4 0.9325085 331 7 0.827926 105 7 0.843795 56 5 0.847539 177 5 0.9363377 358 7 0.911026 337 7 0.9239752 288 7 0.0318307 242 7 0.183972 124 5 0.142857 318 5 0.122727 35 4 0.034208 226 7 0.3375672 377 7 0.9410939 198 7 0.9138288 171 7 0.946177 101 5 0.9260810 127 5 0.845957 154 7 0.9231582 0.9404768 0.8735555 0.9675425 0.9430556 0.9127925 0.8456790 0.9220490 0.8354834 0.9066970 0.9261544 0.7243967 0.9277761 NA 0.9375058 0.9050926 0.821517 0.8346333 0.8829570 0.924933 0.918771 0.9096416 0.8986926 0.9634590 0.9096641 0.9550825 0.807290 0.9026625 0.830282 0.9578054 0.9204313 0.9277630 0.0358932 0.1724593 0.2847222 0.141474 0.051561 0.3919804 0.9338105 0.911893 0.948548 0.9412677 0.916278 4 0.8914244 0.9094187 -0.0183180 7 0.8930350 0.9011769 -8.1418e-03 7.2037e-01 0.2300957 insignificant 1.000000 1 insignificant 2.4577e-01 0.452954 insignificant 1.000000 1 insignificant -0.0067820 0.711698 insignificant 1 insignificant 0.8914244 0.1527988 0.71711360 7 0.8930350 0.1734527 0.7195823 5.2926e-68 1.0000000 hypermethylated 5.2926e-65 1 hypermethylated 2.0686e-16 1.00000000 hypermethylated 2.0686e-13 1.000000 hypermethylated 0.73937109 5.8173e-06 hypermethylated 4.1552e-04 hypermethylated 0.8914244 0.900133 -0.0026954 5 0.8930350 0.911181 -0.01814577 8.8611e-01 0.21695547 insignificant 1.0000e+00 1.000000 insignificant 9.2194e-01 0.21017965 insignificant 1.0000e+00 1.000000 insignificant -0.03306269 0.17617148 insignificant 1.00000 insignificant 0.9094187 0.1527988 0.73735747 7 0.9011769 0.1734527 0.72772418 1.6372e-48 1.0000000 hypermethylated 1.6372e-45 1 hypermethylated 8.8017e-15 1.0000000 hypermethylated 8.8017e-12 1 hypermethylated 0.7461531 6.6992e-06 hypermethylated 5.5827e-04 hypermethylated 0.9094187 0.900133 0.0160256 5 0.9011769 0.911181 -1.0004e-02 3.1163e-01 0.3691178 insignificant 1.0000e+00 1.00000 insignificant 6.5143e-01 0.369830 insignificant 1.0000e+00 1 insignificant -0.0262806 0.2635875 insignificant 1.00000 insignificant 0.1527988 0.900133 -0.7135532 5 0.1734527 0.911181 -0.7377281 1.0000e+00 3.3384e-25 hypomethylated 1.0000e+00 3.3384e-22 hypomethylated 1.0000e+00 4.0859e-09 hypomethylated 1.0000000 4.0859e-06 hypomethylated -0.7724338 2.3204e-06 hypomethylated 0.0023204 hypomethylated chr12 50741539 50742539 114431 NR4A1 ENSG00000123358 0.8284470 110 6 0.6658431 208 7 0.6970726 200 6 0.8571429 68 6 0.7097803 67 7 0.783925 181 7 0.7422018 110 7 0.7394117 188 8 0.7496500 136 7 0.8064138 103 7 0.7951463 316 8 0.699702 43 6 0.7157272 178 6 0.64444 39 2 0.552761 141 6 0.8717949 49 4 0.347186 48 6 0.5645735 60 5 0.6613362 230 6 0.611052 124 6 0.803438 107 7 0.3186813 55 2 0.751219 138 8 0.585882 78 7 0.590573 98 5 0.7675129 338 8 0.845124 108 8 0.739130 64 4 0.644061 181 6 0.8176092 269 8 0.765548 296 8 0.8474737 184 6 0.5271912 201 6 0.756589 131 8 0.737500 104 4 0.548958 48 6 0.644544 113 6 0.7092087 243 8 0.1921920 103 7 0.4700505 136 7 0.257823 45 5 0.5461828 71 6 0.425184 89 7 0.7772873 0.6475904 0.6540724 0.8600712 0.7596772 0.7133647 0.6723290 0.6934459 0.7281497 0.8172899 0.7908275 0.5323755 0.6406593 0.8445644 0.5548081 0.7944142 0.295681 0.5473770 0.6621773 0.599830 0.749125 0.2303764 0.7103182 0.5996209 0.5948373 0.7576808 0.789847 0.7344245 0.697442 0.7760942 0.6641124 0.8815723 0.5208986 0.7494009 0.6034372 0.458429 0.704818 0.7322134 0.1630626 0.386879 0.177203 0.4207246 0.369338 4 0.6918045 0.7312109 -0.0329343 6 0.6774958 0.6640924 1.3403e-02 9.9082e-01 0.1648251 insignificant 1.000000 1 insignificant 9.6508e-01 0.616912 insignificant 1.000000 1 insignificant -0.0041737 0.936359 insignificant 1 insignificant 0.6926040 0.6500000 0.04339679 6 0.7527731 0.5988442 0.1539290 6.5704e-02 0.5943646 insignificant 8.3169e-01 1 insignificant 7.5137e-02 0.49660047 insignificant 1.0000e+00 1.000000 insignificant 0.04818204 3.4180e-01 insignificant 1.0000e+00 insignificant 0.6926040 0.292793 0.4051657 6 0.7527731 0.385438 0.36733495 1.0639e-24 1.00000000 hypermethylated 1.0639e-21 1.000000 hypermethylated 5.2709e-11 0.99999992 hypermethylated 5.2709e-08 1.000000 hypermethylated 0.32389408 0.00514471 weaklyHypermeth 0.34848 insignificant 0.7315927 0.6500000 0.07878453 7 0.7378804 0.5988442 0.13903625 7.4963e-03 0.6510246 weaklyHypermeth 1.1188e-01 1 insignificant 9.3188e-02 0.5648956 insignificant 1.0000e+00 1 insignificant 0.0523558 3.9121e-01 insignificant 1.0000e+00 insignificant 0.7315927 0.292793 0.4272913 7 0.7378804 0.385438 3.5244e-01 1.4039e-21 0.9999545 hypermethylated 1.4039e-18 1.00000 hypermethylated 4.0239e-08 0.999968 hypermethylated 2.0119e-05 1 hypermethylated 0.3280678 0.0035745 weaklyHypermeth 0.27496 insignificant 0.6500000 0.292793 0.3605940 7 0.5988442 0.385438 0.2134060 6.0740e-08 1.0000e+00 hypermethylated 2.1628e-05 1.0000e+00 hypermethylated 1.4920e-05 9.9990e-01 hypermethylated 0.0074599 1.0000e+00 hypermethylated 0.2757120 9.8437e-03 weaklyHypermeth 0.2907805 insignificant chr12 51821783 51822783 114463 ENSG00000212646 0.8583100 407 9 0.7865009 371 13 0.8108208 342 13 0.8383659 244 9 0.8143366 152 9 0.811308 493 9 0.7691155 188 9 0.7482900 169 6 0.7069589 181 9 0.7977335 122 8 0.8529888 295 9 0.857481 167 9 0.7714806 214 9 0.86765 91 4 0.748775 187 9 0.7209019 160 9 0.792218 2302 7 0.8501821 265 9 0.7819416 167 9 0.889211 426 9 0.854464 64 5 0.8161330 126 9 0.848417 258 13 0.879734 134 6 0.836533 86 9 0.8822761 310 13 0.730841 154 6 0.888086 112 6 0.893935 90 6 0.8808971 396 13 0.822962 273 12 0.8171935 562 13 0.8142263 313 12 0.704477 127 8 0.683056 126 8 0.735714 66 8 0.831570 267 6 0.8061550 399 13 0.8665685 381 9 0.7908361 286 9 0.890569 262 9 0.8586151 280 9 0.898835 308 12 0.8156300 0.7958938 0.7812653 0.8856361 0.8385139 0.8080896 0.7807093 0.7760895 0.7816061 0.8039252 0.8790067 0.8400958 0.8341534 0.8485098 0.7897689 0.7658493 0.845153 0.8075350 0.8190626 0.858521 0.861728 0.8361494 0.8681648 0.8643878 0.8451812 0.8863282 0.793746 0.8620766 0.886925 0.8887995 0.8331126 0.8410384 0.7732483 0.7254053 0.7552464 0.669880 0.801319 0.8686906 0.8407967 0.831770 0.915431 0.8320576 0.898367 6 0.8859283 0.8471735 -0.0182706 9 0.8319195 0.8550570 -2.3137e-02 8.9789e-01 0.0036187 weaklyHypometh 1.000000 1 insignificant 9.5420e-01 0.014095 weaklyHypometh 1.000000 1 insignificant -0.0422276 0.023358 weaklyHypometh 1 insignificant 0.8859283 0.7912173 0.03816286 9 0.8319195 0.8072952 0.0246243 3.6574e-03 0.8356967 weaklyHypermeth 5.7146e-02 1 weaklyHypermeth 4.2539e-02 0.89004479 weaklyHypermeth 7.4629e-01 1.000000 insignificant 0.04119531 1.8492e-01 insignificant 1.0000e+00 insignificant 0.8859283 0.849044 -0.0223862 9 0.8319195 0.878203 -0.04628337 9.8908e-01 0.00043267 weaklyHypometh 1.0000e+00 0.108168 insignificant 9.9990e-01 0.02814698 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.05735641 0.03550909 weaklyHypometh 1.00000 insignificant 0.8471735 0.7912173 0.05782340 13 0.8550570 0.8072952 0.04776173 5.7410e-04 0.9965256 weaklyHypermeth 1.0632e-02 1 weaklyHypermeth 1.1764e-02 0.9995088 weaklyHypermeth 2.3527e-01 1 insignificant 0.0834230 2.0877e-02 weaklyHypermeth 4.8054e-01 insignificant 0.8471735 0.849044 -0.0053366 9 0.8550570 0.878203 -2.3146e-02 7.9550e-01 0.2132876 insignificant 1.0000e+00 1.00000 insignificant 8.2963e-01 0.422055 insignificant 1.0000e+00 1 insignificant -0.0151288 0.5331980 insignificant 1.00000 insignificant 0.7912173 0.849044 -0.0645587 9 0.8072952 0.878203 -0.0709077 9.9998e-01 4.0529e-04 weaklyHypometh 1.0000e+00 1.0954e-02 weaklyHypometh 9.9999e-01 1.2286e-03 weaklyHypometh 1.0000000 4.3878e-02 weaklyHypometh -0.0985517 1.3560e-02 weaklyHypometh 0.3568365 insignificant chr12 51903101 51904101 114467 RARG ENSG00000172819 0.0549895 210 10 0.0395833 149 8 0.0408449 208 8 0.0378378 152 7 0.0056818 173 7 0.047895 297 10 0.0295238 259 10 0.0043478 176 7 0.0104762 183 7 0.1154762 150 7 0.0654208 181 10 0.032588 212 5 0.0773449 164 7 NA 0 0 0.029741 234 10 0.0365353 183 7 0.047324 270 7 0.0841905 211 10 0.0566667 104 7 0.014426 294 10 0.000000 77 7 0.0083333 116 6 0.063435 230 10 0.006250 93 5 0.046667 88 7 0.0150303 161 7 0.020769 168 7 0.055543 104 7 0.010417 111 7 0.0137931 187 7 0.063460 211 7 0.0374869 406 10 0.0058824 155 7 0.021143 105 7 0.000000 131 8 0.000000 103 9 0.031092 56 4 0.0000000 144 7 0.0174473 274 10 0.0527991 284 10 0.011111 127 7 0.0404022 220 10 0.046069 176 10 0.0328552 0.0276639 0.0209270 0.0000000 0.0074516 0.0483413 0.0066354 0.0030886 0.0087432 0.0187354 0.0071952 0.0200909 0.0470513 NA 0.0022916 0.0348013 0.041997 0.0806311 0.0047359 0.025575 0.000000 0.0368852 0.0748747 0.0032787 0.0000000 0.0219374 0.036192 0.0983692 0.013661 0.0094215 0.0397921 0.0266824 0.0260366 0.0342545 0.0000000 0.000000 0.059177 0.0000000 0.0232595 0.052385 0.012750 0.0351152 0.052175 2 0.0338583 0.0373975 -0.0034764 10 0.0416917 0.0406007 1.0910e-03 5.0910e-01 0.2350017 insignificant 1.000000 1 insignificant 1.8068e-01 0.704639 insignificant 1.000000 1 insignificant 0.0152993 0.114517 insignificant 1 insignificant 0.0338583 0.0115274 0.01865890 7 0.0416917 0.0073838 0.0343080 9.1350e-05 0.9914353 weaklyHypermeth 1.7912e-03 1 weaklyHypermeth 2.1324e-04 0.99752641 weaklyHypermeth 8.2016e-03 1.000000 weaklyHypermeth 0.03404497 7.3067e-04 weaklyHypermeth 3.8456e-02 weaklyHypermeth 0.0338583 0.031452 0.0035007 10 0.0416917 0.036835 0.00485639 3.8719e-01 0.06824669 insignificant 1.0000e+00 1.000000 insignificant 6.9631e-01 0.11912210 insignificant 1.0000e+00 1.000000 insignificant 0.01016555 0.35313405 insignificant 1.00000 insignificant 0.0373975 0.0115274 0.02332756 7 0.0406007 0.0073838 0.03321697 2.6656e-04 0.9999635 weaklyHypermeth 5.5533e-03 1 weaklyHypermeth 9.2932e-03 0.9999392 weaklyHypermeth 1.9773e-01 1 insignificant 0.0187457 4.7109e-02 weaklyHypermeth 9.0594e-01 insignificant 0.0373975 0.031452 0.0025078 10 0.0406007 0.036835 3.7654e-03 4.8463e-01 0.3515157 insignificant 1.0000e+00 1.00000 insignificant 9.8263e-01 0.128539 insignificant 1.0000e+00 1 insignificant -0.0051338 0.6397172 insignificant 1.00000 insignificant 0.0115274 0.031452 -0.0255243 7 0.0073838 0.036835 -0.0294516 1.0000e+00 1.5006e-05 weaklyHypometh 1.0000e+00 5.5578e-04 weaklyHypometh 1.0000e+00 4.0196e-04 weaklyHypometh 1.0000000 1.9141e-02 weaklyHypometh -0.0238794 4.4350e-02 weaklyHypometh 0.8063629 insignificant chr12 52025044 52026044 114477 SP7 ENSG00000170374 0.0152778 417 13 0.0058762 872 16 0.0026356 1136 16 0.0044997 213 8 0.0041493 713 14 0.078787 357 13 0.0107922 1179 14 0.0099712 642 14 0.0035673 916 14 0.0080231 915 14 0.0099013 652 14 0.012732 878 14 0.0066108 708 14 0.00000 29 2 0.017932 693 14 0.0048497 1020 14 0.011187 1168 12 0.0023810 239 8 0.0096751 480 14 0.097234 395 16 0.014485 280 14 0.0034722 98 8 0.013276 462 16 0.024709 216 13 0.067323 461 5 0.0062871 848 16 0.010969 280 11 0.023280 198 13 0.014357 643 14 0.0062661 917 16 0.066696 881 16 0.0199981 526 13 0.0076431 657 16 0.000000 611 14 0.019022 354 14 0.011834 326 8 0.021065 259 14 0.0096045 771 16 0.0039894 329 12 0.0931458 413 13 0.029012 244 8 0.0017544 244 8 0.011983 272 12 0.0183252 0.0186357 0.0035556 0.0114285 0.0069035 0.0453012 0.0089417 0.0038625 0.0046967 0.0162284 0.0226188 0.0204428 0.0131292 NA 0.0083691 0.0017413 0.020756 0.0072275 0.0219772 0.039585 0.020315 0.0068124 0.0276961 0.0390173 0.0010696 0.0113728 0.026296 0.0512877 0.021851 0.0146541 0.0141376 0.0513734 0.0094661 0.0000000 0.0045384 0.011563 0.064901 0.0344001 0.0135921 0.017484 0.015170 0.0069086 0.028300 8 0.0095441 0.0148021 -0.0038704 14 0.0523965 0.0391914 1.3205e-02 9.9912e-01 0.6630297 insignificant 1.000000 1 insignificant 9.8961e-01 0.960115 insignificant 1.000000 1 insignificant -0.0067893 0.429075 insignificant 1 insignificant 0.0095455 0.0100739 -0.00151616 14 0.0548916 0.0079925 0.0468991 9.0470e-01 0.9714000 insignificant 1.0000e+00 1 insignificant 6.0404e-01 0.99994901 insignificant 1.0000e+00 1.000000 insignificant 0.00427597 5.1532e-01 insignificant 1.0000e+00 insignificant 0.0095560 0.011984 0.0019883 8 0.0606696 0.066436 -0.00576607 4.9308e-01 0.99355221 insignificant 1.0000e+00 1.000000 insignificant 3.1066e-01 0.99999923 insignificant 1.0000e+00 1.000000 insignificant -0.01217284 0.52706507 insignificant 1.00000 insignificant 0.0148046 0.0100739 0.00268324 16 0.0410577 0.0079925 0.03306520 7.3178e-01 0.9971035 insignificant 1.0000e+00 1 insignificant 5.5431e-01 0.9998397 insignificant 1.0000e+00 1 insignificant 0.0110653 1.3623e-01 insignificant 1.0000e+00 insignificant 0.0148301 0.012000 0.0077220 8 0.0479006 0.070127 -2.2226e-02 3.4139e-01 0.9979904 insignificant 1.0000e+00 1.00000 insignificant 2.6458e-01 0.999999 insignificant 1.0000e+00 1 insignificant -0.0053836 0.7778624 insignificant 1.00000 insignificant 0.0101010 0.012016 0.0016142 8 0.0098731 0.074252 -0.0643786 9.8784e-01 9.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9202e-01 9.9990e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0164488 3.9157e-01 insignificant 1.0000000 insignificant chr12 52531740 52532740 114569 ENSG00000223213 0.8300042 456 13 0.7556796 337 13 0.8293226 158 13 0.8190993 200 11 0.8393745 127 13 0.808272 394 13 0.7948966 121 13 0.7944234 203 12 0.7619974 122 13 0.7665353 206 13 0.8326854 460 13 0.768135 150 12 0.8458476 279 12 NA 0 0 0.801858 303 13 0.6532738 73 8 0.749554 87 7 0.7700377 208 12 0.8459971 280 13 0.808106 376 13 0.869210 173 8 0.8686602 86 8 0.786115 315 13 0.774176 93 6 0.934028 50 3 0.7155400 565 13 0.848700 185 8 0.754329 40 3 0.811141 305 12 0.8458536 499 13 0.758052 440 13 0.8228685 448 13 0.7280772 312 12 0.733940 306 13 0.741839 191 13 0.862557 93 9 0.845626 130 8 0.6059838 455 12 0.8415978 275 13 0.8698054 393 13 0.839754 276 13 0.8280596 273 12 0.846330 283 12 0.8240769 0.7494170 0.8283829 0.8392712 0.8078156 0.8176673 0.8065854 0.7808514 0.7467716 0.8128680 0.8515698 0.7665199 0.8578617 NA 0.8191208 0.6960583 0.778325 0.7731450 0.8478201 0.804429 0.872874 0.8443506 0.7923114 0.7650303 0.9487176 0.7547348 0.833703 0.8095845 0.819305 0.8537973 0.8025258 0.8307372 0.7069498 0.7142838 0.7554811 0.804372 0.789901 0.6454475 0.8446775 0.863910 0.846762 0.8216092 0.841990 3 0.8156388 0.8674586 -0.0101758 13 0.8060428 0.8060531 -1.0249e-05 7.7314e-01 0.2352736 insignificant 1.000000 1 insignificant 9.4483e-01 0.025643 weaklyHypometh 1.000000 1 insignificant -0.0222965 0.294558 insignificant 1 insignificant 0.8156388 0.8016140 0.05658367 13 0.8060428 0.7477456 0.0582972 1.1706e-05 0.9999774 weaklyHypermeth 2.6012e-04 1 weaklyHypermeth 4.6633e-03 0.99801228 weaklyHypermeth 1.1482e-01 1.000000 insignificant 0.04042259 3.4641e-01 insignificant 1.0000e+00 insignificant 0.8156388 0.818000 -0.0368590 13 0.8060428 0.845535 -0.03949233 9.9674e-01 0.00683336 weaklyHypometh 1.0000e+00 0.460877 insignificant 9.9820e-01 0.01529825 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.05168310 0.00057344 weaklyHypometh 0.08192 weaklyHypometh 0.8674586 0.8016140 0.06314846 13 0.8060531 0.7477456 0.05830744 2.0801e-09 0.9998576 weaklyHypermeth 8.3202e-08 1 weaklyHypermeth 2.5475e-05 0.9999791 weaklyHypermeth 1.0615e-03 1 weaklyHypermeth 0.0627190 1.7681e-01 insignificant 1.0000e+00 insignificant 0.8674586 0.818000 -0.0222026 13 0.8060531 0.845535 -3.9482e-02 7.4051e-01 0.0221874 weaklyHypometh 1.0000e+00 1.00000 insignificant 6.2898e-01 0.282218 insignificant 1.0000e+00 1 insignificant -0.0293867 0.1448553 insignificant 1.00000 insignificant 0.8016140 0.818000 -0.0918934 13 0.7477456 0.845535 -0.0977895 1.0000e+00 4.2142e-07 weaklyHypometh 1.0000e+00 2.3412e-05 weaklyHypometh 9.9997e-01 1.0242e-04 weaklyHypometh 1.0000000 9.3113e-03 weaklyHypometh -0.0921057 5.9643e-02 insignificant 0.9175868 insignificant chr12 52928135 52929135 114632 SMUG1 ENSG00000123415 0.7128194 230 7 0.7929344 191 7 0.6946793 105 6 0.7736367 169 6 0.6456633 47 6 0.737601 287 7 0.7107234 79 6 0.7061661 213 7 0.6932013 85 6 0.9155556 50 3 0.7232210 269 8 0.704082 31 3 0.6920139 100 7 0.75833 99 7 0.669234 102 7 0.4444444 23 1 0.166667 9 0 0.6969701 212 7 0.7054959 176 7 0.774938 247 7 0.741597 73 3 0.7301587 53 6 0.609032 117 6 0.772593 67 4 0.762755 45 4 0.6604815 235 7 0.758730 44 5 0.709259 42 4 0.647812 198 7 0.7753199 246 7 0.688759 196 8 0.7045685 297 7 0.6723310 137 6 0.664055 92 6 0.748551 180 6 0.783333 19 1 0.624892 120 5 0.7336795 279 7 0.7875465 203 7 0.7445090 180 7 0.736679 145 7 0.7276786 115 6 0.758120 176 7 0.7839838 0.7560540 0.6666935 0.7986990 0.7075020 0.7825474 0.7383160 0.7610429 0.7387477 0.7907883 0.7649919 0.7282522 0.7301055 0.8435754 0.7446188 0.5592974 0.457342 0.7501203 0.7648426 0.815723 0.807098 0.7811918 0.7824554 0.8161976 0.8172386 0.7724070 0.676776 0.7407221 0.728646 0.8208968 0.7407632 0.7827878 0.7573887 0.7226287 0.6599407 0.629330 0.670828 0.8232536 0.8470117 0.748728 0.789115 0.7461426 0.780169 3 0.7474302 0.7644141 -0.0194604 7 0.7212910 0.7115670 9.7241e-03 6.1829e-01 0.0987289 insignificant 1.000000 1 insignificant 7.8293e-01 0.058000 insignificant 1.000000 1 insignificant -0.0275031 0.460711 insignificant 1 insignificant 0.7474302 0.7593712 0.00687601 6 0.7212910 0.7113351 0.0099560 3.1382e-01 0.1680447 insignificant 1.0000e+00 1 insignificant 4.9488e-01 0.23787215 insignificant 1.0000e+00 1.000000 insignificant -0.01855468 6.5819e-01 insignificant 1.0000e+00 insignificant 0.7474302 0.759169 -0.0330894 7 0.7212910 0.755923 -0.03463217 9.6947e-01 0.00696901 weaklyHypometh 1.0000e+00 0.460877 insignificant 9.3398e-01 0.01675108 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.06498779 0.07611891 insignificant 1.00000 insignificant 0.7644141 0.7593712 0.02576018 6 0.7115670 0.7113351 0.00023191 2.6884e-01 0.6589603 insignificant 1.0000e+00 1 insignificant 2.6137e-01 0.7639308 insignificant 1.0000e+00 1 insignificant 0.0089484 7.6443e-01 insignificant 1.0000e+00 insignificant 0.7644141 0.759169 -0.0139529 7 0.7115670 0.755923 -4.4356e-02 8.8421e-01 0.0301433 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.0286e-01 0.071627 insignificant 1.0000e+00 1 insignificant -0.0374847 0.0631374 insignificant 1.00000 insignificant 0.7593712 0.759169 -0.0403203 6 0.7113351 0.755923 -0.0445881 9.9988e-01 1.4086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 2.1645e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0464331 1.2669e-01 insignificant 1.0000000 insignificant chr12 54452144 54453144 114739 GDF11 ENSG00000135414 0.6247783 203 5 0.4502926 130 5 0.5340839 101 5 0.6995671 93 5 0.6356417 62 5 0.599039 322 5 0.4128254 106 5 0.4279887 64 5 0.5485084 125 5 0.4353846 91 5 0.6094220 138 5 0.477372 69 5 0.6127743 107 5 NA 0 0 0.566901 96 5 0.5628571 54 5 0.400000 70 5 0.6215942 102 5 0.6028039 138 5 0.684957 283 5 0.583333 53 5 0.6594444 68 5 0.562622 100 5 0.652455 69 5 0.599683 43 5 0.5959835 161 5 0.672842 77 5 0.696032 28 3 0.487224 71 5 0.6797692 150 5 0.550905 155 5 0.6181236 304 5 0.3831948 99 5 0.352121 90 5 0.650988 80 5 0.568788 46 5 0.550518 82 5 0.5864301 141 5 0.6108995 140 5 0.6876681 167 5 0.614365 83 5 0.7348881 196 5 0.654071 139 5 0.6173199 0.4401490 0.5223129 0.7037290 0.6511604 0.5946036 0.3912086 0.4017521 0.5186223 0.3863023 0.5929621 0.4811418 0.6106203 NA 0.5333667 0.5506057 0.388108 0.6271183 0.6173244 0.677365 0.585474 0.6701389 0.5449294 0.6425352 0.6085700 0.5792985 0.677475 0.7155214 0.459170 0.6801231 0.5364050 0.6080182 0.3625148 0.3566820 0.6691861 0.580775 0.546415 0.5800420 0.6008145 0.692704 0.600842 0.7308677 0.641921 5 0.5717927 0.6145426 -0.0373116 5 0.5734094 0.6104832 -3.7074e-02 9.9115e-01 0.0527142 insignificant 1.000000 1 insignificant 9.9209e-01 0.019366 weaklyHypometh 1.000000 1 insignificant -0.0602124 0.039233 lowCoverage 1 lowCoverage 0.5717927 0.5148699 0.06287851 5 0.5734094 0.5104205 0.0629889 1.1825e-02 0.9767394 weaklyHypermeth 1.6975e-01 1 insignificant 9.0854e-02 0.82692285 insignificant 1.0000e+00 1.000000 insignificant 0.03764893 5.0305e-01 lowCoverage 1.0000e+00 lowCoverage 0.5717927 0.667586 -0.0982320 5 0.5734094 0.670527 -0.09711806 9.9998e-01 0.00144135 weaklyHypometh 1.0000e+00 0.288269 insignificant 9.9998e-01 0.00181760 weaklyHypometh 1.0000e+00 0.363520 insignificant -0.10738944 0.00553427 lowCoverage 0.34848 lowCoverage 0.6145426 0.5148699 0.10065387 5 0.6104832 0.5104205 0.10006273 1.6846e-04 0.9997621 weaklyHypermeth 3.6621e-03 1 weaklyHypermeth 4.1984e-03 0.9991540 weaklyHypermeth 9.8897e-02 1 weaklyHypermeth 0.0978614 1.0620e-01 lowCoverage 1.0000e+00 lowCoverage 0.6145426 0.667586 -0.0600067 5 0.6104832 0.670527 -6.0044e-02 9.9701e-01 0.0052634 weaklyHypometh 1.0000e+00 0.65793 insignificant 9.8815e-01 0.026605 weaklyHypometh 1.0000e+00 1 insignificant -0.0471770 0.1433478 lowCoverage 1.00000 lowCoverage 0.5148699 0.667586 -0.1604088 5 0.5104205 0.670527 -0.1601070 9.9997e-01 4.9311e-05 weaklyHypometh 1.0000e+00 1.5907e-03 weaklyHypometh 9.9965e-01 3.8951e-04 weaklyHypometh 1.0000000 1.9141e-02 weaklyHypometh -0.1450384 3.1297e-02 weaklyHypometh 0.6520208 insignificant chr12 54487496 54488496 114745 GDF11 ENSG00000135414 0.7450750 451 12 0.6809738 274 12 0.6621138 175 11 0.8291524 161 11 0.6367025 111 11 0.706638 522 12 0.7062086 253 12 0.6703574 162 12 0.6720850 154 12 0.6923931 164 12 0.7676701 365 12 0.692767 162 11 0.7080214 263 12 NA 0 0 0.750478 274 12 0.7649553 190 12 0.693904 174 11 0.7701047 253 11 0.7282172 170 11 0.744959 465 12 0.743481 137 12 0.7352174 193 11 0.720460 329 12 0.810198 180 12 0.752768 190 10 0.7094649 224 12 0.785420 255 12 0.703307 148 12 0.669446 172 12 0.7023628 289 12 0.699901 278 12 0.7621266 634 12 0.6720803 193 11 0.685849 205 12 0.750275 244 12 0.768400 158 10 0.693858 174 12 0.6742425 265 12 0.7991623 641 11 0.8100032 468 12 0.749595 365 11 0.7831655 353 11 0.696047 475 11 0.7349415 0.6735155 0.6764525 0.8182853 0.6003835 0.6878336 0.6870590 0.6731008 0.6313922 0.6790050 0.7400582 0.6919760 0.7062856 NA 0.7420348 0.7589530 0.700992 0.7459834 0.7317357 0.724892 0.725641 0.7079850 0.7077247 0.8007871 0.7289760 0.7012393 0.762309 0.6829917 0.661466 0.6949938 0.7022685 0.7406361 0.6566905 0.6680463 0.7347856 0.731387 0.676180 0.6568830 0.7843183 0.797780 0.728285 0.7671976 0.702274 10 0.7326587 0.7418290 -0.0160131 12 0.7259945 0.7410565 -1.5062e-02 8.6308e-01 0.1148470 insignificant 1.000000 1 insignificant 7.7596e-01 0.200419 insignificant 1.000000 1 insignificant -0.0158578 0.326388 insignificant 1 insignificant 0.7326587 0.7086360 0.02291719 12 0.7259945 0.7077121 0.0182824 4.7199e-02 0.5783931 weaklyHypermeth 6.1297e-01 1 insignificant 1.2550e-01 0.46375546 insignificant 1.0000e+00 1.000000 insignificant 0.00953751 6.4515e-01 insignificant 1.0000e+00 insignificant 0.7326587 0.751955 -0.0541270 11 0.7259945 0.776745 -0.05075062 9.9455e-01 0.00017815 weaklyHypometh 1.0000e+00 0.059382 weaklyHypometh 9.9931e-01 0.00014074 weaklyHypometh 1.0000e+00 0.046915 weaklyHypometh -0.05060647 0.06965458 insignificant 1.00000 insignificant 0.7418290 0.7086360 0.03911491 12 0.7410565 0.7077121 0.03334436 2.6769e-03 0.8425293 weaklyHypermeth 4.4614e-02 1 weaklyHypermeth 4.3572e-02 0.8154615 weaklyHypermeth 7.0278e-01 1 insignificant 0.0253953 2.4376e-01 insignificant 1.0000e+00 insignificant 0.7418290 0.751955 -0.0317648 11 0.7410565 0.776745 -3.5689e-02 9.9607e-01 0.0194591 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9742e-01 0.042060 weaklyHypometh 1.0000e+00 1 insignificant -0.0347487 0.1867949 insignificant 1.00000 insignificant 0.7086360 0.751955 -0.0771803 11 0.7077121 0.776745 -0.0690330 9.9299e-01 6.7576e-05 weaklyHypometh 1.0000e+00 2.0478e-03 weaklyHypometh 9.9652e-01 3.5659e-04 weaklyHypometh 1.0000000 1.8768e-02 weaklyHypometh -0.0601440 5.3004e-02 insignificant 0.8983689 insignificant chr12 55199790 55200790 114773 GLS2 ENSG00000135423 0.5152917 229 8 0.6502188 192 8 0.5625139 155 8 0.5913341 158 8 0.7515625 82 8 0.657667 395 8 0.6305270 140 8 0.6469580 134 8 0.5702054 130 8 0.6963213 127 8 0.5816802 284 8 0.582639 58 5 0.6693122 145 8 0.88542 17 1 0.697859 147 8 0.5622086 82 5 0.664925 103 5 0.5327064 182 8 0.6023292 152 8 0.649679 302 8 0.666392 49 6 0.7792689 88 7 0.634686 169 8 0.718502 65 7 0.818378 81 7 0.6828868 227 8 0.560624 111 7 0.700000 41 4 0.673838 172 8 0.6319278 178 8 0.652298 203 8 0.5604145 390 9 0.6168771 102 8 0.312399 111 8 0.599793 200 8 0.725658 81 5 0.689573 107 8 0.6900318 214 8 0.4836130 197 8 0.5551724 199 8 0.482424 183 8 0.6622100 201 6 0.710704 219 8 0.7282976 0.6881375 0.6373292 0.7353574 0.7761783 0.7363825 0.6406088 0.7115671 0.6547323 0.7231737 0.7527316 0.6602004 0.6957065 0.7462930 0.7760615 0.6500296 0.706919 0.6436945 0.7063210 0.688167 0.697900 0.7514105 0.7072944 0.7741267 0.8522761 0.7208835 0.695720 0.7783741 0.693999 0.7828060 0.7110430 0.7121898 0.7510246 0.4579337 0.6172457 0.797233 0.676624 0.6852117 0.6480760 0.670883 0.665137 0.7253248 0.753081 4 0.6627256 0.6758737 -0.0099859 8 0.5935655 0.6042930 -1.0727e-02 8.6906e-01 0.5120129 insignificant 1.000000 1 insignificant 9.7873e-01 0.115864 insignificant 1.000000 1 insignificant -0.0382003 0.200098 insignificant 1 insignificant 0.6627256 0.6122699 0.04424186 8 0.5935655 0.5844254 0.0091401 4.1040e-03 0.8840007 weaklyHypermeth 6.3139e-02 1 weaklyHypermeth 1.4637e-01 0.93482055 insignificant 1.0000e+00 1.000000 insignificant 0.02934574 6.6596e-01 insignificant 1.0000e+00 insignificant 0.6627256 0.618619 0.0239581 8 0.5935655 0.532815 0.06075053 2.5026e-01 0.98959174 insignificant 1.0000e+00 1.000000 insignificant 4.4695e-01 0.96594890 insignificant 1.0000e+00 1.000000 insignificant 0.05624308 0.30986618 insignificant 1.00000 insignificant 0.6758737 0.6122699 0.05422275 8 0.6042930 0.5844254 0.01986756 1.8793e-02 0.9532536 weaklyHypermeth 2.5260e-01 1 insignificant 7.2356e-02 0.9453032 insignificant 1.0000e+00 1 insignificant 0.0675460 3.4141e-01 insignificant 1.0000e+00 insignificant 0.6758737 0.618619 0.0344880 8 0.6042930 0.532815 7.1478e-02 9.6212e-02 0.9878622 insignificant 1.0000e+00 1.00000 insignificant 1.1471e-01 0.959915 insignificant 1.0000e+00 1 insignificant 0.0944433 0.1171165 insignificant 1.00000 insignificant 0.6122699 0.618619 -0.0193741 8 0.5844254 0.532815 0.0516104 6.3300e-01 3.9350e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4786e-01 6.1616e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0268973 7.3634e-01 insignificant 1.0000000 insignificant chr12 55809301 55810301 114786 ENSG00000123384 0.1126984 200 6 0.0700758 149 6 0.0073529 233 8 0.0064103 117 5 0.0000000 157 8 0.140370 294 6 0.0012136 281 7 0.0395022 168 8 0.0057993 285 6 0.0065796 364 6 0.0141369 221 6 0.007353 248 6 0.0023585 185 7 0.00000 112 2 0.022013 270 6 0.0000000 216 6 0.000000 157 6 0.0018939 177 3 0.0054373 142 6 0.087149 243 7 0.133333 87 6 0.0416667 82 6 0.032152 249 6 0.000000 107 8 0.107143 98 3 0.0000000 211 8 0.015625 141 7 0.057143 105 8 0.031250 101 3 0.0000000 232 8 0.007353 178 6 0.0034480 274 6 0.0000000 148 8 0.002924 117 5 0.000000 107 3 0.000000 84 6 0.065385 58 5 0.0312500 146 7 0.1652140 198 6 0.0000000 189 6 0.312500 115 3 0.1272321 205 6 0.250000 113 4 0.0028733 0.0132200 0.0018330 0.0077359 0.0000000 0.0026818 0.0044831 0.0060949 0.0119688 0.0071193 0.0348712 0.0018330 0.0041157 0.0025825 0.0116744 0.0000000 0.000000 0.0069963 0.0134029 0.018284 0.013409 0.0000000 0.0027171 0.0000000 0.0000000 0.0000000 0.000000 0.0030352 0.011331 0.0000000 0.0018330 0.0094379 0.0000000 0.0081010 0.0000000 0.000000 0.030944 0.0000000 0.0143674 0.000000 0.022663 0.0035917 0.000000 3 0.0099550 0.0085791 0.0028996 6 0.0504769 0.0507782 -3.0126e-04 4.8647e-01 0.9751468 insignificant 1.000000 1 insignificant 2.9467e-01 0.983740 insignificant 1.000000 1 insignificant -0.0092423 0.563653 insignificant 1 insignificant 0.0099550 0.0090909 0.00498386 6 0.0504769 0.0562660 -0.0057891 3.5652e-01 0.9958424 insignificant 1.0000e+00 1 insignificant 3.3174e-01 0.99965504 insignificant 1.0000e+00 1.000000 insignificant 0.00992408 5.0343e-01 insignificant 1.0000e+00 insignificant 0.0099550 0.013415 -0.0032580 6 0.0504769 0.307967 -0.25748989 9.5432e-01 0.00239665 weaklyHypometh 1.0000e+00 0.366539 insignificant 9.1007e-01 0.00173962 weaklyHypometh 1.0000e+00 0.363520 insignificant -0.14447205 0.05326606 insignificant 1.00000 insignificant 0.0085791 0.0090909 0.00225748 6 0.0507782 0.0562660 -0.00548781 7.6493e-01 0.9738928 insignificant 1.0000e+00 1 insignificant 8.2850e-01 0.9972820 insignificant 1.0000e+00 1 insignificant 0.0191664 2.7084e-01 insignificant 1.0000e+00 insignificant 0.0085791 0.013415 -0.0092532 6 0.0507782 0.307967 -2.5719e-01 9.9970e-01 0.0126315 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9977e-01 0.010773 weaklyHypometh 1.0000e+00 1 insignificant -0.1352298 0.0636309 insignificant 1.00000 insignificant 0.0090909 0.013415 -0.0116518 6 0.0562660 0.307967 -0.2517008 9.9991e-01 1.3931e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.5557e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1543961 4.3502e-02 weaklyHypometh 0.8055917 insignificant chr12 55815343 55816343 114789 ENSG00000123384 0.4714177 107 10 0.4068979 224 10 0.7475416 255 10 0.5263627 116 7 0.4233373 92 4 0.699351 73 4 0.3811212 112 5 0.5008043 88 4 0.4219084 81 4 0.4565359 86 4 0.4712319 161 4 0.516111 37 4 0.0526316 110 4 0.43658 65 4 0.328893 121 4 0.7074074 29 3 0.000000 1 0 0.3740929 112 8 0.4710092 124 3 0.215986 136 9 0.495741 117 4 0.2914474 76 4 0.724825 100 9 0.253030 47 3 0.681798 72 4 0.4506993 361 10 0.568273 149 4 0.660000 42 4 0.753538 61 1 0.2258888 402 10 0.195711 465 10 0.8298990 116 10 0.0893690 375 10 0.042085 88 4 0.190476 251 7 0.133333 16 0 0.065391 104 4 0.1855188 342 10 0.3866667 118 5 0.3596616 86 5 0.196667 83 5 0.4105556 49 2 0.358429 88 7 0.4437582 0.3660899 0.5829775 0.3266157 0.3697899 0.4440994 0.2965744 0.5239842 0.3450990 0.4674890 0.5233066 0.5019626 0.0543478 0.3733676 0.2569405 0.4380715 NA 0.2954488 0.2636617 0.138531 0.670350 0.2070938 0.6002805 0.2638340 0.5130347 0.4268541 0.432287 0.5766908 0.617719 0.1691089 0.1568170 0.6913702 0.0112444 0.0473135 0.0000000 0.115942 0.073851 0.1856219 0.3113155 0.236907 0.000000 0.2820048 0.319715 1 0.3976526 0.3829681 0.0238947 5 0.4735561 0.3860291 8.7527e-02 8.8877e-02 0.9762808 insignificant 1.000000 1 insignificant 9.6280e-01 0.497127 insignificant 1.000000 1 insignificant -0.0804430 0.311433 insignificant 1 insignificant 0.3976526 0.1139456 0.30019065 5 0.4735561 0.1138507 0.3597053 3.6019e-15 1.0000000 hypermethylated 1.8009e-13 1 hypermethylated 4.2615e-11 1.00000000 hypermethylated 8.5230e-09 1.000000 hypermethylated 0.31276584 1.4933e-06 hypermethylated 1.1487e-04 hypermethylated 0.3976526 0.242925 0.1204442 5 0.4735561 0.320843 0.15271330 1.6979e-03 0.99915531 weaklyHypermeth 8.0852e-02 1.000000 weaklyHypermeth 2.1957e-03 0.99884299 weaklyHypermeth 1.2198e-01 1.000000 insignificant 0.08806539 0.13880030 lowCoverage 1.00000 lowCoverage 0.3829681 0.1139456 0.26775632 10 0.3860291 0.1138507 0.27217833 1.2799e-09 1.0000000 hypermethylated 5.3329e-08 1 hypermethylated 2.9105e-09 1.0000000 hypermethylated 5.8209e-07 1 hypermethylated 0.3932088 6.4645e-05 hypermethylated 4.0403e-03 hypermethylated 0.3829681 0.242925 0.0778095 8 0.3860291 0.320843 6.5186e-02 1.0470e-01 0.9163404 insignificant 1.0000e+00 1.00000 insignificant 5.8713e-03 0.999926 weaklyHypermeth 2.7958e-01 1 insignificant 0.1685083 0.0407571 lowCoverage 1.00000 lowCoverage 0.1139456 0.242925 -0.1571268 8 0.1138507 0.320843 -0.2069920 1.0000e+00 6.1873e-06 weaklyHypometh 1.0000e+00 2.4777e-04 weaklyHypometh 1.0000e+00 2.3824e-03 weaklyHypometh 1.0000000 7.4457e-02 weaklyHypometh -0.2247004 1.4977e-03 lowCoverage 0.0748830 lowCoverage chr12 55815698 55816698 114790 ENSG00000123384 0.4714177 107 10 0.4068979 224 10 0.7475416 255 10 0.5263627 116 7 0.4233373 92 4 0.699351 73 4 0.3811212 112 5 0.5008043 88 4 0.4219084 81 4 0.4565359 86 4 0.4712319 161 4 0.516111 37 4 0.0526316 110 4 0.43658 65 4 0.328893 121 4 0.7074074 29 3 0.000000 1 0 0.3740929 112 8 0.4710092 124 3 0.215986 136 9 0.495741 117 4 0.2914474 76 4 0.724825 100 9 0.253030 47 3 0.681798 72 4 0.4506993 361 10 0.568273 149 4 0.660000 42 4 0.753538 61 1 0.2258888 402 10 0.195711 465 10 0.8298990 116 10 0.0893690 375 10 0.042085 88 4 0.190476 251 7 0.133333 16 0 0.065391 104 4 0.1855188 342 10 0.3866667 118 5 0.3596616 86 5 0.196667 83 5 0.4105556 49 2 0.358429 88 7 0.4437582 0.3660899 0.5829775 0.3266157 0.3697899 0.4440994 0.2965744 0.5239842 0.3450990 0.4674890 0.5233066 0.5019626 0.0543478 0.3733676 0.2569405 0.4380715 NA 0.2954488 0.2636617 0.138531 0.670350 0.2070938 0.6002805 0.2638340 0.5130347 0.4268541 0.432287 0.5766908 0.617719 0.1691089 0.1568170 0.6913702 0.0112444 0.0473135 0.0000000 0.115942 0.073851 0.1856219 0.3113155 0.236907 0.000000 0.2820048 0.319715 1 0.3976526 0.3829681 0.0238947 5 0.4735561 0.3860291 8.7527e-02 8.8877e-02 0.9762808 insignificant 1.000000 1 insignificant 9.6280e-01 0.497127 insignificant 1.000000 1 insignificant -0.0804430 0.311433 insignificant 1 insignificant 0.3976526 0.1139456 0.30019065 5 0.4735561 0.1138507 0.3597053 3.6019e-15 1.0000000 hypermethylated 1.8009e-13 1 hypermethylated 4.2615e-11 1.00000000 hypermethylated 8.5230e-09 1.000000 hypermethylated 0.31276584 1.4933e-06 hypermethylated 1.1487e-04 hypermethylated 0.3976526 0.242925 0.1204442 5 0.4735561 0.320843 0.15271330 1.6979e-03 0.99915531 weaklyHypermeth 8.0852e-02 1.000000 weaklyHypermeth 2.1957e-03 0.99884299 weaklyHypermeth 1.2198e-01 1.000000 insignificant 0.08806539 0.13880030 lowCoverage 1.00000 lowCoverage 0.3829681 0.1139456 0.26775632 10 0.3860291 0.1138507 0.27217833 1.2799e-09 1.0000000 hypermethylated 5.3329e-08 1 hypermethylated 2.9105e-09 1.0000000 hypermethylated 5.8209e-07 1 hypermethylated 0.3932088 6.4645e-05 hypermethylated 4.0403e-03 hypermethylated 0.3829681 0.242925 0.0778095 8 0.3860291 0.320843 6.5186e-02 1.0470e-01 0.9163404 insignificant 1.0000e+00 1.00000 insignificant 5.8713e-03 0.999926 weaklyHypermeth 2.7958e-01 1 insignificant 0.1685083 0.0407571 lowCoverage 1.00000 lowCoverage 0.1139456 0.242925 -0.1571268 8 0.1138507 0.320843 -0.2069920 1.0000e+00 6.1873e-06 weaklyHypometh 1.0000e+00 2.4777e-04 weaklyHypometh 1.0000e+00 2.3824e-03 weaklyHypometh 1.0000000 7.4457e-02 weaklyHypometh -0.2247004 1.4977e-03 lowCoverage 0.0748830 lowCoverage chr12 55838361 55839361 114796 ENSG00000203388 0.9600271 126 6 0.8793779 215 6 0.8680152 177 7 0.9495964 105 4 0.9642857 30 4 0.927439 152 6 0.9416667 67 4 0.8839296 84 4 0.9175858 73 4 0.9361055 82 4 0.9319853 131 4 0.955882 43 4 0.8577381 102 4 NA 0 0 0.964286 69 4 0.8571429 28 4 0.891667 28 4 0.8782772 109 6 0.9182692 68 4 0.943532 177 6 0.925779 93 4 0.9258929 40 4 0.884225 169 6 0.862019 70 4 0.975000 45 4 0.9336299 173 6 0.923077 56 4 1.000000 20 2 0.918269 64 4 0.9543911 235 7 0.930410 163 6 0.9470232 248 6 0.4007695 255 6 0.525794 58 4 0.225850 200 4 0.710606 56 4 0.522222 41 3 0.6766112 188 6 0.9189731 136 6 0.8981504 195 6 0.875910 87 4 0.9469932 199 4 0.884048 129 6 0.9382853 0.8540071 0.9497006 0.9145100 0.9690310 0.8973152 0.9272727 0.8962616 0.9008553 0.9262685 0.9332065 0.9382970 0.8608225 NA 0.9690310 0.8761239 0.892774 0.8608742 0.9291286 0.933896 0.935640 0.9262488 0.9287718 0.8701318 0.9650350 0.9150636 0.902636 1.0000000 0.918908 0.9353844 0.9050540 0.9293971 0.5689101 0.5740371 0.2331002 0.736978 0.570940 0.6218060 0.9035757 0.913945 0.884977 0.9193305 0.849181 4 0.9126474 0.9345930 -0.0194069 6 0.8762050 0.9382983 -6.2093e-02 9.9578e-01 0.0147161 weaklyHypometh 1.000000 1 insignificant 9.2521e-01 0.299788 insignificant 1.000000 1 insignificant -0.0144426 0.298709 lowCoverage 1 lowCoverage 0.9126474 0.5814536 0.35207166 6 0.8762050 0.4894048 0.3868002 4.4781e-28 0.9999985 hypermethylated 6.3973e-26 1 hypermethylated 2.1464e-07 0.99998623 hypermethylated 1.3415e-05 1.000000 hypermethylated 0.40689159 2.4629e-03 lowCoverage 1.0262e-01 lowCoverage 0.9134409 0.899464 0.0053860 6 0.9111280 0.910756 0.00037176 2.3733e-01 0.39500431 insignificant 1.0000e+00 1.000000 insignificant 2.0681e-01 0.75986285 insignificant 1.0000e+00 1.000000 insignificant 0.01238547 0.44506612 lowCoverage 1.00000 lowCoverage 0.9345930 0.5814536 0.38917476 6 0.9382983 0.4894048 0.44889352 6.8665e-22 1.0000000 hypermethylated 5.7221e-20 1 hypermethylated 1.0632e-07 1.0000000 hypermethylated 8.8598e-06 1 hypermethylated 0.4213342 2.0424e-03 lowCoverage 8.8801e-02 lowCoverage 0.9341716 0.899464 0.0229819 6 0.9349591 0.910756 2.4203e-02 3.9453e-02 0.8707912 weaklyHypermeth 9.6228e-01 1.00000 insignificant 4.7803e-02 0.741557 weaklyHypermeth 1.0000e+00 1 insignificant 0.0268281 0.1385853 lowCoverage 1.00000 lowCoverage 0.5832274 0.899464 -0.3486027 6 0.4952147 0.910756 -0.4155416 1.0000e+00 7.0114e-11 hypomethylated 1.0000e+00 7.3783e-09 hypomethylated 1.0000e+00 3.1711e-06 hypomethylated 1.0000000 1.0570e-03 hypomethylated -0.3945061 2.6639e-03 lowCoverage 0.1210870 lowCoverage chr12 55847761 55848761 114797 ENSG00000203388 0.8850394 183 5 0.8515666 114 5 0.8980392 77 5 0.9358559 119 5 0.9418182 37 5 0.787802 83 5 0.8739011 48 5 0.8792593 75 5 0.9044444 70 5 0.9396078 89 5 0.9333958 189 5 0.966667 28 5 0.9717262 121 5 NA 0 0 0.919992 112 5 0.9214286 30 3 0.870000 36 4 0.9427187 112 5 1.0000000 69 2 0.894709 96 3 0.950000 48 3 0.9151786 45 3 0.971429 98 5 0.891667 29 3 0.766667 26 5 0.9668333 139 5 0.777778 18 1 0.766667 15 2 0.906464 117 5 0.9567656 153 5 0.899697 127 5 0.8965015 201 5 0.7203581 105 5 0.880000 57 5 0.792857 81 5 0.917778 28 3 0.849091 47 4 0.8250000 62 5 0.9194437 160 5 0.9446708 147 5 0.885288 129 5 0.9368227 209 5 0.868218 126 5 0.8547727 0.8107390 0.9293206 0.9185627 0.9458774 0.8918310 0.8339829 0.8292420 0.8772610 0.9046968 0.9036534 0.9418605 0.9779381 NA 0.9039143 0.8712625 0.811047 0.9452935 1.0000000 0.921296 0.934623 0.8992098 0.9584718 0.8673623 0.8837209 0.9540213 0.903101 0.8837209 0.884367 0.9365250 0.8545631 0.8849188 0.8404598 0.8255814 0.7537375 0.868217 0.887421 0.9491279 0.9118955 0.930097 0.850163 0.9145950 0.854949 1 0.9265403 0.9301181 -0.0050354 5 0.9214665 0.9264296 -4.9631e-03 7.1969e-01 0.5260954 insignificant 1.000000 1 insignificant 9.1598e-01 0.369867 insignificant 1.000000 1 insignificant 0.0226683 0.373542 lowCoverage 1 lowCoverage 0.9265403 0.8394737 0.08489616 5 0.9214665 0.8410926 0.0803739 3.1928e-03 0.7590119 weaklyHypermeth 5.2340e-02 1 weaklyHypermeth 4.9551e-01 0.58405106 insignificant 1.0000e+00 1.000000 insignificant 0.08062480 3.4509e-02 lowCoverage 8.2164e-01 lowCoverage 0.9265403 0.927367 0.0042459 5 0.9214665 0.917917 0.00354907 6.0359e-01 0.75750653 insignificant 1.0000e+00 1.000000 insignificant 2.6652e-01 0.89911963 insignificant 1.0000e+00 1.000000 insignificant 0.00058361 0.97553470 lowCoverage 1.00000 lowCoverage 0.9301181 0.8394737 0.08985430 5 0.9264296 0.8410926 0.08533705 3.4114e-02 0.8607979 weaklyHypermeth 4.3735e-01 1 insignificant 5.3935e-01 0.5517847 insignificant 1.0000e+00 1 insignificant 0.0579565 1.3455e-01 lowCoverage 1.0000e+00 lowCoverage 0.9301181 0.927367 0.0093708 5 0.9264296 0.917917 8.5122e-03 4.3597e-01 0.7714651 insignificant 1.0000e+00 1.00000 insignificant 1.2829e-01 0.968158 insignificant 1.0000e+00 1 insignificant -0.0220847 0.4196109 lowCoverage 1.00000 lowCoverage 0.8394737 0.927367 -0.0806826 5 0.8410926 0.917917 -0.0768248 7.7703e-01 1.5905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5604e-01 8.1405e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0800412 3.8669e-02 lowCoverage 0.7891542 lowCoverage chr12 56415197 56416197 114834 OS9 ENSG00000135506 0.0056818 146 8 0.0083686 275 8 0.0016234 351 8 0.0000000 31 4 0.0222222 76 5 0.006250 148 8 0.0045455 207 5 0.0100000 90 5 0.0000000 125 5 0.0080000 161 5 0.0000000 148 5 0.010802 215 5 0.0000000 155 5 NA 0 0 0.010000 149 5 0.0000000 185 5 0.010000 116 5 0.0000000 45 7 0.0000000 109 5 0.038690 121 8 0.000000 54 5 0.0000000 17 1 0.029635 199 8 0.000000 68 4 0.000000 5 0 0.0096721 303 8 0.000000 70 5 0.025833 51 4 0.000000 85 5 0.0000000 325 8 0.000000 278 8 0.0459770 181 7 0.0200694 232 8 0.011111 62 5 0.000000 200 7 0.000000 20 3 0.000000 45 5 0.0044643 181 8 0.0052083 125 7 0.0126437 99 5 0.000000 38 2 0.0000000 72 5 0.058892 55 5 0.0083817 0.0092199 0.0000000 0.0000000 0.0157604 0.0081560 0.0037073 0.0081560 0.0000000 0.0073759 0.0000000 0.0117984 0.0000000 NA 0.0092199 0.0000000 0.016667 0.0000000 0.0000000 0.000000 0.000000 0.0000000 0.0287860 0.0000000 0.0000000 0.0061671 0.000000 0.0324173 0.000000 0.0000000 0.0000000 0.0048912 0.0205307 0.0090623 0.0000000 0.000000 0.000000 0.0000000 0.0067967 0.023787 0.000000 0.0000000 0.083269 2 0.0056081 0.0073350 -0.0009484 7 0.0072399 0.0077273 -4.8739e-04 5.8669e-01 0.6150604 insignificant 1.000000 1 insignificant 7.3719e-01 0.732586 insignificant 1.000000 1 insignificant -0.0020921 0.684019 insignificant 1 insignificant 0.0056081 0.0067568 -0.00078999 7 0.0072399 0.0096731 -0.0024332 6.4911e-01 0.3205472 insignificant 1.0000e+00 1 insignificant 7.0912e-01 0.55723928 insignificant 1.0000e+00 1.000000 insignificant 0.00122681 7.6550e-01 insignificant 1.0000e+00 insignificant 0.0056081 0.020566 -0.0152017 5 0.0072399 0.013324 -0.00608416 2.8067e-01 0.17048951 insignificant 1.0000e+00 1.000000 insignificant 7.8432e-01 0.45472703 insignificant 1.0000e+00 1.000000 insignificant -0.00818130 0.50796796 lowCoverage 1.00000 lowCoverage 0.0073350 0.0067568 0.00064857 7 0.0077273 0.0096731 -0.00194583 6.4401e-01 0.6448743 insignificant 1.0000e+00 1 insignificant 8.6523e-01 0.8018446 insignificant 1.0000e+00 1 insignificant 0.0033190 5.6433e-01 insignificant 1.0000e+00 insignificant 0.0073350 0.020566 -0.0138115 5 0.0077273 0.013324 -5.5968e-03 7.1514e-01 0.2307529 insignificant 1.0000e+00 1.00000 insignificant 7.3693e-01 0.485295 insignificant 1.0000e+00 1 insignificant -0.0060892 0.6325193 lowCoverage 1.00000 lowCoverage 0.0067568 0.020566 -0.0142423 5 0.0096731 0.013324 -0.0036509 5.2306e-01 4.7550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0564e-01 6.1981e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0094081 4.5697e-01 lowCoverage 1.0000000 lowCoverage chr12 56568037 56569037 114844 ENSG00000210429 0.6261272 149 5 0.2364757 266 5 0.5023810 60 4 0.6330948 146 5 0.4040816 54 4 0.731710 207 5 0.5253623 82 5 0.4386473 56 5 0.4349490 40 4 0.7333333 26 1 0.6307210 174 5 0.826531 36 4 0.5166667 19 1 0.61458 28 1 0.627273 51 4 0.6400000 25 1 NA 0 0 0.3988284 220 5 0.6381355 104 5 0.631237 134 5 0.622222 47 4 0.3627451 43 1 0.558721 72 5 0.487446 44 5 0.530214 287 5 0.4914073 115 5 0.485714 52 4 0.450000 16 0 0.764977 80 5 0.6345304 142 5 0.609704 168 5 0.5853974 149 5 0.0000000 135 5 0.057778 99 5 0.000000 67 4 0.030508 293 5 0.000000 166 5 0.0051282 159 5 0.6633050 166 5 0.4346727 159 5 0.530133 181 5 0.3011583 74 4 0.626871 147 5 0.5186025 0.2371908 0.3495652 0.4248321 0.4693168 0.5937309 0.4131065 0.3631170 0.4029503 0.6765217 0.5472810 0.5453416 0.2971014 0.5159420 0.4619236 0.5628986 NA 0.2894760 0.5082682 0.438817 0.629469 0.2856954 0.3767789 0.3941653 0.4012160 0.4072507 0.470725 0.2173913 0.521739 0.4488365 0.4007827 0.4967470 0.0000000 0.0338164 0.0000000 0.021223 0.000000 0.0011148 0.4247071 0.243251 0.300187 0.2408931 0.374893 1 0.4903017 0.5152263 -0.0332716 5 0.6034255 0.5882416 1.5184e-02 8.3215e-01 0.1733258 insignificant 1.000000 1 insignificant 4.6241e-01 0.975659 insignificant 1.000000 1 insignificant 0.0193121 0.666583 lowCoverage 1 lowCoverage 0.4893276 0.0141458 0.47589373 5 0.5554420 0.0087430 0.5466991 1.4916e-27 1.0000000 hypermethylated 1.8645e-25 1 hypermethylated 2.8677e-12 1.00000000 hypermethylated 1.4338e-09 1.000000 hypermethylated 0.55233294 2.6480e-13 lowCoverage 4.4133e-11 lowCoverage 0.4890433 0.480055 0.0378184 5 0.4998541 0.388479 0.11137470 3.6208e-02 0.63029885 weaklyHypermeth 1.0000e+00 1.000000 insignificant 2.4367e-02 0.98781157 weaklyHypermeth 8.2942e-01 1.000000 insignificant 0.05667405 0.46928527 lowCoverage 1.00000 lowCoverage 0.5152263 0.0142232 0.50248821 5 0.5882416 0.0112409 0.57700065 2.2264e-31 0.9999942 hypermethylated 5.5660e-29 1 hypermethylated 1.0759e-10 1.0000000 hypermethylated 5.3797e-08 1 hypermethylated 0.5330208 3.0537e-10 lowCoverage 4.3624e-08 lowCoverage 0.5149007 0.481379 0.0749890 5 0.5902049 0.543871 4.6334e-02 2.0073e-02 0.8221226 weaklyHypermeth 6.2641e-01 1.00000 insignificant 2.8083e-02 0.828998 weaklyHypermeth 9.0591e-01 1 insignificant 0.0373619 0.6254152 lowCoverage 1.00000 lowCoverage 0.0141767 0.480055 -0.4588158 5 0.0112409 0.388479 -0.3772384 1.0000e+00 2.0311e-23 hypomethylated 1.0000e+00 1.0156e-20 hypomethylated 1.0000e+00 6.3878e-07 hypomethylated 1.0000000 3.1939e-04 hypomethylated -0.4956589 1.4695e-03 lowCoverage 0.0748830 lowCoverage chr12 60785352 60786352 115139 FAM19A2 ENSG00000198673 0.86976 69 5 0.68657 78 5 0.63889 36 4 0.81964 100 5 0.76444 44 5 0.73002 130 5 0.54000 26 4 0.74412 82 5 0.75556 48 5 0.78941 34 2 0.73246 114 5 0.60000 21 4 0.68223 58 5 0.76000 13 1 0.64444 43 5 0.40000 5 0 0.75000 4 0 0.86934 90 5 0.76667 52 5 0.76860 78 5 0.77333 19 1 0.97931 39 1 0.70952 37 5 0.59048 33 1 0.84643 39 5 0.77068 90 5 0.69000 65 4 0.90000 36 2 0.83333 60 5 0.73641 108 5 0.62338 81 5 0.80054 99 5 0.65909 71 5 0.69879 49 5 0.780000 90 5 0.60000 9 0 0.605890 119 5 0.73842 77 5 0.82832 58 5 0.90096 69 5 0.76263 87 5 0.74222 47 5 0.84000 99 5 0.86996 0.69028 0.64840 0.82206 0.76709 0.73530 0.54808 0.74378 0.76090 0.79072 0.73750 0.59231 0.68326 0.76538 0.64957 0.40385 0.74028 0.87076 0.77106 0.77192 0.77628 0.97812 0.71108 0.59890 0.84512 0.77060 0.69327 0.90385 0.83654 0.74124 0.62656 0.80546 0.66259 0.69260 0.78365 0.59615 0.613068 0.74155 0.831966 0.90116 0.76311 0.74808 0.84135 0 0.74844 0.77479 -0.0237123 5 0.74760 0.77028 -0.02268026 0.9371359 0.245211 insignificant 1 1 insignificant 0.963598 0.313176 insignificant 1 1 insignificant -0.0555093 0.184815 lowCoverage 1 lowCoverage 0.74844 0.72771 0.031872 5 0.74760 0.71553 0.032064 8.4256e-02 0.79596 insignificant 1.0000e+00 1 insignificant 6.4923e-02 0.77069 insignificant 1.0000e+00 1 insignificant 0.0352437 3.7739e-01 lowCoverage 1.000000 lowCoverage 0.74844 0.81944 -0.0708765 5 0.74760 0.81878 -0.0711868 9.9606e-01 3.3213e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9553e-01 4.7159e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.09921927 2.3522e-02 lowCoverage 1.000000 lowCoverage 0.77479 0.72771 0.046340 5 0.77028 0.71553 0.054744 2.5312e-02 0.91819 weaklyHypermeth 1.0000e+00 1 insignificant 4.5023e-02 0.87105 weaklyHypermeth 1.0000e+00 1 insignificant 0.090753 5.5576e-02 lowCoverage 1.000000 lowCoverage 0.77479 0.81944 -0.04605980 5 0.77028 0.81878 -0.048507 9.6911e-01 0.1533734 insignificant 1.0000e+00 1.00000 insignificant 9.2822e-01 0.391476 insignificant 1.0000e+00 1 insignificant -0.043710 0.32741071 lowCoverage 1.00000 lowCoverage 0.72771 0.81944 -0.100212 5 0.71553 0.81878 -0.103250 0.99716 1.7416e-02 weaklyHypometh 1 9.1664e-01 insignificant 0.99721 1.8075e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.134463 0.00961662 lowCoverage 0.87424 lowCoverage chr12 61139850 61140850 115156 ENSG00000200814 0.74616 390 9 0.66489 398 11 0.67940 147 9 0.74796 331 10 0.81237 145 9 0.71987 183 9 0.75495 118 9 0.66669 184 9 0.74638 152 9 0.72067 178 9 0.73012 375 9 0.82937 66 9 0.86350 181 9 0.65815 113 9 0.71603 188 9 0.72721 67 9 0.81976 168 6 0.70616 375 11 0.72996 257 11 0.70475 167 11 0.76407 67 8 0.64506 159 9 0.68015 226 10 0.69429 93 9 0.72039 154 9 0.67485 291 9 0.66152 132 9 0.75227 91 10 0.76308 280 11 0.74701 383 9 0.68743 358 9 0.71668 222 9 0.57438 193 9 0.66903 197 9 0.672273 257 11 0.70926 69 7 0.595821 221 9 0.67962 382 9 0.73621 443 9 0.72125 372 9 0.73443 379 9 0.74057 319 9 0.75143 400 9 0.81302 0.72308 0.70476 0.80399 0.91446 0.75987 0.80200 0.70277 0.79483 0.75905 0.77150 0.82841 0.85303 0.79765 0.80790 0.87714 0.82489 0.76576 0.80170 0.76042 0.81484 0.67528 0.71907 0.70691 0.80052 0.81242 0.68638 0.74632 0.81248 0.79236 0.77415 0.76159 0.63926 0.67125 0.70841 0.70108 0.648129 0.71264 0.780866 0.75824 0.77594 0.78987 0.79858 9 0.78819 0.76669 0.0152749 9 0.72826 0.72798 0.00028353 0.2765260 0.744199 insignificant 1 1 insignificant 0.030928 0.953717 weaklyHypermeth 1 1 insignificant 0.0283180 0.112602 insignificant 1 insignificant 0.78819 0.67854 0.107274 9 0.72826 0.63997 0.088295 4.6110e-12 0.99995 weaklyHypermeth 5.7637e-10 1 weaklyHypermeth 1.0403e-09 1.00000 weaklyHypermeth 2.0806e-07 1 weaklyHypermeth 0.0871552 7.0939e-03 weaklyHypermeth 0.644900 insignificant 0.78819 0.78672 0.0055374 9 0.72826 0.73732 -0.0090585 3.4363e-01 3.2247e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7681e-01 3.8004e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00043968 9.7436e-01 insignificant 1.000000 insignificant 0.76669 0.67854 0.092830 9 0.72798 0.63997 0.088012 1.3423e-08 1.00000 weaklyHypermeth 1.6779e-06 1 weaklyHypermeth 3.1206e-06 1.00000 weaklyHypermeth 5.2009e-04 1 weaklyHypermeth 0.058837 4.2983e-02 weaklyHypermeth 1.000000 insignificant 0.76669 0.78672 -0.01487618 9 0.72798 0.73732 -0.009342 8.4247e-01 0.3280798 insignificant 1.0000e+00 1.00000 insignificant 9.3199e-01 0.086007 insignificant 1.0000e+00 1 insignificant -0.027878 0.04706733 weaklyHypometh 1.00000 insignificant 0.67854 0.78672 -0.103573 9 0.63997 0.73732 -0.097354 1.00000 2.0909e-10 weaklyHypometh 1 5.2272e-08 weaklyHypometh 1.00000 2.6338e-06 weaklyHypometh 1 6.5845e-04 weaklyHypometh -0.086716 0.00915152 weaklyHypometh 0.87424 insignificant chr12 61473616 61474616 115169 ENSG00000213352 0.57627 371 7 0.70324 195 8 0.62076 144 8 0.76650 240 7 0.74945 136 8 0.68976 318 8 0.75469 149 8 0.60413 125 8 0.63091 106 7 0.60015 106 7 0.71931 215 8 0.81453 87 7 0.72446 124 7 0.70139 39 5 0.78788 173 7 0.75511 62 6 0.70666 2075 7 0.75106 206 7 0.69604 173 7 0.76058 297 8 0.75926 82 7 0.64015 60 4 0.78340 178 7 0.58309 70 5 0.66718 39 4 0.68041 271 8 0.75466 117 8 0.67244 58 4 0.68394 95 7 0.74515 242 8 0.76135 288 8 0.77666 355 7 0.46055 177 7 0.26693 133 7 0.551190 150 7 0.59087 34 4 0.415310 156 8 0.63198 259 8 0.75305 360 8 0.81823 308 8 0.74800 370 8 0.80766 201 8 0.73271 299 8 0.72945 0.74727 0.66612 0.78662 0.74119 0.71160 0.74525 0.74573 0.68105 0.71462 0.71219 0.74539 0.72465 0.63615 0.73447 0.68103 0.64769 0.74099 0.74107 0.72781 0.74567 0.77255 0.72467 0.68239 0.69532 0.73536 0.71974 0.66878 0.61727 0.72193 0.76230 0.76025 0.50628 0.46033 0.64534 0.58737 0.559016 0.69094 0.830822 0.78383 0.78282 0.73165 0.74708 4 0.80696 0.74286 -0.0075579 7 0.72078 0.77945 -0.05867348 0.7596648 0.070424 insignificant 1 1 insignificant 0.775031 0.197407 insignificant 1 1 insignificant -0.0033317 0.889088 insignificant 1 insignificant 0.80704 0.56326 0.173375 7 0.72619 0.58663 0.139552 1.7349e-14 0.90900 weaklyHypermeth 2.4785e-12 1 weaklyHypermeth 9.5421e-08 0.92538 weaklyHypermeth 1.5904e-05 1 weaklyHypermeth 0.2195042 9.0043e-03 weaklyHypermeth 0.749736 insignificant 0.80696 0.83550 -0.0406652 7 0.72078 0.79126 -0.0704818 9.9673e-01 4.3327e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9921e-01 4.6695e-03 weaklyHypometh 1.0000e+00 0.9339041 insignificant -0.06628709 1.4166e-02 weaklyHypometh 1.000000 insignificant 0.74216 0.56326 0.173855 7 0.75739 0.58663 0.170759 7.0803e-09 0.99997 weaklyHypermeth 1.0115e-06 1 weaklyHypermeth 3.3025e-05 0.99988 weaklyHypermeth 4.7178e-03 1 weaklyHypermeth 0.222836 8.0507e-03 weaklyHypermeth 0.670889 insignificant 0.74286 0.83550 -0.03816395 7 0.77945 0.79126 -0.011808 9.2459e-01 0.2926679 insignificant 1.0000e+00 1.00000 insignificant 9.6954e-01 0.322709 insignificant 1.0000e+00 1 insignificant -0.062955 0.02665182 weaklyHypometh 1.00000 insignificant 0.56326 0.83585 -0.218542 8 0.58663 0.79038 -0.203748 1.00000 1.3640e-07 hypomethylated 1 2.2734e-05 hypomethylated 1.00000 2.2773e-06 hypomethylated 1 6.5845e-04 hypomethylated -0.285791 0.00256986 weaklyHypometh 0.51397 insignificant chr12 63554611 63555611 115220 TBC1D30 ENSG00000111490 0.96188 102 5 0.89087 128 5 0.85092 97 5 0.93897 86 5 0.90788 67 2 0.91747 280 5 0.93807 104 5 0.83016 105 5 0.66026 68 2 0.96304 91 5 0.84750 91 5 1.00000 49 5 0.95714 59 2 0.95667 55 5 0.80032 133 5 0.95139 58 5 NA 0 0 0.73508 149 5 0.87841 224 5 0.94811 159 5 0.82143 55 5 1.00000 6 0 0.90376 95 5 0.89191 41 2 0.66667 17 2 0.94674 171 5 0.74552 128 2 0.96095 65 5 0.87916 136 5 0.76218 170 5 0.79272 216 5 0.92660 159 5 0.77919 108 5 0.58625 132 2 0.666667 69 2 NA 0 0 0.761677 87 5 0.94603 210 5 0.87065 179 5 0.95934 118 5 0.83933 87 2 0.94394 226 5 0.88585 117 5 0.90968 0.81086 0.78785 0.97518 0.89121 0.87393 0.94405 0.92686 0.84036 0.89335 0.81268 1.00000 0.90153 0.96798 0.90704 0.94335 NA 0.92040 0.90145 0.93317 0.96276 0.99332 0.92698 0.73561 0.96308 0.95064 0.90094 0.90748 0.88866 0.86984 0.94261 0.89391 0.50210 0.47911 0.96220 NA 0.836856 0.87256 0.890528 0.93581 0.96213 0.91260 0.98034 2 0.90019 0.91263 -0.0111319 5 0.84207 0.76837 0.07370184 0.7421585 0.515436 insignificant 1 1 insignificant 0.654883 0.637851 insignificant 1 1 insignificant 0.0331336 0.357451 lowCoverage 1 lowCoverage 0.90019 0.77228 0.131481 5 0.84207 0.72185 0.120217 5.6974e-03 0.53919 weaklyHypermeth 3.1652e-01 1 insignificant 2.2873e-01 0.85916 insignificant 1.0000e+00 1 insignificant 0.1433081 7.5283e-02 lowCoverage 1.000000 lowCoverage 0.90057 0.91884 -0.0174062 5 0.91048 0.90362 0.0068603 4.8344e-01 3.2645e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.4725e-01 3.3654e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00855255 7.8176e-01 lowCoverage 1.000000 lowCoverage 0.91263 0.77228 0.134326 5 0.76837 0.72185 0.046516 5.2866e-02 0.73964 insignificant 1.0000e+00 1 insignificant 3.7725e-01 0.80469 insignificant 1.0000e+00 1 insignificant 0.110175 1.5210e-01 lowCoverage 1.000000 lowCoverage 0.91481 0.91884 0.00033408 5 0.92204 0.90362 0.018418 2.5483e-01 0.3916579 insignificant 1.0000e+00 1.00000 insignificant 4.2818e-01 0.718085 insignificant 1.0000e+00 1 insignificant -0.041686 0.27565839 lowCoverage 1.00000 lowCoverage 0.77355 0.91884 -0.142272 5 0.86622 0.90362 -0.037401 0.34079 1.5361e-01 insignificant 1 1.0000e+00 insignificant 0.48777 3.5230e-01 insignificant 1 1.0000e+00 insignificant -0.151861 0.06442191 lowCoverage 1.00000 lowCoverage chr12 64561007 64562007 115351 ENSG00000211577 0.62621 253 6 0.62582 177 6 0.56926 120 6 0.67868 255 6 0.75055 89 6 0.88973 346 6 0.47335 101 6 0.68278 216 6 0.64544 170 6 0.79359 150 6 0.68921 177 6 0.65236 75 5 0.71501 275 6 0.70000 80 6 0.70971 163 6 0.88571 23 3 0.62108 66 5 0.57233 306 6 0.72073 111 6 0.71714 280 6 0.69825 60 6 0.35332 189 5 0.58008 136 6 0.50621 83 6 0.78697 87 5 0.73265 272 6 0.56169 113 6 0.52351 81 5 0.74640 188 6 0.79483 281 6 0.66305 306 6 0.55037 371 6 0.10529 247 6 0.15993 122 6 0.000000 210 6 0.28485 48 5 0.017540 211 7 0.33410 348 6 0.65361 341 6 0.63106 207 6 0.38483 233 6 0.55562 176 6 0.62758 261 6 0.63251 0.73782 0.52650 0.59863 0.69212 0.86763 0.62259 0.68910 0.69703 0.78271 0.81620 0.58061 0.69298 0.62851 0.64811 0.90468 0.57764 0.56651 0.84759 0.70667 0.63927 0.23684 0.72771 0.44024 0.89218 0.71864 0.60335 0.62305 0.71666 0.73380 0.65004 0.51461 0.10381 0.15501 0.00000 0.23347 0.016561 0.35345 0.627297 0.60932 0.37266 0.55004 0.52629 5 0.69444 0.63313 0.0661461 6 0.64108 0.56477 0.07631517 0.0048154 0.936832 weaklyHypermeth 1 1 insignificant 0.088247 0.700849 insignificant 1 1 insignificant 0.0611561 0.187247 insignificant 1 insignificant 0.69475 0.16779 0.524483 6 0.68505 0.16217 0.522873 2.9829e-38 1.00000 hypermethylated 1.4915e-35 1 hypermethylated 7.0982e-15 1.00000 hypermethylated 3.5491e-12 1 hypermethylated 0.5356504 6.2938e-05 hypermethylated 0.020979 hypermethylated 0.69475 0.51478 0.1508818 6 0.68505 0.63018 0.0548686 1.8542e-06 9.8296e-01 weaklyHypermeth 3.7084e-04 1.00000000 weaklyHypermeth 3.7147e-05 9.7725e-01 weaklyHypermeth 9.2869e-03 1.0000000 weaklyHypermeth 0.11539637 7.8665e-02 insignificant 1.000000 insignificant 0.63430 0.16779 0.459423 6 0.64545 0.16217 0.483274 1.8163e-20 1.00000 hypermethylated 3.6327e-18 1 hypermethylated 9.8947e-12 1.00000 hypermethylated 4.9474e-09 1 hypermethylated 0.474494 4.0950e-05 hypermethylated 0.010399 hypermethylated 0.63430 0.51478 0.09247840 6 0.64545 0.63018 0.015270 5.9517e-03 0.7207240 weaklyHypermeth 8.5024e-01 1.00000 insignificant 9.6156e-03 0.903762 weaklyHypermeth 1.0000e+00 1 insignificant 0.054240 0.40872979 insignificant 1.00000 insignificant 0.16779 0.51478 -0.388427 6 0.16217 0.63018 -0.468004 1.00000 1.1134e-13 hypomethylated 1 3.7114e-11 hypomethylated 1.00000 1.9943e-08 hypomethylated 1 9.9716e-06 hypomethylated -0.420254 0.00032103 hypomethylated 0.16052 insignificant chr12 64561787 64562787 115352 ENSG00000197301 0.69662 821 14 0.66900 591 13 0.61692 279 14 0.73856 685 14 0.73137 221 13 0.88752 955 14 0.65129 293 14 0.76269 476 14 0.74364 377 13 0.83554 262 13 0.79534 491 14 0.62377 138 9 0.82134 384 13 0.71735 189 13 0.73861 326 13 0.88378 75 8 0.62108 66 5 0.63456 1035 13 0.82376 514 14 0.80140 680 13 0.80679 157 13 0.44377 247 11 0.60582 357 14 0.64729 181 13 0.84055 351 12 0.78841 671 13 0.61475 289 13 0.62461 166 10 0.68828 592 14 0.83419 794 14 0.79893 805 14 0.67573 865 14 0.17127 727 14 0.15895 474 14 0.124290 627 14 0.43581 277 10 0.055531 660 15 0.52911 913 14 0.61362 853 14 0.59907 557 13 0.44155 667 14 0.64063 636 13 0.51806 689 14 0.69712 0.77359 0.60258 0.70384 0.71008 0.89797 0.74072 0.77446 0.78436 0.81060 0.82098 0.73777 0.80875 0.74012 0.73660 0.88920 0.70890 0.65667 0.87662 0.80260 0.75508 0.45929 0.80584 0.54336 0.86263 0.78768 0.71295 0.78417 0.76748 0.79673 0.74831 0.64676 0.16839 0.15031 0.13239 0.37072 0.038816 0.56455 0.569702 0.59834 0.43566 0.61785 0.45239 10 0.77832 0.74721 0.0290329 14 0.72252 0.68314 0.03937490 0.0216263 0.937126 weaklyHypermeth 1 1 insignificant 0.278725 0.941924 insignificant 1 1 insignificant 0.0422804 0.299763 insignificant 1 insignificant 0.77871 0.28630 0.491721 14 0.77018 0.20552 0.564661 3.9561e-67 1.00000 hypermethylated 3.9561e-64 1 hypermethylated 5.3843e-24 1.00000 hypermethylated 5.3843e-21 1 hypermethylated 0.4938810 1.0460e-03 weaklyHypermeth 0.130745 insignificant 0.77849 0.52028 0.2408738 13 0.72536 0.59722 0.1281396 3.2732e-28 9.9999e-01 hypermethylated 3.2732e-25 1.00000000 hypermethylated 5.2807e-14 9.9999e-01 hypermethylated 5.2807e-11 1.0000000 hypermethylated 0.17712040 4.3757e-03 weaklyHypermeth 0.729292 insignificant 0.74771 0.28637 0.472562 14 0.69477 0.21580 0.478977 1.1133e-40 1.00000 hypermethylated 1.1133e-37 1 hypermethylated 5.0264e-18 1.00000 hypermethylated 5.0264e-15 1 hypermethylated 0.451601 1.0722e-03 weaklyHypermeth 0.153174 insignificant 0.74771 0.52028 0.22195553 13 0.69477 0.59722 0.097556 2.8538e-19 0.9900956 hypermethylated 2.2140e-16 1.00000 hypermethylated 3.6868e-08 0.999462 hypermethylated 3.6868e-05 1 hypermethylated 0.134840 0.02113439 weaklyHypermeth 1.00000 insignificant 0.28641 0.51987 -0.234964 13 0.22447 0.55555 -0.331083 1.00000 1.3527e-14 hypomethylated 1 1.3527e-11 hypomethylated 1.00000 1.5647e-08 hypomethylated 1 9.9716e-06 hypomethylated -0.316761 0.00764203 weaklyHypometh 0.84911 insignificant chr12 64745661 64746661 115398 ENSG00000213343 0.76923 71 5 0.79206 67 5 0.50000 24 4 0.89000 40 5 0.88571 23 1 0.77660 128 5 0.75000 20 0 0.96000 30 5 0.83333 15 1 0.86667 15 0 0.90000 87 5 1.00000 4 0 0.68333 28 4 0.37500 8 1 0.60000 5 1 1.00000 16 0 NA 0 0 0.50000 38 4 0.46667 15 1 0.88643 123 5 0.78000 30 5 NA 0 0 0.74167 27 1 0.90833 35 4 1.00000 1 0 0.77687 100 5 0.57381 27 4 1.00000 2 0 0.99000 24 1 0.84199 111 5 0.80513 177 5 0.93416 178 5 0.34613 71 5 0.26667 24 1 0.010391 206 5 NA 0 0 0.278551 101 5 0.34083 129 5 0.33603 225 5 0.48163 187 5 0.39167 60 5 0.85333 19 1 0.24948 153 5 0.84615 0.57143 0.50000 0.65000 0.42857 0.80723 0.75000 1.00000 0.66667 0.66667 0.86364 NA 0.75000 0.37500 0.60000 NA NA 0.50000 0.46667 0.90476 0.90000 NA 0.87500 0.66667 1.00000 0.68571 0.83333 1.00000 0.95000 0.79545 0.83673 0.92188 0.18519 0.00000 0.00000 NA 0.068182 0.03750 0.072289 0.33898 0.62500 0.26667 0.32500 0 0.78996 0.83848 -0.0502630 3 0.80700 0.83756 -0.03056443 0.9213662 0.219010 lowCoverage 1 1 lowCoverage 0.479969 0.135868 lowCoverage 1 1 lowCoverage -0.0904380 0.136660 lowCoverage 1 lowCoverage 0.78996 0.13559 0.663126 3 0.80700 0.16699 0.640010 4.2587e-26 1.00000 lowCoverage 8.5174e-24 1 lowCoverage 4.7874e-11 1.00000 lowCoverage 1.1969e-08 1 lowCoverage 0.5112246 1.0702e-04 lowCoverage 0.021405 lowCoverage 0.78996 0.34627 0.4597600 3 0.80700 0.36522 0.4417737 9.1193e-18 1.0000e+00 lowCoverage 3.0398e-15 1.00000000 lowCoverage 4.1056e-06 1.0000e+00 lowCoverage 1.3685e-03 1.0000000 lowCoverage 0.29731111 4.3204e-02 lowCoverage 1.000000 lowCoverage 0.83848 0.13559 0.696004 5 0.83756 0.16699 0.670574 3.5131e-25 1.00000 hypermethylated 8.7827e-23 1 hypermethylated 6.2693e-09 1.00000 hypermethylated 1.5673e-06 1 hypermethylated 0.601663 5.1996e-05 lowCoverage 0.010399 lowCoverage 0.83848 0.34627 0.49490135 5 0.83756 0.36522 0.472338 6.6421e-19 1.0000000 hypermethylated 2.2140e-16 1.00000 hypermethylated 3.5852e-05 0.999999 hypermethylated 1.1951e-02 1 hypermethylated 0.387749 0.01695294 lowCoverage 1.00000 lowCoverage 0.13559 0.34627 -0.202058 5 0.16699 0.36522 -0.198236 0.99991 6.8301e-04 hypomethylated 1 5.2539e-02 hypomethylated 0.99506 1.1479e-02 weaklyHypometh 1 7.1744e-01 insignificant -0.213913 0.12529737 lowCoverage 1.00000 lowCoverage chr12 64745966 64746966 115399 ENSG00000213343 0.76923 71 5 0.79206 67 5 0.50000 24 4 0.89000 40 5 0.88571 23 1 0.77660 128 5 0.75000 20 0 0.96000 30 5 0.83333 15 1 0.86667 15 0 0.90000 87 5 1.00000 4 0 0.68333 28 4 0.37500 8 1 0.60000 5 1 1.00000 16 0 NA 0 0 0.50000 38 4 0.46667 15 1 0.88643 123 5 0.78000 30 5 NA 0 0 0.74167 27 1 0.90833 35 4 1.00000 1 0 0.77687 100 5 0.57381 27 4 1.00000 2 0 0.99000 24 1 0.84199 111 5 0.80513 177 5 0.93416 178 5 0.34613 71 5 0.26667 24 1 0.010391 206 5 NA 0 0 0.278551 101 5 0.34083 129 5 0.33603 225 5 0.48163 187 5 0.39167 60 5 0.85333 19 1 0.24948 153 5 0.84615 0.57143 0.50000 0.65000 0.42857 0.80723 0.75000 1.00000 0.66667 0.66667 0.86364 NA 0.75000 0.37500 0.60000 NA NA 0.50000 0.46667 0.90476 0.90000 NA 0.87500 0.66667 1.00000 0.68571 0.83333 1.00000 0.95000 0.79545 0.83673 0.92188 0.18519 0.00000 0.00000 NA 0.068182 0.03750 0.072289 0.33898 0.62500 0.26667 0.32500 0 0.78996 0.83848 -0.0502630 3 0.80700 0.83756 -0.03056443 0.9213662 0.219010 lowCoverage 1 1 lowCoverage 0.479969 0.135868 lowCoverage 1 1 lowCoverage -0.0904380 0.136660 lowCoverage 1 lowCoverage 0.78996 0.13559 0.663126 3 0.80700 0.16699 0.640010 4.2587e-26 1.00000 lowCoverage 8.5174e-24 1 lowCoverage 4.7874e-11 1.00000 lowCoverage 1.1969e-08 1 lowCoverage 0.5112246 1.0702e-04 lowCoverage 0.021405 lowCoverage 0.78996 0.34627 0.4597600 3 0.80700 0.36522 0.4417737 9.1193e-18 1.0000e+00 lowCoverage 3.0398e-15 1.00000000 lowCoverage 4.1056e-06 1.0000e+00 lowCoverage 1.3685e-03 1.0000000 lowCoverage 0.29731111 4.3204e-02 lowCoverage 1.000000 lowCoverage 0.83848 0.13559 0.696004 5 0.83756 0.16699 0.670574 3.5131e-25 1.00000 hypermethylated 8.7827e-23 1 hypermethylated 6.2693e-09 1.00000 hypermethylated 1.5673e-06 1 hypermethylated 0.601663 5.1996e-05 lowCoverage 0.010399 lowCoverage 0.83848 0.34627 0.49490135 5 0.83756 0.36522 0.472338 6.6421e-19 1.0000000 hypermethylated 2.2140e-16 1.00000 hypermethylated 3.5852e-05 0.999999 hypermethylated 1.1951e-02 1 hypermethylated 0.387749 0.01695294 lowCoverage 1.00000 lowCoverage 0.13559 0.34627 -0.202058 5 0.16699 0.36522 -0.198236 0.99991 6.8301e-04 hypomethylated 1 5.2539e-02 hypomethylated 0.99506 1.1479e-02 weaklyHypometh 1 7.1744e-01 insignificant -0.213913 0.12529737 lowCoverage 1.00000 lowCoverage chr12 68172716 68173716 115534 ENSG00000205128 0.70117 56 6 0.77541 91 6 0.58333 33 5 0.77937 63 6 0.35833 38 5 0.58500 67 5 0.81220 61 6 0.68590 62 5 0.73884 42 5 0.90278 42 4 0.82228 170 6 0.75000 9 0 0.75284 98 6 0.78312 57 5 0.60833 70 5 0.66667 31 4 0.09091 22 1 0.67815 49 5 0.76410 64 6 0.69279 53 6 0.71429 31 4 1.00000 9 0 0.76068 38 2 0.88435 45 5 0.83333 15 1 0.78447 128 6 0.72629 65 4 0.70000 11 0 0.87446 48 6 0.77937 104 6 0.65668 76 5 0.70707 59 5 0.66243 63 6 0.77922 46 6 0.595991 64 6 0.50000 3 0 0.617007 44 5 0.81855 86 6 0.86932 69 6 0.78733 64 6 0.77176 78 6 0.91667 12 0 0.78889 70 6 0.72414 0.69970 0.81699 0.77834 0.47320 0.57451 0.77568 0.66968 0.84244 0.90523 0.80929 0.84314 0.78602 0.75792 0.66700 0.67974 NA 0.68201 0.78522 0.71810 0.68627 0.92709 0.78180 0.79015 0.80392 0.72149 0.80116 0.73835 0.90315 0.80317 0.65492 0.70766 0.68487 0.81411 0.64202 0.70679 0.569094 0.84113 0.843038 0.77349 0.80910 0.90196 0.79869 0 0.73599 0.78696 -0.0281358 5 0.68413 0.72359 -0.03946461 0.9976482 0.137472 insignificant 1 1 insignificant 0.998805 0.089402 insignificant 1 1 insignificant -0.1085073 0.034856 lowCoverage 1 lowCoverage 0.73756 0.72549 0.019879 6 0.71293 0.74591 -0.032983 1.8789e-01 0.67693 insignificant 1.0000e+00 1 insignificant 2.1103e-01 0.86764 insignificant 1.0000e+00 1 insignificant 0.0143752 8.2327e-01 lowCoverage 1.000000 lowCoverage 0.73617 0.79522 -0.0606691 6 0.68631 0.83396 -0.1476490 9.8874e-01 3.8830e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9826e-01 1.0573e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.15021626 6.2418e-03 lowCoverage 0.891686 lowCoverage 0.78491 0.72549 0.042101 5 0.64462 0.74591 -0.101290 5.7829e-02 0.84372 insignificant 1.0000e+00 1 insignificant 4.6824e-02 0.96499 weaklyHypermeth 1.0000e+00 1 insignificant 0.122883 5.8329e-02 lowCoverage 1.000000 lowCoverage 0.78822 0.79522 -0.03265936 5 0.81404 0.83396 -0.019918 9.1814e-01 0.3393725 insignificant 1.0000e+00 1.00000 insignificant 9.2664e-01 0.442565 insignificant 1.0000e+00 1 insignificant -0.041709 0.31703234 lowCoverage 1.00000 lowCoverage 0.72459 0.79310 -0.083114 6 0.70356 0.77862 -0.075052 0.98666 5.2088e-02 insignificant 1 1.0000e+00 insignificant 0.99950 7.0786e-03 weaklyHypometh 1 6.3071e-01 insignificant -0.164591 0.01949369 lowCoverage 1.00000 lowCoverage chr12 70265773 70266773 115609 TSPAN8 ENSG00000127324 0.80506 495 14 0.85843 153 11 0.79410 142 11 0.84108 360 14 0.93750 86 8 0.82996 447 15 0.76628 125 8 0.87679 148 10 0.94256 96 6 0.82018 113 10 0.86627 274 15 0.82018 81 8 0.86940 140 10 NA 0 0 0.79471 147 10 0.85826 66 5 0.72872 109 8 0.86672 354 14 0.80844 151 13 0.85281 355 15 0.82556 42 2 0.88577 129 10 0.84475 284 14 0.85513 83 10 0.86125 117 9 0.85015 284 14 0.86127 139 14 0.84524 58 5 0.82919 140 12 0.78617 274 14 0.80141 271 14 0.84836 474 15 0.72088 178 11 0.70579 147 10 0.784910 258 15 0.83744 107 9 0.887610 84 8 0.75562 320 15 0.86501 405 14 0.88573 387 14 0.82808 416 14 0.90381 364 14 0.89143 397 14 0.85724 0.83505 0.76630 0.83744 0.93686 0.85841 0.89574 0.91409 0.89109 0.88661 0.87359 0.80636 0.82963 NA 0.90047 0.84539 0.82278 0.85448 0.88892 0.85003 0.84702 0.92034 0.85880 0.81859 0.85881 0.86997 0.82466 0.79758 0.85723 0.82106 0.81827 0.87562 0.79927 0.79471 0.80296 0.86885 0.866322 0.83323 0.897875 0.89739 0.81833 0.90285 0.89239 6 0.85290 0.84619 0.0030391 14 0.84979 0.81949 0.03030169 0.2864154 0.463158 insignificant 1 1 insignificant 0.315717 0.724141 insignificant 1 1 insignificant -0.0023730 0.870035 insignificant 1 insignificant 0.85290 0.80256 0.053575 15 0.84979 0.79126 0.058530 8.5720e-07 0.99763 weaklyHypermeth 7.7927e-05 1 weaklyHypermeth 1.0242e-03 0.99842 weaklyHypermeth 9.3107e-02 1 weaklyHypermeth 0.0567714 1.1046e-01 insignificant 1.000000 insignificant 0.85290 0.88217 -0.0276961 14 0.84979 0.88189 -0.0321067 9.9892e-01 1.6172e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9373e-01 2.9857e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03599944 6.8330e-02 insignificant 1.000000 insignificant 0.84619 0.80256 0.050437 14 0.81949 0.79126 0.028228 5.5677e-06 0.98437 weaklyHypermeth 5.5677e-04 1 weaklyHypermeth 1.8760e-03 0.95343 weaklyHypermeth 1.8760e-01 1 insignificant 0.059144 9.4769e-02 insignificant 1.000000 insignificant 0.84619 0.88217 -0.03211318 14 0.81949 0.88189 -0.062408 9.9969e-01 0.0073757 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9816e-01 0.128134 insignificant 1.0000e+00 1 insignificant -0.033626 0.06555303 insignificant 1.00000 insignificant 0.80256 0.88217 -0.081573 14 0.79126 0.88189 -0.090636 0.99997 5.2345e-08 weaklyHypometh 1 1.0469e-05 weaklyHypometh 0.99988 3.9721e-04 weaklyHypometh 1 6.6202e-02 weaklyHypometh -0.092771 0.02159256 weaklyHypometh 1.00000 insignificant chr12 72566865 72567865 115780 ENSG00000201809 0.75691 385 12 0.77567 249 12 0.75155 200 12 0.81645 226 11 0.88958 57 7 0.82356 314 12 0.75720 128 9 0.74022 204 11 0.74239 72 4 0.76853 159 11 0.80687 385 12 0.62457 78 5 0.81707 246 12 NA 0 0 0.79720 134 12 0.78733 101 8 0.75676 113 8 0.78719 198 12 0.74889 249 12 0.81895 281 12 0.80574 61 4 0.89256 64 7 0.81990 258 12 0.79444 69 7 0.80519 81 8 0.79645 360 12 0.81770 127 8 0.69583 39 3 0.81693 208 12 0.77233 336 12 0.68860 308 11 0.83800 486 12 0.78042 245 11 0.68634 191 12 0.705830 237 12 0.87159 77 8 0.796296 65 6 0.80310 371 11 0.84429 324 12 0.83227 402 12 0.82431 249 11 0.85133 311 8 0.84717 332 11 0.76004 0.79351 0.75658 0.85622 0.93367 0.82132 0.78726 0.74986 0.75574 0.80839 0.80889 0.70580 0.82043 NA 0.83184 0.86058 0.77005 0.84422 0.78143 0.82615 0.82034 0.89055 0.84061 0.70508 0.86569 0.82378 0.79517 0.79978 0.79806 0.80956 0.76057 0.85295 0.74425 0.69531 0.74704 0.85638 0.804422 0.82055 0.861354 0.84157 0.82101 0.87155 0.85494 3 0.78566 0.84189 -0.0265671 12 0.78184 0.81118 -0.02933920 0.9997178 0.015619 weaklyHypometh 1 1 insignificant 0.943455 0.015447 weaklyHypometh 1 1 insignificant -0.0181010 0.380732 insignificant 1 insignificant 0.78566 0.80017 0.034237 12 0.78184 0.75648 0.025361 1.5275e-02 0.84776 weaklyHypermeth 8.0395e-01 1 insignificant 2.4568e-01 0.40131 insignificant 1.0000e+00 1 insignificant 0.0032749 9.1707e-01 insignificant 1.000000 insignificant 0.78566 0.79357 -0.0576948 12 0.78184 0.84090 -0.0590578 9.9996e-01 6.3723e-07 weaklyHypometh 1.0000e+00 0.00063723 weaklyHypometh 9.9999e-01 1.7295e-06 weaklyHypometh 1.0000e+00 0.0017295 weaklyHypometh -0.06266893 8.8144e-05 weaklyHypometh 0.088144 weaklyHypometh 0.84189 0.80017 0.059943 12 0.81118 0.75648 0.054700 1.2077e-03 0.99947 weaklyHypermeth 8.2384e-02 1 weaklyHypermeth 1.5860e-01 0.98451 insignificant 1.0000e+00 1 insignificant 0.021376 5.2470e-01 insignificant 1.000000 insignificant 0.84189 0.79357 -0.02573422 12 0.81118 0.84090 -0.029719 9.9738e-01 0.0134081 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9333e-01 0.059688 insignificant 1.0000e+00 1 insignificant -0.044568 0.02132636 weaklyHypometh 1.00000 insignificant 0.80017 0.79357 -0.082642 12 0.75648 0.84090 -0.084419 1.00000 9.4926e-06 weaklyHypometh 1 1.1866e-03 weaklyHypometh 0.99958 2.0145e-03 weaklyHypometh 1 2.5182e-01 insignificant -0.065944 0.06393725 insignificant 1.00000 insignificant chr12 73818860 73819860 115832 ENSG00000210718 0.82640 314 10 0.69321 256 10 0.67862 186 10 0.77284 228 10 0.74125 207 10 0.77802 326 10 0.68866 232 10 0.62459 199 10 0.67660 161 8 0.69432 168 10 0.74246 413 10 0.69556 101 10 0.69570 248 10 0.82028 157 10 0.74664 197 10 0.80994 145 10 0.77579 1917 9 0.83365 276 10 0.72443 170 9 0.78342 254 7 0.75053 41 2 0.72675 57 5 0.73556 256 10 0.71398 96 7 0.77091 157 6 0.76045 216 7 0.62226 184 7 0.62439 77 6 0.64755 214 10 0.68950 189 7 0.77220 223 7 0.74195 272 7 0.56253 283 10 0.73173 182 10 0.657169 236 9 0.71270 48 6 0.654615 148 7 0.73229 248 7 0.77487 253 10 0.83569 260 10 0.76993 322 10 0.79464 269 9 0.79525 231 10 0.84840 0.74429 0.73731 0.80137 0.80134 0.82956 0.80645 0.75328 0.80015 0.77983 0.79801 0.76511 0.76140 0.83241 0.79069 0.85040 0.81383 0.84888 0.79136 0.79534 0.90665 0.83350 0.77304 0.79784 0.78363 0.80853 0.77698 0.68095 0.76331 0.79818 0.77975 0.79446 0.72516 0.77711 0.74955 0.79604 0.737725 0.73348 0.832909 0.84822 0.81064 0.83737 0.85072 6 0.79269 0.77750 0.0211530 9 0.75744 0.68496 0.07247769 0.0131867 0.979632 weaklyHypermeth 1 1 insignificant 0.132260 0.481247 insignificant 1 1 insignificant 0.0271141 0.199128 insignificant 1 insignificant 0.79269 0.73712 0.053532 10 0.75744 0.63021 0.127232 6.3903e-08 0.96236 weaklyHypermeth 7.1003e-06 1 weaklyHypermeth 5.7635e-03 0.94521 weaklyHypermeth 4.2073e-01 1 insignificant 0.0649454 6.2013e-02 insignificant 1.000000 insignificant 0.79255 0.82397 -0.0399720 10 0.74549 0.81528 -0.0697823 9.9603e-01 8.7212e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9997e-01 2.1235e-03 weaklyHypometh 1.0000e+00 0.5308789 insignificant -0.05395654 7.3745e-03 weaklyHypometh 0.921809 insignificant 0.77750 0.73712 0.038240 9 0.68496 0.63021 0.054754 5.1260e-04 0.83429 weaklyHypermeth 4.2716e-02 1 weaklyHypermeth 9.1190e-03 0.83134 weaklyHypermeth 7.0146e-01 1 insignificant 0.037831 2.5432e-01 insignificant 1.000000 insignificant 0.77952 0.82397 -0.05557657 9 0.71693 0.81528 -0.098344 9.9987e-01 0.0016357 weaklyHypometh 1.0000e+00 0.81783 insignificant 9.9672e-01 0.014938 weaklyHypometh 1.0000e+00 1 insignificant -0.081071 0.00094053 weaklyHypometh 0.47026 insignificant 0.74558 0.82397 -0.088932 10 0.68750 0.81528 -0.127772 0.99913 1.7179e-05 weaklyHypometh 1 1.9088e-03 weaklyHypometh 0.99811 2.8788e-03 weaklyHypometh 1 2.8788e-01 insignificant -0.118902 0.00496651 weaklyHypometh 0.82775 insignificant chr12 76147733 76148733 115913 ENSG00000210743 0.88261 250 7 0.87951 90 6 0.73331 127 8 0.94002 163 9 0.89137 38 4 0.87145 192 8 0.63558 84 6 0.96086 78 6 0.81221 64 8 0.92540 92 8 0.88962 199 8 0.78413 64 5 0.95469 83 6 NA 0 0 0.92365 93 8 0.86667 58 7 0.75463 55 3 0.90454 126 7 0.89779 88 8 0.80342 225 8 0.72963 35 4 0.94583 42 4 0.90920 132 9 0.95040 41 5 0.90388 41 4 0.91552 148 8 0.89687 40 5 0.84167 45 4 0.95806 72 6 0.84071 133 8 0.94221 99 8 0.89666 244 8 0.86701 92 6 0.78815 93 6 0.816390 207 8 0.90530 48 4 0.839918 61 5 0.84692 122 8 0.93083 207 9 0.93473 279 9 0.94223 160 7 0.92601 208 7 0.95412 184 9 0.87309 0.81652 0.77785 0.91338 0.92088 0.84243 0.74644 0.93256 0.76930 0.91703 0.88927 0.80261 0.92966 NA 0.90485 0.92637 0.78608 0.90093 0.87383 0.81553 0.77175 0.92733 0.90364 0.91270 0.90215 0.89564 0.90198 0.82043 0.91448 0.88597 0.92625 0.87657 0.82897 0.70284 0.79984 0.88890 0.848002 0.88499 0.938747 0.90039 0.89492 0.92138 0.96197 3 0.87045 0.88993 -0.0219965 8 0.87151 0.88970 -0.01818675 0.8563576 0.125068 insignificant 1 1 insignificant 0.968909 0.039192 weaklyHypometh 1 1 insignificant -0.0357220 0.194855 insignificant 1 insignificant 0.87045 0.83788 0.037040 8 0.87151 0.82854 0.042977 1.7325e-02 0.99572 weaklyHypermeth 8.6623e-01 1 insignificant 2.9184e-01 0.91177 insignificant 1.0000e+00 1 insignificant 0.0145508 5.7508e-01 insignificant 1.000000 insignificant 0.87045 0.92775 -0.0619835 6 0.87151 0.93961 -0.0680987 1.0000e+00 4.0178e-04 weaklyHypometh 1.0000e+00 0.13392833 insignificant 1.0000e+00 5.8659e-04 weaklyHypometh 1.0000e+00 0.1955302 insignificant -0.07908805 7.9225e-04 weaklyHypometh 0.264084 insignificant 0.88993 0.83788 0.059376 8 0.88970 0.82854 0.061164 1.4608e-03 0.99189 weaklyHypermeth 8.5929e-02 1 weaklyHypermeth 2.6035e-02 0.98894 weaklyHypermeth 1.0000e+00 1 insignificant 0.050273 6.1789e-02 insignificant 1.000000 insignificant 0.88993 0.92775 -0.03934639 6 0.88970 0.93961 -0.049912 9.9905e-01 0.0106336 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.9988e-01 0.135270 insignificant 1.0000e+00 1 insignificant -0.043366 0.04302287 weaklyHypometh 1.00000 insignificant 0.83788 0.92775 -0.098004 6 0.82854 0.93961 -0.111076 1.00000 4.4701e-07 weaklyHypometh 1 6.3859e-05 weaklyHypometh 0.99974 1.0219e-03 weaklyHypometh 1 1.4599e-01 insignificant -0.093639 0.00173841 weaklyHypometh 0.51397 insignificant chr12 82787979 82788979 116301 ENSG00000213270 0.76084 240 7 0.56619 88 7 0.68384 152 7 0.86183 110 7 0.56250 33 6 0.86111 183 6 0.66162 70 6 0.80807 74 6 0.79318 66 6 0.65857 106 6 0.67838 106 6 0.65705 73 6 0.73535 79 6 NA 0 0 0.87198 95 6 0.77273 66 6 0.50748 90 6 0.71667 93 7 0.50841 74 6 0.79539 189 6 0.66296 36 4 0.75675 45 5 0.62543 98 6 0.57143 46 6 0.86667 30 6 0.87856 81 6 0.73773 54 6 0.72500 32 4 0.38426 62 6 0.81441 106 7 0.76641 150 7 0.54379 292 6 0.71471 122 7 0.81130 94 6 0.82955 139 7 0.80000 41 6 0.85823 71 6 0.79909 107 6 0.87137 303 7 0.87885 216 6 0.73901 140 7 0.84596 243 6 0.80802 121 6 0.75342 0.53181 0.64033 0.85372 0.61156 0.83237 0.69400 0.79693 0.76238 0.69010 0.69357 0.65905 0.71674 NA 0.87820 0.76491 0.54615 0.66980 0.49617 0.74805 0.70514 0.70110 0.61738 0.57732 0.89140 0.84613 0.71344 0.76299 0.42315 0.81427 0.71227 0.63864 0.75484 0.80271 0.84316 0.77491 0.86790 0.76756 0.83713 0.86230 0.69579 0.81665 0.77678 3 0.72421 0.68992 0.036361 6 0.74183 0.70597 0.035865 0.12880 0.98351 insignificant 1 1 insignificant 0.56144 0.822198 insignificant 1 1 insignificant 0.014033 0.778947 insignificant 1 insignificant 0.72421 0.79268 -0.0758289 6 0.74183 0.77684 -0.035005 1.6577e-01 0.0010455 weaklyHypometh 1.0000e+00 0.52277 insignificant 9.8037e-01 0.0019061 weaklyHypometh 1.0000e+00 0.95305 insignificant -0.093663 9.7153e-03 weaklyHypometh 1.0000000 insignificant 0.72421 0.82698 -0.1056629 6 0.74183 0.84189 -0.100059 9.9998e-01 0.00017706 weaklyHypometh 1.00000000 0.08853 weaklyHypometh 0.99992627 0.00032882 weaklyHypometh 1.00000 0.16441 insignificant -0.120159 0.0057597 weaklyHypometh 1 insignificant 0.68992 0.79268 -0.114604 6 0.70597 0.77684 -0.070869 8.7609e-01 0.00025564 weaklyHypometh 1.0000e+00 0.12782 insignificant 9.9640e-01 0.0087849 weaklyHypometh 1.0000e+00 1 insignificant -0.107696 3.4031e-02 weaklyHypometh 1.00000000 insignificant 0.68992 0.82698 -0.138830 6 0.70597 0.84189 -0.135924 9.9999e-01 7.5757e-05 weaklyHypometh 1.0000e+00 0.037878 weaklyHypometh 9.9990e-01 0.0017871 weaklyHypometh 1.000000 0.89357 insignificant -0.134192 0.0151254 weaklyHypometh 1 insignificant 0.79268 0.82698 -0.038661 7 0.77684 0.84189 -0.065055 0.78143 6.2872e-03 weaklyHypometh 1 4.8363e-01 insignificant 0.69843 1.7724e-01 insignificant 1 1.00000000 insignificant -0.026496 0.43601254 insignificant 1.00000 insignificant chr12 84104764 84105764 116343 LRRIQ1 ENSG00000133640 0.80744 225 6 0.61097 135 6 0.60904 109 4 0.82171 185 6 0.72143 57 2 0.76598 189 6 0.70625 53 2 0.67775 103 6 0.56228 64 2 0.87311 48 2 0.77779 150 6 0.65417 34 2 0.75370 92 6 0.81920 77 6 0.67869 73 6 0.11329 34 2 0.87500 8 1 0.74124 194 6 0.39065 104 2 0.67812 98 6 0.63571 28 2 0.80000 9 0 0.72471 120 6 0.71667 26 2 0.70833 14 0 0.73590 141 6 0.50385 53 5 0.87302 22 2 0.61321 102 2 0.74558 131 6 0.63453 151 6 0.70529 101 6 0.60813 79 6 0.60578 56 6 0.46454 89 2 0.16667 5 0 0.69066 76 2 0.62304 106 6 0.86250 183 6 0.73550 184 6 0.83697 175 6 0.83114 205 6 0.74843 170 6 0.74799 0.56271 0.53039 0.63208 0.66550 0.67358 0.70425 0.57726 0.56069 0.68839 0.68045 0.49764 0.60451 0.66355 0.59047 0.26982 NA 0.66220 0.59605 0.62407 0.46092 0.90480 0.61928 0.64906 0.82075 0.61413 0.60883 0.61426 0.58377 0.67409 0.51612 0.70267 0.53297 0.38697 0.49894 0.28145 0.46655 0.54726 0.71355 0.65942 0.66521 0.73454 0.66080 2 0.63583 0.63697 0.020680 6 0.68551 0.65517 0.030347 0.17259 0.92758 insignificant 1 1 insignificant 0.55865 0.680943 insignificant 1 1 insignificant -0.017844 0.712294 lowCoverage 1 lowCoverage 0.63623 0.48905 0.1458451 2 0.73244 0.62380 0.108640 2.3452e-05 0.9484157 lowCoverage 1.8040e-03 1.00000 lowCoverage 1.1067e-03 0.9379703 lowCoverage 1.5810e-01 1.00000 lowCoverage 0.155420 1.1442e-01 lowCoverage 1.0000000 lowCoverage 0.63560 0.65431 -0.0606839 6 0.67745 0.78364 -0.106187 9.4536e-01 0.01895034 weaklyHypometh 1.00000000 1.00000 insignificant 0.88512145 0.00468672 weaklyHypometh 1.00000 1.00000 insignificant -0.121018 0.0175281 lowCoverage 1 lowCoverage 0.63789 0.48905 0.125834 2 0.70497 0.62380 0.081175 3.0391e-04 0.96760035 lowCoverage 1.7877e-02 1.00000 lowCoverage 1.0532e-03 0.9964598 lowCoverage 1.5402e-01 1 lowCoverage 0.173264 7.8969e-02 lowCoverage 1.00000000 lowCoverage 0.63657 0.65431 -0.077352 6 0.61206 0.78364 -0.171578 9.9831e-01 3.7849e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8040e-01 0.0828232 insignificant 1.000000 1.00000 insignificant -0.103174 0.0167943 lowCoverage 1 lowCoverage 0.48905 0.65351 -0.194257 2 0.62380 0.79485 -0.171057 0.99997 5.5143e-06 lowCoverage 1 1.8381e-03 lowCoverage 1.00000 4.4463e-05 lowCoverage 1 0.02223132 lowCoverage -0.276438 0.01491962 lowCoverage 1.00000 lowCoverage chr12 88293170 88294170 116565 DUSP6 ENSG00000139318 0.69543 112 3 0.54091 148 6 0.48316 42 3 0.64478 112 6 0.69167 40 5 0.66355 94 6 0.31429 40 2 0.64561 94 6 0.72143 50 4 0.74830 26 3 0.62070 144 6 0.72778 17 1 0.68842 89 6 0.72271 58 5 0.63653 65 6 0.52778 19 2 NA 0 0 0.55783 186 6 0.78690 70 3 0.73228 67 3 0.81190 30 3 0.80000 14 0 0.86558 48 3 0.78571 34 4 0.79652 59 2 0.58713 113 6 0.70556 60 6 0.68707 17 1 0.61607 70 3 0.66183 135 6 0.57926 109 6 0.69565 99 6 0.58226 85 6 0.70007 68 6 0.66667 68 6 0.32143 19 2 0.56369 86 6 0.58148 123 6 0.62829 70 6 0.57370 108 5 0.61837 112 6 0.61111 60 2 0.65697 119 6 0.72372 0.56444 0.47992 0.68230 0.66827 0.67214 0.47631 0.68446 0.69277 0.84739 0.60398 0.74940 0.73583 0.73367 0.64689 0.52209 NA 0.68093 0.76888 0.72532 0.83236 0.74809 0.87453 0.83821 0.77215 0.63335 0.75315 0.68158 0.62500 0.68945 0.63170 0.70954 0.62573 0.74570 0.67520 0.42771 0.58463 0.62383 0.65091 0.60334 0.66430 0.69076 0.68150 0 0.67823 0.68655 -0.017140 6 0.58210 0.70399 -0.121886 0.94032 0.15803 insignificant 1 1 insignificant 0.99436 0.042977 weaklyHypometh 1 1 insignificant -0.076547 0.053296 lowCoverage 1 lowCoverage 0.67986 0.63697 0.0280417 6 0.64579 0.60981 0.035972 7.9591e-02 0.8067855 insignificant 1.0000e+00 1.00000 insignificant 1.4304e-01 0.8405616 insignificant 1.0000e+00 1.00000 insignificant 0.070211 2.7942e-01 lowCoverage 1.0000000 lowCoverage 0.67986 0.69936 0.0023975 6 0.64579 0.62753 0.018258 3.9196e-01 0.53423676 insignificant 1.00000000 1.00000 insignificant 0.19344683 0.77394017 insignificant 1.00000 1.00000 insignificant 0.021789 0.4653519 lowCoverage 1 lowCoverage 0.68575 0.63697 0.042936 6 0.65465 0.60981 0.044840 3.5791e-02 0.89418358 weaklyHypermeth 1.0000e+00 1.00000 insignificant 1.9892e-02 0.9925855 weaklyHypermeth 1.0000e+00 1 insignificant 0.146758 4.3641e-02 lowCoverage 1.00000000 lowCoverage 0.68575 0.69936 0.021370 6 0.65465 0.62753 0.027125 3.0336e-01 8.2239e-01 insignificant 1.0000e+00 1.000000 insignificant 4.3062e-02 0.9880275 weaklyHypermeth 1.000000 1.00000 insignificant 0.098336 0.0059581 lowCoverage 1 lowCoverage 0.63697 0.69936 -0.020593 6 0.60981 0.62753 -0.017714 0.74536 3.8902e-01 insignificant 1 1.0000e+00 insignificant 0.79873 5.2341e-01 insignificant 1 1.00000000 insignificant -0.048422 0.42204288 insignificant 1.00000 insignificant chr12 91206070 91207070 116758 ENSG00000223333 0.70773 203 6 0.64466 215 6 0.69543 111 6 0.72035 140 6 0.73128 72 6 0.71541 221 6 0.69904 91 6 0.76965 151 6 0.81469 107 6 0.70165 93 6 0.82023 216 6 0.80354 56 5 0.91937 104 6 0.83922 52 5 0.80673 95 4 0.60366 44 3 0.92857 43 2 0.80311 142 6 0.84144 161 6 0.73712 220 6 0.86366 53 6 0.88210 84 6 0.72625 132 6 0.88741 55 3 0.86580 74 6 0.73804 227 6 0.52712 83 6 0.81250 47 6 0.87916 129 5 0.80271 189 6 0.71138 190 6 0.79714 238 6 0.77756 148 6 0.74476 91 6 0.67871 153 6 0.70547 35 2 0.60378 83 6 0.81169 184 6 0.79080 164 6 0.80307 189 6 0.79450 135 6 0.90244 122 3 0.81913 149 6 0.75452 0.72570 0.67804 0.74665 0.81872 0.76890 0.72713 0.77731 0.78481 0.81686 0.82297 0.76700 0.88973 0.83524 0.83534 0.69342 0.87299 0.78135 0.84959 0.85166 0.86575 0.87772 0.82147 0.81543 0.86302 0.80578 0.68607 0.79111 0.84281 0.81028 0.89004 0.83798 0.75753 0.74738 0.81380 0.73983 0.75999 0.82323 0.81647 0.84374 0.81667 0.88610 0.87681 3 0.78203 0.81454 -0.031892 6 0.74589 0.70799 0.037899 0.92605 0.11468 insignificant 1 1 insignificant 0.92861 0.319890 insignificant 1 1 insignificant -0.025964 0.473960 insignificant 1 insignificant 0.78216 0.77522 0.0066627 6 0.74486 0.73282 0.012041 7.2324e-01 0.7588595 insignificant 1.0000e+00 1.00000 insignificant 4.6589e-01 0.9283657 insignificant 1.0000e+00 1.00000 insignificant 0.044814 2.4144e-01 insignificant 1.0000000 insignificant 0.78314 0.84848 -0.0526443 6 0.79005 0.83457 -0.044519 9.9964e-01 0.01977604 weaklyHypometh 1.00000000 1.00000 insignificant 0.99987024 0.05135990 insignificant 1.00000 1.00000 insignificant -0.056844 0.0658040 insignificant 1 insignificant 0.81526 0.77522 0.039731 6 0.69749 0.73282 -0.035332 1.8145e-01 0.94051196 insignificant 1.0000e+00 1.00000 insignificant 2.8020e-01 0.9867376 insignificant 1.0000e+00 1 insignificant 0.070777 1.2111e-01 insignificant 1.00000000 insignificant 0.81581 0.84848 -0.020707 6 0.79713 0.83457 -0.037436 9.5282e-01 3.0634e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4530e-01 0.5144278 insignificant 1.000000 1.00000 insignificant -0.030881 0.4117004 insignificant 1 insignificant 0.77713 0.84848 -0.059908 6 0.78989 0.83457 -0.044676 0.99659 1.0320e-01 insignificant 1 1.0000e+00 insignificant 0.99982 1.3483e-01 insignificant 1 1.00000000 insignificant -0.101658 0.02334052 weaklyHypometh 1.00000 insignificant chr12 94996027 94997027 116941 LTA4H ENSG00000111144 0.79046 141 6 0.76455 204 6 0.89002 116 6 0.65634 173 6 0.96207 117 6 0.77836 222 6 0.75693 155 6 0.88793 144 6 0.85784 86 6 0.84167 81 5 0.78618 172 6 0.80102 28 2 0.87647 122 6 0.71085 50 3 0.72712 126 6 0.55144 68 4 0.91162 27 2 0.50884 232 7 0.87469 78 6 0.74986 152 6 0.92708 78 5 0.79167 64 5 0.63582 114 6 0.90625 36 3 0.85846 92 4 0.73907 225 6 0.69998 113 6 0.65625 30 3 0.87273 149 6 0.77842 241 6 0.92703 256 6 0.77813 158 6 0.38958 218 6 0.35661 144 6 0.18261 156 4 0.10884 24 2 0.10986 156 7 0.21373 291 6 0.81236 152 6 0.82941 179 6 0.77507 131 6 0.86944 67 6 0.49737 184 6 0.91699 0.84391 0.89612 0.87028 0.96181 0.90259 0.92652 0.88956 0.87537 0.95531 0.93641 0.76856 0.87045 0.84422 0.87223 0.56465 0.87411 0.74742 0.85631 0.91648 0.87523 0.88326 0.84058 0.97207 0.89749 0.85841 0.77072 0.89665 0.91138 0.91698 0.92292 0.91474 0.32382 0.46037 0.34344 0.18489 0.21541 0.20179 0.81989 0.79221 0.72870 0.83371 0.53336 3 0.85789 0.87596 -0.023606 6 0.66798 0.72472 -0.056739 0.99423 0.21438 insignificant 1 1 insignificant 0.97872 0.396292 insignificant 1 1 insignificant -0.013361 0.735736 insignificant 1 insignificant 0.85766 0.25177 0.5926467 6 0.66785 0.16463 0.503223 4.8053e-47 1.0000000 hypermethylated 4.8053e-44 1.00000 hypermethylated 1.0532e-12 1.0000000 hypermethylated 1.0532e-09 1.00000 hypermethylated 0.557340 8.8181e-06 hypermethylated 0.0017636 hypermethylated 0.85956 0.71809 0.1425203 6 0.75982 0.67761 0.082211 1.8002e-06 0.98455060 weaklyHypermeth 0.00090012 1.00000 weaklyHypermeth 0.00090166 0.99466661 weaklyHypermeth 0.45083 1.00000 insignificant 0.027481 0.7154292 insignificant 1 insignificant 0.87596 0.25202 0.620952 6 0.72472 0.18292 0.541801 3.5337e-39 1.00000000 hypermethylated 3.5337e-36 1.00000 hypermethylated 8.5804e-12 1.0000000 hypermethylated 8.5804e-09 1 hypermethylated 0.570701 4.8931e-06 hypermethylated 0.00097863 hypermethylated 0.87863 0.71730 0.168653 6 0.78893 0.63155 0.157381 6.6932e-08 1.0000e+00 weaklyHypermeth 6.6932e-05 1.000000 weaklyHypermeth 5.4402e-05 0.9988383 weaklyHypermeth 0.054402 1.00000 weaklyHypermeth 0.040842 0.5964272 insignificant 1 insignificant 0.25254 0.71809 -0.458014 6 0.20579 0.67761 -0.471818 0.99999 9.4750e-13 hypomethylated 1 9.4750e-10 hypomethylated 0.99999 4.1535e-07 hypomethylated 1 0.00041535 hypomethylated -0.529860 0.00024344 hypomethylated 0.06086 hypomethylated chr12 96380180 96381180 117099 ENSG00000211051 0.020450 438 5 0.104575 153 1 0.00000 16 1 0.023336 494 5 0.00000 15 1 0.037412 413 5 0.088235 34 1 0.000000 24 1 0.09091 11 1 0.00000 9 1 0.042857 70 1 0.00000 5 1 0.00000 10 1 0.000000 15 1 0.00000 18 1 0.052632 19 1 NA 0 0 0.016330 453 5 0.0064516 110 5 0.0058480 211 5 0.00000 16 1 0.00000 4 0 0.0074074 83 5 0.00000 26 1 0.00000 23 1 0.035397 239 5 0.076923 13 1 0.00000 15 1 0.018868 53 1 0.028642 243 5 0.017143 270 5 0.043073 389 5 0.0107527 93 1 0.000000 21 1 0.000000 218 5 0.024242 164 5 0.057471 87 1 0.192029 238 5 0.0022831 600 5 0.011499 448 5 0.0060439 653 5 0.013043 220 5 0.0085364 508 5 0.080972 0.104575 0.000000 0.054167 0.00000 0.069264 0.088235 0.000000 0.09091 0.00000 0.042857 0.000000 0.000000 0.000000 0.00000 0.052632 NA 0.024096 0.032258 0.035088 0.00000 0.000000 0.037037 0.00000 0.00000 0.058394 0.076923 0.00000 0.018868 0.043210 0.050000 0.072917 0.0107527 0.000000 0.000000 0.0000000 0.057471 0.000000 0.0000000 0.023585 0.0028169 0.065217 0.012146 1 0.040143 0.039301 0.0016008 5 0.024021 0.029710 -0.0056892 0.440293 0.1490901 insignificant 1 1.00000 insignificant 0.67156 0.47420834 insignificant 1 1.00000 insignificant 0.00678431 0.524256 lowCoverage 1 lowCoverage 0.040143 0.043902 0.00024116 5 0.024021 0.066426 -0.042405 1.0339e-01 0.2237527 insignificant 1.0000e+00 1 insignificant 7.2477e-01 0.3961536 insignificant 1.0000e+00 1.00000 insignificant -0.02167716 5.1509e-01 lowCoverage 1.0000e+00 lowCoverage 0.040111 0.011527 0.0279560 5 0.020018 0.0068383 0.01317942 1.7765e-02 0.99997866 weaklyHypermeth 6.3445e-01 1.00000 insignificant 5.7654e-01 0.98891307 insignificant 1.0000e+00 1.00000 insignificant 0.0174577 0.04588447 lowCoverage 1.00000 lowCoverage 0.039301 0.043902 0.0009321 5 0.029710 0.066426 -0.036715 1.1255e-01 0.44449 insignificant 1.0000e+00 1 insignificant 7.8089e-01 0.39857 insignificant 1.0000e+00 1 insignificant -0.028461 3.9672e-01 lowCoverage 1.0000e+00 lowCoverage 0.039301 0.011532 0.0269465 5 0.029710 0.0082059 0.0215045 1.1941e-03 0.43664985 weaklyHypermeth 5.4279e-02 1.00000 weaklyHypermeth 2.2014e-01 0.5928297 insignificant 1.0000e+00 1 insignificant 0.0106733 1.5958e-01 lowCoverage 1.000000 lowCoverage 0.043902 0.011532 0.032339 5 0.066426 0.0082059 0.058220 1.5035e-01 9.4803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7887e-01 6.8101e-01 insignificant 1.000000 1.0000e+00 insignificant 0.039135 2.5226e-01 lowCoverage 1.0000e+00 lowCoverage chr12 96380389 96381389 117100 ENSG00000211051 0.019554 637 6 0.077914 312 3 0.06250 34 2 0.028118 667 6 0.00000 35 3 0.040093 591 6 0.039216 71 2 0.020833 48 2 0.09091 23 2 0.00000 18 2 0.014286 149 3 0.10000 10 2 0.00000 21 2 0.066667 31 2 0.00000 36 2 0.052632 38 2 NA 0 0 0.021721 679 6 0.0046083 161 6 0.0067337 377 6 0.00000 34 2 0.00000 8 0 0.0137486 127 6 0.00000 56 2 0.00000 44 2 0.058328 358 7 0.038462 25 2 0.00000 29 2 0.012579 107 2 0.023520 393 7 0.017869 403 7 0.040690 528 6 0.0035842 185 2 0.000000 43 2 0.000000 243 6 0.024242 164 5 0.029258 165 3 0.148054 364 6 0.0022465 836 6 0.009172 603 7 0.0043170 930 6 0.014838 388 6 0.0077208 694 7 0.049368 0.084396 0.089923 0.053139 0.00000 0.062989 0.060024 0.019983 0.13451 0.00000 0.022303 0.095918 0.000000 0.095918 0.00000 0.052632 NA 0.035883 0.016787 0.024038 0.00000 0.000000 0.041074 0.00000 0.00000 0.034749 0.040031 0.00000 0.018868 0.032764 0.044902 0.051748 0.0055958 0.000000 0.000000 0.0060008 0.044442 0.015471 0.0020495 0.015493 0.0014659 0.045359 0.011771 2 0.040142 0.034091 0.0066444 6 0.026614 0.033122 -0.0065080 0.310364 0.2104058 insignificant 1 1.00000 insignificant 0.32382 0.66876614 insignificant 1 1.00000 insignificant 0.01688889 0.081795 lowCoverage 1 lowCoverage 0.040142 0.036113 0.00708640 6 0.026614 0.050084 -0.023470 3.2775e-02 0.4945143 weaklyHypermeth 5.2862e-01 1 insignificant 3.9972e-01 0.6808287 insignificant 1.0000e+00 1.00000 insignificant -0.00020121 9.9372e-01 lowCoverage 1.0000e+00 lowCoverage 0.040122 0.010432 0.0295498 6 0.023287 0.0061267 0.01716048 2.8374e-03 0.99999947 weaklyHypermeth 1.1350e-01 1.00000 insignificant 3.5234e-01 0.99840162 insignificant 1.0000e+00 1.00000 insignificant 0.0263297 0.00282042 lowCoverage 0.40292 lowCoverage 0.034091 0.036113 0.0029327 6 0.033122 0.050084 -0.016962 8.3467e-02 0.68598 insignificant 1.0000e+00 1 insignificant 7.3359e-01 0.60629 insignificant 1.0000e+00 1 insignificant -0.017090 5.0556e-01 lowCoverage 1.0000e+00 lowCoverage 0.034091 0.010435 0.0233881 6 0.033122 0.0070019 0.0261200 2.3483e-04 0.73105226 weaklyHypermeth 1.4677e-02 1.00000 weaklyHypermeth 2.7179e-01 0.7457187 insignificant 1.0000e+00 1 insignificant 0.0094408 1.4300e-01 lowCoverage 1.000000 lowCoverage 0.036113 0.010435 0.025729 6 0.050084 0.0070019 0.043082 1.8257e-01 9.9361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3317e-01 8.2913e-01 insignificant 1.000000 1.0000e+00 insignificant 0.026531 3.0849e-01 lowCoverage 1.0000e+00 lowCoverage chr12 96380945 96381945 117101 ENSG00000211051 0.019554 637 6 0.077914 312 3 0.06250 34 2 0.028118 667 6 0.00000 35 3 0.040093 591 6 0.039216 71 2 0.020833 48 2 0.09091 23 2 0.00000 18 2 0.014286 149 3 0.10000 10 2 0.00000 21 2 0.066667 31 2 0.00000 36 2 0.052632 38 2 NA 0 0 0.021721 679 6 0.0046083 161 6 0.0067337 377 6 0.00000 34 2 0.00000 8 0 0.0137486 127 6 0.00000 56 2 0.00000 44 2 0.058328 358 7 0.038462 25 2 0.00000 29 2 0.012579 107 2 0.023520 393 7 0.017869 403 7 0.040690 528 6 0.0035842 185 2 0.000000 43 2 0.000000 243 6 0.024242 164 5 0.029258 165 3 0.148054 364 6 0.0022465 836 6 0.009172 603 7 0.0043170 930 6 0.014838 388 6 0.0077208 694 7 0.049368 0.084396 0.089923 0.053139 0.00000 0.062989 0.060024 0.019983 0.13451 0.00000 0.022303 0.095918 0.000000 0.095918 0.00000 0.052632 NA 0.035883 0.016787 0.024038 0.00000 0.000000 0.041074 0.00000 0.00000 0.034749 0.040031 0.00000 0.018868 0.032764 0.044902 0.051748 0.0055958 0.000000 0.000000 0.0060008 0.044442 0.015471 0.0020495 0.015493 0.0014659 0.045359 0.011771 2 0.040142 0.034091 0.0066444 6 0.026614 0.033122 -0.0065080 0.310364 0.2104058 insignificant 1 1.00000 insignificant 0.32382 0.66876614 insignificant 1 1.00000 insignificant 0.01688889 0.081795 lowCoverage 1 lowCoverage 0.040142 0.036113 0.00708640 6 0.026614 0.050084 -0.023470 3.2775e-02 0.4945143 weaklyHypermeth 5.2862e-01 1 insignificant 3.9972e-01 0.6808287 insignificant 1.0000e+00 1.00000 insignificant -0.00020121 9.9372e-01 lowCoverage 1.0000e+00 lowCoverage 0.040122 0.010432 0.0295498 6 0.023287 0.0061267 0.01716048 2.8374e-03 0.99999947 weaklyHypermeth 1.1350e-01 1.00000 insignificant 3.5234e-01 0.99840162 insignificant 1.0000e+00 1.00000 insignificant 0.0263297 0.00282042 lowCoverage 0.40292 lowCoverage 0.034091 0.036113 0.0029327 6 0.033122 0.050084 -0.016962 8.3467e-02 0.68598 insignificant 1.0000e+00 1 insignificant 7.3359e-01 0.60629 insignificant 1.0000e+00 1 insignificant -0.017090 5.0556e-01 lowCoverage 1.0000e+00 lowCoverage 0.034091 0.010435 0.0233881 6 0.033122 0.0070019 0.0261200 2.3483e-04 0.73105226 weaklyHypermeth 1.4677e-02 1.00000 weaklyHypermeth 2.7179e-01 0.7457187 insignificant 1.0000e+00 1 insignificant 0.0094408 1.4300e-01 lowCoverage 1.000000 lowCoverage 0.036113 0.010435 0.025729 6 0.050084 0.0070019 0.043082 1.8257e-01 9.9361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3317e-01 8.2913e-01 insignificant 1.000000 1.0000e+00 insignificant 0.026531 3.0849e-01 lowCoverage 1.0000e+00 lowCoverage chr12 96381091 96382091 117102 ENSG00000211051 0.019554 637 6 0.077914 312 3 0.06250 34 2 0.028118 667 6 0.00000 35 3 0.046775 590 6 0.039216 71 2 0.020833 48 2 0.09091 23 2 0.00000 18 2 0.014286 149 3 0.10000 10 2 0.00000 21 2 0.066667 31 2 0.00000 36 2 0.052632 38 2 NA 0 0 0.021721 679 6 0.0046083 161 6 0.0078560 376 6 0.00000 34 2 0.00000 8 0 0.0137486 127 6 0.00000 56 2 0.00000 44 2 0.058328 358 7 0.038462 25 2 0.00000 29 2 0.012579 107 2 0.023520 393 7 0.017869 403 7 0.040690 528 6 0.0035842 185 2 0.000000 43 2 0.000000 243 6 0.024242 164 5 0.029258 165 3 0.169205 363 6 0.0025674 835 6 0.009172 603 7 0.0043170 930 6 0.014838 388 6 0.0077208 694 7 0.049368 0.084396 0.089923 0.053139 0.00000 0.062989 0.060024 0.019983 0.13451 0.00000 0.022303 0.095918 0.000000 0.095918 0.00000 0.052632 NA 0.035883 0.016787 0.024038 0.00000 0.000000 0.041074 0.00000 0.00000 0.034749 0.040031 0.00000 0.018868 0.032764 0.044902 0.051748 0.0055958 0.000000 0.000000 0.0060008 0.044442 0.015471 0.0020495 0.015493 0.0014659 0.045359 0.011771 2 0.040142 0.034091 0.0066444 6 0.026614 0.033122 -0.0065080 0.310364 0.2104058 insignificant 1 1.00000 insignificant 0.32382 0.66876614 insignificant 1 1.00000 insignificant 0.01729965 0.075293 lowCoverage 1 lowCoverage 0.040142 0.036113 0.00708640 6 0.026614 0.050084 -0.023470 3.2775e-02 0.4945143 weaklyHypermeth 5.2862e-01 1 insignificant 3.9972e-01 0.6808287 insignificant 1.0000e+00 1.00000 insignificant -0.00331554 9.0917e-01 lowCoverage 1.0000e+00 lowCoverage 0.040142 0.010435 0.0295649 6 0.026614 0.0070019 0.01961198 1.0217e-03 0.99999354 weaklyHypermeth 5.1083e-02 1.00000 weaklyHypermeth 2.2920e-01 0.99376559 insignificant 1.0000e+00 1.00000 insignificant 0.0266763 0.00255476 lowCoverage 0.40292 lowCoverage 0.034091 0.036113 0.0029327 6 0.033122 0.050084 -0.016962 8.3467e-02 0.68598 insignificant 1.0000e+00 1 insignificant 7.3359e-01 0.60629 insignificant 1.0000e+00 1 insignificant -0.020615 4.8297e-01 lowCoverage 1.0000e+00 lowCoverage 0.034091 0.010435 0.0233881 6 0.033122 0.0070019 0.0261200 2.3483e-04 0.73105226 weaklyHypermeth 1.4677e-02 1.00000 weaklyHypermeth 2.7179e-01 0.7457187 insignificant 1.0000e+00 1 insignificant 0.0093767 1.4479e-01 lowCoverage 1.000000 lowCoverage 0.036113 0.010435 0.025729 6 0.050084 0.0070019 0.043082 1.8257e-01 9.9361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3317e-01 8.2913e-01 insignificant 1.000000 1.0000e+00 insignificant 0.029992 3.1478e-01 lowCoverage 1.0000e+00 lowCoverage chr12 98049513 98050513 117355 ANKS1B ENSG00000185046 0.309172 167 5 0.281032 112 5 0.34551 140 5 0.472897 174 5 0.49167 27 4 0.398742 239 6 0.244049 98 5 0.398506 89 5 0.33504 70 4 0.37076 90 5 0.422706 136 6 0.40057 56 4 0.31660 114 6 NA 0 0 0.24295 102 5 0.533333 23 3 0.34382 128 5 0.371201 178 5 0.1428571 60 5 0.3462146 251 6 0.42694 84 5 0.33247 154 5 0.5207722 152 5 0.37798 33 4 0.42822 85 5 0.352946 162 6 0.340755 119 6 0.29444 38 4 0.357585 62 5 0.389765 155 5 0.338563 143 6 0.399861 318 6 0.1823541 139 6 0.000000 40 5 0.326389 150 6 0.296296 57 5 0.333333 48 5 0.308144 131 5 0.3744648 315 5 0.400514 248 5 0.3516170 222 5 0.336235 210 4 0.3493902 284 5 0.211873 0.177930 0.167289 0.246858 0.30640 0.212425 0.146469 0.217736 0.19468 0.14056 0.220871 0.136562 0.053019 NA 0.11424 0.426292 0.13374 0.142897 0.034884 0.111085 0.35238 0.089308 0.346563 0.10413 0.17143 0.106114 0.100379 0.15213 0.146799 0.146348 0.137364 0.230718 0.0381064 0.000000 0.039002 0.0510336 0.040698 0.068347 0.1153462 0.156742 0.1119633 0.198866 0.184269 4 0.244454 0.265116 -0.0167107 5 0.377209 0.389160 -0.0119512 0.885995 0.2013016 insignificant 1 1.00000 insignificant 0.66191 0.31581762 insignificant 1 1.00000 insignificant -0.02383469 0.390596 lowCoverage 1 lowCoverage 0.244454 0.182301 0.11708283 5 0.377209 0.269008 0.108201 2.2591e-07 0.9999849 weaklyHypermeth 7.0598e-06 1 weaklyHypermeth 1.7282e-06 0.9988190 weaklyHypermeth 1.5711e-04 1.00000 weaklyHypermeth 0.11510440 8.6452e-02 lowCoverage 1.0000e+00 lowCoverage 0.244454 0.204848 0.0058405 5 0.377209 0.3776962 -0.00048728 1.3927e-01 0.18496782 insignificant 1.0000e+00 1.00000 insignificant 1.5165e-01 0.16481907 insignificant 1.0000e+00 1.00000 insignificant -0.0062538 0.79780146 lowCoverage 1.00000 lowCoverage 0.265116 0.182301 0.1354011 5 0.389160 0.269008 0.120153 1.4279e-06 0.99992 weaklyHypermeth 4.4623e-05 1 weaklyHypermeth 4.4217e-06 0.99970 weaklyHypermeth 3.4013e-04 1 weaklyHypermeth 0.138939 4.7023e-02 weaklyHypermeth 1.0000e+00 insignificant 0.265116 0.204848 0.0214069 5 0.389160 0.3776962 0.0114640 2.8148e-01 0.47429229 insignificant 1.0000e+00 1.00000 insignificant 6.7199e-01 0.3662367 insignificant 1.0000e+00 1 insignificant 0.0175809 4.0630e-01 lowCoverage 1.000000 lowCoverage 0.182301 0.204848 -0.122918 5 0.269008 0.3776962 -0.108689 9.9972e-01 1.0089e-06 weaklyHypometh 1.0000e+00 7.2063e-05 weaklyHypometh 9.9927e-01 5.5517e-05 weaklyHypometh 1.000000 6.9396e-03 weaklyHypometh -0.121358 7.1636e-02 lowCoverage 1.0000e+00 lowCoverage chr12 98186792 98187792 117365 ANKS1B ENSG00000185046 0.783637 323 8 0.790653 177 9 0.71679 180 9 0.846555 166 8 0.85519 90 8 0.835140 306 8 0.802330 110 9 0.704958 118 6 0.68782 79 8 0.82743 123 9 0.818509 265 9 0.66500 73 7 0.86612 185 9 1.000000 11 1 0.87061 126 9 0.894406 75 6 0.71207 71 7 0.743763 201 8 0.8693438 152 8 0.8421557 317 9 0.55972 50 6 0.91861 96 8 0.7235333 174 8 0.77256 76 5 0.80464 80 8 0.857195 187 8 0.875868 81 6 0.82944 65 6 0.869269 110 8 0.796941 182 8 0.883249 187 8 0.813186 414 9 0.8369462 134 8 0.790533 126 7 0.758902 198 9 0.789606 76 6 0.790408 123 9 0.701618 180 9 0.8438992 303 8 0.906326 309 8 0.7835128 250 8 0.778376 247 6 0.8154433 262 8 0.833165 0.768479 0.790345 0.843490 0.83591 0.828599 0.742048 0.779594 0.65431 0.81374 0.796629 0.739048 0.867527 0.867442 0.82899 0.870373 0.79009 0.781363 0.877704 0.866290 0.77431 0.899136 0.841752 0.84677 0.83898 0.830234 0.817668 0.91500 0.856265 0.756150 0.839263 0.839317 0.7380577 0.850723 0.753307 0.8576026 0.826619 0.724556 0.8734503 0.887604 0.8325893 0.810179 0.872433 5 0.810356 0.826675 -0.0172121 8 0.823617 0.829470 -0.0058533 0.936954 0.1664391 insignificant 1 1.00000 insignificant 0.94293 0.09595949 insignificant 1 1.00000 insignificant -0.00206082 0.950900 insignificant 1 insignificant 0.810356 0.763441 0.04832050 9 0.823617 0.784925 0.038692 1.1976e-02 0.9881704 weaklyHypermeth 2.1774e-01 1 insignificant 2.4503e-01 0.9113980 insignificant 1.0000e+00 1.00000 insignificant 0.02862169 2.8808e-01 insignificant 1.0000e+00 insignificant 0.810356 0.843180 -0.0349060 8 0.823617 0.8451071 -0.02149022 7.8247e-01 0.01991844 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.8222e-01 0.01314848 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0188877 0.54095641 insignificant 1.00000 insignificant 0.826675 0.763441 0.0590378 8 0.829470 0.784925 0.044545 1.3846e-03 0.97815 weaklyHypermeth 2.8847e-02 1 weaklyHypermeth 5.9275e-02 0.96554 insignificant 1.0000e+00 1 insignificant 0.030683 3.6647e-01 insignificant 1.0000e+00 insignificant 0.826675 0.843180 -0.0202431 8 0.829470 0.8451071 -0.0156369 9.4845e-01 0.24983218 insignificant 1.0000e+00 1.00000 insignificant 8.7895e-01 0.4947735 insignificant 1.0000e+00 1 insignificant -0.0168269 6.4827e-01 insignificant 1.000000 insignificant 0.763441 0.843180 -0.071143 8 0.784925 0.8451071 -0.060182 9.1653e-01 9.9846e-04 weaklyHypometh 1.0000e+00 3.3282e-02 weaklyHypometh 8.5387e-01 2.2273e-02 weaklyHypometh 1.000000 6.5509e-01 insignificant -0.047509 1.4890e-01 insignificant 1.0000e+00 insignificant chr12 99070932 99071932 117402 UHRF1BP1L ENSG00000111647 0.611111 29 4 0.789209 104 6 0.69418 77 4 0.833333 29 2 0.76907 81 4 0.759824 108 5 0.801820 110 4 0.721230 62 6 0.79868 87 6 0.87798 71 5 0.711400 125 6 0.82054 71 4 0.78019 120 6 NA 0 0 0.88498 83 6 0.746648 80 3 0.78635 103 4 0.877778 24 2 0.7801012 121 6 0.7523259 138 6 0.86550 74 6 0.57115 39 2 0.7913462 83 6 0.81944 52 3 0.70833 13 1 0.779142 97 6 0.833235 81 6 0.84577 48 5 0.696296 69 5 0.783113 83 6 0.789209 94 6 0.861275 126 6 0.7917934 99 6 0.610942 95 6 0.718713 137 4 0.700000 6 0 0.802658 73 6 0.815958 88 6 0.7938596 36 2 0.881863 46 2 0.9062500 14 1 0.900000 18 2 0.8888889 19 2 0.869565 0.689243 0.744031 0.788388 0.54855 0.792830 0.743925 0.751121 0.72661 0.85757 0.616193 0.579622 0.690288 NA 0.88439 0.889847 0.69875 0.873430 0.777222 0.848560 0.85100 0.676189 0.864353 0.83889 0.69338 0.735380 0.817837 0.79328 0.786795 0.770413 0.807238 0.902758 0.7498771 0.645914 0.375480 0.4232986 0.717186 0.763890 0.7138158 0.843947 0.8586957 0.817391 0.797101 1 0.820086 0.819558 -0.0297185 6 0.785470 0.803762 -0.0182927 0.930439 0.1486821 insignificant 1 1.00000 insignificant 0.75404 0.25844382 insignificant 1 1.00000 insignificant 0.00012503 0.996592 lowCoverage 1 lowCoverage 0.820086 0.734940 0.07813232 6 0.785470 0.726971 0.058499 7.7277e-03 0.9692104 weaklyHypermeth 1.5152e-01 1 insignificant 1.5016e-01 0.7832254 insignificant 1.0000e+00 1.00000 insignificant 0.03876517 3.1162e-01 lowCoverage 1.0000e+00 lowCoverage 0.820086 0.804511 -0.0436916 2 0.785470 0.8811304 -0.09566073 8.6055e-01 0.00002801 lowCoverage 1.0000e+00 0.02801 lowCoverage 9.3740e-01 0.00015719 lowCoverage 1.0000e+00 0.11987 lowCoverage -0.0953965 0.00466631 lowCoverage 0.45571 lowCoverage 0.819558 0.734940 0.1028775 6 0.803762 0.726971 0.076792 9.4903e-04 0.78765 weaklyHypermeth 2.0192e-02 1 weaklyHypermeth 1.1140e-02 0.58701 weaklyHypermeth 2.5319e-01 1 insignificant 0.038640 3.5974e-01 lowCoverage 1.0000e+00 lowCoverage 0.819558 0.804511 -0.0057377 2 0.803762 0.8811304 -0.0773680 8.6268e-01 0.00029308 lowCoverage 1.0000e+00 0.29308 lowCoverage 9.8100e-01 0.0021752 lowCoverage 1.0000e+00 1 lowCoverage -0.0955215 9.9586e-03 lowCoverage 0.829886 lowCoverage 0.734940 0.804511 -0.142978 2 0.726971 0.8811304 -0.154160 9.9618e-01 1.8855e-04 lowCoverage 1.0000e+00 6.5018e-03 lowCoverage 9.9994e-01 3.7580e-04 lowCoverage 1.000000 3.4164e-02 lowCoverage -0.134162 7.6110e-03 lowCoverage 3.4595e-01 lowCoverage chr12 100445228 100446228 117433 SPIC ENSG00000166211 0.801684 210 5 0.720366 154 5 0.47269 32 4 0.757963 124 4 0.77500 23 2 0.858771 281 5 0.755556 24 2 0.817416 103 4 0.58000 26 4 0.62500 16 1 0.761439 210 5 0.33333 3 0 0.92890 72 4 0.919048 37 4 0.94444 31 4 NA 0 0 NA 0 0 0.649205 289 4 0.9127891 166 4 0.7764111 275 5 0.93776 49 4 0.87500 6 0 0.7174603 57 4 0.85455 30 2 1.00000 11 1 0.933890 220 5 0.719839 119 4 0.11111 5 0 0.880612 165 4 0.942369 259 5 0.899174 262 5 0.854456 212 5 0.2499073 214 5 0.461425 170 4 0.750000 163 4 1.000000 4 0 0.373643 123 4 0.343961 279 5 0.8231378 71 5 0.868859 224 5 0.8497984 122 5 0.591477 63 4 0.6809890 154 4 0.821095 0.779495 0.581838 0.879630 0.72593 0.867331 0.695473 0.852094 0.74074 0.68519 0.814726 0.527665 0.908426 0.899471 0.95885 NA NA 0.814150 0.924243 0.882047 0.93525 0.888889 0.900059 0.96633 1.00000 0.921347 0.717738 0.32421 0.888859 0.923515 0.905789 0.885064 0.2624189 0.521028 0.777778 0.6793901 0.485142 0.717735 0.8471735 0.888603 0.8824920 0.552609 0.780667 0 0.836705 0.885222 -0.0469432 4 0.790003 0.867039 -0.0770360 0.998270 0.0038687 lowCoverage 1 0.38687 lowCoverage 0.99848 0.00673100 lowCoverage 1 1.00000 lowCoverage -0.06662833 0.405103 lowCoverage 1 lowCoverage 0.836705 0.561644 0.28289145 4 0.790003 0.483996 0.306007 7.7563e-11 1.0000000 lowCoverage 2.8727e-09 1 lowCoverage 3.2693e-03 0.9996370 lowCoverage 8.8360e-02 1.00000 lowCoverage 0.21406715 1.3219e-01 lowCoverage 1.0000e+00 lowCoverage 0.836705 0.813880 0.0199845 4 0.790003 0.7961713 -0.00616848 3.5415e-01 0.24047045 lowCoverage 1.0000e+00 1.00000 lowCoverage 4.4169e-01 0.26036433 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0189625 0.78176038 lowCoverage 1.00000 lowCoverage 0.885305 0.561053 0.3252914 4 0.889199 0.403330 0.485869 1.9955e-09 1.00000 lowCoverage 1.0503e-07 1 lowCoverage 1.2495e-03 1.00000 lowCoverage 3.6751e-02 1 lowCoverage 0.280695 6.9918e-02 lowCoverage 1.0000e+00 lowCoverage 0.885222 0.813880 0.0719220 5 0.867039 0.7961713 0.0708675 8.0914e-02 0.87819681 insignificant 1.0000e+00 1.00000 insignificant 2.5090e-02 0.9851549 weaklyHypermeth 1.0000e+00 1 insignificant 0.0476659 5.9216e-01 lowCoverage 1.000000 lowCoverage 0.561644 0.813880 -0.265098 4 0.483996 0.7961713 -0.312176 9.9998e-01 8.1500e-05 lowCoverage 1.0000e+00 3.2600e-03 lowCoverage 9.9881e-01 7.3577e-03 lowCoverage 1.000000 2.8299e-01 lowCoverage -0.233030 1.1404e-01 lowCoverage 1.0000e+00 lowCoverage chr12 108601694 108602694 117812 ENSG00000200794 0.623301 316 6 0.541822 373 6 0.49884 235 6 0.552438 292 6 0.62423 87 5 0.646362 393 6 0.543962 204 6 0.746978 213 6 0.58717 173 6 0.58966 122 6 0.573351 311 6 0.56048 99 6 0.54861 192 6 0.677282 86 3 0.64567 193 6 0.558396 69 6 0.76333 48 4 0.564215 337 6 0.7180737 276 6 0.3376775 365 6 0.67372 129 6 0.46011 150 6 0.6343867 261 6 0.72919 96 6 0.58876 80 6 0.622309 444 6 0.585380 120 6 0.64018 113 6 0.500743 290 6 0.607388 526 6 0.668933 442 6 0.794053 396 6 0.6075672 234 6 0.340095 118 6 0.405303 30 1 0.654329 36 3 0.392125 266 6 0.547428 380 6 0.4907640 442 6 0.617093 291 6 0.4968085 302 6 0.594903 296 6 0.4689728 341 6 0.600499 0.508051 0.453216 0.525009 0.57881 0.637122 0.505434 0.698751 0.54426 0.54840 0.530921 0.516949 0.494839 0.560533 0.60848 0.549677 0.70743 0.518791 0.692935 0.363263 0.62096 0.412787 0.611557 0.69657 0.52238 0.516099 0.541930 0.55982 0.460751 0.570735 0.577625 0.732175 0.5722332 0.303223 0.359932 0.6170073 0.330156 0.465183 0.4441341 0.576406 0.4398304 0.556309 0.423927 6 0.544252 0.569413 -0.0281992 6 0.569512 0.669412 -0.0999003 0.984422 0.0427669 weaklyHypometh 1 1.00000 insignificant 0.95290 0.16443195 insignificant 1 1.00000 insignificant -0.03033764 0.374879 insignificant 1 insignificant 0.544252 0.462406 0.08778681 6 0.569512 0.519395 0.050117 5.9619e-05 0.3433766 weaklyHypermeth 1.3594e-03 1 weaklyHypermeth 1.1670e-02 0.9384761 weaklyHypermeth 2.7785e-01 1.00000 insignificant 0.10395123 1.1177e-01 lowCoverage 1.0000e+00 lowCoverage 0.544272 0.499402 0.0640855 6 0.581097 0.5270128 0.05408436 1.9799e-02 0.94583772 weaklyHypermeth 6.8271e-01 1.00000 insignificant 1.6099e-02 0.97365511 weaklyHypermeth 8.6561e-01 1.00000 insignificant 0.0613842 0.13119549 insignificant 1.00000 insignificant 0.569413 0.462406 0.1103587 6 0.669412 0.519395 0.150017 8.1882e-05 0.83059 weaklyHypermeth 2.2130e-03 1 weaklyHypermeth 6.3273e-04 0.97262 weaklyHypermeth 2.2598e-02 1 weaklyHypermeth 0.134289 5.3717e-02 lowCoverage 1.0000e+00 lowCoverage 0.568847 0.499402 0.0952653 6 0.614314 0.5270128 0.0873014 9.1695e-04 0.99964094 weaklyHypermeth 4.8260e-02 1.00000 weaklyHypermeth 5.6815e-03 0.9982138 weaklyHypermeth 4.3704e-01 1 insignificant 0.0917218 4.3546e-02 weaklyHypermeth 1.000000 insignificant 0.461828 0.499402 -0.021978 6 0.494850 0.5270128 -0.032163 4.9009e-01 1.0330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7165e-01 1.2392e-01 insignificant 1.000000 1.0000e+00 insignificant -0.042567 5.0352e-01 lowCoverage 1.0000e+00 lowCoverage chr12 108645578 108646578 117820 ENSG00000200794 0.826286 365 7 0.858036 325 7 0.69064 235 7 0.921592 294 7 0.78563 230 6 0.781691 431 7 0.886004 235 6 0.825781 242 7 0.69470 225 7 0.84337 205 5 0.753593 325 7 0.77023 115 6 0.84193 234 7 0.758972 198 7 0.64115 298 7 0.728831 63 3 0.41667 16 2 0.845787 394 7 0.8077962 442 6 0.8148615 344 7 0.70184 157 7 0.61730 132 6 0.7137802 251 7 0.61057 123 7 0.77194 104 4 0.884622 380 6 0.665717 218 6 0.60905 196 6 0.773384 346 7 0.796159 388 7 0.685755 457 7 0.863962 328 7 0.2176478 307 7 0.062200 308 6 0.494340 135 4 0.234776 38 3 0.223929 331 8 0.317180 506 7 0.7109052 332 6 0.787067 277 6 0.7164335 318 6 0.883479 284 6 0.4915080 266 6 0.848747 0.786680 0.790534 0.903894 0.84646 0.918473 0.867210 0.893383 0.84311 0.88585 0.816475 0.854711 0.898404 0.929990 0.86003 0.851592 NA 0.815931 0.913156 0.890716 0.85338 0.814385 0.900321 0.93969 0.83848 0.842925 0.717931 0.90270 0.862502 0.889407 0.849206 0.886887 0.1350378 0.071098 0.423095 0.2665992 0.177921 0.312204 0.7864303 0.817668 0.7764768 0.841454 0.589618 5 0.870974 0.862898 0.0030857 7 0.728510 0.602877 0.1256327 0.030906 0.7621158 weaklyHypermeth 1 1.00000 insignificant 0.12461 0.69156701 insignificant 1 1.00000 insignificant 0.05016978 0.181954 insignificant 1 insignificant 0.870974 0.219077 0.64472453 7 0.728510 0.192829 0.535681 4.4481e-63 1.0000000 hypermethylated 2.2241e-60 1 hypermethylated 2.7107e-13 1.0000000 hypermethylated 1.3553e-10 1.00000 hypermethylated 0.51633153 8.6525e-05 hypermethylated 5.4078e-03 hypermethylated 0.871519 0.802168 0.0828459 6 0.771353 0.6229745 0.14837884 2.5535e-06 0.98924769 weaklyHypermeth 2.9257e-04 1.00000 weaklyHypermeth 1.4392e-03 0.99283626 weaklyHypermeth 1.1071e-01 1.00000 insignificant 0.0567982 0.44689625 insignificant 1.00000 insignificant 0.862898 0.219077 0.6448140 7 0.602877 0.192829 0.410048 5.7788e-42 0.98852 hypermethylated 1.9263e-39 1 hypermethylated 4.7343e-11 0.99997 hypermethylated 1.5781e-08 1 hypermethylated 0.466162 1.3688e-04 hypermethylated 9.7773e-03 hypermethylated 0.865905 0.802168 0.0809404 6 0.681294 0.6229745 0.0583198 6.4680e-05 0.94973360 weaklyHypermeth 5.3900e-03 1.00000 weaklyHypermeth 3.7913e-03 0.9694925 weaklyHypermeth 3.1594e-01 1 insignificant 0.0066284 9.2806e-01 insignificant 1.000000 insignificant 0.218789 0.802168 -0.559181 6 0.191235 0.6229745 -0.431739 1.0000e+00 1.2692e-13 hypomethylated 1.0000e+00 2.1153e-11 hypomethylated 1.0000e+00 6.9579e-06 hypomethylated 1.000000 1.1597e-03 hypomethylated -0.459533 5.8373e-04 hypomethylated 4.8644e-02 hypomethylated chr12 108736643 108737643 117826 ENSG00000211357 0.868004 287 10 0.769536 127 10 0.76450 136 10 0.917626 333 10 0.88617 114 9 0.859573 301 10 0.836049 119 10 0.872872 174 10 0.83808 306 10 0.83267 212 10 0.842181 203 10 0.72371 95 10 0.89609 316 10 0.850769 188 10 0.80765 161 10 0.871471 148 9 0.76417 71 8 0.854928 375 10 0.8615801 111 10 0.8167491 244 10 0.83988 85 4 0.72068 166 10 0.7754085 234 10 0.75223 96 9 0.85693 184 10 0.841148 189 10 0.838283 224 10 0.84863 122 10 0.919560 193 8 0.881299 158 10 0.873907 134 10 0.800744 208 10 0.7229135 181 10 0.579437 110 8 0.931973 171 7 0.874837 78 8 0.736067 162 10 0.867948 168 10 0.8333417 290 10 0.911664 287 10 0.7114114 259 10 0.886476 292 10 0.8885787 255 10 0.874035 0.842888 0.831171 0.914700 0.88446 0.840896 0.834017 0.855580 0.85355 0.91410 0.842408 0.795969 0.891510 0.843992 0.83253 0.876618 0.74482 0.864916 0.865188 0.898472 0.84819 0.727441 0.849740 0.77366 0.85522 0.842069 0.830063 0.83674 0.920337 0.869536 0.855639 0.886376 0.7701705 0.627602 0.858374 0.8818905 0.805788 0.868823 0.8456778 0.902495 0.7872357 0.887508 0.888342 10 0.860482 0.845961 0.0050524 10 0.821055 0.833349 -0.0122939 0.360147 0.7016080 insignificant 1 1.00000 insignificant 0.34500 0.57792840 insignificant 1 1.00000 insignificant 0.00766021 0.703465 insignificant 1 insignificant 0.860482 0.786207 0.06132539 10 0.821055 0.743981 0.077073 1.9379e-02 0.3408121 weaklyHypermeth 3.3999e-01 1 insignificant 1.9027e-01 0.1119416 insignificant 1.0000e+00 1.00000 insignificant 0.05118939 3.8650e-01 insignificant 1.0000e+00 insignificant 0.860482 0.869125 -0.0024113 10 0.821055 0.8388058 -0.01775105 7.1715e-01 0.35542887 insignificant 1.0000e+00 1.00000 insignificant 6.2524e-01 0.51244675 insignificant 1.0000e+00 1.00000 insignificant -0.0095757 0.81028327 insignificant 1.00000 insignificant 0.845961 0.786207 0.0558427 10 0.833349 0.743981 0.089367 7.5494e-03 0.44783 weaklyHypermeth 1.3726e-01 1 insignificant 1.5318e-01 0.10621 insignificant 1.0000e+00 1 insignificant 0.043529 4.6459e-01 insignificant 1.0000e+00 insignificant 0.845961 0.869125 -0.0065467 10 0.833349 0.8388058 -0.0054572 6.1110e-01 0.21822998 insignificant 1.0000e+00 1.00000 insignificant 5.5878e-01 0.1868404 insignificant 1.0000e+00 1 insignificant -0.0172360 6.7969e-01 insignificant 1.000000 insignificant 0.786207 0.869125 -0.062147 10 0.743981 0.8388058 -0.094824 5.8528e-01 1.1432e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7953e-01 3.2032e-01 insignificant 1.000000 1.0000e+00 insignificant -0.060765 3.7109e-01 insignificant 1.0000e+00 insignificant chr12 110077805 110078805 117879 CUX2 ENSG00000111249 0.912186 246 6 0.910791 107 6 0.89912 116 6 0.922588 313 6 0.91111 39 3 0.853754 182 6 0.706349 30 3 0.884377 109 6 0.69192 65 6 0.91325 71 6 0.949788 173 6 0.71296 33 3 0.90865 105 6 NA 0 0 0.96875 78 6 1.000000 6 0 0.73333 27 3 0.859131 326 6 0.8944444 55 6 0.9587308 170 6 0.90991 73 6 0.83813 101 6 0.9224034 111 6 0.88889 33 5 0.89177 71 6 0.863492 174 6 0.985507 64 3 0.66667 24 3 0.944444 94 6 0.936339 159 6 0.895927 204 6 0.887311 269 6 0.6762324 112 6 0.680133 84 6 0.645531 137 6 0.642965 72 6 0.698214 38 6 0.631494 206 6 0.9237234 141 6 0.927512 222 6 0.9086346 223 6 0.947345 191 6 0.9606765 260 6 0.908432 0.917101 0.903112 0.924942 0.90932 0.853758 0.720743 0.887819 0.70015 0.91556 0.948753 0.730697 0.905724 NA 0.96663 0.929294 0.73136 0.857984 0.896516 0.961219 0.91952 0.841285 0.917496 0.88559 0.89633 0.853672 0.984525 0.63559 0.946681 0.934020 0.889871 0.888895 0.6779193 0.681470 0.624324 0.6533557 0.689255 0.632305 0.9218849 0.927780 0.9054448 0.944962 0.959113 0 0.892492 0.914306 -0.0196125 6 0.891595 0.912849 -0.0212545 0.863653 0.0921157 insignificant 1 1.00000 insignificant 0.92096 0.10928973 insignificant 1 1.00000 insignificant -0.01267641 0.688315 lowCoverage 1 lowCoverage 0.892492 0.665639 0.23210005 6 0.891595 0.663112 0.228483 1.0751e-13 0.9998004 hypermethylated 6.4533e-12 1 hypermethylated 8.9196e-06 0.9997401 hypermethylated 5.5747e-04 1.00000 hypermethylated 0.21079436 7.6050e-09 lowCoverage 1.0864e-06 lowCoverage 0.892492 0.924783 -0.0385598 6 0.891595 0.9353510 -0.04375631 9.4259e-01 0.01892189 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.9851e-01 0.01088107 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0603556 0.01644658 lowCoverage 1.00000 lowCoverage 0.914306 0.665639 0.2469433 6 0.912849 0.663112 0.249737 2.7220e-11 1.00000 hypermethylated 2.0938e-09 1 hypermethylated 3.8789e-06 1.00000 hypermethylated 3.2324e-04 1 hypermethylated 0.223471 2.6614e-07 hypermethylated 4.4356e-05 hypermethylated 0.914306 0.924783 -0.0223872 6 0.912849 0.9353510 -0.0225018 9.2362e-01 0.17204407 insignificant 1.0000e+00 1.00000 insignificant 7.3115e-01 0.2832484 insignificant 1.0000e+00 1 insignificant -0.0476791 7.3273e-02 insignificant 1.000000 insignificant 0.665639 0.924783 -0.269625 6 0.663112 0.9353510 -0.272239 1.0000e+00 8.7480e-08 hypomethylated 1.0000e+00 8.7480e-06 hypomethylated 9.9993e-01 5.9752e-06 hypomethylated 1.000000 1.1597e-03 hypomethylated -0.271150 1.2712e-08 hypomethylated 1.2712e-05 hypomethylated chr12 110331664 110332664 117895 SH2B3 ENSG00000111252 0.766736 406 12 0.594134 344 15 0.60479 487 15 0.895366 339 11 0.70968 233 13 0.851688 600 15 0.758874 388 15 0.685051 370 15 0.69951 402 14 0.72846 310 14 0.747258 540 15 0.70741 209 12 0.58823 455 15 0.802882 183 10 0.68892 381 15 0.678023 136 9 0.50916 145 8 0.433337 442 12 0.3573479 501 12 0.7653227 472 12 0.82559 242 12 0.49250 250 11 0.8858406 355 13 0.81889 254 14 0.63860 158 12 0.730303 445 15 0.662779 380 15 0.77462 259 14 0.673103 333 12 0.718545 453 15 0.674966 338 12 0.774254 566 15 0.0485225 453 15 0.028124 336 12 0.056397 370 7 0.031818 192 11 0.313355 359 15 0.011555 635 15 0.6563478 347 12 0.653500 488 12 0.7338883 344 12 0.565406 346 12 0.7271609 377 12 0.772387 0.625835 0.597795 0.890294 0.71558 0.853566 0.747905 0.706481 0.74539 0.75762 0.770395 0.738638 0.591470 0.711008 0.73331 0.770788 0.59601 0.468061 0.536690 0.814202 0.88404 0.625173 0.881903 0.84326 0.63949 0.736656 0.688363 0.77203 0.739480 0.768015 0.692376 0.811539 0.0514565 0.026134 0.056097 0.0346087 0.280819 0.017127 0.6957776 0.680974 0.7350550 0.654743 0.779397 9 0.706251 0.758492 -0.0526267 15 0.682923 0.732763 -0.0498400 0.999625 0.0013289 weaklyHypometh 1 0.21328 insignificant 0.99482 0.00514845 weaklyHypometh 1 1.00000 insignificant -0.04389001 0.309441 insignificant 1 insignificant 0.706251 0.082729 0.61829272 12 0.682923 0.095179 0.587744 8.4962e-90 1.0000000 hypermethylated 8.4962e-87 1 hypermethylated 7.1003e-34 1.0000000 hypermethylated 7.1003e-31 1.00000 hypermethylated 0.59698071 1.2880e-06 hypermethylated 1.1709e-04 hypermethylated 0.706251 0.690852 0.0069688 12 0.682923 0.6748276 0.00809547 1.7883e-01 0.02260646 inconclusive 1.0000e+00 1.00000 insignificant 2.3798e-01 0.01070185 inconclusive 1.0000e+00 1.00000 insignificant 0.0113486 0.79453879 insignificant 1.00000 insignificant 0.758492 0.082729 0.6700223 12 0.732763 0.095179 0.637584 4.4103e-82 1.00000 hypermethylated 4.4103e-79 1 hypermethylated 1.3653e-29 1.00000 hypermethylated 1.3653e-26 1 hypermethylated 0.640871 8.2892e-07 hypermethylated 1.0362e-04 hypermethylated 0.758492 0.690852 0.0594216 12 0.732763 0.6748276 0.0579355 7.6894e-03 0.59088631 weaklyHypermeth 2.6193e-01 1.00000 insignificant 5.9517e-02 0.5661645 insignificant 1.0000e+00 1 insignificant 0.0552386 2.2374e-01 insignificant 1.000000 insignificant 0.082729 0.690852 -0.617381 12 0.095179 0.6748276 -0.579649 1.0000e+00 3.4570e-48 hypomethylated 1.0000e+00 3.4570e-45 hypomethylated 1.0000e+00 4.4422e-17 hypomethylated 1.000000 4.4422e-14 hypomethylated -0.585632 4.5699e-06 hypomethylated 1.1425e-03 hypomethylated chr12 110375101 110376101 117896 SH2B3 ENSG00000111252 0.889492 798 16 0.818534 839 16 0.88426 328 16 0.938549 767 14 0.84602 274 16 0.878356 677 12 0.834604 250 13 0.886295 617 15 0.80374 391 14 0.89423 422 16 0.854152 719 16 0.91003 110 13 0.88092 550 16 0.919945 299 14 0.82383 489 14 0.769257 113 12 0.82601 52 5 0.881466 893 14 0.8868489 794 16 0.9026886 536 10 0.73579 226 9 0.88580 149 9 0.8825300 365 14 0.62647 199 9 0.95738 116 9 0.904102 944 14 0.883755 192 9 0.67604 165 9 0.876227 791 15 0.918249 989 14 0.912564 916 14 0.864853 515 15 0.8460058 522 16 0.822372 323 15 0.701921 688 10 0.934343 30 2 0.784742 314 12 0.886164 606 10 0.8920480 563 14 0.907114 638 14 0.9038281 650 14 0.881413 490 16 0.9654173 605 14 0.938645 0.866045 0.922838 0.930140 0.94661 0.912514 0.903282 0.947363 0.90580 0.93827 0.911931 0.935835 0.920731 0.946819 0.96222 0.771475 0.87294 0.929721 0.960199 0.948776 0.96778 0.950738 0.911557 0.85270 0.93982 0.952333 0.923526 0.84974 0.938403 0.974014 0.957836 0.932962 0.8925393 0.809726 0.695871 0.9169550 0.864689 0.942123 0.9392144 0.952612 0.9492516 0.940587 0.952873 9 0.916213 0.936770 -0.0123984 14 0.838775 0.801943 0.0368321 0.144616 0.0104832 weaklyHypometh 1 0.87360 insignificant 0.79661 0.20128962 insignificant 1 1.00000 insignificant 0.02281363 0.483757 insignificant 1 insignificant 0.916213 0.824003 0.09367011 14 0.838775 0.784711 0.054063 1.1744e-05 0.6095003 weaklyHypermeth 3.2622e-04 1 weaklyHypermeth 1.2417e-01 0.1232660 insignificant 1.0000e+00 1.00000 insignificant 0.03720287 3.2234e-01 insignificant 1.0000e+00 insignificant 0.916288 0.949762 -0.0230246 14 0.849219 0.9047155 -0.05549681 9.9987e-01 0.00788512 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9909e-01 0.03739416 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0435031 0.03781125 weaklyHypometh 1.00000 insignificant 0.936770 0.824003 0.1053797 14 0.801943 0.784711 0.017231 1.0879e-04 0.81379 weaklyHypermeth 2.8629e-03 1 weaklyHypermeth 2.6271e-01 0.46600 insignificant 1.0000e+00 1 insignificant 0.014389 7.5309e-01 insignificant 1.0000e+00 insignificant 0.936178 0.949762 -0.0111295 14 0.838183 0.9047155 -0.0665329 7.0525e-01 0.11701308 insignificant 1.0000e+00 1.00000 insignificant 7.5264e-01 0.1136886 insignificant 1.0000e+00 1 insignificant -0.0663167 6.7115e-02 insignificant 1.000000 insignificant 0.822521 0.949762 -0.118341 13 0.763305 0.9047155 -0.141411 8.2492e-01 1.9186e-03 weaklyHypometh 1.0000e+00 5.8141e-02 weaklyHypometh 5.3758e-01 1.8309e-01 insignificant 1.000000 1.0000e+00 insignificant -0.080706 6.1738e-02 insignificant 1.0000e+00 insignificant chr12 112595276 112596276 117941 LHX5 ENSG00000089116 0.804855 106 5 0.646416 100 6 0.52044 156 6 0.631133 98 4 0.81389 41 4 0.876945 123 5 0.682458 70 5 0.579678 54 5 0.74094 57 2 0.80442 44 4 0.811845 170 6 0.76239 64 5 0.79096 66 6 NA 0 0 0.70336 116 6 0.743519 78 4 0.93091 63 4 0.734694 56 4 0.8577130 92 6 0.5944648 83 6 0.76892 54 5 0.83333 8 0 0.8154617 98 6 0.73400 48 6 1.00000 5 0 0.786781 95 7 0.954451 71 5 0.80983 57 4 0.833333 18 2 0.747977 105 7 0.814521 78 6 0.871334 138 5 0.2278439 123 7 0.241234 110 6 0.316850 101 7 0.500000 17 0 0.489087 54 6 0.386516 104 6 0.5835944 105 5 0.502158 95 6 0.4523810 31 4 0.591802 82 5 0.5935185 121 5 0.826274 0.705900 0.588875 0.771825 0.80235 0.935922 0.706696 0.652294 0.80031 0.86594 0.860088 0.821695 0.772973 NA 0.75901 0.794003 0.92342 0.838828 0.912881 0.684345 0.82271 0.778396 0.918484 0.82701 0.91787 0.836258 0.931518 0.84592 0.823297 0.793363 0.876007 0.883599 0.3042794 0.330347 0.440335 0.7211538 0.532494 0.339304 0.6346296 0.741147 0.4050672 0.690707 0.674038 0 0.769701 0.833548 -0.0730553 6 0.736380 0.808406 -0.0720259 0.999611 0.0012715 weaklyHypometh 1 0.21328 insignificant 0.99943 0.00058221 weaklyHypometh 1 0.58221 insignificant -0.09235288 0.010563 lowCoverage 1 lowCoverage 0.769701 0.339882 0.40685661 6 0.736380 0.323975 0.412405 1.7155e-24 1.0000000 hypermethylated 2.1444e-22 1 hypermethylated 2.0721e-11 1.0000000 hypermethylated 6.9070e-09 1.00000 hypermethylated 0.37822026 1.3158e-04 lowCoverage 7.7402e-03 lowCoverage 0.769701 0.589862 0.1466760 5 0.736380 0.5817924 0.15458757 4.7492e-06 0.99827120 weaklyHypermeth 4.7492e-04 1.00000 weaklyHypermeth 8.3382e-05 0.99957410 weaklyHypermeth 1.3319e-02 1.00000 weaklyHypermeth 0.1937846 0.00035042 lowCoverage 0.13696 lowCoverage 0.833548 0.339882 0.4773688 6 0.808406 0.323975 0.484431 4.6504e-25 1.00000 hypermethylated 7.7507e-23 1 hypermethylated 3.6250e-11 1.00000 hypermethylated 1.5781e-08 1 hypermethylated 0.470573 3.8863e-05 lowCoverage 3.5330e-03 lowCoverage 0.833548 0.589862 0.2167539 5 0.808406 0.5817924 0.2266134 1.0258e-10 0.99997767 hypermethylated 2.0516e-08 1.00000 hypermethylated 2.8060e-07 0.9999330 hypermethylated 9.3533e-05 1 hypermethylated 0.2861375 2.2196e-05 lowCoverage 0.022196 lowCoverage 0.339882 0.589862 -0.271479 5 0.323975 0.5817924 -0.257817 9.9876e-01 1.6718e-05 hypomethylated 1.0000e+00 7.9608e-04 hypomethylated 9.8411e-01 4.9888e-03 weaklyHypometh 1.000000 2.1437e-01 insignificant -0.184436 1.1437e-02 weaklyHypometh 4.3987e-01 insignificant chr12 112725062 112726062 117945 LHX5 ENSG00000089116 0.829167 98 3 0.639902 167 6 0.80292 60 5 0.808642 128 6 0.59028 31 2 0.909397 144 6 0.561292 54 4 0.855758 92 6 0.71111 30 3 0.92708 38 2 0.884084 190 6 0.60000 8 0 0.57143 42 3 0.916667 7 1 0.70139 33 3 0.666667 7 0 0.37500 6 0 0.833333 132 3 0.7762545 67 3 0.8709882 111 4 0.79388 62 6 0.69926 74 3 0.7699191 63 6 0.91270 81 6 0.86184 239 6 0.861162 122 6 0.722668 79 3 0.58333 23 0 0.630524 103 6 0.686070 158 6 0.781043 149 6 0.884661 150 6 0.6874745 117 6 0.718585 108 6 0.474419 170 5 0.800000 153 6 0.364776 76 6 0.571286 171 6 0.6576998 125 3 0.758968 108 6 0.7698802 86 6 0.562224 124 6 0.6904040 118 6 0.801457 0.589180 0.794090 0.795210 0.67215 0.876895 0.545933 0.820096 0.74459 0.86020 0.893302 0.636215 0.725053 NA 0.70943 0.707196 0.63899 0.750000 0.712401 0.742884 0.90551 0.510346 0.738556 0.92419 0.78738 0.844890 0.849710 0.60636 0.748366 0.730113 0.735311 0.838470 0.7501544 0.605550 0.359710 0.8223684 0.611239 0.414045 0.4641428 0.656266 0.6163141 0.526028 0.505781 1 0.769604 0.780600 0.0027204 6 0.830262 0.771604 0.0586576 0.375721 0.6520657 insignificant 1 1.00000 insignificant 0.43438 0.45829310 insignificant 1 1.00000 insignificant -0.02401946 0.597562 lowCoverage 1 lowCoverage 0.768166 0.621690 0.20657029 6 0.757729 0.454141 0.303588 5.9812e-05 0.9999758 hypermethylated 1.3594e-03 1 hypermethylated 8.7927e-03 0.9993269 weaklyHypermeth 2.1446e-01 1.00000 insignificant 0.13881153 1.0147e-01 lowCoverage 1.0000e+00 lowCoverage 0.769284 0.531194 0.2075324 6 0.801972 0.6652660 0.13670641 2.4615e-06 0.94728790 hypermethylated 2.9257e-04 1.00000 hypermethylated 2.2827e-03 0.74397291 weaklyHypermeth 1.5218e-01 1.00000 insignificant 0.0537330 0.30910347 lowCoverage 1.00000 lowCoverage 0.778204 0.621690 0.1925123 6 0.675154 0.454141 0.221013 1.7819e-04 0.99998 weaklyHypermeth 4.3460e-03 1 weaklyHypermeth 2.6346e-02 1.00000 weaklyHypermeth 5.4887e-01 1 insignificant 0.162831 6.0902e-02 insignificant 1.0000e+00 insignificant 0.781298 0.531194 0.2131939 6 0.800205 0.6652660 0.1349392 5.7925e-06 0.75053859 hypermethylated 5.7925e-04 1.00000 hypermethylated 1.9215e-03 0.6988329 weaklyHypermeth 1.9215e-01 1 insignificant 0.0777524 1.4037e-01 insignificant 1.000000 insignificant 0.624842 0.531194 0.010928 6 0.605522 0.6652660 -0.059744 7.4817e-01 2.6371e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7789e-01 1.3460e-01 insignificant 1.000000 1.0000e+00 insignificant -0.085079 3.0046e-01 insignificant 1.0000e+00 insignificant chr12 113860439 113861439 117986 ENSG00000209253 0.838046 241 7 0.843456 206 8 0.74558 88 4 0.826759 198 5 0.61464 80 7 0.770868 345 8 0.666544 62 6 0.892237 188 10 0.57201 85 4 0.68035 85 4 0.900510 311 10 0.27574 46 4 0.70382 195 7 0.744710 81 5 0.59000 104 4 0.747475 18 2 0.60606 20 2 0.544248 223 6 0.9107723 328 8 0.8960822 318 8 0.90706 114 8 0.37037 58 4 0.7887958 136 8 0.53119 87 6 0.82100 138 6 0.912025 359 10 0.742409 184 6 0.77049 49 5 0.803021 383 8 0.936385 340 8 0.900971 370 10 0.958907 348 8 0.7814035 265 8 0.900011 385 10 0.750000 332 7 0.508509 139 6 0.756926 94 9 0.505052 475 10 0.3133164 207 6 0.556867 237 9 0.1813703 210 7 0.310607 360 5 0.6074243 189 6 0.816596 0.887920 0.871136 0.899211 0.86993 0.836124 0.818957 0.813325 0.85514 0.89435 0.907872 0.477163 0.839899 0.878249 0.83564 0.732948 0.55923 0.658254 0.879779 0.866865 0.97420 0.484479 0.895987 0.74953 0.84464 0.924350 0.855787 0.90694 0.876369 0.934593 0.875299 0.927883 0.9359836 0.945252 0.633663 0.7801519 0.993281 0.943326 0.3226814 0.450972 0.1914679 0.235312 0.473236 2 0.834523 0.886461 -0.0485074 6 0.767688 0.820092 -0.0524033 0.988491 0.0051804 weaklyHypometh 1 0.47094 insignificant 0.99989 0.00264417 weaklyHypometh 1 0.66104 insignificant -0.06838999 0.279349 insignificant 1 insignificant 0.834575 0.768047 -0.00280171 6 0.788808 0.611142 0.177665 4.8164e-04 0.0187844 weaklyHypometh 1.0248e-02 1 weaklyHypometh 4.4661e-01 0.0046600 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.01817787 8.1197e-01 insignificant 1.0000e+00 insignificant 0.834523 0.419784 0.4361332 6 0.767688 0.3881677 0.37952070 3.0457e-35 0.99999992 hypermethylated 3.0457e-32 1.00000 hypermethylated 1.0902e-10 0.99998848 hypermethylated 1.0902e-07 1.00000 hypermethylated 0.3245778 0.01160951 weaklyHypermeth 0.89801 insignificant 0.886461 0.768502 0.0591615 8 0.820092 0.672256 0.147835 3.1073e-04 0.75794 weaklyHypermeth 7.2263e-03 1 weaklyHypermeth 1.5292e-01 0.31417 insignificant 1.0000e+00 1 insignificant 0.086568 3.1601e-01 insignificant 1.0000e+00 insignificant 0.886461 0.419784 0.4838793 6 0.820092 0.3881677 0.4319240 4.7757e-30 1.00000000 hypermethylated 4.7757e-27 1.00000 hypermethylated 1.0649e-11 1.0000000 hypermethylated 1.0649e-08 1 hypermethylated 0.3929678 4.0305e-03 weaklyHypermeth 0.575791 insignificant 0.768502 0.419784 0.355862 6 0.672256 0.3881677 0.284089 1.9934e-13 9.9739e-01 hypermethylated 9.9669e-11 1.0000e+00 hypermethylated 3.9430e-05 9.9996e-01 hypermethylated 0.019715 1.0000e+00 hypermethylated 0.306400 1.8041e-02 weaklyHypermeth 5.8195e-01 insignificant chr12 113860803 113861803 117987 ENSG00000209253 0.824882 218 6 0.892729 201 7 0.78066 84 4 0.814918 183 4 0.55958 78 7 0.749377 317 7 0.618908 57 5 0.890552 177 9 0.58230 83 4 0.64483 84 4 0.903345 287 9 0.27574 46 4 0.69313 190 6 0.702162 79 5 0.54444 103 4 0.747475 18 2 0.60606 20 2 0.539906 199 5 0.9051684 308 7 0.8962744 299 7 0.89673 106 7 0.35556 49 3 0.7653287 133 8 0.53119 87 6 0.84055 84 5 0.921858 342 9 0.705611 171 5 0.77049 49 5 0.781135 377 7 0.946690 322 7 0.909576 353 9 0.958614 322 7 0.8126705 253 7 0.910506 349 9 0.857143 307 6 0.557829 90 5 0.775476 87 8 0.532886 420 9 0.3204819 188 5 0.566110 218 8 0.1702725 178 6 0.321004 302 4 0.6498263 158 5 0.815196 0.892799 0.874848 0.898870 0.86863 0.834843 0.817147 0.812367 0.85870 0.89330 0.908201 0.473543 0.840298 0.877031 0.83400 0.731885 0.55643 0.659003 0.879077 0.866586 0.97394 0.484879 0.894946 0.74843 0.84605 0.925358 0.854345 0.90742 0.875133 0.935605 0.875816 0.927547 0.9403434 0.946649 0.640000 0.7863208 0.997500 0.950213 0.3232767 0.450745 0.1905701 0.235079 0.475710 2 0.833003 0.891304 -0.0540819 5 0.757583 0.820245 -0.0626621 0.996955 0.0026320 weaklyHypometh 1 0.29245 insignificant 0.99993 0.00180813 weaklyHypometh 1 0.60271 insignificant -0.07332155 0.264623 insignificant 1 insignificant 0.833058 0.821381 -0.03713886 5 0.781825 0.639104 0.142720 1.2347e-01 0.0090994 weaklyHypometh 1.0000e+00 1 insignificant 9.6896e-01 0.0020190 weaklyHypometh 1.0000e+00 0.67299 insignificant -0.03246311 6.7349e-01 insignificant 1.0000e+00 insignificant 0.833003 0.440613 0.4260721 5 0.757583 0.3998509 0.35773191 5.3390e-30 0.99999913 hypermethylated 2.6695e-27 1.00000 hypermethylated 8.4969e-09 0.99993087 hypermethylated 4.2484e-06 1.00000 hypermethylated 0.3030831 0.02172097 weaklyHypermeth 1.00000 insignificant 0.891304 0.821927 0.0277482 7 0.820245 0.710116 0.110129 1.8220e-02 0.64008 weaklyHypermeth 3.2536e-01 1 insignificant 6.9365e-01 0.21083 insignificant 1.0000e+00 1 insignificant 0.040858 6.3260e-01 insignificant 1.0000e+00 insignificant 0.891304 0.440613 0.4794570 5 0.820245 0.3998509 0.4203940 5.0690e-26 1.00000000 hypermethylated 2.5345e-23 1.00000 hypermethylated 3.5522e-10 1.0000000 hypermethylated 1.7761e-07 1 hypermethylated 0.3764047 7.9162e-03 weaklyHypermeth 0.793549 insignificant 0.821927 0.440613 0.403498 5 0.710116 0.3998509 0.310265 7.8917e-14 9.9675e-01 hypermethylated 7.8917e-11 1.0000e+00 hypermethylated 2.1270e-05 9.9998e-01 hypermethylated 0.019715 1.0000e+00 hypermethylated 0.335546 1.6088e-02 weaklyHypermeth 5.3628e-01 insignificant chr12 114622729 114623729 118043 ENSG00000209253 0.877520 128 4 0.776960 134 6 0.8234127 63 4 0.808511 66 2 0.832080 31 2 0.846223 113 3 0.781250 20 2 0.836580 101 4 0.715133 60 4 0.8226305 72 4 0.852138 103 4 0.803571 12 1 0.858732 104 4 0.923077 13 1 0.796717 52 4 1.0000000 2 0 0.7208333 17 2 0.928499 95 4 0.845238 87 4 0.728571 92 2 0.8557692 38 3 0.710000 30 1 0.8267361 77 5 0.846154 24 2 0.681818 16 1 0.8994690 143 6 0.500579 46 2 0.4062500 17 1 0.9001533 110 4 0.9099855 180 6 0.9221531 126 6 0.730337 132 5 0.413499 158 6 0.6057692 97 4 0.3333333 69 3 0.10000 32 3 0.841071 40 4 0.0238893 200 6 0.737218 104 4 0.881125 124 4 0.7334402 91 4 0.961901 76 4 0.8538889 66 4 0.841899 0.783861 0.657895 0.790407 0.886361 0.875104 0.827303 0.8519367 0.813895 0.8195941 0.8719011 0.775376 0.802890 0.877235 0.862241 0.8377940 0.6019737 0.815704 0.869433 0.8020050 0.915486 0.826842 0.885280 0.749294 0.751196 0.8785885 0.715369 0.75920228 0.8957013 0.928558 0.903852 0.799663 0.453044 0.435256 0.6960213 0.02631579 0.746335 0.022485 0.880953 0.9083962 0.844425 0.9341723 0.808443 1 0.819780 0.863685 -0.04365784 4 0.819298 0.866484 -0.0471862 9.9297e-01 0.04629196 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.3439e-01 0.48363629 lowCoverage 1.0000000 1.00000 lowCoverage 6.3100e-02 0.2372290 lowCoverage 1 lowCoverage 0.819780 0.317114 0.4708372 4 0.819298 0.369010 0.4502877 3.7745e-17 1.0000e+00 lowCoverage 1.9866e-15 1.0000e+00 lowCoverage 1.0135e-06 1.0000e+00 lowCoverage 4.8260e-05 1.0000e+00 lowCoverage 0.4426235 1.6388e-02 lowCoverage 3.4652e-01 lowCoverage 0.819780 0.8806941 -0.0430865 4 0.819298 0.786195 0.03310265 4.5225e-01 9.8560e-03 lowCoverage 1.0000e+00 0.878303 lowCoverage 4.6932e-01 8.6159e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.00463090 9.2463e-01 lowCoverage 1.00000000 lowCoverage 0.863685 0.317114 0.5394431 5 0.866484 0.369010 0.4974739 1.4773e-13 1.0000e+00 hypermethylated 8.6899e-12 1.0000e+00 hypermethylated 2.5082e-05 1.0000e+00 hypermethylated 1.0451e-03 1.0000e+00 hypermethylated 0.3795233 2.7579e-02 lowCoverage 5.3036e-01 lowCoverage 0.863685 0.8806941 0.0021158 4 0.866484 0.786195 0.0802889 8.3410e-02 3.9893e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.7748e-01 0.11175442 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0677311 3.1939e-01 lowCoverage 1.0000000 lowCoverage 0.317114 0.8806941 -0.5038405 4 0.369010 0.786195 -0.4171850 0.9992262 6.9359e-07 lowCoverage 1.00000 4.6239e-05 lowCoverage 0.9998352 2.3632e-04 lowCoverage 1 1.6877e-02 lowCoverage -0.447254 0.01443971 lowCoverage 0.481324 lowCoverage chr12 114807141 114808141 118058 ENSG00000200112 0.913114 448 6 0.836750 297 6 0.7619636 113 6 0.890455 414 6 0.970513 51 2 0.901070 444 6 0.884487 117 5 0.854094 107 5 0.919825 87 5 0.7727273 54 2 0.860965 258 6 0.896970 37 2 0.943411 73 4 0.860000 21 3 0.751515 68 2 0.7166667 16 2 0.6181818 37 2 0.790373 347 5 0.892179 143 5 0.895797 365 6 0.9568627 50 3 0.764302 42 2 0.8719753 159 6 0.885202 70 6 0.946627 179 5 0.8840262 315 6 0.693122 65 5 0.8806878 66 5 0.9139328 167 6 0.9500489 275 6 0.9541029 284 6 0.942960 356 6 0.609577 207 6 0.6919956 118 6 0.7214662 208 5 0.38723 155 6 0.590836 157 6 0.1111927 383 6 0.794482 415 6 0.701121 313 6 0.8233467 446 6 0.824740 238 5 0.8143824 370 6 0.913381 0.837932 0.808002 0.876746 0.923367 0.881598 0.852344 0.8305473 0.886792 0.8530589 0.8645759 0.822946 0.875004 0.909341 0.822804 0.6982542 0.6751743 0.714631 0.882419 0.8906086 0.975953 0.786134 0.893212 0.776996 0.945749 0.8960633 0.826894 0.86203454 0.8516937 0.948815 0.928428 0.954855 0.607643 0.655857 0.4076123 0.33688816 0.613441 0.145670 0.782409 0.6967108 0.772792 0.7229809 0.768853 2 0.869565 0.914201 -0.04766075 6 0.867358 0.911921 -0.0445624 9.9962e-01 0.00021567 weaklyHypometh 1.0000e+00 0.07189 weaklyHypometh 9.9146e-01 0.03523510 weaklyHypometh 1.0000000 1.00000 insignificant -4.0435e-02 0.1978055 lowCoverage 1 lowCoverage 0.869565 0.456026 0.4206948 6 0.867358 0.476415 0.3909427 3.4685e-20 1.0000e+00 hypermethylated 2.3123e-18 1.0000e+00 hypermethylated 1.0045e-09 1.0000e+00 hypermethylated 9.1319e-08 1.0000e+00 hypermethylated 0.3278369 1.6980e-02 lowCoverage 3.4652e-01 lowCoverage 0.869565 0.7665544 0.1026392 6 0.867358 0.786235 0.08112356 1.2391e-07 9.7474e-01 weaklyHypermeth 1.1264e-05 1.000000 weaklyHypermeth 1.2565e-04 9.7933e-01 weaklyHypermeth 1.2565e-02 1.000000 weaklyHypermeth 0.05493834 9.8297e-02 lowCoverage 1.00000000 lowCoverage 0.914201 0.456026 0.4625014 6 0.911921 0.476415 0.4355051 1.7251e-15 1.0000e+00 hypermethylated 1.0782e-13 1.0000e+00 hypermethylated 1.0610e-08 1.0000e+00 hypermethylated 8.8421e-07 1.0000e+00 hypermethylated 0.3682716 1.0317e-02 weaklyHypermeth 2.6453e-01 insignificant 0.914201 0.7665544 0.1435114 6 0.911921 0.786235 0.1256860 2.0399e-11 9.9978e-01 weaklyHypermeth 2.9142e-09 1.0000000 weaklyHypermeth 7.5565e-06 0.99987143 weaklyHypermeth 9.7352e-04 1.00000 weaklyHypermeth 0.0953730 1.4018e-02 weaklyHypermeth 0.5863740 insignificant 0.456026 0.7665544 -0.3141137 6 0.476415 0.786235 -0.3098191 0.9999972 4.7695e-06 hypomethylated 1.00000 2.2712e-04 hypomethylated 0.9999956 1.5767e-04 hypomethylated 1 1.4333e-02 hypomethylated -0.272899 0.03340754 weaklyHypometh 0.742390 insignificant chr12 114807281 114808281 118059 ENSG00000200112 0.913114 448 6 0.836750 297 6 0.7619636 113 6 0.890455 414 6 0.970513 51 2 0.901070 444 6 0.884487 117 5 0.854094 107 5 0.919825 87 5 0.7727273 54 2 0.860965 258 6 0.896970 37 2 0.943411 73 4 0.860000 21 3 0.751515 68 2 0.7166667 16 2 0.6181818 37 2 0.790373 347 5 0.892179 143 5 0.895797 365 6 0.9568627 50 3 0.764302 42 2 0.8719753 159 6 0.885202 70 6 0.946627 179 5 0.8840262 315 6 0.693122 65 5 0.8806878 66 5 0.9139328 167 6 0.9500489 275 6 0.9541029 284 6 0.942960 356 6 0.609577 207 6 0.6919956 118 6 0.7214662 208 5 0.38723 155 6 0.590836 157 6 0.1111927 383 6 0.794482 415 6 0.701121 313 6 0.8233467 446 6 0.824740 238 5 0.8143824 370 6 0.913381 0.837932 0.808002 0.876746 0.923367 0.881598 0.852344 0.8305473 0.886792 0.8530589 0.8645759 0.822946 0.875004 0.909341 0.822804 0.6982542 0.6751743 0.714631 0.882419 0.8906086 0.975953 0.786134 0.893212 0.776996 0.945749 0.8960633 0.826894 0.86203454 0.8516937 0.948815 0.928428 0.954855 0.607643 0.655857 0.4076123 0.33688816 0.613441 0.145670 0.782409 0.6967108 0.772792 0.7229809 0.768853 2 0.869565 0.914201 -0.04766075 6 0.867358 0.911921 -0.0445624 9.9962e-01 0.00021567 weaklyHypometh 1.0000e+00 0.07189 weaklyHypometh 9.9146e-01 0.03523510 weaklyHypometh 1.0000000 1.00000 insignificant -4.0435e-02 0.1978055 lowCoverage 1 lowCoverage 0.869565 0.456026 0.4206948 6 0.867358 0.476415 0.3909427 3.4685e-20 1.0000e+00 hypermethylated 2.3123e-18 1.0000e+00 hypermethylated 1.0045e-09 1.0000e+00 hypermethylated 9.1319e-08 1.0000e+00 hypermethylated 0.3278369 1.6980e-02 lowCoverage 3.4652e-01 lowCoverage 0.869565 0.7665544 0.1026392 6 0.867358 0.786235 0.08112356 1.2391e-07 9.7474e-01 weaklyHypermeth 1.1264e-05 1.000000 weaklyHypermeth 1.2565e-04 9.7933e-01 weaklyHypermeth 1.2565e-02 1.000000 weaklyHypermeth 0.05493834 9.8297e-02 lowCoverage 1.00000000 lowCoverage 0.914201 0.456026 0.4625014 6 0.911921 0.476415 0.4355051 1.7251e-15 1.0000e+00 hypermethylated 1.0782e-13 1.0000e+00 hypermethylated 1.0610e-08 1.0000e+00 hypermethylated 8.8421e-07 1.0000e+00 hypermethylated 0.3682716 1.0317e-02 weaklyHypermeth 2.6453e-01 insignificant 0.914201 0.7665544 0.1435114 6 0.911921 0.786235 0.1256860 2.0399e-11 9.9978e-01 weaklyHypermeth 2.9142e-09 1.0000000 weaklyHypermeth 7.5565e-06 0.99987143 weaklyHypermeth 9.7352e-04 1.00000 weaklyHypermeth 0.0953730 1.4018e-02 weaklyHypermeth 0.5863740 insignificant 0.456026 0.7665544 -0.3141137 6 0.476415 0.786235 -0.3098191 0.9999972 4.7695e-06 hypomethylated 1.00000 2.2712e-04 hypomethylated 0.9999956 1.5767e-04 hypomethylated 1 1.4333e-02 hypomethylated -0.272899 0.03340754 weaklyHypometh 0.742390 insignificant chr12 115370315 115371315 118114 MED13L ENSG00000123066 0.532446 84 5 0.540033 54 3 0.5833333 12 0 0.625733 94 5 0.349206 24 3 0.659429 191 7 0.562500 25 3 0.528322 53 3 0.777778 17 3 0.7000000 20 4 0.876449 68 3 0.555556 27 3 0.275000 30 3 0.708333 24 3 0.330853 25 3 1.0000000 5 0 0.6649798 81 2 0.673949 118 8 0.740741 27 3 0.599414 108 5 0.5357143 17 1 0.620238 22 3 0.7848485 46 5 0.636905 22 3 0.522321 25 3 0.6938582 69 3 0.777778 7 0 0.6666667 3 0 0.4293415 38 3 0.5363304 59 3 0.6354515 77 3 0.788512 97 5 0.600275 41 3 0.5888889 17 3 0.4853846 78 3 0.66667 6 0 0.683333 26 3 0.6349673 55 3 0.631203 59 5 0.773885 97 5 0.6576900 79 5 0.691775 48 5 0.6569147 87 5 0.666822 0.728992 0.595238 0.793919 0.472411 0.723003 0.750000 0.5315126 0.793651 0.8000000 0.8358006 0.555556 0.383333 0.732143 0.472269 1.0000000 1.0000000 0.734432 0.759259 0.7257660 0.706349 0.666213 0.902381 0.865646 0.698980 0.7563904 0.761905 NA 0.5902015 0.728223 0.767220 0.846038 0.639063 0.589683 0.6457875 0.69047619 0.691667 0.639776 0.786172 0.7134841 0.774510 0.8155844 0.656707 0 0.632672 0.721992 -0.07846849 3 0.552807 0.639144 -0.0863377 9.9741e-01 0.00980189 lowCoverage 1.0000e+00 0.65346 lowCoverage 9.9420e-01 0.07222864 lowCoverage 1.0000000 1.00000 lowCoverage -2.1461e-02 0.6782082 lowCoverage 1 lowCoverage 0.644769 0.641256 0.0429813 3 0.533468 0.565005 -0.0315377 2.5830e-01 4.3761e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0826e-01 8.4491e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0042835 9.3060e-01 lowCoverage 1.0000e+00 lowCoverage 0.641214 0.7108108 -0.0518272 5 0.656272 0.696576 -0.04030448 9.9212e-01 1.2473e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8510e-01 1.4391e-01 insignificant 1.0000e+00 1.000000 insignificant -0.06809073 1.5548e-01 lowCoverage 1.00000000 lowCoverage 0.727473 0.641256 0.1141388 3 0.644156 0.565005 0.0791505 8.8869e-04 9.8515e-01 lowCoverage 1.3886e-02 1.0000e+00 lowCoverage 1.1366e-02 9.9811e-01 lowCoverage 1.9596e-01 1.0000e+00 lowCoverage 0.0257445 5.6820e-01 lowCoverage 1.0000e+00 lowCoverage 0.721992 0.7019499 0.0319916 3 0.639144 0.595435 0.0437095 2.9065e-01 6.6454e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.2002e-01 0.77348192 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0466297 2.7936e-01 lowCoverage 1.0000000 lowCoverage 0.641256 0.7086957 -0.0850635 3 0.565005 0.548227 0.0167785 0.4922259 1.2556e-02 lowCoverage 1.00000 1.7937e-01 lowCoverage 0.8410585 3.3286e-02 lowCoverage 1 5.5134e-01 lowCoverage -0.072374 0.09076603 lowCoverage 1.000000 lowCoverage chr12 115381734 115382734 118115 MED13L ENSG00000123066 0.891106 90 4 0.880813 328 6 0.6228114 87 6 0.963845 72 4 0.879301 72 6 0.960298 151 4 0.892296 130 6 0.906271 140 6 0.816317 114 6 0.9847222 63 5 0.862223 368 6 0.861291 59 6 0.902958 51 6 0.791667 46 4 0.981481 57 5 0.8678571 27 3 0.8962963 29 3 0.884921 55 2 0.909200 131 6 0.918914 164 4 0.9239082 86 6 0.597222 28 3 0.7928070 130 5 0.809465 129 6 0.937500 10 0 0.8048446 260 6 0.905823 97 6 0.9233766 70 4 0.8790396 123 6 0.9201113 292 6 0.8823671 213 6 0.791962 229 4 0.502422 187 6 0.4032839 143 6 0.7454212 253 4 0.75000 6 0 0.622797 209 6 0.7827385 298 6 0.806942 144 4 0.819688 112 4 0.8362500 55 2 0.725000 14 2 0.5072464 58 4 0.844783 0.811662 0.486259 0.947159 0.842750 0.930553 0.881237 0.8883291 0.721370 1.0000000 0.8521997 0.881416 0.876989 0.770563 0.962482 0.8877551 0.8638750 0.766852 0.892711 0.8663572 0.884801 0.645599 0.824129 0.904515 0.915584 0.9101244 0.868440 0.90363749 0.8391226 0.890785 0.843786 0.865721 0.364935 0.202194 0.4842301 0.66233766 0.439326 0.613440 0.685424 0.7167160 0.826450 0.7000000 0.677019 2 0.863026 0.881611 -0.02431372 6 0.878209 0.899964 -0.0217559 9.8656e-01 0.14293653 insignificant 1.0000e+00 1.00000 insignificant 7.1136e-01 0.73071621 insignificant 1.0000000 1.00000 insignificant 3.6361e-02 0.2831769 lowCoverage 1 lowCoverage 0.863026 0.513686 0.3206657 6 0.878209 0.614388 0.2638210 1.2226e-14 1.0000e+00 hypermethylated 5.8217e-13 1.0000e+00 hypermethylated 7.2162e-05 9.9960e-01 hypermethylated 2.4883e-03 1.0000e+00 hypermethylated 0.2492858 9.3625e-03 lowCoverage 2.3406e-01 lowCoverage 0.863026 0.7049608 0.1437230 4 0.878209 0.711806 0.16640306 2.4057e-06 9.9896e-01 lowCoverage 2.0048e-04 1.000000 lowCoverage 6.5451e-03 9.3156e-01 lowCoverage 2.6937e-01 1.000000 lowCoverage 0.14470428 7.5236e-02 lowCoverage 1.00000000 lowCoverage 0.881611 0.513686 0.3624628 6 0.899964 0.614388 0.2855769 8.1227e-13 9.9999e-01 hypermethylated 4.0614e-11 1.0000e+00 hypermethylated 5.8710e-04 9.9880e-01 hypermethylated 1.5346e-02 1.0000e+00 hypermethylated 0.2129251 1.7333e-02 lowCoverage 3.9394e-01 lowCoverage 0.881611 0.7049608 0.1731036 4 0.899964 0.711806 0.1881589 3.0334e-08 9.9984e-01 lowCoverage 3.0334e-06 1.0000000 lowCoverage 7.1616e-03 0.95687238 lowCoverage 2.9840e-01 1.00000 lowCoverage 0.1083436 1.5960e-01 lowCoverage 1.0000000 lowCoverage 0.513686 0.7049608 -0.2847450 4 0.614388 0.711806 -0.0974180 0.8855480 4.5238e-03 lowCoverage 1.00000 8.6997e-02 lowCoverage 0.9935534 3.1115e-02 lowCoverage 1 5.5134e-01 lowCoverage -0.104582 0.26342543 lowCoverage 1.000000 lowCoverage chr12 115459127 115460127 118118 NCRNA00173 ENSG00000196668 0.843914 208 6 0.691224 248 6 0.8008619 137 6 0.732851 176 4 0.701868 88 5 0.867300 265 6 0.881632 123 6 0.667050 122 6 0.827287 128 6 0.8953746 93 5 0.760015 250 6 0.822251 62 4 0.619563 109 5 0.847086 42 3 0.605449 122 5 0.6482143 45 3 0.7138889 92 4 0.701033 114 4 0.787151 151 6 0.680051 224 6 0.7597403 63 6 0.854762 26 2 0.8695534 124 6 0.840737 99 6 0.708333 20 2 0.7842229 211 6 0.741633 79 6 0.8064935 59 5 0.6130172 136 6 0.8740040 222 6 0.7400794 204 6 0.708685 278 6 0.486261 151 6 0.6616228 106 6 0.9675824 119 5 0.75000 9 0 0.790170 172 6 0.6849440 167 6 0.802881 152 6 0.802033 168 6 0.8605579 159 4 0.857323 35 3 0.7962302 124 4 0.875455 0.835280 0.821736 0.843879 0.901665 0.908819 0.872096 0.8552675 0.822676 0.8431308 0.8570265 0.868116 0.785918 0.854502 0.861260 0.8231250 0.8151856 0.778382 0.856554 0.8082556 0.814697 0.869419 0.910194 0.831692 0.631923 0.9038786 0.760549 0.80529950 0.8471345 0.873875 0.869782 0.807670 0.643775 0.809539 0.9344570 0.91954123 0.871150 0.765863 0.847728 0.8679831 0.801489 0.8831061 0.825452 2 0.847446 0.862590 -0.01654469 6 0.712615 0.738994 -0.0263794 9.7388e-01 0.27065813 insignificant 1.0000e+00 1.00000 insignificant 7.6671e-01 0.52777984 insignificant 1.0000000 1.00000 insignificant -2.0402e-02 0.5081489 insignificant 1 insignificant 0.847446 0.770718 0.0767394 6 0.712615 0.648809 0.0638063 8.7215e-04 4.7711e-01 weaklyHypermeth 1.2459e-02 1.0000e+00 weaklyHypermeth 4.8766e-01 2.3039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0312733 6.6160e-01 lowCoverage 1.0000e+00 lowCoverage 0.851745 0.8291536 0.0356642 5 0.778703 0.841422 -0.06271911 8.6688e-02 1.1501e-01 insignificant 1.0000e+00 1.000000 insignificant 4.2433e-01 1.3339e-01 insignificant 1.0000e+00 1.000000 insignificant -0.06910173 1.1634e-02 lowCoverage 0.41548389 lowCoverage 0.862590 0.770718 0.0927679 6 0.738994 0.648809 0.0901858 7.3335e-03 8.9347e-01 weaklyHypermeth 9.4019e-02 1.0000e+00 weaklyHypermeth 2.6719e-01 4.7911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0516752 4.7959e-01 lowCoverage 1.0000e+00 lowCoverage 0.865258 0.8291536 0.0455071 5 0.803749 0.841422 -0.0376732 6.1209e-02 7.1195e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.6553e-01 0.61731413 insignificant 1.0000e+00 1.00000 insignificant -0.0486999 9.0347e-02 lowCoverage 1.0000000 lowCoverage 0.773611 0.8291536 -0.0739804 5 0.705781 0.841422 -0.1356406 0.9825810 1.6552e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8788899 3.7775e-01 insignificant 1 1.0000e+00 insignificant -0.100375 0.18627774 lowCoverage 1.000000 lowCoverage chr12 115580437 115581437 118124 MAP1LC3B2 ENSG00000171471 0.724615 362 9 0.601684 170 8 0.7271605 241 8 0.661895 328 9 0.736517 120 8 0.740694 531 9 0.694893 182 8 0.656271 222 8 0.734890 290 8 0.5877846 257 8 0.682741 219 8 0.686611 178 8 0.774366 268 8 0.555021 150 7 0.683336 272 8 0.4103175 109 8 0.6438853 75 6 0.387432 406 12 0.809279 128 8 0.727428 335 9 0.6452442 94 8 0.552740 201 8 0.7201689 216 8 0.584553 130 8 0.679982 150 8 0.8003019 260 8 0.668609 199 8 0.6861246 155 7 0.6340929 202 8 0.8097184 282 8 0.7390284 224 8 0.614378 390 9 0.109868 256 8 0.1071429 98 8 0.0917367 281 7 0.16667 45 3 0.135015 215 8 0.1054311 241 8 0.799463 334 9 0.530040 296 8 0.4704796 289 9 0.730061 248 8 0.5284406 329 11 0.637461 0.599499 0.727682 0.688052 0.689704 0.699620 0.676523 0.7391668 0.709405 0.6585182 0.6828184 0.672160 0.765503 0.598266 0.678244 0.4641423 0.6043460 0.478251 0.808197 0.6831360 0.621093 0.548264 0.724435 0.717767 0.676713 0.7344728 0.648408 0.74513052 0.6311823 0.750701 0.720309 0.636390 0.071606 0.059220 0.0534304 0.07245784 0.080970 0.074130 0.647685 0.5659932 0.502949 0.6454768 0.472382 8 0.671784 0.681618 -0.01197744 8 0.637857 0.652743 -0.0148866 8.7026e-01 0.62635943 insignificant 1.0000e+00 1.00000 insignificant 9.1844e-01 0.74762674 insignificant 1.0000000 1.00000 insignificant -1.6571e-02 0.6244211 insignificant 1 insignificant 0.672693 0.056338 0.6078497 8 0.679354 0.105060 0.5742947 1.7285e-72 1.0000e+00 hypermethylated 1.7285e-69 1.0000e+00 hypermethylated 9.4306e-19 1.0000e+00 hypermethylated 3.9727e-16 1.0000e+00 hypermethylated 0.5420310 1.6808e-16 hypermethylated 1.6808e-13 hypermethylated 0.671145 0.6038874 0.0958649 8 0.618163 0.581449 0.03671358 2.3518e-05 8.7177e-01 weaklyHypermeth 1.3065e-03 1.000000 weaklyHypermeth 7.6655e-03 9.8421e-01 weaklyHypermeth 2.7377e-01 1.000000 insignificant 0.04964420 5.0172e-01 insignificant 1.00000000 insignificant 0.682661 0.056338 0.6200340 8 0.691615 0.105060 0.5865552 2.2299e-50 1.0000e+00 hypermethylated 1.1150e-47 1.0000e+00 hypermethylated 4.5884e-16 1.0000e+00 hypermethylated 2.2942e-13 1.0000e+00 hypermethylated 0.5586016 8.9236e-13 hypermethylated 5.5546e-10 hypermethylated 0.681327 0.6052279 0.1119835 8 0.654732 0.652878 0.0018545 1.0623e-03 6.7416e-01 weaklyHypermeth 4.0535e-02 1.0000000 weaklyHypermeth 9.7408e-03 0.92250124 weaklyHypermeth 3.7465e-01 1.00000 insignificant 0.0662148 3.7648e-01 insignificant 1.0000000 insignificant 0.056338 0.6018006 -0.4957739 8 0.105060 0.593257 -0.4881977 1.0000000 2.8270e-32 hypomethylated 1.00000 2.8270e-29 hypomethylated 1.0000000 4.3174e-11 hypomethylated 1 2.1587e-08 hypomethylated -0.492387 0.00131186 weaklyHypometh 0.145763 insignificant chr12 115615074 115616074 118128 MAP1LC3B2 ENSG00000171471 0.228319 388 10 0.155977 578 10 0.2557716 364 10 0.121955 349 10 0.091415 259 10 0.310186 753 10 0.156694 375 10 0.308312 453 10 0.190352 470 10 0.2087871 373 10 0.291403 482 10 0.343179 165 10 0.128241 322 10 0.151411 266 10 0.167197 460 10 0.2633039 213 9 0.2023810 38 3 0.200879 384 10 0.194109 371 10 0.058558 635 10 0.1493876 195 9 0.114601 174 7 0.2235784 317 10 0.088650 221 9 0.312518 163 8 0.3347855 608 10 0.049231 387 10 0.1004464 231 10 0.0738849 310 10 0.1218277 781 10 0.0432083 698 10 0.202894 622 10 0.009390 417 10 0.0052168 274 10 0.0039099 303 7 0.00000 40 4 0.052834 467 10 0.0254079 551 10 0.109227 671 10 0.230487 535 10 0.0814904 389 10 0.245035 234 10 0.0819259 425 10 0.273474 0.180280 0.298207 0.157499 0.086525 0.369960 0.164755 0.3356628 0.210109 0.2131171 0.2335189 0.346685 0.126098 0.185813 0.187899 0.2890028 0.2254197 0.214967 0.218117 0.0739486 0.154812 0.128380 0.280047 0.081663 0.241187 0.2228247 0.059040 0.12400794 0.1113751 0.045357 0.063557 0.249701 0.007727 0.007229 0.0083884 0.00025975 0.036806 0.025411 0.108280 0.1604682 0.079840 0.2520206 0.103410 8 0.212346 0.132144 0.07949990 10 0.289991 0.145210 0.1447808 3.4019e-09 1.00000000 weaklyHypermeth 3.4019e-06 1.00000 weaklyHypermeth 7.0108e-06 1.00000000 weaklyHypermeth 0.0070108 1.00000 weaklyHypermeth 5.0170e-02 0.1437545 insignificant 1 insignificant 0.212346 0.019981 0.1933492 10 0.289991 0.034121 0.2558701 5.9181e-25 1.0000e+00 weaklyHypermeth 5.3801e-23 1.0000e+00 weaklyHypermeth 1.2125e-21 1.0000e+00 weaklyHypermeth 1.2125e-18 1.0000e+00 weaklyHypermeth 0.1852951 7.8751e-10 weaklyHypermeth 1.1250e-07 weaklyHypermeth 0.212271 0.1335404 0.0947528 10 0.270899 0.202214 0.06868499 7.6355e-05 9.9999e-01 weaklyHypermeth 4.0187e-03 1.000000 weaklyHypermeth 4.5723e-04 9.9983e-01 weaklyHypermeth 3.0846e-02 1.000000 weaklyHypermeth 0.05178832 2.4604e-01 insignificant 1.00000000 insignificant 0.132144 0.019981 0.1138479 10 0.145210 0.034121 0.1110893 2.7867e-09 1.0000e+00 weaklyHypermeth 1.0240e-07 1.0000e+00 weaklyHypermeth 3.6304e-11 1.0000e+00 weaklyHypermeth 6.0506e-09 1.0000e+00 weaklyHypermeth 0.1351246 5.1088e-04 weaklyHypermeth 2.3222e-02 weaklyHypermeth 0.132156 0.1335404 0.0137247 10 0.147047 0.202214 -0.0551668 7.3301e-01 2.8031e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.4009e-01 0.40577188 insignificant 1.0000e+00 1.00000 insignificant 0.0016178 9.7271e-01 insignificant 1.0000000 insignificant 0.019990 0.1335404 -0.1055358 10 0.037223 0.202214 -0.1649915 1.0000000 7.9712e-12 weaklyHypometh 1.00000 1.5942e-09 weaklyHypometh 1.0000000 2.8677e-11 weaklyHypometh 1 2.1587e-08 weaklyHypometh -0.133507 0.01971263 weaklyHypometh 0.563218 insignificant chr12 115620103 115621103 118129 MAP1LC3B2 ENSG00000171471 0.893217 327 8 0.846764 312 8 0.7887721 235 8 0.935799 209 8 0.898329 129 8 0.857126 390 8 0.941559 202 8 0.883887 230 8 0.895946 219 8 0.8227122 200 8 0.865609 377 8 0.668148 134 8 0.957609 255 8 0.909091 11 1 0.869240 192 8 0.8819444 59 6 0.8379453 478 8 0.882140 288 8 0.925141 178 7 0.935239 348 8 0.8637196 104 8 0.743717 124 8 0.9102953 255 8 0.893793 131 8 0.957143 74 6 0.8991509 309 8 0.882208 145 8 0.8943354 97 7 0.8645187 253 8 0.9102624 359 8 0.9232910 276 8 0.900477 490 8 0.725577 313 8 0.8049696 205 8 0.8214286 550 6 0.68576 58 7 0.791132 137 8 0.5632018 410 8 0.548915 320 8 0.698631 392 8 0.8235907 264 8 0.775809 268 8 0.8606359 259 8 0.889867 0.843696 0.775160 0.937587 0.883077 0.856741 0.937628 0.8893622 0.895451 0.9008917 0.8725083 0.841610 0.955576 NA 0.864771 0.8621674 0.8140187 0.875491 0.924963 0.9349554 0.868922 0.777204 0.912351 0.884156 0.957183 0.9068419 0.897605 0.88667569 0.8747344 0.916223 0.924671 0.901949 0.725139 0.794580 0.7758433 0.71208920 0.882155 0.564133 0.770923 0.8417679 0.825072 0.7852663 0.868498 8 0.817991 0.898357 -0.06158336 8 0.844499 0.888328 -0.0438293 5.2744e-01 0.00889339 weaklyHypometh 1.0000e+00 0.65346 insignificant 3.9209e-01 0.06353514 insignificant 1.0000000 1.00000 insignificant -1.2098e-02 0.5648570 insignificant 1 insignificant 0.817820 0.784818 0.0923287 8 0.750666 0.652880 0.0977858 2.7570e-03 9.9932e-01 weaklyHypermeth 3.6276e-02 1.0000e+00 weaklyHypermeth 3.6733e-02 7.9463e-01 weaklyHypermeth 5.1736e-01 1.0000e+00 insignificant 0.1427987 1.3654e-02 weaklyHypermeth 3.1031e-01 insignificant 0.817687 0.8262317 0.0103016 8 0.705090 0.635678 0.06941221 2.6293e-04 5.9053e-01 weaklyHypermeth 1.0955e-02 1.000000 weaklyHypermeth 7.1539e-04 7.5544e-01 weaklyHypermeth 4.2081e-02 1.000000 weaklyHypermeth 0.13329464 7.1836e-02 insignificant 1.00000000 insignificant 0.898357 0.785287 0.1589932 8 0.888328 0.734490 0.1538383 4.2412e-08 9.7257e-01 weaklyHypermeth 1.3681e-06 1.0000e+00 weaklyHypermeth 1.8066e-02 8.8910e-01 weaklyHypermeth 2.9617e-01 1.0000e+00 insignificant 0.1548972 9.4970e-03 weaklyHypermeth 2.5667e-01 insignificant 0.898357 0.8283233 0.0743263 8 0.888328 0.811557 0.0767711 1.3222e-04 9.0747e-01 weaklyHypermeth 6.2963e-03 1.0000000 weaklyHypermeth 2.1055e-03 0.96568049 weaklyHypermeth 1.0528e-01 1.00000 insignificant 0.1453931 5.6049e-02 insignificant 1.0000000 insignificant 0.785287 0.8283233 -0.0827012 8 0.734490 0.811557 -0.0770673 0.8357675 1.1063e-02 weaklyHypometh 1.00000 1.6269e-01 insignificant 0.4324889 4.6227e-01 insignificant 1 1.0000e+00 insignificant -0.009504 0.89260609 insignificant 1.000000 insignificant chr12 116490630 116491630 118164 NOS1 ENSG00000089250 0.904603 174 5 0.850331 132 5 0.4444444 47 5 0.964778 142 5 0.800000 5 0 0.869074 164 5 0.600000 5 0 0.885872 82 5 0.833333 42 5 0.9369963 44 5 0.883997 164 5 0.933333 17 0 0.957364 167 5 0.984848 60 5 0.914370 82 5 0.5000000 2 0 1.0000000 2 0 0.717184 230 5 0.905051 71 5 0.864207 101 5 0.9134454 52 5 0.720909 71 5 0.8284547 58 5 0.971429 50 5 0.948718 43 5 0.9472567 115 5 0.911842 64 5 0.7638889 23 3 0.7847367 123 5 0.9448718 134 5 0.9122222 111 5 0.928413 206 5 0.543740 126 5 0.8044444 47 2 0.5697347 222 5 0.25000 6 0 0.513853 73 5 0.6563492 147 5 0.895455 39 5 0.755556 82 5 0.8882784 87 5 0.789167 58 5 0.8623188 64 5 0.910520 0.835740 0.445863 0.969212 0.659574 0.885617 0.702128 0.9002813 0.790780 0.9344946 0.8821682 0.886525 0.950660 0.986460 0.889992 0.7303082 0.9430742 0.833441 0.871266 0.8754585 0.896370 0.693230 0.822191 0.951368 0.914894 0.9546441 0.890258 0.89007092 0.8021608 0.921768 0.894444 0.932965 0.530892 0.808983 0.4819872 0.41471072 0.503132 0.590898 0.856867 0.7723742 0.866067 0.7730496 0.814215 0 0.878823 0.885714 -0.00831012 5 0.773348 0.875060 -0.1017119 9.6636e-01 0.56836195 insignificant 1.0000e+00 1.00000 insignificant 8.0486e-01 0.73852969 insignificant 1.0000000 1.00000 insignificant -4.3859e-02 0.3095143 lowCoverage 1 lowCoverage 0.879191 0.568438 0.2902129 5 0.882687 0.605922 0.2767642 1.8341e-10 1.0000e+00 hypermethylated 5.7315e-09 1.0000e+00 hypermethylated 3.5887e-05 9.9998e-01 hypermethylated 1.2817e-03 1.0000e+00 hypermethylated 0.2811360 1.0556e-02 lowCoverage 2.5133e-01 lowCoverage 0.879191 0.8030303 0.0681782 5 0.882687 0.840265 0.04242168 5.4266e-02 7.7415e-01 insignificant 1.0000e+00 1.000000 insignificant 8.5083e-02 6.4803e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00066534 9.8827e-01 lowCoverage 1.00000000 lowCoverage 0.886233 0.568438 0.3049086 5 0.891750 0.605922 0.2858275 1.5747e-08 1.0000e+00 hypermethylated 5.4301e-07 1.0000e+00 hypermethylated 5.5413e-06 9.9997e-01 hypermethylated 2.9165e-04 1.0000e+00 hypermethylated 0.3249954 5.9322e-03 lowCoverage 1.7448e-01 lowCoverage 0.886233 0.8030303 0.0740482 5 0.891750 0.840265 0.0514850 5.7665e-02 8.1404e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4530e-02 0.80102827 insignificant 1.0000e+00 1.00000 insignificant 0.0431941 2.6970e-01 lowCoverage 1.0000000 lowCoverage 0.568438 0.8030303 -0.2514947 5 0.605922 0.840265 -0.2343425 0.9966154 1.5932e-03 weaklyHypometh 1.00000 3.3191e-02 weaklyHypometh 0.9976774 3.0138e-03 weaklyHypometh 1 9.1328e-02 weaklyHypometh -0.281801 0.01126100 lowCoverage 0.417074 lowCoverage chr12 118996198 118997198 118281 ENSG00000209219 0.755794 338 9 0.727896 232 7 0.6624973 144 9 0.769135 243 7 0.730159 81 7 0.716562 413 9 0.677778 83 7 0.729432 205 9 0.684226 127 9 0.8095238 77 7 0.609494 303 9 0.571429 48 3 0.784818 158 9 0.619898 43 5 0.719941 120 7 0.6512346 46 3 0.6320061 500 5 0.804013 294 9 0.715567 272 7 0.643974 372 9 0.6026154 74 4 0.742912 101 6 0.7391672 156 9 0.743164 94 7 0.798579 244 7 0.7257076 233 9 0.664396 100 7 0.7944643 67 7 0.8480392 184 7 0.7868645 191 9 0.6671368 231 9 0.777827 398 9 0.685882 188 8 0.5823269 170 7 0.5446716 224 9 0.49102 77 3 0.765514 102 7 0.6757512 231 7 0.780164 242 9 0.793477 244 9 0.7737937 385 9 0.742351 254 9 0.8120451 227 9 0.826681 0.827549 0.773544 0.871359 0.872759 0.839426 0.772123 0.8161479 0.843171 0.8756121 0.7929781 0.740891 0.886837 0.766128 0.819045 0.7585346 0.7731820 0.880554 0.823692 0.8472892 0.760931 0.777822 0.852255 0.900080 0.892083 0.9091365 0.771070 0.89542366 0.8674121 0.853844 0.845386 0.842658 0.754841 0.690916 0.7293781 0.64837093 0.861135 0.803425 0.895175 0.8839678 0.890560 0.8516710 0.906555 4 0.825567 0.830198 -0.01937765 7 0.683989 0.714935 -0.0309459 9.3144e-01 0.00275097 weaklyHypometh 1.0000e+00 0.39300 insignificant 9.6896e-01 0.01312303 weaklyHypometh 1.0000000 1.00000 insignificant -4.0137e-02 0.1194891 insignificant 1 insignificant 0.825684 0.758065 0.0591966 7 0.685564 0.635775 0.0497893 3.1202e-06 9.6739e-01 weaklyHypermeth 5.6730e-05 1.0000e+00 weaklyHypermeth 1.2284e-01 9.6564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0765745 1.3218e-01 insignificant 1.0000e+00 insignificant 0.826119 0.8557692 -0.0444336 9 0.696978 0.800977 -0.10399932 9.9985e-01 7.0535e-05 weaklyHypometh 1.0000e+00 0.070535 weaklyHypometh 9.9996e-01 2.2315e-04 weaklyHypometh 1.0000e+00 0.103719 insignificant -0.07959753 5.1875e-04 weaklyHypometh 0.06484405 weaklyHypometh 0.830754 0.758065 0.0776840 7 0.725384 0.635775 0.0896091 1.7821e-05 9.9613e-01 weaklyHypermeth 3.6370e-04 1.0000e+00 weaklyHypermeth 2.6873e-02 9.9965e-01 weaklyHypermeth 4.1989e-01 1.0000e+00 insignificant 0.1167117 3.7955e-02 weaklyHypermeth 6.9010e-01 insignificant 0.830344 0.8557692 -0.0322573 7 0.697922 0.800977 -0.1030547 9.9473e-01 1.2213e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9249e-01 0.07285985 insignificant 1.0000e+00 1.00000 insignificant -0.0394603 1.0581e-01 insignificant 1.0000000 insignificant 0.757820 0.8557692 -0.1048505 7 0.599352 0.800977 -0.2016247 0.9982519 3.9453e-06 weaklyHypometh 1.00000 2.0765e-04 weaklyHypometh 0.9993338 8.2629e-04 weaklyHypometh 1 3.9347e-02 weaklyHypometh -0.156172 0.01212205 weaklyHypometh 0.432930 insignificant chr12 119289347 119290347 118293 PLA2G1B ENSG00000170890 0.000000 35 3 0.458333 79 3 0.0105820 110 5 0.000000 72 5 0.000000 132 5 0.207826 85 3 0.034900 90 5 0.019397 64 3 0.000000 67 5 0.1428571 68 3 0.054428 112 5 0.025000 72 5 0.250000 43 3 0.000000 38 2 0.071429 64 3 0.0166667 46 3 1.0000000 1 0 0.175926 58 5 0.111111 36 3 0.269737 85 5 0.0071429 71 5 0.020000 36 3 0.1733333 57 3 0.000000 62 5 0.018541 110 3 0.1739130 97 5 0.156617 127 5 0.1428571 51 3 0.0613636 28 3 0.0109355 131 5 0.1790043 86 3 0.013889 71 3 0.166667 52 5 0.0000000 71 5 0.0000000 185 5 0.00000 12 0 0.058333 64 3 0.1447368 93 5 0.083333 102 5 0.008000 99 5 0.0000000 61 5 0.000000 14 2 0.0061728 108 5 0.000000 0.010854 0.033613 0.000000 0.000000 0.079123 0.077996 0.0310417 0.000000 0.0000000 0.0916657 0.044118 0.000000 0.000000 0.000000 0.0294118 NA 0.019608 0.000000 0.0557276 0.021609 0.035294 0.131933 0.000000 0.026117 0.0153453 0.032195 0.00095493 0.0924370 0.029165 0.023486 0.056022 0.000000 0.000000 0.0000000 0.00521008 0.026050 0.111455 0.000000 0.0104202 0.000000 0.0026050 0.013072 3 0.036649 0.034520 0.00156085 3 0.143115 0.069646 0.0734691 7.9175e-01 0.84808977 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.1470e-01 0.73957415 lowCoverage 1.0000000 1.00000 lowCoverage 6.2610e-02 0.2847302 lowCoverage 1 lowCoverage 0.034875 0.025157 0.0113824 3 0.152753 0.055764 0.0969889 3.1858e-01 9.5314e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.1772e-01 9.9852e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0807868 2.0034e-01 lowCoverage 1.0000e+00 lowCoverage 0.031783 0.0078125 0.0259218 3 0.143271 0.045667 0.09760446 1.3595e-01 9.9930e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.3288e-01 9.9968e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.12290838 3.6425e-02 lowCoverage 1.00000000 lowCoverage 0.033880 0.025157 0.0113687 3 0.078377 0.055764 0.0226129 2.9461e-01 9.7033e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.2856e-01 9.9800e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0181769 6.4611e-01 lowCoverage 1.0000e+00 lowCoverage 0.033223 0.0078125 0.0260841 3 0.084233 0.045667 0.0385658 6.2579e-02 9.8961e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.7372e-02 0.99854958 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0602985 4.4855e-02 lowCoverage 1.0000000 lowCoverage 0.025478 0.0078125 0.0162881 5 0.083647 0.045667 0.0379797 0.8238537 8.7619e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7582924 9.5892e-01 insignificant 1 1.0000e+00 insignificant 0.042122 0.26801922 lowCoverage 1.000000 lowCoverage chr12 119335950 119336950 118296 MSI1 ENSG00000135097 0.220305 209 11 0.208017 267 11 0.2413941 285 11 0.196017 222 9 0.177406 221 8 0.326896 314 11 0.087884 345 11 0.195453 278 11 0.105958 330 8 0.1742329 382 8 0.221096 312 11 0.124231 328 8 0.157599 344 8 0.022251 144 5 0.187180 466 8 0.1807547 310 8 0.0293941 257 8 0.256503 188 8 0.241013 169 11 0.132787 207 8 0.2730186 107 7 0.253571 154 5 0.1771694 123 8 0.203086 217 8 0.214719 180 5 0.1589899 392 11 0.203568 252 8 0.0076923 110 7 0.1501984 180 8 0.1799938 360 11 0.1579583 233 11 0.145455 238 11 0.270706 243 11 0.3259825 170 11 0.3939475 213 9 0.32523 71 5 0.440138 113 6 0.2662050 190 10 0.323015 172 8 0.207197 215 10 0.2713092 121 8 0.309331 143 7 0.2168803 172 8 0.064387 0.037698 0.091647 0.070248 0.063584 0.123854 0.032912 0.0786936 0.047414 0.0640649 0.0726101 0.066359 0.042185 0.063481 0.051468 0.0957493 0.0469492 0.102488 0.112086 0.0480525 0.059717 0.054346 0.066875 0.079204 0.057447 0.0424678 0.066731 0.06664553 0.0433995 0.060148 0.045725 0.062870 0.238491 0.155391 0.2489674 0.22391800 0.272061 0.220536 0.084204 0.0615983 0.073715 0.1524677 0.086921 5 0.069200 0.058916 0.01439752 8 0.204805 0.184023 0.0207823 1.0196e-02 0.99943091 weaklyHypermeth 1.0000e+00 1.00000 insignificant 2.5300e-03 0.99271364 weaklyHypermeth 1.0000000 1.00000 insignificant -2.7997e-03 0.9134707 insignificant 1 insignificant 0.069200 0.290000 -0.1847892 11 0.204805 0.291217 -0.0864111 9.0856e-01 4.7436e-22 weaklyHypometh 1.0000e+00 4.7436e-19 weaklyHypometh 9.9330e-01 1.4678e-09 weaklyHypometh 1.0000e+00 1.4678e-06 weaklyHypometh -0.1627155 7.7750e-04 weaklyHypometh 3.1100e-02 weaklyHypometh 0.069200 0.1458080 -0.0149245 8 0.204805 0.294740 -0.08993508 7.3719e-01 2.2982e-03 weaklyHypometh 1.0000e+00 0.383038 insignificant 8.3900e-01 1.1839e-01 insignificant 1.0000e+00 1.000000 insignificant -0.09122802 1.2097e-02 weaklyHypometh 0.41715407 insignificant 0.058916 0.290000 -0.2042976 8 0.184023 0.291217 -0.1071934 9.6075e-01 9.8305e-16 hypomethylated 1.0000e+00 9.8305e-13 hypomethylated 9.9002e-01 2.1627e-10 hypomethylated 1.0000e+00 2.1627e-07 hypomethylated -0.1599158 8.7351e-04 weaklyHypometh 3.7979e-02 weaklyHypometh 0.058916 0.1458080 -0.0316035 5 0.184023 0.294740 -0.1107174 9.7101e-01 7.1447e-06 weaklyHypometh 1.0000e+00 0.0071447 weaklyHypometh 9.8775e-01 0.00666999 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0884283 1.6142e-02 weaklyHypometh 0.5978633 insignificant 0.290000 0.1458080 0.1335647 8 0.291217 0.294740 -0.0035239 0.0016464 8.2825e-01 weaklyHypermeth 0.32928 1.0000e+00 insignificant 0.0068236 8.4996e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.071487 0.08234833 insignificant 1.000000 insignificant chr12 119827842 119828842 118313 ENSG00000157837 0.686333 181 6 0.600198 84 6 0.5555556 28 4 0.579979 150 6 0.803571 35 4 0.803333 128 6 0.670068 36 6 0.824695 92 6 0.636364 52 4 0.9000000 24 4 0.835670 143 6 0.625000 8 0 0.861111 28 2 0.692857 37 6 0.785714 21 0 NA 0 0 0.2500000 4 0 0.626625 222 2 0.900000 51 6 0.748916 106 6 0.8555556 32 5 1.000000 2 0 0.7642857 44 3 0.500000 18 0 0.678438 95 6 0.6618590 91 6 0.625000 49 6 0.2833333 17 2 0.8625850 49 6 0.8125000 76 6 0.6598639 89 6 0.750694 161 6 0.792484 58 6 0.8174603 74 6 0.7440476 83 4 0.25000 4 0 0.796296 72 6 0.7751792 109 6 0.737875 95 6 0.766768 114 6 0.7085836 124 6 0.905556 71 2 0.8248196 107 6 0.633095 0.595805 0.595238 0.592840 0.732143 0.767687 0.717687 0.7910998 0.567100 0.8761905 0.7684737 0.666502 0.865079 0.653061 0.904762 NA 0.3569782 0.676950 0.876190 0.7095432 0.825397 0.676066 0.702381 0.412698 0.597153 0.6094861 0.783069 0.26190476 0.8219955 0.778061 0.744898 0.706151 0.784314 0.786281 0.6758503 0.36652553 0.783069 0.722350 0.672292 0.7054297 0.654635 0.9246032 0.782808 0 0.815385 0.771468 -0.00192722 6 0.684282 0.708344 -0.0240626 7.7125e-01 0.50968992 insignificant 1.0000e+00 1.00000 insignificant 5.9508e-01 0.75485189 insignificant 1.0000000 1.00000 insignificant 1.6210e-05 0.9998021 lowCoverage 1 lowCoverage 0.817990 0.787500 -0.0130271 6 0.750710 0.760663 -0.0099536 8.4503e-01 5.1389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3955e-01 4.5531e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0086146 9.3154e-01 lowCoverage 1.0000e+00 lowCoverage 0.817990 0.8512720 -0.0229519 6 0.750710 0.764730 -0.01401998 8.1945e-01 1.8723e-01 insignificant 1.0000e+00 1.000000 insignificant 7.5989e-01 6.4159e-01 insignificant 1.0000e+00 1.000000 insignificant -0.08419455 1.1484e-01 lowCoverage 1.00000000 lowCoverage 0.772981 0.787500 -0.0134810 6 0.743069 0.760663 -0.0175949 7.8220e-01 5.4642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9060e-01 3.3591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0085984 9.3637e-01 lowCoverage 1.0000e+00 lowCoverage 0.772981 0.8512720 -0.0190876 6 0.743069 0.764730 -0.0216612 8.3209e-01 4.1490e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.0599e-01 0.38616226 insignificant 1.0000e+00 1.00000 insignificant -0.0842108 2.0935e-01 lowCoverage 1.0000000 lowCoverage 0.787500 0.8512720 -0.0052124 6 0.760663 0.764730 -0.0040663 0.7133556 3.2940e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4501104 2.7873e-01 insignificant 1 1.0000e+00 insignificant -0.092809 0.36997069 lowCoverage 1.000000 lowCoverage chr12 120879791 120880791 118326 WDR66 ENSG00000158023 0.747421 243 6 0.622020 96 6 0.6324176 93 6 0.755267 112 6 0.780808 59 4 0.772443 313 6 0.670899 118 5 0.733712 106 6 0.720971 104 6 0.7063751 101 6 0.747418 210 6 0.525910 71 5 0.776971 133 6 0.694444 19 2 0.777194 93 6 0.4340067 44 5 0.5575980 79 5 0.818180 140 6 0.686836 158 6 0.691789 174 6 0.5809524 38 5 0.712179 47 6 0.6986793 143 6 0.719081 82 6 0.740741 52 4 0.6913284 151 6 0.712291 74 6 0.6333333 30 4 0.7118326 110 6 0.7041326 156 6 0.7253830 148 6 0.694327 277 6 0.684557 106 6 0.5593964 93 6 0.6309477 146 6 0.69921 54 5 0.720370 54 4 0.6930298 172 6 0.751914 192 6 0.800091 205 6 0.7484216 155 6 0.711239 160 6 0.7284697 166 6 0.795021 0.644934 0.661533 0.802070 0.812983 0.809189 0.722964 0.7606989 0.767992 0.7404587 0.7771568 0.618802 0.819490 0.727348 0.806991 0.5019741 0.6356002 0.843742 0.732682 0.7460544 0.653807 0.751395 0.741381 0.772525 0.767202 0.7265843 0.731951 0.66091371 0.7628431 0.742634 0.769926 0.744511 0.728829 0.580937 0.6657959 0.67452260 0.792217 0.735330 0.785344 0.8306427 0.792795 0.7595603 0.777201 4 0.751825 0.736239 0.01854984 6 0.721738 0.701397 0.0203408 1.1026e-01 0.94730975 insignificant 1.0000e+00 1.00000 insignificant 2.3604e-01 0.82891929 insignificant 1.0000000 1.00000 insignificant -1.0543e-03 0.9668525 insignificant 1 insignificant 0.751825 0.680000 0.0785212 6 0.721738 0.647385 0.0743530 1.1419e-04 9.9839e-01 weaklyHypermeth 1.7302e-03 1.0000e+00 weaklyHypermeth 2.1553e-02 9.5635e-01 weaklyHypermeth 3.1907e-01 1.0000e+00 insignificant 0.0280495 4.0386e-01 insignificant 1.0000e+00 insignificant 0.751825 0.7824601 -0.0350288 6 0.721738 0.755730 -0.03399234 9.4253e-01 1.5031e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7736e-01 4.5132e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.05539315 4.8327e-02 weaklyHypometh 1.00000000 insignificant 0.736239 0.680000 0.0605506 6 0.701397 0.647385 0.0540122 2.5844e-03 9.9147e-01 weaklyHypermeth 3.6400e-02 1.0000e+00 weaklyHypermeth 1.1608e-01 9.1244e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0291038 3.2023e-01 insignificant 1.0000e+00 insignificant 0.736239 0.7824601 -0.0508966 6 0.701397 0.755730 -0.0543331 9.9585e-01 1.2638e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.8864e-01 0.03661589 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0543388 1.9812e-02 weaklyHypometh 0.6391029 insignificant 0.680000 0.7824601 -0.1101447 6 0.647385 0.755730 -0.1083453 0.9998803 9.1246e-04 weaklyHypometh 1.00000 2.0277e-02 weaklyHypometh 0.9956890 5.0171e-02 insignificant 1 7.1673e-01 insignificant -0.083443 0.01899167 weaklyHypometh 0.558578 insignificant chr12 120973224 120974224 118328 BCL7A ENSG00000110987 0.913049 107 6 0.937426 107 4 0.8625000 70 4 0.967143 155 6 1.000000 21 1 0.922716 174 6 0.793750 39 4 0.904269 88 4 0.818768 63 4 0.8899642 60 4 0.967105 88 4 0.934722 47 4 0.929645 79 4 0.816092 47 4 0.930247 104 4 1.0000000 7 0 0.2666667 7 1 0.772973 114 6 0.964015 73 3 0.927844 69 5 0.9285714 30 4 0.938424 50 4 0.9461382 72 4 0.700595 43 4 0.776471 31 3 0.9365437 116 6 1.000000 47 2 0.9666667 57 4 0.8367816 74 4 0.9310786 168 6 0.9515074 117 6 0.907939 145 6 0.647070 80 4 0.9852941 20 1 0.5320000 58 1 0.68736 132 4 0.757395 57 4 0.7883297 168 6 0.965463 84 4 0.951122 96 4 0.9456103 115 4 0.980344 73 5 0.9419069 125 4 0.896849 0.963985 0.717647 0.976444 1.000000 0.935221 0.807353 0.8802596 0.842298 0.8775459 0.9349845 0.874510 0.909193 0.872887 0.945352 1.0000000 0.8289861 0.779650 0.911765 0.9174370 0.949580 0.901768 0.933644 0.842017 0.686505 0.9176141 1.000000 0.99215686 0.8822853 0.913636 0.901099 0.881560 0.505753 0.958478 0.7486950 0.43529412 0.843222 0.837848 0.956783 0.9558824 0.955182 0.9809221 0.963054 1 0.903162 0.911486 -0.00798580 5 0.913546 0.916956 -0.0034107 8.3228e-01 0.59686408 insignificant 1.0000e+00 1.00000 insignificant 9.3918e-01 0.36811893 insignificant 1.0000000 1.00000 insignificant -2.5782e-02 0.5552724 lowCoverage 1 lowCoverage 0.903162 0.686770 0.1829906 5 0.913546 0.702193 0.2113530 1.2647e-07 9.9984e-01 weaklyHypermeth 2.6907e-06 1.0000e+00 weaklyHypermeth 1.6629e-01 9.7214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1430359 7.9349e-02 lowCoverage 1.0000e+00 lowCoverage 0.903162 0.9391481 -0.0465032 3 0.913546 0.953306 -0.03976023 9.3099e-01 1.0540e-02 lowCoverage 1.0000e+00 0.878303 lowCoverage 9.7819e-01 5.2508e-03 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.08094445 3.5362e-02 lowCoverage 1.00000000 lowCoverage 0.911579 0.685437 0.2006309 6 0.928820 0.601880 0.3269403 2.7573e-05 1.0000e+00 hypermethylated 5.4064e-04 1.0000e+00 hypermethylated 1.4763e-01 9.9576e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1688175 4.2244e-02 lowCoverage 7.2834e-01 lowCoverage 0.911486 0.9391481 -0.0381516 4 0.916956 0.953306 -0.0363496 8.9747e-01 5.4660e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.8027e-01 0.02574472 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0551629 5.4625e-02 lowCoverage 1.0000000 lowCoverage 0.686770 0.9391481 -0.2686402 4 0.702193 0.953306 -0.2511132 0.9999999 7.6197e-06 lowCoverage 1.00000 3.4635e-04 lowCoverage 0.9999954 2.1984e-03 lowCoverage 1 7.8513e-02 lowCoverage -0.223980 0.01551775 lowCoverage 0.500572 lowCoverage chr12 122128188 122129188 118343 ARL6IP4 ENSG00000182196 0.847485 303 12 0.815289 191 12 0.7690586 234 13 0.912655 270 8 0.720454 109 5 0.716558 356 13 0.680931 159 10 0.866231 250 10 0.890691 144 10 0.9122768 205 13 0.915943 361 13 0.785348 112 7 0.668817 236 10 0.893522 163 8 0.862413 248 10 0.8750000 57 8 0.9777778 31 2 0.708643 353 12 0.857153 293 13 0.847992 255 10 0.7418520 176 10 0.633207 121 10 0.7357234 208 7 0.728549 123 9 0.725955 172 9 0.8105920 311 13 0.820322 247 13 0.6309290 110 11 0.8723288 183 8 0.8893993 343 13 0.8242485 217 11 0.888182 286 13 0.932193 224 14 0.9706123 297 13 0.7996575 296 11 0.66685 55 5 0.692201 113 9 0.7006727 379 13 0.554938 194 9 0.698808 209 9 0.8298951 226 9 0.824706 285 10 0.6552855 186 10 0.808585 0.843920 0.749664 0.898058 0.786276 0.838290 0.731761 0.9032449 0.843754 0.9070165 0.9013702 0.762349 0.823217 0.904228 0.882579 0.9045245 0.9513860 0.847301 0.883115 0.8386055 0.881291 0.777968 0.849281 0.880831 0.805388 0.8519697 0.788167 0.80487517 0.8152780 0.880216 0.846454 0.916721 0.877442 0.955043 0.7872087 0.71797073 0.887479 0.732320 0.649545 0.8276497 0.821910 0.7891568 0.742197 6 0.851698 0.838153 0.01305922 10 0.799419 0.629360 0.1700588 7.3245e-01 0.98742635 insignificant 1.0000e+00 1.00000 insignificant 3.9392e-01 0.99436964 insignificant 1.0000000 1.00000 insignificant 5.1105e-02 0.1317908 insignificant 1 insignificant 0.851826 0.832599 0.0395303 10 0.804126 0.667945 0.1361810 3.4133e-01 4.0990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5531e-01 3.7932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0325141 5.8755e-01 insignificant 1.0000e+00 insignificant 0.852230 0.7600000 0.0901709 7 0.835864 0.730556 0.10530803 3.3188e-06 9.5773e-01 weaklyHypermeth 2.3706e-04 1.000000 weaklyHypermeth 4.9354e-04 9.5156e-01 weaklyHypermeth 3.0846e-02 1.000000 weaklyHypermeth 0.11348526 9.5857e-02 insignificant 1.00000000 insignificant 0.838813 0.832845 0.0056633 13 0.672839 0.696819 -0.0239804 9.9422e-01 2.0157e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9994e-01 3.2487e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0185906 7.6285e-01 insignificant 1.0000e+00 insignificant 0.841977 0.7600000 0.0784143 10 0.771183 0.730556 0.0406271 1.2495e-03 9.3944e-01 weaklyHypermeth 4.4626e-02 1.0000000 weaklyHypermeth 2.0684e-03 0.84635547 weaklyHypermeth 1.0528e-01 1.00000 insignificant 0.0623806 3.2584e-01 insignificant 1.0000000 insignificant 0.834711 0.7600000 0.0513208 10 0.733969 0.730556 0.0034134 0.0241674 9.8032e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0243406 9.9451e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.080971 0.30698971 insignificant 1.000000 insignificant chr12 123805401 123806401 118364 NCOR2 ENSG00000196498 0.647636 230 6 0.585120 187 6 0.6198775 142 6 0.648169 177 6 0.459695 45 5 0.829155 303 6 0.668013 91 6 0.725942 132 6 0.785596 78 6 0.7410875 72 5 0.776123 222 6 0.712302 43 6 0.353492 218 6 NA 0 0 0.597090 83 6 0.7500000 13 1 0.7172619 60 6 0.492944 182 6 0.709513 145 6 0.616197 212 6 0.8731770 125 6 0.265895 106 6 0.7254529 120 6 0.796037 101 6 0.738693 64 5 0.6087716 155 6 0.593307 102 6 0.5930556 37 4 0.6679845 141 6 0.6539702 229 6 0.5686748 211 6 0.768710 302 6 0.227435 199 6 0.2216490 163 6 0.1418440 105 3 0.12115 83 5 0.294020 92 6 0.0653982 264 6 0.364221 210 6 0.623654 196 6 0.5062394 173 6 0.489791 207 6 0.4718985 207 6 0.656366 0.611599 0.646487 0.677221 0.487821 0.836017 0.667943 0.7046561 0.792514 0.7547101 0.7915673 0.762180 0.368817 NA 0.614352 0.6989433 0.6960979 0.501242 0.723312 0.6379827 0.886050 0.284011 0.736800 0.794953 0.701769 0.6247739 0.611108 0.64456019 0.6865024 0.673901 0.585911 0.774943 0.209982 0.194838 0.2641855 0.11670228 0.268918 0.064929 0.373405 0.6537741 0.530602 0.5019029 0.495106 6 0.659203 0.675724 -0.02150931 6 0.649911 0.668721 -0.0188101 7.9372e-01 0.43738971 insignificant 1.0000e+00 1.00000 insignificant 5.7692e-01 0.45070896 insignificant 1.0000000 1.00000 insignificant 7.5571e-06 0.9998863 insignificant 1 insignificant 0.659203 0.143488 0.5097180 6 0.649911 0.170950 0.4789609 1.9112e-26 1.0000e+00 hypermethylated 2.1235e-24 1.0000e+00 hypermethylated 1.9317e-12 1.0000e+00 hypermethylated 3.2195e-10 1.0000e+00 hypermethylated 0.4759016 1.2789e-07 hypermethylated 1.1626e-05 hypermethylated 0.659203 0.5055388 0.1638496 6 0.649911 0.493312 0.15659924 2.3089e-05 9.6507e-01 weaklyHypermeth 1.3065e-03 1.000000 weaklyHypermeth 2.0541e-04 9.9057e-01 weaklyHypermeth 1.7118e-02 1.000000 weaklyHypermeth 0.16332425 1.1148e-02 weaklyHypermeth 0.41548389 insignificant 0.675724 0.143488 0.5327348 6 0.668721 0.170950 0.4977710 4.6936e-21 1.0000e+00 hypermethylated 4.2669e-19 1.0000e+00 hypermethylated 3.9920e-10 1.0000e+00 hypermethylated 4.4355e-08 1.0000e+00 hypermethylated 0.4758940 2.8885e-07 hypermethylated 5.6252e-05 hypermethylated 0.675724 0.5055388 0.1921407 6 0.668721 0.493312 0.1754093 7.6786e-05 8.9747e-01 weaklyHypermeth 4.2659e-03 1.0000000 weaklyHypermeth 5.3843e-04 0.84486335 weaklyHypermeth 4.4869e-02 1.00000 weaklyHypermeth 0.1633167 1.9154e-02 weaklyHypermeth 0.6384523 insignificant 0.143488 0.5055388 -0.3504223 6 0.170950 0.493312 -0.3223616 1.0000000 1.1729e-09 hypomethylated 1.00000 1.1729e-07 hypomethylated 1.0000000 7.0807e-07 hypomethylated 1 1.7466e-04 hypomethylated -0.312577 0.00035187 hypomethylated 0.050267 hypomethylated chr12 128293756 128294756 118397 ENSG00000208940 0.714729 196 7 0.748971 120 7 0.5581890 71 7 0.801117 138 7 0.765461 54 5 0.710698 232 7 0.701996 74 7 0.639009 70 5 0.512338 51 4 0.7269635 56 5 0.803456 225 7 0.515179 52 4 0.801374 78 6 0.768421 50 2 0.804203 82 7 0.5759556 61 4 0.7079365 24 3 0.813806 185 7 0.811091 104 4 0.779650 182 7 0.8809524 26 2 0.727381 60 6 0.7939595 128 7 0.863393 47 4 0.860544 49 6 0.6307258 135 7 0.731993 68 4 0.7141414 47 2 0.7602137 88 6 0.6587826 135 7 0.7387847 96 7 0.781636 240 7 0.644296 79 5 0.6837054 92 7 0.5638115 145 7 0.67045 35 3 0.647534 58 4 0.8051847 157 7 0.871537 173 7 0.787645 170 7 0.7465845 172 7 0.770143 176 7 0.8455269 192 7 0.820994 0.715355 0.664544 0.851171 0.791800 0.859509 0.757311 0.7543381 0.644921 0.7562530 0.8255873 0.780148 0.805995 0.850203 0.820280 0.7533973 0.8049383 0.854906 0.843440 0.8740406 0.859067 0.704990 0.816536 0.903600 0.862169 0.7417557 0.773965 0.84493079 0.8008725 0.774961 0.755557 0.784163 0.759615 0.714855 0.7323558 0.65888047 0.673225 0.753267 0.872925 0.8255356 0.818891 0.8076800 0.883897 2 0.789549 0.763181 0.02238010 7 0.694756 0.691680 0.0030756 2.6595e-01 0.81179340 insignificant 1.0000e+00 1.00000 insignificant 9.3344e-01 0.69277219 insignificant 1.0000000 1.00000 insignificant -4.8848e-02 0.1377914 insignificant 1 insignificant 0.789549 0.706714 0.0723608 7 0.694756 0.713188 -0.0184323 2.7009e-02 9.9492e-01 weaklyHypermeth 3.0347e-01 1.0000e+00 insignificant 1.0566e-01 9.9759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0438628 2.8783e-01 insignificant 1.0000e+00 insignificant 0.789349 0.8459796 -0.0365603 7 0.667006 0.784760 -0.11775406 9.6265e-01 5.4741e-02 insignificant 1.0000e+00 1.000000 insignificant 9.8218e-01 4.6333e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.09126017 1.5193e-02 weaklyHypometh 0.50643273 insignificant 0.763181 0.706714 0.0496269 7 0.691680 0.713188 -0.0215079 2.4931e-01 9.7335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8587e-01 9.9936e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0927112 3.9896e-02 weaklyHypermeth 7.1243e-01 insignificant 0.763489 0.8459796 -0.0561934 7 0.689625 0.784760 -0.0951353 9.8993e-01 1.9519e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.8185e-01 0.42757957 insignificant 1.0000e+00 1.00000 insignificant -0.0424117 2.1994e-01 insignificant 1.0000000 insignificant 0.706195 0.8459796 -0.1066800 7 0.687114 0.784760 -0.0976461 0.9999964 2.5720e-04 weaklyHypometh 1.00000 6.7684e-03 weaklyHypometh 0.9999998 3.5407e-03 weaklyHypometh 1 1.0414e-01 insignificant -0.135123 0.00831379 weaklyHypometh 0.340252 insignificant chr12 129155086 129156086 118411 ENSG00000214039 0.507265 743 9 0.369319 693 10 0.4803139 391 10 0.320860 722 9 0.383386 224 11 0.506746 837 10 0.461989 354 11 0.383825 407 10 0.362293 430 10 0.4129181 304 9 0.484217 492 11 0.400617 179 9 0.180273 505 11 0.439723 223 7 0.347146 408 10 0.3745652 93 6 0.0971484 1539 7 0.236950 1002 9 0.439728 495 9 0.389389 694 10 0.6253642 201 9 0.198009 310 9 0.4466973 400 9 0.404077 266 11 0.375599 408 10 0.3643789 701 10 0.369280 354 10 0.3320224 184 10 0.4171417 574 10 0.3222216 901 10 0.4828574 748 10 0.878369 583 10 0.041449 649 10 0.0171923 305 10 0.1111111 240 6 0.00000 113 3 0.018634 648 11 0.0174055 709 10 0.092067 963 9 0.064175 743 10 0.0413133 1045 9 0.053595 969 9 0.1541844 674 9 0.514302 0.476046 0.540901 0.339834 0.401611 0.561164 0.533059 0.4667693 0.410557 0.5363870 0.5403871 0.516060 0.167566 0.469883 0.339164 0.3722687 0.1380415 0.271413 0.451026 0.3155353 0.619360 0.107223 0.466868 0.477246 0.383572 0.3499718 0.372458 0.47601899 0.4093071 0.276332 0.513980 0.806780 0.027505 0.015293 0.0403554 0.00000000 0.027931 0.017769 0.115341 0.0672632 0.057456 0.0676476 0.082544 9 0.365042 0.440853 -0.04778255 10 0.320709 0.411998 -0.0912893 9.9953e-01 0.00567733 weaklyHypometh 1.0000e+00 0.56773 insignificant 9.8902e-01 0.44554168 insignificant 1.0000000 1.00000 insignificant -5.5734e-02 0.3281877 insignificant 1 insignificant 0.364992 0.021772 0.3809785 10 0.293125 0.015838 0.2772875 8.7136e-36 1.0000e+00 hypermethylated 1.0892e-33 1.0000e+00 hypermethylated 1.1918e-18 1.0000e+00 hypermethylated 3.9727e-16 1.0000e+00 hypermethylated 0.3446348 3.4384e-11 hypermethylated 1.1461e-08 hypermethylated 0.367240 0.1062813 0.3104688 9 0.373371 0.071231 0.30213946 4.3730e-26 1.0000e+00 hypermethylated 1.4577e-23 1.000000 hypermethylated 8.9710e-19 1.0000e+00 hypermethylated 8.9710e-16 1.000000 hypermethylated 0.29786662 4.3340e-08 hypermethylated 0.00004334 hypermethylated 0.440910 0.021772 0.4265419 10 0.398459 0.015838 0.3826214 3.3833e-27 1.0000e+00 hypermethylated 4.8332e-25 1.0000e+00 hypermethylated 5.1623e-18 1.0000e+00 hypermethylated 5.1623e-15 1.0000e+00 hypermethylated 0.4003693 3.5257e-06 hypermethylated 2.7121e-04 hypermethylated 0.442708 0.1062813 0.3569587 9 0.440724 0.071231 0.3694930 3.4842e-20 1.0000e+00 hypermethylated 1.1614e-17 1.0000000 hypermethylated 7.2054e-17 1.00000000 hypermethylated 7.2054e-14 1.00000 hypermethylated 0.3536011 1.3115e-05 hypermethylated 0.0032788 hypermethylated 0.021978 0.1062813 -0.0667706 9 0.020589 0.071231 -0.0506420 0.9999887 1.4457e-06 weaklyHypometh 1.00000 8.5043e-05 weaklyHypometh 0.9999930 2.5315e-04 weaklyHypometh 1 1.6877e-02 weaklyHypometh -0.046768 0.10756315 insignificant 1.000000 insignificant chr12 129155228 129156228 118412 ENSG00000214039 0.658120 147 4 0.380881 306 6 0.4815369 225 5 0.435670 214 4 0.445294 141 6 0.614815 321 6 0.389667 177 6 0.460844 237 6 0.463596 225 5 0.3747202 181 4 0.584032 254 7 0.216853 93 4 0.327478 315 7 0.564306 156 6 0.443628 237 5 0.1166667 43 4 0.1000000 28 3 0.352187 257 5 0.534173 279 5 0.501539 260 6 0.6956259 112 5 0.290815 179 6 0.6305176 172 4 0.322206 170 7 0.417537 98 6 0.5137211 327 6 0.478942 194 6 0.3816346 101 5 0.6248730 310 6 0.4498046 499 6 0.5816622 393 6 0.861419 268 6 0.048070 308 6 0.0552778 138 5 0.0000000 202 4 0.00000 19 1 0.032372 309 7 0.0700341 366 6 0.164763 317 4 0.115488 267 5 0.0133598 245 4 0.020614 263 4 0.3285196 171 5 0.510652 0.465579 0.540816 0.293346 0.480966 0.585847 0.529786 0.5155357 0.432912 0.5280253 0.5799027 0.367758 0.182597 0.484365 0.308762 0.1115153 0.0820802 0.290271 0.447541 0.2638121 0.632755 0.101338 0.499318 0.450442 0.370432 0.3523311 0.342364 0.50482952 0.4195327 0.304638 0.498292 0.709019 0.020595 0.017586 0.0046234 0.00193121 0.032088 0.025485 0.089054 0.0460272 0.032772 0.0396287 0.066468 4 0.430386 0.456768 -0.01907764 6 0.429908 0.453890 -0.0239821 9.4503e-01 0.17478800 insignificant 1.0000e+00 1.00000 insignificant 9.9203e-01 0.24971912 insignificant 1.0000000 1.00000 insignificant -9.8430e-02 0.1062523 insignificant 1 insignificant 0.430039 0.031297 0.4125368 6 0.350988 0.026707 0.3242806 2.6928e-26 1.0000e+00 hypermethylated 2.6928e-24 1.0000e+00 hypermethylated 3.5503e-10 1.0000e+00 hypermethylated 3.9447e-08 1.0000e+00 hypermethylated 0.3880080 1.5611e-10 lowCoverage 3.9028e-08 lowCoverage 0.437344 0.0506730 0.3685344 4 0.513661 0.136792 0.37686955 2.7321e-19 1.0000e+00 lowCoverage 6.8304e-17 1.000000 lowCoverage 6.5665e-09 1.0000e+00 lowCoverage 1.6416e-06 1.000000 lowCoverage 0.29375139 3.1422e-03 lowCoverage 0.16538018 lowCoverage 0.457031 0.031297 0.4358310 6 0.457038 0.026707 0.4303308 1.6496e-21 1.0000e+00 hypermethylated 1.6496e-19 1.0000e+00 hypermethylated 1.7220e-11 1.0000e+00 hypermethylated 3.4440e-09 1.0000e+00 hypermethylated 0.4864376 3.3751e-07 lowCoverage 5.6252e-05 lowCoverage 0.461008 0.0506730 0.3797437 4 0.556769 0.136792 0.4199775 6.9941e-15 1.0000e+00 lowCoverage 1.7485e-12 1.0000000 lowCoverage 6.5520e-10 1.00000000 lowCoverage 1.6380e-07 1.00000 lowCoverage 0.3921809 4.1548e-04 lowCoverage 0.0535004 lowCoverage 0.031891 0.0506730 -0.0358001 4 0.040061 0.136792 -0.0967308 0.9990549 3.1547e-03 lowCoverage 1.00000 6.1856e-02 lowCoverage 0.9993348 1.5600e-02 lowCoverage 1 3.4666e-01 lowCoverage -0.094257 0.17877204 lowCoverage 1.000000 lowCoverage chr12 129508223 129509223 118420 PIWIL1 ENSG00000125207 0.870689 236 5 0.849471 107 3 0.5073684 63 3 0.862829 231 5 0.933333 15 3 0.881690 227 5 0.827381 23 3 0.877785 83 3 0.775040 105 3 0.9400000 42 3 0.814707 129 3 0.822222 11 1 0.776026 93 3 0.947213 60 3 0.793706 85 3 0.1969697 14 1 0.6666667 6 0 0.589860 246 5 0.895194 218 5 0.910087 146 5 0.9803922 43 3 0.689947 47 3 0.8553846 87 3 0.632155 56 3 0.800000 18 1 0.9035017 175 5 0.882963 44 3 0.9222222 35 3 0.9120161 102 3 0.9339205 190 4 0.6892887 118 4 0.826611 270 5 0.552190 111 3 0.1450397 57 3 0.6000000 212 5 0.49442 96 3 0.488914 108 3 0.6394450 179 5 0.880100 149 5 0.790562 174 5 0.9108833 229 5 0.643598 146 5 0.8143010 166 5 0.866083 0.820060 0.554991 0.839139 0.896552 0.857495 0.840517 0.8597755 0.740173 0.9000000 0.7968570 0.816092 0.814167 0.951558 0.775380 0.1677116 0.6206897 0.793216 0.881803 0.8516618 0.985801 0.696661 0.962122 0.620777 0.827586 0.8793392 0.904215 0.84482759 0.9362875 0.898697 0.881433 0.843364 0.563655 0.227593 0.4827586 0.47126437 0.495336 0.633591 0.839080 0.8051910 0.885688 0.7801451 0.772838 1 0.839495 0.857264 -0.02487066 4 0.839405 0.815995 0.0234101 9.6247e-01 0.79968976 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9235e-01 0.53221131 lowCoverage 1.0000000 1.00000 lowCoverage -4.8788e-02 0.3510879 lowCoverage 1 lowCoverage 0.839813 0.555118 0.2779905 5 0.914828 0.529708 0.3851208 1.4656e-06 1.0000e+00 hypermethylated 2.7652e-05 1.0000e+00 hypermethylated 8.1153e-04 1.0000e+00 hypermethylated 1.6907e-02 1.0000e+00 hypermethylated 0.3002435 6.2596e-03 lowCoverage 1.6926e-01 lowCoverage 0.839210 0.8524971 0.0066587 5 0.846691 0.847486 -0.00079460 6.8527e-01 6.2810e-01 insignificant 1.0000e+00 1.000000 insignificant 5.6367e-01 3.5837e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02097678 7.3928e-01 lowCoverage 1.00000000 lowCoverage 0.858714 0.554391 0.2914056 4 0.897595 0.476737 0.4208576 7.0745e-05 1.0000e+00 lowCoverage 1.2411e-03 1.0000e+00 lowCoverage 8.6592e-04 1.0000e+00 lowCoverage 2.1120e-02 1.0000e+00 lowCoverage 0.3490317 3.0883e-03 lowCoverage 1.0649e-01 lowCoverage 0.858483 0.8524971 0.0361266 4 0.861856 0.847486 0.0143698 1.8058e-01 5.4815e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8240e-02 0.96648260 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0278115 6.3566e-01 lowCoverage 1.0000000 lowCoverage 0.555409 0.8524971 -0.2808736 5 0.553474 0.847486 -0.2940121 0.9999702 8.7777e-05 hypomethylated 1.00000 2.9259e-03 hypomethylated 0.9999989 6.8442e-05 hypomethylated 1 7.6047e-03 hypomethylated -0.321220 0.00547798 lowCoverage 0.276701 lowCoverage chr12 130662091 130663091 118423 ENSG00000212251 0.860773 257 7 0.672604 209 7 0.8570700 109 6 0.934481 252 7 0.792614 51 4 0.793678 279 7 0.703405 127 6 0.751655 115 7 0.829329 74 6 0.8401321 66 4 0.682539 194 7 0.975000 20 1 0.929464 92 6 0.969089 53 6 0.900993 94 6 0.7500000 19 1 0.8461538 13 1 0.850209 262 7 0.799028 210 6 0.959862 184 7 0.9712324 71 6 0.932099 55 2 0.6991378 162 7 0.781250 51 5 0.840803 325 7 0.9570464 209 7 0.806771 90 5 0.9219388 49 4 0.9313403 198 6 0.7283428 200 7 0.7789806 252 7 0.953090 200 7 0.659952 166 6 0.6265770 149 7 0.7384615 135 5 0.71769 56 4 0.680059 114 8 0.8500482 317 7 0.920788 220 7 0.847374 219 7 0.7578038 189 6 0.961710 316 5 0.7592474 236 7 0.884077 0.801294 0.861567 0.939060 0.879718 0.858187 0.876367 0.9140562 0.835735 0.9369212 0.8530220 0.918990 0.917995 0.964809 0.945080 0.7001881 NA 0.853381 0.897772 0.9568678 0.945040 0.937794 0.889817 0.904412 0.945644 0.9374958 0.900858 0.87300420 0.9315121 0.874674 0.935851 0.932267 0.765669 0.669307 0.8452304 0.78957531 0.796798 0.807731 0.922178 0.9034260 0.871574 0.9687665 0.888515 2 0.882090 0.913487 -0.03091335 6 0.772161 0.762356 0.0098048 8.2510e-01 0.11371197 insignificant 1.0000e+00 1.00000 insignificant 8.5787e-01 0.09269079 insignificant 1.0000000 1.00000 insignificant -2.3599e-02 0.5056424 insignificant 1 insignificant 0.882090 0.744931 0.1339194 6 0.772161 0.677636 0.0945245 3.7402e-08 9.7348e-01 weaklyHypermeth 8.9053e-07 1.0000e+00 weaklyHypermeth 4.9108e-04 9.9263e-01 weaklyHypermeth 1.1420e-02 1.0000e+00 weaklyHypermeth 0.1227731 9.6998e-03 weaklyHypermeth 2.3658e-01 insignificant 0.882090 0.9067797 -0.0186575 6 0.772161 0.691206 0.08095453 5.8221e-01 4.9144e-01 insignificant 1.0000e+00 1.000000 insignificant 5.9333e-01 8.0084e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01448071 7.6469e-01 insignificant 1.00000000 insignificant 0.913487 0.744931 0.1621701 7 0.762356 0.677636 0.0847197 1.7045e-06 1.0000e+00 weaklyHypermeth 4.0583e-05 1.0000e+00 weaklyHypermeth 5.2279e-04 9.9538e-01 weaklyHypermeth 1.4309e-02 1.0000e+00 weaklyHypermeth 0.1463718 4.7516e-03 weaklyHypermeth 1.4961e-01 insignificant 0.913487 0.9067797 0.0164892 7 0.762356 0.691206 0.0711497 4.5191e-01 9.3787e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.8951e-01 0.99371761 insignificant 1.0000e+00 1.00000 insignificant 0.0091180 8.5982e-01 insignificant 1.0000000 insignificant 0.744931 0.9067797 -0.1461200 7 0.677636 0.691206 -0.0135700 0.9672695 7.5243e-03 weaklyHypometh 1.00000 1.2973e-01 insignificant 0.9857601 2.6269e-02 weaklyHypometh 1 4.9099e-01 insignificant -0.137254 0.03068225 weaklyHypometh 0.718309 insignificant chr12 131154468 131155468 118426 EP400NL ENSG00000185684 0.891421 375 17 0.750756 338 15 0.8069762 312 17 0.935602 333 16 0.764522 197 7 0.889803 443 17 0.893707 291 14 0.891050 303 16 0.931189 238 16 0.9235496 267 19 0.885141 500 17 0.864238 153 9 0.887153 300 16 0.945541 194 11 0.884221 281 9 0.7664103 108 8 0.7500000 3 0 0.951260 480 15 0.936024 439 18 0.923650 325 12 0.8371995 169 10 0.848589 86 5 0.9209188 258 15 0.897619 175 7 0.848849 131 9 0.9426269 512 17 0.950879 277 13 0.6961103 125 7 0.9508122 388 17 0.8654796 453 19 0.9186007 458 19 0.903801 331 19 0.886484 259 11 0.9606560 237 16 0.8763594 448 6 0.98913 114 7 0.890011 209 12 0.8828797 443 18 0.910214 378 13 0.972680 344 17 0.9378903 264 16 0.966901 393 13 0.9413092 208 12 0.883931 0.876606 0.883481 0.924642 0.778257 0.892796 0.906299 0.9224326 0.897186 0.9403905 0.9415758 0.886795 0.895403 0.963762 0.940448 0.8256093 NA 0.943588 0.920864 0.9254137 0.919716 0.951776 0.960504 0.930386 0.944830 0.9425456 0.918188 0.86631640 0.9382898 0.943200 0.943131 0.931035 0.943304 0.942038 0.8389875 0.94379116 0.915278 0.939244 0.967782 0.9671289 0.951220 0.9364785 0.964106 6 0.908998 0.931784 -0.02292303 16 0.869340 0.901179 -0.0318393 9.9900e-01 0.00802441 weaklyHypometh 1.0000e+00 0.65346 insignificant 9.9863e-01 0.02931498 weaklyHypometh 1.0000000 1.00000 insignificant -8.1796e-03 0.7517218 insignificant 1 insignificant 0.908983 0.928028 -0.0157147 16 0.862807 0.900944 -0.0381372 3.7316e-01 2.0516e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8115e-01 1.6317e-03 weaklyHypometh 1.0000e+00 5.5490e-01 insignificant -0.0406428 1.2772e-01 insignificant 1.0000e+00 insignificant 0.908983 0.9590164 -0.0485138 13 0.862807 0.953419 -0.09061254 9.9999e-01 2.2563e-04 weaklyHypometh 1.0000e+00 0.075210 weaklyHypometh 9.9995e-01 3.1116e-04 weaklyHypometh 1.0000e+00 0.103719 insignificant -0.07218808 1.1546e-03 weaklyHypometh 0.09383475 weaklyHypometh 0.931825 0.928070 0.0065083 14 0.901179 0.905661 -0.0044818 2.9086e-01 2.9746e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3511e-01 3.8091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0324632 2.7207e-01 insignificant 1.0000e+00 insignificant 0.931486 0.9590422 -0.0271119 12 0.853560 0.955637 -0.1020774 9.9998e-01 6.2154e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.9994e-01 0.20792688 insignificant 1.0000e+00 1.00000 insignificant -0.0640085 1.5471e-02 weaklyHypometh 0.5950258 insignificant 0.928028 0.9590164 -0.0335027 10 0.900944 0.953419 -0.0524753 0.9457436 1.9394e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9000366 4.9339e-01 insignificant 1 1.0000e+00 insignificant -0.031545 0.20126088 insignificant 1.000000 insignificant chr12 131154785 131155785 118427 EP400NL ENSG00000185684 0.907433 316 16 0.745041 252 14 0.8006090 260 16 0.940058 272 15 0.781167 175 6 0.895906 330 16 0.895356 260 13 0.887526 246 15 0.936333 190 15 0.9344398 227 18 0.884735 415 16 0.853257 113 8 0.888392 254 15 0.930617 155 10 0.878042 182 8 0.7883807 105 7 0.7500000 3 0 0.952579 419 14 0.944501 336 17 0.928388 261 11 0.8387959 142 9 0.831481 49 4 0.9173702 246 14 0.897321 101 6 0.831457 98 7 0.9448070 425 16 0.958547 198 12 0.7285494 81 6 0.9520254 308 16 0.8535970 356 18 0.9223388 408 18 0.904566 286 18 0.880341 200 10 0.9555138 218 15 0.8744108 125 5 0.98814 112 7 0.881604 133 11 0.8784787 376 17 0.902805 317 12 0.973808 303 16 0.9352032 180 15 0.978991 380 12 0.9342857 160 11 0.969738 0.883858 0.857500 0.934450 0.874684 0.918694 0.916549 0.9119860 0.919162 0.9585262 0.9596163 0.833716 0.900164 0.927351 0.924730 0.9212438 NA 0.936623 0.952868 0.9441747 0.918269 0.907948 0.946212 0.958486 0.925526 0.9586104 0.952888 0.85846319 0.9347412 0.936258 0.968918 0.943585 0.919760 0.920212 0.7802851 0.90958579 0.870112 0.919236 0.956180 0.9671222 0.943008 0.9831358 0.940217 5 0.916544 0.936526 -0.02004884 15 0.869814 0.901122 -0.0313082 9.9897e-01 0.01538655 weaklyHypometh 1.0000e+00 0.85481 insignificant 9.9791e-01 0.09059792 insignificant 1.0000000 1.00000 insignificant -5.6001e-03 0.8213204 insignificant 1 insignificant 0.916527 0.911436 0.0056633 15 0.862962 0.897208 -0.0342457 3.1026e-01 1.1216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5884e-01 4.0695e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0336103 2.0676e-01 insignificant 1.0000e+00 insignificant 0.916527 0.9566841 -0.0369572 12 0.862962 0.952110 -0.08914831 9.9997e-01 1.6489e-03 weaklyHypometh 1.0000e+00 0.329779 insignificant 9.9990e-01 2.2128e-03 weaklyHypometh 1.0000e+00 0.553205 insignificant -0.06888044 4.6738e-03 weaklyHypometh 0.20320930 insignificant 0.936573 0.911512 0.0243421 13 0.901122 0.902347 -0.0012251 2.1196e-01 6.3112e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8762e-01 6.3063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0280102 3.3379e-01 insignificant 1.0000e+00 insignificant 0.936154 0.9567164 -0.0182162 11 0.851122 0.954505 -0.1033826 9.9988e-01 1.7761e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9976e-01 0.28532249 insignificant 1.0000e+00 1.00000 insignificant -0.0632804 1.8975e-02 weaklyHypometh 0.6384523 insignificant 0.911436 0.9566841 -0.0427541 9 0.897208 0.952110 -0.0549026 0.9355042 1.8263e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9377364 4.4472e-01 insignificant 1 1.0000e+00 insignificant -0.035270 0.18647648 insignificant 1.000000 insignificant chr12 131595451 131596451 118429 ENSG00000204586 0.854979 1106 36 0.791864 680 35 0.8767400 927 40 0.957183 1215 32 0.861236 404 23 0.888562 1354 36 0.806554 645 34 0.922313 775 36 0.860919 776 38 0.9351844 1073 39 0.923271 998 37 0.818134 533 28 0.888976 1186 40 0.926098 599 24 0.910306 1110 36 0.7634736 364 18 0.7695283 153 13 0.898183 1359 32 0.949075 771 36 0.895257 1041 38 0.8626396 575 38 0.935316 537 28 0.8595138 877 36 0.851067 405 33 0.960803 507 32 0.9409152 803 36 0.823769 598 38 0.7481486 416 30 0.8718634 755 37 0.9406510 810 36 0.9139577 991 36 0.850748 1681 36 0.885775 610 35 0.9242802 713 36 0.9119854 608 26 0.94427 332 27 0.763329 625 39 0.6203417 1209 36 0.852623 1083 34 0.926636 1165 35 0.9639073 902 32 0.913987 1398 34 0.9525265 1198 32 0.937677 0.891677 0.895976 0.954679 0.916140 0.902402 0.895271 0.9277363 0.900388 0.9525292 0.9223486 0.858552 0.953213 0.940694 0.926487 0.7943772 0.8568034 0.946938 0.954765 0.9347325 0.901676 0.937882 0.910317 0.856004 0.957207 0.9469817 0.876450 0.84682877 0.9239458 0.939747 0.926230 0.891064 0.936340 0.910356 0.9249582 0.95350274 0.866645 0.695703 0.926037 0.9520268 0.966757 0.9444410 0.942539 22 0.918708 0.908878 0.01023874 36 0.888555 0.841706 0.0468488 8.0590e-03 0.92251417 weaklyHypermeth 1.0000e+00 1.00000 insignificant 1.4780e-01 0.94209855 insignificant 1.0000000 1.00000 insignificant -5.0576e-03 0.8199533 insignificant 1 insignificant 0.918498 0.834513 0.0830817 36 0.861423 0.752743 0.1086795 1.3650e-18 1.0000e+00 weaklyHypermeth 8.0295e-17 1.0000e+00 weaklyHypermeth 3.7006e-01 8.8959e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0332285 5.5560e-01 insignificant 1.0000e+00 insignificant 0.918963 0.9444831 -0.0176581 34 0.885828 0.892117 -0.00628897 6.6395e-01 1.5602e-03 weaklyHypometh 1.0000e+00 0.329779 insignificant 9.8852e-01 7.5626e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04704414 7.9474e-02 insignificant 1.00000000 insignificant 0.909172 0.834921 0.0721449 36 0.870570 0.789463 0.0811070 1.8457e-09 1.0000e+00 weaklyHypermeth 7.3827e-08 1.0000e+00 weaklyHypermeth 6.1846e-01 7.6554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0382862 5.0694e-01 insignificant 1.0000e+00 insignificant 0.909274 0.9446475 -0.0317484 34 0.892334 0.914420 -0.0220865 9.5770e-01 4.8017e-05 weaklyHypometh 1.0000e+00 0.0240085 weaklyHypometh 9.9827e-01 0.00099637 weaklyHypometh 1.0000e+00 0.49818 insignificant -0.0419865 1.3945e-01 insignificant 1.0000000 insignificant 0.834921 0.9444831 -0.1021494 34 0.789463 0.892117 -0.1026548 0.9999999 1.1241e-07 weaklyHypometh 1.00000 9.3679e-06 weaklyHypometh 0.9823815 1.9220e-01 insignificant 1 1.0000e+00 insignificant -0.080273 0.19188068 insignificant 1.000000 insignificant chr13 18151942 18152942 118439 ENSG00000219611 0.629632 610 9 0.786487 236 7 0.4554862 91 10 0.682469 416 9 0.527184 113 10 0.633020 481 9 0.563532 61 7 0.559856 224 9 0.661422 61 4 0.7322587 224 9 0.779049 267 9 0.416667 22 0 0.572963 271 9 0.718709 116 6 0.693782 184 9 0.9300000 100 4 NA 0 0 0.606590 715 9 0.605646 443 5 0.699138 412 9 0.7004662 63 4 0.843750 64 4 0.6173361 244 9 0.818182 95 5 0.469697 37 0 0.9085103 395 9 0.636067 247 5 0.6363636 33 1 0.5428611 408 9 0.7554342 268 9 0.6506038 372 9 0.827196 317 9 0.731061 216 9 0.4230856 376 9 0.3978282 232 9 0.00000 44 5 0.652525 67 9 0.7112010 413 9 0.565541 444 10 0.553358 433 9 0.4685777 569 10 0.573834 899 9 0.7513713 432 9 0.795407 0.897793 0.670849 0.818715 0.790890 0.806623 0.603455 0.7629083 0.697467 0.8155069 0.8748637 0.477642 0.766023 0.841640 0.837058 0.8057710 NA 0.783434 0.786484 0.8159151 0.803315 0.793922 0.845224 0.970190 0.556233 0.9364821 0.756218 0.85569106 0.7572116 0.858525 0.838155 0.898929 0.778486 0.641265 0.3706454 0.46787593 0.742412 0.769951 0.745353 0.7654230 0.678231 0.7806898 0.876064 0 0.836803 0.858828 -0.01114917 9 0.620036 0.672501 -0.0524649 7.7773e-01 0.00494113 weaklyHypometh 1.0000e+00 0.54901 insignificant 6.8625e-01 0.00232526 weaklyHypometh 1.0000000 0.46505 insignificant -5.5597e-02 0.2515886 insignificant 1 insignificant 0.836803 0.656528 0.1697327 9 0.620036 0.521695 0.0983407 5.4468e-08 7.3815e-01 weaklyHypermeth 1.2104e-06 1.0000e+00 weaklyHypermeth 8.3798e-05 9.3752e-01 weaklyHypermeth 2.7632e-03 1.0000e+00 weaklyHypermeth 0.1589915 2.2571e-01 insignificant 1.0000e+00 insignificant 0.836803 0.8149082 0.0371315 9 0.620036 0.571511 0.04852477 3.6519e-02 9.9434e-01 weaklyHypermeth 8.4927e-01 1.000000 insignificant 6.3698e-02 9.8541e-01 insignificant 1.0000e+00 1.000000 insignificant 0.06240533 2.8399e-01 insignificant 1.00000000 insignificant 0.858828 0.656528 0.1940767 9 0.672501 0.521695 0.1508056 3.2563e-06 9.9846e-01 weaklyHypermeth 7.4007e-05 1.0000e+00 weaklyHypermeth 1.8125e-05 1.0000e+00 weaklyHypermeth 7.8806e-04 1.0000e+00 weaklyHypermeth 0.2145888 1.2202e-01 insignificant 1.0000e+00 insignificant 0.858828 0.8149082 0.0496362 9 0.672501 0.571511 0.1009897 1.8156e-04 9.9966e-01 weaklyHypermeth 8.2527e-03 1.0000000 weaklyHypermeth 6.7471e-04 0.99674546 weaklyHypermeth 4.9349e-02 1.00000 weaklyHypermeth 0.1180026 7.8278e-02 insignificant 1.0000000 insignificant 0.656528 0.8149082 -0.1301811 9 0.521695 0.571511 -0.0498159 0.3448803 4.0445e-02 weaklyHypometh 1.00000 4.9932e-01 insignificant 0.8233031 3.2703e-02 weaklyHypometh 1 5.5134e-01 insignificant -0.096586 0.45807486 insignificant 1.000000 insignificant chr13 18358938 18359938 118448 ENSG00000206787 0.626419 211 5 0.599400 145 5 0.4980769 106 5 0.575438 104 5 0.605490 69 5 0.566463 230 5 0.547688 133 5 0.637774 170 5 0.535098 123 5 0.5686554 141 5 0.537917 146 5 0.543333 89 5 0.625926 180 5 NA 0 0 0.528214 137 5 0.5611111 80 4 0.4785827 90 5 0.571345 91 5 0.626024 201 5 0.562916 233 5 0.7250000 52 5 0.591111 32 5 0.5124720 136 5 0.769231 21 1 0.733095 41 5 0.5868952 230 5 0.742424 34 3 0.7057143 28 4 0.5102273 152 5 0.6349886 267 5 0.5813793 229 5 0.569776 266 5 0.482816 133 5 0.4157759 155 5 0.3378882 74 5 0.67968 60 5 0.572103 67 5 0.5693678 254 5 0.581422 190 5 0.613248 147 5 0.5301299 123 5 0.572923 144 5 0.6217046 137 5 0.636229 0.600489 0.504090 0.583263 0.611390 0.567749 0.547031 0.6433787 0.532999 0.5716150 0.5412420 0.539991 0.633405 NA 0.534283 0.5570064 0.4767565 0.572913 0.626359 0.5619661 0.721844 0.579759 0.517686 0.740323 0.714657 0.5941384 0.752606 0.71419472 0.5124855 0.633658 0.585723 0.568188 0.478631 0.419895 0.3217550 0.66047853 0.573853 0.569060 0.589662 0.6092625 0.536695 0.5779586 0.621578 5 0.566256 0.602151 -0.02318796 5 0.573829 0.596389 -0.0225598 9.3609e-01 0.08140289 insignificant 1.0000e+00 1.00000 insignificant 9.8596e-01 0.00095290 weaklyHypometh 1.0000000 0.35736 insignificant -7.0322e-02 0.0271272 lowCoverage 1 lowCoverage 0.566256 0.515478 0.0565687 5 0.573829 0.512550 0.0612798 3.7970e-03 4.3018e-01 weaklyHypermeth 4.7462e-02 1.0000e+00 weaklyHypermeth 2.6235e-02 4.3852e-01 weaklyHypermeth 3.7478e-01 1.0000e+00 insignificant 0.0585993 3.0003e-01 lowCoverage 1.0000e+00 lowCoverage 0.566256 0.5897436 -0.0200836 5 0.573829 0.585623 -0.01179385 2.1131e-01 4.3138e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 3.8857e-01 3.5899e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.01568154 4.3895e-01 lowCoverage 1.00000000 lowCoverage 0.602151 0.515478 0.0885218 5 0.596389 0.512550 0.0838396 1.0904e-02 9.6914e-01 weaklyHypermeth 1.3803e-01 1.0000e+00 insignificant 5.7880e-03 9.9943e-01 weaklyHypermeth 1.0921e-01 1.0000e+00 insignificant 0.1289217 5.3129e-02 lowCoverage 8.3768e-01 lowCoverage 0.602151 0.5897436 0.0119388 5 0.596389 0.585623 0.0107659 4.2620e-01 4.1117e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.9682e-01 0.88564241 insignificant 1.0000e+00 1.00000 insignificant 0.0546409 1.0106e-01 lowCoverage 1.0000000 lowCoverage 0.515478 0.5897436 -0.0769562 5 0.512550 0.585623 -0.0730736 0.9846484 9.2170e-03 weaklyHypometh 1.00000 1.4920e-01 insignificant 0.9720928 1.6228e-02 weaklyHypometh 1 3.5277e-01 insignificant -0.074281 0.20826201 insignificant 1.000000 insignificant chr13 21670580 21671580 118573 ENSG00000219046 0.771486 217 6 0.701212 132 6 0.5188945 72 6 0.716359 131 6 0.805556 41 2 0.822479 223 6 0.753881 90 6 0.689583 96 6 0.728704 76 6 0.8865079 77 6 0.781979 153 6 0.557540 41 2 0.733880 84 5 0.615385 26 2 0.634743 105 6 0.6396257 80 3 0.8333333 8 0 0.521114 143 5 0.877636 84 6 0.807293 203 6 0.7680098 59 5 0.424819 71 5 0.7949827 120 6 0.729964 56 6 0.923611 29 3 0.7850823 145 6 0.609371 79 6 0.5833333 11 0 0.6854669 139 6 0.8781217 164 6 0.7990403 163 6 0.742986 224 6 0.293738 175 6 0.1531566 126 6 0.3324619 147 5 0.25000 33 3 0.396327 101 6 0.0925787 219 6 0.586058 211 6 0.496017 237 6 0.5751952 157 6 0.386112 152 6 0.4552544 211 6 0.717656 0.667733 0.519425 0.675486 0.815047 0.811697 0.708754 0.5867932 0.704464 0.8450680 0.7440639 0.519558 0.762764 0.700480 0.648269 0.6556750 0.7012192 0.489420 0.827108 0.7499484 0.787014 0.433286 0.774829 0.651456 0.918899 0.7678470 0.525494 0.73701087 0.6618695 0.883985 0.762032 0.693717 0.416716 0.222186 0.4324463 0.32221139 0.350255 0.071515 0.528334 0.4004444 0.514897 0.4520587 0.439876 2 0.718060 0.746032 -0.00696305 6 0.738383 0.744505 -0.0061219 8.3154e-01 0.62926759 insignificant 1.0000e+00 1.00000 insignificant 8.6539e-01 0.50133723 insignificant 1.0000000 1.00000 insignificant -7.2061e-03 0.8782202 lowCoverage 1 lowCoverage 0.718060 0.248750 0.4794252 6 0.738383 0.200765 0.5376175 4.3495e-39 1.0000e+00 hypermethylated 6.2136e-37 1.0000e+00 hypermethylated 2.0319e-08 9.9960e-01 hypermethylated 1.4514e-06 1.0000e+00 hypermethylated 0.4668159 1.8938e-05 lowCoverage 1.1836e-03 lowCoverage 0.718060 0.4756980 0.2433236 6 0.738383 0.488834 0.24954871 3.2626e-14 1.0000e+00 hypermethylated 5.4377e-12 1.000000 hypermethylated 5.1587e-08 1.0000e+00 hypermethylated 1.0317e-05 1.000000 hypermethylated 0.22013223 1.2199e-03 lowCoverage 0.09383475 lowCoverage 0.746032 0.248750 0.5343835 6 0.744505 0.200765 0.5437395 4.0752e-27 1.0000e+00 hypermethylated 5.0940e-25 1.0000e+00 hypermethylated 8.6933e-08 9.9996e-01 hypermethylated 5.7956e-06 1.0000e+00 hypermethylated 0.4740220 4.8571e-06 hypermethylated 3.4594e-04 hypermethylated 0.746032 0.4756980 0.2624358 6 0.744505 0.488834 0.2556706 1.0911e-09 1.0000e+00 hypermethylated 1.2124e-07 1.0000000 hypermethylated 7.7881e-06 0.99999888 hypermethylated 9.7352e-04 1.00000 hypermethylated 0.2273383 1.2054e-03 weaklyHypermeth 0.1339297 insignificant 0.249688 0.4762397 -0.2284089 6 0.314942 0.561858 -0.2469161 0.9964857 1.6757e-11 hypomethylated 1.00000 2.7929e-09 hypomethylated 0.9699135 5.7243e-04 hypomethylated 1 2.8621e-02 hypomethylated -0.246684 0.00255844 weaklyHypometh 0.197286 insignificant chr13 21681759 21682759 118574 ENSG00000219046 0.321272 48 3 0.382650 68 5 0.2930159 49 4 0.313810 41 3 0.415330 37 3 0.399573 109 3 0.368889 39 4 0.439753 88 5 0.394359 41 3 0.2073864 49 4 0.618939 67 5 0.208182 49 4 0.322589 103 5 0.450000 29 3 0.157923 85 4 0.0277778 29 3 0.2333333 22 2 0.450545 45 3 0.538883 74 5 0.455158 116 5 0.5056989 68 4 0.114506 92 3 0.2296970 70 3 0.363148 58 4 0.434253 37 2 0.5035758 105 5 0.276509 108 5 0.3771368 65 2 0.2396825 55 4 0.5688111 106 5 0.4838095 98 5 0.408547 128 4 0.441486 89 4 0.5200000 51 4 0.2293956 36 2 0.72222 6 0 0.658839 152 4 0.0410606 126 5 0.254752 71 4 0.247041 68 4 0.1458333 35 4 0.276667 25 2 0.1964286 59 3 0.482018 0.497650 0.353016 0.425714 0.383779 0.611325 0.400000 0.5810965 0.537692 0.3022727 0.5689394 0.227273 0.469184 0.461667 0.300488 0.0166667 0.3083333 0.451373 0.628161 0.5256085 0.512581 0.246911 0.437879 0.482870 0.588961 0.4967576 0.372793 0.45737179 0.3777778 0.649527 0.592857 0.508574 0.479906 0.508333 0.3549451 0.68333333 0.694289 0.066818 0.389916 0.3966744 0.216667 0.5416667 0.350000 2 0.426768 0.464646 -0.02155275 3 0.379592 0.406494 -0.0269029 7.7481e-01 0.15366634 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.3823e-01 0.07687219 lowCoverage 1.0000000 1.00000 lowCoverage -2.5480e-02 0.6146927 lowCoverage 1 lowCoverage 0.426768 0.415217 0.0048286 3 0.379592 0.355774 0.0238173 4.8569e-01 5.1251e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4367e-01 2.3038e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0855323 4.6855e-01 lowCoverage 1.0000e+00 lowCoverage 0.426768 0.3449612 0.0906444 3 0.379592 0.214241 0.16535079 4.5422e-04 9.9735e-01 lowCoverage 1.8169e-02 1.000000 lowCoverage 2.4553e-03 9.8185e-01 lowCoverage 1.0675e-01 1.000000 lowCoverage 0.12582413 4.4188e-03 lowCoverage 0.20085649 lowCoverage 0.464646 0.415217 0.0425563 5 0.406494 0.355774 0.0507202 1.4775e-01 7.2061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9697e-01 3.7806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0600528 6.1336e-01 lowCoverage 1.0000e+00 lowCoverage 0.464646 0.3449612 0.1168319 3 0.406494 0.214241 0.1922537 1.2279e-04 9.9989e-01 lowCoverage 6.1396e-03 1.0000000 lowCoverage 3.4739e-03 0.99936667 lowCoverage 1.5104e-01 1.00000 lowCoverage 0.1513036 4.8997e-03 lowCoverage 0.4083072 lowCoverage 0.415217 0.3449612 0.0914182 3 0.355774 0.214241 0.1415335 0.0345503 9.6516e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0351237 9.9092e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.211356 0.10413060 lowCoverage 1.000000 lowCoverage chr13 21691890 21692890 118577 ENSG00000219046 0.879809 295 6 0.741284 123 6 0.4898559 59 4 0.808843 183 6 0.833333 9 0 0.763200 242 7 0.700000 15 0 0.968625 124 4 0.713152 44 2 0.8446429 55 4 0.917172 184 7 1.000000 4 0 0.964421 114 4 0.675556 41 4 0.739403 44 4 0.6666667 3 0 0.7000000 10 2 0.461564 460 6 0.969159 103 6 0.808940 191 7 0.8567731 81 5 0.410573 96 5 0.9107436 91 5 0.675255 37 3 0.844952 198 6 0.8485923 144 7 0.884493 85 5 0.5000000 2 0 0.7811284 130 7 0.9267863 158 7 0.9181684 161 7 0.861047 256 7 0.222417 212 7 0.1706220 236 4 0.0000000 38 4 0.00000 82 5 0.533894 54 5 0.0090805 362 7 0.144498 343 7 0.407376 228 6 0.2249106 238 6 0.481459 273 4 0.3344824 265 6 0.889127 0.801764 0.569838 0.793476 0.833333 0.782369 0.755952 0.9604806 0.814059 0.7387755 0.9149471 0.960836 0.936582 0.671164 0.751701 0.9249837 0.7084547 0.620306 0.959061 0.8696627 0.857574 0.370209 0.836129 0.831420 0.832635 0.9164415 0.893540 0.47011746 0.7965469 0.911040 0.893985 0.890827 0.347851 0.235491 0.0000000 0.00000000 0.708791 0.020691 0.113212 0.2569950 0.277122 0.2489583 0.300913 0 0.811034 0.829048 -0.02161103 6 0.762967 0.843684 -0.0807168 8.4603e-01 0.22569447 insignificant 1.0000e+00 1.00000 insignificant 9.0935e-01 0.59083255 insignificant 1.0000000 1.00000 insignificant -2.5947e-03 0.9654283 lowCoverage 1 lowCoverage 0.811304 0.165819 0.6335865 6 0.800534 0.143982 0.6565521 2.6241e-40 1.0000e+00 hypermethylated 5.2482e-38 1.0000e+00 hypermethylated 1.3895e-14 1.0000e+00 hypermethylated 2.7790e-12 1.0000e+00 hypermethylated 0.6262791 3.1449e-04 lowCoverage 1.4976e-02 lowCoverage 0.811304 0.2835932 0.5099007 6 0.800534 0.282973 0.51756077 1.2014e-30 1.0000e+00 hypermethylated 6.0069e-28 1.000000 hypermethylated 5.9444e-11 1.0000e+00 hypermethylated 1.9815e-08 1.000000 hypermethylated 0.46373625 3.5016e-04 lowCoverage 0.05002240 lowCoverage 0.828929 0.165819 0.6542606 7 0.821353 0.143982 0.6773714 1.0521e-37 1.0000e+00 hypermethylated 2.6302e-35 1.0000e+00 hypermethylated 2.9187e-13 1.0000e+00 hypermethylated 7.2966e-11 1.0000e+00 hypermethylated 0.6288738 1.6698e-04 hypermethylated 9.2769e-03 hypermethylated 0.828929 0.2835932 0.5506860 6 0.821353 0.282973 0.5383800 2.1171e-27 1.0000e+00 hypermethylated 1.0586e-24 1.0000000 hypermethylated 7.9619e-11 1.00000000 hypermethylated 2.6540e-08 1.00000 hypermethylated 0.4663310 1.7192e-04 hypermethylated 0.0286532 hypermethylated 0.165819 0.2835932 -0.1465311 6 0.143982 0.282973 -0.1389914 0.8634936 1.7074e-04 weaklyHypometh 1.00000 4.8782e-03 weaklyHypometh 0.9670752 2.7594e-03 weaklyHypometh 1 9.0987e-02 weaklyHypometh -0.162543 0.15622695 insignificant 1.000000 insignificant chr13 21692110 21693110 118578 ENSG00000219046 0.879809 295 6 0.741284 123 6 0.4898559 59 4 0.808843 183 6 0.833333 9 0 0.763200 242 7 0.700000 15 0 0.968625 124 4 0.713152 44 2 0.8446429 55 4 0.917172 184 7 1.000000 4 0 0.964421 114 4 0.675556 41 4 0.739403 44 4 0.6666667 3 0 0.7000000 10 2 0.461564 460 6 0.969159 103 6 0.808940 191 7 0.8567731 81 5 0.410573 96 5 0.9107436 91 5 0.675255 37 3 0.844952 198 6 0.8485923 144 7 0.884493 85 5 0.5000000 2 0 0.7811284 130 7 0.9267863 158 7 0.9181684 161 7 0.861047 256 7 0.222417 212 7 0.1706220 236 4 0.0000000 38 4 0.00000 82 5 0.533894 54 5 0.0090805 362 7 0.144498 343 7 0.407376 228 6 0.2249106 238 6 0.481459 273 4 0.3344824 265 6 0.889127 0.801764 0.569838 0.793476 0.833333 0.782369 0.755952 0.9604806 0.814059 0.7387755 0.9149471 0.960836 0.936582 0.671164 0.751701 0.9249837 0.7084547 0.620306 0.959061 0.8696627 0.857574 0.370209 0.836129 0.831420 0.832635 0.9164415 0.893540 0.47011746 0.7965469 0.911040 0.893985 0.890827 0.347851 0.235491 0.0000000 0.00000000 0.708791 0.020691 0.113212 0.2569950 0.277122 0.2489583 0.300913 0 0.811034 0.829048 -0.02161103 6 0.762967 0.843684 -0.0807168 8.4603e-01 0.22569447 insignificant 1.0000e+00 1.00000 insignificant 9.0935e-01 0.59083255 insignificant 1.0000000 1.00000 insignificant -2.5947e-03 0.9654283 lowCoverage 1 lowCoverage 0.811304 0.165819 0.6335865 6 0.800534 0.143982 0.6565521 2.6241e-40 1.0000e+00 hypermethylated 5.2482e-38 1.0000e+00 hypermethylated 1.3895e-14 1.0000e+00 hypermethylated 2.7790e-12 1.0000e+00 hypermethylated 0.6262791 3.1449e-04 lowCoverage 1.4976e-02 lowCoverage 0.811304 0.2835932 0.5099007 6 0.800534 0.282973 0.51756077 1.2014e-30 1.0000e+00 hypermethylated 6.0069e-28 1.000000 hypermethylated 5.9444e-11 1.0000e+00 hypermethylated 1.9815e-08 1.000000 hypermethylated 0.46373625 3.5016e-04 lowCoverage 0.05002240 lowCoverage 0.828929 0.165819 0.6542606 7 0.821353 0.143982 0.6773714 1.0521e-37 1.0000e+00 hypermethylated 2.6302e-35 1.0000e+00 hypermethylated 2.9187e-13 1.0000e+00 hypermethylated 7.2966e-11 1.0000e+00 hypermethylated 0.6288738 1.6698e-04 hypermethylated 9.2769e-03 hypermethylated 0.828929 0.2835932 0.5506860 6 0.821353 0.282973 0.5383800 2.1171e-27 1.0000e+00 hypermethylated 1.0586e-24 1.0000000 hypermethylated 7.9619e-11 1.00000000 hypermethylated 2.6540e-08 1.00000 hypermethylated 0.4663310 1.7192e-04 hypermethylated 0.0286532 hypermethylated 0.165819 0.2835932 -0.1465311 6 0.143982 0.282973 -0.1389914 0.8634936 1.7074e-04 weaklyHypometh 1.00000 4.8782e-03 weaklyHypometh 0.9670752 2.7594e-03 weaklyHypometh 1 9.0987e-02 weaklyHypometh -0.162543 0.15622695 insignificant 1.000000 insignificant chr13 22172896 22173896 118610 ENSG00000218515 0.779495 267 12 0.664988 258 11 0.7916667 79 6 0.769360 152 9 0.776392 132 12 0.742970 123 8 0.670139 138 11 0.741645 202 12 0.628968 70 7 0.8136905 107 11 0.766987 329 12 0.772222 120 11 0.791388 269 12 0.742857 56 3 0.741202 197 12 0.6393939 90 9 0.6478261 121 7 0.839761 258 10 0.836412 138 5 0.855595 164 8 0.7500000 69 7 0.916667 21 0 0.7916501 242 12 0.796065 74 9 0.692757 102 6 0.7681222 257 8 0.791521 119 8 0.8888889 16 0 0.7542437 272 12 0.9210516 315 8 0.7203172 283 9 0.798070 205 8 0.689651 234 12 0.5847879 209 8 0.7572531 157 9 0.85714 10 0 0.689502 89 7 0.8248753 293 8 0.810372 151 10 0.839859 246 10 0.8372681 151 10 0.797369 186 10 0.6974026 82 7 0.829678 0.733778 0.856551 0.834049 0.821257 0.815746 0.759065 0.8298062 0.665290 0.8821962 0.8213105 0.822927 0.866749 0.865936 0.829030 0.6660774 0.7348475 0.874351 0.893369 0.8782507 0.850746 0.925373 0.856197 0.855825 0.781582 0.8319248 0.786795 0.83181571 0.8137435 0.900753 0.766021 0.838765 0.698132 0.673417 0.7702875 0.85098920 0.712622 0.841166 0.858993 0.8686224 0.862862 0.8660740 0.799440 1 0.796942 0.866261 -0.00743095 8 0.789128 0.795393 -0.0062645 8.9279e-01 0.45785359 insignificant 1.0000e+00 1.00000 insignificant 9.9581e-01 0.11651290 insignificant 1.0000000 1.00000 insignificant -4.8465e-02 0.0775605 insignificant 1 insignificant 0.796818 0.801411 0.0764434 8 0.753983 0.708693 0.0452898 2.5162e-06 9.3051e-01 weaklyHypermeth 4.6596e-05 1.0000e+00 weaklyHypermeth 3.8072e-02 8.6784e-01 weaklyHypermeth 5.2646e-01 1.0000e+00 insignificant 0.0167793 7.1296e-01 insignificant 1.0000e+00 insignificant 0.796818 0.8210784 -0.0395997 12 0.753983 0.801327 -0.04734366 9.6864e-01 1.7892e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8672e-01 9.9527e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04580607 1.7242e-01 insignificant 1.00000000 insignificant 0.866126 0.801411 0.0764548 8 0.761292 0.708693 0.0525984 1.2623e-06 9.9597e-01 weaklyHypermeth 3.1557e-05 1.0000e+00 weaklyHypermeth 4.2101e-03 9.9925e-01 weaklyHypermeth 8.5920e-02 1.0000e+00 weaklyHypermeth 0.0652441 1.9560e-01 insignificant 1.0000e+00 insignificant 0.866126 0.8210784 -0.0313731 8 0.761292 0.801327 -0.0400351 9.9353e-01 5.4966e-02 insignificant 1.0000e+00 1.0000000 insignificant 8.6653e-01 0.23915182 insignificant 1.0000e+00 1.00000 insignificant 0.0026587 9.3860e-01 insignificant 1.0000000 insignificant 0.801411 0.8210784 -0.1196682 8 0.708693 0.801327 -0.0926334 0.9997654 1.9430e-07 weaklyHypometh 1.00000 1.4947e-05 weaklyHypometh 0.9976950 9.4920e-04 weaklyHypometh 1 4.3145e-02 weaklyHypometh -0.062585 0.23195213 insignificant 1.000000 insignificant chr13 22217199 22218199 118611 ENSG00000216943 0.792323 421 9 0.672575 137 9 0.5640212 129 9 0.827638 299 9 0.818333 64 6 0.897719 355 9 0.785626 148 9 0.705906 170 9 0.843460 165 7 0.7741356 142 9 0.834777 262 9 0.725926 104 6 0.814261 218 9 0.901821 59 4 0.748942 186 9 0.4301587 68 5 0.6159658 102 7 0.839561 373 9 0.839167 129 7 0.817239 240 9 0.6216931 46 5 0.717714 170 9 0.7999819 167 9 0.586056 101 8 0.890704 141 9 0.8899374 160 9 0.717710 155 7 0.7449495 61 5 0.5722260 124 7 0.8685456 201 9 0.9022831 179 9 0.713109 354 9 0.627625 166 9 0.7115241 151 7 0.0625000 28 1 0.88275 72 7 0.713774 134 9 0.7815809 173 9 0.877373 411 7 0.854932 368 9 0.8848148 406 7 0.928235 301 7 0.9181321 423 9 0.856183 0.736448 0.828566 0.912948 0.796254 0.916245 0.790378 0.9022458 0.824202 0.8501477 0.8582472 0.740174 0.863685 0.882140 0.853878 0.6154656 0.6956392 0.912113 0.787405 0.9040730 0.655731 0.815037 0.865313 0.722720 0.961693 0.8884791 0.839910 0.94127760 0.7298533 0.875936 0.943593 0.785085 0.746563 0.701489 0.3723407 0.84000625 0.852552 0.862960 0.935453 0.9387459 0.924431 0.9132780 0.940725 6 0.838504 0.823023 0.00476356 9 0.666253 0.601990 0.0642627 1.7786e-01 0.86535412 insignificant 1.0000e+00 1.00000 insignificant 4.3935e-01 0.64387519 insignificant 1.0000000 1.00000 insignificant 1.0402e-02 0.8124115 insignificant 1 insignificant 0.838907 0.720994 0.0986022 9 0.696518 0.635795 0.0607236 1.3954e-03 9.9200e-01 weaklyHypermeth 1.9115e-02 1.0000e+00 weaklyHypermeth 8.2781e-02 9.9259e-01 insignificant 9.9736e-01 1.0000e+00 insignificant 0.1325184 3.2104e-01 insignificant 1.0000e+00 insignificant 0.839713 0.9334730 -0.0823368 7 0.795745 0.879848 -0.08410354 9.9942e-01 2.1011e-04 weaklyHypometh 1.0000e+00 0.075210 weaklyHypometh 9.9467e-01 1.2758e-05 weaklyHypometh 1.0000e+00 0.012758 weaklyHypometh -0.13021968 1.9856e-04 weaklyHypometh 0.03971300 weaklyHypometh 0.823910 0.720994 0.0996015 9 0.656717 0.635795 0.0209219 5.5917e-03 9.8795e-01 weaklyHypermeth 7.4556e-02 1.0000e+00 weaklyHypermeth 7.1724e-02 9.1620e-01 insignificant 8.8548e-01 1.0000e+00 insignificant 0.1221165 3.6219e-01 insignificant 1.0000e+00 insignificant 0.827474 0.9334730 -0.0883701 7 0.802654 0.879848 -0.0771945 9.9982e-01 7.8638e-05 weaklyHypometh 1.0000e+00 0.0262125 weaklyHypometh 9.9968e-01 0.00062925 weaklyHypometh 1.0000e+00 0.49818 insignificant -0.1406216 2.0439e-03 weaklyHypometh 0.2043894 insignificant 0.722222 0.9334730 -0.1861511 7 0.703008 0.879848 -0.1768397 0.9996203 3.1037e-06 weaklyHypometh 1.00000 1.7243e-04 weaklyHypometh 0.9946341 1.5395e-05 weaklyHypometh 1 2.2364e-03 weaklyHypometh -0.262738 0.07777590 insignificant 1.000000 insignificant chr13 22346302 22347302 118618 ENSG00000218538 0.809066 204 5 0.781111 78 5 0.8209231 89 5 0.856092 81 5 0.854762 49 5 0.884712 173 5 0.823737 93 5 0.819328 42 4 0.928950 54 5 0.8337912 72 5 0.812799 129 5 0.758225 63 5 0.821429 47 4 NA 0 0 0.852976 69 5 0.7758242 67 5 0.7617943 65 5 0.892346 101 5 0.832281 94 5 0.845704 163 5 0.6648148 63 2 0.837156 83 4 0.8222526 122 5 0.810110 110 4 1.000000 23 1 0.8384135 101 5 0.669832 100 2 0.6594852 119 3 0.8809524 45 2 0.8609524 66 5 0.8297818 71 5 0.866903 218 5 0.645437 56 4 0.7911111 49 5 0.9095238 58 5 0.79018 61 5 0.687075 151 3 0.8986364 71 5 0.793923 186 5 0.862807 158 5 0.8397939 147 5 0.895522 140 5 0.8702529 204 5 0.784937 0.797206 0.844827 0.816195 0.870687 0.868677 0.864271 0.7470967 0.928124 0.8659768 0.8435787 0.768716 0.824209 NA 0.822462 0.7862078 0.7674142 0.904318 0.885034 0.8301112 0.662120 0.784996 0.820463 0.779101 1.000000 0.8643488 0.664476 0.67388466 0.8018249 0.882635 0.862692 0.853732 0.715818 0.846640 0.9540918 0.74409689 0.651717 0.861214 0.777576 0.8882605 0.883658 0.8994495 0.887915 2 0.834391 0.788582 0.04038155 5 0.830784 0.810041 0.0207430 7.5102e-02 0.46957005 insignificant 1.0000e+00 1.00000 insignificant 4.3377e-01 0.25859697 insignificant 1.0000000 1.00000 insignificant 1.8060e-02 0.5681801 lowCoverage 1 lowCoverage 0.834391 0.755605 0.0736020 5 0.830784 0.772118 0.0586653 3.1342e-03 9.9334e-01 weaklyHypermeth 4.0432e-02 1.0000e+00 weaklyHypermeth 1.9560e-01 9.5739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0427881 3.8070e-01 lowCoverage 1.0000e+00 lowCoverage 0.834391 0.8658683 -0.0220748 5 0.830784 0.847141 -0.01635740 7.3569e-01 1.0740e-01 insignificant 1.0000e+00 1.000000 insignificant 8.4445e-01 7.6970e-02 insignificant 1.0000e+00 1.000000 insignificant -0.02267811 2.9118e-01 lowCoverage 1.00000000 lowCoverage 0.788582 0.755605 0.0327797 5 0.810041 0.772118 0.0379223 6.0384e-02 9.4963e-01 insignificant 6.4929e-01 1.0000e+00 insignificant 1.2827e-01 9.0843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0247276 6.4895e-01 lowCoverage 1.0000e+00 lowCoverage 0.788582 0.8658683 -0.0705841 5 0.810041 0.847141 -0.0371004 9.0628e-01 5.2696e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.5739e-01 0.16074827 insignificant 1.0000e+00 1.00000 insignificant -0.0407386 2.4723e-01 lowCoverage 1.0000000 lowCoverage 0.755605 0.8658683 -0.1009096 5 0.772118 0.847141 -0.0750227 0.9796638 1.2153e-02 weaklyHypometh 1.00000 1.7613e-01 insignificant 0.9628219 1.2780e-01 insignificant 1 1.0000e+00 insignificant -0.065466 0.20988452 lowCoverage 1.000000 lowCoverage chr13 27293764 27294764 118743 GSX1 ENSG00000169840 0.028929 467 6 0.016085 186 6 0.0715580 222 6 0.012226 298 6 0.019063 88 6 0.048809 356 6 0.018621 248 6 0.026471 182 6 0.018576 231 6 0.0060606 210 6 0.059597 218 6 0.019921 243 6 0.021512 179 6 NA 0 0 0.027437 256 6 0.0053763 164 6 0.0198024 259 6 0.016667 375 6 0.030235 138 6 0.011057 318 6 0.0391363 81 6 0.011172 162 6 0.0336866 237 6 0.010417 75 6 0.054487 84 6 0.0180382 330 6 0.065657 101 6 0.0222222 53 5 0.0053763 124 6 0.0157770 287 6 0.0093608 261 6 0.052986 346 6 0.019250 203 6 0.0362319 112 6 0.0000000 251 6 0.13487 85 4 0.000000 63 6 0.0247253 236 6 0.011230 393 6 0.018351 421 6 0.0094915 371 6 0.033800 410 6 0.0338178 353 6 0.030439 0.020284 0.083723 0.018071 0.021141 0.056196 0.027087 0.0361321 0.023298 0.0098527 0.0634863 0.023418 0.022623 NA 0.034137 0.0049558 0.0158437 0.027095 0.037257 0.0153677 0.049442 0.013650 0.033174 0.016934 0.036259 0.0222304 0.074742 0.03612663 0.0087403 0.021595 0.010617 0.068043 0.022834 0.033398 0.0000000 0.12901590 0.000000 0.013644 0.011789 0.0154163 0.014082 0.0344792 0.028078 6 0.030617 0.030360 -0.00067778 6 0.025187 0.026680 -0.0014936 6.7511e-01 0.37282581 insignificant 1.0000e+00 1.00000 insignificant 2.4812e-01 0.52856979 insignificant 1.0000000 1.00000 insignificant -3.0350e-03 0.6750530 insignificant 1 insignificant 0.030617 0.024211 0.0045955 6 0.025187 0.023433 0.0017539 2.9935e-02 5.7715e-01 weaklyHypermeth 3.2318e-01 1.0000e+00 insignificant 2.1697e-02 7.2198e-01 weaklyHypermeth 3.1907e-01 1.0000e+00 insignificant -0.0106885 6.3122e-01 insignificant 1.0000e+00 insignificant 0.030617 0.0184805 0.0119144 6 0.025187 0.022049 0.00313813 1.9883e-01 8.7526e-02 insignificant 1.0000e+00 1.000000 insignificant 2.7370e-01 2.2831e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00381978 5.7845e-01 insignificant 1.00000000 insignificant 0.030360 0.024211 0.0054696 6 0.026680 0.023433 0.0032475 4.3146e-02 8.9459e-01 weaklyHypermeth 4.9030e-01 1.0000e+00 insignificant 9.7908e-02 9.1149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0076535 7.3401e-01 insignificant 1.0000e+00 insignificant 0.030360 0.0184805 0.0109135 6 0.026680 0.022049 0.0046317 2.8049e-01 8.0866e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.6114e-01 0.57191687 insignificant 1.0000e+00 1.00000 insignificant 0.0068548 4.0438e-01 insignificant 1.0000000 insignificant 0.024211 0.0184805 0.0047776 6 0.023433 0.022049 0.0013843 0.9494160 6.1453e-02 insignificant 1.00000 7.3159e-01 insignificant 0.9934000 9.3265e-02 insignificant 1 1.0000e+00 insignificant 0.014508 0.52281722 insignificant 1.000000 insignificant chr13 27301361 27302361 118751 ENSG00000207330 0.000000 135 8 0.015682 184 8 0.0099922 213 8 0.000000 59 4 0.000000 108 8 0.000000 189 8 0.013596 232 8 0.007353 139 8 0.000000 123 8 0.0052083 155 8 0.002907 287 8 0.020139 137 8 0.000000 180 8 NA 0 0 0.000000 269 8 0.0311100 156 8 0.0052083 161 8 0.000000 47 8 0.011634 169 8 0.012500 167 8 0.0281250 93 7 0.025000 47 6 0.0043103 163 8 0.015625 80 8 0.025000 23 3 0.0096873 295 8 0.022817 110 8 0.0156250 56 6 0.0250000 96 8 0.0090012 253 8 0.0083426 209 8 0.026979 256 8 0.000000 98 8 0.0000000 169 8 0.0000000 15 3 0.00000 62 8 0.134177 60 7 0.0083333 152 8 0.000000 164 8 0.006250 218 8 0.0000000 44 4 0.011364 109 8 0.0312500 49 4 0.000000 0.013029 0.011743 0.000000 0.000000 0.000000 0.015733 0.0066059 0.000000 0.0046791 0.0032334 0.015686 0.000000 NA 0.000000 0.0322356 0.0046791 0.000000 0.010510 0.0064171 0.038770 0.022460 0.007376 0.014037 0.027807 0.0093314 0.022409 0.00802139 0.0224599 0.013099 0.011695 0.022223 0.000000 0.000000 0.0266106 0.00000000 0.140778 0.014260 0.000000 0.0032086 0.000000 0.0058337 0.028075 4 0.007717 0.015467 -0.00813449 8 0.007760 0.015191 -0.0074315 8.7366e-01 0.01334826 weaklyHypometh 1.0000e+00 0.78519 insignificant 8.8798e-01 0.00981399 weaklyHypometh 1.0000000 1.00000 insignificant -1.0837e-02 0.0021899 weaklyHypometh 1 insignificant 0.007717 0.019784 -0.0115784 8 0.007760 0.018975 -0.0112149 9.6854e-01 1.9393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5821e-01 4.5850e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0166291 4.8733e-01 insignificant 1.0000e+00 insignificant 0.007717 0.0051370 0.0017575 8 0.007760 0.007268 0.00049195 3.9191e-01 8.1673e-01 insignificant 1.0000e+00 1.000000 insignificant 4.4390e-01 9.6338e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00265014 6.8249e-01 insignificant 1.00000000 insignificant 0.015467 0.019784 -0.0038808 8 0.015191 0.018975 -0.0037834 8.5836e-01 6.0427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2717e-01 8.8532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0057922 8.0486e-01 insignificant 1.0000e+00 insignificant 0.015467 0.0051370 0.0096125 8 0.015191 0.007268 0.0079234 4.9464e-02 9.9851e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 1.1340e-01 0.99919955 insignificant 1.0000e+00 1.00000 insignificant 0.0081867 2.4390e-01 insignificant 1.0000000 insignificant 0.019784 0.0051370 0.0124444 8 0.018975 0.007268 0.0117068 0.5163614 9.9642e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4880053 9.9818e-01 insignificant 1 1.0000e+00 insignificant 0.013979 0.56469125 insignificant 1.000000 insignificant chr13 29908606 29909606 118805 ENSG00000169697 0.747341 68 5 0.642393 37 5 0.9100000 17 2 0.805182 130 5 1.000000 10 1 0.686667 26 2 0.750000 10 0 0.848889 42 5 0.625000 10 1 0.8000000 28 3 0.870583 66 5 NA 0 0 0.764762 30 5 0.733333 16 1 0.916667 6 0 NA 0 0 NA 0 0 0.819255 149 5 0.800000 24 2 0.525000 18 2 1.0000000 8 0 NA 0 0 0.8244444 48 5 1.000000 7 0 1.000000 4 0 0.7000000 26 1 0.900000 13 2 1.0000000 3 0 0.7857143 30 1 0.9044160 74 5 0.6777778 28 2 0.766667 17 1 0.613636 33 4 1.0000000 7 1 0.8000000 19 1 NA 0 0 0.860000 44 4 0.9615385 21 2 0.779762 47 5 0.816667 69 5 0.8918619 139 5 0.733333 45 4 0.8586667 96 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.799127 0.860465 -0.02236140 2 0.796357 0.819113 -0.0227558 9.1258e-01 0.27232578 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.6168e-01 0.19426465 lowCoverage 1.0000000 1.00000 lowCoverage -8.9880e-02 0.0707977 lowCoverage 1 lowCoverage 0.799127 0.814516 0.0329745 1 0.796357 0.769974 0.0263833 1.5241e-01 5.9985e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.1821e-01 6.0885e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0679131 3.9759e-01 lowCoverage 1.0000e+00 lowCoverage 0.799127 0.8232323 -0.0485662 5 0.796357 0.844597 -0.04823962 9.7939e-01 1.6454e-01 insignificant 1.0000e+00 1.000000 insignificant 7.3963e-01 1.8532e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03693621 3.7233e-01 lowCoverage 1.00000000 lowCoverage 0.860465 0.814516 0.0541862 1 0.819113 0.769974 0.0491390 7.4244e-02 9.0969e-01 lowCoverage 7.8151e-01 1.0000e+00 lowCoverage 3.8522e-01 8.4053e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0219668 7.8687e-01 lowCoverage 1.0000e+00 lowCoverage 0.860465 0.8232323 -0.0211646 2 0.819113 0.844597 -0.0254839 8.9312e-01 4.1634e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.0399e-01 0.85619850 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0529437 2.7830e-01 lowCoverage 1.0000000 lowCoverage 0.814516 0.8232323 -0.0795025 1 0.769974 0.844597 -0.0746229 0.9096147 9.2506e-03 lowCoverage 1.00000 1.4920e-01 lowCoverage 0.6573321 4.7131e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.030977 0.69133001 lowCoverage 1.000000 lowCoverage chr13 35192977 35193977 118995 NBEA ENSG00000172915 0.537813 472 9 0.599905 292 9 0.4765248 194 10 0.609838 393 9 0.450278 149 7 0.583725 527 10 0.561909 178 8 0.555654 223 10 0.621222 136 9 0.4641532 130 9 0.629287 349 11 0.560606 48 5 0.621780 156 8 0.428571 47 4 0.442308 128 6 0.5000000 30 2 0.0000000 2 0 0.441954 794 8 0.647681 320 10 0.528199 409 11 0.7528532 62 6 0.684091 78 7 0.4551199 162 9 0.595459 95 7 0.646440 485 9 0.7026162 433 11 0.570090 188 9 0.3888889 18 0 0.6913410 262 10 0.6675237 407 11 0.6847258 514 9 0.592480 383 11 0.337879 270 10 0.3108087 272 9 0.3014493 396 9 0.23443 214 7 0.425691 226 9 0.3304367 424 10 0.408711 501 9 0.540388 374 9 0.5542637 376 7 0.446721 507 4 0.6785368 329 9 0.579961 0.567614 0.557152 0.621195 0.604561 0.690912 0.541169 0.6675289 0.603960 0.5986446 0.6088584 0.511364 0.721563 0.533304 0.620367 0.5954254 NA 0.579395 0.648533 0.5806405 0.753266 0.638979 0.634619 0.666633 0.609251 0.6600765 0.544392 0.69061562 0.5493334 0.621062 0.709870 0.598766 0.111190 0.100929 0.1208827 0.16094554 0.141613 0.171695 0.646065 0.6433047 0.514291 0.5038189 0.694354 4 0.567410 0.649498 -0.03358427 9 0.536995 0.573135 -0.0361400 9.9990e-01 0.00010875 weaklyHypometh 1.0000e+00 0.07189 weaklyHypometh 9.9997e-01 0.00018387 weaklyHypometh 1.0000000 0.18387 insignificant -1.0623e-01 0.0223153 weaklyHypometh 1 insignificant 0.567437 0.177580 0.4157522 10 0.539841 0.361806 0.1780352 7.4012e-43 1.5047e-02 hypermethylated 2.4671e-40 1.0000e+00 hypermethylated 1.3347e-07 1.5097e-01 hypermethylated 8.3419e-06 1.0000e+00 hypermethylated 0.1896209 1.3907e-04 weaklyHypermeth 7.3194e-03 weaklyHypermeth 0.567437 0.5122185 0.0259168 9 0.539841 0.512251 0.02759021 1.3917e-01 8.9032e-01 insignificant 1.0000e+00 1.000000 insignificant 7.7077e-01 4.8933e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01265382 8.2851e-01 insignificant 1.00000000 insignificant 0.649708 0.177580 0.4721237 9 0.617223 0.361806 0.2554167 4.2390e-35 7.3940e-01 hypermethylated 8.4779e-33 1.0000e+00 hypermethylated 1.0786e-10 9.6007e-01 hypermethylated 1.3483e-08 1.0000e+00 hypermethylated 0.2958529 1.8420e-06 hypermethylated 1.5350e-04 hypermethylated 0.649708 0.5122185 0.0537850 9 0.617223 0.512251 0.1049717 2.6805e-03 9.9515e-01 weaklyHypermeth 8.9350e-02 1.0000000 weaklyHypermeth 1.5120e-01 0.99711585 insignificant 1.0000e+00 1.00000 insignificant 0.0935782 1.3652e-01 insignificant 1.0000000 insignificant 0.177580 0.5122185 -0.4399817 9 0.361806 0.512251 -0.1504450 0.5163526 3.4041e-14 hypomethylated 1.00000 8.5104e-12 hypomethylated 0.8512649 4.6872e-05 hypomethylated 1 5.8590e-03 hypomethylated -0.202275 0.00850630 weaklyHypometh 0.340252 insignificant chr13 35283659 35284659 119011 NBEA ENSG00000172915 0.72312 82 5 0.55807 75 3 0.70381 30 3 0.73547 75 3 0.47778 27 3 0.74286 59 5 0.59206 32 3 0.61801 63 5 0.75000 20 1 0.77905 33 5 0.72173 88 5 0.75000 12 0 0.67879 69 5 0.58000 32 5 0.63016 40 5 0.29167 7 0 0.88667 30 2 0.79455 63 4 0.58889 33 3 0.72522 46 5 0.54667 18 2 0.86667 13 0 0.60848 33 5 0.84000 28 4 0.73778 27 3 0.74444 68 3 0.77778 35 3 0.75000 6 0 0.68770 50 5 0.59298 56 3 0.65418 61 3 0.69091 35 3 0.55810 71 5 0.72500 37 5 0.47881 73 5 0.58333 6 0 0.54345 32 2 0.69613 56 5 0.71274 82 5 0.70909 48 3 0.74976 67 5 0.78064 56 3 0.75033 74 5 0.73882 0.62200 0.71201 0.78440 0.52525 0.79221 0.62969 0.66212 0.80682 0.79329 0.75113 0.82955 0.71364 0.61515 0.67352 0.66894 0.92273 0.79438 0.66162 0.74743 0.55455 0.90909 0.65076 0.89091 0.78586 0.75838 0.70020 0.68511 0.74378 0.68182 0.68630 0.72934 0.58506 0.77557 0.55373 0.65962 0.57163 0.73782 0.74376 0.75413 0.78815 0.81172 0.81466 0 0.73690 0.76512 -0.00485773 3 0.69649 0.68465 0.011838 0.60159 0.5048961 lowCoverage 1 1 lowCoverage 0.80540 0.39341 lowCoverage 1 1 lowCoverage -0.0417375 0.31167 lowCoverage 1 lowCoverage 0.73690 0.64000 0.101813 5 0.69649 0.59392 0.1025729 1.2553e-05 0.79102 weaklyHypermeth 8.9664e-04 1 weaklyHypermeth 0.00091191 0.83431 weaklyHypermeth 0.086231 1 weaklyHypermeth 0.068924 0.181412 lowCoverage 1 lowCoverage 0.73690 0.80428 -0.046852 5 0.69649 0.74523 -0.0487456 8.7779e-01 4.1649e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 7.5155e-01 0.09462082 insignificant 1.00000000 1.00000 insignificant -0.0741173 0.03024069 lowCoverage 1.00000 lowCoverage 0.76512 0.64000 0.098103 3 0.68465 0.59392 0.090734 9.5362e-04 0.79316 lowCoverage 5.2979e-02 1 lowCoverage 1.5230e-02 0.90008 lowCoverage 0.8015705 1 lowCoverage 0.110662 0.042118 lowCoverage 1 lowCoverage 0.76512 0.80428 -0.055213 3 0.68465 0.74523 -0.060584 8.9724e-01 8.0560e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.2778e-01 1.8198e-01 lowCoverage 1.00000000 1.000000 lowCoverage -0.0323798 0.3148167 lowCoverage 1.00000 lowCoverage 0.64000 0.80428 -0.152111 5 0.59392 0.74523 -0.151319 0.999963 4.0209e-04 weaklyHypometh 1 4.3793e-02 weaklyHypometh 0.999958 6.4388e-03 weaklyHypometh 1 0.664630 insignificant -0.143041 0.0122952 lowCoverage 1 lowCoverage chr13 37007364 37008364 119058 ENSG00000218218 0.71545 110 5 0.66673 92 5 0.56548 36 5 0.61837 89 5 0.84273 76 5 0.61036 62 6 0.45063 60 5 0.75076 64 5 0.74444 20 2 0.70000 29 3 0.69457 132 5 0.60000 15 2 0.63690 80 5 0.76190 41 2 0.65455 25 2 0.57143 20 2 NA 0 0 0.65961 170 5 0.73506 40 3 0.74281 62 5 0.55000 14 0 0.80000 10 0 0.61389 65 5 0.63571 28 3 0.82519 98 5 0.53579 75 5 0.69048 40 5 0.40000 9 0 0.64238 62 2 0.72646 82 5 0.60833 41 4 0.84721 48 5 0.70114 91 5 0.57407 76 5 0.70444 36 4 1.00000 2 0 0.61944 43 3 0.48016 34 5 0.46429 65 2 0.64421 91 5 0.68033 120 5 0.71429 42 2 0.82681 94 5 0.72662 0.70408 0.71318 0.70613 0.72643 0.68178 0.72315 0.75597 0.80155 0.73754 0.66772 0.60465 0.72028 0.77076 0.61311 0.75581 NA 0.76604 0.56575 0.63794 0.76744 0.75581 0.73798 0.63621 0.71438 0.67802 0.63206 0.38643 0.75484 0.74289 0.45116 0.83666 0.67769 0.54522 0.66977 0.90894 0.50969 0.39424 0.60797 0.74057 0.74102 0.72099 0.77355 0 0.70237 0.72552 -0.01754199 5 0.72011 0.56495 0.155164 0.99994 0.8462124 insignificant 1 1 insignificant 0.93760 0.99184 insignificant 1 1 insignificant 0.0132819 0.76093 lowCoverage 1 lowCoverage 0.70569 0.61702 0.089611 5 0.69913 0.61271 0.0864233 1.4167e-03 0.87103 weaklyHypermeth 6.4396e-02 1 weaklyHypermeth 0.04746251 0.92284 weaklyHypermeth 1.000000 1 insignificant -0.010309 0.895977 lowCoverage 1 lowCoverage 0.70074 0.72816 -0.033207 5 0.60768 0.60125 0.0064354 7.7938e-01 4.1385e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.8230e-01 0.71846793 insignificant 1.00000000 1.00000 insignificant 0.0035823 0.95647846 lowCoverage 1.00000 lowCoverage 0.72872 0.61702 0.109714 5 0.72405 0.61271 0.111347 3.6238e-03 0.98715 weaklyHypermeth 1.6472e-01 1 insignificant 1.1238e-01 0.99132 insignificant 1.0000000 1 insignificant -0.023591 0.780682 lowCoverage 1 lowCoverage 0.72840 0.72816 -0.017148 5 0.66804 0.60125 0.066795 6.7167e-01 8.6594e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.7780e-01 7.6002e-01 insignificant 1.00000000 1.000000 insignificant -0.0096996 0.8934664 lowCoverage 1.00000 lowCoverage 0.61702 0.72927 -0.125436 5 0.61271 0.63499 -0.022287 0.939508 7.8304e-03 weaklyHypometh 1 4.6061e-01 insignificant 0.966232 7.2600e-02 insignificant 1 1.000000 insignificant 0.013891 0.8852708 lowCoverage 1 lowCoverage chr13 42120908 42121908 119237 TNFSF11 ENSG00000120659 0.87661 100 5 0.63549 62 5 0.55000 32 5 0.77512 152 5 0.61224 65 5 0.79658 134 5 0.68636 33 4 0.76672 106 5 0.78912 43 5 0.75616 51 5 0.74388 195 5 0.69048 27 4 0.86442 56 5 0.80000 32 3 0.69481 65 5 0.50000 9 0 0.79167 13 0 0.88358 121 5 0.68424 72 5 0.76908 76 5 0.62500 18 0 0.70774 40 5 0.84848 67 5 0.71333 31 4 0.79111 49 5 0.73824 84 5 0.82856 67 5 0.85714 7 1 0.82444 38 5 0.72679 96 5 0.81867 75 5 0.59717 167 5 0.51194 58 5 0.44907 58 5 0.54692 110 5 1.00000 1 0 0.63214 38 5 0.67059 98 5 0.92619 51 5 0.70098 99 5 0.84788 125 5 0.77143 37 5 0.67560 111 5 0.88214 0.63247 0.55272 0.76938 0.65528 0.79221 0.64476 0.76633 0.69481 0.75318 0.74483 0.70005 0.86145 0.72011 0.77431 0.46196 0.76359 0.78807 0.67615 0.77334 0.76359 0.84596 0.81522 0.69547 0.79336 0.74105 0.76569 NA 0.81751 0.73048 0.79022 0.70775 0.61554 0.54952 0.65937 NA 0.63703 0.67231 0.89306 0.84065 0.78905 0.77252 0.81457 0 0.75469 0.75507 -0.00071101 5 0.75590 0.74033 0.015575 0.45268 0.6726618 insignificant 1 1 insignificant 0.90813 0.14488 insignificant 1 1 insignificant -0.0230636 0.50142 lowCoverage 1 lowCoverage 0.75487 0.62810 0.126073 5 0.77078 0.52161 0.2491629 1.8901e-07 1.00000 weaklyHypermeth 1.7182e-05 1 weaklyHypermeth 0.00061767 0.99963 weaklyHypermeth 0.077208 1 weaklyHypermeth 0.098215 0.283713 lowCoverage 1 lowCoverage 0.75522 0.81560 -0.062204 5 0.80352 0.79666 0.0068605 9.2878e-01 2.3438e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.7549e-01 0.01739910 weaklyHypometh 1.00000000 1.00000 insignificant -0.0510887 0.36127865 lowCoverage 1.00000 lowCoverage 0.75441 0.62810 0.127406 5 0.69705 0.52161 0.175437 2.5340e-07 0.99982 weaklyHypermeth 2.5340e-05 1 weaklyHypermeth 1.6742e-05 0.99996 weaklyHypermeth 0.0033485 1 weaklyHypermeth 0.121279 0.197936 lowCoverage 1 lowCoverage 0.75441 0.81473 -0.063381 5 0.69705 0.76277 -0.065722 9.7226e-01 2.6199e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 8.3955e-01 4.2620e-02 weaklyHypometh 1.00000000 1.000000 insignificant -0.0280251 0.6124790 lowCoverage 1.00000 lowCoverage 0.62810 0.81473 -0.192904 5 0.52161 0.76277 -0.241159 1.000000 1.1664e-08 weaklyHypometh 1 9.9976e-06 weaklyHypometh 1.000000 3.0677e-05 weaklyHypometh 1 0.015338 weaklyHypometh -0.149304 0.1459655 lowCoverage 1 lowCoverage chr13 43266171 43267171 119361 ENOX1 ENSG00000120658 0.81263 536 18 0.73692 410 17 0.77741 175 17 0.82502 316 15 0.84449 136 14 0.75587 434 18 0.81786 151 16 0.78855 311 18 0.74665 154 9 0.76651 221 18 0.77815 586 18 0.75404 145 12 0.83829 331 17 0.81305 54 6 0.82647 250 18 0.66450 122 8 0.76772 76 8 0.83142 296 17 0.78789 366 18 0.84978 407 18 0.80705 115 13 0.72627 117 9 0.79144 330 18 0.70971 95 7 0.84561 73 9 0.80128 510 18 0.81763 204 13 0.78542 50 4 0.79360 329 18 0.77392 475 18 0.81355 441 18 0.83421 635 18 0.70888 329 18 0.69849 286 18 0.76865 384 18 0.82810 122 8 0.69771 114 12 0.81126 491 14 0.82898 348 16 0.87213 497 18 0.83572 301 15 0.86082 491 13 0.83519 383 15 0.80982 0.70428 0.79325 0.82291 0.86334 0.74194 0.80025 0.77924 0.77468 0.76867 0.77939 0.76741 0.81395 0.77256 0.83670 0.67954 0.77963 0.81060 0.77938 0.83541 0.77334 0.74174 0.78796 0.72766 0.84955 0.77997 0.83036 0.75112 0.77928 0.80261 0.80067 0.81775 0.64566 0.65839 0.74877 0.79852 0.72302 0.78918 0.81724 0.87213 0.82040 0.83638 0.80524 4 0.80665 0.84292 -0.01226062 18 0.81142 0.82894 -0.017516 0.98623 0.2319250 insignificant 1 1 insignificant 0.97562 0.58441 insignificant 1 1 insignificant -0.0024821 0.87295 insignificant 1 insignificant 0.80658 0.79200 0.044668 18 0.80199 0.78429 0.0176969 2.2128e-05 0.96076 weaklyHypermeth 1.4752e-03 1 weaklyHypermeth 0.00366029 0.99718 weaklyHypermeth 0.281561 1 insignificant 0.036979 0.199200 insignificant 1 insignificant 0.80665 0.81386 -0.048017 18 0.81142 0.86584 -0.0544189 1.0000e+00 1.7004e-03 weaklyHypometh 1.0000e+00 0.44042596 insignificant 1.0000e+00 0.00326201 weaklyHypometh 1.00000000 0.87599 insignificant -0.0574106 0.00044756 weaklyHypometh 0.14919 insignificant 0.84278 0.79200 0.057032 18 0.82038 0.78429 0.036088 4.4428e-06 0.99889 weaklyHypermeth 3.4176e-04 1 weaklyHypermeth 1.3937e-03 0.99858 weaklyHypermeth 0.1266981 1 insignificant 0.039461 0.179349 insignificant 1 insignificant 0.84292 0.81386 -0.036005 18 0.82894 0.86584 -0.036903 9.9998e-01 1.3931e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9998e-01 9.2140e-02 insignificant 1.00000000 1.000000 insignificant -0.0549285 0.0016643 weaklyHypometh 0.33285 insignificant 0.79200 0.81368 -0.093956 18 0.78429 0.85913 -0.074837 1.000000 5.7357e-08 weaklyHypometh 1 1.9119e-05 weaklyHypometh 1.000000 1.8603e-05 weaklyHypometh 1 0.015338 weaklyHypometh -0.094389 0.0093776 weaklyHypometh 1 insignificant chr13 45648652 45649652 119450 ENSG00000222074 0.72247 141 8 0.59679 94 6 0.58396 46 6 0.73692 186 8 0.71429 30 2 0.68642 171 8 0.74167 42 6 0.68772 166 8 0.74895 65 6 0.67719 76 8 0.67733 196 8 0.45833 18 0 0.72049 93 8 0.71607 40 6 0.71472 96 6 0.45893 24 2 1.00000 6 0 0.69952 145 8 0.91388 84 6 0.76237 194 8 0.53307 32 2 0.58576 62 6 0.69155 94 6 0.71477 57 6 0.76811 49 6 0.63807 92 6 0.74330 88 7 0.65714 22 2 0.72101 83 8 0.67875 167 8 0.79619 94 8 0.72105 215 6 0.65430 120 8 0.57626 74 6 0.69169 106 6 0.83333 15 0 0.64552 85 6 0.61874 114 8 0.81366 117 8 0.72158 165 8 0.66049 126 8 0.64512 93 6 0.72832 105 8 0.80233 0.61858 0.63622 0.81138 0.66547 0.73518 0.79113 0.81468 0.81210 0.75580 0.82026 0.45889 0.77598 0.75601 0.76250 0.46269 0.86466 0.75226 0.87786 0.79193 0.67489 0.72762 0.73699 0.76167 0.80981 0.72823 0.80773 0.78239 0.73678 0.70813 0.87164 0.77572 0.74517 0.60518 0.72818 0.88969 0.67134 0.68181 0.85762 0.78162 0.75291 0.73595 0.79868 2 0.75431 0.75924 0.00192968 6 0.69908 0.66562 0.033454 0.90782 0.8295787 insignificant 1 1 insignificant 0.88152 0.82360 insignificant 1 1 insignificant 0.0135024 0.70296 insignificant 1 insignificant 0.75406 0.69066 0.071531 6 0.66564 0.67819 -0.0125543 6.5483e-04 0.98897 weaklyHypermeth 3.6380e-02 1 weaklyHypermeth 0.19748828 0.96418 insignificant 1.000000 1 insignificant 0.030926 0.510528 insignificant 1 insignificant 0.75497 0.76568 -0.013443 7 0.73971 0.74219 -0.0024778 8.8173e-01 7.3287e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.8085e-01 0.53430774 insignificant 1.00000000 1.00000 insignificant -0.0129340 0.75568033 insignificant 1.00000 insignificant 0.75996 0.69066 0.066406 6 0.73958 0.67819 0.061386 5.9308e-03 0.99980 weaklyHypermeth 2.3723e-01 1 insignificant 1.4483e-01 0.99937 insignificant 1.0000000 1 insignificant 0.017423 0.689919 insignificant 1 insignificant 0.75901 0.76568 -0.015961 6 0.62847 0.74219 -0.113723 8.8321e-01 6.2829e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.0773e-01 4.7841e-01 insignificant 1.00000000 1.000000 insignificant -0.0264364 0.4927932 insignificant 1.00000 insignificant 0.69006 0.76529 -0.093436 6 0.63797 0.70997 -0.071997 0.989124 1.2624e-03 weaklyHypometh 1 1.0520e-01 insignificant 0.975104 5.9519e-02 insignificant 1 1.000000 insignificant -0.043860 0.3746982 insignificant 1 insignificant chr13 47357374 47358374 119482 ENSG00000217434 0.89713 89 6 0.64193 124 6 0.63265 46 5 0.75768 95 6 0.54345 41 6 0.71834 192 7 0.68776 39 5 0.60807 98 4 0.61429 28 4 0.73265 49 6 0.76935 148 6 0.64286 8 0 0.86243 74 6 0.71429 32 4 0.84249 64 6 0.55556 6 0 1.00000 4 0 0.66880 127 6 0.72302 50 2 0.65799 199 6 0.92857 36 5 0.85244 66 6 0.57849 52 6 0.54675 41 5 0.77222 44 5 0.72421 75 6 0.84308 103 6 0.82952 26 2 0.74454 58 6 0.79011 98 6 0.73838 92 6 0.77256 216 7 0.68396 71 7 0.61264 66 6 0.76421 103 7 0.72222 18 0 0.59002 96 6 0.69038 83 6 0.60750 66 6 0.82456 94 6 0.92275 126 6 0.87778 62 4 0.79323 119 6 0.87300 0.67743 0.69425 0.87856 0.71772 0.74181 0.62976 0.69283 0.54778 0.85730 0.89223 0.73889 0.85944 0.82222 0.80584 0.76198 0.95282 0.83625 0.65988 0.76701 0.91944 0.84917 0.66459 0.63333 0.77093 0.71204 0.78049 0.80388 0.73465 0.74677 0.85590 0.79356 0.74369 0.69758 0.82518 0.72593 0.68257 0.79371 0.61218 0.81653 0.90456 0.86963 0.83275 0 0.77631 0.79162 -0.00230107 6 0.63022 0.78454 -0.154323 0.88917 0.5684155 insignificant 1 1 insignificant 0.67575 0.76537 insignificant 1 1 insignificant -0.0465358 0.26503 lowCoverage 1 lowCoverage 0.77734 0.71625 0.061144 6 0.72025 0.66277 0.0574874 1.4688e-02 0.93605 weaklyHypermeth 4.6794e-01 1 insignificant 0.10020913 0.84173 insignificant 1.000000 1 insignificant 0.036296 0.346596 lowCoverage 1 lowCoverage 0.77734 0.82227 -0.048985 6 0.72025 0.79822 -0.0779714 9.9640e-01 5.9189e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8913e-01 0.12171835 insignificant 1.00000000 1.00000 insignificant -0.0916281 0.17824524 lowCoverage 1.00000 lowCoverage 0.79139 0.71625 0.064382 6 0.75377 0.66277 0.091000 5.3355e-03 0.94762 weaklyHypermeth 2.2231e-01 1 insignificant 1.4618e-01 0.84017 insignificant 1.0000000 1 insignificant 0.082832 0.063159 insignificant 1 insignificant 0.79139 0.82227 -0.048929 6 0.75377 0.79822 -0.044459 9.8597e-01 7.5471e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8849e-01 6.5742e-02 insignificant 1.00000000 1.000000 insignificant -0.0450923 0.4952757 insignificant 1.00000 insignificant 0.71625 0.82227 -0.112830 6 0.66277 0.79822 -0.135459 0.990703 1.8566e-03 weaklyHypometh 1 1.3786e-01 insignificant 0.976386 5.6738e-03 weaklyHypometh 1 0.664630 insignificant -0.127925 0.0793275 insignificant 1 insignificant chr13 52267770 52268770 119643 LECT1 ENSG00000136110 0.66872 257 6 0.72479 150 7 0.73685 129 6 0.80065 130 6 0.73062 277 6 0.78539 413 6 0.77786 245 6 0.73979 270 6 0.62481 227 6 0.66135 217 6 0.71492 407 6 0.70415 215 5 0.72690 347 6 0.68750 16 2 0.73866 301 6 0.66432 173 5 0.43818 193 5 0.72455 167 6 0.75677 381 6 0.63202 292 6 0.71820 95 6 0.67710 112 6 0.76957 148 7 0.70312 122 6 0.63942 72 6 0.74715 286 7 0.73302 114 6 0.81034 72 6 0.72285 318 6 0.72331 328 6 0.68945 256 7 0.76241 354 6 0.60169 171 7 0.67280 218 6 0.72717 239 7 0.77170 62 5 0.71377 128 6 0.64242 278 7 0.83725 230 6 0.79039 232 6 0.71416 233 6 0.80601 214 6 0.82145 248 6 0.82143 0.68049 0.67505 0.76214 0.70877 0.74604 0.76087 0.71493 0.60613 0.64852 0.70728 0.69852 0.70034 0.68869 0.73293 0.63667 0.53579 0.83768 0.73174 0.75614 0.71343 0.67745 0.83214 0.70014 0.63005 0.73090 0.77225 0.76274 0.71325 0.70751 0.69236 0.73177 0.62173 0.66748 0.67779 0.78409 0.68872 0.65651 0.82963 0.79764 0.83353 0.83125 0.82878 6 0.67464 0.70487 -0.01473109 6 0.64756 0.72254 -0.074976 0.41105 0.0861457 insignificant 1 1 insignificant 0.80673 0.13742 insignificant 1 1 insignificant -0.0227212 0.30757 insignificant 1 insignificant 0.67506 0.66515 0.037547 6 0.74007 0.66690 0.0731638 1.9369e-03 0.98290 weaklyHypermeth 8.1964e-02 1 weaklyHypermeth 0.07626361 0.94578 insignificant 1.000000 1 insignificant 0.013682 0.664519 insignificant 1 insignificant 0.67464 0.83665 -0.121464 6 0.64756 0.73506 -0.0874989 9.9659e-01 6.6282e-07 weaklyHypometh 1.0000e+00 0.00066282 weaklyHypometh 9.9826e-01 0.00018502 weaklyHypometh 1.00000000 0.09251 weaklyHypometh -0.0919120 0.00750560 weaklyHypometh 0.75175 insignificant 0.70480 0.66515 0.048484 6 0.71861 0.66690 0.051708 9.1825e-03 0.99827 weaklyHypermeth 3.4009e-01 1 insignificant 9.1895e-02 0.99326 insignificant 1.0000000 1 insignificant 0.036403 0.235819 insignificant 1 insignificant 0.70487 0.83665 -0.111550 6 0.72254 0.73506 -0.012523 9.7406e-01 3.3391e-07 weaklyHypometh 1.0000e+00 0.00033391 weaklyHypometh 9.8906e-01 8.9244e-05 weaklyHypometh 1.00000000 0.044622 weaklyHypometh -0.0691909 0.0274270 weaklyHypometh 1.00000 insignificant 0.66515 0.83737 -0.158113 6 0.66690 0.84007 -0.173163 0.999994 1.9995e-08 weaklyHypometh 1 9.9976e-06 weaklyHypometh 0.999989 6.5968e-05 weaklyHypometh 1 0.021989 weaklyHypometh -0.105594 0.0108896 weaklyHypometh 1 insignificant chr13 52329324 52330324 119651 PCDH8 ENSG00000136099 0.81541 290 4 0.83657 139 5 1.00000 34 4 0.93031 168 4 0.94333 44 4 0.76407 237 4 0.85893 68 5 0.94190 85 5 0.83000 24 4 0.95000 20 1 0.94256 151 5 0.60000 9 0 0.63889 36 3 0.96970 33 3 0.90364 33 3 1.00000 2 0 NA 0 0 0.35979 616 3 0.89686 135 3 0.82854 182 4 0.92857 42 3 0.56667 17 0 0.92619 57 4 0.94213 40 4 0.90635 124 4 0.97002 101 5 0.86786 95 5 0.90000 19 0 0.85412 106 3 0.97231 107 5 0.82859 122 5 0.77281 185 4 0.67674 103 5 0.50392 121 4 0.79200 45 4 0.94286 24 2 0.66820 108 5 0.66190 136 4 0.29440 269 5 0.76611 178 4 0.42508 207 4 0.60000 319 3 0.67512 187 5 0.88955 0.87687 1.00000 0.88759 0.96989 0.88297 0.96947 0.90630 0.92500 0.91935 0.95451 0.50806 0.64466 0.96480 0.84457 0.87089 NA 0.58031 0.93580 0.90453 0.92567 0.65860 0.90649 0.92630 0.88726 0.97354 0.95713 0.83871 0.76471 0.96712 0.81593 0.96555 0.72220 0.39906 0.58230 0.99539 0.68191 0.79032 0.30145 0.71213 0.43876 0.59922 0.62071 0 0.81909 0.90237 -0.07956761 4 0.83747 0.90246 -0.064994 0.99281 0.0072663 lowCoverage 1 1 lowCoverage 0.65957 0.48847 lowCoverage 1 1 lowCoverage -0.0269766 0.58595 lowCoverage 1 lowCoverage 0.81909 0.67164 0.156011 4 0.83747 0.69829 0.1391778 7.8389e-04 0.99953 lowCoverage 4.1257e-02 1 lowCoverage 0.00477613 0.99937 lowCoverage 0.298123 1 lowCoverage 0.135055 0.087379 lowCoverage 1 lowCoverage 0.81909 0.52845 0.290620 4 0.83747 0.54828 0.2891879 4.6203e-10 1.0000e+00 lowCoverage 6.6091e-08 1.00000000 lowCoverage 5.6464e-07 0.99999994 lowCoverage 0.00018821 1.00000 lowCoverage 0.2905177 0.02251936 lowCoverage 1.00000 lowCoverage 0.90237 0.67164 0.230570 5 0.90246 0.69829 0.204172 5.2967e-07 1.00000 hypermethylated 4.8152e-05 1 hypermethylated 3.0681e-03 0.99991 weaklyHypermeth 0.2426985 1 insignificant 0.162032 0.045043 lowCoverage 1 lowCoverage 0.90237 0.52845 0.368404 5 0.90246 0.54828 0.354182 9.3276e-15 1.0000e+00 hypermethylated 9.3276e-12 1.00000000 hypermethylated 1.4931e-07 1.0000e+00 hypermethylated 0.00014931 1.000000 hypermethylated 0.3174943 0.0166570 lowCoverage 1.00000 lowCoverage 0.67164 0.52845 0.135101 5 0.69829 0.54828 0.150010 0.026504 9.9608e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.053695 9.9376e-01 insignificant 1 1.000000 insignificant 0.155463 0.1774811 lowCoverage 1 lowCoverage chr13 53255396 53256396 119881 ENSG00000220990 0.84934 174 5 0.82204 121 5 0.69681 75 5 0.90132 112 5 1.00000 6 0 0.88646 217 5 0.90000 14 1 0.91463 159 6 0.66071 25 3 0.78061 37 4 0.89341 239 6 0.75000 4 0 0.88556 150 5 0.79487 39 3 0.93333 46 4 0.50000 4 0 0.37500 5 0 0.79535 228 5 0.95338 179 5 0.84670 146 5 0.85582 63 5 0.65042 70 5 0.93333 53 4 1.00000 49 5 0.91667 35 3 0.87151 193 5 0.92595 129 5 0.60714 18 1 0.91409 225 5 0.94472 207 5 0.92312 208 5 0.88104 175 5 0.60911 100 6 0.55831 88 5 0.97168 198 4 0.58333 8 0 0.68853 62 3 0.86894 179 5 0.38610 144 5 0.81487 146 5 0.78706 114 6 0.62600 62 5 0.63421 130 5 0.75840 0.79275 0.66882 0.86574 0.98732 0.89215 0.89744 0.89049 0.61644 0.83700 0.90937 0.62835 0.89976 0.78219 0.90598 0.56164 0.30769 0.77854 0.90947 0.86151 0.81766 0.59545 0.92821 1.00000 0.94017 0.88384 0.85335 0.42308 0.88763 0.95558 0.87937 0.84497 0.65842 0.53157 0.96713 0.51282 0.63315 0.91253 0.30058 0.83032 0.74484 0.59731 0.55156 0 0.84234 0.86316 -0.02211924 5 0.86048 0.89054 -0.030055 0.97093 0.0785309 insignificant 1 1 insignificant 0.97182 0.15583 insignificant 1 1 insignificant -0.0616745 0.21299 lowCoverage 1 lowCoverage 0.84234 0.77480 0.071563 5 0.86048 0.73708 0.1234050 1.0841e-05 0.99085 weaklyHypermeth 8.3389e-04 1 weaklyHypermeth 0.01160061 0.98821 weaklyHypermeth 0.610559 1 insignificant 0.093659 0.260971 lowCoverage 1 lowCoverage 0.84234 0.54027 0.281315 5 0.86048 0.65546 0.2050238 8.4276e-12 9.3896e-01 hypermethylated 2.1069e-09 1.00000000 hypermethylated 3.8068e-05 0.97248757 hypermethylated 0.00543825 1.00000 hypermethylated 0.1573312 0.11132203 lowCoverage 1.00000 lowCoverage 0.86316 0.77480 0.088495 5 0.89054 0.73708 0.153460 6.0937e-05 0.99959 weaklyHypermeth 4.0625e-03 1 weaklyHypermeth 7.1875e-03 0.99942 weaklyHypermeth 0.4791657 1 insignificant 0.155334 0.080932 lowCoverage 1 lowCoverage 0.86316 0.54027 0.315795 5 0.89054 0.65546 0.235079 1.1479e-09 9.8844e-01 hypermethylated 2.8697e-07 1.00000000 hypermethylated 3.2206e-05 9.9340e-01 hypermethylated 0.00805150 1.000000 hypermethylated 0.2190056 0.0416800 lowCoverage 1.00000 lowCoverage 0.77480 0.54027 0.221922 5 0.73708 0.65546 0.081619 0.036450 6.6365e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.502789 6.9273e-01 insignificant 1 1.000000 insignificant 0.063672 0.5522942 lowCoverage 1 lowCoverage chr13 53844819 53845819 119952 ENSG00000220990 0.76847 254 6 0.53458 181 6 0.60572 92 6 0.72972 139 6 0.70004 64 6 0.64596 486 6 0.69025 118 6 0.76130 117 6 0.80043 102 4 0.67685 91 3 0.71879 218 6 0.59673 54 3 0.81778 137 6 0.67857 30 4 0.59488 112 6 0.86905 55 3 0.87500 54 3 0.65481 163 6 0.81910 143 6 0.71870 243 6 0.65205 43 2 0.69369 98 6 0.66521 108 3 0.80333 84 3 0.76167 74 5 0.75727 189 6 0.64336 109 6 0.64550 66 3 0.67146 138 6 0.74031 210 6 0.68452 186 6 0.61437 422 6 0.58720 140 6 0.59918 124 6 0.68301 109 6 0.65470 30 3 0.72416 101 3 0.71618 220 6 0.75747 244 6 0.72427 209 6 0.70051 213 6 0.59178 174 4 0.68637 203 6 0.77977 0.57876 0.69440 0.79087 0.78767 0.66752 0.77883 0.75223 0.79419 0.80561 0.79156 0.77032 0.84244 0.78763 0.83808 0.86831 0.91216 0.71821 0.73599 0.74781 0.51892 0.66873 0.84892 0.75248 0.73831 0.70438 0.64736 0.79129 0.64104 0.76009 0.71697 0.77212 0.65254 0.63681 0.60827 0.61709 0.71050 0.66437 0.80733 0.77605 0.78717 0.82433 0.74772 3 0.72871 0.72669 0.00554392 6 0.64883 0.68671 -0.037886 0.87109 0.4825524 insignificant 1 1 insignificant 0.30561 0.54426 insignificant 1 1 insignificant 0.0184429 0.49823 lowCoverage 1 lowCoverage 0.72871 0.66160 0.077937 6 0.64883 0.65724 -0.0084187 6.8202e-03 0.89852 weaklyHypermeth 2.4358e-01 1 insignificant 0.00427507 0.71435 weaklyHypermeth 0.298123 1 insignificant 0.052095 0.122680 insignificant 1 insignificant 0.72871 0.76127 -0.041813 6 0.64883 0.66967 -0.0208460 6.6656e-01 1.4845e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.0614e-01 0.35074987 insignificant 1.00000000 1.00000 insignificant 0.0207559 0.56600939 insignificant 1.00000 insignificant 0.72669 0.66160 0.075408 6 0.68671 0.65724 0.029467 3.1013e-03 0.92079 weaklyHypermeth 1.4768e-01 1 insignificant 1.2504e-02 0.62179 weaklyHypermeth 0.6946472 1 insignificant 0.033653 0.272813 lowCoverage 1 lowCoverage 0.72669 0.76127 -0.046462 6 0.68671 0.66967 0.017040 6.5339e-01 1.4525e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.4017e-01 1.6169e-01 insignificant 1.00000000 1.000000 insignificant 0.0023130 0.9451971 lowCoverage 1.00000 lowCoverage 0.66160 0.76127 -0.107489 6 0.65724 0.66967 -0.012427 0.773311 4.1986e-05 weaklyHypometh 1 5.2482e-03 weaklyHypometh 0.745033 2.5518e-04 weaklyHypometh 1 0.063794 weaklyHypometh -0.031340 0.4148389 insignificant 1 insignificant chr13 54282124 54283124 119986 ENSG00000136149 0.80321 463 14 0.75848 125 14 0.88644 122 11 0.89999 287 14 0.78243 91 8 0.79951 355 14 0.90303 109 10 0.75292 120 11 0.65858 70 7 0.78866 86 7 0.80434 257 15 0.92427 70 6 0.80097 105 9 NA 0 0 0.84588 106 11 0.75765 69 8 0.75048 51 4 0.79487 407 14 0.81015 141 12 0.87379 300 14 0.71923 30 2 0.81981 141 11 0.86789 262 14 0.89158 65 8 0.87302 98 8 0.85431 232 14 0.79215 129 10 0.68241 55 6 0.84932 124 9 0.88820 222 13 0.84033 225 13 0.85166 447 14 0.83376 152 9 0.78570 94 8 0.75400 279 14 0.83761 75 8 0.58185 47 5 0.74748 213 12 0.82358 359 14 0.88386 453 14 0.87155 359 14 0.87112 327 11 0.89267 375 14 0.88200 0.87236 0.91363 0.95087 0.91484 0.83638 0.83969 0.80483 0.81721 0.89062 0.84468 0.88821 0.85991 NA 0.92883 0.80812 0.81296 0.81307 0.88220 0.94002 0.82305 0.86239 0.91090 0.92084 0.86886 0.89101 0.82716 0.92150 0.88655 0.91222 0.88066 0.88899 0.86229 0.81953 0.77106 0.91517 0.80299 0.87543 0.85367 0.92818 0.92226 0.93654 0.90925 4 0.85521 0.86158 -0.01352070 13 0.82639 0.85228 -0.025889 0.62321 0.0122087 weaklyHypometh 1 1 insignificant 0.93574 0.01292 weaklyHypometh 1 1 insignificant -0.0171934 0.48512 insignificant 1 insignificant 0.85513 0.79884 0.039249 11 0.82474 0.75370 0.0710378 5.2269e-04 0.95360 weaklyHypermeth 3.0746e-02 1 weaklyHypermeth 0.10889836 0.83063 insignificant 1.000000 1 insignificant 0.053565 0.236519 insignificant 1 insignificant 0.85521 0.88628 -0.032128 13 0.82639 0.87348 -0.0470953 9.9919e-01 2.3726e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9602e-01 0.05124637 insignificant 1.00000000 1.00000 insignificant -0.0582609 0.00751754 weaklyHypometh 0.75175 insignificant 0.86158 0.80070 0.053576 11 0.85228 0.80395 0.048329 4.0760e-04 0.95835 weaklyHypermeth 2.3977e-02 1 weaklyHypermeth 3.0878e-02 0.99157 weaklyHypermeth 1.0000000 1 insignificant 0.070758 0.138630 insignificant 1 insignificant 0.86158 0.88628 -0.013977 13 0.85228 0.87348 -0.021207 8.8289e-01 9.8700e-02 insignificant 1.0000e+00 1.00000000 insignificant 4.7856e-01 4.1885e-01 insignificant 1.00000000 1.000000 insignificant -0.0410675 0.0869635 insignificant 1.00000 insignificant 0.80070 0.88628 -0.065752 11 0.80395 0.87348 -0.069536 0.989630 6.4095e-04 weaklyHypometh 1 5.8269e-02 weaklyHypometh 0.940161 6.8239e-02 insignificant 1 1.000000 insignificant -0.111825 0.0319540 weaklyHypometh 1 insignificant chr13 63123147 63124147 120727 ENSG00000219371 0.78536 199 5 0.77178 74 5 0.73175 67 5 0.81174 131 5 0.74968 62 5 0.64175 213 5 0.74 82 5 0.73058 97 5 0.61251 97 5 0.7187 77 5 0.59616 172 5 0.77574 71 4 0.73375 70 5 0.625 8 0 0.5662 77 5 0.61079 55 4 0.72333 33 2 0.77198 120 5 0.79283 152 5 0.74494 200 5 0.6447 49 4 0.86205 92 5 0.78802 134 5 0.82988 111 5 0.82324 64 4 0.73225 141 5 0.73503 156 5 0.72889 41 5 0.76813 90 4 0.73602 103 5 0.80374 110 5 0.79987 254 5 0.71776 65 4 0.65424 66 5 0.62658 97 5 0.7008 106 4 0.61036 102 5 0.7481 111 5 0.74302 194 5 0.74105 164 5 0.78949 176 5 0.76582 180 5 0.84386 166 5 0.83452 0.78762 0.67406 0.83755 0.77617 0.84568 0.76254 0.78919 0.7889 0.75872 0.78306 0.77848 0.81819 0.8197 0.77558 0.6655 0.85538 0.82717 0.85164 0.81392 0.68476 0.89705 0.8603 0.89408 0.88057 0.81035 0.80504 0.7882 0.80806 0.79155 0.853 0.8689 0.7479 0.68668 0.68991 0.8126 0.69699 0.71371 0.80542 0.8232 0.86054 0.86302 0.8819 3 0.77588 0.83048 -0.049629 5 0.73934 0.78958 -0.050236 0.98783 0.0013104 weaklyHypometh 1 1 insignificant 0.99685 0.0080223 weaklyHypometh 1 1 insignificant -0.059257 0.019239 lowCoverage 1 lowCoverage 0.77491 0.70384 0.066219 5 0.70871 0.73614 -0.027422 0.0008973 0.84981 weaklyHypermeth 0.14955 1 insignificant 0.029369 0.93495 weaklyHypermeth 1 1 insignificant 0.035422 0.22726 lowCoverage 1 lowCoverage 0.77588 0.82841 -0.045063 5 0.73934 0.78111 -0.041765 0.98804 0.025069 weaklyHypometh 1 1 insignificant 0.97066 0.010313 weaklyHypometh 1 1 insignificant -0.064919 0.025696 lowCoverage 1 lowCoverage 0.83048 0.7033 0.11559 5 0.78958 0.68336 0.10622 7.2455e-06 0.99992 weaklyHypermeth 0.0036228 1 weaklyHypermeth 0.00063702 0.99985 weaklyHypermeth 0.31851 1 insignificant 0.094678 0.0061827 lowCoverage 1 lowCoverage 0.83048 0.82841 0.0057153 5 0.78958 0.78111 0.0084706 0.47027 0.53833 insignificant 1 1 insignificant 0.47213 0.49654 insignificant 1 1 insignificant -0.0056622 0.82861 lowCoverage 1 lowCoverage 0.7033 0.82841 -0.11343 5 0.68336 0.78111 -0.097747 0.97669 0.00022884 weaklyHypometh 1 0.22884 insignificant 0.98264 0.0020226 weaklyHypometh 1 1 insignificant -0.10034 0.0074545 lowCoverage 1 lowCoverage chr13 67616697 67617697 121205 ENSG00000218495 0.82709 180 5 0.84515 90 5 0.73740 79 5 0.77500 80 5 0.87619 45 5 0.80081 215 5 0.80469 78 5 0.76264 55 2 0.77205 80 4 0.81377 79 5 0.76103 139 5 0.69478 56 5 0.79391 97 5 NA 0 0 0.76923 71 5 0.81944 51 5 0.74048 39 3 0.80117 108 5 0.76920 96 5 0.85790 209 5 0.62500 34 2 0.78238 62 4 0.79889 127 5 0.64103 37 2 0.88333 43 5 0.88095 100 5 0.91511 55 2 0.89610 21 2 0.62674 61 2 0.78115 97 5 0.67179 73 5 0.85998 208 5 0.70838 86 5 0.60844 54 4 0.75815 101 5 0.69595 50 5 0.90000 40 2 0.77242 125 5 0.82259 162 5 0.91330 189 5 0.76000 100 5 0.83682 176 5 0.79654 177 5 0.80667 0.82211 0.67095 0.75941 0.85370 0.78217 0.85806 0.81709 0.77379 0.80321 0.77163 0.70562 0.80651 NA 0.77646 0.84011 0.73946 0.74967 0.79478 0.80689 0.69356 0.76291 0.72532 0.76691 0.78414 0.90469 0.84397 0.80676 0.73679 0.79876 0.75686 0.79760 0.69205 0.59687 0.69538 0.53374 0.81928 0.77824 0.75795 0.91375 0.74699 0.81605 0.79947 2 0.79534 0.80392 -0.0113008 5 0.79754 0.82387 -0.026325 0.77307 0.205889 insignificant 1 1 insignificant 0.74231 0.2726659 insignificant 1 1.00000 insignificant 0.0104219 0.76327 lowCoverage 1 lowCoverage 0.79534 0.71053 0.075996 5 0.79754 0.74680 0.050742 1.8113e-03 0.86128 weaklyHypermeth 1.2075e-01 1 insignificant 3.9253e-02 0.74565 weaklyHypermeth 1.0000000 1 insignificant 0.050069 2.6996e-01 lowCoverage 1.0000000 lowCoverage 0.79534 0.82960 -0.027375 5 0.79754 0.83031 -0.032770 0.96917 0.1461174 insignificant 1 1 insignificant 0.95278 0.14929262 insignificant 1 1.00000 insignificant -0.035223 0.25197430 lowCoverage 1.00000 lowCoverage 0.80392 0.71053 0.083325 5 0.82387 0.74680 0.077067 4.9618e-03 0.99122 weaklyHypermeth 3.7522e-01 1 insignificant 3.7392e-02 0.94357 weaklyHypermeth 1.00000000 1 insignificant 0.039647 4.5409e-01 lowCoverage 1.00000000 lowCoverage 0.80392 0.82960 -0.0134883 5 0.82387 0.83031 -0.006445 0.84953 4.6138e-01 insignificant 1 1.000000 insignificant 0.72715 0.664678 insignificant 1 1 insignificant -0.045644 0.2859986 lowCoverage 1 lowCoverage 0.71053 0.82960 -0.098419 5 0.74680 0.83031 -0.083513 0.98851 2.9279e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.98221 8.0226e-02 insignificant 1 1.0000000 insignificant -0.085292 1.0703e-01 lowCoverage 1.000000 lowCoverage chr13 69356363 69357363 121281 ENSG00000207495 0.85721 449 16 0.73161 385 16 0.64759 238 15 0.83048 256 15 0.72445 146 14 0.82186 589 16 0.82649 197 13 0.72421 252 13 0.75659 170 14 0.85452 219 13 0.84523 574 16 0.63046 117 10 0.82575 305 16 0.95714 34 4 0.83094 283 15 0.70979 126 8 0.77980 96 7 0.72839 289 14 0.86984 383 16 0.84557 673 16 0.85102 136 11 0.87006 131 11 0.78143 398 16 0.67968 171 13 0.71363 93 10 0.83227 539 16 0.82720 202 14 0.78570 77 6 0.76904 293 13 0.85249 529 16 0.79442 496 16 0.81726 566 16 0.75147 301 13 0.72794 310 16 0.71681 344 16 0.73724 135 8 0.69717 202 11 0.80490 508 16 0.83484 797 16 0.82326 489 16 0.84990 283 11 0.79724 305 13 0.89332 327 13 0.79697 0.72408 0.71889 0.80569 0.76751 0.79504 0.79863 0.72252 0.71287 0.79851 0.80322 0.66663 0.81183 0.8019 0.78415 0.67868 0.77116 0.83787 0.83617 0.78753 0.75926 0.84040 0.76575 0.64921 0.72337 0.82241 0.75932 0.72750 0.78429 0.84301 0.79553 0.78370 0.73277 0.74199 0.77459 0.80036 0.73785 0.76139 0.80008 0.84942 0.84373 0.77775 0.88170 5 0.80683 0.82897 0.0063731 16 0.80599 0.74744 0.058555 0.29192 0.898244 insignificant 1 1 insignificant 0.83694 0.5628659 insignificant 1 1.00000 insignificant -0.0079523 0.74790 insignificant 1 insignificant 0.80626 0.78222 0.034145 16 0.77209 0.73094 0.041154 2.0786e-04 0.98849 weaklyHypermeth 1.7322e-02 1 weaklyHypermeth 2.5670e-03 0.99681 weaklyHypermeth 0.2333635 1 insignificant 0.050642 4.5103e-02 weaklyHypermeth 1.0000000 insignificant 0.80655 0.82826 -0.035947 16 0.78720 0.81551 -0.028317 0.87344 0.0088094 weaklyHypometh 1 1 insignificant 0.99576 0.00146720 weaklyHypometh 1 0.73360 insignificant -0.049816 0.05623333 insignificant 1.00000 insignificant 0.82897 0.78198 0.041019 16 0.74744 0.70261 0.044826 1.9567e-04 0.99784 weaklyHypermeth 1.7788e-02 1 weaklyHypermeth 2.9631e-04 0.99989 weaklyHypermeth 0.04938559 1 weaklyHypermeth 0.058595 1.9634e-02 weaklyHypermeth 1.00000000 insignificant 0.82893 0.82818 -0.0412735 16 0.73341 0.80526 -0.071856 0.88119 1.7389e-03 weaklyHypometh 1 0.869458 insignificant 0.97956 0.013585 weaklyHypometh 1 1 insignificant -0.041863 0.0923841 insignificant 1 insignificant 0.78254 0.82826 -0.065283 16 0.75524 0.81551 -0.060268 0.99999 1.7178e-04 weaklyHypometh 1 2.8630e-02 weaklyHypometh 1.00000 1.9765e-04 weaklyHypometh 1 0.0658833 weaklyHypometh -0.100458 1.4362e-03 weaklyHypometh 0.478738 insignificant chr13 69787526 69788526 121289 KLHL1 ENSG00000150361 0.79333 61 4 0.73636 157 7 0.74598 129 7 0.74405 75 4 0.87284 55 5 0.79297 315 7 0.87577 133 7 0.75267 84 7 0.73933 97 7 0.82763 81 7 0.77246 202 7 0.87088 74 7 0.75218 85 7 NA 0 0 0.88259 97 7 0.74621 97 7 0.76809 78 7 0.72500 66 4 0.84365 94 7 0.73081 234 7 0.83506 42 4 0.80810 65 7 0.76306 72 4 0.85556 38 4 0.81451 53 7 0.76316 152 7 0.80440 58 5 0.86374 55 4 0.76129 77 7 0.80520 130 7 0.78778 120 7 0.79257 293 7 0.67524 161 6 0.70025 137 7 0.66918 152 7 0.68964 65 6 0.73060 52 4 0.67362 180 7 0.71243 93 4 0.86494 99 4 0.63237 51 4 0.77241 63 4 0.79744 63 4 0.77133 0.67822 0.69282 0.73016 0.75842 0.71263 0.84259 0.70577 0.69472 0.80938 0.70326 0.86181 0.71420 NA 0.87289 0.72885 0.70594 0.72339 0.85818 0.64393 0.68182 0.68771 0.74820 0.72306 0.65880 0.72898 0.73779 0.87639 0.73918 0.82894 0.72400 0.73542 0.62948 0.64364 0.60631 0.60611 0.74442 0.70132 0.70933 0.81450 0.62530 0.75221 0.77797 4 0.75881 0.78009 -0.0169763 7 0.78378 0.80032 -0.016539 0.70363 0.104848 insignificant 1 1 insignificant 0.67753 0.0990122 insignificant 1 1.00000 insignificant -0.0164939 0.31687 insignificant 1 insignificant 0.75881 0.67738 0.077564 7 0.78378 0.69708 0.086698 1.9405e-06 1.00000 weaklyHypermeth 2.7721e-04 1 weaklyHypermeth 2.0985e-06 0.99999 weaklyHypermeth 0.0020985 1 weaklyHypermeth 0.098287 4.1953e-06 weaklyHypermeth 0.0041953 weaklyHypermeth 0.73623 0.74797 -0.014980 4 0.75367 0.80412 -0.050447 0.76335 0.1014564 lowCoverage 1 1 lowCoverage 0.58380 0.16556627 lowCoverage 1 1.00000 lowCoverage 0.032124 0.47398787 lowCoverage 1.00000 lowCoverage 0.78009 0.67738 0.094815 7 0.80032 0.69708 0.103237 5.7963e-09 0.99969 weaklyHypermeth 1.9321e-06 1 weaklyHypermeth 7.6335e-07 0.99834 weaklyHypermeth 0.00076335 1 weaklyHypermeth 0.114781 6.9564e-07 weaklyHypermeth 0.00069564 weaklyHypermeth 0.76176 0.74797 0.0045973 4 0.77366 0.80412 -0.030459 0.78223 4.4348e-01 lowCoverage 1 1.000000 lowCoverage 0.89018 0.444549 lowCoverage 1 1 lowCoverage 0.048618 0.2903448 lowCoverage 1 lowCoverage 0.65815 0.74797 -0.086825 4 0.66683 0.80412 -0.137287 0.98893 2.3035e-05 lowCoverage 1 5.7588e-03 lowCoverage 0.99305 2.7187e-04 lowCoverage 1 0.0679681 lowCoverage -0.066163 1.7035e-01 lowCoverage 1.000000 lowCoverage chr13 70380679 70381679 121354 ENSG00000202433 0.83671 356 9 0.72596 129 9 0.76987 123 9 0.79745 196 9 0.74101 97 9 0.72491 247 9 0.74949 111 8 0.65745 117 8 0.74866 112 8 0.79053 131 9 0.77894 204 9 0.74525 72 9 0.83062 114 8 0.88889 18 2 0.72855 147 8 0.80802 57 5 0.84332 138 9 0.85091 243 9 0.84163 196 9 0.81152 311 9 0.87654 44 6 0.85926 68 8 0.79545 204 9 0.88268 73 6 0.90804 68 6 0.75111 198 9 0.78144 102 6 0.90247 59 6 0.67651 138 7 0.80695 138 8 0.80461 189 9 0.83303 399 9 0.69030 104 8 0.72485 126 9 0.79035 141 7 0.81930 67 8 0.67617 92 6 0.71628 137 9 0.82197 379 9 0.85132 376 9 0.85456 295 9 0.85928 386 9 0.82232 331 9 0.84096 0.70514 0.76484 0.78726 0.77713 0.74620 0.75691 0.68325 0.73031 0.77356 0.79577 0.74114 0.78427 NA 0.78355 0.81414 0.84485 0.85455 0.81884 0.78692 0.88497 0.85046 0.78599 0.85149 0.88489 0.77452 0.73314 0.85298 0.73179 0.79192 0.78477 0.81676 0.68517 0.70854 0.77143 0.77358 0.63533 0.70784 0.82603 0.85659 0.84980 0.85860 0.81170 6 0.78166 0.81250 -0.0196203 9 0.78920 0.81713 -0.027924 0.99074 0.018210 weaklyHypometh 1 1 insignificant 0.99975 0.0010755 weaklyHypometh 1 0.53775 insignificant -0.0396886 0.10525 insignificant 1 insignificant 0.78166 0.72564 0.068828 8 0.78920 0.73871 0.050490 8.9218e-06 0.91803 weaklyHypermeth 9.9131e-04 1 weaklyHypermeth 9.7798e-04 0.91091 weaklyHypermeth 0.0977984 1 weaklyHypermeth 0.047276 1.0978e-01 insignificant 1.0000000 insignificant 0.78166 0.81890 -0.053575 9 0.78920 0.84138 -0.052176 0.99987 0.0027667 weaklyHypometh 1 1 insignificant 0.99982 0.00063958 weaklyHypometh 1 0.63958 insignificant -0.058405 0.00087040 weaklyHypometh 0.29013 insignificant 0.81250 0.72564 0.087815 8 0.81713 0.73871 0.078415 2.5513e-06 0.99969 weaklyHypermeth 3.6446e-04 1 weaklyHypermeth 3.2738e-05 0.99998 weaklyHypermeth 0.01636884 1 weaklyHypermeth 0.086965 1.4297e-02 weaklyHypermeth 1.00000000 insignificant 0.81250 0.81890 -0.0323416 9 0.81713 0.84138 -0.024251 0.67806 1.0812e-01 insignificant 1 1.000000 insignificant 0.37712 0.266636 insignificant 1 1 insignificant -0.018716 0.3944319 insignificant 1 insignificant 0.72564 0.81890 -0.120492 8 0.73871 0.84138 -0.102666 0.99605 4.6818e-07 weaklyHypometh 1 2.3409e-04 weaklyHypometh 0.99603 5.9280e-06 weaklyHypometh 1 0.0059280 weaklyHypometh -0.105681 4.6920e-03 weaklyHypometh 0.586502 insignificant chr13 71853949 71854949 121705 ENSG00000200037 0.90180 444 16 0.72035 202 12 0.87185 133 12 0.92844 332 16 0.80231 55 4 0.83746 452 16 0.79253 94 6 0.76354 133 10 0.80080 91 7 0.90673 80 6 0.91212 316 16 0.84921 73 6 0.94789 183 10 NA 0 0 0.82937 113 12 0.79815 65 7 0.78041 72 5 0.85151 451 16 0.89484 154 15 0.81845 370 15 0.77941 55 5 0.76067 159 13 0.88190 160 12 0.91250 60 8 0.92313 101 11 0.84984 289 15 0.80863 138 9 0.89537 50 7 0.80821 129 9 0.83331 275 16 0.81549 248 15 0.82305 512 16 0.80236 116 10 0.73293 119 10 0.79153 289 16 0.80685 91 9 0.74429 76 8 0.81104 257 16 0.87950 396 13 0.91984 475 16 0.92539 406 16 0.90172 301 16 0.92479 450 16 0.90026 0.79006 0.84655 0.89903 0.75932 0.83207 0.84462 0.81437 0.79989 0.91552 0.88150 0.77717 0.88460 NA 0.89499 0.74454 0.78521 0.89362 0.89819 0.85272 0.86859 0.83987 0.82144 0.78846 0.88614 0.80429 0.85613 0.83974 0.81732 0.88649 0.84129 0.86111 0.75081 0.74753 0.72787 0.75119 0.70772 0.83514 0.87046 0.87047 0.92127 0.87086 0.89649 4 0.86835 0.85044 0.0137990 14 0.87013 0.85081 0.019317 0.12045 0.998658 insignificant 1 1 insignificant 0.63162 0.9574219 insignificant 1 1.00000 insignificant 0.0015532 0.94063 insignificant 1 insignificant 0.86831 0.77110 0.085299 13 0.86249 0.79170 0.070790 1.4411e-09 0.99968 weaklyHypermeth 4.8038e-07 1 weaklyHypermeth 3.0467e-05 0.99737 weaklyHypermeth 0.0050779 1 weaklyHypermeth 0.061013 7.2250e-03 weaklyHypermeth 0.8027802 insignificant 0.86835 0.91617 -0.035158 14 0.87013 0.91445 -0.044327 0.98496 0.0060670 weaklyHypometh 1 1 insignificant 0.81914 0.22751742 insignificant 1 1.00000 insignificant -0.067736 0.00056751 weaklyHypometh 0.28376 insignificant 0.85023 0.77110 0.072520 13 0.84203 0.79170 0.050336 1.6256e-05 0.99801 weaklyHypermeth 1.8062e-03 1 weaklyHypermeth 1.1364e-03 0.99931 weaklyHypermeth 0.15258511 1 insignificant 0.059460 1.1267e-02 weaklyHypermeth 1.00000000 insignificant 0.85044 0.91617 -0.0522878 15 0.85081 0.91445 -0.063644 0.99999 3.0533e-05 weaklyHypometh 1 0.030533 weaklyHypometh 0.99672 0.107948 insignificant 1 1 insignificant -0.069290 0.0012328 weaklyHypometh 1 insignificant 0.77110 0.91613 -0.124466 13 0.79170 0.90942 -0.117724 0.99987 7.2299e-10 weaklyHypometh 1 7.2299e-07 weaklyHypometh 0.99945 1.3223e-05 weaklyHypometh 1 0.0066113 weaklyHypometh -0.128749 4.5457e-05 weaklyHypometh 0.045457 weaklyHypometh chr13 88050728 88051728 122835 ENSG00000218326 0.84807 313 8 0.67999 129 7 0.53649 144 8 0.89792 136 7 0.97154 92 4 0.86198 195 7 0.65474 80 5 0.7343 61 4 0.89028 77 4 0.95573 51 3 0.8337 147 5 0.95238 69 5 0.95297 81 3 0.85185 36 3 0.84233 81 5 0.91023 69 5 0.61855 95 4 0.8284 132 7 0.92935 89 4 0.86438 134 7 1 14 1 0.94444 26 2 0.8973 172 8 0.72109 41 3 0.75 8 0 0.93661 155 7 0.94844 87 5 0.93333 35 3 0.86806 59 2 0.83772 160 6 0.74512 128 6 0.85054 211 7 0.83725 68 5 0.8248 54 4 0.75108 211 7 0.85417 21 2 0.62134 68 3 0.81033 138 7 0.90903 204 7 0.9396 204 7 0.93132 206 8 0.87319 222 7 0.88548 162 7 0.80968 0.73056 0.77666 0.74653 0.94102 0.813 0.8061 0.8195 0.87713 0.8965 0.90865 0.95366 0.91732 0.8244 0.8192 0.86433 0.76425 0.79001 0.87095 0.86163 1 0.87897 0.86248 0.81165 0.7673 0.86099 0.8454 0.91845 0.96391 0.8965 0.74497 0.81337 0.82583 0.82919 0.78801 0.8192 0.79226 0.8594 0.85587 0.80063 0.90785 0.84362 0.87033 2 0.84984 0.86588 -0.013853 7 0.8 0.7297 0.0703 0.76102 0.13383 insignificant 1 1 insignificant 0.95693 0.056471 insignificant 1 1 insignificant -0.038629 0.31846 lowCoverage 1 lowCoverage 0.84984 0.80536 0.048991 6 0.8 0.66234 0.13765 0.0044519 0.9619 weaklyHypermeth 0.74199 1 insignificant 0.08708 0.91787 insignificant 1 1 insignificant 0.047596 0.30983 lowCoverage 1 lowCoverage 0.84984 0.90782 -0.048267 6 0.8 0.9281 -0.1281 0.99818 0.016019 weaklyHypometh 1 1 insignificant 0.99696 0.07545 insignificant 1 1 insignificant -0.076963 0.018298 weaklyHypometh 1 insignificant 0.86588 0.80536 0.055583 6 0.7297 0.66234 0.067351 0.013699 1 weaklyHypermeth 1 1 insignificant 0.02455 0.99985 weaklyHypermeth 1 1 insignificant 0.086225 0.077666 lowCoverage 1 lowCoverage 0.86588 0.90782 -0.021532 6 0.7297 0.9281 -0.1984 0.99821 0.67613 insignificant 1 1 insignificant 0.81002 0.97476 insignificant 1 1 insignificant -0.038334 0.21023 lowCoverage 1 lowCoverage 0.80536 0.90782 -0.077214 5 0.66234 0.9281 -0.26575 1 0.00017323 weaklyHypometh 1 0.057744 weaklyHypometh 0.99961 0.010586 weaklyHypometh 1 1 insignificant -0.12456 0.015304 lowCoverage 1 lowCoverage chr13 92533609 92534609 123054 ENSG00000221473 0.78760 62 2 0.76269 36 5 0.80635 47 5 0.62500 33 2 0.88000 25 3 0.81944 105 5 0.92527 40 5 0.84643 35 3 0.93333 26 4 0.84762 23 2 0.92876 93 5 0.61429 22 1 0.89333 17 1 NA 0 0 0.93778 28 4 0.25000 16 0 0.92000 22 4 0.79048 48 2 0.40000 10 2 0.89200 98 5 0.56667 12 0 0.56250 32 2 0.87250 40 3 0.89643 29 4 0.90000 6 0 0.85682 46 5 0.75141 44 5 0.50000 8 0 0.25000 6 0 0.86154 39 5 0.82222 25 2 0.87546 121 5 0.68960 55 5 0.42500 11 1 0.37511 170 5 1.00000 4 0 0.28333 13 0 0.82727 44 5 0.93333 23 2 0.89762 38 2 0.77778 18 2 0.88889 20 2 0.87500 16 2 0.62120 0.63744 0.69888 0.47059 1.00000 0.51536 0.83710 0.71324 1.00000 0.59944 0.87395 0.69748 0.85882 NA 0.92157 0.44916 1.00000 0.49580 0.23529 0.63529 0.64706 0.45956 0.69118 0.73529 0.64706 0.62032 0.72460 0.35294 0.14706 0.51131 0.60784 0.64442 0.55294 0.28824 0.52000 0.86684 0.17647 0.64095 0.76471 0.67297 0.68627 0.60784 0.82353 0 0.77863 0.75980 0.0244814 3 0.82440 0.81744 0.0069623 0.39913 0.67251 lowCoverage 1 1 lowCoverage 0.38408 0.738526 lowCoverage 1 1 lowCoverage 0.055829 0.458865 lowCoverage 1 lowCoverage 0.77863 0.44108 0.306037 5 0.82440 0.47029 0.3541087 1.2915e-10 1.00000 hypermethylated 4.3050e-08 1 hypermethylated 0.00643606 0.99844 weaklyHypermeth 0.45972 1 insignificant 0.182072 0.187173 lowCoverage 1 lowCoverage 0.77863 0.81739 -0.051163 2 0.82440 0.91402 -0.089621 0.99352 0.05978556 lowCoverage 1 1.00000 lowCoverage 0.99336 0.0173670 lowCoverage 1 1 lowCoverage -0.0923988 0.08069246 lowCoverage 1.00000 lowCoverage 0.75980 0.44108 0.285320 3 0.81744 0.47029 0.347146 1.1182e-07 1.00000 lowCoverage 2.2364e-05 1 lowCoverage 0.04356624 0.99399 lowCoverage 1.000000 1 lowCoverage 0.126242 0.361867 lowCoverage 1 lowCoverage 0.75980 0.81739 -0.097878 2 0.81744 0.91402 -0.0965835 0.99874 0.03237416 lowCoverage 1 1.00000 lowCoverage 0.999951 0.0096296 lowCoverage 1 1 lowCoverage -0.1482279 0.0401049 lowCoverage 1 lowCoverage 0.44108 0.81739 -0.292435 2 0.47029 0.91402 -0.443730 1.00000 1.6007e-05 lowCoverage 1 2.2867e-03 lowCoverage 0.99999 2.0826e-03 lowCoverage 1 0.2975121 lowCoverage -0.274470 0.0636946 lowCoverage 1.00000 lowCoverage chr13 93105119 93106119 123118 ENSG00000218393 0.76875 252 8 0.75454 90 8 0.69205 127 8 0.82536 198 8 0.66748 58 5 0.74955 318 8 0.85699 90 8 0.81011 96 8 0.64742 87 6 0.81931 103 8 0.77461 187 8 0.89544 56 4 0.74583 115 8 0.75000 40 5 0.79629 93 8 0.61149 72 4 0.73958 69 4 0.76605 142 8 0.80069 154 8 0.81783 282 8 0.75577 76 7 0.76518 88 4 0.81921 129 8 0.75179 48 4 0.81870 55 6 0.76963 237 8 0.79943 68 5 0.82099 42 3 0.75328 93 4 0.73335 172 8 0.72085 189 8 0.83474 326 8 0.63735 112 8 0.63788 118 8 0.63782 135 8 0.60227 59 4 0.83472 62 4 0.75470 199 8 0.86763 192 8 0.85292 256 8 0.80639 160 8 0.90113 171 8 0.82720 199 8 0.79652 0.75505 0.68299 0.84146 0.80102 0.81002 0.87675 0.79207 0.70278 0.81644 0.79989 0.82194 0.81182 0.84298 0.83427 0.72992 0.77625 0.90610 0.82285 0.84460 0.78298 0.80485 0.82324 0.77066 0.79473 0.88407 0.80371 0.88699 0.84302 0.78026 0.80786 0.83430 0.67486 0.63428 0.72031 0.65532 0.84193 0.78760 0.87398 0.89748 0.84827 0.89437 0.84798 3 0.78889 0.80408 -0.0140228 8 0.66525 0.82359 -0.1583390 0.98821 0.82890 insignificant 1 1 insignificant 0.90962 0.518983 insignificant 1 1 insignificant -0.014108 0.467422 insignificant 1 insignificant 0.78947 0.71387 0.075870 8 0.77913 0.69260 0.0865344 3.8601e-05 0.99980 weaklyHypermeth 2.9693e-03 1 weaklyHypermeth 0.00060782 0.99904 weaklyHypermeth 0.10130 1 insignificant 0.080345 0.085576 insignificant 1 insignificant 0.78947 0.85072 -0.066371 8 0.77913 0.84495 -0.065821 0.99965 0.00122099 weaklyHypometh 1 0.61050 insignificant 0.99930 0.0023118 weaklyHypometh 1 1 insignificant -0.0865838 0.00226012 weaklyHypometh 0.70514 insignificant 0.80451 0.71387 0.090188 8 0.78896 0.69260 0.096364 1.0384e-04 0.99989 weaklyHypermeth 8.6535e-03 1 weaklyHypermeth 0.00135240 0.99996 weaklyHypermeth 0.169050 1 insignificant 0.094453 0.050189 insignificant 1 insignificant 0.80451 0.85072 -0.052609 8 0.78896 0.84495 -0.0559909 0.99641 0.01155906 weaklyHypometh 1 1.00000 insignificant 0.998684 0.0287759 weaklyHypometh 1 1 insignificant -0.0724758 0.0064507 weaklyHypometh 1 insignificant 0.71387 0.85072 -0.143388 8 0.69260 0.84495 -0.152355 1.00000 1.7944e-07 weaklyHypometh 1 8.9718e-05 weaklyHypometh 1.00000 9.2617e-06 weaklyHypometh 1 0.0058684 weaklyHypometh -0.166929 0.0046094 weaklyHypometh 0.65849 insignificant chr13 96063501 96064501 123446 ENSG00000216577 0.80364 280 9 0.68562 179 9 0.65561 158 9 0.76527 181 9 0.79339 84 9 0.68916 422 9 0.58886 124 9 0.67878 213 9 0.65448 157 9 0.73688 113 9 0.71593 281 9 0.50399 74 6 0.75919 145 9 0.53125 48 2 0.74602 150 9 0.58704 60 5 0.76348 54 5 0.78232 197 9 0.68429 221 9 0.77868 424 9 0.84649 79 6 0.80360 125 9 0.72609 210 9 0.53272 120 9 0.85616 83 9 0.81012 231 9 0.78141 119 8 0.66693 67 6 0.76018 155 9 0.72401 220 9 0.77560 185 9 0.73635 401 9 0.57122 160 9 0.65150 161 9 0.71534 303 9 0.69045 102 5 0.72813 116 9 0.67137 227 9 0.81067 276 9 0.80356 228 9 0.78196 220 9 0.77922 225 9 0.81138 281 9 0.83100 0.74825 0.71670 0.82131 0.78939 0.76460 0.71783 0.76487 0.73093 0.82533 0.83423 0.67234 0.81176 0.81233 0.78651 0.72302 0.80599 0.83473 0.79018 0.80158 0.83477 0.81535 0.75656 0.67967 0.91048 0.82236 0.78581 0.74539 0.80739 0.78179 0.79829 0.77762 0.56879 0.67029 0.74376 0.68961 0.78469 0.73141 0.85307 0.83322 0.81434 0.84212 0.87055 6 0.77139 0.78346 -0.0072046 9 0.62670 0.66849 -0.0417823 0.82365 0.38299 insignificant 1 1 insignificant 0.93970 0.271349 insignificant 1 1 insignificant -0.056443 0.090204 insignificant 1 insignificant 0.77271 0.69972 0.071766 9 0.74301 0.67623 0.0667772 9.7134e-06 0.99445 weaklyHypermeth 8.8303e-04 1 weaklyHypermeth 0.00023640 0.96707 weaklyHypermeth 0.05910 1 weaklyHypermeth 0.023859 0.443674 insignificant 1 insignificant 0.77271 0.85122 -0.065299 9 0.74301 0.80852 -0.065504 0.99433 0.00018128 weaklyHypometh 1 0.18128 insignificant 0.99271 0.0017474 weaklyHypometh 1 1 insignificant -0.1021632 0.00005917 weaklyHypometh 0.05917 weaklyHypometh 0.78421 0.69972 0.078153 9 0.75243 0.67623 0.076191 6.2879e-05 0.99986 weaklyHypermeth 5.7162e-03 1 weaklyHypermeth 0.00024508 0.99993 weaklyHypermeth 0.064447 1 weaklyHypermeth 0.080302 0.033426 weaklyHypermeth 1 insignificant 0.78421 0.85122 -0.057402 9 0.75243 0.80852 -0.0560908 0.95534 0.00026334 weaklyHypometh 1 0.26334 insignificant 0.832764 0.0058270 weaklyHypometh 1 1 insignificant -0.0457199 0.1057048 insignificant 1 insignificant 0.69972 0.85122 -0.136573 9 0.67623 0.80852 -0.132281 0.99996 7.7513e-07 weaklyHypometh 1 2.5838e-04 weaklyHypometh 0.99995 1.7605e-05 weaklyHypometh 1 0.0058684 weaklyHypometh -0.126022 0.0020575 weaklyHypometh 0.51283 insignificant chr13 96823606 96824606 123535 ENSG00000202290 0.79764 137 5 0.85938 49 3 0.92000 21 3 0.82389 106 5 0.78656 100 5 0.55128 42 3 0.74158 74 5 0.74664 69 5 0.42857 46 3 0.71429 54 5 0.72645 93 3 0.77407 87 6 0.69373 103 5 0.82437 74 6 0.77111 82 5 0.62945 53 2 0.75335 42 3 0.80966 206 6 0.58333 14 0 0.74747 29 3 0.70000 18 3 1.00000 8 0 0.82227 194 6 0.75000 18 0 0.63847 82 3 0.86472 39 3 0.91905 24 3 0.77778 9 0 0.79779 88 5 0.92593 31 3 0.48095 21 3 0.76667 35 3 0.76319 99 6 0.72630 43 3 0.55833 35 5 NA 0 0 0.52124 70 5 0.89091 35 3 0.66602 88 5 0.76300 117 6 0.87720 100 5 0.81328 148 6 0.80185 103 6 0.78554 0.80207 0.89091 0.75728 0.82498 0.72028 0.68621 0.82903 0.68182 0.78788 0.73419 0.82727 0.84450 0.83148 0.80933 0.70697 0.78543 0.77197 0.81818 0.74887 0.69091 1.00000 0.81329 0.54545 0.68114 0.74174 0.86753 0.77963 0.80147 0.87879 0.64545 0.70909 0.73750 0.67334 0.62273 NA 0.67084 0.85124 0.74569 0.81608 0.83542 0.78600 0.82120 0 0.77718 0.78483 -0.0088880 5 0.69454 0.76001 -0.0654713 0.88128 0.28732 insignificant 1 1 insignificant 0.91211 0.033265 weaklyHypometh 1 1 insignificant -0.052828 0.281061 lowCoverage 1 lowCoverage 0.77861 0.70922 0.070463 5 0.75805 0.61026 0.1477895 1.3978e-03 0.94353 weaklyHypermeth 9.3189e-02 1 weaklyHypermeth 0.03165984 0.94568 weaklyHypermeth 1.00000 1 insignificant 0.042146 0.586518 lowCoverage 1 lowCoverage 0.77891 0.81295 -0.032476 5 0.76534 0.80348 -0.038145 0.97639 0.12570941 insignificant 1 1.00000 insignificant 0.91317 0.1897984 insignificant 1 1 insignificant -0.0501288 0.27499715 lowCoverage 1.00000 lowCoverage 0.78584 0.70922 0.073365 5 0.79716 0.61026 0.186900 1.1826e-02 0.99542 weaklyHypermeth 6.5700e-01 1 insignificant 0.07645470 0.99802 insignificant 1.000000 1 insignificant 0.094974 0.269415 lowCoverage 1 lowCoverage 0.78571 0.81295 -0.027550 5 0.79668 0.80348 -0.0068028 0.59150 0.42743292 insignificant 1 1.00000 insignificant 0.169329 0.8638171 insignificant 1 1 insignificant 0.0026989 0.9603465 lowCoverage 1 lowCoverage 0.71174 0.81295 -0.102908 5 0.71197 0.80348 -0.091519 0.99369 7.0098e-03 weaklyHypometh 1 4.1234e-01 insignificant 0.98774 3.0340e-02 weaklyHypometh 1 1.0000000 insignificant -0.092275 0.2734957 lowCoverage 1.00000 lowCoverage chr13 99628217 99629217 123641 ENSG00000220878 0.67299 42 5 0.53333 35 5 0.20000 15 0 0.77778 27 2 0.54949 31 2 0.58159 40 5 0.49333 28 5 0.65714 67 3 0.63333 39 5 0.53810 29 5 0.61582 88 5 0.33929 15 2 0.66000 38 5 0.72143 41 5 0.66616 32 2 0.60000 7 0 0.55844 43 2 0.75918 32 4 0.63333 13 0 0.65905 32 5 0.50000 6 0 0.53333 10 0 0.64545 28 2 0.73333 23 4 0.90000 21 3 0.52167 38 5 0.88000 18 3 0.75000 13 0 0.86000 20 2 0.68366 60 3 0.67077 49 5 0.73333 48 5 0.66603 49 5 0.80000 39 5 0.60325 49 5 0.50000 13 0 0.48333 18 0 0.59286 30 3 0.67143 25 2 0.66667 41 5 0.69939 50 5 0.36667 21 2 0.55238 47 5 0.71443 0.59259 0.22222 0.80247 0.44377 0.62152 0.52963 0.73016 0.62963 0.76296 0.60091 0.59009 0.68889 0.65000 0.69080 0.66667 0.65178 0.68095 0.64815 0.71005 0.54795 0.59259 0.67677 0.74074 0.88889 0.54259 0.86667 0.72848 0.86667 0.68555 0.70085 0.77778 0.72151 0.81481 0.62266 0.55556 0.50000 0.62169 0.69841 0.67130 0.72660 0.37037 0.56746 0 0.61572 0.69760 -0.0410018 3 0.62270 0.66577 -0.0430767 0.95883 0.23174 lowCoverage 1 1 lowCoverage 0.94355 0.062629 lowCoverage 1 1 lowCoverage -0.108473 0.039615 lowCoverage 1 lowCoverage 0.61572 0.65152 -0.012627 5 0.62270 0.63128 -0.0085855 6.4159e-01 0.49558 insignificant 1.0000e+00 1 insignificant 0.52226679 0.69777 insignificant 1.00000 1 insignificant -0.015088 0.794328 lowCoverage 1 lowCoverage 0.61572 0.59239 0.011201 5 0.62270 0.61187 0.010823 0.60758 0.73256826 insignificant 1 1.00000 insignificant 0.42231 0.8117317 insignificant 1 1 insignificant 0.0011821 0.98679114 lowCoverage 1.00000 lowCoverage 0.69760 0.65152 0.016879 3 0.66577 0.63128 0.034491 3.4880e-01 0.77781 lowCoverage 1.0000e+00 1 lowCoverage 0.07843720 0.95504 lowCoverage 1.000000 1 lowCoverage 0.093385 0.157182 lowCoverage 1 lowCoverage 0.69760 0.59239 0.054768 3 0.66577 0.61187 0.0538998 0.24109 0.93696881 lowCoverage 1 1.00000 lowCoverage 0.040214 0.9948137 lowCoverage 1 1 lowCoverage 0.1096552 0.1746503 lowCoverage 1 lowCoverage 0.65152 0.59239 0.024121 5 0.63128 0.61187 0.019409 0.20110 6.6040e-01 insignificant 1 1.0000e+00 insignificant 0.26754 7.7508e-01 insignificant 1 1.0000000 insignificant 0.016270 0.8395101 lowCoverage 1.00000 lowCoverage chr13 110387223 110388223 124124 ENSG00000220095 0.8609141 321 7 0.8655230 164 6 0.889377 152 6 0.9691582 412 6 1.000000 143 6 0.898566 327 7 0.8594178 131 6 0.8339388 194 6 0.9409299 210 6 0.831088 226 6 0.8773569 236 6 0.809091 132 6 0.830882 253 6 0.810234 221 6 0.8237679 323 6 0.814286 53 6 0.8333333 28 4 0.797771 495 6 0.861276 169 6 0.754051 200 6 0.934524 51 6 0.81046673 121 7 0.810992 169 6 0.7125947 120 6 0.9416667 110 6 0.8952930 213 8 0.804833 136 6 0.919490 167 7 0.817687 97 6 0.901184 234 7 0.907846 162 6 0.984683 285 6 0.897654 228 6 0.7855478 83 6 0.87277 441 7 0.9791667 48 6 0.974505 140 6 0.865731 210 8 0.9544366 453 6 0.9774661 319 6 0.792809 380 6 0.8119508 359 6 0.97519 338 6 0.981027 0.9338369 0.946955 0.959838 1.0000000 0.964173 0.8670619 0.969786 0.947314 0.9712508 0.944380 0.9500722 0.9681503 0.9456266 0.9580078 0.9357143 0.9642857 0.93157 0.983686 0.954243 0.9077381 0.9422396 0.882156 0.950206 0.9484568 0.9752780 0.949482 0.960624 0.968934 0.967623 0.9728000 0.982448 0.9655155 0.9136512 0.993309 0.9861111 0.973950 0.964146 0.9556717 0.9701039 0.9730108 0.9564681 0.9745510 6 0.948052 0.944713 -0.0018485 6 0.813575 0.890460 -0.0768849 0.973481 8.6815e-01 insignificant 1 1.0000000 insignificant 0.96291 9.1321e-01 insignificant 1 1.000000 insignificant -0.0120569 0.649791 insignificant 1 insignificant 0.948040 0.971304 -0.01822578 6 0.794933 0.816119 -0.021186 9.9999e-01 0.26082 insignificant 1.0000e+00 1 insignificant 9.9854e-01 0.68027 insignificant 1.0000e+00 1 insignificant -0.037847 2.8432e-01 insignificant 1.0000000 insignificant 0.948256 0.9632234 -0.0094664 6 0.883258 0.771940 0.111319 0.7515635 4.7863e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8891482 6.8569e-01 insignificant 1.00000 1.00000000 insignificant -0.0443232 3.5342e-01 insignificant 1.000000 insignificant 0.944683 0.971304 -0.0151552 6 0.879506 0.816119 0.063387 9.9322e-01 0.42368 insignificant 1.0000e+00 1 insignificant 9.8929e-01 0.74121 insignificant 1.0000e+00 1 insignificant -0.025790 5.0483e-01 insignificant 1.0000000 insignificant 0.945073 0.9632234 -0.0058643 6 0.888340 0.771940 0.1164000 0.27621799 0.63079152 insignificant 1.000000 1.00000 insignificant 0.4874820 0.643318 insignificant 1.00000 1 insignificant -0.03226627 0.5149060 insignificant 1.00000 insignificant 0.972150 0.9632234 0.0110355 6 0.906798 0.771940 0.134858 0.23098 9.7335e-01 insignificant 1 1.0000e+00 insignificant 0.44220 9.9407e-01 insignificant 1 1.0000e+00 insignificant -0.0064758 9.0190e-01 insignificant 1.0000000 insignificant chr13 111143289 111144289 124141 ENSG00000204398 0.8603249 173 4 0.6224660 121 5 0.804286 78 5 0.6826422 174 4 0.844615 62 5 0.703759 155 4 0.7291069 84 5 0.8614402 87 5 0.7270045 117 5 0.817148 125 5 0.8484900 140 5 0.892857 114 4 0.497557 182 5 0.808712 47 4 0.7862788 141 5 0.937619 80 4 0.7154545 52 5 0.770103 265 4 0.648918 70 5 0.579858 150 4 0.929206 52 5 0.64766484 102 4 0.801170 97 4 0.8040404 62 5 0.7879552 68 4 0.8667992 115 5 0.700962 39 2 0.682540 39 4 0.736250 69 5 0.816288 130 5 0.712958 110 5 0.904897 132 5 0.381317 154 5 0.2907651 99 5 0.66201 153 4 0.5305556 50 3 0.476844 105 5 0.520317 98 5 0.6700904 215 4 0.6923385 124 4 0.672054 207 4 0.6677369 190 4 0.64302 167 4 0.860702 0.6025220 0.846881 0.854900 0.8705296 0.792271 0.8367617 0.889769 0.820776 0.8559986 0.874975 0.9926700 0.5004201 0.8135173 0.8183179 0.9200007 0.7671695 0.76300 0.690523 0.716018 0.9313787 0.6366048 0.930648 0.930572 0.7646594 0.8542073 0.712231 0.856068 0.697977 0.852273 0.7285870 0.920863 0.3988222 0.2760759 0.733491 0.5509461 0.551919 0.566242 0.7614888 0.7385442 0.6457916 0.6561455 0.7880786 4 0.779479 0.807882 -0.0348052 5 0.756063 0.799695 -0.0436327 0.986115 1.1711e-01 insignificant 1 1.0000000 insignificant 0.94852 2.4892e-01 insignificant 1 1.000000 insignificant -0.0256288 0.481467 lowCoverage 1 lowCoverage 0.779479 0.515933 0.24446527 5 0.756063 0.485004 0.271058 6.9804e-15 1.00000 hypermethylated 6.9804e-13 1 hypermethylated 3.6553e-07 1.00000 hypermethylated 9.8545e-05 1 hypermethylated 0.279965 1.6459e-03 lowCoverage 0.1496243 lowCoverage 0.779479 0.7142857 0.0826786 4 0.756063 0.639592 0.116470 0.0039224 9.9814e-01 lowCoverage 0.30172 1.0000e+00 lowCoverage 0.0014225 9.9849e-01 lowCoverage 0.20321 1.00000000 lowCoverage 0.0878832 2.9255e-03 lowCoverage 0.358709 lowCoverage 0.807882 0.515933 0.2971419 5 0.799695 0.485004 0.314691 5.6288e-13 1.00000 hypermethylated 8.0411e-11 1 hypermethylated 6.9498e-07 1.00000 hypermethylated 1.3900e-04 1 hypermethylated 0.305594 9.8574e-04 lowCoverage 0.0754855 lowCoverage 0.807882 0.7142857 0.1109075 4 0.799695 0.639592 0.1601027 0.00018208 0.99983047 lowCoverage 0.030214 1.00000 lowCoverage 0.0019818 0.999717 lowCoverage 0.27839 1 lowCoverage 0.11351199 0.0010295 lowCoverage 0.31856 lowCoverage 0.515933 0.7142857 -0.1569109 4 0.485004 0.639592 -0.154588 0.92040 1.5465e-04 lowCoverage 1 1.0310e-02 lowCoverage 0.99545 2.0180e-03 lowCoverage 1 1.3582e-01 lowCoverage -0.1920815 1.4178e-02 lowCoverage 0.6751290 lowCoverage chr14 19334091 19335091 124217 OR4M1 ENSG00000176299 0.8458333 90 5 0.6722788 361 5 0.775000 48 5 0.8922222 53 5 0.733333 33 5 0.899352 137 5 0.5106061 56 5 0.8593350 88 5 0.8333333 30 5 0.732143 37 5 0.8361709 278 5 0.866667 19 1 0.856159 65 5 0.794444 30 2 0.7050420 54 5 0.251111 31 3 0.0000000 1 0 0.769209 57 5 0.771437 190 5 0.812827 173 5 0.822511 65 5 0.76792929 45 5 0.917727 105 5 0.8516667 68 5 1.0000000 18 1 0.8777590 327 5 0.736667 67 5 0.400000 14 0 0.771355 171 5 0.891386 300 5 0.801099 312 5 0.821632 130 5 0.488071 280 5 0.2435556 61 5 0.45979 393 5 0.5000000 4 0 0.467768 182 5 0.643206 203 5 0.8005556 81 5 0.8603782 89 5 0.844156 34 2 0.8857143 20 2 0.79750 54 3 0.844511 0.6792078 0.773740 0.886822 0.7383721 0.894964 0.5409619 0.834414 0.815891 0.7315199 0.823510 0.8604651 0.8506699 0.7774548 0.7054915 0.2189922 NA 0.74965 0.783543 0.802616 0.8124434 0.7549331 0.911601 0.853198 1.0000000 0.8672168 0.731105 0.476744 0.774029 0.890493 0.7986223 0.820762 0.4841592 0.2495607 0.410668 0.5130727 0.460626 0.650238 0.7887597 0.8520740 0.8171247 0.8671096 0.7768895 0 0.778809 0.833539 -0.0593174 5 0.776889 0.837986 -0.0610965 0.998821 2.4917e-02 weaklyHypometh 1 1.0000000 insignificant 0.98081 3.2246e-02 weaklyHypometh 1 1.000000 insignificant -0.0841524 0.212035 lowCoverage 1 lowCoverage 0.778809 0.544969 0.25147955 5 0.776889 0.535704 0.241185 5.8365e-11 1.00000 hypermethylated 3.6478e-09 1 hypermethylated 3.0391e-06 1.00000 hypermethylated 3.7989e-04 1 hypermethylated 0.253760 3.2901e-03 lowCoverage 0.2350085 lowCoverage 0.778809 0.8129496 -0.0379396 5 0.776889 0.830542 -0.053653 0.8099858 9.2052e-02 insignificant 1.00000 1.0000e+00 insignificant 0.8854892 4.7357e-02 weaklyHypometh 1.00000 1.00000000 insignificant -0.1168355 3.9335e-02 lowCoverage 1.000000 lowCoverage 0.833539 0.544969 0.3207199 5 0.837986 0.535704 0.302281 1.4132e-12 1.00000 hypermethylated 1.5702e-10 1 hypermethylated 1.9479e-07 1.00000 hypermethylated 4.8697e-05 1 hypermethylated 0.337913 3.5138e-04 lowCoverage 0.0390424 lowCoverage 0.833539 0.8129496 0.0210048 5 0.837986 0.830542 0.0074434 0.17976824 0.39740104 insignificant 1.000000 1.00000 insignificant 0.2024969 0.133211 insignificant 1.00000 1 insignificant -0.03268313 0.4867198 lowCoverage 1.00000 lowCoverage 0.544969 0.8129496 -0.2971235 5 0.535704 0.830542 -0.294838 1.00000 9.0021e-09 hypomethylated 1 1.5003e-06 hypomethylated 1.00000 8.2435e-06 hypomethylated 1 1.7702e-03 hypomethylated -0.3705959 5.1683e-04 lowCoverage 0.0738335 lowCoverage chr14 19334368 19335368 124218 OR4M1 ENSG00000176299 0.8458333 90 5 0.6722788 361 5 0.775000 48 5 0.8922222 53 5 0.733333 33 5 0.899352 137 5 0.5106061 56 5 0.8593350 88 5 0.8333333 30 5 0.732143 37 5 0.8361709 278 5 0.866667 19 1 0.856159 65 5 0.794444 30 2 0.7050420 54 5 0.251111 31 3 0.0000000 1 0 0.769209 57 5 0.771437 190 5 0.812827 173 5 0.822511 65 5 0.76792929 45 5 0.917727 105 5 0.8516667 68 5 1.0000000 18 1 0.8777590 327 5 0.736667 67 5 0.400000 14 0 0.771355 171 5 0.891386 300 5 0.801099 312 5 0.821632 130 5 0.488071 280 5 0.2435556 61 5 0.45979 393 5 0.5000000 4 0 0.467768 182 5 0.643206 203 5 0.8005556 81 5 0.8603782 89 5 0.844156 34 2 0.8857143 20 2 0.79750 54 3 0.844511 0.6792078 0.773740 0.886822 0.7383721 0.894964 0.5409619 0.834414 0.815891 0.7315199 0.823510 0.8604651 0.8506699 0.7774548 0.7054915 0.2189922 NA 0.74965 0.783543 0.802616 0.8124434 0.7549331 0.911601 0.853198 1.0000000 0.8672168 0.731105 0.476744 0.774029 0.890493 0.7986223 0.820762 0.4841592 0.2495607 0.410668 0.5130727 0.460626 0.650238 0.7887597 0.8520740 0.8171247 0.8671096 0.7768895 0 0.778809 0.833539 -0.0593174 5 0.776889 0.837986 -0.0610965 0.998821 2.4917e-02 weaklyHypometh 1 1.0000000 insignificant 0.98081 3.2246e-02 weaklyHypometh 1 1.000000 insignificant -0.0841524 0.212035 lowCoverage 1 lowCoverage 0.778809 0.544969 0.25147955 5 0.776889 0.535704 0.241185 5.8365e-11 1.00000 hypermethylated 3.6478e-09 1 hypermethylated 3.0391e-06 1.00000 hypermethylated 3.7989e-04 1 hypermethylated 0.253760 3.2901e-03 lowCoverage 0.2350085 lowCoverage 0.778809 0.8129496 -0.0379396 5 0.776889 0.830542 -0.053653 0.8099858 9.2052e-02 insignificant 1.00000 1.0000e+00 insignificant 0.8854892 4.7357e-02 weaklyHypometh 1.00000 1.00000000 insignificant -0.1168355 3.9335e-02 lowCoverage 1.000000 lowCoverage 0.833539 0.544969 0.3207199 5 0.837986 0.535704 0.302281 1.4132e-12 1.00000 hypermethylated 1.5702e-10 1 hypermethylated 1.9479e-07 1.00000 hypermethylated 4.8697e-05 1 hypermethylated 0.337913 3.5138e-04 lowCoverage 0.0390424 lowCoverage 0.833539 0.8129496 0.0210048 5 0.837986 0.830542 0.0074434 0.17976824 0.39740104 insignificant 1.000000 1.00000 insignificant 0.2024969 0.133211 insignificant 1.00000 1 insignificant -0.03268313 0.4867198 lowCoverage 1.00000 lowCoverage 0.544969 0.8129496 -0.2971235 5 0.535704 0.830542 -0.294838 1.00000 9.0021e-09 hypomethylated 1 1.5003e-06 hypomethylated 1.00000 8.2435e-06 hypomethylated 1 1.7702e-03 hypomethylated -0.3705959 5.1683e-04 lowCoverage 0.0738335 lowCoverage chr14 20260454 20261454 124241 ANG ENSG00000214274 0.7333863 516 13 0.5243345 323 13 0.419313 366 16 0.8148606 456 12 0.390033 222 10 0.539825 461 16 0.4749588 253 12 0.6095398 270 12 0.4622851 248 13 0.493671 199 13 0.6500363 463 16 0.475236 264 11 0.600699 309 13 NA 0 0 0.6609059 257 13 0.421585 331 10 0.4518197 229 12 0.659380 505 13 0.656934 297 13 0.734150 432 16 0.629655 167 12 0.85308188 245 12 0.663583 416 13 0.5537899 173 11 0.8369440 153 12 0.5870884 284 12 0.699686 202 12 0.645330 90 7 0.520283 167 12 0.530668 325 12 0.472641 362 15 0.813275 642 14 0.204927 317 15 0.2601715 354 16 0.25018 238 10 0.2133707 179 15 0.338532 117 11 0.426963 324 14 0.6845812 486 16 0.7271375 588 16 0.813019 454 16 0.7473250 408 16 0.75189 527 16 0.777243 0.5344708 0.426263 0.774888 0.3114201 0.549956 0.3341898 0.538524 0.363191 0.3647018 0.600356 0.3236754 0.5650014 NA 0.5374722 0.3086836 0.3376311 0.71099 0.524452 0.739926 0.7138978 0.7940567 0.624377 0.418724 0.7633173 0.5892468 0.601850 0.579028 0.523432 0.517916 0.5249366 0.761702 0.2273759 0.3415144 0.233979 0.2552248 0.438148 0.494443 0.6479199 0.7268640 0.8407887 0.6676913 0.7554089 11 0.554913 0.667700 -0.1022461 13 0.534791 0.625533 -0.0907418 0.994358 9.0843e-06 weaklyHypometh 1 0.0090843 weaklyHypometh 0.99999 1.8734e-05 weaklyHypometh 1 0.018734 weaklyHypometh -0.0835046 0.087120 insignificant 1 insignificant 0.555173 0.329627 0.22833543 13 0.566250 0.270155 0.296095 5.7970e-31 1.00000 hypermethylated 5.7970e-28 1 hypermethylated 9.1379e-14 1.00000 hypermethylated 9.1379e-11 1 hypermethylated 0.284641 3.2795e-05 hypermethylated 0.0054659 hypermethylated 0.555173 0.7632968 -0.1994185 13 0.566250 0.715672 -0.149422 0.9995379 6.1309e-09 weaklyHypometh 1.00000 6.1309e-06 weaklyHypometh 0.9610522 6.4319e-07 weaklyHypometh 1.00000 0.00064319 weaklyHypometh -0.1777926 7.6361e-05 weaklyHypometh 0.025454 weaklyHypometh 0.668011 0.329627 0.3207640 13 0.642721 0.270155 0.372566 7.7919e-29 1.00000 hypermethylated 7.7919e-26 1 hypermethylated 3.0053e-19 1.00000 hypermethylated 3.0053e-16 1 hypermethylated 0.368145 3.6981e-06 hypermethylated 0.0012327 hypermethylated 0.668011 0.7632968 -0.0832489 13 0.642721 0.715672 -0.0729503 0.99990465 0.00443545 weaklyHypometh 1.000000 1.00000 insignificant 0.9406086 0.026539 weaklyHypometh 1.00000 1 insignificant -0.09428798 0.0425565 weaklyHypometh 1.00000 insignificant 0.329627 0.7632968 -0.4215016 13 0.270155 0.715672 -0.445517 1.00000 5.1487e-34 hypomethylated 1 5.1487e-31 hypomethylated 1.00000 6.8914e-17 hypomethylated 1 6.8914e-14 hypomethylated -0.4624332 3.3481e-06 hypomethylated 0.0016740 hypomethylated chr14 22539578 22540578 124316 C14orf93 ENSG00000100802 0.6929678 170 5 0.4391688 92 5 0.470633 78 5 0.6849052 102 5 0.541123 56 5 0.623421 222 5 0.4821078 71 5 0.5750000 64 5 0.4732692 52 5 0.562688 55 5 0.7044613 154 5 0.560812 55 5 0.604820 63 5 0.750000 4 0 0.5402339 74 5 0.522222 58 5 0.3833333 43 5 0.675165 125 5 0.675156 131 5 0.659954 174 5 0.624603 41 4 0.57844215 67 5 0.625779 104 5 0.6440989 54 5 0.6142857 29 3 0.6158687 148 5 0.536364 39 3 0.644188 48 5 0.573675 74 5 0.638027 173 5 0.614693 141 5 0.573925 175 5 0.601103 113 5 0.4708202 100 5 0.72146 101 5 0.5812698 54 5 0.597436 73 5 0.599782 146 5 0.6746062 141 5 0.6846107 173 5 0.726807 117 5 0.6679201 170 5 0.75170 181 5 0.709066 0.4929691 0.530221 0.728013 0.5934471 0.717773 0.5481202 0.657274 0.550988 0.6617748 0.714672 0.6101025 0.6346309 NA 0.6369977 0.5838430 0.4449541 0.68339 0.733566 0.729145 0.6955912 0.6363018 0.690549 0.708781 0.7178899 0.6752311 0.546706 0.726671 0.643609 0.702377 0.6899725 0.655894 0.6269395 0.5057744 0.713338 0.6075433 0.625147 0.649490 0.6926293 0.6944541 0.7525299 0.6916691 0.7867149 3 0.673359 0.695334 -0.0099292 5 0.617684 0.608463 0.0092202 0.410444 2.3518e-01 insignificant 1 1.0000000 insignificant 0.88669 1.0184e-02 weaklyHypometh 1 1.000000 insignificant -0.0259238 0.301927 lowCoverage 1 lowCoverage 0.673359 0.635434 0.04137148 5 0.617684 0.592866 0.024817 6.7068e-02 0.71694 insignificant 1.0000e+00 1 insignificant 3.8051e-01 0.18956 insignificant 1.0000e+00 1 insignificant -0.014239 7.2615e-01 lowCoverage 1.0000000 lowCoverage 0.673359 0.7250639 -0.0638836 5 0.617684 0.703586 -0.085903 0.9911591 1.1795e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9988960 1.3677e-03 weaklyHypometh 1.00000 0.48365073 insignificant -0.1200563 3.6559e-04 lowCoverage 0.060932 lowCoverage 0.695334 0.635434 0.0578696 5 0.608463 0.592866 0.015597 3.8279e-03 0.30888 weaklyHypermeth 9.8153e-02 1 weaklyHypermeth 1.3895e-03 0.21679 weaklyHypermeth 4.9818e-02 1 weaklyHypermeth 0.011685 7.4242e-01 lowCoverage 1.0000000 lowCoverage 0.695334 0.7250639 -0.0454715 5 0.608463 0.703586 -0.0951229 0.79728840 0.00017359 weaklyHypometh 1.000000 0.17359 insignificant 0.7221376 0.014279 weaklyHypometh 1.00000 1 insignificant -0.09413251 0.0015928 lowCoverage 0.31856 lowCoverage 0.635434 0.7250639 -0.1025179 5 0.592866 0.703586 -0.110720 0.99867 2.5975e-04 weaklyHypometh 1 1.5279e-02 weaklyHypometh 0.98891 4.2876e-03 weaklyHypometh 1 2.3820e-01 insignificant -0.1058173 2.1720e-02 weaklyHypometh 0.8688030 insignificant chr14 23907678 23908678 124389 NFATC4 ENSG00000100968 0.0075879 712 24 0.0074355 555 26 0.020763 1035 26 0.0052754 405 19 0.022513 587 26 0.066223 871 26 0.0031309 922 26 0.0086408 642 25 0.0037640 780 26 0.036768 976 26 0.0071908 971 26 0.005523 1101 26 0.072417 699 26 0.071429 326 13 0.0050337 1078 24 0.017742 879 26 0.0064329 742 24 0.012346 582 24 0.034551 478 24 0.024928 820 27 0.016522 346 24 0.00082713 504 21 0.032904 645 26 0.0075959 365 24 0.0034596 369 14 0.0029729 861 26 0.034876 543 22 0.026766 544 22 0.039702 459 24 0.015078 821 26 0.041301 811 26 0.017153 927 26 0.043245 525 26 0.0043724 449 24 0.04939 701 21 0.0041610 269 22 0.070655 314 17 0.027525 585 26 0.0044636 925 26 0.0049858 758 24 0.038314 412 19 0.0095157 619 24 0.03836 531 25 0.012815 0.0086808 0.031817 0.010272 0.0016751 0.029434 0.0061436 0.013028 0.006493 0.0041758 0.011042 0.0043097 0.0096856 0.0010433 0.0028853 0.0021543 0.0098743 0.00000 0.004034 0.037239 0.0053238 0.0017124 0.032608 0.011510 0.0059934 0.0048837 0.015784 0.016516 0.032818 0.020972 0.0080504 0.027087 0.0086001 0.0070604 0.042058 0.0065704 0.045538 0.011830 0.0075919 0.0078435 0.0018484 0.0089106 0.0049470 16 0.010356 0.014177 -0.0031281 26 0.025916 0.032647 -0.0067311 0.599592 2.0203e-02 weaklyHypometh 1 1.0000000 insignificant 0.79970 1.4091e-01 insignificant 1 1.000000 insignificant 0.0020549 0.760455 insignificant 1 insignificant 0.010356 0.011607 -0.00096855 26 0.025916 0.054952 -0.029036 4.7486e-01 0.98604 insignificant 1.0000e+00 1 insignificant 6.8900e-01 0.95499 insignificant 1.0000e+00 1 insignificant -0.011240 3.7539e-01 insignificant 1.0000000 insignificant 0.010300 0.0070878 0.0043572 24 0.024614 0.042228 -0.017614 0.2936012 9.6631e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4865708 9.9078e-01 insignificant 1.00000 1.00000000 insignificant 0.0028569 7.6949e-01 insignificant 1.000000 insignificant 0.014177 0.011607 0.0027262 26 0.032647 0.054952 -0.022305 4.9284e-01 0.99032 insignificant 1.0000e+00 1 insignificant 7.3640e-01 0.99839 insignificant 1.0000e+00 1 insignificant -0.013295 2.9048e-01 insignificant 1.0000000 insignificant 0.013651 0.0070878 0.0066814 24 0.017046 0.042228 -0.0251816 0.28801578 0.99394559 insignificant 1.000000 1.00000 insignificant 0.5190105 0.998544 insignificant 1.00000 1 insignificant 0.00080195 0.9314728 insignificant 1.00000 insignificant 0.010919 0.0070878 0.0042796 24 0.014171 0.042228 -0.028056 0.99874 9.9883e-01 insignificant 1 1.0000e+00 insignificant 0.99865 9.9989e-01 insignificant 1 1.0000e+00 insignificant 0.0140970 3.1921e-01 insignificant 1.0000000 insignificant chr14 25144732 25145732 124482 ENSG00000179020 0.7623034 315 9 0.6512123 186 9 0.619582 151 9 0.7441757 191 8 0.689796 64 7 0.806417 405 9 0.6272727 75 7 0.7015258 175 7 0.6425189 107 7 0.752834 62 7 0.6281459 300 7 0.857143 23 0 0.822464 74 5 0.831169 72 7 0.7328650 107 7 0.500000 14 0 0.7142857 16 0 0.807838 252 9 0.710041 166 7 0.838960 296 9 0.730159 61 7 0.70333952 78 7 0.730188 143 9 0.6600529 69 7 0.8544789 63 5 0.7286703 211 9 0.832039 89 6 0.375000 37 2 0.699471 97 7 0.755172 248 9 0.689624 229 9 0.678043 372 9 0.611931 275 9 0.5724414 159 7 0.65860 202 9 0.4523810 18 0 0.659382 102 7 0.586917 229 9 0.7633994 274 8 0.7343998 295 8 0.828702 276 8 0.7536562 160 8 0.73715 275 8 0.705553 0.5856974 0.601229 0.745650 0.6897638 0.761100 0.6426628 0.716059 0.609043 0.7513186 0.760073 0.8740157 0.7703412 0.8371510 0.7024477 0.4960630 0.6929134 0.70039 0.806182 0.749858 0.7898763 0.6984661 0.710954 0.715129 0.8648386 0.6871783 0.822578 0.697825 0.694284 0.671823 0.6741552 0.674416 0.6336184 0.5713583 0.590269 0.4146982 0.656753 0.653782 0.6982528 0.7228369 0.7959458 0.7211459 0.7666414 0 0.738774 0.725987 0.0215644 8 0.752322 0.658537 0.0937845 0.042023 7.3848e-01 weaklyHypermeth 1 1.0000000 insignificant 0.22578 8.0361e-01 insignificant 1 1.000000 insignificant 0.0190078 0.639930 insignificant 1 insignificant 0.738401 0.627411 0.10716099 8 0.740286 0.609066 0.131220 2.8327e-08 0.99773 weaklyHypermeth 1.2316e-06 1 weaklyHypermeth 3.3408e-05 0.99513 weaklyHypermeth 1.8560e-03 1 weaklyHypermeth 0.131751 5.6911e-03 weaklyHypermeth 0.3249434 insignificant 0.738401 0.7875000 -0.0292496 8 0.740286 0.779616 -0.039330 0.9620268 7.7301e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9682589 2.7758e-01 insignificant 1.00000 1.00000000 insignificant -0.0414334 1.4169e-01 insignificant 1.000000 insignificant 0.727488 0.627411 0.0962961 9 0.706911 0.609066 0.097846 5.8752e-06 0.99990 weaklyHypermeth 2.4032e-04 1 weaklyHypermeth 1.8248e-04 0.99997 weaklyHypermeth 1.0138e-02 1 weaklyHypermeth 0.112744 2.8311e-02 weaklyHypermeth 1.0000000 insignificant 0.727488 0.7875000 -0.0509224 8 0.706911 0.779616 -0.0727048 0.88903947 0.00240305 weaklyHypometh 1.000000 1.00000 insignificant 0.8720437 0.068557 insignificant 1.00000 1 insignificant -0.06044113 0.1357952 insignificant 1.00000 insignificant 0.627411 0.7875000 -0.1306813 8 0.609066 0.779616 -0.170550 0.99983 2.3756e-07 weaklyHypometh 1 2.9853e-05 weaklyHypometh 0.99988 8.8510e-06 weaklyHypometh 1 1.7702e-03 weaklyHypometh -0.1731848 1.4488e-03 weaklyHypometh 0.1609764 insignificant chr14 27522891 27523891 124874 ENSG00000222899 0.7239803 370 11 0.6436423 142 11 0.575738 105 11 0.7370049 258 11 0.735185 77 7 0.725996 351 11 0.6462418 105 10 0.5642559 129 10 0.5998131 92 10 0.826524 113 11 0.6634426 347 11 0.625595 68 7 0.712522 154 10 0.833333 28 2 0.7341975 155 11 0.608586 43 3 0.6220798 77 6 0.717882 240 11 0.739749 155 10 0.743910 264 11 0.811508 68 7 0.78030303 52 3 0.718844 192 11 0.6951659 62 3 0.8587121 88 7 0.6169013 203 11 0.917072 71 3 0.870370 21 1 0.745985 108 7 0.702394 188 11 0.776467 145 10 0.726898 409 11 0.582127 127 10 0.6707431 129 11 0.62720 217 11 0.7138496 118 9 0.654514 69 7 0.623764 199 11 0.7634963 232 11 0.8044278 352 11 0.747705 255 11 0.7738993 258 11 0.78845 331 11 0.767435 0.7183760 0.646146 0.767290 0.7692108 0.771002 0.6755276 0.772898 0.687578 0.8511728 0.794447 0.6968285 0.7977207 0.8202272 0.7739378 0.6766615 0.6978534 0.75964 0.812771 0.789130 0.8552514 0.7767579 0.787210 0.720720 0.8554470 0.7250793 0.857289 0.823518 0.759361 0.765214 0.8040016 0.769471 0.6793930 0.7223057 0.661034 0.7658554 0.776607 0.684200 0.8036509 0.8265267 0.7998420 0.8333738 0.8289037 3 0.732661 0.754823 -0.0140059 11 0.666352 0.786526 -0.1201735 0.977768 1.0021e-01 insignificant 1 1.0000000 insignificant 0.99701 6.1109e-03 weaklyHypometh 1 1.000000 insignificant -0.0794010 0.014984 weaklyHypometh 1 insignificant 0.732946 0.669383 0.06334921 11 0.679149 0.627883 0.051265 4.3134e-04 0.99548 weaklyHypermeth 1.1351e-02 1 weaklyHypermeth 1.6397e-02 0.99417 weaklyHypermeth 4.5548e-01 1 insignificant 0.043617 1.0448e-01 insignificant 1.0000000 insignificant 0.732661 0.7794118 -0.0595205 11 0.666352 0.752778 -0.086426 0.9999216 2.2517e-03 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.9999743 1.4510e-03 weaklyHypometh 1.00000 0.48365073 insignificant -0.0866119 2.3120e-04 weaklyHypometh 0.057801 weaklyHypometh 0.754670 0.669383 0.0747534 11 0.770105 0.627883 0.142222 5.6111e-04 1.00000 weaklyHypermeth 1.6503e-02 1 weaklyHypermeth 1.6017e-04 1.00000 weaklyHypermeth 9.4216e-03 1 weaklyHypermeth 0.123018 1.0568e-03 weaklyHypermeth 0.0754855 weaklyHypermeth 0.754823 0.7794118 -0.0441454 11 0.786526 0.752778 0.0337474 0.99998350 0.15839864 insignificant 1.000000 1.00000 insignificant 0.9872507 0.775956 insignificant 1.00000 1 insignificant -0.00721084 0.7896481 insignificant 1.00000 insignificant 0.669383 0.7799580 -0.1235401 11 0.627883 0.810684 -0.182801 1.00000 1.0290e-06 weaklyHypometh 1 1.0290e-04 weaklyHypometh 1.00000 2.9619e-05 weaklyHypometh 1 4.2313e-03 weaklyHypometh -0.1302289 3.3040e-04 weaklyHypometh 0.0738335 weaklyHypometh chr14 29836519 29837519 125248 PRKD1 ENSG00000184304 0.74123 309 11 0.60278 153 11 0.65789 163 9 0.72728 209 12 0.67823 66 7 0.60692 394 11 0.46399 161 8 0.54006 155 9 0.54940 147 8 0.69795 134 8 0.68132 246 10 0.62325 110 8 0.69899 175 11 0.75000 4 0 0.71627 158 9 0.51111 51 6 0.59903 96 8 0.74059 212 9 0.73396 205 9 0.67162 410 11 0.74802 129 6 0.76285 122 8 0.63325 287 12 0.61111 106 7 0.67755 94 9 0.63954 196 10 0.62240 198 9 0.70253 109 7 0.54313 129 9 0.75660 258 9 0.56990 235 9 0.65252 386 11 0.51765 166 9 0.44556 120 9 0.65581 151 8 0.64792 105 7 0.54346 210 8 0.66734 251 9 0.77266 362 10 0.68076 307 9 0.60741 234 9 0.74309 335 9 0.56906 328 9 0.69472 0.61976 0.62423 0.66586 0.63345 0.62575 0.57707 0.60280 0.60255 0.65557 0.65764 0.54405 0.64594 NA 0.69119 0.57951 0.57537 0.68800 0.64525 0.60702 0.68303 0.69066 0.57652 0.57904 0.60981 0.62461 0.52527 0.57696 0.50838 0.69488 0.57779 0.65905 0.53594 0.52445 0.58004 0.59530 0.53286 0.58678 0.68604 0.68790 0.60703 0.74104 0.70131 7 0.66695 0.64429 0.0195673 9 0.67290 0.65340 0.0195043 0.05620 0.860721 insignificant 1 1 insignificant 0.33981 0.35965530 insignificant 1 1.00000 insignificant -0.010355 0.7141459 insignificant 1 insignificant 0.66695 0.55234 0.078085 9 0.67290 0.58603 0.086866 4.2247e-07 0.98945 weaklyHypermeth 0.00014082 1 weaklyHypermeth 0.00060337 0.94355 weaklyHypermeth 0.15084 1 insignificant 0.0699732 0.13214 insignificant 1 insignificant 0.66695 0.69860 -0.052170 9 0.67290 0.72092 -0.048017 0.99371 7.7699e-05 weaklyHypometh 1 0.077699 weaklyHypometh 0.99321 6.1617e-04 weaklyHypometh 1 0.3080847 insignificant -0.025002 5.8244e-01 insignificant 1.0000000 insignificant 0.64429 0.55234 0.055291 9 0.65340 0.58603 0.067362 2.4943e-03 0.99825 weaklyHypermeth 0.36541360 1 insignificant 1.9613e-02 0.99933 weaklyHypermeth 1.000000 1 insignificant 0.080329 0.094231 insignificant 1 insignificant 0.64429 0.69860 -0.075358 9 0.65340 0.72092 -0.067522 0.99985 1.2901e-05 weaklyHypometh 1 0.012901 weaklyHypometh 0.99686 0.0011309 weaklyHypometh 1 1 insignificant -0.014646 0.74935 insignificant 1 insignificant 0.55234 0.69860 -0.138708 9 0.58603 0.72092 -0.134883 0.99987 1.0949e-08 weaklyHypometh 1 5.4745e-06 weaklyHypometh 0.99942 1.0377e-05 weaklyHypometh 1 0.00518841 weaklyHypometh -0.094975 0.1111364 insignificant 1 insignificant chr14 32616135 32617135 125568 NPAS3 ENSG00000151322 0.61708 309 7 0.59160 160 7 0.58418 50 4 0.76229 258 7 0.67002 114 7 0.66453 168 7 0.54832 104 7 0.62332 104 7 0.64050 66 4 0.70697 48 7 0.68344 211 7 0.64286 41 5 0.57032 133 7 0.58833 90 7 0.63265 81 7 0.48571 34 5 0.65000 11 0 0.59174 338 10 0.61745 129 4 0.65925 133 7 0.57653 36 4 0.95238 15 0 0.59581 197 7 0.52103 57 9 0.74569 79 5 0.67321 157 7 0.66328 66 7 0.42857 13 0 0.81455 136 4 0.56958 178 7 0.67800 160 7 0.70453 130 7 0.58727 128 7 0.52890 62 7 0.53887 192 7 0.74286 17 1 0.42727 100 7 0.66512 133 7 0.53011 320 7 0.45457 298 7 0.66462 296 7 0.60679 297 4 0.70339 271 7 0.67651 0.65113 0.55888 0.66433 0.65394 0.65873 0.55732 0.61926 0.63709 0.66711 0.68352 0.63636 0.58678 0.63970 0.65967 0.47603 0.62908 0.69745 0.64948 0.66926 0.53788 0.96970 0.63492 0.53291 0.71687 0.66567 0.70354 0.35262 0.74805 0.61525 0.66810 0.65643 0.59173 0.55130 0.50138 0.69587 0.44187 0.58646 0.67412 0.64291 0.65211 0.63613 0.69651 1 0.61550 0.59314 -0.0022727 7 0.59715 0.62857 -0.0314176 0.65310 0.333023 insignificant 1 1 insignificant 0.86586 0.32685423 insignificant 1 1.00000 insignificant -0.033736 0.4379508 insignificant 1 insignificant 0.61309 0.52690 0.094581 7 0.55744 0.57860 -0.021162 1.9623e-06 0.74124 weaklyHypermeth 0.00049058 1 weaklyHypermeth 0.07802884 0.97226 insignificant 1.00000 1 insignificant 0.0448148 0.37962 insignificant 1 insignificant 0.61309 0.64912 -0.017869 7 0.55744 0.60328 -0.045846 0.96545 2.3987e-01 insignificant 1 1.000000 insignificant 0.84041 6.7992e-01 insignificant 1 1.0000000 insignificant 0.034631 4.9631e-01 insignificant 1.0000000 insignificant 0.59314 0.52615 0.091835 7 0.62857 0.53178 0.096794 4.7747e-04 0.99594 weaklyHypermeth 0.09549481 1 weaklyHypermeth 6.3448e-02 0.99981 insignificant 1.000000 1 insignificant 0.078550 0.217073 insignificant 1 insignificant 0.59314 0.64953 -0.012893 7 0.62857 0.61476 0.013811 0.71990 4.8710e-01 insignificant 1 1.000000 insignificant 0.39778 0.9126893 insignificant 1 1 insignificant 0.068367 0.28201 insignificant 1 insignificant 0.52690 0.64912 -0.112997 7 0.57860 0.60328 -0.024684 0.93905 6.1656e-04 weaklyHypometh 1 1.4863e-01 insignificant 0.95277 1.8305e-01 insignificant 1 1.00000000 insignificant -0.010183 0.8768740 insignificant 1 insignificant chr14 32984561 32985561 125704 NPAS3 ENSG00000151322 0.79669 540 18 0.75185 370 18 0.60905 235 17 0.77933 299 16 0.69228 135 14 0.72910 482 18 0.70328 180 17 0.73451 287 15 0.75855 188 18 0.88406 188 14 0.82198 703 18 0.69235 125 13 0.75185 362 18 0.67963 39 6 0.76232 234 18 0.73001 111 10 0.61538 90 8 0.79215 297 18 0.81815 334 17 0.83259 346 18 0.86031 100 9 0.68374 128 11 0.79884 271 18 0.79745 164 15 0.87051 85 12 0.82031 520 18 0.83457 190 14 0.81713 55 4 0.85772 282 18 0.83148 509 18 0.78396 421 18 0.76976 661 18 0.74090 294 17 0.70459 314 18 0.71587 344 18 0.83644 90 8 0.68460 154 14 0.78168 540 18 0.84222 314 16 0.83763 555 18 0.86269 296 16 0.82329 338 15 0.82760 387 16 0.82020 0.71933 0.65392 0.78207 0.75776 0.74740 0.72716 0.78843 0.83206 0.87745 0.84568 0.73782 0.83222 0.76610 0.79663 0.76089 0.74674 0.83715 0.81566 0.84393 0.82174 0.70207 0.82380 0.80267 0.90424 0.84240 0.84333 0.83573 0.84575 0.81582 0.80503 0.79119 0.74102 0.69616 0.73207 0.81994 0.72497 0.79462 0.83648 0.84173 0.89120 0.83517 0.82958 4 0.79549 0.83107 -0.0227292 18 0.76407 0.81781 -0.0537402 0.99918 0.076809 insignificant 1 1 insignificant 0.99998 0.00051308 weaklyHypometh 1 0.51308 insignificant -0.063726 0.0057816 weaklyHypometh 1 insignificant 0.79534 0.77477 0.041719 18 0.73923 0.75598 -0.016747 1.1674e-03 0.99987 weaklyHypermeth 0.19457370 1 insignificant 0.06136296 0.85954 insignificant 1.00000 1 insignificant 0.0027436 0.92323 insignificant 1 insignificant 0.79534 0.81640 -0.052680 18 0.73923 0.84406 -0.104822 1.00000 9.1462e-04 weaklyHypometh 1 0.457308 insignificant 1.00000 6.5556e-06 weaklyHypometh 1 0.0065556 weaklyHypometh -0.091932 1.7666e-05 weaklyHypometh 0.0088332 weaklyHypometh 0.83102 0.77477 0.065016 18 0.81618 0.75598 0.060194 3.9736e-07 1.00000 weaklyHypermeth 0.00019868 1 weaklyHypermeth 5.4294e-05 1.00000 weaklyHypermeth 0.027147 1 weaklyHypermeth 0.066469 0.036849 weaklyHypermeth 1 insignificant 0.83102 0.81640 -0.029163 18 0.81618 0.84406 -0.027881 0.99945 5.4351e-02 insignificant 1 1.000000 insignificant 0.99890 0.1204272 insignificant 1 1 insignificant -0.028206 0.10214 insignificant 1 insignificant 0.77477 0.81640 -0.089397 18 0.75598 0.84406 -0.088075 1.00000 1.0217e-09 weaklyHypometh 1 1.0217e-06 weaklyHypometh 1.00000 3.3376e-07 weaklyHypometh 1 0.00033376 weaklyHypometh -0.094675 0.0078867 weaklyHypometh 1 insignificant chr14 34972498 34973498 125952 NFKBIA ENSG00000100906 0.77107 141 5 0.67611 95 4 0.49745 37 3 0.75866 95 5 0.63810 44 6 0.49565 234 7 0.71000 55 4 0.82155 68 4 0.63926 60 4 0.61837 43 3 0.62926 127 4 0.85459 29 3 0.82143 76 4 0.91667 14 2 0.72917 49 4 0.85185 19 2 0.79195 133 3 0.85288 99 5 0.81402 51 5 0.49799 150 4 0.46313 31 3 0.75139 37 4 0.73904 96 5 0.68684 41 4 0.63571 21 3 0.62158 157 7 0.77857 26 3 0.71429 21 3 0.66816 53 4 0.65337 145 7 0.80850 127 5 0.78806 217 5 0.75775 65 4 0.61023 70 4 0.45116 118 6 0.64358 29 2 0.76962 53 4 0.52668 106 5 0.77667 163 5 0.87364 143 5 0.72960 123 5 0.69953 99 3 0.64011 109 6 0.69899 0.63656 0.55760 0.76139 0.81613 0.61755 0.61613 0.73200 0.68567 0.74009 0.60052 0.63825 0.76613 0.71732 0.68817 0.82140 0.72839 0.72396 0.69179 0.71497 0.52356 0.57177 0.80867 0.73093 0.57143 0.72913 0.66313 0.69585 0.68404 0.72177 0.75671 0.69257 0.58022 0.51047 0.64836 0.61486 0.70298 0.73059 0.75557 0.80580 0.66682 0.71515 0.69039 2 0.72604 0.72428 0.0056757 5 0.67872 0.67084 0.0078846 0.61419 0.660174 insignificant 1 1 insignificant 0.37282 0.73467740 insignificant 1 1.00000 insignificant 0.026914 0.5032936 lowCoverage 1 lowCoverage 0.72604 0.66213 0.067982 5 0.67872 0.47345 0.205274 5.9455e-02 0.99919 insignificant 1.00000000 1 insignificant 0.02372248 0.99122 weaklyHypermeth 1.00000 1 insignificant 0.0927963 0.15136 lowCoverage 1 lowCoverage 0.72604 0.78964 -0.058552 5 0.67872 0.73571 -0.056992 0.99553 8.6356e-02 insignificant 1 1.000000 insignificant 0.94853 5.0887e-01 insignificant 1 1.0000000 insignificant -0.024613 6.2529e-01 lowCoverage 1.0000000 lowCoverage 0.72428 0.66213 0.060185 5 0.67084 0.47345 0.197389 1.2812e-01 0.99334 insignificant 1.00000000 1 insignificant 9.4912e-02 0.94573 insignificant 1.000000 1 insignificant 0.065883 0.290305 lowCoverage 1 lowCoverage 0.72428 0.78964 -0.069702 5 0.67084 0.73571 -0.064876 0.92596 1.9760e-02 weaklyHypometh 1 1.000000 insignificant 0.93725 0.2233170 insignificant 1 1 insignificant -0.051527 0.31281 lowCoverage 1 lowCoverage 0.66213 0.78964 -0.137048 5 0.47345 0.73571 -0.262266 0.99996 1.3408e-03 weaklyHypometh 1 2.2347e-01 insignificant 0.99924 7.4870e-03 weaklyHypometh 1 1.00000000 insignificant -0.117410 0.1033351 lowCoverage 1 lowCoverage chr14 36257980 36258980 126147 PAX9 ENSG00000198807 0.86844 249 5 0.81365 415 5 0.87455 148 5 0.94884 277 5 0.96843 108 5 0.90643 409 5 0.87984 200 5 0.82971 279 5 0.79209 171 5 0.92155 75 5 0.87983 434 5 0.83149 47 5 0.91890 177 5 0.95009 97 5 0.91741 258 5 0.82621 117 5 NA 0 0 0.87212 276 5 0.89568 414 5 0.87130 237 5 0.98182 45 5 0.90416 91 5 0.94606 167 5 0.80678 102 5 0.89556 48 5 0.91776 387 5 0.87449 166 5 0.82551 74 5 0.85669 388 5 0.93172 400 5 0.91098 375 5 0.88468 311 5 0.55591 231 5 0.25667 101 5 0.00000 64 2 0.500000 2 0 0.51819 264 5 0.55825 350 5 0.91110 271 5 0.95358 180 5 0.92680 214 5 0.94133 185 5 0.96063 270 5 0.86690 0.81612 0.87615 0.95061 0.96679 0.90669 0.85234 0.83103 0.79679 0.92060 0.88232 0.81972 0.92029 0.93733 0.91937 0.81157 NA 0.86841 0.90010 0.87598 0.98003 0.90764 0.94173 0.80140 0.90332 0.91879 0.87483 0.77818 0.85787 0.93179 0.90980 0.88675 0.560413 0.255539 0.26079 0.480482 0.52241 0.553168 0.91339 0.95244 0.92607 0.94105 0.96059 5 0.88355 0.89781 -0.0141836 5 0.90181 0.91493 -0.013118 0.990165 0.253387 insignificant 1 1 insignificant 0.977240 0.583607 insignificant 1 1 insignificant -0.012232 0.507563 lowCoverage 1 lowCoverage 0.88349 0.48024 0.403288 5 0.88217 0.48942 0.392748 6.5256e-31 1.00000 hypermethylated 3.2628e-28 1 hypermethylated 4.6963e-10 1.00000 hypermethylated 2.3482e-07 1 hypermethylated 0.484282 3.1107e-03 lowCoverage 0.777684 lowCoverage 0.88349 0.93661 -0.052639 5 0.88217 0.93693 -0.054757 9.9992e-01 1.3173e-03 weaklyHypometh 1.0000e+00 0.658658 insignificant 9.9995e-01 0.00310916 weaklyHypometh 1.0000e+00 0.72954 insignificant -0.056237 1.1219e-03 lowCoverage 0.3739803 lowCoverage 0.89777 0.48024 0.41744 5 0.89791 0.48942 0.408489 8.9627e-25 1.00000 hypermethylated 4.4814e-22 1 hypermethylated 1.3804e-09 1.00000 hypermethylated 6.9020e-07 1 hypermethylated 0.4965141 2.6899e-03 lowCoverage 0.9260027 lowCoverage 0.89777 0.93661 -0.039005 5 0.89791 0.93693 -0.039016 9.9931e-01 0.0102888 weaklyHypometh 1.0000e+00 1 insignificant 9.9700e-01 0.0203676 weaklyHypometh 1.00000000 1 insignificant -0.044004 0.019829 weaklyHypometh 1 insignificant 0.48024 0.93661 -0.45643 5 0.48942 0.93693 -0.44750 1.00000 5.8985e-14 hypomethylated 1 2.9492e-11 hypomethylated 1.0000 1.1883e-06 hypomethylated 1 5.9416e-04 hypomethylated -0.54052 0.00194228 lowCoverage 0.97114 lowCoverage chr14 41429408 41430408 126522 LRFN5 ENSG00000165379 0.79816 302 8 0.68796 144 8 0.62359 128 8 0.84712 169 8 0.87396 48 4 0.69990 338 8 0.77376 108 8 0.73573 84 5 0.74640 72 6 0.78393 50 6 0.79118 232 8 0.68901 68 7 0.74276 114 7 0.83333 13 2 0.78799 119 8 0.71880 57 7 0.77620 77 7 0.74765 172 8 0.75397 163 8 0.81697 280 8 0.89137 36 4 0.78299 59 7 0.77656 180 8 0.83360 58 5 0.85942 58 5 0.80397 186 8 0.76626 70 5 0.93750 47 5 0.71359 117 7 0.83080 161 8 0.84710 193 8 0.80861 354 8 0.61482 99 6 0.60404 124 8 0.62946 175 8 0.845013 74 7 0.68873 68 7 0.74422 190 8 0.84582 227 8 0.88557 317 8 0.86821 182 8 0.85453 271 8 0.84632 296 8 0.79363 0.74546 0.66665 0.87795 0.85530 0.80599 0.78533 0.77287 0.74815 0.83190 0.80290 0.82326 0.74104 0.80418 0.82006 0.74737 0.75545 0.75141 0.77744 0.79599 0.87430 0.76591 0.81464 0.82494 0.82572 0.79462 0.72589 0.93318 0.71257 0.85109 0.84696 0.72401 0.612381 0.578907 0.63720 0.780223 0.77289 0.736260 0.83947 0.89062 0.87196 0.85671 0.85384 4 0.78524 0.79131 -0.0084388 8 0.77330 0.84203 -0.068732 0.990995 0.524970 insignificant 1 1 insignificant 0.999646 0.083525 insignificant 1 1 insignificant -0.059564 0.012056 weaklyHypometh 1 insignificant 0.78558 0.69041 0.093590 8 0.77162 0.68324 0.088383 5.8338e-06 0.99855 weaklyHypermeth 9.7231e-04 1 weaklyHypermeth 5.3967e-03 0.99286 weaklyHypermeth 5.9964e-01 1 insignificant 0.073704 1.1593e-01 insignificant 1.000000 insignificant 0.78509 0.86079 -0.079070 8 0.72292 0.87075 -0.147833 1.0000e+00 3.5352e-05 weaklyHypometh 1.0000e+00 0.035352 weaklyHypometh 1.0000e+00 0.00044129 weaklyHypometh 1.0000e+00 0.42488 insignificant -0.098673 1.8186e-06 weaklyHypometh 0.0018186 weaklyHypometh 0.79048 0.69041 0.10168 8 0.78279 0.68324 0.099556 1.5096e-05 0.99927 weaklyHypermeth 3.0192e-03 1 weaklyHypermeth 1.1356e-04 0.99965 weaklyHypermeth 2.8391e-02 1 weaklyHypermeth 0.1332678 1.5073e-02 weaklyHypermeth 1.0000000 insignificant 0.79090 0.86079 -0.073669 8 0.80693 0.87075 -0.063827 9.9991e-01 0.0013113 weaklyHypometh 1.0000e+00 1 insignificant 9.6397e-01 0.0159470 weaklyHypometh 1.00000000 1 insignificant -0.039109 0.056554 insignificant 1 insignificant 0.69041 0.86057 -0.17401 8 0.68324 0.85460 -0.17136 1.00000 3.1588e-07 weaklyHypometh 1 1.0529e-04 weaklyHypometh 1.0000 9.5044e-05 weaklyHypometh 1 3.1681e-02 weaklyHypometh -0.17238 0.00570146 weaklyHypometh 1.00000 insignificant chr14 45855520 45856520 126702 ENSG00000199739 0.79470 194 5 0.82168 109 5 0.70493 91 5 0.79242 71 5 0.74909 53 5 0.81219 208 5 0.82327 54 5 0.82758 76 5 0.75341 66 5 0.78697 54 5 0.83520 98 5 0.74727 45 5 0.87816 80 4 NA 0 0 0.87313 90 5 0.89563 40 5 0.69370 72 5 0.77955 116 5 0.83290 114 5 0.86469 206 5 0.61000 16 2 0.49167 18 3 0.81773 126 5 0.67917 16 1 0.77679 25 3 0.81000 90 5 0.85893 33 3 0.80227 33 3 0.75801 66 5 0.81541 90 5 0.82241 140 5 0.80403 239 5 0.82620 54 5 0.63635 83 5 0.67827 110 5 0.920330 46 4 0.67426 72 5 0.75693 140 5 0.86689 232 5 0.83960 205 5 0.82779 122 5 0.83647 165 5 0.88611 176 5 0.84886 0.84466 0.75674 0.83486 0.78470 0.88942 0.88838 0.92053 0.78360 0.89779 0.87972 0.81638 0.84603 NA 0.94221 0.91723 0.68632 0.78086 0.89085 0.87913 0.72222 0.59894 0.90641 0.68783 0.84014 0.91865 0.82880 0.75527 0.78792 0.92601 0.87137 0.87723 0.841492 0.650747 0.72450 0.915664 0.74072 0.820309 0.90750 0.87023 0.90419 0.87548 0.93137 3 0.81165 0.78924 0.0222992 5 0.80892 0.78732 0.021605 0.042325 0.513113 weaklyHypermeth 1 1 insignificant 0.012127 0.541132 weaklyHypermeth 1 1 insignificant 0.049632 0.160865 lowCoverage 1 lowCoverage 0.81165 0.73267 0.081482 5 0.80892 0.72461 0.084315 4.8576e-04 0.99984 weaklyHypermeth 4.4160e-02 1 weaklyHypermeth 4.1516e-02 0.99675 weaklyHypermeth 1.0000e+00 1 insignificant 0.054777 2.8026e-01 lowCoverage 1.000000 lowCoverage 0.81165 0.84667 -0.043485 5 0.80892 0.85334 -0.044415 9.9663e-01 4.2218e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9604e-01 0.02607754 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.047872 1.1949e-02 lowCoverage 1.0000000 lowCoverage 0.78924 0.73267 0.06025 5 0.78732 0.72461 0.062710 2.2709e-02 0.99464 weaklyHypermeth 1.0000e+00 1 insignificant 2.9614e-01 0.87750 insignificant 1.0000e+00 1 insignificant 0.0051446 9.2601e-01 lowCoverage 1.0000000 lowCoverage 0.78924 0.84667 -0.065626 5 0.78732 0.85334 -0.066020 9.5237e-01 0.0028883 weaklyHypometh 1.0000e+00 1 insignificant 8.7890e-01 0.0035928 weaklyHypometh 1.00000000 1 insignificant -0.097505 0.010722 lowCoverage 1 lowCoverage 0.73267 0.84667 -0.12515 5 0.72461 0.85334 -0.12873 0.99999 8.4577e-05 weaklyHypometh 1 1.6915e-02 weaklyHypometh 0.9999 3.4145e-03 weaklyHypometh 1 5.6909e-01 insignificant -0.10265 0.06821640 lowCoverage 1.00000 lowCoverage chr14 51044337 51045337 126930 FRMD6 ENSG00000139926 0.85780 418 7 0.67245 220 8 0.45029 151 7 0.83668 183 6 0.62853 80 6 0.84564 412 7 0.75041 159 6 0.83715 216 7 0.77457 165 8 0.70996 157 6 0.68578 246 7 0.86448 63 5 0.90175 209 6 0.88636 48 3 0.70050 171 7 0.72660 73 3 0.62054 63 6 0.57111 286 6 0.73336 210 7 0.90195 287 7 0.80207 115 6 0.49623 102 6 0.89458 239 7 0.68290 79 4 0.87689 84 6 0.90032 305 7 0.79406 136 7 0.69310 53 3 0.70048 266 7 0.85936 316 7 0.83366 284 7 0.89118 397 7 0.10644 309 7 0.25389 276 7 0.39102 221 4 0.017105 117 6 0.21975 181 8 0.11993 423 7 0.58311 364 7 0.59012 406 7 0.71129 290 7 0.66423 343 7 0.43647 320 7 0.85184 0.68895 0.52074 0.84790 0.69307 0.87797 0.81072 0.80266 0.78055 0.85302 0.86926 0.87631 0.85770 0.81424 0.75747 0.82009 0.84655 0.53189 0.82164 0.86933 0.86138 0.57483 0.89042 0.71741 0.86057 0.88241 0.81600 0.88185 0.78748 0.84667 0.84948 0.84889 0.036006 0.068728 0.24326 0.044687 0.19908 0.027132 0.56914 0.59142 0.70441 0.68366 0.37706 4 0.80162 0.83628 -0.0355894 7 0.72031 0.76989 -0.049575 0.989482 0.081984 insignificant 1 1 insignificant 0.821693 0.104850 insignificant 1 1 insignificant -0.037607 0.406150 insignificant 1 insignificant 0.80162 0.13621 0.681302 7 0.72031 0.17590 0.544406 1.5387e-55 0.99999 hypermethylated 1.5387e-52 1 hypermethylated 6.4931e-17 1.00000 hypermethylated 6.4931e-14 1 hypermethylated 0.563106 1.7413e-05 hypermethylated 0.017413 hypermethylated 0.80279 0.62739 0.193406 7 0.75266 0.58528 0.167377 1.1365e-11 9.9993e-01 weaklyHypermeth 1.1365e-08 1.000000 weaklyHypermeth 3.1817e-08 0.99993566 weaklyHypermeth 3.1817e-05 1.00000 weaklyHypermeth 0.150749 2.6891e-02 weaklyHypermeth 1.0000000 insignificant 0.83628 0.13621 0.71948 7 0.76989 0.17590 0.593981 1.6064e-53 1.00000 hypermethylated 1.6064e-50 1 hypermethylated 5.2612e-13 1.00000 hypermethylated 5.2612e-10 1 hypermethylated 0.6007123 4.6685e-06 hypermethylated 0.0046685 hypermethylated 0.83685 0.62739 0.232910 7 0.80362 0.58528 0.218342 8.3893e-15 0.9999978 hypermethylated 8.3893e-12 1 hypermethylated 1.1930e-07 0.9999966 hypermethylated 0.00011930 1 hypermethylated 0.188356 0.010751 weaklyHypermeth 1 insignificant 0.13648 0.62739 -0.48500 7 0.19789 0.58528 -0.38739 1.00000 1.6741e-19 hypomethylated 1 1.6741e-16 hypomethylated 1.0000 1.1593e-08 hypomethylated 1 1.1593e-05 hypomethylated -0.41236 0.00026508 hypomethylated 0.26508 insignificant chr14 53879833 53880833 127154 ENSG00000219778 0.91057 211 5 0.589628 91 5 0.271429 36 5 0.922032 189 5 0.941818 39 3 0.95814 162 5 0.76667 24 3 0.866814 81 5 0.798788 54 5 0.971667 95 5 0.887979 151 5 0.633333 13 0 0.936886 157 5 0.831429 68 5 0.836975 65 5 0.750000 4 0 1.00000 2 0 0.445296 247 5 0.887619 87 5 0.958269 127 5 0.687500 44 5 0.377922 94 5 0.828788 51 5 0.87333 46 5 0.868421 98 5 0.920958 147 5 0.871841 92 5 0.925000 35 5 0.903505 107 5 0.906850 170 5 0.945093 141 5 0.950155 143 5 0.765558 73 5 0.810294 71 5 0.666667 101 3 0.50000 2 0 0.986667 74 5 0.891861 168 5 0.41694 156 5 0.345052 134 5 0.598551 103 5 0.246716 121 5 0.482543 112 5 0.92326 0.683345 0.320742 0.91785 0.921941 0.96946 0.86218 0.842642 0.792249 0.97957 0.882620 0.756410 0.941504 0.859158 0.829994 0.819394 0.867471 0.42536 0.928182 0.96184 0.75841 0.409840 0.822625 0.84006 0.85116 0.926579 0.836674 0.902644 0.87711 0.884637 0.935872 0.93851 0.715998 0.725537 0.678595 0.70307022 0.98333 0.848841 0.428377 0.39442 0.63120 0.248906 0.538012 3 0.827115 0.863014 -0.03565788 5 0.689361 0.722116 -0.03275568 0.962073 0.2514378 insignificant 1 1 insignificant 0.661536 0.051763 insignificant 1 1 insignificant -0.0300139 0.63772 lowCoverage 1 lowCoverage 0.827550 0.81186 0.017029 5 0.827233 0.844825 -0.017592 1.8897e-01 0.040837 inconclusive 1.0000e+00 1 insignificant 7.1570e-01 0.044074 inconclusive 1.0000e+00 1 insignificant 0.0380923 6.5288e-01 lowCoverage 1.0000000 lowCoverage 0.827550 0.416933 0.4185624 5 0.827233 0.406275 0.4209579 2.0317e-15 1.0000000 hypermethylated 2.0317e-12 1 hypermethylated 1.3143e-08 1.0000000 hypermethylated 1.3143e-05 1 hypermethylated 0.3903065 5.5608e-04 lowCoverage 0.13902124 lowCoverage 0.863753 0.81186 0.044011 5 0.866540 0.844825 0.021715 2.2206e-01 0.30453 insignificant 1.0000e+00 1 insignificant 4.6683e-01 0.22492 insignificant 1.0000e+00 1 insignificant 0.068106 4.3742e-01 lowCoverage 1.00000000 lowCoverage 0.863753 0.416933 0.45491977 5 0.866540 0.406275 0.4602647 2.1843e-16 1.0000000 hypermethylated 2.1843e-13 1 hypermethylated 1.2209e-08 1.000000 hypermethylated 7.8968e-06 1 hypermethylated 0.4203204 3.4265e-04 hypermethylated 0.113204 insignificant 0.81186 0.41693 0.388880 5 0.844825 0.40627 0.438550 1.2502e-12 9.9378e-01 hypermethylated 1.2502e-09 1.0000e+00 hypermethylated 5.8023e-05 9.9893e-01 hypermethylated 0.058023 1.0000e+00 hypermethylated 0.3522142 4.0643e-03 lowCoverage 0.5080359 lowCoverage chr14 54190190 54191190 127167 SAMD4A ENSG00000020577 0.89643 204 6 0.819674 284 6 0.710630 99 6 0.952247 266 6 0.916667 24 1 0.85951 264 6 0.92361 47 5 0.891715 101 5 0.857497 52 4 0.684676 54 4 0.869955 267 6 0.773810 32 4 0.834921 71 5 0.944444 12 1 0.859259 37 3 0.891111 32 3 0.85455 39 3 0.609085 150 6 0.926144 94 6 0.837501 283 6 0.904762 15 2 0.500000 21 1 0.879485 57 3 0.92143 54 4 0.754545 26 4 0.815129 193 6 0.789397 89 4 0.759259 29 4 0.875131 81 6 0.846154 243 6 0.867594 192 6 0.903657 330 6 0.263339 102 3 0.370899 51 6 0.218750 227 6 0.06250 29 3 0.192096 100 6 0.059048 259 6 0.87537 270 6 0.789352 248 6 0.868911 325 6 0.730007 157 5 0.799906 289 6 0.88034 0.808427 0.705153 0.93490 0.914634 0.84798 0.90346 0.908957 0.863774 0.81283 0.866194 0.790070 0.825436 0.882459 0.835230 0.881432 0.851834 0.59052 0.922477 0.82993 0.79070 0.594095 0.821100 0.86992 0.77724 0.812201 0.799570 0.747290 0.88056 0.831527 0.865186 0.90303 0.103921 0.319590 0.160823 0.12784162 0.16136 0.042509 0.871010 0.77672 0.85897 0.721528 0.785459 0 0.845357 0.868322 -0.01679876 6 0.848442 0.863816 -0.01537457 0.902249 0.3977323 insignificant 1 1 insignificant 0.487246 0.851161 insignificant 1 1 insignificant 0.0276264 0.48470 lowCoverage 1 lowCoverage 0.845357 0.16927 0.701778 6 0.848442 0.160546 0.687896 5.9883e-54 1.000000 hypermethylated 5.9883e-51 1 hypermethylated 1.5329e-12 1.000000 hypermethylated 1.5329e-09 1 hypermethylated 0.6512329 7.1545e-06 lowCoverage 0.0023848 lowCoverage 0.845357 0.836307 0.0226127 6 0.848442 0.822942 0.0255001 2.5872e-01 0.8072474 insignificant 1.0000e+00 1 insignificant 5.6797e-02 0.9911272 insignificant 1.0000e+00 1 insignificant 0.0329622 3.5312e-01 lowCoverage 1.00000000 lowCoverage 0.868322 0.16927 0.690456 6 0.863816 0.160546 0.703270 2.4369e-39 1.00000 hypermethylated 2.4369e-36 1 hypermethylated 1.7533e-10 1.00000 hypermethylated 1.7533e-07 1 hypermethylated 0.623606 1.2763e-06 lowCoverage 0.00042544 lowCoverage 0.868322 0.836307 0.03201924 6 0.863816 0.822942 0.0408747 1.0653e-01 0.8931216 insignificant 1.0000e+00 1 insignificant 2.6075e-01 0.931328 insignificant 1.0000e+00 1 insignificant 0.0053358 9.0260e-01 lowCoverage 1.000000 lowCoverage 0.16927 0.83631 -0.659025 6 0.160546 0.82294 -0.662396 1.0000e+00 3.1978e-29 hypomethylated 1.0000e+00 3.1978e-26 hypomethylated 1.0000e+00 5.9668e-08 hypomethylated 1.000000 5.9668e-05 hypomethylated -0.6182707 5.8943e-06 hypomethylated 0.0058943 hypomethylated chr14 56304931 56305931 127289 C14orf101 ENSG00000070269 0.71356 153 9 0.789724 186 9 0.709615 83 8 0.743171 123 6 0.719216 115 9 0.62142 136 9 0.64074 146 9 0.742012 119 9 0.690889 101 9 0.720769 103 9 0.602782 205 9 0.565801 70 9 0.743526 116 9 0.650992 100 9 0.703199 107 9 0.761023 36 4 0.65273 805 6 0.660594 154 11 0.673950 87 9 0.757962 87 9 0.696970 34 2 0.687500 19 1 0.642593 103 9 0.65625 27 2 0.838272 78 5 0.805375 125 9 0.624762 65 5 0.535714 22 1 0.853518 111 9 0.854313 146 8 0.788706 156 9 0.616334 124 9 0.645833 151 9 0.784798 83 5 0.798232 138 9 0.50000 30 4 0.489525 116 5 0.633983 94 9 0.72856 179 9 0.658341 177 9 0.714346 187 9 0.600837 119 5 0.733492 157 9 0.72134 0.744585 0.705037 0.83627 0.753515 0.72788 0.69692 0.800803 0.669904 0.76394 0.776559 0.746369 0.740646 0.796859 0.794864 0.658055 0.778834 0.78431 0.763568 0.79714 0.80260 0.815700 0.785461 0.88209 0.78763 0.800878 0.783921 0.631810 0.91704 0.811781 0.798338 0.72499 0.778495 0.697029 0.791371 0.54817967 0.65802 0.790426 0.794586 0.75270 0.77184 0.718671 0.821068 1 0.739030 0.783168 -0.04383652 9 0.649416 0.671027 -0.02161154 0.921138 0.0030741 weaklyHypometh 1 1 insignificant 0.874720 0.038877 weaklyHypometh 1 1 insignificant -0.0235084 0.49584 insignificant 1 insignificant 0.739318 0.73813 0.013761 5 0.648089 0.546503 0.101585 9.2424e-03 0.702459 weaklyHypermeth 3.3009e-01 1 insignificant 1.1636e-01 0.957865 insignificant 1.0000e+00 1 insignificant 0.0511218 3.9738e-01 insignificant 1.0000000 insignificant 0.739332 0.766789 -0.0187474 9 0.651294 0.661573 -0.0102788 5.2303e-01 0.1081516 insignificant 1.0000e+00 1 insignificant 3.9383e-01 0.1684314 insignificant 1.0000e+00 1 insignificant 0.0060692 8.3834e-01 insignificant 1.00000000 insignificant 0.784646 0.73813 0.049724 5 0.678689 0.546503 0.132185 3.9654e-03 0.98521 weaklyHypermeth 1.4687e-01 1 insignificant 1.7385e-02 0.99703 weaklyHypermeth 6.8779e-01 1 insignificant 0.074630 2.6508e-01 insignificant 1.00000000 insignificant 0.783515 0.766789 0.01886950 9 0.671363 0.661573 0.0097901 5.7733e-01 0.9491588 insignificant 1.0000e+00 1 insignificant 5.0950e-01 0.864188 insignificant 1.0000e+00 1 insignificant 0.0295776 4.7308e-01 insignificant 1.000000 insignificant 0.73970 0.76838 -0.040514 5 0.550379 0.68893 -0.138547 8.3032e-01 5.9764e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5184e-01 1.0851e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0450526 4.7642e-01 insignificant 1.0000000 insignificant chr14 56602539 56603539 127361 ENSG00000213618 0.10667 41 4 0.049524 133 5 0.083484 192 5 0.100000 18 0 0.085250 148 5 0.13333 48 4 0.18591 191 5 0.043987 155 5 0.078296 123 5 0.092605 152 5 0.074287 196 5 0.084179 193 5 0.031247 210 5 NA 0 0 0.077378 195 5 0.140656 226 5 0.08137 112 5 0.000000 20 0 0.099537 126 5 0.000000 42 5 0.126364 52 5 0.000000 13 0 0.056407 117 5 0.13214 36 5 0.133333 15 0 0.060636 211 5 0.037162 87 5 0.073333 31 5 0.090619 117 5 0.036912 203 5 0.046694 174 5 0.094872 59 5 0.062808 126 5 0.030311 112 5 0.088889 80 5 0.20000 10 0 0.025000 39 5 0.309524 64 5 0.00000 41 5 0.000000 43 4 0.000000 4 0 0.000000 8 0 0.000000 6 0 0.11733 0.054476 0.083833 0.11000 0.093775 0.12167 0.19273 0.043386 0.077034 0.10187 0.081715 0.087835 0.034372 NA 0.085116 0.138055 0.075221 0.00000 0.103241 0.00000 0.11900 0.000000 0.062048 0.14536 0.14667 0.062154 0.033735 0.064000 0.09968 0.040603 0.051363 0.10436 0.069089 0.026200 0.097778 0.22000000 0.02750 0.340476 0.000000 0.00000 0.00000 0.000000 0.000000 0 0.090440 0.065471 0.02378892 5 0.086741 0.063333 0.02340749 0.006757 0.9954202 weaklyHypermeth 1 1 insignificant 0.050946 0.933023 insignificant 1 1 insignificant 0.0074187 0.64806 lowCoverage 1 lowCoverage 0.090440 0.10673 -0.015641 5 0.086741 0.097557 -0.010816 4.3708e-01 0.359653 insignificant 1.0000e+00 1 insignificant 5.3501e-02 0.716937 insignificant 1.0000e+00 1 insignificant -0.0379638 4.5454e-01 lowCoverage 1.0000000 lowCoverage 0.090440 0.000000 0.0915551 0 0.086741 0.000000 0.0867409 3.5865e-08 0.9999989 noCoverage 8.9662e-06 1 noCoverage 1.6909e-06 0.9999996 noCoverage 3.3817e-04 1 noCoverage 0.0814582 3.2234e-07 lowCoverage 0.00032234 lowCoverage 0.065471 0.10673 -0.039270 5 0.063333 0.097557 -0.034224 8.8000e-01 0.15129 insignificant 1.0000e+00 1 insignificant 1.4384e-01 0.40833 insignificant 1.0000e+00 1 insignificant -0.045382 3.7941e-01 lowCoverage 1.00000000 lowCoverage 0.065471 0.000000 0.06748569 0 0.063333 0.000000 0.0633334 1.0559e-05 0.9999696 noCoverage 1.7598e-03 1 noCoverage 4.5567e-05 0.999983 noCoverage 7.5946e-03 1 noCoverage 0.0740395 8.3606e-05 lowCoverage 0.083606 lowCoverage 0.10673 0.00000 0.108959 0 0.097557 0.00000 0.097557 1.3371e-02 9.9934e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 3.8856e-03 9.9995e-01 noCoverage 0.647607 1.0000e+00 noCoverage 0.1194220 4.8650e-02 lowCoverage 1.0000000 lowCoverage chr14 58077924 58078924 127436 KIAA0586 ENSG00000100578 0.89605 113 5 0.731272 92 5 0.650000 26 3 0.720933 116 5 0.512963 44 5 0.77282 90 5 0.59707 45 5 0.811232 88 5 0.851429 28 5 0.659524 26 3 0.563553 130 5 0.916667 12 0 0.661667 35 5 0.933333 10 0 0.800000 15 3 0.375000 8 0 NA 0 0 0.601290 145 4 0.684416 43 5 0.691468 56 5 0.773810 21 1 1.000000 6 0 0.738971 36 2 0.61905 38 5 0.859964 65 2 0.489135 107 5 0.601058 54 5 0.750000 12 1 0.744444 51 2 0.756481 97 5 0.802331 79 5 0.680672 67 5 0.670332 71 5 0.394558 47 5 0.617420 104 5 1.00000 3 0 0.666952 62 5 0.734074 101 5 0.66584 118 5 0.751389 101 5 0.727792 107 5 0.699285 100 5 0.749802 114 5 0.84772 0.801576 0.654762 0.78835 0.689418 0.80688 0.68219 0.827019 0.896599 0.68878 0.819017 0.795343 0.725794 0.984127 0.778676 0.495887 NA 0.82430 0.718924 0.75562 0.69444 0.955590 0.828256 0.73016 0.84994 0.782093 0.836130 0.788924 0.73651 0.734656 0.790010 0.87395 0.658469 0.639456 0.713212 0.94604954 0.70460 0.714462 0.771415 0.86078 0.77500 0.806756 0.875950 0 0.749554 0.742496 0.01237566 5 0.633423 0.671583 -0.03816024 0.565703 0.6495037 insignificant 1 1 insignificant 0.890915 0.327196 insignificant 1 1 insignificant -0.0277815 0.58488 lowCoverage 1 lowCoverage 0.750673 0.66925 0.083588 5 0.642279 0.570789 0.071490 1.3185e-03 0.983196 weaklyHypermeth 5.7325e-02 1 weaklyHypermeth 9.3074e-02 0.991032 insignificant 1.0000e+00 1 insignificant 0.0263221 7.6974e-01 lowCoverage 1.0000000 lowCoverage 0.754991 0.772222 0.0054664 5 0.744191 0.720290 0.0239011 3.4585e-01 0.5420045 insignificant 1.0000e+00 1 insignificant 2.3925e-01 0.3614993 insignificant 1.0000e+00 1 insignificant -0.0119425 7.4958e-01 lowCoverage 1.00000000 lowCoverage 0.742857 0.66925 0.071827 5 0.672286 0.570789 0.101496 1.7556e-03 0.94556 weaklyHypermeth 7.3151e-02 1 weaklyHypermeth 2.8218e-02 0.99622 weaklyHypermeth 1.0000e+00 1 insignificant 0.054104 5.5836e-01 lowCoverage 1.00000000 lowCoverage 0.745572 0.772222 -0.00760978 5 0.721200 0.720290 0.0009099 6.4688e-01 0.6067506 insignificant 1.0000e+00 1 insignificant 3.6897e-01 0.862364 insignificant 1.0000e+00 1 insignificant 0.0158389 7.0532e-01 lowCoverage 1.000000 lowCoverage 0.67454 0.77222 -0.074869 5 0.665772 0.72029 -0.054518 7.3039e-01 7.4208e-04 weaklyHypometh 1.0000e+00 6.1840e-02 weaklyHypometh 8.1206e-01 4.8198e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -0.0382646 6.5674e-01 lowCoverage 1.0000000 lowCoverage chr14 58682696 58683696 127493 ENSG00000214813 0.59410 111 5 0.639474 100 3 0.586667 47 5 0.512647 53 5 0.487879 52 5 0.45865 171 5 0.54487 94 5 0.560606 40 5 0.525595 56 5 0.580952 23 3 0.642127 125 5 0.806111 34 5 0.593434 48 5 0.485410 54 5 0.677549 56 3 0.850000 20 0 0.56139 252 4 0.621023 71 5 0.565556 47 3 0.508816 83 5 0.554286 23 3 0.592593 23 3 0.673939 48 4 0.51461 39 4 0.685924 46 3 0.682799 115 5 0.692063 37 4 0.618981 39 5 0.605655 54 5 0.630745 93 5 0.612336 73 4 0.524596 96 5 0.428788 82 5 0.564646 62 5 0.367763 127 5 0.69455 37 5 0.506738 63 5 0.568941 93 5 0.57017 150 5 0.626780 145 5 0.563817 88 5 0.400000 40 3 0.656075 98 5 0.57936 0.580481 0.604817 0.50982 0.425938 0.52157 0.52306 0.574062 0.555257 0.52980 0.629243 0.795085 0.594194 0.579672 0.605255 0.805944 0.461632 0.67749 0.554312 0.50953 0.50882 0.599591 0.662693 0.54255 0.61656 0.683265 0.675103 0.754157 0.51848 0.633451 0.624776 0.54115 0.473829 0.539742 0.387790 0.62555626 0.50966 0.561094 0.566413 0.60819 0.57707 0.392920 0.626600 3 0.562785 0.628280 -0.06498731 5 0.550883 0.579901 -0.02901816 0.944339 0.0503218 insignificant 1 1 insignificant 0.917249 0.272009 insignificant 1 1 insignificant -0.0255676 0.37655 lowCoverage 1 lowCoverage 0.563399 0.50647 0.058863 5 0.575345 0.497881 0.077464 9.6543e-05 0.766293 weaklyHypermeth 5.3635e-03 1 weaklyHypermeth 1.5852e-02 0.838389 weaklyHypermeth 7.2053e-01 1 insignificant 0.0682395 2.2931e-01 lowCoverage 1.0000000 lowCoverage 0.563399 0.591171 -0.0189416 5 0.575345 0.584713 -0.0093684 5.0455e-01 0.3692445 insignificant 1.0000e+00 1 insignificant 3.5806e-01 0.2750590 insignificant 1.0000e+00 1 insignificant 0.0267740 6.0835e-01 lowCoverage 1.00000000 lowCoverage 0.629575 0.50647 0.126383 5 0.629214 0.497881 0.131333 1.0757e-04 0.99878 weaklyHypermeth 5.9764e-03 1 weaklyHypermeth 1.0851e-02 0.99560 weaklyHypermeth 4.7179e-01 1 insignificant 0.093807 1.0809e-01 lowCoverage 1.00000000 lowCoverage 0.629575 0.591171 0.04760259 5 0.629214 0.584713 0.0445010 1.9913e-01 0.9202814 insignificant 1.0000e+00 1 insignificant 1.5382e-01 0.840288 insignificant 1.0000e+00 1 insignificant 0.0523416 3.2037e-01 lowCoverage 1.000000 lowCoverage 0.50647 0.59117 -0.079252 5 0.497881 0.58471 -0.086832 9.8485e-01 2.7474e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5141e-01 1.8111e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0414654 5.3753e-01 lowCoverage 1.0000000 lowCoverage chr14 61430502 61431502 127672 ENSG00000213572 0.91404 163 4 0.785211 145 5 0.798051 85 4 0.974747 57 3 0.935714 43 4 0.86914 149 4 0.83801 70 5 0.930140 93 5 0.828394 65 4 0.857089 66 5 0.905528 173 5 0.730058 47 5 0.931378 116 5 NA 0 0 0.907434 111 5 0.985714 32 3 0.71111 61 4 0.874000 55 3 0.887360 99 5 0.804057 173 4 0.811429 42 3 0.905229 30 3 0.936520 72 4 0.84088 65 4 0.975000 29 3 0.880288 149 5 0.873548 63 4 0.786172 70 4 0.848263 87 5 0.901288 162 5 0.958224 120 5 0.882896 166 4 0.799323 95 5 0.701349 94 5 0.916667 32 3 0.65000 22 3 0.847037 66 4 0.755515 147 5 0.80572 123 3 0.910317 108 4 0.990385 66 3 0.945144 97 3 0.971261 117 4 0.90461 0.734068 0.879864 0.97250 0.905203 0.86324 0.87853 0.968980 0.930765 0.84377 0.904261 0.791683 0.926772 NA 0.899280 0.970899 0.803645 0.86926 0.857827 0.88955 0.79471 0.906919 0.936962 0.87567 0.96667 0.891849 0.903554 0.842559 0.83426 0.892768 0.976669 0.88791 0.769910 0.674686 0.860031 0.64767639 0.79815 0.770837 0.944211 0.91343 0.98433 0.932916 0.950466 3 0.871880 0.881517 -0.01130780 4 0.874101 0.886293 -0.01219223 0.850582 0.2473143 lowCoverage 1 1 lowCoverage 0.900109 0.255043 lowCoverage 1 1 lowCoverage -0.0166183 0.49429 lowCoverage 1 lowCoverage 0.871880 0.77412 0.094581 4 0.874101 0.768520 0.105581 3.7676e-06 0.984560 lowCoverage 2.3547e-04 1 lowCoverage 4.1243e-04 0.974021 lowCoverage 4.1243e-02 1 lowCoverage 0.0883779 8.0607e-02 lowCoverage 1.0000000 lowCoverage 0.871880 0.943249 -0.0626334 3 0.874101 0.938028 -0.0639271 9.9740e-01 0.0023323 lowCoverage 1.0000e+00 1 lowCoverage 9.9967e-01 0.0018523 lowCoverage 1.0000e+00 1 lowCoverage -0.0578730 1.6507e-01 lowCoverage 1.00000000 lowCoverage 0.881517 0.77412 0.106054 5 0.886293 0.768520 0.117773 9.2536e-07 0.93832 weaklyHypermeth 6.6097e-05 1 weaklyHypermeth 2.4009e-04 0.95538 weaklyHypermeth 3.4393e-02 1 weaklyHypermeth 0.104996 4.5540e-02 lowCoverage 1.00000000 lowCoverage 0.881517 0.943249 -0.05080491 3 0.886293 0.938028 -0.0517348 9.9844e-01 0.0031306 lowCoverage 1.0000e+00 1 lowCoverage 9.9962e-01 0.007989 lowCoverage 1.0000e+00 1 lowCoverage -0.0412546 3.0047e-01 lowCoverage 1.000000 lowCoverage 0.77412 0.94325 -0.182741 3 0.768520 0.93803 -0.169508 9.9965e-01 3.4216e-05 lowCoverage 1.0000e+00 4.2770e-03 lowCoverage 1.0000e+00 2.2917e-04 lowCoverage 1.000000 3.8195e-02 lowCoverage -0.1462509 1.9279e-02 lowCoverage 1.0000000 lowCoverage chr14 62760550 62761550 127748 RHOJ ENSG00000126785 0.57059 132 5 0.832818 158 6 0.872121 33 5 0.734572 131 5 0.812576 66 5 0.78354 132 5 0.72698 44 6 0.826833 79 6 0.720370 46 6 0.638095 36 5 0.860324 204 6 0.891667 39 3 0.711905 72 6 0.811111 17 3 0.768350 46 4 0.781944 36 5 0.75595 20 3 0.716340 191 5 0.795139 76 6 0.680461 106 6 0.798095 28 3 0.820370 53 3 0.736276 83 6 0.84722 18 1 0.736626 66 5 0.735518 159 6 0.618661 39 4 0.836111 32 4 0.807372 137 6 0.803152 174 6 0.817966 171 6 0.806433 138 6 0.618671 128 6 0.576058 58 5 0.626626 110 6 0.54444 29 3 0.777376 54 4 0.741096 175 6 0.80737 121 5 0.776301 127 5 0.790297 132 5 0.853766 66 5 0.806959 92 5 0.74515 0.837137 0.846387 0.77995 0.828825 0.77692 0.73407 0.807363 0.739744 0.66429 0.854889 0.878846 0.737363 0.810607 0.741647 0.790385 0.721363 0.78061 0.806090 0.71490 0.85934 0.791880 0.766407 0.80769 0.71733 0.747883 0.660158 0.838462 0.80174 0.823827 0.841205 0.80207 0.610486 0.594322 0.660437 0.52179487 0.80696 0.753240 0.807984 0.84637 0.80505 0.881419 0.847403 2 0.777644 0.798725 -0.01658366 5 0.768619 0.787313 -0.01869425 0.936299 0.2598663 insignificant 1 1 insignificant 0.848738 0.487898 insignificant 1 1 insignificant -0.0157325 0.54530 lowCoverage 1 lowCoverage 0.777644 0.66968 0.112648 5 0.768619 0.653883 0.114736 1.2850e-07 0.994280 weaklyHypermeth 1.0708e-05 1 weaklyHypermeth 1.3610e-05 0.990597 weaklyHypermeth 2.7221e-03 1 weaklyHypermeth 0.1172062 2.4702e-02 weaklyHypermeth 1.0000000 insignificant 0.777644 0.814126 -0.0508601 5 0.768619 0.821401 -0.0527825 9.9055e-01 0.0237836 weaklyHypometh 1.0000e+00 1 insignificant 9.7067e-01 0.0567626 insignificant 1.0000e+00 1 insignificant -0.0423531 7.1030e-02 insignificant 1.00000000 insignificant 0.798725 0.66968 0.125620 6 0.787313 0.653883 0.133430 8.3088e-09 0.99736 weaklyHypermeth 1.0617e-06 1 weaklyHypermeth 9.5622e-06 0.99784 weaklyHypermeth 1.9124e-03 1 weaklyHypermeth 0.132939 1.4420e-02 lowCoverage 1.00000000 lowCoverage 0.798725 0.814126 -0.03129817 5 0.787313 0.821401 -0.0340883 9.3888e-01 0.0573295 insignificant 1.0000e+00 1 insignificant 9.0064e-01 0.073252 insignificant 1.0000e+00 1 insignificant -0.0266206 2.5736e-01 lowCoverage 1.000000 lowCoverage 0.66968 0.81413 -0.161619 5 0.653883 0.82140 -0.167518 9.8954e-01 2.4077e-07 weaklyHypometh 1.0000e+00 6.0193e-05 weaklyHypometh 9.9902e-01 1.1116e-05 weaklyHypometh 1.000000 3.7053e-03 weaklyHypometh -0.1595592 6.7422e-03 weaklyHypometh 0.6742194 insignificant chr14 64414869 64415869 127802 SPTB ENSG00000070182 0.11130 177 7 0.023987 336 7 0.038658 236 7 0.085735 157 7 0.023008 190 7 0.20897 329 7 0.06200 208 7 0.043537 344 7 0.031566 268 7 0.077421 226 7 0.064803 182 7 0.033862 156 6 0.059801 142 6 0.021978 115 6 0.024569 275 7 0.005291 126 7 0.04137 56 4 0.051278 206 7 0.059028 207 4 0.060358 264 7 0.070446 71 5 0.036315 190 7 0.130107 155 7 0.06520 115 6 0.060795 136 7 0.053419 407 7 0.030245 268 7 0.094077 123 6 0.031197 138 5 0.025748 555 7 0.053123 377 7 0.067639 299 7 0.025402 160 6 0.014286 87 6 0.163265 184 6 0.00000 27 3 0.064867 215 7 0.017339 328 7 0.15723 255 7 0.047577 174 4 0.052023 138 4 0.029918 120 4 0.057681 160 5 0.17114 0.063656 0.083006 0.15883 0.064700 0.20390 0.12952 0.117432 0.076352 0.13903 0.123888 0.074761 0.116498 0.056182 0.056038 0.011073 0.101647 0.12660 0.098988 0.11391 0.10241 0.060446 0.191359 0.18469 0.15717 0.112484 0.060986 0.060715 0.08832 0.081420 0.102024 0.17954 0.056345 0.036426 0.116838 0.00070964 0.12254 0.023704 0.093132 0.13650 0.12165 0.063869 0.091503 3 0.079286 0.074806 0.00096848 7 0.064254 0.059500 0.00475343 0.906929 0.7482063 insignificant 1 1 insignificant 0.979855 0.569371 insignificant 1 1 insignificant -0.0034330 0.79448 insignificant 1 insignificant 0.079361 0.03996 0.050319 7 0.070679 0.025574 0.045105 1.6067e-01 0.920196 insignificant 1.0000e+00 1 insignificant 2.0675e-01 0.994266 insignificant 1.0000e+00 1 insignificant 0.0088997 7.4894e-01 insignificant 1.0000000 insignificant 0.079142 0.075561 0.0015267 5 0.041495 0.094439 -0.0529434 3.5052e-01 0.7320634 insignificant 1.0000e+00 1 insignificant 3.0328e-01 0.8893119 insignificant 1.0000e+00 1 insignificant -0.0124585 6.3192e-01 lowCoverage 1.00000000 lowCoverage 0.074912 0.03996 0.047176 7 0.065450 0.025574 0.039876 1.4693e-01 0.97361 insignificant 1.0000e+00 1 insignificant 9.3299e-02 0.99657 insignificant 1.0000e+00 1 insignificant 0.012333 6.5460e-01 insignificant 1.00000000 insignificant 0.074495 0.075561 -0.00073406 5 0.042961 0.094439 -0.0514781 4.0035e-01 0.7149666 insignificant 1.0000e+00 1 insignificant 8.9075e-02 0.951597 insignificant 1.0000e+00 1 insignificant -0.0090255 7.2342e-01 lowCoverage 1.000000 lowCoverage 0.04008 0.07565 -0.056819 5 0.031968 0.10624 -0.074276 3.9289e-01 1.9877e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2166e-01 3.5131e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0213582 5.4007e-01 lowCoverage 1.0000000 lowCoverage chr14 64921369 64922369 127822 ENSG00000213511 0.69200 92 5 0.636508 89 5 0.433333 30 5 0.585714 79 5 0.676339 42 5 0.65556 60 5 0.66071 60 5 0.673449 56 5 0.744792 43 5 0.676020 39 5 0.773365 123 6 0.625000 24 2 0.583333 31 2 0.727588 62 6 0.672727 46 5 0.733333 18 2 NA 0 0 0.597619 59 2 0.801948 36 2 0.780833 43 2 0.812500 18 2 0.833333 6 0 0.602564 61 5 0.83916 30 2 0.845238 57 5 0.680616 72 5 0.866667 16 0 0.450000 12 2 0.715414 57 2 0.685511 71 5 0.736111 73 5 0.765568 46 5 0.669164 88 5 0.805195 51 5 0.551751 81 5 0.46667 9 0 0.673660 37 2 0.704396 68 5 0.55797 51 2 0.776680 80 5 0.621905 72 5 0.620000 22 2 0.654524 66 5 0.66243 0.543032 0.470588 0.59769 0.650210 0.69608 0.51103 0.746019 0.711397 0.74343 0.661929 0.725490 0.666667 0.739899 0.677807 0.649510 NA 0.65616 0.699866 0.73683 0.67130 0.687333 0.545249 0.70434 0.81127 0.712267 0.848039 0.505862 0.63526 0.704690 0.627451 0.68881 0.691382 0.600267 0.466768 0.57843137 0.55954 0.670006 0.583760 0.73599 0.65336 0.720588 0.649667 0 0.663760 0.684008 -0.01167910 5 0.730338 0.656814 0.07352452 0.959165 0.3953501 insignificant 1 1 insignificant 0.834640 0.167420 insignificant 1 1 insignificant -0.0660480 0.11740 lowCoverage 1 lowCoverage 0.662451 0.66467 0.017688 5 0.696630 0.713300 -0.016670 2.4898e-01 0.391621 insignificant 1.0000e+00 1 insignificant 4.3852e-01 0.759503 insignificant 1.0000e+00 1 insignificant 0.0248703 6.5086e-01 lowCoverage 1.0000000 lowCoverage 0.661793 0.676976 -0.0149611 5 0.653292 0.704784 -0.0514923 7.0312e-01 0.3124204 insignificant 1.0000e+00 1 insignificant 7.6011e-01 0.4996557 insignificant 1.0000e+00 1 insignificant 0.0237930 5.8271e-01 lowCoverage 1.00000000 lowCoverage 0.685328 0.66467 0.031047 5 0.738915 0.713300 0.025615 4.1075e-01 0.92859 insignificant 1.0000e+00 1 insignificant 1.5480e-01 0.99742 insignificant 1.0000e+00 1 insignificant 0.090918 1.5954e-01 lowCoverage 1.00000000 lowCoverage 0.684720 0.676976 -0.00257099 5 0.701617 0.704784 -0.0031666 4.5287e-01 0.6109125 insignificant 1.0000e+00 1 insignificant 2.5100e-01 0.775296 insignificant 1.0000e+00 1 insignificant 0.0898410 1.0082e-01 lowCoverage 1.000000 lowCoverage 0.66366 0.67698 -0.038955 5 0.672343 0.70478 -0.032441 7.1747e-01 4.2724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3680e-01 3.5474e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0010773 9.8623e-01 lowCoverage 1.0000000 lowCoverage chr14 65880444 65881444 127888 ENSG00000200860 0.90778 384 13 0.867543 127 10 0.755828 118 10 0.895445 362 13 0.954167 41 5 0.76226 375 13 0.80049 88 5 0.976496 88 7 0.850477 70 8 0.802761 83 8 0.852761 227 10 0.621667 32 2 0.828853 128 7 NA 0 0 0.965476 67 6 0.927273 39 6 0.89514 58 6 0.917905 296 13 0.915895 123 12 0.895520 246 13 1.000000 46 4 0.761538 127 10 0.913919 191 13 0.90238 41 2 0.928846 83 7 0.865163 207 12 0.976923 61 7 0.785027 37 4 0.822436 106 9 0.882685 232 12 0.879957 181 12 0.869429 386 13 0.833929 120 10 0.779241 144 11 0.741400 296 13 0.87086 73 11 0.921926 56 4 0.903360 192 12 0.91297 314 13 0.936745 398 13 0.891596 407 13 0.916340 322 13 0.914873 365 13 0.89181 0.844482 0.800061 0.91115 0.924217 0.87705 0.88311 0.962342 0.917412 0.87919 0.946869 0.915278 0.909539 NA 0.949025 0.916779 0.918643 0.94363 0.923978 0.92788 1.00000 0.760738 0.923277 0.90596 0.94863 0.932771 0.948993 0.841670 0.90701 0.921201 0.951995 0.88511 0.807766 0.846028 0.833828 0.91177547 0.89635 0.929374 0.935631 0.91514 0.90017 0.938257 0.904890 2 0.896306 0.882214 0.00986730 11 0.880726 0.881209 -0.00048274 0.322478 0.8402476 insignificant 1 1 insignificant 0.588990 0.219133 insignificant 1 1 insignificant -0.0195299 0.49823 insignificant 1 insignificant 0.896435 0.84336 0.048298 13 0.884111 0.825414 0.058697 6.5776e-07 0.832921 weaklyHypermeth 5.0597e-05 1 weaklyHypermeth 2.6403e-03 0.934989 weaklyHypermeth 2.0310e-01 1 insignificant 0.0210422 5.6215e-01 insignificant 1.0000000 insignificant 0.896306 0.921927 -0.0168895 12 0.880726 0.919267 -0.0385408 9.7611e-01 0.0746880 insignificant 1.0000e+00 1 insignificant 3.2584e-01 0.5695374 insignificant 1.0000e+00 1 insignificant -0.0516755 2.3396e-02 weaklyHypometh 1.00000000 insignificant 0.882145 0.84336 0.041948 11 0.872724 0.825414 0.047310 7.8074e-04 0.74082 weaklyHypermeth 3.7178e-02 1 weaklyHypermeth 2.0974e-03 0.94254 weaklyHypermeth 1.4982e-01 1 insignificant 0.040572 2.7771e-01 insignificant 1.00000000 insignificant 0.882214 0.921927 -0.02804885 11 0.881209 0.919267 -0.0380581 9.9613e-01 0.0198531 weaklyHypometh 1.0000e+00 1 insignificant 5.7347e-01 0.745016 insignificant 1.0000e+00 1 insignificant -0.0321456 1.5886e-01 insignificant 1.000000 insignificant 0.84336 0.92188 -0.056675 12 0.825414 0.91350 -0.088086 9.7948e-01 5.7533e-05 weaklyHypometh 1.0000e+00 5.7533e-03 weaklyHypometh 8.8117e-01 7.9888e-03 weaklyHypometh 1.000000 7.6151e-01 insignificant -0.0727177 5.3342e-02 insignificant 1.0000000 insignificant chr14 67058365 67059365 127955 TMEM229B ENSG00000198133 0.82955 295 9 0.718128 273 9 0.782319 115 6 0.826135 191 9 0.810185 81 9 0.73556 384 9 0.71245 135 9 0.836788 194 9 0.761425 105 7 0.733064 94 9 0.781346 376 9 0.737921 67 4 0.853254 154 7 0.875000 39 2 0.878776 149 9 0.744042 72 4 0.80970 43 4 0.481797 116 7 0.825227 170 7 0.813446 275 9 0.767500 91 7 0.802596 90 7 0.792456 190 9 0.88085 127 5 0.717172 62 4 0.848904 284 9 0.740460 171 7 0.658136 94 5 0.807826 138 7 0.869640 306 9 0.792350 243 9 0.728930 406 9 0.594793 212 9 0.446874 139 9 0.570298 152 7 0.81349 64 4 0.465201 185 9 0.585036 256 9 0.83060 221 9 0.811160 199 9 0.751236 187 9 0.745823 183 7 0.775369 207 9 0.85990 0.772419 0.815236 0.85925 0.850876 0.75573 0.77343 0.879828 0.820685 0.87223 0.810135 0.893867 0.870472 0.883807 0.871595 0.811035 0.813167 0.73950 0.843527 0.84845 0.78620 0.819203 0.840036 0.84376 0.85433 0.899189 0.761845 0.838545 0.84258 0.911456 0.834801 0.84611 0.680155 0.509436 0.559575 0.87685439 0.64846 0.784456 0.866014 0.84274 0.81477 0.888702 0.864931 4 0.812200 0.826521 -0.01263597 9 0.709963 0.791187 -0.08122398 0.940426 0.1859417 insignificant 1 1 insignificant 0.702075 0.111008 insignificant 1 1 insignificant -0.0065962 0.80923 insignificant 1 insignificant 0.812200 0.63393 0.170502 9 0.709963 0.527835 0.182128 1.1771e-10 0.999999 weaklyHypermeth 1.9618e-08 1 weaklyHypermeth 9.8796e-06 1.000000 weaklyHypermeth 2.4699e-03 1 weaklyHypermeth 0.1980235 1.1909e-02 weaklyHypermeth 1.0000000 insignificant 0.812444 0.838516 -0.0155684 9 0.780960 0.808767 -0.0278067 7.1995e-01 0.0668428 insignificant 1.0000e+00 1 insignificant 6.6430e-01 0.0566205 insignificant 1.0000e+00 1 insignificant -0.0055321 8.3074e-01 insignificant 1.00000000 insignificant 0.826521 0.63393 0.186590 9 0.791187 0.527835 0.263352 8.4934e-09 1.00000 weaklyHypermeth 1.0617e-06 1 weaklyHypermeth 2.6371e-06 1.00000 weaklyHypermeth 8.7903e-04 1 weaklyHypermeth 0.204620 1.0388e-02 weaklyHypermeth 0.94437791 insignificant 0.826443 0.838516 0.00385076 9 0.770306 0.808767 -0.0384604 6.0525e-01 0.4268579 insignificant 1.0000e+00 1 insignificant 5.2677e-01 0.574074 insignificant 1.0000e+00 1 insignificant 0.0010641 9.6696e-01 insignificant 1.000000 insignificant 0.63519 0.83852 -0.166389 9 0.580619 0.80877 -0.228148 1.0000e+00 3.9433e-05 weaklyHypometh 1.0000e+00 4.3815e-03 weaklyHypometh 1.0000e+00 1.0809e-04 weaklyHypometh 1.000000 2.7022e-02 weaklyHypometh -0.2035556 1.1074e-02 weaklyHypometh 0.9228722 insignificant chr14 67851235 67852235 128041 ENSG00000210054 0.76704 171 5 0.6754579 52 5 0.687470 105 5 0.7773292 84 5 0.785714 24 2 0.761703 168 5 0.727484 67 5 0.7077273 73 5 0.7053159 75 5 0.77703 84 5 0.749571 98 5 0.764444 34 5 0.6987115 88 5 NA 0 0 0.7941991 64 5 0.7377778 43 5 0.727545 60 5 0.802988 80 5 0.819993 74 5 0.771884 136 5 0.700000 25 3 0.843889 43 5 0.754937 102 5 0.90000 26 2 0.890000 32 3 0.735104 103 5 0.86364 26 2 0.94000 36 5 0.67206 36 5 0.7507815 98 5 0.779419 80 5 0.7159271 162 5 0.6702503 58 4 0.5209503 69 5 0.72617 86 5 0.791667 30 3 0.874242 30 2 0.738830 90 5 0.874444 149 5 0.8125108 182 5 0.753763 103 5 0.8755441 183 5 0.7731900 111 5 0.772861 0.680653 0.6983794 0.786815 0.7974026 0.775442 0.745171 0.7120661 0.7297495 0.79078 0.770605 0.753535 0.7095747 NA 0.8122511 0.7247475 0.737944 0.8127918 0.821233 0.785415 0.721818 0.847677 0.767924 0.90000 0.895455 0.7496013 0.8636364 0.94000 0.69085 0.7777423 0.7954794 0.7478767 0.6720685 0.5352844 0.731094 0.797348 0.874242 0.7581685 0.8845960 0.822117 0.766549 0.8801512 0.7931201 0 0.758228 0.772432 -0.00992557 5 0.753835 0.759543 -0.0057075 0.748837 0.12159477 insignificant 1 1.00000 insignificant 0.979425 0.02225095 weaklyHypometh 1 1.00000 insignificant -0.0460381 0.1127160 lowCoverage 1.0000 lowCoverage 0.758228 0.7052342 0.0603448 5 0.753835 0.703910 0.0499252 2.1590e-02 0.981052 weaklyHypermeth 3.1290e-01 1 insignificant 8.8408e-02 0.56062 insignificant 1.0000e+00 1 insignificant 0.029090 5.8201e-01 lowCoverage 1.0000e+00 lowCoverage 0.758228 0.825549 -0.0729562 5 0.753835 0.826439 -0.07260346 9.9990e-01 0.0010954 weaklyHypometh 1.0000e+00 0.54769 insignificant 9.9941e-01 0.0019616 weaklyHypometh 1.0000e+00 0.9808 insignificant -0.0684489 4.9782e-02 lowCoverage 1.00000000 lowCoverage 0.772432 0.7052342 0.0719556 5 0.759543 0.703910 0.055633 8.9286e-04 0.953134 weaklyHypermeth 1.6234e-02 1 weaklyHypermeth 6.3956e-03 0.973458 weaklyHypermeth 1.3324e-01 1 insignificant 0.07512827 2.1028e-01 lowCoverage 1.0000e+00 lowCoverage 0.772432 0.825549 -0.0602054 5 0.759543 0.826439 -0.0668959 9.9406e-01 0.0163493 weaklyHypometh 1.0000e+00 1 insignificant 9.3711e-01 0.32445 insignificant 1.0000e+00 1 insignificant -0.0224108 5.4355e-01 lowCoverage 1.0000000 lowCoverage 0.7052342 0.825549 -0.12850612 5 0.703910 0.826439 -0.1225287 0.999981 3.5049e-04 weaklyHypometh 1 1.4604e-02 weaklyHypometh 0.997245 1.6514e-02 weaklyHypometh 1 4.0278e-01 insignificant -0.097539 0.11674872 lowCoverage 1.000000 lowCoverage chr14 68052417 68053417 128103 ENSG00000213482 0.82786 52 5 0.7608658 84 5 0.503838 52 5 0.7261905 72 5 0.834740 40 5 0.736368 129 5 0.738095 31 5 0.6787471 96 5 0.8017361 61 5 0.76624 48 5 0.750677 91 5 0.700000 6 0 0.8585966 85 5 0.71273 28 2 0.6800000 50 5 0.6500000 20 0 0.733333 7 0 0.863702 87 5 0.692195 79 5 0.755022 129 5 0.675926 41 4 0.702020 56 5 0.817857 45 3 0.41958 68 5 0.685714 19 1 0.537775 93 5 0.60333 44 1 0.12222 21 1 0.77807 69 5 0.5539886 91 5 0.759921 91 5 0.8130839 153 5 0.7194258 60 5 0.5883333 55 5 0.70079 117 5 0.600000 11 0 0.625000 43 1 0.727273 94 5 0.746091 94 5 0.8416667 68 5 0.754545 50 5 0.6292271 39 1 0.7750000 61 5 0.723135 0.738884 0.5148748 0.657860 0.8024818 0.649895 0.497717 0.6897785 0.6625190 0.73958 0.667116 0.650685 0.7533707 0.60922 0.5410959 0.5993151 0.707763 0.7055585 0.650551 0.712095 0.632855 0.789954 0.727691 0.58374 0.606654 0.6979057 0.5949772 0.31142 0.72448 0.6437771 0.6842792 0.6720481 0.6757423 0.5286910 0.670472 0.561644 0.508562 0.6948941 0.6923591 0.775913 0.754759 0.5655648 0.7619863 1 0.692061 0.672566 0.00762271 5 0.820591 0.619289 0.2013021 0.028694 0.97708795 weaklyHypermeth 1 1.00000 insignificant 0.015735 0.99444337 weaklyHypermeth 1 1.00000 insignificant 0.1160889 0.0755576 lowCoverage 1.0000 lowCoverage 0.691070 0.6394737 0.0479952 5 0.794962 0.696219 0.0987425 2.5399e-01 0.986414 insignificant 1.0000e+00 1 insignificant 9.2611e-03 0.98268 weaklyHypermeth 1.6248e-01 1 insignificant 0.078409 3.0597e-02 lowCoverage 5.9994e-01 lowCoverage 0.691070 0.733974 -0.0418785 5 0.794962 0.805246 -0.01028484 7.2003e-01 0.2852212 insignificant 1.0000e+00 1.00000 insignificant 5.5127e-01 0.4661388 insignificant 1.0000e+00 1.0000 insignificant -0.0107593 7.9100e-01 lowCoverage 1.00000000 lowCoverage 0.673496 0.6394737 0.0417008 5 0.622045 0.696219 -0.074174 2.1088e-01 0.736094 insignificant 1.0000e+00 1 insignificant 4.4744e-01 0.758799 insignificant 1.0000e+00 1 insignificant -0.03767972 5.5791e-01 lowCoverage 1.0000e+00 lowCoverage 0.673496 0.733974 -0.0506425 5 0.622045 0.805246 -0.1832015 8.9717e-01 0.0131449 weaklyHypometh 1.0000e+00 1 insignificant 9.6185e-01 0.11406 insignificant 1.0000e+00 1 insignificant -0.1268482 7.7320e-02 lowCoverage 1.0000000 lowCoverage 0.6394737 0.733974 -0.09115355 5 0.696219 0.805246 -0.1090273 0.984934 1.7362e-01 insignificant 1 1.0000e+00 insignificant 0.978960 1.1088e-01 insignificant 1 1.0000e+00 insignificant -0.089169 0.07223329 lowCoverage 1.000000 lowCoverage chr14 68143580 68144580 128116 ENSG00000213482 0.79975 368 6 0.7675084 186 6 0.752054 188 6 0.7941501 342 6 0.620098 108 6 0.816798 318 6 0.829474 162 6 0.6926793 119 6 0.7355515 280 6 0.87356 180 6 0.820325 220 6 0.743280 150 6 0.7262308 246 6 0.79279 113 4 0.8291352 194 6 0.8439989 105 6 0.623527 134 6 0.718958 434 6 0.848738 101 6 0.648229 306 6 0.672178 115 6 0.357556 208 6 0.798526 232 6 0.69785 123 6 0.755459 103 6 0.739439 184 6 0.68198 157 6 0.70661 119 6 0.62579 144 6 0.7479467 170 6 0.838168 174 6 0.8384485 324 6 0.3457843 175 6 0.3036488 123 6 0.50835 242 3 0.368519 60 6 0.380210 168 6 0.341663 195 6 0.703217 401 6 0.6341678 380 6 0.498720 347 4 0.3285817 399 6 0.4646056 371 6 0.825922 0.726066 0.7264233 0.777504 0.5985413 0.812840 0.768198 0.6630131 0.7146287 0.83245 0.814852 0.753054 0.6547834 0.79800 0.7399508 0.8182936 0.564224 0.6827946 0.803207 0.703312 0.793686 0.340202 0.827102 0.78186 0.806545 0.6927649 0.6826769 0.77421 0.69788 0.6738763 0.8025415 0.8720177 0.3675805 0.3609162 0.591177 0.342558 0.387044 0.2922023 0.6249666 0.609976 0.467148 0.3082623 0.5237669 5 0.752703 0.730638 0.01714377 6 0.796066 0.663434 0.1326327 0.028630 0.97535173 weaklyHypermeth 1 1.00000 insignificant 0.246131 0.69577616 insignificant 1 1.00000 insignificant 0.0588461 0.1651699 insignificant 1.0000 insignificant 0.752529 0.3925234 0.3557104 6 0.762077 0.373642 0.3884351 1.7584e-29 1.000000 hypermethylated 3.5167e-27 1 hypermethylated 3.1275e-12 0.99976 hypermethylated 7.9999e-10 1 hypermethylated 0.389147 1.3086e-06 hypermethylated 1.6357e-04 hypermethylated 0.752703 0.523182 0.2307288 6 0.796066 0.532831 0.26323524 6.2878e-15 1.0000000 hypermethylated 6.2878e-12 1.00000 hypermethylated 9.2381e-10 1.0000000 hypermethylated 9.2381e-07 1.0000 hypermethylated 0.2379838 2.0206e-02 weaklyHypermeth 1.00000000 insignificant 0.731220 0.3925234 0.3386657 6 0.718450 0.373642 0.344808 1.1418e-12 0.999965 hypermethylated 6.3433e-11 1 hypermethylated 2.9224e-09 0.999987 hypermethylated 4.8706e-07 1 hypermethylated 0.33030072 2.9871e-06 hypermethylated 3.7338e-04 hypermethylated 0.730638 0.523182 0.2190905 6 0.663434 0.532831 0.1306025 3.8222e-05 0.9984774 hypermethylated 2.5319e-03 1 hypermethylated 7.7238e-06 0.99976 hypermethylated 1.9310e-03 1 hypermethylated 0.1791377 5.0969e-02 insignificant 1.0000000 insignificant 0.3925234 0.523207 -0.10503057 6 0.373642 0.538303 -0.1646606 0.587212 6.5773e-06 weaklyHypometh 1 4.8853e-04 weaklyHypometh 0.710402 6.1486e-04 weaklyHypometh 1 5.1238e-02 weaklyHypometh -0.151163 0.08402815 insignificant 1.000000 insignificant chr14 68289649 68290649 128136 ENSG00000207089 0.67344 250 5 0.8206890 373 5 0.654864 62 4 0.7864351 131 5 0.702833 86 5 0.825870 512 5 0.822159 100 5 0.8362474 160 5 0.8175556 80 5 0.88148 28 2 0.840955 239 5 0.750000 32 2 0.8333333 57 5 0.82256 60 5 0.8657143 54 5 0.9000000 18 2 0.943429 340 4 0.676537 154 5 0.895650 193 5 0.823950 373 5 0.838462 37 3 1.000000 2 0 0.725121 137 5 0.68532 53 3 0.463636 24 2 0.854167 343 5 0.83722 116 4 0.73413 55 3 0.88390 221 5 0.7982732 345 5 0.843358 319 5 0.8472771 363 5 0.5282247 183 5 0.7278413 123 5 0.56017 226 5 0.625000 16 2 0.605159 112 4 0.717320 388 5 0.828346 361 5 0.6871043 249 5 0.720847 155 5 0.8314038 190 5 0.7487975 213 5 0.902878 0.828386 0.8746582 0.871513 0.8340728 0.877389 0.772261 0.8817760 0.8295476 0.85484 0.887042 0.885714 0.8395238 0.83534 0.9438776 0.8178571 0.969754 0.8883913 0.884130 0.886957 0.825275 0.879072 0.824827 0.82252 0.231169 0.9087276 0.8432174 0.92381 0.89173 0.9218750 0.8855059 0.8931959 0.4921350 0.6512477 0.673712 0.594914 0.488231 0.8018721 0.9065566 0.889403 0.934306 0.8551324 0.8274462 2 0.877650 0.884367 -0.00848248 5 0.771083 0.782839 -0.0117557 0.841766 0.50181533 insignificant 1 1.00000 insignificant 0.776755 0.61725557 insignificant 1 1.00000 insignificant 0.0161136 0.7072811 lowCoverage 1.0000 lowCoverage 0.877650 0.6374046 0.2404209 5 0.771083 0.693336 0.0777467 7.4364e-10 0.957202 hypermethylated 1.9570e-08 1 hypermethylated 1.8155e-04 0.95580 hypermethylated 5.1871e-03 1 hypermethylated 0.181400 1.2720e-03 lowCoverage 4.1960e-02 lowCoverage 0.877650 0.873288 0.0015297 5 0.771083 0.686485 0.08459808 2.8509e-01 0.7587909 insignificant 1.0000e+00 1.00000 insignificant 2.6171e-01 0.8338482 insignificant 1.0000e+00 1.0000 insignificant 0.0453851 2.2081e-01 lowCoverage 1.00000000 lowCoverage 0.884367 0.6374046 0.2493467 5 0.782839 0.693336 0.089502 8.9534e-07 0.916986 hypermethylated 2.1837e-05 1 hypermethylated 3.0749e-03 0.953439 weaklyHypermeth 7.1016e-02 1 weaklyHypermeth 0.16528609 5.1867e-03 lowCoverage 1.3857e-01 lowCoverage 0.884367 0.873288 0.0106421 5 0.782839 0.686485 0.0963538 7.5983e-02 0.8681759 insignificant 1.0000e+00 1 insignificant 1.4034e-01 0.77170 insignificant 1.0000e+00 1 insignificant 0.0292715 5.5060e-01 lowCoverage 1.0000000 lowCoverage 0.6374046 0.873288 -0.23924043 5 0.693336 0.686485 0.0068514 0.997444 1.9736e-03 weaklyHypometh 1 5.0604e-02 weaklyHypometh 0.876697 3.8791e-03 weaklyHypometh 1 1.7325e-01 insignificant -0.136015 0.01290441 lowCoverage 0.379542 lowCoverage chr14 68343407 68344407 128138 C14orf181 ENSG00000221899 0.84430 246 5 0.7076299 237 5 0.551605 137 5 0.8640223 197 5 0.749576 106 5 0.758306 273 5 0.787325 104 5 0.8381366 153 5 0.6975257 152 5 0.86713 92 5 0.829520 182 5 0.901552 76 3 0.7620369 200 5 0.71004 76 4 0.7690960 179 5 0.8611722 59 2 0.741667 18 1 0.591901 248 5 0.784632 172 5 0.633615 164 4 0.687473 78 5 0.602991 96 5 0.821885 105 5 0.73770 103 4 0.703197 88 5 0.814507 269 5 0.81380 81 2 0.93202 103 2 0.86347 191 5 0.8732102 272 5 0.832059 241 5 0.8581488 206 5 0.1095528 250 5 0.0000000 97 5 0.00000 54 1 0.053571 36 4 0.080513 184 5 0.073438 217 5 0.827631 159 5 0.4973898 172 5 0.774945 164 5 0.5751573 139 5 0.6545977 119 5 0.846631 0.740013 0.5893017 0.857358 0.8270662 0.811751 0.781743 0.7853427 0.7238330 0.73161 0.833755 0.803261 0.8027628 0.78163 0.7524623 0.8138634 0.764165 0.5378424 0.769558 0.757755 0.657677 0.605000 0.832126 0.81502 0.753710 0.8168748 0.7590823 0.86335 0.79244 0.8669328 0.8251956 0.8122119 0.0502442 0.0000000 NA 0.013194 0.033339 0.0345478 0.8187942 0.590032 0.760415 0.6224870 0.6236639 2 0.764897 0.807420 -0.04274103 5 0.756780 0.809451 -0.0526715 0.995377 0.00737251 weaklyHypometh 1 0.73725 insignificant 0.963305 0.12115374 insignificant 1 1.00000 insignificant -0.0324987 0.3530712 lowCoverage 1.0000 lowCoverage 0.764897 0.0453461 0.7196459 5 0.756780 0.078974 0.6778054 1.5586e-50 1.000000 hypermethylated 1.5586e-47 1 hypermethylated 1.1844e-12 1.00000 hypermethylated 5.9219e-10 1 hypermethylated 0.709694 6.8173e-16 lowCoverage 6.8173e-13 lowCoverage 0.764897 0.682603 0.0803581 5 0.756780 0.664433 0.09234701 8.5387e-04 0.9962168 weaklyHypermeth 3.1625e-02 1.00000 weaklyHypermeth 7.3119e-03 0.9898586 weaklyHypermeth 3.2062e-01 1.0000 insignificant 0.0965956 1.9570e-01 lowCoverage 1.00000000 lowCoverage 0.807420 0.0453461 0.7618180 5 0.809451 0.078974 0.730477 5.8777e-44 1.000000 hypermethylated 5.8777e-41 1 hypermethylated 1.7769e-11 1.000000 hypermethylated 8.8843e-09 1 hypermethylated 0.74219268 1.3022e-13 lowCoverage 1.3022e-10 lowCoverage 0.807420 0.682603 0.1242879 5 0.809451 0.664433 0.1450185 4.0510e-05 0.9999830 weaklyHypermeth 2.5319e-03 1 weaklyHypermeth 7.0718e-03 0.99976 weaklyHypermeth 3.4617e-01 1 insignificant 0.1290943 1.0487e-01 lowCoverage 1.0000000 lowCoverage 0.0453461 0.682603 -0.63524355 5 0.078974 0.664433 -0.5854584 1.000000 6.6688e-20 hypomethylated 1 3.3344e-17 hypomethylated 1.000000 2.8010e-07 hypomethylated 1 9.3368e-05 hypomethylated -0.613098 0.00028463 lowCoverage 0.049853 lowCoverage chr14 68350823 68351823 128141 C14orf181 ENSG00000221899 0.32012 166 4 0.2686044 279 5 0.291265 210 5 0.3367628 154 4 0.307688 135 5 0.371929 463 5 0.356043 201 5 0.2516008 219 5 0.2232700 219 5 0.30347 178 5 0.326564 236 5 0.361174 140 5 0.3471861 173 5 0.28759 137 5 0.2047677 265 5 0.1667857 174 4 0.066667 10 1 0.239017 185 4 0.284803 213 4 0.231856 239 5 0.360809 123 5 0.050366 63 3 0.315148 185 5 0.25866 188 5 0.232903 73 2 0.241960 339 5 0.24633 264 5 0.33941 127 5 0.40381 208 4 0.2867670 425 5 0.272672 341 5 0.4098693 307 5 0.1145866 190 5 0.2469114 148 4 0.32439 73 4 0.294444 28 2 0.235986 211 5 0.300823 265 5 0.251312 279 4 0.3699916 197 4 0.081564 132 4 0.1049107 184 4 0.1533841 135 4 0.232878 0.220890 0.2548641 0.245746 0.3093364 0.328796 0.293601 0.1826088 0.1929730 0.25338 0.286390 0.261787 0.2600589 0.28639 0.2001378 0.1753126 0.200323 0.2013467 0.181099 0.159807 0.364872 0.211174 0.259710 0.23320 0.211491 0.2065734 0.2283203 0.26592 0.26264 0.2357656 0.2049272 0.3311589 0.0943404 0.1464791 0.342369 0.228854 0.184781 0.3030491 0.2022770 0.284571 0.090907 0.0899015 0.1553446 4 0.298799 0.323496 -0.01831944 5 0.284907 0.291982 -0.0070756 0.548733 0.20883401 insignificant 1 1.00000 insignificant 0.515570 0.35973980 insignificant 1 1.00000 insignificant -0.0075352 0.8182599 lowCoverage 1.0000 lowCoverage 0.298799 0.1704918 0.1561784 5 0.284907 0.221795 0.0631123 6.5599e-10 0.066758 weaklyHypermeth 1.7729e-08 1 weaklyHypermeth 3.6641e-04 0.24454 weaklyHypermeth 9.6423e-03 1 weaklyHypermeth 0.024501 5.0444e-01 lowCoverage 1.0000e+00 lowCoverage 0.298799 0.202805 0.1294087 4 0.284907 0.207407 0.07749943 5.2825e-06 0.8961192 lowCoverage 2.9347e-04 1.00000 lowCoverage 2.3089e-05 0.9804904 lowCoverage 2.0990e-03 1.0000 lowCoverage 0.0851257 1.8912e-01 lowCoverage 1.00000000 lowCoverage 0.323496 0.1704918 0.1820524 5 0.291982 0.221795 0.070188 2.0482e-08 0.075098 weaklyHypermeth 6.4006e-07 1 weaklyHypermeth 3.1247e-03 0.029052 weaklyHypermeth 7.1016e-02 1 weaklyHypermeth 0.03203632 4.5413e-01 lowCoverage 1.0000e+00 lowCoverage 0.323496 0.202805 0.1643098 4 0.291982 0.207407 0.0845751 1.2924e-05 0.7486485 lowCoverage 1.1749e-03 1 lowCoverage 3.2200e-04 0.89426 lowCoverage 3.5777e-02 1 lowCoverage 0.0926608 1.7065e-01 lowCoverage 1.0000000 lowCoverage 0.1704918 0.202805 -0.02893301 4 0.221795 0.207407 0.0143871 0.634603 1.5622e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.568410 3.1833e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.060624 0.35886327 lowCoverage 1.000000 lowCoverage chr14 72149372 72150372 128275 ENSG00000200298 0.89873 233 5 0.7036364 46 4 0.731288 98 5 0.8278571 86 5 0.809524 43 5 0.821429 15 1 0.839524 32 2 0.9470356 64 4 0.7640643 102 5 0.95312 169 5 0.905303 69 5 0.842807 56 5 0.8950062 169 5 0.88718 96 5 0.8249206 62 5 0.8220952 55 5 0.859259 37 4 0.717973 252 5 0.901082 64 5 0.682182 155 5 0.888889 9 1 0.620000 25 3 0.833333 6 1 0.76000 19 2 0.946667 32 4 0.907715 64 5 0.86606 83 4 0.83213 115 5 0.87733 85 5 0.9051515 77 5 0.888934 117 5 0.7637431 204 5 0.4166667 20 1 0.7904762 60 5 0.83333 8 1 0.887778 42 3 0.541775 39 4 0.853963 144 5 0.898099 245 5 0.8905388 107 5 0.858917 198 5 0.9072639 123 4 0.9589018 264 5 0.925117 0.815946 0.7307501 0.821136 0.7982045 0.792853 0.768150 0.9393507 0.8292422 0.90821 0.872889 0.804908 0.8413124 0.81862 0.7645719 0.6883685 0.743169 0.8080388 0.873536 0.855615 NA 0.767213 NA 0.94426 0.926230 0.8987727 0.8100943 0.79494 0.86093 0.8807750 0.8597797 0.9040939 0.6684494 0.6580796 0.767095 0.867486 0.725570 0.7952110 0.8975269 0.866002 0.836506 0.8959631 0.9721848 0 0.867578 0.880383 -0.02021302 5 0.781847 0.767500 0.0143473 0.840171 0.31659755 insignificant 1 1.00000 insignificant 0.980017 0.15722505 insignificant 1 1.00000 insignificant -0.0091282 0.7729231 lowCoverage 1.0000 lowCoverage 0.867895 0.8210863 0.0396788 5 0.801044 0.689430 0.1116134 2.2428e-01 0.960098 insignificant 1.0000e+00 1 insignificant 5.1307e-01 0.93028 insignificant 1.0000e+00 1 insignificant 0.111036 2.2385e-01 lowCoverage 1.0000e+00 lowCoverage 0.867964 0.897545 -0.0250616 5 0.828822 0.920589 -0.09176689 9.2866e-01 0.1075951 insignificant 1.0000e+00 1.00000 insignificant 7.9523e-01 0.1560476 insignificant 1.0000e+00 1.0000 insignificant -0.0710427 9.7833e-03 lowCoverage 0.65222111 lowCoverage 0.881437 0.8210863 0.0609502 5 0.895416 0.689430 0.205986 2.3974e-01 0.991939 insignificant 1.0000e+00 1 insignificant 3.1460e-01 0.979641 insignificant 1.0000e+00 1 insignificant 0.12016431 1.9805e-01 lowCoverage 1.0000e+00 lowCoverage 0.880240 0.897545 -0.0085278 5 0.728750 0.920589 -0.1918388 7.5990e-01 0.1322316 insignificant 1.0000e+00 1 insignificant 7.4633e-01 0.26060 insignificant 1.0000e+00 1 insignificant -0.0619144 6.0266e-02 lowCoverage 1.0000000 lowCoverage 0.8237179 0.897436 -0.07308636 5 0.827317 0.904706 -0.0773897 0.962231 9.2889e-02 insignificant 1 1.0000e+00 insignificant 0.972417 2.1185e-01 insignificant 1 1.0000e+00 insignificant -0.182079 0.06971484 lowCoverage 1.000000 lowCoverage chr14 72278217 72279217 128294 ENSG00000200298 0.65897 253 10 0.4424575 251 10 0.693038 173 10 0.6979021 147 8 0.594778 108 8 0.884330 209 9 0.602067 172 11 0.6673171 218 10 0.6323187 121 10 0.60963 114 7 0.846868 304 10 0.601428 108 6 0.4868689 184 11 0.63519 52 5 0.5105997 136 8 0.3404762 53 6 0.610734 52 4 0.524320 223 8 0.866691 186 10 0.656794 152 7 0.840936 115 7 0.647619 78 3 0.592286 199 12 0.55805 81 7 0.739604 231 6 0.666381 230 10 0.68715 165 7 0.60513 52 4 0.74282 196 10 0.7670450 289 10 0.704910 239 10 0.8242671 198 8 0.1884258 289 10 0.2410856 283 10 0.36931 295 10 0.401883 178 6 0.321375 203 11 0.386529 352 11 0.566536 233 9 0.6199077 223 10 0.492651 129 5 0.3940891 162 7 0.5492554 194 6 0.681588 0.475566 0.5845762 0.655460 0.7541566 0.830558 0.866530 0.6538432 0.8424111 0.81715 0.817530 0.757501 0.6224650 0.71402 0.7662257 0.4850068 0.668966 0.4712026 0.815346 0.756691 0.873945 0.487140 0.762681 0.81865 0.767249 0.7507652 0.7889835 0.54566 0.60671 0.7497931 0.6594927 0.8787140 0.2811330 0.2860706 0.458007 0.349878 0.400508 0.3379165 0.5358154 0.562880 0.397280 0.2772116 0.4747229 4 0.700187 0.767487 -0.07966343 10 0.507041 0.608904 -0.1018625 0.999200 0.00018114 weaklyHypometh 1 0.18114 insignificant 0.999096 0.00425307 weaklyHypometh 1 1.00000 insignificant -0.0698774 0.0892438 insignificant 1.0000 insignificant 0.700187 0.3325000 0.3650283 10 0.507041 0.263600 0.2434416 1.7106e-27 0.999999 hypermethylated 2.8509e-25 1 hypermethylated 6.5431e-12 1.00000 hypermethylated 1.3086e-09 1 hypermethylated 0.310037 1.3760e-05 hypermethylated 1.0387e-03 hypermethylated 0.709453 0.456961 0.2213584 9 0.594006 0.519263 0.07474335 3.5231e-10 0.7585239 hypermethylated 3.5231e-08 1.00000 hypermethylated 5.3349e-07 0.9524732 hypermethylated 1.1211e-04 1.0000 hypermethylated 0.1036510 6.0814e-02 insignificant 1.00000000 insignificant 0.767487 0.3325000 0.4389757 10 0.608904 0.263600 0.345304 1.3792e-30 1.000000 hypermethylated 3.4481e-28 1 hypermethylated 1.7543e-11 1.000000 hypermethylated 8.8843e-09 1 hypermethylated 0.37991464 4.0788e-06 hypermethylated 4.5320e-04 hypermethylated 0.775122 0.456961 0.2937460 9 0.763625 0.519263 0.2443617 5.0792e-14 0.9998988 hypermethylated 2.5396e-11 1 hypermethylated 3.4545e-07 0.99954 hypermethylated 1.7272e-04 1 hypermethylated 0.1735283 5.8248e-03 weaklyHypermeth 0.5824830 insignificant 0.3348045 0.456961 -0.10845289 9 0.306246 0.519263 -0.2130173 0.999990 2.9226e-05 weaklyHypometh 1 1.4613e-03 weaklyHypometh 0.999994 8.5642e-03 weaklyHypometh 1 2.5189e-01 insignificant -0.206386 0.00355373 weaklyHypometh 0.177687 insignificant chr14 73376464 73377464 128340 ENSG00000210224 0.72481 240 7 0.6845559 202 10 0.636612 128 8 0.7188095 181 7 0.817361 91 5 0.699980 438 10 0.561231 108 7 0.7457655 208 10 0.7719565 108 7 0.67324 93 10 0.806729 328 10 0.768838 75 4 0.7482161 144 10 0.86054 29 2 0.7713435 117 5 0.5422237 80 4 0.608407 80 6 0.773795 150 7 0.738344 170 7 0.697081 272 10 0.848124 53 5 0.882332 83 9 0.746499 175 10 0.86328 74 8 0.866744 76 6 0.752666 278 10 0.78333 96 7 0.68355 49 3 0.87951 131 7 0.7996186 240 10 0.735285 271 10 0.8038398 377 10 0.6725987 136 10 0.6363333 150 7 0.66690 158 10 0.521088 32 3 0.713107 79 6 0.696261 218 10 0.853247 168 7 0.7603730 252 10 0.765491 211 7 0.8625558 171 7 0.8043485 188 10 0.817149 0.687261 0.6405706 0.787254 0.8377375 0.817012 0.665629 0.7562169 0.7502349 0.73585 0.799149 0.822492 0.8500004 0.77036 0.7651648 0.6935640 0.819019 0.8106099 0.790765 0.773595 0.799572 0.873941 0.833260 0.91557 0.866126 0.7772379 0.7887737 0.74741 0.82922 0.7871112 0.7391840 0.7779857 0.6787481 0.6647915 0.751822 0.610487 0.742459 0.6989769 0.7966204 0.831058 0.823588 0.8331146 0.8043362 2 0.760049 0.802417 -0.02574661 10 0.707909 0.819185 -0.1112760 0.996794 0.00578463 weaklyHypometh 1 0.64274 insignificant 0.999326 0.00837469 weaklyHypometh 1 1.00000 insignificant -0.0862390 0.0028966 weaklyHypometh 0.7951 insignificant 0.760297 0.6972833 0.0738387 10 0.716901 0.669921 0.0469802 1.4697e-06 0.928804 weaklyHypermeth 3.0739e-05 1 weaklyHypermeth 7.1701e-05 0.99038 weaklyHypermeth 2.6820e-03 1 weaklyHypermeth 0.066445 7.7177e-02 insignificant 1.0000e+00 insignificant 0.760124 0.775758 -0.0367160 7 0.714777 0.815621 -0.10084441 9.9670e-01 0.0136460 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9789e-01 0.0299499 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0917109 7.7851e-03 weaklyHypometh 0.55608098 insignificant 0.802313 0.6972833 0.0991453 10 0.804117 0.669921 0.134196 4.0370e-09 0.999989 weaklyHypermeth 1.3921e-07 1 weaklyHypermeth 3.8489e-06 1.000000 weaklyHypermeth 2.7492e-04 1 weaklyHypermeth 0.15268386 1.2397e-03 weaklyHypermeth 4.2748e-02 weaklyHypermeth 0.801897 0.775531 -0.0195389 7 0.804117 0.800256 0.0038604 9.7719e-01 0.4638677 insignificant 1.0000e+00 1 insignificant 9.7033e-01 0.66030 insignificant 1.0000e+00 1 insignificant -0.0054719 8.5126e-01 insignificant 1.0000000 insignificant 0.6964981 0.775304 -0.12322205 7 0.639914 0.782098 -0.1421841 0.999957 1.7052e-09 weaklyHypometh 1 2.8421e-07 weaklyHypometh 1.000000 3.9717e-07 weaklyHypometh 1 9.9293e-05 weaklyHypometh -0.158156 0.00162903 weaklyHypometh 0.103517 insignificant chr14 73757806 73758806 128370 ENSG00000210266,ENSG00000222523 0.79535 236 3 0.8422064 155 5 0.926345 128 5 0.8303086 274 3 0.721595 115 5 0.721806 440 6 0.846203 162 5 0.9203783 142 5 0.8567068 143 5 0.89381 98 5 0.842923 212 5 0.812747 61 5 0.9158754 119 5 0.89305 58 3 0.7562176 119 4 0.8848485 55 5 0.723039 32 3 0.869006 404 3 0.859195 146 3 0.853580 307 5 0.919235 98 3 0.884848 89 3 0.815804 127 4 0.82628 118 4 0.788480 321 3 0.871100 216 5 0.71106 99 5 0.89957 70 5 0.85888 160 3 0.8616904 233 5 0.936254 195 5 0.8456259 346 7 0.8092740 225 5 0.7339286 128 3 0.64433 238 3 0.910714 92 3 0.737592 127 5 0.700337 243 3 0.765006 217 3 0.6332058 234 3 0.727978 303 3 0.7324532 244 3 0.8138964 205 5 0.811772 0.695715 0.8327321 0.821262 0.6863802 0.891907 0.770753 0.8739655 0.7694999 0.89642 0.919786 0.694971 0.9231717 0.82543 0.8524540 0.8681257 0.680499 0.8251871 0.774126 0.892010 0.820983 0.812290 0.849817 0.71001 0.912973 0.8927714 0.8064603 0.78932 0.82065 0.8941798 0.8956654 0.8511218 0.6451445 0.7185906 0.636564 0.795370 0.763553 0.8983877 0.6973078 0.589943 0.585343 0.7936175 0.7248237 3 0.839401 0.856178 -0.01865362 5 0.828519 0.843694 -0.0151750 0.843844 0.36912042 insignificant 1 1.00000 insignificant 0.877653 0.17836608 insignificant 1 1.00000 insignificant -0.0133088 0.5668513 lowCoverage 1.0000 lowCoverage 0.839401 0.7255461 0.0901849 3 0.828519 0.740243 0.0882765 1.2688e-04 0.761970 lowCoverage 2.3940e-03 1 lowCoverage 8.3257e-02 0.78019 lowCoverage 1.0000e+00 1 lowCoverage 0.082230 8.5493e-02 lowCoverage 1.0000e+00 lowCoverage 0.839401 0.583541 0.2248577 3 0.828519 0.750017 0.07850257 1.0806e-07 0.0115573 lowCoverage 7.7186e-06 1.00000 lowCoverage 8.2201e-05 0.0059448 lowCoverage 6.8501e-03 1.0000 lowCoverage 0.1037517 1.9565e-02 lowCoverage 1.00000000 lowCoverage 0.856178 0.7255461 0.1117657 3 0.843694 0.740243 0.103452 2.1227e-03 0.869659 lowCoverage 3.6597e-02 1 lowCoverage 5.7796e-02 0.936206 lowCoverage 8.9723e-01 1 lowCoverage 0.09553891 5.5142e-02 lowCoverage 9.1903e-01 lowCoverage 0.856178 0.583541 0.2462146 3 0.843694 0.750017 0.0936776 1.5004e-06 0.1267342 lowCoverage 1.5004e-04 1 lowCoverage 4.6982e-04 0.30722 lowCoverage 4.2711e-02 1 lowCoverage 0.1170605 1.1451e-02 lowCoverage 0.9542821 lowCoverage 0.7255461 0.583541 0.14843928 3 0.740243 0.750017 -0.0097739 0.026428 1.1536e-03 lowCoverage 1 3.7213e-02 lowCoverage 0.030483 1.3532e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.021522 0.66548066 lowCoverage 1.000000 lowCoverage chr14 74410079 74411079 128398 PROX2 ENSG00000119608 0.76231 71 6 0.5628642 73 6 0.650000 22 2 0.6938530 72 6 0.671875 46 4 0.749599 69 6 0.434375 48 4 0.5841346 68 6 0.7104167 27 2 0.57292 22 1 0.754960 157 6 0.508333 33 4 0.6543651 73 8 0.56936 57 8 0.7380952 51 7 0.4285714 15 2 0.666667 14 0 0.629541 62 3 0.776557 60 6 0.690476 42 6 0.720000 18 2 0.800000 19 3 0.655506 67 8 0.83333 30 6 0.698364 41 2 0.646021 97 6 0.74490 36 4 0.50000 4 0 0.73106 43 4 0.6393995 85 6 0.628517 78 6 0.6897321 47 6 0.6729630 77 6 0.5939394 62 6 0.89491 116 6 0.333333 25 2 0.661174 62 5 0.785881 97 6 0.703175 49 6 0.8541667 62 6 0.616844 83 6 0.7559524 29 2 0.7797203 72 6 0.849747 0.639375 0.7000000 0.758471 0.7916667 0.832799 0.516667 0.7788462 0.8361111 0.72222 0.839947 0.566667 0.7989418 0.54451 0.7857143 0.4754112 0.912494 0.7143875 0.739316 0.753968 0.766548 0.831620 0.735119 0.83333 0.814757 0.8023654 0.8690476 0.82392 0.79630 0.7691993 0.6713564 0.7529762 0.7316667 0.6252525 0.877395 0.333333 0.770455 0.7858808 0.6537037 0.854167 0.655792 0.8888889 0.7797203 0 0.689815 0.768142 -0.04510829 6 0.659468 0.620385 0.0390840 0.822000 0.00271297 weaklyHypometh 1 0.63795 insignificant 0.903352 0.01847260 weaklyHypometh 1 1.00000 insignificant -0.0501060 0.1550604 lowCoverage 1.0000 lowCoverage 0.690167 0.7722096 -0.0139626 6 0.687246 0.700745 -0.0134992 8.6136e-01 0.787633 insignificant 1.0000e+00 1 insignificant 5.9441e-01 0.86766 insignificant 1.0000e+00 1 insignificant -0.016570 8.4535e-01 lowCoverage 1.0000e+00 lowCoverage 0.690167 0.722034 -0.0089904 6 0.687246 0.701889 -0.01464241 8.1220e-01 0.7220858 insignificant 1.0000e+00 1.00000 insignificant 9.3263e-01 0.6181353 insignificant 1.0000e+00 1.0000 insignificant -0.1015083 6.2403e-02 lowCoverage 1.00000000 lowCoverage 0.769504 0.7711670 0.0294535 6 0.697933 0.663339 0.034594 1.1872e-01 0.729595 insignificant 1.0000e+00 1 insignificant 2.7791e-02 0.815801 weaklyHypermeth 4.6318e-01 1 insignificant 0.03353591 6.9629e-01 lowCoverage 1.0000e+00 lowCoverage 0.769504 0.721088 0.0284615 6 0.697933 0.664625 0.0333078 2.2676e-01 0.7894299 insignificant 1.0000e+00 1 insignificant 3.2220e-01 0.78023 insignificant 1.0000e+00 1 insignificant -0.0514023 3.0767e-01 lowCoverage 1.0000000 lowCoverage 0.7722096 0.722034 0.01147176 6 0.700745 0.701889 -0.0011432 0.858668 8.3865e-01 insignificant 1 1.0000e+00 insignificant 0.987949 7.5501e-01 insignificant 1 1.0000e+00 insignificant -0.084938 0.36231103 insignificant 1.000000 insignificant chr14 74514498 74515498 128408 PGF ENSG00000119630 0.56739 108 4 0.5465448 216 5 0.387541 136 5 0.4969522 158 5 0.414333 54 4 0.595531 155 5 0.638528 113 5 0.5161392 188 5 0.4222043 99 4 0.49735 69 4 0.718699 206 5 0.386532 63 4 0.2800926 109 5 0.34524 91 4 0.3436341 122 4 0.8333333 23 2 0.000000 6 1 0.362287 129 5 0.258928 201 5 0.489340 100 4 0.846190 78 4 0.112350 88 4 0.712614 101 5 0.53405 58 4 0.561438 259 5 0.636358 222 5 0.41321 172 5 0.69312 45 3 0.61638 135 5 0.6764351 252 5 0.344374 242 5 0.9256667 138 5 0.3791374 171 5 0.1582667 154 5 0.80000 104 2 0.000000 5 0 0.534498 141 5 0.046291 288 5 0.064639 206 5 0.2188700 182 5 0.154073 138 5 0.1083113 172 5 0.1404136 157 5 0.573824 0.464882 0.3879201 0.469897 0.3527094 0.494482 0.500319 0.4719421 0.4496636 0.45092 0.746856 0.332649 0.2878491 0.40756 0.3707638 0.7204964 0.124329 0.3089149 0.267643 0.442617 0.811052 0.099068 0.682636 0.62515 0.445661 0.5944628 0.5175560 0.83087 0.59619 0.5481323 0.3301772 0.8765954 0.2296209 0.1335467 0.689840 0.090744 0.422129 0.0268408 0.0448319 0.131689 0.095637 0.0833876 0.0956905 2 0.462916 0.560335 -0.10205093 5 0.511791 0.570232 -0.0584409 0.989422 0.00419743 weaklyHypometh 1 0.63795 insignificant 0.993566 0.00030372 weaklyHypometh 1 0.30372 insignificant -0.1343193 0.0906165 lowCoverage 1.0000 lowCoverage 0.462916 0.2085747 0.2815907 5 0.511791 0.333017 0.1787742 2.4769e-08 0.990379 hypermethylated 6.1923e-07 1 hypermethylated 6.5328e-03 0.98196 weaklyHypermeth 1.2547e-01 1 insignificant 0.135331 3.4849e-01 lowCoverage 1.0000e+00 lowCoverage 0.462655 0.121637 0.3568870 5 0.480816 0.139808 0.34100864 4.1230e-14 1.0000000 hypermethylated 1.7535e-11 1.00000 hypermethylated 6.9016e-09 1.0000000 hypermethylated 3.4508e-06 1.0000 hypermethylated 0.3177685 1.3205e-06 lowCoverage 0.00026411 lowCoverage 0.560335 0.2085747 0.3743268 5 0.570232 0.333017 0.237215 4.6487e-08 0.998334 hypermethylated 1.4087e-06 1 hypermethylated 1.3692e-03 0.997889 weaklyHypermeth 3.4230e-02 1 weaklyHypermeth 0.26965026 9.6079e-02 lowCoverage 1.0000e+00 lowCoverage 0.560470 0.121637 0.4549268 5 0.584279 0.139808 0.4444711 6.1817e-13 1.0000000 hypermethylated 2.0606e-10 1 hypermethylated 2.3761e-09 1.00000 hypermethylated 2.3761e-06 1 hypermethylated 0.4520878 1.3167e-05 lowCoverage 0.0034247 lowCoverage 0.2069767 0.121637 0.08392066 5 0.266287 0.139808 0.1264796 0.070198 9.8556e-01 insignificant 1 1.0000e+00 insignificant 0.127093 9.8301e-01 insignificant 1 1.0000e+00 insignificant 0.182438 0.21371853 lowCoverage 1.000000 lowCoverage chr14 74790419 74791419 128426 ENSG00000210276 0.90108 319 5 0.7747202 408 6 0.857516 84 6 0.9357176 356 4 0.903068 119 6 0.862691 335 6 0.876209 182 6 0.8737148 143 6 0.9228732 114 6 0.97329 78 6 0.898049 241 6 0.803274 56 6 0.9194577 70 6 0.93561 53 4 0.8972222 75 6 0.9559295 45 4 0.753759 33 2 0.949119 378 4 0.890339 145 4 0.879284 130 5 0.799478 66 5 0.933333 9 0 0.921678 166 5 0.69741 83 6 0.767123 165 4 0.897274 269 6 0.91667 26 2 0.97917 38 4 0.80310 97 5 0.8673818 316 6 0.899715 369 6 0.8594342 247 6 0.6799594 230 6 0.6352743 122 6 0.62566 176 5 0.500000 4 0 0.809209 230 6 0.798703 286 5 0.960139 346 4 0.8570252 300 4 0.949683 359 4 0.9796672 224 2 0.7756922 348 5 0.900897 0.875908 0.8778062 0.927025 0.9603025 0.933096 0.917807 0.9171508 0.9146007 0.99443 0.940779 0.860197 0.9570765 0.95458 0.8562802 0.9864130 NA 0.9015808 0.954370 0.890955 0.683168 0.975845 0.917105 0.84894 0.878412 0.9350137 0.9637681 0.99094 0.89675 0.9386512 0.9338326 0.8773898 0.7228102 0.6853057 0.582713 0.531777 0.831304 0.6579180 0.9515041 0.945224 0.924704 0.9544291 0.8463329 0 0.905470 0.916216 -0.00652929 6 0.878330 0.883626 -0.0052964 0.758199 0.17444665 insignificant 1 1.00000 insignificant 0.587604 0.37158688 insignificant 1 1.00000 insignificant 0.0263328 0.3355135 lowCoverage 1.0000 lowCoverage 0.905470 0.6994275 0.2234136 6 0.878330 0.686488 0.1918419 3.2223e-14 0.980083 hypermethylated 1.6111e-12 1 hypermethylated 1.3028e-04 0.98681 hypermethylated 3.8319e-03 1 hypermethylated 0.213345 5.4601e-03 lowCoverage 1.4757e-01 lowCoverage 0.905470 0.928979 -0.0028375 4 0.878330 0.794504 0.08382575 2.1216e-03 0.4619299 lowCoverage 7.0720e-02 1.00000 lowCoverage 1.5021e-01 0.5949833 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.0162954 7.0487e-01 lowCoverage 1.00000000 lowCoverage 0.916216 0.6994275 0.2216668 6 0.883626 0.686488 0.197138 7.2328e-09 0.999993 hypermethylated 2.3332e-07 1 hypermethylated 9.9512e-04 0.999651 hypermethylated 2.5516e-02 1 hypermethylated 0.18701264 8.6193e-03 lowCoverage 2.0045e-01 lowCoverage 0.916216 0.928979 0.0058702 4 0.883626 0.794504 0.0891222 1.1021e-01 0.8859098 lowCoverage 1.0000e+00 1 lowCoverage 3.0779e-01 0.80636 lowCoverage 1.0000e+00 1 lowCoverage -0.0426282 3.7439e-01 lowCoverage 1.0000000 lowCoverage 0.6994275 0.928979 -0.21649843 4 0.686488 0.794504 -0.1080161 0.812720 5.6946e-04 lowCoverage 1 2.1902e-02 lowCoverage 0.949622 5.6547e-03 lowCoverage 1 1.8241e-01 lowCoverage -0.229641 0.00462500 lowCoverage 0.192708 lowCoverage chr14 74790632 74791632 128427 ENSG00000210276 0.90108 319 5 0.7747202 408 6 0.857516 84 6 0.9357176 356 4 0.903068 119 6 0.862691 335 6 0.876209 182 6 0.8737148 143 6 0.9228732 114 6 0.97329 78 6 0.898049 241 6 0.803274 56 6 0.9194577 70 6 0.93561 53 4 0.8972222 75 6 0.9559295 45 4 0.753759 33 2 0.949119 378 4 0.890339 145 4 0.879284 130 5 0.799478 66 5 0.933333 9 0 0.921678 166 5 0.69741 83 6 0.767123 165 4 0.897274 269 6 0.91667 26 2 0.97917 38 4 0.80310 97 5 0.8673818 316 6 0.899715 369 6 0.8594342 247 6 0.6799594 230 6 0.6352743 122 6 0.62566 176 5 0.500000 4 0 0.809209 230 6 0.798703 286 5 0.960139 346 4 0.8570252 300 4 0.949683 359 4 0.9796672 224 2 0.7756922 348 5 0.900897 0.875908 0.8778062 0.927025 0.9603025 0.933096 0.917807 0.9171508 0.9146007 0.99443 0.940779 0.860197 0.9570765 0.95458 0.8562802 0.9864130 NA 0.9015808 0.954370 0.890955 0.683168 0.975845 0.917105 0.84894 0.878412 0.9350137 0.9637681 0.99094 0.89675 0.9386512 0.9338326 0.8773898 0.7228102 0.6853057 0.582713 0.531777 0.831304 0.6579180 0.9515041 0.945224 0.924704 0.9544291 0.8463329 0 0.905470 0.916216 -0.00652929 6 0.878330 0.883626 -0.0052964 0.758199 0.17444665 insignificant 1 1.00000 insignificant 0.587604 0.37158688 insignificant 1 1.00000 insignificant 0.0263328 0.3355135 lowCoverage 1.0000 lowCoverage 0.905470 0.6994275 0.2234136 6 0.878330 0.686488 0.1918419 3.2223e-14 0.980083 hypermethylated 1.6111e-12 1 hypermethylated 1.3028e-04 0.98681 hypermethylated 3.8319e-03 1 hypermethylated 0.213345 5.4601e-03 lowCoverage 1.4757e-01 lowCoverage 0.905470 0.928979 -0.0028375 4 0.878330 0.794504 0.08382575 2.1216e-03 0.4619299 lowCoverage 7.0720e-02 1.00000 lowCoverage 1.5021e-01 0.5949833 lowCoverage 1.0000e+00 1.0000 lowCoverage -0.0162954 7.0487e-01 lowCoverage 1.00000000 lowCoverage 0.916216 0.6994275 0.2216668 6 0.883626 0.686488 0.197138 7.2328e-09 0.999993 hypermethylated 2.3332e-07 1 hypermethylated 9.9512e-04 0.999651 hypermethylated 2.5516e-02 1 hypermethylated 0.18701264 8.6193e-03 lowCoverage 2.0045e-01 lowCoverage 0.916216 0.928979 0.0058702 4 0.883626 0.794504 0.0891222 1.1021e-01 0.8859098 lowCoverage 1.0000e+00 1 lowCoverage 3.0779e-01 0.80636 lowCoverage 1.0000e+00 1 lowCoverage -0.0426282 3.7439e-01 lowCoverage 1.0000000 lowCoverage 0.6994275 0.928979 -0.21649843 4 0.686488 0.794504 -0.1080161 0.812720 5.6946e-04 lowCoverage 1 2.1902e-02 lowCoverage 0.949622 5.6547e-03 lowCoverage 1 1.8241e-01 lowCoverage -0.229641 0.00462500 lowCoverage 0.192708 lowCoverage chr14 75615844 75616844 128481 C14orf179 ENSG00000119650 0.89568 291 5 0.7817065 154 5 0.832222 94 5 0.9372101 296 6 0.846667 35 3 0.807406 283 5 0.911111 36 3 0.8135377 171 5 0.8891638 113 5 0.93515 140 5 0.876646 213 5 0.642857 25 3 0.8869644 156 5 0.89203 125 5 0.8646486 171 5 0.8400000 15 1 0.800000 7 0 0.872840 338 5 0.925476 165 5 0.877490 176 5 0.383333 16 0 0.742836 121 5 0.930278 92 5 0.85620 66 4 0.921228 78 5 0.953758 243 5 0.89476 81 5 0.76538 52 5 0.91714 194 5 0.8831180 247 5 0.922892 166 6 0.8618297 209 5 0.5233790 172 5 0.4847826 103 5 0.66038 113 3 0.958333 17 0 0.579444 75 5 0.916566 194 5 0.463959 127 5 0.7894720 251 5 0.823654 198 5 0.7570076 146 5 0.8938423 228 6 0.894739 0.784110 0.8401540 0.928718 0.8716172 0.938480 0.898790 0.8257722 0.8976135 0.93598 0.877516 0.697313 0.8854875 0.88906 0.8771837 0.8732673 0.841584 0.8695407 0.927110 0.860310 0.367162 0.736067 0.941309 0.86745 0.923015 0.9479354 0.8961608 0.73286 0.92071 0.9268226 0.9071464 0.8621558 0.5165928 0.4706199 0.595160 0.943069 0.563418 0.8982181 0.5448152 0.735560 0.780146 0.7695301 0.8658075 0 0.885115 0.884984 -0.00228216 5 0.900086 0.892922 0.0071640 0.570393 0.36146245 insignificant 1 1.00000 insignificant 0.539751 0.66938673 insignificant 1 1.00000 insignificant 0.0203770 0.6754925 lowCoverage 1.0000 lowCoverage 0.885115 0.6424332 0.2399331 5 0.900086 0.694556 0.2055301 7.1103e-12 0.724324 hypermethylated 2.2220e-10 1 hypermethylated 4.2640e-03 0.39045 weaklyHypermeth 9.4756e-02 1 weaklyHypermeth 0.169293 9.7235e-02 lowCoverage 1.0000e+00 lowCoverage 0.885115 0.749474 0.1349130 5 0.900086 0.784698 0.11538792 3.1601e-09 0.9994909 weaklyHypermeth 2.6334e-07 1.00000 weaklyHypermeth 1.6946e-05 0.9997653 weaklyHypermeth 1.6946e-03 1.0000 weaklyHypermeth 0.1108528 2.1053e-01 lowCoverage 1.00000000 lowCoverage 0.884984 0.6424332 0.2443925 5 0.892922 0.694556 0.198366 2.4074e-06 0.642579 hypermethylated 5.4714e-05 1 hypermethylated 3.6735e-02 0.459459 weaklyHypermeth 6.0222e-01 1 insignificant 0.14891593 1.5304e-01 lowCoverage 1.0000e+00 lowCoverage 0.884984 0.749474 0.1302533 5 0.892922 0.784698 0.1082239 1.2737e-04 0.9994540 weaklyHypermeth 5.5007e-03 1 weaklyHypermeth 2.0362e-03 0.99968 weaklyHypermeth 1.3574e-01 1 insignificant 0.0904758 3.3046e-01 lowCoverage 1.0000000 lowCoverage 0.6424332 0.749474 -0.12477260 5 0.694556 0.784698 -0.0901421 0.499459 1.1564e-01 insignificant 1 1.0000e+00 insignificant 0.263845 7.4583e-01 insignificant 1 1.0000e+00 insignificant -0.058440 0.61165610 lowCoverage 1.000000 lowCoverage chr14 75616138 75617138 128482 C14orf179 ENSG00000119650 0.89568 291 5 0.7817065 154 5 0.832222 94 5 0.9246521 290 5 0.846667 35 3 0.930368 281 5 0.911111 36 3 0.8135377 171 5 0.8891638 113 5 0.93515 140 5 0.876646 213 5 0.642857 25 3 0.8869644 156 5 0.89203 125 5 0.8646486 171 5 0.8400000 15 1 0.800000 7 0 0.872840 338 5 0.925476 165 5 0.852988 175 5 0.383333 16 0 0.742836 121 5 0.930278 92 5 0.85620 66 4 0.921228 78 5 0.944509 239 5 0.89476 81 5 0.76538 52 5 0.91714 194 5 0.9264083 244 5 0.907470 159 5 0.8618297 209 5 0.5233790 172 5 0.4847826 103 5 0.49057 105 2 0.950000 16 0 0.579444 75 5 0.899879 190 5 0.556751 126 5 0.7473664 247 5 0.788385 197 5 0.7570076 146 5 0.8726107 223 5 0.894739 0.784110 0.8401540 0.928718 0.8716172 0.938480 0.898790 0.8257722 0.8976135 0.93598 0.877516 0.697313 0.8854875 0.88906 0.8771837 0.8732673 0.841584 0.8695407 0.927110 0.860310 0.367162 0.736067 0.941309 0.86745 0.923015 0.9479354 0.8961608 0.73286 0.92071 0.9268226 0.9071464 0.8621558 0.5165928 0.4706199 0.595160 0.943069 0.563418 0.8982181 0.5448152 0.735560 0.780146 0.7695301 0.8658075 0 0.884808 0.884591 -0.00251078 5 0.880103 0.885792 -0.0056890 0.652987 0.25127282 insignificant 1 1.00000 insignificant 0.616999 0.51344002 insignificant 1 1.00000 insignificant 0.0231205 0.6359744 lowCoverage 1.0000 lowCoverage 0.884808 0.6354009 0.2408836 5 0.880103 0.633467 0.2466361 8.7810e-13 0.556213 hypermethylated 3.3773e-11 1 hypermethylated 1.3582e-03 0.24033 weaklyHypermeth 3.3956e-02 1 weaklyHypermeth 0.206060 6.3510e-02 lowCoverage 1.0000e+00 lowCoverage 0.884808 0.747604 0.1350305 5 0.880103 0.759820 0.12028368 1.2457e-09 0.9996922 weaklyHypermeth 1.1324e-07 1.00000 weaklyHypermeth 1.0393e-05 0.9991907 weaklyHypermeth 1.1548e-03 1.0000 weaklyHypermeth 0.1163109 8.7315e-02 lowCoverage 1.00000000 lowCoverage 0.884591 0.6354009 0.2480316 5 0.885792 0.633467 0.252325 6.0175e-07 0.732182 hypermethylated 1.5044e-05 1 hypermethylated 1.5731e-02 0.524824 weaklyHypermeth 2.7598e-01 1 insignificant 0.18293953 9.9445e-02 lowCoverage 1.0000e+00 lowCoverage 0.884591 0.747604 0.1312532 5 0.885792 0.759820 0.1259726 5.7379e-05 0.9999637 weaklyHypermeth 3.3752e-03 1 weaklyHypermeth 9.0937e-04 0.99996 weaklyHypermeth 6.4955e-02 1 weaklyHypermeth 0.0931904 2.0491e-01 lowCoverage 1.0000000 lowCoverage 0.6354009 0.747604 -0.12906905 5 0.633467 0.759820 -0.1263524 0.519047 7.0130e-02 insignificant 1 1.0000e+00 insignificant 0.280356 6.0695e-01 insignificant 1 1.0000e+00 insignificant -0.089749 0.40079797 lowCoverage 1.000000 lowCoverage chr14 75634205 75635205 128485 C14orf179 ENSG00000119650 0.89931 49 5 0.8923077 84 5 0.796820 68 5 0.9128205 51 1 0.925000 42 5 0.590164 69 1 0.863333 78 5 0.8833333 66 5 0.8581197 49 5 0.94286 59 4 0.857616 111 5 0.888889 38 4 0.9333333 46 5 0.78571 35 5 0.8188235 83 5 0.7500000 8 0 NA 0 0 0.970000 28 1 1.000000 27 1 0.692857 36 1 0.800000 30 5 0.933333 37 4 0.920000 39 5 1.00000 25 4 0.906734 139 5 0.909421 131 5 0.66597 57 5 0.78667 28 5 0.82558 52 1 0.9077546 148 5 0.915632 176 5 0.4933333 31 1 0.6634461 96 5 0.7783333 94 5 0.82692 132 5 0.866667 28 4 0.896081 81 6 0.962991 144 5 0.888172 46 1 0.7629630 38 1 0.700741 47 5 0.8888889 18 1 0.8592593 63 5 0.899060 0.902098 0.9548197 0.911422 0.9318182 0.622951 0.866667 0.8939394 0.8570319 0.94805 0.862539 0.868687 0.9090909 0.94805 0.8171123 0.7943160 NA 0.9590909 NA 0.717532 0.800000 0.939394 0.921212 1.00000 0.901745 0.9091987 0.8104259 0.78788 0.98732 0.9064003 0.9185998 0.4436364 0.8028107 0.7772727 0.993007 0.878788 0.919045 0.9615712 0.8778104 0.767677 0.701010 NA 0.8585859 0 0.895813 0.897982 -0.00284671 5 0.795874 0.857802 -0.0619280 0.777184 0.27402865 insignificant 1 1.00000 insignificant 0.777031 0.60950397 insignificant 1 1.00000 insignificant 0.0171559 0.7159595 lowCoverage 1.0000 lowCoverage 0.895813 0.8956522 -0.0048697 5 0.795874 0.842904 -0.0470297 7.9837e-01 0.495101 insignificant 1.0000e+00 1 insignificant 6.1796e-01 0.73127 insignificant 1.0000e+00 1 insignificant 0.023451 6.3883e-01 lowCoverage 1.0000e+00 lowCoverage 0.897461 0.806604 0.0973820 1 0.888383 0.812857 0.07552537 7.5396e-05 0.5240327 lowCoverage 3.2781e-03 1.00000 lowCoverage 1.0140e-02 0.4742063 lowCoverage 4.2250e-01 1.0000 lowCoverage 0.0358531 4.4184e-01 lowCoverage 1.00000000 lowCoverage 0.897982 0.8956522 -0.0021671 5 0.857802 0.842904 0.014898 5.5130e-01 0.676747 insignificant 1.0000e+00 1 insignificant 5.4362e-01 0.837003 insignificant 1.0000e+00 1 insignificant 0.00629507 9.1595e-01 lowCoverage 1.0000e+00 lowCoverage 0.898763 0.806604 0.0964305 1 0.896029 0.812857 0.0831722 9.3518e-05 0.6705515 lowCoverage 4.6759e-03 1 lowCoverage 5.3594e-03 0.50262 lowCoverage 2.9774e-01 1 lowCoverage 0.0186972 7.4067e-01 lowCoverage 1.0000000 lowCoverage 0.8996479 0.806604 0.10044283 1 0.897199 0.812857 0.0843419 0.015535 5.4958e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.050892 3.7118e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.012402 0.83169627 lowCoverage 1.000000 lowCoverage chr14 76454501 76455501 128554 ENSG00000210304 0.42308 52 1 0.4447092 175 6 0.341892 182 6 0.3707483 96 4 0.532692 98 5 0.623645 152 6 0.450000 120 5 0.3070689 162 5 0.2441340 152 5 0.61637 120 4 0.555456 149 5 0.246809 61 1 0.3420389 113 2 0.14848 81 4 0.3731935 177 4 0.3087719 64 1 0.866265 88 1 0.404051 78 1 0.501873 92 1 0.543210 120 6 0.226984 48 5 0.103931 77 5 0.494444 79 6 0.45256 122 6 0.668902 67 3 0.521394 212 6 0.32546 165 5 0.15351 84 5 0.46212 91 1 0.3255584 240 5 0.311058 176 6 0.5647831 124 6 0.0526826 180 5 0.0000000 44 1 0.11988 101 5 0.000000 19 1 0.077110 171 6 0.068027 157 6 0.477591 73 3 0.3561905 89 3 0.565189 75 2 0.1847826 56 1 0.3515306 73 3 0.478675 0.420845 0.2462472 0.405233 0.2580731 0.573605 0.330363 0.4007923 0.3256591 0.43717 0.451718 0.242206 0.1890034 0.37455 0.3581666 0.2257252 0.827448 0.3619772 0.356518 0.399340 0.498444 0.101568 0.502063 0.28914 0.492695 0.4597289 0.3162850 0.18410 0.41122 0.3193380 0.4045487 0.4663624 0.0092252 0.0000000 0.026055 0.000000 0.033369 0.0165017 0.2185169 0.074092 0.233015 0.1447482 0.2634118 1 0.391081 0.365722 0.02433961 5 0.448763 0.400810 0.0479527 0.143201 0.96585589 insignificant 1 1.00000 insignificant 0.225584 0.88501664 insignificant 1 1.00000 insignificant 0.0479991 0.4437978 lowCoverage 1.0000 lowCoverage 0.391081 0.0446429 0.3557189 5 0.448763 0.092027 0.3567364 2.9863e-17 1.000000 hypermethylated 2.4886e-15 1 hypermethylated 9.3963e-11 1.00000 hypermethylated 1.5660e-08 1 hypermethylated 0.379274 2.4341e-09 lowCoverage 8.1135e-07 lowCoverage 0.391081 0.245179 0.1783751 2 0.448763 0.349279 0.09948431 3.4318e-03 0.9114353 lowCoverage 1.0724e-01 1.00000 lowCoverage 5.9934e-03 0.8345377 lowCoverage 3.2062e-01 1.0000 lowCoverage 0.0451678 5.6177e-01 lowCoverage 1.00000000 lowCoverage 0.365722 0.0446429 0.3193559 5 0.400810 0.092027 0.308784 1.3794e-15 1.000000 hypermethylated 9.8529e-14 1 hypermethylated 1.9714e-09 1.000000 hypermethylated 3.9427e-07 1 hypermethylated 0.33127502 2.2868e-05 lowCoverage 1.6334e-03 lowCoverage 0.366330 0.248634 0.1584541 2 0.480567 0.444495 0.0360721 1.0125e-01 0.9686139 lowCoverage 1.0000e+00 1 lowCoverage 3.1083e-01 0.99240 lowCoverage 1.0000e+00 1 lowCoverage -0.0028313 9.7298e-01 lowCoverage 1.0000000 lowCoverage 0.0446429 0.245179 -0.19589539 2 0.092027 0.349279 -0.2572521 1.000000 4.7743e-08 lowCoverage 1 6.8204e-06 lowCoverage 0.999906 4.5913e-05 lowCoverage 1 7.6522e-03 lowCoverage -0.334106 0.00497526 lowCoverage 0.196629 lowCoverage chr14 76483297 76484297 128556 ENSG00000210304 0.11336 379 9 0.0083333 207 9 0.030934 431 10 0.0050505 185 9 0.040741 193 9 0.045137 378 10 0.017358 411 9 0.0071429 208 10 0.0061553 312 9 0.00000 225 9 0.017993 346 10 0.066566 419 9 0.0094415 431 9 NA 0 0 0.0051417 404 9 0.0066667 333 9 0.028463 276 9 0.016813 170 9 0.020341 195 9 0.024384 483 10 0.012222 92 8 0.149008 72 8 0.024815 384 10 0.00000 128 8 0.032407 64 8 0.038095 350 9 0.06875 156 10 0.11868 88 9 0.10000 200 9 0.0081717 456 9 0.012929 364 10 0.0068804 514 10 0.0052632 183 9 0.0052632 198 9 0.11111 114 8 0.100000 153 9 0.016667 84 7 0.051639 280 9 0.103226 331 9 0.0086221 383 9 0.011111 122 9 0.0046396 497 9 0.0068966 212 9 0.016507 0.007897 0.0096117 0.005781 0.0097903 0.022524 0.018666 0.0026719 0.0069665 0.00000 0.020483 0.018394 0.0079091 NA 0.0052686 0.0063175 0.028371 0.0092696 0.020372 0.014574 0.018509 0.058183 0.010677 0.00000 0.028574 0.0045125 0.0063903 0.08070 0.00000 0.0093966 0.0021310 0.0080893 0.0091876 0.0069563 0.000000 0.000000 0.018703 0.0028617 0.0032982 0.010153 0.013217 0.0058752 0.0080832 8 0.014701 0.016039 -0.00021495 9 0.026439 0.039623 -0.0131845 0.224382 0.75867908 insignificant 1 1.00000 insignificant 0.216689 0.73691733 insignificant 1 1.00000 insignificant -0.0229252 0.1641240 insignificant 1.0000 insignificant 0.014701 0.0088933 0.0060055 9 0.026439 0.028097 -0.0016576 3.6703e-02 0.959851 weaklyHypermeth 4.8938e-01 1 insignificant 2.6850e-02 0.99495 weaklyHypermeth 4.4016e-01 1 insignificant -0.023586 2.9147e-01 insignificant 1.0000e+00 insignificant 0.014701 0.007767 0.0058468 9 0.026439 0.026053 0.00038552 1.5087e-01 0.7474445 insignificant 1.0000e+00 1.00000 insignificant 1.7219e-01 0.7742360 insignificant 1.0000e+00 1.0000 insignificant -0.0021613 9.1868e-01 insignificant 1.00000000 insignificant 0.016039 0.0088933 0.0057656 9 0.039623 0.028097 0.011527 2.8183e-01 0.994418 insignificant 1.0000e+00 1 insignificant 2.0377e-01 0.999413 insignificant 1.0000e+00 1 insignificant -0.00066101 9.7870e-01 insignificant 1.0000e+00 insignificant 0.016039 0.007767 0.0046363 9 0.039623 0.026053 0.0135700 4.4410e-01 0.7482276 insignificant 1.0000e+00 1 insignificant 5.8279e-01 0.67725 insignificant 1.0000e+00 1 insignificant 0.0207639 4.0840e-01 insignificant 1.0000000 insignificant 0.0088933 0.007767 -0.00087454 9 0.028097 0.026053 0.0020432 0.981571 5.4768e-01 insignificant 1 1.0000e+00 insignificant 0.999213 4.8045e-01 insignificant 1 1.0000e+00 insignificant 0.021425 0.45225229 insignificant 1.000000 insignificant chr14 77897165 77898165 128660 NRXN3 ENSG00000021645 0.79056 360 10 0.5934317 138 6 0.673438 189 10 0.6649892 192 10 0.617836 73 10 0.791195 231 10 0.530043 98 10 0.7513763 138 6 0.4251515 52 5 0.67027 113 9 0.751924 296 10 0.664530 67 8 0.7653298 97 9 0.90000 52 6 0.7680031 127 6 0.5646429 67 9 0.773611 62 6 0.836335 216 10 0.699011 172 10 0.762616 248 10 0.714167 41 2 0.708452 110 10 0.745668 146 10 0.83889 51 6 0.726290 87 10 0.725397 206 10 0.81815 57 2 0.95937 19 2 0.70108 108 9 0.7146320 174 10 0.735216 145 10 0.7880967 312 10 0.5852121 113 9 0.7585165 103 10 0.69099 183 10 0.735000 45 5 0.630794 93 8 0.633565 165 10 0.835574 215 10 0.8179843 367 10 0.779255 226 10 0.7552652 305 10 0.7948572 254 10 0.838194 0.638812 0.7011358 0.803730 0.7198801 0.825252 0.604268 0.8057410 0.5542104 0.69565 0.790974 0.752467 0.7997698 0.82520 0.8399389 0.6823941 0.831030 0.8577035 0.757672 0.804751 0.739322 0.764280 0.795314 0.84070 0.806662 0.7466720 0.8299384 0.84060 0.76020 0.7874927 0.7694341 0.7818977 0.6581879 0.7843890 0.738339 0.709818 0.695079 0.7461121 0.8586920 0.824999 0.809271 0.7866396 0.8170714 1 0.751673 0.763736 -0.00526807 10 0.710787 0.754363 -0.0435765 0.727451 0.21788390 insignificant 1 1.00000 insignificant 0.922843 0.01300404 weaklyHypometh 1 1.00000 insignificant -0.0649034 0.0621581 insignificant 1.0000 insignificant 0.751759 0.7122507 0.0449060 10 0.703657 0.626540 0.0771167 2.4846e-02 0.970341 weaklyHypermeth 3.5495e-01 1 insignificant 1.4452e-01 0.95764 insignificant 1.0000e+00 1 insignificant 0.027368 4.7495e-01 insignificant 1.0000e+00 insignificant 0.751842 0.787857 -0.0549844 10 0.728352 0.823287 -0.09493493 9.9907e-01 0.0085420 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9990e-01 0.0018079 weaklyHypometh 1.0000e+00 0.9808 insignificant -0.0968723 2.9083e-03 weaklyHypometh 0.29083439 insignificant 0.763122 0.7122507 0.0508946 10 0.755156 0.626540 0.128616 4.6109e-03 0.992343 weaklyHypermeth 7.6849e-02 1 weaklyHypermeth 3.0086e-04 0.997635 weaklyHypermeth 1.0374e-02 1 weaklyHypermeth 0.09227180 2.2885e-02 weaklyHypermeth 4.4011e-01 insignificant 0.762759 0.787857 -0.0474420 10 0.733893 0.823287 -0.0893937 9.8863e-01 0.0020028 weaklyHypometh 1.0000e+00 1 insignificant 9.8375e-01 0.12085 insignificant 1.0000e+00 1 insignificant -0.0319689 2.3892e-01 insignificant 1.0000000 insignificant 0.7122507 0.787701 -0.09621869 10 0.626540 0.807222 -0.1806821 0.999999 6.3248e-04 weaklyHypometh 1 2.2589e-02 weaklyHypometh 1.000000 2.9471e-04 weaklyHypometh 1 3.6839e-02 weaklyHypometh -0.124241 0.00449828 weaklyHypometh 0.192708 insignificant chr14 83553843 83554843 129179 ENSG00000210408 0.845648 151 7 0.945330 517 7 0.713534 107 5 0.954997 78 7 0.891565 184 7 0.96992 230 7 0.898535 291 7 0.97202 182 7 0.844728 136 7 0.98980 76 5 0.938030 483 7 0.86054 80 7 0.933333 98 7 0.94943 61 7 0.970714 136 7 1.000000 84 7 NA 0 0 1.000000 5 0 0.974026 128 7 0.963249 211 7 0.88039 51 7 0.96429 30 2 0.90330 100 7 0.94282 219 7 0.92857 22 0 0.966700 454 7 0.954003 98 5 0.68571 27 5 0.991071 85 5 0.976308 491 7 0.937768 451 7 0.94386 277 7 0.68998 217 7 0.571846 101 5 1.00000 8 0 NA 0 0 0.62502 195 7 0.57906 326 7 0.96484 638 7 0.9333208 640 7 0.946457 332 7 0.928571 12 0 0.885582 341 7 0.847025 0.950405 0.779218 0.961565 0.904513 0.96285 0.916354 0.972304 0.887801 0.987395 0.95153 0.91352 0.951961 0.95224 0.965049 1.000000 NA 0.978841 0.967914 0.965650 0.85592 0.955882 0.93774 0.93625 0.96324 0.970612 0.944910 0.81765 0.988971 0.980509 0.94789 0.95467 0.74964 0.633686 0.84289 NA 0.66244 0.69002 0.9716888 0.9408696 0.951112 0.91176 0.884852 0 0.938233 0.956182 -0.0185558 7 0.93002 0.951514 -0.0214962 0.99674 6.1384e-02 insignificant 1 1.00000000 insignificant 0.907291 0.4312680 insignificant 1 1 insignificant 0.0042282 0.883234 insignificant 1 insignificant 0.938233 0.71901 0.223709 7 0.93002 0.61674 0.313280 5.2955e-36 1.0000e+00 hypermethylated 5.2955e-33 1.0000e+00 hypermethylated 4.1715e-10 1.0000e+00 hypermethylated 2.0858e-07 1.0000000 hypermethylated 0.233946 4.0779e-02 lowCoverage 1.0000000 lowCoverage 0.938233 0.939379 -0.0035511 7 0.93002 0.937435 -0.0074172 0.5056293 4.7777e-01 insignificant 1.00000 1.0000e+00 insignificant 0.413797 8.2032e-01 insignificant 1.00000 1.000000 insignificant -0.0046266 0.82791999 insignificant 1.000000 insignificant 0.956182 0.71901 0.240670 7 0.951514 0.61674 0.334777 5.2335e-31 1.0000e+00 hypermethylated 5.2335e-28 1.00000000 hypermethylated 9.3580e-08 1.0000e+00 hypermethylated 3.1193e-05 1.000000 hypermethylated 0.229717 0.042005 lowCoverage 1.00000 lowCoverage 0.956182 0.939379 0.014866 7 0.951514 0.937435 0.014079 0.0906866 0.95978525 insignificant 1.00000 1.00000 insignificant 0.142322 0.9728809 insignificant 1 1 insignificant -0.0088548 0.7452035 insignificant 1 insignificant 0.71901 0.939379 -0.22529 7 0.61674 0.937435 -0.320698 1.00000000 4.9802e-17 hypomethylated 1.000000 4.9802e-14 hypomethylated 0.9999999 9.4098e-06 hypomethylated 1.00000 0.0037701 hypomethylated -0.238572 0.03892395 lowCoverage 1.000000 lowCoverage chr14 89113433 89114433 129567 FOXN3 ENSG00000053254 0.716667 41 3 0.515417 234 4 0.630000 54 4 0.520833 41 3 0.575238 104 4 0.72141 145 5 0.598917 110 4 0.67508 60 3 0.538644 87 3 0.69743 50 4 0.653544 151 5 0.56893 57 4 0.431774 44 3 0.66154 34 2 0.680000 72 3 0.410526 41 2 0.250000 4 0 0.760000 27 2 0.540307 61 3 0.623831 115 5 0.82643 26 3 0.37143 17 2 0.76808 81 3 0.73778 64 5 0.61905 15 2 0.698720 152 5 0.567500 39 2 0.74526 45 3 0.682857 55 3 0.710622 205 5 0.706816 168 5 0.72524 109 5 0.78462 90 4 0.800000 34 3 0.80000 236 2 0.66667 3 0 0.79697 157 5 0.78080 158 5 0.75404 58 3 0.7636364 43 5 0.780000 31 3 0.666667 11 1 0.541667 35 2 0.692708 0.502475 0.590625 0.683594 0.612500 0.70308 0.627439 0.601731 0.594950 0.633955 0.69249 0.56406 0.566703 0.57212 0.612500 0.538816 0.651402 0.787500 0.652335 0.640593 0.80781 0.375000 0.76612 0.66944 0.81250 0.697201 0.512240 0.71620 0.618750 0.679807 0.73606 0.74792 0.87500 0.875000 0.87500 0.87500 0.86837 0.83300 0.7744565 0.7954545 0.831250 0.87500 0.710938 2 0.633812 0.734631 -0.0961597 5 0.59980 0.708025 -0.1082254 1.00000 6.7203e-07 weaklyHypometh 1 0.00067203 weaklyHypometh 0.999841 0.0013912 weaklyHypometh 1 1 insignificant -0.0914778 0.047411 lowCoverage 1 lowCoverage 0.633812 0.93363 -0.252910 5 0.59980 0.78920 -0.189399 9.0705e-01 9.7471e-16 hypomethylated 1.0000e+00 9.7471e-13 hypomethylated 8.9375e-01 1.7892e-06 hypomethylated 1.0000e+00 0.0017892 hypomethylated -0.183004 3.4762e-05 lowCoverage 0.0049661 lowCoverage 0.633812 0.730337 -0.1519800 3 0.59980 0.754723 -0.1549237 0.9271202 2.8752e-08 lowCoverage 1.00000 2.8752e-05 lowCoverage 0.917342 3.1151e-05 lowCoverage 1.00000 0.031151 lowCoverage -0.1126973 0.06598462 lowCoverage 1.000000 lowCoverage 0.734631 0.93363 -0.160021 5 0.708025 0.78920 -0.081173 5.4787e-01 8.5945e-07 weaklyHypometh 1.0000e+00 0.00085945 weaklyHypometh 5.9068e-01 6.8484e-05 weaklyHypometh 1.0000e+00 0.068484 weaklyHypometh -0.091527 0.036430 lowCoverage 1.00000 lowCoverage 0.734631 0.730337 -0.059737 3 0.708025 0.754723 -0.046698 0.6476988 0.00704328 lowCoverage 1.00000 1.00000 lowCoverage 0.716204 0.0032153 lowCoverage 1 1 lowCoverage -0.0212195 0.7134284 lowCoverage 1 lowCoverage 0.93363 0.730337 0.06969 3 0.78920 0.754723 0.034475 0.00462156 9.5020e-01 lowCoverage 0.770259 1.0000e+00 lowCoverage 0.1873510 9.9101e-01 lowCoverage 1.00000 1.0000000 lowCoverage 0.070307 0.20523678 lowCoverage 1.000000 lowCoverage chr14 93273492 93274492 129669 ENSG00000202306 0.929981 107 6 0.828604 95 6 0.637260 84 6 0.897838 102 6 0.888889 19 2 0.90609 151 6 0.737554 34 2 0.86859 117 6 0.802083 40 2 0.97353 44 3 0.894078 131 6 0.82576 23 1 0.932937 128 6 0.89367 30 2 0.921265 74 6 0.903846 26 2 0.888889 8 0 0.846356 168 6 0.976923 84 6 0.921981 103 6 0.93869 57 6 0.82791 102 6 0.94394 72 6 0.89899 60 6 0.90179 86 6 0.958745 131 6 0.857682 95 6 0.70000 34 3 0.876895 99 6 0.913545 136 6 0.949157 103 6 0.91142 134 6 0.71111 67 4 0.747835 94 6 0.33333 6 0 0.70602 39 4 0.89448 65 4 0.72572 123 6 0.74777 67 6 0.8702632 105 6 0.954630 70 6 0.845860 68 6 0.860791 97 6 0.918923 0.852159 0.757111 0.956685 0.849429 0.94991 0.804090 0.884035 0.886525 0.934919 0.91969 0.57834 0.928217 0.89189 0.869609 0.842012 0.916254 0.818793 0.942717 0.929931 0.93891 0.844043 0.94565 0.88407 0.84650 0.932883 0.745203 0.93376 0.849320 0.927009 0.93570 0.90902 0.83245 0.909505 0.50575 0.61939 0.80663 0.83364 0.8127231 0.9069499 0.991489 0.85177 0.906983 2 0.881378 0.898917 -0.0186976 6 0.87503 0.904152 -0.0291228 0.95843 4.4147e-02 weaklyHypometh 1 1.00000000 insignificant 0.828985 0.1065578 insignificant 1 1 insignificant -0.0160910 0.559497 lowCoverage 1 lowCoverage 0.881378 0.75064 0.119395 6 0.87503 0.72919 0.145841 7.7932e-06 6.4137e-01 weaklyHypermeth 2.2266e-04 1.0000e+00 weaklyHypermeth 3.6687e-02 9.0445e-01 weaklyHypermeth 8.5319e-01 1.0000000 insignificant 0.187389 5.7032e-02 lowCoverage 1.0000000 lowCoverage 0.881378 0.852580 0.0174145 6 0.87503 0.862144 0.0128854 0.3295642 6.3838e-01 insignificant 1.00000 1.0000e+00 insignificant 0.196869 7.5872e-01 insignificant 1.00000 1.000000 insignificant 0.0179428 0.64775911 lowCoverage 1.000000 lowCoverage 0.898106 0.74873 0.147913 6 0.774987 0.62502 0.149969 3.3449e-05 9.8850e-01 weaklyHypermeth 1.0136e-03 1.00000000 weaklyHypermeth 3.5833e-02 9.9877e-01 weaklyHypermeth 8.3332e-01 1.000000 insignificant 0.203480 0.043615 lowCoverage 1.00000 lowCoverage 0.898917 0.852580 0.045824 6 0.904152 0.862144 0.042008 0.0087431 0.78066296 weaklyHypermeth 0.62451 1.00000 insignificant 0.050719 0.6270928 insignificant 1 1 insignificant 0.0340338 0.4092601 insignificant 1 insignificant 0.75064 0.852580 -0.13367 6 0.72919 0.862144 -0.132955 0.55297062 1.7018e-02 weaklyHypometh 1.000000 4.3635e-01 insignificant 0.6519937 1.1074e-01 insignificant 1.00000 1.0000000 insignificant -0.169447 0.08215746 lowCoverage 1.000000 lowCoverage chr14 94967836 94968836 129703 CLMN ENSG00000165959 0.090097 202 5 0.092953 110 5 0.055898 126 5 0.057143 72 5 0.018182 64 5 0.10857 235 5 0.035952 172 5 0.10047 87 5 0.078375 104 5 0.11715 131 5 0.076718 157 5 0.11053 91 5 0.037167 148 5 NA 0 0 0.056196 155 5 0.055294 72 5 0.068382 114 5 0.062626 78 5 0.056527 141 5 0.019639 234 5 0.20389 88 5 0.03750 67 5 0.10187 98 5 0.12588 68 5 0.00000 59 5 0.074467 205 5 0.052051 73 5 0.11667 13 0 0.079962 133 5 0.040168 173 5 0.038004 160 5 0.16627 204 5 0.15473 83 5 0.090072 122 5 0.40000 39 3 0.21995 56 5 0.15357 24 3 0.61279 138 5 0.00625 197 5 0.0071429 209 5 0.022222 84 5 0.046094 236 5 0.052288 140 5 0.081906 0.088831 0.038356 0.029036 0.012934 0.10512 0.032758 0.071672 0.069151 0.098977 0.09620 0.07285 0.029531 NA 0.059202 0.056791 0.048676 0.044551 0.046623 0.016315 0.17214 0.028201 0.10543 0.15770 0.00000 0.057949 0.047994 0.11822 0.054138 0.027038 0.03701 0.17991 0.12323 0.053164 0.49187 0.24834 0.11868 0.59806 0.0044461 0.0036295 0.011292 0.03923 0.048276 4 0.064581 0.082774 -0.0177423 5 0.06974 0.085383 -0.0156426 0.32677 7.4673e-02 insignificant 1 1.00000000 insignificant 0.085014 0.1211312 insignificant 1 1 insignificant -0.0180858 0.341654 lowCoverage 1 lowCoverage 0.064581 0.31602 -0.248227 5 0.06974 0.32280 -0.253063 1.0000e+00 3.7474e-10 hypomethylated 1.0000e+00 1.8737e-07 hypomethylated 9.9341e-01 4.1618e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.203544 5.3244e-02 lowCoverage 1.0000000 lowCoverage 0.064581 0.023095 0.0413517 5 0.06974 0.026188 0.0435531 0.0032746 9.9939e-01 weaklyHypermeth 0.21831 1.0000e+00 insignificant 0.008173 9.9859e-01 weaklyHypermeth 0.90811 1.000000 insignificant 0.0415091 0.00706544 lowCoverage 0.799868 lowCoverage 0.082774 0.31602 -0.232320 5 0.085383 0.32280 -0.237420 9.9761e-01 4.5397e-06 hypomethylated 1.0000e+00 0.00226984 hypomethylated 8.5122e-01 7.5335e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.185458 0.070403 lowCoverage 1.00000 lowCoverage 0.082774 0.023095 0.059163 5 0.085383 0.026188 0.059196 0.0152423 0.99191562 weaklyHypermeth 0.95264 1.00000 insignificant 0.019349 0.9531528 weaklyHypermeth 1 1 insignificant 0.0595949 0.0083426 lowCoverage 1 lowCoverage 0.31602 0.023095 0.29080 5 0.32280 0.026188 0.296616 0.00017267 9.9999e-01 hypermethylated 0.086334 1.0000e+00 hypermethylated 0.0035086 9.9891e-01 weaklyHypermeth 0.87715 1.0000000 insignificant 0.245053 0.02873880 lowCoverage 0.957960 lowCoverage chr14 96970095 96971095 129835 VRK1 ENSG00000100749 0.816608 183 6 0.721587 112 6 0.642913 97 6 0.855833 136 6 0.760281 60 5 0.76553 192 6 0.733440 61 6 0.75546 90 5 0.828571 65 6 0.85657 64 6 0.865741 131 6 0.70833 34 4 0.749294 77 5 0.65079 19 3 0.890789 62 5 0.806746 30 2 0.875000 35 4 0.811260 136 6 0.714186 119 6 0.839490 132 6 0.68667 22 4 0.75455 49 5 0.84252 116 6 0.90278 31 4 0.66667 14 1 0.825203 118 6 0.879762 57 4 0.74643 27 3 0.762323 102 6 0.838894 101 6 0.833110 122 6 0.78457 185 6 0.76162 73 5 0.663290 70 6 0.76177 104 6 0.73932 47 4 0.60876 68 4 0.66519 113 6 0.86651 181 6 0.8580898 175 6 0.833842 138 6 0.904785 112 6 0.893448 136 6 0.861604 0.769026 0.673685 0.871067 0.765212 0.80900 0.784755 0.776368 0.860152 0.896032 0.88872 0.77120 0.828816 0.81478 0.881368 0.854210 0.853809 0.847784 0.741600 0.863507 0.81669 0.765673 0.83998 0.87600 0.71200 0.858978 0.854687 0.74231 0.798448 0.855812 0.84403 0.83092 0.78810 0.725014 0.77016 0.80157 0.77524 0.73279 0.9031398 0.9020322 0.856603 0.91217 0.923289 3 0.805450 0.799788 0.0056135 6 0.81906 0.821640 -0.0025806 0.50358 5.0677e-01 insignificant 1 1.00000000 insignificant 0.553059 0.2188526 insignificant 1 1 insignificant -0.0112010 0.678597 lowCoverage 1 lowCoverage 0.805237 0.75158 0.055276 6 0.78890 0.71788 0.071025 5.1716e-03 9.9861e-01 weaklyHypermeth 1.1243e-01 1.0000e+00 insignificant 2.9005e-02 9.9955e-01 weaklyHypermeth 7.0744e-01 1.0000000 insignificant 0.082432 2.3684e-02 weaklyHypermeth 0.6965859 insignificant 0.805237 0.892183 -0.0712809 6 0.78890 0.870479 -0.0815772 0.9998711 4.7459e-05 weaklyHypometh 1.00000 2.3729e-02 weaklyHypometh 0.999877 6.8779e-04 weaklyHypometh 1.00000 0.343897 insignificant -0.0889143 0.00043748 weaklyHypometh 0.087496 weaklyHypometh 0.799576 0.75158 0.052099 6 0.791913 0.71788 0.074035 1.1955e-02 9.2431e-01 weaklyHypermeth 2.3442e-01 1.00000000 insignificant 2.0748e-02 9.6660e-01 weaklyHypermeth 5.1870e-01 1.000000 insignificant 0.093633 0.016364 lowCoverage 0.58443 lowCoverage 0.799576 0.892183 -0.077034 6 0.791913 0.870479 -0.078567 0.9999843 0.00039389 weaklyHypometh 1.00000 0.39389 insignificant 0.997250 0.0151840 weaklyHypometh 1 1 insignificant -0.0777133 0.0064915 lowCoverage 1 lowCoverage 0.75158 0.892183 -0.12844 6 0.71788 0.870479 -0.152602 0.99999634 7.6374e-05 weaklyHypometh 1.000000 4.4926e-03 weaklyHypometh 0.9999997 1.1320e-04 weaklyHypometh 1.00000 0.0154669 weaklyHypometh -0.171347 0.00051809 weaklyHypometh 0.086348 weaklyHypometh chr14 98443797 98444797 130016 C14orf177 ENSG00000176605 0.549141 71 5 0.713194 80 7 0.71697 82 5 0.952381 16 1 0.795918 48 3 0.77570 99 5 0.462662 36 3 0.83847 140 7 0.7278912 42 3 0.757853 61 5 0.73415 176 7 0.428571 12 0 0.776393 107 7 0.730000 22 2 0.554630 61 5 0.897436 25 3 0.32381 24 3 0.50481 61 3 0.876211 92 5 0.58755 82 5 0.92961 91 7 0.106667 21 3 0.67111 66 5 0.47222 22 2 0.816667 20 1 0.81470 172 7 0.701332 94 7 0.66667 10 0 0.829221 118 5 0.793971 221 7 0.871809 180 7 0.87613 152 7 0.922880 80 5 0.908601 102 7 0.94463 71 3 0.900000 9 0 0.93413 64 7 0.83160 234 7 0.141905 49 5 0.25546 109 5 0.53982 37 3 0.24500 50 3 0.56861 55 5 0.77776 0.693386 0.51295 0.798450 0.785382 0.73183 0.424419 0.757117 0.612957 0.527589 0.70646 0.37209 0.7325018 0.656925 0.51109 0.735994 0.222796 0.51219 0.84999 0.464537 0.89813 0.229457 0.57674 0.456234 0.562016 0.783310 0.710030 0.585232 0.757475 0.839100 0.866122 0.78495 0.906145 0.910913 NA 0.927462 0.897545 0.909980 0.133666 0.37757 0.41110 0.18953 0.311710 1 0.67689 0.784919 -0.11195923 5 0.71560 0.80022 -0.0846204 0.96818437 0.00058520 weaklyHypometh 1.00000 0.19507 insignificant 0.589115 0.12249923 insignificant 1 1.000000 insignificant -0.0273216 0.722540 lowCoverage 1 lowCoverage 0.67689 0.908929 -0.2317656 5 0.71560 0.89779 -0.1821893 1.0000e+00 1.6986e-06 hypomethylated 1.0000e+00 5.6620e-04 hypomethylated 9.9995e-01 3.6316e-05 hypomethylated 1.0000e+00 0.036316 hypomethylated -0.2217865 1.6568e-05 lowCoverage 1.2744e-03 lowCoverage 0.67689 0.32000 0.3375321 5 0.71560 0.45387 0.2617297 5.5365e-10 9.9997e-01 hypermethylated 1.1073e-07 1.0000000 hypermethylated 1.8036e-06 1.0000e+00 hypermethylated 3.6072e-04 1.000000 hypermethylated 0.3350279 1.2936e-02 lowCoverage 0.7609501 lowCoverage 0.784919 0.908929 -0.129204 7 0.80022 0.89779 -0.09756893 9.9838e-01 1.3442e-03 weaklyHypometh 1.0000e+00 2.6885e-01 insignificant 9.8767e-01 0.00011537 weaklyHypometh 1.0000e+00 0.057683 weaklyHypometh -0.194465 1.3727e-02 lowCoverage 4.0374e-01 lowCoverage 0.78492 0.32000 0.4609447 5 0.80022 0.45387 0.3463501 1.8856e-15 9.9995e-01 hypermethylated 9.4280e-13 1.000000 hypermethylated 1.9583e-05 0.99999928 hypermethylated 4.4633e-03 1.00000 hypermethylated 0.3623495 0.0085318 lowCoverage 0.710981 lowCoverage 0.908929 0.32000 0.5905134 5 0.89779 0.45387 0.44391904 1.8371e-15 1.0000e+00 hypermethylated 1.8371e-12 1.0000e+00 hypermethylated 1.1749e-06 1.0000e+00 hypermethylated 0.0011749 1.0000e+00 hypermethylated 0.5568144 2.4256e-03 lowCoverage 0.12127759 lowCoverage chr14 98669065 98670065 130038 ENSG00000220591 0.898413 248 5 0.767879 121 5 0.85276 116 5 0.877185 223 5 0.794466 94 4 0.89242 213 5 0.801667 81 5 0.84156 129 5 0.7819048 64 5 0.893333 109 5 0.88551 147 5 0.829545 52 5 0.791445 95 5 0.800000 34 4 0.871429 61 4 0.376190 42 5 NA 0 0 0.80248 306 5 0.931713 229 5 0.87851 211 5 0.87468 52 5 0.778182 49 5 0.87952 65 5 0.54663 61 5 0.975000 57 5 0.85265 182 5 0.712109 96 5 0.92000 44 5 0.878159 159 5 0.898795 228 5 0.904979 264 5 0.90198 169 5 0.190692 167 5 0.321121 258 5 0.53438 323 4 1.000000 7 1 0.34098 155 5 0.54188 315 5 0.937930 207 5 0.69000 179 5 0.81740 172 5 0.82638 193 5 0.87389 141 5 0.90722 0.789313 0.84346 0.880980 0.824905 0.90794 0.815074 0.880310 0.804458 0.920000 0.89084 0.82225 0.8128043 0.833333 0.91842 0.226050 NA 0.81657 0.94566 0.881565 0.88893 0.772193 0.89658 0.608456 0.987132 0.877373 0.769672 0.958824 0.892804 0.930021 0.920665 0.90941 0.202291 0.356697 0.489059 NA 0.439395 0.610603 0.949801 0.85020 0.83297 0.83954 0.892976 4 0.85453 0.877107 -0.01727084 5 0.85473 0.86978 -0.0150508 0.87959342 0.28547824 insignificant 1.00000 1.00000 insignificant 0.997285 0.04255396 weaklyHypometh 1 1.000000 insignificant -0.0241665 0.578056 lowCoverage 1 lowCoverage 0.85476 0.432653 0.4358244 5 0.87894 0.34710 0.5318400 6.6569e-21 1.0000e+00 hypermethylated 3.9159e-19 1.0000e+00 hypermethylated 7.9682e-06 1.0000e+00 hypermethylated 3.7944e-04 1.000000 hypermethylated 0.3312152 3.4911e-02 lowCoverage 7.9344e-01 lowCoverage 0.85453 0.84063 -0.0042944 5 0.85473 0.85933 -0.0046059 7.8102e-01 5.5046e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5125e-01 2.8541e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0097292 8.4736e-01 lowCoverage 1.0000000 lowCoverage 0.877107 0.433007 0.442829 5 0.86978 0.41652 0.45325875 2.1887e-16 1.0000e+00 hypermethylated 1.2159e-14 1.0000e+00 hypermethylated 1.1602e-06 0.99999999 hypermethylated 6.4269e-05 1.000000 hypermethylated 0.355382 2.6798e-02 lowCoverage 6.3806e-01 lowCoverage 0.87711 0.84063 0.0112481 5 0.86978 0.85933 0.0104449 5.4483e-01 8.0880e-01 insignificant 1.0000e+00 1.000000 insignificant 3.2730e-01 0.95712274 insignificant 1.0000e+00 1.00000 insignificant 0.0144373 0.7899702 insignificant 1.000000 insignificant 0.433007 0.84063 -0.4447497 5 0.41652 0.85933 -0.44281387 1.0000e+00 5.8817e-09 hypomethylated 1.0000e+00 4.2012e-07 hypomethylated 1.0000e+00 1.6567e-04 hypomethylated 1.0000000 9.7453e-03 hypomethylated -0.3409444 3.1447e-02 lowCoverage 0.73132447 lowCoverage chr14 98669371 98670371 130039 ENSG00000220591 0.898413 248 5 0.767879 121 5 0.85276 116 5 0.877185 223 5 0.794466 94 4 0.89242 213 5 0.801667 81 5 0.84156 129 5 0.7819048 64 5 0.893333 109 5 0.88551 147 5 0.829545 52 5 0.791445 95 5 0.800000 34 4 0.871429 61 4 0.376190 42 5 NA 0 0 0.80248 306 5 0.931713 229 5 0.87851 211 5 0.87468 52 5 0.778182 49 5 0.87952 65 5 0.54663 61 5 0.975000 57 5 0.85265 182 5 0.712109 96 5 0.92000 44 5 0.878159 159 5 0.898795 228 5 0.904979 264 5 0.90198 169 5 0.190692 167 5 0.321121 258 5 0.53438 323 4 1.000000 7 1 0.34098 155 5 0.54188 315 5 0.937930 207 5 0.69000 179 5 0.81740 172 5 0.82638 193 5 0.87389 141 5 0.90722 0.789313 0.84346 0.880980 0.824905 0.90794 0.815074 0.880310 0.804458 0.920000 0.89084 0.82225 0.8128043 0.833333 0.91842 0.226050 NA 0.81657 0.94566 0.881565 0.88893 0.772193 0.89658 0.608456 0.987132 0.877373 0.769672 0.958824 0.892804 0.930021 0.920665 0.90941 0.202291 0.356697 0.489059 NA 0.439395 0.610603 0.949801 0.85020 0.83297 0.83954 0.892976 4 0.85453 0.877107 -0.01727084 5 0.85473 0.86978 -0.0150508 0.87959342 0.28547824 insignificant 1.00000 1.00000 insignificant 0.997285 0.04255396 weaklyHypometh 1 1.000000 insignificant -0.0241665 0.578056 lowCoverage 1 lowCoverage 0.85476 0.432653 0.4358244 5 0.87894 0.34710 0.5318400 6.6569e-21 1.0000e+00 hypermethylated 3.9159e-19 1.0000e+00 hypermethylated 7.9682e-06 1.0000e+00 hypermethylated 3.7944e-04 1.000000 hypermethylated 0.3312152 3.4911e-02 lowCoverage 7.9344e-01 lowCoverage 0.85453 0.84063 -0.0042944 5 0.85473 0.85933 -0.0046059 7.8102e-01 5.5046e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5125e-01 2.8541e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0097292 8.4736e-01 lowCoverage 1.0000000 lowCoverage 0.877107 0.433007 0.442829 5 0.86978 0.41652 0.45325875 2.1887e-16 1.0000e+00 hypermethylated 1.2159e-14 1.0000e+00 hypermethylated 1.1602e-06 0.99999999 hypermethylated 6.4269e-05 1.000000 hypermethylated 0.355382 2.6798e-02 lowCoverage 6.3806e-01 lowCoverage 0.87711 0.84063 0.0112481 5 0.86978 0.85933 0.0104449 5.4483e-01 8.0880e-01 insignificant 1.0000e+00 1.000000 insignificant 3.2730e-01 0.95712274 insignificant 1.0000e+00 1.00000 insignificant 0.0144373 0.7899702 insignificant 1.000000 insignificant 0.433007 0.84063 -0.4447497 5 0.41652 0.85933 -0.44281387 1.0000e+00 5.8817e-09 hypomethylated 1.0000e+00 4.2012e-07 hypomethylated 1.0000e+00 1.6567e-04 hypomethylated 1.0000000 9.7453e-03 hypomethylated -0.3409444 3.1447e-02 lowCoverage 0.73132447 lowCoverage chr14 98768000 98769000 130050 ENSG00000220591 0.351533 118 4 0.152004 119 6 0.18056 20 0 0.296899 150 7 0.466667 19 2 0.50432 91 7 0.555556 23 1 0.66667 21 2 0.2000000 11 0 0.300000 7 0 0.43203 138 6 1.000000 2 0 1.000000 2 0 0.000000 4 0 0.600000 5 0 NA 0 0 NA 0 0 0.38980 99 4 0.282222 35 4 0.52946 51 4 0.53061 19 2 0.500000 4 0 0.17634 42 5 0.23333 35 5 0.377345 50 6 0.42484 124 5 0.616667 25 4 0.57143 13 0 0.500000 18 0 0.258242 91 7 0.265046 104 5 0.40696 124 4 0.155159 104 5 0.261905 31 5 0.43046 106 5 0.158844 162 7 0.30097 32 3 0.25536 134 6 0.282189 170 7 0.27994 137 7 0.38446 148 6 0.54167 15 2 0.25860 118 7 0.62500 0.000000 0.16667 0.452381 0.833333 0.91667 0.666667 0.833333 0.500000 0.750000 0.61905 1.00000 1.0000000 0.000000 0.50000 NA NA 0.55952 NA 1.000000 0.85714 0.500000 0.50000 0.500000 0.584416 0.625000 0.700000 1.000000 1.000000 0.392857 0.166667 1.00000 0.071429 0.285714 0.520952 0.000000 0.000000 0.069048 0.400000 0.42857 0.65000 NA 0.140909 0 0.31148 0.345257 0.01012572 3 0.35215 0.27978 0.0723691 0.61507410 0.93497442 lowCoverage 1.00000 1.00000 lowCoverage 0.411713 0.92161427 lowCoverage 1 1.000000 lowCoverage 0.0342504 0.653408 lowCoverage 1 lowCoverage 0.31486 0.227513 0.0916312 4 0.38134 0.22602 0.1553152 2.9595e-04 9.8685e-01 lowCoverage 5.2849e-03 1.0000e+00 lowCoverage 4.5144e-02 9.1920e-01 lowCoverage 7.4007e-01 1.000000 lowCoverage 0.1788674 2.7097e-02 lowCoverage 7.0189e-01 lowCoverage 0.31486 0.24150 0.0695306 4 0.38134 0.28229 0.0990404 6.2836e-03 9.7940e-01 lowCoverage 3.9272e-01 1.0000000 lowCoverage 1.1167e-01 9.1054e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0899458 2.8942e-01 lowCoverage 1.0000000 lowCoverage 0.348837 0.228471 0.109874 4 0.38975 0.26027 0.12948552 3.7697e-04 3.8439e-01 lowCoverage 7.1126e-03 1.0000e+00 lowCoverage 2.9202e-02 0.67672090 lowCoverage 5.0349e-01 1.000000 lowCoverage 0.144617 2.8160e-02 lowCoverage 6.4608e-01 lowCoverage 0.34687 0.24150 0.0869129 4 0.35972 0.28229 0.0774230 4.5645e-02 8.8401e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 1.1932e-01 0.92993247 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0556954 0.4289861 lowCoverage 1.000000 lowCoverage 0.227513 0.24150 -0.0205676 6 0.22602 0.28229 -0.05627477 3.3842e-01 2.2256e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0877e-01 2.7639e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0889216 2.2246e-01 insignificant 1.00000000 insignificant chr14 98790478 98791478 130056 ENSG00000220591 0.877566 101 6 0.801049 210 7 0.44352 140 7 0.917391 74 5 0.876616 137 6 0.92379 124 5 0.741718 88 6 0.85272 125 6 0.7341245 111 7 0.864966 121 7 0.85032 216 7 0.750540 67 5 0.900202 208 7 NA 0 0 0.796887 113 7 0.638464 79 6 0.64430 49 5 0.79962 120 6 0.850712 208 7 0.80531 112 5 0.96034 90 7 0.484670 51 3 0.79435 117 6 0.76587 54 6 0.806818 30 3 0.89222 192 6 0.933724 81 7 0.96667 20 3 0.815119 176 6 0.859598 173 7 0.838539 206 7 0.88803 160 5 0.261736 185 7 0.112340 179 7 0.33333 195 6 0.632576 27 3 0.44308 55 6 0.56912 150 7 0.484240 117 3 0.52569 105 6 0.69849 84 3 0.42297 92 3 0.44983 79 6 0.86002 0.791986 0.50763 0.853029 0.882143 0.88409 0.737582 0.799451 0.692337 0.830505 0.85848 0.75985 0.8721855 NA 0.75889 0.643580 0.619054 0.78395 0.83250 0.810616 0.94646 0.476795 0.75692 0.875356 0.822312 0.867112 0.926417 0.974359 0.731284 0.845243 0.794480 0.89051 0.222660 0.073827 0.284713 0.671214 0.259422 0.534234 0.517443 0.54088 0.61250 0.49120 0.418475 2 0.81814 0.842963 -0.03870522 6 0.81325 0.85104 -0.0377898 0.99015245 0.02888937 weaklyHypometh 1.00000 1.00000 insignificant 0.999950 0.00358228 weaklyHypometh 1 0.398032 insignificant -0.0406816 0.383466 insignificant 1 insignificant 0.81814 0.276865 0.4992205 7 0.81325 0.29770 0.5155555 8.1618e-34 1.0000e+00 hypermethylated 9.0686e-32 1.0000e+00 hypermethylated 2.4972e-09 1.0000e+00 hypermethylated 2.4972e-07 1.000000 hypermethylated 0.4011161 2.8486e-03 weaklyHypermeth 1.1311e-01 insignificant 0.81814 0.50734 0.2924771 3 0.81325 0.51959 0.2936640 3.9750e-18 1.0000e+00 lowCoverage 1.3250e-15 1.0000000 lowCoverage 2.8916e-07 1.0000e+00 lowCoverage 7.2290e-05 1.000000 lowCoverage 0.2769043 1.8346e-03 lowCoverage 0.1389724 lowCoverage 0.842963 0.276865 0.541322 6 0.85104 0.29770 0.55334532 1.6394e-24 1.0000e+00 hypermethylated 1.6394e-22 1.0000e+00 hypermethylated 1.7371e-09 1.00000000 hypermethylated 2.1714e-07 1.000000 hypermethylated 0.441798 1.3759e-03 weaklyHypermeth 5.9823e-02 weaklyHypermeth 0.84296 0.50734 0.3125842 3 0.85104 0.51959 0.3314538 1.0973e-13 1.0000e+00 lowCoverage 2.7432e-11 1.000000 lowCoverage 4.0940e-07 1.00000000 lowCoverage 1.3647e-04 1.00000 lowCoverage 0.3175859 0.0005971 lowCoverage 0.099518 lowCoverage 0.276865 0.50734 -0.2890276 3 0.29770 0.51959 -0.22189148 9.7184e-01 4.9861e-05 lowCoverage 1.0000e+00 1.6620e-03 lowCoverage 9.8346e-01 2.9769e-02 lowCoverage 1.0000000 6.0753e-01 lowCoverage -0.1242118 2.2002e-01 lowCoverage 1.00000000 lowCoverage chr14 98790621 98791621 130057 ENSG00000220591 0.877566 101 6 0.801049 210 7 0.44352 140 7 0.917391 74 5 0.876616 137 6 0.92379 124 5 0.741718 88 6 0.85272 125 6 0.7341245 111 7 0.864966 121 7 0.85032 216 7 0.750540 67 5 0.900202 208 7 NA 0 0 0.796887 113 7 0.638464 79 6 0.64430 49 5 0.79962 120 6 0.850712 208 7 0.80531 112 5 0.96034 90 7 0.484670 51 3 0.79435 117 6 0.76587 54 6 0.806818 30 3 0.89222 192 6 0.933724 81 7 0.96667 20 3 0.815119 176 6 0.859598 173 7 0.838539 206 7 0.88803 160 5 0.261736 185 7 0.112340 179 7 0.33333 195 6 0.632576 27 3 0.44308 55 6 0.56912 150 7 0.484240 117 3 0.52569 105 6 0.69849 84 3 0.42297 92 3 0.44983 79 6 0.86002 0.791986 0.50763 0.853029 0.882143 0.88409 0.737582 0.799451 0.692337 0.830505 0.85848 0.75985 0.8721855 NA 0.75889 0.643580 0.619054 0.78395 0.83250 0.810616 0.94646 0.476795 0.75692 0.875356 0.822312 0.867112 0.926417 0.974359 0.731284 0.845243 0.794480 0.89051 0.222660 0.073827 0.284713 0.671214 0.259422 0.534234 0.517443 0.54088 0.61250 0.49120 0.418475 2 0.81814 0.842963 -0.03870522 6 0.81325 0.85104 -0.0377898 0.99015245 0.02888937 weaklyHypometh 1.00000 1.00000 insignificant 0.999950 0.00358228 weaklyHypometh 1 0.398032 insignificant -0.0406816 0.383466 insignificant 1 insignificant 0.81814 0.276865 0.4992205 7 0.81325 0.29770 0.5155555 8.1618e-34 1.0000e+00 hypermethylated 9.0686e-32 1.0000e+00 hypermethylated 2.4972e-09 1.0000e+00 hypermethylated 2.4972e-07 1.000000 hypermethylated 0.4011161 2.8486e-03 weaklyHypermeth 1.1311e-01 insignificant 0.81814 0.50734 0.2924771 3 0.81325 0.51959 0.2936640 3.9750e-18 1.0000e+00 lowCoverage 1.3250e-15 1.0000000 lowCoverage 2.8916e-07 1.0000e+00 lowCoverage 7.2290e-05 1.000000 lowCoverage 0.2769043 1.8346e-03 lowCoverage 0.1389724 lowCoverage 0.842963 0.276865 0.541322 6 0.85104 0.29770 0.55334532 1.6394e-24 1.0000e+00 hypermethylated 1.6394e-22 1.0000e+00 hypermethylated 1.7371e-09 1.00000000 hypermethylated 2.1714e-07 1.000000 hypermethylated 0.441798 1.3759e-03 weaklyHypermeth 5.9823e-02 weaklyHypermeth 0.84296 0.50734 0.3125842 3 0.85104 0.51959 0.3314538 1.0973e-13 1.0000e+00 lowCoverage 2.7432e-11 1.000000 lowCoverage 4.0940e-07 1.00000000 lowCoverage 1.3647e-04 1.00000 lowCoverage 0.3175859 0.0005971 lowCoverage 0.099518 lowCoverage 0.276865 0.50734 -0.2890276 3 0.29770 0.51959 -0.22189148 9.7184e-01 4.9861e-05 lowCoverage 1.0000e+00 1.6620e-03 lowCoverage 9.8346e-01 2.9769e-02 lowCoverage 1.0000000 6.0753e-01 lowCoverage -0.1242118 2.2002e-01 lowCoverage 1.00000000 lowCoverage chr14 99199848 99200848 130079 HHIPL1 ENSG00000182218 0.065113 147 4 0.050098 190 5 0.20001 169 5 0.092103 150 4 0.079189 140 5 0.37256 237 5 0.048016 158 5 0.10659 204 5 0.0067926 225 5 0.060967 232 5 0.14295 177 5 0.076331 140 5 0.028817 195 4 0.033898 160 5 0.098735 233 5 0.027027 160 5 0.28125 56 3 0.14105 165 3 0.044892 106 4 0.11731 172 5 0.20177 112 5 0.025387 137 4 0.18451 116 4 0.24567 147 5 0.054878 70 3 0.12471 241 5 0.041392 187 5 0.06128 154 5 0.089752 130 3 0.048074 291 5 0.039359 236 5 0.25700 175 5 0.262997 132 5 0.477273 42 2 0.84000 105 3 0.536667 21 2 0.42406 159 5 0.24977 179 5 0.025972 212 5 0.14776 173 5 0.26780 97 2 0.25244 103 3 0.20619 161 5 0.07643 0.043267 0.16717 0.062653 0.075084 0.23176 0.014428 0.059883 0.014775 0.024486 0.11942 0.10155 0.0053131 0.076627 0.02668 0.062079 0.085595 0.15463 0.02550 0.052522 0.19518 0.056884 0.12308 0.032886 0.018207 0.034748 0.033449 0.045658 0.052419 0.013547 0.037281 0.14375 0.214686 0.445792 0.582311 0.292219 0.462949 0.068437 0.013727 0.18159 0.06426 0.20116 0.079214 3 0.07699 0.069744 0.01403321 5 0.28360 0.15367 0.1299298 0.36854071 0.98983705 insignificant 1.00000 1.00000 insignificant 0.372696 0.96700281 insignificant 1 1.000000 insignificant -0.0107975 0.738285 lowCoverage 1 lowCoverage 0.07699 0.326019 -0.2316974 5 0.28360 0.47212 -0.1885153 9.9288e-01 3.0492e-10 hypomethylated 1.0000e+00 3.0492e-07 hypomethylated 9.9994e-01 1.8748e-04 hypomethylated 1.0000e+00 0.047960 hypomethylated -0.3614436 8.5496e-03 lowCoverage 2.5908e-01 lowCoverage 0.07699 0.12215 -0.0293571 5 0.28360 0.19013 0.0934779 7.4315e-01 4.3062e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6532e-01 7.3440e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0763463 1.6627e-01 lowCoverage 1.0000000 lowCoverage 0.069744 0.326019 -0.248270 5 0.15367 0.47212 -0.31844507 9.9910e-01 2.6071e-10 hypomethylated 1.0000e+00 2.6071e-07 hypomethylated 9.9991e-01 0.00001043 hypomethylated 1.0000e+00 0.010430 hypomethylated -0.350646 9.3808e-03 lowCoverage 3.1301e-01 lowCoverage 0.07014 0.12332 -0.0459854 5 0.17613 0.29136 -0.1152287 9.8134e-01 4.8476e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8495e-01 0.24662240 insignificant 1.0000e+00 1.00000 insignificant -0.0655487 0.2355183 lowCoverage 1.000000 lowCoverage 0.326019 0.12215 0.2291143 5 0.47212 0.19013 0.28199318 1.3674e-04 9.9929e-01 hypermethylated 2.7347e-02 1.0000e+00 hypermethylated 1.0389e-02 9.9995e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.2850973 2.2628e-02 lowCoverage 0.61157778 lowCoverage chr14 99818259 99819259 130088 YY1 ENSG00000100811 0.944938 293 4 0.887475 275 5 0.86353 227 5 0.978330 235 4 0.885531 39 4 0.95200 318 4 0.904241 77 4 0.86869 76 4 0.9480263 53 4 0.431818 24 2 0.91651 237 4 0.950000 17 1 0.921875 46 4 0.904167 31 3 1.000000 50 2 1.000000 12 0 NA 0 0 0.93397 268 4 0.881808 154 4 0.97935 216 4 0.83333 56 4 1.000000 8 0 0.94720 122 5 0.93269 79 4 0.928571 75 4 0.98344 298 5 0.804438 64 4 0.91667 43 4 0.947222 137 4 0.950495 307 5 0.941039 299 5 0.84241 207 4 0.888981 260 5 1.000000 143 4 0.96935 376 5 0.570261 35 2 0.81534 124 4 0.92602 275 5 0.906981 192 4 0.90994 194 4 0.90927 244 4 0.83148 233 2 0.96907 213 4 0.92943 0.873146 0.85913 0.973210 0.887014 0.93992 0.901954 0.864264 0.945551 0.452381 0.91745 0.95238 0.9241071 0.904365 1.00000 1.000000 NA 0.91618 0.88527 0.972955 0.83900 1.000000 0.94924 0.929487 0.931973 0.987176 0.804650 0.920635 0.947354 0.946849 0.935210 0.92789 0.884853 1.000000 0.959868 0.756540 0.821902 0.913503 0.905621 0.88787 0.88874 0.83536 0.960921 0 0.92183 0.939823 -0.01768015 5 0.92256 0.94190 -0.0193421 0.96206257 0.03410917 weaklyHypometh 1.00000 1.00000 insignificant 0.524476 0.23419555 insignificant 1 1.000000 insignificant -0.0162098 0.626287 lowCoverage 1 lowCoverage 0.92183 0.906843 0.0135390 5 0.92256 0.90809 0.0144697 2.6548e-01 5.4670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8566e-01 8.4844e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0410900 5.7435e-01 lowCoverage 1.0000e+00 lowCoverage 0.92183 0.91264 0.0102647 4 0.92256 0.92751 -0.0049582 3.7189e-01 5.9154e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.6101e-01 7.4357e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0025994 9.4236e-01 lowCoverage 1.0000000 lowCoverage 0.939823 0.906843 0.032792 5 0.94190 0.90809 0.03381186 1.2300e-01 9.7462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4654e-01 0.83011247 insignificant 1.0000e+00 1.000000 insignificant 0.057300 4.2196e-01 lowCoverage 1.0000e+00 lowCoverage 0.93982 0.91264 0.0303630 4 0.94190 0.92751 0.0143840 1.5798e-01 8.5376e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.5507e-02 0.41185345 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0136105 0.6380388 lowCoverage 1.000000 lowCoverage 0.906843 0.91264 -0.0046184 4 0.90809 0.92751 -0.01942789 8.5812e-01 3.0636e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2549e-01 6.1942e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0436893 5.4140e-01 lowCoverage 1.00000000 lowCoverage chr14 100004048 100005048 130104 WDR25 ENSG00000176473 0.965986 67 5 0.829674 185 7 0.87585 95 7 0.948195 45 6 0.912698 37 4 0.93077 30 4 0.859589 162 7 0.87027 165 7 0.8754926 91 7 0.893132 102 7 0.85504 179 7 0.906250 84 4 0.880655 108 7 0.794444 37 2 0.878261 136 7 0.843228 104 7 0.96652 54 4 0.93750 15 0 0.898298 201 7 0.90865 110 7 0.86533 75 7 0.861742 28 2 0.87846 129 7 0.66923 41 3 1.000000 7 0 0.92429 118 6 0.882540 77 6 0.89165 92 6 0.812121 80 7 0.910448 163 7 0.891764 124 7 0.91580 147 7 0.840360 79 6 0.847368 72 4 0.97667 163 6 1.000000 4 0 0.83117 91 7 0.69293 113 6 0.728608 88 7 0.81968 75 6 0.68132 26 1 1.00000 43 5 0.93750 18 1 0.98606 0.765115 0.91492 1.000000 0.970190 0.93021 0.833156 0.878492 0.908920 0.941463 0.92511 0.91463 0.9595819 NA 0.92732 0.921022 0.960801 0.92683 0.91812 0.950542 0.95497 0.993469 0.85198 0.812383 NA 0.923171 0.948374 0.810950 0.861419 0.918614 0.940767 0.88516 0.915947 0.836200 0.954228 0.898743 0.864111 0.913473 0.875407 0.97749 0.70732 1.00000 0.926829 0 0.88092 0.874074 0.00292501 7 0.89690 0.89206 0.0048375 0.21256839 0.60110439 insignificant 1.00000 1.00000 insignificant 0.522647 0.44100907 insignificant 1 1.000000 insignificant 0.0162436 0.522816 insignificant 1 insignificant 0.88086 0.823755 0.0471545 7 0.88217 0.84064 0.0415318 9.8979e-02 1.5942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2019e-01 2.5359e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0267772 5.8895e-01 lowCoverage 1.0000e+00 lowCoverage 0.88086 0.78800 0.0907934 6 0.88217 0.80018 0.0819907 1.5864e-05 4.8747e-01 weaklyHypermeth 1.3220e-03 1.0000000 weaklyHypermeth 1.8762e-01 4.0232e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0581040 3.9350e-01 lowCoverage 1.0000000 lowCoverage 0.873957 0.823755 0.043345 7 0.87665 0.84064 0.03600321 4.8899e-01 5.2187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5829e-01 0.64182610 insignificant 1.0000e+00 1.000000 insignificant 0.010534 8.4164e-01 lowCoverage 1.0000e+00 lowCoverage 0.87396 0.78800 0.0878868 6 0.87665 0.80018 0.0764621 2.7127e-03 1.1169e-01 weaklyHypermeth 1.6954e-01 1.000000 insignificant 2.8643e-01 0.20429641 insignificant 1.0000e+00 1.00000 insignificant 0.0418604 0.5440665 lowCoverage 1.000000 lowCoverage 0.823755 0.78800 0.0568416 6 0.84064 0.80018 0.04045887 2.2384e-01 4.4587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6552e-01 3.2128e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0313268 6.8993e-01 lowCoverage 1.00000000 lowCoverage chr14 100086058 100087058 130108 WDR25 ENSG00000176473 0.865413 214 12 0.793184 151 10 0.83187 121 9 0.904837 251 11 0.656250 54 4 0.87482 262 12 0.619646 69 6 0.83511 201 13 0.8239465 153 9 0.931280 142 9 0.87352 308 13 0.845455 46 3 0.925163 271 9 0.692454 89 7 0.826475 102 9 0.720000 11 1 0.42460 22 2 0.79667 349 13 0.919742 186 11 0.77209 257 12 0.57952 172 10 0.761486 199 11 0.77861 119 7 0.68479 94 8 0.954944 257 11 0.89807 176 10 0.769988 183 9 0.68654 40 4 0.824933 207 13 0.926979 240 10 0.851514 206 13 0.86893 291 12 0.530920 174 12 0.509815 252 12 0.63176 160 7 0.657341 44 5 0.52057 150 9 0.59415 301 12 0.838387 129 8 0.78698 218 11 0.92616 128 11 0.88126 108 10 0.72697 152 10 0.86892 0.795283 0.80360 0.901973 0.759747 0.86682 0.693226 0.847353 0.835370 0.881640 0.82039 0.72422 0.8884757 0.871329 0.80539 0.707426 0.450520 0.87530 0.88346 0.834597 0.80023 0.828204 0.77456 0.732982 0.928409 0.852690 0.808339 0.612534 0.830710 0.881785 0.902318 0.84330 0.630906 0.574204 0.529142 0.702135 0.656487 0.694118 0.804051 0.81976 0.91459 0.82186 0.886937 3 0.84566 0.844495 0.00601901 12 0.69963 0.64793 0.0517055 0.51079372 0.76643031 insignificant 1.00000 1.00000 insignificant 0.705919 0.90627811 insignificant 1 1.000000 insignificant -0.0022323 0.958373 insignificant 1 insignificant 0.84566 0.575533 0.2569946 12 0.69963 0.42570 0.2739306 7.0895e-21 9.9875e-01 hypermethylated 3.9386e-19 1.0000e+00 hypermethylated 9.4263e-06 9.8733e-01 hypermethylated 4.2847e-04 1.000000 hypermethylated 0.2225343 1.5645e-05 hypermethylated 1.2744e-03 hypermethylated 0.84634 0.85986 -0.0114344 11 0.78620 0.72979 0.0564125 2.3376e-01 3.3845e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6265e-01 2.7714e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0353250 4.4690e-01 insignificant 1.0000000 insignificant 0.844567 0.574468 0.263267 12 0.66553 0.40442 0.26111386 6.7589e-15 9.9922e-01 hypermethylated 3.2185e-13 1.0000e+00 hypermethylated 8.9448e-06 0.99295550 hypermethylated 4.2594e-04 1.000000 hypermethylated 0.224767 5.4245e-05 hypermethylated 4.1727e-03 hypermethylated 0.84669 0.85986 -0.0170571 11 0.76515 0.72979 0.0353634 3.6279e-01 3.3205e-01 insignificant 1.0000e+00 1.000000 insignificant 8.5283e-01 0.17116260 insignificant 1.0000e+00 1.00000 insignificant -0.0330927 0.4997041 insignificant 1.000000 insignificant 0.578751 0.85986 -0.2906530 11 0.53922 0.72979 -0.19056620 8.9498e-01 6.1414e-08 hypomethylated 1.0000e+00 4.0943e-06 hypomethylated 9.9137e-01 3.6781e-04 hypomethylated 1.0000000 1.8672e-02 hypomethylated -0.2578593 3.9872e-04 hypomethylated 0.02848008 hypomethylated chr14 100110182 100111182 130109 BEGAIN ENSG00000183092 0.867259 290 5 0.840614 201 6 0.87239 173 6 0.962009 263 4 0.912696 130 6 0.97497 354 6 0.934578 178 7 0.95811 111 7 0.8720430 119 7 0.928922 58 6 0.92507 307 7 0.976077 110 5 0.945098 75 6 0.863276 43 4 0.914399 102 6 0.954270 167 5 0.93224 88 4 0.89420 365 4 0.956151 276 7 0.99007 208 5 0.90276 133 7 0.777778 15 1 0.91982 129 6 0.95860 86 7 0.891741 178 4 0.88338 229 6 0.929042 77 6 0.79012 59 5 0.948052 154 6 0.865773 213 7 0.961816 268 7 0.95978 218 4 0.569003 208 7 0.430887 162 7 0.71579 220 6 0.833333 48 3 0.61018 228 7 0.88878 258 7 0.801013 223 4 0.85234 237 6 0.82329 224 5 0.85657 266 4 0.81862 210 4 0.92083 0.844112 0.90257 0.951270 0.895214 0.95699 0.973747 0.941447 0.850628 0.916467 0.90577 0.97386 0.9223785 0.911454 0.89226 0.948354 0.950754 0.93123 0.96366 0.974064 0.89851 0.914487 0.89697 0.877687 0.884151 0.910551 0.908982 0.924215 0.907828 0.900840 0.940955 0.94228 0.670778 0.482053 0.726614 0.992358 0.626287 0.907055 0.869132 0.89247 0.88561 0.81975 0.850822 2 0.92648 0.917332 0.00967163 6 0.87208 0.92214 -0.0500590 0.09940730 0.86811443 insignificant 1.00000 1.00000 insignificant 0.558770 0.53755816 insignificant 1 1.000000 insignificant 0.0246665 0.243638 insignificant 1 insignificant 0.92671 0.723063 0.2237917 7 0.92524 0.62606 0.2991724 3.2981e-19 1.0000e+00 hypermethylated 1.5705e-17 1.0000e+00 hypermethylated 2.2809e-04 9.9960e-01 hypermethylated 7.6029e-03 1.000000 hypermethylated 0.2490595 1.5918e-02 weaklyHypermeth 4.6817e-01 insignificant 0.92671 0.85000 0.0749624 5 0.92524 0.83332 0.0919141 2.3671e-07 1.0000e+00 weaklyHypermeth 3.3816e-05 1.0000000 weaklyHypermeth 1.8751e-04 1.0000e+00 weaklyHypermeth 2.3439e-02 1.000000 weaklyHypermeth 0.0933543 3.0578e-05 lowCoverage 0.0076444 lowCoverage 0.916287 0.723310 0.209706 6 0.87214 0.67281 0.19933483 1.6445e-09 9.9989e-01 hypermethylated 5.8731e-08 1.0000e+00 hypermethylated 9.3790e-03 0.99795666 weaklyHypermeth 1.9539e-01 1.000000 insignificant 0.224393 2.2735e-02 weaklyHypermeth 6.3154e-01 insignificant 0.91719 0.85000 0.0662704 5 0.91102 0.83332 0.0776958 9.4074e-05 9.9791e-01 weaklyHypermeth 9.4074e-03 1.000000 weaklyHypermeth 1.5008e-03 0.98773760 weaklyHypermeth 1.5008e-01 1.00000 insignificant 0.0686878 0.0049661 lowCoverage 0.565356 lowCoverage 0.723063 0.85000 -0.0974679 5 0.62606 0.83332 -0.20725826 9.9528e-01 3.4912e-03 weaklyHypometh 1.0000e+00 7.1249e-02 weaklyHypometh 9.2283e-01 1.9409e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1557052 7.7139e-02 lowCoverage 1.00000000 lowCoverage chr14 100113181 100114181 130110 BEGAIN ENSG00000183092 0.864031 244 8 0.891049 325 8 0.85073 330 8 0.884641 297 6 0.919515 291 8 0.77195 439 8 0.790951 285 8 0.87234 310 8 0.8213447 316 8 0.887081 423 8 0.87846 256 8 0.869707 280 8 0.926080 319 8 0.884714 224 6 0.786489 341 8 0.937685 282 8 0.89759 107 7 0.73018 296 6 0.858985 327 8 0.75780 343 8 0.73209 205 8 0.562000 197 6 0.89619 246 8 0.74440 147 8 0.830342 112 6 0.94193 333 8 0.808476 394 7 0.80249 239 8 0.887121 271 7 0.929175 351 8 0.914585 309 8 0.89415 301 8 0.819095 228 8 0.626437 193 8 0.85366 163 4 0.815909 61 6 0.74053 299 8 0.75716 304 8 0.736842 308 8 0.88924 250 7 0.93209 222 6 0.88789 229 6 0.72103 228 6 0.87399 0.861746 0.83539 0.902985 0.930513 0.87309 0.866850 0.850331 0.848591 0.897093 0.86970 0.90158 0.9334175 0.882398 0.90004 0.917997 0.918007 0.86168 0.85922 0.905078 0.88763 0.840962 0.87149 0.891231 0.917201 0.937951 0.884449 0.907643 0.891143 0.937204 0.929142 0.91391 0.831830 0.617318 0.775260 0.857990 0.832827 0.801823 0.920679 0.92907 0.91222 0.92008 0.902300 6 0.88136 0.903673 -0.02371651 8 0.77962 0.78759 -0.0079680 0.81720742 0.00639873 weaklyHypometh 1.00000 0.63987 insignificant 0.634064 0.03684692 weaklyHypometh 1 1.000000 insignificant 0.0254866 0.466899 insignificant 1 insignificant 0.88136 0.792135 0.0919391 8 0.77962 0.78694 -0.0073128 2.1654e-06 5.1850e-01 weaklyHypermeth 4.9213e-05 1.0000e+00 weaklyHypermeth 1.7901e-02 2.6200e-01 weaklyHypermeth 3.3150e-01 1.000000 insignificant 0.0852683 5.0359e-02 insignificant 1.0000e+00 insignificant 0.88209 0.91181 -0.0284397 7 0.86625 0.76766 0.0985925 6.9746e-02 2.0824e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 4.3142e-01 2.3883e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.0206460 6.6922e-01 insignificant 1.0000000 insignificant 0.903704 0.790865 0.115103 8 0.80690 0.71540 0.09150470 1.8341e-04 4.2855e-01 weaklyHypermeth 3.6682e-03 1.0000e+00 weaklyHypermeth 1.9833e-02 0.26945378 weaklyHypermeth 3.6728e-01 1.000000 insignificant 0.059782 2.1426e-01 insignificant 1.0000e+00 insignificant 0.90565 0.91108 -0.0020411 7 0.85759 0.69089 0.1667013 1.4352e-01 6.4037e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3178e-01 0.29613559 insignificant 1.0000e+00 1.00000 insignificant -0.0048405 0.9302624 insignificant 1.000000 insignificant 0.790530 0.91108 -0.1324945 7 0.68694 0.69089 -0.00395392 5.5804e-01 2.5124e-02 weaklyHypometh 1.0000e+00 4.0267e-01 insignificant 9.4085e-01 5.7512e-02 insignificant 1.0000000 9.8180e-01 insignificant -0.0646222 2.7197e-01 insignificant 1.00000000 insignificant chr14 100200809 100201809 130111 C14orf70 ENSG00000196273 0.794461 148 9 0.761155 155 9 0.64104 114 6 0.765996 131 8 0.881061 52 7 0.85647 186 9 0.795502 119 8 0.81836 173 9 0.8229426 111 5 0.929807 116 5 0.77186 210 9 0.900732 76 4 0.843054 173 7 0.883333 17 1 0.877203 75 5 0.600000 53 5 0.73351 100 4 0.77238 130 6 0.809319 92 5 0.80346 202 8 0.86764 68 7 0.754127 119 4 0.92242 140 8 0.58517 105 9 0.846848 79 7 0.78263 278 9 0.605125 142 8 0.64042 91 5 0.794333 130 7 0.829357 246 9 0.836059 231 9 0.83767 203 9 0.248420 256 9 0.173994 161 8 0.37721 128 6 0.158730 86 7 0.26460 164 9 0.40938 252 9 0.783381 204 9 0.78763 253 9 0.89411 190 7 0.83500 133 4 0.73104 241 7 0.84175 0.849560 0.77845 0.822545 0.812500 0.83633 0.730119 0.860861 0.811202 0.900720 0.89153 0.79074 0.8023322 0.833225 0.90607 0.740330 0.736591 0.82117 0.79904 0.862455 0.69360 0.749752 0.96405 0.584451 0.778340 0.824627 0.572229 0.609375 0.907063 0.886390 0.871572 0.89005 0.056466 0.047839 0.314032 0.060250 0.097131 0.112461 0.813777 0.81517 0.89805 0.82496 0.718684 4 0.82491 0.793668 0.02237290 8 0.79630 0.72647 0.0698346 0.21276949 0.96715860 insignificant 1.00000 1.00000 insignificant 0.223852 0.95285456 insignificant 1 1.000000 insignificant 0.0279323 0.451185 insignificant 1 insignificant 0.82510 0.179561 0.6356906 8 0.80926 0.30115 0.5081192 1.7000e-63 9.9987e-01 hypermethylated 5.6665e-61 1.0000e+00 hypermethylated 3.0023e-16 9.9988e-01 hypermethylated 7.5058e-14 1.000000 hypermethylated 0.5310280 8.0790e-06 hypermethylated 7.3446e-04 hypermethylated 0.82510 0.79628 0.0284711 7 0.80926 0.78352 0.0257396 4.4113e-02 5.9331e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 8.6606e-02 5.9472e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0031490 9.2622e-01 insignificant 1.0000000 insignificant 0.794102 0.179561 0.628633 8 0.79911 0.30115 0.49796778 1.6152e-34 1.0000e+00 hypermethylated 3.2304e-32 1.0000e+00 hypermethylated 1.7669e-13 1.00000000 hypermethylated 4.4174e-11 1.000000 hypermethylated 0.503096 1.4624e-06 hypermethylated 1.8281e-04 hypermethylated 0.79410 0.79628 0.0149007 7 0.79911 0.78352 0.0155881 4.1081e-01 5.9444e-01 insignificant 1.0000e+00 1.000000 insignificant 3.1285e-01 0.57851277 insignificant 1.0000e+00 1.00000 insignificant -0.0310813 0.4690938 insignificant 1.000000 insignificant 0.179561 0.79628 -0.6384827 7 0.30115 0.78352 -0.48237967 9.9990e-01 3.0846e-25 hypomethylated 1.0000e+00 1.0282e-22 hypomethylated 9.9998e-01 1.1679e-08 hypomethylated 1.0000000 3.5182e-06 hypomethylated -0.5341770 4.0563e-06 hypomethylated 0.00067605 hypomethylated chr14 100224680 100225680 130112 C14orf70 ENSG00000196273 0.896458 209 10 0.511654 212 9 0.59811 259 11 0.798332 160 7 0.782573 132 11 0.93320 353 10 0.524046 238 11 0.66484 224 11 0.6403784 182 7 0.690601 147 7 0.65916 273 11 0.798517 68 7 0.245179 148 7 0.782841 132 7 0.755566 142 7 0.698321 134 7 1.00000 2 0 0.70356 163 3 0.501833 242 10 0.58983 315 10 0.82403 72 7 0.454545 18 0 0.80268 190 10 0.78049 121 10 0.845009 56 4 0.69011 337 11 0.565471 323 8 0.66708 92 7 0.716966 228 10 0.586341 322 11 0.553518 342 11 0.80602 265 10 0.709554 161 11 0.818895 218 11 0.66735 483 11 0.800000 71 4 0.74095 232 11 0.80991 483 10 0.882664 321 10 0.68961 187 7 0.80742 84 6 0.75264 332 10 0.86453 197 8 0.81355 0.570810 0.60876 0.771576 0.725155 0.89815 0.519381 0.591338 0.614899 0.685332 0.64173 0.80287 0.3213012 0.769835 0.69739 0.618009 NA 0.68060 0.40110 0.618554 0.76203 0.345588 0.83817 0.620226 0.691829 0.697487 0.591037 0.615084 0.750682 0.544521 0.530246 0.80829 0.674274 0.764140 0.605212 0.627016 0.707065 0.844107 0.841927 0.72748 0.70480 0.72635 0.757770 2 0.65676 0.687817 -0.01582303 10 0.69062 0.68847 0.0021494 0.85737055 0.43889166 insignificant 1.00000 1.00000 insignificant 0.910679 0.43210459 insignificant 1 1.000000 insignificant -0.0022720 0.966153 insignificant 1 insignificant 0.65639 0.761529 -0.0683243 10 0.66484 0.73765 -0.0728075 8.8842e-01 1.4849e-05 weaklyHypometh 1.0000e+00 3.7122e-03 weaklyHypometh 9.7372e-01 4.5237e-04 weaklyHypometh 1.0000e+00 0.064624 weaklyHypometh -0.0690256 1.4602e-01 insignificant 1.0000e+00 insignificant 0.65639 0.73773 -0.1046617 10 0.66484 0.76664 -0.1018008 9.4627e-01 2.4867e-06 weaklyHypometh 1.0000e+00 0.0012434 weaklyHypometh 9.7744e-01 4.5645e-05 weaklyHypometh 1.0000e+00 0.045645 weaklyHypometh -0.1106237 5.2474e-02 insignificant 1.0000000 insignificant 0.687421 0.761529 -0.066310 11 0.66251 0.73765 -0.07513602 8.8634e-01 5.5312e-08 weaklyHypometh 1.0000e+00 2.7656e-05 weaklyHypometh 9.1232e-01 0.00227908 weaklyHypometh 1.0000e+00 0.569769 insignificant -0.066754 1.5322e-01 insignificant 1.0000e+00 insignificant 0.68742 0.73773 -0.0961299 10 0.66251 0.76664 -0.1041293 9.9900e-01 1.5868e-05 weaklyHypometh 1.0000e+00 0.015868 weaklyHypometh 9.9825e-01 0.00036853 weaklyHypometh 1.0000e+00 0.36853 insignificant -0.1083517 0.0558387 insignificant 1.000000 insignificant 0.761529 0.73773 -0.0592836 10 0.73765 0.76664 -0.02899332 3.6284e-01 2.0596e-02 weaklyHypometh 1.0000e+00 3.3764e-01 insignificant 6.7535e-01 2.8990e-02 weaklyHypometh 1.0000000 6.0753e-01 insignificant -0.0415981 3.7065e-01 insignificant 1.00000000 insignificant chr14 100381641 100382641 130121 ENSG00000214515 0.987179 85 4 0.845058 120 4 0.97877 205 6 0.992063 45 3 0.940496 72 4 0.99048 70 4 0.919145 157 4 0.93910 116 5 0.9579083 122 6 0.941468 105 6 0.96214 208 6 0.933102 108 6 0.942724 163 6 0.666667 3 0 0.993197 198 6 0.792802 105 4 0.98824 72 4 0.89740 55 6 0.958399 173 6 0.88548 100 6 0.75376 65 6 0.900000 8 0 0.84442 74 4 0.93704 46 6 1.000000 4 0 0.99415 165 6 0.986111 48 6 1.00000 19 0 0.959402 235 6 0.889845 171 4 0.933007 157 6 0.97847 128 6 0.905413 156 6 0.640038 143 6 0.90196 74 6 0.899537 43 6 0.86394 51 6 0.68189 162 6 0.935332 94 4 0.95064 103 6 0.95455 62 4 0.88492 90 4 0.97701 79 4 0.97886 0.912157 0.96420 0.986914 0.915326 0.98430 0.960885 0.972108 0.938209 0.976463 0.96892 0.93349 0.9179803 0.870459 0.98878 0.805676 0.983386 0.90007 0.97270 0.925598 0.74971 0.858779 0.84677 0.913656 0.946971 0.990358 0.976463 1.000000 0.971756 0.965140 0.967537 0.96948 0.885490 0.658727 0.833857 0.907549 0.828164 0.585777 0.896992 0.92363 0.95003 0.90040 0.962095 3 0.94698 0.946429 0.00046950 5 0.94551 0.94177 0.0037378 0.67603018 0.79397883 insignificant 1.00000 1.00000 insignificant 0.829800 0.39618372 insignificant 1 1.000000 insignificant -0.0057590 0.838762 lowCoverage 1 lowCoverage 0.94698 0.758347 0.1901895 6 0.94551 0.78463 0.1608837 1.7736e-10 9.9998e-01 weaklyHypermeth 5.7212e-09 1.0000e+00 weaklyHypermeth 1.3151e-04 9.9748e-01 weaklyHypermeth 4.5350e-03 1.000000 weaklyHypermeth 0.1101274 7.8847e-02 lowCoverage 1.0000e+00 lowCoverage 0.94698 0.92290 0.0241934 4 0.94551 0.93963 0.0058847 5.4681e-02 5.3043e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.1464e-01 3.4394e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0148989 5.3715e-01 lowCoverage 1.0000000 lowCoverage 0.946429 0.758347 0.192997 5 0.94177 0.78463 0.15714584 5.3636e-06 9.9994e-01 weaklyHypermeth 1.4496e-04 1.0000e+00 weaklyHypermeth 1.7211e-03 0.99966644 weaklyHypermeth 4.9175e-02 1.000000 weaklyHypermeth 0.115886 6.9312e-02 lowCoverage 1.0000e+00 lowCoverage 0.94643 0.92290 0.0254851 4 0.94177 0.93963 0.0021469 3.0185e-01 4.1453e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.5623e-01 0.47876309 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0091399 0.7348866 lowCoverage 1.000000 lowCoverage 0.758347 0.92290 -0.1678717 4 0.78463 0.93963 -0.15499897 9.9999e-01 7.2673e-04 lowCoverage 1.0000e+00 1.8634e-02 lowCoverage 9.9987e-01 8.4797e-03 lowCoverage 1.0000000 2.4940e-01 lowCoverage -0.1250263 5.2943e-02 lowCoverage 1.00000000 lowCoverage chr14 100439376 100440376 130122 ENSG00000221077 0.801337 357 8 0.650398 322 10 0.74946 277 12 0.825499 269 7 0.862312 162 12 0.84874 478 6 0.838648 297 11 0.78822 254 10 0.8226761 225 9 0.939685 199 9 0.84024 368 11 0.768227 141 9 0.706407 252 11 0.859649 63 3 0.756772 253 11 0.773747 156 8 0.77350 71 4 0.87782 418 7 0.891983 304 6 0.70734 466 10 0.80898 156 11 0.539850 92 5 0.79876 209 7 0.74657 134 9 0.728125 60 5 0.80067 418 11 0.678779 181 9 0.72514 98 5 0.665588 280 8 0.626952 399 11 0.662549 476 11 0.89216 435 11 0.579354 337 10 0.694150 251 7 0.78078 256 8 0.821226 68 5 0.72727 238 11 0.54850 546 11 0.829604 493 8 0.81077 385 8 0.67457 283 8 0.72088 393 6 0.91516 348 10 0.80119 0.700254 0.71068 0.773067 0.863130 0.87039 0.832050 0.750941 0.797777 0.895986 0.85774 0.73839 0.6120465 0.787003 0.70997 0.628599 0.800462 0.82293 0.80477 0.728520 0.81268 0.630008 0.75709 0.787159 0.701661 0.794796 0.651129 0.834523 0.776364 0.565293 0.551244 0.87285 0.527166 0.693825 0.887768 0.581321 0.820862 0.372157 0.740794 0.81645 0.64963 0.71043 0.828721 6 0.79370 0.735785 0.05740283 10 0.80112 0.73753 0.0635821 0.00025571 0.97057044 weaklyHypermeth 0.25571 1.00000 insignificant 0.024591 0.99022992 weaklyHypermeth 1 1.000000 insignificant 0.0812889 0.019444 weaklyHypermeth 1 insignificant 0.79370 0.568142 0.2289771 10 0.80112 0.66537 0.1357440 1.8055e-13 8.4004e-01 hypermethylated 7.8501e-12 1.0000e+00 hypermethylated 8.7490e-03 8.9509e-01 weaklyHypermeth 1.7155e-01 1.000000 insignificant 0.1122542 5.2481e-02 insignificant 1.0000e+00 insignificant 0.79370 0.78076 0.0033233 8 0.80112 0.76252 0.0385944 4.7110e-02 6.0919e-02 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 6.1580e-01 3.3295e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0139326 7.6960e-01 insignificant 1.0000000 insignificant 0.735534 0.567807 0.168671 10 0.68080 0.61419 0.06661098 2.7501e-05 6.3021e-01 weaklyHypermeth 6.3955e-04 1.0000e+00 weaklyHypermeth 2.8850e-01 0.58200974 insignificant 1.0000e+00 1.000000 insignificant 0.030965 5.6792e-01 insignificant 1.0000e+00 insignificant 0.73578 0.78076 -0.0558345 8 0.73753 0.76252 -0.0249877 8.6532e-01 1.1401e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.2118e-01 0.09098219 insignificant 1.0000e+00 1.00000 insignificant -0.0673563 0.2204728 insignificant 1.000000 insignificant 0.568142 0.78076 -0.2453353 8 0.66537 0.76252 -0.09714964 9.9995e-01 2.6777e-05 hypomethylated 1.0000e+00 1.0299e-03 hypomethylated 9.9370e-01 1.2699e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0983215 1.4337e-01 insignificant 1.00000000 insignificant chr14 100939579 100940579 130141 ENSG00000206761 0.914721 96 6 0.833608 215 6 0.91569 166 6 0.796627 36 5 0.971429 107 6 0.84710 91 6 0.887239 170 6 0.88742 162 5 0.8517801 139 6 0.973163 169 6 0.93461 163 6 0.930014 111 5 0.871309 184 6 NA 0 0 0.898152 138 6 0.937559 73 4 0.81414 99 6 0.90675 27 3 0.923494 134 6 0.85942 115 6 0.92449 97 6 0.958333 17 1 0.89550 101 6 0.87667 74 3 1.000000 7 0 0.91740 164 6 0.824125 79 5 0.78285 77 4 0.815573 163 6 0.904000 283 6 0.907845 235 6 0.93201 161 6 0.829898 249 6 0.862728 158 6 0.85000 69 4 0.666667 18 2 0.78981 93 6 0.92687 264 6 0.826642 88 6 0.92958 97 6 0.92667 32 5 0.83285 43 5 0.96667 35 3 0.90079 0.846803 0.90573 0.784735 0.971790 0.83339 0.870732 0.871117 0.832348 0.967610 0.94314 0.92595 0.8927775 NA 0.90422 0.948772 0.786920 0.88984 0.93059 0.858730 0.92155 0.984177 0.87703 0.880506 0.991341 0.927150 0.825017 0.769535 0.833269 0.900539 0.913186 0.92487 0.804659 0.855154 0.827884 0.792956 0.773558 0.931523 0.839114 0.91839 0.92142 0.80814 0.959494 0 0.89979 0.921125 -0.02228696 6 0.89645 0.90560 -0.0091468 0.66786667 0.08170021 insignificant 1.00000 1.00000 insignificant 0.731272 0.08642210 insignificant 1 1.000000 insignificant -0.0025725 0.904675 lowCoverage 1 lowCoverage 0.89979 0.866040 0.0334993 6 0.89645 0.86143 0.0350270 1.0655e-01 9.6992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3816e-01 9.1124e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0713320 1.0672e-01 insignificant 1.0000e+00 insignificant 0.89979 0.89153 0.0015003 5 0.89645 0.89198 0.0044735 6.8376e-01 7.8015e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.9760e-01 5.5935e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0041546 8.9617e-01 insignificant 1.0000000 insignificant 0.921125 0.866040 0.056008 6 0.90560 0.86143 0.04417372 1.3626e-02 9.7996e-01 weaklyHypermeth 2.0963e-01 1.0000e+00 insignificant 6.6839e-02 0.97000154 insignificant 1.0000e+00 1.000000 insignificant 0.073904 1.0470e-01 lowCoverage 1.0000e+00 lowCoverage 0.92112 0.89153 0.0194667 5 0.90560 0.89198 0.0136203 2.4489e-01 9.0048e-01 insignificant 1.0000e+00 1.000000 insignificant 4.2560e-01 0.74658143 insignificant 1.0000e+00 1.00000 insignificant -0.0015821 0.9634276 lowCoverage 1.000000 lowCoverage 0.866040 0.89153 -0.0379032 5 0.86143 0.89198 -0.03055345 9.3520e-01 3.0294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7052e-01 1.7895e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0754865 1.3296e-01 insignificant 1.00000000 insignificant chr14 101038611 101039611 130147 ENSG00000206761 0.803409 106 4 0.740112 149 6 0.70861 94 6 0.843581 100 4 0.740430 56 4 0.88266 184 6 0.674560 70 6 0.86922 136 6 0.7974528 102 6 0.862573 61 6 0.83666 251 6 0.750712 36 3 0.917697 141 5 0.889514 79 4 0.669465 73 5 0.402105 44 3 0.56597 26 3 0.91261 106 4 0.876688 229 6 0.82938 144 6 0.90427 90 6 0.827835 52 5 0.88611 67 5 0.88856 120 5 0.931624 34 4 0.90573 225 6 0.847145 89 6 0.65417 64 5 0.926949 167 6 0.918066 213 6 0.877373 214 6 0.77442 127 5 0.599327 136 6 0.350532 94 5 0.52083 61 3 0.375000 19 1 0.57638 178 6 0.75820 220 6 0.817138 60 5 0.92004 74 5 0.89907 47 3 0.97614 43 2 0.82928 76 4 0.86887 0.715296 0.65199 0.865580 0.672343 0.85090 0.598143 0.862846 0.745083 0.778970 0.82743 0.59942 0.8788453 0.846863 0.64533 0.257808 0.527303 0.91182 0.88112 0.787032 0.93082 0.838793 0.84388 0.881609 0.882507 0.926596 0.840523 0.644150 0.912177 0.911148 0.884578 0.78866 0.554223 0.285200 0.283213 0.116776 0.395609 0.747530 0.886134 0.89158 0.90069 0.95317 0.855818 3 0.80476 0.876881 -0.07904746 6 0.82409 0.88223 -0.0581320 0.98746100 0.00453631 weaklyHypometh 1.00000 0.61913 insignificant 0.982350 0.00025892 weaklyHypometh 1 0.086306 weaklyHypometh -0.0831827 0.031346 lowCoverage 1 lowCoverage 0.80476 0.588983 0.2297806 6 0.82409 0.63898 0.1851184 2.8129e-07 1.0000e+00 hypermethylated 7.2125e-06 1.0000e+00 hypermethylated 7.2055e-05 9.9995e-01 hypermethylated 2.8822e-03 1.000000 hypermethylated 0.2486257 7.7458e-03 lowCoverage 2.4206e-01 lowCoverage 0.80476 0.89333 -0.0893058 4 0.82409 0.88826 -0.0641612 9.8340e-01 2.6893e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.9723e-01 3.7376e-04 lowCoverage 1.0000e+00 0.124588 lowCoverage -0.1096651 1.9783e-02 lowCoverage 0.9575288 lowCoverage 0.876881 0.588983 0.300948 6 0.88223 0.63898 0.24325042 4.6885e-10 1.0000e+00 hypermethylated 2.0772e-08 1.0000e+00 hypermethylated 1.2211e-06 0.99999473 hypermethylated 6.4269e-05 1.000000 hypermethylated 0.331808 1.9864e-03 lowCoverage 8.2765e-02 lowCoverage 0.87688 0.89333 -0.0038912 4 0.88223 0.88826 -0.0060291 6.3397e-01 3.0379e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5868e-01 0.08146101 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0264824 0.4963768 lowCoverage 1.000000 lowCoverage 0.588983 0.89333 -0.3450466 4 0.63898 0.88826 -0.24927957 9.9991e-01 4.1777e-05 lowCoverage 1.0000e+00 1.4920e-03 lowCoverage 9.9986e-01 7.4332e-05 lowCoverage 1.0000000 5.7179e-03 lowCoverage -0.3582908 1.1930e-03 lowCoverage 0.07108428 lowCoverage chr14 101054436 101055436 130148 ENSG00000206761 0.918447 764 14 0.772623 304 17 0.87823 217 12 0.906265 708 17 0.839903 137 7 0.91436 608 17 0.812407 184 14 0.90214 414 14 0.8391125 199 14 0.921297 180 14 0.86459 593 17 0.809147 135 11 0.929306 316 14 0.926535 101 7 0.821294 261 14 0.742146 83 4 0.74068 92 10 0.92271 955 17 0.932947 476 14 0.91426 516 16 0.78622 264 17 0.904112 220 14 0.79618 381 17 0.81396 177 12 0.871214 290 16 0.94346 431 17 0.819710 241 13 0.73077 116 11 0.922387 374 17 0.938690 476 17 0.871945 469 17 0.89448 664 17 0.086678 585 17 0.050443 444 17 0.10048 448 6 0.158939 233 14 0.28202 447 17 0.09658 833 17 0.840130 530 14 0.78598 775 17 0.85486 536 17 0.81865 626 14 0.88979 605 17 0.92376 0.808797 0.83409 0.926692 0.776055 0.89694 0.791914 0.885011 0.858077 0.877739 0.86730 0.77464 0.8926919 0.894744 0.79313 0.733635 0.791246 0.90461 0.90478 0.930657 0.81368 0.912731 0.87701 0.854324 0.891731 0.931094 0.883539 0.854864 0.918734 0.915513 0.910959 0.93176 0.082187 0.049676 0.060832 0.075718 0.211517 0.082575 0.874414 0.87653 0.91752 0.81665 0.877219 11 0.86979 0.896341 -0.03442090 14 0.86240 0.79277 0.0696253 0.92334775 0.14122692 insignificant 1.00000 1.00000 insignificant 0.798886 0.79933630 insignificant 1 1.000000 insignificant 0.0076605 0.754850 insignificant 1 insignificant 0.86985 0.083278 0.7845903 14 0.86655 0.16574 0.7008162 2.2909e-208 1.0000e+00 hypermethylated 2.2909e-205 1.0000e+00 hypermethylated 7.4617e-40 1.0000e+00 hypermethylated 7.4617e-37 1.000000 hypermethylated 0.7362307 2.1871e-07 hypermethylated 3.1244e-05 hypermethylated 0.86973 0.90723 -0.0068330 14 0.84274 0.74952 0.0932256 2.2605e-01 3.8932e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.1795e-01 8.1746e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0275394 2.4916e-01 insignificant 1.0000000 insignificant 0.897530 0.083305 0.814192 17 0.84133 0.17402 0.66730660 3.7105e-162 1.0000e+00 hypermethylated 3.7105e-159 1.0000e+00 hypermethylated 3.5319e-33 0.99999999 hypermethylated 3.5319e-30 1.000000 hypermethylated 0.728570 3.4452e-08 hypermethylated 1.1484e-05 hypermethylated 0.89668 0.90723 0.0228097 17 0.81079 0.74952 0.0612729 1.4402e-01 8.5335e-01 insignificant 1.0000e+00 1.000000 insignificant 2.0708e-01 0.98957859 insignificant 1.0000e+00 1.00000 insignificant 0.0198789 0.4608232 insignificant 1.000000 insignificant 0.083305 0.90752 -0.8014877 17 0.17402 0.78699 -0.61297008 1.0000e+00 4.4139e-92 hypomethylated 1.0000e+00 4.4139e-89 hypomethylated 1.0000e+00 2.7285e-20 hypomethylated 1.0000000 2.7285e-17 hypomethylated -0.7086912 1.8062e-07 hypomethylated 0.00018062 hypomethylated chr14 101069779 101070779 130150 ENSG00000206761 0.977143 95 5 0.854562 174 5 0.82887 108 5 1.000000 14 0 0.876190 48 5 0.81962 53 4 0.885942 67 5 0.72825 113 5 0.9080849 69 5 0.979808 105 5 0.73978 164 5 0.812121 33 5 0.943599 171 5 0.000000 1 0 0.911163 104 5 0.951282 35 5 0.91143 46 5 0.73810 21 1 0.966375 149 5 0.91602 52 5 0.90509 67 5 1.000000 9 0 0.79645 78 5 1.00000 42 3 1.000000 8 0 0.95635 188 5 0.977778 35 4 0.95000 19 2 0.919041 229 5 0.951664 204 5 0.925333 215 5 0.95109 123 5 0.642331 185 5 0.651194 168 5 1.00000 148 5 0.660000 19 1 0.67590 52 5 0.74671 175 5 0.869474 58 5 0.93522 104 5 1.00000 9 0 0.98000 52 5 1.00000 28 3 0.97090 0.870987 0.83999 1.000000 0.875661 0.84054 0.901771 0.886483 0.904221 0.974092 0.89377 0.83165 0.9517515 NA 0.92685 0.955484 0.919974 0.75661 0.97367 0.926527 0.92107 1.000000 0.96093 1.000000 1.000000 0.965394 0.975309 0.930556 0.931474 0.960493 0.940789 0.94341 0.683416 0.676984 1.000000 0.694444 0.697293 0.804636 0.893713 0.95053 1.00000 0.97778 1.000000 0 0.90870 0.955629 -0.04288158 5 0.75196 0.87051 -0.1185443 0.99998353 0.00040534 weaklyHypometh 1.00000 0.19507 insignificant 0.999999 0.00014267 weaklyHypometh 1 0.086306 weaklyHypometh -0.1069829 0.044970 lowCoverage 1 lowCoverage 0.90982 0.793842 0.1286965 5 0.90235 0.75821 0.1441394 4.1526e-06 9.9998e-01 weaklyHypermeth 8.6513e-05 1.0000e+00 weaklyHypermeth 8.6411e-04 9.9997e-01 weaklyHypermeth 2.3086e-02 1.000000 weaklyHypermeth 0.1080603 1.6678e-01 lowCoverage 1.0000e+00 lowCoverage 0.90982 0.93625 -0.0334552 5 0.90235 0.93239 -0.0300362 9.1356e-01 2.4476e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9977e-01 2.6789e-03 weaklyHypometh 1.0000e+00 0.267889 insignificant -0.1195212 3.6698e-02 lowCoverage 1.0000000 lowCoverage 0.956379 0.793842 0.158115 5 0.94461 0.75821 0.18639255 7.8785e-08 1.0000e+00 weaklyHypermeth 2.7167e-06 1.0000e+00 weaklyHypermeth 1.3224e-05 0.99999971 weaklyHypermeth 6.0109e-04 1.000000 weaklyHypermeth 0.215043 1.0882e-02 lowCoverage 3.5104e-01 lowCoverage 0.95638 0.93625 0.0102226 5 0.94461 0.93239 0.0122170 3.7893e-01 6.0343e-01 insignificant 1.0000e+00 1.000000 insignificant 9.5339e-01 0.29963786 insignificant 1.0000e+00 1.00000 insignificant -0.0125384 0.6848196 lowCoverage 1.000000 lowCoverage 0.793842 0.93625 -0.1767900 5 0.75821 0.93239 -0.17417555 9.9998e-01 1.3354e-03 weaklyHypometh 1.0000e+00 2.9029e-02 weaklyHypometh 1.0000e+00 1.3956e-04 weaklyHypometh 1.0000000 9.7453e-03 weaklyHypometh -0.2275815 8.0110e-03 lowCoverage 0.30811564 lowCoverage chr14 101083634 101084634 130152 ENSG00000206761 0.846131 362 9 0.823611 52 3 0.66970 77 9 0.969727 257 7 0.980020 29 2 0.82296 162 9 0.969697 23 1 0.88788 98 9 0.9200244 34 2 0.915695 96 9 0.95619 263 10 0.500000 11 1 0.915179 74 8 0.986111 59 6 0.979798 47 2 0.250000 9 1 0.66667 12 2 0.94820 600 7 0.953768 259 9 0.93751 210 9 0.88579 129 9 0.972222 60 7 0.70513 76 8 0.91667 152 9 0.928527 223 6 0.91334 185 9 0.954808 95 9 0.52778 9 0 0.925714 124 9 0.927919 169 9 0.931240 196 9 0.95833 220 10 0.816085 185 10 0.760775 299 9 0.79692 189 8 0.837500 72 7 0.86845 121 9 0.85374 406 9 0.958333 22 0 0.95939 280 8 0.96707 214 7 0.93750 212 7 0.89833 110 8 0.90800 0.939785 0.70699 0.955781 0.997519 0.86057 0.989247 0.930108 0.916873 0.919355 0.93489 0.62881 0.9366359 0.978361 1.00000 NA NA 0.94017 0.93618 0.911623 0.83503 0.964158 0.94892 1.000000 0.943487 0.933878 0.982527 NA 0.968356 0.898846 0.945748 0.95221 0.858032 0.800169 0.867042 0.778972 0.856951 0.843829 0.935449 0.95576 0.95210 0.93146 0.936902 0 0.91877 0.933985 -0.01739688 9 0.88493 0.89891 -0.0139843 0.97660889 0.15791290 insignificant 1.00000 1.00000 insignificant 0.907974 0.37548639 insignificant 1 1.000000 insignificant -0.0340125 0.553301 insignificant 1 insignificant 0.91933 0.835692 0.0794894 9 0.90477 0.80618 0.0985892 6.0126e-06 7.7507e-01 weaklyHypermeth 1.2271e-04 1.0000e+00 weaklyHypermeth 1.1901e-02 7.6587e-01 weaklyHypermeth 2.2886e-01 1.000000 insignificant 0.0226976 6.2197e-01 insignificant 1.0000e+00 insignificant 0.91877 0.94988 -0.0243223 7 0.88493 0.94812 -0.0631946 8.8724e-01 2.2021e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 8.6583e-01 5.0513e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0991816 3.5549e-02 weaklyHypometh 1.0000000 insignificant 0.934969 0.835692 0.102547 9 0.92002 0.80618 0.11384479 3.9395e-05 8.4840e-01 weaklyHypermeth 8.9534e-04 1.0000e+00 weaklyHypermeth 3.7415e-03 0.65309452 weaklyHypermeth 1.0112e-01 1.000000 insignificant 0.056710 1.8702e-01 insignificant 1.0000e+00 insignificant 0.93399 0.94988 -0.0047801 7 0.89891 0.94812 -0.0492103 8.7294e-01 1.9012e-01 insignificant 1.0000e+00 1.000000 insignificant 9.2579e-01 0.22114611 insignificant 1.0000e+00 1.00000 insignificant -0.0651692 0.1237408 insignificant 1.000000 insignificant 0.835692 0.94982 -0.1003819 7 0.80618 0.94340 -0.13722577 9.9674e-01 6.9180e-03 weaklyHypometh 1.0000e+00 1.2578e-01 insignificant 9.9545e-01 1.8810e-02 weaklyHypometh 1.0000000 4.5697e-01 insignificant -0.1218792 2.2572e-04 weaklyHypometh 0.02257163 weaklyHypometh chr14 103820736 103821736 130170 KIF26A ENSG00000066735 0.832665 144 4 0.606061 18 2 0.71429 7 1 0.907164 129 4 0.858333 17 2 0.92938 84 5 0.875000 30 2 0.43750 9 1 0.5000000 5 0 0.979167 18 1 0.90000 29 2 1.000000 12 1 1.000000 13 1 0.404762 22 1 0.454545 23 1 1.000000 2 0 NA 0 0 0.71889 176 5 0.831884 86 2 0.75167 68 5 0.82143 19 2 0.312500 9 1 0.83333 39 1 1.00000 6 1 0.500000 12 1 0.96000 46 4 0.536232 25 1 0.88889 10 1 0.680000 30 2 0.666667 3 0 0.797619 25 1 0.67992 45 4 0.500000 33 2 0.000000 2 0 0.33333 6 0 0.843320 60 4 0.25397 27 1 0.58858 76 4 0.719498 137 4 0.83906 125 5 0.96471 66 4 0.90078 246 4 0.81946 116 5 0.78049 1.000000 0.71429 0.885714 0.800000 0.96667 0.800000 0.875000 1.000000 1.000000 1.00000 1.00000 1.0000000 0.000000 0.00000 1.000000 NA 0.71429 0.66667 0.625000 1.00000 0.000000 0.66667 1.000000 1.000000 0.840000 0.000000 1.000000 0.600000 0.666667 0.785714 0.75000 0.636364 0.000000 NA 0.947368 0.428571 0.379310 0.692308 0.80556 0.82353 0.76923 0.657143 0 0.86083 0.798507 0.05623115 2 0.75169 0.76380 -0.0121096 0.24063961 0.90731734 lowCoverage 1.00000 1.00000 lowCoverage 0.282364 0.75987495 lowCoverage 1 1.000000 lowCoverage 0.0507035 0.502899 lowCoverage 1 lowCoverage 0.86083 0.608911 0.2359205 3 0.75169 0.52719 0.2244942 1.8856e-07 9.8531e-01 lowCoverage 4.9622e-06 1.0000e+00 lowCoverage 1.3330e-02 9.9580e-01 lowCoverage 2.5151e-01 1.000000 lowCoverage 0.3538864 2.9480e-02 lowCoverage 7.0189e-01 lowCoverage 0.86554 0.86735 0.0266235 5 0.86869 0.86111 0.0075830 2.2728e-01 2.3047e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.7135e-01 4.6725e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0749459 2.4563e-01 lowCoverage 1.0000000 lowCoverage 0.798507 0.608911 0.250359 1 0.76380 0.52719 0.23660381 1.2842e-02 9.4739e-01 lowCoverage 2.0384e-01 1.0000e+00 lowCoverage 4.7342e-02 0.99948239 lowCoverage 7.7609e-01 1.000000 lowCoverage 0.303183 5.3705e-02 lowCoverage 1.0000e+00 lowCoverage 0.80150 0.86754 0.0056148 2 0.84713 0.88426 -0.0371268 8.9767e-01 4.6030e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.3842e-01 0.91716061 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1256494 0.0988234 lowCoverage 1.000000 lowCoverage 0.616915 0.86647 -0.2151884 3 0.61053 0.82870 -0.21817504 8.3157e-01 1.2975e-03 lowCoverage 1.0000e+00 2.9029e-02 lowCoverage 9.4107e-01 5.7926e-02 lowCoverage 1.0000000 9.8180e-01 lowCoverage -0.4288323 1.3876e-02 lowCoverage 0.46227455 lowCoverage chr14 103851972 103852972 130171 KIF26A ENSG00000066735 0.817208 490 10 0.662346 348 10 0.62121 317 10 0.919300 365 10 0.739578 193 10 0.74085 728 10 0.699782 319 10 0.96222 298 10 0.9109722 201 10 0.782573 241 10 0.79470 473 10 0.757299 218 10 0.760310 340 10 0.864740 175 6 0.887920 369 10 0.817196 81 7 0.73636 35 5 0.87046 621 10 0.806553 431 10 0.83707 521 10 0.86846 138 9 0.715466 135 8 0.80031 305 10 0.78594 222 10 0.841608 143 8 0.73054 509 10 0.640205 289 10 0.87232 204 10 0.852925 581 10 0.764786 246 10 0.710085 554 11 0.80774 524 10 0.480986 334 10 0.530630 307 10 0.42649 664 10 0.569517 92 8 0.50150 331 11 0.52763 503 10 0.881059 490 10 0.82115 565 10 0.87122 311 10 0.84959 648 10 0.87333 473 10 0.90314 0.748070 0.79712 0.913709 0.795004 0.89853 0.917220 0.940947 0.902398 0.947484 0.87004 0.90210 0.9233158 0.874362 0.90321 0.919891 0.863735 0.87305 0.88753 0.911113 0.92885 0.817060 0.90722 0.884746 0.931743 0.955958 0.814412 0.954906 0.878855 0.907937 0.907863 0.89554 0.506653 0.573396 0.485602 0.612551 0.648945 0.549381 0.886570 0.89974 0.86651 0.91820 0.900375 10 0.88365 0.890621 -0.01102206 10 0.70897 0.71857 -0.0096033 0.90677994 0.01356833 weaklyHypometh 1.00000 1.00000 insignificant 0.965329 0.04881659 weaklyHypometh 1 1.000000 insignificant 0.0169007 0.561630 insignificant 1 insignificant 0.88365 0.567010 0.3066517 10 0.70897 0.45286 0.2561067 9.6938e-50 8.3405e-01 hypermethylated 1.9388e-47 1.0000e+00 hypermethylated 3.2968e-17 9.6411e-01 hypermethylated 1.0989e-14 1.000000 hypermethylated 0.2933086 2.0765e-08 hypermethylated 4.1530e-06 hypermethylated 0.88365 0.90149 -0.0165582 10 0.70897 0.81150 -0.1025291 9.6162e-01 1.7613e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 8.7394e-01 1.7847e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0598354 1.4210e-02 weaklyHypometh 0.7894683 insignificant 0.890621 0.567010 0.321896 10 0.71857 0.45286 0.26571001 1.7287e-36 1.0000e+00 hypermethylated 4.3217e-34 1.0000e+00 hypermethylated 5.7960e-16 0.99999954 hypermethylated 1.9320e-13 1.000000 hypermethylated 0.276408 1.5160e-07 hypermethylated 3.0320e-05 hypermethylated 0.89062 0.90149 -0.0043452 10 0.71857 0.81150 -0.0929258 8.0768e-01 3.8220e-01 insignificant 1.0000e+00 1.000000 insignificant 6.4082e-01 0.45333251 insignificant 1.0000e+00 1.00000 insignificant -0.0767361 0.0054430 weaklyHypometh 0.565356 insignificant 0.567010 0.90149 -0.3335412 10 0.45286 0.81150 -0.35863580 1.0000e+00 1.8983e-19 hypomethylated 1.0000e+00 3.1638e-17 hypomethylated 1.0000e+00 2.8401e-11 hypomethylated 1.0000000 1.4200e-08 hypomethylated -0.3531440 5.4225e-07 hypomethylated 0.00027112 hypomethylated chr14 104130453 104131453 130177 C14orf180 ENSG00000184601 0.814136 403 16 0.784987 418 17 0.58851 256 14 0.883505 368 16 0.859862 163 13 0.78875 532 17 0.609454 164 12 0.80691 322 14 0.6787544 208 12 0.817042 251 13 0.78948 491 16 0.717704 105 10 0.842985 395 14 0.860336 95 6 0.808538 246 13 0.551672 86 6 0.73182 39 2 0.74472 560 16 0.797775 342 14 0.78102 443 17 0.86758 248 16 0.663787 250 13 0.63892 295 15 0.81814 167 8 0.774330 353 12 0.83806 431 15 0.633799 256 11 0.54335 87 8 0.799544 331 15 0.849652 260 15 0.851701 447 16 0.92788 553 18 0.239856 459 16 0.290647 461 18 0.16141 673 15 0.251289 253 16 0.38895 288 15 0.35404 671 18 0.541487 292 16 0.51059 385 18 0.58675 255 13 0.37137 303 15 0.72601 263 13 0.87213 0.841410 0.72371 0.878431 0.827796 0.85918 0.762110 0.898618 0.869201 0.899767 0.86335 0.76200 0.9045884 0.829799 0.86029 0.466051 0.755220 0.80986 0.91214 0.880291 0.91829 0.704296 0.83381 0.906134 0.858355 0.923204 0.829417 0.730089 0.810183 0.894635 0.883875 0.91131 0.265506 0.370431 0.244969 0.154849 0.325206 0.182255 0.674583 0.53341 0.71566 0.45199 0.791679 6 0.83702 0.849714 -0.01908906 16 0.73420 0.74045 -0.0062512 0.96135498 0.09571961 insignificant 1.00000 1.00000 insignificant 0.984394 0.12724225 insignificant 1 1.000000 insignificant -0.0043298 0.914655 insignificant 1 insignificant 0.83702 0.224643 0.5908195 16 0.73420 0.30092 0.4332768 4.0339e-111 1.0000e+00 hypermethylated 2.0169e-108 1.0000e+00 hypermethylated 3.4924e-31 1.0000e+00 hypermethylated 1.7462e-28 1.000000 hypermethylated 0.4818660 5.8294e-07 hypermethylated 7.2867e-05 hypermethylated 0.83739 0.58985 0.2322397 15 0.78031 0.52370 0.2566119 4.4388e-36 1.0000e+00 hypermethylated 4.4388e-33 1.0000000 hypermethylated 1.1367e-11 9.9994e-01 hypermethylated 1.1367e-08 1.000000 hypermethylated 0.2156567 1.6157e-02 weaklyHypermeth 0.8503621 insignificant 0.849606 0.224920 0.602718 17 0.74085 0.33005 0.41079765 1.2015e-84 1.0000e+00 hypermethylated 6.0075e-82 1.0000e+00 hypermethylated 5.6750e-26 0.99999999 hypermethylated 2.8375e-23 1.000000 hypermethylated 0.486196 8.3593e-08 hypermethylated 2.0898e-05 hypermethylated 0.85052 0.58985 0.2586257 16 0.76811 0.52370 0.2444109 2.4262e-28 1.0000e+00 hypermethylated 2.4262e-25 1.000000 hypermethylated 8.2727e-12 0.99999211 hypermethylated 8.2727e-09 1.00000 hypermethylated 0.2199864 0.0131693 weaklyHypermeth 0.823084 insignificant 0.224964 0.58945 -0.3333428 17 0.32596 0.49990 -0.17393253 1.0000e+00 4.1781e-17 hypomethylated 1.0000e+00 5.9687e-15 hypomethylated 1.0000e+00 1.4073e-08 hypomethylated 1.0000000 3.5182e-06 hypomethylated -0.2662094 5.8367e-03 weaklyHypometh 0.25376988 insignificant chr14 104628679 104629679 130179 GPR132 ENSG00000183484 0.708702 235 6 0.591115 139 6 0.81916 137 8 0.897377 264 6 0.736623 68 6 0.83936 161 8 0.647917 93 8 0.64457 106 8 0.8545038 142 6 0.916667 141 8 0.92842 135 8 0.875000 44 2 0.534525 131 4 0.595725 65 5 0.722438 105 6 0.670833 21 1 0.61143 27 4 0.79199 252 6 0.719451 83 6 0.89613 156 6 0.89230 55 5 0.840365 148 8 0.71805 133 10 0.77063 109 6 0.816882 328 8 0.85214 134 8 0.808312 101 6 0.58352 142 6 0.849659 97 6 0.734392 72 4 0.771569 165 8 0.88260 212 6 0.299925 139 8 0.365718 136 6 0.60317 53 5 0.078941 259 8 0.41985 117 6 0.35679 204 8 0.680500 189 8 0.70317 211 8 0.83693 163 6 0.64233 188 6 0.75492 225 6 0.78966 0.618173 0.80533 0.832865 0.866265 0.78548 0.767276 0.748598 0.713638 0.870081 0.86238 0.77561 0.6663881 0.782522 0.82254 0.826664 0.546428 0.76282 0.74664 0.809755 0.86742 0.728640 0.80304 0.777510 0.841660 0.793728 0.768045 0.699385 0.704675 0.745121 0.680210 0.84593 0.170273 0.150695 0.272954 0.091243 0.365392 0.236602 0.782078 0.80206 0.74630 0.75608 0.684104 4 0.77565 0.807783 0.00083174 6 0.64614 0.63355 0.0125892 0.59564817 0.31955700 insignificant 1.00000 1.00000 insignificant 0.487607 0.62061178 insignificant 1 1.000000 insignificant -0.0432703 0.253605 insignificant 1 insignificant 0.78189 0.279736 0.5671540 6 0.71075 0.35103 0.3597179 6.0590e-56 9.9893e-01 hypermethylated 1.5147e-53 1.0000e+00 hypermethylated 1.0670e-13 9.9985e-01 hypermethylated 2.1339e-11 1.000000 hypermethylated 0.3960314 1.3305e-03 weaklyHypermeth 7.0026e-02 weaklyHypermeth 0.77565 0.73668 0.0213638 6 0.64614 0.64144 0.0046996 4.1749e-01 8.4704e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4959e-01 3.3388e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0265290 5.5586e-01 insignificant 1.0000000 insignificant 0.810907 0.279736 0.562002 8 0.67468 0.35103 0.32364754 8.9539e-40 1.0000e+00 hypermethylated 2.9846e-37 1.0000e+00 hypermethylated 5.2406e-11 0.99999997 hypermethylated 8.7344e-09 1.000000 hypermethylated 0.439302 8.4004e-04 hypermethylated 4.6669e-02 hypermethylated 0.80778 0.73668 0.0210631 6 0.63355 0.64144 -0.0078896 6.2494e-01 7.2935e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8474e-01 0.86429680 insignificant 1.0000e+00 1.00000 insignificant 0.0697993 0.1313637 insignificant 1.000000 insignificant 0.279736 0.73868 -0.5429866 6 0.35103 0.68058 -0.32954827 1.0000e+00 3.9669e-22 hypomethylated 1.0000e+00 9.9171e-20 hypomethylated 9.9980e-01 2.7713e-07 hypomethylated 1.0000000 4.6189e-05 hypomethylated -0.3695024 1.9105e-03 weaklyHypometh 0.10613791 insignificant chr15 18538540 18539540 130187 ENSG00000188403 0.872494 683 16 0.745640 457 15 0.76093 373 20 0.866604 483 16 0.784953 230 15 0.84262 784 15 0.796128 278 12 0.83741 258 13 0.7696636 285 13 0.766159 309 14 0.85882 590 16 0.781175 133 11 0.828993 440 13 0.836412 192 10 0.841296 319 14 0.849405 91 9 0.63602 50 5 0.82807 759 19 0.825849 485 13 0.84400 828 14 0.87162 206 15 0.813962 285 9 0.83370 533 19 0.86064 151 12 0.870545 183 7 0.89002 580 15 0.799933 313 14 0.61301 108 8 0.808011 557 16 0.822035 417 16 0.796863 696 19 0.87204 863 15 0.633534 522 16 0.574231 448 13 0.64549 518 13 0.579363 115 7 0.61061 269 12 0.77022 716 15 0.695550 786 14 0.80448 714 16 0.77602 710 17 0.79516 1039 14 0.87054 609 19 0.84087 0.738816 0.72745 0.849634 0.824387 0.83891 0.757730 0.762895 0.799715 0.845456 0.87857 0.83504 0.7919069 0.839684 0.88529 0.830023 0.733067 0.85319 0.88830 0.844977 0.87140 0.801141 0.85245 0.857069 0.895371 0.836186 0.797714 0.648853 0.781739 0.826584 0.813050 0.87972 0.641882 0.560520 0.626708 0.557371 0.682728 0.704572 0.768698 0.77032 0.80222 0.83319 0.839656 8 0.82579 0.818609 0.00433233 14 0.79151 0.81096 -0.0194516 0.22326920 0.39329589 insignificant 1.00000 1.00000 insignificant 0.810233 0.45898273 insignificant 1 1.000000 insignificant -0.0123979 0.618211 insignificant 1 insignificant 0.82651 0.665379 0.1564932 14 0.82369 0.68361 0.1400741 3.6792e-31 1.0000e+00 weaklyHypermeth 3.0660e-29 1.0000e+00 weaklyHypermeth 1.6280e-13 1.0000e+00 weaklyHypermeth 2.7133e-11 1.000000 weaklyHypermeth 0.1730583 1.0191e-03 weaklyHypermeth 5.6618e-02 weaklyHypermeth 0.82652 0.81104 0.0334191 12 0.82449 0.76451 0.0599836 4.3201e-06 9.8969e-01 weaklyHypermeth 3.9274e-04 1.0000000 weaklyHypermeth 7.2543e-03 9.8047e-01 weaklyHypermeth 5.5802e-01 1.000000 insignificant 0.0202818 5.3539e-01 insignificant 1.0000000 insignificant 0.818517 0.665379 0.153330 14 0.83064 0.68361 0.14702675 7.8973e-21 9.9999e-01 weaklyHypermeth 6.0749e-19 1.0000e+00 weaklyHypermeth 2.4421e-11 0.99999982 weaklyHypermeth 4.8842e-09 1.000000 weaklyHypermeth 0.185456 4.0549e-04 weaklyHypermeth 2.3852e-02 weaklyHypermeth 0.81878 0.81104 0.0303810 12 0.84475 0.76451 0.0802457 3.2589e-04 9.8247e-01 weaklyHypermeth 2.7158e-02 1.000000 weaklyHypermeth 1.3323e-02 0.99811839 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0326797 0.3774349 insignificant 1.000000 insignificant 0.665379 0.81056 -0.1116481 12 0.68361 0.74878 -0.06516781 9.9662e-01 1.2067e-05 weaklyHypometh 1.0000e+00 5.0278e-04 weaklyHypometh 9.9918e-01 5.8838e-04 weaklyHypometh 1.0000000 2.6745e-02 weaklyHypometh -0.1527765 4.5215e-03 weaklyHypometh 0.20552227 insignificant chr15 18669417 18670417 130200 ENSG00000203613 0.908786 418 16 0.785241 278 16 0.73712 193 12 0.854953 272 15 0.758125 179 12 0.85313 303 14 0.744343 140 10 0.75065 282 14 0.8276062 202 14 0.811328 271 13 0.88855 541 16 0.667144 100 7 0.771556 323 13 0.589150 81 4 0.916276 230 12 0.885002 87 7 0.92857 68 7 0.78470 294 15 0.843692 353 16 0.89015 339 13 0.89606 123 11 0.854546 143 11 0.80721 249 16 0.75720 125 10 0.880568 199 9 0.84441 276 14 0.826001 301 14 0.87871 58 4 0.819147 282 13 0.818009 301 16 0.833579 302 16 0.80444 545 16 0.672966 252 13 0.835758 400 16 0.79650 317 16 0.872733 118 13 0.81874 131 8 0.84885 296 16 0.858428 206 15 0.80150 396 16 0.81037 237 14 0.91763 229 16 0.88746 284 15 0.91362 0.844696 0.77562 0.893443 0.845173 0.88608 0.759147 0.817377 0.814624 0.867178 0.87914 0.90473 0.8665570 0.885359 0.89642 0.871344 0.962802 0.87940 0.86489 0.916781 0.88040 0.888180 0.91551 0.856645 0.934877 0.866009 0.854507 0.858832 0.826136 0.874355 0.879802 0.84349 0.829758 0.817220 0.758411 0.849749 0.750271 0.858279 0.874217 0.94639 0.87772 0.91778 0.885802 5 0.86210 0.861915 0.00253130 14 0.82088 0.81963 0.0012548 0.66813526 0.91637968 insignificant 1.00000 1.00000 insignificant 0.831739 0.63955379 insignificant 1 1.000000 insignificant -0.0251852 0.274534 insignificant 1 insignificant 0.86229 0.822325 0.0394005 16 0.82461 0.82593 -0.0013150 2.1986e-03 5.8982e-01 weaklyHypermeth 3.4899e-02 1.0000e+00 weaklyHypermeth 6.5985e-02 5.5316e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0022134 9.5076e-01 insignificant 1.0000e+00 insignificant 0.86229 0.89349 -0.0359860 16 0.82461 0.85269 -0.0280802 9.9981e-01 1.6424e-03 weaklyHypometh 1.0000e+00 0.4106114 insignificant 9.8956e-01 1.4897e-02 weaklyHypometh 1.0000e+00 0.993142 insignificant -0.0452729 1.5399e-01 insignificant 1.0000000 insignificant 0.861867 0.822325 0.038643 14 0.81013 0.82593 -0.01579373 1.9875e-02 6.3957e-01 weaklyHypermeth 2.9663e-01 1.0000e+00 insignificant 8.8306e-02 0.74618340 insignificant 1.0000e+00 1.000000 insignificant 0.027399 4.0843e-01 insignificant 1.0000e+00 insignificant 0.86187 0.89349 -0.0387188 14 0.81013 0.85269 -0.0425590 9.9994e-01 2.8186e-04 weaklyHypometh 1.0000e+00 0.140932 insignificant 9.9382e-01 0.06224175 insignificant 1.0000e+00 1.00000 insignificant -0.0200877 0.4490195 insignificant 1.000000 insignificant 0.822325 0.89349 -0.0729124 16 0.82593 0.85269 -0.02676524 9.9453e-01 7.0340e-04 weaklyHypometh 1.0000e+00 1.8511e-02 weaklyHypometh 9.6437e-01 1.6418e-02 weaklyHypometh 1.0000000 4.2099e-01 insignificant -0.0474863 2.2577e-01 insignificant 1.00000000 insignificant chr15 18722167 18723167 130206 ENSG00000203613 0.725785 118 6 0.807326 72 5 0.68651 52 4 0.724412 112 5 0.565518 74 6 0.55161 76 5 0.757937 56 6 0.86176 77 6 0.8402778 32 3 0.692460 44 5 0.83926 118 5 0.743056 23 3 0.806530 86 6 0.706650 50 6 0.675794 54 5 0.888889 21 1 1.00000 3 0 0.74454 139 5 0.771429 31 3 0.85000 41 5 0.50000 13 2 0.833333 15 0 0.61038 65 3 0.83333 13 0 0.815385 64 2 0.68750 52 3 0.935556 30 2 1.00000 2 0 0.866162 79 6 0.650000 69 3 0.773148 57 5 0.66389 54 5 0.637329 93 6 0.835238 44 5 0.75045 48 5 0.500000 5 0 0.57302 40 6 0.78571 37 5 0.562778 78 5 0.82516 108 5 0.76682 105 6 0.62203 65 3 0.78602 68 5 0.78215 0.797401 0.68084 0.771393 0.674085 0.71800 0.825964 0.858403 0.865079 0.713152 0.81938 0.83730 0.8421749 0.730159 0.76009 0.825397 0.873800 0.79543 0.76276 0.823810 0.75600 0.880952 0.64352 0.880952 0.825092 0.742560 0.903704 0.906796 0.884921 0.797619 0.773148 0.74167 0.656148 0.781066 0.711580 0.796568 0.546032 0.801020 0.760556 0.85195 0.82574 0.80640 0.811557 0 0.75997 0.764133 -0.00346824 5 0.74903 0.74325 0.0057763 0.60772964 0.53402936 insignificant 1.00000 1.00000 insignificant 0.698539 0.37426855 insignificant 1 1.000000 insignificant -0.0020701 0.966086 lowCoverage 1 lowCoverage 0.75997 0.685393 0.0796535 5 0.74903 0.68592 0.0631134 1.4919e-05 6.5788e-01 weaklyHypermeth 2.9253e-04 1.0000e+00 weaklyHypermeth 4.9066e-03 8.7094e-01 weaklyHypermeth 9.8131e-02 1.000000 weaklyHypermeth 0.0816951 2.0499e-01 lowCoverage 1.0000e+00 lowCoverage 0.75997 0.79245 -0.0083008 5 0.74903 0.68626 0.0627751 9.0616e-02 2.6517e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.5285e-01 4.6977e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0494254 4.1277e-01 lowCoverage 1.0000000 lowCoverage 0.764133 0.685393 0.074194 5 0.74325 0.68592 0.05733705 3.5465e-03 4.9425e-01 weaklyHypermeth 5.9109e-02 1.0000e+00 weaklyHypermeth 1.8646e-02 0.92323585 weaklyHypermeth 3.5858e-01 1.000000 insignificant 0.083765 2.4268e-01 lowCoverage 1.0000e+00 lowCoverage 0.76413 0.79245 0.0120227 5 0.74325 0.68626 0.0569987 4.7321e-01 6.6305e-01 insignificant 1.0000e+00 1.000000 insignificant 4.0142e-01 0.89662690 insignificant 1.0000e+00 1.00000 insignificant 0.0514954 0.4524645 lowCoverage 1.000000 lowCoverage 0.685393 0.79245 -0.0746672 5 0.68592 0.68626 -0.00033832 4.6930e-01 6.2563e-03 weaklyHypometh 1.0000e+00 1.1804e-01 insignificant 7.5152e-01 1.0764e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0322698 6.7225e-01 lowCoverage 1.00000000 lowCoverage chr15 28176578 28177578 130430 ENSG00000221250 0.452436 202 5 0.400010 165 5 0.40531 199 6 0.442593 179 5 0.395363 74 5 0.35438 247 6 0.419438 141 5 0.34642 138 5 0.4009360 137 5 0.356073 113 5 0.37703 173 5 0.268571 101 5 0.365592 176 5 NA 0 0 0.410221 158 5 0.428879 88 4 0.28495 123 5 0.26682 196 5 0.309145 107 5 0.39636 231 6 0.54067 45 3 0.189157 142 4 0.44062 202 5 0.39589 82 5 0.272000 78 4 0.40426 214 5 0.398141 116 5 0.40873 71 5 0.397721 115 5 0.392769 253 5 0.362631 195 5 0.51079 271 6 0.336681 166 6 0.213767 126 5 0.37407 113 5 0.177778 67 4 0.42035 106 5 0.34580 155 5 0.372634 263 4 0.28024 220 5 0.22655 220 4 0.40201 226 5 0.29188 279 4 0.22086 0.188032 0.23218 0.220254 0.289964 0.18247 0.274594 0.188129 0.198121 0.240145 0.30682 0.19789 0.1587727 NA 0.21220 0.239802 0.191217 0.20248 0.23296 0.208230 0.31282 0.137654 0.25494 0.207322 0.194317 0.196232 0.183579 0.166579 0.183821 0.192643 0.203364 0.31753 0.150404 0.123529 0.124313 0.101681 0.181264 0.138864 0.168203 0.17214 0.13819 0.19181 0.213829 4 0.24186 0.258969 -0.00377985 5 0.39079 0.41028 -0.0194873 0.77737126 0.14787568 insignificant 1.00000 1.00000 insignificant 0.375838 0.46313650 insignificant 1 1.000000 insignificant -0.0201218 0.509480 lowCoverage 1 lowCoverage 0.24186 0.199181 0.0586658 5 0.39079 0.34287 0.0479185 5.0867e-05 2.7026e-01 weaklyHypermeth 9.5975e-04 1.0000e+00 weaklyHypermeth 3.7072e-04 7.2320e-01 weaklyHypermeth 1.1234e-02 1.000000 weaklyHypermeth 0.0612526 1.8299e-01 lowCoverage 1.0000e+00 lowCoverage 0.24186 0.23344 0.0232182 5 0.39079 0.39834 -0.0075506 1.4883e-01 2.5555e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.6614e-02 5.6169e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0579971 1.4932e-01 lowCoverage 1.0000000 lowCoverage 0.258969 0.199181 0.069471 5 0.41028 0.34287 0.06740585 8.2068e-05 6.8566e-01 weaklyHypermeth 1.7841e-03 1.0000e+00 weaklyHypermeth 6.2854e-04 0.92752593 weaklyHypermeth 2.0951e-02 1.000000 weaklyHypermeth 0.081374 1.1532e-01 lowCoverage 1.0000e+00 lowCoverage 0.25897 0.23344 0.0228412 5 0.41028 0.39834 0.0119367 2.2751e-01 8.3779e-01 insignificant 1.0000e+00 1.000000 insignificant 1.6059e-01 0.87354752 insignificant 1.0000e+00 1.00000 insignificant 0.0781189 0.0915096 lowCoverage 1.000000 lowCoverage 0.199181 0.23344 -0.0480826 5 0.34287 0.39834 -0.05546913 6.0165e-01 3.5411e-04 weaklyHypometh 1.0000e+00 9.8364e-03 weaklyHypometh 6.5211e-01 4.0249e-03 weaklyHypometh 1.0000000 1.4375e-01 insignificant -0.0032555 9.4975e-01 lowCoverage 1.00000000 lowCoverage chr15 28545944 28546944 130449 ENSG00000196102 0.651515 62 5 0.572456 95 5 0.65556 38 5 0.794286 73 5 0.615873 41 5 0.53840 61 5 0.500000 29 2 0.79368 78 5 0.7600000 19 3 0.658333 39 3 0.76600 87 5 0.400000 11 0 0.670833 56 5 0.876190 25 3 0.687169 41 5 0.666667 6 0 1.00000 1 0 0.88992 62 3 0.627778 30 2 0.48247 33 4 0.50000 6 0 0.975000 51 2 0.69231 38 2 0.63889 18 2 0.823148 56 5 0.60467 60 5 0.733333 17 2 1.00000 4 0 0.866667 42 5 0.807500 70 5 0.782494 73 5 0.75098 66 5 0.584091 57 5 0.603636 51 5 0.86667 73 5 0.700000 22 2 0.73333 22 4 0.56944 55 5 0.705051 69 5 0.79428 116 5 0.77885 102 5 0.66667 17 0 0.81594 78 5 0.68223 0.601292 0.63964 0.786873 0.679537 0.66362 0.689189 0.802987 0.805405 0.802703 0.70387 0.42342 0.8130631 0.907336 0.63985 0.734379 NA 0.79530 0.69294 0.596686 0.87553 0.966216 0.69906 0.810811 0.801502 0.756282 0.747748 0.875528 0.855856 0.816892 0.767622 0.80970 0.686241 0.610319 0.875676 0.716216 0.771171 0.713964 0.724543 0.77532 0.81608 0.74775 0.796123 0 0.71088 0.794000 -0.07126354 5 0.69163 0.71797 -0.0263400 0.97460561 0.01552445 weaklyHypometh 1.00000 1.00000 insignificant 0.993197 0.01620679 weaklyHypometh 1 1.000000 insignificant -0.0842259 0.128680 lowCoverage 1 lowCoverage 0.71088 0.717857 -0.0063915 5 0.69163 0.64985 0.0417863 5.7868e-01 5.5885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0889e-01 5.8231e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0041612 9.4333e-01 lowCoverage 1.0000e+00 lowCoverage 0.71088 0.78796 -0.0576233 5 0.69163 0.78980 -0.0981647 9.7464e-01 6.8068e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.5343e-01 1.4313e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0718003 1.1869e-01 lowCoverage 1.0000000 lowCoverage 0.794000 0.717857 0.066764 5 0.71797 0.64985 0.06812625 1.7753e-02 9.7837e-01 weaklyHypermeth 2.6898e-01 1.0000e+00 insignificant 2.0425e-02 0.99467736 weaklyHypermeth 3.7137e-01 1.000000 insignificant 0.088387 1.8341e-01 lowCoverage 1.0000e+00 lowCoverage 0.79400 0.78796 0.0084591 5 0.71797 0.78980 -0.0718247 5.6278e-01 5.4133e-01 insignificant 1.0000e+00 1.000000 insignificant 3.8670e-01 0.70372806 insignificant 1.0000e+00 1.00000 insignificant 0.0124256 0.8098358 lowCoverage 1.000000 lowCoverage 0.717857 0.78796 -0.0461254 5 0.64985 0.78980 -0.13995098 8.4908e-01 8.4345e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1685e-01 1.8656e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0759615 2.0144e-01 lowCoverage 1.00000000 lowCoverage chr15 30619748 30620748 130505 ENSG00000215302 0.690476 48 5 0.578307 104 5 0.67500 27 3 0.715608 59 5 0.663889 26 4 0.72727 54 5 0.642857 39 5 0.66667 51 5 0.6000000 19 2 0.533333 24 3 0.66838 86 5 0.625000 16 0 0.794444 35 3 0.800000 12 1 0.866667 15 0 1.000000 1 0 0.25000 4 0 0.73169 73 3 0.617845 51 5 0.63468 55 5 0.00000 3 0 0.871282 40 5 0.73333 32 2 0.56667 15 2 0.604167 57 2 0.60000 69 3 0.375000 6 0 0.71429 11 0 0.592857 29 4 0.676638 57 5 0.668434 60 6 0.74758 64 5 0.657343 55 5 0.700000 52 5 0.85152 46 5 0.650000 19 2 0.72530 51 6 0.50807 71 5 0.520468 48 2 0.71765 104 5 0.77697 62 5 0.68963 37 5 0.86667 84 5 0.76654 0.616814 0.69595 0.724367 0.803153 0.74324 0.822394 0.848649 0.675676 0.468468 0.83228 0.83108 0.8205706 0.864865 0.90991 NA 0.502610 0.77004 0.79580 0.779962 0.54049 0.873527 0.73874 0.750794 0.577703 0.729730 0.619968 0.733688 0.700772 0.836914 0.758190 0.71362 0.691136 0.791892 0.879607 0.641892 0.794160 0.656692 0.712186 0.74245 0.81982 0.78748 0.869369 0 0.73400 0.734091 -0.00077006 5 0.73157 0.62769 0.1038833 0.21429179 0.46023212 insignificant 1.00000 1.00000 insignificant 0.355784 0.78345068 insignificant 1 1.000000 insignificant 0.0782518 0.294079 lowCoverage 1 lowCoverage 0.73400 0.704082 0.0276580 5 0.73157 0.56993 0.1616433 6.6924e-01 9.2221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1638e-01 6.2099e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0079318 8.9039e-01 lowCoverage 1.0000e+00 lowCoverage 0.73400 0.80299 -0.0360351 5 0.73157 0.69861 0.0329590 8.3869e-01 4.5603e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.3124e-01 6.8310e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0401696 5.6122e-01 lowCoverage 1.0000000 lowCoverage 0.734091 0.704082 0.028363 5 0.62769 0.56993 0.05776000 3.6269e-01 6.3009e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0302e-01 0.48794519 insignificant 1.0000e+00 1.000000 insignificant -0.086184 2.9177e-01 lowCoverage 1.0000e+00 lowCoverage 0.73409 0.80299 -0.0335216 5 0.62769 0.69861 -0.0709243 8.6134e-01 2.8886e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4153e-01 0.51213918 insignificant 1.0000e+00 1.00000 insignificant -0.1184214 0.1924689 lowCoverage 1.000000 lowCoverage 0.704082 0.80299 -0.0661935 5 0.56993 0.69861 -0.12868430 7.4929e-01 1.7698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6406e-01 4.7668e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0322378 6.7122e-01 lowCoverage 1.00000000 lowCoverage chr15 31232121 31233121 130567 FMN1 ENSG00000186031 0.865455 167 5 0.818969 222 5 0.77678 136 5 0.984416 160 5 0.701673 122 5 0.94915 411 5 0.734189 142 7 0.89548 208 5 0.7629399 122 5 0.883873 169 5 0.79219 254 7 0.783448 118 5 0.714596 173 5 0.956275 91 5 0.813667 198 5 0.532749 70 5 0.73427 52 3 0.75056 164 5 0.915457 201 5 0.91692 238 5 0.85559 72 5 0.644319 86 5 0.93901 141 5 0.57139 103 5 0.884351 61 5 0.90249 275 5 0.519397 160 5 0.72586 101 4 0.902515 215 5 0.786501 337 5 0.907738 251 5 0.91888 268 5 0.781319 163 5 0.867731 116 5 0.78571 63 3 0.916667 18 2 0.63419 183 5 0.96488 232 5 0.903552 160 5 0.92493 156 5 0.89410 116 5 0.76536 94 5 0.91401 170 6 0.87866 0.827254 0.84572 0.970671 0.830752 0.91824 0.786565 0.870869 0.772929 0.837032 0.90361 0.79722 0.8646933 0.947338 0.82097 0.698441 0.770241 0.90070 0.87501 0.918923 0.85764 0.782427 0.91890 0.884265 0.871297 0.879451 0.723206 0.692798 0.859073 0.940401 0.916263 0.88734 0.946065 0.888777 0.721402 0.924885 0.820556 0.959040 0.907638 0.91632 0.89052 0.77307 0.909159 5 0.86713 0.879052 -0.01654259 5 0.69556 0.68473 0.0108253 0.88604882 0.05645249 insignificant 1.00000 1.00000 insignificant 0.955894 0.47705212 insignificant 1 1.000000 insignificant 0.0176487 0.722310 lowCoverage 1 lowCoverage 0.86841 0.909444 -0.0502655 5 0.77284 0.81078 -0.0379422 7.5527e-01 5.5502e-03 weaklyHypometh 1.0000e+00 5.0456e-01 insignificant 9.0905e-01 4.1723e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0109321 8.4481e-01 lowCoverage 1.0000e+00 lowCoverage 0.86862 0.90661 -0.0225540 5 0.85080 0.88951 -0.0387118 9.7738e-01 9.4051e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8091e-01 1.1937e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0662384 1.1117e-01 insignificant 1.0000000 insignificant 0.879477 0.908387 -0.032291 5 0.68473 0.77970 -0.09497329 6.7587e-01 5.3554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6090e-01 0.14930438 insignificant 1.0000e+00 1.000000 insignificant -0.028581 6.6373e-01 lowCoverage 1.0000e+00 lowCoverage 0.88187 0.90661 -0.0170529 5 0.90676 0.88951 0.0172520 1.3828e-01 4.8066e-01 insignificant 1.0000e+00 1.000000 insignificant 6.8206e-01 0.19695016 insignificant 1.0000e+00 1.00000 insignificant -0.0838871 0.1242954 lowCoverage 1.000000 lowCoverage 0.910390 0.90661 0.0204817 5 0.82815 0.88951 -0.06135755 3.6608e-01 4.4844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8305e-01 5.3607e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0553063 3.5510e-01 lowCoverage 1.00000000 lowCoverage chr15 31393343 31394343 130573 RYR3 ENSG00000198838 0.841699 275 7 0.699166 145 7 0.73860 165 7 0.838370 140 7 0.745846 78 7 0.72128 689 7 0.802800 84 7 0.72898 197 7 0.6735719 221 7 0.771633 126 7 0.82829 201 7 0.764434 91 7 0.779646 206 6 NA 0 0 0.859357 88 7 0.752747 61 5 0.81190 71 7 0.85234 172 7 0.774406 254 7 0.72115 754 7 0.56394 233 5 0.664238 214 7 0.80297 248 7 0.41182 306 5 0.786133 116 5 0.80316 246 7 0.536529 328 5 0.60017 242 7 0.739286 114 7 0.785574 272 7 0.800714 235 7 0.75839 517 7 0.719106 115 5 0.723348 165 7 0.59410 77 7 0.661415 187 7 0.61186 859 5 0.70855 255 7 0.777946 438 7 0.81805 266 7 0.81420 159 7 0.88167 274 7 0.76726 859 7 0.85139 0.753658 0.76059 0.859401 0.743261 0.69516 0.784750 0.710536 0.692641 0.768206 0.83254 0.72069 0.7575598 NA 0.83074 0.745872 0.798930 0.82806 0.74970 0.700344 0.45617 0.600455 0.75712 0.408900 0.732612 0.836798 0.421509 0.496211 0.713286 0.800252 0.801061 0.77323 0.709326 0.689523 0.496918 0.633604 0.515968 0.717196 0.747054 0.82077 0.79842 0.88255 0.727080 5 0.75336 0.641810 0.09306225 7 0.75707 0.67795 0.0791210 0.00081020 0.99923342 weaklyHypermeth 0.40510 1.00000 insignificant 0.022924 0.71478333 weaklyHypermeth 1 1.000000 insignificant 0.0862669 0.048842 weaklyHypermeth 1 insignificant 0.75336 0.579614 0.1528116 7 0.75707 0.62850 0.1285719 1.9402e-10 9.7437e-01 weaklyHypermeth 6.0630e-09 1.0000e+00 weaklyHypermeth 6.5476e-05 9.5290e-01 weaklyHypermeth 2.7282e-03 1.000000 weaklyHypermeth 0.1042814 3.9186e-03 weaklyHypermeth 1.3995e-01 insignificant 0.75336 0.77255 -0.0232420 7 0.75707 0.78644 -0.0293647 9.5614e-01 6.8911e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8609e-01 2.7945e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0378143 1.5109e-01 insignificant 1.0000000 insignificant 0.641810 0.579614 0.057591 7 0.67795 0.62850 0.04945086 1.4165e-01 8.5637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8388e-02 0.81848892 insignificant 1.0000e+00 1.000000 insignificant 0.018014 6.8968e-01 insignificant 1.0000e+00 insignificant 0.64181 0.77255 -0.1138988 7 0.67795 0.78644 -0.1084857 9.9997e-01 2.8974e-03 weaklyHypometh 1.0000e+00 0.579483 insignificant 9.9459e-01 0.02793157 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.1240812 0.0111400 weaklyHypometh 0.823084 insignificant 0.579614 0.77255 -0.1723648 7 0.62850 0.78644 -0.15793656 9.9998e-01 1.5574e-05 weaklyHypometh 1.0000e+00 6.2298e-04 weaklyHypometh 9.9834e-01 3.7344e-04 weaklyHypometh 1.0000000 1.8672e-02 weaklyHypometh -0.1420957 1.2084e-03 weaklyHypometh 0.07108428 weaklyHypometh chr15 31590501 31591501 130583 RYR3 ENSG00000198838 0.817512 248 8 0.684787 119 8 0.70419 116 8 0.843680 185 8 0.835185 50 6 0.80963 234 8 0.778829 137 8 0.82793 120 7 0.6479509 97 7 0.879539 87 7 0.76544 233 8 0.779356 99 7 0.745968 137 8 0.846154 26 2 0.842806 137 8 0.747028 72 7 0.75943 78 7 0.83180 189 8 0.813410 171 8 0.82200 250 8 0.91806 59 7 0.807738 62 6 0.80005 144 8 0.79673 47 5 0.765476 49 5 0.81170 155 8 0.847658 94 5 0.69678 54 5 0.810026 123 5 0.784719 132 8 0.803583 178 8 0.79021 308 8 0.764689 110 7 0.714046 111 8 0.63399 161 8 0.772263 59 7 0.74909 88 8 0.71091 178 8 0.750529 247 8 0.85451 277 8 0.81919 261 8 0.84968 229 8 0.87752 206 8 0.84842 0.712968 0.71550 0.848755 0.837143 0.82366 0.790216 0.814697 0.774177 0.905515 0.87545 0.81083 0.8325933 0.817782 0.83825 0.746306 0.763451 0.81591 0.83695 0.820881 0.92467 0.843615 0.82261 0.806074 0.791837 0.853938 0.849824 0.726372 0.814664 0.808272 0.821434 0.79119 0.747886 0.740037 0.632992 0.778221 0.797973 0.732716 0.861035 0.87554 0.84222 0.87173 0.887720 4 0.81508 0.814235 0.00026766 8 0.79395 0.82184 -0.0278880 0.66089488 0.66416297 insignificant 1.00000 1.00000 insignificant 0.736183 0.32569305 insignificant 1 1.000000 insignificant -0.0135949 0.501632 insignificant 1 insignificant 0.81508 0.732673 0.0789063 8 0.79395 0.74815 0.0458003 4.0161e-05 9.9966e-01 weaklyHypermeth 7.7233e-04 1.0000e+00 weaklyHypermeth 4.0058e-03 9.9879e-01 weaklyHypermeth 8.3455e-02 1.000000 weaklyHypermeth 0.0649670 2.6318e-02 weaklyHypermeth 7.0189e-01 insignificant 0.81508 0.85410 -0.0457203 8 0.79395 0.80623 -0.0122735 9.8018e-01 3.0060e-03 weaklyHypometh 1.0000e+00 0.5424317 insignificant 9.8924e-01 4.4763e-03 weaklyHypometh 1.0000e+00 0.373027 insignificant -0.0411543 1.5263e-01 insignificant 1.0000000 insignificant 0.814235 0.732673 0.078389 8 0.82184 0.74815 0.07368835 1.5173e-03 9.9999e-01 weaklyHypermeth 2.7094e-02 1.0000e+00 weaklyHypermeth 1.1928e-02 0.99988505 weaklyHypermeth 2.3855e-01 1.000000 insignificant 0.078562 1.1456e-02 weaklyHypermeth 3.5801e-01 insignificant 0.81423 0.85410 -0.0495676 8 0.82184 0.80623 0.0156146 9.7358e-01 4.7543e-03 weaklyHypometh 1.0000e+00 0.679182 insignificant 9.1662e-01 0.02811960 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0275593 0.3289494 insignificant 1.000000 insignificant 0.732673 0.85410 -0.1291000 8 0.74815 0.80623 -0.05807380 9.9997e-01 1.0112e-05 weaklyHypometh 1.0000e+00 4.3965e-04 weaklyHypometh 1.0000e+00 7.3253e-06 weaklyHypometh 1.0000000 8.1392e-04 weaklyHypometh -0.1061213 6.9667e-03 weaklyHypometh 0.27866721 insignificant chr15 31747627 31748627 130588 RYR3 ENSG00000198838 0.894338 233 7 0.685250 81 4 0.67857 88 7 0.767857 82 7 0.886364 41 4 0.85846 272 7 0.773990 34 4 0.78064 55 4 0.7308824 56 4 0.829391 73 4 0.84409 134 4 0.972222 33 4 0.709325 64 4 NA 0 0 0.897243 74 4 0.714869 71 4 0.75707 74 4 0.76023 92 7 0.842177 75 7 0.80423 228 7 0.81250 29 4 0.684982 59 4 0.69568 153 7 0.77710 62 4 0.857143 29 4 0.77256 126 7 0.783059 83 7 0.61928 27 2 0.841346 44 4 0.891277 111 7 0.880203 129 7 0.81729 299 7 0.802466 67 3 0.512500 68 4 0.50322 105 7 0.932540 35 4 0.65000 77 4 0.59763 115 7 0.807336 337 7 0.82163 272 7 0.82119 166 7 0.88224 239 7 0.80064 208 7 0.88007 0.635870 0.68634 0.739130 0.893281 0.88113 0.759552 0.798061 0.736658 0.832509 0.84653 0.97101 0.7380952 NA 0.88656 0.723004 0.763853 0.68611 0.91491 0.839751 0.82609 0.701744 0.68492 0.807576 0.866460 0.740459 0.798356 0.656096 0.834448 0.928854 0.954348 0.84374 0.836957 0.655531 0.356917 0.862319 0.573370 0.462803 0.812460 0.83112 0.84131 0.85427 0.787538 4 0.81720 0.796699 0.02156440 7 0.81537 0.79228 0.0230924 0.23579380 0.94184365 insignificant 1.00000 1.00000 insignificant 0.719872 0.55012332 insignificant 1 1.000000 insignificant 0.0132917 0.665284 lowCoverage 1 lowCoverage 0.81720 0.644540 0.1796031 7 0.81537 0.64406 0.1713174 1.8250e-11 9.9940e-01 weaklyHypermeth 6.5179e-10 1.0000e+00 weaklyHypermeth 2.7703e-03 9.5818e-01 weaklyHypermeth 6.1563e-02 1.000000 weaklyHypermeth 0.1329343 1.1615e-01 lowCoverage 1.0000e+00 lowCoverage 0.81720 0.82815 -0.0088484 7 0.81537 0.82662 -0.0112442 8.6986e-01 5.5037e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4941e-01 2.0478e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0272813 2.6135e-01 lowCoverage 1.0000000 lowCoverage 0.796699 0.644540 0.153043 7 0.79228 0.64406 0.14822504 9.3211e-08 9.9907e-01 weaklyHypermeth 3.1070e-06 1.0000e+00 weaklyHypermeth 5.3337e-03 0.99176430 weaklyHypermeth 1.2404e-01 1.000000 insignificant 0.119643 1.5278e-01 lowCoverage 1.0000e+00 lowCoverage 0.79670 0.82815 -0.0316838 7 0.79228 0.82662 -0.0343365 9.6654e-01 1.6146e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3163e-01 0.19041973 insignificant 1.0000e+00 1.00000 insignificant -0.0405729 0.1686490 insignificant 1.000000 insignificant 0.644540 0.82815 -0.1851417 7 0.64406 0.82662 -0.18256159 9.9998e-01 6.3286e-06 weaklyHypometh 1.0000e+00 3.0136e-04 weaklyHypometh 9.8658e-01 1.9724e-02 weaklyHypometh 1.0000000 4.5697e-01 insignificant -0.1602156 6.9264e-02 lowCoverage 1.00000000 lowCoverage chr15 32488922 32489922 130599 ENSG00000206095 0.956744 183 5 0.927739 170 5 0.93636 154 5 0.957185 158 5 0.890965 60 5 0.90391 250 5 0.931731 122 5 0.80668 98 5 0.9104988 96 5 0.942918 60 3 0.91385 141 5 0.882418 53 5 0.946422 114 5 NA 0 0 0.931909 92 5 0.875000 32 3 0.67381 34 5 0.93786 159 5 0.977949 108 5 0.96801 261 5 0.86667 26 3 0.988889 70 5 0.89502 172 5 0.90000 38 5 1.000000 33 2 0.96045 172 5 0.943759 94 5 1.00000 32 3 0.923547 144 4 0.959091 197 5 0.955760 164 5 0.95679 311 5 0.941165 118 5 0.775599 104 5 0.90769 80 5 0.957895 81 5 0.80952 37 5 0.86184 225 5 0.969661 187 5 0.97970 250 5 0.95173 208 5 0.97141 207 5 0.97951 276 5 0.95272 0.918293 0.93038 0.957873 0.895156 0.89853 0.928280 0.808223 0.902729 0.935031 0.91550 0.86472 0.9555319 NA 0.92337 0.865506 0.679099 0.93679 0.97752 0.966670 0.87342 0.987693 0.89603 0.902690 1.000000 0.954957 0.949424 1.000000 0.922386 0.957998 0.953009 0.95139 0.946402 0.775298 0.897760 0.953364 0.971971 0.855530 0.967736 0.97750 0.94970 0.96973 0.978206 4 0.92239 0.944904 -0.02273920 5 0.92604 0.94564 -0.0195995 0.97939897 0.05766562 insignificant 1.00000 1.00000 insignificant 0.999729 0.00017476 weaklyHypometh 1 0.086306 weaklyHypometh -0.0367800 0.077028 lowCoverage 1 lowCoverage 0.92239 0.909938 0.0126962 5 0.92604 0.90579 0.0202531 2.1376e-01 3.4431e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6314e-01 1.0889e-02 inconclusive 1.0000e+00 1.000000 insignificant 0.0334320 3.5109e-01 lowCoverage 1.0000e+00 lowCoverage 0.92239 0.96720 -0.0460069 5 0.92604 0.97172 -0.0456815 9.9991e-01 3.2546e-03 weaklyHypometh 1.0000e+00 0.5424317 insignificant 9.9999e-01 1.6034e-04 weaklyHypometh 1.0000e+00 0.080170 weaklyHypometh -0.0613506 1.4155e-03 lowCoverage 0.1389724 lowCoverage 0.944942 0.908527 0.035909 5 0.95470 0.75482 0.19987718 1.4894e-01 8.3750e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3236e-01 0.65990834 insignificant 1.0000e+00 1.000000 insignificant 0.070212 6.7226e-02 lowCoverage 1.0000e+00 lowCoverage 0.94490 0.96720 -0.0232512 5 0.94564 0.97172 -0.0260820 9.9678e-01 3.9172e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.2050e-01 0.52054080 insignificant 1.0000e+00 1.00000 insignificant -0.0245706 0.0851042 lowCoverage 1.000000 lowCoverage 0.909938 0.96720 -0.0587437 5 0.90579 0.97172 -0.06593460 6.8167e-01 3.2622e-02 weaklyHypometh 1.0000e+00 5.0187e-01 insignificant 5.5715e-01 1.9181e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0947826 2.3929e-02 weaklyHypometh 0.62609762 insignificant chr15 32489554 32490554 130600 ENSG00000206095 0.923036 214 5 0.933410 247 6 0.94575 163 5 0.959939 212 5 0.783355 126 7 0.84354 299 5 0.851324 141 5 0.99002 135 5 0.8869585 147 6 0.942984 128 6 0.91499 128 6 0.923524 85 6 0.839211 126 6 0.969804 52 2 0.957300 145 5 0.789355 71 3 0.95152 38 4 0.96465 304 3 0.972490 144 4 0.96509 170 3 0.75384 85 6 0.846814 94 3 0.95564 186 5 0.83437 77 7 0.974233 158 5 0.97807 219 6 0.871595 136 5 1.00000 117 3 0.964955 198 6 0.916403 212 6 0.838022 273 6 0.91400 263 6 0.935402 184 6 0.906877 122 5 0.95968 254 5 0.811576 90 5 0.72968 111 6 0.94155 220 5 0.710520 285 5 0.98623 226 5 0.97962 242 3 0.91060 266 3 0.98247 253 5 0.91005 0.892807 0.91657 0.947827 0.911201 0.88631 0.905885 0.972880 0.938885 0.929794 0.92283 0.89202 0.9206513 0.943763 0.93251 0.910091 0.954077 0.93372 0.95163 0.917764 0.96721 0.938394 0.91373 0.868900 0.925529 0.948350 0.867213 1.000000 0.951123 0.969635 0.927536 0.92800 0.913973 0.807345 0.911723 0.908134 0.965141 0.893541 0.964676 0.96027 0.97738 0.93974 0.962523 2 0.92195 0.937562 -0.01601505 5 0.87642 0.74312 0.1333050 0.94535912 0.06995558 insignificant 1.00000 1.00000 insignificant 0.707000 0.25354894 insignificant 1 1.000000 insignificant 0.0114171 0.662629 lowCoverage 1 lowCoverage 0.92195 0.904179 0.0228850 5 0.87642 0.72564 0.1507832 4.6755e-01 3.7462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9530e-01 6.2318e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0346199 4.1294e-01 lowCoverage 1.0000e+00 lowCoverage 0.92195 0.95676 -0.0393205 3 0.87642 0.75461 0.1218107 9.9791e-01 1.3595e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8719e-01 5.2931e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0015240 9.7888e-01 lowCoverage 1.0000000 lowCoverage 0.937562 0.904179 0.035514 6 0.74312 0.72564 0.01747822 7.2739e-02 6.9097e-01 insignificant 9.0924e-01 1.0000e+00 insignificant 1.7390e-01 0.83723187 insignificant 1.0000e+00 1.000000 insignificant 0.023203 6.0289e-01 insignificant 1.0000e+00 insignificant 0.93756 0.95676 -0.0233342 3 0.74312 0.75461 -0.0114943 9.6199e-01 2.2859e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.8837e-01 0.36032929 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0098931 0.8686030 lowCoverage 1.000000 lowCoverage 0.904179 0.95676 -0.0707561 3 0.72564 0.75461 -0.02897249 9.9874e-01 1.6838e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9989e-01 1.4788e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0330959 6.2247e-01 lowCoverage 1.00000000 lowCoverage chr15 33377292 33378292 130697 ENSG00000214149 0.959006 364 7 0.949466 187 7 0.91357 92 6 0.976442 306 7 0.923469 57 7 0.94722 279 7 0.793630 71 7 0.95800 177 7 0.9678179 69 6 0.973377 90 6 0.93159 220 7 0.971140 56 6 0.907638 163 6 0.800000 10 2 0.947990 128 7 0.976190 32 3 0.88889 23 2 0.97691 289 7 0.961607 106 6 0.97120 225 7 0.93567 64 5 1.000000 95 6 0.94962 181 7 0.98413 32 4 0.931471 127 7 0.94585 245 7 0.906462 112 7 0.94762 22 3 0.950543 137 6 0.961684 256 7 0.915355 213 7 0.95816 259 7 0.982619 123 5 1.000000 122 7 0.93838 282 7 0.972109 100 7 0.94459 79 7 0.95626 255 7 0.954126 350 7 0.98629 475 7 0.96711 316 7 0.97552 332 6 0.97370 424 7 0.94757 0.935422 0.90962 0.972330 0.904337 0.93833 0.785995 0.937070 0.954180 0.966153 0.92278 0.95936 0.9435748 0.889472 0.93071 0.964109 0.939449 0.96541 0.96502 0.967672 0.91255 1.000000 0.94472 0.972884 0.949500 0.939678 0.933048 0.922421 0.934328 0.967915 0.921173 0.95286 0.976597 1.000000 0.961485 0.958305 0.965880 0.954172 0.952490 0.98059 0.97008 0.97701 0.971935 3 0.94701 0.941987 0.00295546 7 0.95286 0.94052 0.0123482 0.13665089 0.70593003 insignificant 1.00000 1.00000 insignificant 0.720443 0.31803166 insignificant 1 1.000000 insignificant -0.0141238 0.326200 insignificant 1 insignificant 0.94701 0.952133 -0.0024481 7 0.95286 0.94041 0.0124535 1.0124e-01 1.9288e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8045e-01 1.3071e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0309024 5.7979e-02 insignificant 1.0000e+00 insignificant 0.94701 0.97206 -0.0243543 7 0.95286 0.97274 -0.0198735 9.9342e-01 4.8448e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 6.5134e-01 2.0956e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0365921 1.0234e-02 weaklyHypometh 0.6396377 insignificant 0.941987 0.952133 -0.014428 7 0.94052 0.94041 0.00010539 5.8439e-01 5.0413e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9565e-01 0.12607088 insignificant 1.0000e+00 1.000000 insignificant -0.016779 1.9747e-01 insignificant 1.0000e+00 insignificant 0.94199 0.97206 -0.0288082 7 0.94052 0.97274 -0.0322217 9.9899e-01 3.0825e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.4689e-01 0.60337966 insignificant 1.0000e+00 1.00000 insignificant -0.0224683 0.0280338 weaklyHypometh 1.000000 insignificant 0.952133 0.97206 -0.0195045 7 0.94041 0.97274 -0.03232706 7.1408e-01 3.3715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5776e-01 9.9283e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0056897 6.1950e-01 insignificant 1.00000000 insignificant chr15 38177898 38178898 131527 ENSG00000206058 0.492342 129 3 0.563100 384 6 0.4155269 154 3 0.816167 124 3 0.5356204 187 6 0.561925 208 3 0.419037 187 6 0.383096 166 6 0.550469 108 3 0.451620 108 3 0.451907 283 6 0.289683 58 3 0.2041502 149 3 0.822821 95 3 0.368759 166 3 0.156400 102 3 0.000000 14 1 0.37129 143 3 0.471705 300 4 0.671922 180 3 0.457904 110 6 0.069075 84 4 0.714691 127 3 0.210366 125 6 0.39520 51 2 0.595787 376 6 0.3759836 242 6 0.142585 107 5 0.359274 283 3 0.292227 440 6 0.4697785 394 6 0.288574 204 3 0.010106 275 6 0.0015015 210 3 0.042695 209 2 0.000000 18 1 0.019948 316 5 0.0032103 410 6 0.199458 227 3 0.124868 193 3 0.322299 122 3 0.131850 159 3 0.156311 119 3 0.665218 0.562032 0.4166639 0.671219 0.5786896 0.721789 0.5306092 0.605995 0.679149 0.616339 0.674654 0.4440098 0.5040531 0.693996 0.602456 0.190900 0.466823 0.3674620 0.542368 0.714340 0.672691 0.11896619 0.787400 0.551553 0.51997 0.606763 0.5971991 0.4912266 0.681150 0.537077 0.65701 0.640740 0.028656 0.0047433 0.063190 0.000000 0.037988 0.0049232 0.223922 0.163769 0.384788 0.145686 0.326974 3 0.543914 0.558396 -0.0277173 3 0.326722 0.3042600 0.0224619 0.193602 0.775528 lowCoverage 1 1 lowCoverage 0.350241 0.916128 lowCoverage 1 1 lowCoverage 0.0855899 0.227904 lowCoverage 1 lowCoverage 0.544249 0.0166898 0.5275585 3 0.420071 0.0077277 0.41234347 9.9833e-29 1.0000e+00 lowCoverage 1.9967e-26 1.0000e+00 lowCoverage 1.9486e-11 1.0000e+00 lowCoverage 4.8715e-09 1.0000e+00 lowCoverage 0.4369669 6.2225e-09 lowCoverage 6.2225e-06 lowCoverage 0.544921 0.228049 0.3257348 3 0.420071 0.167489 0.2525823 3.7433e-12 0.9999999 lowCoverage 3.7433e-09 1.00000 lowCoverage 7.8813e-07 0.999990 lowCoverage 0.00026271 1 lowCoverage 0.2629200 2.7142e-04 lowCoverage 0.067855 lowCoverage 0.561091 0.0166898 0.5482199 5 0.3769058 0.0077277 0.3691781 7.7441e-24 1.0000e+00 hypermethylated 3.8721e-21 1.0000e+00 hypermethylated 1.2204e-09 1.0000e+00 hypermethylated 2.4408e-07 1.0000e+00 hypermethylated 0.3513770 3.3288e-05 lowCoverage 0.0041610 lowCoverage 0.564041 0.228049 0.36124530 3 0.369387 0.167489 0.2018982 4.9222e-10 0.999934 lowCoverage 4.9222e-07 1 lowCoverage 9.1197e-05 0.999894 lowCoverage 0.030858 1 lowCoverage 0.177330 0.0145206 lowCoverage 1.00000 lowCoverage 0.0167131 0.228327 -0.2110749 3 0.0090156 0.195404 -0.1863880 1.0000e+00 2.4549e-08 lowCoverage 1.000e+00 4.0914e-06 lowCoverage 1.0000e+00 3.8834e-05 lowCoverage 1.000000 6.4724e-03 lowCoverage -0.17404691 7.8033e-03 lowCoverage 0.867032 lowCoverage chr15 38516379 38517379 131534 IVD ENSG00000128928 0.018520 198 6 0.024945 446 7 0.0734968 282 5 0.032602 268 6 0.0054945 275 5 0.155079 432 6 0.031399 296 7 0.013649 289 5 0.012158 315 5 0.018260 239 5 0.014986 335 6 0.032025 166 5 0.0065899 212 5 0.019250 245 5 0.019964 325 5 0.024510 184 5 0.000000 2 0 0.25100 300 6 0.014687 432 5 0.152062 277 6 0.021645 158 5 0.005102 135 4 0.015715 206 6 0.009434 306 7 0.00000 109 7 0.008709 479 8 0.0046296 393 5 0.007353 243 5 0.027243 336 5 0.018052 633 7 0.0064899 507 8 0.022818 348 6 0.051025 263 7 0.0038610 127 5 0.000000 477 7 0.033333 49 3 0.044165 304 7 0.1202117 427 8 0.021329 261 6 0.021044 244 6 0.026201 229 6 0.021311 229 6 0.026587 203 6 0.014046 0.029803 0.0401337 0.027508 0.0056301 0.025346 0.0384910 0.017699 0.012458 0.021915 0.018973 0.0267199 0.0074746 0.019914 0.030822 0.021527 NA 0.0298355 0.016820 0.012465 0.022179 0.00587406 0.029586 0.011048 0.00000 0.010440 0.0054215 0.0086107 0.033747 0.004902 0.01060 0.033902 0.061438 0.0039563 0.000000 0.019172 0.035303 0.0203786 0.033864 0.029902 0.011048 0.017023 0.039864 5 0.024550 0.015580 0.0078708 5 0.020972 0.0099314 0.0110407 0.061646 0.999973 insignificant 1 1 insignificant 0.173395 0.999992 insignificant 1 1 insignificant 0.0337681 0.032481 weaklyHypermeth 1 insignificant 0.027556 0.0243457 0.0020429 5 0.102558 0.1027864 -0.00022866 7.3456e-01 5.9266e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4641e-01 8.4141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0039346 8.6662e-01 insignificant 1.0000e+00 insignificant 0.027571 0.029160 0.0040936 6 0.136744 0.019365 0.1173790 3.8918e-01 0.5282551 insignificant 1.0000e+00 1.00000 insignificant 1.8103e-01 0.802824 insignificant 1.00000000 1 insignificant 0.0227393 1.3423e-01 insignificant 1.000000 insignificant 0.015576 0.0237082 -0.0075210 6 0.0099314 0.0212216 -0.0112902 9.9885e-01 3.6030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9935e-01 6.1198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0298334 1.5545e-01 insignificant 1.0000000 insignificant 0.015605 0.029185 -0.00659978 5 0.013656 0.021785 -0.0081297 8.2334e-01 0.065139 insignificant 1.0000e+00 1 insignificant 9.0658e-01 0.137614 insignificant 1.000000 1 insignificant -0.011029 0.0012751 weaklyHypometh 0.42504 insignificant 0.0243902 0.029160 -0.0017652 5 0.1370486 0.019365 0.1176839 4.7305e-01 8.1454e-01 insignificant 1.000e+00 1.0000e+00 insignificant 5.9759e-01 9.3540e-01 insignificant 1.000000 1.0000e+00 insignificant 0.01880474 3.3957e-01 insignificant 1.000000 insignificant chr15 38985105 38986105 131543 VPS18 ENSG00000104142 0.033333 39 3 0.032468 107 5 0.0068966 131 5 0.000000 13 0 0.0000000 86 5 0.019091 66 3 0.011597 172 5 0.000000 35 4 0.030769 84 5 0.012500 77 5 0.016239 131 5 0.008000 125 5 0.0257246 126 5 NA 0 0 0.017255 153 5 0.026767 155 5 0.015385 73 5 0.00000 17 3 0.000000 104 5 0.028718 63 5 0.013333 45 5 0.000000 11 0 0.000000 116 5 0.000000 33 4 0.00000 5 0 0.025787 136 5 0.0500000 27 3 0.000000 24 2 0.000000 54 5 0.000000 133 5 0.0000000 119 5 0.030952 109 5 0.053571 40 5 0.0000000 85 5 0.000000 78 3 0.000000 21 3 0.000000 34 3 0.0000000 61 5 0.000000 71 5 0.000000 37 3 0.000000 27 3 0.000000 16 0 0.000000 41 5 0.042350 0.028103 0.0056529 0.000000 0.0000000 0.016393 0.0099738 0.000000 0.027743 0.011270 0.017514 0.0072131 0.0217688 NA 0.018451 0.022408 0.012610 0.0021152 0.000000 0.024632 0.021858 0.00067741 0.000000 0.000000 0.00000 0.021792 0.0409836 0.0000000 0.000000 0.000000 0.00000 0.026737 0.045960 0.0000000 0.009192 0.000000 0.000000 0.0000000 0.000000 0.000000 0.000000 0.000000 0.000000 0 0.015936 0.011084 0.0046231 5 0.015857 0.0120955 0.0037617 0.241823 0.368870 insignificant 1 1 insignificant 0.077512 0.760407 insignificant 1 1 insignificant 0.0049804 0.383650 lowCoverage 1 lowCoverage 0.015936 0.0062696 0.0064815 5 0.015857 0.0095726 0.00628453 3.3379e-01 9.7711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5125e-01 9.9696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0060579 5.4093e-01 lowCoverage 1.0000e+00 lowCoverage 0.015936 0.000000 0.0156226 5 0.015857 0.000000 0.0158572 3.0794e-02 0.9998200 weaklyHypermeth 1.0000e+00 1.00000 insignificant 3.4029e-02 0.999909 weaklyHypermeth 1.00000000 1 insignificant 0.0149864 3.7574e-05 lowCoverage 0.018251 lowCoverage 0.011084 0.0062696 0.0046914 5 0.0120955 0.0095726 0.0025229 3.4456e-01 7.5193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4324e-01 8.5015e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010775 9.1813e-01 lowCoverage 1.0000000 lowCoverage 0.011084 0.000000 0.01073148 5 0.012096 0.000000 0.0120955 8.4658e-02 0.993844 insignificant 1.0000e+00 1 insignificant 1.8766e-01 0.995414 insignificant 1.000000 1 insignificant 0.010006 0.0633198 lowCoverage 1.00000 lowCoverage 0.0062696 0.000000 0.0090090 5 0.0095726 0.000000 0.0095726 7.5699e-01 9.9992e-01 insignificant 1.000e+00 1.0000e+00 insignificant 7.9755e-01 9.9999e-01 insignificant 1.000000 1.0000e+00 insignificant 0.00892857 3.6322e-01 lowCoverage 1.000000 lowCoverage chr15 38985388 38986388 131544 VPS18 ENSG00000104142 0.027778 40 3 0.032468 107 5 0.0068966 131 5 0.000000 13 0 0.0000000 86 5 0.182576 67 3 0.011597 172 5 0.000000 35 4 0.030769 84 5 0.012500 77 5 0.016239 131 5 0.008000 125 5 0.0257246 126 5 NA 0 0 0.017255 153 5 0.026767 155 5 0.015385 73 5 0.21429 21 3 0.000000 104 5 0.190598 65 5 0.013333 45 5 0.000000 11 0 0.142857 119 5 0.000000 33 4 0.00000 5 0 0.025787 136 5 0.0500000 27 3 0.000000 24 2 0.000000 54 5 0.000000 133 5 0.0000000 119 5 0.307823 111 5 0.053571 40 5 0.0000000 85 5 0.000000 78 3 0.000000 21 3 0.000000 34 3 0.0000000 61 5 0.000000 73 5 0.166667 39 3 0.000000 27 3 0.000000 16 0 0.000000 41 5 0.042350 0.028103 0.0056529 0.000000 0.0000000 0.016393 0.0099738 0.000000 0.027743 0.011270 0.017514 0.0072131 0.0217688 NA 0.018451 0.022408 0.012610 0.0021152 0.000000 0.024632 0.021858 0.00067741 0.000000 0.000000 0.00000 0.021792 0.0409836 0.0000000 0.000000 0.000000 0.00000 0.026737 0.045960 0.0000000 0.009192 0.000000 0.000000 0.0000000 0.000000 0.000000 0.000000 0.000000 0.000000 0 0.018161 0.014724 0.0038699 5 0.146548 0.1767463 -0.0301986 0.341296 0.348910 insignificant 1 1 insignificant 0.143230 0.731910 insignificant 1 1 insignificant -0.0018866 0.952199 lowCoverage 1 lowCoverage 0.015936 0.0062696 0.0064815 5 0.015857 0.0095726 0.00628453 3.3379e-01 9.7711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5125e-01 9.9696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0341682 7.2805e-02 lowCoverage 1.0000e+00 lowCoverage 0.018161 0.010309 0.0142279 5 0.146548 0.166667 -0.0201190 5.4315e-02 0.9952479 insignificant 1.0000e+00 1.00000 insignificant 6.9485e-02 0.998900 insignificant 1.00000000 1 insignificant 0.0097634 8.0026e-01 lowCoverage 1.000000 lowCoverage 0.011084 0.0062696 0.0046914 5 0.0120955 0.0095726 0.0025229 3.4456e-01 7.5193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4324e-01 8.5015e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0360548 2.2256e-01 lowCoverage 1.0000000 lowCoverage 0.015931 0.010256 0.01279059 5 0.294354 0.142857 0.1514968 2.8032e-01 0.999821 insignificant 1.0000e+00 1 insignificant 3.7304e-01 0.999884 insignificant 1.000000 1 insignificant 0.011650 0.7909826 lowCoverage 1.00000 lowCoverage 0.0062696 0.000000 0.0090090 5 0.0095726 0.000000 0.0095726 7.5699e-01 9.9992e-01 insignificant 1.000e+00 1.0000e+00 insignificant 7.9755e-01 9.9999e-01 insignificant 1.000000 1.0000e+00 insignificant -0.02440476 5.1380e-01 lowCoverage 1.000000 lowCoverage chr15 38985852 38986852 131545 VPS18 ENSG00000104142 0.233117 319 9 0.226308 341 11 0.2862386 354 11 0.178501 153 8 0.2534435 188 11 0.414701 324 9 0.345259 404 11 0.261088 213 10 0.293342 267 11 0.288978 220 11 0.268163 310 11 0.240102 326 11 0.3582101 343 11 NA 0 0 0.271120 342 11 0.229798 221 11 0.290627 184 11 0.31682 177 9 0.288029 232 11 0.292883 308 11 0.441306 100 11 0.216490 101 6 0.279518 336 11 0.269669 106 10 0.31488 82 6 0.373957 372 11 0.3167186 117 9 0.173577 83 8 0.284750 222 11 0.292201 425 11 0.2495487 384 11 0.463329 384 11 0.144710 320 11 0.0313254 325 11 0.000000 114 6 0.064269 171 9 0.130670 106 9 0.0214065 414 11 0.260459 264 11 0.268025 364 9 0.246704 201 9 0.227261 227 6 0.176108 344 13 0.435407 0.328236 0.4329478 0.319530 0.3795290 0.540037 0.5179319 0.393607 0.426815 0.430925 0.405618 0.3597836 0.5323588 NA 0.401579 0.329966 0.426477 0.3602995 0.441286 0.412258 0.670683 0.29681729 0.363457 0.407383 0.47722 0.559433 0.4547910 0.2620121 0.431729 0.449123 0.38339 0.537018 0.192416 0.0468086 0.028332 0.094963 0.191859 0.0325888 0.467080 0.374368 0.440651 0.404077 0.308979 6 0.322947 0.369742 -0.0325105 11 0.328119 0.3600484 -0.0319296 0.798451 0.091552 insignificant 1 1 insignificant 0.559175 0.438469 insignificant 1 1 insignificant -0.0254481 0.366268 insignificant 1 insignificant 0.322487 0.0744828 0.2970948 11 0.285221 0.0659561 0.21926444 1.1816e-30 1.0000e+00 hypermethylated 2.9541e-28 1.0000e+00 hypermethylated 3.9476e-12 1.0000e+00 hypermethylated 1.3159e-09 1.0000e+00 hypermethylated 0.2154834 6.0447e-05 hypermethylated 8.6353e-03 hypermethylated 0.321463 0.331187 0.0580473 11 0.281245 0.275180 0.0060649 1.2083e-02 0.9631102 weaklyHypermeth 1.0000e+00 1.00000 insignificant 7.5977e-02 0.963753 insignificant 1.00000000 1 insignificant 0.0451688 5.4808e-02 insignificant 1.000000 insignificant 0.369043 0.0744828 0.3264584 11 0.3018710 0.0659561 0.2359149 4.4063e-20 9.9926e-01 hypermethylated 8.3710e-18 1.0000e+00 hypermethylated 1.3353e-10 9.9984e-01 hypermethylated 4.4510e-08 1.0000e+00 hypermethylated 0.2409315 7.2539e-06 hypermethylated 0.0021554 hypermethylated 0.369974 0.337710 0.09911575 11 0.409275 0.296347 0.1129280 6.8977e-03 0.994646 weaklyHypermeth 4.9269e-01 1 insignificant 9.9664e-02 0.994387 insignificant 1.000000 1 insignificant 0.070617 0.0303585 weaklyHypermeth 1.00000 insignificant 0.0744828 0.336988 -0.2632678 11 0.0659561 0.259320 -0.1933636 9.9930e-01 1.1100e-11 hypomethylated 1.000e+00 2.2199e-09 hypomethylated 9.9960e-01 4.0213e-06 hypomethylated 1.000000 1.0053e-03 hypomethylated -0.17031468 3.4487e-04 weaklyHypometh 0.114956 insignificant chr15 38986054 38987054 131546 VPS18 ENSG00000104142 0.289119 303 8 0.302245 278 8 0.3935780 280 8 0.232051 145 8 0.3484848 137 8 0.552935 300 8 0.474731 301 8 0.358996 195 8 0.403345 210 8 0.397344 175 8 0.358575 237 8 0.330140 250 8 0.4925389 264 8 NA 0 0 0.370339 248 8 0.302814 133 8 0.399612 137 8 0.37442 170 8 0.396040 162 8 0.372760 273 8 0.598462 67 8 0.309272 91 6 0.363373 265 8 0.370795 91 8 0.43295 79 6 0.508756 283 8 0.4042381 96 6 0.238668 67 6 0.391531 188 8 0.401777 357 8 0.3431295 317 8 0.595184 322 8 0.198976 295 8 0.0430725 276 8 0.000000 36 3 0.088370 154 6 0.179671 77 6 0.0294339 377 8 0.338597 223 8 0.341123 344 8 0.320716 186 8 0.295439 219 6 0.228941 313 10 0.483424 0.366087 0.4857463 0.358497 0.4258130 0.605895 0.5810943 0.441608 0.478865 0.483477 0.451826 0.4036596 0.5972806 NA 0.449356 0.366997 0.478486 0.4038451 0.495102 0.462534 0.748409 0.33301452 0.407781 0.457064 0.53541 0.626331 0.5026314 0.2939648 0.484379 0.503894 0.43015 0.600330 0.215882 0.0525169 0.031787 0.106544 0.215256 0.0365630 0.524041 0.420022 0.494389 0.453355 0.346660 6 0.400863 0.448897 -0.0389607 8 0.435042 0.4760605 -0.0410181 0.635704 0.186078 insignificant 1 1 insignificant 0.419945 0.457735 insignificant 1 1 insignificant -0.0368590 0.313470 insignificant 1 insignificant 0.400384 0.0888889 0.3582623 8 0.389423 0.0906896 0.29873315 2.6017e-32 9.9995e-01 hypermethylated 1.3008e-29 1.0000e+00 hypermethylated 4.5086e-13 1.0000e+00 hypermethylated 2.2543e-10 1.0000e+00 hypermethylated 0.2863988 7.3820e-05 hypermethylated 9.2275e-03 hypermethylated 0.398570 0.360873 0.0642696 8 0.355944 0.350229 0.0057150 9.1433e-03 0.8455190 weaklyHypermeth 8.3121e-01 1.00000 insignificant 6.6666e-02 0.842225 insignificant 1.00000000 1 insignificant 0.0713564 2.3413e-02 weaklyHypermeth 1.000000 insignificant 0.448151 0.0888889 0.3964452 8 0.4105681 0.0906896 0.3198785 6.3427e-21 9.9393e-01 hypermethylated 1.5857e-18 1.0000e+00 hypermethylated 3.4668e-11 9.9807e-01 hypermethylated 1.7334e-08 1.0000e+00 hypermethylated 0.3232578 8.8416e-06 hypermethylated 0.0021554 hypermethylated 0.449145 0.368631 0.11094762 8 0.528454 0.385252 0.1432028 8.8535e-03 0.973384 weaklyHypermeth 5.9023e-01 1 insignificant 1.2003e-01 0.968038 insignificant 1.000000 1 insignificant 0.108215 0.0112014 weaklyHypermeth 1.00000 insignificant 0.0888889 0.367917 -0.2937417 8 0.0906896 0.356565 -0.2658750 9.7893e-01 6.2024e-14 hypomethylated 1.000e+00 3.1012e-11 hypomethylated 9.8540e-01 7.5165e-08 hypomethylated 1.000000 3.7582e-05 hypomethylated -0.21504237 5.9425e-04 hypomethylated 0.118851 insignificant chr15 38986539 38987539 131547 VPS18 ENSG00000104142 0.516163 275 6 0.387842 234 6 0.5190236 223 6 0.386752 122 6 0.4646465 102 6 0.646827 257 6 0.623311 232 6 0.478662 178 6 0.512152 183 6 0.519376 143 6 0.478100 179 6 0.433520 201 6 0.6352814 217 6 NA 0 0 0.482675 189 6 0.398990 66 6 0.519995 111 6 0.43644 156 6 0.528053 128 6 0.492795 241 6 0.797950 55 6 0.360817 90 6 0.438955 217 6 0.494393 73 6 0.57727 77 6 0.664099 236 6 0.5389841 90 6 0.318224 59 6 0.522042 168 6 0.535703 292 6 0.4575060 265 6 0.644751 273 6 0.220659 280 6 0.0574299 240 6 0.000000 36 3 0.117827 150 6 0.239561 72 6 0.0392453 353 6 0.564328 191 6 0.458726 321 6 0.534526 166 6 0.492398 205 6 0.381568 293 6 0.513506 0.387872 0.5178500 0.383020 0.4549403 0.644083 0.6188616 0.471816 0.506109 0.514309 0.482733 0.4298383 0.6338115 NA 0.477705 0.391077 0.508711 0.4314697 0.528969 0.489279 0.799603 0.35565942 0.435674 0.488329 0.57204 0.666261 0.5370133 0.3140731 0.517512 0.538363 0.45957 0.638409 0.221517 0.0561093 0.032135 0.113832 0.229980 0.0390641 0.559887 0.448754 0.528207 0.484366 0.370372 6 0.479197 0.522427 -0.0481570 6 0.509690 0.5433505 -0.0336606 0.967176 0.060858 insignificant 1 1 insignificant 0.952259 0.202906 insignificant 1 1 insignificant -0.0312984 0.468058 insignificant 1 insignificant 0.479197 0.0937224 0.3870042 6 0.509690 0.1129422 0.39674770 7.2753e-34 1.0000e+00 hypermethylated 7.2753e-31 1.0000e+00 hypermethylated 8.8479e-14 1.0000e+00 hypermethylated 8.8479e-11 1.0000e+00 hypermethylated 0.3854726 5.2026e-05 hypermethylated 8.6353e-03 hypermethylated 0.479197 0.392007 0.0683079 6 0.509690 0.475419 0.0342705 8.3294e-03 0.3591621 weaklyHypermeth 8.3121e-01 1.00000 insignificant 7.8436e-02 0.308425 insignificant 1.00000000 1 insignificant 0.0116172 7.5835e-01 insignificant 1.000000 insignificant 0.522427 0.0937224 0.4325821 6 0.5433505 0.1129422 0.4304083 1.1106e-22 1.0000e+00 hypermethylated 3.7020e-20 1.0000e+00 hypermethylated 1.4176e-12 1.0000e+00 hypermethylated 1.4176e-09 1.0000e+00 hypermethylated 0.4167711 4.1980e-06 hypermethylated 0.0021554 hypermethylated 0.522427 0.392007 0.12028933 6 0.543351 0.475419 0.0679311 2.3349e-03 0.703937 weaklyHypermeth 2.4886e-01 1 insignificant 5.8115e-02 0.684721 insignificant 1.000000 1 insignificant 0.042916 0.4033621 insignificant 1.00000 insignificant 0.0937224 0.392007 -0.3178117 6 0.1129422 0.475419 -0.3624772 1.0000e+00 1.4933e-15 hypomethylated 1.000e+00 1.4933e-12 hypomethylated 1.0000e+00 3.4299e-09 hypomethylated 1.000000 3.4299e-06 hypomethylated -0.37385542 5.0787e-05 hypomethylated 0.025394 hypomethylated chr15 38994187 38995187 131551 VPS18 ENSG00000104142 0.811564 182 5 0.654139 191 5 0.8116143 180 5 0.771275 164 5 0.7211688 95 5 0.856132 269 5 0.891991 238 5 0.803995 130 5 0.762752 237 5 0.853937 120 5 0.856074 175 5 0.772778 138 5 0.8128142 181 5 0.859259 23 3 0.716601 173 5 0.855132 141 5 0.677767 122 5 0.77252 221 5 0.855381 127 5 0.768170 241 5 0.758874 71 5 0.822680 126 5 0.794504 185 5 0.794806 92 5 0.85780 84 4 0.858203 216 5 0.7971681 99 5 0.856725 84 5 0.788342 169 5 0.863850 214 5 0.7892343 218 5 0.838016 319 5 0.811149 185 5 0.6522459 107 5 1.000000 29 1 0.826829 72 5 0.863127 124 5 0.6826697 197 5 0.809591 219 5 0.771388 249 5 0.775832 141 5 0.829562 233 5 0.846119 156 5 0.823951 0.695728 0.8251803 0.777018 0.7265657 0.873152 0.8960772 0.828696 0.774374 0.870851 0.866426 0.8019625 0.8331509 0.819071 0.750442 0.879813 0.710807 0.7655833 0.862057 0.786504 0.776086 0.82531295 0.805462 0.796991 0.86494 0.862121 0.7995029 0.8699249 0.796745 0.858243 0.81863 0.837575 0.847413 0.6890718 NA 0.790452 0.881701 0.6470491 0.850900 0.801978 0.807219 0.840159 0.876122 5 0.801075 0.828982 -0.0228759 5 0.792023 0.8192363 -0.0272132 0.914015 0.045647 weaklyHypometh 1 1 insignificant 0.893014 0.081881 insignificant 1 1 insignificant -0.0240971 0.187645 lowCoverage 1 lowCoverage 0.801075 0.7843137 0.0217986 5 0.792023 0.7727183 0.01930480 5.7282e-02 3.2675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9434e-01 1.9409e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0117499 8.3437e-01 lowCoverage 1.0000e+00 lowCoverage 0.801075 0.811623 -0.0172398 5 0.792023 0.803148 -0.0111251 3.5938e-01 0.0534515 insignificant 1.0000e+00 1.00000 insignificant 4.4737e-01 0.072024 insignificant 1.00000000 1 insignificant -0.0122450 5.6387e-01 lowCoverage 1.000000 lowCoverage 0.828982 0.7843137 0.0452003 5 0.8192363 0.7727183 0.0465180 1.9748e-02 8.3161e-01 weaklyHypermeth 6.5828e-01 1.0000e+00 insignificant 2.5445e-01 6.6358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0123472 8.2345e-01 lowCoverage 1.0000000 lowCoverage 0.828982 0.811623 -0.00066429 5 0.819236 0.803148 0.0160881 8.4869e-02 0.122832 insignificant 1.0000e+00 1 insignificant 2.4046e-01 0.264025 insignificant 1.000000 1 insignificant 0.011852 0.5257541 lowCoverage 1.00000 lowCoverage 0.7843137 0.811623 -0.0458478 5 0.7727183 0.803148 -0.0304299 5.4765e-01 1.5795e-01 insignificant 1.000e+00 1.0000e+00 insignificant 6.0977e-01 3.1801e-01 insignificant 1.000000 1.0000e+00 insignificant -0.00049519 9.9296e-01 lowCoverage 1.000000 lowCoverage chr15 38994376 38995376 131552 VPS18 ENSG00000104142 0.811564 182 5 0.654139 191 5 0.8116143 180 5 0.771275 164 5 0.7211688 95 5 0.856132 269 5 0.891991 238 5 0.803995 130 5 0.762752 237 5 0.853937 120 5 0.856074 175 5 0.772778 138 5 0.8128142 181 5 0.859259 23 3 0.716601 173 5 0.855132 141 5 0.677767 122 5 0.77252 221 5 0.855381 127 5 0.768170 241 5 0.758874 71 5 0.822680 126 5 0.794504 185 5 0.794806 92 5 0.85780 84 4 0.858203 216 5 0.7971681 99 5 0.856725 84 5 0.788342 169 5 0.863850 214 5 0.7892343 218 5 0.838016 319 5 0.811149 185 5 0.6522459 107 5 1.000000 29 1 0.826829 72 5 0.863127 124 5 0.6826697 197 5 0.809591 219 5 0.771388 249 5 0.775832 141 5 0.829562 233 5 0.846119 156 5 0.823951 0.695728 0.8251803 0.777018 0.7265657 0.873152 0.8960772 0.828696 0.774374 0.870851 0.866426 0.8019625 0.8331509 0.819071 0.750442 0.879813 0.710807 0.7655833 0.862057 0.786504 0.776086 0.82531295 0.805462 0.796991 0.86494 0.862121 0.7995029 0.8699249 0.796745 0.858243 0.81863 0.837575 0.847413 0.6890718 NA 0.790452 0.881701 0.6470491 0.850900 0.801978 0.807219 0.840159 0.876122 5 0.801075 0.828982 -0.0228759 5 0.792023 0.8192363 -0.0272132 0.914015 0.045647 weaklyHypometh 1 1 insignificant 0.893014 0.081881 insignificant 1 1 insignificant -0.0240971 0.187645 lowCoverage 1 lowCoverage 0.801075 0.7843137 0.0217986 5 0.792023 0.7727183 0.01930480 5.7282e-02 3.2675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9434e-01 1.9409e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0117499 8.3437e-01 lowCoverage 1.0000e+00 lowCoverage 0.801075 0.811623 -0.0172398 5 0.792023 0.803148 -0.0111251 3.5938e-01 0.0534515 insignificant 1.0000e+00 1.00000 insignificant 4.4737e-01 0.072024 insignificant 1.00000000 1 insignificant -0.0122450 5.6387e-01 lowCoverage 1.000000 lowCoverage 0.828982 0.7843137 0.0452003 5 0.8192363 0.7727183 0.0465180 1.9748e-02 8.3161e-01 weaklyHypermeth 6.5828e-01 1.0000e+00 insignificant 2.5445e-01 6.6358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0123472 8.2345e-01 lowCoverage 1.0000000 lowCoverage 0.828982 0.811623 -0.00066429 5 0.819236 0.803148 0.0160881 8.4869e-02 0.122832 insignificant 1.0000e+00 1 insignificant 2.4046e-01 0.264025 insignificant 1.000000 1 insignificant 0.011852 0.5257541 lowCoverage 1.00000 lowCoverage 0.7843137 0.811623 -0.0458478 5 0.7727183 0.803148 -0.0304299 5.4765e-01 1.5795e-01 insignificant 1.000e+00 1.0000e+00 insignificant 6.0977e-01 3.1801e-01 insignificant 1.000000 1.0000e+00 insignificant -0.00049519 9.9296e-01 lowCoverage 1.000000 lowCoverage chr15 39242946 39243946 131563 FAM92A2 ENSG00000157021 0.897368 135 6 0.755114 71 6 0.9045455 28 2 0.892529 99 6 0.5652681 32 2 0.719088 157 6 0.551282 31 2 0.750453 105 6 0.802041 56 5 0.736111 34 2 0.833897 159 6 0.725000 20 1 0.9293024 72 6 0.727273 33 3 0.940989 59 4 0.450000 11 0 0.666667 9 0 0.71316 107 6 0.860171 121 6 0.687675 134 6 0.708333 27 2 0.794643 50 3 0.816931 69 6 0.893750 52 6 0.87474 79 6 0.746934 127 6 0.7073232 91 6 0.647619 39 5 0.830159 77 5 0.802142 89 6 0.8628395 73 4 0.886971 173 6 0.638768 90 6 0.6388136 52 6 0.652381 98 6 0.966667 19 1 0.766667 55 5 0.8071618 74 5 0.701769 92 6 0.942901 100 6 0.796312 109 6 0.873764 70 6 0.903426 137 6 0.888028 0.668171 0.7998002 0.869723 0.7352255 0.831727 0.6458157 0.724503 0.729566 0.934066 0.812772 0.7472527 0.8580724 0.705794 0.883064 0.576830 0.881906 0.7931953 0.787608 0.768606 0.769231 0.79945055 0.771219 0.841209 0.82404 0.801060 0.7470315 0.6941915 0.783150 0.723374 0.82696 0.855316 0.738376 0.6978077 0.715751 0.986813 0.738462 0.7672953 0.842406 0.904558 0.853746 0.781886 0.839399 2 0.802326 0.797040 0.0041847 6 0.752462 0.7732869 -0.0208250 0.715584 0.737490 insignificant 1 1 insignificant 0.545240 0.942380 insignificant 1 1 insignificant -0.0423016 0.268832 lowCoverage 1 lowCoverage 0.802478 0.7319588 0.0726899 6 0.753165 0.6780220 0.07514341 2.2542e-03 9.8404e-01 weaklyHypermeth 9.8007e-02 1.0000e+00 weaklyHypermeth 6.8457e-02 8.1381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0103204 8.6928e-01 lowCoverage 1.0000e+00 lowCoverage 0.802444 0.883858 -0.0613280 6 0.767166 0.733281 0.0338853 7.9505e-01 0.0653185 insignificant 1.0000e+00 1.00000 insignificant 7.5429e-01 0.277586 insignificant 1.00000000 1 insignificant -0.0882378 1.2719e-01 lowCoverage 1.000000 lowCoverage 0.797240 0.7319588 0.0696766 6 0.7561308 0.6780220 0.0781088 4.7100e-03 9.7889e-01 weaklyHypermeth 1.9625e-01 1.0000e+00 insignificant 2.7869e-01 8.3255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0526220 3.9379e-01 lowCoverage 1.0000000 lowCoverage 0.797040 0.884921 -0.06409205 6 0.773287 0.711047 0.0622403 9.9931e-01 0.015911 weaklyHypometh 1.0000e+00 1 insignificant 9.9701e-01 0.065665 insignificant 1.000000 1 insignificant -0.045936 0.3789790 insignificant 1.00000 insignificant 0.7319588 0.888446 -0.1423494 6 0.6780220 0.914203 -0.2361808 1.0000e+00 8.6660e-06 weaklyHypometh 1.000e+00 8.6660e-04 weaklyHypometh 9.9935e-01 8.8604e-03 weaklyHypometh 1.000000 6.8157e-01 insignificant -0.09855822 1.8283e-01 lowCoverage 1.000000 lowCoverage chr15 39575753 39576753 131570 ITPKA ENSG00000137825 0.318961 98 2 0.317546 214 6 0.4602564 162 6 0.274217 112 2 0.5474806 55 2 0.163265 118 2 0.361742 59 2 0.372851 99 2 0.268056 87 2 0.291023 76 2 0.425714 74 2 0.254167 47 2 0.4222973 106 2 0.327381 77 2 0.286327 99 2 0.083333 49 2 0.000000 4 0 0.29735 111 2 0.591667 95 2 0.328166 102 6 0.253049 52 2 0.250000 36 2 0.220816 105 5 0.136752 51 2 0.49425 35 2 0.326084 215 6 0.1403584 119 2 0.116667 55 2 0.457931 104 2 0.253677 260 6 0.2896103 232 6 0.274230 88 5 0.964265 119 5 0.9807692 32 2 0.696894 123 5 0.833333 12 1 0.645716 68 2 0.8497646 113 5 0.337369 74 2 0.244009 75 2 0.250000 65 2 0.089015 80 2 0.264646 84 2 0.414979 0.485552 0.5005187 0.385925 0.5248913 0.449766 0.4751051 0.496581 0.352938 0.482466 0.517523 0.3302987 0.5308546 0.413639 0.329761 0.135838 0.000000 0.5431993 0.680925 0.439775 0.539969 0.25000000 0.384985 0.285905 0.59564 0.680744 0.2675816 0.2852601 0.572645 0.547374 0.62664 0.633322 0.906025 0.9686527 1.000000 0.938343 0.973007 0.9155155 0.330320 0.308210 0.407514 0.356542 0.269119 2 0.409978 0.409763 -0.0349699 2 0.334031 0.2193858 0.1146451 0.092997 0.767371 lowCoverage 1 1 lowCoverage 0.387127 0.770194 lowCoverage 1 1 lowCoverage 0.0518044 0.268849 lowCoverage 1 lowCoverage 0.409978 0.8822270 -0.5221530 2 0.334031 0.7062450 -0.37221411 9.9136e-01 2.5630e-25 lowCoverage 1.0000e+00 2.5630e-22 lowCoverage 9.9849e-01 1.6598e-09 lowCoverage 1.0000e+00 1.6598e-06 lowCoverage -0.5088671 3.3776e-05 lowCoverage 6.7551e-03 lowCoverage 0.409978 0.335979 0.0992212 2 0.334031 0.213728 0.1203024 2.7860e-02 0.8265246 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.9014e-02 0.984058 lowCoverage 1.00000000 1 lowCoverage 0.0825820 1.3920e-01 lowCoverage 1.000000 lowCoverage 0.409763 0.8822270 -0.5117782 5 0.2193858 0.7062450 -0.4868593 1.0000e+00 3.8402e-20 hypomethylated 1.0000e+00 3.8402e-17 hypomethylated 1.0000e+00 2.7531e-08 hypomethylated 1.0000e+00 2.7531e-05 hypomethylated -0.5606715 1.3855e-05 lowCoverage 0.0023091 lowCoverage 0.409763 0.335979 0.13953354 2 0.219386 0.213728 0.0056573 1.3401e-01 0.818146 lowCoverage 1.0000e+00 1 lowCoverage 2.8121e-01 0.989802 lowCoverage 1.000000 1 lowCoverage 0.030778 0.5732121 lowCoverage 1.00000 lowCoverage 0.8822270 0.335979 0.5962958 2 0.7062450 0.213728 0.4925166 9.3050e-15 1.0000e+00 lowCoverage 9.305e-12 1.0000e+00 lowCoverage 3.6776e-05 1.0000e+00 lowCoverage 0.036776 1.0000e+00 lowCoverage 0.59144910 1.5840e-05 lowCoverage 0.015840 lowCoverage chr15 40659991 40660991 131586 ENSG00000184935 0.509866 242 6 0.864167 86 5 0.8523955 119 5 0.788889 120 6 0.7279449 63 3 0.385823 170 6 0.668889 53 5 0.840366 69 5 0.803223 54 5 0.933333 40 5 0.878396 155 5 0.783462 57 5 0.8316667 59 5 NA 0 0 0.757557 86 5 0.748918 42 5 0.808833 89 5 0.48003 147 6 0.843663 66 5 0.412625 174 6 0.700000 13 2 0.770000 29 2 0.419259 146 8 0.733333 36 4 0.92857 14 2 0.400329 188 6 0.9375000 19 2 0.586111 23 2 0.842442 103 5 0.534802 193 6 0.3472302 172 6 0.482063 216 6 0.658571 47 4 0.7516667 55 5 0.711111 66 5 0.631111 25 2 0.906349 54 5 0.5068376 149 6 0.598100 169 6 0.562610 197 6 0.537527 185 6 0.560987 230 6 0.366999 197 6 0.722852 0.811893 0.8067294 0.689783 0.6105068 0.709153 0.6020496 0.828358 0.793961 0.870550 0.827853 0.6736370 0.7633495 NA 0.750226 0.606775 0.729546 0.7217753 0.785949 0.761271 0.857213 0.77346278 0.729348 0.804207 0.91377 0.765192 0.8960481 0.6914779 0.742314 0.783392 0.75258 0.740809 0.584605 0.6278317 0.721991 0.613808 0.854831 0.8405527 0.860032 0.811540 0.797701 0.771036 0.789308 2 0.781597 0.761572 -0.0232174 6 0.395371 0.4033778 -0.0080068 0.999147 0.115794 insignificant 1 1 insignificant 0.999895 0.488057 insignificant 1 1 insignificant 0.0924975 0.205934 lowCoverage 1 lowCoverage 0.784157 0.7121212 0.0520831 6 0.510803 0.4482701 0.06253337 4.0175e-01 5.8238e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5584e-01 6.9922e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0383597 5.7475e-01 lowCoverage 1.0000e+00 lowCoverage 0.781780 0.803077 -0.0577989 6 0.379274 0.396517 -0.0172426 1.0000e+00 0.2834148 insignificant 1.0000e+00 1.00000 insignificant 1.0000e+00 0.298996 insignificant 1.00000000 1 insignificant 0.2073898 2.8904e-03 lowCoverage 0.440572 lowCoverage 0.774510 0.7121212 0.0735809 6 0.5294392 0.4482701 0.0811691 8.7340e-03 9.5808e-01 weaklyHypermeth 3.1193e-01 1.0000e+00 insignificant 2.9925e-01 9.3661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0541378 5.1383e-01 lowCoverage 1.0000000 lowCoverage 0.760453 0.800613 -0.03276623 6 0.357333 0.322170 0.0351635 8.1377e-01 0.824027 insignificant 1.0000e+00 1 insignificant 9.8686e-01 0.946970 insignificant 1.000000 1 insignificant 0.114892 0.1335967 lowCoverage 1.00000 lowCoverage 0.7121212 0.811203 -0.1058423 6 0.4482701 0.544969 -0.0966986 9.9929e-01 1.2489e-01 insignificant 1.000e+00 1.0000e+00 insignificant 9.9209e-01 6.7309e-01 insignificant 1.000000 1.0000e+00 insignificant 0.16903014 3.5393e-02 lowCoverage 1.000000 lowCoverage chr15 41639535 41640535 131617 MAP1A ENSG00000166963 0.868246 301 4 0.859089 143 5 0.9670034 76 4 0.705160 309 4 1.0000000 23 3 0.903838 294 5 0.918913 85 4 0.902657 93 6 0.857143 29 2 0.985714 30 2 0.896690 200 7 0.750000 31 2 0.8438829 171 7 NA 0 0 0.883553 88 4 0.975000 34 4 0.630952 27 2 0.80374 305 5 0.796484 118 7 0.648272 232 5 0.642857 21 2 0.886349 99 6 0.670323 81 4 0.901099 42 4 0.95312 48 4 0.840315 212 6 0.7254896 97 5 1.000000 26 3 0.987183 162 6 0.991648 258 6 0.9030766 224 7 0.864720 276 7 0.996154 129 4 0.9036341 149 7 0.956250 85 2 0.857143 23 2 0.911905 28 3 0.9938776 191 7 0.893709 274 4 0.867715 316 4 0.981844 339 4 0.781015 241 4 0.701562 307 4 0.929587 0.930884 0.9616628 0.949949 1.0000000 0.937089 0.9290050 0.929926 0.950495 0.960396 0.919296 0.9504950 0.9440830 NA 0.940968 0.987624 0.828383 0.9471873 0.933191 0.946068 0.915842 0.95445545 0.914840 0.855511 0.95666 0.956897 0.9284750 1.0000000 0.964468 0.990175 0.93555 0.920238 0.992384 0.9627931 0.926535 1.000000 0.899340 0.9830269 0.928788 0.959269 0.962133 0.927538 0.972543 2 0.936655 0.934023 -0.0037532 5 0.857194 0.8966156 -0.0394212 0.354843 0.063270 insignificant 1 1 insignificant 0.537177 0.155746 insignificant 1 1 insignificant -0.0114101 0.794971 lowCoverage 1 lowCoverage 0.936655 0.9586777 -0.0275706 5 0.857194 0.9373837 -0.08018937 9.8372e-01 1.8950e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9342e-01 4.1820e-03 weaklyHypometh 1.0000e+00 6.9701e-01 insignificant -0.0840551 2.2126e-02 lowCoverage 1.0000e+00 lowCoverage 0.936655 0.960054 -0.0057089 4 0.857194 0.849291 0.0079036 6.8982e-01 0.3979729 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.3011e-01 0.526539 lowCoverage 1.00000000 1 lowCoverage 0.0072698 8.9727e-01 lowCoverage 1.000000 lowCoverage 0.934023 0.9586777 -0.0230164 5 0.8966156 0.9373837 -0.0407681 8.5237e-01 4.9936e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8754e-01 2.2372e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0726450 1.0409e-01 lowCoverage 1.0000000 lowCoverage 0.934023 0.960054 -0.00705676 4 0.896616 0.849291 0.0473248 4.1275e-01 0.515586 lowCoverage 1.0000e+00 1 lowCoverage 6.1677e-01 0.726341 lowCoverage 1.000000 1 lowCoverage 0.018680 0.7623809 lowCoverage 1.00000 lowCoverage 0.9586777 0.960054 0.0098501 4 0.9373837 0.849291 0.0880930 1.0847e-01 7.9894e-01 lowCoverage 1.000e+00 1.0000e+00 lowCoverage 7.5913e-02 9.9413e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.09132484 1.3873e-01 lowCoverage 1.000000 lowCoverage chr15 41739046 41740046 131626 ENSG00000218088 0.927910 266 7 0.792325 154 7 0.8631929 95 5 0.602655 268 4 0.7678571 39 4 0.926946 295 4 0.949199 90 4 0.892595 127 7 0.942857 24 3 0.957143 63 5 0.891565 205 7 0.972222 20 2 0.8369615 133 7 NA 0 0 0.707143 76 4 0.785714 29 2 0.766667 30 3 0.90000 303 4 0.917278 147 7 0.879568 210 5 0.777778 22 2 0.935081 95 5 0.593037 103 4 0.973333 48 4 0.88782 47 4 0.776515 207 6 0.9871032 69 5 0.800000 28 2 0.905434 152 4 0.887827 226 6 0.9664966 218 6 0.804005 239 7 0.892453 128 4 0.8908269 158 7 0.925926 70 4 0.958333 25 4 0.982143 51 5 0.9980431 193 7 0.889053 283 4 0.863443 292 7 0.984961 345 4 0.787073 206 4 0.888114 315 5 0.958057 0.852712 0.9277141 0.935904 0.9572917 0.947389 0.9678491 0.929041 0.902381 0.952500 0.906694 0.9421116 0.9665476 NA 0.903155 0.866667 0.926389 0.9750000 0.936470 0.921822 0.881944 0.94573757 0.912850 0.952222 0.92476 0.940193 0.9721726 0.9500000 0.929543 0.926426 0.98083 0.925448 0.962107 0.9530039 0.919042 0.936444 0.988542 0.9948630 0.949334 0.929620 0.973669 0.937082 0.978639 2 0.935897 0.939477 -0.0057760 5 0.881564 0.8853219 -0.0037580 0.734489 0.543051 insignificant 1 1 insignificant 0.714064 0.431896 insignificant 1 1 insignificant -0.0010379 0.979344 lowCoverage 1 lowCoverage 0.935897 0.9648000 -0.0329967 5 0.881564 0.9450606 -0.06349666 9.4567e-01 1.3781e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9748e-01 5.1610e-03 weaklyHypometh 1.0000e+00 7.3728e-01 insignificant -0.0844560 9.0470e-03 lowCoverage 6.4621e-01 lowCoverage 0.935897 0.965302 -0.0114466 4 0.881564 0.887384 -0.0058202 8.6838e-01 0.2419168 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.3488e-01 0.368716 lowCoverage 1.00000000 1 lowCoverage -0.0256974 5.2468e-01 lowCoverage 1.000000 lowCoverage 0.939477 0.9648000 -0.0251061 5 0.8853219 0.9450606 -0.0597387 9.7421e-01 4.7506e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9782e-01 5.0987e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0834181 4.1760e-02 lowCoverage 1.0000000 lowCoverage 0.939477 0.965302 -0.00844107 4 0.885322 0.887384 -0.0020622 8.3386e-01 0.303851 lowCoverage 1.0000e+00 1 lowCoverage 9.2009e-01 0.490777 lowCoverage 1.000000 1 lowCoverage -0.024660 0.5978695 lowCoverage 1.00000 lowCoverage 0.9648000 0.965302 0.0121585 4 0.9450606 0.887384 0.0576764 5.4694e-02 9.5468e-01 lowCoverage 1.000e+00 1.0000e+00 lowCoverage 7.8542e-02 9.9834e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.05875858 1.5599e-01 lowCoverage 1.000000 lowCoverage chr15 41763269 41764269 131649 HISPPD2A ENSG00000168781 0.734286 85 3 0.823611 64 6 0.9583333 36 2 0.796457 81 6 0.9190476 34 6 0.846065 59 5 0.638889 23 2 0.780612 59 6 0.666667 9 0 0.944444 10 0 0.824106 135 6 0.656250 11 1 0.7959184 26 1 0.755556 16 3 0.625000 9 0 0.800000 7 1 0.666667 15 1 0.80096 79 3 0.833333 21 2 0.889881 37 6 0.857143 25 1 0.857143 14 2 0.942708 43 1 0.776190 39 6 0.94444 23 2 0.891534 72 5 0.6335678 43 5 0.800000 6 0 0.861111 25 1 0.912834 95 5 0.9470744 95 5 0.816729 66 5 0.715136 72 5 0.9039216 94 6 0.914646 90 6 NA 0 0 0.858466 36 5 0.7015873 87 5 0.805556 79 5 0.754103 129 6 0.792806 107 3 0.709150 61 1 0.897224 118 6 0.805882 0.745098 0.9117647 0.749091 0.8403361 0.742647 0.3823529 0.911765 0.705882 0.901961 0.759591 0.8897059 0.8739496 0.760784 0.852941 0.738071 0.816503 0.8717949 0.852941 0.788866 1.000000 0.81846113 0.898897 0.882353 0.90196 0.868347 0.4278075 1.0000000 0.813725 0.807002 0.94790 0.944272 0.781513 0.8200692 0.852941 NA 0.809524 0.7647059 0.696078 0.868879 0.759930 0.878893 0.869634 0 0.805147 0.886447 -0.0470228 3 0.762226 0.8042525 -0.0420266 0.992436 0.046631 lowCoverage 1 1 lowCoverage 0.982064 0.106830 lowCoverage 1 1 lowCoverage -0.0655692 0.066472 lowCoverage 1 lowCoverage 0.805147 0.8786280 -0.0322538 3 0.762226 0.7511136 0.01111227 9.4550e-01 1.3939e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.8643e-01 6.9784e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0309472 5.6766e-01 lowCoverage 1.0000e+00 lowCoverage 0.805147 0.779352 -0.0163879 4 0.762226 0.816394 -0.0541685 8.4296e-01 0.5285759 lowCoverage 1.0000e+00 1.00000 lowCoverage 5.9884e-01 0.830986 lowCoverage 1.00000000 1 lowCoverage -0.0039637 9.2017e-01 lowCoverage 1.000000 lowCoverage 0.886447 0.8786280 0.0182682 5 0.8042525 0.7511136 0.0531389 5.3131e-01 7.4542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7650e-01 9.6793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0346220 5.3448e-01 lowCoverage 1.0000000 lowCoverage 0.886447 0.779352 0.03328460 5 0.804253 0.816394 -0.0121418 2.8332e-01 0.944125 insignificant 1.0000e+00 1 insignificant 1.3509e-01 0.989321 insignificant 1.000000 1 insignificant 0.061606 0.1611013 lowCoverage 1.00000 lowCoverage 0.8786280 0.779352 0.0096683 5 0.7511136 0.816394 -0.0652807 3.7727e-01 8.0128e-01 insignificant 1.000e+00 1.0000e+00 insignificant 6.0978e-01 8.8605e-01 insignificant 1.000000 1.0000e+00 insignificant 0.02698356 6.4277e-01 lowCoverage 1.000000 lowCoverage chr15 43007671 43008671 131740 ENSG00000212424 0.689456 104 4 0.559394 42 4 0.4523810 46 5 0.741342 105 4 0.8083333 20 1 0.740172 224 5 0.418235 29 2 0.674194 49 2 0.651429 31 2 0.933333 23 1 0.685238 54 5 0.475000 18 1 0.7625225 57 2 NA 0 0 0.809524 18 1 0.777778 10 1 0.800000 18 1 0.74736 92 5 0.777778 56 4 0.754134 165 5 0.708333 11 1 0.672054 58 4 0.668067 55 2 0.657843 27 1 0.56239 27 2 0.780617 111 5 0.7133333 29 3 0.833333 14 1 0.866667 23 1 0.772381 99 5 0.7493152 110 5 0.714038 214 5 0.541667 70 2 0.6399267 27 2 0.628655 49 3 0.266667 7 0 0.906250 18 1 0.7013534 104 5 0.818889 81 4 0.824722 96 5 0.790956 75 5 0.788103 57 5 0.801538 71 5 0.831172 0.727146 0.6141865 0.859465 0.8298611 0.808385 0.7472426 0.785506 0.779762 0.965278 0.807937 0.7609168 0.8459084 NA 0.822918 0.854615 0.895833 0.8533672 0.884259 0.834157 0.781902 0.78752806 0.819153 0.656352 0.77048 0.810017 0.7756944 0.9076073 0.930556 0.806647 0.77441 0.837323 0.638889 0.5095772 0.829739 0.243056 0.727498 0.7378081 0.855671 0.866464 0.873699 0.870241 0.915865 1 0.780362 0.785347 -0.0075783 5 0.714050 0.7401959 -0.0261459 0.632110 0.247696 insignificant 1 1 insignificant 0.343235 0.520708 insignificant 1 1 insignificant -0.0270958 0.493500 lowCoverage 1 lowCoverage 0.780362 0.6690909 0.1222529 4 0.714050 0.6432248 0.07082520 2.4349e-05 7.2203e-01 lowCoverage 1.3527e-03 1.0000e+00 lowCoverage 1.2085e-02 9.6961e-01 lowCoverage 6.7138e-01 1.0000e+00 lowCoverage 0.0836824 3.9138e-01 lowCoverage 1.0000e+00 lowCoverage 0.780362 0.852632 -0.0568777 5 0.714050 0.803071 -0.0890209 9.4250e-01 0.0019180 weaklyHypometh 1.0000e+00 0.47949 insignificant 7.3000e-01 0.022270 weaklyHypometh 1.00000000 1 insignificant -0.1070730 3.0840e-03 lowCoverage 0.440572 lowCoverage 0.785347 0.6690909 0.1280617 4 0.7401959 0.6432248 0.0969711 2.2811e-04 9.6984e-01 lowCoverage 1.2673e-02 1.0000e+00 lowCoverage 8.1501e-03 9.5601e-01 lowCoverage 4.5278e-01 1.0000e+00 lowCoverage 0.1107781 2.6058e-01 lowCoverage 1.0000000 lowCoverage 0.785347 0.852632 -0.04689847 5 0.740196 0.803071 -0.0628750 9.1430e-01 0.008610 weaklyHypometh 1.0000e+00 1 insignificant 8.9629e-01 0.018845 weaklyHypometh 1.000000 1 insignificant -0.079977 0.0070311 lowCoverage 1.00000 lowCoverage 0.6690909 0.852632 -0.1785594 4 0.6432248 0.803071 -0.1598461 9.9996e-01 1.5919e-04 lowCoverage 1.000e+00 1.2245e-02 lowCoverage 9.9901e-01 5.1851e-03 lowCoverage 1.000000 4.7137e-01 lowCoverage -0.19075534 7.6310e-02 lowCoverage 1.000000 lowCoverage chr15 45254379 45255379 131848 ENSG00000214983 0.833129 390 12 0.790293 110 8 0.8048817 113 10 0.784815 283 12 0.7309524 52 5 0.774527 385 12 0.852778 54 4 0.880780 75 5 0.711538 73 4 0.902178 122 9 0.772217 223 12 0.769231 41 3 0.7981188 107 9 NA 0 0 0.788228 80 8 0.785714 26 3 0.725641 40 3 0.85318 345 12 0.790589 135 11 0.837174 395 12 0.925325 66 5 0.826605 110 8 0.834227 163 9 0.854167 56 4 0.78194 120 6 0.788046 194 11 0.6485038 133 6 1.000000 13 0 0.755787 62 6 0.818437 184 11 0.8145444 165 11 0.820134 367 12 0.737546 136 12 0.6322887 118 9 0.765901 255 12 0.853836 62 7 0.682540 35 3 0.6829026 184 12 0.867315 362 12 0.821317 465 12 0.796101 342 12 0.852147 257 9 0.865018 364 12 0.882131 0.837018 0.8000712 0.843683 0.7523810 0.788929 0.9193122 0.895003 0.823413 0.867294 0.841939 0.9206349 0.8866797 NA 0.849773 0.814699 0.771164 0.8495414 0.841024 0.822473 0.897959 0.80081919 0.901069 0.854949 0.85987 0.848593 0.9005651 0.9533351 0.841160 0.874047 0.83477 0.860569 0.818663 0.7760369 0.829762 0.864827 0.737906 0.7961485 0.897814 0.871733 0.853168 0.820236 0.891301 2 0.829124 0.823025 -0.0041896 11 0.832208 0.8421831 -0.0099753 0.951233 0.412328 insignificant 1 1 insignificant 0.975549 0.311911 insignificant 1 1 insignificant -0.0230480 0.411914 insignificant 1 insignificant 0.828900 0.7784810 0.0477253 12 0.820223 0.6873776 0.13284508 2.8866e-05 9.9462e-01 weaklyHypermeth 1.5193e-03 1.0000e+00 weaklyHypermeth 1.7821e-03 9.8556e-01 weaklyHypermeth 1.1881e-01 1.0000e+00 insignificant 0.0734257 7.1316e-02 insignificant 1.0000e+00 insignificant 0.829068 0.862011 -0.0262519 11 0.820223 0.844031 -0.0238085 9.7400e-01 0.1498417 insignificant 1.0000e+00 1.00000 insignificant 8.9262e-01 0.316973 insignificant 1.00000000 1 insignificant -0.0411180 4.4474e-02 weaklyHypometh 1.000000 insignificant 0.822699 0.7784810 0.0563369 11 0.8309105 0.6873776 0.1435329 1.4295e-04 9.6214e-01 weaklyHypermeth 8.4088e-03 1.0000e+00 weaklyHypermeth 3.4412e-03 9.9050e-01 weaklyHypermeth 2.2941e-01 1.0000e+00 insignificant 0.0964738 3.5996e-02 weaklyHypermeth 1.0000000 insignificant 0.822699 0.862011 -0.01773507 11 0.830911 0.844031 -0.0131206 9.5448e-01 0.482429 insignificant 1.0000e+00 1 insignificant 9.0316e-01 0.841332 insignificant 1.000000 1 insignificant -0.018070 0.5332088 insignificant 1.00000 insignificant 0.7794677 0.861857 -0.0647316 11 0.7402528 0.832034 -0.0917808 9.9515e-01 1.4657e-04 weaklyHypometh 1.000e+00 1.2214e-02 weaklyHypometh 9.9812e-01 3.3845e-03 weaklyHypometh 1.000000 3.5664e-01 insignificant -0.11454378 1.3971e-02 weaklyHypometh 1.000000 insignificant chr15 46493188 46494188 132036 DUT ENSG00000128951 0.80076 87 6 0.69238 184 5 0.75000 30 4 0.77237 61 6 0.92857 18 1 0.79817 321 6 0.75271 30 3 0.70717 105 4 0.81854 45 3 0.90797 65 3 0.77496 107 5 0.87500 10 0 0.88222 97 4 NA 0 0 0.91250 68 3 1.000000 7 0 0.540344 27 3 0.82639 67 5 0.728472 58 3 0.76109 232 6 0.87897 20 1 0.72917 67 5 0.78690 39 5 0.67917 35 4 0.81530 60 3 0.81217 197 5 0.82329 32 2 0.75000 15 1 0.73740 133 5 0.95561 170 6 0.81863 210 5 0.79725 342 6 0.790962 126 5 0.68761 55 4 0.277778 20 2 0.883333 38 3 0.80000 9 0 0.744618 239 6 0.74084 82 6 0.83750 84 5 0.69345 48 5 0.98851 95 3 0.77130 79 5 0.915908 0.92534 0.83648 0.93507 0.85445 0.93878 0.90315 0.89110 0.85368 0.91967 0.89631 0.95283 0.97597 NA 0.95660 0.971243 0.78032 0.98616 0.927280 0.92803 0.90364 0.92689 0.976415 0.889151 0.96271 0.96369 0.87119 0.85849 0.88535 0.96931 0.94969 0.93415 0.891707 0.89840 0.683651 0.946708 0.964003 0.930805 0.88739 0.992138 0.90566 0.986337 0.92304 1 0.86473 0.89091 -0.017311 6 0.76659 0.79712 -0.030524 0.94598 0.184210 insignificant 1 1 insignificant 0.97661 0.257125 insignificant 1 1 insignificant 0.0029046 0.927735 lowCoverage 1 lowCoverage 0.86473 0.880903 0.0159261 4 0.76659 0.74004 0.02655591 6.5901e-02 0.582737 lowCoverage 1.0000e+00 1 lowCoverage 3.4423e-01 0.80631 lowCoverage 1.0000e+00 1 lowCoverage 0.104176 0.29846746 lowCoverage 1.000000 lowCoverage 0.86473 0.90206 -0.0232688 5 0.76659 0.78524 -0.0186432 8.6602e-01 0.145683 insignificant 1.0000e+00 1 insignificant 9.6869e-01 0.099892 insignificant 1.0000000 1 insignificant -0.0047616 0.9356165 lowCoverage 1.00000 lowCoverage 0.89091 0.880903 0.029967 4 0.79712 0.74004 0.057080 1.1994e-02 0.911330 lowCoverage 3.1564e-01 1 lowCoverage 1.5115e-01 0.90841 lowCoverage 1.0000e+00 1 lowCoverage 0.101271 0.30876323 lowCoverage 1.00000 lowCoverage 0.89091 0.90206 -0.0098276 5 0.79712 0.78524 0.011881 6.2778e-01 0.413615 insignificant 1.0000e+00 1 insignificant 0.8400220 0.26630 insignificant 1.0000 1 insignificant -0.0076662 0.8947951 lowCoverage 1 lowCoverage 0.880903 0.90206 -0.037030 3 0.740037 0.78524 -0.045199 0.93546 4.9200e-02 lowCoverage 1 1.0000e+00 lowCoverage 0.98198 1.9946e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.1089375 0.316412 lowCoverage 1 lowCoverage chr15 47316308 47317308 132091 ENSG00000210823,ENSG00000222541 0.87027 103 4 0.66674 97 5 0.66349 25 3 0.75631 99 5 0.76000 19 2 0.72123 96 5 0.63590 41 3 0.68205 64 5 0.73333 34 3 0.77500 26 3 0.71143 77 5 0.50476 20 2 0.79939 32 5 0.81000 28 4 0.75576 37 3 0.553333 17 2 0.000000 2 0 0.73413 55 3 0.754286 53 5 0.74753 68 5 0.81286 29 4 1.00000 1 0 0.64762 45 2 0.70000 39 4 0.95743 40 2 0.76810 94 5 0.74121 29 2 0.63333 17 0 0.68911 89 5 0.78947 89 5 0.56602 58 5 0.83832 72 5 0.655291 69 5 0.46667 44 4 0.678773 80 5 0.600000 21 2 0.69649 72 5 0.903846 77 5 0.88611 78 4 0.86667 71 4 0.64040 63 5 0.80000 45 2 0.85348 71 5 0.875341 0.66896 0.61820 0.77895 0.87500 0.91327 0.74451 0.76042 0.81548 0.93080 0.82456 0.55697 0.84794 0.86696 0.81358 0.595238 0.61387 0.74702 0.833163 0.81598 0.78827 NA 0.761905 0.767857 0.91637 0.80378 0.85449 0.70536 0.86292 0.85528 0.82806 0.82784 0.754354 0.67262 0.748240 0.732143 0.756189 0.934753 0.91161 0.861979 0.81277 0.821429 0.87148 0 0.77644 0.77907 -0.018447 5 0.68654 0.52918 0.157358 0.49377 0.714757 insignificant 1 1 insignificant 0.88753 0.718912 insignificant 1 1 insignificant -0.0802077 0.155128 lowCoverage 1 lowCoverage 0.77710 0.760331 0.0143880 5 0.73077 0.64967 0.08109942 4.1584e-01 0.717466 insignificant 1.0000e+00 1 insignificant 7.9899e-01 0.80255 insignificant 1.0000e+00 1 insignificant 0.014902 0.83778598 lowCoverage 1.000000 lowCoverage 0.77755 0.91159 -0.0756558 4 0.73867 0.81184 -0.0731638 9.9315e-01 0.011602 lowCoverage 1.0000e+00 1 lowCoverage 9.8561e-01 0.032408 lowCoverage 1.0000000 1 lowCoverage -0.1275866 0.0564317 lowCoverage 1.00000 lowCoverage 0.78151 0.760331 0.041359 5 0.54169 0.64967 -0.107984 4.6950e-01 0.990859 insignificant 1.0000e+00 1 insignificant 6.0349e-01 0.85078 insignificant 1.0000e+00 1 insignificant 0.095109 0.20117723 lowCoverage 1.00000 lowCoverage 0.78655 0.91159 -0.0519606 4 0.79863 0.81184 -0.013206 9.3788e-01 0.055318 lowCoverage 1.0000e+00 1 lowCoverage 0.8947365 0.20358 lowCoverage 1.0000 1 lowCoverage -0.0473789 0.4335001 lowCoverage 1 lowCoverage 0.761773 0.91358 -0.090172 4 0.709537 0.82421 -0.114669 0.99621 2.9061e-02 lowCoverage 1 8.5474e-01 lowCoverage 0.98060 8.6196e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.1424883 0.084773 lowCoverage 1 lowCoverage chr15 49372455 49373455 132160 CYP19A1 ENSG00000137869 0.83004 184 7 0.77447 231 7 0.92829 103 7 0.75000 57 5 0.88663 90 7 0.83885 227 9 0.71070 61 5 0.96455 163 7 0.77634 78 7 0.96089 132 7 0.81129 347 9 0.95556 34 4 0.84407 186 7 0.75000 36 3 0.71896 129 7 0.650926 46 3 0.694444 25 1 0.89545 78 7 0.900536 232 7 0.87368 225 8 0.75410 85 7 0.97403 57 3 0.96509 135 7 0.84360 99 7 0.88968 41 4 0.87483 231 7 0.69425 184 7 0.70583 52 7 0.81270 174 7 0.80851 241 8 0.93392 146 7 0.80300 319 7 0.859258 123 7 0.72674 144 7 0.779049 106 7 0.759788 62 5 0.83698 91 5 0.870854 205 7 0.91671 125 7 0.70141 240 7 0.82673 127 7 0.72792 123 7 0.93659 153 7 0.897652 0.85035 0.90776 0.97409 0.87332 0.91629 0.82522 0.95216 0.84839 0.92606 0.89834 0.94288 0.94623 0.81781 0.93600 0.819430 0.75389 0.95820 0.936254 0.93565 0.89215 0.98116 0.964614 0.925904 0.92524 0.92922 0.88785 0.86533 0.94824 0.91774 0.94612 0.92969 0.817269 0.73112 0.792264 0.730225 0.802402 0.825899 0.94803 0.922270 0.85676 0.937013 0.94975 3 0.89565 0.91383 -0.013137 7 0.84100 0.81356 0.027442 0.52537 0.297634 insignificant 1 1 insignificant 0.71227 0.261318 insignificant 1 1 insignificant -0.0125110 0.718500 insignificant 1 insignificant 0.89549 0.797538 0.1035222 7 0.82334 0.81467 0.00867110 7.4712e-13 0.135604 weaklyHypermeth 6.2260e-11 1 weaklyHypermeth 2.3933e-05 0.37841 weaklyHypermeth 2.1758e-03 1 weaklyHypermeth 0.020340 0.53501409 insignificant 1.000000 insignificant 0.89565 0.90755 -0.0151056 7 0.84100 0.85819 -0.0171861 8.6738e-01 0.410534 insignificant 1.0000e+00 1 insignificant 9.5092e-01 0.547674 insignificant 1.0000000 1 insignificant 0.0039113 0.9428458 insignificant 1.00000 insignificant 0.91391 0.797538 0.114730 7 0.80396 0.81467 -0.010709 7.3321e-14 0.031047 weaklyHypermeth 1.2220e-11 1 weaklyHypermeth 2.0355e-06 0.13634 weaklyHypermeth 3.3925e-04 1 weaklyHypermeth 0.032851 0.37630324 insignificant 1.00000 insignificant 0.91383 0.90755 -0.0019837 7 0.81356 0.85819 -0.044629 6.8228e-01 0.376970 insignificant 1.0000e+00 1 insignificant 0.9157514 0.73334 insignificant 1.0000 1 insignificant 0.0164223 0.7734409 insignificant 1 insignificant 0.797538 0.90743 -0.101610 7 0.814667 0.84243 -0.027767 0.71609 3.5837e-06 weaklyHypometh 1 3.5837e-04 weaklyHypometh 0.59695 1.4304e-03 weaklyHypometh 1 1.1920e-01 insignificant -0.0164286 0.768644 insignificant 1 insignificant chr15 50455800 50456800 132176 MYO5A ENSG00000197535 0.88186 132 5 0.65399 151 5 0.84210 73 5 0.79789 75 5 0.79881 64 4 0.77900 208 5 0.67349 75 4 0.86920 101 5 0.86851 90 5 0.81754 82 5 0.80390 199 7 0.65925 55 4 0.87636 115 5 0.88000 26 2 0.85975 85 5 0.863636 35 4 0.854978 49 3 0.69366 91 5 0.814299 81 5 0.79850 165 5 0.80000 30 3 0.88000 34 4 0.86140 89 5 0.74813 83 5 0.90909 32 3 0.74805 158 5 0.69485 54 5 0.79167 40 5 0.79902 103 5 0.92585 144 5 0.81919 135 5 0.76312 226 5 0.870210 169 5 0.78235 70 4 0.877333 122 5 0.508333 17 2 0.76683 64 5 0.938107 169 5 0.84506 110 5 0.90302 100 5 0.88312 74 4 0.80717 97 5 0.89643 84 5 0.886563 0.77251 0.83811 0.78884 0.85540 0.82909 0.78357 0.93848 0.86199 0.86473 0.82804 0.64828 0.85851 0.83034 0.85214 0.842510 0.77844 0.93510 0.846428 0.83396 0.86479 0.87412 0.840314 0.832711 0.89677 0.90917 0.67269 0.84977 0.87218 0.90302 0.88377 0.85932 0.799538 0.74420 0.901690 0.579519 0.785438 0.923520 0.79958 0.858735 0.92638 0.770559 0.89751 3 0.84016 0.86082 -0.026483 5 0.70864 0.73530 -0.026661 0.80373 0.048606 weaklyHypometh 1 1 insignificant 0.97110 0.099102 insignificant 1 1 insignificant -0.0073609 0.783472 lowCoverage 1 lowCoverage 0.84146 0.851064 -0.0056511 5 0.80987 0.84980 -0.03992538 2.3182e-01 0.015715 weaklyHypometh 1.0000e+00 1 insignificant 4.8183e-01 0.13049 insignificant 1.0000e+00 1 insignificant 0.013809 0.83771063 lowCoverage 1.000000 lowCoverage 0.84146 0.82796 -0.0074935 5 0.80987 0.86494 -0.0550697 7.9492e-01 0.222447 insignificant 1.0000e+00 1 insignificant 8.4385e-01 0.128878 insignificant 1.0000000 1 insignificant -0.0626227 0.0261246 lowCoverage 1.00000 lowCoverage 0.86506 0.851064 0.023349 5 0.79272 0.84980 -0.057074 1.3768e-01 0.290493 insignificant 1.0000e+00 1 insignificant 4.0174e-01 0.60454 insignificant 1.0000e+00 1 insignificant 0.021170 0.75698846 lowCoverage 1.00000 lowCoverage 0.86506 0.82796 0.0199339 5 0.79272 0.86494 -0.072219 8.3645e-02 0.630025 insignificant 1.0000e+00 1 insignificant 0.2776542 0.54639 insignificant 1.0000 1 insignificant -0.0552618 0.0627206 lowCoverage 1 lowCoverage 0.851064 0.82796 -0.006254 5 0.849799 0.86494 -0.015144 0.48011 6.1859e-01 insignificant 1 1.0000e+00 insignificant 0.82752 7.1659e-01 insignificant 1 1.0000e+00 insignificant -0.0764316 0.283585 lowCoverage 1 lowCoverage chr15 50765923 50766923 132181 KIAA1370 ENSG00000047346 0.83746 112 9 0.74667 250 10 0.85946 163 10 0.85096 97 5 0.80000 25 3 0.80626 171 8 0.64000 22 4 0.79111 83 5 0.20000 14 1 0.87500 12 1 0.67824 163 5 0.90000 10 0 0.79444 63 5 0.87778 43 5 0.85714 33 5 0.875000 8 0 0.400000 9 0 0.86608 101 5 0.649660 44 1 0.80584 137 8 0.79167 28 3 0.68214 29 4 0.76167 67 7 1.00000 31 1 0.80000 31 5 0.84361 207 10 0.90192 54 4 0.80000 10 1 0.92500 79 5 0.89604 218 10 0.82002 221 10 0.85095 226 10 0.838672 264 10 0.69841 46 5 0.819444 147 10 0.700000 20 0 0.76429 38 4 0.788193 219 10 0.76091 105 9 0.87462 106 6 0.82391 128 9 0.77083 64 5 0.92321 109 9 0.852696 0.69190 0.83333 0.79728 0.93333 0.82254 0.70000 0.82593 0.33333 0.86252 0.76747 0.83333 0.82870 0.89815 1.00000 0.891877 0.47521 0.83449 0.751984 0.83306 0.70833 0.73333 0.594841 1.000000 0.93333 0.79167 0.89904 0.83333 0.93750 0.82338 0.82469 0.81616 0.829587 0.81481 0.822222 0.750000 0.891667 0.814214 0.73849 0.818187 0.84783 0.861111 0.89583 0 0.83141 0.87677 -0.024700 5 0.79739 0.84732 -0.049937 0.93286 0.030424 weaklyHypometh 1 1 insignificant 0.89848 0.073422 insignificant 1 1 insignificant -0.0838634 0.079763 lowCoverage 1 lowCoverage 0.83141 0.846049 0.0037437 5 0.79739 0.78373 0.01366038 4.5050e-02 0.419552 weaklyHypermeth 1.0000e+00 1 insignificant 9.5864e-02 0.59933 insignificant 1.0000e+00 1 insignificant -0.012613 0.78723660 lowCoverage 1.000000 lowCoverage 0.83141 0.82227 -0.0111516 5 0.79739 0.81871 -0.0213213 5.6134e-01 0.092229 insignificant 1.0000e+00 1 insignificant 5.6014e-01 0.451793 insignificant 1.0000000 1 insignificant -0.0751427 0.1504076 lowCoverage 1.00000 lowCoverage 0.87677 0.846049 0.027052 10 0.84732 0.78373 0.063597 1.8428e-02 0.929726 weaklyHypermeth 4.7252e-01 1 insignificant 1.8208e-02 0.92682 weaklyHypermeth 5.2024e-01 1 insignificant 0.071250 0.05616182 insignificant 1.00000 insignificant 0.87677 0.82227 0.0166817 6 0.84732 0.81871 0.028616 4.1069e-01 0.479060 insignificant 1.0000e+00 1 insignificant 0.4340047 0.88948 insignificant 1.0000 1 insignificant 0.0087207 0.8285833 insignificant 1 insignificant 0.846049 0.82227 -0.016956 6 0.783727 0.81871 -0.034982 0.86465 3.5011e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.89440 1.8443e-01 insignificant 1 1.0000e+00 insignificant -0.0625297 0.148951 insignificant 1 insignificant chr15 50885487 50886487 132196 ONECUT1 ENSG00000169856 0.14492 1269 21 0.22479 971 21 0.39490 646 21 0.11160 1132 21 0.28914 562 21 0.16705 1472 21 0.46595 669 21 0.17067 769 21 0.17178 978 21 0.20530 1076 21 0.21722 739 21 0.10952 859 21 0.71115 675 21 0.13006 800 21 0.40064 906 21 0.080575 635 21 0.034753 224 10 0.07750 1432 21 0.090783 618 21 0.28900 926 20 0.24965 238 17 0.14578 649 21 0.11560 754 21 0.12271 502 21 0.20500 786 21 0.73998 822 21 0.27364 628 21 0.11223 362 21 0.37944 683 20 0.87866 885 21 0.13817 1020 21 0.20102 1156 21 0.067019 843 21 0.13207 463 21 0.077416 816 21 0.021429 117 9 0.10647 716 21 0.071246 968 21 0.12362 1800 21 0.18804 1157 21 0.38658 1296 21 0.12528 1100 20 0.12451 1156 21 0.086837 0.17705 0.43315 0.08866 0.30490 0.13929 0.42927 0.15093 0.14810 0.16465 0.17526 0.11778 0.82894 0.12920 0.33790 0.059792 0.10350 0.08519 0.054893 0.19438 0.17145 0.11849 0.088994 0.031749 0.17562 0.73000 0.21728 0.11841 0.27148 0.86716 0.13267 0.10733 0.070203 0.09523 0.080759 0.029288 0.061845 0.075158 0.14704 0.089602 0.37015 0.080969 0.10864 20 0.20469 0.30084 -0.085136 21 0.22079 0.30971 -0.088918 1.00000 0.045199 weaklyHypometh 1 1 insignificant 0.99992 0.905576 insignificant 1 1 insignificant -0.0724598 0.388729 insignificant 1 insignificant 0.20467 0.077276 0.1394399 21 0.21474 0.13148 0.08326483 3.6452e-11 1.000000 weaklyHypermeth 2.2783e-09 1 weaklyHypermeth 2.2573e-18 1.00000 weaklyHypermeth 2.2573e-15 1 weaklyHypermeth 0.145089 0.00129849 weaklyHypermeth 0.144276 insignificant 0.20448 0.17130 0.0376247 21 0.20181 0.20407 -0.0022561 3.6674e-01 0.999973 insignificant 1.0000e+00 1 insignificant 4.1482e-01 0.983674 insignificant 1.0000000 1 insignificant 0.0347589 0.5926585 insignificant 1.00000 insignificant 0.30084 0.077237 0.228965 21 0.29132 0.12710 0.164227 1.7387e-09 1.000000 hypermethylated 1.2419e-07 1 hypermethylated 2.6663e-13 1.00000 hypermethylated 2.6663e-10 1 hypermethylated 0.217548 0.01317949 weaklyHypermeth 0.57302 insignificant 0.30053 0.17130 0.1294377 21 0.27723 0.20407 0.073162 3.8450e-02 1.000000 weaklyHypermeth 1.0000e+00 1 insignificant 0.2041299 0.99863 insignificant 1.0000 1 insignificant 0.1072187 0.2477004 insignificant 1 insignificant 0.076825 0.17128 -0.096526 21 0.069726 0.18915 -0.119427 1.00000 5.5157e-10 weaklyHypometh 1 1.8386e-07 weaklyHypometh 1.00000 1.6728e-11 weaklyHypometh 1 1.6728e-08 weaklyHypometh -0.1103297 0.095155 insignificant 1 insignificant chr15 53678773 53679773 132378 PYGO1 ENSG00000171016 0.55707 93 5 0.75967 96 5 0.63333 21 2 0.61609 67 2 0.66667 28 2 0.71429 64 5 0.58471 58 5 0.70429 45 5 0.50794 32 4 0.57044 36 5 0.67130 125 5 0.73333 15 2 0.72576 58 5 0.45833 26 2 0.61714 31 5 0.702381 19 0 0.500000 2 0 0.69450 104 5 0.501389 59 5 0.77307 54 5 0.87500 6 0 1.00000 2 0 0.63492 47 2 0.74667 31 4 0.78897 38 2 0.75749 110 5 0.83333 17 2 0.33333 28 5 0.70563 70 5 0.79932 95 5 0.67483 76 5 0.71801 64 5 0.633752 110 5 0.59394 63 5 0.649123 83 5 0.800000 15 0 0.47194 58 5 0.612500 50 5 0.56190 69 5 0.81097 73 5 0.59134 90 5 0.46795 28 2 0.71178 114 5 0.744376 0.80185 0.78249 0.66141 0.66667 0.69774 0.66438 0.68390 0.75028 0.67645 0.67786 0.68191 0.75064 0.65678 0.76416 0.603107 0.66131 0.61736 0.519421 0.72608 0.79625 0.92597 0.802260 0.701695 0.75156 0.70159 0.70339 0.45763 0.73224 0.77684 0.64408 0.73793 0.650830 0.63482 0.680419 0.734463 0.612029 0.700212 0.65537 0.734292 0.60324 0.578553 0.73649 0 0.66957 0.69310 -0.021598 5 0.60492 0.72949 -0.124574 0.91980 0.499510 insignificant 1 1 insignificant 0.99295 0.124189 insignificant 1 1 insignificant -0.1043740 0.057553 lowCoverage 1 lowCoverage 0.66927 0.622691 0.0397357 5 0.66767 0.66708 0.00058542 1.2592e-01 0.897037 insignificant 1.0000e+00 1 insignificant 4.9006e-01 0.90405 insignificant 1.0000e+00 1 insignificant 0.007708 0.87676887 lowCoverage 1.000000 lowCoverage 0.67022 0.67112 0.0071967 5 0.69133 0.74938 -0.0580464 4.9646e-01 0.703576 insignificant 1.0000e+00 1 insignificant 4.9241e-01 0.827947 insignificant 1.0000000 1 insignificant 0.0057968 0.9308476 lowCoverage 1.00000 lowCoverage 0.69164 0.622691 0.070708 5 0.68099 0.66708 0.013907 2.5201e-02 0.902684 weaklyHypermeth 6.1466e-01 1 insignificant 4.7589e-02 0.98383 weaklyHypermeth 1.0000e+00 1 insignificant 0.112082 0.09764382 lowCoverage 1.00000 lowCoverage 0.69204 0.67112 0.0290764 5 0.69085 0.74938 -0.058533 4.2685e-01 0.804090 insignificant 1.0000e+00 1 insignificant 0.1939279 0.98075 insignificant 1.0000 1 insignificant 0.1101708 0.1796086 lowCoverage 1 lowCoverage 0.622691 0.67024 -0.032456 5 0.667083 0.70761 -0.040528 0.86402 3.9665e-01 insignificant 1 1.0000e+00 insignificant 0.70878 7.1581e-01 insignificant 1 1.0000e+00 insignificant -0.0019112 0.980016 lowCoverage 1 lowCoverage chr15 55588340 55589340 132497 ENSG00000211028 0.81473 181 5 0.64643 138 4 0.81477 56 5 0.86055 153 4 0.68320 33 3 0.84811 218 5 0.66667 56 3 0.86221 77 5 0.90513 46 4 0.81833 31 3 0.83673 183 5 0.68000 9 1 0.50833 23 3 0.80556 10 0 0.77190 34 3 1.000000 8 0 0.555556 8 0 0.74898 164 4 0.733333 107 4 0.82355 156 5 0.50500 29 2 0.42857 23 1 0.81229 84 4 0.77810 51 5 0.61306 37 4 0.69986 150 5 0.81786 70 5 0.83333 19 1 0.79310 77 3 0.66631 205 5 0.89520 178 5 0.89673 275 5 0.233805 132 5 0.50000 59 4 0.352871 149 5 0.000000 16 2 0.38687 148 5 0.288018 233 4 0.33128 208 5 0.51499 152 5 0.56443 177 3 0.53017 72 5 0.59567 152 4 0.790288 0.69525 0.81759 0.80550 0.54388 0.80083 0.62092 0.85265 0.86174 0.75180 0.83098 0.75294 0.62764 0.72411 0.73417 0.894640 0.71882 0.73845 0.691176 0.79748 0.45931 0.37530 0.778526 0.709991 0.70410 0.79733 0.80509 0.74837 0.78026 0.63606 0.85962 0.90099 0.160492 0.45098 0.207571 0.126070 0.284390 0.210091 0.30247 0.500607 0.59622 0.415989 0.48900 0 0.80071 0.82387 -0.031410 5 0.75867 0.66636 0.092310 0.81907 0.271665 insignificant 1 1 insignificant 0.52298 0.701814 insignificant 1 1 insignificant 0.0409202 0.429457 lowCoverage 1 lowCoverage 0.80095 0.341927 0.4784828 5 0.77707 0.29983 0.47724294 1.8181e-27 1.000000 hypermethylated 1.8181e-24 1 hypermethylated 7.9189e-10 1.00000 hypermethylated 1.9797e-07 1 hypermethylated 0.475609 0.00048978 lowCoverage 0.069969 lowCoverage 0.80071 0.58893 0.2526784 5 0.75867 0.45399 0.3046851 3.2242e-11 0.999969 hypermethylated 8.0606e-09 1 hypermethylated 1.2761e-05 0.999939 hypermethylated 0.0042538 1 hypermethylated 0.2618965 0.0017793 lowCoverage 0.44483 lowCoverage 0.82525 0.341927 0.499642 5 0.79963 0.29983 0.499805 2.2207e-20 1.000000 hypermethylated 2.2207e-17 1 hypermethylated 7.1657e-07 1.00000 hypermethylated 1.7914e-04 1 hypermethylated 0.434689 0.00048216 lowCoverage 0.06888 lowCoverage 0.82387 0.58893 0.2722209 5 0.66636 0.45399 0.212376 1.4318e-08 1.000000 hypermethylated 2.8636e-06 1 hypermethylated 0.0008304 1.00000 hypermethylated 0.2768 1 insignificant 0.2209763 0.0050193 lowCoverage 1 lowCoverage 0.341927 0.58971 -0.221429 5 0.299830 0.54478 -0.244954 0.99997 1.2303e-05 hypomethylated 1 1.1185e-03 hypomethylated 1.00000 9.7661e-05 hypomethylated 1 2.4415e-02 hypomethylated -0.2137126 0.032344 lowCoverage 1 lowCoverage chr15 63411279 63412279 133063 RNU5B-1 ENSG00000200156 0.92323 207 9 0.89262 237 6 0.72729 204 9 0.89370 213 6 0.91095 161 9 0.82998 401 9 0.71122 168 7 0.84429 162 9 0.91310 158 9 0.88351 187 9 0.84729 272 9 0.81310 107 7 0.93643 183 9 0.86679 131 6 0.90396 214 6 1.00000 86 7 1.00000 173 2 0.78230 243 5 0.92347 387 7 0.80706 314 9 0.78024 116 6 0.81298 75 3 0.71098 182 9 0.94717 78 4 0.98611 61 4 0.88887 253 9 0.74034 178 6 0.76485 90 8 0.85746 303 6 0.82259 312 9 0.87471 349 9 0.86423 406 9 0.5648377 232 8 0.4400880 227 6 0.6438172 252 6 0.510539 52 6 0.543024 172 9 0.456725 379 9 0.57935 229 9 0.85004 210 6 0.84207 188 6 0.84759 254 6 0.69360 199 10 0.85947 0.84765 0.79213 0.91616 0.90759 0.89166 0.83015 0.87692 0.92292 0.91541 0.85517 0.89615 0.911317 0.83725 0.89990 0.99897 0.99069 0.79743 0.93991 0.90234 0.81948 0.88806 0.84118 0.95546 0.94171 0.93158 0.85010 0.87699 0.90214 0.94864 0.92591 0.87802 0.5011433 0.16240460 0.73886394 0.3432814 0.562868 0.412884 0.724300 0.81666 0.858970 0.84504 0.84414 3 0.88165 0.87682 0.00996966 9 0.78884 0.72729 0.0615557 0.04350926 8.1761e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.3724249 0.80399604 insignificant 1 1.00000 insignificant 0.0329716 0.272595 insignificant 1.000 insignificant 0.88188 0.4680365 0.425531 9 0.77671 0.4178126 0.3588975 1.8296e-34 9.9986e-01 hypermethylated 2.0329e-32 1.0000e+00 hypermethylated 2.0719e-09 1.0000e+00 hypermethylated 1.2949e-07 1.0000e+00 hypermethylated 0.3440097 6.6909e-06 hypermethylated 3.6482e-04 hypermethylated 0.88154 0.78519 8.7545e-02 9 0.77260 0.67271 0.0998944 3.8950e-05 9.9918e-01 weaklyHypermeth 1.7705e-03 1.000000 weaklyHypermeth 1.7895e-02 0.9925718 weaklyHypermeth 4.8364e-01 1.00000 insignificant 0.1079858 1.1981e-01 insignificant 1.00000000 insignificant 0.87834 0.4680365 0.41478674 9 0.83473 0.4178126 0.4169176 1.0676e-20 9.9990e-01 hypermethylated 5.9308e-19 1.0000e+00 hypermethylated 2.9938e-09 1.0000e+00 hypermethylated 2.1384e-07 1.00000000 hypermethylated 0.311038 6.2757e-06 hypermethylated 3.1379e-04 hypermethylated 0.87651 0.78519 0.0799632 9 0.70631 0.67271 0.0336036 6.9692e-04 9.9974e-01 weaklyHypermeth 2.3231e-02 1.000000 weaklyHypermeth 1.8203e-02 0.99658916 weaklyHypermeth 5.5160e-01 1.00000 insignificant 0.0750142 2.5740e-01 insignificant 1.000000 insignificant 0.4680365 0.78571 -0.3424896 9 0.4178126 0.70411 -0.286295 9.9977e-01 5.4652e-07 hypomethylated 1.0000e+00 1.8845e-05 hypomethylated 9.9994e-01 1.7298e-04 hypomethylated 1.0000e+00 7.1477e-03 hypomethylated -0.236024 8.1944e-03 weaklyHypometh 1.9105e-01 insignificant chr15 63422470 63423470 133066 RNU5B-1 ENSG00000200156 0.96264 385 5 0.85978 272 6 0.62942 189 6 0.93077 371 6 0.87111 101 6 0.96119 432 6 0.92038 241 6 0.77884 171 6 0.90884 241 6 0.92183 148 5 0.95029 314 6 0.96245 124 5 0.93196 207 5 0.91055 80 5 0.94928 223 6 0.84401 116 5 0.79832 62 5 0.89386 462 5 0.97123 94 6 0.94141 262 6 0.60000 53 3 0.72101 134 5 0.91324 129 6 0.86905 75 5 0.87125 95 5 0.94396 346 6 0.66503 84 4 0.92051 68 5 0.92037 163 6 0.87058 289 6 0.94210 287 6 0.89372 365 6 0.6754308 216 6 0.6614198 120 5 0.8371951 244 3 0.791667 34 4 0.791612 189 6 0.761206 272 6 0.89196 395 6 0.89714 370 6 0.89076 292 5 0.85253 283 5 0.83655 440 6 0.96375 0.88659 0.66864 0.97061 0.86824 0.95064 0.91919 0.92553 0.90354 0.96690 0.96193 0.94553 0.926821 0.89605 0.93487 0.83027 0.79887 0.90285 0.96174 0.92502 0.76453 0.73669 0.91121 0.92529 0.86407 0.94262 0.84202 0.91516 0.94647 0.88767 0.95602 0.93287 0.7062112 0.74503341 0.81379102 0.7864424 0.821983 0.738849 0.888311 0.87565 0.860292 0.82939 0.85442 5 0.91457 0.90948 0.00443186 6 0.84941 0.76948 0.0799358 0.29223143 8.4662e-01 insignificant 1.00000 1.000000 insignificant 0.0836930 0.98826871 insignificant 1 1.00000 insignificant 0.0506733 0.201184 insignificant 1.000 insignificant 0.91457 0.7590698 0.161396 6 0.84941 0.7765855 0.0728285 4.3735e-13 9.9751e-01 weaklyHypermeth 9.7189e-12 1.0000e+00 weaklyHypermeth 1.0382e-03 9.9030e-01 weaklyHypermeth 1.7020e-02 1.0000e+00 weaklyHypermeth 0.1418193 2.1113e-03 weaklyHypermeth 6.2097e-02 weaklyHypermeth 0.91457 0.86011 5.0913e-02 6 0.84941 0.88827 -0.0388541 6.6871e-03 8.5462e-01 weaklyHypermeth 1.6310e-01 1.000000 insignificant 2.4559e-03 0.9557932 weaklyHypermeth 9.4458e-02 1.00000 weaklyHypermeth 0.0211198 3.5183e-01 insignificant 1.00000000 insignificant 0.90948 0.7590698 0.15626000 6 0.76948 0.7765855 -0.0071073 2.8407e-08 9.9992e-01 weaklyHypermeth 5.4629e-07 1.0000e+00 weaklyHypermeth 1.6605e-02 9.7358e-01 weaklyHypermeth 1.9768e-01 1.00000000 insignificant 0.091146 5.5713e-02 insignificant 7.2354e-01 insignificant 0.90948 0.86011 0.0444850 6 0.76948 0.88827 -0.1187899 4.7680e-02 9.4192e-01 weaklyHypermeth 8.3648e-01 1.000000 insignificant 1.6358e-01 0.77524970 insignificant 1.0000e+00 1.00000 insignificant -0.0295535 4.2071e-01 insignificant 1.000000 insignificant 0.7590698 0.86011 -0.1216609 6 0.7765855 0.88827 -0.111683 9.5576e-01 3.4423e-04 weaklyHypometh 1.0000e+00 6.0391e-03 weaklyHypometh 9.0802e-01 5.6176e-02 insignificant 1.0000e+00 6.8507e-01 insignificant -0.120700 6.5623e-03 weaklyHypometh 1.8229e-01 insignificant chr15 64072379 64073379 133101 RAB11A ENSG00000103769 0.81690 267 5 0.81856 235 5 0.76640 174 5 0.93048 91 5 0.83636 47 5 0.88596 247 5 0.84602 170 5 0.84314 150 5 0.81289 144 5 0.86766 150 5 0.79834 207 5 0.86340 88 5 0.81463 218 5 NA 0 0 0.80418 175 5 0.83750 56 5 0.87333 64 5 0.78346 124 5 0.84420 106 5 0.79344 247 5 0.87566 74 5 0.79004 86 5 0.86799 190 5 0.74790 70 5 0.83810 41 5 0.81288 205 5 0.84714 89 5 0.73084 47 5 0.85009 173 5 0.89854 279 5 0.92799 159 5 0.85920 291 5 0.3359190 208 5 0.6398294 164 5 1.0000000 9 0 0.516502 94 5 0.421046 66 5 0.343374 237 5 0.85254 227 5 0.83789 277 5 0.84974 104 5 0.76330 236 5 0.89978 100 5 0.81708 0.81844 0.76526 0.93197 0.84023 0.88545 0.84582 0.84384 0.81039 0.86821 0.79801 0.86131 0.815752 NA 0.80527 0.83564 0.87362 0.78191 0.84516 0.79367 0.87790 0.79221 0.86793 0.74212 0.84154 0.81474 0.85019 0.73637 0.85037 0.89934 0.92852 0.85969 0.3398481 0.64088951 0.79356132 0.5120532 0.428109 0.353508 0.853709 0.83752 0.850623 0.76318 0.90063 5 0.82804 0.85974 -0.03163080 5 0.82823 0.85813 -0.0299007 0.99477168 2.1808e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9231655 0.02861661 weaklyHypometh 1 1.00000 insignificant -0.0036798 0.849458 lowCoverage 1.000 lowCoverage 0.82804 0.4460154 0.381488 5 0.82823 0.4354357 0.3927959 2.0530e-28 1.0000e+00 hypermethylated 1.2077e-26 1.0000e+00 hypermethylated 3.6785e-07 1.0000e+00 hypermethylated 1.4148e-05 1.0000e+00 hypermethylated 0.2907396 3.6492e-02 lowCoverage 5.2887e-01 lowCoverage 0.82804 0.83369 4.2928e-05 5 0.82823 0.83066 -0.0024256 1.6528e-01 3.4526e-01 insignificant 1.0000e+00 1.000000 insignificant 4.7511e-01 0.2510487 insignificant 1.0000e+00 1.00000 insignificant -0.0071299 7.7591e-01 lowCoverage 1.00000000 lowCoverage 0.85974 0.4460154 0.41347515 5 0.85813 0.4354357 0.4226966 4.1790e-21 1.0000e+00 hypermethylated 2.4583e-19 1.0000e+00 hypermethylated 1.3381e-06 1.0000e+00 hypermethylated 5.5754e-05 1.00000000 hypermethylated 0.294419 3.4631e-02 lowCoverage 5.0928e-01 lowCoverage 0.85974 0.83369 0.0313816 5 0.85813 0.83066 0.0274751 1.3656e-01 8.7933e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1338e-01 0.73698355 insignificant 1.0000e+00 1.00000 insignificant -0.0034501 9.0369e-01 insignificant 1.000000 insignificant 0.4460154 0.83369 -0.3790484 5 0.4354357 0.83066 -0.395221 1.0000e+00 5.8594e-10 hypomethylated 1.0000e+00 3.4467e-08 hypomethylated 1.0000e+00 1.8907e-04 hypomethylated 1.0000e+00 7.1477e-03 hypomethylated -0.297869 3.3038e-02 lowCoverage 5.4160e-01 lowCoverage chr15 64221357 64222357 133124 RAB11A ENSG00000103769 0.89423 166 5 0.68309 175 4 0.87302 133 5 0.87156 147 5 0.89638 96 4 0.91762 326 5 0.93333 27 4 0.90933 109 5 0.84598 71 5 0.90476 96 5 0.85810 156 5 0.90000 19 0 0.96287 154 5 0.89333 66 5 0.92667 130 5 NA 0 0 0.50000 2 0 0.87307 171 4 0.94462 113 5 0.89345 191 5 0.76250 42 5 0.81956 122 5 0.95000 121 5 0.81008 84 5 0.91111 45 5 0.87803 142 5 0.86526 191 5 0.81667 50 4 0.73984 101 5 0.88387 143 5 0.95067 108 5 0.96570 171 5 0.4345208 207 5 0.7000000 78 5 0.3260753 242 4 0.406667 22 3 0.651111 89 5 0.710000 172 5 0.72452 66 5 0.87077 117 4 0.92308 57 5 0.80702 79 4 0.81969 108 5 0.89128 0.68401 0.87087 0.91953 0.87887 0.93727 0.97362 0.92052 0.84589 0.89072 0.90062 0.96043 0.956677 0.87626 0.94532 NA NA 0.85179 0.94643 0.89448 0.91888 0.81141 0.94065 0.84424 0.93046 0.90059 0.88735 0.97626 0.72878 0.89937 0.94471 0.95189 0.4421036 0.77657874 0.44253887 0.4695444 0.654436 0.700360 0.711845 0.90209 0.908688 0.82519 0.85177 4 0.89012 0.88982 -0.00220519 5 0.88116 0.88267 -0.0015116 0.71432453 7.0035e-01 insignificant 1.00000 1.000000 insignificant 0.7377856 0.63422962 insignificant 1 1.00000 insignificant 0.0046696 0.886555 lowCoverage 1.000 lowCoverage 0.89012 0.5661310 0.325481 5 0.88116 0.5564528 0.3247071 4.4431e-20 1.0000e+00 hypermethylated 1.7772e-18 1.0000e+00 hypermethylated 7.0314e-08 1.0000e+00 hypermethylated 2.8126e-06 1.0000e+00 hypermethylated 0.3293798 3.5473e-03 lowCoverage 9.3350e-02 lowCoverage 0.89012 0.85480 3.7773e-02 4 0.88116 0.84001 0.0411479 1.0735e-01 9.5478e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.0617e-02 0.9812912 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0384257 3.7539e-01 lowCoverage 1.00000000 lowCoverage 0.88864 0.5654321 0.32772821 5 0.81889 0.4637107 0.3551823 2.7786e-14 9.9999e-01 hypermethylated 1.0687e-12 1.0000e+00 hypermethylated 6.3309e-07 1.0000e+00 hypermethylated 2.7526e-05 1.00000000 hypermethylated 0.324710 4.0495e-03 lowCoverage 9.8909e-02 lowCoverage 0.88982 0.85480 0.0400575 4 0.88267 0.84001 0.0426596 1.3592e-01 9.5527e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.0082e-02 0.99505537 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0337560 4.1975e-01 lowCoverage 1.000000 lowCoverage 0.5661310 0.85480 -0.2834023 4 0.5564528 0.84001 -0.283559 9.9997e-01 1.8664e-06 lowCoverage 1.0000e+00 5.4893e-05 lowCoverage 9.9997e-01 2.3921e-04 lowCoverage 1.0000e+00 7.7166e-03 lowCoverage -0.290954 6.3769e-03 lowCoverage 1.8220e-01 lowCoverage chr15 64710163 64711163 133150 LCTL ENSG00000188501 0.75247 287 8 0.80006 175 8 0.57879 234 8 0.73717 174 7 0.63343 98 7 0.81154 307 8 0.62505 107 8 0.64485 197 8 0.49389 128 7 0.79839 172 7 0.83319 246 8 0.40032 119 8 0.74578 258 8 0.66493 126 5 0.67949 246 8 0.47619 23 3 0.20132 38 4 0.52623 252 8 0.84448 214 8 0.80367 206 8 0.74967 75 6 0.19436 149 7 0.79964 140 7 0.77553 130 7 0.73409 98 8 0.79837 317 8 0.51454 117 6 0.86786 32 4 0.72788 156 7 0.71972 313 8 0.78456 241 7 0.62483 234 7 0.7063958 179 7 0.8225829 153 8 0.9480519 351 7 0.903175 54 6 0.905382 97 8 0.899370 227 7 0.27301 226 8 0.20091 279 8 0.20017 260 8 0.14205 261 7 0.51064 167 8 0.75091 0.76959 0.51285 0.71511 0.55365 0.79103 0.58281 0.63435 0.57075 0.80421 0.82918 0.35716 0.735731 0.67120 0.65805 0.53461 0.25389 0.48649 0.82645 0.78411 0.72840 0.17087 0.78889 0.83382 0.70986 0.78771 0.57265 0.82068 0.69918 0.69076 0.78281 0.81275 0.7813330 0.79557975 0.94951299 0.9095569 0.892733 0.904500 0.228038 0.17509 0.168754 0.10201 0.45966 5 0.68423 0.71229 -0.02766536 8 0.75434 0.56829 0.1860506 0.96291405 5.7892e-01 insignificant 1.00000 1.000000 insignificant 0.9812906 0.15547059 insignificant 1 1.00000 insignificant -0.0383595 0.556809 insignificant 1.000 insignificant 0.68405 0.8774741 -0.200740 8 0.69292 0.8917598 -0.1988378 1.0000e+00 5.3865e-13 hypomethylated 1.0000e+00 5.3865e-10 hypomethylated 1.0000e+00 1.7794e-11 hypomethylated 1.0000e+00 1.7794e-08 hypomethylated -0.2115975 7.7998e-04 hypomethylated 2.5161e-02 hypomethylated 0.68405 0.24560 4.6591e-01 8 0.69292 0.24053 0.4523948 4.5609e-34 1.0000e+00 hypermethylated 4.5609e-31 1.000000 hypermethylated 5.2395e-14 1.0000000 hypermethylated 2.6198e-11 1.00000 hypermethylated 0.3872082 1.3069e-03 weaklyHypermeth 0.12029576 insignificant 0.71300 0.8774741 -0.16827668 8 0.71036 0.8917598 -0.1814011 9.9209e-01 7.1715e-08 weaklyHypometh 1.0000e+00 7.1715e-05 weaklyHypometh 9.9854e-01 4.9048e-07 weaklyHypometh 1.0000e+00 0.00049048 weaklyHypometh -0.173238 1.4547e-02 weaklyHypometh 2.6450e-01 insignificant 0.71300 0.24560 0.4890264 8 0.71036 0.24053 0.4698315 7.1067e-22 1.0000e+00 hypermethylated 7.1067e-19 1.000000 hypermethylated 1.9099e-11 1.00000000 hypermethylated 1.9099e-08 1.00000 hypermethylated 0.4255678 5.4235e-04 hypermethylated 0.096342 hypermethylated 0.8774741 0.24560 0.6639080 8 0.8917598 0.24053 0.651233 4.8998e-32 1.0000e+00 hypermethylated 4.8998e-29 1.0000e+00 hypermethylated 6.9533e-11 1.0000e+00 hypermethylated 6.9533e-08 1.0000e+00 hypermethylated 0.598806 1.4406e-04 hypermethylated 1.8007e-02 hypermethylated chr15 64726387 64727387 133152 LCTL ENSG00000188501 0.82808 264 6 0.81616 96 6 0.80000 11 0 0.80587 185 6 0.80655 39 3 0.90286 102 6 0.75000 36 3 0.88889 7 0 0.76481 27 2 0.82619 37 5 0.95238 40 6 0.66667 9 0 0.64742 93 6 0.80476 46 6 0.86188 106 6 NA 0 0 NA 0 0 0.66746 158 6 1.00000 1 0 0.77258 57 6 0.00000 1 0 0.80000 9 0 0.66667 8 0 0.78125 17 0 0.98413 25 2 0.73957 178 6 0.37500 6 0 0.25000 4 0 0.75000 9 0 0.66667 4 0 1.00000 2 0 0.75000 4 0 1.0000000 2 0 0.5077160 129 6 0.6570128 493 8 0.642857 14 2 0.388889 14 0 1.000000 4 0 0.71905 182 6 0.84089 251 6 NA 0 0 0.77367 97 6 0.70452 59 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.81887 0.81298 0.00973349 0 0.73398 0.69422 0.0397645 0.59630963 5.6711e-01 noCoverage 1.00000 1.000000 noCoverage 0.8141534 0.21550657 noCoverage 1 1.00000 noCoverage 0.1620925 0.089702 lowCoverage 1.000 lowCoverage 0.81887 0.5550459 0.170980 6 0.73398 0.5612167 0.1727682 1.6704e-05 7.8599e-01 weaklyHypermeth 2.1416e-04 1.0000e+00 weaklyHypermeth 1.7971e-02 9.7321e-01 weaklyHypermeth 2.1142e-01 1.0000e+00 insignificant 0.1096198 3.4227e-01 lowCoverage 1.0000e+00 lowCoverage 0.82034 0.78571 3.3243e-02 6 0.78598 0.74561 0.0403757 3.6392e-01 4.8007e-01 insignificant 1.0000e+00 1.000000 insignificant 2.4395e-01 0.8319663 insignificant 1.0000e+00 1.00000 insignificant 0.0495012 2.3674e-01 lowCoverage 1.00000000 lowCoverage 0.80150 0.5533537 0.20719857 0 0.65304 0.5144486 0.1385867 5.7305e-03 9.9916e-01 noCoverage 5.9077e-02 1.0000e+00 noCoverage 3.8307e-01 9.9546e-01 noCoverage 1.0000e+00 1.00000000 noCoverage -0.052473 7.0201e-01 lowCoverage 1.0000e+00 lowCoverage 0.80377 0.78608 0.0081293 0 0.68364 0.77105 -0.0874028 8.1726e-01 7.7903e-01 noCoverage 1.0000e+00 1.000000 noCoverage 3.8002e-01 0.93594192 noCoverage 1.0000e+00 1.00000 noCoverage -0.1125914 2.3619e-01 lowCoverage 1.000000 lowCoverage 0.5550459 0.78608 -0.1842948 6 0.6173384 0.77105 -0.153707 9.8981e-01 1.6568e-02 weaklyHypometh 1.0000e+00 1.9724e-01 insignificant 9.7920e-01 2.1676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.060119 5.9716e-01 lowCoverage 1.0000e+00 lowCoverage chr15 64786137 64787137 133155 SMAD6 ENSG00000137834 0.40716 430 10 0.39655 410 12 0.28980 259 12 0.36913 420 10 0.29599 209 12 0.39880 593 11 0.34826 316 12 0.34969 248 12 0.34569 299 12 0.38891 201 12 0.40949 391 12 0.33207 148 9 0.34782 198 10 0.13893 126 8 0.37548 237 12 0.40088 156 10 0.46890 81 5 0.34670 735 10 0.35482 282 10 0.44411 546 11 0.31605 142 11 0.45021 166 7 0.30185 367 12 0.46798 134 8 0.35163 534 11 0.36823 408 12 0.32680 363 12 0.33716 226 12 0.31836 275 11 0.37828 464 12 0.37304 522 12 0.41508 406 12 0.1250389 365 12 0.1268149 281 11 0.1870795 396 10 0.311574 96 8 0.277321 278 12 0.242316 454 12 0.34602 401 11 0.29673 499 11 0.34970 427 11 0.33307 591 10 0.26727 493 11 0.46096 0.42088 0.38137 0.46804 0.38163 0.49791 0.44110 0.43322 0.41943 0.47687 0.47652 0.41308 0.450851 0.40701 0.44993 0.46463 0.48019 0.40311 0.44391 0.44786 0.41615 0.46159 0.41671 0.48856 0.46911 0.42219 0.40355 0.42438 0.37901 0.44455 0.46282 0.50158 0.1466498 0.14611018 0.21801833 0.2646610 0.329629 0.280988 0.421257 0.33973 0.420512 0.34460 0.33742 8 0.43778 0.41298 -0.01031478 12 0.35842 0.38353 -0.0251092 0.43294012 3.8778e-01 insignificant 1.00000 1.000000 insignificant 0.5668890 0.90859613 insignificant 1 1.00000 insignificant -0.0065971 0.763795 insignificant 1.000 insignificant 0.43774 0.1820128 0.262697 12 0.36260 0.1848401 0.1777626 1.4150e-19 1.0000e+00 hypermethylated 5.4424e-18 1.0000e+00 hypermethylated 6.5748e-11 1.0000e+00 hypermethylated 5.0575e-09 1.0000e+00 hypermethylated 0.1487674 3.4843e-03 weaklyHypermeth 9.3350e-02 weaklyHypermeth 0.43767 0.42306 8.7651e-02 11 0.33471 0.31203 0.0226773 6.4017e-06 1.0000e+00 weaklyHypermeth 3.5565e-04 1.000000 weaklyHypermeth 1.7583e-04 0.9999967 weaklyHypermeth 1.1799e-02 1.00000 weaklyHypermeth 0.0419007 8.0408e-02 insignificant 1.00000000 insignificant 0.41294 0.1823529 0.27116370 12 0.33611 0.2090831 0.1270266 1.8679e-16 1.0000e+00 hypermethylated 8.8946e-15 1.0000e+00 hypermethylated 7.3055e-08 9.9997e-01 hypermethylated 3.6527e-06 1.00000000 hypermethylated 0.155365 2.7904e-03 weaklyHypermeth 7.5417e-02 weaklyHypermeth 0.41284 0.42306 0.0988056 11 0.33611 0.31203 0.0240769 4.9578e-06 1.0000e+00 weaklyHypermeth 2.3609e-04 1.000000 weaklyHypermeth 4.9473e-04 0.99964086 weaklyHypermeth 2.9102e-02 1.00000 weaklyHypermeth 0.0484978 5.0187e-02 insignificant 1.000000 insignificant 0.1820128 0.42300 -0.1896311 11 0.1848401 0.29637 -0.111529 9.9852e-01 1.0528e-03 weaklyHypometh 1.0000e+00 1.6196e-02 weaklyHypometh 9.9978e-01 1.4932e-02 weaklyHypometh 1.0000e+00 2.4479e-01 insignificant -0.106867 1.9237e-02 weaklyHypometh 3.5625e-01 insignificant chr15 64808271 64809271 133160 SMAD6 ENSG00000137834 0.54516 125 6 0.43656 229 6 0.42626 119 5 0.44967 131 6 0.38599 104 5 0.74243 186 8 0.35824 113 4 0.52779 140 6 0.43846 85 4 0.61146 88 4 0.68259 273 8 0.54690 64 3 0.36213 121 5 0.48438 85 4 0.42394 125 4 0.50952 70 4 0.49569 117 1 0.28228 105 5 0.46349 128 5 0.51327 144 7 0.29630 33 3 0.17410 67 3 0.60595 58 5 0.36470 69 4 0.62336 110 5 0.53008 234 6 0.44852 139 7 0.24185 93 4 0.59255 193 6 0.52632 349 7 0.42826 217 6 0.53431 174 7 0.0100601 123 5 0.0158730 79 4 0.0000000 179 5 0.000000 41 2 0.044481 319 8 0.017272 257 7 0.35697 134 6 0.19216 76 5 0.21637 72 6 0.24899 52 6 0.39195 112 6 0.53817 0.37245 0.51898 0.50703 0.49270 0.69626 0.38075 0.64166 0.38916 0.52434 0.65739 0.44020 0.355406 0.50478 0.47132 0.45038 NA 0.26866 0.56725 0.55413 0.33757 0.18069 0.77644 0.39137 0.65481 0.68127 0.55210 0.37939 0.67332 0.54586 0.51306 0.57303 0.0212846 0.00072701 0.00014540 0.0000000 0.015097 0.022689 0.315428 0.19201 0.203269 0.15015 0.25571 3 0.54214 0.58939 -0.02411360 6 0.56128 0.41457 0.1467107 0.49955665 9.2731e-01 insignificant 1.00000 1.000000 insignificant 0.6901048 0.97586335 insignificant 1 1.00000 insignificant 0.0371202 0.463178 insignificant 1.000 insignificant 0.54223 0.0200401 0.520127 6 0.49753 0.0402125 0.4573170 2.4377e-30 1.0000e+00 hypermethylated 1.7412e-28 1.0000e+00 hypermethylated 3.1775e-14 1.0000e+00 hypermethylated 5.2958e-12 1.0000e+00 hypermethylated 0.4696974 1.0779e-14 hypermethylated 1.5399e-12 hypermethylated 0.54286 0.28251 2.3598e-01 6 0.51285 0.36399 0.1488628 2.6331e-08 9.9333e-01 hypermethylated 2.3937e-06 1.000000 hypermethylated 2.9934e-06 0.9954606 hypermethylated 5.9869e-04 1.00000 hypermethylated 0.2030256 2.8347e-03 weaklyHypermeth 0.18897761 insignificant 0.59017 0.0200401 0.55606912 6 0.47442 0.0402125 0.4342051 2.6102e-26 1.0000e+00 hypermethylated 2.0079e-24 1.0000e+00 hypermethylated 6.4045e-10 1.0000e+00 hypermethylated 4.9265e-08 1.00000000 hypermethylated 0.432577 5.4338e-07 hypermethylated 3.8504e-05 hypermethylated 0.59028 0.28251 0.2724379 6 0.46873 0.36399 0.1047419 1.0944e-08 9.8926e-01 hypermethylated 1.2160e-06 1.000000 hypermethylated 9.7321e-05 0.99657842 hypermethylated 8.8473e-03 1.00000 hypermethylated 0.1659054 1.4237e-02 weaklyHypermeth 0.749299 insignificant 0.0200803 0.28251 -0.2658859 6 0.0491486 0.36399 -0.314842 1.0000e+00 3.0060e-13 hypomethylated 1.0000e+00 2.5050e-11 hypomethylated 1.0000e+00 2.0380e-08 hypomethylated 1.0000e+00 5.0950e-06 hypomethylated -0.266672 2.1586e-03 weaklyHypometh 7.7094e-02 weaklyHypometh chr15 65200137 65201137 133194 SMAD3 ENSG00000166949 0.74607 399 9 0.63895 247 12 0.48264 247 9 0.80283 390 9 0.72605 136 11 0.61749 423 9 0.78487 204 9 0.75715 207 9 0.65810 216 9 0.63780 137 9 0.81875 254 11 0.56985 122 9 0.63210 316 11 0.73016 107 11 0.62874 213 9 0.89361 105 7 0.54437 43 3 0.47704 522 10 0.80109 130 9 0.76291 380 9 0.80628 90 10 0.54723 214 9 0.69383 201 12 0.67491 138 9 0.69551 152 11 0.67797 243 11 0.58805 185 12 0.68037 78 7 0.66120 154 9 0.71372 286 11 0.78226 213 11 0.65414 396 9 0.0425668 224 11 0.0194805 175 11 0.1666667 90 2 0.095238 108 9 0.086569 309 12 0.038069 288 11 0.64235 382 7 0.67885 346 11 0.67833 310 9 0.37634 335 9 0.41169 470 9 0.81749 0.69675 0.60305 0.83647 0.81017 0.85235 0.81397 0.72556 0.71027 0.68365 0.81758 0.69695 0.735236 0.76024 0.68177 0.87764 0.74699 0.42244 0.80752 0.77366 0.83659 0.56151 0.74997 0.77762 0.69544 0.76918 0.65413 0.83476 0.66729 0.76423 0.76778 0.82740 0.0465271 0.02845920 0.01489832 0.0059209 0.044006 0.018498 0.708987 0.63004 0.718972 0.44876 0.62046 7 0.74475 0.74723 -0.01660956 9 0.62464 0.61964 0.0049954 0.91054806 5.1138e-01 insignificant 1.00000 1.000000 insignificant 0.8068414 0.86215952 insignificant 1 1.00000 insignificant 0.0042409 0.897994 insignificant 1.000 insignificant 0.74498 0.0402010 0.704908 9 0.61904 0.1054979 0.5135390 7.1071e-74 1.0000e+00 hypermethylated 7.1071e-71 1.0000e+00 hypermethylated 1.9349e-22 1.0000e+00 hypermethylated 1.9349e-19 1.0000e+00 hypermethylated 0.6107631 2.4334e-13 hypermethylated 2.4334e-11 hypermethylated 0.74400 0.65925 1.0578e-01 9 0.68243 0.60815 0.0742893 1.1673e-03 9.9958e-01 weaklyHypermeth 3.3351e-02 1.000000 weaklyHypermeth 6.1450e-04 0.9999640 weaklyHypermeth 2.9262e-02 1.00000 weaklyHypermeth 0.1280163 1.3316e-01 insignificant 1.00000000 insignificant 0.74766 0.0402010 0.71790133 9 0.62712 0.1054979 0.5216242 2.0214e-72 1.0000e+00 hypermethylated 2.0214e-69 1.0000e+00 hypermethylated 3.5338e-20 1.0000e+00 hypermethylated 3.5338e-17 1.00000000 hypermethylated 0.606522 3.3347e-11 hypermethylated 5.5579e-09 hypermethylated 0.74851 0.65978 0.1266552 9 0.69885 0.62778 0.0710789 1.6029e-04 9.9970e-01 weaklyHypermeth 5.9367e-03 1.000000 weaklyHypermeth 2.9311e-03 0.99968730 weaklyHypermeth 1.1725e-01 1.00000 insignificant 0.1237753 1.4177e-01 insignificant 1.000000 insignificant 0.0387532 0.65977 -0.5936573 9 0.0721513 0.62478 -0.552632 1.0000e+00 9.3706e-35 hypomethylated 1.0000e+00 9.3706e-32 hypomethylated 1.0000e+00 4.8597e-12 hypomethylated 1.0000e+00 4.8597e-09 hypomethylated -0.482747 1.1647e-03 weaklyHypometh 6.1299e-02 weaklyHypometh chr15 66693746 66694746 133357 CORO2B ENSG00000103647 0.35514 565 9 0.33220 465 9 0.42805 245 8 0.38217 447 9 0.29174 171 8 0.48975 446 9 0.38982 319 8 0.44465 256 8 0.12887 266 7 0.27973 177 5 0.38580 377 9 0.40674 161 5 0.11904 188 7 0.39208 77 6 0.29510 246 7 0.21236 127 7 0.30738 193 4 0.25272 659 8 0.28718 226 8 0.24414 419 9 0.36035 98 5 0.14124 122 5 0.30617 273 8 0.36573 106 6 0.25811 247 8 0.29165 436 9 0.34712 254 8 0.30870 67 5 0.31056 308 9 0.23227 496 9 0.33171 469 9 0.40107 454 9 0.2420022 308 9 0.4387774 211 8 0.4342371 341 5 0.389538 100 5 0.400281 209 9 0.350087 519 9 0.11041 637 9 0.30135 488 9 0.19618 441 8 0.24238 510 7 0.28491 471 9 0.26601 0.21816 0.32643 0.15713 0.25171 0.37999 0.21194 0.22233 0.21620 0.27234 0.35747 0.28445 0.072885 0.35095 0.17615 0.24855 0.10793 0.21836 0.20132 0.17355 0.45019 0.11281 0.27748 0.24285 0.25600 0.16468 0.26846 0.27559 0.16030 0.17485 0.25484 0.28444 0.0781428 0.27077173 0.70911161 0.2019664 0.419670 0.153519 0.050099 0.19194 0.079462 0.10289 0.13011 4 0.26493 0.27147 0.00965533 9 0.27960 0.27182 0.0077815 0.19163674 9.4798e-01 insignificant 1.00000 1.000000 insignificant 0.4390149 0.94691280 insignificant 1 1.00000 insignificant 0.0166743 0.580817 insignificant 1.000 insignificant 0.26506 0.3572275 -0.077932 9 0.30290 0.3371210 -0.0342173 5.5753e-03 1.0854e-07 weaklyHypometh 5.8076e-02 5.4271e-05 weaklyHypometh 4.2209e-01 1.1089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0545888 1.6956e-01 insignificant 1.0000e+00 insignificant 0.26541 0.11818 1.3074e-01 9 0.33044 0.21986 0.1105852 1.4432e-10 9.9862e-01 weaklyHypermeth 2.0616e-08 1.000000 weaklyHypermeth 5.2668e-06 0.9952554 weaklyHypermeth 8.7781e-04 1.00000 weaklyHypermeth 0.0941866 5.1393e-02 insignificant 1.00000000 insignificant 0.27180 0.3572275 -0.08356184 9 0.29447 0.3371210 -0.0426473 6.8044e-02 3.0959e-06 weaklyHypometh 5.7664e-01 1.5479e-03 weaklyHypometh 6.9647e-01 1.3513e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.071263 7.6694e-02 insignificant 9.2403e-01 insignificant 0.27163 0.11818 0.1279643 9 0.32124 0.21986 0.1013889 5.5347e-07 9.7178e-01 weaklyHypermeth 4.2575e-05 1.000000 weaklyHypermeth 3.8449e-04 0.91328257 weaklyHypermeth 2.4453e-02 1.00000 weaklyHypermeth 0.0775123 9.3215e-02 insignificant 1.000000 insignificant 0.3576512 0.11797 0.1988698 9 0.4045452 0.21684 0.187704 1.0140e-05 9.6469e-01 weaklyHypermeth 5.0698e-03 1.0000e+00 weaklyHypermeth 4.7914e-03 9.4691e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.148775 1.0580e-02 weaklyHypermeth 2.2042e-01 insignificant chr15 67610259 67611259 133387 ENSG00000207119 0.51373 351 11 0.33946 342 11 0.52630 281 11 0.46653 222 9 0.47985 173 8 0.50656 396 11 0.56304 311 11 0.42452 279 11 0.45900 235 9 0.43738 209 11 0.56967 403 11 0.40384 187 9 0.26618 364 9 0.60307 37 4 0.49837 246 11 0.60731 132 8 0.48088 162 9 0.42844 287 10 0.55904 265 11 0.25516 460 11 0.29216 114 8 0.17390 121 7 0.53101 314 11 0.35651 98 6 0.41049 54 2 0.38991 471 11 0.41974 189 10 0.41810 81 6 0.51017 240 11 0.30179 477 11 0.29521 604 11 0.54675 476 11 0.3057826 310 11 0.2585116 267 11 0.7445055 53 4 0.299152 86 4 0.711063 179 10 0.159508 364 11 0.17093 677 10 0.23000 454 11 0.13787 321 11 0.28092 394 10 0.17708 387 11 0.54510 0.38995 0.55676 0.45571 0.46804 0.57246 0.59624 0.48693 0.48196 0.51981 0.59037 0.47895 0.255071 0.54818 0.47406 0.66252 0.44613 0.47402 0.59465 0.29389 0.38845 0.18951 0.55909 0.36348 0.50371 0.42689 0.44144 0.37279 0.55297 0.34735 0.34491 0.61545 0.3025097 0.26175980 0.58181577 0.2203105 0.709039 0.193330 0.169211 0.24167 0.175006 0.24872 0.22735 4 0.46396 0.42390 0.04092691 11 0.41560 0.45568 -0.0400801 0.04461964 9.9916e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.0028594 0.99672608 weaklyHypermeth 1 1.00000 insignificant 0.0822702 0.046186 weaklyHypermeth 1.000 insignificant 0.46431 0.3264496 0.144989 11 0.45338 0.3276134 0.1257687 1.4174e-05 9.9896e-01 weaklyHypermeth 1.8407e-04 1.0000e+00 weaklyHypermeth 1.8858e-02 9.9652e-01 weaklyHypermeth 2.1928e-01 1.0000e+00 insignificant 0.0563289 6.1014e-01 insignificant 1.0000e+00 insignificant 0.46431 0.18003 2.8677e-01 11 0.45338 0.19066 0.2627179 5.8555e-24 1.0000e+00 hypermethylated 2.9278e-21 1.000000 hypermethylated 7.3788e-18 1.0000000 hypermethylated 7.3788e-15 1.00000 hypermethylated 0.2700559 5.6439e-06 hypermethylated 0.00282195 hypermethylated 0.42372 0.3264496 0.10466558 11 0.40620 0.3276134 0.0785834 1.7103e-02 9.8161e-01 weaklyHypermeth 1.6768e-01 1.0000e+00 insignificant 2.6257e-01 8.5436e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.025941 8.1612e-01 insignificant 1.0000e+00 insignificant 0.42372 0.18003 0.2424307 11 0.40620 0.19066 0.2155326 8.4288e-14 1.0000e+00 hypermethylated 4.2144e-11 1.000000 hypermethylated 1.3056e-08 1.00000000 hypermethylated 6.5282e-06 1.00000 hypermethylated 0.1877858 3.9950e-04 weaklyHypermeth 0.096342 weaklyHypermeth 0.3264496 0.18003 0.1340153 11 0.3276134 0.19066 0.136949 5.8691e-03 9.9978e-01 weaklyHypermeth 9.7818e-01 1.0000e+00 insignificant 3.2188e-02 9.9965e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.213727 9.1176e-02 insignificant 1.0000e+00 insignificant chr15 67665599 67666599 133391 ENSG00000207119 0.86084 143 5 0.81251 117 5 0.81439 74 5 0.92393 150 5 0.88662 51 2 0.93794 227 5 0.91520 44 2 0.92847 145 5 0.95128 29 3 0.98947 47 3 0.92962 202 7 0.58333 9 0 0.97569 88 3 0.93778 71 5 0.92108 77 3 0.00000 4 0 0.00000 2 0 0.91202 327 5 0.96426 232 5 0.89497 136 5 0.97222 37 3 0.77574 41 3 0.70762 74 5 0.92705 58 3 0.93663 72 5 0.95407 170 5 0.84028 80 4 0.69907 36 3 0.92378 233 5 0.94863 180 7 0.94310 143 5 0.89658 163 5 0.6257305 91 5 0.7854167 103 5 0.8558824 210 4 0.913420 72 2 0.829082 135 5 0.969634 237 5 0.88472 100 5 0.94616 171 5 0.94445 125 5 0.92970 104 5 0.90984 105 5 0.84243 0.82210 0.75220 0.94203 0.79383 0.90113 0.83273 0.87154 0.93364 0.98091 0.88861 0.48937 0.957970 0.93895 0.89033 0.16749 NA 0.96432 0.96244 0.94457 0.95861 0.89589 0.88598 0.93992 0.94153 0.91548 0.81998 0.65659 0.86048 0.90543 0.92134 0.90029 0.7190622 0.79407051 0.73888000 0.9667000 0.714744 0.953260 0.888813 0.93734 0.930238 0.93868 0.91038 2 0.88782 0.89122 -0.00032223 5 0.79752 0.87156 -0.0740450 0.93019918 3.2896e-01 insignificant 1.00000 1.000000 insignificant 0.9608365 0.67644723 insignificant 1 1.00000 insignificant -0.0700936 0.330037 lowCoverage 1.000 lowCoverage 0.88782 0.8160377 0.062568 5 0.79752 0.8600680 -0.0625482 7.1316e-03 5.8704e-01 weaklyHypermeth 7.2771e-02 1.0000e+00 weaklyHypermeth 3.0584e-01 6.4434e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0228897 7.8002e-01 lowCoverage 1.0000e+00 lowCoverage 0.88863 0.91901 -3.6191e-02 5 0.91145 0.94364 -0.0321843 9.9913e-01 1.4313e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6331e-01 0.7346552 insignificant 1.0000e+00 1.00000 insignificant -0.1160044 9.2703e-02 lowCoverage 1.00000000 lowCoverage 0.89122 0.8160377 0.07279577 5 0.87156 0.8600680 0.0114968 2.4184e-02 3.8449e-01 weaklyHypermeth 2.3032e-01 1.0000e+00 insignificant 3.1262e-01 6.4897e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.047204 4.2388e-01 lowCoverage 1.0000e+00 lowCoverage 0.89183 0.91901 -0.0334103 5 0.92465 0.94364 -0.0189900 9.9783e-01 2.9080e-01 insignificant 1.0000e+00 1.000000 insignificant 8.2996e-01 0.80719066 insignificant 1.0000e+00 1.00000 insignificant -0.0459108 1.5456e-01 lowCoverage 1.000000 lowCoverage 0.8158205 0.91901 -0.0981279 5 0.8400777 0.94364 -0.103558 8.9031e-01 1.0536e-01 insignificant 1.0000e+00 9.4075e-01 insignificant 9.0255e-01 6.3338e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.093115 1.1545e-01 lowCoverage 1.0000e+00 lowCoverage chr15 67743688 67744688 133399 ENSG00000207119 0.87553 390 5 0.80045 191 5 0.81762 138 5 0.93352 396 5 0.97778 52 5 0.89036 385 5 0.86931 63 5 0.90152 117 5 0.64405 124 5 0.63713 136 5 0.90102 196 7 0.87778 24 2 0.98565 173 5 0.93690 57 2 0.94747 119 5 0.80357 30 2 0.46875 25 3 0.81784 670 5 0.96646 195 5 0.89899 311 5 0.81297 66 5 0.83877 159 5 0.76441 170 5 0.76852 84 5 0.96096 201 5 0.66316 269 5 0.80305 116 5 0.69954 48 5 0.88488 170 5 0.97230 283 5 0.96831 270 5 0.95915 303 5 0.6335580 256 5 0.7215173 180 5 0.6000000 39 2 0.659211 41 2 0.672584 91 5 0.613291 283 5 0.49951 368 5 0.66809 341 5 0.86451 462 5 0.74224 450 5 0.74563 372 5 0.88713 0.61522 0.69576 0.91376 0.98810 0.92288 0.73970 0.84249 0.89897 0.89610 0.90995 0.75918 0.985992 0.87978 0.93412 0.67645 0.44507 0.80699 0.96277 0.88899 0.84111 0.79512 0.90188 0.96684 0.92392 0.90664 0.84295 0.86562 0.86030 0.93686 0.92067 0.92155 0.7827748 0.82280559 0.78061224 0.5470260 0.736397 0.570168 0.477658 0.65306 0.807325 0.69019 0.60885 2 0.86969 0.90603 -0.03550426 5 0.88635 0.81945 0.0669073 0.87663121 5.9420e-02 insignificant 1.00000 1.000000 insignificant 0.8984042 0.47402023 insignificant 1 1.00000 insignificant 0.0062504 0.884781 lowCoverage 1.000 lowCoverage 0.86969 0.6741573 0.196151 5 0.88635 0.6510925 0.2352609 2.3432e-13 9.9901e-01 weaklyHypermeth 5.4492e-12 1.0000e+00 weaklyHypermeth 9.1733e-04 9.8199e-01 weaklyHypermeth 1.5289e-02 1.0000e+00 weaklyHypermeth 0.1975585 6.9315e-06 lowCoverage 3.6482e-04 lowCoverage 0.86990 0.66282 1.9778e-01 5 0.89421 0.74872 0.1454908 8.7595e-09 9.9985e-01 weaklyHypermeth 8.7595e-07 1.000000 weaklyHypermeth 1.1475e-04 0.9996604 weaklyHypermeth 8.8268e-03 1.00000 weaklyHypermeth 0.1435892 7.4637e-02 lowCoverage 1.00000000 lowCoverage 0.90603 0.6741573 0.23146440 5 0.81945 0.6510925 0.1683536 3.1174e-14 9.9000e-01 hypermethylated 1.1134e-12 1.0000e+00 hypermethylated 1.7664e-03 9.9163e-01 weaklyHypermeth 2.8491e-02 1.00000000 weaklyHypermeth 0.191308 7.5988e-05 lowCoverage 3.1662e-03 lowCoverage 0.90709 0.66282 0.2290493 5 0.84375 0.74872 0.0950363 4.6367e-12 9.8757e-01 hypermethylated 1.1592e-09 1.000000 hypermethylated 4.7440e-06 0.99563595 hypermethylated 8.9032e-04 1.00000 hypermethylated 0.1373388 8.6515e-02 insignificant 1.000000 insignificant 0.6738149 0.66282 -0.0040011 5 0.6387290 0.74872 -0.109986 5.9198e-01 5.4043e-02 insignificant 1.0000e+00 5.6295e-01 insignificant 5.6774e-01 3.7477e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.053969 4.3082e-01 lowCoverage 1.0000e+00 lowCoverage chr15 68070202 68071202 133429 ENSG00000215958 0.64502 277 4 0.66208 183 4 0.80063 125 5 0.65811 242 4 0.67235 87 5 0.72516 286 4 0.67311 128 4 0.71784 225 5 0.67750 189 5 0.65366 142 5 0.76252 205 5 0.63333 126 5 0.72613 228 4 0.66646 123 5 0.64281 257 4 0.65634 115 5 0.32987 77 5 0.59177 407 4 0.53633 153 4 0.55207 185 5 0.79429 78 4 0.36759 180 4 0.65582 131 5 0.61598 115 5 0.70189 102 5 0.80934 285 5 0.78265 123 5 0.84537 117 4 0.65896 293 5 0.84381 358 5 0.80047 327 5 0.79251 211 4 0.7485487 264 5 0.7608493 184 4 0.7555556 78 1 0.301136 56 4 0.671422 160 5 0.351056 320 5 0.20842 389 4 0.58047 192 4 0.30957 299 4 0.47456 229 4 0.46331 224 4 0.63219 0.71346 0.79383 0.55110 0.65465 0.63794 0.81200 0.71918 0.74207 0.68267 0.71437 0.72021 0.738681 0.65277 0.60741 0.84642 0.39768 0.55970 0.46748 0.47349 0.77341 0.32697 0.67791 0.56125 0.72733 0.73452 0.84203 0.81720 0.67750 0.81890 0.74962 0.81296 0.7691191 0.81805922 0.90002652 0.3071057 0.700254 0.321354 0.234710 0.45447 0.273013 0.46232 0.40379 4 0.63883 0.71422 -0.07766975 4 0.64127 0.72979 -0.0885234 0.99995388 1.0525e-03 lowCoverage 1.00000 0.526239 lowCoverage 0.9994589 0.00206044 lowCoverage 1 1.00000 lowCoverage -0.0732355 0.120706 lowCoverage 1.000 lowCoverage 0.63883 0.5969868 0.024521 4 0.64127 0.5954768 0.0457929 2.2822e-01 5.4747e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0546e-01 2.7403e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0510600 5.9225e-01 lowCoverage 1.0000e+00 lowCoverage 0.63883 0.31658 2.9972e-01 4 0.64127 0.36119 0.2800821 2.4613e-14 1.0000e+00 lowCoverage 6.1531e-12 1.000000 lowCoverage 1.6922e-08 0.9999480 lowCoverage 5.6408e-06 1.00000 lowCoverage 0.2418886 1.8024e-02 lowCoverage 0.64371607 lowCoverage 0.71422 0.5969868 0.10439945 5 0.72979 0.5954768 0.1343163 2.6605e-03 9.8441e-01 weaklyHypermeth 2.9236e-02 1.0000e+00 weaklyHypermeth 5.2662e-02 7.8422e-01 insignificant 5.5941e-01 1.00000000 insignificant 0.124296 2.3460e-01 lowCoverage 1.0000e+00 lowCoverage 0.71422 0.31658 0.3765686 4 0.72979 0.36119 0.3686055 2.2207e-13 1.0000e+00 lowCoverage 7.4022e-11 1.000000 lowCoverage 2.7677e-07 0.99999622 lowCoverage 9.2257e-05 1.00000 lowCoverage 0.3151241 4.4831e-03 lowCoverage 0.344854 lowCoverage 0.5969868 0.31658 0.2759044 4 0.5954768 0.36119 0.234289 2.2748e-04 9.9489e-01 lowCoverage 7.5825e-02 1.0000e+00 lowCoverage 1.3708e-02 9.9428e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.190829 1.1579e-01 lowCoverage 1.0000e+00 lowCoverage chr15 68235436 68236436 133444 TLE3 ENSG00000140332 0.87875 280 7 0.87579 223 7 0.69785 225 6 0.84037 222 7 0.84865 97 7 0.75542 275 7 0.88914 205 7 0.94258 192 6 0.87899 165 6 0.93719 183 6 0.87477 242 8 0.90920 165 6 0.87645 221 6 NA 0 0 0.89780 178 6 0.94495 92 6 0.83363 105 6 0.60449 271 6 0.88488 121 6 0.84784 233 6 0.92086 107 6 0.83771 122 6 0.90511 203 6 0.89321 113 6 0.90147 74 5 0.93585 277 7 0.70953 121 6 0.96050 60 5 0.87315 199 6 0.84958 297 6 0.93000 255 6 0.95731 369 7 0.0273990 188 7 0.0163644 157 6 0.2987013 79 5 0.540149 80 5 0.209013 145 7 0.402378 262 6 0.81207 302 6 0.77047 345 7 0.62155 259 7 0.66320 247 6 0.73154 299 7 0.87338 0.84194 0.72001 0.88910 0.81095 0.87552 0.90476 0.89417 0.83626 0.91932 0.90678 0.88375 0.868925 NA 0.89182 0.91505 0.83609 0.64756 0.86885 0.87113 0.87871 0.82307 0.88218 0.87943 0.91604 0.91151 0.80608 0.93701 0.86658 0.91844 0.87557 0.93061 0.0093148 0.01850891 0.06888924 0.5284728 0.031231 0.267402 0.824763 0.73714 0.779967 0.79258 0.71658 6 0.85432 0.88939 -0.03583694 6 0.85487 0.88919 -0.0343193 0.99958437 2.9917e-03 weaklyHypometh 1.00000 0.883196 insignificant 0.9981747 0.03716814 weaklyHypometh 1 1.00000 insignificant -0.0359060 0.207094 insignificant 1.000 insignificant 0.85440 0.1470911 0.705649 6 0.86806 0.2667819 0.6012818 1.0311e-60 9.9696e-01 hypermethylated 5.1556e-58 1.0000e+00 hypermethylated 3.7303e-16 9.9995e-01 hypermethylated 1.2434e-13 1.0000e+00 hypermethylated 0.6046178 6.2012e-04 hypermethylated 2.0671e-02 hypermethylated 0.85462 0.76928 9.3662e-02 6 0.87987 0.71008 0.1697945 2.4576e-05 9.8905e-01 weaklyHypermeth 1.2288e-03 1.000000 weaklyHypermeth 1.7698e-04 0.9994202 weaklyHypermeth 1.1799e-02 1.00000 weaklyHypermeth 0.1338548 1.2632e-02 weaklyHypermeth 0.54922613 insignificant 0.88939 0.1474147 0.73923788 6 0.88919 0.2934600 0.5957292 2.0543e-49 1.0000e+00 hypermethylated 1.0272e-46 1.0000e+00 hypermethylated 1.1972e-14 1.0000e+00 hypermethylated 5.9861e-12 1.00000000 hypermethylated 0.640524 4.5930e-04 hypermethylated 1.5310e-02 hypermethylated 0.89005 0.76981 0.1275390 6 0.92132 0.78897 0.1323486 1.3233e-09 1.0000e+00 weaklyHypermeth 1.8904e-07 1.000000 weaklyHypermeth 4.3117e-06 0.99999999 weaklyHypermeth 8.9032e-04 1.00000 weaklyHypermeth 0.1697608 4.0966e-03 weaklyHypermeth 0.344854 insignificant 0.1475771 0.76928 -0.6032038 7 0.2934600 0.71008 -0.416615 1.0000e+00 3.0579e-18 hypomethylated 1.0000e+00 5.0965e-16 hypomethylated 1.0000e+00 6.6565e-07 hypomethylated 1.0000e+00 8.3206e-05 hypomethylated -0.470763 1.6148e-03 weaklyHypometh 6.7285e-02 weaklyHypometh chr15 68552696 68553696 133470 ENSG00000200216 0.91998 130 6 0.74662 320 6 0.80917 145 6 0.89620 57 4 0.82728 106 5 0.92306 330 6 0.88277 196 6 0.89016 162 6 0.86469 124 6 0.93525 62 4 0.92367 291 6 0.88780 61 4 0.95938 96 4 0.93333 40 3 0.98325 126 4 0.95385 82 4 0.95238 18 3 0.84708 69 4 0.92845 131 6 0.92783 228 6 0.93207 79 6 0.81481 15 1 0.87714 158 6 0.89259 107 6 1.00000 7 0 0.89796 262 6 0.85549 130 6 0.90523 62 6 0.89478 128 6 0.89722 255 6 0.94441 233 6 0.96254 227 6 0.4000054 257 6 0.4437695 124 6 0.3489879 177 4 0.398148 33 1 0.364743 176 6 0.419470 213 6 0.88317 154 6 0.85157 208 6 0.84514 95 4 0.89192 81 5 0.84192 138 5 0.90811 0.88312 0.80149 0.90929 0.87075 0.92173 0.89079 0.90549 0.84906 0.95642 0.91733 0.84666 0.964466 0.93855 0.96418 0.89974 0.89774 0.84507 0.91193 0.92350 0.95352 0.78278 0.86047 0.93983 0.98748 0.90130 0.80698 0.86304 0.89952 0.90809 0.92057 0.95200 0.3912988 0.44282380 0.36363239 0.4746914 0.268205 0.399260 0.891476 0.89905 0.836728 0.87451 0.85038 2 0.90083 0.90319 -0.00120974 6 0.90007 0.90457 -0.0044974 0.75248993 5.1308e-01 insignificant 1.00000 1.000000 insignificant 0.5422676 0.61654942 insignificant 1 1.00000 insignificant -0.0065763 0.733689 lowCoverage 1.000 lowCoverage 0.90083 0.3836735 0.543146 6 0.90007 0.3769595 0.5231097 4.8651e-49 1.0000e+00 hypermethylated 1.6217e-46 1.0000e+00 hypermethylated 1.2175e-11 1.0000e+00 hypermethylated 1.2175e-09 1.0000e+00 hypermethylated 0.5037566 2.1243e-13 lowCoverage 2.3604e-11 lowCoverage 0.90083 0.84911 4.7775e-02 5 0.90007 0.85629 0.0437807 7.3451e-04 6.2326e-01 weaklyHypermeth 2.2258e-02 1.000000 weaklyHypermeth 7.6464e-03 0.6106596 weaklyHypermeth 2.3171e-01 1.00000 insignificant 0.0368662 3.9200e-02 lowCoverage 0.95610805 lowCoverage 0.90319 0.3836735 0.53259512 6 0.90457 0.3769595 0.5276071 3.6120e-31 1.0000e+00 hypermethylated 4.0133e-29 1.0000e+00 hypermethylated 3.1772e-10 1.0000e+00 hypermethylated 3.5464e-08 1.00000000 hypermethylated 0.510333 6.1006e-13 lowCoverage 1.2627e-10 lowCoverage 0.90319 0.84911 0.0467430 5 0.90457 0.85629 0.0482781 3.6717e-03 5.2299e-01 weaklyHypermeth 8.9554e-02 1.000000 weaklyHypermeth 1.1066e-02 0.25252082 weaklyHypermeth 3.6888e-01 1.00000 insignificant 0.0434425 2.5857e-02 weaklyHypermeth 0.938608 insignificant 0.3836735 0.84911 -0.5296316 5 0.3769595 0.85629 -0.479329 1.0000e+00 8.5228e-16 hypomethylated 1.0000e+00 1.2175e-13 hypomethylated 1.0000e+00 6.1946e-07 hypomethylated 1.0000e+00 8.3206e-05 hypomethylated -0.466890 1.3094e-09 lowCoverage 1.3094e-06 lowCoverage chr15 68571816 68572816 133471 ENSG00000200216 0.76684 184 5 0.55000 85 5 0.60993 109 6 0.81149 131 5 0.82575 49 2 0.83486 183 6 0.82966 77 5 0.79630 71 5 0.86909 85 5 0.84432 78 6 0.80996 141 6 0.76813 40 3 0.74632 92 5 0.14286 8 1 0.81095 87 5 0.75033 46 4 0.77273 46 4 0.49908 178 4 0.84361 95 5 0.78164 147 6 0.85985 72 5 0.77641 63 5 0.87781 132 4 0.52735 42 4 0.62981 132 4 0.80177 134 5 0.77083 59 6 0.73690 49 5 0.60376 51 5 0.77852 114 6 0.72820 104 5 0.85740 155 6 0.1340198 137 6 0.2424242 152 5 0.1375000 174 4 0.070738 115 4 0.178030 60 3 0.071429 205 5 0.77155 197 6 0.68871 171 5 0.71784 150 5 0.55485 188 5 0.66759 173 5 0.77182 0.58715 0.61891 0.84047 0.89187 0.82342 0.79720 0.74741 0.84602 0.88185 0.78723 0.83837 0.724456 0.66368 0.79497 0.62843 0.66036 0.36338 0.78413 0.74927 0.93229 0.84330 0.83036 0.60201 0.66215 0.79467 0.80717 0.92636 0.66561 0.81843 0.85994 0.80752 0.0782151 0.11679293 0.31193805 0.0280222 0.169665 0.017361 0.732061 0.74082 0.700422 0.56469 0.75374 3 0.73499 0.77396 -0.04496199 5 0.78395 0.72947 0.0544823 0.61175133 9.2627e-02 insignificant 1.00000 1.000000 insignificant 0.5090313 0.23651623 insignificant 1 1.00000 insignificant -0.0125260 0.801585 lowCoverage 1.000 lowCoverage 0.73499 0.0879905 0.633846 5 0.78395 0.1303403 0.6536129 1.0959e-33 1.0000e+00 hypermethylated 1.0959e-31 1.0000e+00 hypermethylated 1.1839e-13 1.0000e+00 hypermethylated 1.4799e-11 1.0000e+00 hypermethylated 0.5941680 1.1963e-11 lowCoverage 1.0876e-09 lowCoverage 0.73499 0.72014 5.2243e-02 5 0.78395 0.73817 0.0457828 3.5026e-02 6.9485e-01 weaklyHypermeth 6.6087e-01 1.000000 insignificant 2.3296e-01 0.8622758 insignificant 1.0000e+00 1.00000 insignificant 0.0530834 3.2721e-01 lowCoverage 1.00000000 lowCoverage 0.77326 0.0877817 0.67435484 5 0.63829 0.1140478 0.5242393 3.1632e-34 1.0000e+00 hypermethylated 6.3264e-32 1.0000e+00 hypermethylated 3.1917e-10 1.0000e+00 hypermethylated 3.5464e-08 1.00000000 hypermethylated 0.606694 2.1840e-10 lowCoverage 2.7300e-08 lowCoverage 0.77396 0.72014 0.0843826 5 0.72947 0.73817 -0.0086995 1.2261e-02 8.8534e-01 weaklyHypermeth 2.6654e-01 1.000000 insignificant 2.8971e-02 0.99342810 weaklyHypermeth 7.3108e-01 1.00000 insignificant 0.0656094 1.9797e-01 insignificant 1.000000 insignificant 0.0879905 0.72014 -0.6183700 5 0.1303403 0.73817 -0.607830 1.0000e+00 5.9440e-19 hypomethylated 1.0000e+00 1.1888e-16 hypomethylated 1.0000e+00 3.8865e-07 hypomethylated 1.0000e+00 7.7731e-05 hypomethylated -0.541085 2.5842e-06 lowCoverage 8.6140e-04 lowCoverage chr15 68875878 68876878 133489 ENSG00000156577 0.90673 150 5 0.88467 152 5 0.87092 135 5 0.88674 110 4 0.92774 82 5 0.89523 228 5 0.88624 86 5 0.84761 139 5 0.81544 127 4 0.94199 143 5 0.88788 153 5 0.81675 65 5 0.90868 184 5 0.92404 73 4 0.88862 199 5 0.90000 21 1 0.73413 41 4 0.89570 134 4 0.94473 106 5 0.92465 195 5 0.83889 51 5 0.84364 94 5 0.91542 120 4 0.92157 67 5 0.89405 66 4 0.90639 165 5 0.86513 107 5 0.88855 88 4 0.85437 115 5 0.95940 150 5 0.94994 150 5 0.93128 197 5 0.9172458 121 5 0.9572829 88 5 0.8968495 275 5 0.979167 35 3 0.900706 72 4 0.960256 139 5 0.97092 121 4 0.94971 135 4 0.93886 116 4 0.88125 108 4 0.92275 134 4 0.92036 0.86777 0.84608 0.88642 0.91241 0.86960 0.85921 0.83497 0.83603 0.92726 0.87861 0.87274 0.889965 0.92681 0.88140 0.86794 0.67718 0.89445 0.95347 0.91565 0.79659 0.88590 0.89543 0.90227 0.95088 0.91491 0.83437 0.85858 0.87998 0.96402 0.93766 0.92431 0.9257818 0.94794208 0.87188688 0.9777330 0.880089 0.948291 0.964984 0.93648 0.927727 0.97341 0.92486 4 0.88426 0.90657 -0.02145782 5 0.89084 0.90906 -0.0182106 0.92579342 6.6394e-02 insignificant 1.00000 1.000000 insignificant 0.9357510 0.15457149 insignificant 1 1.00000 insignificant -0.0129611 0.429007 lowCoverage 1.000 lowCoverage 0.88426 0.9082192 -0.020117 5 0.89084 0.9141202 -0.0232758 4.7095e-01 2.4299e-03 weaklyHypometh 1.0000e+00 3.0374e-01 insignificant 9.9602e-01 1.7048e-03 weaklyHypometh 1.0000e+00 5.6826e-01 insignificant -0.0508272 1.5611e-02 lowCoverage 2.7388e-01 lowCoverage 0.88426 0.93974 -6.0162e-02 4 0.89084 0.92832 -0.0374737 9.4517e-01 1.2459e-03 lowCoverage 1.0000e+00 0.311483 lowCoverage 9.9980e-01 0.0011813 lowCoverage 1.0000e+00 0.71384 lowCoverage -0.0482752 2.9788e-02 lowCoverage 0.76378826 lowCoverage 0.90657 0.9082192 -0.00074852 5 0.90906 0.9141202 -0.0050652 2.7645e-01 4.3267e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8148e-01 1.0099e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.037866 6.2386e-02 lowCoverage 7.8969e-01 lowCoverage 0.90657 0.93974 -0.0348193 4 0.90906 0.92832 -0.0192631 9.2242e-01 3.0685e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9794e-01 0.01184313 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0353141 9.6680e-02 lowCoverage 1.000000 lowCoverage 0.9082192 0.93974 -0.0502581 4 0.9141202 0.92832 -0.014198 3.6373e-01 1.0128e-01 lowCoverage 1.0000e+00 9.2074e-01 lowCoverage 6.5553e-01 1.5840e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.002552 9.0459e-01 lowCoverage 1.0000e+00 lowCoverage chr15 70189441 70190441 133558 ENSG00000223253 0.75805 93 6 0.63938 118 6 0.49821 48 4 0.76541 117 6 0.69306 48 5 0.74338 150 6 0.63009 44 5 0.64528 79 6 0.72619 33 3 0.65729 38 4 0.66246 158 6 0.66667 15 1 0.77083 55 4 0.80682 43 5 0.68535 55 6 0.66667 5 0 0.70581 42 2 0.83840 70 5 0.77971 73 6 0.72491 89 5 1.00000 22 3 0.76389 14 1 0.78393 67 6 0.65417 37 2 0.77222 39 4 0.62730 112 5 0.71875 31 2 0.83333 11 0 0.84401 63 6 0.80906 106 6 0.68464 121 5 0.75230 128 6 0.6058116 87 6 0.5915179 52 6 0.5861427 96 6 0.766667 11 0 0.682692 60 5 0.688065 124 6 0.78600 86 5 0.80222 102 6 0.73746 92 6 0.61285 60 5 0.76274 73 6 0.81769 0.71603 0.60661 0.80938 0.79900 0.82210 0.75684 0.75822 0.81610 0.76182 0.81323 0.75373 0.807836 0.89993 0.78463 0.83207 0.81170 0.87480 0.84418 0.80535 0.90276 0.68180 0.88150 0.81219 0.82765 0.72209 0.72854 0.87089 0.89628 0.83813 0.77624 0.82404 0.6993836 0.68759773 0.63998474 0.7253731 0.763490 0.796506 0.860008 0.87296 0.843546 0.79599 0.84344 0 0.73707 0.80533 -0.02044677 5 0.65728 0.76453 -0.1072492 0.92543464 5.5558e-01 insignificant 1.00000 1.000000 insignificant 0.9683000 0.42936294 insignificant 1 1.00000 insignificant -0.0671011 0.058562 lowCoverage 1.000 lowCoverage 0.73723 0.7162791 0.064403 6 0.69660 0.6200651 0.0765372 3.9365e-04 9.9874e-01 weaklyHypermeth 4.6312e-03 1.0000e+00 weaklyHypermeth 7.2790e-03 9.9914e-01 weaklyHypermeth 9.9712e-02 1.0000e+00 weaklyHypermeth 0.0497149 1.7619e-01 lowCoverage 1.0000e+00 lowCoverage 0.73910 0.79661 -4.1682e-02 6 0.75326 0.78316 -0.0298984 9.7421e-01 8.9863e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7878e-01 0.2916809 insignificant 1.0000e+00 1.00000 insignificant -0.0370556 3.6283e-01 lowCoverage 1.00000000 lowCoverage 0.80455 0.7162791 0.08364873 5 0.70566 0.6200651 0.0855987 4.6382e-03 9.9998e-01 weaklyHypermeth 4.8315e-02 1.0000e+00 weaklyHypermeth 4.2436e-03 9.9992e-01 weaklyHypermeth 6.1502e-02 1.00000000 weaklyHypermeth 0.116816 1.2963e-02 lowCoverage 2.4459e-01 lowCoverage 0.80702 0.79661 -0.0233366 5 0.77076 0.78316 -0.0123995 8.8695e-01 1.6621e-01 insignificant 1.0000e+00 1.000000 insignificant 7.4538e-01 0.47270306 insignificant 1.0000e+00 1.00000 insignificant 0.0300455 5.1208e-01 lowCoverage 1.000000 lowCoverage 0.7203791 0.79612 -0.1021270 6 0.6600868 0.74702 -0.086931 9.9585e-01 2.4403e-05 weaklyHypometh 1.0000e+00 5.4228e-04 weaklyHypometh 9.9636e-01 1.8027e-03 weaklyHypometh 1.0000e+00 4.2924e-02 weaklyHypometh -0.086770 8.5336e-02 lowCoverage 1.0000e+00 lowCoverage chr15 70981449 70982449 133577 ADPGK ENSG00000159322 0.71539 195 5 0.78364 64 5 0.38500 54 5 0.89885 181 5 0.63889 34 3 0.78743 152 5 0.88889 9 0 0.89610 66 5 0.84287 76 5 0.88909 47 5 0.92803 97 5 0.80000 17 3 0.76371 81 5 0.85000 18 0 0.78004 54 5 1.00000 26 3 1.00000 3 0 0.47125 243 5 0.97417 54 3 0.87072 97 5 0.69343 57 5 0.65860 99 5 0.82222 28 3 0.87361 26 2 0.61459 70 5 0.91629 106 5 0.78254 60 5 0.38333 18 1 0.74139 67 5 0.97500 59 5 0.94000 122 5 0.89549 142 5 0.0083333 151 5 0.0206349 107 5 0.0000000 60 2 0.010000 73 5 0.000000 35 5 0.000000 153 5 0.67829 149 5 0.76400 140 5 0.62059 155 5 0.44521 125 5 0.64702 141 5 0.85936 0.77989 0.37955 0.89745 0.63510 0.78727 0.88523 0.88932 0.84124 0.88678 0.92998 0.80000 0.913577 0.85227 0.78820 1.00000 0.94584 0.47322 0.97367 0.87011 0.83113 0.65175 0.82828 0.84848 0.61063 0.91581 0.78608 0.37121 0.74523 0.97159 0.94091 0.89183 0.0075758 0.02092352 0.00000000 0.0090909 0.000000 0.000000 0.666967 0.75837 0.618083 0.43373 0.64222 0 0.77806 0.81477 -0.03734734 5 0.65035 0.68053 -0.0301808 0.97535575 3.1439e-01 insignificant 1.00000 1.000000 insignificant 0.2252260 0.96366937 insignificant 1 1.00000 insignificant 0.0334947 0.585176 lowCoverage 1.000 lowCoverage 0.77905 0.0069085 0.772411 5 0.78042 0.0070504 0.7733675 5.7571e-40 1.0000e+00 hypermethylated 9.5951e-38 1.0000e+00 hypermethylated 2.2130e-14 1.0000e+00 hypermethylated 5.2958e-12 1.0000e+00 hypermethylated 0.8017086 2.8364e-15 lowCoverage 5.6728e-13 lowCoverage 0.77905 0.63380 1.4499e-01 5 0.78042 0.63550 0.1449211 7.1303e-04 9.9946e-01 weaklyHypermeth 2.2258e-02 1.000000 weaklyHypermeth 1.5374e-05 0.9999996 weaklyHypermeth 1.9218e-03 1.00000 weaklyHypermeth 0.1771816 2.2752e-02 lowCoverage 0.65135064 lowCoverage 0.81573 0.0069085 0.80935806 5 0.81663 0.0070504 0.8095844 9.9041e-40 1.0000e+00 hypermethylated 3.3014e-37 1.0000e+00 hypermethylated 4.5816e-12 1.0000e+00 hypermethylated 1.1454e-09 1.00000000 hypermethylated 0.768214 6.2147e-09 lowCoverage 6.9052e-07 lowCoverage 0.81573 0.63380 0.1835311 5 0.81663 0.63550 0.1811380 2.4589e-05 1.0000e+00 weaklyHypermeth 1.1177e-03 1.000000 weaklyHypermeth 1.9994e-04 0.99999658 weaklyHypermeth 1.5380e-02 1.00000 weaklyHypermeth 0.1436869 6.9941e-02 lowCoverage 1.000000 lowCoverage 0.0069085 0.63380 -0.6240237 5 0.0070504 0.63550 -0.628446 1.0000e+00 1.8261e-27 hypomethylated 1.0000e+00 9.1307e-25 hypomethylated 1.0000e+00 6.4555e-09 hypomethylated 1.0000e+00 3.1811e-06 hypomethylated -0.624527 2.7200e-04 lowCoverage 2.7200e-02 lowCoverage chr15 72030336 72031336 133658 LOXL1 ENSG00000129038 0.33934 145 6 0.39946 162 7 0.47997 155 6 0.37938 87 5 0.37960 76 6 0.45733 204 6 0.28591 156 6 0.50256 153 6 0.26810 158 6 0.48826 88 6 0.49418 194 7 0.39960 111 6 0.15239 175 6 NA 0 0 0.21492 136 6 0.46544 85 4 0.14046 143 6 0.16694 76 5 0.12928 127 6 0.25981 203 6 0.31316 66 6 0.12464 66 5 0.37166 137 6 0.35133 82 5 0.48753 57 5 0.53344 140 6 0.35703 127 6 0.40782 66 4 0.28488 108 6 0.34479 187 6 0.47849 173 6 0.48198 238 7 0.0310245 151 6 0.1348784 132 6 0.2357895 92 5 0.049963 79 5 0.416289 98 6 0.087704 196 7 0.19682 155 6 0.31491 181 7 0.21212 79 5 0.08165 113 5 0.21858 122 6 0.32447 0.33918 0.34993 0.38823 0.34032 0.43459 0.30157 0.42596 0.21367 0.36159 0.41916 0.35987 0.138481 NA 0.19292 0.48016 0.17413 0.17479 0.12847 0.23015 0.27011 0.11723 0.33851 0.43339 0.32392 0.40702 0.36655 0.42699 0.23494 0.32389 0.40906 0.38624 0.0256802 0.17663907 0.25225054 0.0522003 0.274676 0.057150 0.202179 0.24785 0.170177 0.07434 0.22832 5 0.32194 0.35798 -0.05459706 6 0.36928 0.43236 -0.0630794 0.95673781 1.5458e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9198707 0.13445163 insignificant 1 1.00000 insignificant -0.0410667 0.360731 insignificant 1.000 insignificant 0.32194 0.1430481 0.225890 6 0.36928 0.1437609 0.2255164 3.0117e-09 1.0000e+00 hypermethylated 5.2837e-08 1.0000e+00 hypermethylated 2.1653e-05 9.9994e-01 hypermethylated 6.1867e-04 1.0000e+00 hypermethylated 0.1777210 2.9308e-02 weaklyHypermeth 4.5090e-01 insignificant 0.32194 0.20000 9.6018e-02 6 0.36928 0.26432 0.1049558 6.4451e-04 9.9459e-01 weaklyHypermeth 2.0791e-02 1.000000 weaklyHypermeth 3.1434e-03 0.9963837 weaklyHypermeth 1.1498e-01 1.00000 insignificant 0.1321797 1.9964e-02 weaklyHypermeth 0.65135064 insignificant 0.35798 0.1430481 0.27920670 6 0.43236 0.1437609 0.2885958 3.7702e-12 1.0000e+00 hypermethylated 1.0772e-10 1.0000e+00 hypermethylated 2.5172e-05 9.9973e-01 hypermethylated 7.4035e-04 1.00000000 hypermethylated 0.218788 1.1852e-02 weaklyHypermeth 2.2792e-01 insignificant 0.35798 0.20000 0.1450256 6 0.43236 0.26432 0.1680352 4.1475e-07 9.9252e-01 weaklyHypermeth 3.7705e-05 1.000000 weaklyHypermeth 3.9125e-04 0.99435233 weaklyHypermeth 2.4453e-02 1.00000 weaklyHypermeth 0.1732464 5.3615e-03 weaklyHypermeth 0.382963 insignificant 0.1430481 0.20000 -0.0898582 6 0.1437609 0.26432 -0.120561 9.9790e-01 9.1082e-03 weaklyHypometh 1.0000e+00 1.1595e-01 insignificant 9.9625e-01 4.8064e-02 weaklyHypometh 1.0000e+00 6.2421e-01 insignificant -0.045541 5.3385e-01 insignificant 1.0000e+00 insignificant chr15 74240851 74241851 133731 C15orf27 ENSG00000169758 0.88720 202 8 0.82814 265 9 0.61383 162 8 0.90266 263 6 0.77761 86 6 0.94390 248 7 0.88163 133 7 0.79002 160 11 0.77466 119 8 0.80381 63 4 0.93336 393 11 0.68165 60 5 0.82837 113 6 0.85565 50 2 0.81170 106 6 0.84626 53 5 0.87037 18 2 0.80839 161 6 0.84481 205 9 0.83733 239 8 0.84801 94 7 0.66156 46 4 0.78040 127 6 0.79783 101 9 0.67537 321 9 0.81430 305 11 0.75281 87 8 0.88171 56 4 0.78873 164 11 0.81204 361 10 0.76241 326 11 0.95481 311 8 0.3532504 301 10 0.5065474 174 9 0.5056378 351 7 0.185110 90 4 0.436227 212 10 0.356623 334 10 0.66930 169 7 0.65904 196 8 0.61043 247 8 0.65570 104 6 0.68154 260 8 0.83025 0.79221 0.65728 0.89690 0.87310 0.88178 0.89515 0.79240 0.72717 0.82696 0.91955 0.67875 0.788317 0.77261 0.82017 0.73554 0.83340 0.76865 0.88659 0.81368 0.91874 0.74965 0.90938 0.90289 0.85774 0.88540 0.87695 0.96153 0.78778 0.85345 0.83019 0.93046 0.3421384 0.35945144 0.36554952 0.2910512 0.418827 0.331997 0.739842 0.73115 0.668549 0.45578 0.66911 2 0.85350 0.87576 -0.02237018 8 0.80983 0.75790 0.0519365 0.52680579 3.8855e-01 insignificant 1.00000 1.000000 insignificant 0.7884443 0.11225924 insignificant 1 1.00000 insignificant 0.0319004 0.284345 insignificant 1.000 insignificant 0.85345 0.3803975 0.470926 8 0.79521 0.4408520 0.3543535 4.8461e-44 1.0000e+00 hypermethylated 1.2115e-41 1.0000e+00 hypermethylated 3.2675e-16 9.9998e-01 hypermethylated 1.2434e-13 1.0000e+00 hypermethylated 0.4355007 1.2971e-04 hypermethylated 5.6398e-03 hypermethylated 0.85350 0.71795 1.5750e-01 7 0.80983 0.63008 0.1797556 2.3975e-12 1.0000e+00 weaklyHypermeth 4.7950e-10 1.000000 weaklyHypermeth 1.1433e-05 0.9999998 weaklyHypermeth 1.6333e-03 1.00000 weaklyHypermeth 0.1708658 1.0726e-07 weaklyHypermeth 0.00010726 weaklyHypermeth 0.87565 0.3803975 0.49704486 8 0.73927 0.4408520 0.2984219 7.5969e-38 9.9924e-01 hypermethylated 1.8992e-35 1.0000e+00 hypermethylated 5.2869e-13 9.9620e-01 hypermethylated 1.7623e-10 1.00000000 hypermethylated 0.403600 1.2401e-04 hypermethylated 4.8043e-03 hypermethylated 0.87582 0.71824 0.1827621 7 0.77404 0.65474 0.1192979 7.5720e-12 9.9999e-01 weaklyHypermeth 1.5144e-09 1.000000 weaklyHypermeth 5.3419e-06 0.99999614 weaklyHypermeth 8.9032e-04 1.00000 weaklyHypermeth 0.1389655 9.4884e-05 weaklyHypermeth 0.031628 weaklyHypermeth 0.3803975 0.71766 -0.3234280 7 0.4408520 0.60162 -0.160771 9.9859e-01 1.1775e-07 hypomethylated 1.0000e+00 5.6069e-06 hypomethylated 9.9994e-01 3.3829e-04 hypomethylated 1.0000e+00 9.9496e-03 hypomethylated -0.264635 2.5138e-03 weaklyHypometh 8.6683e-02 weaklyHypometh chr15 74263278 74264278 133732 C15orf27 ENSG00000169758 0.67724 130 8 0.73903 238 8 0.63001 290 10 0.85567 118 4 0.83425 179 9 0.89295 202 8 0.78698 386 10 0.66841 173 8 0.87808 191 8 0.81671 172 7 0.88354 326 10 0.82879 218 7 0.88093 204 8 0.88182 23 2 0.87758 172 8 0.75155 203 6 0.75279 166 6 0.73743 99 2 0.85263 202 8 0.77522 153 8 0.86754 67 4 0.80000 16 1 0.65888 132 8 0.73842 99 7 0.71111 24 1 0.89053 282 8 0.90900 88 7 0.83095 44 5 0.85253 202 6 0.91939 302 8 0.82338 210 8 0.91411 221 8 0.4223984 274 8 0.4083683 292 8 0.4900000 118 9 0.916667 20 0 0.640868 117 7 0.617758 295 8 0.64131 137 8 0.65380 171 10 0.75234 126 4 0.90432 52 3 0.71832 153 6 0.86249 0.65758 0.56795 0.89098 0.81887 0.94597 0.84194 0.82695 0.85226 0.79519 0.87573 0.74356 0.857773 0.81064 0.86749 0.77953 0.72174 0.75890 0.85694 0.81434 0.84645 0.84951 0.78926 0.71955 0.87194 0.87911 0.88552 0.79362 0.82561 0.90838 0.80440 0.89367 0.4069003 0.39039440 0.55339806 0.9158576 0.559479 0.813672 0.814372 0.77395 0.914480 0.88673 0.78059 0 0.82159 0.86248 -0.04429289 8 0.78419 0.79103 -0.0068344 0.99972465 1.2085e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9791852 0.04410194 weaklyHypometh 1 1.00000 insignificant -0.0262395 0.397910 insignificant 1.000 insignificant 0.82175 0.5878136 0.238424 8 0.81261 0.5119183 0.3006915 7.1086e-19 1.0000e+00 hypermethylated 2.4512e-17 1.0000e+00 hypermethylated 7.7921e-05 9.9895e-01 hypermethylated 1.8553e-03 1.0000e+00 hypermethylated 0.2174046 3.7136e-02 weaklyHypermeth 5.3051e-01 insignificant 0.82159 0.75117 4.2994e-02 4 0.78419 0.73943 0.0447618 1.1766e-02 1.2137e-02 lowCoverage 2.6740e-01 1.000000 lowCoverage 1.3339e-01 0.0202167 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0660622 2.4582e-01 insignificant 1.00000000 insignificant 0.86350 0.5878136 0.27956884 8 0.87013 0.5119183 0.3582093 1.1427e-16 1.0000e+00 hypermethylated 5.7135e-15 1.0000e+00 hypermethylated 1.7215e-04 9.9998e-01 hypermethylated 3.7425e-03 1.00000000 hypermethylated 0.243644 2.4142e-02 weaklyHypermeth 4.0237e-01 insignificant 0.86248 0.75117 0.0694298 4 0.79103 0.73943 0.0515962 2.6587e-03 3.3104e-01 lowCoverage 7.5964e-02 1.000000 lowCoverage 2.6622e-01 0.34787066 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0923017 1.3133e-01 insignificant 1.000000 insignificant 0.5878136 0.75078 -0.2272291 4 0.5119183 0.71337 -0.201453 9.2719e-01 1.4186e-07 lowCoverage 1.0000e+00 6.4483e-06 lowCoverage 9.3270e-01 1.4299e-03 lowCoverage 1.0000e+00 3.8593e-02 lowCoverage -0.151342 1.3434e-01 insignificant 1.0000e+00 insignificant chr15 75706042 75707042 133814 HMG20A ENSG00000140382 0.73494 558 8 0.67014 239 8 0.77104 273 8 0.69202 464 8 0.67730 163 8 0.81798 533 8 0.73774 244 8 0.63264 272 8 0.71660 257 8 0.78310 209 8 0.70999 280 8 0.78846 128 8 0.70746 217 8 0.57886 132 8 0.73958 278 8 0.75649 75 8 0.69676 33 3 0.67997 1125 8 0.81320 371 8 0.71726 440 8 0.83316 85 7 0.69364 153 8 0.75970 254 8 0.57886 111 8 0.66770 163 8 0.64065 376 8 0.59408 147 8 0.73985 106 8 0.71054 271 8 0.67760 435 8 0.67831 397 8 0.78688 374 8 0.4038050 278 8 0.3155948 301 8 0.0000000 1 0 0.333333 14 2 0.450395 310 8 0.460799 455 8 0.52667 529 8 0.56461 413 8 0.62335 313 8 0.77062 853 8 0.59718 334 8 0.73768 0.65634 0.76305 0.66121 0.66676 0.81566 0.71310 0.63505 0.69533 0.73201 0.70558 0.75897 0.678548 0.65106 0.68275 0.72903 0.71414 0.65617 0.81117 0.70947 0.83734 0.64146 0.74757 0.57751 0.64624 0.62338 0.55579 0.73372 0.69774 0.65728 0.67647 0.77109 0.4026770 0.29096146 NA 0.3990757 0.437760 0.465325 0.516225 0.55456 0.622974 0.76757 0.57566 8 0.72933 0.69533 0.02878109 8 0.72144 0.69517 0.0262662 0.07477739 9.9009e-01 insignificant 1.00000 1.000000 insignificant 0.1851802 0.98144355 insignificant 1 1.00000 insignificant 0.0243265 0.349942 insignificant 1.000 insignificant 0.72933 0.4488595 0.285465 8 0.72144 0.4258909 0.2955482 9.3390e-29 1.0000e+00 hypermethylated 5.8369e-27 1.0000e+00 hypermethylated 1.0767e-11 1.0000e+00 hypermethylated 1.1963e-09 1.0000e+00 hypermethylated 0.3937554 2.0960e-03 weaklyHypermeth 6.2097e-02 weaklyHypermeth 0.72933 0.65971 8.6729e-02 8 0.72144 0.62780 0.0936362 3.0123e-07 9.9983e-01 weaklyHypermeth 2.5103e-05 1.000000 weaklyHypermeth 2.0361e-05 0.9999997 weaklyHypermeth 2.2623e-03 1.00000 weaklyHypermeth 0.1045907 6.4473e-02 insignificant 1.00000000 insignificant 0.69533 0.4488595 0.25233396 8 0.69517 0.4258909 0.2692820 5.1705e-16 1.0000e+00 hypermethylated 2.3502e-14 1.0000e+00 hypermethylated 5.4431e-10 1.0000e+00 hypermethylated 4.5360e-08 1.00000000 hypermethylated 0.369429 2.3393e-03 weaklyHypermeth 6.4980e-02 weaklyHypermeth 0.69533 0.65971 0.0583504 8 0.69517 0.62780 0.0673700 3.9709e-03 9.9310e-01 weaklyHypermeth 9.4545e-02 1.000000 weaklyHypermeth 2.8057e-03 0.99966273 weaklyHypermeth 1.1690e-01 1.00000 insignificant 0.0802642 1.3689e-01 insignificant 1.000000 insignificant 0.4488595 0.65971 -0.1926194 8 0.4258909 0.62780 -0.201912 1.0000e+00 2.0105e-06 weaklyHypometh 1.0000e+00 5.5846e-05 weaklyHypometh 9.9996e-01 4.8024e-05 weaklyHypometh 1.0000e+00 2.2869e-03 weaklyHypometh -0.289165 7.5338e-03 weaklyHypometh 1.9105e-01 insignificant chr15 75877453 75878453 133830 LINGO1 ENSG00000169783 0.88045 420 8 0.83963 293 7 0.75905 316 9 0.92362 398 8 0.74631 186 9 0.79084 532 8 0.77907 268 7 0.84467 266 9 0.69017 329 8 0.84609 261 8 0.91781 291 9 0.87902 170 6 0.69593 272 6 0.92450 103 3 0.77595 236 6 0.67457 126 5 0.67793 135 5 0.74293 435 8 0.82586 248 8 0.91885 352 8 0.77811 127 8 0.85289 168 5 0.89536 263 9 0.93995 152 7 0.88732 235 7 0.91817 349 7 0.83705 171 9 0.86796 183 7 0.70587 312 7 0.82373 411 8 0.83231 360 9 0.92111 389 9 0.6642462 314 7 0.7312715 170 8 0.5454545 202 8 0.475322 144 6 0.581427 282 9 0.731570 364 9 0.70810 465 9 0.85452 367 9 0.77834 388 8 0.83013 355 7 0.67546 390 9 0.84206 0.74030 0.82387 0.90718 0.85490 0.88686 0.87743 0.85382 0.83320 0.89557 0.87510 0.87128 0.869778 0.84084 0.86670 0.81775 0.81317 0.81345 0.90036 0.86246 0.91603 0.83399 0.88567 0.91393 0.87562 0.90665 0.79253 0.89205 0.86768 0.90885 0.92102 0.89505 0.5345170 0.56640360 0.50228820 0.4005324 0.592474 0.552011 0.842644 0.83348 0.878004 0.90029 0.70310 6 0.86890 0.89295 -0.02416954 7 0.71557 0.76535 -0.0497774 0.99623303 4.9602e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9988471 0.04359402 weaklyHypometh 1 1.00000 insignificant -0.0483225 0.085273 insignificant 1.000 insignificant 0.86890 0.6822493 0.204810 7 0.71557 0.5119968 0.2035774 1.7280e-19 9.6081e-01 hypermethylated 6.4001e-18 1.0000e+00 hypermethylated 2.3648e-05 9.9097e-01 hypermethylated 6.5690e-04 1.0000e+00 hypermethylated 0.1851137 5.2946e-03 weaklyHypermeth 1.2313e-01 insignificant 0.86947 0.83613 3.6870e-02 8 0.74743 0.67830 0.0691297 2.1976e-03 4.8400e-01 weaklyHypermeth 6.1045e-02 1.000000 weaklyHypermeth 3.2185e-02 0.4603295 weaklyHypermeth 7.6632e-01 1.00000 insignificant 0.0373525 3.7504e-01 insignificant 1.00000000 insignificant 0.89295 0.6822493 0.22103289 7 0.76535 0.5119968 0.2533548 2.9320e-14 9.9958e-01 hypermethylated 1.0859e-12 1.0000e+00 hypermethylated 2.1966e-05 9.9995e-01 hypermethylated 6.6564e-04 1.00000000 hypermethylated 0.233436 1.5368e-03 weaklyHypermeth 4.3909e-02 weaklyHypermeth 0.89345 0.83613 0.0646294 7 0.78746 0.67830 0.1091663 3.6925e-04 8.8337e-01 weaklyHypermeth 1.2733e-02 1.000000 weaklyHypermeth 5.0945e-03 0.99134257 weaklyHypermeth 1.8195e-01 1.00000 insignificant 0.0856750 6.7857e-02 insignificant 1.000000 insignificant 0.6827119 0.83613 -0.1495539 7 0.5546632 0.67830 -0.123635 6.7624e-01 3.8422e-05 weaklyHypometh 1.0000e+00 8.3527e-04 weaklyHypometh 8.5312e-01 1.1169e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.147761 2.4800e-02 weaklyHypometh 4.3509e-01 insignificant chr15 75975852 75976852 133834 LINGO1 ENSG00000169783 0.94220 208 10 0.91217 120 5 0.85871 84 9 0.87701 236 10 0.87610 63 9 0.87884 351 12 0.71239 72 5 0.81786 148 5 0.83872 75 5 0.80286 96 9 0.84114 310 11 0.85714 28 2 0.74526 142 5 0.75143 53 4 0.75261 78 4 0.77083 14 0 0.65657 18 2 0.90992 523 11 0.96881 294 11 0.81516 421 11 0.86686 69 5 0.90265 103 9 0.61694 64 5 0.77691 76 5 0.93681 146 8 0.95962 165 9 0.90928 152 9 0.49592 54 3 0.82621 262 9 0.88374 173 5 0.81268 207 9 0.84917 238 9 0.7635185 123 9 0.7227992 132 9 0.7472222 158 8 0.905093 122 5 0.717882 104 9 0.799380 167 9 0.93485 130 11 0.93243 140 9 0.92614 107 10 0.89196 209 10 0.95886 171 11 0.93211 0.84243 0.72325 0.95379 0.82191 0.88659 0.71438 0.84249 0.88846 0.90008 0.91632 0.70123 0.865700 0.81009 0.85858 0.76991 0.72937 0.89872 0.91798 0.89413 0.86605 0.84140 0.89027 0.82082 0.91882 0.85422 0.80602 0.92246 0.84175 0.90793 0.79683 0.93412 0.6568100 0.45031935 0.73924731 0.8886821 0.934751 0.694013 0.940572 0.92081 0.916253 0.93475 0.88285 1 0.90450 0.89279 -0.00422353 9 0.70055 0.69609 0.0044613 0.93137545 2.7390e-01 insignificant 1.00000 1.000000 insignificant 0.9973324 0.48425103 insignificant 1 1.00000 insignificant 0.0095557 0.827478 insignificant 1.000 insignificant 0.90450 0.8151365 0.078649 9 0.70055 0.7081478 -0.0075934 4.1337e-02 7.8584e-01 weaklyHypermeth 3.7241e-01 1.0000e+00 insignificant 7.0302e-01 8.0658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0533052 1.4655e-01 insignificant 1.0000e+00 insignificant 0.90785 0.93395 -2.3690e-02 9 0.87592 0.93926 -0.0633374 5.2374e-01 1.3660e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.3734e-01 0.0493449 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0995594 9.4534e-05 weaklyHypometh 0.01765406 weaklyHypometh 0.89384 0.8161491 0.09892910 9 0.73273 0.7454187 -0.0126892 8.9950e-04 8.5161e-01 weaklyHypermeth 1.0582e-02 1.0000e+00 weaklyHypermeth 2.5054e-01 9.2791e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.043750 3.8058e-01 insignificant 1.0000e+00 insignificant 0.89757 0.93395 -0.0270681 9 0.85738 0.93926 -0.0818841 7.5220e-01 1.0916e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1288e-01 0.34276415 insignificant 1.0000e+00 1.00000 insignificant -0.1091151 1.9360e-02 weaklyHypometh 0.879990 insignificant 0.8179520 0.93395 -0.0989185 9 0.8469130 0.93926 -0.092348 6.9234e-01 4.9945e-04 weaklyHypometh 1.0000e+00 8.3241e-03 weaklyHypometh 8.8749e-01 1.0034e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.152865 2.0370e-03 weaklyHypometh 7.5445e-02 weaklyHypometh chr15 75976454 75977454 133835 LINGO1 ENSG00000169783 0.91207 435 11 0.83937 358 11 0.83928 332 11 0.89351 533 11 0.87083 182 7 0.91302 475 12 0.77754 194 10 0.88419 248 11 0.90500 192 9 0.89761 262 11 0.82267 500 10 0.75849 143 4 0.86136 383 11 NA 0 0 0.88426 305 11 0.82412 94 2 0.72108 131 7 0.84852 540 11 0.82746 508 12 0.82770 428 12 0.66624 222 10 0.84248 195 10 0.76556 505 12 0.72790 132 9 0.93073 152 10 0.84150 303 11 0.77938 234 10 0.77143 88 9 0.88192 381 11 0.88492 388 12 0.89454 363 12 0.88582 442 12 0.6714559 216 11 0.7474797 276 11 0.5190996 354 7 0.847357 226 7 0.709250 216 11 0.820701 360 12 0.88202 398 11 0.95726 477 12 0.90004 380 11 0.93425 505 12 0.91476 484 11 0.90710 0.78242 0.70237 0.91545 0.72964 0.81022 0.79382 0.82207 0.77374 0.80235 0.75769 0.65767 0.781986 NA 0.76767 0.63076 0.65645 0.91965 0.76451 0.81888 0.71360 0.87248 0.74092 0.78222 0.93103 0.81713 0.71027 0.81857 0.77238 0.85091 0.83244 0.85986 0.5634924 0.62621120 0.59079978 0.7623999 0.743106 0.777010 0.920179 0.95282 0.915996 0.92856 0.89613 7 0.81090 0.81840 0.00668134 11 0.85374 0.83423 0.0195122 0.01605396 9.6025e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.1184870 0.76675527 insignificant 1 1.00000 insignificant 0.0250918 0.349264 insignificant 1.000 insignificant 0.81077 0.6820388 0.132066 12 0.80038 0.6762504 0.1241289 1.1819e-13 1.0000e+00 weaklyHypermeth 2.8826e-12 1.0000e+00 weaklyHypermeth 1.0011e-04 1.0000e+00 weaklyHypermeth 2.3280e-03 1.0000e+00 weaklyHypermeth 0.1285697 4.4010e-02 weaklyHypermeth 6.1593e-01 insignificant 0.81101 0.92112 -1.1014e-01 11 0.87273 0.92257 -0.0498453 5.9149e-01 2.8787e-03 weaklyHypometh 1.0000e+00 0.575730 insignificant 3.7895e-01 0.0451147 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0698706 2.1105e-03 weaklyHypometh 0.16584903 insignificant 0.81840 0.6824529 0.11197831 11 0.83423 0.7213338 0.1128919 5.0504e-08 9.8316e-01 weaklyHypermeth 9.1826e-07 1.0000e+00 weaklyHypermeth 1.5948e-04 9.3466e-01 weaklyHypermeth 3.5439e-03 1.00000000 weaklyHypermeth 0.103478 9.2318e-02 insignificant 1.0000e+00 insignificant 0.81933 0.92112 -0.1027172 10 0.84487 0.92257 -0.0777078 9.6993e-01 5.4208e-04 weaklyHypometh 1.0000e+00 0.271039 insignificant 8.3880e-01 0.02331622 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0949624 2.7401e-03 weaklyHypometh 0.304461 insignificant 0.6821516 0.92112 -0.2476924 11 0.7350006 0.92257 -0.187573 1.0000e+00 2.3304e-11 hypomethylated 1.0000e+00 1.5536e-09 hypomethylated 9.9976e-01 4.3796e-06 hypomethylated 1.0000e+00 3.1283e-04 hypomethylated -0.198440 8.1345e-03 weaklyHypometh 1.9105e-01 insignificant chr15 75977087 75978087 133836 LINGO1 ENSG00000169783 0.87933 191 5 0.78223 216 6 0.82177 181 6 0.84217 207 5 0.79500 144 2 0.87949 236 6 0.75029 89 5 0.85778 164 6 0.86028 97 4 0.83543 161 6 0.70756 331 5 0.66210 101 2 0.78343 276 6 NA 0 0 0.83658 198 6 0.74824 80 2 0.62747 90 2 0.74088 239 5 0.80963 393 6 0.82754 226 6 0.66988 158 5 0.81533 90 5 0.66439 298 6 0.68714 71 4 0.95238 63 5 0.77592 152 5 0.65588 142 5 0.75185 36 4 0.77566 261 6 0.82211 223 6 0.80085 197 6 0.89773 197 6 0.7263074 131 6 0.8042419 206 6 0.7214539 211 5 0.873039 50 2 0.774666 133 6 0.862999 173 6 0.86368 128 5 0.96885 210 6 0.89902 143 5 0.93769 196 6 0.90078 194 5 0.88940 0.69422 0.61709 0.89577 0.59554 0.72902 0.68911 0.76040 0.65737 0.69495 0.64989 0.51470 0.689668 NA 0.66674 0.47803 0.54955 0.90467 0.66600 0.73907 0.66873 0.83253 0.61704 0.69388 0.95015 0.73679 0.56792 0.74143 0.64100 0.76628 0.73807 0.83639 0.5646761 0.61873100 0.65883249 0.6805036 0.735106 0.778560 0.925269 0.95212 0.919553 0.92870 0.86680 2 0.72238 0.72881 0.01222341 6 0.80726 0.76572 0.0415384 0.00037346 7.6619e-01 weaklyHypermeth 0.37346 1.000000 insignificant 0.0019303 0.38215661 weaklyHypermeth 1 1.00000 insignificant 0.0195304 0.543718 lowCoverage 1.000 lowCoverage 0.72238 0.7267699 0.039614 6 0.80726 0.7753094 0.0319508 1.3589e-01 9.6332e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5258e-01 9.3396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0018276 9.5462e-01 lowCoverage 1.0000e+00 lowCoverage 0.72238 0.92078 -1.9948e-01 5 0.80726 0.92480 -0.1175394 9.8035e-01 7.6276e-05 weaklyHypometh 1.0000e+00 0.076276 weaklyHypometh 9.3639e-01 0.0014277 weaklyHypometh 1.0000e+00 0.71384 insignificant -0.1220453 3.3952e-04 lowCoverage 0.04243968 lowCoverage 0.72881 0.7267699 0.01546421 6 0.76572 0.7753094 -0.0095876 5.1883e-01 2.1334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2542e-01 1.0281e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.021358 5.8297e-01 insignificant 1.0000e+00 insignificant 0.72881 0.92078 -0.1949857 5 0.76572 0.92480 -0.1590778 9.9962e-01 8.2010e-06 weaklyHypometh 1.0000e+00 0.008201 weaklyHypometh 9.9948e-01 0.00045212 weaklyHypometh 1.0000e+00 0.45212 insignificant -0.1415757 5.7805e-04 weaklyHypometh 0.096342 weaklyHypometh 0.7267699 0.92078 -0.2148073 5 0.7753094 0.92480 -0.149490 9.8970e-01 1.2177e-05 hypomethylated 1.0000e+00 2.8993e-04 hypomethylated 9.5986e-01 9.9410e-03 weaklyHypometh 1.0000e+00 1.7752e-01 insignificant -0.120218 5.2492e-03 weaklyHypometh 1.5439e-01 insignificant chr15 75980447 75981447 133839 LINGO1 ENSG00000169783 0.82220 240 6 0.78983 342 6 0.72692 375 6 0.86576 167 6 0.69797 435 6 0.86166 298 6 0.72295 274 6 0.82698 289 6 0.68159 263 6 0.86056 248 6 0.75835 314 6 0.64168 294 4 0.81460 386 6 0.71528 108 3 0.73383 403 6 0.61599 465 4 0.76070 222 3 0.86002 234 6 0.73941 342 6 0.85831 191 6 0.79635 175 5 0.87479 104 6 0.81696 227 6 0.85820 122 5 0.83613 68 6 0.86284 369 6 0.82679 149 6 0.79655 121 4 0.83282 296 6 0.86243 368 6 0.86185 366 6 0.86500 255 6 0.7169741 272 6 0.6437896 250 5 0.1818182 37 3 0.892857 32 4 0.737103 242 6 0.707026 338 6 0.81082 196 6 0.85065 186 6 0.84222 168 6 0.83253 215 6 0.89174 151 5 0.79310 0.64205 0.58088 0.83512 0.57473 0.86082 0.60718 0.76823 0.60126 0.73551 0.61461 0.57196 0.667271 0.75775 0.65499 0.58324 0.53166 0.85152 0.62730 0.79884 0.63244 0.87587 0.72236 0.74450 0.77161 0.74531 0.74400 0.75839 0.75455 0.74701 0.77467 0.82956 0.5901678 0.38280192 0.35659702 0.9607143 0.580275 0.428789 0.838856 0.76332 0.813590 0.73702 0.80775 3 0.67657 0.81718 -0.08521415 6 0.77088 0.85029 -0.0794082 0.99997882 1.5948e-05 weaklyHypometh 1.00000 0.015948 weaklyHypometh 0.9999818 0.00089203 weaklyHypometh 1 0.89203 insignificant -0.0731629 0.000673 weaklyHypometh 0.673 insignificant 0.67657 0.5892400 0.129921 6 0.77088 0.6729414 0.0979369 8.5672e-06 9.2920e-01 weaklyHypermeth 1.1423e-04 1.0000e+00 weaklyHypermeth 8.4721e-02 8.7490e-01 insignificant 8.2253e-01 1.0000e+00 insignificant 0.1211347 2.7861e-01 insignificant 1.0000e+00 insignificant 0.67657 0.82533 -1.0671e-01 6 0.77088 0.85910 -0.0882244 9.0886e-01 6.1521e-03 weaklyHypometh 1.0000e+00 0.878870 insignificant 8.5527e-01 0.0326174 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0778643 2.1560e-03 weaklyHypometh 0.16584903 insignificant 0.81718 0.5892400 0.21333456 6 0.85029 0.6729414 0.1773451 2.8572e-09 9.9821e-01 hypermethylated 6.3494e-08 1.0000e+00 hypermethylated 1.0537e-03 9.9803e-01 weaklyHypermeth 1.9513e-02 1.00000000 weaklyHypermeth 0.194298 1.0680e-01 insignificant 1.0000e+00 insignificant 0.81718 0.82533 -0.0224946 6 0.85029 0.85910 -0.0088163 2.4284e-01 4.1767e-01 insignificant 1.0000e+00 1.000000 insignificant 5.1541e-01 0.41368876 insignificant 1.0000e+00 1.00000 insignificant -0.0047014 7.7017e-01 insignificant 1.000000 insignificant 0.5892400 0.82533 -0.2328773 6 0.6729414 0.85910 -0.186161 8.8917e-01 8.3867e-05 hypomethylated 1.0000e+00 1.7472e-03 hypomethylated 9.2836e-01 4.0129e-02 weaklyHypometh 1.0000e+00 5.4971e-01 insignificant -0.198999 1.0073e-01 insignificant 1.0000e+00 insignificant chr15 76067467 76068467 133849 ENSG00000214646 0.90198 822 12 0.79787 266 11 0.83525 421 12 0.86148 507 11 0.91423 264 12 0.93197 596 11 0.89971 488 12 0.86846 470 11 0.89294 368 12 0.95845 372 12 0.91226 462 12 0.93557 232 10 0.95257 381 12 0.91564 283 11 0.88618 535 12 0.84362 201 9 0.81469 42 3 0.85654 913 11 0.70733 430 12 0.93809 597 11 0.92544 153 11 0.91879 73 4 0.87944 352 12 0.90840 190 10 0.89576 113 11 0.91322 356 12 0.73894 392 12 0.80266 241 11 0.90984 462 11 0.93014 330 11 0.92118 404 12 0.93818 602 12 0.5914262 434 11 0.6819825 378 12 0.2816833 564 10 0.610714 110 10 0.497447 329 11 0.722934 553 11 0.81173 524 12 0.74390 403 12 0.86567 474 11 0.79940 823 12 0.86550 440 12 0.89118 0.71040 0.82278 0.91839 0.91353 0.93717 0.92712 0.89510 0.89768 0.95706 0.90503 0.90378 0.945277 0.92069 0.90509 0.82569 0.87358 0.85645 0.92864 0.93355 0.93363 0.91598 0.91558 0.90878 0.95815 0.91390 0.84041 0.90279 0.89049 0.93254 0.92412 0.92946 0.5213524 0.59196024 0.30571755 0.5980826 0.524356 0.721212 0.858781 0.84985 0.838755 0.85206 0.83387 8 0.89942 0.90964 -0.00969721 11 0.74718 0.76473 -0.0175494 0.93733504 4.1731e-01 insignificant 1.00000 1.000000 insignificant 0.9922273 0.36950804 insignificant 1 1.00000 insignificant -0.0089244 0.687194 insignificant 1.000 insignificant 0.89961 0.5450625 0.368736 11 0.82995 0.5295799 0.3003721 9.8053e-44 9.7000e-01 hypermethylated 1.9611e-41 1.0000e+00 hypermethylated 5.7063e-14 9.8285e-01 hypermethylated 8.1518e-12 1.0000e+00 hypermethylated 0.3168769 3.9653e-03 weaklyHypermeth 9.4412e-02 weaklyHypermeth 0.89950 0.83671 5.1875e-02 12 0.75192 0.71779 0.0341259 3.5322e-05 1.0000e+00 weaklyHypermeth 1.6820e-03 1.000000 weaklyHypermeth 5.9103e-04 0.9999989 weaklyHypermeth 2.9262e-02 1.00000 weaklyHypermeth 0.0640026 4.5975e-02 weaklyHypermeth 1.00000000 insignificant 0.91006 0.5337838 0.37385385 11 0.80824 0.4964811 0.3117586 1.2264e-26 1.0000e+00 hypermethylated 1.0220e-24 1.0000e+00 hypermethylated 8.7608e-11 9.9998e-01 hypermethylated 1.4601e-08 1.00000000 hypermethylated 0.325801 3.2477e-03 weaklyHypermeth 8.3273e-02 weaklyHypermeth 0.90961 0.83671 0.0623437 11 0.75089 0.71779 0.0330998 3.4400e-05 1.0000e+00 weaklyHypermeth 1.4957e-03 1.000000 weaklyHypermeth 1.9128e-03 0.99999721 weaklyHypermeth 8.6944e-02 1.00000 weaklyHypermeth 0.0729270 3.1491e-02 weaklyHypermeth 0.954264 insignificant 0.5360598 0.83741 -0.3500430 11 0.4959784 0.72875 -0.232770 9.9763e-01 3.3778e-10 hypomethylated 1.0000e+00 2.1111e-08 hypomethylated 9.9899e-01 1.4259e-05 hypomethylated 1.0000e+00 8.3877e-04 hypomethylated -0.252874 9.7918e-03 weaklyHypometh 2.1286e-01 insignificant chr15 76068976 76069976 133850 ENSG00000214646 0.93005 378 7 0.78940 199 9 0.87061 167 8 0.94538 282 6 0.96106 68 3 0.95015 353 7 0.49567 110 2 0.80278 175 7 0.70641 153 9 0.80211 188 6 0.71048 263 6 0.87560 60 2 0.84034 201 8 0.97361 106 6 0.77217 191 9 0.92895 96 5 0.66165 135 1 0.86461 491 6 0.87678 273 6 0.75897 238 7 0.65261 97 6 0.93285 123 6 0.90394 120 6 0.73887 118 7 0.92789 335 6 0.83366 220 6 0.66628 195 7 0.54735 113 5 0.85741 221 8 0.64867 244 6 0.83823 203 6 0.86213 257 6 0.7440883 134 6 0.8148148 172 6 0.8143939 72 6 0.750000 10 0 0.585823 168 7 0.615481 291 6 0.89163 143 8 0.81079 240 8 0.91187 239 6 0.92333 288 9 0.76789 175 6 0.87207 0.77809 0.87161 0.95762 0.90304 0.91743 0.80036 0.85150 0.77858 0.90872 0.89610 0.86131 0.940907 0.90832 0.78181 0.81649 0.96008 0.85905 0.93037 0.91938 0.87096 0.87565 0.89917 0.95839 0.84671 0.94406 0.83805 0.77560 0.92586 0.90374 0.90602 0.92622 0.6490136 0.72852557 0.76330162 0.9571018 0.757561 0.772206 0.912216 0.92168 0.928459 0.92868 0.92962 2 0.88490 0.88666 -0.00504314 6 0.80439 0.77505 0.0293401 0.00478401 6.1158e-01 inconclusive 1.00000 1.000000 insignificant 0.0091116 0.85631257 inconclusive 1 1.00000 insignificant 0.0416818 0.372397 insignificant 1.000 insignificant 0.88509 0.7340426 0.145730 6 0.83206 0.5593453 0.2727177 7.2880e-14 9.7745e-01 weaklyHypermeth 1.8220e-12 1.0000e+00 weaklyHypermeth 7.0562e-03 6.9543e-01 weaklyHypermeth 9.8003e-02 1.0000e+00 weaklyHypermeth 0.1050722 5.4679e-02 insignificant 7.2905e-01 insignificant 0.88517 0.90230 -1.7646e-02 7 0.83194 0.86346 -0.0315289 8.4300e-01 4.1452e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.5251e-01 0.1543718 insignificant 1.0000e+00 1.00000 insignificant -0.0352630 4.0355e-01 insignificant 1.00000000 insignificant 0.88656 0.7331759 0.15589826 6 0.77505 0.5127332 0.2623178 7.5556e-07 9.8354e-01 weaklyHypermeth 1.2386e-05 1.0000e+00 weaklyHypermeth 1.8865e-01 8.5955e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.063390 2.6703e-01 insignificant 1.0000e+00 insignificant 0.88824 0.90230 -0.0120273 6 0.78006 0.86346 -0.0834036 8.1455e-01 1.0711e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.6954e-01 0.06523602 insignificant 1.0000e+00 1.00000 insignificant -0.0769448 1.3190e-01 insignificant 1.000000 insignificant 0.7349112 0.90230 -0.1606301 6 0.6152798 0.86346 -0.248185 9.9232e-01 3.8074e-07 weaklyHypometh 1.0000e+00 1.4102e-05 weaklyHypometh 7.7997e-01 1.5467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.140335 2.1740e-02 weaklyHypometh 3.8822e-01 insignificant chr15 76468441 76469441 133854 CRABP1 ENSG00000166426 0.68406 250 5 0.54908 255 5 0.73986 133 5 0.72616 295 5 0.61091 71 4 0.82251 283 5 0.76524 139 5 0.62955 118 5 0.55259 216 5 0.63978 85 4 0.73317 157 5 0.79002 75 4 0.37322 158 4 0.72134 74 4 0.64359 131 4 0.80000 60 4 0.36827 94 4 0.35744 253 4 0.36556 87 5 0.61462 231 5 0.72917 32 3 0.22078 123 4 0.85194 166 5 0.73191 90 5 0.62006 132 5 0.65310 177 5 0.43193 81 5 0.51075 57 4 0.70884 130 5 0.68264 225 5 0.40034 188 5 0.79444 236 5 0.0305594 186 5 0.0066667 92 5 0.0023529 241 3 0.025000 38 3 0.037553 148 5 0.040543 187 5 0.55381 329 5 0.41087 205 5 0.64240 257 5 0.51191 207 4 0.54710 280 5 0.71775 0.49096 0.66936 0.72391 0.57001 0.84052 0.73443 0.59957 0.54619 0.78840 0.71922 0.73389 0.369418 0.65731 0.63266 0.83734 0.36358 0.32140 0.30387 0.55234 0.83634 0.21392 0.88234 0.77054 0.60014 0.60095 0.42965 0.74859 0.66499 0.61752 0.27970 0.79834 0.0340242 0.00870561 0.00307257 0.0352234 0.037077 0.047890 0.504792 0.38764 0.575250 0.38667 0.51796 4 0.61852 0.63225 -0.01007300 5 0.70044 0.54700 0.1534397 0.90733012 4.8363e-01 insignificant 1.00000 1.000000 insignificant 0.8381675 0.42814388 insignificant 1 1.00000 insignificant 0.0130236 0.839242 lowCoverage 1.000 lowCoverage 0.61840 0.0246637 0.587984 5 0.64052 0.0243850 0.6161371 1.5623e-37 1.0000e+00 hypermethylated 1.9529e-35 1.0000e+00 hypermethylated 3.0903e-14 1.0000e+00 hypermethylated 5.2958e-12 1.0000e+00 hypermethylated 0.6005694 1.3475e-13 lowCoverage 1.6844e-11 lowCoverage 0.61840 0.48435 1.2962e-01 5 0.64052 0.53015 0.1103701 6.3165e-03 9.9797e-01 weaklyHypermeth 1.5791e-01 1.000000 insignificant 1.0797e-02 0.9839278 weaklyHypermeth 3.1755e-01 1.00000 insignificant 0.0911323 9.7806e-02 lowCoverage 1.00000000 lowCoverage 0.63303 0.0246637 0.61069926 5 0.65639 0.0243850 0.6320095 1.7618e-24 1.0000e+00 hypermethylated 1.1745e-22 1.0000e+00 hypermethylated 9.2670e-12 1.0000e+00 hypermethylated 1.8534e-09 1.00000000 hypermethylated 0.587546 2.3131e-07 lowCoverage 1.9276e-05 lowCoverage 0.63303 0.48435 0.1436041 5 0.65639 0.53015 0.1262425 1.5859e-02 9.9680e-01 weaklyHypermeth 3.0529e-01 1.000000 insignificant 1.6493e-02 0.99178024 weaklyHypermeth 5.1540e-01 1.00000 insignificant 0.0781088 2.4948e-01 lowCoverage 1.000000 lowCoverage 0.0246637 0.48435 -0.4608627 5 0.0243850 0.53015 -0.505767 1.0000e+00 6.8776e-24 hypomethylated 1.0000e+00 2.2925e-21 hypomethylated 1.0000e+00 9.5432e-09 hypomethylated 1.0000e+00 3.1811e-06 hypomethylated -0.509437 1.2330e-04 lowCoverage 1.7614e-02 lowCoverage chr15 76819626 76820626 133861 CHRNB4 ENSG00000117971 0.61779 705 8 0.51570 344 8 0.42632 180 8 0.66465 524 7 0.55210 189 9 0.60720 799 8 0.62964 258 8 0.53506 215 7 0.62288 180 8 0.60346 131 8 0.59296 463 10 0.71789 106 7 0.72109 109 6 0.72500 76 6 0.57505 159 8 0.50803 95 6 0.88889 25 2 0.55514 789 8 0.68233 527 8 0.59136 599 8 0.65608 108 8 0.48485 33 2 0.61194 268 10 0.58913 244 8 0.70707 79 4 0.64618 314 6 0.54922 192 7 0.47229 135 8 0.57656 442 8 0.72040 347 6 0.52753 458 8 0.52048 333 7 0.1795794 363 8 0.2064616 342 8 0.5760625 482 7 0.180952 38 2 0.347684 249 7 0.038943 538 8 0.60281 838 8 0.61296 519 8 0.45953 438 7 0.59936 1320 7 0.50667 689 7 0.46453 0.41960 0.44646 0.55054 0.40762 0.47400 0.48380 0.41193 0.54487 0.57362 0.51559 0.63525 0.673239 0.60984 0.53425 0.52995 0.51118 0.52328 0.64074 0.57996 0.51344 0.47815 0.43788 0.50804 0.45476 0.51551 0.48393 0.51746 0.50335 0.49616 0.47637 0.48226 0.0853748 0.17605648 0.50218217 0.2393838 0.210786 0.024865 0.545108 0.51355 0.455924 0.55480 0.57587 5 0.40402 0.37242 0.04060346 8 0.60795 0.59727 0.0106782 0.00637450 6.3314e-02 weaklyHypermeth 1.00000 1.000000 insignificant 0.0232578 0.31340181 weaklyHypermeth 1 1.00000 insignificant 0.0281489 0.395247 insignificant 1.000 insignificant 0.40386 0.2256461 0.226364 8 0.56628 0.3398784 0.2264065 3.5699e-21 1.0000e+00 hypermethylated 1.6227e-19 1.0000e+00 hypermethylated 2.7007e-11 1.0000e+00 hypermethylated 2.4552e-09 1.0000e+00 hypermethylated 0.3616790 3.9264e-03 weaklyHypermeth 9.4412e-02 weaklyHypermeth 0.40439 0.34306 -2.4260e-03 7 0.60245 0.61754 -0.0150888 7.0526e-01 2.9226e-01 insignificant 1.0000e+00 1.000000 insignificant 6.2830e-01 0.5059514 insignificant 1.0000e+00 1.00000 insignificant 0.0603583 1.4852e-01 insignificant 1.00000000 insignificant 0.37233 0.2252611 0.17477553 8 0.60612 0.2798673 0.3262491 1.6716e-14 9.9725e-01 weaklyHypermeth 6.6865e-13 1.0000e+00 weaklyHypermeth 4.3181e-10 1.0000e+00 weaklyHypermeth 3.9256e-08 1.00000000 weaklyHypermeth 0.333530 5.6488e-03 weaklyHypermeth 1.2838e-01 insignificant 0.37023 0.34306 -0.0466601 7 0.59266 0.61754 -0.0248795 7.1866e-01 1.6394e-03 weaklyHypometh 1.0000e+00 0.546473 insignificant 7.5209e-01 0.03517122 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.0322094 4.2936e-01 insignificant 1.000000 insignificant 0.2249377 0.34306 -0.2460171 7 0.2976156 0.61754 -0.319925 1.0000e+00 2.3146e-06 hypomethylated 1.0000e+00 6.2555e-05 hypomethylated 1.0000e+00 1.8316e-06 hypomethylated 1.0000e+00 2.0351e-04 hypomethylated -0.301321 8.7148e-03 weaklyHypometh 1.9806e-01 insignificant chr15 76819933 76820933 133862 CHRNB4 ENSG00000117971 0.65253 706 8 0.51570 344 8 0.42632 180 8 0.69514 526 7 0.55210 189 9 0.64291 800 8 0.62964 258 8 0.53506 215 7 0.62288 180 8 0.60346 131 8 0.59296 463 10 0.71789 106 7 0.72109 109 6 0.72500 76 6 0.57505 159 8 0.50803 95 6 0.88889 25 2 0.54595 791 8 0.68233 527 8 0.59136 599 8 0.65608 108 8 0.48485 33 2 0.61194 268 10 0.58913 244 8 0.70707 79 4 0.67566 315 6 0.54922 192 7 0.47229 135 8 0.57656 442 8 0.74836 348 6 0.56690 461 8 0.52048 333 7 0.1795794 363 8 0.2064616 342 8 0.5760625 482 7 0.180952 38 2 0.347684 249 7 0.035049 541 8 0.54253 839 8 0.62666 523 8 0.40209 446 8 0.53277 1323 7 0.56834 690 7 0.46453 0.41960 0.44646 0.55054 0.40762 0.47400 0.48380 0.41193 0.54487 0.57362 0.51559 0.63525 0.673239 0.60984 0.53425 0.52995 0.51118 0.52328 0.64074 0.57996 0.51344 0.47815 0.43788 0.50804 0.45476 0.51551 0.48393 0.51746 0.50335 0.49616 0.47637 0.48226 0.0853748 0.17605648 0.50218217 0.2393838 0.210786 0.024865 0.545108 0.51355 0.455924 0.55480 0.57587 5 0.40423 0.37348 0.04036623 8 0.61888 0.62825 -0.0093740 0.01121647 5.6861e-02 weaklyHypermeth 1.00000 1.000000 insignificant 0.0403469 0.28613340 weaklyHypermeth 1 1.00000 insignificant 0.0246684 0.471942 insignificant 1.000 insignificant 0.40408 0.2253102 0.226746 8 0.58042 0.3137339 0.2666829 5.2714e-21 1.0000e+00 hypermethylated 2.2919e-19 1.0000e+00 hypermethylated 4.6823e-11 1.0000e+00 hypermethylated 3.9019e-09 1.0000e+00 hypermethylated 0.3669157 3.7340e-03 weaklyHypermeth 9.3350e-02 weaklyHypermeth 0.40461 0.34258 -2.0923e-03 7 0.61721 0.57932 0.0378907 5.0467e-01 4.0130e-01 insignificant 1.0000e+00 1.000000 insignificant 5.4558e-01 0.6189312 insignificant 1.0000e+00 1.00000 insignificant 0.0867356 8.3344e-02 insignificant 1.00000000 insignificant 0.37339 0.2249255 0.17617517 8 0.63894 0.2565450 0.3823950 8.8882e-14 9.9912e-01 weaklyHypermeth 3.0649e-12 1.0000e+00 weaklyHypermeth 3.6500e-10 1.0000e+00 weaklyHypermeth 3.6500e-08 1.00000000 weaklyHypermeth 0.342247 5.0310e-03 weaklyHypermeth 1.1700e-01 insignificant 0.37130 0.34258 -0.0452480 7 0.63339 0.57932 0.0540790 2.7464e-01 3.9666e-03 weaklyHypometh 1.0000e+00 0.854024 insignificant 4.4064e-01 0.06552260 insignificant 1.0000e+00 1.00000 insignificant 0.0620672 2.0174e-01 insignificant 1.000000 insignificant 0.2246016 0.34258 -0.2459994 7 0.2678540 0.57932 -0.311462 1.0000e+00 3.5020e-06 hypomethylated 1.0000e+00 9.2157e-05 hypomethylated 1.0000e+00 3.1020e-06 hypomethylated 1.0000e+00 3.1020e-04 hypomethylated -0.280180 1.2516e-02 weaklyHypometh 2.5543e-01 insignificant chr15 77837493 77838493 133881 ENSG00000213527 0.92837 178 5 0.82620 85 5 0.77853 122 5 0.92000 47 5 0.94795 44 4 0.97842 174 5 0.87264 126 5 0.91167 100 5 0.89539 110 5 0.91297 75 5 0.89919 125 5 0.89563 64 5 0.93950 125 5 NA 0 0 0.92177 88 5 0.89919 110 5 0.90876 100 5 0.90844 82 5 0.91819 73 5 0.95477 185 5 0.87714 67 5 0.69524 47 3 0.91631 155 5 0.90323 49 5 0.48000 17 3 0.89847 110 5 0.92517 107 5 0.93182 39 5 0.88904 78 5 0.91765 127 5 0.95087 128 5 0.92196 377 5 0.8063074 91 5 0.8296998 123 5 0.5280098 114 5 0.838333 53 5 0.885776 80 5 0.672554 71 5 0.85174 148 5 0.89124 163 5 0.83375 72 5 0.80157 120 5 0.80844 137 5 0.93095 0.82719 0.79117 0.91718 0.94738 0.98262 0.88088 0.90121 0.89626 0.90472 0.90324 0.88549 0.948244 NA 0.92781 0.90687 0.91044 0.91527 0.89608 0.94606 0.88909 0.72067 0.91740 0.91735 0.51237 0.90000 0.92570 0.93506 0.90256 0.90538 0.94759 0.92453 0.8033697 0.84203473 0.56137440 0.8510739 0.883723 0.604065 0.846566 0.88361 0.845429 0.77983 0.81887 5 0.91108 0.90930 0.00050855 5 0.90943 0.90703 0.0024052 0.63437529 7.3629e-01 insignificant 1.00000 1.000000 insignificant 0.3704257 0.88411103 insignificant 1 1.00000 insignificant 0.0472790 0.266192 lowCoverage 1.000 lowCoverage 0.91108 0.7406015 0.171162 5 0.90943 0.7610272 0.1484041 4.6370e-10 9.8470e-01 weaklyHypermeth 8.7491e-09 1.0000e+00 weaklyHypermeth 7.5155e-04 9.5801e-01 weaklyHypermeth 1.3185e-02 1.0000e+00 weaklyHypermeth 0.1460750 4.4347e-02 lowCoverage 6.1593e-01 lowCoverage 0.91108 0.83437 7.2786e-02 5 0.90943 0.84294 0.0664892 3.8908e-06 9.3651e-01 weaklyHypermeth 2.4317e-04 1.000000 weaklyHypermeth 6.8518e-04 0.8327415 weaklyHypermeth 3.1145e-02 1.00000 weaklyHypermeth 0.0688395 7.7226e-03 lowCoverage 0.41920847 lowCoverage 0.90930 0.7406015 0.17132946 5 0.90703 0.7610272 0.1459989 9.1093e-07 9.5639e-01 weaklyHypermeth 1.4692e-05 1.0000e+00 weaklyHypermeth 1.4940e-02 8.7046e-01 weaklyHypermeth 1.8220e-01 1.00000000 insignificant 0.098796 1.7350e-01 lowCoverage 1.0000e+00 lowCoverage 0.90930 0.83437 0.0729383 5 0.90703 0.84294 0.0640840 2.1167e-04 9.1246e-01 weaklyHypermeth 7.5595e-03 1.000000 weaklyHypermeth 2.9243e-02 0.61021237 weaklyHypermeth 7.3108e-01 1.00000 insignificant 0.0215604 6.2000e-01 lowCoverage 1.000000 lowCoverage 0.7406015 0.83437 -0.0959565 5 0.7610272 0.84294 -0.081915 9.4886e-01 6.6475e-02 insignificant 1.0000e+00 6.3309e-01 insignificant 7.9274e-01 4.8751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.077236 2.2708e-01 insignificant 1.0000e+00 insignificant chr15 79957344 79958344 133915 ENSG00000222992 0.74205 176 6 0.67982 81 6 0.59051 94 6 0.68655 108 6 0.72540 48 6 0.66801 252 6 0.73148 88 6 0.79482 79 6 0.74315 70 6 0.65282 72 6 0.69777 173 6 0.53535 82 6 0.69935 128 6 NA 0 0 0.66154 79 6 0.76543 83 6 0.79207 85 6 0.75816 130 6 0.75635 177 6 0.73925 297 6 0.68981 34 3 0.87879 51 6 0.63059 114 6 0.77315 42 6 0.73611 45 3 0.69907 120 6 0.80326 69 6 0.76035 52 6 0.76019 82 6 0.73337 155 6 0.72836 173 6 0.68540 321 6 0.6362410 80 5 0.5662944 122 6 0.6068949 157 6 0.686169 73 6 0.738426 72 6 0.591859 183 6 0.78206 223 6 0.71511 174 6 0.77001 147 6 0.74246 178 6 0.80820 140 6 0.75173 0.66170 0.62077 0.68799 0.74462 0.65082 0.72318 0.79999 0.70890 0.64748 0.69715 0.51538 0.735091 NA 0.65274 0.76895 0.77555 0.76085 0.76032 0.74337 0.78460 0.84326 0.63883 0.74737 0.73060 0.69159 0.78692 0.73322 0.74350 0.73569 0.71802 0.69214 0.6219195 0.55935296 0.61642493 0.6249136 0.750060 0.574435 0.793626 0.71057 0.764628 0.76433 0.79817 4 0.71546 0.71860 -0.00654039 6 0.71059 0.71712 -0.0065257 0.85133597 5.4241e-01 insignificant 1.00000 1.000000 insignificant 0.9877580 0.16782720 insignificant 1 1.00000 insignificant -0.0335628 0.171621 insignificant 1.000 insignificant 0.71546 0.6171761 0.093564 6 0.71059 0.6227761 0.0878163 3.5651e-05 9.9996e-01 weaklyHypermeth 4.4013e-04 1.0000e+00 weaklyHypermeth 6.5446e-03 9.9908e-01 weaklyHypermeth 9.2178e-02 1.0000e+00 weaklyHypermeth 0.0686615 5.0908e-02 insignificant 6.8795e-01 insignificant 0.71546 0.76798 -5.5081e-02 6 0.71059 0.76410 -0.0535091 9.9850e-01 1.9678e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9897e-01 0.0372909 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0572595 2.3449e-02 weaklyHypometh 0.65135064 insignificant 0.71860 0.6171761 0.10107305 6 0.71712 0.6227761 0.0943420 2.5240e-05 9.9991e-01 weaklyHypermeth 3.6058e-04 1.0000e+00 weaklyHypermeth 2.3241e-03 9.9991e-01 weaklyHypermeth 3.5783e-02 1.00000000 weaklyHypermeth 0.102224 9.6079e-03 weaklyHypermeth 1.9216e-01 insignificant 0.71860 0.76798 -0.0505523 6 0.71712 0.76410 -0.0469834 9.9466e-01 3.0505e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.5116e-01 0.27538561 insignificant 1.0000e+00 1.00000 insignificant -0.0236967 3.4917e-01 insignificant 1.000000 insignificant 0.6171761 0.76798 -0.1516836 6 0.6227761 0.76410 -0.141325 1.0000e+00 9.1388e-07 weaklyHypometh 1.0000e+00 2.8559e-05 weaklyHypometh 1.0000e+00 1.7755e-04 weaklyHypometh 1.0000e+00 7.1477e-03 weaklyHypometh -0.125921 3.4339e-03 weaklyHypometh 1.1077e-01 insignificant chr15 80401079 80402079 133930 FAM154B ENSG00000188659 0.88902 206 6 0.80225 167 6 0.88661 133 6 0.95635 217 6 0.92405 63 4 0.84794 219 6 0.68529 114 4 0.89433 156 6 0.94653 191 6 0.83395 183 6 0.90668 153 6 0.71753 127 6 0.77442 226 6 0.73336 142 6 0.78699 193 6 0.77970 117 6 0.89007 36 4 0.94625 333 6 0.81007 143 6 0.89805 159 6 0.87662 50 6 0.90307 117 6 0.86622 133 6 0.84174 96 6 0.94617 92 6 0.92995 184 6 0.61002 123 6 0.75241 139 6 0.87679 182 6 0.80285 230 6 0.82561 159 6 0.94318 203 6 0.6713108 111 6 0.5404762 102 6 0.7169312 37 3 0.866667 19 3 0.756614 145 6 0.742735 164 6 0.89700 183 6 0.96682 210 6 0.92840 227 6 0.94591 187 6 0.91161 159 6 0.90641 0.85112 0.88660 0.96078 0.89665 0.88012 0.89802 0.91144 0.92076 0.93288 0.89059 0.86311 0.922456 0.86735 0.89340 0.81848 0.84094 0.94218 0.92392 0.85816 0.82399 0.86135 0.86416 0.82161 0.92892 0.93878 0.85388 0.95715 0.87580 0.92849 0.96528 0.94012 0.6694257 0.55149137 0.68285350 0.7521777 0.771169 0.727695 0.910984 0.96894 0.939023 0.95063 0.91591 4 0.90299 0.90164 -0.00259369 6 0.79445 0.82339 -0.0289415 0.90868202 5.5754e-01 insignificant 1.00000 1.000000 insignificant 0.9263800 0.54224722 insignificant 1 1.00000 insignificant -0.0024130 0.942035 insignificant 1.000 insignificant 0.90483 0.6799308 0.219687 6 0.85244 0.7640816 0.0883602 5.7266e-15 9.9150e-01 hypermethylated 1.5477e-13 1.0000e+00 hypermethylated 1.3100e-04 9.9590e-01 hypermethylated 2.7873e-03 1.0000e+00 hypermethylated 0.1296834 3.0219e-02 weaklyHypermeth 4.5203e-01 insignificant 0.90555 0.94203 -3.3884e-02 6 0.89259 0.94272 -0.0501342 9.9787e-01 1.3972e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9836e-01 0.0174769 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0844758 9.6063e-04 weaklyHypometh 0.10673643 insignificant 0.90252 0.6799308 0.21816380 6 0.84174 0.7640816 0.0776621 4.9594e-10 9.8630e-01 hypermethylated 1.1808e-08 1.0000e+00 hypermethylated 1.0354e-04 9.9057e-01 hypermethylated 2.4384e-03 1.00000000 hypermethylated 0.132096 3.1006e-02 weaklyHypermeth 4.7017e-01 insignificant 0.90479 0.94203 -0.0324855 6 0.87866 0.94272 -0.0640613 9.5949e-01 4.8080e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.7397e-01 0.08573797 insignificant 1.0000e+00 1.00000 insignificant -0.0820628 1.5866e-02 weaklyHypometh 0.793295 insignificant 0.6782609 0.94203 -0.2585508 6 0.7303789 0.94272 -0.212342 1.0000e+00 1.0674e-06 hypomethylated 1.0000e+00 3.2347e-05 hypomethylated 1.0000e+00 2.6779e-04 hypomethylated 1.0000e+00 8.3683e-03 hypomethylated -0.214159 3.6988e-03 weaklyHypometh 1.1559e-01 insignificant chr15 80410305 80411305 133932 FAM154B ENSG00000188659 0.83484 192 10 0.80414 97 8 0.81912 148 9 0.81520 242 8 0.91988 118 8 0.84998 274 10 0.93801 66 7 0.80471 111 8 0.78443 114 8 0.90638 114 8 0.74821 219 8 0.66299 84 6 0.97127 150 10 0.96849 106 8 0.83053 161 8 0.77194 87 7 0.60000 12 1 0.74222 325 8 0.94655 165 6 0.85206 164 9 0.61317 95 9 0.96448 100 6 0.83646 77 7 0.81667 61 4 0.93750 77 6 0.79821 95 6 0.71158 148 9 0.90757 74 5 0.95028 153 6 0.95714 98 8 0.88056 119 6 0.85059 166 8 0.6931475 96 6 0.7929422 81 6 0.6105538 113 8 0.760000 31 1 0.626620 71 7 0.819210 134 8 0.94340 219 8 0.95239 132 6 0.92569 180 7 0.90130 182 8 0.86497 179 6 0.86448 0.93148 0.81543 0.90560 0.89222 0.92853 0.88226 0.87806 0.83996 0.91114 0.91124 0.90703 0.944272 0.95282 0.90937 0.85103 0.95499 0.87452 0.90063 0.95223 0.90820 0.93607 0.92187 0.90107 0.96925 0.94763 0.82410 0.83163 0.92993 0.94500 0.93004 0.93934 0.7693371 0.73166645 0.64726239 0.8026738 0.752249 0.821034 0.915204 0.91456 0.908056 0.90209 0.92842 5 0.89386 0.90420 -0.01504533 8 0.70340 0.69902 0.0043761 0.87160853 2.7388e-01 insignificant 1.00000 1.000000 insignificant 0.9748102 0.22679154 insignificant 1 1.00000 insignificant -0.0234674 0.541346 insignificant 1.000 insignificant 0.89534 0.7243346 0.165820 6 0.77897 0.6144500 0.1645155 3.4089e-16 9.9960e-01 weaklyHypermeth 1.0330e-14 1.0000e+00 weaklyHypermeth 5.2688e-04 9.8963e-01 weaklyHypermeth 9.5797e-03 1.0000e+00 weaklyHypermeth 0.1114695 2.5509e-02 weaklyHypermeth 4.0490e-01 insignificant 0.89863 0.91031 -1.1388e-02 6 0.81298 0.85164 -0.0386588 9.4211e-01 8.8847e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7741e-01 0.1307650 insignificant 1.0000e+00 1.00000 insignificant -0.0890023 3.7061e-03 weaklyHypometh 0.23162923 insignificant 0.90548 0.7243346 0.17927039 6 0.75997 0.6144500 0.1455212 1.1439e-08 9.9996e-01 weaklyHypermeth 2.3407e-07 1.0000e+00 weaklyHypermeth 2.1028e-03 9.9940e-01 weaklyHypermeth 3.3379e-02 1.00000000 weaklyHypermeth 0.134937 1.4115e-02 weaklyHypermeth 2.6139e-01 insignificant 0.91193 0.91031 0.0035110 6 0.86239 0.85164 0.0107501 8.0397e-01 1.8877e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8977e-01 0.41809010 insignificant 1.0000e+00 1.00000 insignificant -0.0655349 7.8481e-02 insignificant 1.000000 insignificant 0.7330754 0.91134 -0.1719712 6 0.7123400 0.93681 -0.224467 1.0000e+00 1.7301e-07 weaklyHypometh 1.0000e+00 7.5220e-06 weaklyHypometh 9.9995e-01 3.6514e-04 weaklyHypometh 1.0000e+00 1.0433e-02 weaklyHypometh -0.200472 1.4448e-03 weaklyHypometh 6.5675e-02 weaklyHypometh chr15 80717632 80718632 133949 RPS17 ENSG00000184779 0.91143 259 11 0.80912 232 11 0.87758 161 10 0.88197 261 9 0.84221 145 12 0.73403 317 10 0.81681 90 8 0.74761 99 9 0.85543 101 8 0.83452 120 9 0.88973 248 10 0.86565 124 9 0.87276 217 12 0.95279 143 10 0.74999 234 12 0.76958 104 10 0.94444 16 2 0.82724 395 9 0.84481 284 9 0.78972 219 8 0.92689 88 9 0.74221 147 9 0.90490 126 9 0.67708 82 9 0.82071 133 8 0.91642 171 9 0.81250 140 12 0.73479 111 11 0.90143 223 11 0.86727 299 10 0.77731 165 10 0.85439 241 10 0.7579712 168 10 0.8275974 104 9 0.6629149 112 8 0.801122 68 5 0.694133 174 8 0.712553 235 10 0.84788 229 10 0.76472 202 11 0.83759 191 9 0.76485 218 8 0.75463 233 9 0.90916 0.82405 0.82483 0.88084 0.87155 0.90577 0.88208 0.89575 0.88555 0.93198 0.91490 0.91397 0.974193 0.94009 0.89330 0.80755 0.90459 0.89995 0.91014 0.91092 0.95512 0.88051 0.90645 0.85047 0.89650 0.92526 0.91746 0.88108 0.94765 0.96255 0.89165 0.91941 0.7525372 0.81198081 0.66529609 0.7410009 0.759515 0.730549 0.944590 0.93864 0.902764 0.88211 0.90214 7 0.88220 0.88162 -0.01172227 10 0.78964 0.75480 0.0348454 0.72423227 2.8626e-01 insignificant 1.00000 1.000000 insignificant 0.7767171 0.29074428 insignificant 1 1.00000 insignificant 0.0128787 0.642469 insignificant 1.000 insignificant 0.88375 0.7166086 0.159776 10 0.84462 0.6815901 0.1630337 2.0135e-12 9.8078e-01 weaklyHypermeth 4.3773e-11 1.0000e+00 weaklyHypermeth 8.1500e-04 9.7587e-01 weaklyHypermeth 1.4052e-02 1.0000e+00 weaklyHypermeth 0.0981566 1.0489e-02 weaklyHypermeth 2.0568e-01 insignificant 0.88348 0.88816 7.1073e-03 9 0.82081 0.74748 0.0733342 5.8819e-02 2.6453e-01 insignificant 1.0000e+00 1.000000 insignificant 1.2070e-01 0.1165910 insignificant 1.0000e+00 1.00000 insignificant 0.0469358 8.9262e-02 insignificant 1.00000000 insignificant 0.88287 0.7166086 0.17281125 10 0.80310 0.6815901 0.1215098 1.5785e-09 9.3507e-01 weaklyHypermeth 3.5876e-08 1.0000e+00 weaklyHypermeth 4.0508e-04 8.9846e-01 weaklyHypermeth 8.0655e-03 1.00000000 weaklyHypermeth 0.085278 3.1032e-02 weaklyHypermeth 4.7017e-01 insignificant 0.88281 0.88816 0.0212047 9 0.79120 0.74748 0.0437151 1.0840e-02 2.8584e-01 weaklyHypermeth 2.4088e-01 1.000000 insignificant 6.3495e-02 0.48240780 insignificant 1.0000e+00 1.00000 insignificant 0.0340571 2.8984e-01 insignificant 1.000000 insignificant 0.7171129 0.88982 -0.1439816 9 0.6955586 0.80498 -0.109420 9.8681e-01 1.1234e-05 weaklyHypometh 1.0000e+00 2.7401e-04 weaklyHypometh 8.6821e-01 6.1742e-03 weaklyHypometh 1.0000e+00 1.1326e-01 insignificant -0.051221 1.5525e-01 insignificant 1.0000e+00 insignificant chr15 86188030 86189030 134178 ENSG00000219654 0.867216 231 4 0.751009 100 5 0.637737 109 5 0.93685 165 4 0.92113 69 5 0.875308 346 5 0.742136 84 5 0.878017 134 5 0.743801 122 5 0.835462 70 5 0.920400 293 5 0.802867 49 2 0.736114 126 5 0.83810 78 4 0.692490 117 5 0.90625 27 2 0.74357 532 5 0.73039 268 4 0.814822 266 5 0.84358 335 4 0.79583 57 4 0.462963 29 2 0.882626 131 4 0.911823 84 4 0.79167 19 1 0.905193 174 5 0.85661 127 5 0.797464 80 4 0.72542 190 5 0.7144228 172 5 0.725843 149 4 0.851931 332 5 0.541138 151 5 0.570635 117 5 0.48009 78 3 0.38889 6 0 0.67438 100 5 0.82353 186 5 0.684341 285 4 0.75074 289 4 0.680666 216 4 0.94983 320 4 0.848469 230 4 0.909047 0.813266 0.69507 0.94189 0.942631 0.895787 0.866925 0.889014 0.895370 0.898815 0.940775 0.887231 0.799811 0.85085 0.849094 0.917309 0.796695 0.90194 0.824183 0.928597 0.95448 0.779454 0.921340 0.948505 0.842040 0.946417 0.877824 0.923929 0.92277 0.9187577 0.920793 0.881298 0.729918 0.822370 0.935501 0.62981 0.82936 0.91465 0.845339 0.93713 0.822267 0.960391 0.819506 2 0.893212 0.912565 -0.03227234 5 0.775018 0.73858 0.0364417 0.71508 0.061744 insignificant 1 1 insignificant 0.865696 2.3835e-02 weaklyHypometh 1 1.000000 insignificant 0.025713 0.53070 lowCoverage 1 lowCoverage 0.893212 0.78527 0.065617 5 0.775018 0.60202 0.172993 1.7421e-03 9.9872e-01 weaklyHypermeth 2.7652e-02 1.0000e+00 weaklyHypermeth 1.6445e-02 9.9943e-01 weaklyHypermeth 0.31028340 1.0000e+00 insignificant 0.231085 1.2214e-02 lowCoverage 0.4071471 lowCoverage 0.893436 0.93433 -0.016476 4 0.830021 0.70430 0.125721 4.9982e-03 4.1918e-01 lowCoverage 2.2719e-01 1.0000e+00 lowCoverage 1.7903e-01 3.4781e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.028053 6.3137e-01 lowCoverage 1.000000 lowCoverage 0.912565 0.78527 0.097441 5 0.73858 0.60202 0.136551 9.3948e-06 9.9996e-01 weaklyHypermeth 0.00027632 1.0000e+00 weaklyHypermeth 0.00444762 9.9997e-01 weaklyHypermeth 0.105896 1.0000e+00 insignificant 0.205372 2.0004e-02 lowCoverage 0.5883512 lowCoverage 0.916721 0.93433 0.012445 4 0.88629 0.70430 0.18199074 7.0257e-05 7.6959e-01 lowCoverage 7.8064e-03 1.0000e+00 lowCoverage 2.3266e-02 9.8396e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.0023407 9.7111e-01 lowCoverage 1.0000000 lowCoverage 0.79398 0.93433 -0.057621 4 0.72243 0.70430 0.018130 5.5890e-01 0.0097296 lowCoverage 1.0000e+00 0.262961 lowCoverage 5.2291e-01 0.052067 lowCoverage 1.00000000 1.00000 lowCoverage -0.2030318 3.3470e-02 lowCoverage 0.9297345 lowCoverage chr15 86296845 86297845 134191 ENSG00000219654 0.932767 684 18 0.916462 343 18 0.825655 376 15 0.94029 460 18 0.96528 180 12 0.889932 674 18 0.913104 260 12 0.948016 371 18 0.878674 278 14 0.978950 335 14 0.891475 597 18 0.843137 122 9 0.943576 471 15 0.96175 153 13 0.988720 365 15 0.85298 137 9 0.76543 69 5 0.88629 790 18 0.956597 463 15 0.96086 578 18 0.89680 148 9 0.841375 298 15 0.846475 329 17 0.779446 125 9 0.92741 183 15 0.969652 574 18 0.91476 392 18 0.785863 151 8 0.94525 500 13 0.9671387 571 18 0.965229 591 18 0.951032 671 18 0.919489 349 18 0.872486 474 15 0.89340 313 12 0.84363 70 4 0.76802 246 16 0.93190 670 18 0.974209 547 15 0.96359 562 18 0.981956 553 15 0.96634 505 14 0.874594 593 18 0.910268 0.930599 0.85891 0.92382 0.971133 0.944221 0.914278 0.928715 0.940869 0.985142 0.945806 0.965323 0.953955 0.89801 0.980625 0.913982 0.893851 0.93344 0.950204 0.953671 0.94961 0.942960 0.910770 0.770154 0.935357 0.969726 0.913840 0.932977 0.94664 0.9607158 0.963167 0.953107 0.893178 0.845743 0.866458 0.91314 0.88132 0.92282 0.967316 0.95124 0.963986 0.956264 0.949600 4 0.937581 0.939775 -0.00357004 18 0.891183 0.80072 0.0904608 0.70229 0.330027 insignificant 1 1 insignificant 0.617362 6.9663e-01 insignificant 1 1.000000 insignificant 0.012795 0.59767 insignificant 1 insignificant 0.937882 0.87088 0.066298 18 0.893495 0.79752 0.095978 3.7515e-04 8.2028e-01 weaklyHypermeth 6.4680e-03 1.0000e+00 weaklyHypermeth 3.7146e-01 6.8776e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.040511 1.8086e-01 insignificant 1.0000000 insignificant 0.937866 0.95326 -0.016769 18 0.922697 0.90713 0.015563 9.7930e-01 5.3207e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6557e-01 2.4161e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.040141 1.2673e-01 insignificant 1.000000 insignificant 0.941189 0.87088 0.069038 18 0.86069 0.79752 0.063172 2.2573e-02 9.8297e-01 weaklyHypermeth 0.29700680 1.0000e+00 insignificant 0.60851112 8.7113e-01 insignificant 1.000000 1.0000e+00 insignificant 0.027716 3.9844e-01 insignificant 1.0000000 insignificant 0.941189 0.95326 -0.011533 18 0.90618 0.90713 -0.00095926 4.4510e-01 2.1516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4383e-01 3.1436e-01 insignificant 1.00000000 1.00000000 insignificant -0.0529364 8.3913e-02 insignificant 1.0000000 insignificant 0.87323 0.95361 -0.081006 18 0.89340 0.95753 -0.064131 9.0063e-01 0.0278570 weaklyHypometh 1.0000e+00 0.605586 insignificant 8.0033e-01 0.171261 insignificant 1.00000000 1.00000 insignificant -0.0806521 3.0342e-02 weaklyHypometh 0.8669028 insignificant chr15 87297708 87298708 134265 MFGE8 ENSG00000140545 0.801656 343 6 0.804328 244 6 0.885509 92 6 0.83022 332 6 0.71800 82 6 0.830792 301 6 0.820307 92 6 0.826203 104 6 0.738272 65 6 0.964286 42 4 0.753448 130 6 0.892857 21 1 0.809174 82 6 0.91785 69 6 0.902778 73 4 0.91667 64 6 0.33333 3 0 0.64606 73 3 0.903374 224 6 0.82643 212 6 0.87571 53 4 0.833333 16 1 0.708777 143 6 0.720238 47 4 0.86190 97 6 0.874227 146 6 0.81628 58 6 0.611111 45 4 0.72410 262 6 0.8650078 357 6 0.803510 401 6 0.805895 271 6 0.769841 216 6 0.793532 135 6 0.89996 248 6 0.72222 37 3 0.67470 171 6 0.80109 198 6 0.767681 298 6 0.72691 186 6 0.785141 233 6 0.86235 121 6 0.450183 80 4 0.809838 0.772144 0.86292 0.81006 0.704366 0.806414 0.786232 0.861184 0.752798 0.920229 0.743141 0.892075 0.765902 0.87622 0.873092 0.945255 0.479363 0.67810 0.894396 0.795938 0.81810 0.762774 0.823243 0.769899 0.834202 0.872246 0.816838 0.659367 0.84588 0.8696787 0.817596 0.789378 0.640042 0.645970 0.933071 0.55474 0.64193 0.73814 0.679586 0.62008 0.688636 0.790975 0.446731 2 0.847810 0.877508 -0.00890518 6 0.831188 0.83496 -0.0037753 0.52408 0.458105 insignificant 1 1 insignificant 0.085244 7.3627e-01 insignificant 1 1.000000 insignificant 0.014403 0.71205 insignificant 1 insignificant 0.847810 0.83781 0.048784 6 0.831188 0.78864 0.042549 8.2007e-03 4.1553e-02 weaklyHypermeth 1.1550e-01 1.0000e+00 insignificant 1.8034e-01 2.1395e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.029186 5.1328e-01 insignificant 1.0000000 insignificant 0.847810 0.81699 0.063927 6 0.831188 0.77795 0.053241 3.1512e-04 7.7823e-01 weaklyHypermeth 1.8536e-02 1.0000e+00 weaklyHypermeth 1.5656e-02 9.4856e-01 weaklyHypermeth 8.0545e-01 1.00000000 insignificant 0.087624 3.0059e-01 insignificant 1.000000 insignificant 0.877508 0.83781 0.033295 6 0.83496 0.78864 0.046324 1.9517e-02 1.9052e-01 weaklyHypermeth 0.26023307 1.0000e+00 insignificant 0.40718497 9.5071e-02 insignificant 1.000000 1.0000e+00 insignificant 0.014783 7.1528e-01 insignificant 1.0000000 insignificant 0.877508 0.81699 0.060836 6 0.83496 0.77795 0.05701654 3.3366e-04 5.7683e-01 weaklyHypermeth 2.7547e-02 1.0000e+00 weaklyHypermeth 8.8220e-03 5.8466e-01 weaklyHypermeth 0.80200443 1.00000000 insignificant 0.0732214 3.7147e-01 insignificant 1.0000000 insignificant 0.83781 0.81699 0.031970 6 0.78864 0.77795 0.010692 8.0928e-02 0.8484255 insignificant 1.0000e+00 1.000000 insignificant 2.2293e-02 0.819881 weaklyHypermeth 1.00000000 1.00000 insignificant 0.0584382 4.8004e-01 insignificant 1.0000000 insignificant chr15 87733701 87734701 134282 MIR9-3 ENSG00000207819 0.355119 364 7 0.273510 222 7 0.555366 122 5 0.17276 410 7 0.26836 116 5 0.320076 318 7 0.330051 125 7 0.304705 157 7 0.296607 124 7 0.406647 90 5 0.360164 236 7 0.449499 52 2 0.272534 162 5 0.27080 61 2 0.346981 134 5 0.26373 51 3 0.17778 23 3 0.28092 610 7 0.482085 162 7 0.11919 414 7 0.46645 81 5 0.069894 138 5 0.296631 105 6 0.459404 84 8 0.27007 168 7 0.242253 264 7 0.32503 214 8 0.244048 33 3 0.19581 178 7 0.1200446 332 7 0.140155 301 7 0.515580 292 7 0.049857 207 7 0.080606 277 7 0.00000 98 3 0.13750 65 4 0.21670 138 7 0.31428 331 7 0.039716 554 7 0.18820 400 7 0.093789 463 7 0.21499 449 5 0.091372 511 7 0.335966 0.255269 0.50280 0.15037 0.224873 0.292375 0.335973 0.328128 0.279112 0.296797 0.393130 0.469986 0.184875 0.32292 0.219373 0.257966 0.269133 0.22299 0.379292 0.117053 0.46380 0.103481 0.258582 0.247521 0.241621 0.211700 0.204995 0.268392 0.16027 0.0993057 0.140935 0.543462 0.037060 0.049981 0.042534 0.18685 0.18518 0.23910 0.022595 0.13095 0.108470 0.214884 0.100334 3 0.257273 0.226960 0.02735410 7 0.284485 0.30094 -0.0164503 0.23447 0.835135 insignificant 1 1 insignificant 0.039450 9.7574e-01 weaklyHypermeth 1 1.000000 insignificant 0.036564 0.44971 insignificant 1 insignificant 0.257273 0.14516 0.108036 7 0.284485 0.16432 0.120169 1.1727e-06 7.8864e-01 weaklyHypermeth 3.2575e-05 1.0000e+00 weaklyHypermeth 3.0448e-06 9.9951e-01 weaklyHypermeth 0.00033832 1.0000e+00 weaklyHypermeth 0.182188 9.3728e-03 weaklyHypermeth 0.3231991 insignificant 0.257215 0.12032 0.139468 7 0.277506 0.12140 0.156106 1.9114e-07 1.0000e+00 weaklyHypermeth 6.3714e-05 1.0000e+00 weaklyHypermeth 5.1605e-08 1.0000e+00 weaklyHypermeth 5.1605e-05 1.00000000 weaklyHypermeth 0.189731 1.2321e-03 weaklyHypermeth 0.176012 insignificant 0.226960 0.14516 0.080615 7 0.30094 0.16432 0.136620 3.6648e-04 7.2798e-01 weaklyHypermeth 0.00631857 1.0000e+00 weaklyHypermeth 0.00020859 9.9337e-01 weaklyHypermeth 0.013906 1.0000e+00 weaklyHypermeth 0.145624 3.8322e-02 weaklyHypermeth 0.9010777 insignificant 0.224527 0.12032 0.106400 7 0.24869 0.12140 0.12728699 4.8397e-04 9.9943e-01 weaklyHypermeth 2.7547e-02 1.0000e+00 weaklyHypermeth 3.9902e-04 9.9979e-01 weaklyHypermeth 0.07980376 1.00000000 weaklyHypermeth 0.1531669 1.1438e-02 weaklyHypermeth 1.0000000 insignificant 0.14568 0.12032 0.033022 7 0.18779 0.12140 0.066388 1.0986e-01 0.2658772 insignificant 1.0000e+00 1.000000 insignificant 7.6644e-01 0.141800 insignificant 1.00000000 1.00000 insignificant 0.0075426 8.9882e-01 insignificant 1.0000000 insignificant chr15 87734160 87735160 134283 MIR9-3 ENSG00000207819 0.355179 183 5 0.275178 130 5 0.567265 57 3 0.18405 209 5 0.29247 39 3 0.337837 174 5 0.305974 43 5 0.271032 85 5 0.306256 69 5 0.442857 43 3 0.335812 117 5 0.416667 12 0 0.314267 103 3 0.33333 6 0 0.255000 49 3 0.32000 15 1 0.17778 23 3 0.31748 250 5 0.540127 59 5 0.11592 210 5 0.46793 44 3 0.043307 116 3 0.311082 74 4 0.435178 50 6 0.22738 75 5 0.251619 126 5 0.28881 78 5 0.216667 17 1 0.26220 70 5 0.1269558 197 5 0.134679 171 5 0.475241 180 5 0.065544 116 5 0.097391 68 5 0.00000 88 1 0.10159 21 2 0.30505 87 5 0.36148 161 5 0.052628 285 5 0.23138 238 5 0.074551 180 5 0.21050 136 3 0.084405 272 5 0.294898 0.228124 0.47384 0.16186 0.252525 0.308920 0.240299 0.239064 0.287881 0.247475 0.335155 0.421083 0.207987 0.33532 0.172475 0.252525 0.216538 0.27450 0.459127 0.099572 0.47895 0.057304 0.258844 0.210761 0.202020 0.206928 0.222324 0.223064 0.20561 0.0993531 0.122481 0.430367 0.080357 0.069390 0.109987 0.13468 0.29997 0.33123 0.046640 0.20892 0.062175 0.188389 0.086987 1 0.246802 0.208579 0.03085360 5 0.281492 0.25039 0.0311005 0.19162 0.935255 insignificant 1 1 insignificant 0.070087 9.8653e-01 insignificant 1 1.000000 insignificant 0.053137 0.26622 lowCoverage 1 lowCoverage 0.246802 0.19409 0.038520 5 0.281492 0.22269 0.058806 3.1810e-04 4.1232e-01 weaklyHypermeth 5.5807e-03 1.0000e+00 weaklyHypermeth 2.1317e-04 9.7686e-01 weaklyHypermeth 0.00968936 1.0000e+00 weaklyHypermeth 0.168049 3.4016e-02 lowCoverage 0.8951542 lowCoverage 0.246802 0.12061 0.131284 5 0.281492 0.12195 0.159538 1.3653e-05 9.9999e-01 weaklyHypermeth 1.3653e-03 1.0000e+00 weaklyHypermeth 5.3762e-05 1.0000e+00 weaklyHypermeth 1.3440e-02 1.00000000 weaklyHypermeth 0.192530 2.6837e-03 lowCoverage 0.298188 lowCoverage 0.208579 0.19409 0.012862 5 0.25039 0.22269 0.027706 9.2831e-03 2.9430e-01 weaklyHypermeth 0.13261519 1.0000e+00 insignificant 0.00386751 8.8116e-01 weaklyHypermeth 0.099167 1.0000e+00 weaklyHypermeth 0.114912 1.3645e-01 lowCoverage 1.0000000 lowCoverage 0.208579 0.12061 0.092118 5 0.25039 0.12195 0.12843759 2.0691e-03 9.9277e-01 weaklyHypermeth 8.9962e-02 1.0000e+00 weaklyHypermeth 6.7100e-03 9.9476e-01 weaklyHypermeth 0.74555561 1.00000000 insignificant 0.1393932 2.4343e-02 lowCoverage 1.0000000 lowCoverage 0.19409 0.12061 0.092029 5 0.22269 0.12195 0.100732 5.2773e-02 0.3636802 insignificant 1.0000e+00 1.000000 insignificant 5.3257e-01 0.163245 insignificant 1.00000000 1.00000 insignificant 0.0244811 7.3380e-01 lowCoverage 1.0000000 lowCoverage chr15 87788662 87789662 134288 MIR9-3 ENSG00000207819 0.353056 127 5 0.265447 97 5 0.276029 78 5 0.27914 207 5 0.38043 83 5 0.499385 164 5 0.255128 92 5 0.127720 125 5 0.183991 155 5 0.371362 94 5 0.368696 113 5 0.237936 66 5 0.048456 236 5 0.34952 64 5 0.155433 151 5 0.20000 11 0 0.14945 88 5 0.22451 197 5 0.039174 111 5 0.21342 214 5 0.25667 22 3 0.117653 181 5 0.314679 122 5 0.290115 105 5 0.32197 123 5 0.198334 113 5 0.38559 129 5 0.292017 67 5 0.27528 95 5 0.1682783 180 5 0.078244 180 5 0.525000 190 5 0.083524 118 5 0.018116 99 5 0.50000 39 2 0.14794 85 5 0.14787 64 5 0.17075 107 5 0.103304 296 5 0.14424 203 5 0.078063 231 5 0.08718 206 5 0.139110 296 5 0.340499 0.251685 0.26214 0.26382 0.362326 0.476494 0.241154 0.189880 0.215874 0.286794 0.360429 0.233948 0.063047 0.31380 0.138352 0.157464 0.155905 0.20517 0.044356 0.199255 0.21902 0.146697 0.320045 0.291686 0.327317 0.188985 0.367310 0.367016 0.25447 0.1631668 0.076661 0.512863 0.087520 0.023428 0.251578 0.14143 0.17927 0.22062 0.093172 0.14370 0.075286 0.084965 0.131409 5 0.227659 0.264101 -0.03256930 5 0.222306 0.19209 0.0302184 0.89677 0.278263 insignificant 1 1 insignificant 0.884186 4.0356e-01 insignificant 1 1.000000 insignificant -0.019738 0.65406 lowCoverage 1 lowCoverage 0.227659 0.15039 0.093308 5 0.222306 0.10559 0.116718 1.7963e-03 9.3138e-01 weaklyHypermeth 2.8067e-02 1.0000e+00 weaklyHypermeth 3.5578e-03 9.9763e-01 weaklyHypermeth 0.09362557 1.0000e+00 weaklyHypermeth 0.070881 3.6695e-01 lowCoverage 1.0000000 lowCoverage 0.227992 0.10308 0.123384 5 0.244562 0.11247 0.132096 5.1594e-05 9.9999e-01 weaklyHypermeth 3.9688e-03 1.0000e+00 weaklyHypermeth 1.5276e-05 1.0000e+00 weaklyHypermeth 7.5872e-03 1.00000000 weaklyHypermeth 0.138534 9.4699e-05 lowCoverage 0.018940 lowCoverage 0.264101 0.15039 0.115774 5 0.19209 0.10559 0.086500 1.7357e-03 9.8929e-01 weaklyHypermeth 0.02769275 1.0000e+00 weaklyHypermeth 0.00402874 9.9441e-01 weaklyHypermeth 0.100719 1.0000e+00 insignificant 0.090619 2.7244e-01 lowCoverage 1.0000000 lowCoverage 0.264628 0.10308 0.157407 5 0.26892 0.11247 0.15645705 8.7157e-05 1.0000e+00 weaklyHypermeth 8.7157e-03 1.0000e+00 weaklyHypermeth 1.7772e-06 1.0000e+00 weaklyHypermeth 0.00088862 1.00000000 weaklyHypermeth 0.1582721 8.5455e-04 lowCoverage 0.1709103 lowCoverage 0.15157 0.10308 0.041871 5 0.14782 0.11247 0.035357 1.3211e-01 0.0146109 inconclusive 1.0000e+00 0.365273 insignificant 1.7584e-01 0.140743 insignificant 1.00000000 1.00000 insignificant 0.0676533 3.7284e-01 lowCoverage 1.0000000 lowCoverage chr15 93056537 93057537 134468 MCTP2 ENSG00000140563 0.880060 85 5 0.865446 137 7 0.756536 137 8 0.70450 62 2 0.83624 143 7 0.774765 131 5 0.845601 171 7 0.879362 109 7 0.817940 115 6 0.838750 128 7 0.817077 262 7 0.834538 112 6 0.848319 113 7 0.81111 12 2 0.782191 103 7 0.81111 75 6 0.86888 313 6 0.89295 57 3 0.765120 92 7 0.84770 104 7 0.79481 35 2 0.784874 40 3 0.875000 63 5 0.937500 80 6 0.88384 27 2 0.865732 127 8 0.87946 57 6 0.716510 54 5 0.90000 49 6 0.8253766 117 6 0.813048 93 7 0.829276 196 7 0.758520 159 7 0.735843 115 6 0.72049 122 8 0.72222 27 2 0.77076 126 6 0.80957 142 8 0.682479 78 2 0.87078 75 5 0.812500 57 2 0.78799 37 2 0.881019 72 2 0.591241 0.593840 0.56953 0.61792 0.541737 0.488317 0.490982 0.676118 0.538363 0.545397 0.600670 0.550650 0.592778 0.75886 0.687523 0.519604 0.585362 0.68256 0.435222 0.653513 0.60161 0.538694 0.576642 0.783455 0.704645 0.628331 0.686392 0.505060 0.65839 0.4917656 0.536464 0.588046 0.552366 0.526004 0.481346 0.63546 0.54508 0.59130 0.471775 0.61620 0.520681 0.458101 0.598270 2 0.747257 0.735608 -0.01186572 6 0.834245 0.84800 -0.0137507 0.74757 0.197529 insignificant 1 1 insignificant 0.862508 6.7263e-02 insignificant 1 1.000000 insignificant -0.018209 0.38323 insignificant 1 insignificant 0.747257 0.70767 0.041657 7 0.834245 0.77128 0.062967 2.1776e-04 9.4736e-01 weaklyHypermeth 4.1086e-03 1.0000e+00 weaklyHypermeth 3.0423e-03 9.8335e-01 weaklyHypermeth 0.08222478 1.0000e+00 weaklyHypermeth 0.071009 1.7764e-03 weaklyHypermeth 0.1044950 insignificant 0.747257 0.55799 0.041043 2 0.834245 0.82608 0.008162 3.5612e-01 1.6875e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6606e-01 1.0543e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.016957 6.6896e-01 lowCoverage 1.000000 lowCoverage 0.735608 0.70767 0.062647 6 0.84800 0.77128 0.076718 1.5663e-04 9.9013e-01 weaklyHypermeth 0.00301213 1.0000e+00 weaklyHypermeth 0.00064864 9.9907e-01 weaklyHypermeth 0.026391 1.0000e+00 weaklyHypermeth 0.089218 1.0779e-03 weaklyHypermeth 0.0634043 weaklyHypermeth 0.735608 0.55799 0.052650 2 0.84800 0.82608 0.02191270 4.9034e-01 4.8992e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.1826e-01 5.3828e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.0351656 4.0950e-01 lowCoverage 1.0000000 lowCoverage 0.70767 0.55799 0.012053 2 0.77128 0.82608 -0.054805 8.6246e-01 0.0015153 lowCoverage 1.0000e+00 0.056121 lowCoverage 9.8745e-01 0.018122 lowCoverage 1.00000000 0.58458 lowCoverage -0.0540524 2.1489e-01 lowCoverage 1.0000000 lowCoverage chr15 93540246 93541246 134527 ENSG00000176070 0.882115 519 7 0.892681 622 7 0.558478 176 6 0.92093 392 6 0.94711 119 6 0.906722 571 7 0.918883 136 6 0.963212 338 6 0.862654 215 6 0.906737 159 6 0.909932 409 7 0.813841 66 6 0.978213 214 7 0.86521 150 6 0.889800 264 6 0.94444 65 4 0.91471 567 3 0.89223 489 7 0.873133 334 7 0.92969 386 7 0.82285 51 6 0.876664 99 6 0.857430 172 7 0.871098 87 7 0.97143 42 6 0.900275 467 6 0.91111 91 6 0.909244 94 7 0.77620 439 6 0.9805597 578 7 0.847173 518 7 0.778061 479 7 0.925552 358 7 0.907341 100 7 0.73297 768 7 0.75000 5 0 0.86683 229 6 0.85016 467 7 0.925107 533 7 0.93050 341 7 0.902335 400 7 0.93960 309 7 0.935141 275 6 0.880005 0.880678 0.64770 0.90298 0.947961 0.920405 0.901795 0.953037 0.867401 0.879010 0.896597 0.936078 0.970592 0.86229 0.851256 0.936692 0.870104 0.88437 0.897155 0.931505 0.86803 0.864107 0.862598 0.840998 0.963636 0.962471 0.937710 0.964706 0.89255 0.9768244 0.855211 0.760860 0.912817 0.876772 0.646109 0.79152 0.85705 0.82286 0.915477 0.92722 0.915689 0.955908 0.924881 6 0.903038 0.890600 0.01172766 6 0.896252 0.87441 0.0218377 0.30784 0.468585 insignificant 1 1 insignificant 0.637648 4.5086e-01 insignificant 1 1.000000 insignificant 0.013362 0.62365 insignificant 1 insignificant 0.903085 0.78464 0.122851 6 0.909221 0.82953 0.079689 2.0375e-05 5.5662e-01 weaklyHypermeth 4.5277e-04 1.0000e+00 weaklyHypermeth 3.4143e-01 6.4707e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.049726 2.2428e-01 insignificant 1.0000000 insignificant 0.903038 0.92411 -0.021153 6 0.896252 0.92668 -0.030432 8.8146e-01 7.0218e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7960e-01 1.6882e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.038000 7.5490e-02 insignificant 1.000000 insignificant 0.890600 0.78442 0.107352 7 0.87441 0.80518 0.069236 9.6920e-04 3.7991e-01 weaklyHypermeth 0.01615332 1.0000e+00 weaklyHypermeth 0.10785841 4.6489e-01 insignificant 1.000000 1.0000e+00 insignificant 0.036364 3.6255e-01 insignificant 1.0000000 insignificant 0.890600 0.92411 -0.031306 7 0.87441 0.92668 -0.05226976 6.1201e-01 1.7464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7206e-01 3.6718e-01 insignificant 1.00000000 1.00000000 insignificant -0.0513620 2.2359e-02 weaklyHypometh 1.0000000 insignificant 0.78442 0.92411 -0.143798 7 0.80518 0.92668 -0.121506 8.3144e-01 0.0266796 weaklyHypometh 1.0000e+00 0.592881 insignificant 7.9330e-01 0.246225 insignificant 1.00000000 1.00000 insignificant -0.0877261 4.3493e-02 weaklyHypometh 1.0000000 insignificant chr15 93838954 93839954 134602 ENSG00000176070 0.803673 204 5 0.775978 87 4 0.254524 62 5 0.75766 156 4 0.82262 32 4 0.512967 63 5 0.544048 32 4 0.866574 160 4 0.554220 88 4 0.870140 106 4 0.838932 115 4 0.717308 49 4 0.782984 227 5 0.70000 26 4 0.831579 83 5 0.00000 22 3 0.17797 77 4 0.78785 227 4 0.885556 79 4 0.46561 53 5 0.78000 19 2 0.295386 200 5 0.711373 66 4 0.698985 75 5 0.77032 69 5 0.971412 174 4 0.84444 38 5 0.735556 38 4 0.85355 163 4 0.9469631 171 4 0.889556 183 4 0.811111 62 5 0.497136 144 5 0.742402 117 4 0.41053 158 5 0.51429 31 4 0.27324 85 5 0.70548 38 5 0.329484 383 4 0.41998 203 4 0.362951 229 4 0.42188 128 4 0.280168 243 4 0.806322 0.783145 0.15583 0.69727 0.775781 0.424824 0.500473 0.834200 0.623609 0.837042 0.792384 0.714722 0.763522 0.62693 0.800627 0.000000 0.217245 0.73735 0.853385 0.383510 0.70199 0.260830 0.757413 0.655940 0.809854 0.966497 0.932671 0.924577 0.82366 0.9343373 0.864016 0.780445 0.397559 0.761418 0.496689 0.39049 0.22338 0.67660 0.165522 0.40735 0.366163 0.426738 0.182655 4 0.698665 0.759936 -0.06225264 4 0.716266 0.75058 -0.0343178 0.84956 0.217839 lowCoverage 1 1 lowCoverage 0.990653 8.5093e-05 lowCoverage 1 0.085093 lowCoverage -0.128212 0.10137 lowCoverage 1 lowCoverage 0.698665 0.49389 0.206161 4 0.716266 0.49301 0.223253 3.0360e-05 9.9964e-01 lowCoverage 6.4596e-04 1.0000e+00 lowCoverage 7.0229e-02 9.8862e-01 lowCoverage 0.98914468 1.0000e+00 lowCoverage 0.123665 2.0370e-01 lowCoverage 1.0000000 lowCoverage 0.698665 0.27825 0.415852 4 0.716266 0.36231 0.353951 4.6168e-12 9.9996e-01 lowCoverage 4.6168e-09 1.0000e+00 lowCoverage 2.2761e-05 1.0000e+00 lowCoverage 7.5872e-03 1.00000000 lowCoverage 0.284618 1.4946e-04 lowCoverage 0.024910 lowCoverage 0.759936 0.49389 0.266173 5 0.75058 0.49301 0.257571 2.1768e-04 9.9988e-01 hypermethylated 0.00403116 1.0000e+00 hypermethylated 0.00045024 9.9994e-01 hypermethylated 0.021440 1.0000e+00 hypermethylated 0.251877 1.7149e-02 lowCoverage 0.5675361 lowCoverage 0.759936 0.27825 0.481819 4 0.75058 0.36231 0.38826872 1.8515e-09 9.9900e-01 lowCoverage 9.2577e-07 1.0000e+00 lowCoverage 5.4486e-07 9.9976e-01 lowCoverage 0.00054486 1.00000000 lowCoverage 0.4128294 3.1538e-06 lowCoverage 0.0031538 lowCoverage 0.49389 0.27825 0.211061 4 0.49301 0.36231 0.130698 3.5482e-02 0.9432113 lowCoverage 1.0000e+00 1.000000 lowCoverage 1.0398e-01 0.988764 lowCoverage 1.00000000 1.00000 lowCoverage 0.1609527 7.9950e-02 lowCoverage 1.0000000 lowCoverage chr15 94254476 94255476 134709 ENSG00000208900 0.028987 207 5 0.020036 115 5 0.056313 109 5 0.00000 60 2 0.07000 52 5 0.041518 243 5 0.022525 108 5 0.013968 117 5 0.021182 111 5 0.036571 78 5 0.033333 109 5 0.024444 44 2 0.021637 131 5 NA 0 0 0.022934 124 5 0.04100 69 5 0.01000 112 5 0.18970 74 5 0.147143 56 5 0.01694 206 5 0.18889 34 4 0.077622 91 5 0.060671 128 5 0.069048 53 2 0.02500 35 5 0.036742 161 5 0.11538 52 2 0.011765 47 5 0.00000 87 5 0.0035088 174 5 0.013696 214 5 0.072597 247 5 0.706667 44 2 0.821096 69 5 0.69038 142 2 0.56364 38 5 0.76429 37 5 0.53231 93 5 0.090991 200 5 0.25895 187 5 0.089733 144 5 0.22290 219 5 0.212534 136 5 0.037616 0.018828 0.05363 0.00000 0.053086 0.045827 0.034841 0.022438 0.016405 0.024586 0.050583 0.041221 0.011985 NA 0.025421 0.047531 0.014198 0.24338 0.188845 0.020598 0.10974 0.114133 0.063125 0.050191 0.035494 0.031082 0.068139 0.023602 0.00000 0.0049816 0.014374 0.068139 0.759465 0.787292 0.713927 0.60092 0.77800 0.52507 0.088802 0.28035 0.106981 0.215334 0.221461 2 0.043294 0.042328 0.00091186 5 0.037861 0.04354 -0.0056787 0.71528 0.464903 insignificant 1 1 insignificant 0.366584 4.4859e-01 insignificant 1 1.000000 insignificant -0.013179 0.50057 lowCoverage 1 lowCoverage 0.043294 0.67139 -0.625296 5 0.037861 0.69494 -0.657081 1.0000e+00 1.2361e-53 hypomethylated 1.0000e+00 1.2361e-50 hypomethylated 1.0000e+00 2.7304e-14 hypomethylated 1.00000000 2.7304e-11 hypomethylated -0.636665 1.8040e-05 lowCoverage 0.0045099 lowCoverage 0.043294 0.18059 -0.137718 5 0.037861 0.17924 -0.141378 1.0000e+00 9.3546e-14 weaklyHypometh 1.0000e+00 9.3546e-11 weaklyHypometh 9.9999e-01 1.9459e-07 weaklyHypometh 1.0000e+00 0.00019459 weaklyHypometh -0.131957 1.7435e-02 lowCoverage 1.000000 lowCoverage 0.042328 0.67139 -0.629006 5 0.04354 0.69494 -0.651403 1.0000e+00 4.6284e-37 hypomethylated 1.00000000 4.6284e-34 hypomethylated 1.00000000 1.4399e-11 hypomethylated 1.000000 1.4399e-08 hypomethylated -0.623486 1.0373e-05 lowCoverage 0.0034578 lowCoverage 0.042328 0.18059 -0.139003 5 0.04354 0.17924 -0.13569881 9.9958e-01 9.2446e-11 weaklyHypometh 1.0000e+00 9.2446e-08 weaklyHypometh 9.9647e-01 3.5559e-07 weaklyHypometh 1.00000000 0.00035559 weaklyHypometh -0.1187786 2.3790e-02 lowCoverage 1.0000000 lowCoverage 0.67139 0.18059 0.492620 5 0.69494 0.17924 0.515704 2.4733e-14 1.0000000 hypermethylated 2.4733e-11 1.000000 hypermethylated 1.5406e-07 1.000000 hypermethylated 0.00015406 1.00000 hypermethylated 0.5047078 1.2757e-05 lowCoverage 0.0042524 lowCoverage chr15 96866143 96867143 135100 FAM169B ENSG00000185087 0.92319 170 5 0.80420 254 5 0.66425 123 5 0.90363 112 3 0.91850 98 5 0.91349 232 5 0.83538 150 5 0.88285 101 5 0.81861 96 5 0.96429 65 5 0.86301 235 5 0.83135 52 5 0.89295 114 5 0.84325 37 3 0.89159 109 5 0.83333 18 1 0.766667 17 1 0.71648 133 4 0.86855 241 5 0.91202 204 5 0.83533 86 5 0.87673 48 3 0.89549 186 5 0.87905 77 4 0.96462 47 3 0.89048 311 5 0.85277 114 5 0.94444 47 4 0.88314 246 5 0.92490 281 5 0.898131 292 5 0.90248 246 5 0.028831 238 5 0.0433333 146 5 0.0000000 247 4 0.050000 19 2 0.021270 242 4 0.031149 373 5 0.94304 224 5 0.77145 211 5 0.887790 118 3 0.77172 97 3 0.75659 111 3 0.91953 0.76486 0.62250 0.87844 0.85964 0.90146 0.81304 0.90913 0.80288 0.91832 0.82657 0.77120 0.92441 0.86503 0.89567 0.85653 0.741421 0.57948 0.91107 0.88649 0.76775 0.77600 0.87938 0.83749 0.93661 0.92137 0.81880 0.89944 0.88984 0.91032 0.90402 0.89066 0.018782 0.0231013 0.0118312 0.074367 0.022584 0.024650 0.899310 0.800922 0.829746 0.69914 0.73449 3 0.82884 0.88894 -0.05956785 5 0.85300 0.90345 -0.05045167 0.9990195 0.0080450 weaklyHypometh 1 1.00000 insignificant 0.9438123 0.0375263 weaklyHypometh 1 1 insignificant -0.04325198 0.033874 lowCoverage 1 lowCoverage 0.82884 0.021344 0.81038847 5 0.85300 0.028539 0.8244593 1.4925e-61 1.00000 hypermethylated 4.9751e-59 1 hypermethylated 2.4243e-14 1.000000 hypermethylated 3.0304e-12 1 hypermethylated 0.8232808 1.1362e-24 lowCoverage 5.6808e-22 lowCoverage 0.82884 0.81078 0.0143391 4 0.85300 0.84104 0.01195483 2.2045e-01 3.5666e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.3277e-01 0.5383263 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0262606 5.4711e-01 lowCoverage 1.000000 lowCoverage 0.88894 0.021344 0.8699437 5 0.90345 0.028539 0.8749110 2.5898e-70 1.000000 hypermethylated 8.6328e-68 1 hypermethylated 1.9552e-12 1.000000 hypermethylated 2.4439e-10 1 hypermethylated 0.8665328 3.6219e-21 lowCoverage 3.6219e-18 lowCoverage 0.88894 0.81078 0.07332976 4 0.90345 0.84104 0.0624065 1.4003e-03 0.9181611 lowCoverage 6.0884e-02 1 lowCoverage 6.8429e-02 0.8345688 lowCoverage 1.0000e+00 1 lowCoverage 0.0695126 1.3951e-01 lowCoverage 1.0000000 lowCoverage 0.021344 0.81078 -0.793941 4 0.028539 0.84104 -0.8125045 1.000000 1.4939e-29 lowCoverage 1 4.9797e-27 lowCoverage 1.00000 1.1100e-08 lowCoverage 1 2.2200e-06 lowCoverage -0.79702014 1.7767e-05 lowCoverage 0.00179543 lowCoverage chr15 97392066 97393066 135125 ENSG00000183571 0.78091 110 5 0.66013 78 5 0.66667 27 3 0.67210 70 3 0.50000 24 3 0.84890 41 3 0.34524 22 3 0.84091 68 5 0.70476 23 2 0.81429 25 3 0.64413 159 5 0.64286 12 0 0.72917 48 3 0.83333 12 0 0.71333 33 4 0.69444 10 0 0.000000 2 0 0.88056 54 3 0.76613 143 5 0.48968 26 3 0.75000 13 1 0.80952 21 3 0.51923 40 3 0.88889 9 0 0.86952 28 5 0.72098 148 5 0.64881 23 3 0.53333 15 2 0.82424 38 3 0.64190 52 3 0.723056 170 5 0.83444 105 5 0.750000 22 3 0.6700368 51 3 0.8307971 95 5 0.666667 6 0 0.651786 23 3 0.818917 138 5 0.82667 84 5 0.84722 96 5 0.710145 69 3 0.81818 48 5 0.76471 51 3 0.65711 0.61801 0.67150 0.67734 0.61594 0.80291 0.35404 0.68692 0.56522 0.69720 0.71455 0.83696 0.73234 0.83696 0.52536 0.69565 NA 0.84420 0.74061 0.48861 0.75543 0.81366 0.69398 0.89130 0.78364 0.79661 0.65373 0.56087 0.71344 0.62304 0.63217 0.72464 0.673913 0.5632193 0.7232199 0.673913 0.540373 0.708907 0.715942 0.726902 0.713611 0.70356 0.76982 0 0.75785 0.79607 -0.02687994 5 0.70022 0.76743 -0.06721086 0.7145094 0.2596890 insignificant 1 1.00000 insignificant 0.8144699 0.1244420 insignificant 1 1 insignificant -0.06895063 0.244791 lowCoverage 1 lowCoverage 0.76259 0.770149 -0.00207593 5 0.79289 0.823775 -0.0308847 6.1204e-01 0.41748 insignificant 1.0000e+00 1 insignificant 9.1689e-01 0.399853 insignificant 1.0000e+00 1 insignificant -0.0699906 2.2716e-01 lowCoverage 1.0000e+00 lowCoverage 0.76259 0.79885 -0.0447828 5 0.79289 0.85466 -0.06176671 9.9155e-01 1.4781e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9798e-01 0.1390645 insignificant 1.0000e+00 1.00000 insignificant -0.1320077 1.8776e-02 lowCoverage 0.722155 lowCoverage 0.79604 0.770149 0.0188505 5 0.74547 0.823775 -0.0783073 5.7484e-01 0.319161 insignificant 1.0000e+00 1 insignificant 6.2242e-01 0.377256 insignificant 1.0000e+00 1 insignificant -0.0010400 9.8318e-01 lowCoverage 1.0000e+00 lowCoverage 0.79604 0.79885 -0.01974311 5 0.74547 0.85466 -0.1091893 9.5430e-01 0.1621273 insignificant 1.0000e+00 1 insignificant 8.7878e-01 0.2493932 insignificant 1.0000e+00 1 insignificant -0.0630571 1.6867e-01 lowCoverage 1.0000000 lowCoverage 0.770149 0.79885 -0.042416 5 0.823775 0.85466 -0.0308820 0.894658 3.7006e-01 insignificant 1 1.0000e+00 insignificant 0.97058 7.0040e-01 insignificant 1 1.0000e+00 insignificant -0.06201710 1.6666e-01 lowCoverage 1.00000000 lowCoverage chr15 98243753 98244753 135144 C15orf51 ENSG00000182397 0.60987 296 9 0.45667 187 9 0.44569 129 9 0.64057 174 9 0.55780 68 7 0.61462 289 9 0.46740 139 9 0.62031 176 9 0.52877 69 8 0.62453 105 9 0.63848 320 11 0.59257 83 9 0.56465 186 11 0.51020 48 3 0.54394 120 9 0.59347 87 9 0.671700 55 5 0.53113 150 7 0.64925 203 9 0.57837 313 9 0.37361 36 2 0.63115 110 7 0.63881 149 9 0.68769 77 7 0.64740 76 5 0.63474 185 11 0.53965 136 7 0.60262 64 8 0.46074 110 7 0.67227 235 9 0.520593 215 9 0.65590 376 9 0.447964 167 9 0.5018648 124 9 0.4124464 158 11 0.537302 81 5 0.485872 170 9 0.547224 216 9 0.62609 265 9 0.52614 231 9 0.665265 186 9 0.76528 178 7 0.66353 261 9 0.73221 0.58749 0.60209 0.71502 0.60601 0.70819 0.64803 0.66790 0.69683 0.70080 0.69645 0.67346 0.70201 0.69875 0.63648 0.68384 0.751331 0.64220 0.69417 0.70267 0.57660 0.64416 0.72605 0.78598 0.71622 0.74062 0.68928 0.68220 0.53569 0.74146 0.64242 0.70783 0.630365 0.5997732 0.5843817 0.648051 0.619235 0.646250 0.712744 0.712141 0.702281 0.75899 0.73592 6 0.66750 0.68287 -0.00762113 9 0.57770 0.58267 -0.00497268 0.8594862 0.4444661 insignificant 1 1.00000 insignificant 0.9263360 0.5319779 insignificant 1 1 insignificant -0.01676422 0.599775 insignificant 1 insignificant 0.66750 0.594978 0.05778671 9 0.57770 0.450693 0.1270044 1.1993e-04 0.99515 weaklyHypermeth 1.4991e-03 1 weaklyHypermeth 5.5523e-02 0.997920 insignificant 6.6099e-01 1 insignificant 0.0832213 8.6705e-03 weaklyHypermeth 1.6057e-01 insignificant 0.66750 0.70919 -0.0365243 9 0.57770 0.60968 -0.03198294 8.6110e-01 9.7798e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.9061e-01 0.0446189 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0772626 1.1705e-01 insignificant 1.000000 insignificant 0.68287 0.594978 0.0618917 9 0.58267 0.450693 0.1319771 5.2616e-03 0.996627 weaklyHypermeth 6.1901e-02 1 weaklyHypermeth 5.2826e-02 0.998232 insignificant 6.0029e-01 1 insignificant 0.0999856 1.1237e-02 weaklyHypermeth 2.0431e-01 insignificant 0.68287 0.70919 -0.02529089 9 0.58267 0.60968 -0.0270103 7.5617e-01 0.1759520 insignificant 1.0000e+00 1 insignificant 9.2694e-01 0.4607523 insignificant 1.0000e+00 1 insignificant -0.0604984 2.3600e-01 insignificant 1.0000000 insignificant 0.594978 0.70919 -0.080407 9 0.450693 0.60968 -0.1589874 0.982885 1.0470e-02 weaklyHypometh 1 1.3597e-01 insignificant 0.99648 9.4081e-03 weaklyHypometh 1 1.7106e-01 insignificant -0.16048393 9.7152e-03 weaklyHypometh 0.20974158 insignificant chr15 99136505 99137505 135171 ENSG00000212306 0.90864 209 7 0.76381 219 6 0.96110 113 5 0.90251 217 7 0.89494 78 5 0.93441 313 7 0.82099 67 5 0.86963 190 7 0.87746 97 5 0.95928 125 5 0.94203 259 10 0.65721 50 3 0.75427 157 5 0.76272 109 5 0.86813 159 7 0.67652 43 5 0.000000 1 0 0.80812 271 7 0.79989 223 7 0.94993 219 7 0.77350 94 7 0.77289 101 7 0.73349 131 8 0.77838 116 8 0.89350 128 10 0.79527 300 8 0.84161 227 10 0.75179 58 5 0.90773 254 5 0.89319 267 5 0.958890 240 5 0.91316 286 7 0.596945 212 7 0.6248698 182 10 0.5631944 303 7 0.533333 10 0 0.599053 172 5 0.394537 343 10 0.90304 153 7 0.81440 166 7 0.850891 171 7 0.71784 91 5 0.91894 152 7 0.86879 0.78671 0.88747 0.89543 0.81970 0.89366 0.88839 0.90652 0.76426 0.94245 0.88495 0.78847 0.95215 0.77168 0.84720 0.58416 NA 0.77580 0.92570 0.92993 0.90960 0.73823 0.86222 0.70613 0.93215 0.89622 0.83478 0.94350 0.92036 0.96043 0.91134 0.85759 0.538180 0.5043858 0.3941455 0.639775 0.432250 0.543508 0.915216 0.814027 0.910722 0.66446 0.88820 5 0.86278 0.88091 -0.01590956 7 0.79109 0.78041 0.01067794 0.5137267 0.5653518 insignificant 1 1.00000 insignificant 0.1890621 0.8555337 insignificant 1 1 insignificant -0.02886970 0.582362 insignificant 1 insignificant 0.86407 0.444354 0.40641797 7 0.89097 0.482939 0.4080344 3.5264e-36 0.99995 hypermethylated 2.7126e-34 1 hypermethylated 1.1452e-10 0.999790 hypermethylated 1.1452e-08 1 hypermethylated 0.2535919 2.5453e-04 hypermethylated 8.7770e-03 hypermethylated 0.86407 0.84836 0.0105820 7 0.89097 0.88721 0.00375905 7.7666e-01 9.2974e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2325e-01 0.9812900 insignificant 1.0000e+00 1.00000 insignificant -0.0354408 5.5671e-01 insignificant 1.000000 insignificant 0.88166 0.444354 0.4171758 7 0.88649 0.482939 0.4035542 1.4964e-27 0.999998 hypermethylated 9.9760e-26 1 hypermethylated 2.3779e-08 0.999909 hypermethylated 1.5853e-06 1 hypermethylated 0.2824616 5.6264e-05 hypermethylated 2.5575e-03 hypermethylated 0.88126 0.84857 0.02982756 7 0.80590 0.89747 -0.0915647 2.0143e-01 0.9595153 insignificant 1.0000e+00 1 insignificant 6.1111e-01 0.8946264 insignificant 1.0000e+00 1 insignificant -0.0065711 8.8034e-01 insignificant 1.0000000 insignificant 0.444354 0.84836 -0.409180 7 0.482939 0.88721 -0.4042754 0.999946 3.5672e-12 hypomethylated 1 2.7440e-10 hypomethylated 0.99994 2.7714e-04 hypomethylated 1 1.1085e-02 hypomethylated -0.28903267 2.7672e-04 hypomethylated 0.01429014 hypomethylated chr15 99763606 99764606 135180 SNRPA1 ENSG00000131876 0.88307 155 5 0.81556 41 5 0.84359 47 4 0.88586 124 5 0.56667 24 1 0.83894 108 5 0.38636 19 1 0.98710 44 1 0.78903 56 5 0.95000 36 1 0.87769 135 5 1.00000 5 0 0.63235 95 5 0.78947 19 1 0.91000 30 1 1.00000 14 1 0.200000 5 0 0.59882 153 5 0.77826 93 5 0.84204 98 5 0.73300 51 5 0.50189 92 5 0.67273 49 4 0.73297 36 4 0.75794 58 5 0.64802 125 5 0.74508 81 5 0.52778 13 1 0.83538 91 5 0.89659 124 5 0.787345 117 5 0.87837 171 5 0.412342 82 5 0.2166667 63 2 0.4292054 159 4 0.275000 21 1 0.475000 49 5 0.315098 159 5 0.63393 63 5 0.75917 73 5 0.658730 88 5 0.55235 48 2 0.69486 95 5 0.89142 0.62658 0.55680 0.86218 0.78059 0.87354 0.46835 0.95508 0.82982 0.82595 0.92672 0.94524 0.65190 0.79867 0.68671 0.94524 0.648617 0.61564 0.74289 0.78949 0.97788 0.33558 0.74885 0.49993 0.78315 0.71803 0.72147 0.70464 0.72882 0.79519 0.54356 0.88008 0.204677 0.0959916 0.3336077 0.349684 0.356917 0.141834 0.329340 0.497732 0.583685 0.44231 0.43829 1 0.79554 0.75099 0.05176599 5 0.58483 0.65447 -0.06964699 0.3668731 0.6490380 insignificant 1 1.00000 insignificant 0.1733086 0.9019128 insignificant 1 1 insignificant 0.05231692 0.379032 lowCoverage 1 lowCoverage 0.79615 0.311445 0.49083856 5 0.68230 0.323604 0.3586919 3.3621e-15 0.99998 hypermethylated 9.8885e-14 1 hypermethylated 1.1152e-07 1.000000 hypermethylated 5.8693e-06 1 hypermethylated 0.4248550 1.9107e-06 lowCoverage 1.1239e-04 lowCoverage 0.79615 0.54972 0.2200352 5 0.68230 0.57848 0.10381656 3.8214e-04 8.4779e-01 hypermethylated 1.5922e-02 1.0000000 hypermethylated 3.1028e-03 0.8930731 weaklyHypermeth 1.7248e-01 1.00000 insignificant 0.1189321 5.3232e-02 lowCoverage 1.000000 lowCoverage 0.75149 0.311445 0.4248282 5 0.68022 0.323604 0.3566134 2.5418e-11 0.999820 hypermethylated 7.0606e-10 1 hypermethylated 6.4352e-07 0.999999 hypermethylated 2.7979e-05 1 hypermethylated 0.3725380 1.5668e-05 lowCoverage 8.5129e-04 lowCoverage 0.75149 0.54972 0.17951903 5 0.68022 0.57848 0.1017380 1.1935e-02 0.6846874 weaklyHypermeth 3.5102e-01 1 insignificant 3.0355e-02 0.6479780 weaklyHypermeth 1.0000e+00 1 insignificant 0.0666152 2.0182e-01 lowCoverage 1.0000000 lowCoverage 0.311445 0.54972 -0.262910 5 0.323604 0.57848 -0.2548753 0.999953 3.9324e-04 hypomethylated 1 7.8648e-03 hypomethylated 1.00000 9.2566e-04 hypomethylated 1 2.6838e-02 hypomethylated -0.30592283 2.8580e-04 lowCoverage 0.01429014 lowCoverage chr15 100330201 100331201 135203 WASH3P ENSG00000185596 0.93290 347 7 0.88046 399 7 0.92952 260 7 0.93611 204 6 0.95787 169 8 0.92483 507 7 0.89108 262 8 0.92587 310 8 0.87501 230 7 0.92958 274 6 0.92170 476 8 0.84960 46 7 0.95545 454 7 0.88888 267 6 0.94248 299 6 0.72937 54 6 0.000000 3 0 0.95717 220 6 0.94607 666 7 0.90623 402 8 0.86156 139 7 0.77886 140 6 0.89997 244 7 0.83575 146 8 0.90190 159 6 0.95384 621 7 0.75089 367 8 0.84192 124 8 0.92528 407 8 0.92799 494 7 0.928226 587 8 0.91880 502 8 0.922538 256 7 0.9403392 269 8 0.9406798 222 7 0.887879 47 6 0.910061 133 7 0.904848 594 8 0.94204 320 8 0.91989 228 7 0.957026 202 6 0.83667 157 6 0.93747 247 6 0.91362 0.87878 0.93365 0.94084 0.95506 0.91965 0.89861 0.91083 0.85930 0.89962 0.92703 0.88927 0.94823 0.90602 0.93321 0.70877 0.564429 0.94836 0.93005 0.91348 0.85537 0.89859 0.91450 0.93699 0.88533 0.96166 0.87197 0.86477 0.91677 0.93287 0.91889 0.91393 0.902802 0.9264775 0.9357943 0.885491 0.888676 0.906771 0.940279 0.913700 0.951300 0.95172 0.91287 6 0.91469 0.91599 0.00020925 8 0.92456 0.92421 0.00034582 0.8296815 0.7723965 insignificant 1 1.00000 insignificant 0.2750990 0.8082041 insignificant 1 1 insignificant -0.01307368 0.797608 insignificant 1 insignificant 0.91467 0.913215 0.00273342 8 0.91513 0.919075 -0.0039449 3.2489e-01 0.20534 insignificant 1.0000e+00 1 insignificant 6.5962e-01 0.098367 insignificant 1.0000e+00 1 insignificant -0.0537151 2.7319e-01 insignificant 1.0000e+00 insignificant 0.91469 0.93322 -0.0188885 7 0.92456 0.83903 0.08553089 9.9491e-01 8.2921e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8022e-01 0.0300758 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0546102 3.0032e-01 insignificant 1.000000 insignificant 0.91597 0.913215 0.0020451 8 0.91474 0.919075 -0.0043339 3.6407e-01 0.304989 insignificant 1.0000e+00 1 insignificant 9.0668e-01 0.039428 inconclusive 1.0000e+00 1 insignificant -0.0406415 6.4597e-02 insignificant 8.3892e-01 insignificant 0.91552 0.93328 -0.01913522 7 0.83179 0.85513 -0.0233334 9.9742e-01 0.1502618 insignificant 1.0000e+00 1 insignificant 9.9803e-01 0.0016578 weaklyHypometh 1.0000e+00 1 insignificant -0.0415365 1.7124e-01 insignificant 1.0000000 insignificant 0.913215 0.93403 -0.024356 7 0.919075 0.94391 -0.0248328 0.983096 5.3298e-02 insignificant 1 6.0999e-01 insignificant 0.96547 3.1733e-01 insignificant 1 1.0000e+00 insignificant -0.00089504 9.7034e-01 insignificant 1.00000000 insignificant chr15 100330885 100331885 135204 WASH3P ENSG00000185596 0.92848 378 9 0.87609 415 10 0.91040 283 8 0.93819 221 8 0.97071 195 11 0.91975 515 8 0.86697 466 11 0.86006 350 10 0.88735 257 8 0.92902 354 10 0.91403 529 11 0.91892 60 8 0.93135 488 8 0.91446 284 8 0.94074 322 8 0.79192 84 9 0.551020 25 3 0.95976 245 8 0.94022 682 8 0.90668 440 9 0.88757 142 8 0.92258 164 8 0.92318 268 8 0.85830 156 9 0.88589 183 8 0.94496 630 8 0.82345 410 9 0.86197 173 11 0.93429 445 11 0.92657 497 8 0.932843 630 11 0.94281 551 11 0.921363 270 8 0.8821534 279 9 0.9258772 205 7 0.915909 53 6 0.872917 136 7 0.916910 679 11 0.91763 332 9 0.94392 239 8 0.944541 214 8 0.85482 166 7 0.95310 267 8 0.90714 0.88454 0.92319 0.94227 0.95769 0.92036 0.88521 0.90631 0.86678 0.90314 0.92068 0.90122 0.93983 0.90801 0.93604 0.71780 0.605679 0.94843 0.92413 0.91453 0.86468 0.91719 0.91552 0.94542 0.88398 0.95087 0.87969 0.86446 0.91788 0.93077 0.91953 0.92122 0.903558 0.8979532 0.9244770 0.899003 0.875888 0.909578 0.934686 0.923546 0.948547 0.95723 0.92281 8 0.91112 0.91900 -0.00577806 10 0.92085 0.93686 -0.01600981 0.9974032 0.1372298 insignificant 1 1.00000 insignificant 0.8371343 0.5880194 insignificant 1 1 insignificant -0.01089435 0.640463 insignificant 1 insignificant 0.91108 0.910604 0.00236713 10 0.90646 0.912959 -0.0064988 3.4853e-01 0.27724 insignificant 1.0000e+00 1 insignificant 6.3697e-01 0.259304 insignificant 1.0000e+00 1 insignificant -0.0130485 5.5975e-01 insignificant 1.0000e+00 insignificant 0.91109 0.93509 -0.0227425 8 0.91426 0.86708 0.04717338 9.9958e-01 4.1514e-03 weaklyHypometh 1.0000e+00 0.6918993 insignificant 9.9712e-01 0.0083305 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0299958 2.8328e-01 insignificant 1.000000 insignificant 0.91889 0.910604 0.0082389 10 0.92538 0.912959 0.0124219 1.5623e-01 0.767200 insignificant 1.0000e+00 1 insignificant 6.7931e-01 0.321223 insignificant 1.0000e+00 1 insignificant -0.0021541 8.8462e-01 insignificant 1.0000e+00 insignificant 0.91847 0.93514 -0.01935919 8 0.85994 0.87731 -0.0173686 9.9603e-01 0.1215105 insignificant 1.0000e+00 1 insignificant 9.9937e-01 0.0048671 weaklyHypometh 1.0000e+00 1 insignificant -0.0191015 3.9809e-01 insignificant 1.0000000 insignificant 0.910604 0.93586 -0.028701 8 0.912959 0.94591 -0.0329484 0.996845 2.1097e-03 weaklyHypometh 1 3.3487e-02 weaklyHypometh 0.99788 1.0451e-01 insignificant 1 1.0000e+00 insignificant -0.01694737 4.3352e-01 insignificant 1.00000000 insignificant chr15 100333442 100334442 135207 WASH3P ENSG00000185596 0.85901 445 9 0.77263 376 9 0.77054 303 9 0.90210 377 9 0.76677 203 9 0.83417 613 9 0.81004 316 9 0.77921 421 9 0.88628 280 9 0.88560 407 9 0.84360 545 9 0.95403 136 6 0.88911 402 9 0.94381 170 8 0.93122 243 9 0.66852 99 6 0.574728 47 4 0.87150 481 8 0.83038 433 9 0.87782 506 9 0.91503 160 9 0.86607 223 9 0.89467 281 9 0.85501 219 9 0.90090 384 9 0.88768 283 9 0.83164 387 9 0.83211 162 9 0.88905 366 9 0.86789 306 9 0.895864 305 9 0.88572 580 9 0.793227 339 9 0.6864600 368 9 0.7155978 391 9 0.575262 111 5 0.757359 306 9 0.676959 453 9 0.86284 588 9 0.85649 401 9 0.849293 366 8 0.90039 564 9 0.92031 437 9 0.89087 0.81228 0.85216 0.93624 0.88805 0.88181 0.84701 0.87628 0.88692 0.88660 0.87544 0.96074 0.91018 0.96004 0.92605 0.72544 0.794529 0.89395 0.85343 0.91137 0.92874 0.89201 0.91369 0.86071 0.92362 0.91660 0.85731 0.89135 0.90152 0.89948 0.89950 0.90106 0.804207 0.7408730 0.7243550 0.626891 0.753890 0.663533 0.883236 0.880000 0.870785 0.90486 0.93214 9 0.88240 0.89710 -0.01108068 9 0.71900 0.82439 -0.10538829 0.9174264 0.2241776 insignificant 1 1.00000 insignificant 0.9858737 0.0547580 insignificant 1 1 insignificant -0.04424968 0.056967 insignificant 1 insignificant 0.88276 0.725102 0.14994104 9 0.77946 0.661720 0.1177433 1.8942e-19 1.00000 weaklyHypermeth 7.0155e-18 1 weaklyHypermeth 9.6100e-07 0.999992 weaklyHypermeth 3.3138e-05 1 weaklyHypermeth 0.1317427 5.2885e-03 weaklyHypermeth 1.0412e-01 insignificant 0.88252 0.89643 -0.0045792 9 0.73891 0.89679 -0.15788365 9.3378e-01 6.2922e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.6065e-01 0.4719162 insignificant 1.0000e+00 1.00000 insignificant -0.0453079 8.3614e-02 insignificant 1.000000 insignificant 0.89729 0.725102 0.1661931 9 0.88926 0.661720 0.2275426 1.5001e-15 1.000000 weaklyHypermeth 6.0004e-14 1 weaklyHypermeth 4.7217e-07 1.000000 weaklyHypermeth 2.2484e-05 1 weaklyHypermeth 0.1759924 1.7967e-03 weaklyHypermeth 4.2739e-02 weaklyHypermeth 0.89704 0.89643 0.00299896 9 0.80842 0.89679 -0.0883692 8.2664e-01 0.9672291 insignificant 1.0000e+00 1 insignificant 7.5256e-01 0.9735968 insignificant 1.0000e+00 1 insignificant -0.0010582 9.4854e-01 insignificant 1.0000000 insignificant 0.725102 0.89635 -0.158430 9 0.661720 0.88647 -0.2247486 0.999994 2.0082e-07 weaklyHypometh 1 6.9243e-06 weaklyHypometh 1.00000 4.4108e-05 weaklyHypometh 1 2.5946e-03 weaklyHypometh -0.17705055 1.2731e-03 weaklyHypometh 0.04546847 weaklyHypometh chr16 546098 547098 135213 SOLH ENSG00000103326 0.81607 721 23 0.78902 573 21 0.77627 674 21 0.81796 746 24 0.79842 507 21 0.78533 997 23 0.74372 657 18 0.86861 514 19 0.86227 534 19 0.84827 674 21 0.87978 974 25 0.90691 456 18 0.85156 670 20 0.82093 326 10 0.83874 655 15 0.70778 317 14 0.685151 130 9 0.75547 950 19 0.82149 941 21 0.84964 833 20 0.86604 356 19 0.73576 358 18 0.78940 529 25 0.84574 453 21 0.86219 268 14 0.82229 873 25 0.88665 627 20 0.91806 391 21 0.85098 799 22 0.87251 921 22 0.859663 707 20 0.90926 949 23 0.679021 510 23 0.7558570 639 25 0.8601063 566 18 0.666133 176 16 0.699177 540 24 0.816729 854 23 0.68903 591 21 0.72907 782 25 0.834625 556 15 0.72815 955 21 0.79541 525 22 0.89989 0.82767 0.83098 0.89708 0.93296 0.89080 0.83000 0.88224 0.88094 0.89558 0.90439 0.92075 0.87366 0.86811 0.87886 0.76877 0.838652 0.85001 0.91348 0.88689 0.87930 0.81802 0.90323 0.90175 0.87931 0.89263 0.88799 0.90665 0.91184 0.89298 0.88240 0.90965 0.738009 0.8200838 0.8059363 0.744449 0.855724 0.883473 0.819053 0.793576 0.880645 0.81238 0.80459 14 0.87254 0.88688 -0.01370699 21 0.77521 0.80194 -0.02672818 0.9903113 0.0169459 weaklyHypometh 1 1.00000 insignificant 0.9987141 0.0295127 weaklyHypometh 1 1 insignificant -0.04037677 0.047227 weaklyHypometh 1 insignificant 0.87254 0.825875 0.04349110 22 0.77521 0.694425 0.0807852 3.2159e-11 0.30017 weaklyHypermeth 7.8436e-10 1 weaklyHypermeth 5.3213e-05 0.498524 weaklyHypermeth 1.1825e-03 1 weaklyHypermeth 0.0649980 1.0522e-01 insignificant 1.0000e+00 insignificant 0.87289 0.80082 0.0678569 22 0.80189 0.74329 0.05860170 1.4660e-13 9.8689e-01 weaklyHypermeth 4.8867e-11 1.0000000 weaklyHypermeth 2.3537e-05 0.9559400 weaklyHypermeth 3.7874e-03 1.00000 weaklyHypermeth 0.0559113 1.0299e-01 insignificant 1.000000 insignificant 0.88688 0.825875 0.0560674 21 0.80194 0.694425 0.1075134 4.9323e-09 0.659594 weaklyHypermeth 1.2030e-07 1 weaklyHypermeth 6.5659e-05 0.868403 weaklyHypermeth 1.7279e-03 1 weaklyHypermeth 0.1053748 2.0163e-02 weaklyHypermeth 3.0551e-01 insignificant 0.88769 0.80065 0.08157034 21 0.84927 0.73444 0.1148283 1.8316e-16 0.9964479 weaklyHypermeth 4.5791e-14 1 weaklyHypermeth 3.9948e-07 0.9952601 weaklyHypermeth 9.9871e-05 1 weaklyHypermeth 0.0962880 1.5947e-02 weaklyHypermeth 0.7248823 insignificant 0.827281 0.80065 0.022429 24 0.724883 0.73444 -0.0095543 0.051247 7.0713e-01 insignificant 1 1.0000e+00 insignificant 0.26170 7.7063e-01 insignificant 1 1.0000e+00 insignificant -0.00908679 8.3175e-01 insignificant 1.00000000 insignificant chr16 1042902 1043902 135214 SOX8 ENSG00000005513 0.82712 186 10 0.91489 194 6 0.77749 199 8 0.87421 125 10 0.85550 93 7 0.89432 148 8 0.78976 101 7 0.89252 187 8 0.86501 169 8 0.94942 184 8 0.90796 233 8 0.75791 87 6 0.84688 247 8 0.91905 24 3 0.93530 142 8 0.63690 43 5 0.655556 30 4 0.86676 102 7 0.85863 196 7 0.71785 144 8 0.91458 130 8 0.83886 83 4 0.81000 154 8 0.84091 108 8 0.83878 32 3 0.93317 217 8 0.82694 133 8 0.79091 47 4 0.87824 178 8 0.74052 235 8 0.830339 205 7 0.92824 219 8 0.234789 267 8 0.2026036 259 8 0.4705882 89 5 0.119920 76 8 0.357456 101 8 0.430685 252 11 0.84048 113 7 0.87323 149 10 0.781403 133 9 0.77467 150 10 0.81419 133 10 0.79811 0.90353 0.77619 0.85773 0.79790 0.86584 0.71669 0.86554 0.85675 0.93499 0.89300 0.75550 0.85647 0.87262 0.94340 0.64953 0.642265 0.85310 0.84945 0.80280 0.89297 0.85689 0.83263 0.83206 0.88223 0.90614 0.81079 0.74195 0.88808 0.91964 0.83599 0.90158 0.243606 0.2085085 0.3533889 0.144459 0.363206 0.336454 0.774559 0.826716 0.842374 0.73295 0.84806 2 0.85906 0.87370 -0.01532776 8 0.86962 0.88116 -0.01153797 0.6285642 0.0363705 weaklyHypometh 1 1.00000 insignificant 0.9868862 0.0278991 weaklyHypometh 1 1 insignificant -0.01047291 0.688406 insignificant 1 insignificant 0.85906 0.264875 0.59370934 8 0.86962 0.349800 0.5198190 9.0689e-65 1.00000 hypermethylated 4.5344e-62 1 hypermethylated 2.7012e-15 1.000000 hypermethylated 3.8588e-13 1 hypermethylated 0.5344782 8.4229e-05 hypermethylated 3.2396e-03 hypermethylated 0.85906 0.80473 0.0477343 7 0.86962 0.80917 0.06044821 2.0310e-04 9.9791e-01 weaklyHypermeth 9.2320e-03 1.0000000 weaklyHypermeth 1.4712e-01 0.7899033 insignificant 1.0000e+00 1.00000 insignificant 0.0203578 4.6409e-01 insignificant 1.000000 insignificant 0.87320 0.265580 0.6106487 8 0.80773 0.403983 0.4037439 4.9346e-41 1.000000 hypermethylated 6.1682e-39 1 hypermethylated 1.5073e-12 1.000000 hypermethylated 2.1533e-10 1 hypermethylated 0.5449511 1.0064e-04 hypermethylated 4.1935e-03 hypermethylated 0.87126 0.80383 0.06132988 7 0.82252 0.76161 0.0609114 8.4357e-03 0.9998844 weaklyHypermeth 2.7212e-01 1 insignificant 1.0303e-01 0.9818421 insignificant 1.0000e+00 1 insignificant 0.0308307 2.4017e-01 insignificant 1.0000000 insignificant 0.264875 0.80473 -0.543977 7 0.349800 0.80917 -0.4593708 1.000000 2.4208e-21 hypomethylated 1 3.4583e-19 hypomethylated 1.00000 5.0968e-10 hypomethylated 1 1.6989e-07 hypomethylated -0.51412035 1.2679e-04 hypomethylated 0.00975271 hypomethylated chr16 2414140 2415140 135218 ABCA3 ENSG00000167972 0.80266 275 6 0.80834 162 6 0.80816 133 6 0.81258 219 6 0.82386 79 5 0.78922 270 8 0.79366 120 6 0.94369 79 6 0.81225 138 6 0.92871 155 6 0.89067 154 6 0.85590 81 4 0.82285 229 6 0.92828 118 6 0.91153 156 6 0.77308 43 4 0.917208 43 4 0.77428 275 7 0.85642 137 8 0.77354 210 6 0.92472 52 4 0.93164 95 4 0.90928 121 6 0.76500 54 3 0.97500 46 4 0.91384 219 6 0.59187 78 4 0.67865 82 4 0.95426 141 8 0.94777 180 8 0.924282 175 6 0.90805 312 6 0.532525 153 6 0.7668191 113 8 1.0000000 90 4 0.908333 32 4 0.735877 92 5 0.850671 148 6 0.88681 309 6 0.92025 240 8 0.957214 233 6 0.90418 341 6 0.89188 232 6 0.93923 0.80686 0.85608 0.91372 0.98701 0.84751 0.82136 0.90464 0.90755 0.91896 0.89780 0.80880 0.89555 0.92507 0.94003 0.76615 0.913411 0.94848 0.88973 0.92777 0.87743 0.91698 0.83776 0.95265 0.97469 0.93931 0.86908 0.85353 0.95414 0.97905 0.90808 0.93590 0.615935 0.8380023 1.0000000 0.928435 0.717532 0.923376 0.977694 0.916533 0.958375 0.91090 0.95167 4 0.88683 0.91559 -0.02957308 6 0.82046 0.90659 -0.08612738 0.9996367 0.0049521 weaklyHypometh 1 0.99042 insignificant 0.9997294 0.0156138 weaklyHypometh 1 1 insignificant -0.02735124 0.478237 insignificant 1 insignificant 0.88683 0.802548 0.07167470 4 0.82046 0.749902 0.0705608 1.1496e-03 0.98987 lowCoverage 1.3686e-02 1 lowCoverage 1.4919e-01 0.757734 lowCoverage 1.0000e+00 1 lowCoverage 0.0423076 5.5558e-01 insignificant 1.0000e+00 insignificant 0.88683 0.93801 -0.0510738 6 0.82046 0.90017 -0.07970944 9.9980e-01 1.8760e-03 weaklyHypometh 1.0000e+00 0.6775461 insignificant 9.9956e-01 0.0023850 weaklyHypometh 1.0000e+00 0.53128 insignificant -0.0707238 1.6821e-03 weaklyHypometh 0.159302 insignificant 0.91559 0.802548 0.1033196 4 0.90659 0.749902 0.1566882 9.5020e-05 0.999872 lowCoverage 1.2340e-03 1 lowCoverage 1.7640e-02 0.951373 lowCoverage 2.2616e-01 1 lowCoverage 0.0696588 3.7970e-01 insignificant 1.0000e+00 insignificant 0.91559 0.93801 -0.02226441 6 0.90659 0.90017 0.0064179 8.8134e-01 0.0603921 insignificant 1.0000e+00 1 insignificant 7.5826e-01 0.2336056 insignificant 1.0000e+00 1 insignificant -0.0433726 2.6686e-01 insignificant 1.0000000 insignificant 0.802548 0.93801 -0.126874 4 0.749902 0.90017 -0.1502703 0.999452 4.8693e-03 lowCoverage 1 6.8420e-02 lowCoverage 0.93236 6.3656e-02 lowCoverage 1 8.7200e-01 lowCoverage -0.11303138 1.4988e-01 insignificant 1.00000000 insignificant chr16 2759740 2760740 135221 SRRM2 ENSG00000167978 0.92637 201 7 0.71074 194 4 0.79684 189 4 0.92409 215 7 0.88329 113 4 0.87429 268 7 0.69798 123 4 0.93391 182 4 0.83735 185 4 0.85180 289 4 0.60711 159 4 0.72364 92 4 0.86284 240 4 0.91789 171 4 0.74352 287 4 0.72251 149 4 0.595238 20 3 0.84403 230 5 0.83276 303 6 0.74934 170 6 0.63636 44 4 0.67074 102 4 0.92710 119 6 0.88095 46 4 0.95685 69 4 0.84109 361 7 0.70985 113 4 0.52749 78 4 0.92725 203 4 0.59158 392 7 0.910613 339 6 0.84983 210 7 0.679152 230 4 0.9121241 84 4 1.0000000 153 4 0.879121 55 4 0.607573 120 4 0.712909 340 7 0.91736 210 7 0.94341 209 7 0.945451 169 7 0.98595 180 6 0.82794 197 7 0.90660 0.88764 0.79623 0.89466 0.88225 0.94833 0.87172 0.91707 0.83683 0.93952 0.91068 0.90394 0.86241 0.91773 0.86506 0.90256 0.654033 0.86816 0.91528 0.90434 0.95509 0.83856 0.87228 0.88102 0.95689 0.89330 0.88672 0.79030 0.92716 0.90778 0.90564 0.91167 0.848227 0.9120165 1.0000000 0.922150 0.911411 0.879823 0.912642 0.928657 0.904634 0.97541 0.93720 4 0.89071 0.89802 -0.00652430 4 0.78596 0.64000 0.14596200 0.2841331 0.8035500 lowCoverage 1 1.00000 lowCoverage 0.1422399 0.7582434 lowCoverage 1 1 lowCoverage 0.01596895 0.748386 lowCoverage 1 lowCoverage 0.89042 0.891039 0.00010829 4 0.68596 0.635249 0.0507138 4.5653e-01 0.46684 lowCoverage 1.0000e+00 1 lowCoverage 6.1091e-01 0.254244 lowCoverage 1.0000e+00 1 lowCoverage 0.0032973 9.6215e-01 lowCoverage 1.0000e+00 lowCoverage 0.89133 0.93361 -0.0380128 4 0.82620 0.82689 -0.00068969 7.6859e-01 1.2149e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.3277e-01 0.0324156 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1222434 5.0362e-03 lowCoverage 0.265066 lowCoverage 0.89845 0.891947 0.0075935 4 0.71111 0.705833 0.0052798 7.6089e-01 0.538379 lowCoverage 1.0000e+00 1 lowCoverage 9.4867e-01 0.272102 lowCoverage 1.0000e+00 1 lowCoverage -0.0126716 8.7126e-01 lowCoverage 1.0000e+00 lowCoverage 0.89976 0.93368 -0.02785588 4 0.71111 0.84613 -0.1350153 9.8434e-01 0.1194604 lowCoverage 1.0000e+00 1 lowCoverage 9.9766e-01 0.1704558 lowCoverage 1.0000e+00 1 lowCoverage -0.1382124 1.5564e-02 weaklyHypometh 0.7248823 insignificant 0.893769 0.93361 -0.036058 6 0.794062 0.82689 -0.0328320 0.779566 3.7036e-01 insignificant 1 1.0000e+00 insignificant 0.72535 5.6343e-01 insignificant 1 1.0000e+00 insignificant -0.12554073 1.0972e-01 lowCoverage 1.00000000 lowCoverage chr16 3361516 3362516 135226 ENSG00000209526 0.82738 198 6 0.70635 26 3 0.73981 36 3 0.84458 203 6 0.85714 20 0 0.79301 218 6 0.78571 21 1 0.68636 38 3 0.75000 25 3 0.61429 26 1 0.84749 86 6 1.00000 10 0 0.83177 82 3 NA 0 0 0.93304 25 3 NA 0 0 0.928571 18 0 0.77396 198 6 0.87175 48 6 0.70804 133 6 0.75000 20 0 0.83299 60 5 0.84192 78 6 0.65714 20 3 0.91667 54 6 0.84448 112 6 0.76577 50 3 0.66667 10 0 0.54000 36 3 0.90069 89 6 0.702381 126 6 0.72855 198 7 0.486111 40 4 0.6071429 52 3 0.8468821 100 6 0.625926 37 3 0.928571 19 0 0.736696 95 6 0.79207 156 6 0.81256 188 6 0.805291 179 6 0.85714 105 6 0.83846 189 6 0.92909 0.77591 0.80882 0.97670 1.00000 0.87985 0.98693 0.87879 0.99809 0.84804 0.86640 0.99809 0.91979 NA 0.91931 NA 1.000000 0.96921 0.92758 0.91116 0.85294 0.86368 0.94522 0.88235 0.91830 0.90913 0.87465 1.00000 0.89216 0.94402 0.95378 0.86715 0.616285 0.8884220 0.8401494 0.764706 1.000000 0.733524 0.935977 0.932613 0.941799 0.95168 0.95346 0 0.83841 0.81712 0.00214317 6 0.78938 0.76084 0.02854030 0.2540530 0.6697853 insignificant 1 1.00000 insignificant 0.3169034 0.4198828 insignificant 1 1 insignificant 0.04324265 0.284121 lowCoverage 1 lowCoverage 0.83841 0.746356 0.06423556 6 0.78938 0.724717 0.0646608 3.5361e-05 0.98450 weaklyHypermeth 4.5334e-04 1 weaklyHypermeth 4.6210e-03 0.999419 weaklyHypermeth 6.6015e-02 1 weaklyHypermeth 0.1002928 2.0500e-01 lowCoverage 1.0000e+00 lowCoverage 0.84037 0.83843 -0.0055961 6 0.81380 0.81530 -0.00150470 5.7055e-01 4.7377e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.7347e-01 0.7105056 insignificant 1.0000e+00 1.00000 insignificant -0.0155895 5.5062e-01 lowCoverage 1.000000 lowCoverage 0.81712 0.746356 0.0640506 6 0.76084 0.724717 0.0361205 5.5437e-03 0.975413 weaklyHypermeth 6.4462e-02 1 weaklyHypermeth 2.2129e-02 0.981687 weaklyHypermeth 2.6987e-01 1 insignificant 0.0570502 4.6654e-01 lowCoverage 1.0000e+00 lowCoverage 0.82283 0.83843 0.00083832 6 0.81820 0.81530 0.0028967 4.8526e-01 0.2469582 insignificant 1.0000e+00 1 insignificant 1.1884e-01 0.3622014 insignificant 1.0000e+00 1 insignificant -0.0588321 1.0766e-01 lowCoverage 1.0000000 lowCoverage 0.748521 0.83843 -0.062614 6 0.745503 0.81530 -0.0697995 0.936540 1.9469e-03 weaklyHypometh 1 3.1686e-02 weaklyHypometh 0.99631 8.3591e-02 insignificant 1 1.0000e+00 insignificant -0.11588229 1.4603e-01 lowCoverage 1.00000000 lowCoverage chr16 4253520 4254520 135230 SRL ENSG00000185739 0.78224 333 10 0.55456 387 12 0.61055 383 12 0.76740 390 9 0.75749 199 11 0.84749 466 10 0.81375 213 12 0.80695 301 10 0.75571 303 12 0.89029 373 10 0.80810 432 12 0.70063 191 11 0.70096 489 12 0.82424 218 8 0.78135 307 12 0.68567 113 8 0.622321 30 2 0.46008 575 8 0.65464 390 12 0.87230 253 10 0.71922 178 9 0.49159 183 6 0.78078 264 11 0.74106 236 11 0.60344 190 8 0.83320 405 12 0.71382 240 10 0.79999 147 9 0.81742 336 12 0.83934 460 12 0.735912 436 12 0.74635 310 11 0.070191 414 12 0.0947461 313 11 0.0028169 151 5 0.188889 86 8 0.180533 355 12 0.150173 450 12 0.82145 263 12 0.65678 333 8 0.737060 278 8 0.60623 270 8 0.78595 299 10 0.77250 0.61981 0.64210 0.81612 0.77686 0.84293 0.80132 0.80067 0.76344 0.87003 0.80198 0.68199 0.71556 0.81104 0.79298 0.55728 0.641532 0.49117 0.64043 0.85204 0.83062 0.52329 0.83813 0.73772 0.58436 0.86507 0.70562 0.77550 0.75853 0.85990 0.68962 0.79236 0.037402 0.0696565 0.0663443 0.072715 0.159200 0.109780 0.842626 0.656553 0.757837 0.57772 0.75889 6 0.73396 0.76337 -0.03243529 12 0.73144 0.76751 -0.03607257 0.9981473 0.0537553 insignificant 1 1.00000 insignificant 0.9293217 0.4094772 insignificant 1 1 insignificant -0.00034166 0.992931 insignificant 1 insignificant 0.73396 0.094969 0.63677833 12 0.73144 0.111180 0.6202593 1.9843e-86 1.00000 hypermethylated 1.9843e-83 1 hypermethylated 2.8403e-29 1.000000 hypermethylated 2.8403e-26 1 hypermethylated 0.6202773 6.2081e-10 hypermethylated 9.9327e-08 hypermethylated 0.73396 0.69508 0.0226905 9 0.73144 0.72508 0.00636429 1.7650e-01 3.9998e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.4394e-01 0.8100932 insignificant 1.0000e+00 1.00000 insignificant 0.0133425 7.8424e-01 insignificant 1.000000 insignificant 0.76337 0.094969 0.6719865 12 0.76751 0.111180 0.6563318 1.0473e-72 1.000000 hypermethylated 5.2366e-70 1 hypermethylated 6.5406e-23 1.000000 hypermethylated 6.5406e-20 1 hypermethylated 0.6206190 7.4591e-10 hypermethylated 9.3238e-08 hypermethylated 0.76337 0.69508 0.05724145 9 0.76751 0.72508 0.0424369 5.2196e-02 0.9183382 insignificant 1.0000e+00 1 insignificant 2.5198e-01 0.9340532 insignificant 1.0000e+00 1 insignificant 0.0136842 7.8816e-01 insignificant 1.0000000 insignificant 0.094969 0.69508 -0.596567 9 0.111180 0.72508 -0.6138950 1.000000 3.8481e-45 hypomethylated 1 3.8481e-42 hypomethylated 1.00000 7.8337e-15 hypomethylated 1 7.8337e-12 hypomethylated -0.60693479 2.5257e-06 hypomethylated 0.00062084 hypomethylated chr16 4306745 4307745 135231 GLIS2 ENSG00000126603 0.28658 534 18 0.26299 581 18 0.30033 593 19 0.30170 603 16 0.25622 417 18 0.40561 787 17 0.31642 565 18 0.28825 498 18 0.30220 676 18 0.27924 749 17 0.30762 624 19 0.25938 481 15 0.22646 624 17 0.31988 401 17 0.20166 551 18 0.15338 457 16 0.200823 262 10 0.19653 1063 17 0.14950 614 19 0.21323 661 18 0.35138 310 17 0.22158 434 16 0.28639 421 17 0.24111 284 13 0.26136 825 16 0.32356 784 19 0.35263 550 16 0.23113 235 13 0.28084 547 18 0.25787 691 19 0.283477 807 19 0.32149 642 19 0.039009 630 18 0.0051252 511 19 0.0147059 1151 16 0.017085 374 13 0.116910 419 16 0.019610 848 19 0.12233 628 17 0.11009 733 17 0.136281 466 17 0.21745 873 15 0.14478 570 17 0.21141 0.18663 0.22899 0.21148 0.17187 0.32289 0.19304 0.20658 0.15871 0.20742 0.28369 0.20467 0.12223 0.23294 0.15696 0.13670 0.236626 0.12121 0.13388 0.20048 0.29103 0.10023 0.20836 0.20238 0.20107 0.21650 0.19970 0.18166 0.24418 0.19229 0.15892 0.26063 0.021212 0.0070733 0.0331635 0.017835 0.086030 0.025583 0.067586 0.079633 0.086172 0.11853 0.10234 12 0.19042 0.22559 -0.01028375 19 0.25041 0.30310 -0.05268947 0.9639159 0.2022632 insignificant 1 1.00000 insignificant 0.6448257 0.6741485 insignificant 1 1 insignificant -0.02299985 0.237704 insignificant 1 insignificant 0.19037 0.027983 0.17575640 19 0.25043 0.088440 0.1619871 1.4812e-37 0.99994 weaklyHypermeth 1.2343e-35 1 weaklyHypermeth 1.0122e-22 1.000000 weaklyHypermeth 5.0611e-20 1 weaklyHypermeth 0.2259937 1.6261e-07 hypermethylated 1.0840e-05 hypermethylated 0.19035 0.10370 0.1056748 17 0.26297 0.13663 0.12633517 1.8912e-11 9.9921e-01 weaklyHypermeth 4.7279e-09 1.0000000 weaklyHypermeth 9.4173e-11 0.9996271 weaklyHypermeth 3.1391e-08 1.00000 weaklyHypermeth 0.1152153 7.9721e-04 weaklyHypermeth 0.149890 insignificant 0.22559 0.027728 0.2024334 19 0.30930 0.042985 0.2663140 1.2502e-42 1.000000 hypermethylated 1.7860e-40 1 hypermethylated 1.3925e-18 1.000000 hypermethylated 4.6415e-16 1 hypermethylated 0.2489936 1.7338e-07 hypermethylated 1.3337e-05 hypermethylated 0.22551 0.10367 0.12064673 17 0.30022 0.13013 0.1700902 8.4217e-14 0.9991899 weaklyHypermeth 1.6843e-11 1 weaklyHypermeth 6.1033e-08 0.9996016 weaklyHypermeth 2.0344e-05 1 weaklyHypermeth 0.1382151 2.9732e-04 weaklyHypermeth 0.0991070 weaklyHypermeth 0.027742 0.10367 -0.083978 17 0.045032 0.13013 -0.0850958 1.000000 6.0046e-16 weaklyHypometh 1 6.6718e-14 weaklyHypometh 1.00000 1.3041e-09 weaklyHypometh 1 3.2603e-07 weaklyHypometh -0.11077845 1.9665e-03 weaklyHypometh 0.06145435 weaklyHypometh chr16 4307428 4308428 135232 GLIS2 ENSG00000126603 0.74758 187 6 0.64617 197 7 0.78743 160 6 0.72239 240 6 0.80777 98 6 0.88720 306 6 0.79084 161 7 0.71683 197 7 0.64763 215 6 0.79746 171 4 0.75166 237 7 0.82521 100 4 0.69231 219 6 0.73437 127 6 0.77557 139 6 0.54724 83 4 0.527232 40 4 0.56068 309 6 0.58569 161 6 0.57933 204 6 0.86307 107 6 0.61646 133 6 0.67969 148 6 0.60987 117 7 0.68869 170 6 0.70367 267 6 0.74832 160 4 0.74453 95 4 0.81474 189 6 0.84157 247 6 0.733790 255 6 0.70602 263 6 0.074055 238 6 0.0617308 139 6 0.0458333 258 5 0.071429 47 3 0.129044 196 6 0.166498 306 6 0.26029 185 6 0.27683 212 6 0.436969 138 5 0.50642 167 6 0.44187 206 6 0.65881 0.54918 0.61539 0.71124 0.72019 0.78292 0.67597 0.66228 0.58310 0.69790 0.76438 0.60902 0.45537 0.73779 0.66036 0.49382 0.370589 0.41957 0.39515 0.62432 0.76984 0.37180 0.69510 0.54061 0.60214 0.67699 0.62510 0.77478 0.72792 0.66856 0.59652 0.77099 0.041311 0.0514820 0.1181180 0.036675 0.135440 0.072962 0.209390 0.182217 0.312935 0.36859 0.35169 4 0.63954 0.68526 -0.03596359 6 0.65634 0.68282 -0.02648180 0.9803813 0.3077130 insignificant 1 1.00000 insignificant 0.7670039 0.4189505 insignificant 1 1 insignificant -0.02267186 0.495227 insignificant 1 insignificant 0.63977 0.076014 0.57356949 6 0.70100 0.085536 0.6154681 7.8359e-46 1.00000 hypermethylated 7.8359e-44 1 hypermethylated 8.4414e-18 1.000000 hypermethylated 1.6883e-15 1 hypermethylated 0.6150975 9.0101e-15 hypermethylated 2.2525e-12 hypermethylated 0.63977 0.28744 0.3479490 6 0.70100 0.32609 0.37491414 1.6006e-18 1.0000e+00 hypermethylated 8.0029e-16 1.0000000 hypermethylated 6.1635e-13 1.0000000 hypermethylated 3.0817e-10 1.00000 hypermethylated 0.3220535 1.0492e-03 weaklyHypermeth 0.149890 insignificant 0.68514 0.076014 0.6160326 6 0.73505 0.085536 0.6495161 1.4272e-39 1.000000 hypermethylated 1.5858e-37 1 hypermethylated 8.1637e-15 1.000000 hypermethylated 1.6327e-12 1 hypermethylated 0.6377693 6.9531e-13 hypermethylated 3.4766e-10 hypermethylated 0.68514 0.28744 0.37804769 6 0.73505 0.32609 0.4089622 4.9164e-18 1.0000000 hypermethylated 1.6388e-15 1 hypermethylated 2.0280e-10 1.0000000 hypermethylated 1.0140e-07 1 hypermethylated 0.3447253 7.6273e-04 hypermethylated 0.1906833 insignificant 0.076014 0.28744 -0.235573 6 0.085536 0.32609 -0.2405539 0.999760 4.0854e-11 hypomethylated 1 2.9182e-09 hypomethylated 0.99999 6.6369e-07 hypomethylated 1 6.6369e-05 hypomethylated -0.29304400 2.2555e-03 weaklyHypometh 0.06580164 weaklyHypometh chr16 4307962 4308962 135233 GLIS2 ENSG00000126603 0.69847 314 10 0.62357 283 11 0.72303 226 9 0.68560 351 10 0.70209 132 10 0.69545 446 10 0.66586 177 11 0.66514 242 11 0.66690 277 10 0.68924 232 10 0.77946 347 11 0.47155 116 8 0.59906 365 9 0.70451 135 7 0.63399 191 9 0.57978 84 6 0.395755 85 7 0.46962 443 10 0.56742 168 10 0.60827 351 10 0.81981 173 10 0.40084 244 9 0.75281 287 10 0.66408 193 11 0.65791 186 9 0.65845 354 10 0.67430 246 10 0.67720 96 8 0.67330 195 9 0.66120 386 10 0.663949 315 10 0.73966 439 10 0.131663 383 10 0.1507194 174 9 0.1683304 347 9 0.079365 82 7 0.266125 199 10 0.165922 375 10 0.23712 317 10 0.18752 402 10 0.247127 243 9 0.22416 217 8 0.37934 270 10 0.64899 0.49111 0.57602 0.65960 0.62734 0.64980 0.62814 0.61602 0.55871 0.64815 0.76102 0.38414 0.43649 0.70074 0.56352 0.49029 0.240355 0.40043 0.39735 0.56758 0.73795 0.31400 0.62488 0.52105 0.54031 0.61414 0.60169 0.70567 0.63695 0.55332 0.54944 0.78041 0.089856 0.0927204 0.1898731 0.055012 0.225414 0.079524 0.169133 0.132404 0.199381 0.22898 0.28207 8 0.59460 0.62877 -0.03056124 10 0.59195 0.70646 -0.11451170 0.9925933 0.0962898 insignificant 1 1.00000 insignificant 0.9926639 0.2046192 insignificant 1 1 insignificant -0.03905368 0.284847 insignificant 1 insignificant 0.59472 0.129487 0.45604077 10 0.64577 0.165608 0.4801578 1.0555e-54 1.00000 hypermethylated 1.5078e-52 1 hypermethylated 1.6795e-22 1.000000 hypermethylated 5.5985e-20 1 hypermethylated 0.4708841 2.0884e-09 hypermethylated 2.6106e-07 hypermethylated 0.59472 0.18703 0.3845810 10 0.64577 0.23577 0.40999832 4.0523e-37 1.0000e+00 hypermethylated 4.0523e-34 1.0000000 hypermethylated 3.0874e-16 1.0000000 hypermethylated 3.0874e-13 1.00000 hypermethylated 0.3761860 1.2480e-05 hypermethylated 0.012480 hypermethylated 0.62830 0.129487 0.4879397 10 0.67978 0.165608 0.5141706 1.1485e-43 1.000000 hypermethylated 1.9142e-41 1 hypermethylated 3.9923e-21 1.000000 hypermethylated 1.9962e-18 1 hypermethylated 0.5099377 9.2972e-10 hypermethylated 1.0330e-07 hypermethylated 0.62830 0.18703 0.41865962 10 0.67978 0.23577 0.4440111 3.5977e-31 1.0000000 hypermethylated 1.7989e-28 1 hypermethylated 3.9196e-17 1.0000000 hypermethylated 3.9196e-14 1 hypermethylated 0.4152397 1.9641e-06 hypermethylated 0.0019641 hypermethylated 0.129487 0.18703 -0.060327 10 0.165608 0.23577 -0.0701595 0.858937 2.4597e-04 weaklyHypometh 1 5.2334e-03 weaklyHypometh 0.98450 1.6256e-02 weaklyHypometh 1 2.7093e-01 insignificant -0.09469806 5.0756e-02 insignificant 0.73560020 insignificant chr16 4362717 4363717 135235 VASN ENSG00000168140 0.51177 234 8 0.57549 297 8 0.51383 243 8 0.51411 146 6 0.56784 176 6 0.53973 283 8 0.45182 266 8 0.54348 230 8 0.52749 283 8 0.47718 241 8 0.55840 263 8 0.46671 155 6 0.42425 266 8 0.60833 23 1 0.45137 209 8 0.45198 111 5 0.531103 149 8 0.55039 164 5 0.52444 185 8 0.41955 237 8 0.71106 167 8 0.46352 144 7 0.58574 176 8 0.50970 134 8 0.48128 175 6 0.45848 340 8 0.49939 125 7 0.54471 80 7 0.59469 185 8 0.46860 339 8 0.520098 341 8 0.63788 317 8 0.038912 269 8 0.0129796 297 8 0.0000000 111 2 0.000000 98 8 0.023757 135 8 0.020539 381 8 0.46789 211 8 0.48982 280 8 0.453510 176 6 0.43744 249 8 0.40329 212 8 0.46808 0.54919 0.51760 0.48038 0.44710 0.57816 0.45322 0.48578 0.51807 0.44683 0.51300 0.43328 0.39341 0.51682 0.41293 0.38971 0.432226 0.51531 0.48302 0.43873 0.71630 0.40944 0.58129 0.53002 0.47716 0.43656 0.42060 0.47351 0.56621 0.43874 0.48463 0.61937 0.045944 0.0130556 0.0038104 0.000000 0.023185 0.065712 0.443056 0.415649 0.416765 0.36577 0.33393 4 0.48749 0.50178 -0.02425151 8 0.51920 0.53981 -0.02061154 0.9564722 0.2763484 insignificant 1 1.00000 insignificant 0.8820925 0.2352503 insignificant 1 1 insignificant -0.02913266 0.270426 insignificant 1 insignificant 0.48702 0.030209 0.45026797 8 0.46151 0.018917 0.4425966 1.5719e-57 1.00000 hypermethylated 2.6199e-55 1 hypermethylated 3.9650e-18 1.000000 hypermethylated 9.9125e-16 1 hypermethylated 0.4944325 9.9811e-23 hypermethylated 3.3270e-20 hypermethylated 0.48749 0.34574 0.0817928 8 0.51920 0.45100 0.06820748 2.1350e-05 9.1952e-01 weaklyHypermeth 1.4233e-03 1.0000000 weaklyHypermeth 1.8359e-03 0.9735961 weaklyHypermeth 1.1474e-01 1.00000 insignificant 0.0600718 9.4233e-03 weaklyHypermeth 0.428333 insignificant 0.50178 0.030233 0.4741290 8 0.53981 0.021281 0.5185327 2.2057e-48 1.000000 hypermethylated 4.4113e-46 1 hypermethylated 3.8177e-17 1.000000 hypermethylated 9.5442e-15 1 hypermethylated 0.5235651 1.8997e-11 hypermethylated 4.3500e-09 hypermethylated 0.50178 0.34574 0.10965280 8 0.53981 0.45100 0.0888190 4.3344e-06 0.9735825 weaklyHypermeth 4.3344e-04 1 weaklyHypermeth 1.9343e-03 0.9947837 weaklyHypermeth 1.4879e-01 1 insignificant 0.0892045 4.8082e-03 weaklyHypermeth 0.4472232 insignificant 0.030233 0.34574 -0.326664 8 0.021281 0.45100 -0.4297137 1.000000 5.5722e-31 hypomethylated 1 2.7861e-28 hypomethylated 1.00000 6.0820e-12 hypomethylated 1 3.0410e-09 hypomethylated -0.43436067 5.2043e-07 hypomethylated 0.00026021 hypomethylated chr16 4363550 4364550 135236 VASN ENSG00000168140 0.61757 74 4 0.46799 102 4 0.37271 124 4 0.57045 50 4 0.48991 86 4 0.50503 105 6 0.57659 148 6 0.66020 94 6 0.44627 116 6 0.62811 102 4 0.56269 155 6 0.68389 115 4 0.57450 97 4 0.38889 7 0 0.56506 87 4 0.41415 88 4 0.764610 85 4 0.53333 34 2 0.52994 63 4 0.39646 103 6 0.56549 95 4 0.54762 37 3 0.44520 82 6 0.71268 81 4 0.56909 50 4 0.57758 139 6 0.69174 69 6 0.61944 51 4 0.56166 34 4 0.61661 109 4 0.401141 130 4 0.72481 138 6 0.016962 127 6 0.0072464 110 6 0.0000000 12 0 0.000000 64 6 0.179720 101 6 0.023006 168 6 0.50923 85 4 0.52250 106 6 0.431439 47 4 0.54289 58 4 0.39872 73 6 0.66122 0.68425 0.62257 0.69759 0.65492 0.78921 0.70493 0.72940 0.64945 0.74450 0.78706 0.73888 0.59177 0.65404 0.67365 0.61053 0.721158 0.71088 0.66598 0.61465 0.78041 0.66327 0.67464 0.74027 0.64925 0.62237 0.72939 0.76259 0.76093 0.64153 0.65282 0.74003 0.024035 0.0053239 0.0098759 0.000000 0.078312 0.014339 0.542076 0.553934 0.666729 0.65514 0.49890 2 0.68890 0.68867 -0.00633957 4 0.47662 0.58489 -0.10827048 0.9718641 0.5271510 lowCoverage 1 1.00000 lowCoverage 0.9342603 0.6986115 lowCoverage 1 1 lowCoverage -0.04867036 0.197187 lowCoverage 1 lowCoverage 0.68740 0.027539 0.66235778 4 0.42896 0.034863 0.3940949 2.0976e-41 1.00000 lowCoverage 1.9069e-39 1 lowCoverage 5.5897e-10 1.000000 lowCoverage 4.6580e-08 1 lowCoverage 0.4995963 8.1418e-09 lowCoverage 8.1418e-07 lowCoverage 0.69058 0.52575 0.1036841 4 0.58773 0.38995 0.19778349 5.9740e-04 9.8981e-01 lowCoverage 2.2977e-02 1.0000000 lowCoverage 9.9364e-03 0.9974818 lowCoverage 3.8217e-01 1.00000 lowCoverage 0.0564656 1.5085e-01 lowCoverage 1.000000 lowCoverage 0.68867 0.027586 0.6636851 4 0.58489 0.038737 0.5461537 4.6545e-35 1.000000 lowCoverage 4.6545e-33 1 lowCoverage 2.4359e-09 1.000000 lowCoverage 2.0299e-07 1 lowCoverage 0.5482666 2.5403e-09 lowCoverage 2.3094e-07 lowCoverage 0.69071 0.52717 0.11977746 4 0.65800 0.43869 0.2193107 1.1884e-04 0.9907735 lowCoverage 9.8909e-03 1 lowCoverage 7.9880e-03 0.9943376 lowCoverage 4.3011e-01 1 lowCoverage 0.1051359 2.1451e-02 lowCoverage 0.8992194 lowCoverage 0.027682 0.52717 -0.491511 6 0.043579 0.43869 -0.3951122 0.995053 3.3256e-23 hypomethylated 1 5.5426e-21 hypomethylated 0.99902 2.7902e-07 hypomethylated 1 3.9860e-05 hypomethylated -0.44313070 1.6052e-06 lowCoverage 0.00053507 lowCoverage chr16 4375755 4376755 135237 VASN ENSG00000168140 0.84074 192 5 0.80717 178 5 0.73835 107 5 0.82855 129 3 0.85280 86 5 0.79865 169 5 0.86444 142 5 0.88464 101 5 0.81807 94 5 0.91570 84 5 0.82498 177 5 0.78957 88 5 0.79596 117 5 0.86667 52 2 0.69721 130 5 0.81556 74 5 0.825292 62 3 0.77322 286 3 0.84972 255 5 0.86509 185 5 0.88236 105 5 0.63810 44 4 0.77776 118 5 0.96190 73 5 0.81481 37 2 0.73537 199 5 0.75383 137 5 0.95697 57 5 0.82043 245 5 0.87899 174 5 0.855671 198 5 0.93970 233 5 0.043059 178 5 0.0325000 208 5 0.1746032 129 5 0.166667 23 2 0.073716 120 5 0.026312 242 5 0.78496 127 5 0.73937 164 5 0.904444 102 3 0.61389 150 5 0.69217 127 3 0.89318 0.81421 0.78546 0.89592 0.83807 0.90608 0.82675 0.91581 0.79365 0.91666 0.82994 0.82943 0.83765 0.84387 0.72208 0.73457 0.817288 0.72204 0.87635 0.89480 0.84720 0.74912 0.90572 0.97972 0.79957 0.88530 0.73576 0.96866 0.83595 0.89814 0.86516 0.90295 0.063125 0.0501543 0.0146972 0.046514 0.090071 0.052930 0.832634 0.778101 0.871742 0.64875 0.73098 3 0.82570 0.85484 -0.03316361 5 0.76896 0.84712 -0.07815608 0.9885243 0.1111955 insignificant 1 1.00000 insignificant 0.9531925 0.1190190 insignificant 1 1 insignificant -0.01203745 0.698360 lowCoverage 1 lowCoverage 0.82570 0.055056 0.77170975 5 0.76896 0.059891 0.7090700 4.8071e-58 1.00000 hypermethylated 9.6142e-56 1 hypermethylated 3.5041e-13 1.000000 hypermethylated 3.8934e-11 1 hypermethylated 0.7364771 7.0410e-08 lowCoverage 5.0293e-06 lowCoverage 0.82594 0.78743 0.0413127 5 0.82275 0.71930 0.10344999 2.1629e-04 9.8766e-01 weaklyHypermeth 9.4040e-03 1.0000000 weaklyHypermeth 5.7039e-03 0.9841869 weaklyHypermeth 2.8520e-01 1.00000 insignificant 0.0756554 1.9616e-01 lowCoverage 1.000000 lowCoverage 0.85370 0.057778 0.7995458 5 0.79367 0.119918 0.6737529 5.6880e-49 0.999998 hypermethylated 1.4220e-46 1 hypermethylated 3.6842e-11 1.000000 hypermethylated 4.0936e-09 1 hypermethylated 0.7485146 2.1750e-11 lowCoverage 4.3500e-09 lowCoverage 0.85422 0.78774 0.07283740 5 0.81378 0.76609 0.0476977 2.4583e-04 0.9844173 weaklyHypermeth 1.4485e-02 1 weaklyHypermeth 1.0645e-02 0.9956352 weaklyHypermeth 4.4355e-01 1 insignificant 0.0876929 1.6287e-01 lowCoverage 1.0000000 lowCoverage 0.057368 0.78774 -0.720807 5 0.132113 0.76609 -0.6339728 0.999993 9.7822e-26 hypomethylated 1 2.4456e-23 hypomethylated 1.00000 1.7773e-07 hypomethylated 1 2.9622e-05 hypomethylated -0.66082167 1.2715e-05 lowCoverage 0.00179543 lowCoverage chr16 5237775 5238775 135251 FAM86A ENSG00000118894 0.87506 158 5 0.81944 160 5 0.61223 159 5 0.83697 198 5 0.81333 90 5 0.80165 167 5 0.77045 73 5 0.79114 185 5 0.74848 103 5 0.79561 172 5 0.85121 266 5 0.54736 47 4 0.92973 199 3 0.72549 130 4 0.70792 161 4 0.86376 87 3 0.000000 1 0 0.86836 227 5 0.93570 253 5 0.86479 130 5 0.84952 51 4 0.88282 77 4 0.80673 70 5 0.75556 45 4 0.75599 65 4 0.80880 264 5 0.85245 259 4 0.79848 50 4 0.83701 241 5 0.89471 262 5 0.849778 231 5 0.77769 148 5 0.405766 124 5 0.3200142 98 5 0.2225564 92 5 0.343750 25 3 0.276724 121 5 0.458946 162 5 0.80852 74 5 0.78188 189 5 0.752510 176 5 0.92564 76 3 0.77851 169 5 0.90559 0.86633 0.59490 0.88113 0.88499 0.87835 0.81836 0.85639 0.80748 0.88183 0.89639 0.54730 0.89077 0.86260 0.86649 0.93305 NA 0.86825 0.90023 0.92641 0.83341 0.81963 0.84373 0.96430 0.81674 0.89218 0.84804 0.94101 0.90773 0.90841 0.92182 0.89832 0.310645 0.1180870 0.0499439 0.432633 0.303106 0.362705 0.892469 0.818472 0.823580 0.88459 0.79793 3 0.85334 0.87635 -0.02025776 5 0.81464 0.81247 0.00217174 0.6286821 0.2486297 insignificant 1 1.00000 insignificant 0.6339171 0.3869287 insignificant 1 1 insignificant -0.06452573 0.185422 lowCoverage 1 lowCoverage 0.85334 0.320451 0.53667930 5 0.81464 0.365735 0.4489075 1.2038e-34 0.99997 hypermethylated 8.5989e-33 1 hypermethylated 1.4351e-10 0.999707 hypermethylated 1.3047e-08 1 hypermethylated 0.4199745 3.5788e-07 lowCoverage 2.2367e-05 lowCoverage 0.85334 0.81433 0.0288715 5 0.81464 0.78630 0.02833756 8.4504e-02 9.0004e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9013e-01 0.6914969 insignificant 1.0000e+00 1.00000 insignificant -0.0514778 3.5633e-01 lowCoverage 1.000000 lowCoverage 0.87635 0.320451 0.5551778 5 0.81247 0.365735 0.4467358 1.1136e-28 0.995851 hypermethylated 7.9541e-27 1 hypermethylated 1.7763e-10 0.996748 hypermethylated 1.7763e-08 1 hypermethylated 0.4845003 7.0402e-06 lowCoverage 4.4001e-04 lowCoverage 0.87635 0.81433 0.04837568 5 0.81247 0.78630 0.0261658 4.9986e-03 0.8949087 weaklyHypermeth 1.7237e-01 1 insignificant 1.2586e-01 0.6909740 insignificant 1.0000e+00 1 insignificant 0.0130480 7.0853e-01 lowCoverage 1.0000000 lowCoverage 0.320451 0.81433 -0.501267 5 0.365735 0.78630 -0.4205699 0.999651 3.1817e-13 hypomethylated 1 2.6514e-11 hypomethylated 0.99996 4.7405e-07 hypomethylated 1 5.2672e-05 hypomethylated -0.47145228 3.1042e-06 lowCoverage 0.00062084 lowCoverage chr16 5242272 5243272 135252 FAM86A ENSG00000118894 0.55843 97 3 0.48168 150 5 0.47452 80 5 0.30383 78 3 0.31029 56 5 0.35821 134 3 0.29312 137 5 0.37919 69 5 0.31612 44 2 0.70566 40 2 0.38035 130 5 0.26061 39 2 0.35621 55 2 1.00000 3 0 0.32733 55 3 0.39040 37 2 0.335439 54 3 0.63608 59 3 0.45538 39 2 0.30446 110 3 0.23512 52 3 0.73750 31 2 0.50260 69 3 0.29298 53 5 0.36508 43 4 0.19436 153 5 0.27203 48 4 0.43420 47 3 0.56863 39 3 0.23186 135 5 0.244929 146 5 0.41303 107 3 0.248687 108 5 0.3225564 53 2 0.1314815 174 5 0.574057 85 3 0.328225 120 5 0.600931 64 5 0.29514 167 3 0.28953 161 3 0.302316 152 3 0.63374 77 2 0.36422 237 5 0.69300 0.56641 0.60149 0.61721 0.52428 0.72259 0.53701 0.59904 0.60975 0.72117 0.63237 0.62328 0.50910 0.75666 0.47007 0.59999 0.481605 0.73784 0.65242 0.60826 0.62275 0.72266 0.67041 0.44557 0.78657 0.37493 0.55285 0.70583 0.59776 0.46702 0.52351 0.71480 0.525332 0.5530373 0.3150813 0.638931 0.446195 0.616371 0.471172 0.532879 0.501986 0.69071 0.57458 2 0.52524 0.47021 0.03417005 3 0.52831 0.21316 0.31514543 0.2468383 0.9965672 lowCoverage 1 1.00000 lowCoverage 0.0797890 0.9539178 lowCoverage 1 1 lowCoverage 0.05700536 0.367160 lowCoverage 1 lowCoverage 0.52427 0.390728 0.10476432 3 0.33963 0.320152 0.0194822 1.3766e-02 0.38645 lowCoverage 1.4340e-01 1 lowCoverage 2.3012e-01 0.217000 lowCoverage 1.0000e+00 1 lowCoverage 0.0637093 4.7666e-01 lowCoverage 1.0000e+00 lowCoverage 0.52427 0.46348 0.0546981 3 0.33963 0.32184 0.01779461 1.5891e-01 5.8451e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 5.8093e-01 0.3890939 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0543778 5.0093e-01 lowCoverage 1.000000 lowCoverage 0.47277 0.390728 0.0662506 5 0.29843 0.320152 -0.0217214 3.1026e-01 0.064516 insignificant 1.0000e+00 1 insignificant 4.8391e-01 0.055267 insignificant 1.0000e+00 1 insignificant 0.0067040 9.4164e-01 lowCoverage 1.0000e+00 lowCoverage 0.47277 0.46348 0.03114505 3 0.29843 0.32184 -0.0234090 7.1867e-01 0.0418841 lowCoverage 1.0000e+00 1 lowCoverage 4.9061e-01 0.1292329 lowCoverage 1.0000e+00 1 lowCoverage -0.0026276 9.7486e-01 lowCoverage 1.0000000 lowCoverage 0.390728 0.46348 -0.045053 3 0.320152 0.32184 -0.0016876 0.794281 3.3955e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.78186 6.5794e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.00933157 9.2764e-01 lowCoverage 1.00000000 lowCoverage chr16 9157511 9158511 135716 ENSG00000220793 0.76373 124 4 0.68976 260 5 0.42722 75 5 0.91477 131 4 0.78202 79 3 0.93059 237 5 0.52222 33 3 0.78074 170 5 0.73421 96 5 0.79636 104 5 0.80873 260 5 0.70619 69 3 0.74307 141 5 0.70897 110 4 0.72567 118 5 0.71569 56 1 0.325000 50 2 0.81937 215 4 0.75509 245 5 0.87366 154 5 0.88352 62 4 0.77745 85 4 0.84727 74 5 0.74800 86 5 0.87662 52 4 0.84198 231 5 0.71938 101 5 0.78214 28 3 0.79925 216 5 0.87358 267 5 0.803004 240 4 0.87158 153 5 0.641322 214 5 0.6652174 73 3 0.6996658 141 5 0.500000 6 0 0.704527 157 5 0.903923 178 5 0.87333 60 2 0.89424 166 4 0.900030 111 4 0.93652 66 4 0.88028 101 4 0.78503 0.73541 0.44516 0.84754 0.85445 0.94094 0.62094 0.82237 0.70194 0.85838 0.82170 0.69939 0.83039 0.80195 0.78431 0.73479 0.494093 0.83246 0.80282 0.88916 0.88286 0.80471 0.84346 0.67424 0.91156 0.89209 0.78512 0.76612 0.85468 0.88450 0.82190 0.86999 0.758326 0.7466974 0.5924583 0.692722 0.768461 0.933566 0.891150 0.855125 0.868934 0.92764 0.88747 2 0.75761 0.86082 -0.05033557 5 0.74084 0.82160 -0.08075426 0.9985928 0.0014085 weaklyHypometh 1 0.70427 insignificant 0.9965902 0.0057385 weaklyHypometh 1 1 insignificant -0.09249524 0.018761 lowCoverage 1 lowCoverage 0.75761 0.773732 0.01172922 5 0.74084 0.729986 0.0108575 4.1688e-01 0.66289 insignificant 1.0000e+00 1 insignificant 5.1892e-01 0.804011 insignificant 1.0000e+00 1 insignificant 0.0403775 5.3588e-01 lowCoverage 1.0000e+00 lowCoverage 0.75761 0.85714 -0.0329991 4 0.74084 0.90474 -0.16389120 8.8652e-01 3.2347e-06 lowCoverage 1.0000e+00 0.0032347 lowCoverage 9.3210e-01 0.0026564 lowCoverage 1.0000e+00 0.53128 lowCoverage -0.1707267 7.2326e-05 lowCoverage 0.024109 lowCoverage 0.86082 0.773732 0.0710216 5 0.82160 0.729986 0.0916118 2.3032e-02 0.988731 weaklyHypermeth 2.4245e-01 1 insignificant 7.4625e-02 0.979643 insignificant 8.3848e-01 1 insignificant 0.1328727 5.4561e-02 lowCoverage 7.1791e-01 lowCoverage 0.86082 0.85714 0.01152581 4 0.82160 0.90474 -0.0831369 4.3926e-01 0.0021358 lowCoverage 1.0000e+00 1 lowCoverage 3.3148e-01 0.0060774 lowCoverage 1.0000e+00 1 lowCoverage -0.0782315 1.0768e-03 lowCoverage 0.2127529 lowCoverage 0.773732 0.85714 -0.043638 4 0.729986 0.90474 -0.1747487 0.992315 6.1789e-04 lowCoverage 1 1.1882e-02 lowCoverage 0.99306 8.0913e-03 lowCoverage 1 1.5060e-01 lowCoverage -0.21110419 9.9139e-03 lowCoverage 0.20974158 lowCoverage chr16 10246155 10247155 135762 ENSG00000222479 0.81360 126 3 0.71645 179 6 0.66205 190 6 0.94494 80 3 0.77689 138 6 0.80826 157 6 0.75495 141 6 0.79297 140 6 0.80974 131 6 0.82696 90 6 0.87379 208 6 0.86389 39 4 0.75454 161 6 0.84904 47 3 0.77982 94 6 0.70635 45 5 0.878788 36 3 0.81818 79 2 0.78159 101 5 0.81870 163 6 0.89971 65 5 0.58306 75 6 0.87469 84 3 0.89732 69 4 0.95833 31 2 0.77659 187 6 0.80624 57 5 0.72121 47 5 0.77537 112 4 0.60207 182 6 0.781728 185 6 0.88361 186 6 0.143667 229 6 0.0976852 77 5 0.0000000 85 4 0.074074 17 1 0.196343 135 6 0.292123 258 6 0.77650 98 4 0.70663 115 2 0.443408 80 1 0.89744 97 3 0.65960 117 6 0.85960 0.74209 0.72019 0.94132 0.83444 0.83445 0.79004 0.82336 0.80599 0.86019 0.88501 0.83974 0.79490 0.85987 0.82143 0.73043 0.772684 0.85548 0.83214 0.84429 0.90990 0.66896 0.92678 0.85388 0.96795 0.82327 0.80869 0.80660 0.82378 0.69201 0.81634 0.88408 0.161112 0.1278490 0.0150045 0.170940 0.278655 0.321756 0.832238 0.760916 0.570258 0.72226 0.69567 1 0.81535 0.85156 -0.02679869 6 0.78778 0.80679 -0.01901331 0.9494867 0.1883112 insignificant 1 1.00000 insignificant 0.8781615 0.3141190 insignificant 1 1 insignificant 0.00491311 0.895628 lowCoverage 1 lowCoverage 0.81535 0.189763 0.62904470 6 0.78778 0.167132 0.6206461 1.2617e-53 1.00000 hypermethylated 1.5772e-51 1 hypermethylated 5.7080e-16 1.000000 hypermethylated 9.5133e-14 1 hypermethylated 0.6675923 3.4889e-06 lowCoverage 1.9383e-04 lowCoverage 0.81535 0.85010 0.0337187 3 0.78778 0.68170 0.10607817 4.8373e-04 7.2660e-01 lowCoverage 1.9349e-02 1.0000000 lowCoverage 9.4162e-03 0.9492088 lowCoverage 3.7665e-01 1.00000 lowCoverage 0.1048602 2.3672e-01 lowCoverage 1.000000 lowCoverage 0.85156 0.189763 0.6697639 6 0.80679 0.167132 0.6396594 7.3312e-34 1.000000 hypermethylated 6.5070e-32 1 hypermethylated 1.0460e-12 1.000000 hypermethylated 1.7434e-10 1 hypermethylated 0.6626792 5.3423e-08 lowCoverage 4.4519e-06 lowCoverage 0.85156 0.85010 0.05888261 3 0.80679 0.68170 0.1250915 1.0035e-02 0.9056171 lowCoverage 3.1300e-01 1 lowCoverage 3.5976e-02 0.9898470 lowCoverage 1.0000e+00 1 lowCoverage 0.0999470 2.7193e-01 lowCoverage 1.0000000 lowCoverage 0.189763 0.85010 -0.596733 3 0.167132 0.68170 -0.5145679 1.000000 1.3106e-15 lowCoverage 1 1.3106e-13 lowCoverage 1.00000 8.1202e-06 lowCoverage 1 6.2463e-04 lowCoverage -0.56273213 4.7030e-04 lowCoverage 0.02239516 lowCoverage chr16 14310183 14311183 135877 MIR365-1 ENSG00000199130 0.37017 325 5 0.26929 271 5 0.48709 215 5 0.32862 423 5 0.26975 176 7 0.41429 418 5 0.39153 206 5 0.36264 286 5 0.36009 313 5 0.36848 143 5 0.35734 283 5 0.33911 72 5 0.59463 350 5 0.35414 158 5 0.48564 253 5 0.55762 69 5 0.451272 104 5 0.27975 469 5 0.43441 192 5 0.38856 313 5 0.30581 79 4 0.31305 251 5 0.34195 261 5 0.34820 138 5 0.33716 168 5 0.40187 334 5 0.32056 219 5 0.46782 117 5 0.42375 245 5 0.42631 297 7 0.396438 310 5 0.35116 409 5 0.079494 290 5 0.5552011 130 5 NA 0 0 0.244463 69 5 0.385669 173 5 0.141896 299 5 0.49191 433 5 0.36995 389 5 0.228161 448 5 0.35020 339 5 0.31342 384 5 0.32727 0.29408 0.39596 0.35692 0.34631 0.43346 0.39314 0.34721 0.32560 0.33630 0.41979 0.42935 0.53266 0.35892 0.43381 0.45618 0.441606 0.30677 0.48285 0.37879 0.37829 0.33457 0.37450 0.47204 0.29468 0.43384 0.42498 0.33037 0.36881 0.56811 0.45427 0.38112 0.094062 0.5420899 NA 0.206496 0.417324 0.145379 0.434845 0.410234 0.315653 0.36179 0.40460 5 0.36239 0.38623 -0.02566181 5 0.33738 0.34835 -0.01097083 0.9400752 0.2011976 insignificant 1 1.00000 insignificant 0.9077748 0.3723554 insignificant 1 1 insignificant 0.02371384 0.345850 insignificant 1 insignificant 0.36297 0.222917 0.13529672 5 0.38558 0.243862 0.1417181 2.9680e-07 0.99897 weaklyHypermeth 4.4299e-06 1 weaklyHypermeth 4.5479e-03 0.995945 weaklyHypermeth 6.6015e-02 1 weaklyHypermeth 0.1118758 2.6668e-01 lowCoverage 1.0000e+00 lowCoverage 0.36237 0.42047 0.0023904 5 0.33693 0.23939 0.09754280 4.6421e-01 8.7804e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.9365e-01 0.9700612 insignificant 1.0000e+00 1.00000 insignificant 0.0424929 4.0326e-01 insignificant 1.000000 insignificant 0.38562 0.222685 0.1611772 5 0.35972 0.213380 0.1463378 3.3845e-06 0.998466 weaklyHypermeth 5.5483e-05 1 weaklyHypermeth 5.0791e-03 0.991083 weaklyHypermeth 7.6957e-02 1 weaklyHypermeth 0.0881619 3.6590e-01 lowCoverage 1.0000e+00 lowCoverage 0.38623 0.42068 0.02858911 5 0.34835 0.26931 0.0790398 7.3905e-02 0.9255194 insignificant 1.0000e+00 1 insignificant 1.0294e-01 0.9299623 insignificant 1.0000e+00 1 insignificant 0.0187790 6.9628e-01 insignificant 1.0000000 insignificant 0.222917 0.42111 -0.131218 5 0.243862 0.30779 -0.0639250 0.976651 4.9947e-03 weaklyHypometh 1 6.8420e-02 weaklyHypometh 0.97251 9.5057e-02 insignificant 1 1.0000e+00 insignificant -0.06938291 4.9739e-01 lowCoverage 1.00000000 lowCoverage chr16 14898204 14899204 135886 NOMO1 ENSG00000103512 0.61511 187 5 0.51230 53 3 0.54545 35 3 0.54888 227 5 0.80000 11 0 0.62483 215 5 0.70632 60 3 0.78846 38 3 0.80000 8 0 0.90000 6 0 0.56593 103 3 0.73333 15 3 0.78667 21 3 0.75000 18 0 0.50000 10 0 1.00000 6 0 0.622403 287 3 0.61806 270 8 0.74074 57 3 0.56052 166 5 0.68889 29 3 1.00000 4 0 0.56861 74 5 0.88000 19 3 0.69591 87 3 0.65900 79 3 0.82143 29 3 0.76190 20 3 0.66042 56 3 0.50538 99 3 0.725333 77 3 0.63394 154 5 0.431155 56 3 0.5213675 38 3 0.3020833 104 3 0.518519 27 3 0.460901 72 5 0.696795 118 3 0.69016 233 5 0.67919 200 5 0.608442 172 5 0.59439 74 5 0.66254 155 5 0.72097 0.52460 0.57576 0.75554 0.83333 0.81507 0.84386 0.78846 1.00000 1.00000 0.60988 0.73333 0.64444 0.50000 0.66667 1.00000 0.762610 0.74413 0.81481 0.67826 0.81481 1.00000 0.66009 0.80000 0.82652 0.59833 0.86905 0.68254 0.65417 0.67742 0.70889 0.76743 0.751198 0.5213675 0.5208333 0.518519 0.707516 0.595726 0.807097 0.817094 0.745455 0.72024 0.76678 0 0.70168 0.70977 0.01495248 3 0.61944 0.60008 0.01936032 0.3570274 0.7548156 lowCoverage 1 1.00000 lowCoverage 0.6648026 0.5592315 lowCoverage 1 1 lowCoverage -0.03078341 0.539949 lowCoverage 1 lowCoverage 0.74271 0.573494 0.15524177 3 0.66539 0.403363 0.2620226 3.1535e-17 0.99996 lowCoverage 1.0512e-15 1 lowCoverage 4.8882e-06 0.999972 lowCoverage 1.3966e-04 1 lowCoverage 0.1974805 1.0909e-02 lowCoverage 1.9481e-01 lowCoverage 0.70168 0.75540 -0.0470598 5 0.61944 0.69344 -0.07399888 7.1627e-01 6.3035e-02 insignificant 1.0000e+00 1.0000000 insignificant 8.5522e-01 0.4431277 insignificant 1.0000e+00 1.00000 insignificant 0.0390061 2.9063e-01 lowCoverage 1.000000 lowCoverage 0.72504 0.573494 0.1471974 3 0.66121 0.403363 0.2578498 9.3672e-09 0.999906 lowCoverage 2.1784e-07 1 lowCoverage 1.0845e-05 0.999995 lowCoverage 3.4983e-04 1 lowCoverage 0.2282639 5.6148e-03 lowCoverage 1.1010e-01 lowCoverage 0.70977 0.75540 -0.06187306 3 0.60008 0.69344 -0.0933592 9.7611e-01 0.0314262 lowCoverage 1.0000e+00 1 lowCoverage 9.4962e-01 0.3538228 lowCoverage 1.0000e+00 1 lowCoverage 0.0697895 1.3015e-01 lowCoverage 1.0000000 lowCoverage 0.573494 0.79462 -0.200702 3 0.403363 0.74489 -0.3415302 1.000000 1.0754e-07 lowCoverage 1 4.3015e-06 lowCoverage 1.00000 1.0299e-04 lowCoverage 1 5.4208e-03 lowCoverage -0.15847446 2.9260e-02 lowCoverage 0.48053926 lowCoverage chr16 14925411 14926411 135887 PKD1P1 ENSG00000183793 0.96624 487 18 0.84913 354 17 0.89226 446 17 0.94835 606 18 0.93689 313 17 0.88991 595 17 0.90938 353 17 0.91352 372 17 0.89074 609 17 0.93529 483 17 0.87617 480 17 0.90358 394 18 0.92717 581 17 0.84896 297 14 0.90866 648 17 0.84326 315 18 0.808683 241 11 0.91488 688 18 0.92011 319 17 0.95266 476 17 0.96201 140 16 0.86603 285 17 0.93257 393 18 0.77713 236 17 0.91552 299 17 0.93710 418 17 0.79612 351 17 0.84060 325 17 0.88853 344 17 0.92577 366 17 0.909925 248 17 0.91679 470 17 0.730089 279 17 0.8342285 306 17 0.7560583 224 15 0.848038 161 15 0.802854 279 17 0.865971 242 17 0.89538 574 18 0.93362 714 18 0.942162 571 18 0.93184 640 18 0.93283 576 18 0.96297 0.86773 0.87838 0.95135 0.93876 0.93073 0.91122 0.90086 0.90585 0.93153 0.93761 0.91685 0.93409 0.89165 0.93567 0.90140 0.890822 0.91610 0.91474 0.94398 0.96886 0.91438 0.92692 0.87181 0.91372 0.94099 0.90769 0.93045 0.92604 0.94537 0.93485 0.91841 0.803070 0.8109129 0.8029716 0.848607 0.838743 0.866479 0.949120 0.939251 0.939837 0.93172 0.93885 17 0.91929 0.91974 -0.00315867 17 0.89238 0.84899 0.04338956 0.4321909 0.6132311 insignificant 1 1.00000 insignificant 0.6018465 0.5376993 insignificant 1 1 insignificant 0.01278399 0.510020 insignificant 1 insignificant 0.91929 0.808182 0.11081769 17 0.89238 0.726358 0.1660200 7.2918e-22 1.00000 weaklyHypermeth 3.3145e-20 1 weaklyHypermeth 1.7872e-08 0.999795 weaklyHypermeth 1.0513e-06 1 weaklyHypermeth 0.0955852 5.3101e-03 weaklyHypermeth 1.0412e-01 insignificant 0.91926 0.94309 -0.0191206 18 0.88700 0.89182 -0.00482528 9.8566e-01 3.4810e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.6895e-01 0.0751379 insignificant 1.0000e+00 1.00000 insignificant -0.0253741 5.5034e-02 insignificant 1.000000 insignificant 0.91974 0.808182 0.1124379 17 0.84899 0.726358 0.1226304 3.3619e-14 1.000000 weaklyHypermeth 1.2452e-12 1 weaklyHypermeth 4.4033e-07 0.999998 weaklyHypermeth 2.2016e-05 1 weaklyHypermeth 0.0828013 1.2195e-02 weaklyHypermeth 2.1395e-01 insignificant 0.91994 0.94309 -0.01611859 17 0.85810 0.89182 -0.0337176 9.8542e-01 0.0533922 insignificant 1.0000e+00 1 insignificant 9.7800e-01 0.3752023 insignificant 1.0000e+00 1 insignificant -0.0381581 5.8465e-02 insignificant 1.0000000 insignificant 0.808725 0.94309 -0.125356 17 0.762676 0.89182 -0.1291462 1.000000 2.0453e-09 weaklyHypometh 1 1.2031e-07 weaklyHypometh 1.00000 7.3147e-06 weaklyHypometh 1 6.0956e-04 weaklyHypometh -0.12095934 1.7659e-03 weaklyHypometh 0.05696590 weaklyHypometh chr16 15267350 15268350 135901 ENSG00000207294 0.45702 255 9 0.29822 201 9 0.28728 147 9 0.29015 272 8 0.13729 86 9 0.33658 298 9 0.24170 141 9 0.17407 213 9 0.29139 155 9 0.24769 161 9 0.43258 168 9 0.19629 138 9 0.23000 127 9 0.15385 21 2 0.25380 183 9 0.13420 126 5 0.049200 173 9 0.34814 281 8 0.24558 117 8 0.16550 288 9 0.49310 77 9 0.15866 198 9 0.29912 180 9 0.36385 68 9 0.44495 133 8 0.37320 232 9 0.26915 158 9 0.16825 39 4 0.20952 159 8 0.36002 276 9 0.127536 295 9 0.30130 222 9 0.139244 216 8 0.0793651 171 7 0.0121212 244 7 0.250195 108 7 0.177273 97 9 0.175481 285 9 0.33788 354 8 0.30674 305 8 0.092134 312 8 0.20648 329 8 0.32643 424 9 0.45761 0.31653 0.31428 0.30419 0.15370 0.34031 0.26122 0.20054 0.32413 0.27259 0.44723 0.20738 0.22460 NA 0.28450 0.13973 0.055905 0.34712 0.21252 0.17686 0.51602 0.17467 0.32369 0.37249 0.44906 0.40460 0.28891 0.19056 0.23817 0.38558 0.14735 0.33583 0.152017 0.1020559 0.0124790 0.167941 0.186550 0.201886 0.347691 0.335744 0.069349 0.23347 0.34568 8 0.28274 0.32401 -0.04807860 9 0.25904 0.29385 -0.03481429 0.9245843 0.0273862 weaklyHypometh 1 1.00000 insignificant 0.9916202 0.0212264 weaklyHypometh 1 1 insignificant -0.04886225 0.238837 insignificant 1 insignificant 0.28274 0.142730 0.12592758 8 0.25904 0.135406 0.1236322 3.1024e-08 1.00000 weaklyHypermeth 5.4428e-07 1 weaklyHypermeth 6.6646e-07 1.000000 weaklyHypermeth 2.3802e-05 1 weaklyHypermeth 0.1095798 2.3268e-02 weaklyHypermeth 3.4728e-01 insignificant 0.28274 0.31090 -0.0039324 8 0.25904 0.26737 -0.00833219 4.1178e-01 4.3815e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.6160e-01 0.5745024 insignificant 1.0000e+00 1.00000 insignificant -0.0054069 9.2025e-01 insignificant 1.000000 insignificant 0.32401 0.142730 0.1717029 8 0.29385 0.135406 0.1584465 1.3486e-08 1.000000 weaklyHypermeth 2.9969e-07 1 weaklyHypermeth 1.7396e-07 1.000000 weaklyHypermeth 9.6647e-06 1 weaklyHypermeth 0.1584421 5.2592e-03 weaklyHypermeth 1.0518e-01 insignificant 0.32401 0.31090 0.04280679 8 0.29385 0.26737 0.0264821 1.6175e-01 0.7679444 insignificant 1.0000e+00 1 insignificant 1.2828e-01 0.9423357 insignificant 1.0000e+00 1 insignificant 0.0434553 4.6972e-01 insignificant 1.0000000 insignificant 0.142730 0.31090 -0.138872 8 0.135406 0.26737 -0.1319644 0.999999 6.0327e-05 weaklyHypometh 1 1.3711e-03 weaklyHypometh 1.00000 2.6248e-04 weaklyHypometh 1 1.1085e-02 weaklyHypometh -0.11498673 8.3275e-02 insignificant 1.00000000 insignificant chr16 16321804 16322804 135915 ENSG00000214967 0.94679 297 10 0.96161 112 7 0.87024 92 7 0.94746 330 10 0.99160 69 4 0.95610 373 10 0.97120 84 7 0.88639 94 10 0.91250 84 7 0.95486 95 7 0.91905 122 10 0.96429 30 3 0.95504 149 10 0.96310 71 7 0.93278 115 10 0.88095 24 0 NA 0 0 0.92272 779 12 0.95710 217 10 0.92243 310 10 0.91905 53 7 0.92538 147 10 0.91690 147 10 0.91883 48 3 0.71230 263 10 0.96892 165 7 0.91126 111 7 0.89667 42 3 0.92814 172 10 0.94630 205 7 0.927342 170 9 0.96667 263 11 0.866972 150 10 0.8842041 269 10 0.7621404 166 10 0.954167 111 4 0.610476 61 8 0.922327 320 11 0.95950 220 10 0.97783 313 10 0.789974 292 10 0.93587 393 10 0.95445 232 10 0.93583 0.95405 0.89855 0.95250 0.98428 0.94119 0.95680 0.90675 0.90232 0.97124 0.88225 0.96531 0.96181 0.95458 0.93835 0.88382 NA 0.91049 0.94556 0.93798 0.91925 0.92282 0.90780 0.91291 0.94602 0.95891 0.91327 0.87935 0.94654 0.95817 0.97468 0.94855 0.909563 0.9333213 0.8647979 0.949502 0.923266 0.937655 0.965053 0.973147 0.956183 0.94180 0.96547 3 0.93550 0.94273 -0.00726095 10 0.93935 0.93977 -0.00041492 0.7154972 0.3130908 insignificant 1 1.00000 insignificant 0.2627043 0.5539682 insignificant 1 1 insignificant 0.02621464 0.222295 insignificant 1 insignificant 0.93560 0.901961 0.02988413 10 0.94441 0.891501 0.0529059 1.5623e-05 0.52096 weaklyHypermeth 2.1112e-04 1 weaklyHypermeth 1.1779e-01 0.718093 insignificant 1.0000e+00 1 insignificant 0.1043126 1.0132e-01 insignificant 1.0000e+00 insignificant 0.93550 0.95715 -0.0221967 10 0.93935 0.95703 -0.01767540 9.9097e-01 5.6241e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.2170e-01 0.3955696 insignificant 1.0000e+00 1.00000 insignificant 0.0141691 7.0349e-01 insignificant 1.000000 insignificant 0.94065 0.897674 0.0327268 10 0.72250 0.646534 0.0759624 4.3009e-03 0.869687 weaklyHypermeth 5.1818e-02 1 weaklyHypermeth 4.3712e-01 0.845258 insignificant 1.0000e+00 1 insignificant 0.0780980 2.0510e-01 insignificant 1.0000e+00 insignificant 0.94167 0.95583 -0.01560124 10 0.79519 0.80979 -0.0146050 9.8308e-01 0.3895054 insignificant 1.0000e+00 1 insignificant 9.4858e-01 0.6220855 insignificant 1.0000e+00 1 insignificant -0.0120455 7.6716e-01 insignificant 1.0000000 insignificant 0.900187 0.95583 -0.056157 10 0.746001 0.80979 -0.0637924 0.998853 1.4763e-02 weaklyHypometh 1 1.8687e-01 insignificant 0.97261 3.4105e-01 insignificant 1 1.0000e+00 insignificant -0.09014350 1.8344e-01 insignificant 1.00000000 insignificant chr16 16324062 16325062 135916 ENSG00000183458 0.94892 531 19 0.85708 400 18 0.89757 476 18 0.88187 689 19 0.86590 334 18 0.86464 653 18 0.84496 435 18 0.86107 374 18 0.91161 639 18 0.91920 655 18 0.85969 482 18 0.78635 400 19 0.84492 567 18 0.95417 253 14 0.91527 663 18 0.88552 327 18 0.880314 227 12 0.91461 663 19 0.94201 396 18 0.89344 523 18 0.88054 167 18 0.87699 273 18 0.91108 475 19 0.89204 282 18 0.95052 330 18 0.90171 411 18 0.80735 400 18 0.89741 322 17 0.86169 300 18 0.95193 346 18 0.885856 264 18 0.85626 642 19 0.754528 303 18 0.7907200 318 18 0.7525668 213 12 0.882001 213 14 0.679192 343 17 0.859948 321 18 0.91170 744 19 0.91887 828 19 0.941314 661 19 0.88794 741 19 0.93206 696 19 0.94475 0.87039 0.89448 0.92777 0.91136 0.89927 0.92134 0.92511 0.90296 0.92447 0.88960 0.85247 0.92664 0.92783 0.89492 0.88862 0.929145 0.91120 0.93081 0.88836 0.87641 0.85822 0.90547 0.88804 0.94559 0.89983 0.89995 0.91766 0.91293 0.94799 0.93883 0.90398 0.846268 0.7689234 0.7512621 0.863476 0.755615 0.849356 0.913279 0.910518 0.935360 0.88996 0.92531 18 0.91122 0.90480 0.00302084 18 0.83611 0.83191 0.00419819 0.0317726 0.0139186 weaklyHypermeth 1 1.00000 insignificant 0.1328641 0.0139280 inconclusive 1 1 insignificant -0.00299324 0.839475 insignificant 1 insignificant 0.91122 0.783752 0.12251345 18 0.83611 0.705111 0.1309938 9.8235e-28 0.99983 weaklyHypermeth 6.1397e-26 1 weaklyHypermeth 2.2756e-07 0.967253 weaklyHypermeth 9.1025e-06 1 weaklyHypermeth 0.0999629 2.0885e-02 weaklyHypermeth 3.2131e-01 insignificant 0.91220 0.92371 -0.0077813 19 0.91098 0.91962 -0.00863961 6.6579e-01 8.7959e-02 insignificant 1.0000e+00 1.0000000 insignificant 5.6152e-01 0.1650526 insignificant 1.0000e+00 1.00000 insignificant -0.0319205 2.8238e-02 weaklyHypometh 1.000000 insignificant 0.90480 0.783752 0.1197321 18 0.83191 0.705111 0.1267956 2.8915e-16 0.999986 weaklyHypermeth 1.2048e-14 1 weaklyHypermeth 3.0723e-06 0.998487 weaklyHypermeth 1.1633e-04 1 weaklyHypermeth 0.1029562 1.8182e-02 weaklyHypermeth 2.9325e-01 insignificant 0.90617 0.92371 -0.00893979 18 0.90771 0.91962 -0.0119134 7.2225e-01 0.1088001 insignificant 1.0000e+00 1 insignificant 4.4677e-01 0.3765692 insignificant 1.0000e+00 1 insignificant -0.0289273 6.8446e-02 insignificant 1.0000000 insignificant 0.786260 0.92371 -0.125503 18 0.798901 0.91962 -0.1207177 0.997965 8.1342e-09 weaklyHypometh 1 4.5190e-07 weaklyHypometh 0.97817 2.1228e-04 weaklyHypometh 1 1.0109e-02 weaklyHypometh -0.13188347 6.5039e-03 weaklyHypometh 0.15125277 insignificant chr16 16490746 16491746 135922 ENSG00000214940 0.36467 222 8 0.21179 219 9 0.25154 151 9 0.28457 305 8 0.17119 91 9 0.34809 305 9 0.15249 136 5 0.19673 209 9 0.20928 165 9 0.13269 156 9 0.31435 234 9 0.20958 142 9 0.19190 246 9 0.12179 25 2 0.26980 181 8 0.13735 83 9 0.056011 227 8 0.34106 346 8 0.19171 97 8 0.18580 249 9 0.39859 59 6 0.16827 252 9 0.31764 226 8 0.27205 80 9 0.44429 119 8 0.48938 239 9 0.28323 195 9 0.32619 43 2 0.17299 152 8 0.42568 299 9 0.087923 331 9 0.29272 254 9 0.140994 257 8 0.0958089 147 8 0.0196078 253 8 0.100949 119 7 0.260374 98 9 0.142977 253 9 0.33202 449 8 0.32982 330 8 0.076668 384 7 0.30979 315 7 0.26763 393 8 0.40497 0.22027 0.27661 0.32335 0.21854 0.36765 0.15564 0.20704 0.21564 0.13868 0.35097 0.22266 0.20719 NA 0.30520 0.17371 0.062785 0.37811 0.23611 0.20091 0.44661 0.18831 0.35094 0.28700 0.46358 0.53078 0.33628 0.30628 0.20197 0.45674 0.10316 0.32053 0.158419 0.1197435 0.0169398 0.101021 0.314118 0.169633 0.375393 0.369895 0.094119 0.29666 0.30596 8 0.26551 0.31080 -0.05338003 9 0.24104 0.29083 -0.04979042 0.9984618 0.0189211 weaklyHypometh 1 1.00000 insignificant 0.9997764 0.0011223 weaklyHypometh 1 1 insignificant -0.08946017 0.037293 weaklyHypometh 1 insignificant 0.26551 0.134871 0.11821701 8 0.24104 0.121566 0.1194707 3.0475e-08 1.00000 weaklyHypermeth 5.4419e-07 1 weaklyHypermeth 3.0756e-05 1.000000 weaklyHypermeth 7.5015e-04 1 weaklyHypermeth 0.0903335 3.9722e-02 weaklyHypermeth 5.5495e-01 insignificant 0.26551 0.32549 -0.0434833 8 0.24104 0.26697 -0.02593603 5.7866e-01 6.0297e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.6010e-01 0.0856135 insignificant 1.0000e+00 1.00000 insignificant -0.0460675 4.0998e-01 insignificant 1.000000 insignificant 0.31080 0.134871 0.1729907 8 0.29083 0.121566 0.1692611 1.6294e-07 1.000000 weaklyHypermeth 3.1949e-06 1 weaklyHypermeth 4.9899e-07 1.000000 weaklyHypermeth 2.2681e-05 1 weaklyHypermeth 0.1797936 1.9578e-03 weaklyHypermeth 4.4495e-02 weaklyHypermeth 0.31080 0.32549 0.01444090 8 0.29083 0.26697 0.0238544 2.8326e-01 0.8056934 insignificant 1.0000e+00 1 insignificant 1.2770e-01 0.8649903 insignificant 1.0000e+00 1 insignificant 0.0433927 4.8521e-01 insignificant 1.0000000 insignificant 0.134871 0.32549 -0.158741 8 0.121566 0.26697 -0.1454067 0.999998 2.9088e-06 weaklyHypometh 1 8.5553e-05 weaklyHypometh 0.99998 6.3871e-04 weaklyHypometh 1 2.3084e-02 weaklyHypometh -0.13640095 4.9472e-02 weaklyHypometh 0.72752450 insignificant chr16 16980027 16981027 135963 ENSG00000214940 0.80975 174 5 0.78239 94 5 0.84863 91 5 0.89098 79 5 0.72619 41 5 0.71908 163 5 0.80432 61 5 0.73413 58 5 0.81925 77 5 0.72521 70 5 0.78261 99 5 0.75636 54 5 0.86961 74 5 NA 0 0 0.79028 57 5 0.79641 61 5 0.842262 64 5 0.82101 85 5 0.81390 116 5 0.81901 140 5 0.73333 24 3 0.70730 44 5 0.79337 123 5 0.83016 39 5 0.85714 37 5 0.78591 107 5 0.71133 34 3 0.84286 33 5 0.72090 75 5 0.73724 119 5 0.784132 78 5 0.77835 228 5 0.602435 78 5 0.5450350 57 5 0.6900000 84 5 0.794545 53 5 0.629762 38 5 0.739869 115 5 0.83311 138 5 0.89868 144 5 0.796625 125 5 0.76998 172 5 0.86226 123 5 0.81374 0.78640 0.84766 0.89550 0.72719 0.72892 0.82077 0.73617 0.82073 0.73226 0.78978 0.76248 0.87912 NA 0.79978 0.80151 0.841557 0.82251 0.82137 0.82415 0.74277 0.70768 0.79993 0.82989 0.85301 0.79371 0.71203 0.84393 0.72771 0.73971 0.78344 0.78115 0.610762 0.5375197 0.6912769 0.794745 0.636457 0.744582 0.838347 0.905557 0.800700 0.77167 0.86136 5 0.80036 0.77258 0.03285625 5 0.79752 0.77068 0.02684082 0.0021000 0.4478971 weaklyHypermeth 1 1.00000 insignificant 0.0031181 0.5401641 weaklyHypermeth 1 1 insignificant 0.02393886 0.214261 lowCoverage 1 lowCoverage 0.80036 0.665882 0.14093142 5 0.79752 0.676296 0.1212265 3.5441e-08 0.96317 weaklyHypermeth 6.1105e-07 1 weaklyHypermeth 7.3394e-05 0.956294 weaklyHypermeth 1.5290e-03 1 weaklyHypermeth 0.1305001 1.6319e-02 lowCoverage 2.5903e-01 lowCoverage 0.80036 0.83048 -0.0283053 5 0.79752 0.82715 -0.02962282 8.4228e-01 1.3756e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7464e-01 0.0725632 insignificant 1.0000e+00 1.00000 insignificant -0.0346902 2.2163e-01 lowCoverage 1.000000 lowCoverage 0.77258 0.665882 0.1030388 5 0.77068 0.676296 0.0943857 6.4135e-05 0.996436 weaklyHypermeth 8.4389e-04 1 weaklyHypermeth 5.6519e-03 0.998541 weaklyHypermeth 8.3117e-02 1 weaklyHypermeth 0.1065612 3.5631e-02 lowCoverage 4.9229e-01 lowCoverage 0.77258 0.83048 -0.05741299 5 0.77068 0.82715 -0.0564636 9.9885e-01 0.0119823 weaklyHypometh 1.0000e+00 1 insignificant 9.9566e-01 0.0483226 weaklyHypometh 1.0000e+00 1 insignificant -0.0586290 6.5856e-02 lowCoverage 1.0000000 lowCoverage 0.665882 0.83048 -0.161591 5 0.676296 0.82715 -0.1508493 0.999942 9.8529e-05 weaklyHypometh 1 2.1895e-03 weaklyHypometh 0.99987 1.9974e-03 weaklyHypometh 1 4.7557e-02 weaklyHypometh -0.16519023 5.6189e-03 weaklyHypometh 0.13378301 insignificant chr16 18396239 18397239 136083 ENSG00000183889 0.803607 368 11 0.84740 423 11 0.820434 296 11 0.875488 613 11 0.857316 209 9 0.819310 612 11 0.821004 287 9 0.901743 306 11 0.830918 382 11 0.893722 346 11 0.896695 374 11 0.791277 172 9 0.834877 468 11 0.893971 183 10 0.870440 441 11 0.868272 157 11 0.846168 117 7 0.795950 735 11 0.901652 337 9 0.826958 479 10 0.89113 129 11 0.871326 227 11 0.913126 268 11 0.895168 196 11 0.896239 291 11 0.868945 475 11 0.8111827 266 11 0.913062 126 9 0.855856 387 10 0.893622 479 11 0.916640 346 11 0.85938 534 11 0.6796897 336 11 0.632282 267 11 0.5268674 246 10 0.8021398 141 10 0.732836 228 10 0.811038 473 11 0.846545 512 11 0.768756 714 11 0.836931 512 11 0.856726 597 11 0.824045 635 11 0.864805 0.841149 0.809039 0.884324 0.893557 0.88412 0.869431 0.881902 0.858738 0.895446 0.883667 0.843000 0.876653 0.876028 0.858455 0.90723 0.925545 0.834353 0.898190 0.868398 0.910379 0.852818 0.909564 0.875160 0.901734 0.869567 0.863187 0.856906 0.815930 0.873135 0.900373 0.870894 0.6501480 0.5676416 0.5229791 0.7375623 0.6627173 0.720438 0.829040 0.814257 0.832753 0.841244 0.807829 8 0.876183 0.878894 -0.00597195 11 0.817084 0.863205 -0.0461216 0.986827 4.6349e-01 insignificant 1 1.0000000 insignificant 0.995448 0.38472694 insignificant 1 1.0000 insignificant -0.03227970 0.0120888 weaklyHypometh 1.00000 insignificant 0.875942 0.687167 0.1860734 11 0.791443 0.719518 0.0719247 1.2992e-24 9.2127e-01 weaklyHypermeth 1.1811e-22 1.000000 weaklyHypermeth 5.7581e-11 0.83098478 weaklyHypermeth 7.1976e-09 1.00000 weaklyHypermeth 0.1523844 1.7641e-02 weaklyHypermeth 2.8002e-01 insignificant 0.876423 0.842088 0.0437321 11 0.857396 0.767608 0.0897878 5.3650e-05 7.8901e-01 weaklyHypermeth 2.3326e-03 1.0000000 weaklyHypermeth 2.2467e-03 8.1840e-01 weaklyHypermeth 9.3920e-02 1.00000000 weaklyHypermeth 2.3259e-02 2.2781e-01 insignificant 1.0000e+00 insignificant 0.878829 0.686797 0.1991469 11 0.851806 0.696144 0.1556613 8.8444e-18 0.99932447 weaklyHypermeth 7.3703e-16 1.00000 weaklyHypermeth 4.5153e-11 0.99590950 weaklyHypermeth 7.5255e-09 1.00000 weaklyHypermeth 0.1846641 8.0220e-03 weaklyHypermeth 1.5136e-01 insignificant 0.879032 0.842371 0.05254278 11 0.88379 0.837391 0.04639707 1.0053e-04 9.0063e-01 weaklyHypermeth 4.5695e-03 1.000000 weaklyHypermeth 1.5224e-04 0.98113650 weaklyHypermeth 9.5149e-03 1.00000 weaklyHypermeth 0.0555389 1.7463e-02 weaklyHypermeth 0.60216621 insignificant 0.687389 0.842088 -0.1281016 11 0.737811 0.767608 -0.0297974 9.6211e-01 1.3268e-06 weaklyHypometh 1.0000e+00 4.9142e-05 weaklyHypometh 9.5542e-01 3.0919e-05 weaklyHypometh 1.00000000 0.00206125 weaklyHypometh -0.12912518 3.2123e-02 weaklyHypometh 0.4986270 insignificant chr16 18416989 18417989 136085 ENSG00000206927 0.702323 159 5 0.54422 70 3 1.000000 12 0 0.689876 162 5 0.763889 26 3 0.473239 239 5 0.545455 69 3 0.911111 29 3 0.500000 12 0 0.666667 11 0 0.418355 105 3 0.600000 8 0 0.733333 21 3 0.722222 17 3 0.800000 15 3 1.000000 6 0 0.651846 305 3 0.628846 255 6 0.642300 64 3 0.478700 223 5 0.51667 14 2 0.500000 2 0 0.435102 68 5 0.705128 37 3 0.670058 69 5 0.657407 60 3 0.9166667 8 0 0.732143 29 3 0.644762 48 3 0.741252 72 3 0.617360 73 5 0.51601 137 5 0.4302609 73 3 0.704545 34 3 0.2653226 103 3 0.5909091 34 3 0.582609 79 3 0.416501 129 3 0.700432 186 7 0.630186 162 5 0.635791 202 5 0.643038 73 7 0.475927 135 5 0.863933 0.645575 1.000000 0.782682 0.790675 0.77447 0.790043 0.835979 0.607143 0.753968 0.725397 0.630952 0.607937 0.710317 0.800000 1.00000 0.797777 0.752777 0.819479 0.722195 0.755556 0.659509 0.872449 0.875763 0.852061 0.699735 0.880952 0.744898 0.635147 0.846372 0.575122 0.762326 0.7311387 0.6125541 0.4278034 0.6872294 0.6286232 0.734193 0.821857 0.789351 0.816621 0.794785 0.794258 0 0.697456 0.701299 0.00272921 3 0.618857 0.603696 0.0151615 0.098657 7.1584e-01 lowCoverage 1 1.0000000 lowCoverage 0.506332 0.73249103 lowCoverage 1 1.0000 lowCoverage 0.03590616 0.5048774 lowCoverage 1.00000 lowCoverage 0.734085 0.597345 0.1209723 3 0.654032 0.533937 0.1200953 1.3283e-04 9.6448e-01 lowCoverage 1.4131e-03 1.000000 lowCoverage 5.6137e-03 0.96084901 lowCoverage 6.1019e-02 1.00000 lowCoverage 0.1752614 4.3441e-02 lowCoverage 5.6417e-01 lowCoverage 0.697456 0.740053 -0.0408618 5 0.618857 0.662793 -0.0439360 6.4292e-01 1.0694e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7468e-01 4.2320e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.6545e-02 3.0159e-01 lowCoverage 1.0000e+00 lowCoverage 0.715986 0.597345 0.1295651 3 0.673976 0.533937 0.1400387 6.1687e-04 0.98828528 lowCoverage 6.8541e-03 1.00000 lowCoverage 4.7281e-03 0.99646483 lowCoverage 5.7595e-02 1.00000 lowCoverage 0.1393553 9.6487e-02 lowCoverage 9.7462e-01 lowCoverage 0.700162 0.740397 -0.04961297 3 0.53662 0.700261 -0.16364220 9.4489e-01 3.6934e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.2334e-01 0.62018381 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0206385 7.0673e-01 lowCoverage 1.00000000 lowCoverage 0.597345 0.778816 -0.1716695 3 0.533937 0.711105 -0.1771687 1.0000e+00 1.5974e-03 lowCoverage 1.0000e+00 2.5356e-02 lowCoverage 1.0000e+00 6.9244e-04 lowCoverage 1.00000000 0.02727904 lowCoverage -0.11871677 1.4983e-01 lowCoverage 1.0000000 lowCoverage chr16 20522678 20523678 136144 ENSG00000221327 0.945000 114 5 0.88459 130 2 0.733578 142 5 0.980952 106 5 0.960251 110 5 0.914306 297 5 0.910798 157 5 0.945283 132 5 0.795505 101 5 0.944555 130 5 0.964394 161 5 0.924176 92 5 0.973257 87 2 0.907826 61 5 0.962857 193 5 0.888517 101 5 0.000000 3 0 0.836869 127 5 0.938122 204 5 0.941657 169 5 0.65306 27 2 0.658170 50 5 0.956177 111 5 0.833333 52 5 0.871282 39 2 0.982173 248 5 0.8604839 71 2 0.666667 35 2 0.855233 166 2 0.965196 196 2 0.950794 206 2 0.93663 128 2 0.5695455 203 5 0.571930 135 5 0.9957447 198 5 0.6000000 10 2 0.542593 99 2 0.878010 173 2 0.967530 259 5 0.959641 138 5 0.966207 92 5 0.972727 68 5 0.913961 109 5 0.986632 0.885529 0.732989 0.955688 0.901619 0.92640 0.898721 0.886216 0.918682 0.935867 0.934975 0.851496 0.934131 0.869565 0.872546 0.93340 NA 0.875000 0.907065 0.926110 0.800595 0.937092 0.930280 1.000000 0.928561 0.970459 0.859756 1.000000 0.855596 0.950016 0.928009 0.937920 0.7096058 0.4523635 0.9901005 0.6000000 0.5524949 0.879459 0.956524 0.942212 0.914440 0.933396 0.918155 2 0.905235 0.922498 -0.02007831 5 0.934481 0.693159 0.2413215 0.775866 4.7857e-01 insignificant 1 1.0000000 insignificant 0.880066 0.17778418 insignificant 1 1.0000 insignificant 0.01852515 0.7584873 lowCoverage 1.00000 lowCoverage 0.905126 0.723716 0.1829813 5 0.908273 0.724590 0.1836833 1.2620e-06 1.0000e+00 weaklyHypermeth 1.9122e-05 1.000000 weaklyHypermeth 2.0749e-03 0.99982627 weaklyHypermeth 2.5617e-02 1.00000 weaklyHypermeth 0.1746546 9.0898e-02 lowCoverage 9.6700e-01 lowCoverage 0.905126 0.950450 -0.0429773 5 0.908273 0.959542 -0.0512688 9.9909e-01 1.6836e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9353e-01 7.1262e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant -8.8388e-02 8.5363e-02 lowCoverage 1.0000e+00 lowCoverage 0.925926 0.723716 0.2014211 5 0.930423 0.724590 0.2058332 1.8146e-04 0.99991321 hypermethylated 2.2130e-03 1.00000 hypermethylated 5.6149e-03 0.99960533 weaklyHypermeth 6.4539e-02 1.00000 weaklyHypermeth 0.1561295 1.1401e-01 lowCoverage 1.0000e+00 lowCoverage 0.925926 0.950450 -0.01821753 5 0.93042 0.959542 -0.02911891 9.4098e-01 2.9657e-01 insignificant 1.0000e+00 1.000000 insignificant 8.3341e-01 0.37695523 insignificant 1.0000e+00 1.00000 insignificant -0.1069135 1.3686e-02 lowCoverage 0.50689793 lowCoverage 0.723716 0.950450 -0.2254088 5 0.724590 0.959542 -0.2349521 9.9999e-01 5.7469e-04 hypomethylated 1.0000e+00 1.0262e-02 hypomethylated 9.9999e-01 2.9110e-03 weaklyHypometh 1.00000000 0.06930906 weaklyHypometh -0.26304295 2.0334e-02 lowCoverage 0.3836555 lowCoverage chr16 24528581 24529581 136366 RBBP6 ENSG00000122257 0.024979 602 7 0.18888 623 8 0.185610 178 9 0.024666 667 9 0.025784 197 9 0.085465 777 7 0.033528 329 9 0.009683 250 9 0.026847 214 9 0.027056 121 7 0.042934 433 10 0.091168 57 8 0.025253 116 7 0.049537 121 7 0.022201 374 8 0.000000 74 7 NA 0 0 0.047558 1204 7 0.033145 332 7 0.031775 590 7 0.02135 121 7 0.000000 7 0 0.023889 303 9 0.034394 192 8 0.028829 167 4 0.037347 627 9 0.0064786 135 6 0.042857 116 7 0.036677 331 7 0.028260 579 9 0.155941 606 9 0.02893 509 7 0.0554002 299 10 0.178483 349 9 0.0039683 177 7 0.0000000 11 0 0.080390 318 9 0.032388 571 9 0.097199 742 9 0.072994 599 9 0.032039 635 9 0.059939 601 7 0.022836 669 9 0.040374 0.054955 0.209338 0.044930 0.040170 0.12976 0.056427 0.009047 0.032405 0.046071 0.052178 0.090983 0.027727 0.054167 0.027059 0.00000 NA 0.063387 0.041013 0.056550 0.050076 0.015004 0.033333 0.058246 0.036857 0.044350 0.010711 0.047143 0.054896 0.038804 0.064809 0.050682 0.0633683 0.1251812 0.0060714 0.0472227 0.0719683 0.024511 0.062426 0.049624 0.040895 0.062386 0.028492 5 0.058848 0.047387 0.01325868 9 0.059198 0.034498 0.0247003 0.195909 9.9816e-01 insignificant 1 1.0000000 insignificant 0.336334 0.98719160 insignificant 1 1.0000 insignificant 0.01429286 0.3966992 insignificant 1.00000 insignificant 0.058742 0.073043 -0.0123962 9 0.041853 0.062361 -0.0205081 5.7817e-01 9.1495e-02 insignificant 1.0000e+00 1.000000 insignificant 6.8427e-01 0.55557801 insignificant 1.0000e+00 1.00000 insignificant -0.0070660 8.1826e-01 insignificant 1.0000e+00 insignificant 0.058937 0.056377 0.0062091 9 0.051153 0.059723 -0.0085697 2.1339e-01 4.3357e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.0348e-01 3.4498e-01 insignificant 1.0000e+00 1.00000000 insignificant -5.6294e-03 7.6215e-01 insignificant 1.0000e+00 insignificant 0.047347 0.073086 -0.0255471 9 0.034731 0.068597 -0.0338660 3.4946e-01 0.04000648 weaklyHypometh 1.0000e+00 1.00000 insignificant 6.8665e-01 0.18610739 insignificant 1.0000e+00 1.00000 insignificant -0.0213589 4.9104e-01 insignificant 1.0000e+00 insignificant 0.047399 0.056377 -0.00544690 9 0.03859 0.059723 -0.02113304 4.4913e-01 2.8134e-01 insignificant 1.0000e+00 1.000000 insignificant 8.0018e-01 0.09015320 insignificant 1.0000e+00 1.00000 insignificant -0.0199222 2.8693e-01 insignificant 1.00000000 insignificant 0.073341 0.056377 0.0182193 9 0.076219 0.059723 0.0164958 3.6843e-01 4.4943e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3372e-01 6.4912e-01 insignificant 1.00000000 1.00000000 insignificant 0.00143665 9.6341e-01 insignificant 1.0000000 insignificant chr16 25906527 25907527 136430 HS3ST4 ENSG00000182601 0.756625 138 7 0.57578 199 4 0.362500 67 4 0.677066 109 7 0.750000 32 3 0.685549 178 5 0.673810 32 3 0.859506 85 4 0.523636 49 4 0.700000 17 0 0.806520 185 4 0.000000 1 0 1.000000 21 1 0.770833 48 4 0.900000 28 4 0.875000 16 1 1.000000 73 2 0.627137 64 7 0.839636 90 4 0.675334 161 7 0.56000 25 3 0.593939 42 3 0.725488 543 7 0.882540 42 4 0.900000 15 0 0.781931 190 4 0.8333333 60 4 0.637500 53 4 0.716490 111 4 0.820809 222 4 0.735375 225 4 0.69379 202 7 0.4730392 155 4 0.117225 52 4 0.4794276 295 4 0.0000000 4 0 0.303760 187 5 0.350829 198 4 0.810052 128 5 0.606261 125 5 0.727865 92 7 0.827826 296 6 0.808519 89 7 0.886858 0.586302 0.455882 0.754458 0.739496 0.88785 0.721289 0.859367 0.663102 0.852941 0.916739 NA 1.000000 0.774510 0.882353 0.92514 NA 0.733434 0.921925 0.859394 0.600000 0.586007 0.877182 0.835668 0.852941 0.850507 0.819608 0.691176 0.879866 0.860429 0.915659 0.823204 0.3310265 0.1165212 0.4512260 0.0000000 0.2752796 0.200149 0.812842 0.657704 0.714216 0.868954 0.907308 0 0.796845 0.863006 -0.03810405 4 0.666522 0.705666 -0.0391438 0.779508 2.6233e-01 lowCoverage 1 1.0000000 lowCoverage 0.646640 0.77998341 lowCoverage 1 1.0000 lowCoverage -0.03715330 0.5378907 lowCoverage 1.00000 lowCoverage 0.794311 0.325477 0.4912704 4 0.713838 0.388957 0.3248817 9.2734e-17 9.2474e-01 lowCoverage 4.4159e-15 1.000000 lowCoverage 6.3197e-10 0.85356270 lowCoverage 5.7452e-08 1.00000 lowCoverage 0.4155663 1.4342e-03 lowCoverage 3.5854e-02 lowCoverage 0.796845 0.832877 0.0265641 4 0.666522 0.683338 -0.0168161 2.4888e-01 2.6172e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.1204e-01 6.7898e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -5.3158e-02 4.2712e-01 lowCoverage 1.0000e+00 lowCoverage 0.837136 0.325477 0.5329540 4 0.782326 0.388957 0.3933694 4.3621e-17 0.99042763 lowCoverage 3.1158e-15 1.00000 lowCoverage 3.6952e-08 0.96567595 lowCoverage 2.6394e-06 1.00000 lowCoverage 0.4527196 1.3012e-03 lowCoverage 3.6144e-02 lowCoverage 0.863006 0.832877 0.04928109 6 0.70567 0.683338 0.02232774 5.8324e-02 8.1788e-01 insignificant 1.0000e+00 1.000000 insignificant 2.7808e-01 0.85919348 insignificant 1.0000e+00 1.00000 insignificant -0.0160050 7.6466e-01 lowCoverage 1.00000000 lowCoverage 0.325477 0.781022 -0.4405688 4 0.388957 0.621375 -0.2324184 8.0945e-01 4.4629e-08 lowCoverage 1.0000e+00 3.1878e-06 lowCoverage 8.5437e-01 3.4246e-06 lowCoverage 1.00000000 0.00052686 lowCoverage -0.46872459 9.7848e-04 lowCoverage 0.0543602 lowCoverage chr16 26209248 26210248 136454 ENSG00000216531 0.874542 264 7 0.79770 126 7 0.634609 99 7 0.715450 182 7 0.707330 55 7 0.716121 291 7 0.710253 93 7 0.639343 141 7 0.755922 84 7 0.824528 87 4 0.882312 216 7 0.647835 40 3 0.723493 131 7 0.690909 37 5 0.792063 135 7 0.759570 51 3 0.793595 69 3 0.738255 182 7 0.702485 166 7 0.710551 254 7 0.80787 48 3 0.745139 85 7 0.802584 143 7 0.695767 54 6 0.966518 54 4 0.815002 183 7 0.8693215 68 4 0.852814 50 3 0.653263 86 5 0.672651 199 7 0.711529 162 7 0.78531 357 7 0.7622520 99 7 0.741157 111 7 0.6418637 189 8 0.7692744 45 3 0.691186 58 4 0.803450 184 7 0.824715 237 7 0.831507 196 7 0.850816 189 7 0.794049 172 7 0.716450 212 7 0.873327 0.826477 0.735217 0.823644 0.805877 0.82381 0.775358 0.782568 0.845582 0.860257 0.876334 0.693912 0.780349 0.769101 0.797470 0.82732 0.823931 0.813145 0.821701 0.848527 0.875000 0.853795 0.841264 0.917304 0.933992 0.866527 0.818413 0.850186 0.760832 0.795594 0.821183 0.836661 0.6823484 0.7142576 0.6672666 0.6962691 0.7056347 0.802669 0.844769 0.821467 0.853702 0.833210 0.838035 4 0.806881 0.815312 -0.00486288 7 0.741669 0.649800 0.0918695 0.895807 5.9756e-01 insignificant 1 1.0000000 insignificant 0.988805 0.16685505 insignificant 1 1.0000 insignificant -0.04063765 0.1997602 insignificant 1.00000 insignificant 0.806966 0.715743 0.0838350 7 0.740836 0.721229 0.0196071 2.0569e-06 9.5528e-01 weaklyHypermeth 2.9810e-05 1.000000 weaklyHypermeth 1.6148e-03 0.81898038 weaklyHypermeth 2.1247e-02 1.00000 weaklyHypermeth 0.0059795 8.3880e-01 insignificant 1.0000e+00 insignificant 0.806894 0.836978 -0.0274062 7 0.712040 0.803373 -0.0913322 9.5704e-01 1.1666e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.6959e-01 2.1030e-01 insignificant 1.0000e+00 1.00000000 insignificant -6.2664e-02 5.7932e-02 insignificant 1.0000e+00 insignificant 0.815612 0.715743 0.0878873 7 0.648113 0.721229 -0.0731160 3.2301e-06 0.85288609 weaklyHypermeth 5.2953e-05 1.00000 weaklyHypermeth 2.8168e-04 0.97748427 weaklyHypermeth 5.8684e-03 1.00000 weaklyHypermeth 0.0466171 2.1019e-01 insignificant 1.0000e+00 insignificant 0.816162 0.836978 -0.01940631 7 0.72013 0.803373 -0.08324678 7.8732e-01 1.9251e-01 insignificant 1.0000e+00 1.000000 insignificant 4.7054e-01 0.87941401 insignificant 1.0000e+00 1.00000 insignificant -0.0220263 5.4380e-01 insignificant 1.00000000 insignificant 0.715328 0.836978 -0.1092093 7 0.690255 0.803373 -0.1131179 9.9997e-01 3.2893e-04 weaklyHypometh 1.0000e+00 6.0912e-03 weaklyHypometh 9.9954e-01 3.3774e-03 weaklyHypometh 1.00000000 0.07676017 weaklyHypometh -0.06864345 7.1978e-02 insignificant 0.7997508 insignificant chr16 26564577 26565577 136475 ENSG00000217478 0.078379 185 5 0.12494 111 5 0.034453 113 5 0.090218 195 5 0.052350 67 5 0.120405 311 5 0.036834 110 5 0.101970 111 5 0.055952 98 5 0.126433 76 5 0.050816 118 5 0.062381 91 5 0.088769 126 5 NA 0 0 0.117276 128 5 0.081197 59 5 0.095407 95 5 0.172743 237 5 0.101299 65 5 0.068863 251 5 0.23988 37 5 0.077291 180 5 0.123578 139 5 0.075499 49 5 0.156680 91 5 0.140813 177 5 0.0481818 58 5 0.125210 39 4 0.033333 88 5 0.098248 189 5 0.131075 169 5 0.13135 260 5 0.0069444 123 5 0.174242 108 5 0.1666667 196 5 0.0090909 76 5 0.034348 59 5 0.017424 199 5 0.118869 361 5 0.147743 250 5 0.049063 267 5 0.098179 255 5 0.125699 241 5 0.077354 0.129261 0.036096 0.093454 0.070322 0.12481 0.036976 0.103646 0.057953 0.138972 0.052210 0.063992 0.084049 NA 0.125730 0.08947 0.094796 0.181087 0.090688 0.065367 0.269696 0.073584 0.123947 0.097181 0.153462 0.149102 0.052282 0.156383 0.032861 0.119914 0.123406 0.125360 0.0065603 0.0088975 0.0000000 0.0071567 0.0441530 0.015313 0.108813 0.140199 0.044091 0.084245 0.113129 5 0.093051 0.119919 -0.02689467 5 0.078153 0.099779 -0.0216257 0.997183 6.1509e-02 insignificant 1 1.0000000 insignificant 0.997885 0.09661612 insignificant 1 1.0000 insignificant -0.02769016 0.1384971 lowCoverage 1.00000 lowCoverage 0.093051 0.013141 0.0813812 5 0.078153 0.075914 0.0022392 1.2894e-06 9.9134e-01 weaklyHypermeth 1.9244e-05 1.000000 weaklyHypermeth 1.9140e-05 0.99101805 weaklyHypermeth 5.1730e-04 1.00000 weaklyHypermeth 0.0192851 5.8831e-01 lowCoverage 1.0000e+00 lowCoverage 0.093160 0.119360 -0.0153347 5 0.093784 0.107631 -0.0138473 3.5450e-01 7.0635e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant 6.0156e-01 8.8489e-02 insignificant 1.0000e+00 1.00000000 insignificant -2.0506e-02 3.1178e-01 lowCoverage 1.0000e+00 lowCoverage 0.119919 0.013141 0.1066826 5 0.099779 0.075914 0.0238649 1.4273e-07 0.96924970 weaklyHypermeth 2.7986e-06 1.00000 weaklyHypermeth 6.2080e-06 0.95986354 weaklyHypermeth 2.4832e-04 1.00000 weaklyHypermeth 0.0469753 2.3380e-01 lowCoverage 1.0000e+00 lowCoverage 0.120326 0.119360 0.01219044 5 0.11973 0.107631 0.01210362 1.3106e-01 4.9204e-01 insignificant 1.0000e+00 1.000000 insignificant 5.7432e-02 0.50559253 insignificant 1.0000e+00 1.00000 insignificant 0.0071844 7.6070e-01 lowCoverage 1.00000000 lowCoverage 0.010582 0.119360 -0.0907056 5 0.011097 0.107631 -0.0965343 9.9999e-01 1.2145e-08 weaklyHypometh 1.0000e+00 9.3425e-07 weaklyHypometh 9.9998e-01 9.8997e-05 weaklyHypometh 1.00000000 0.00524911 weaklyHypometh -0.03979092 3.1191e-01 insignificant 1.0000000 insignificant chr16 26632902 26633902 136481 ENSG00000221481 NA 0 0 0.92078 42 5 0.700000 14 0 0.906518 111 5 NA 0 0 1.000000 2 0 0.861759 114 5 NA 0 0 0.834464 89 5 1.000000 1 0 NA 0 0 0.870707 49 5 NA 0 0 NA 0 0 0.950000 32 3 1.000000 19 3 0.883333 12 0 0.863439 98 5 0.933333 36 2 0.889060 176 5 0.00000 3 0 0.493333 23 3 NA 0 0 1.000000 23 1 0.914286 56 4 0.910630 127 5 0.8850000 31 4 0.691429 20 2 0.719048 34 2 1.000000 2 0 NA 0 0 NA 0 0 NA 0 0 0.600000 50 5 0.7500000 86 3 0.2742857 47 3 0.750000 3 0 NA 0 0 NA 0 0 0.953924 110 5 NA 0 0 0.865684 190 5 0.869974 131 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.879245 0.855799 0.01742622 2 0.880572 0.837968 0.0426038 0.102679 5.7738e-01 lowCoverage 1 1.0000000 lowCoverage 0.054617 0.92682675 lowCoverage 1 1.0000 lowCoverage 0.16609827 0.1641493 lowCoverage 1.00000 lowCoverage 0.879245 0.548387 0.3366746 3 0.880572 0.601842 0.2787303 3.9980e-07 9.9998e-01 lowCoverage 6.4484e-06 1.000000 lowCoverage 9.6958e-04 0.99989816 lowCoverage 1.3656e-02 1.00000 lowCoverage 0.3073852 6.8794e-02 lowCoverage 7.9074e-01 lowCoverage 0.879245 0.886311 -0.0130792 5 0.880572 0.886303 -0.0057307 2.3155e-01 2.4832e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4214e-01 6.6701e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.4295e-03 9.0664e-01 lowCoverage 1.0000e+00 lowCoverage 0.855799 0.548387 0.2531980 0 0.837968 0.601842 0.2361265 1.4052e-03 0.99056479 noCoverage 1.4339e-02 1.00000 noCoverage 5.2695e-02 0.97994734 noCoverage 4.5822e-01 1.00000 noCoverage 0.1412869 3.8786e-01 lowCoverage 1.0000e+00 lowCoverage 0.855799 0.886311 -0.05052066 2 0.83797 0.886303 -0.04833444 9.3334e-01 3.6454e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.0550e-01 0.59668038 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1616688 1.7901e-01 lowCoverage 1.00000000 lowCoverage 0.548387 0.886311 -0.3074070 3 0.601842 0.886303 -0.2844609 9.9373e-01 3.5259e-03 lowCoverage 1.0000e+00 5.0371e-02 lowCoverage 9.9328e-01 8.9312e-02 lowCoverage 1.00000000 0.88427299 lowCoverage -0.30295569 6.9944e-02 lowCoverage 0.7948164 lowCoverage chr16 26832250 26833250 136499 ENSG00000221481 0.811363 247 6 0.79964 103 6 0.745049 152 6 0.912434 116 6 0.815527 59 6 0.907234 334 6 0.825445 120 6 0.923124 103 6 0.845838 82 6 0.906863 73 6 0.948964 226 6 0.930147 65 5 0.944444 102 6 1.000000 8 1 0.975309 99 6 0.925926 45 5 0.768765 52 5 0.920887 134 5 0.875451 112 6 0.855956 269 6 0.89808 98 6 0.892266 85 5 0.937975 130 6 0.913889 69 5 0.912963 42 5 0.923041 150 6 0.8669147 117 6 0.796987 82 4 0.858269 85 6 0.895101 147 6 0.921674 171 6 0.89627 377 6 0.7191082 143 6 0.652291 72 6 0.6794251 171 4 0.8166667 32 3 0.641682 124 5 0.817816 117 6 0.955125 237 6 0.960943 246 6 0.958547 160 6 0.972583 240 5 0.858917 176 6 0.841849 0.818908 0.748180 0.896447 0.791816 0.91198 0.851342 0.922402 0.839832 0.921935 0.950766 0.922313 0.947722 0.917512 0.957771 0.91225 0.760390 0.909221 0.854843 0.849263 0.885691 0.876629 0.936973 0.911059 0.876999 0.917249 0.851782 0.819940 0.877041 0.921433 0.919502 0.883829 0.6752013 0.6408560 0.6948037 0.8303738 0.6703182 0.788860 0.948472 0.955244 0.938905 0.965980 0.848068 3 0.882447 0.896330 -0.01683718 6 0.880079 0.897424 -0.0173450 0.908019 1.2229e-01 insignificant 1 1.0000000 insignificant 0.849831 0.12750864 insignificant 1 1.0000 insignificant -0.01086805 0.5740190 insignificant 1.00000 insignificant 0.882447 0.734446 0.1615986 6 0.880079 0.716400 0.1636793 1.2564e-13 9.3105e-01 weaklyHypermeth 4.1881e-12 1.000000 weaklyHypermeth 1.5078e-05 0.99884475 weaklyHypermeth 4.1882e-04 1.00000 weaklyHypermeth 0.1607536 2.3947e-03 weaklyHypermeth 5.4424e-02 weaklyHypermeth 0.882447 0.940510 -0.0594935 6 0.880079 0.944920 -0.0648408 9.9994e-01 1.7748e-03 weaklyHypometh 1.0000e+00 0.2957977 insignificant 9.9967e-01 4.8836e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant -5.9305e-02 4.8109e-02 weaklyHypometh 1.0000e+00 insignificant 0.896330 0.734446 0.1686708 6 0.897424 0.716400 0.1810243 1.8190e-12 0.99563468 weaklyHypermeth 6.7369e-11 1.00000 weaklyHypermeth 3.5081e-05 0.99964825 weaklyHypermeth 9.7448e-04 1.00000 weaklyHypermeth 0.1716216 2.1799e-03 weaklyHypermeth 5.0695e-02 weaklyHypermeth 0.896330 0.940510 -0.04372680 6 0.89742 0.944920 -0.04749583 9.9700e-01 2.2373e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.5291e-01 0.09449592 insignificant 1.0000e+00 1.00000 insignificant -0.0484365 8.2203e-02 insignificant 1.00000000 insignificant 0.734446 0.940510 -0.2337506 6 0.716400 0.944920 -0.2285201 1.0000e+00 7.1300e-09 hypomethylated 1.0000e+00 7.1300e-07 hypomethylated 1.0000e+00 7.7357e-05 hypomethylated 1.00000000 0.00455042 hypomethylated -0.22005816 3.9393e-04 hypomethylated 0.0363812 hypomethylated chr16 28116383 28117383 136541 ENSG00000200138 0.709707 110 4 0.88237 150 6 0.804663 125 6 0.901969 123 8 0.934170 73 4 0.864080 192 8 0.829837 95 3 0.876299 131 6 0.760963 57 5 0.906994 56 6 0.806966 206 9 0.868056 22 2 0.876797 91 6 0.933036 28 4 0.951160 50 5 0.952381 31 3 0.736765 286 2 0.763722 131 11 0.771356 98 6 0.729076 103 8 0.81591 49 6 0.933333 22 4 0.765844 133 9 0.915664 71 4 0.944444 31 5 0.898924 203 6 0.8255473 88 4 0.794444 26 4 0.640142 84 5 0.895248 147 9 0.863225 139 9 0.65637 200 8 0.7909757 117 6 0.718110 115 6 0.7681818 116 4 0.8666667 7 1 0.587751 85 4 0.852118 162 9 0.794780 144 10 0.891807 185 9 0.854090 77 5 0.808225 63 6 0.732575 135 8 0.930105 0.868098 0.821872 0.929079 0.939510 0.90867 0.907343 0.905925 0.933590 0.867248 0.912292 0.898256 0.961833 0.938659 0.951955 0.96013 0.887212 0.745941 0.924117 0.905108 0.940988 0.920987 0.870083 0.875325 0.904301 0.947898 0.771967 0.881395 0.922153 0.949862 0.877379 0.889212 0.8518615 0.8409940 0.9720930 0.8723593 0.9189846 0.892761 0.859954 0.920512 0.890468 0.894594 0.924956 1 0.868860 0.888516 -0.02131297 6 0.765418 0.810937 -0.0455186 0.962496 9.3485e-02 insignificant 1 1.0000000 insignificant 0.517499 0.80712455 insignificant 1 1.0000 insignificant 0.01392734 0.6872697 insignificant 1.00000 insignificant 0.868860 0.868771 0.0045056 6 0.765418 0.785593 -0.0201745 8.0426e-02 2.5372e-01 insignificant 6.1394e-01 1.000000 insignificant 3.4078e-02 0.83914450 weaklyHypermeth 3.0158e-01 1.00000 insignificant 0.0790511 1.2490e-01 insignificant 1.0000e+00 insignificant 0.868860 0.877483 -0.0236713 5 0.765418 0.798148 -0.0327301 4.2479e-01 6.4252e-02 insignificant 1.0000e+00 1.0000000 insignificant 3.5614e-01 4.5465e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.6723e-02 4.3167e-01 insignificant 1.0000e+00 insignificant 0.888516 0.868771 0.0269511 6 0.810937 0.785593 0.0253441 5.9949e-02 0.70903962 insignificant 4.5762e-01 1.00000 insignificant 6.6671e-02 0.83442703 insignificant 5.6984e-01 1.00000 insignificant 0.0651238 2.3006e-01 insignificant 1.0000e+00 insignificant 0.888516 0.877483 0.00075096 5 0.81094 0.798148 0.01278843 1.5171e-01 3.9805e-01 insignificant 1.0000e+00 1.000000 insignificant 2.6996e-01 0.35771197 insignificant 1.0000e+00 1.00000 insignificant 0.0127956 7.5353e-01 insignificant 1.00000000 insignificant 0.868771 0.877483 -0.0340534 5 0.785593 0.798148 -0.0125556 5.1046e-01 9.6905e-02 insignificant 1.0000e+00 8.3539e-01 insignificant 7.5630e-01 1.2767e-01 insignificant 1.00000000 1.00000000 insignificant -0.05232823 3.2256e-01 insignificant 1.0000000 insignificant chr16 28517874 28518874 136547 SULT1A2 ENSG00000197165 0.859333 179 7 0.75845 369 8 0.694204 202 8 0.799435 116 8 0.781452 191 8 0.817714 399 8 0.741764 209 8 0.780479 199 5 0.769017 269 8 0.763809 126 6 0.740976 318 8 0.686909 87 7 0.756692 303 8 0.716519 95 6 0.815521 235 7 0.741544 84 7 0.405678 25 2 0.712541 148 8 0.791578 422 8 0.754823 263 8 0.82642 132 8 0.880025 62 5 0.802468 228 8 0.911274 183 8 0.812500 33 4 0.845792 381 8 0.7015016 213 8 0.855693 122 7 0.753072 337 8 0.822974 540 8 0.853463 463 8 0.78524 294 8 0.5382563 310 8 0.428624 171 8 0.5675827 426 5 0.5469322 44 3 0.538120 289 8 0.520889 381 8 0.811798 196 8 0.777203 292 8 0.733732 108 7 0.701320 227 8 0.732185 150 8 0.826966 0.740407 0.673112 0.753424 0.741844 0.77487 0.710125 0.805497 0.744458 0.748058 0.721140 0.631185 0.714944 0.670049 0.775246 0.74947 0.558367 0.705027 0.764029 0.738206 0.813441 0.812618 0.789742 0.886029 0.750000 0.822395 0.687595 0.779777 0.730545 0.825079 0.831298 0.771956 0.4969124 0.4074089 0.5853092 0.4763904 0.5875097 0.475411 0.777042 0.714691 0.688778 0.657219 0.708630 6 0.718094 0.751339 -0.06098385 8 0.798011 0.805981 -0.0079700 0.998670 2.7831e-05 weaklyHypometh 1 0.0092771 weaklyHypometh 0.999318 0.00080470 weaklyHypometh 1 0.2547 insignificant -0.07644673 0.0062386 weaklyHypometh 1.00000 insignificant 0.718094 0.420728 0.2436444 8 0.798011 0.471821 0.3261906 2.4003e-27 1.0000e+00 hypermethylated 3.0004e-25 1.000000 hypermethylated 1.9376e-10 0.99999960 hypermethylated 1.9376e-08 1.00000 hypermethylated 0.2210210 7.6328e-07 hypermethylated 6.9389e-05 hypermethylated 0.718094 0.651593 0.0482179 8 0.798011 0.775284 0.0227274 1.1601e-01 8.2509e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.6396e-01 7.8958e-01 insignificant 1.0000e+00 1.00000000 insignificant -6.8258e-03 8.1095e-01 insignificant 1.0000e+00 insignificant 0.751339 0.420728 0.3083893 8 0.805981 0.471821 0.3341605 3.5600e-27 1.00000000 hypermethylated 5.9333e-25 1.00000 hypermethylated 1.1717e-12 1.00000000 hypermethylated 1.1717e-09 1.00000 hypermethylated 0.2974677 1.0593e-07 hypermethylated 1.3241e-05 hypermethylated 0.751339 0.651593 0.11292144 8 0.80598 0.775284 0.03069739 2.8395e-05 9.9650e-01 weaklyHypermeth 1.4197e-03 1.000000 weaklyHypermeth 5.1856e-03 0.98387814 weaklyHypermeth 1.9206e-01 1.00000 insignificant 0.0696209 2.0719e-02 weaklyHypermeth 0.66835277 insignificant 0.420728 0.651593 -0.1792547 8 0.471821 0.775284 -0.3034632 1.0000e+00 3.9664e-10 weaklyHypometh 1.0000e+00 6.6106e-08 weaklyHypometh 1.0000e+00 2.2761e-05 weaklyHypometh 1.00000000 0.00173944 weaklyHypometh -0.22784677 1.9001e-05 hypomethylated 0.0063337 hypomethylated chr16 28530869 28531869 136548 SULT1A1 ENSG00000196502 0.825542 195 8 0.73970 377 8 0.688642 178 8 0.745694 137 8 0.821195 174 8 0.782524 465 8 0.846642 180 8 0.726877 175 5 0.821701 254 8 0.854099 133 8 0.827326 274 8 0.799435 90 7 0.765876 222 8 0.841047 75 6 0.771149 195 7 0.623232 104 7 0.476190 29 2 0.646587 154 8 0.772263 406 8 0.820979 251 8 0.76839 134 8 0.754541 63 5 0.810729 194 8 0.833698 187 8 0.872222 30 2 0.840904 341 8 0.7401534 216 8 0.840806 109 7 0.854215 346 8 0.860778 478 8 0.851907 374 8 0.82857 283 8 0.5185950 257 8 0.381825 189 8 0.5487869 397 5 0.4713542 47 2 0.654543 259 8 0.421602 430 8 0.804115 209 8 0.762493 306 8 0.683110 111 7 0.743571 272 8 0.766989 191 8 0.817641 0.706257 0.646806 0.693590 0.775803 0.75339 0.802152 0.762182 0.780650 0.803269 0.796612 0.753790 0.721558 0.799874 0.689474 0.55611 0.580877 0.674271 0.727237 0.776529 0.787021 0.623584 0.762748 0.778367 0.806073 0.776259 0.699780 0.769518 0.831865 0.815228 0.831830 0.786563 0.4822592 0.3395936 0.4605963 0.3496964 0.6301225 0.408259 0.764125 0.711700 0.621147 0.674027 0.728213 3 0.721731 0.767695 -0.06341248 8 0.752115 0.846714 -0.0945993 0.999667 2.3293e-05 weaklyHypometh 1 0.0092771 weaklyHypometh 0.999651 0.00056823 weaklyHypometh 1 0.2547 insignificant -0.06157497 0.0171214 weaklyHypometh 1.00000 insignificant 0.721731 0.421786 0.2489543 8 0.752115 0.481206 0.2709082 4.8780e-28 1.0000e+00 hypermethylated 6.9686e-26 1.000000 hypermethylated 7.8282e-13 0.99999994 hypermethylated 1.3545e-10 1.00000 hypermethylated 0.2603838 4.1678e-04 hypermethylated 1.3893e-02 hypermethylated 0.721949 0.665748 0.0357552 8 0.783629 0.758250 0.0253787 7.3144e-02 6.5376e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.0064e-01 7.8421e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.7794e-03 7.9055e-01 insignificant 1.0000e+00 insignificant 0.767695 0.421786 0.3134320 8 0.846714 0.481206 0.3655075 2.9272e-27 1.00000000 hypermethylated 5.8545e-25 1.00000 hypermethylated 3.1085e-12 1.00000000 hypermethylated 1.5542e-09 1.00000 hypermethylated 0.3219588 2.4358e-04 hypermethylated 9.3685e-03 hypermethylated 0.767357 0.665748 0.10784520 8 0.82755 0.758250 0.06930282 1.0111e-05 9.9583e-01 weaklyHypermeth 5.6776e-04 1.000000 weaklyHypermeth 1.0352e-03 0.99859245 weaklyHypermeth 5.1762e-02 1.00000 weaklyHypermeth 0.0693544 1.9946e-02 weaklyHypermeth 0.66487240 insignificant 0.422222 0.665748 -0.1897232 8 0.510107 0.758250 -0.2481431 1.0000e+00 3.0431e-09 weaklyHypometh 1.0000e+00 3.8038e-07 weaklyHypometh 1.0000e+00 2.4352e-05 weaklyHypometh 1.00000000 0.00173944 weaklyHypometh -0.25260437 6.6842e-04 hypomethylated 0.0536155 hypomethylated chr16 28732368 28733368 136549 ENSG00000196993 0.629705 190 7 0.60721 364 7 0.590476 121 7 0.591256 181 7 0.484817 142 7 0.698416 107 4 0.598075 2159 7 0.573032 1802 7 0.574830 63 4 0.566352 119 7 0.578516 204 7 0.633673 84 7 0.351677 137 7 0.592445 103 7 0.600000 167 7 0.515136 84 7 1.000000 1 0 0.665420 338 7 0.621948 88 7 0.561339 152 4 0.42652 56 4 0.685714 26 1 0.502802 192 7 0.620261 75 7 0.591486 210 7 0.610788 129 7 0.5489074 68 6 0.730442 38 4 0.675865 192 7 0.707310 104 7 0.584474 109 7 0.65253 165 7 0.5857143 171 7 0.667314 96 7 0.6785714 59 7 0.6428571 44 4 0.563565 263 7 0.578828 79 5 0.729021 219 7 0.578698 196 4 0.681731 224 7 0.543928 94 7 0.577771 144 7 0.585851 0.493996 0.543750 0.559539 0.457239 0.66498 0.681841 0.655649 0.539301 0.532470 0.509058 0.560975 0.321167 0.560662 0.502028 0.50328 NA 0.658926 0.547926 0.522595 0.359584 0.715104 0.476633 0.567851 0.593429 0.517167 0.444164 0.779948 0.627955 0.638194 0.534193 0.620301 0.5788889 0.6718042 0.6592882 0.7656250 0.5248810 0.606707 0.650978 0.468838 0.652202 0.531697 0.575282 1 0.652891 0.622434 -0.00839503 7 0.583032 0.608128 -0.0250961 0.131996 5.9059e-04 weaklyHypometh 1 0.1476463 insignificant 0.430264 0.35118424 insignificant 1 1.0000 insignificant -0.00970897 0.7929765 insignificant 1.00000 insignificant 0.652891 0.655899 -0.0172728 7 0.583032 0.593913 -0.0108806 2.7160e-02 6.4856e-02 inconclusive 2.1728e-01 1.000000 insignificant 3.1559e-01 0.04146580 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0177587 5.9821e-01 insignificant 1.0000e+00 insignificant 0.652891 0.709236 -0.0461695 7 0.583032 0.599341 -0.0163085 2.6126e-01 6.1426e-05 weaklyHypometh 1.0000e+00 0.0204755 weaklyHypometh 7.8477e-01 1.3738e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.0513e-02 6.5238e-01 insignificant 1.0000e+00 insignificant 0.622434 0.655899 -0.0053861 7 0.608128 0.593913 0.0142155 3.3993e-01 0.57692894 insignificant 1.0000e+00 1.00000 insignificant 5.0395e-01 0.14499757 insignificant 1.0000e+00 1.00000 insignificant -0.0080498 8.0779e-01 insignificant 1.0000e+00 insignificant 0.622434 0.709236 -0.00780081 7 0.60813 0.599341 0.00878757 7.2454e-01 2.5033e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7590e-01 0.28869933 insignificant 1.0000e+00 1.00000 insignificant -0.0108044 8.1005e-01 insignificant 1.00000000 insignificant 0.655899 0.709236 -0.0093577 7 0.593913 0.599341 -0.0054279 6.7503e-01 7.1163e-02 insignificant 1.0000e+00 6.6507e-01 insignificant 2.5060e-01 7.3957e-01 insignificant 1.00000000 1.00000000 insignificant -0.00275469 9.4806e-01 insignificant 1.0000000 insignificant chr16 28732531 28733531 136550 ENSG00000196993 0.640278 197 8 0.61464 370 8 0.632051 134 8 0.642349 202 8 0.549215 150 8 0.736114 124 5 0.639387 2173 8 0.626403 1808 8 0.627976 67 4 0.620558 125 8 0.617313 231 8 0.554464 85 7 0.432718 140 7 0.643389 106 7 0.650000 173 8 0.515136 84 7 1.000000 1 0 0.707242 342 7 0.669204 89 7 0.607243 166 5 0.49821 62 5 0.712500 36 2 0.564952 197 8 0.667729 78 7 0.619402 237 8 0.659440 136 8 0.5896690 76 7 0.739137 43 5 0.716382 193 7 0.743897 112 8 0.636415 127 8 0.69596 189 8 0.6236111 180 8 0.691042 103 8 0.6785714 59 7 0.6708333 59 5 0.618120 278 8 0.631475 92 6 0.757211 241 8 0.631361 223 5 0.707626 251 8 0.543928 94 7 0.622485 175 8 0.589110 0.498379 0.553378 0.570718 0.471014 0.67349 0.688103 0.664389 0.550994 0.544337 0.518698 0.546737 0.338396 0.571813 0.514666 0.51314 NA 0.667583 0.559400 0.532899 0.375839 0.719797 0.489917 0.578820 0.599048 0.529421 0.455099 0.780457 0.637398 0.647377 0.546015 0.629938 0.5867569 0.6765083 0.6659697 0.7681895 0.5369398 0.616689 0.658683 0.482319 0.658210 0.542181 0.584424 1 0.659524 0.648048 -0.00802163 8 0.626613 0.648916 -0.0223027 0.170213 1.0393e-03 weaklyHypometh 1 0.2078692 insignificant 0.505356 0.37450384 insignificant 1 1.0000 insignificant -0.01735677 0.5971804 insignificant 1.00000 insignificant 0.659524 0.677043 -0.0162089 8 0.626613 0.636199 -0.0095863 3.9240e-02 8.6733e-02 inconclusive 3.0656e-01 1.000000 insignificant 2.6186e-01 0.07415974 insignificant 1.0000e+00 1.00000 insignificant -0.0159912 5.6405e-01 insignificant 1.0000e+00 insignificant 0.659524 0.734756 -0.0446810 8 0.626613 0.642414 -0.0158010 3.2421e-01 1.1083e-04 weaklyHypometh 1.0000e+00 0.0277072 weaklyHypometh 7.3954e-01 2.0222e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.6238e-02 7.2204e-01 insignificant 1.0000e+00 insignificant 0.648048 0.677043 -0.0047430 8 0.648916 0.636199 0.0127164 3.8280e-01 0.62293885 insignificant 1.0000e+00 1.00000 insignificant 4.3203e-01 0.22175143 insignificant 1.0000e+00 1.00000 insignificant 0.0013656 9.5758e-01 insignificant 1.0000e+00 insignificant 0.648048 0.734756 -0.00795800 8 0.64892 0.642414 0.00650175 7.7170e-01 2.7654e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1921e-01 0.38944541 insignificant 1.0000e+00 1.00000 insignificant 0.0011189 9.7987e-01 insignificant 1.00000000 insignificant 0.677043 0.734756 -0.0095488 8 0.636199 0.642414 -0.0062146 7.3411e-01 8.4397e-02 insignificant 1.0000e+00 7.4032e-01 insignificant 3.4668e-01 6.9760e-01 insignificant 1.00000000 1.00000000 insignificant -0.00024671 9.9520e-01 insignificant 1.0000000 insignificant chr16 28801219 28802219 136551 ATP2A1 ENSG00000196296 0.602000 515 16 0.40585 411 16 0.530270 514 18 0.522192 600 16 0.463485 282 16 0.579900 640 18 0.565037 384 19 0.544646 476 19 0.588222 408 16 0.577170 539 16 0.628781 506 16 0.561161 293 15 0.493743 525 15 0.580828 293 11 0.478558 522 16 0.479188 239 12 0.603391 61 6 0.493414 714 17 0.557329 579 16 0.548693 473 18 0.66507 208 14 0.472736 351 13 0.566562 442 19 0.526757 333 17 0.537985 317 19 0.631128 572 17 0.5146936 570 17 0.566493 251 14 0.539085 466 16 0.503852 680 18 0.401205 513 18 0.49422 613 17 0.3329973 446 20 0.439355 455 15 0.1999764 298 11 0.2108507 218 13 0.413088 429 21 0.294380 476 18 0.477885 619 17 0.483361 739 17 0.443431 506 15 0.437162 522 16 0.545949 668 19 0.650220 0.562897 0.619266 0.664481 0.611106 0.64373 0.674303 0.643355 0.589558 0.658994 0.733508 0.693253 0.630754 0.664027 0.595778 0.57951 0.643703 0.641333 0.652663 0.565863 0.696770 0.561668 0.707395 0.659589 0.622987 0.650358 0.616275 0.688109 0.588304 0.607953 0.547583 0.632260 0.4243808 0.5203052 0.3383141 0.3257275 0.5563170 0.422890 0.570696 0.533570 0.533780 0.501534 0.644683 14 0.627313 0.603837 0.01930417 16 0.547649 0.521061 0.0265878 0.038952 9.7144e-01 weaklyHypermeth 1 1.0000000 insignificant 0.551566 0.82659773 insignificant 1 1.0000 insignificant 0.00521040 0.8280797 insignificant 1.00000 insignificant 0.627313 0.366064 0.2249142 16 0.547649 0.312927 0.2347217 5.2996e-34 1.0000e+00 hypermethylated 1.3249e-31 1.000000 hypermethylated 1.0796e-16 1.00000000 hypermethylated 1.0796e-13 1.00000 hypermethylated 0.2250850 1.8939e-03 weaklyHypermeth 4.5094e-02 weaklyHypermeth 0.627370 0.475115 0.0853776 16 0.549555 0.472424 0.0771310 3.9992e-09 9.7386e-01 weaklyHypermeth 3.0763e-07 1.0000000 weaklyHypermeth 2.7486e-05 9.4748e-01 weaklyHypermeth 1.8324e-03 1.00000000 weaklyHypermeth 6.2635e-02 2.7256e-02 weaklyHypermeth 8.5174e-01 insignificant 0.603837 0.366064 0.2035688 18 0.521061 0.312927 0.2081338 1.4464e-15 1.00000000 hypermethylated 7.6125e-14 1.00000 hypermethylated 6.8491e-11 0.99999998 hypermethylated 8.5613e-09 1.00000 hypermethylated 0.2198746 1.5456e-03 weaklyHypermeth 4.0672e-02 weaklyHypermeth 0.603990 0.475115 0.06231258 17 0.52857 0.472424 0.05614637 1.7575e-02 9.2144e-01 weaklyHypermeth 4.1846e-01 1.000000 insignificant 1.4585e-02 0.98441113 weaklyHypermeth 4.6017e-01 1.00000 insignificant 0.0574250 6.1612e-02 insignificant 1.00000000 insignificant 0.366379 0.475115 -0.1315419 17 0.325444 0.472424 -0.1469795 1.0000e+00 1.3036e-07 weaklyHypometh 1.0000e+00 7.6680e-06 weaklyHypometh 1.0000e+00 9.9733e-05 weaklyHypometh 1.00000000 0.00524911 weaklyHypometh -0.16244960 8.6406e-03 weaklyHypometh 0.2057286 insignificant chr16 28897306 28898306 136552 SPNS1 ENSG00000169682 0.950172 332 7 0.87688 186 8 0.908317 288 8 0.954970 369 6 0.939904 108 7 0.910742 235 7 0.938004 216 7 0.888039 119 6 0.874809 150 7 0.947687 160 7 0.937951 159 7 0.920180 110 7 0.960119 99 7 NA 0 0 0.920965 177 6 0.941252 145 7 0.963887 159 7 0.900510 391 6 0.958617 106 7 0.953438 236 6 0.79256 63 6 0.921932 124 7 0.891708 281 8 0.942979 86 7 0.971065 103 6 0.928603 170 8 0.8875623 97 7 0.687271 61 6 0.845442 97 6 0.965547 200 8 0.960694 183 8 0.91399 229 7 0.9300426 128 8 0.964103 151 7 0.6950549 107 4 0.9326923 90 6 0.901697 99 7 0.945556 131 8 0.984396 289 6 0.972896 286 7 0.971423 344 6 0.943503 394 6 0.863038 328 7 0.958190 0.884356 0.925589 0.946193 0.939334 0.87310 0.921616 0.917891 0.870605 0.952008 0.942170 0.905359 0.956932 NA 0.911283 0.94153 0.951737 0.947346 0.969723 0.941120 0.916353 0.907660 0.880939 0.959547 0.976820 0.914899 0.920300 0.875225 0.831754 0.960812 0.949068 0.893091 0.9365447 0.9649873 0.6875214 0.9375987 0.9679189 0.932573 0.977556 0.963115 0.966689 0.979385 0.987115 6 0.930307 0.919479 0.01024983 7 0.924047 0.925865 -0.0018179 0.053923 2.9509e-01 insignificant 1 1.0000000 insignificant 0.147825 0.51159974 insignificant 1 1.0000 insignificant 0.03631447 0.1678380 insignificant 1.00000 insignificant 0.930307 0.933239 -0.0170462 7 0.924047 0.932149 -0.0081021 7.6961e-01 1.2857e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7805e-01 0.01664040 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.0339028 4.4778e-01 insignificant 1.0000e+00 insignificant 0.930307 0.973187 -0.0405595 6 0.924047 0.949465 -0.0254179 9.8458e-01 1.2128e-05 weaklyHypometh 1.0000e+00 0.0060642 weaklyHypometh 9.8712e-01 2.3291e-04 weaklyHypometh 1.0000e+00 0.11645611 insignificant -1.8291e-02 4.6455e-01 insignificant 1.0000e+00 insignificant 0.918983 0.932011 -0.0187424 8 0.878547 0.884133 -0.0055859 6.1062e-01 0.17868235 insignificant 1.0000e+00 1.00000 insignificant 9.0296e-01 0.03692701 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0024117 9.6053e-01 insignificant 1.0000e+00 insignificant 0.919479 0.973187 -0.05361452 6 0.92587 0.949465 -0.02359999 9.8832e-01 1.3938e-05 weaklyHypometh 1.0000e+00 0.013938 weaklyHypometh 8.6490e-01 0.00060214 weaklyHypometh 1.0000e+00 0.30107 insignificant -0.0546053 1.1805e-01 insignificant 1.00000000 insignificant 0.933239 0.973187 -0.0284957 6 0.932149 0.949465 -0.0173158 9.7567e-01 1.9675e-02 weaklyHypometh 1.0000e+00 2.2877e-01 insignificant 5.1216e-01 5.7148e-01 insignificant 1.00000000 1.00000000 insignificant -0.05219363 2.9519e-01 insignificant 1.0000000 insignificant chr16 29104450 29105450 136562 ENSG00000172533 0.915357 258 7 0.81430 237 7 0.841410 171 6 0.948738 204 4 0.796062 128 7 0.891368 283 7 0.818524 145 7 0.884821 193 7 0.860504 249 7 0.951170 228 7 0.880384 292 7 0.830178 153 7 0.844432 289 7 0.839323 85 4 0.914299 233 7 0.855477 95 7 0.921429 85 7 0.898281 268 5 0.901737 230 7 0.847746 182 7 0.90450 102 6 0.781445 94 4 0.908570 205 7 0.879321 129 7 0.939474 66 4 0.942569 173 7 0.8206909 127 5 0.853615 167 7 0.872980 195 7 0.905875 216 7 0.896118 189 7 0.90546 159 7 0.4477906 227 7 0.320247 178 7 0.2936508 145 4 0.6562500 25 3 0.390806 187 7 0.739788 215 7 0.820180 214 4 0.893807 202 6 0.922708 179 4 0.884151 173 4 0.768952 180 4 0.892119 0.857038 0.826267 0.900295 0.783529 0.91001 0.840859 0.818302 0.881548 0.919445 0.869315 0.814069 0.813646 0.833120 0.913817 0.78898 0.878557 0.832583 0.859056 0.821351 0.906021 0.847929 0.866871 0.883219 0.933721 0.898257 0.750514 0.881194 0.821056 0.921213 0.859811 0.889406 0.4436963 0.2663071 0.2677462 0.6533839 0.4057410 0.745776 0.796318 0.852450 0.876683 0.820311 0.600748 4 0.871756 0.873765 -0.00676753 7 0.870864 0.880041 -0.0091763 0.831058 2.9742e-01 insignificant 1 1.0000000 insignificant 0.965007 0.05107541 insignificant 1 1.0000 insignificant -0.01144136 0.5035130 insignificant 1.00000 insignificant 0.871756 0.421699 0.4493580 7 0.870864 0.443667 0.4271971 1.6518e-37 1.0000e+00 hypermethylated 5.5061e-35 1.000000 hypermethylated 8.1267e-13 0.99999997 hypermethylated 1.3545e-10 1.00000 hypermethylated 0.3980218 2.9261e-03 weaklyHypermeth 6.2257e-02 weaklyHypermeth 0.871756 0.821730 0.0593201 4 0.870864 0.862240 0.0086245 4.7556e-02 5.7097e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.3284e-01 3.1088e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.4817e-02 6.3746e-01 lowCoverage 1.0000e+00 lowCoverage 0.873765 0.421699 0.4388629 7 0.880041 0.443667 0.4363734 7.6343e-24 1.00000000 hypermethylated 1.0906e-21 1.00000 hypermethylated 6.6647e-11 0.99999998 hypermethylated 8.5613e-09 1.00000 hypermethylated 0.4094631 2.4358e-03 weaklyHypermeth 5.5360e-02 weaklyHypermeth 0.873765 0.821730 0.06255663 4 0.88004 0.862240 0.01780083 2.8322e-02 7.0281e-01 lowCoverage 6.2938e-01 1.000000 lowCoverage 9.8541e-02 0.58507172 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0262587 4.2904e-01 lowCoverage 1.00000000 lowCoverage 0.421699 0.821730 -0.3700601 4 0.443667 0.862240 -0.4185726 1.0000e+00 3.0457e-10 lowCoverage 1.0000e+00 6.6058e-08 lowCoverage 1.0000e+00 2.5800e-06 lowCoverage 1.00000000 0.00051600 lowCoverage -0.38320439 2.5807e-03 lowCoverage 0.0992562 lowCoverage chr16 29716991 29717991 136589 KIF22 ENSG00000079616 0.958747 408 6 0.89841 141 6 0.882041 158 6 0.953582 472 6 0.896739 158 7 0.946502 390 6 0.942597 206 6 0.871616 223 7 0.846806 269 7 0.934723 160 7 0.886994 227 7 0.937118 148 5 0.822266 191 6 0.976010 111 6 0.913006 197 7 0.835061 104 5 0.900000 80 5 0.954852 550 6 0.866911 174 7 0.973792 285 6 0.94972 73 6 0.945716 159 6 0.867487 225 7 0.860886 150 6 0.956315 239 6 0.908294 204 6 0.9214631 150 6 0.993056 132 4 0.929269 227 6 0.842324 270 6 0.819252 176 6 0.97586 342 6 0.9401248 168 6 0.885573 205 6 0.8333333 137 5 0.9629630 80 6 0.869158 194 7 0.974617 199 6 0.949351 355 6 0.957964 336 6 0.956372 308 6 0.968707 338 7 0.970924 341 6 0.958216 0.941763 0.843773 0.955839 0.926240 0.92011 0.908734 0.951827 0.943295 0.968316 0.909968 0.992674 0.933327 0.969697 0.917189 0.89281 0.985492 0.944325 0.978159 0.969907 0.904893 0.944306 0.937985 0.887552 0.940934 0.973106 0.950925 0.994505 0.887929 0.975566 0.936361 0.978072 0.9069948 0.8120426 0.9538462 0.9533578 0.8847432 0.980077 0.952352 0.947868 0.965874 0.964710 0.972888 4 0.933362 0.945888 -0.00203690 6 0.896329 0.892032 0.0042975 0.698792 5.5501e-01 insignificant 1 1.0000000 insignificant 0.837311 0.46884904 insignificant 1 1.0000 insignificant -0.00424786 0.8255139 insignificant 1.00000 insignificant 0.933362 0.918616 0.0226600 6 0.896329 0.925515 -0.0291861 1.9056e-01 1.5946e-01 insignificant 1.0000e+00 1.000000 insignificant 5.6381e-01 0.13581253 insignificant 1.0000e+00 1.00000 insignificant -0.0010729 9.6737e-01 insignificant 1.0000e+00 insignificant 0.933362 0.963647 -0.0179247 6 0.896329 0.965513 -0.0691837 8.6873e-01 6.2790e-02 insignificant 1.0000e+00 1.0000000 insignificant 6.3855e-01 1.8288e-01 insignificant 1.0000e+00 1.00000000 insignificant -5.0775e-02 1.4088e-04 weaklyHypometh 1.2807e-02 weaklyHypometh 0.945888 0.918616 0.0270757 6 0.892032 0.925515 -0.0334836 2.8474e-01 0.34650990 insignificant 1.0000e+00 1.00000 insignificant 6.7850e-01 0.21703684 insignificant 1.0000e+00 1.00000 insignificant 0.0031749 9.1224e-01 insignificant 1.0000e+00 insignificant 0.945888 0.963647 -0.01559500 6 0.89203 0.965513 -0.07348121 6.9032e-01 1.8691e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1174e-01 0.38809399 insignificant 1.0000e+00 1.00000 insignificant -0.0465271 1.4881e-02 weaklyHypometh 0.53148014 insignificant 0.918616 0.963647 -0.0446285 6 0.925515 0.965513 -0.0399976 3.4311e-01 3.2056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9910e-01 8.2269e-01 insignificant 1.00000000 1.00000000 insignificant -0.04970208 8.4507e-02 insignificant 0.9086722 insignificant chr16 29973210 29974210 136597 ALDOA ENSG00000149925 0.432887 260 5 0.33299 189 5 0.470699 148 5 0.248532 281 5 0.463669 101 5 0.452502 320 5 0.436999 185 5 0.443226 117 5 0.450000 85 5 0.437672 82 4 0.466837 186 5 0.420498 70 4 0.266250 88 4 0.531250 27 3 0.332121 93 4 0.632099 71 5 0.107143 64 2 0.491752 304 4 0.365865 207 4 0.348944 234 5 0.50574 52 4 0.000000 22 2 0.378362 105 5 0.485714 63 5 0.244271 256 2 0.436015 199 5 0.4213262 103 5 0.499573 46 3 0.146363 174 4 0.375779 228 5 0.389313 221 5 0.55615 270 5 0.3533333 150 5 0.467550 178 5 0.5860465 125 4 0.4777614 213 3 0.555030 110 5 0.425967 237 5 0.369858 271 5 0.272443 226 5 0.429677 271 5 0.454575 229 3 0.384144 199 5 0.276941 0.255466 0.246435 0.168028 0.275988 0.25547 0.262955 0.261667 0.263799 0.326061 0.338416 0.247867 0.164205 0.264126 0.297085 0.45478 0.211474 0.305733 0.151754 0.212858 0.302740 0.071989 0.287710 0.245942 0.160452 0.232075 0.331751 0.221911 0.181311 0.180209 0.218145 0.302605 0.1712121 0.2873118 0.2695560 0.2668361 0.4375343 0.241577 0.191929 0.164858 0.138783 0.183325 0.187382 2 0.248633 0.264097 0.00525997 5 0.529509 0.346587 0.1829219 0.609021 8.6020e-01 insignificant 1 1.0000000 insignificant 0.570019 0.99644160 insignificant 1 1.0000 insignificant 0.03671302 0.5016416 lowCoverage 1.00000 lowCoverage 0.246527 0.340573 -0.0763455 5 0.516485 0.572590 -0.0561048 5.6514e-01 1.7297e-04 weaklyHypometh 1.0000e+00 0.057655 weaklyHypometh 5.2904e-01 0.19288423 insignificant 1.0000e+00 1.00000 insignificant -0.0710180 1.2603e-01 lowCoverage 1.0000e+00 lowCoverage 0.248391 0.151338 0.0505042 5 0.470697 0.258419 0.2122779 7.0967e-02 7.4292e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9810e-02 6.0848e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.4457e-02 5.5749e-01 lowCoverage 1.0000e+00 lowCoverage 0.264706 0.340573 -0.0757482 5 0.519880 0.572590 -0.0527099 6.6245e-01 0.01014342 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.3365e-01 0.18830093 insignificant 1.0000e+00 1.00000 insignificant -0.1077310 8.4266e-02 lowCoverage 8.9645e-01 lowCoverage 0.263673 0.151338 0.04516699 5 0.26491 0.258419 0.00649076 1.9693e-01 8.5565e-01 insignificant 1.0000e+00 1.000000 insignificant 4.8615e-01 0.59207260 insignificant 1.0000e+00 1.00000 insignificant -0.0122557 8.3163e-01 lowCoverage 1.00000000 lowCoverage 0.339921 0.151718 0.1241486 5 0.487108 0.413471 0.0736371 2.4823e-02 3.1034e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.7525e-02 2.8756e-01 insignificant 1.00000000 1.00000000 insignificant 0.09547531 7.1403e-02 lowCoverage 0.7997508 lowCoverage chr16 30822734 30823734 136611 CTF1 ENSG00000150281 0.930306 186 6 0.79662 243 8 0.947310 206 7 0.961165 274 7 0.830165 142 6 0.943106 495 7 0.946265 91 6 0.918938 195 6 0.827126 85 6 0.811066 171 6 0.925817 323 8 0.868056 51 6 0.971368 165 6 0.902015 81 6 0.953446 222 6 0.977778 48 3 NA 0 0 0.904120 296 6 0.924494 349 7 0.966421 413 6 0.96389 112 6 1.000000 13 0 0.872388 193 7 0.971993 119 6 0.952083 45 2 0.931324 270 7 0.7474837 269 6 0.776190 34 4 0.971503 372 7 0.947414 332 8 0.900027 386 8 0.94509 346 7 0.9530100 238 6 0.986850 430 7 0.9231188 301 6 1.0000000 1 0 0.843092 133 6 0.975855 417 7 0.957511 276 6 0.945695 237 7 0.966667 80 6 0.943749 267 6 0.953382 181 7 0.921357 0.883125 0.925628 0.966769 0.938551 0.93093 0.940694 0.923896 0.813524 0.942795 0.939487 0.868859 0.964922 0.900650 0.957254 0.97460 NA 0.893506 0.913048 0.957726 0.948526 1.000000 0.946977 0.965057 0.944331 0.913101 0.870784 0.751992 0.962926 0.922332 0.917279 0.937766 0.9104021 0.9833612 0.8911204 NA 0.9601146 0.971660 0.953025 0.958698 0.963719 0.937092 0.943278 2 0.929120 0.931353 -0.00295898 6 0.896487 0.899329 -0.0028424 0.899099 2.3141e-01 insignificant 1 1.0000000 insignificant 0.989570 0.26604966 insignificant 1 1.0000 insignificant -0.00412882 0.8771908 insignificant 1.00000 insignificant 0.929120 0.955921 -0.0270914 6 0.896487 0.953939 -0.0574529 9.9406e-01 6.0627e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9725e-01 0.00430564 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0361673 2.1476e-01 insignificant 1.0000e+00 insignificant 0.929067 0.948127 -0.0173236 6 0.813153 0.958240 -0.1450871 9.4255e-01 1.0138e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.2896e-01 5.9725e-02 insignificant 1.0000e+00 1.00000000 insignificant -4.2580e-02 5.4270e-03 weaklyHypometh 2.4045e-01 insignificant 0.931353 0.955921 -0.0229393 7 0.899329 0.953939 -0.0546105 8.8357e-01 0.09225790 insignificant 1.0000e+00 1.00000 insignificant 8.1801e-01 0.11833077 insignificant 1.0000e+00 1.00000 insignificant -0.0320385 3.4625e-01 insignificant 1.0000e+00 insignificant 0.931645 0.948027 -0.01558830 6 0.91800 0.953020 -0.03502526 5.8614e-01 3.5165e-01 insignificant 1.0000e+00 1.000000 insignificant 5.7016e-01 0.42240021 insignificant 1.0000e+00 1.00000 insignificant -0.0384516 1.2459e-01 insignificant 1.00000000 insignificant 0.955892 0.948027 0.0094509 6 0.948182 0.953020 -0.0048384 7.2053e-02 9.1102e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4583e-02 9.5202e-01 insignificant 1.00000000 1.00000000 insignificant -0.00641316 7.9864e-01 insignificant 1.0000000 insignificant chr16 30846613 30847613 136613 FBXL19 ENSG00000099364 0.926100 237 6 0.84825 191 6 0.782761 182 6 0.915815 255 6 0.832884 117 6 0.890732 353 6 0.806023 145 6 0.854822 216 6 0.857506 208 6 0.926204 247 6 0.937329 144 6 0.857099 115 6 0.910682 310 6 0.823951 168 6 0.909207 246 6 0.743040 68 4 0.673601 51 4 0.875758 350 6 0.894969 163 6 0.921793 258 6 0.93287 88 6 0.915556 176 6 0.909160 219 6 0.807268 110 6 0.893290 127 6 0.911251 226 6 0.8516478 243 6 0.867094 145 6 0.818735 210 6 0.927648 179 6 0.896984 212 6 0.90224 304 6 0.7607996 188 6 0.690631 164 6 0.8666667 69 5 0.9144120 73 6 0.802904 138 6 0.857368 172 6 0.938186 259 6 0.953953 250 6 0.952752 216 6 0.944711 261 6 0.952596 296 6 0.923715 0.857933 0.795454 0.916070 0.840115 0.90140 0.815117 0.869175 0.855305 0.926587 0.937257 0.836523 0.916991 0.837538 0.908931 0.70686 0.681254 0.882892 0.892641 0.926186 0.939567 0.923100 0.911289 0.804029 0.899387 0.907361 0.858792 0.881391 0.843464 0.928391 0.899118 0.903550 0.7825106 0.6751028 0.8626039 0.9188890 0.8110217 0.869505 0.945576 0.956744 0.951254 0.944031 0.955661 6 0.883946 0.895042 -0.01174072 6 0.877251 0.890164 -0.0129128 0.692693 5.7164e-02 insignificant 1 1.0000000 insignificant 0.831921 0.01086208 weaklyHypometh 1 1.0000 insignificant -0.02671879 0.1776432 insignificant 1.00000 insignificant 0.883946 0.810945 0.0713554 6 0.877251 0.799810 0.0774410 6.0805e-04 9.9189e-01 weaklyHypermeth 5.8467e-03 1.000000 weaklyHypermeth 3.1230e-01 0.48128203 insignificant 1.0000e+00 1.00000 insignificant 0.0439626 2.6576e-01 insignificant 1.0000e+00 insignificant 0.883946 0.949298 -0.0731249 6 0.877251 0.948473 -0.0712214 9.9999e-01 7.9975e-06 weaklyHypometh 1.0000e+00 0.0060642 weaklyHypometh 9.9987e-01 5.4788e-07 weaklyHypometh 1.0000e+00 0.00054788 weaklyHypometh -8.9013e-02 1.2583e-05 weaklyHypometh 1.2583e-03 weaklyHypometh 0.895042 0.810945 0.0862833 6 0.890164 0.799810 0.0903537 8.7547e-04 0.99732809 weaklyHypermeth 9.2155e-03 1.00000 weaklyHypermeth 1.4087e-01 0.87672940 insignificant 1.0000e+00 1.00000 insignificant 0.0706813 8.8863e-02 insignificant 9.3540e-01 insignificant 0.895042 0.949298 -0.05787702 6 0.89016 0.948473 -0.05830859 9.9399e-01 6.2220e-05 weaklyHypometh 1.0000e+00 0.031110 weaklyHypometh 9.8919e-01 0.00012271 weaklyHypometh 1.0000e+00 0.12271 insignificant -0.0622946 2.5069e-04 weaklyHypometh 0.02089104 weaklyHypometh 0.810945 0.949298 -0.1404365 6 0.799810 0.948473 -0.1486623 9.9999e-01 1.5827e-04 weaklyHypometh 1.0000e+00 3.3675e-03 weaklyHypometh 9.9989e-01 4.0731e-03 weaklyHypometh 1.00000000 0.08666224 weaklyHypometh -0.13297593 9.9917e-03 weaklyHypometh 0.2270832 insignificant chr16 30967896 30968896 136615 STX4 ENSG00000103496 0.710505 65 5 0.67256 49 5 0.595455 27 2 0.692717 58 4 0.865079 18 1 0.792764 120 5 0.656250 37 4 0.746729 35 2 0.777778 10 0 0.914286 20 2 0.764827 84 5 0.750000 12 0 0.864286 40 2 0.875000 5 0 0.700000 22 3 0.666667 5 0 0.250000 7 0 0.623785 89 5 0.821429 48 4 0.777848 101 5 0.55556 10 1 0.750000 8 0 0.737778 38 3 0.619048 21 2 0.800000 21 1 0.902609 51 5 0.8333333 10 0 0.900000 9 0 0.740476 33 3 0.818362 63 3 0.762987 67 5 0.77289 147 5 0.6619048 56 5 0.865152 37 3 0.6570513 53 3 1.0000000 7 0 0.791667 22 2 0.679592 55 5 0.856140 47 4 0.780556 46 2 0.733333 25 2 0.579167 22 3 0.644444 45 4 0.744108 0.547241 0.608225 0.765640 0.741497 0.72527 0.666667 0.845107 0.904762 0.877551 0.795635 0.619048 0.877551 0.787197 0.838095 0.97226 0.210355 0.699405 0.823129 0.813853 0.555556 0.841725 0.735450 0.809524 0.714286 0.844306 0.857143 0.857143 0.736395 0.768218 0.854618 0.753061 0.7857143 0.8614719 0.7823565 0.7938450 0.7301587 0.809524 0.935255 0.984127 0.904762 0.684524 0.604497 0 0.761737 0.809623 -0.04540279 5 0.639136 0.703328 -0.0641915 0.982737 4.3919e-02 weaklyHypometh 1 1.0000000 insignificant 0.985000 0.27658920 insignificant 1 1.0000 insignificant -0.04018862 0.3599536 lowCoverage 1.00000 lowCoverage 0.763529 0.786957 -0.0199161 3 0.730441 0.723747 0.0066948 5.4733e-01 1.7752e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.9679e-01 0.30165825 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0499960 4.6002e-01 lowCoverage 1.0000e+00 lowCoverage 0.765777 0.830601 -0.0271890 4 0.736797 0.662701 0.0740965 3.7249e-01 2.9447e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.9962e-01 7.2918e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 7.1702e-03 9.0536e-01 lowCoverage 1.0000e+00 lowCoverage 0.811321 0.786957 0.0159510 3 0.803803 0.723747 0.0800566 1.4858e-01 0.39349981 lowCoverage 1.0000e+00 1.00000 lowCoverage 1.8694e-01 0.56670656 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0098074 8.8092e-01 lowCoverage 1.0000e+00 lowCoverage 0.811040 0.830601 0.02620179 4 0.79888 0.662701 0.13618089 3.9253e-02 5.5695e-01 lowCoverage 7.7054e-01 1.000000 lowCoverage 6.7521e-02 0.88083898 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0473589 4.3337e-01 lowCoverage 1.00000000 lowCoverage 0.791111 0.830601 -0.0067832 2 0.744371 0.662701 0.0816705 4.7394e-02 6.2869e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.4138e-01 6.7623e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.05716627 4.6280e-01 lowCoverage 1.0000000 lowCoverage chr16 31905245 31906245 136634 ENSG00000214627 0.783641 141 5 0.76147 90 3 0.826517 85 5 0.845915 110 5 0.714976 61 4 0.857308 192 5 0.914244 69 4 0.910095 82 5 0.806222 76 5 0.791608 38 3 0.827814 210 5 0.702778 20 1 0.780519 61 6 0.898148 35 3 0.902174 48 3 1.000000 11 0 1.000000 3 0 0.703505 182 4 0.917587 159 5 0.784843 117 5 0.86047 45 3 1.000000 3 0 0.759041 105 6 0.835455 52 5 0.434524 30 2 0.832445 158 5 0.7993410 95 4 0.746284 54 5 0.914671 95 4 0.857826 132 5 0.727913 174 5 0.70578 115 5 0.7355716 154 6 0.619348 113 4 0.5846405 135 5 1.0000000 8 1 0.741259 105 5 0.752514 187 5 0.753383 162 5 0.799175 137 5 0.722881 151 5 0.957237 95 3 0.838060 131 5 0.859268 0.875521 0.831633 0.878395 0.811424 0.87550 0.916537 0.952220 0.805535 0.900119 0.851660 0.764151 0.858041 0.915094 0.907575 1.00000 NA 0.896339 0.916202 0.878681 0.852782 0.905811 0.839652 0.816552 0.774397 0.839280 0.809342 0.718786 0.862069 0.846387 0.880375 0.822623 0.8090519 0.6294722 0.8118017 NA 0.6797059 0.800930 0.941118 0.812642 0.780620 0.932473 0.868682 0 0.863611 0.840265 0.02746867 5 0.812203 0.799327 0.0128768 0.093207 9.4885e-01 insignificant 1 1.0000000 insignificant 0.071323 0.89962225 insignificant 1 1.0000 insignificant 0.04698954 0.3092484 lowCoverage 1.00000 lowCoverage 0.863611 0.732194 0.1122482 5 0.812203 0.626357 0.1858465 2.9548e-08 9.9932e-01 weaklyHypermeth 5.3724e-07 1.000000 weaklyHypermeth 8.0751e-04 0.99139908 weaklyHypermeth 1.1741e-02 1.00000 weaklyHypermeth 0.0975797 1.6985e-01 lowCoverage 1.0000e+00 lowCoverage 0.863611 0.875740 0.0019857 5 0.812203 0.767559 0.0446440 3.8384e-01 8.0657e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.3380e-01 7.3655e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.2321e-02 6.3978e-01 lowCoverage 1.0000e+00 lowCoverage 0.840265 0.732194 0.0995175 5 0.799327 0.626357 0.1729697 1.0668e-04 0.96829684 weaklyHypermeth 1.4037e-03 1.00000 weaklyHypermeth 1.7574e-02 0.93777547 weaklyHypermeth 1.6579e-01 1.00000 insignificant 0.0505901 4.9806e-01 lowCoverage 1.0000e+00 lowCoverage 0.840265 0.875740 -0.02567060 5 0.79933 0.767559 0.03176720 6.1785e-01 4.4360e-01 insignificant 1.0000e+00 1.000000 insignificant 8.9523e-01 0.30400661 insignificant 1.0000e+00 1.00000 insignificant -0.0246685 6.7462e-01 lowCoverage 1.00000000 lowCoverage 0.732194 0.875740 -0.0969290 5 0.626357 0.767559 -0.1412025 9.9902e-01 6.5722e-03 weaklyHypometh 1.0000e+00 8.6476e-02 weaklyHypometh 9.8915e-01 3.1980e-02 weaklyHypometh 1.00000000 0.38071395 insignificant -0.07525861 3.2613e-01 lowCoverage 1.0000000 lowCoverage chr16 31914123 31915123 136635 ENSG00000214627 0.853367 246 7 0.81478 427 6 0.802468 225 6 0.891643 306 7 0.877873 179 6 0.880954 645 7 0.754104 189 6 0.797284 289 6 0.848920 276 6 0.814004 230 6 0.750279 302 6 0.789815 57 6 0.791902 218 6 0.864881 168 6 0.920462 244 6 0.891667 86 6 0.599818 340 2 0.811950 384 5 0.906222 322 7 0.829606 254 6 0.56429 62 4 0.864229 81 4 0.889707 213 6 0.497260 141 5 0.831527 76 4 0.841214 656 6 0.6467409 148 6 0.658372 139 6 0.696102 281 6 0.849556 590 6 0.855824 551 6 0.82399 320 6 0.7166713 314 6 0.551950 133 6 0.4439781 460 7 0.9107143 46 1 0.621210 340 6 0.695481 445 7 0.750512 288 7 0.809654 249 7 0.801431 321 7 0.849365 316 7 0.802578 330 7 0.888995 0.815461 0.749459 0.905467 0.845498 0.87819 0.785883 0.835363 0.846035 0.858689 0.778980 0.809705 0.803923 0.868140 0.913414 0.89218 0.714294 0.793344 0.920995 0.810606 0.710499 0.795987 0.872912 0.727501 0.861459 0.865095 0.821830 0.871335 0.783967 0.870085 0.877072 0.841822 0.7192223 0.4569367 0.6681868 1.0000000 0.5464426 0.710028 0.775412 0.806519 0.822907 0.849297 0.785815 4 0.833302 0.850783 -0.00649595 6 0.855181 0.681977 0.1732036 0.443614 1.4087e-01 insignificant 1 1.0000000 insignificant 0.032232 0.67118699 inconclusive 1 1.0000 insignificant 0.07303242 0.0998231 insignificant 1.00000 insignificant 0.833117 0.637306 0.1783731 6 0.837078 0.641222 0.1958558 2.7662e-15 1.0000e+00 weaklyHypermeth 1.1065e-13 1.000000 weaklyHypermeth 2.9893e-04 0.99999686 weaklyHypermeth 5.3381e-03 1.00000 weaklyHypermeth 0.1679325 4.8871e-02 weaklyHypermeth 5.8179e-01 insignificant 0.832930 0.804521 0.0312111 6 0.813804 0.795109 0.0186945 7.7544e-02 8.6537e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.9512e-02 9.8406e-01 weaklyHypermeth 9.8779e-01 1.00000000 insignificant 2.1892e-02 3.4814e-01 insignificant 1.0000e+00 insignificant 0.851306 0.636939 0.1870726 6 0.681977 0.569975 0.1120016 4.9204e-12 0.99895616 weaklyHypermeth 1.7573e-10 1.00000 weaklyHypermeth 3.1308e-03 0.99631732 weaklyHypermeth 4.1195e-02 1.00000 weaklyHypermeth 0.0949000 2.4217e-01 insignificant 1.0000e+00 insignificant 0.852046 0.804521 0.04452977 6 0.82921 0.795109 0.03409945 3.1180e-04 9.2616e-01 weaklyHypermeth 1.2472e-02 1.000000 weaklyHypermeth 1.4726e-02 0.89593614 weaklyHypermeth 4.6017e-01 1.00000 insignificant -0.0511407 2.3800e-01 insignificant 1.00000000 insignificant 0.637097 0.804521 -0.1686577 7 0.589968 0.795109 -0.2051407 9.9715e-01 7.6394e-07 weaklyHypometh 1.0000e+00 3.6252e-05 weaklyHypometh 9.1590e-01 8.2242e-03 weaklyHypometh 1.00000000 0.13264849 insignificant -0.14604077 7.5400e-02 insignificant 0.8239822 insignificant chr16 32076076 32077076 136643 ENSG00000214627 0.804737 81 5 0.83889 61 5 0.533333 22 3 0.831818 93 5 0.450000 14 0 0.707522 156 5 0.333333 12 0 0.766667 18 2 0.750000 11 0 NA 0 0 0.720752 74 5 NA 0 0 0.666667 12 0 0.666667 11 0 0.666667 6 0 0.666667 3 0 NA 0 0 0.777887 157 5 0.815385 43 3 0.767857 60 5 0.93333 12 2 0.800000 8 0 0.900000 8 0 0.740000 18 2 0.783477 188 5 0.865432 98 5 0.8666667 19 2 1.000000 2 0 0.706190 48 5 0.812281 91 5 0.873333 84 5 0.75088 99 5 0.4717949 34 2 0.577124 87 5 0.1187097 101 4 0.5754386 70 5 0.517045 50 5 0.778440 167 5 0.695789 66 3 0.674286 125 5 0.744795 106 4 0.846154 41 3 0.787908 76 5 0.674561 0.750000 0.555556 0.750000 0.750000 0.70862 0.333333 0.666667 0.666667 NA 0.713158 NA 0.666667 0.777778 0.666667 0.66667 NA 0.685367 0.692308 0.708333 0.868852 0.666667 0.833333 0.733333 0.742576 0.755556 0.777778 0.894877 0.605556 0.724172 0.836508 0.725546 0.3333333 0.5108932 0.1311828 0.6257310 0.5757576 0.713845 0.604094 0.657143 0.630213 0.743590 0.674292 0 0.726619 0.801187 -0.04441437 3 0.761994 0.804741 -0.0427464 0.967976 1.2541e-01 lowCoverage 1 1.0000000 lowCoverage 0.940649 0.10595261 lowCoverage 1 1.0000 lowCoverage -0.14391657 0.0019127 lowCoverage 0.95633 lowCoverage 0.726619 0.557087 0.1894667 3 0.761994 0.577074 0.1849197 4.9352e-05 9.9982e-01 lowCoverage 5.4233e-04 1.000000 lowCoverage 7.8698e-04 0.99896256 lowCoverage 1.1741e-02 1.00000 lowCoverage 0.1856244 9.4081e-02 lowCoverage 9.8756e-01 lowCoverage 0.726619 0.683575 0.0338386 3 0.761994 0.734521 0.0274728 2.4819e-01 8.4254e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.3319e-01 5.8662e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -5.7737e-02 2.2811e-01 lowCoverage 1.0000e+00 lowCoverage 0.801481 0.555992 0.2313963 5 0.837284 0.480895 0.3563884 2.9045e-06 0.99999953 hypermethylated 4.9228e-05 1.00000 hypermethylated 4.0519e-07 0.99999802 hypermethylated 2.2510e-05 1.00000 hypermethylated 0.3295409 1.2297e-02 lowCoverage 2.1446e-01 lowCoverage 0.801187 0.683575 0.07637304 5 0.80474 0.734521 0.07021917 3.2286e-03 9.7747e-01 weaklyHypermeth 9.6440e-02 1.000000 weaklyHypermeth 3.6791e-02 0.92260937 weaklyHypermeth 9.6818e-01 1.00000 insignificant 0.0861799 5.7662e-02 lowCoverage 1.00000000 lowCoverage 0.557087 0.683575 -0.1572705 5 0.577074 0.734521 -0.1574469 9.9937e-01 1.8443e-02 weaklyHypometh 1.0000e+00 2.1698e-01 insignificant 9.9912e-01 6.7611e-03 weaklyHypometh 1.00000000 0.12203146 insignificant -0.24336101 3.9939e-02 lowCoverage 0.5574487 lowCoverage chr16 32100198 32101198 136657 ENSG00000214627 0.810758 222 8 0.74879 243 8 0.634889 86 7 0.862862 229 8 0.739025 92 7 0.790311 545 8 0.676276 164 7 0.825184 137 7 0.676620 118 7 0.691964 41 4 0.828011 398 8 0.739583 25 1 0.749003 118 7 0.770085 52 7 0.747796 68 7 0.574675 34 2 0.925139 103 2 0.770874 297 8 0.906618 233 7 0.734736 289 8 0.84418 66 7 0.614313 46 5 0.835339 177 8 0.719748 116 7 0.787500 50 4 0.813135 547 8 0.6927012 81 5 0.855782 39 6 0.683012 182 7 0.760850 325 8 0.810919 369 7 0.81184 413 8 0.5595276 217 8 0.506825 160 8 0.6785642 446 8 0.5000000 10 0 0.577128 318 7 0.709282 461 8 0.744375 339 8 0.729461 238 8 0.744491 171 8 0.887472 147 7 0.840255 201 8 0.796780 0.669160 0.574984 0.821569 0.677091 0.75522 0.599933 0.755046 0.735452 0.724286 0.775713 0.780476 0.629488 0.730237 0.688046 0.47411 0.876651 0.717234 0.895227 0.664944 0.865476 0.479876 0.823624 0.712711 0.836476 0.725786 0.681840 0.870150 0.597240 0.695094 0.708037 0.791076 0.4997232 0.4260616 0.6322825 0.4009228 0.4975513 0.685506 0.665359 0.668822 0.677216 0.840042 0.751811 3 0.727533 0.728328 0.02596358 8 0.790016 0.779420 0.0105967 0.442934 3.7113e-01 insignificant 1 1.0000000 insignificant 0.509742 0.72132247 insignificant 1 1.0000 insignificant -0.00894999 0.7617026 insignificant 1.00000 insignificant 0.727533 0.558313 0.1781159 8 0.790016 0.633273 0.1567436 1.5615e-12 9.9997e-01 weaklyHypermeth 4.7320e-11 1.000000 weaklyHypermeth 2.0416e-07 0.99999412 weaklyHypermeth 9.8455e-06 1.00000 weaklyHypermeth 0.1716054 2.7329e-03 weaklyHypermeth 5.9412e-02 weaklyHypermeth 0.727533 0.665146 0.0442308 8 0.790016 0.774220 0.0157968 4.5988e-01 7.6562e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3051e-01 4.6057e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.9051e-02 4.5651e-01 insignificant 1.0000e+00 insignificant 0.728328 0.558313 0.1518805 8 0.779420 0.633273 0.1461469 1.9534e-10 0.99999056 weaklyHypermeth 6.1043e-09 1.00000 weaklyHypermeth 9.0736e-07 0.99999962 weaklyHypermeth 4.5368e-05 1.00000 weaklyHypermeth 0.1805554 2.0011e-03 weaklyHypermeth 4.7645e-02 weaklyHypermeth 0.728328 0.665146 0.01820738 8 0.77942 0.774220 0.00520014 3.1986e-01 6.9466e-01 insignificant 1.0000e+00 1.000000 insignificant 9.1864e-01 0.24852374 insignificant 1.0000e+00 1.00000 insignificant -0.0201008 6.1414e-01 insignificant 1.00000000 insignificant 0.558313 0.665146 -0.1361589 8 0.633273 0.774220 -0.1409468 9.9996e-01 7.1335e-07 weaklyHypometh 1.0000e+00 3.5668e-05 weaklyHypometh 9.9999e-01 1.8677e-05 weaklyHypometh 1.00000000 0.00169794 weaklyHypometh -0.20065623 2.2512e-03 weaklyHypometh 0.0900482 weaklyHypometh chr16 32665872 32666872 136670 TP53TG3 ENSG00000183632 0.839610 207 8 0.78124 265 8 0.492909 118 7 0.835846 262 8 0.729377 115 7 0.831156 511 8 0.690476 115 7 0.813702 179 8 0.847581 80 7 0.831597 48 7 0.817708 343 8 0.801587 25 2 0.641295 84 8 0.769841 68 7 0.854813 105 7 0.489583 24 1 0.926410 129 2 0.754785 225 8 0.881463 224 8 0.790736 245 8 0.89223 68 6 0.696005 67 8 0.842768 164 7 0.760842 91 6 0.851912 57 6 0.814085 507 8 0.7573635 81 4 0.667842 63 7 0.716279 208 8 0.812357 331 8 0.713192 363 8 0.86860 367 8 0.4869793 215 7 0.578900 156 8 0.6029173 464 8 0.6000000 10 0 0.591464 302 7 0.647205 439 8 0.730694 400 8 0.778023 284 8 0.720499 193 8 0.813585 176 8 0.793405 230 8 0.783294 0.679161 0.462125 0.808506 0.640495 0.80551 0.605460 0.735297 0.750682 0.739602 0.762524 0.745850 0.527858 0.726595 0.786585 0.38787 0.863590 0.681172 0.876927 0.720344 0.874083 0.610965 0.792977 0.755754 0.763166 0.736787 0.643039 0.649626 0.652984 0.720815 0.585095 0.826647 0.4660064 0.4425274 0.5461143 0.4109879 0.4498259 0.614279 0.627969 0.682434 0.636991 0.782813 0.705735 3 0.747924 0.726236 0.02967560 8 0.801325 0.792464 0.0088604 0.566652 6.5135e-01 insignificant 1 1.0000000 insignificant 0.698566 0.33585158 insignificant 1 1.0000 insignificant -0.01170315 0.7295997 insignificant 1.00000 insignificant 0.747924 0.525851 0.2398486 8 0.801325 0.588832 0.2124924 8.0186e-15 1.0000e+00 hypermethylated 3.0841e-13 1.000000 hypermethylated 1.2713e-08 1.00000000 hypermethylated 9.0804e-07 1.00000 hypermethylated 0.1865084 2.3932e-05 weaklyHypermeth 1.4957e-03 weaklyHypermeth 0.747924 0.659392 0.0702062 8 0.801325 0.762028 0.0392967 1.5394e-01 8.2955e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.7370e-01 8.9583e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.8447e-03 9.0391e-01 insignificant 1.0000e+00 insignificant 0.726236 0.525851 0.2063752 8 0.792464 0.588832 0.2036320 5.9028e-13 1.00000000 hypermethylated 2.3611e-11 1.00000 hypermethylated 1.4340e-07 1.00000000 hypermethylated 8.9626e-06 1.00000 hypermethylated 0.1982115 1.5923e-05 weaklyHypermeth 9.9517e-04 weaklyHypermeth 0.726236 0.659392 0.04176829 8 0.79246 0.762028 0.03043630 1.2458e-01 9.4917e-01 insignificant 1.0000e+00 1.000000 insignificant 2.5518e-01 0.94980872 insignificant 1.0000e+00 1.00000 insignificant 0.0155479 5.8762e-01 insignificant 1.00000000 insignificant 0.525851 0.659392 -0.1659540 8 0.588832 0.762028 -0.1731957 1.0000e+00 7.9755e-07 weaklyHypometh 1.0000e+00 3.6252e-05 weaklyHypometh 1.0000e+00 1.7485e-05 weaklyHypometh 1.00000000 0.00169794 weaklyHypometh -0.18266366 1.1630e-04 weaklyHypometh 0.0193836 weaklyHypometh chr16 32786883 32787883 136688 IGHV2OR16-5 ENSG00000214618 0.829756 166 5 0.84117 281 5 0.533002 172 4 0.790126 163 5 0.635580 138 3 0.835983 645 5 0.660467 182 4 0.789770 194 5 0.644913 175 5 0.799488 134 4 0.602132 350 5 0.825455 31 3 0.666998 103 4 0.774524 68 5 0.796976 82 3 0.185185 26 2 0.000000 3 0 0.821918 234 5 0.939028 359 5 0.772561 323 5 0.90444 162 5 0.678704 66 3 0.856718 185 5 0.663354 172 4 0.842098 113 5 0.862551 672 5 0.6460907 162 5 0.605268 93 3 0.752923 302 5 0.690171 520 5 0.799535 516 5 0.73851 437 5 0.5526315 292 5 0.480006 285 5 0.5273989 816 5 0.3333333 10 1 0.306271 369 5 0.635967 530 5 0.804862 263 5 0.743115 291 5 0.503205 162 5 0.709212 170 5 0.846248 205 5 0.808039 0.722176 0.565960 0.827958 0.644912 0.78003 0.616697 0.721396 0.578199 0.653794 0.766052 0.828939 0.459262 0.704454 0.690696 0.38015 0.547634 0.673808 0.905517 0.576000 0.842936 0.709574 0.801507 0.692003 0.713960 0.654794 0.416616 0.744845 0.605742 0.641705 0.632926 0.790016 0.4318094 0.2076609 0.3977195 0.1645308 0.3108386 0.411881 0.612413 0.648513 0.520055 0.593002 0.663856 3 0.736732 0.726310 0.01357504 5 0.693006 0.713870 -0.0208635 0.766086 1.5543e-01 insignificant 1 1.0000000 insignificant 0.783599 0.09281727 insignificant 1 1.0000 insignificant -0.06611144 0.2671737 lowCoverage 1.00000 lowCoverage 0.736925 0.439809 0.3244370 5 0.693006 0.420063 0.2729434 5.1119e-10 1.0000e+00 hypermethylated 1.1113e-08 1.000000 hypermethylated 7.4888e-06 1.00000000 hypermethylated 2.2026e-04 1.00000 hypermethylated 0.2146506 1.0250e-02 lowCoverage 1.8304e-01 lowCoverage 0.736925 0.676444 0.0862157 5 0.693006 0.661292 0.0317138 4.6193e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant 4.6910e-01 9.9917e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.4077e-02 6.7220e-01 lowCoverage 1.0000e+00 lowCoverage 0.726120 0.440000 0.3068944 5 0.700596 0.466736 0.2338595 1.3157e-11 0.99688203 hypermethylated 4.5368e-10 1.00000 hypermethylated 1.0061e-06 0.99953153 hypermethylated 4.7908e-05 1.00000 hypermethylated 0.2807620 1.5440e-03 lowCoverage 4.0672e-02 lowCoverage 0.726120 0.677064 0.06816413 5 0.70060 0.734769 -0.03417346 7.8896e-02 8.7772e-01 insignificant 1.0000e+00 1.000000 insignificant 1.2534e-01 0.91219934 insignificant 1.0000e+00 1.00000 insignificant 0.0320348 6.4453e-01 lowCoverage 1.00000000 lowCoverage 0.439809 0.676444 -0.2163219 5 0.420063 0.661292 -0.2412297 9.9996e-01 9.9744e-04 hypomethylated 1.0000e+00 1.6624e-02 hypomethylated 1.0000e+00 1.2868e-03 weaklyHypometh 1.00000000 0.04423003 weaklyHypometh -0.24872725 1.2926e-02 lowCoverage 0.2750217 lowCoverage chr16 32865178 32866178 136700 ENSG00000214614 0.838065 489 6 0.80673 208 7 0.730317 341 7 0.911483 547 6 0.843827 232 7 0.847124 932 7 0.817123 364 7 0.880560 279 6 0.827321 382 6 0.867190 271 6 0.866149 436 7 0.825976 146 6 0.608741 176 6 0.974760 73 3 0.855918 236 6 0.815449 159 6 0.767870 176 4 0.830855 825 6 0.872336 355 7 0.774178 339 6 0.85501 103 6 0.747727 194 5 0.899256 358 7 0.868757 173 7 0.914478 293 6 0.866705 736 7 0.6950749 215 6 0.935934 125 6 0.787069 272 6 0.841667 598 7 0.806378 465 7 0.84702 467 6 0.4679802 283 6 0.532739 400 6 0.5766785 567 7 0.5391294 129 5 0.601577 398 7 0.746408 610 7 0.754232 666 6 0.746384 475 6 0.702539 635 6 0.813418 750 6 0.781273 696 6 0.807792 0.757995 0.715131 0.888957 0.801731 0.81893 0.768822 0.857006 0.782628 0.853243 0.860022 0.782985 0.698144 0.836960 0.819666 0.77996 0.806476 0.794960 0.852561 0.774303 0.831021 0.682327 0.871855 0.883068 0.918580 0.849004 0.690034 0.914973 0.746359 0.818587 0.767708 0.813286 0.4358559 0.4757067 0.5849752 0.4865076 0.6091022 0.694047 0.700793 0.727880 0.707511 0.814552 0.748822 6 0.794861 0.806202 -0.01235232 7 0.832263 0.839897 -0.0076340 0.677887 5.0951e-01 insignificant 1 1.0000000 insignificant 0.569500 0.40464320 insignificant 1 1.0000 insignificant -0.01065798 0.6853158 insignificant 1.00000 insignificant 0.794861 0.574361 0.2395066 7 0.832263 0.593661 0.2386015 1.5981e-25 1.0000e+00 hypermethylated 1.7491e-23 1.000000 hypermethylated 3.3068e-16 1.00000000 hypermethylated 1.6534e-13 1.00000 hypermethylated 0.2506801 5.7604e-04 hypermethylated 1.7456e-02 hypermethylated 0.794861 0.700497 0.0743416 6 0.832263 0.781689 0.0505737 2.5460e-04 9.9158e-01 weaklyHypermeth 9.7924e-03 1.0000000 weaklyHypermeth 4.9387e-04 9.9623e-01 weaklyHypermeth 2.4694e-02 1.00000000 weaklyHypermeth 6.8529e-02 1.7712e-02 weaklyHypermeth 6.1076e-01 insignificant 0.806202 0.574361 0.2549747 7 0.839897 0.593661 0.2462355 1.2643e-17 1.00000000 hypermethylated 9.7256e-16 1.00000 hypermethylated 1.6642e-11 1.00000000 hypermethylated 3.3285e-09 1.00000 hypermethylated 0.2613381 3.4743e-04 hypermethylated 1.2408e-02 hypermethylated 0.806202 0.700497 0.08735851 6 0.83990 0.781689 0.05820766 2.0697e-03 9.4296e-01 weaklyHypermeth 6.6763e-02 1.000000 weaklyHypermeth 1.0317e-02 0.96299798 weaklyHypermeth 3.5577e-01 1.00000 insignificant 0.0791873 1.2755e-02 weaklyHypermeth 0.49058254 insignificant 0.574361 0.700497 -0.1665530 6 0.593661 0.781689 -0.1880278 1.0000e+00 5.5877e-07 weaklyHypometh 1.0000e+00 3.1043e-05 weaklyHypometh 1.0000e+00 3.6880e-06 weaklyHypometh 1.00000000 0.00052686 weaklyHypometh -0.18215074 3.6305e-03 weaklyHypometh 0.1210172 insignificant chr16 33041178 33042178 136722 ENSG00000214613 0.805052 204 7 0.69108 247 7 0.580503 94 6 0.861929 202 7 0.699261 83 6 0.767879 477 7 0.701470 133 6 0.701351 137 6 0.767194 64 4 0.751526 39 3 0.810753 291 7 0.916667 16 1 0.775046 99 6 0.745238 48 6 0.670190 93 6 0.675000 21 2 0.883205 141 2 0.700269 221 7 0.838943 253 6 0.699422 288 7 0.80891 73 6 0.701814 47 5 0.748902 122 6 0.778938 70 6 0.892857 47 6 0.763617 494 7 0.6859814 103 6 0.747222 61 6 0.779346 171 6 0.742916 325 7 0.735228 292 7 0.81478 358 7 0.4841561 161 6 0.485897 132 7 0.5660410 383 6 0.6800000 15 1 0.560221 231 6 0.680841 373 7 0.732349 344 7 0.799737 225 7 0.751948 144 7 0.787567 125 7 0.804090 194 7 0.733758 0.534714 0.472008 0.791647 0.607441 0.71780 0.526282 0.748756 0.669602 0.664014 0.769380 0.913793 0.728504 0.675205 0.550243 0.59713 0.833980 0.587279 0.802871 0.560485 0.840912 0.570658 0.776777 0.740060 0.860920 0.667454 0.526624 0.796648 0.629216 0.645034 0.590764 0.782481 0.3612468 0.3561561 0.4814190 0.3963292 0.4251782 0.575249 0.621478 0.680603 0.657417 0.716066 0.724917 3 0.710568 0.707813 0.01929460 7 0.775357 0.757341 0.0180160 0.410610 9.3763e-01 insignificant 1 1.0000000 insignificant 0.601270 0.70479018 insignificant 1 1.0000 insignificant -0.01461062 0.5538925 insignificant 1.00000 insignificant 0.710568 0.498069 0.2310929 6 0.775357 0.569908 0.2054484 8.1962e-13 1.0000e+00 hypermethylated 2.6439e-11 1.000000 hypermethylated 1.7257e-06 0.99999984 hypermethylated 6.3915e-05 1.00000 hypermethylated 0.1759064 2.5367e-03 weaklyHypermeth 5.6371e-02 weaklyHypermeth 0.710568 0.661822 0.0361679 7 0.775357 0.772041 0.0033153 3.5290e-01 2.7502e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.6541e-01 5.1821e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.3039e-02 3.3503e-01 insignificant 1.0000e+00 insignificant 0.707813 0.498069 0.2053479 6 0.757341 0.569908 0.1874325 2.8747e-10 1.00000000 hypermethylated 8.4550e-09 1.00000 hypermethylated 1.0708e-06 0.99999991 hypermethylated 4.8672e-05 1.00000 hypermethylated 0.1905171 1.8366e-03 weaklyHypermeth 4.4796e-02 weaklyHypermeth 0.707813 0.661822 0.01662641 7 0.75734 0.772041 -0.01470067 6.1603e-01 9.9104e-02 insignificant 1.0000e+00 1.000000 insignificant 6.2434e-01 0.19558708 insignificant 1.0000e+00 1.00000 insignificant -0.0084284 6.9778e-01 insignificant 1.00000000 insignificant 0.498069 0.661822 -0.1878306 6 0.569908 0.772041 -0.2021331 1.0000e+00 1.6129e-09 weaklyHypometh 1.0000e+00 2.3041e-07 weaklyHypometh 1.0000e+00 1.2070e-05 weaklyHypometh 1.00000000 0.00150872 weaklyHypometh -0.19894550 1.6782e-03 weaklyHypometh 0.0847162 weaklyHypometh chr16 33302987 33303987 136730 ENSG00000205456 0.831991 272 7 0.86548 218 7 0.614440 113 7 0.881681 322 7 0.813718 135 7 0.826327 600 6 0.805708 146 7 0.895114 162 7 0.827854 236 8 0.838479 202 8 0.871022 269 7 0.708333 24 1 0.821869 56 3 0.670772 36 3 0.799038 162 8 0.677778 32 2 0.833333 7 0 0.835224 268 7 0.903418 241 6 0.772136 272 6 0.93906 66 6 0.981481 40 4 0.789116 99 6 0.766778 116 6 0.854590 515 7 0.890182 394 7 0.8897661 71 7 0.833333 37 6 0.928545 172 7 0.899131 421 6 0.744300 464 7 0.88388 258 7 0.7517574 234 7 0.651887 242 7 0.8416398 615 7 0.8179499 276 5 0.639961 303 8 0.871203 436 7 0.795913 240 7 0.807734 161 7 0.833790 301 7 0.878751 322 6 0.841514 298 7 0.849681 0.863709 0.671539 0.885383 0.828794 0.87622 0.825312 0.933339 0.873412 0.815301 0.884272 0.615801 0.910408 0.736370 0.828265 0.77301 0.914648 0.848254 0.914557 0.819913 0.919228 0.983364 0.847939 0.746811 0.860355 0.885746 0.878423 0.880313 0.919049 0.891631 0.847160 0.897047 0.7384836 0.5811669 0.8237987 0.8655430 0.6867302 0.833950 0.812507 0.881724 0.791144 0.895298 0.836256 1 0.875465 0.883528 -0.00517670 7 0.838322 0.855211 -0.0168898 0.541662 1.5122e-01 insignificant 1 1.0000000 insignificant 0.886535 0.01353773 weaklyHypometh 1 1.0000 insignificant -0.06199436 0.0315329 weaklyHypometh 1.00000 insignificant 0.875465 0.806268 0.0864277 7 0.838322 0.753133 0.0851887 1.8782e-05 9.9939e-01 weaklyHypermeth 2.2096e-04 1.000000 weaklyHypermeth 1.2571e-02 0.98674978 weaklyHypermeth 1.1972e-01 1.00000 insignificant 0.0422860 3.6734e-01 insignificant 1.0000e+00 insignificant 0.875099 0.855522 0.0168602 7 0.791507 0.809273 -0.0177662 1.3441e-01 9.8454e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.6076e-01 9.7694e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.6855e-02 2.5436e-01 insignificant 1.0000e+00 insignificant 0.883528 0.806268 0.0826468 7 0.855211 0.753133 0.1020785 4.4961e-05 0.99813967 weaklyHypermeth 6.2446e-04 1.00000 weaklyHypermeth 1.1701e-03 0.99957328 weaklyHypermeth 1.7728e-02 1.00000 weaklyHypermeth 0.1042804 5.1085e-02 insignificant 6.2299e-01 insignificant 0.883528 0.855193 0.01829021 7 0.85521 0.737750 0.11746133 3.0458e-02 8.0752e-01 weaklyHypermeth 6.4372e-01 1.000000 insignificant 3.4872e-03 0.97634598 weaklyHypermeth 1.3949e-01 1.00000 insignificant 0.0351396 1.8534e-01 insignificant 1.00000000 insignificant 0.806268 0.855193 -0.0714062 7 0.753133 0.737750 0.0153828 9.6940e-01 7.7663e-02 insignificant 1.0000e+00 7.0603e-01 insignificant 9.7253e-01 1.7675e-01 insignificant 1.00000000 1.00000000 insignificant -0.06914082 1.5485e-01 insignificant 1.0000000 insignificant chr16 33616591 33617591 136751 ENSG00000205454 0.771784 464 6 0.76883 275 9 0.718801 427 9 0.898937 506 8 0.875725 282 9 0.848678 955 9 0.731646 418 9 0.867463 346 9 0.855031 426 8 0.845964 437 9 0.866266 417 9 0.851813 207 8 0.683268 227 8 0.916506 102 6 0.842978 338 8 0.837243 192 8 0.683892 177 4 0.704609 886 9 0.888955 370 6 0.789803 417 8 0.82019 105 6 0.766415 234 8 0.880893 293 7 0.836945 229 9 0.786498 338 8 0.874337 784 9 0.7801948 246 7 0.823136 163 9 0.781942 291 7 0.855214 711 9 0.761785 582 9 0.88623 643 9 0.6394963 367 9 0.437712 420 8 0.6993322 637 9 0.6205809 123 4 0.662194 535 9 0.796762 619 9 0.764196 589 9 0.813576 608 8 0.817296 696 6 0.848321 827 8 0.787740 653 8 0.779129 0.778382 0.675808 0.860767 0.852128 0.83255 0.788855 0.812095 0.836393 0.838770 0.844082 0.787697 0.658822 0.811861 0.775981 0.80491 0.738711 0.752747 0.861975 0.755313 0.834026 0.700915 0.865750 0.872792 0.825207 0.834417 0.700888 0.817353 0.682040 0.844259 0.794251 0.857338 0.4982186 0.4274072 0.5990883 0.5233579 0.6593554 0.729520 0.723909 0.747054 0.729003 0.827770 0.750527 6 0.783581 0.801171 -0.02054616 8 0.814583 0.809466 0.0051165 0.778655 2.8792e-01 insignificant 1 1.0000000 insignificant 0.690945 0.48569406 insignificant 1 1.0000 insignificant -0.00873878 0.6840149 insignificant 1.00000 insignificant 0.783526 0.611996 0.1969616 8 0.796041 0.659327 0.1367136 6.7490e-18 9.9998e-01 weaklyHypermeth 3.9700e-16 1.000000 weaklyHypermeth 6.9888e-10 0.99996220 weaklyHypermeth 5.8240e-08 1.00000 weaklyHypermeth 0.1697302 1.5004e-02 weaklyHypermeth 2.5430e-01 insignificant 0.784284 0.714201 0.0400836 8 0.820998 0.797745 0.0232529 1.6228e-01 5.8127e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.1922e-01 5.4988e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.1841e-03 7.8152e-01 insignificant 1.0000e+00 insignificant 0.801041 0.611996 0.2192439 9 0.790413 0.659327 0.1310855 3.9020e-15 0.99987107 hypermethylated 1.9510e-13 1.00000 hypermethylated 7.3033e-10 0.99738631 hypermethylated 8.1148e-08 1.00000 hypermethylated 0.1784690 1.2653e-02 weaklyHypermeth 2.1446e-01 insignificant 0.801651 0.714201 0.06218864 8 0.84120 0.797745 0.04345445 3.2790e-03 4.8683e-01 weaklyHypermeth 9.6440e-02 1.000000 weaklyHypermeth 1.1800e-01 0.44690586 insignificant 1.0000e+00 1.00000 insignificant 0.0149229 4.5846e-01 insignificant 1.00000000 insignificant 0.611935 0.714201 -0.1678802 8 0.658512 0.797745 -0.1392331 9.9999e-01 1.2997e-06 weaklyHypometh 1.0000e+00 4.9142e-05 weaklyHypometh 1.0000e+00 1.5139e-06 weaklyHypometh 1.00000000 0.00046632 weaklyHypometh -0.16354614 1.8072e-02 weaklyHypometh 0.3543565 insignificant chr16 33632834 33633834 136754 ENSG00000205454 0.923993 61 5 0.85415 89 5 0.676561 102 5 0.971429 31 5 0.809047 79 5 0.725301 230 5 0.830455 81 5 0.855556 65 5 0.831373 74 5 0.866342 73 5 0.854662 136 5 0.814510 63 4 0.740501 59 5 0.708333 18 2 0.899048 86 5 0.922500 39 4 0.722222 47 4 0.769412 38 4 0.910622 82 5 0.768663 182 5 0.86586 53 5 0.800000 44 3 0.892319 60 5 0.797725 63 5 0.861111 25 3 0.850303 126 5 0.7538481 91 5 0.913095 62 5 0.784188 64 5 0.671944 102 5 0.742397 108 5 0.86583 204 5 0.4838664 105 5 0.627146 102 5 0.9500000 57 2 0.6951389 26 3 0.775060 92 5 0.693416 99 5 0.745623 78 5 0.768974 75 5 0.726869 37 4 0.846667 45 5 0.766667 55 5 0.926262 0.854072 0.679383 0.966951 0.811354 0.72438 0.829410 0.851575 0.833172 0.859982 0.850169 0.807609 0.726392 0.781474 0.895842 0.92528 0.699834 0.763126 0.908202 0.759810 0.863576 0.796020 0.894526 0.802374 0.831915 0.851901 0.747575 0.910403 0.782338 0.666408 0.738707 0.870945 0.4734028 0.6216919 0.8769960 0.6883918 0.7642943 0.683364 0.746287 0.764389 0.723828 0.841294 0.767413 4 0.830581 0.802395 0.02146557 5 0.816322 0.797841 0.0184810 0.080046 8.6933e-01 insignificant 1 1.0000000 insignificant 0.080906 0.77787948 insignificant 1 1.0000 insignificant 0.00618270 0.8235529 lowCoverage 1.00000 lowCoverage 0.830581 0.648649 0.1701079 5 0.816322 0.650821 0.1655017 5.5172e-08 9.9994e-01 weaklyHypermeth 9.6794e-07 1.000000 weaklyHypermeth 2.9099e-04 0.99768760 weaklyHypermeth 5.2908e-03 1.00000 weaklyHypermeth 0.1186295 1.2298e-01 lowCoverage 1.0000e+00 lowCoverage 0.830581 0.765517 0.0432221 5 0.816322 0.774476 0.0418463 2.4966e-02 3.8008e-01 weaklyHypermeth 5.9444e-01 1.0000000 insignificant 1.8280e-02 6.3257e-01 weaklyHypermeth 5.2554e-01 1.00000000 insignificant 5.1774e-02 8.4789e-02 lowCoverage 1.0000e+00 lowCoverage 0.802395 0.648649 0.1588195 5 0.797841 0.650821 0.1470207 2.0596e-05 0.99615283 weaklyHypermeth 3.0740e-04 1.00000 weaklyHypermeth 8.5588e-03 0.97826501 weaklyHypermeth 9.0093e-02 1.00000 weaklyHypermeth 0.1124468 1.4122e-01 lowCoverage 1.0000e+00 lowCoverage 0.802395 0.765517 0.02806276 5 0.79784 0.774476 0.02336532 6.7543e-02 1.1978e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3997e-02 0.10990395 weaklyHypermeth 6.4857e-01 1.00000 insignificant 0.0455914 1.4099e-01 lowCoverage 1.00000000 lowCoverage 0.648649 0.765517 -0.1493710 5 0.650821 0.774476 -0.1236554 9.7572e-01 1.4245e-04 weaklyHypometh 1.0000e+00 3.2374e-03 weaklyHypometh 8.4013e-01 1.5546e-02 weaklyHypometh 1.00000000 0.21295834 insignificant -0.06685536 3.5339e-01 lowCoverage 1.0000000 lowCoverage chr16 34193234 34194234 136791 CCNYL3 ENSG00000216671 0.717268 100 5 0.73850 97 5 0.549091 51 5 0.686765 83 5 0.606494 47 5 0.729606 187 5 0.695238 26 3 0.776078 65 5 0.634286 30 5 0.666667 24 2 0.736746 155 5 0.686667 22 3 0.683333 46 5 0.751323 41 5 0.856782 63 5 0.733333 11 0 0.460000 15 1 0.788095 83 5 0.810895 66 5 0.662588 127 5 0.67143 21 2 0.595238 13 2 0.706667 60 5 0.718333 31 4 0.656250 18 2 0.733747 95 5 0.4848485 31 2 0.780556 21 2 0.607468 77 5 0.756566 103 5 0.853480 68 5 0.76689 163 5 0.6624345 91 5 0.492312 73 5 0.5718434 100 5 0.7500000 4 0 0.440659 45 5 0.651487 100 5 0.726074 79 5 0.712698 99 5 0.769920 73 5 0.746032 39 5 0.633333 78 5 0.732200 0.760917 0.571165 0.681181 0.629261 0.70361 0.665179 0.771170 0.678125 0.625000 0.773670 0.608854 0.649740 0.664931 0.817675 0.76562 0.312500 0.828497 0.794815 0.710569 0.565625 0.613560 0.693750 0.755859 0.673473 0.746603 0.496686 0.670999 0.637251 0.756155 0.827610 0.762560 0.6023018 0.5388309 0.5567097 0.8039356 0.4100275 0.674197 0.770542 0.719643 0.781187 0.746776 0.638889 0 0.717700 0.726106 -0.00683804 5 0.770108 0.800682 -0.0305737 0.844643 4.5794e-01 insignificant 1 1.0000000 insignificant 0.820850 0.79006180 insignificant 1 1.0000 insignificant 0.00419828 0.9054707 lowCoverage 1.00000 lowCoverage 0.717489 0.585956 0.1347944 5 0.731793 0.646486 0.0853069 4.1632e-05 9.9875e-01 weaklyHypermeth 4.6258e-04 1.000000 weaklyHypermeth 3.5359e-03 0.99908082 weaklyHypermeth 4.0642e-02 1.00000 weaklyHypermeth 0.1036982 8.3205e-02 lowCoverage 9.1073e-01 lowCoverage 0.716967 0.720109 -0.0065742 5 0.711485 0.717516 -0.0060310 7.0705e-01 3.1105e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.2357e-01 3.6077e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.9124e-02 5.4638e-01 lowCoverage 1.0000e+00 lowCoverage 0.724928 0.585956 0.1416341 5 0.767462 0.646486 0.1209762 1.6287e-04 0.99999997 weaklyHypermeth 2.0359e-03 1.00000 weaklyHypermeth 2.3821e-02 0.99993508 weaklyHypermeth 2.2056e-01 1.00000 insignificant 0.0994999 1.0519e-01 lowCoverage 1.0000e+00 lowCoverage 0.723741 0.720109 -0.00046663 5 0.72095 0.717516 0.00343886 5.0621e-01 4.4606e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1599e-01 0.31976678 insignificant 1.0000e+00 1.00000 insignificant -0.0233221 5.3610e-01 lowCoverage 1.00000000 lowCoverage 0.584951 0.720109 -0.1424538 5 0.575783 0.717516 -0.1417326 9.9999e-01 7.6166e-04 weaklyHypometh 1.0000e+00 1.2910e-02 weaklyHypometh 9.9998e-01 4.4410e-03 weaklyHypometh 1.00000000 0.08857321 weaklyHypometh -0.12282200 5.1068e-02 lowCoverage 0.6531087 lowCoverage chr16 46372686 46373686 136820 ENSG00000210177,ENSG00000222268 0.788889 47 5 0.88309 258 5 0.631753 181 5 1.000000 2 0 0.878917 132 5 0.970000 66 5 0.899740 235 5 0.931941 126 5 0.768211 136 5 0.938377 162 5 0.870977 131 5 0.913364 125 5 0.891953 156 5 NA 0 0 0.932170 146 5 0.940000 95 5 0.968452 94 5 1.000000 2 0 0.969244 150 5 0.916667 60 5 0.91000 21 2 1.000000 9 0 0.893137 87 5 1.000000 58 3 1.000000 2 0 0.932727 182 5 0.8600000 33 3 0.915000 35 4 0.918557 169 5 0.924963 250 5 0.897303 224 5 0.91429 72 5 0.4689077 262 5 0.658979 110 5 1.0000000 31 3 0.8000000 5 0 0.678333 62 5 0.814526 225 5 0.858413 43 5 0.846434 41 5 0.937500 16 2 0.660000 22 2 1.000000 12 0 0.764957 0.857464 0.543170 0.980029 0.870590 0.96795 0.868000 0.909859 0.780692 0.930501 0.867263 0.877348 0.835415 NA 0.909134 0.90000 0.968636 0.980029 0.950177 0.891026 0.903846 0.930952 0.851207 1.000000 0.984648 0.891142 0.946154 0.967308 0.884145 0.888722 0.903907 0.835165 0.5255649 0.6552633 0.8169527 0.9230769 0.6839744 0.872526 0.857631 0.889295 0.922650 0.500000 1.000000 0 0.880208 0.912434 -0.03276746 5 0.882570 0.914997 -0.0324276 0.994409 5.5741e-02 insignificant 1 1.0000000 insignificant 0.985535 0.05382605 insignificant 1 1.0000 insignificant -0.03082684 0.2161626 lowCoverage 1.00000 lowCoverage 0.880208 0.651799 0.2274560 5 0.882570 0.653640 0.2289296 1.2616e-11 9.9999e-01 hypermethylated 3.3200e-10 1.000000 hypermethylated 8.7877e-03 0.99715486 weaklyHypermeth 9.0595e-02 1.00000 weaklyHypermeth 0.1628799 7.7261e-02 lowCoverage 8.6810e-01 lowCoverage 0.880208 0.850746 0.0219656 2 0.882570 0.850564 0.0320050 1.4779e-01 5.5262e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.4959e-01 2.9778e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 3.9202e-02 5.4776e-01 lowCoverage 1.0000e+00 lowCoverage 0.912434 0.651799 0.2537833 5 0.914997 0.653640 0.2613572 1.2101e-10 0.99999990 hypermethylated 3.9035e-09 1.00000 hypermethylated 1.4961e-03 0.99976385 weaklyHypermeth 2.1682e-02 1.00000 weaklyHypermeth 0.1937068 4.5083e-02 lowCoverage 5.7799e-01 lowCoverage 0.912434 0.850746 0.05558690 2 0.91500 0.850564 0.06443267 5.2844e-02 9.5742e-01 lowCoverage 9.4365e-01 1.000000 lowCoverage 5.7917e-01 0.81225941 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0700286 2.9394e-01 lowCoverage 1.00000000 lowCoverage 0.651799 0.850746 -0.1824109 2 0.653640 0.850564 -0.1969246 9.9784e-01 2.5680e-03 lowCoverage 1.0000e+00 3.7765e-02 lowCoverage 9.8927e-01 9.5682e-02 lowCoverage 1.00000000 0.92895192 lowCoverage -0.12367823 2.1661e-01 lowCoverage 1.0000000 lowCoverage chr16 47496803 47497803 136881 ENSG00000222170 0.786667 45 4 0.81988 96 7 0.542865 135 5 0.835034 47 6 0.833333 20 3 0.780195 62 6 0.555556 8 1 0.814815 33 3 0.666667 10 0 1.000000 10 0 0.773016 49 3 0.888889 5 0 0.277778 6 0 0.916667 7 0 0.666667 3 0 0.666667 6 0 NA 0 0 0.733333 17 0 NA 0 0 0.770000 19 1 0.95238 11 1 0.666667 5 0 0.859309 71 7 0.850000 13 1 0.911616 27 2 0.698775 125 7 1.0000000 7 0 NA 0 0 1.000000 4 0 0.788891 140 7 0.786735 90 7 0.94322 64 5 0.2911785 81 7 0.114286 16 2 0.1666667 105 3 0.2366522 52 3 0.182438 72 3 0.278247 110 7 0.230612 50 7 0.533578 59 7 0.409524 72 7 0.471111 40 4 0.437229 58 3 1.000000 1.000000 0.500000 0.666667 1.000000 0.50000 0.666667 0.777778 0.500000 1.000000 0.785714 0.666667 0.333333 0.750000 1.000000 0.00000 NA 1.000000 NA 1.000000 0.857143 1.000000 0.857143 1.000000 1.000000 0.941176 1.000000 NA NA 1.000000 0.650000 1.000000 0.2631579 0.1428571 0.0000000 0.3333333 0.3846154 0.400000 0.428571 0.846154 0.777778 0.000000 0.727273 0 0.756055 0.813285 -0.05141709 0 0.755788 0.803832 -0.0480448 0.916061 4.5222e-02 noCoverage 1 1.0000000 noCoverage 0.907956 0.07039179 noCoverage 1 1.0000 noCoverage -0.11933560 0.0296358 lowCoverage 1.00000 lowCoverage 0.756055 0.302752 0.4362248 0 0.755788 0.315259 0.4405286 2.9122e-19 1.0000e+00 noCoverage 1.8201e-17 1.000000 noCoverage 4.8193e-08 0.99999959 noCoverage 3.0121e-06 1.00000 noCoverage 0.5288679 4.6514e-10 lowCoverage 9.3027e-08 lowCoverage 0.756055 0.458781 0.3290983 0 0.755788 0.431015 0.3247724 2.1184e-12 1.0000e+00 noCoverage 2.7366e-10 1.0000000 noCoverage 1.3306e-07 1.0000e+00 noCoverage 1.6633e-05 1.00000000 noCoverage 3.2404e-01 6.1719e-04 lowCoverage 4.4085e-02 lowCoverage 0.813285 0.302752 0.5101422 3 0.803832 0.315259 0.4885733 5.5214e-21 1.00000000 lowCoverage 5.5214e-19 1.00000 lowCoverage 2.1973e-09 1.00000000 lowCoverage 1.8311e-07 1.00000 lowCoverage 0.6482035 3.8728e-10 lowCoverage 7.7457e-08 lowCoverage 0.813285 0.458781 0.38848921 7 0.80383 0.431015 0.37281719 1.7837e-15 1.0000e+00 hypermethylated 2.9729e-13 1.000000 hypermethylated 3.3279e-09 1.00000000 hypermethylated 1.1093e-06 1.00000 hypermethylated 0.4433707 9.9030e-05 lowCoverage 0.01237873 lowCoverage 0.302752 0.458781 -0.1445250 3 0.315259 0.431015 -0.1157562 9.1683e-01 2.5608e-04 lowCoverage 1.0000e+00 4.9247e-03 lowCoverage 9.7240e-01 2.8840e-03 lowCoverage 1.00000000 0.06930906 lowCoverage -0.20483282 1.1348e-02 lowCoverage 0.2467003 lowCoverage chr16 47496979 47497979 136882 ENSG00000222170 0.786667 45 4 0.81988 96 7 0.542865 135 5 0.835034 47 6 0.833333 20 3 0.780195 62 6 0.555556 8 1 0.814815 33 3 0.666667 10 0 1.000000 10 0 0.773016 49 3 0.888889 5 0 0.277778 6 0 0.916667 7 0 0.666667 3 0 0.666667 6 0 NA 0 0 0.733333 17 0 NA 0 0 0.770000 19 1 0.95238 11 1 0.666667 5 0 0.859309 71 7 0.850000 13 1 0.911616 27 2 0.698775 125 7 1.0000000 7 0 NA 0 0 1.000000 4 0 0.788891 140 7 0.786735 90 7 0.94322 64 5 0.2911785 81 7 0.114286 16 2 0.1666667 105 3 0.2366522 52 3 0.182438 72 3 0.278247 110 7 0.230612 50 7 0.533578 59 7 0.409524 72 7 0.471111 40 4 0.437229 58 3 1.000000 1.000000 0.500000 0.666667 1.000000 0.50000 0.666667 0.777778 0.500000 1.000000 0.785714 0.666667 0.333333 0.750000 1.000000 0.00000 NA 1.000000 NA 1.000000 0.857143 1.000000 0.857143 1.000000 1.000000 0.941176 1.000000 NA NA 1.000000 0.650000 1.000000 0.2631579 0.1428571 0.0000000 0.3333333 0.3846154 0.400000 0.428571 0.846154 0.777778 0.000000 0.727273 0 0.756055 0.813285 -0.05141709 0 0.755788 0.803832 -0.0480448 0.916061 4.5222e-02 noCoverage 1 1.0000000 noCoverage 0.907956 0.07039179 noCoverage 1 1.0000 noCoverage -0.11933560 0.0296358 lowCoverage 1.00000 lowCoverage 0.756055 0.302752 0.4362248 0 0.755788 0.315259 0.4405286 2.9122e-19 1.0000e+00 noCoverage 1.8201e-17 1.000000 noCoverage 4.8193e-08 0.99999959 noCoverage 3.0121e-06 1.00000 noCoverage 0.5288679 4.6514e-10 lowCoverage 9.3027e-08 lowCoverage 0.756055 0.458781 0.3290983 0 0.755788 0.431015 0.3247724 2.1184e-12 1.0000e+00 noCoverage 2.7366e-10 1.0000000 noCoverage 1.3306e-07 1.0000e+00 noCoverage 1.6633e-05 1.00000000 noCoverage 3.2404e-01 6.1719e-04 lowCoverage 4.4085e-02 lowCoverage 0.813285 0.302752 0.5101422 3 0.803832 0.315259 0.4885733 5.5214e-21 1.00000000 lowCoverage 5.5214e-19 1.00000 lowCoverage 2.1973e-09 1.00000000 lowCoverage 1.8311e-07 1.00000 lowCoverage 0.6482035 3.8728e-10 lowCoverage 7.7457e-08 lowCoverage 0.813285 0.458781 0.38848921 7 0.80383 0.431015 0.37281719 1.7837e-15 1.0000e+00 hypermethylated 2.9729e-13 1.000000 hypermethylated 3.3279e-09 1.00000000 hypermethylated 1.1093e-06 1.00000 hypermethylated 0.4433707 9.9030e-05 lowCoverage 0.01237873 lowCoverage 0.302752 0.458781 -0.1445250 3 0.315259 0.431015 -0.1157562 9.1683e-01 2.5608e-04 lowCoverage 1.0000e+00 4.9247e-03 lowCoverage 9.7240e-01 2.8840e-03 lowCoverage 1.00000000 0.06930906 lowCoverage -0.20483282 1.1348e-02 lowCoverage 0.2467003 lowCoverage chr16 48115698 48116698 136948 C16orf78 ENSG00000166152 0.835962 89 3 0.73062 99 6 0.646472 100 7 0.920238 65 4 0.712843 43 4 0.867948 127 7 0.527077 40 3 0.795924 98 7 0.822944 52 4 0.952381 62 7 0.905642 224 7 0.500000 15 1 0.845809 116 7 0.801587 32 3 0.827135 65 7 0.714286 12 1 0.450000 13 1 0.728061 84 5 0.863567 180 6 0.910343 124 7 0.92424 81 7 0.592818 53 3 0.787446 63 7 0.894581 73 6 0.915556 30 2 0.875164 164 7 0.8867091 128 7 0.577778 29 3 0.673102 103 4 0.913595 161 7 0.803077 128 6 0.77009 116 7 0.3737682 156 7 0.308821 146 7 0.4366667 193 5 0.2376984 29 3 0.555564 166 7 0.230748 208 7 0.223551 56 4 0.785443 95 6 0.826478 94 5 0.418910 64 5 0.598344 52 4 0.759089 0.726171 0.536438 0.882228 0.740672 0.79426 0.477891 0.816945 0.754515 0.948980 0.897935 0.521030 0.811913 0.816225 0.733525 0.59864 0.623806 0.650279 0.860940 0.917000 0.935838 0.665896 0.730334 0.856791 0.833674 0.844758 0.793675 0.766989 0.726066 0.874481 0.750329 0.812917 0.2567195 0.1639747 0.5396913 0.1809439 0.3365733 0.320930 0.415921 0.713567 0.674494 0.374343 0.582742 1 0.800000 0.829052 -0.02747908 7 0.818000 0.835688 -0.0176876 0.822961 3.0664e-01 insignificant 1 1.0000000 insignificant 0.589542 0.30612944 insignificant 1 1.0000 insignificant -0.03323810 0.4978744 lowCoverage 1.00000 lowCoverage 0.800000 0.347439 0.4634245 7 0.818000 0.364153 0.4538473 1.7491e-25 1.0000e+00 hypermethylated 1.7491e-23 1.000000 hypermethylated 1.1983e-10 0.99999988 hypermethylated 1.3314e-08 1.00000 hypermethylated 0.4107309 6.6995e-05 lowCoverage 3.3498e-03 lowCoverage 0.800000 0.592798 0.2068061 5 0.818000 0.669713 0.1482872 3.1938e-06 9.7998e-01 hypermethylated 1.7743e-04 1.0000000 hypermethylated 5.5754e-05 9.8254e-01 hypermethylated 3.4412e-03 1.00000000 hypermethylated 1.9740e-01 1.5819e-01 lowCoverage 1.0000e+00 lowCoverage 0.829052 0.347439 0.4701455 7 0.835688 0.364153 0.4715349 2.1970e-21 1.00000000 hypermethylated 2.7463e-19 1.00000 hypermethylated 1.3423e-08 0.99999991 hypermethylated 1.0326e-06 1.00000 hypermethylated 0.4439690 3.1767e-05 hypermethylated 1.7648e-03 hypermethylated 0.829052 0.592798 0.22560808 5 0.83569 0.669713 0.16597481 4.4822e-06 9.9841e-01 hypermethylated 2.9882e-04 1.000000 hypermethylated 4.0993e-04 0.97775404 hypermethylated 2.1575e-02 1.00000 hypermethylated 0.2306346 1.1165e-01 lowCoverage 1.00000000 lowCoverage 0.347439 0.592798 -0.2723651 5 0.364153 0.669713 -0.3055601 1.0000e+00 2.3186e-05 hypomethylated 1.0000e+00 7.7288e-04 hypomethylated 9.9903e-01 6.9373e-03 weaklyHypometh 1.00000000 0.12203146 insignificant -0.21333443 1.3988e-01 lowCoverage 1.0000000 lowCoverage chr16 48118149 48119149 136949 C16orf78 ENSG00000166152 0.933316 241 5 0.89490 120 5 0.901371 121 5 0.943978 325 5 0.975000 31 4 0.966701 223 5 0.990476 41 5 0.900944 80 5 0.972727 72 5 1.000000 58 5 0.944762 79 5 0.925000 43 5 0.935065 73 5 NA 0 0 0.791092 74 5 0.937778 52 5 0.955556 51 5 0.918215 323 5 0.897403 107 5 0.909435 207 5 0.95278 41 5 0.888590 89 5 0.901440 174 5 0.941414 57 5 0.924955 65 5 0.917293 142 5 0.8678571 48 5 0.989474 84 5 0.896255 94 5 0.970735 168 5 0.943144 108 5 0.90018 183 5 0.8623679 110 5 0.787692 32 4 0.8884615 252 4 0.8800000 27 1 0.913644 107 5 0.925858 134 5 0.924040 296 5 0.933696 267 5 0.928198 283 5 0.916978 240 5 0.952989 273 5 0.932786 0.900556 0.898604 0.944054 0.970588 0.96720 0.991317 0.895326 0.975134 1.000000 0.943305 0.923529 0.936058 NA 0.783475 0.92941 0.950327 0.918142 0.898077 0.908938 0.956291 0.882954 0.906882 0.936958 0.931042 0.917099 0.868487 0.990093 0.899995 0.971610 0.940576 0.899401 0.8624096 0.7840724 0.8518700 0.8886275 0.9160056 0.928483 0.927162 0.934297 0.929257 0.920311 0.955950 5 0.928479 0.927374 0.00047889 5 0.928372 0.925932 0.0024401 0.289592 4.6989e-01 insignificant 1 1.0000000 insignificant 0.338833 0.72522427 insignificant 1 1.0000 insignificant 0.00673874 0.6540969 lowCoverage 1.00000 lowCoverage 0.928479 0.886707 0.0421828 5 0.928372 0.874422 0.0539505 1.5943e-04 2.3684e-01 weaklyHypermeth 1.6607e-03 1.000000 weaklyHypermeth 1.3442e-02 0.42857136 weaklyHypermeth 1.2681e-01 1.00000 insignificant 0.0549112 4.1760e-02 lowCoverage 5.6109e-01 lowCoverage 0.928479 0.933775 0.0011500 5 0.928372 0.931092 -0.0027198 2.4147e-02 1.3442e-01 weaklyHypermeth 5.8895e-01 1.0000000 insignificant 9.4335e-02 4.3007e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.8749e-05 9.9558e-01 lowCoverage 1.0000e+00 lowCoverage 0.927374 0.886707 0.0459917 5 0.925932 0.874422 0.0515104 2.3410e-02 0.48690456 weaklyHypermeth 1.9672e-01 1.00000 insignificant 4.7024e-02 0.52639590 weaklyHypermeth 4.1614e-01 1.00000 insignificant 0.0481725 6.6370e-02 lowCoverage 7.5420e-01 lowCoverage 0.927374 0.933775 -0.00683044 5 0.92593 0.931092 -0.00515988 7.7459e-01 3.7721e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8297e-01 0.74739135 insignificant 1.0000e+00 1.00000 insignificant -0.0066700 5.8810e-01 insignificant 1.00000000 insignificant 0.886707 0.933775 -0.0559594 5 0.874422 0.931092 -0.0566703 8.3812e-01 1.1828e-01 insignificant 1.0000e+00 9.7756e-01 insignificant 7.7767e-01 1.6646e-01 insignificant 1.00000000 1.00000000 insignificant -0.05484247 4.0332e-02 lowCoverage 0.5574487 lowCoverage chr16 48134048 48135048 136951 C16orf78 ENSG00000166152 0.789628 336 5 0.51119 345 5 0.700298 162 5 0.687958 262 5 0.649880 130 5 0.794206 412 5 0.870225 256 5 0.764616 263 5 0.718105 156 5 0.848715 111 5 0.887081 407 5 0.779598 81 5 0.564180 188 5 0.733211 115 5 0.675714 195 5 0.854295 97 5 NA 0 0 0.638147 438 5 0.810782 294 5 0.573543 283 5 0.66287 113 5 0.410776 86 5 0.685958 137 5 0.552286 115 5 0.651061 37 5 0.720573 484 5 0.6706954 180 5 0.732278 126 5 0.716524 262 5 0.622768 475 5 0.654159 433 5 0.89277 343 5 0.7561058 182 5 0.778352 181 5 0.8095203 158 5 0.8750000 6 0 0.695584 204 5 0.535388 390 5 0.269749 308 5 0.291389 229 5 0.334796 303 5 0.429898 386 5 0.285701 237 5 0.785276 0.492104 0.672964 0.676231 0.637863 0.79186 0.868668 0.758960 0.712051 0.852755 0.884588 0.767099 0.540300 0.724984 0.668340 0.86424 NA 0.633061 0.806017 0.547670 0.784463 0.362003 0.683486 0.529300 0.613762 0.699233 0.659239 0.711216 0.706067 0.610114 0.637090 0.891364 0.7306765 0.7634912 0.7725791 0.8444088 0.8110700 0.517623 0.232135 0.259430 0.300814 0.501323 0.258437 5 0.723681 0.680287 0.03490172 5 0.724723 0.695027 0.0296962 0.210489 6.7153e-01 insignificant 1 1.0000000 insignificant 0.048330 0.71598283 weaklyHypermeth 1 1.0000 insignificant 0.06462659 0.1304631 lowCoverage 1.00000 lowCoverage 0.723681 0.651786 0.0669197 5 0.724723 0.686500 0.0382237 3.5892e-03 5.1240e-02 weaklyHypermeth 3.1210e-02 1.000000 weaklyHypermeth 2.8061e-01 0.00596000 inconclusive 1.0000e+00 1.00000 insignificant -0.0126386 8.2063e-01 lowCoverage 1.0000e+00 lowCoverage 0.723681 0.391245 0.3772640 5 0.724723 0.345808 0.3789153 1.6751e-19 1.0000e+00 hypermethylated 3.3502e-17 1.0000000 hypermethylated 1.4556e-13 1.0000e+00 hypermethylated 7.2780e-11 1.00000000 hypermethylated 4.0671e-01 4.6795e-07 lowCoverage 5.8493e-05 lowCoverage 0.680043 0.651204 0.0224468 5 0.579189 0.572083 0.0071063 4.5228e-02 0.05365238 weaklyHypermeth 3.5612e-01 1.00000 insignificant 7.3000e-01 0.00194731 inconclusive 1.0000e+00 0.97365 insignificant -0.0772652 2.1283e-01 lowCoverage 1.0000e+00 lowCoverage 0.680043 0.390977 0.36371056 5 0.57919 0.288173 0.29101592 1.0340e-14 1.0000e+00 hypermethylated 1.4771e-12 1.000000 hypermethylated 5.1325e-09 1.00000000 hypermethylated 1.2831e-06 1.00000 hypermethylated 0.3420864 2.8305e-06 hypermethylated 0.00078928 hypermethylated 0.651204 0.390977 0.3131087 5 0.572083 0.288173 0.2839096 5.5574e-08 9.9974e-01 hypermethylated 2.7787e-05 1.0000e+00 hypermethylated 8.6359e-05 1.0000e+00 hypermethylated 0.04317933 1.00000000 hypermethylated 0.41935160 6.9410e-05 lowCoverage 0.0138820 lowCoverage chr16 48134444 48135444 136952 C16orf78 ENSG00000166152 0.826849 683 10 0.59662 426 10 0.802600 238 10 0.787415 475 10 0.779014 198 10 0.840317 626 10 0.867775 396 10 0.828344 385 10 0.768343 212 10 0.881137 223 10 0.863014 589 10 0.832656 130 10 0.731333 263 10 0.771551 163 10 0.748068 298 10 0.882703 136 7 0.000000 1 0 0.720846 958 10 0.754116 494 10 0.691722 501 10 0.78714 211 10 0.616896 142 10 0.780001 238 10 0.654799 180 10 0.783864 87 10 0.799754 611 10 0.7218945 276 10 0.815742 167 10 0.784397 429 10 0.727323 599 10 0.720604 578 10 0.91622 549 10 0.8098324 274 10 0.839342 358 10 0.8225092 469 10 0.6875000 10 0 0.779547 253 10 0.649169 612 10 0.483010 577 10 0.403346 446 10 0.521366 572 10 0.597643 793 10 0.437294 418 10 0.813285 0.562006 0.753093 0.733638 0.723017 0.82324 0.866951 0.804036 0.748142 0.872526 0.871496 0.811040 0.659210 0.750893 0.720706 0.87493 NA 0.693935 0.821426 0.637553 0.823968 0.513751 0.746881 0.633024 0.718186 0.759749 0.692930 0.777857 0.757669 0.686127 0.690938 0.907108 0.7699284 0.8085340 0.8486435 0.8067624 0.8331062 0.588731 0.392134 0.349307 0.439106 0.611913 0.369750 10 0.771301 0.739975 0.01554636 10 0.802709 0.799648 0.0030605 0.768882 3.9142e-01 insignificant 1 1.0000000 insignificant 0.334037 0.42897447 insignificant 1 1.0000 insignificant -0.01033182 0.8313811 insignificant 1.00000 insignificant 0.771270 0.749240 0.0305710 10 0.782980 0.783438 -0.0004584 2.6175e-03 2.3806e-05 weaklyHypermeth 2.3581e-02 0.011903 weaklyHypermeth 5.1428e-01 0.00081875 inconclusive 1.0000e+00 0.81875 insignificant -0.0159286 7.6709e-01 insignificant 1.0000e+00 insignificant 0.771301 0.547594 0.2832317 10 0.802709 0.514877 0.2878314 2.4592e-25 1.0000e+00 hypermethylated 2.4592e-22 1.0000000 hypermethylated 1.1471e-17 1.0000e+00 hypermethylated 1.1471e-14 1.00000000 hypermethylated 2.6019e-01 1.5881e-04 hypermethylated 1.3234e-02 hypermethylated 0.739665 0.748861 0.0195700 10 0.708739 0.712216 -0.0034772 3.3215e-02 0.00043125 weaklyHypermeth 2.7004e-01 0.43125 insignificant 6.8257e-01 0.00010087 inconclusive 1.0000e+00 0.10087 insignificant -0.0055968 8.8880e-01 insignificant 1.0000e+00 insignificant 0.739793 0.547398 0.29359470 10 0.73301 0.471971 0.26103994 2.1070e-20 1.0000e+00 hypermethylated 2.1070e-17 1.000000 hypermethylated 1.3138e-13 1.00000000 hypermethylated 1.3138e-10 1.00000 hypermethylated 0.2705213 1.8163e-04 hypermethylated 0.01651223 hypermethylated 0.748861 0.547432 0.2589131 10 0.712216 0.469423 0.2427935 2.4467e-13 9.9972e-01 hypermethylated 2.4467e-10 1.0000e+00 hypermethylated 2.0085e-07 1.0000e+00 hypermethylated 0.00020085 1.00000000 hypermethylated 0.27611809 2.4452e-04 hypermethylated 0.0276642 hypermethylated chr16 48266531 48267531 136975 C16orf78 ENSG00000166152 0.807957 70 2 0.94000 36 5 0.938889 57 5 0.921429 26 2 0.942857 32 5 0.896970 89 5 0.920833 49 5 0.981818 74 5 0.946667 40 5 0.926190 44 5 0.883553 81 5 1.000000 20 2 0.905556 68 5 NA 0 0 0.812578 90 5 0.950000 14 0 0.960000 18 2 0.877778 48 2 0.968889 66 5 0.941472 82 4 0.83214 26 3 0.900000 34 3 0.838137 49 5 0.933333 27 3 0.950000 18 0 0.935330 90 5 0.9000000 11 0 0.944444 14 2 0.990476 61 5 0.951373 99 5 0.930084 75 5 0.95975 175 5 0.0800000 90 5 0.050000 60 5 NA 0 0 0.0666667 81 5 0.000000 13 1 0.000000 41 3 0.502090 76 4 0.531515 82 5 0.525088 48 2 0.800000 76 2 0.347826 46 2 0.797897 0.960000 0.959259 0.919841 0.930159 0.87407 0.910185 0.977778 0.953333 0.919048 0.879634 1.000000 0.912346 NA 0.799295 0.93889 0.951111 0.918519 0.968148 0.960981 0.794841 0.877778 0.829129 0.918519 0.938889 0.925588 0.877778 0.952575 0.993651 0.940566 0.926243 0.963504 0.0533333 0.0611111 NA 0.0814815 0.0066667 0.000000 0.501393 0.565455 0.498207 0.838889 0.550068 0 0.905378 0.932253 -0.03125754 5 0.907909 0.925470 -0.0175612 0.845750 6.0443e-02 insignificant 1 1.0000000 insignificant 0.540920 0.20728295 insignificant 1 1.0000 insignificant 0.00019694 0.9913060 lowCoverage 1.00000 lowCoverage 0.905378 0.024561 0.8827706 5 0.907909 0.023648 0.8842604 5.9406e-65 1.0000e+00 hypermethylated 5.9406e-62 1.000000 hypermethylated 1.8413e-13 1.00000000 hypermethylated 6.1377e-11 1.00000 hypermethylated 0.8829527 4.6393e-11 lowCoverage 1.5464e-08 lowCoverage 0.905378 0.515244 0.3750513 2 0.907909 0.574739 0.3331695 1.5057e-19 1.0000e+00 lowCoverage 3.3502e-17 1.0000000 lowCoverage 2.3786e-09 1.0000e+00 lowCoverage 7.9286e-07 1.00000000 lowCoverage 3.8098e-01 5.8423e-03 lowCoverage 2.4343e-01 lowCoverage 0.932253 0.024561 0.9014613 5 0.925470 0.023648 0.9018216 3.2519e-54 1.00000000 hypermethylated 3.2519e-51 1.00000 hypermethylated 1.5283e-11 1.00000000 hypermethylated 3.3285e-09 1.00000 hypermethylated 0.8827558 4.6265e-12 lowCoverage 4.6265e-09 lowCoverage 0.932253 0.515244 0.41630582 2 0.92547 0.574739 0.35073069 3.9919e-17 1.0000e+00 lowCoverage 1.3306e-14 1.000000 lowCoverage 8.6798e-08 0.99999987 lowCoverage 1.4466e-05 1.00000 lowCoverage 0.3807854 5.6511e-03 lowCoverage 0.26910026 lowCoverage 0.024561 0.515244 -0.5147048 2 0.023648 0.574739 -0.5510909 1.0000e+00 1.6388e-12 lowCoverage 1.0000e+00 8.1938e-10 lowCoverage 1.0000e+00 3.7602e-07 lowCoverage 1.00000000 0.00037602 lowCoverage -0.50197043 1.7790e-03 lowCoverage 0.0847162 lowCoverage chr16 48371713 48372713 136983 ENSG00000221134 0.942222 168 5 0.81153 98 5 0.851266 126 5 0.818551 66 5 0.887446 43 5 0.947110 122 5 0.983333 120 5 0.951471 52 5 0.880376 93 5 0.933704 78 5 0.907665 114 5 0.858355 130 5 0.863002 87 5 NA 0 0 0.912689 130 5 0.946328 125 5 0.907937 104 5 0.878422 67 5 0.908234 96 5 0.932045 148 5 0.88395 76 5 0.808333 27 2 0.922156 156 5 1.000000 61 4 0.942857 26 2 0.914735 114 5 0.9448916 50 3 0.876190 38 5 0.666410 39 3 0.825088 114 5 0.945665 79 5 0.93915 265 5 0.4684258 115 5 0.616865 103 5 0.7250000 56 4 0.4190476 60 5 0.922500 55 5 0.164984 137 7 0.701118 117 5 0.495379 208 5 0.925025 71 7 0.850407 126 5 0.844349 81 7 0.914574 0.815372 0.842503 0.814699 0.884769 0.92693 0.982249 0.949052 0.878454 0.913993 0.898453 0.879212 0.857721 NA 0.911913 0.94936 0.899737 0.845468 0.890307 0.933337 0.891829 0.818047 0.921938 0.988731 0.939138 0.913010 0.923205 0.863201 0.723297 0.952752 0.901886 0.937106 0.5191726 0.5773331 0.7761590 0.1775148 0.8866864 0.059760 0.692786 0.699275 0.868304 0.848408 0.821510 3 0.896797 0.911005 -0.01497978 5 0.929556 0.903998 0.0255583 0.971194 4.4078e-01 insignificant 1 1.0000000 insignificant 0.954408 0.32545320 insignificant 1 1.0000 insignificant 0.01202194 0.6704952 lowCoverage 1.00000 lowCoverage 0.896797 0.415058 0.4678054 5 0.929556 0.373323 0.5562335 1.7823e-21 1.0000e+00 hypermethylated 1.4852e-19 1.000000 hypermethylated 7.1512e-06 0.99999881 hypermethylated 2.1670e-04 1.00000 hypermethylated 0.3483373 2.2603e-02 lowCoverage 3.4774e-01 lowCoverage 0.896797 0.774461 0.1343329 5 0.929556 0.771928 0.1576281 7.6261e-09 9.9997e-01 weaklyHypermeth 5.4472e-07 1.0000000 weaklyHypermeth 1.2114e-04 1.0000e+00 weaklyHypermeth 6.7299e-03 1.00000000 weaklyHypermeth 1.3789e-01 1.4465e-01 lowCoverage 1.0000e+00 lowCoverage 0.911005 0.415058 0.4843202 5 0.903998 0.373323 0.5306752 1.2852e-14 0.99999999 hypermethylated 6.1199e-13 1.00000 hypermethylated 1.9793e-05 0.99996362 hypermethylated 5.9979e-04 1.00000 hypermethylated 0.3363154 2.4801e-02 lowCoverage 3.7578e-01 lowCoverage 0.911005 0.774461 0.15293325 5 0.90400 0.771928 0.13206974 6.8535e-09 9.9978e-01 weaklyHypermeth 8.5668e-07 1.000000 weaklyHypermeth 1.2777e-04 0.99989585 weaklyHypermeth 8.5177e-03 1.00000 weaklyHypermeth 0.1258638 1.7871e-01 lowCoverage 1.00000000 lowCoverage 0.415058 0.774461 -0.3419579 5 0.373323 0.771928 -0.3986054 1.0000e+00 1.0826e-04 hypomethylated 1.0000e+00 2.5776e-03 hypomethylated 9.9843e-01 6.5495e-02 insignificant 1.00000000 0.66831717 insignificant -0.21045157 1.4597e-01 insignificant 1.0000000 insignificant chr16 48425710 48426710 136996 ZNF423 ENSG00000102935 0.241919 386 14 0.23731 357 15 0.386408 352 13 0.224371 417 13 0.196531 205 13 0.304139 524 14 0.218808 303 15 0.291837 304 15 0.222352 320 13 0.226715 333 14 0.314612 360 15 0.325834 226 12 0.161404 308 12 0.225644 146 7 0.137982 349 14 0.212452 175 7 0.077473 154 11 0.267667 390 13 0.150869 227 13 0.197235 443 14 0.25594 213 14 0.171010 377 13 0.291192 267 14 0.140000 193 12 0.263628 518 14 0.229587 445 15 0.1674742 309 12 0.275460 160 10 0.251383 211 12 0.185872 424 15 0.252232 459 15 0.23099 478 14 0.0925311 377 12 0.060409 218 10 0.1378018 254 8 0.0014286 210 12 0.078194 211 14 0.157891 361 14 0.181924 517 14 0.254905 432 14 0.103152 549 14 0.227009 422 13 0.147948 404 13 0.360857 0.313339 0.434465 0.279944 0.206287 0.40912 0.284395 0.258953 0.235201 0.216378 0.347409 0.290363 0.131392 0.188564 0.198449 0.30517 0.260129 0.222526 0.166621 0.277951 0.386371 0.175966 0.367573 0.150729 0.310088 0.326724 0.239575 0.457095 0.305786 0.206444 0.261461 0.331891 0.1111544 0.0580499 0.0885355 0.0074933 0.0876848 0.137758 0.147463 0.154186 0.112570 0.129632 0.134473 8 0.275725 0.276270 -0.00798537 14 0.271713 0.205427 0.0662862 0.298136 6.5647e-01 insignificant 1 1.0000000 insignificant 0.792543 0.59135863 insignificant 1 1.0000 insignificant 0.00484778 0.8210909 insignificant 1.00000 insignificant 0.275494 0.097486 0.1918162 12 0.228873 0.093258 0.1356146 2.1771e-16 1.0000e+00 weaklyHypermeth 9.0712e-15 1.000000 weaklyHypermeth 3.8203e-13 0.99999998 weaklyHypermeth 9.5509e-11 1.00000 weaklyHypermeth 0.1430356 3.9648e-04 weaklyHypermeth 1.3672e-02 weaklyHypermeth 0.275538 0.133879 0.1316542 14 0.228873 0.268070 -0.0391974 4.1880e-06 9.3191e-01 weaklyHypermeth 2.2042e-04 1.0000000 weaklyHypermeth 1.1472e-05 9.1991e-01 weaklyHypermeth 8.8243e-04 1.00000000 weaklyHypermeth 4.8091e-02 1.7000e-01 insignificant 1.0000e+00 insignificant 0.276339 0.097486 0.1889565 13 0.217511 0.093258 0.1242528 1.2774e-15 0.99572332 weaklyHypermeth 7.0965e-14 1.00000 weaklyHypermeth 6.5585e-12 0.99999983 weaklyHypermeth 2.1862e-09 1.00000 weaklyHypermeth 0.1381879 6.3345e-04 weaklyHypermeth 2.0434e-02 weaklyHypermeth 0.276569 0.133506 0.13451836 14 0.22218 0.222324 -0.00014783 4.3520e-06 4.4238e-01 weaklyHypermeth 2.9882e-04 1.000000 weaklyHypermeth 3.2023e-04 0.82950228 weaklyHypermeth 1.7791e-02 1.00000 weaklyHypermeth 0.0432428 2.0435e-01 insignificant 1.00000000 insignificant 0.097546 0.133506 -0.0485380 12 0.099087 0.222324 -0.1232378 9.6428e-01 4.9866e-08 weaklyHypometh 1.0000e+00 3.3244e-06 weaklyHypometh 9.9982e-01 1.8653e-06 weaklyHypometh 1.00000000 0.00046632 weaklyHypometh -0.09494508 2.7139e-02 weaklyHypometh 0.4523191 insignificant chr16 48457820 48458820 136999 ZNF423 ENSG00000102935 0.319251 206 6 0.32822 210 10 0.480633 159 10 0.290578 156 8 0.283044 147 10 0.260536 236 6 0.336829 175 10 0.420944 181 10 0.304092 172 7 0.340220 159 10 0.469559 244 10 0.373333 68 4 0.117351 241 6 0.524531 51 2 0.265987 230 10 0.383598 58 6 0.209704 145 5 0.198030 165 6 0.120903 195 6 0.086943 335 6 0.63227 109 10 0.063908 118 6 0.498620 136 6 0.195942 122 10 0.269709 331 6 0.235667 321 10 0.3483821 170 10 0.397269 55 2 0.360457 179 6 0.177785 443 10 0.093758 359 10 0.72983 283 6 0.0875451 223 10 0.136718 205 10 0.1260684 389 8 0.0572222 144 10 0.431625 146 10 0.062093 384 10 0.090543 248 10 0.216370 287 9 0.067381 223 7 0.120194 214 6 0.199348 230 10 0.205094 0.328985 0.396228 0.199153 0.234106 0.36946 0.285622 0.422184 0.334538 0.375383 0.540191 0.470364 0.101047 0.328430 0.190157 0.47631 0.121206 0.249834 0.118523 0.112217 0.571474 0.075851 0.412943 0.230996 0.221225 0.257140 0.375459 0.375483 0.231941 0.145035 0.082260 0.632804 0.0679681 0.1205919 0.0401047 0.1139335 0.3408442 0.040333 0.036366 0.152659 0.059594 0.112914 0.144587 4 0.286159 0.295914 -0.01625501 9 0.296805 0.293671 0.0031341 0.765984 6.9651e-01 insignificant 1 1.0000000 insignificant 0.832101 0.51437765 insignificant 1 1.0000 insignificant -0.02791906 0.6743280 insignificant 1.00000 insignificant 0.286159 0.092867 0.1965249 9 0.296805 0.193887 0.1029185 1.1895e-12 9.3633e-01 weaklyHypermeth 3.7171e-11 1.000000 weaklyHypermeth 2.2941e-07 0.99398688 weaklyHypermeth 1.0428e-05 1.00000 weaklyHypermeth 0.1555022 4.3434e-02 weaklyHypermeth 5.6417e-01 insignificant 0.286159 0.117304 0.1664620 9 0.296805 0.139508 0.1572972 2.3181e-07 9.9999e-01 weaklyHypermeth 1.5454e-05 1.0000000 weaklyHypermeth 6.7016e-07 9.9999e-01 weaklyHypermeth 7.4462e-05 1.00000000 weaklyHypermeth 1.6695e-01 1.3536e-03 weaklyHypermeth 8.4598e-02 weaklyHypermeth 0.295887 0.093226 0.2020860 10 0.293008 0.194396 0.0986119 5.1867e-08 0.98819476 hypermethylated 1.1275e-06 1.00000 hypermethylated 1.8328e-05 0.99997803 hypermethylated 5.7274e-04 1.00000 hypermethylated 0.1834213 4.3996e-02 weaklyHypermeth 5.7138e-01 insignificant 0.295914 0.117304 0.17976567 10 0.29367 0.139508 0.15416319 5.7031e-05 9.9985e-01 weaklyHypermeth 2.7157e-03 1.000000 weaklyHypermeth 1.1100e-04 0.99999966 weaklyHypermeth 7.9287e-03 1.00000 weaklyHypermeth 0.1948659 1.0391e-02 weaklyHypermeth 0.43294725 insignificant 0.092867 0.117304 -0.0351790 10 0.193887 0.139508 0.0543788 9.8365e-01 8.3633e-02 insignificant 1.0000e+00 7.4012e-01 insignificant 8.9504e-01 4.1383e-01 insignificant 1.00000000 1.00000000 insignificant 0.01144469 8.6487e-01 insignificant 1.0000000 insignificant chr16 48994377 48995377 137011 BRD7 ENSG00000166164 0.858009 46 5 0.915962 72 2 0.766667 16 0 0.928571 78 5 0.900000 10 0 0.956725 60 5 0.893333 30 5 0.894462 78 5 0.866367 90 5 0.758333 27 2 0.887886 59 5 0.872063 40 5 0.989443 137 5 NA 0 0 0.931863 75 5 0.000000 1 0 0.000000 1 0 0.600000 26 5 0.964382 98 5 0.817957 116 5 0.875000 35 4 0.736190 27 4 0.901362 93 5 0.0000000 1 0 0.931429 31 5 0.698202 123 5 0.500000 4 0 0.6666667 3 0 1.000000 2 0 0.9656058 159 5 0.8942432 164 5 0.9229153 150 5 0.3174603 142 5 NA 0 0 1.000000 20 2 NA 0 0 0.512778 40 5 0.406597 152 5 0.949206 64 5 0.909524 45 5 NA 0 0 0.5978022 69 5 0.717949 49 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.900943 0.910354 -0.01033705 5 0.880374 0.891206 -0.0108320 0.70554068 5.2121e-01 insignificant 1.00000 1.000000 insignificant 0.41061725 0.5848875 insignificant 1.00000 1.0000 insignificant 0.02141937 0.83942810 lowCoverage 1.00000 lowCoverage 0.900943 0.5028249 0.393473 5 0.880374 0.416485 0.463888 7.4891e-18 1.0000e+00 hypermethylated 6.2409e-16 1.0000e+00 hypermethylated 5.0410e-05 1.0000e+00 hypermethylated 2.5205e-03 1.0000e+00 hypermethylated 0.2198452 2.5267e-01 lowCoverage 1.0000e+00 lowCoverage 0.900943 0.806167 0.080282 5 0.880374 0.770618 0.1097552 3.1947e-02 9.3766e-01 weaklyHypermeth 5.7049e-01 1.0000000 insignificant 4.1144e-01 7.0135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0145664 8.9406e-01 lowCoverage 1.0000000 lowCoverage 0.910354 0.5028249 0.4077614 5 0.891206 0.416485 0.4747204 7.9412e-14 1.0000e+00 hypermethylated 6.1086e-12 1.0000e+00 hypermethylated 5.9311e-04 9.9999e-01 hypermethylated 1.6946e-02 1.0000e+00 hypermethylated 0.1984258 3.0362e-01 lowCoverage 1.0000e+00 lowCoverage 0.910354 0.806167 0.0952970 5 0.891206 0.770618 0.1205872 1.9617e-02 9.6470e-01 weaklyHypermeth 3.9234e-01 1.0000e+00 insignificant 4.7110e-01 6.7173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0359858 7.6250e-01 lowCoverage 1.000000 lowCoverage 0.5028249 0.806167 -0.34287609 5 0.416485 0.770618 -0.3541332 9.9988e-01 8.7552e-05 hypomethylated 1.0000e+00 4.6080e-03 hypomethylated 9.9994e-01 5.2859e-03 weaklyHypometh 1.0000e+00 2.6244e-01 insignificant -0.234412 2.3829e-01 lowCoverage 1.00000000 lowCoverage chr16 49194531 49195531 137033 NKD1 ENSG00000140807 0.849825 529 13 0.747456 555 13 0.874691 318 13 0.813274 461 12 0.844316 182 14 0.824879 621 13 0.769941 330 14 0.881618 281 13 0.850080 237 10 0.788497 267 12 0.880003 544 13 0.806084 144 10 0.704029 307 10 0.800000 39 4 0.793226 283 13 0.884425 140 12 0.791866 143 7 0.499431 448 13 0.922158 418 13 0.889496 451 13 0.900214 145 12 0.679245 123 12 0.832962 333 13 0.8203465 187 13 0.696504 667 10 0.824149 584 13 0.777096 171 12 0.8873639 135 9 0.854003 509 13 0.7915950 623 13 0.9131362 567 13 0.9301900 669 13 0.0434692 575 13 0.089831 429 13 0.019841 436 11 0.039770 442 12 0.080145 384 12 0.042701 855 13 0.867828 628 13 0.760680 494 13 0.711916 597 13 0.7547588 533 13 0.738227 422 13 0.843907 0.794390 0.875448 0.815992 0.891440 0.896142 0.810849 0.860964 0.903076 0.856421 0.876246 0.892455 0.763618 0.910082 0.833742 0.8661213 0.8259915 0.508287 0.9129926 0.878812 0.874404 0.616015 0.893522 0.8300045 0.725110 0.8874578 0.7785229 0.864673 0.858038 0.8688231 0.9031296 0.928364 0.036506 0.083654 0.030656 0.021789 0.0849128 0.0415317 0.841435 0.722860 0.684734 0.6798276 0.693489 8 0.836345 0.866539 -0.02586844 13 0.765161 0.750112 0.0150488 0.96006627 2.9134e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.50616115 0.3487003 insignificant 1.00000 1.0000 insignificant -0.01480226 0.63487130 insignificant 1.00000 insignificant 0.840541 0.0452068 0.793246 13 0.840021 0.053954 0.786066 3.3967e-151 1.0000e+00 hypermethylated 3.3967e-148 1.0000e+00 hypermethylated 1.1865e-32 1.0000e+00 hypermethylated 1.1865e-29 1.0000e+00 hypermethylated 0.7581385 1.9536e-21 hypermethylated 1.9536e-18 hypermethylated 0.840541 0.745978 0.086422 13 0.840021 0.768450 0.0715711 2.7891e-07 9.2594e-01 weaklyHypermeth 1.2678e-05 1.0000000 weaklyHypermeth 2.5076e-07 9.8450e-01 weaklyHypermeth 2.2796e-05 1.0000e+00 weaklyHypermeth 0.0440828 2.2018e-01 insignificant 1.0000000 insignificant 0.867460 0.0452068 0.8196555 13 0.865514 0.053954 0.8115594 7.6798e-130 1.0000e+00 hypermethylated 7.6798e-127 1.0000e+00 hypermethylated 1.5823e-29 1.0000e+00 hypermethylated 1.5823e-26 1.0000e+00 hypermethylated 0.7729407 9.7127e-15 hypermethylated 9.7127e-12 hypermethylated 0.867460 0.745978 0.1031262 13 0.865514 0.768450 0.0970642 3.6753e-08 9.9894e-01 weaklyHypermeth 2.6252e-06 1.0000e+00 weaklyHypermeth 5.0599e-05 9.9932e-01 weaklyHypermeth 4.1507e-03 1.0000e+00 weaklyHypermeth 0.0588851 1.2554e-01 insignificant 1.000000 insignificant 0.0451778 0.746073 -0.72327389 13 0.050101 0.784989 -0.7348884 1.0000e+00 2.6216e-71 hypomethylated 1.0000e+00 2.6216e-68 hypomethylated 1.0000e+00 3.1861e-18 hypomethylated 1.0000e+00 3.1861e-15 hypomethylated -0.714056 1.0358e-06 hypomethylated 0.00051791 hypomethylated chr16 49509301 49510301 137049 ENSG00000199771 0.842277 321 9 0.742383 166 9 0.696082 139 9 0.910082 265 9 0.862434 70 9 0.881466 366 9 0.870767 75 6 0.889736 160 9 0.859110 164 9 0.973760 124 9 0.892117 245 9 0.696633 52 4 0.845030 194 9 0.747619 22 2 0.857672 135 9 0.000000 3 0 0.618146 57 5 0.666225 348 9 0.896054 105 9 0.892830 278 9 0.814506 61 6 0.315877 223 9 0.880517 173 9 0.8094424 136 9 0.778807 97 9 0.869778 182 9 0.862374 112 9 0.7519536 91 9 0.853784 138 9 0.8945628 171 9 0.8329549 163 9 0.9236489 401 9 0.5086613 230 9 0.442966 171 9 0.395248 162 5 0.046296 124 9 0.517157 91 9 0.003367 265 9 0.386130 387 9 0.459394 322 9 0.630563 335 9 0.5094711 275 9 0.589091 283 9 0.824868 0.759775 0.670975 0.890694 0.887813 0.889231 0.859937 0.891299 0.851252 0.976529 0.876193 0.727786 0.836241 0.749940 0.865118 NA 0.5884419 0.657893 0.8928656 0.890079 0.813724 0.330218 0.884915 0.7773111 0.767919 0.8777568 0.8634117 0.801376 0.843031 0.8706849 0.8093507 0.918151 0.488571 0.401917 0.391432 0.047669 0.5184324 0.0034669 0.385079 0.446632 0.590806 0.4945129 0.549334 6 0.830344 0.797741 0.03538319 9 0.837746 0.801685 0.0360610 0.12081776 9.8841e-01 insignificant 1.00000 1.000000 insignificant 0.48957391 0.7751780 insignificant 1.00000 1.0000 insignificant -0.01699614 0.79675134 insignificant 1.00000 insignificant 0.830344 0.2857143 0.546926 9 0.837746 0.291551 0.546195 2.0437e-42 1.0000e+00 hypermethylated 1.0218e-39 1.0000e+00 hypermethylated 8.7008e-17 1.0000e+00 hypermethylated 4.3504e-14 1.0000e+00 hypermethylated 0.4630719 2.6856e-03 weaklyHypermeth 9.9468e-02 weaklyHypermeth 0.830344 0.473159 0.345224 9 0.837746 0.509905 0.3278416 9.1948e-31 1.0000e+00 hypermethylated 3.0649e-28 1.0000000 hypermethylated 2.3820e-13 1.0000e+00 hypermethylated 7.9400e-11 1.0000e+00 hypermethylated 0.2670911 8.9640e-04 hypermethylated 0.0596129 hypermethylated 0.797741 0.2857143 0.5140664 9 0.801685 0.291551 0.5101339 3.4138e-21 1.0000e+00 hypermethylated 1.1379e-18 1.0000e+00 hypermethylated 1.3703e-13 1.0000e+00 hypermethylated 6.8516e-11 1.0000e+00 hypermethylated 0.4800681 2.2538e-03 weaklyHypermeth 9.7992e-02 weaklyHypermeth 0.797741 0.473159 0.2996060 9 0.801685 0.509905 0.2917806 1.2510e-12 1.0000e+00 hypermethylated 2.0850e-10 1.0000e+00 hypermethylated 3.2754e-09 1.0000e+00 hypermethylated 1.0918e-06 1.0000e+00 hypermethylated 0.2840873 7.3848e-04 hypermethylated 0.067135 hypermethylated 0.2857143 0.473159 -0.20084833 9 0.291551 0.509905 -0.2183533 9.9999e-01 4.3652e-04 hypomethylated 1.0000e+00 1.9842e-02 hypomethylated 9.9918e-01 1.6159e-02 weaklyHypometh 1.0000e+00 5.2910e-01 insignificant -0.195981 1.0333e-01 insignificant 1.00000000 insignificant chr16 49582388 49583388 137059 ENSG00000199771 0.933354 391 7 0.723856 68 6 0.898718 57 7 0.936130 296 6 0.663547 55 3 0.915549 460 7 0.765052 78 7 0.942005 126 7 0.735839 53 3 0.891414 68 7 0.847921 191 7 0.833333 17 2 0.758781 96 7 0.771350 49 2 0.913605 74 7 0.500000 24 3 0.333333 3 0 0.937993 894 6 0.958046 147 7 0.840061 383 7 0.742542 89 7 0.849063 128 7 0.952485 78 7 0.8407407 78 8 0.773042 208 5 0.965608 91 7 0.759272 195 8 0.5666667 37 3 0.848214 111 7 0.9152961 138 7 0.9226641 99 7 0.8510900 339 7 0.8076453 98 7 0.785616 216 7 0.750000 61 4 0.500000 2 0 0.846528 80 7 0.932570 197 7 0.953413 237 7 0.969381 259 7 0.951361 425 7 0.9678571 171 5 0.971275 176 7 0.925830 0.816977 0.906134 0.898199 0.882725 0.936181 0.929561 0.948285 0.825019 0.894259 0.844856 0.858630 0.868167 0.930955 0.901989 0.9852124 NA 0.954059 0.9298705 0.950985 0.778176 0.937014 0.889823 0.9641350 0.987653 0.9171790 0.9739404 0.961795 0.966546 0.8459268 0.9068853 0.949193 0.839222 0.750432 0.975564 0.585479 0.8558368 0.8320768 0.929381 0.964519 0.945697 0.9905063 0.960203 1 0.915840 0.928931 -0.02123949 7 0.703801 0.662868 0.0409329 0.98748026 6.8050e-02 insignificant 1.00000 1.000000 insignificant 0.96878473 0.2171924 insignificant 1.00000 1.0000 insignificant -0.02722933 0.57583458 insignificant 1.00000 insignificant 0.915581 0.8822630 0.025243 7 0.653530 0.817615 -0.164085 5.9883e-02 4.0511e-01 insignificant 7.7770e-01 1.0000e+00 insignificant 9.0540e-01 3.2299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0346011 6.3172e-01 insignificant 1.0000e+00 insignificant 0.921647 0.950315 -0.028720 7 0.918677 0.957027 -0.0383504 9.6861e-01 2.1476e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9783e-01 4.9452e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1576631 3.1680e-04 weaklyHypometh 0.0287996 weaklyHypometh 0.928931 0.8819018 0.0473460 7 0.662868 0.803585 -0.1407171 9.3938e-03 8.2785e-01 weaklyHypermeth 1.5656e-01 1.0000e+00 insignificant 3.5307e-01 7.4934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0618305 3.8878e-01 insignificant 1.0000e+00 insignificant 0.938098 0.950315 -0.0083126 7 0.935494 0.957027 -0.0215330 7.0387e-01 2.8767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3753e-01 3.9722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1304338 1.8434e-03 weaklyHypometh 0.102409 insignificant 0.8888889 0.950315 -0.05982222 7 0.826660 0.957027 -0.1303678 8.9782e-01 1.9649e-03 weaklyHypometh 1.0000e+00 6.5496e-02 weaklyHypometh 8.8257e-01 1.4647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.192264 2.3458e-02 weaklyHypometh 0.65162294 insignificant chr16 49634533 49635533 137072 ENSG00000199771 0.929939 228 5 0.882253 122 5 0.914011 138 5 0.941887 198 5 0.946520 50 4 0.938367 140 4 0.866667 22 2 0.843077 75 5 0.894643 72 4 0.914545 100 5 0.907431 132 5 0.898901 32 3 0.933030 102 5 NA 0 0 0.892630 92 5 0.691017 40 5 0.977778 24 2 0.870249 190 4 0.862588 98 5 0.871608 198 5 0.933333 49 4 0.829369 69 4 0.944759 88 5 0.8343434 53 4 0.961818 44 4 0.891077 127 5 0.783333 41 4 0.9055556 19 1 0.831373 70 5 0.9131619 156 4 0.9124237 118 5 0.9549281 235 5 0.9147186 107 5 0.754497 57 5 1.000000 117 4 0.671429 28 4 0.757369 66 5 0.621100 120 5 0.917129 186 5 0.899656 204 5 0.812573 222 4 0.9297008 196 4 0.928502 224 5 0.914652 0.873546 0.871431 0.941046 0.913685 0.948389 0.823516 0.858890 0.882474 0.914180 0.893750 0.916408 0.938513 NA 0.880009 0.7688330 0.9515670 0.811606 0.8472421 0.894023 0.967236 0.775694 0.947536 0.8821549 0.960528 0.8876716 0.7517094 0.930437 0.840992 0.9005553 0.9308725 0.947263 0.924020 0.742504 1.000000 0.530525 0.7862892 0.6274097 0.897376 0.928531 0.904162 0.9169436 0.901759 2 0.889917 0.905519 -0.01554610 5 0.888811 0.900720 -0.0119086 0.92081182 2.5611e-01 insignificant 1.00000 1.000000 insignificant 0.73552051 0.2838488 insignificant 1.00000 1.0000 insignificant 0.00224418 0.91840899 lowCoverage 1.00000 lowCoverage 0.889917 0.8242424 0.069893 4 0.888811 0.798901 0.089910 3.9992e-03 8.9402e-01 lowCoverage 5.9689e-02 1.0000e+00 lowCoverage 2.3713e-01 7.3992e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1070147 1.3180e-01 lowCoverage 1.0000e+00 lowCoverage 0.889917 0.910853 -0.024147 4 0.888811 0.903797 -0.0149854 9.5300e-01 2.1267e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.4486e-01 5.4483e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0039785 8.8180e-01 lowCoverage 1.0000000 lowCoverage 0.905519 0.8242424 0.0884826 4 0.900720 0.798901 0.1018190 1.1755e-02 9.7785e-01 lowCoverage 1.9271e-01 1.0000e+00 lowCoverage 1.2224e-01 9.5990e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1047706 1.4007e-01 lowCoverage 1.0000e+00 lowCoverage 0.905519 0.910853 -0.0082582 4 0.900720 0.903797 -0.0030768 7.5453e-01 5.9266e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.6850e-01 5.0480e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0062226 8.2662e-01 lowCoverage 1.000000 lowCoverage 0.8242424 0.910853 -0.09406028 4 0.798901 0.903797 -0.1048958 9.4953e-01 1.1196e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6926e-01 5.4000e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.110993 1.2581e-01 lowCoverage 1.00000000 lowCoverage chr16 49983278 49984278 137124 SALL1 ENSG00000103449 0.023919 711 10 0.121718 515 9 0.151060 327 9 0.121653 682 10 0.014380 349 9 0.076978 1002 9 0.111494 487 9 0.017363 444 9 0.028535 606 9 0.077895 473 9 0.034031 478 9 0.134977 308 9 0.017948 482 9 0.062567 311 9 0.038164 539 9 0.092352 248 10 0.040489 199 7 0.147274 680 10 0.006250 304 10 0.019324 824 9 0.023333 154 9 0.036056 368 9 0.038712 467 10 0.0021277 276 9 0.044916 261 9 0.074950 621 9 0.104675 381 9 0.0625000 220 10 0.095597 420 9 0.0991884 699 9 0.0011696 604 9 0.0302963 778 9 0.4203573 399 9 0.380632 248 9 0.397727 100 4 0.193750 46 3 0.355432 322 9 0.265840 517 10 0.130511 1139 10 0.141266 658 10 0.051494 1089 10 0.1263571 595 8 0.245060 746 10 0.020130 0.029413 0.077344 0.032158 0.011403 0.075496 0.015755 0.026433 0.029891 0.018586 0.035595 0.044498 0.018918 0.059323 0.036325 0.0016460 0.0380337 0.142979 0.0049911 0.017813 0.023401 0.033220 0.033486 0.0047422 0.049746 0.0098754 0.0063341 0.036830 0.020319 0.0097661 0.0023462 0.034488 0.260513 0.371840 0.189536 0.136367 0.3724926 0.1842387 0.034294 0.127809 0.049269 0.1383121 0.090941 9 0.038546 0.021147 0.01760140 9 0.077007 0.084797 -0.0077903 0.00192349 9.9976e-01 weaklyHypermeth 0.64116 1.000000 insignificant 0.00058745 0.9999403 weaklyHypermeth 0.29373 1.0000 insignificant 0.01579191 0.30783600 insignificant 1.00000 insignificant 0.038539 0.2463235 -0.207580 9 0.071507 0.292910 -0.221403 1.0000e+00 3.4512e-34 hypomethylated 1.0000e+00 3.4512e-31 hypomethylated 1.0000e+00 4.4067e-10 hypomethylated 1.0000e+00 4.4067e-07 hypomethylated -0.2687044 3.7525e-04 hypomethylated 3.6580e-02 hypomethylated 0.038562 0.074994 -0.039363 9 0.083424 0.233627 -0.1502025 1.0000e+00 1.9466e-06 weaklyHypometh 1.0000e+00 0.0019466 weaklyHypometh 1.0000e+00 3.0423e-08 weaklyHypometh 1.0000e+00 3.0423e-05 weaklyHypometh -0.0720192 7.9143e-02 insignificant 1.0000000 insignificant 0.021163 0.2466258 -0.2266590 9 0.091864 0.341728 -0.2498643 1.0000e+00 6.0419e-29 hypomethylated 1.0000e+00 6.0419e-26 hypomethylated 1.0000e+00 1.2619e-13 hypomethylated 1.0000e+00 1.2619e-10 hypomethylated -0.2844963 2.9464e-04 hypomethylated 3.1904e-02 hypomethylated 0.021167 0.074775 -0.0571219 9 0.100215 0.163957 -0.0637415 1.0000e+00 8.4926e-14 weaklyHypometh 1.0000e+00 8.4926e-11 weaklyHypometh 1.0000e+00 5.0597e-14 weaklyHypometh 1.0000e+00 5.0597e-11 weaklyHypometh -0.0878111 4.3879e-02 weaklyHypometh 1.000000 insignificant 0.2463145 0.074994 0.16884565 9 0.313950 0.233627 0.0803235 1.3409e-06 9.9999e-01 weaklyHypermeth 1.9156e-04 1.0000e+00 weaklyHypermeth 6.2045e-03 9.9940e-01 weaklyHypermeth 5.1704e-01 1.0000e+00 insignificant 0.196685 2.4658e-03 weaklyHypermeth 0.12328965 insignificant chr16 50228347 50229347 137182 SALL1 ENSG00000103449 0.073151 215 3 0.055476 204 5 0.097390 165 5 0.138187 247 5 0.057936 129 5 0.251781 280 4 0.051263 161 5 0.080191 239 5 0.030472 204 4 0.121053 184 4 0.037997 207 5 0.265186 142 3 0.030546 208 3 0.027066 136 3 0.047882 204 4 0.120802 219 4 0.037037 31 3 0.087064 269 3 0.000000 108 3 0.014672 223 4 0.272727 58 4 0.118499 96 3 0.070763 138 4 0.0080000 102 5 0.023810 96 3 0.056866 303 5 0.037273 98 4 0.0075758 75 4 0.040067 131 3 0.0227532 350 5 0.0490931 283 5 0.0089552 189 4 0.1492754 168 5 0.114286 79 4 0.000000 161 3 0.020833 29 2 0.158333 155 5 0.347445 186 5 0.181410 226 3 0.149207 152 4 0.057842 422 4 0.3984084 198 2 0.218962 276 5 0.061914 0.037917 0.095780 0.083132 0.042156 0.191841 0.036014 0.041900 0.028216 0.051460 0.050058 0.119246 0.015987 0.061978 0.054561 0.0407167 0.0083087 0.046832 0.0000000 0.026669 0.125555 0.105122 0.026837 0.0131596 0.037047 0.0162639 0.0419455 0.014954 0.021195 0.0282237 0.0316372 0.014731 0.024548 0.000000 0.000000 0.042024 0.1164695 0.2845611 0.058271 0.113095 0.024555 0.1594153 0.112489 2 0.067020 0.034393 0.03039421 5 0.065633 0.036984 0.0286491 0.01702008 9.9994e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.11228592 0.9988667 insignificant 1.00000 1.0000 insignificant 0.02155913 0.42731723 lowCoverage 1.00000 lowCoverage 0.067038 0.1259640 -0.055784 5 0.078759 0.169883 -0.091124 9.4813e-01 4.2666e-06 weaklyHypometh 1.0000e+00 7.1111e-04 weaklyHypometh 5.2446e-01 4.5575e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0504378 3.8007e-01 lowCoverage 1.0000e+00 lowCoverage 0.067038 0.083987 -0.023571 4 0.078759 0.159278 -0.0805189 9.9626e-01 4.0303e-05 lowCoverage 1.0000e+00 0.0134343 lowCoverage 9.9998e-01 1.1694e-04 lowCoverage 1.0000e+00 5.8471e-02 lowCoverage -0.1199082 9.8761e-02 lowCoverage 1.0000000 lowCoverage 0.034447 0.1259640 -0.0924622 5 0.044380 0.169883 -0.1255026 9.9884e-01 4.2130e-06 weaklyHypometh 1.0000e+00 1.1653e-03 weaklyHypometh 6.3203e-01 3.1009e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0719969 2.3401e-01 lowCoverage 1.0000e+00 lowCoverage 0.034447 0.083987 -0.0610106 4 0.044380 0.159278 -0.1148978 1.0000e+00 1.1475e-08 lowCoverage 1.0000e+00 5.7374e-06 lowCoverage 1.0000e+00 1.0965e-05 lowCoverage 1.0000e+00 3.6551e-03 lowCoverage -0.1414674 6.2878e-02 lowCoverage 1.000000 lowCoverage 0.1259640 0.083987 0.02574175 4 0.169883 0.159278 0.0106048 2.7014e-01 4.7265e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2841e-01 2.8857e-02 lowCoverage 1.0000e+00 8.0158e-01 lowCoverage -0.069470 3.8356e-01 lowCoverage 1.00000000 lowCoverage chr16 52548112 52549112 137597 FTO ENSG00000140718 0.471153 200 5 0.646931 79 5 0.580266 112 5 0.582332 129 5 0.472222 56 5 0.714327 81 3 0.697722 82 6 0.757206 43 3 0.585172 55 3 0.665455 40 3 0.828125 100 5 0.496970 27 3 0.617971 46 5 0.538776 49 5 0.660272 67 5 0.416667 18 1 0.488571 123 3 0.569893 134 5 0.764966 43 4 0.702857 50 5 0.666667 23 1 0.666667 4 0 0.707223 126 5 0.7023810 27 1 0.333333 30 1 0.832020 80 5 0.471429 27 1 0.5231481 26 2 0.574405 62 3 0.7327160 79 6 0.8019091 61 2 0.6829365 80 5 0.7069444 68 4 0.519577 43 5 0.768155 62 5 0.462963 13 1 0.580137 58 5 0.834195 56 3 0.630286 249 5 0.576599 204 5 0.677251 130 5 0.6215282 149 5 0.625638 185 5 0.722724 0.734894 0.656879 0.750744 0.602124 0.814256 0.713773 0.738799 0.812500 0.812834 0.823284 0.642157 0.765445 0.744258 0.787333 0.6013072 0.7044818 0.671136 0.8334500 0.835574 0.733660 0.676988 0.713122 0.7442810 0.690216 0.8055298 0.6337535 0.758715 0.755602 0.7627088 0.8386328 0.796588 0.734886 0.754653 0.750715 0.689105 0.5456925 0.7236027 0.748162 0.732076 0.777264 0.7844920 0.696364 1 0.689295 0.731200 -0.02680757 5 0.612284 0.764242 -0.1519587 0.96022173 2.0491e-01 insignificant 1.00000 1.000000 insignificant 0.92889562 0.2328635 insignificant 1.00000 1.0000 insignificant -0.02834347 0.56353747 lowCoverage 1.00000 lowCoverage 0.689700 0.7166667 0.033876 3 0.647531 0.781738 -0.134207 1.8826e-01 1.5371e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.0638e-01 3.3943e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0324359 6.3343e-01 lowCoverage 1.0000e+00 lowCoverage 0.688482 0.635769 -0.003684 5 0.569204 0.661839 -0.0926351 5.5954e-01 7.4847e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.2502e-01 5.2824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0133676 6.5783e-01 lowCoverage 1.0000000 lowCoverage 0.731200 0.7157191 0.0491088 3 0.764242 0.759911 0.0043309 1.5971e-01 5.9220e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.2574e-01 7.8908e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0040924 9.5626e-01 lowCoverage 1.0000e+00 lowCoverage 0.731511 0.635769 0.0221808 5 0.775084 0.661839 0.1132449 3.0356e-01 9.9845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3202e-01 9.9648e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0149758 7.3967e-01 lowCoverage 1.000000 lowCoverage 0.7138047 0.635769 -0.04571012 3 0.733235 0.661839 0.0713957 6.3457e-01 4.4801e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2944e-01 3.2915e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.019068 7.6955e-01 lowCoverage 1.00000000 lowCoverage chr16 52655422 52656422 137646 FTO ENSG00000140718 0.935990 254 5 0.914066 82 5 0.870472 103 5 0.929400 342 5 0.955556 42 5 0.909834 221 5 0.933333 83 5 0.896751 73 5 0.895001 187 5 0.978363 79 5 0.925810 123 5 0.917483 60 5 0.927144 122 5 0.937778 32 5 0.921372 118 5 1.000000 55 5 0.920750 72 5 0.870822 338 5 0.952778 56 5 0.912251 172 5 0.840000 32 4 0.824242 102 5 0.923810 112 5 0.8510256 58 5 0.927778 60 5 0.915188 115 5 0.811746 39 5 0.8500000 33 2 0.955556 64 5 0.9484420 93 5 0.9675000 88 5 0.9427913 192 5 0.6911304 123 5 0.875000 38 5 NA 0 0 0.866667 9 0 0.878425 150 5 0.859077 112 5 0.890621 367 5 0.849296 214 5 0.927806 401 5 0.7942574 255 5 0.858979 290 5 0.941900 0.897223 0.858891 0.925431 0.946128 0.912769 0.922475 0.872972 0.884118 0.972178 0.928181 0.919093 0.934878 0.938182 0.925691 1.0000000 0.9362285 0.865797 0.9496212 0.904402 0.838788 0.827946 0.921116 0.8598291 0.931229 0.9189793 0.8096681 0.878788 0.939394 0.9464196 0.9625000 0.939478 0.679188 0.868182 NA 0.828283 0.8894853 0.8678594 0.886728 0.860661 0.925797 0.7944788 0.861115 5 0.912395 0.908907 0.00397026 5 0.916294 0.908014 0.0082796 0.20612353 7.2960e-01 insignificant 1.00000 1.000000 insignificant 0.09409017 0.9305568 insignificant 1.00000 1.0000 insignificant 0.02874106 0.12687213 lowCoverage 1.00000 lowCoverage 0.912395 0.8240741 0.090385 5 0.916294 0.820493 0.095801 3.8593e-06 9.8375e-01 weaklyHypermeth 9.4130e-05 1.0000e+00 weaklyHypermeth 8.9468e-02 9.6214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0911877 6.2762e-02 lowCoverage 1.0000e+00 lowCoverage 0.912395 0.872954 0.038923 5 0.916294 0.874440 0.0418537 1.8653e-03 9.9605e-01 weaklyHypermeth 4.3380e-02 1.0000000 weaklyHypermeth 1.5054e-03 9.9921e-01 weaklyHypermeth 5.3763e-02 1.0000e+00 weaklyHypermeth 0.0610558 4.8807e-02 weaklyHypermeth 1.0000000 insignificant 0.908907 0.8240741 0.0835697 5 0.908014 0.820493 0.0875213 1.2376e-03 7.7245e-01 weaklyHypermeth 2.2919e-02 1.0000e+00 weaklyHypermeth 1.9139e-01 6.6193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0624467 1.6662e-01 lowCoverage 1.0000e+00 lowCoverage 0.908907 0.872954 0.0352984 5 0.908014 0.874440 0.0335741 1.0903e-01 9.8462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9807e-02 9.9626e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0323147 2.7306e-01 lowCoverage 1.000000 lowCoverage 0.8240741 0.872954 -0.05079300 5 0.820493 0.874440 -0.0539472 3.4908e-01 1.2519e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5169e-01 7.1016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.030132 4.9958e-01 lowCoverage 1.00000000 lowCoverage chr16 52701283 52702283 137675 FTO ENSG00000140718 0.926987 244 5 0.906250 121 5 0.831852 140 7 0.994805 104 4 0.680322 68 4 0.906996 208 7 0.952636 94 5 0.944043 119 5 0.745886 108 5 0.964264 88 5 0.930907 131 5 0.817857 38 3 0.954062 120 5 NA 0 0 0.887832 75 5 0.890219 37 3 0.881643 50 3 0.917636 91 2 0.978479 83 3 0.894677 216 8 0.971429 48 4 0.916667 16 1 0.911282 87 4 0.9597778 77 5 0.958333 11 1 0.955069 104 5 0.878002 66 5 0.9871795 47 4 0.880154 94 3 0.9617388 123 5 0.9814815 67 2 0.9202587 289 8 0.6274621 190 5 0.431111 73 3 0.765895 337 4 0.111111 6 0 0.691503 59 3 0.512099 195 5 0.955226 163 4 0.842897 182 4 0.854722 147 4 0.8822459 136 4 0.906656 100 4 0.900604 0.899526 0.818809 0.999327 0.804161 0.905466 0.872549 0.959235 0.817473 0.936103 0.895995 0.929563 0.941263 NA 0.932958 0.9335776 0.7646991 0.922399 0.9681439 0.912102 0.996296 0.994968 0.902398 0.9766461 0.925619 0.9690860 0.9188907 0.984330 0.910355 0.9520715 0.9979424 0.933985 0.628227 0.553086 0.718404 0.455716 0.8155410 0.5752670 0.921356 0.850895 0.834310 0.8315151 0.908399 0 0.900234 0.934888 -0.03569654 5 0.904992 0.920169 -0.0151778 0.91445081 1.9664e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.97814994 0.0131186 weaklyHypometh 1.00000 1.0000 insignificant -0.04499058 0.04243616 lowCoverage 1.00000 lowCoverage 0.900234 0.4976744 0.321334 5 0.904992 0.630111 0.274881 4.6390e-26 9.9158e-01 hypermethylated 6.6271e-24 1.0000e+00 hypermethylated 4.9649e-08 9.7552e-01 hypermethylated 7.0927e-06 1.0000e+00 hypermethylated 0.3719269 1.1001e-02 lowCoverage 2.5685e-01 lowCoverage 0.900234 0.831044 0.046026 4 0.904992 0.895252 0.0097396 1.2532e-01 4.8562e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.4570e-01 6.9833e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0067747 8.0658e-01 lowCoverage 1.0000000 lowCoverage 0.934888 0.4976744 0.3023902 5 0.920169 0.630111 0.2900588 6.2036e-21 7.9590e-01 hypermethylated 1.2407e-18 1.0000e+00 hypermethylated 3.1385e-07 9.9356e-01 hypermethylated 4.4835e-05 1.0000e+00 hypermethylated 0.4169175 7.1811e-03 lowCoverage 1.8898e-01 lowCoverage 0.934888 0.831044 0.0948367 4 0.920169 0.895252 0.0249174 1.0500e-03 8.6692e-01 lowCoverage 3.0883e-02 1.0000e+00 lowCoverage 3.3598e-02 9.4682e-01 lowCoverage 7.8941e-01 1.0000e+00 lowCoverage 0.0517652 6.0390e-02 lowCoverage 1.000000 lowCoverage 0.4976744 0.831044 -0.31777466 4 0.630111 0.895252 -0.2651414 7.6558e-01 3.3948e-10 lowCoverage 1.0000e+00 5.6580e-08 lowCoverage 9.4134e-01 1.1669e-04 lowCoverage 1.0000e+00 1.6669e-02 lowCoverage -0.365152 1.1757e-02 lowCoverage 0.41989939 lowCoverage chr16 52735342 52736342 137683 FTO ENSG00000140718 0.750319 277 9 0.735906 245 9 0.701997 229 9 0.800787 141 7 0.817664 79 5 0.808986 263 8 0.713547 141 7 0.727333 254 9 0.775070 193 9 0.860789 157 8 0.767654 246 9 0.865741 72 4 0.669348 250 9 0.750000 24 2 0.780476 137 9 0.622068 90 8 0.516715 86 5 0.616997 203 7 0.768249 164 9 0.778204 288 9 0.972222 87 5 0.712774 97 7 0.739077 159 8 0.9645191 77 8 0.753333 52 7 0.870059 296 9 0.736236 102 7 0.8833333 57 3 0.767992 181 8 0.8345894 379 9 0.8060653 323 9 0.8249512 274 9 0.7070737 188 7 0.784278 191 9 0.604167 137 7 0.678030 35 3 0.689175 97 7 0.513356 306 9 0.690948 372 9 0.715692 281 9 0.567314 271 7 0.6406987 240 8 0.596130 213 7 0.851190 0.812800 0.736265 0.874368 0.868450 0.855039 0.817094 0.826667 0.824408 0.892570 0.878496 0.921377 0.809888 0.852337 0.906460 0.7940882 0.6821491 0.718725 0.8187660 0.883271 0.982609 0.790974 0.828648 0.9546584 0.859614 0.9241331 0.8180777 0.921093 0.835024 0.9026403 0.8896101 0.905451 0.762845 0.699510 0.623762 0.617274 0.7924244 0.5247270 0.810311 0.847256 0.781671 0.7822677 0.655670 3 0.786945 0.862764 -0.06466045 9 0.762320 0.804184 -0.0418644 0.99991573 1.5810e-05 weaklyHypometh 1.00000 0.015810 weaklyHypometh 0.99998559 0.0004298 weaklyHypometh 1.00000 0.4298 insignificant -0.08070352 0.01740641 weaklyHypometh 1.00000 insignificant 0.786945 0.6844864 0.143492 7 0.762320 0.625225 0.137094 1.7288e-05 6.4059e-02 weaklyHypermeth 3.6783e-04 1.0000e+00 weaklyHypermeth 1.8857e-03 2.8614e-01 weaklyHypermeth 4.2735e-02 1.0000e+00 weaklyHypermeth 0.0787127 1.0285e-01 insignificant 1.0000e+00 insignificant 0.786885 0.634713 0.047443 8 0.735911 0.675547 0.0603635 5.5986e-03 9.4620e-01 weaklyHypermeth 1.2171e-01 1.0000000 insignificant 9.4694e-04 9.9046e-01 weaklyHypermeth 3.7877e-02 1.0000e+00 weaklyHypermeth 0.0992360 1.8072e-02 weaklyHypermeth 0.4884248 insignificant 0.862764 0.6844864 0.2044413 7 0.804184 0.625225 0.1789588 1.6403e-07 9.5865e-01 hypermethylated 6.0752e-06 1.0000e+00 hypermethylated 1.4948e-04 9.3084e-01 hypermethylated 7.3388e-03 1.0000e+00 hypermethylated 0.1594162 6.2274e-03 weaklyHypermeth 1.7792e-01 insignificant 0.863330 0.634713 0.1101521 8 0.819464 0.675547 0.1439165 2.2854e-08 1.0000e+00 weaklyHypermeth 1.7580e-06 1.0000e+00 weaklyHypermeth 4.0859e-06 9.9999e-01 weaklyHypermeth 8.1718e-04 1.0000e+00 weaklyHypermeth 0.1799395 6.1510e-04 weaklyHypermeth 0.067135 weaklyHypermeth 0.6873684 0.634713 -0.11372307 6 0.694695 0.675547 0.0191474 6.4090e-04 1.0639e-01 inconclusive 4.2727e-02 1.0000e+00 inconclusive 1.9292e-02 2.6842e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.020523 6.7395e-01 insignificant 1.00000000 insignificant chr16 52767048 52768048 137692 FTO ENSG00000140718 0.390977 54 3 0.379400 233 7 0.330769 69 5 0.428407 92 7 0.394021 94 6 0.628030 75 3 0.367460 70 7 0.462662 74 7 0.259524 40 6 0.583333 10 0 0.473470 155 7 0.444444 14 0 0.857143 9 0 0.428571 13 0 0.523810 14 0 0.500000 2 0 NA 0 0 0.819444 13 1 0.928571 14 2 0.367965 36 3 0.342857 35 6 0.600000 6 0 0.360893 40 3 0.3333333 48 5 0.873188 50 2 0.476984 107 7 0.333333 24 3 0.4000000 5 1 0.746032 17 2 0.4777328 127 7 0.4938645 113 3 0.4848739 77 3 0.1317254 62 3 0.000000 14 1 0.314465 108 2 0.166667 26 3 0.313056 109 3 0.309908 78 3 0.390433 90 7 0.385289 128 7 0.328923 198 7 0.1333333 7 0 0.266350 140 7 0.745614 0.656177 1.000000 0.944061 0.849206 0.837374 0.783333 0.897727 0.666667 0.908911 0.840875 0.908911 1.000000 1.000000 0.888889 0.7777886 NA 0.788540 0.8612915 0.858586 0.666667 0.932892 0.842084 0.8333333 0.873188 0.8796296 0.7777778 0.732892 0.746032 0.8924876 0.9023504 0.808123 0.307359 0.000000 0.314465 0.388889 0.2860195 0.2231183 0.522121 0.713095 0.719869 0.6385402 0.554817 0 0.510242 0.712519 -0.03935107 3 0.347084 0.378311 -0.0312264 0.97720209 1.4920e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.51034811 0.9405206 lowCoverage 1.00000 1.0000 lowCoverage 0.00998815 0.87895162 lowCoverage 1.00000 lowCoverage 0.510718 0.3198992 0.417429 3 0.396668 0.253030 0.143638 3.3585e-14 6.2811e-02 lowCoverage 1.8659e-12 1.0000e+00 lowCoverage 5.6642e-07 9.0915e-01 lowCoverage 4.7202e-05 1.0000e+00 lowCoverage 0.2976090 8.4687e-04 lowCoverage 5.0083e-02 lowCoverage 0.510718 0.470693 0.099820 7 0.396668 0.335584 0.0610837 1.9038e-05 8.8904e-01 weaklyHypermeth 6.3459e-04 1.0000000 weaklyHypermeth 1.0866e-03 9.9107e-01 weaklyHypermeth 4.1791e-02 1.0000e+00 weaklyHypermeth 0.2027134 8.4236e-03 lowCoverage 0.2503857 lowCoverage 0.713622 0.3198992 0.4801896 3 0.432355 0.253030 0.1793256 4.0805e-11 3.5163e-01 lowCoverage 2.1476e-09 1.0000e+00 lowCoverage 9.1622e-06 8.6174e-01 lowCoverage 7.6352e-04 1.0000e+00 lowCoverage 0.2876208 1.5522e-03 lowCoverage 8.1692e-02 lowCoverage 0.713622 0.470693 0.1824499 3 0.432355 0.335584 0.0967710 3.1375e-05 9.8813e-01 lowCoverage 1.1205e-03 1.0000e+00 lowCoverage 2.0597e-02 9.6508e-01 lowCoverage 5.7214e-01 1.0000e+00 lowCoverage 0.1927253 1.5460e-02 lowCoverage 0.589225 lowCoverage 0.3198992 0.470693 -0.27944727 3 0.253030 0.335584 -0.0825546 4.6377e-01 1.1002e-03 lowCoverage 1.0000e+00 4.0129e-02 lowCoverage 9.0887e-01 6.7657e-03 lowCoverage 1.0000e+00 3.0753e-01 lowCoverage -0.094896 2.1429e-01 lowCoverage 1.00000000 lowCoverage chr16 52807715 52808715 137699 FTO ENSG00000140718 0.876068 129 4 0.848096 127 6 0.828291 115 6 0.924242 72 2 0.887500 65 6 0.884060 193 6 0.815134 82 6 0.760470 119 6 0.813209 101 6 0.888611 92 6 0.902815 158 6 0.740278 47 5 0.951282 132 6 NA 0 0 0.920966 75 4 0.855556 36 3 0.875089 49 5 0.922024 91 3 0.918142 82 6 0.878975 197 6 0.883333 58 5 0.833333 55 5 0.874596 106 6 0.8681818 62 5 0.898148 24 3 0.922015 136 5 0.791896 86 6 0.8948718 35 4 0.949743 96 4 0.8950844 164 6 0.8481990 166 5 0.8988569 269 6 0.3559391 170 6 0.296154 82 3 0.000000 100 4 0.297222 25 1 0.329167 84 6 0.555365 165 6 0.926918 138 6 0.942517 128 4 0.904605 102 6 0.9382310 95 6 0.895706 102 4 0.872581 0.826395 0.763877 0.845720 0.888382 0.849759 0.797316 0.810904 0.749222 0.892019 0.884529 0.786496 0.923919 NA 0.883704 0.7649635 0.8642609 0.905240 0.9043987 0.854908 0.948905 0.823068 0.848552 0.9114134 0.930251 0.9127476 0.8161060 0.884896 0.924827 0.8614725 0.8712534 0.889986 0.219213 0.160022 0.089234 0.351825 0.1947689 0.5756839 0.905124 0.908312 0.876569 0.9271033 0.902868 2 0.856779 0.888624 -0.03313964 6 0.868969 0.889548 -0.0205789 0.89112744 3.8962e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.80618212 0.1557684 insignificant 1.00000 1.0000 insignificant -0.01191772 0.50316845 lowCoverage 1.00000 lowCoverage 0.856779 0.3226837 0.549509 6 0.868969 0.366337 0.502633 3.6902e-37 1.0000e+00 hypermethylated 1.2301e-34 1.0000e+00 hypermethylated 2.3174e-12 1.0000e+00 hypermethylated 7.7246e-10 1.0000e+00 hypermethylated 0.5622961 4.7395e-04 lowCoverage 3.9496e-02 lowCoverage 0.856779 0.900885 -0.048676 5 0.868969 0.921478 -0.0525084 9.6392e-01 2.9571e-03 weaklyHypometh 1.0000e+00 0.4738779 insignificant 9.6065e-01 4.0931e-03 weaklyHypometh 1.0000e+00 5.1163e-01 insignificant -0.0536581 3.1081e-03 lowCoverage 0.1158676 lowCoverage 0.888624 0.3226837 0.5767243 6 0.889548 0.366337 0.5232116 3.6186e-29 1.0000e+00 hypermethylated 1.8093e-26 1.0000e+00 hypermethylated 1.0591e-10 1.0000e+00 hypermethylated 3.5304e-08 1.0000e+00 hypermethylated 0.5742138 4.3969e-04 lowCoverage 3.3822e-02 lowCoverage 0.888624 0.900885 -0.0133374 5 0.889548 0.921478 -0.0319295 8.5140e-01 2.5694e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.4162e-01 2.5788e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0417404 1.5105e-02 weaklyHypometh 0.589225 insignificant 0.3226837 0.900885 -0.61786648 5 0.366337 0.921478 -0.5551411 1.0000e+00 3.5968e-17 hypomethylated 1.0000e+00 1.7984e-14 hypomethylated 1.0000e+00 3.7035e-09 hypomethylated 1.0000e+00 1.8517e-06 hypomethylated -0.615954 3.3699e-04 lowCoverage 0.03565341 lowCoverage chr16 52972781 52973781 137716 IRX3 ENSG00000177508 0.957071 71 5 0.729481 119 5 0.859091 37 2 0.992593 71 3 0.728175 61 5 0.942810 133 6 0.711538 41 4 0.780948 90 4 0.821299 55 5 0.713420 69 5 0.900505 156 5 0.675992 41 5 0.951462 111 5 0.896825 40 3 0.613368 78 5 0.768707 24 1 0.500000 16 2 0.935368 64 4 0.930741 129 5 0.864417 109 5 0.784848 32 3 0.515556 42 3 0.863450 75 5 0.9152015 72 5 0.937500 13 0 0.912790 110 5 0.784512 81 5 0.7166667 36 3 0.873571 80 5 0.9615047 169 5 0.9579581 122 5 0.9334230 149 5 0.5631951 151 5 0.834459 79 3 0.756159 162 4 0.250000 10 1 0.670996 80 6 0.265010 134 5 0.910791 54 4 0.893903 71 5 0.828869 79 3 0.9252747 43 3 0.935238 74 3 0.967554 0.920459 0.730257 0.979050 0.923040 0.900178 0.815592 0.873445 0.866588 0.891460 0.902143 0.763829 0.983945 0.863560 0.879826 0.8215488 0.8419126 0.883976 0.9338207 0.858254 0.908173 0.823265 0.933865 0.9545714 0.849101 0.9225370 0.8189070 0.816162 0.848785 0.9438826 0.9729330 0.909945 0.280556 0.706983 0.630579 0.256769 0.6284053 0.0987097 0.936286 0.830871 0.891174 0.8463758 0.893795 1 0.881848 0.900102 -0.02042877 5 0.723653 0.814177 -0.0905242 0.84787407 1.8972e-01 insignificant 1.00000 1.000000 insignificant 0.86960603 0.3842272 insignificant 1.00000 1.0000 insignificant -0.03272446 0.49965032 lowCoverage 1.00000 lowCoverage 0.881848 0.4853896 0.390593 5 0.723653 0.514474 0.209179 4.0965e-16 9.9779e-01 hypermethylated 2.9261e-14 1.0000e+00 hypermethylated 1.6724e-04 9.7299e-01 hypermethylated 6.6896e-03 1.0000e+00 hypermethylated 0.2570540 5.1967e-02 lowCoverage 9.4485e-01 lowCoverage 0.883014 0.884735 0.012025 3 0.844262 0.881400 -0.0371379 2.6460e-01 6.1384e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.3935e-01 8.3871e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0851245 2.4081e-02 lowCoverage 0.6337057 lowCoverage 0.900102 0.4853896 0.4102497 5 0.814177 0.514474 0.2997033 1.0608e-11 9.8760e-01 hypermethylated 7.0719e-10 1.0000e+00 hypermethylated 3.1041e-04 9.6903e-01 hypermethylated 1.1086e-02 1.0000e+00 hypermethylated 0.2897785 3.4425e-02 lowCoverage 6.6770e-01 lowCoverage 0.900919 0.884735 0.0240897 3 0.866540 0.881400 -0.0148597 3.8362e-01 5.7021e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.9510e-01 1.1002e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0524001 2.3130e-01 lowCoverage 1.000000 lowCoverage 0.4861789 0.884735 -0.43479122 3 0.600220 0.881400 -0.2811802 9.9595e-01 1.2086e-06 lowCoverage 1.0000e+00 9.2972e-05 lowCoverage 9.9859e-01 6.5371e-04 lowCoverage 1.0000e+00 5.3952e-02 lowCoverage -0.342179 1.9157e-02 lowCoverage 0.56343724 lowCoverage chr16 53023213 53024213 137728 IRX3 ENSG00000177508 0.785731 190 9 0.835804 238 9 0.739891 183 10 0.859808 159 5 0.928290 79 8 0.928108 211 9 0.672028 91 5 0.826027 187 10 0.906902 133 10 0.942842 131 10 0.894182 324 10 0.895833 31 2 0.901173 215 10 0.839941 73 5 0.826091 156 10 0.952381 30 3 0.811111 39 6 0.531896 190 6 0.927441 259 9 0.855426 152 9 0.837486 86 8 0.261654 79 4 0.829290 149 9 0.8062600 129 9 0.601648 63 4 0.910303 225 10 0.627706 87 7 0.7281746 48 5 0.841919 163 9 0.9078464 287 10 0.8910906 225 10 0.9608265 270 10 0.8836379 197 10 0.861563 156 9 1.000000 297 7 0.480000 11 1 0.833859 144 10 0.777394 266 9 0.370919 237 6 0.298664 191 8 0.535785 163 5 0.3229088 108 7 0.314407 159 5 0.716878 0.792751 0.678547 0.825871 0.939581 0.882160 0.694468 0.881503 0.837513 0.891186 0.873173 0.744210 0.850235 0.783848 0.748529 0.8631315 0.7007875 0.536984 0.9177404 0.822273 0.905338 0.374348 0.812569 0.7124705 0.712844 0.8513041 0.6789791 0.785995 0.764553 0.8589820 0.8540591 0.961224 0.868723 0.856442 0.964428 0.669186 0.9394355 0.7355669 0.245935 0.259557 0.347093 0.2903989 0.252147 2 0.821556 0.816620 0.00611352 9 0.809556 0.761244 0.0483122 0.21689111 6.5106e-01 insignificant 1.00000 1.000000 insignificant 0.22722384 0.9782367 insignificant 1.00000 1.0000 insignificant 0.07602833 0.22785476 insignificant 1.00000 insignificant 0.821498 0.8832866 -0.044976 9 0.793686 0.814217 -0.020531 5.1863e-01 4.3776e-03 weaklyHypometh 1.0000e+00 4.8640e-01 insignificant 7.2868e-01 8.1312e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0369695 6.4094e-01 insignificant 1.0000e+00 insignificant 0.819277 0.230769 0.548705 8 0.845748 0.342208 0.5035396 9.2057e-51 1.0000e+00 hypermethylated 9.2057e-48 1.0000000 hypermethylated 2.0349e-14 1.0000e+00 hypermethylated 1.0174e-11 1.0000e+00 hypermethylated 0.4745086 4.7286e-05 hypermethylated 0.0073598 hypermethylated 0.817222 0.8832866 -0.0529786 9 0.774681 0.814217 -0.0395356 5.8148e-01 2.3730e-03 weaklyHypometh 1.0000e+00 2.6367e-01 insignificant 8.3106e-01 2.1828e-03 weaklyHypometh 1.0000e+00 3.2166e-01 insignificant -0.0390588 6.7604e-01 insignificant 1.0000e+00 insignificant 0.818807 0.230769 0.5402271 8 0.849816 0.342208 0.5076080 9.0307e-34 1.0000e+00 hypermethylated 9.0307e-31 1.0000e+00 hypermethylated 2.1577e-12 1.0000e+00 hypermethylated 1.0789e-09 1.0000e+00 hypermethylated 0.3984803 6.0874e-05 hypermethylated 0.015218 hypermethylated 0.8865179 0.230769 0.59536094 8 0.883868 0.342208 0.5416596 1.0509e-29 9.9875e-01 hypermethylated 1.0509e-26 1.0000e+00 hypermethylated 2.6971e-09 9.9867e-01 hypermethylated 2.6971e-06 1.0000e+00 hypermethylated 0.437539 8.1081e-04 hypermethylated 0.06016298 hypermethylated chr16 53028394 53029394 137729 IRX3 ENSG00000177508 0.898811 233 7 0.929902 192 7 0.745226 115 7 0.920799 248 5 0.930159 78 6 0.859979 249 7 0.826772 86 6 0.905993 160 7 0.908605 151 7 0.906034 144 7 0.929049 262 7 0.817965 74 6 0.897426 249 7 0.780000 51 3 0.910931 131 7 0.826984 46 5 0.696078 61 3 0.735037 298 7 0.945330 115 5 0.903093 226 7 0.876623 56 4 0.508151 131 5 0.842741 178 7 0.7777778 91 6 0.929108 76 5 0.944977 246 7 0.825662 116 7 0.8561914 55 5 0.913917 219 5 0.9217696 280 7 0.9142162 273 7 0.9345015 336 7 0.8389709 214 7 0.648329 119 5 0.888889 9 1 0.782483 49 4 0.853938 48 4 0.791737 320 7 0.735946 174 6 0.511557 297 5 0.522663 359 6 0.6967110 210 5 0.775834 201 6 0.851798 0.915912 0.747240 0.848085 0.941776 0.876455 0.801597 0.897074 0.903455 0.894579 0.937851 0.719400 0.901588 0.661207 0.885528 0.7514161 0.7249375 0.803154 0.9580600 0.907040 0.869430 0.523924 0.782346 0.8857571 0.895806 0.9438962 0.8287209 0.789805 0.939801 0.9334624 0.9387392 0.935215 0.844171 0.778786 NA 0.840575 0.8242678 0.7611947 0.713869 0.469089 0.463400 0.6554147 0.806184 3 0.867151 0.882839 -0.01568425 7 0.875081 0.872969 0.0021118 0.31847090 3.0230e-01 insignificant 1.00000 1.000000 insignificant 0.64135749 0.1652108 insignificant 1.00000 1.0000 insignificant 0.00990563 0.80019603 insignificant 1.00000 insignificant 0.867151 0.7905138 0.076091 7 0.875081 0.785884 0.089197 4.6796e-04 9.9990e-01 weaklyHypermeth 8.5430e-03 1.0000e+00 weaklyHypermeth 5.9551e-02 9.8518e-01 insignificant 9.3048e-01 1.0000e+00 insignificant 0.0629843 1.4129e-01 lowCoverage 1.0000e+00 lowCoverage 0.867151 0.565673 0.297995 7 0.875081 0.606077 0.2690039 6.1317e-24 1.0000e+00 hypermethylated 1.5329e-21 1.0000000 hypermethylated 1.1616e-07 1.0000e+00 hypermethylated 1.7526e-05 1.0000e+00 hypermethylated 0.2151662 1.4773e-02 weaklyHypermeth 0.4103526 insignificant 0.882839 0.7905138 0.0925168 7 0.872969 0.785884 0.0870854 5.0971e-03 9.8967e-01 weaklyHypermeth 8.7882e-02 1.0000e+00 weaklyHypermeth 6.3590e-02 9.9739e-01 insignificant 9.9359e-01 1.0000e+00 insignificant 0.0530787 2.9670e-01 lowCoverage 1.0000e+00 lowCoverage 0.882839 0.565673 0.3231613 7 0.872969 0.606077 0.2668921 3.3778e-15 9.9876e-01 hypermethylated 8.4445e-13 1.0000e+00 hypermethylated 1.4939e-05 9.9943e-01 hypermethylated 1.6599e-03 1.0000e+00 hypermethylated 0.2052606 1.5061e-02 weaklyHypermeth 0.589225 insignificant 0.7905138 0.565673 0.22077080 7 0.785884 0.606077 0.1798067 1.0703e-04 9.9808e-01 hypermethylated 9.7302e-03 1.0000e+00 hypermethylated 5.9145e-03 9.6830e-01 weaklyHypermeth 5.1704e-01 1.0000e+00 insignificant 0.152182 5.2347e-02 lowCoverage 1.00000000 lowCoverage chr16 53038748 53039748 137730 IRX3 ENSG00000177508 0.884811 193 4 0.799246 200 5 0.493382 54 3 0.911669 249 5 0.929398 44 4 0.942713 259 4 0.658571 55 4 0.799074 92 4 0.761979 101 4 0.898338 86 4 0.734697 153 5 0.881965 54 3 0.816568 106 4 0.888198 46 3 0.855699 101 3 0.855556 26 3 0.557143 23 3 0.548257 198 4 0.879464 55 3 0.915625 200 4 0.514286 27 4 0.572466 84 3 0.923214 108 4 0.9453968 57 4 0.836508 73 4 0.876033 160 5 0.735386 72 4 0.7197802 54 3 0.865351 85 4 0.7779158 198 5 0.9326979 151 5 0.9624734 145 4 0.6646786 127 5 0.511000 75 4 1.000000 131 2 0.503535 81 5 0.813160 135 5 0.220342 159 4 0.722416 252 4 0.596364 185 5 0.797444 339 4 0.7479566 133 4 0.663647 216 5 0.841663 0.705157 0.584895 0.851440 0.857088 0.895317 0.858493 0.941463 0.749327 0.883398 0.877289 0.845666 0.776403 0.828641 0.820279 0.7513113 0.5934715 0.504072 0.8743104 0.886550 0.749129 0.606919 0.883983 0.9156020 0.734204 0.8004221 0.8682176 0.813053 0.785863 0.9055825 0.8758490 0.939979 0.565394 0.544360 0.831420 0.424289 0.8241079 0.3163218 0.738646 0.682665 0.745915 0.6896700 0.672416 3 0.817865 0.866557 -0.03474886 4 0.836477 0.805038 0.0314389 0.87648683 1.5554e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.86486801 0.3342821 lowCoverage 1.00000 1.0000 lowCoverage -0.00450809 0.93172829 lowCoverage 1.00000 lowCoverage 0.817786 0.6497175 0.191544 4 0.809223 0.613448 0.195775 5.4180e-06 7.6951e-01 lowCoverage 1.2600e-04 1.0000e+00 lowCoverage 1.3312e-03 8.2607e-01 lowCoverage 3.4646e-02 1.0000e+00 lowCoverage 0.1818316 1.6677e-01 lowCoverage 1.0000e+00 lowCoverage 0.818301 0.697778 0.117280 4 0.831068 0.692748 0.1383204 7.0690e-06 9.9765e-01 lowCoverage 2.8276e-04 1.0000000 lowCoverage 2.1222e-03 9.9994e-01 lowCoverage 7.3179e-02 1.0000e+00 lowCoverage 0.0950520 6.3776e-02 lowCoverage 1.0000000 lowCoverage 0.866722 0.6497175 0.2242258 4 0.800322 0.613448 0.1868744 2.8118e-06 9.1673e-01 lowCoverage 8.2700e-05 1.0000e+00 lowCoverage 2.6938e-04 8.9760e-01 lowCoverage 1.1086e-02 1.0000e+00 lowCoverage 0.1863397 1.6365e-01 lowCoverage 1.0000e+00 lowCoverage 0.869276 0.697778 0.1733157 4 0.874673 0.692748 0.1819250 1.1458e-07 9.9996e-01 lowCoverage 7.5939e-06 1.0000e+00 lowCoverage 6.7232e-05 1.0000e+00 lowCoverage 4.4822e-03 1.0000e+00 lowCoverage 0.0995600 9.0934e-02 lowCoverage 1.000000 lowCoverage 0.6501416 0.697778 -0.04515079 5 0.636138 0.692748 -0.0566101 1.2767e-01 3.1872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1015e-01 1.2686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.086780 4.8364e-01 lowCoverage 1.00000000 lowCoverage chr16 53408839 53409839 137835 IRX3 ENSG00000177508 0.737007 748 9 0.731761 303 9 0.696630 194 9 0.704433 474 9 0.806052 109 9 0.759514 566 9 0.847264 254 9 0.730416 157 9 0.673903 151 9 0.834881 139 7 0.787281 337 9 0.812215 200 9 0.669615 194 7 1.000000 2 0 0.761181 193 7 0.816089 201 9 0.802886 572 9 0.682585 550 9 0.812936 128 9 0.752039 468 9 0.587326 65 7 0.565966 131 6 0.702795 295 9 0.6033382 134 8 0.708632 97 8 0.672788 494 9 0.664903 108 9 0.6578743 61 6 0.682923 166 9 0.6188392 438 9 0.6520768 403 9 0.8195799 480 9 0.4147540 287 9 0.351902 200 9 0.689078 295 9 0.376455 94 8 0.424117 281 9 0.476613 407 9 0.636413 817 9 0.588384 484 9 0.553681 1249 9 0.5632864 418 8 0.631786 606 9 0.715789 0.739632 0.720407 0.690386 0.786745 0.738557 0.841009 0.702394 0.688982 0.796871 0.778351 0.827607 0.610118 NA 0.771007 0.7599392 0.7769553 0.661915 0.8328884 0.740930 0.699419 0.497610 0.738010 0.6611625 0.681667 0.6628717 0.6775092 0.665106 0.674183 0.6037652 0.6269355 0.812900 0.461331 0.354706 0.671894 0.440843 0.5323886 0.5171772 0.627332 0.587730 0.551201 0.5438341 0.634713 6 0.771549 0.708217 0.05693979 9 0.751820 0.685038 0.0667820 0.00014253 9.9999e-01 weaklyHypermeth 0.14253 1.000000 insignificant 0.00019889 0.9999429 weaklyHypermeth 0.19889 1.0000 insignificant 0.10951440 0.00025972 weaklyHypermeth 0.25972 insignificant 0.771549 0.4028133 0.355138 9 0.751820 0.437954 0.313866 1.0218e-30 9.9954e-01 hypermethylated 2.5545e-28 1.0000e+00 hypermethylated 1.6383e-10 9.9487e-01 hypermethylated 4.0956e-08 1.0000e+00 hypermethylated 0.3154479 8.5141e-04 hypermethylated 5.0083e-02 hypermethylated 0.771549 0.667599 0.133850 9 0.751820 0.595910 0.1559100 1.5083e-14 1.0000e+00 weaklyHypermeth 1.2569e-12 1.0000000 weaklyHypermeth 2.4100e-11 1.0000e+00 weaklyHypermeth 6.0249e-09 1.0000e+00 weaklyHypermeth 0.1762246 5.3373e-06 weaklyHypermeth 0.0017791 weaklyHypermeth 0.708217 0.4028133 0.3033499 9 0.685038 0.437954 0.2470837 3.1530e-15 9.8633e-01 hypermethylated 3.1530e-13 1.0000e+00 hypermethylated 1.0879e-05 9.4482e-01 hypermethylated 8.3686e-04 1.0000e+00 hypermethylated 0.2059335 7.1513e-03 weaklyHypermeth 1.8898e-01 insignificant 0.708217 0.667599 0.0805196 9 0.685038 0.595910 0.0891281 1.3872e-03 9.9999e-01 weaklyHypermeth 3.8533e-02 1.0000e+00 weaklyHypermeth 4.0531e-03 9.9997e-01 weaklyHypermeth 1.3047e-01 1.0000e+00 insignificant 0.0667102 2.2567e-02 weaklyHypermeth 0.705213 insignificant 0.4028133 0.667599 -0.21406228 9 0.437954 0.595910 -0.1579556 6.8054e-01 1.2877e-08 hypomethylated 1.0000e+00 1.6096e-06 hypomethylated 6.3101e-01 1.4444e-02 weaklyHypometh 1.0000e+00 5.1587e-01 insignificant -0.139223 3.7693e-02 weaklyHypometh 0.96647741 insignificant chr16 53572794 53573794 137851 IRX5 ENSG00000176842 0.903023 245 5 0.882814 117 5 0.888788 96 5 0.961815 272 5 0.822222 35 4 0.910886 224 5 0.846617 86 5 0.819621 111 5 0.951754 70 5 0.971667 84 5 0.935845 126 5 0.801304 59 5 0.862386 124 5 NA 0 0 0.865400 79 5 0.893333 27 5 0.858333 48 5 0.726938 267 5 0.919900 81 5 0.893348 199 5 0.920000 39 4 0.700629 117 5 0.828916 161 5 0.9473684 52 2 0.778882 109 5 0.909821 128 5 0.936437 91 5 0.8350649 55 5 0.910065 39 5 0.9592531 100 5 0.9198653 138 5 0.9157920 220 5 0.8370430 100 5 0.740904 87 5 0.961005 315 5 0.700000 60 5 0.876627 73 5 0.795003 77 5 0.882579 313 5 0.731677 219 5 0.718140 313 5 0.7239933 210 5 0.871369 317 5 0.897801 0.881047 0.893868 0.963480 0.817947 0.914006 0.854284 0.831785 0.949153 0.969158 0.937786 0.801406 0.855950 NA 0.852779 0.9088235 0.8843954 0.721058 0.9135903 0.909496 0.941176 0.693435 0.826966 0.9613003 0.775728 0.9126794 0.9462616 0.839802 0.901261 0.9649895 0.9146654 0.911994 0.848977 0.774905 0.970489 0.704248 0.8903027 0.7607212 0.884657 0.736457 0.724662 0.7383268 0.864010 5 0.882553 0.871898 0.00955737 5 0.879949 0.871722 0.0082270 0.52022552 8.3784e-01 insignificant 1.00000 1.000000 insignificant 0.73084649 0.5452793 insignificant 1.00000 1.0000 insignificant -0.00038542 0.98854075 lowCoverage 1.00000 lowCoverage 0.882553 0.8679775 0.011624 5 0.879949 0.863286 0.016662 3.4380e-01 6.9742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9181e-02 8.3092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0613590 1.8240e-01 lowCoverage 1.0000e+00 lowCoverage 0.882553 0.803936 0.080770 5 0.879949 0.798008 0.0819401 2.0008e-03 9.9988e-01 weaklyHypermeth 4.5473e-02 1.0000000 weaklyHypermeth 5.0622e-04 9.9999e-01 weaklyHypermeth 2.3010e-02 1.0000e+00 weaklyHypermeth 0.0942371 6.3158e-02 lowCoverage 1.0000000 lowCoverage 0.871898 0.8679775 0.0045866 5 0.871722 0.863286 0.0084353 4.6342e-01 6.3589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8145e-02 9.7675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0617444 2.0218e-01 lowCoverage 1.0000e+00 lowCoverage 0.871898 0.803936 0.0726998 5 0.871722 0.798008 0.0737131 1.3667e-02 9.9857e-01 weaklyHypermeth 2.7892e-01 1.0000e+00 insignificant 1.9628e-03 9.9999e-01 weaklyHypermeth 6.7683e-02 1.0000e+00 weaklyHypermeth 0.0946226 6.6592e-02 lowCoverage 1.000000 lowCoverage 0.8679775 0.803936 0.06791640 5 0.863286 0.798008 0.0652778 9.2860e-02 9.8475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4815e-01 9.4312e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.032878 5.5597e-01 insignificant 1.00000000 insignificant chr16 53962542 53963542 137896 IRX6 ENSG00000159387 0.164319 175 10 0.097722 145 10 0.045251 152 11 0.106749 68 8 0.092593 58 5 0.131012 176 7 0.064022 108 8 0.054843 89 7 0.076089 82 5 0.034473 83 6 0.102999 121 7 0.093407 56 5 0.000000 117 8 0.000000 6 0 0.052680 131 8 0.050641 72 6 0.058608 74 6 0.075314 92 8 0.027778 71 7 0.012127 214 10 0.083333 28 2 0.019737 77 6 0.042563 218 9 0.0491819 98 7 0.060897 49 5 0.006476 202 11 0.057099 107 8 0.1000000 33 2 0.055556 54 7 0.0021645 250 10 0.0576368 252 10 0.1663813 204 10 0.0059524 131 9 0.021212 65 6 0.021008 151 6 0.166667 49 5 0.066667 41 4 0.013258 110 9 0.040646 198 8 0.026270 154 8 0.018182 122 10 0.0250000 85 5 0.046591 124 7 0.106397 0.109385 0.031667 0.069559 0.067677 0.126635 0.081326 0.080303 0.119911 0.055882 0.111456 0.112476 0.000000 0.074971 0.053470 0.0801515 0.0225766 0.117412 0.0621212 0.023132 0.127778 0.039234 0.076540 0.0689843 0.085703 0.0050831 0.1074916 0.178182 0.078788 0.0037518 0.0619529 0.165898 0.011255 0.030083 0.022343 0.030303 0.1022222 0.0286616 0.047082 0.036243 0.012121 0.0075758 0.030682 4 0.067464 0.057925 0.00647686 8 0.066480 0.049085 0.0173959 0.24722294 9.7189e-01 insignificant 1.00000 1.000000 insignificant 0.40562547 0.9510017 insignificant 1.00000 1.0000 insignificant 0.00861242 0.59545436 insignificant 1.00000 insignificant 0.067464 0.0255941 0.038919 5 0.066480 0.027172 0.039308 9.7029e-03 1.0000e+00 weaklyHypermeth 1.3861e-01 1.0000e+00 insignificant 3.2119e-02 1.0000e+00 weaklyHypermeth 5.3532e-01 1.0000e+00 insignificant 0.0179040 5.2732e-01 insignificant 1.0000e+00 insignificant 0.068182 0.029283 0.039982 8 0.072524 0.034277 0.0382468 8.5591e-04 3.0649e-01 weaklyHypermeth 2.1398e-02 1.0000000 weaklyHypermeth 7.2497e-03 6.5231e-01 weaklyHypermeth 1.8970e-01 1.0000e+00 insignificant 0.0356936 3.4355e-03 weaklyHypermeth 0.1226972 insignificant 0.057925 0.0255941 0.0228957 8 0.049085 0.027172 0.0219125 1.0075e-01 9.9954e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8412e-01 9.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0092915 7.5016e-01 insignificant 1.0000e+00 insignificant 0.058147 0.029283 0.0364351 8 0.053547 0.034277 0.0192695 9.4423e-02 4.2895e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0790e-01 6.5061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0270812 7.1293e-02 insignificant 1.000000 insignificant 0.0259740 0.029283 0.00037891 5 0.029642 0.034277 -0.0046351 7.0660e-01 3.7479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9940e-01 4.8134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.017790 5.1588e-01 insignificant 1.00000000 insignificant chr16 54909654 54910654 137956 GNAO1 ENSG00000087258 0.274093 155 5 0.111111 142 5 0.309524 36 5 0.034958 174 5 0.142857 35 5 0.238186 175 5 0.033333 59 5 0.078656 114 5 0.042222 48 5 0.066667 45 5 0.047619 84 5 0.066667 30 5 0.028571 36 5 0.000000 25 5 0.055556 46 5 NA 0 0 NA 0 0 0.031866 317 5 0.019487 129 5 0.015662 194 5 0.048485 42 5 0.066667 11 0 0.100000 52 5 0.0519481 110 5 0.049542 149 5 0.199599 202 5 0.031944 68 6 0.0000000 38 5 0.142157 90 5 0.1916306 171 5 0.0288196 210 5 0.1421053 107 5 0.0111111 90 5 0.010526 95 5 0.000000 386 5 NA 0 0 0.051948 181 5 0.000000 179 5 0.204902 172 5 0.019231 129 5 0.104718 196 5 0.0095238 100 5 0.148746 158 5 0.129652 0.000000 0.171650 0.035229 0.141750 0.086261 0.033592 0.078929 0.041688 0.067183 0.047988 0.067183 0.028793 0.000000 0.067183 NA NA 0.032113 0.0235659 0.015783 0.058633 0.067183 0.020155 0.0732911 0.059624 0.0392576 0.0134367 0.000000 0.071135 0.0299674 0.0290430 0.142150 0.010767 0.010608 0.000000 NA 0.0061076 0.0000000 0.045131 0.022958 0.025861 0.0095976 0.044761 4 0.053145 0.054531 0.00069212 5 0.146907 0.089308 0.0575993 0.16657336 5.2454e-01 insignificant 1.00000 1.000000 insignificant 0.27025010 0.9409051 insignificant 1.00000 1.0000 insignificant 0.00098277 0.97323600 lowCoverage 1.00000 lowCoverage 0.053145 0.0043057 0.048399 5 0.146907 0.058258 0.088649 1.3586e-03 9.9972e-01 weaklyHypermeth 2.3836e-02 1.0000e+00 weaklyHypermeth 2.1724e-03 9.9972e-01 weaklyHypermeth 4.6222e-02 1.0000e+00 weaklyHypermeth 0.0740071 5.4039e-03 lowCoverage 1.5528e-01 lowCoverage 0.053145 0.037086 0.018817 5 0.146907 0.121854 0.0250527 1.1435e-01 7.9358e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.5223e-01 9.2611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0086999 8.4670e-01 lowCoverage 1.0000000 lowCoverage 0.054487 0.0042965 0.0475355 5 0.076549 0.049936 0.0266137 1.7895e-02 9.9972e-01 weaklyHypermeth 2.7531e-01 1.0000e+00 insignificant 3.5627e-02 9.9906e-01 weaklyHypermeth 6.0385e-01 1.0000e+00 insignificant 0.0730243 3.9951e-03 lowCoverage 1.3848e-01 lowCoverage 0.054531 0.037086 0.0153088 5 0.089308 0.121854 -0.0325466 3.2271e-01 4.6133e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8219e-01 5.0370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0096826 8.2540e-01 lowCoverage 1.000000 lowCoverage 0.0043057 0.037086 -0.02954513 5 0.058258 0.121854 -0.0635958 9.9746e-01 2.0963e-03 weaklyHypometh 1.0000e+00 6.7621e-02 weaklyHypometh 9.9543e-01 2.1564e-02 weaklyHypometh 1.0000e+00 6.3423e-01 insignificant -0.082707 9.1323e-02 lowCoverage 1.00000000 lowCoverage chr16 55086120 55087120 137958 OGFOD1 ENSG00000087263 0.801529 243 5 0.678384 94 5 0.712052 75 5 0.776843 116 5 0.752339 66 5 0.725956 183 5 0.834467 61 5 0.581061 100 5 0.760251 99 5 0.839002 67 5 0.629073 136 5 0.841835 54 5 0.634067 97 5 1.000000 7 1 0.823529 106 5 0.638936 53 3 0.714935 45 5 0.701577 131 5 0.818530 105 5 0.828137 216 5 0.906092 36 3 0.842926 69 5 0.799208 112 5 0.8428571 28 2 0.920000 31 5 0.859370 129 5 0.640091 54 4 0.7238095 27 2 0.732063 86 5 0.5913738 137 5 0.6814468 91 5 0.7350684 243 5 0.7550297 77 5 0.718315 75 5 0.660542 107 5 0.763333 35 5 0.700680 44 3 0.690079 106 5 0.884442 216 5 0.747151 161 5 0.730904 138 5 0.7001147 175 5 0.781413 157 5 0.879551 0.719922 0.760729 0.857566 0.792353 0.809492 0.774214 0.761370 0.839178 0.872573 0.783749 0.813633 0.795343 NA 0.843324 0.6520418 0.7108844 0.860083 0.8571677 0.852913 0.863782 0.875143 0.845544 0.8702624 0.931973 0.8911189 0.7456538 0.693878 0.800022 0.7790295 0.8520833 0.813663 0.750513 0.726377 0.740798 0.773810 0.9286524 0.7526725 0.833830 0.919132 0.900654 0.8747864 0.867475 2 0.810127 0.816874 -0.00337205 5 0.768025 0.811973 -0.0439478 0.59698550 4.2970e-01 insignificant 1.00000 1.000000 insignificant 0.95321640 0.2959921 insignificant 1.00000 1.0000 insignificant -0.01823374 0.63196886 lowCoverage 1.00000 lowCoverage 0.810269 0.7522523 0.061908 5 0.749366 0.589147 0.160218 3.2253e-03 9.4110e-01 weaklyHypermeth 5.0395e-02 1.0000e+00 weaklyHypermeth 1.5772e-01 9.2459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0399620 1.5754e-01 lowCoverage 1.0000e+00 lowCoverage 0.810547 0.860685 -0.054134 5 0.780695 0.809627 -0.0289319 9.4576e-01 4.5248e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.2591e-01 1.4855e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0141797 7.2285e-01 lowCoverage 1.0000000 lowCoverage 0.816346 0.7522523 0.0685366 5 0.758251 0.589147 0.1691037 2.4749e-02 8.8898e-01 weaklyHypermeth 3.6395e-01 1.0000e+00 insignificant 1.2320e-01 8.4706e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0581957 1.1051e-01 lowCoverage 1.0000e+00 lowCoverage 0.816699 0.860685 -0.0496056 5 0.788470 0.809627 -0.0211573 9.6556e-01 1.8914e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6796e-01 6.5676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0040540 9.2811e-01 lowCoverage 1.000000 lowCoverage 0.7522523 0.860520 -0.10860152 5 0.589147 0.782431 -0.1932834 9.8340e-01 1.2586e-03 weaklyHypometh 1.0000e+00 4.3401e-02 weaklyHypometh 9.1646e-01 1.3086e-02 weaklyHypometh 1.0000e+00 4.8466e-01 insignificant -0.054142 1.7891e-01 lowCoverage 1.00000000 lowCoverage chr16 55706575 55707575 137984 CPNE2 ENSG00000140848 0.450363 301 8 0.617268 308 12 0.641513 279 11 0.489438 320 8 0.673728 195 10 0.662218 460 12 0.671613 239 10 0.707556 363 12 0.695197 210 11 0.548111 247 11 0.671408 463 11 0.707762 130 9 0.594355 252 10 0.500723 219 9 0.583325 379 11 0.608658 108 10 0.675000 81 2 0.452611 456 10 0.809350 480 11 0.683345 322 11 0.561113 194 12 0.326812 200 11 0.669693 199 11 0.5687720 204 9 0.752221 340 12 0.702071 488 12 0.569087 415 11 0.5486566 138 11 0.638655 515 11 0.7502367 453 12 0.7018188 400 12 0.6896869 346 9 0.5692255 352 11 0.787519 318 12 0.600000 182 6 0.499061 307 6 0.585052 341 12 0.677753 550 12 0.084511 425 8 0.347979 367 9 0.342839 462 9 0.3532853 389 8 0.181253 261 9 0.554290 0.577817 0.610583 0.568340 0.636459 0.623758 0.658336 0.678682 0.625194 0.612162 0.655061 0.699852 0.559603 0.645567 0.521748 0.5617146 0.7563176 0.480926 0.7901499 0.554770 0.655244 0.332381 0.581394 0.7116734 0.568541 0.5751619 0.5511096 0.684403 0.572955 0.5995231 0.6012937 0.678501 0.519706 0.830592 0.798877 0.421465 0.8057428 0.6753177 0.063286 0.260235 0.228769 0.3795190 0.169474 6 0.623473 0.622205 0.02071828 11 0.575051 0.632845 -0.0577937 0.75788691 9.4062e-01 insignificant 1.00000 1.000000 insignificant 0.94702121 0.9734741 insignificant 1.00000 1.0000 insignificant -0.00105812 0.97930780 insignificant 1.00000 insignificant 0.624073 0.6692683 -0.010217 11 0.557910 0.547120 0.010789 3.3794e-02 8.9123e-02 inconclusive 4.5845e-01 1.0000e+00 insignificant 8.7567e-01 3.7737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0024087 9.5959e-01 insignificant 1.0000e+00 insignificant 0.624116 0.254202 0.403547 8 0.561529 0.229148 0.3323806 1.4728e-37 1.0000e+00 hypermethylated 7.3639e-35 1.0000000 hypermethylated 6.0846e-18 1.0000e+00 hypermethylated 6.0846e-15 1.0000e+00 hypermethylated 0.3602038 1.4176e-03 weaklyHypermeth 0.0746091 weaklyHypermeth 0.622039 0.6692683 -0.0116067 12 0.603290 0.547120 0.0561693 1.1874e-01 5.8900e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5813e-01 2.6161e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0034668 9.4930e-01 insignificant 1.0000e+00 insignificant 0.622360 0.254202 0.3932099 9 0.640995 0.229148 0.4118468 3.5604e-30 1.0000e+00 hypermethylated 1.7802e-27 1.0000e+00 hypermethylated 5.9338e-15 1.0000e+00 hypermethylated 5.9338e-12 1.0000e+00 hypermethylated 0.3612619 7.1147e-04 hypermethylated 0.067135 hypermethylated 0.6695949 0.254202 0.40966497 9 0.581315 0.229148 0.3521670 4.4464e-11 1.0000e+00 hypermethylated 1.1116e-08 1.0000e+00 hypermethylated 1.5254e-06 1.0000e+00 hypermethylated 7.6271e-04 1.0000e+00 hypermethylated 0.357795 8.7818e-04 hypermethylated 0.06016298 hypermethylated chr16 56228550 56229550 137992 GPR56 ENSG00000205336 0.822098 60 3 0.741463 164 5 0.561738 125 5 0.603333 33 5 0.609287 73 5 0.584226 103 5 0.805434 96 5 0.708214 168 5 0.657890 134 5 0.645527 101 5 0.770293 218 5 0.628788 59 3 0.332083 140 3 0.722222 20 3 0.569276 119 5 0.425000 38 3 0.269231 66 2 0.495370 35 3 0.448671 111 5 0.570912 126 5 0.656914 59 3 0.126374 38 3 0.657407 88 3 0.4044872 70 3 0.511364 19 1 0.752826 171 5 0.771916 82 5 0.6222222 63 3 0.692573 141 5 0.6822072 209 5 0.5917321 169 5 0.8647078 166 5 0.3732127 160 3 0.296696 99 3 0.519231 131 4 0.320000 17 2 0.348674 93 5 0.444919 191 5 0.381250 93 3 0.293158 107 5 0.221974 60 3 0.3588031 91 3 0.080952 44 3 0.720801 0.704075 0.666073 0.483192 0.599166 0.480352 0.739551 0.613576 0.562961 0.591499 0.755320 0.630291 0.353507 0.605097 0.533206 0.6377119 0.4332289 0.400188 0.4216644 0.495643 0.798179 0.138527 0.662665 0.6071056 0.492367 0.6817539 0.6845624 0.803672 0.686895 0.6342425 0.6271445 0.801120 0.161108 0.115169 0.162738 0.174576 0.2609206 0.3520336 0.208898 0.233671 0.296190 0.3311905 0.143664 3 0.579688 0.679216 -0.09468597 5 0.605092 0.549640 0.0554518 0.95809654 4.7351e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.89608450 0.4524519 insignificant 1.00000 1.0000 insignificant -0.01267478 0.84794528 lowCoverage 1.00000 lowCoverage 0.579477 0.2778582 0.275088 5 0.539274 0.359535 0.179739 1.6603e-10 9.2122e-01 hypermethylated 6.9179e-09 1.0000e+00 hypermethylated 3.6968e-05 9.9237e-01 hypermethylated 1.9457e-03 1.0000e+00 hypermethylated 0.2147641 4.0238e-04 lowCoverage 3.6580e-02 lowCoverage 0.580645 0.182278 0.343252 3 0.647129 0.280630 0.3664990 6.3390e-14 1.0000e+00 lowCoverage 4.8762e-12 1.0000000 lowCoverage 1.2456e-06 1.0000e+00 lowCoverage 9.5815e-05 1.0000e+00 lowCoverage 0.3313253 1.0576e-03 lowCoverage 0.0596129 lowCoverage 0.681102 0.2778582 0.3849529 5 0.607913 0.359535 0.2483787 2.6441e-11 9.9470e-01 hypermethylated 1.5553e-09 1.0000e+00 hypermethylated 1.5412e-04 9.5353e-01 hypermethylated 7.3388e-03 1.0000e+00 hypermethylated 0.2274389 3.2210e-03 lowCoverage 1.1930e-01 lowCoverage 0.682715 0.182278 0.4542121 3 0.729496 0.280630 0.4488665 5.3316e-14 1.0000e+00 lowCoverage 1.0663e-11 1.0000e+00 lowCoverage 1.3447e-05 9.9998e-01 lowCoverage 1.6599e-03 1.0000e+00 lowCoverage 0.3440001 8.3262e-04 lowCoverage 0.069385 lowCoverage 0.2790698 0.182278 0.03504639 3 0.431442 0.280630 0.1508120 1.4706e-02 2.9723e-01 lowCoverage 8.1700e-01 1.0000e+00 lowCoverage 2.0593e-01 2.9862e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.116561 1.1224e-01 lowCoverage 1.00000000 lowCoverage chr16 57932480 57933480 138108 ENSG00000213437 0.62745 62 5 0.43333 37 3 0.36591 27 3 0.75000 52 6 0.70455 14 1 0.57375 127 6 0.42572 29 3 0.59127 45 6 0.50000 14 1 0.82672 31 3 0.61389 33 3 0.38333 14 2 0.48425 61 3 NA 0 0 0.70833 31 3 0.60000 14 1 0.54444 18 1 0.64116 43 3 0.50000 14 1 0.66036 156 6 0.83000 22 1 0.67424 44 5 0.92857 17 1 0.86667 17 2 0.77083 19 2 0.75833 18 1 0.87302 25 2 0.41667 12 0 0.61111 31 4 0.68750 23 3 0.66026 29 3 0.71353 95 4 0.52667 24 1 0.27778 19 1 0.61905 45 3 0.70182 26 2 0.42500 15 1 0.76786 18 2 0.80350 72 6 0.81566 37 3 0.78788 30 4 0.74375 38 4 0.82857 54 6 0.37500 0.44444 0.54773 0.81667 0.74242 0.43864 0.72676 0.62460 0.58333 0.88889 0.69722 0.71714 0.46591 NA 0.87500 0.63333 0.60556 0.62727 0.50000 0.71614 0.82500 0.64091 0.85714 1.00000 0.73611 0.73889 0.83333 0.65277 0.63889 0.62500 0.54274 0.72013 0.70556 0.50000 0.95238 0.70714 0.51667 0.70238 0.85106 0.86111 0.79798 0.78750 0.86190 0 0.60219 0.69602 -0.0490990 3 0.61884 0.67592 -0.05707717 0.96619 7.8385e-02 lowCoverage 1 1.000000 lowCoverage 0.999586 2.2675e-02 lowCoverage 1 1.0000000 lowCoverage -0.15706145 0.0044946 lowCoverage 1 lowCoverage 0.60219 0.72109 -0.089558 1 0.61884 0.64135 -0.0225053 0.61204011 0.0894318 lowCoverage 1.000000 1.0000 lowCoverage 0.362681 5.8264e-01 lowCoverage 1 1.000000 lowCoverage 0.022471 0.7867520 lowCoverage 1.00000 lowCoverage 0.60219 0.80519 -0.2086069 5 0.61884 0.79774 -0.1788929 9.8340e-01 4.8908e-05 hypomethylated 1.00000000 0.048908 hypomethylated 0.986071 0.00014806 hypomethylated 1 0.14806 insignificant -0.220373 8.4701e-07 lowCoverage 0.00084701 lowCoverage 0.69602 0.72109 -0.0387894 1 0.67592 0.64135 0.0345718 0.5258047 0.434088 lowCoverage 1.00000 1 lowCoverage 0.057979 0.957245 lowCoverage 1 1 lowCoverage 0.1795324 0.066037 lowCoverage 1 lowCoverage 0.69602 0.80519 -0.111004 3 0.67592 0.79774 -0.121816 9.5629e-01 0.012204 lowCoverage 1.0000e+00 1 lowCoverage 0.54786644 0.086479 lowCoverage 1.000000 1 lowCoverage -0.063311 1.6200e-01 lowCoverage 1.00000000 lowCoverage 0.72109 0.80519 -0.124568 1 0.64135 0.79774 -0.156388 9.8415e-01 1.2972e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.99485650 0.0191803 lowCoverage 1.00000 1.00000 lowCoverage -0.2428438 2.1416e-02 lowCoverage 1.0000000 lowCoverage chr16 58160806 58161806 138136 ENSG00000200062 0.82776 268 9 0.82374 84 7 0.78614 87 7 0.88168 233 9 0.95000 38 4 0.84270 311 11 0.43192 54 4 0.85584 70 6 0.86071 41 3 0.91591 70 6 0.91734 135 7 1.00000 16 1 0.87778 105 7 NA 0 0 0.81548 63 7 0.57143 22 1 1.00000 50 6 0.87412 288 9 0.84978 117 10 0.85787 314 11 0.74830 41 3 0.88747 81 7 0.85965 146 11 0.97143 18 1 0.84059 88 10 0.83390 197 10 0.71695 73 5 0.90000 52 4 0.76011 64 5 0.88442 216 10 0.79421 182 11 0.87556 354 11 0.86695 113 7 0.75653 93 6 0.83317 270 11 0.76250 41 5 0.85556 37 3 0.81788 211 11 0.81182 230 9 0.87216 279 9 0.85773 292 9 0.86693 146 9 0.88924 254 9 0.95112 0.81165 0.79914 0.92646 0.94452 0.89691 0.64597 0.81369 0.93902 0.94629 0.92976 1.00000 0.97290 NA 0.90788 0.62195 1.00000 0.93446 0.91077 0.93522 0.79743 0.92723 0.89060 0.98780 0.86197 0.91967 0.83603 0.96951 0.87589 0.93691 0.84795 0.92283 0.87316 0.81590 0.89772 0.84756 0.93496 0.90027 0.94889 0.97062 0.92564 0.91739 0.94989 1 0.86686 0.85487 0.0017656 10 0.85282 0.82783 0.02498934 0.56243 5.8134e-01 insignificant 1 1.000000 insignificant 0.274549 6.0708e-01 insignificant 1 1.0000000 insignificant -0.00042444 0.9909963 insignificant 1 insignificant 0.86686 0.84444 0.025391 11 0.85282 0.83262 0.0201978 0.14971520 0.9267182 insignificant 1.000000 1.0000 insignificant 0.133844 7.6019e-01 insignificant 1 1.000000 insignificant 0.023527 0.5216720 insignificant 1.00000 insignificant 0.86681 0.88759 -0.0260424 9 0.83944 0.86621 -0.0267713 9.3740e-01 5.1824e-02 insignificant 1.00000000 1.000000 insignificant 0.532522 0.12446754 insignificant 1 1.00000 insignificant -0.020618 5.4301e-01 insignificant 1.00000000 insignificant 0.85487 0.84444 0.0229655 10 0.82783 0.83262 -0.0047916 0.1050523 0.819939 insignificant 1.00000 1 insignificant 0.352287 0.690808 insignificant 1 1 insignificant 0.0239519 0.412741 insignificant 1 insignificant 0.85525 0.88759 -0.022189 9 0.84248 0.86621 -0.023729 9.6271e-01 0.034475 weaklyHypometh 1.0000e+00 1 insignificant 0.95471554 0.107233 insignificant 1.000000 1 insignificant -0.020194 4.2800e-01 insignificant 1.00000000 insignificant 0.84404 0.88759 -0.054203 9 0.81740 0.86621 -0.048805 9.9487e-01 1.2685e-03 weaklyHypometh 1.000000 0.211410 insignificant 0.94432516 0.0497271 weaklyHypometh 1.00000 1.00000 insignificant -0.0441454 8.9666e-02 insignificant 1.0000000 insignificant chr16 58925669 58926669 138244 ENSG00000200911 0.71801 262 6 0.61481 60 6 0.72594 97 6 0.67142 135 6 0.75397 53 6 0.66349 199 6 0.60916 97 6 0.63987 65 5 0.61941 59 5 0.66703 55 6 0.64173 181 6 0.64937 60 6 0.73123 52 5 NA 0 0 0.72775 98 6 0.79306 42 6 0.72601 62 6 0.77803 159 6 0.66624 121 6 0.68268 168 6 0.86111 22 2 0.84343 32 2 0.65861 144 6 0.60714 18 2 0.88889 16 0 0.64429 135 6 0.59167 31 3 0.70238 22 2 0.68916 74 6 0.65635 135 6 0.68482 107 6 0.65332 188 6 0.73433 78 5 0.56052 123 6 0.64942 91 6 0.76111 75 6 0.76852 36 3 0.72192 149 6 0.72043 218 6 0.69170 229 6 0.65528 150 6 0.70104 244 6 0.71645 224 6 0.77014 0.68320 0.75442 0.74808 0.80926 0.71280 0.68623 0.66354 0.68290 0.72990 0.68308 0.70142 0.76519 NA 0.76463 0.82541 0.73767 0.84192 0.76073 0.72451 0.86915 0.83847 0.72167 0.66804 0.86226 0.72819 0.68802 0.76860 0.74702 0.71932 0.70376 0.72999 0.74499 0.59680 0.70732 0.73967 0.74977 0.71982 0.77790 0.74828 0.68654 0.72611 0.76162 2 0.68840 0.69156 0.0176395 6 0.68966 0.66711 0.02254818 0.13913 7.0770e-01 insignificant 1 1.000000 insignificant 0.680741 9.5518e-02 insignificant 1 1.0000000 insignificant -0.01838495 0.5700769 lowCoverage 1 lowCoverage 0.68840 0.67754 0.022405 6 0.68966 0.68049 0.0091643 0.01381837 0.4722739 weaklyHypermeth 0.690918 1.0000 insignificant 0.229343 2.9167e-01 insignificant 1 1.000000 insignificant -0.010923 0.7651308 insignificant 1.00000 insignificant 0.68840 0.68826 -0.0099521 6 0.68966 0.69918 -0.0095272 7.8097e-01 3.7050e-01 insignificant 1.00000000 1.000000 insignificant 0.688291 0.64389887 insignificant 1 1.00000 insignificant -0.008601 6.2447e-01 insignificant 1.00000000 insignificant 0.69156 0.67754 0.0066912 6 0.66711 0.68049 -0.0133839 0.0043100 0.161060 weaklyHypermeth 0.26938 1 insignificant 0.019743 0.609178 weaklyHypermeth 1 1 insignificant 0.0074623 0.867264 lowCoverage 1 lowCoverage 0.69156 0.68826 -0.025625 6 0.66711 0.69918 -0.032075 9.5126e-01 0.178899 insignificant 1.0000e+00 1 insignificant 0.50144790 0.824065 insignificant 1.000000 1 insignificant 0.009784 7.5912e-01 lowCoverage 1.00000000 lowCoverage 0.67754 0.68826 -0.032202 6 0.68049 0.69918 -0.018692 6.7003e-01 3.7173e-02 weaklyHypometh 1.000000 1.000000 insignificant 0.57698409 0.1418863 insignificant 1.00000 1.00000 insignificant 0.0023217 9.4879e-01 insignificant 1.0000000 insignificant chr16 58989340 58990340 138261 ENSG00000214470 0.73836 282 8 0.51864 73 3 0.76461 68 8 0.75714 135 8 0.77256 57 5 0.75977 203 8 0.62476 113 8 0.73922 64 3 0.57176 75 8 0.83780 96 8 0.76000 195 8 0.78512 41 5 0.75777 89 8 NA 0 0 0.72955 102 8 0.72002 73 8 0.91964 62 8 0.73148 196 8 0.75674 134 8 0.83561 204 8 0.64602 47 3 0.74479 68 8 0.74877 164 8 0.63958 29 2 0.85000 59 8 0.69384 97 8 0.77246 63 6 0.84722 21 3 0.60625 56 3 0.66028 122 8 0.69712 124 8 0.72964 292 8 0.64098 91 7 0.66702 151 8 0.68990 123 8 0.73253 114 8 0.69643 31 3 0.62841 126 8 0.78983 255 8 0.77020 232 8 0.75776 217 8 0.71891 243 8 0.79524 261 8 0.79166 0.63170 0.80116 0.75566 0.80575 0.78022 0.62511 0.74332 0.58842 0.83665 0.80952 0.79691 0.81237 NA 0.78190 0.77456 0.95319 0.75739 0.80161 0.89053 0.71698 0.71800 0.75430 0.58806 0.82162 0.74339 0.75872 0.79843 0.69381 0.71179 0.77722 0.74364 0.68527 0.69047 0.68449 0.73233 0.77703 0.63263 0.84411 0.78022 0.80262 0.72237 0.81673 3 0.74934 0.74081 0.0220081 8 0.74730 0.73109 0.01620393 0.20060 7.3059e-01 insignificant 1 1.000000 insignificant 0.095817 6.2810e-01 insignificant 1 1.0000000 insignificant 0.02141719 0.4907941 insignificant 1 insignificant 0.74934 0.67296 0.080665 8 0.74730 0.67533 0.0719726 0.00011406 0.9963588 weaklyHypermeth 0.011406 1.0000 weaklyHypermeth 0.013865 9.9666e-01 weaklyHypermeth 1 1.000000 insignificant 0.065204 0.0207756 weaklyHypermeth 1.00000 insignificant 0.74934 0.76821 -0.0203477 8 0.74730 0.76882 -0.0215206 9.2621e-01 2.3842e-01 insignificant 1.00000000 1.000000 insignificant 0.924584 0.37739798 insignificant 1 1.00000 insignificant -0.025308 3.2062e-01 insignificant 1.00000000 insignificant 0.74081 0.67296 0.0608870 8 0.73109 0.67533 0.0557687 0.0083851 0.995933 weaklyHypermeth 0.46584 1 insignificant 0.138688 0.992213 insignificant 1 1 insignificant 0.0437865 0.130303 insignificant 1 insignificant 0.74081 0.76821 -0.040731 8 0.73109 0.76882 -0.037725 9.8411e-01 0.091313 insignificant 1.0000e+00 1 insignificant 0.93291156 0.100187 insignificant 1.000000 1 insignificant -0.046726 9.6422e-02 insignificant 1.00000000 insignificant 0.67296 0.76821 -0.100101 8 0.67533 0.76882 -0.093493 9.9997e-01 3.2282e-04 weaklyHypometh 1.000000 0.064564 weaklyHypometh 0.99998685 0.0126867 weaklyHypometh 1.00000 1.00000 insignificant -0.0905120 1.8435e-03 weaklyHypometh 0.6144968 insignificant chr16 62759178 62760178 138719 ENSG00000223123 0.92240 81 5 0.95035 204 5 0.74319 104 5 1.00000 9 0 0.91517 96 5 0.78103 58 4 0.90333 76 5 0.95848 117 5 0.89859 119 5 0.93717 121 5 0.91680 164 5 0.83215 92 5 0.88215 140 5 NA 0 0 0.99545 163 5 0.76167 45 5 0.84941 61 5 0.71056 31 4 0.93346 174 5 0.87620 55 4 0.96667 19 2 1.00000 4 0 0.97778 51 5 0.92000 25 3 NA 0 0 0.92767 180 4 0.97500 34 4 0.93333 10 0 0.86504 186 4 0.95365 218 5 0.95332 192 4 0.94757 73 5 0.96981 226 5 0.98570 114 5 1.00000 223 5 1.00000 3 0 0.98889 62 4 0.88849 242 4 0.74571 27 3 0.78756 70 5 0.78333 22 2 0.75000 12 0 0.80000 21 2 0.92605 0.95023 0.74848 1.00000 0.90849 0.79588 0.90269 0.96523 0.90027 0.93582 0.92068 0.82693 0.89282 NA 0.99402 0.80263 0.84087 0.70936 0.93811 0.87025 0.95175 0.98255 0.98246 0.93684 NA 0.94413 0.96382 0.95614 0.89464 0.95274 0.95036 0.95544 0.96711 0.98020 1.00000 0.99752 0.98392 0.84583 0.73816 0.77142 0.78947 0.71917 0.82456 0 0.90314 0.95665 -0.0531564 4 0.90045 0.94590 -0.04544319 0.99862 5.5434e-05 lowCoverage 1 0.055434 lowCoverage 0.999569 1.0276e-06 lowCoverage 1 0.0010276 lowCoverage -0.06477182 0.0065867 lowCoverage 1 lowCoverage 0.90314 0.94828 -0.043827 5 0.90045 0.95878 -0.0583305 0.97630775 0.0008811 weaklyHypometh 1.000000 0.8811 insignificant 0.999999 7.4119e-06 weaklyHypometh 1 0.007412 weaklyHypometh -0.089646 0.0028115 lowCoverage 0.93715 lowCoverage 0.90314 0.76974 0.1331067 2 0.90045 0.77603 0.1244205 1.1887e-06 1.0000e+00 lowCoverage 0.00059437 1.000000 lowCoverage 0.018227 0.99896478 lowCoverage 1 1.00000 lowCoverage 0.109180 5.8801e-05 lowCoverage 0.01960048 lowCoverage 0.95665 0.94828 0.0071762 4 0.94590 0.95878 -0.0128874 0.4744067 0.049981 lowCoverage 1.00000 1 lowCoverage 0.939735 0.064184 lowCoverage 1 1 lowCoverage -0.0248746 0.255145 lowCoverage 1 lowCoverage 0.95665 0.76974 0.180985 2 0.94590 0.77603 0.169864 1.9180e-11 1.000000 lowCoverage 1.9180e-08 1 lowCoverage 0.00019357 0.999995 lowCoverage 0.096786 1 lowCoverage 0.173952 1.3096e-07 lowCoverage 0.00013096 lowCoverage 0.94828 0.76974 0.175319 2 0.95878 0.77603 0.182751 1.2369e-05 1.0000e+00 lowCoverage 0.012369 1.000000 lowCoverage 0.00033411 0.9999993 lowCoverage 0.33411 1.00000 lowCoverage 0.1988266 9.4924e-06 lowCoverage 0.0047462 lowCoverage chr16 63702424 63703424 138825 ENSG00000223123 0.81239 187 5 0.70687 90 5 0.80048 82 5 0.80549 120 5 0.78500 46 5 0.74151 242 5 0.82249 101 5 0.80324 97 5 0.83344 108 5 0.79713 80 5 0.76452 121 5 0.82454 92 5 0.77737 116 5 NA 0 0 0.78070 99 5 0.66556 96 5 0.82061 80 5 0.76914 142 5 0.82476 68 5 0.77272 193 5 0.84444 60 4 0.76131 66 5 0.79948 133 5 0.83586 58 5 0.81905 33 5 0.84646 98 5 0.84830 116 5 0.77726 42 3 0.74000 54 5 0.78489 142 5 0.75496 93 5 0.79617 218 5 0.81919 120 5 0.60955 76 5 0.74444 40 2 0.77381 40 5 0.68332 103 5 0.75000 110 5 0.85582 225 5 0.84359 173 5 0.83972 178 5 0.84061 210 5 0.86345 159 5 0.83770 0.73608 0.82120 0.84567 0.81281 0.76996 0.85702 0.83168 0.87066 0.83506 0.78572 0.85810 0.81513 NA 0.82593 0.70123 0.84865 0.81063 0.85266 0.80284 0.86864 0.79364 0.82380 0.85922 0.81257 0.87943 0.84795 0.73226 0.75649 0.82258 0.79884 0.82978 0.84543 0.63161 0.81764 0.81029 0.70466 0.79392 0.87321 0.86988 0.86906 0.86570 0.88248 5 0.79907 0.81312 0.0028092 5 0.78345 0.78373 -0.00027558 0.41897 7.1610e-01 insignificant 1 1.000000 insignificant 0.353579 4.9001e-01 insignificant 1 1.0000000 insignificant -0.01605082 0.2874321 lowCoverage 1 lowCoverage 0.79907 0.73824 0.057532 5 0.78345 0.72656 0.0568943 0.00314845 0.9477057 weaklyHypermeth 0.174914 1.0000 insignificant 0.306639 6.7042e-01 insignificant 1 1.000000 insignificant 0.054579 0.1346608 lowCoverage 1.00000 lowCoverage 0.79907 0.87302 -0.0606099 5 0.78345 0.84845 -0.0649979 9.9793e-01 5.4141e-04 weaklyHypometh 1.00000000 0.180469 insignificant 0.997913 0.00143120 weaklyHypometh 1 0.52302 insignificant -0.064007 6.6936e-06 lowCoverage 0.00334680 lowCoverage 0.81312 0.73824 0.0573600 5 0.78373 0.72656 0.0571698 0.0382623 0.982549 weaklyHypermeth 1.00000 1 insignificant 0.377503 0.692322 insignificant 1 1 insignificant 0.0706298 0.067073 lowCoverage 1 lowCoverage 0.81312 0.87302 -0.058840 5 0.78373 0.84845 -0.064722 9.9920e-01 0.018377 weaklyHypometh 1.0000e+00 1 insignificant 0.99944952 0.032153 weaklyHypometh 1.000000 1 insignificant -0.047956 1.2830e-03 lowCoverage 0.42766017 lowCoverage 0.73824 0.87302 -0.119499 5 0.72656 0.84845 -0.121892 9.9975e-01 1.9835e-03 weaklyHypometh 1.000000 0.216901 insignificant 0.98857517 0.0104954 weaklyHypometh 1.00000 1.00000 insignificant -0.1185855 1.0474e-02 lowCoverage 1.0000000 lowCoverage chr16 64253421 64254421 138918 CDH11 ENSG00000140937 0.71214 85 5 0.69333 27 3 0.58269 50 5 0.78812 69 5 0.38095 32 5 0.71768 130 5 0.53294 50 4 0.67214 35 5 0.70476 15 1 0.65357 39 5 0.59698 80 5 0.72000 23 4 0.59905 34 4 0.55 24 1 0.70556 28 3 0.42667 15 1 0.70000 14 1 0.61351 82 5 0.65333 37 5 0.64703 102 5 0.60333 22 3 0.71556 41 5 0.69472 58 5 0.36667 11 0 0.83333 8 1 0.59668 48 4 0.52841 29 3 0.55556 18 1 0.60284 43 5 0.58072 43 3 0.70256 47 5 0.72577 156 5 0.53621 47 5 0.65346 47 5 0.43222 49 5 0.70000 9 0 0.42636 50 5 0.62000 37 5 0.64197 120 5 0.84464 64 5 0.77930 79 5 0.84000 37 5 0.71666 81 5 0.75093 0.69765 0.64419 0.80872 0.42723 0.72735 0.57705 0.71001 0.74648 0.68989 0.62675 0.76056 0.63514 0.55282 0.74061 0.51831 0.75352 0.65835 0.69718 0.69437 0.61620 0.72958 0.70748 0.38028 0.70515 0.59076 0.56573 0.71831 0.61671 0.63698 0.74323 0.72937 0.57241 0.66580 0.45908 0.67606 0.44910 0.66620 0.68249 0.87681 0.80643 0.85352 0.74163 0 0.69722 0.68906 0.0028384 5 0.65171 0.66062 -0.00890993 0.39826 4.4107e-01 insignificant 1 1.000000 insignificant 0.374325 6.4647e-01 insignificant 1 1.0000000 insignificant 0.00701073 0.8667872 lowCoverage 1 lowCoverage 0.69722 0.56485 0.117090 5 0.65171 0.53177 0.1199424 0.00019213 0.9997575 weaklyHypermeth 0.013723 1.0000 weaklyHypermeth 0.074198 9.6270e-01 insignificant 1 1.000000 insignificant 0.071147 0.2133073 lowCoverage 1.00000 lowCoverage 0.69722 0.76640 -0.0761601 5 0.65171 0.73392 -0.0822045 9.9705e-01 1.7338e-02 weaklyHypometh 1.00000000 1.000000 insignificant 0.999982 0.00156905 weaklyHypometh 1 0.52302 insignificant -0.131991 2.1016e-02 lowCoverage 1.00000000 lowCoverage 0.68906 0.56485 0.1192806 5 0.66062 0.53177 0.1288523 0.0014863 0.998062 weaklyHypermeth 0.10793 1 insignificant 0.203724 0.938954 insignificant 1 1 insignificant 0.0641358 0.297021 lowCoverage 1 lowCoverage 0.68906 0.76640 -0.079091 5 0.66062 0.73392 -0.073295 9.8940e-01 0.026231 weaklyHypometh 1.0000e+00 1 insignificant 0.99791958 0.003526 weaklyHypometh 1.000000 1 insignificant -0.139001 2.1820e-02 lowCoverage 1.00000000 lowCoverage 0.56485 0.76640 -0.194335 5 0.53177 0.73392 -0.202147 9.9996e-01 1.9226e-05 weaklyHypometh 1.000000 0.009613 weaklyHypometh 0.99997420 0.0007258 weaklyHypometh 1.00000 0.33795 insignificant -0.2031373 8.7925e-03 lowCoverage 1.0000000 lowCoverage chr16 65436961 65437961 139011 CA7 ENSG00000168748 0.657309 193 5 0.585075 165 5 0.308242 92 5 0.684464 200 4 0.661062 64 5 0.6719602 262 5 0.462976 63 5 0.555130 160 5 0.4982350 135 5 0.6057141 129 5 0.679650 168 5 0.564919 57 5 0.198507 284 5 0.51564 106 4 0.511116 164 5 0.72535 33 2 0.455556 40 4 0.305113 275 4 0.53844 185 5 0.582892 183 5 0.747300 91 5 0.335265 142 4 0.577247 142 5 0.359764 120 5 0.35455 72 4 0.475686 176 5 0.570331 141 4 0.483341 87 5 0.58833 197 5 0.4204778 264 5 0.40176 155 5 0.76356 229 5 0.233696 213 5 0.626667 83 5 0.2916667 73 4 0.15833 18 1 0.62311 125 5 0.4578048 140 5 0.446211 190 5 0.482297 157 5 0.610754 232 4 0.62634 173 4 0.550810 185 4 0.648939 0.483038 0.320878 0.679461 0.670366 0.6505683 0.468792 0.499242 0.507306 0.7205562 0.608983 0.575298 0.207922 0.530794 0.497109 0.70068 0.376085 0.374762 0.54190 0.630836 0.7409646 0.3980119 0.636763 0.397431 0.3509792 0.495471 0.396686 0.384754 0.56829 0.416726 0.39924 0.74419 0.2294089 0.5882812 0.4863281 0.2724609 0.495264 0.498109 0.395198 0.473518 0.5314196 0.599531 0.454600 4 0.520622 0.504956 0.0148921 5 0.546369 0.470751 0.0756171 0.4318173 0.921242 insignificant 1 1 insignificant 0.266315 0.96835585 insignificant 1 1.00000 insignificant 0.03190085 0.548845 lowCoverage 1 lowCoverage 0.520622 0.403374 0.1184617 5 0.546369 0.381357 0.165011 7.4020e-04 9.9333e-01 weaklyHypermeth 1.4659e-02 1.0000e+00 weaklyHypermeth 1.9991e-03 9.5311e-01 weaklyHypermeth 5.5532e-02 1.0000e+00 weaklyHypermeth 0.1398207 1.5871e-01 lowCoverage 1.0000e+00 lowCoverage 0.520474 0.488794 0.0226213 5 0.522309 0.526014 -0.0037047 2.1538e-01 2.4791e-01 insignificant 1.0000e+00 1.000000 insignificant 2.0274e-01 0.41556536 insignificant 1.0000e+00 1.00000 insignificant -0.0049143 9.1856e-01 lowCoverage 1.0000e+00 lowCoverage 0.504956 0.403374 0.10222836 5 0.470751 0.381357 0.0893943 1.0927e-02 9.5195e-01 weaklyHypermeth 1.8211e-01 1.0000e+00 insignificant 2.0081e-02 9.0607e-01 weaklyHypermeth 3.7187e-01 1.0000e+00 insignificant 0.1079198 2.7694e-01 lowCoverage 1.0000e+00 lowCoverage 0.505804 0.488794 0.01078572 5 0.507759 0.526014 -0.0182548 3.8319e-01 1.0369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9161e-01 0.176344 insignificant 1.0000e+00 1 insignificant -0.0368151 5.1294e-01 lowCoverage 1.000000 lowCoverage 0.403698 0.488794 -0.098158 5 0.390962 0.526014 -0.1350517 9.7594e-01 4.4581e-02 weaklyHypometh 1.0000e+00 8.2558e-01 insignificant 9.1189e-01 4.0076e-02 weaklyHypometh 1.0000e+00 9.0347e-01 insignificant -0.1447350 1.5093e-01 lowCoverage 1.0000000 lowCoverage chr16 65988522 65989522 139037 TPPP3 ENSG00000159713 0.809408 226 7 0.721136 136 7 0.708129 119 7 0.874840 88 5 0.711905 67 5 0.6747250 230 7 0.800050 95 7 0.849878 170 8 0.6896981 137 7 0.6450886 116 6 0.922345 212 7 0.664674 87 5 0.785872 196 8 0.89683 21 3 0.799459 137 7 0.65561 38 5 0.576007 75 5 0.769130 132 7 0.78001 167 7 0.745981 212 7 0.792063 82 7 0.624056 84 7 0.808847 209 5 0.666631 55 5 0.75992 50 6 0.757092 184 8 0.667246 128 8 0.830842 85 6 0.77365 105 7 0.9058271 175 8 0.77192 180 8 0.72960 320 7 0.411583 180 7 0.425012 132 7 0.8000000 63 5 0.58514 94 5 0.47706 121 8 0.6352479 173 7 0.639322 161 7 0.658734 177 6 0.788196 176 5 0.77897 177 5 0.692609 152 5 0.849678 0.862673 0.817896 0.886752 0.844110 0.7379522 0.828206 0.898188 0.821243 0.8133607 0.882648 0.794279 0.819051 0.856400 0.915049 0.83907 0.745214 0.797067 0.93342 0.797970 0.8757889 0.7437212 0.848059 0.797623 0.8521945 0.913563 0.853823 0.903096 0.78922 0.878660 0.89124 0.84284 0.5079797 0.4947638 0.8882087 0.6869923 0.698796 0.793804 0.787950 0.830924 0.7708602 0.856167 0.840809 5 0.843550 0.840895 -0.0052003 7 0.664686 0.670314 -0.0056279 0.4900574 0.244653 insignificant 1 1 insignificant 0.625085 0.22838924 insignificant 1 1.00000 insignificant -0.00326884 0.915080 insignificant 1 insignificant 0.843550 0.601573 0.2161920 7 0.664686 0.467774 0.196912 2.5066e-13 9.9921e-01 hypermethylated 1.2533e-11 1.0000e+00 hypermethylated 1.2297e-04 9.9876e-01 hypermethylated 5.4503e-03 1.0000e+00 hypermethylated 0.1983649 2.0556e-02 weaklyHypermeth 4.8943e-01 insignificant 0.843550 0.827791 0.0294315 5 0.664686 0.734440 -0.0697536 4.6121e-04 2.7571e-01 weaklyHypermeth 2.0964e-02 1.000000 weaklyHypermeth 5.2995e-02 0.31037971 insignificant 1.0000e+00 1.00000 insignificant 0.0424732 2.8201e-01 insignificant 1.0000e+00 insignificant 0.840895 0.601573 0.23132977 7 0.670314 0.467774 0.2025403 2.1727e-09 1.0000e+00 hypermethylated 9.4323e-08 1.0000e+00 hypermethylated 1.8660e-04 9.9999e-01 hypermethylated 7.4641e-03 1.0000e+00 hypermethylated 0.2016337 1.9134e-02 weaklyHypermeth 4.5558e-01 insignificant 0.840895 0.827791 0.03741594 5 0.670314 0.734440 -0.0641257 1.4575e-04 9.2353e-01 weaklyHypermeth 8.5733e-03 1.0000e+00 weaklyHypermeth 2.4435e-02 0.858010 weaklyHypermeth 1.0000e+00 1 insignificant 0.0457420 2.6098e-01 insignificant 1.000000 insignificant 0.601573 0.827791 -0.173402 5 0.467774 0.734440 -0.2666660 9.8962e-01 5.1955e-03 weaklyHypometh 1.0000e+00 1.3672e-01 insignificant 9.9421e-01 1.0027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1558917 5.4464e-02 insignificant 1.0000000 insignificant chr16 67628846 67629846 139096 ENSG00000202497 0.882074 219 5 0.926149 96 5 0.840994 142 5 0.914918 99 5 0.919608 70 5 0.8512555 199 5 0.795612 124 5 0.929941 97 5 0.8791390 128 5 0.8487812 106 5 0.843734 165 5 0.974615 86 5 0.879351 105 5 NA 0 0 0.911177 116 5 0.87564 64 5 0.949143 104 5 0.863158 95 5 0.86541 113 5 0.813628 191 5 0.921569 68 5 0.833333 79 5 0.856756 107 5 0.845154 97 5 0.88929 38 5 0.861557 179 5 0.873038 57 5 0.799871 74 5 0.90441 84 5 0.8819210 195 5 0.83054 170 5 0.85254 318 5 0.906870 128 5 0.855556 54 5 0.8462482 200 5 0.76222 54 5 0.95893 92 5 0.7781866 194 5 0.850976 192 5 0.893712 170 5 0.922405 175 5 0.89359 190 5 0.897259 137 5 0.894523 0.927574 0.859523 0.921716 0.917667 0.8696719 0.809130 0.936331 0.889934 0.8613627 0.852942 0.977784 0.895892 NA 0.915809 0.88373 0.958262 0.877258 0.88182 0.826625 0.9281534 0.8429726 0.861883 0.843437 0.9064499 0.880731 0.877286 0.822866 0.91677 0.895235 0.85125 0.86608 0.9221259 0.8767176 0.8635893 0.8080431 0.966485 0.790293 0.861364 0.910547 0.9327398 0.903426 0.913631 5 0.877533 0.856071 0.0162697 5 0.870767 0.853454 0.0173129 0.0797346 0.804422 insignificant 1 1 insignificant 0.105663 0.69913103 insignificant 1 1.00000 insignificant 0.01983568 0.181061 lowCoverage 1 lowCoverage 0.877533 0.857341 0.0138952 5 0.870767 0.854201 0.016566 1.2923e-01 1.0551e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4734e-01 1.7176e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0309976 3.7345e-01 lowCoverage 1.0000e+00 lowCoverage 0.877533 0.901620 -0.0211210 5 0.870767 0.891656 -0.0208886 9.7002e-01 1.1132e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3361e-01 0.27412857 insignificant 1.0000e+00 1.00000 insignificant -0.0092565 5.6548e-01 lowCoverage 1.0000e+00 lowCoverage 0.856071 0.857341 -0.00040947 5 0.853454 0.854201 -0.0007465 2.7577e-01 6.3108e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0510e-01 4.5534e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0111620 7.3968e-01 insignificant 1.0000e+00 insignificant 0.856071 0.901620 -0.03811571 5 0.853454 0.891656 -0.0382016 9.9526e-01 3.9706e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6836e-01 0.121853 insignificant 1.0000e+00 1 insignificant -0.0290922 8.2879e-02 insignificant 1.000000 insignificant 0.857341 0.901620 -0.037198 5 0.854201 0.891656 -0.0374551 5.8587e-01 2.4319e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6117e-01 2.9911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0402542 2.6109e-01 insignificant 1.0000000 insignificant chr16 67711889 67712889 139098 HAS3 ENSG00000103044 0.988038 369 5 0.951250 567 5 0.920767 147 5 0.957470 274 5 0.938084 148 5 0.9547469 529 5 0.920395 285 5 0.970468 175 5 0.9588342 146 5 0.9278431 78 5 0.970408 394 5 0.952206 81 5 0.958528 121 5 0.93561 96 5 0.980543 146 5 0.96000 76 5 NA 0 0 0.978827 314 5 0.96471 576 5 0.961916 490 5 0.975000 44 5 1.000000 4 0 0.963275 253 5 1.000000 56 4 1.00000 6 0 0.976345 405 5 0.921612 92 5 0.904444 56 5 0.96701 395 5 0.9668410 464 5 0.96710 377 5 0.96015 420 5 0.957723 293 5 0.991389 217 5 0.9180000 332 5 1.00000 8 0 0.90109 303 5 0.9745285 432 5 0.970924 635 5 0.951159 418 5 0.974887 409 5 0.94542 374 5 0.967671 317 5 0.987597 0.950821 0.919814 0.958355 0.943549 0.9593662 0.924944 0.971120 0.960467 0.9354412 0.968799 0.962201 0.960242 0.945921 0.983244 0.94750 NA 0.980536 0.96889 0.964360 0.9671875 0.9732648 0.959733 1.000000 0.9875192 0.976206 0.932383 0.899583 0.96545 0.965212 0.96955 0.96421 0.9602415 0.9924306 0.9385000 0.9861727 0.906678 0.975280 0.965448 0.954944 0.9795107 0.938716 0.967642 4 0.959098 0.966174 -0.0071904 5 0.958159 0.966032 -0.0078735 0.9232048 0.112951 insignificant 1 1 insignificant 0.964490 0.07437578 insignificant 1 1.00000 insignificant -0.01151662 0.244791 lowCoverage 1 lowCoverage 0.959098 0.940063 0.0124851 5 0.958159 0.942747 0.015412 1.3682e-01 1.9204e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 9.0911e-01 6.2114e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0018250 9.1773e-01 lowCoverage 1.0000e+00 lowCoverage 0.959098 0.962343 -0.0033765 5 0.958159 0.960684 -0.0025250 7.2234e-01 3.4265e-01 insignificant 1.0000e+00 1.000000 insignificant 6.4272e-01 0.70106741 insignificant 1.0000e+00 1.00000 insignificant -0.0067154 3.8077e-01 lowCoverage 1.0000e+00 lowCoverage 0.966174 0.940063 0.01930599 5 0.966032 0.942747 0.0232851 1.6068e-01 3.1700e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8326e-01 3.1400e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0096917 6.1265e-01 lowCoverage 1.0000e+00 lowCoverage 0.966174 0.962343 0.00425281 5 0.966032 0.960684 0.0053485 2.8227e-01 7.7228e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1668e-01 0.938856 insignificant 1.0000e+00 1 insignificant 0.0048012 6.4640e-01 lowCoverage 1.000000 lowCoverage 0.940063 0.962343 -0.019841 5 0.942747 0.960684 -0.0179365 9.1353e-02 5.7849e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0872e-01 9.6544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048905 7.8674e-01 lowCoverage 1.0000000 lowCoverage chr16 69282968 69283968 139166 ENSG00000177242 0.930419 269 9 0.888332 341 9 0.897036 288 9 0.918935 238 9 0.878304 162 9 0.8699213 488 8 0.873400 232 9 0.946050 282 9 0.8754541 219 6 0.8338072 238 8 0.875272 374 9 0.922467 100 5 0.943847 266 9 0.96355 161 5 0.892070 234 8 0.91567 57 4 0.642857 20 2 0.847527 222 8 0.96108 330 9 0.852137 379 8 0.919232 184 9 0.786539 148 8 0.929425 240 9 0.973517 223 9 0.97773 104 6 0.893285 316 9 0.813265 264 9 0.724538 161 5 0.79855 281 8 0.9333166 405 9 0.88078 359 9 0.90204 418 9 0.306515 302 9 0.256585 228 9 0.3770845 260 7 0.37810 77 8 0.57709 281 9 0.2431405 365 9 0.808845 246 9 0.869738 225 9 0.918155 173 4 0.80573 197 6 0.620504 192 9 0.916616 0.820693 0.859855 0.933762 0.855037 0.9111189 0.869011 0.932237 0.886279 0.8953004 0.885459 0.894754 0.916253 0.931740 0.900792 0.82989 0.772708 0.860455 0.94596 0.911914 0.9156987 0.8312288 0.908548 0.963411 0.9538354 0.902135 0.811282 0.797705 0.81879 0.907164 0.83168 0.92039 0.4036497 0.3726982 0.4398274 0.6128992 0.620025 0.345509 0.878658 0.909116 0.8853260 0.857020 0.647309 4 0.901224 0.895161 0.0054396 9 0.906678 0.901613 0.0050656 0.4212402 0.616853 insignificant 1 1 insignificant 0.427462 0.71654378 insignificant 1 1.00000 insignificant 0.00872159 0.755354 insignificant 1 insignificant 0.901224 0.356246 0.5388440 9 0.906678 0.324325 0.582353 9.6664e-73 1.0000e+00 hypermethylated 4.8332e-70 1.0000e+00 hypermethylated 1.7986e-16 1.0000e+00 hypermethylated 5.9954e-14 1.0000e+00 hypermethylated 0.5299873 5.5111e-05 hypermethylated 6.1235e-03 hypermethylated 0.901224 0.847047 0.0574541 9 0.906678 0.804919 0.1017589 3.8042e-10 9.5972e-01 weaklyHypermeth 3.8042e-08 1.000000 weaklyHypermeth 1.2886e-03 0.77876058 weaklyHypermeth 8.5905e-02 1.00000 weaklyHypermeth 0.0818129 1.8480e-01 insignificant 1.0000e+00 insignificant 0.895161 0.356246 0.53386742 9 0.901613 0.324325 0.5772873 2.2179e-46 1.0000e+00 hypermethylated 1.1089e-43 1.0000e+00 hypermethylated 2.4952e-15 1.0000e+00 hypermethylated 1.2476e-12 1.0000e+00 hypermethylated 0.5212657 2.5536e-05 hypermethylated 2.8374e-03 hypermethylated 0.895161 0.847047 0.05677633 9 0.901613 0.804919 0.0966933 1.1636e-05 8.7368e-01 weaklyHypermeth 1.0576e-03 1.0000e+00 weaklyHypermeth 7.7811e-03 0.746181 weaklyHypermeth 3.8905e-01 1 insignificant 0.0730913 2.3802e-01 insignificant 1.000000 insignificant 0.356246 0.847047 -0.431363 9 0.324325 0.804919 -0.4805940 1.0000e+00 3.9010e-18 hypomethylated 1.0000e+00 7.8019e-16 hypomethylated 1.0000e+00 7.1701e-09 hypomethylated 1.0000e+00 2.3900e-06 hypomethylated -0.4481744 1.4907e-04 hypomethylated 0.0149066 hypomethylated chr16 69306896 69307896 139168 ENSG00000177242 0.790476 50 7 0.657785 196 9 0.793769 147 9 0.879630 81 8 0.824641 59 3 0.7310241 96 8 0.864187 92 5 0.658000 52 5 0.8461111 48 5 0.8600000 38 5 0.851667 150 5 0.747619 29 2 0.771538 40 3 0.93333 15 3 0.758882 61 5 0.97500 42 4 0.723077 18 2 0.797110 60 7 0.61750 61 3 0.771561 62 7 0.856044 46 4 0.937500 14 1 0.840445 82 9 0.925000 27 2 0.79255 111 3 0.834463 195 9 0.859091 40 3 0.811111 13 2 0.79167 39 2 0.7395727 218 9 0.83962 164 9 0.82005 80 8 0.210277 239 9 0.237619 73 5 0.7487184 140 5 0.18750 9 1 0.85667 66 4 0.1692312 208 9 0.748484 100 8 0.723485 69 6 0.840440 120 8 0.77835 86 7 0.473140 68 8 0.868464 0.655483 0.875602 0.882075 0.831046 0.8919869 0.869750 0.654717 0.867925 0.8962264 0.829560 0.606469 0.791001 0.818537 0.770011 0.96226 0.853376 0.815675 0.76893 0.744834 0.9017209 0.9716981 0.846948 0.924528 0.7540527 0.803580 0.710120 0.742154 0.77044 0.792977 0.80698 0.91096 0.4920952 0.2769542 0.6009234 0.2945718 0.827830 0.500405 0.920272 0.744425 0.8128813 0.764484 0.597653 0 0.788117 0.835763 -0.0330876 5 0.769388 0.818982 -0.0495938 0.9589778 0.163744 insignificant 1 1 insignificant 0.991980 0.23277053 insignificant 1 1.00000 insignificant -0.04461391 0.094040 insignificant 1 insignificant 0.788117 0.380952 0.4105772 5 0.769388 0.260419 0.508969 4.1260e-25 1.0000e+00 hypermethylated 4.1260e-23 1.0000e+00 hypermethylated 2.7375e-06 1.0000e+00 hypermethylated 1.8250e-04 1.0000e+00 hypermethylated 0.3909769 2.7667e-02 weaklyHypermeth 5.7640e-01 insignificant 0.788117 0.776524 0.0203462 4 0.769388 0.717636 0.0517524 7.7981e-03 4.2459e-01 lowCoverage 3.2492e-01 1.000000 lowCoverage 1.0647e-02 0.45844879 lowCoverage 5.6037e-01 1.00000 lowCoverage 0.0798657 2.8311e-01 insignificant 1.0000e+00 insignificant 0.835763 0.380952 0.43702633 8 0.818982 0.260419 0.5585632 6.4774e-21 1.0000e+00 hypermethylated 7.1971e-19 1.0000e+00 hypermethylated 2.2399e-06 1.0000e+00 hypermethylated 1.7230e-04 1.0000e+00 hypermethylated 0.4355908 1.8785e-02 weaklyHypermeth 4.5558e-01 insignificant 0.835763 0.776524 0.05126583 7 0.818982 0.717636 0.1013463 4.3492e-03 9.4694e-01 weaklyHypermeth 1.6728e-01 1.0000e+00 insignificant 4.7605e-03 0.988356 weaklyHypermeth 2.8003e-01 1 insignificant 0.1244796 1.1973e-01 insignificant 1.000000 insignificant 0.380952 0.776524 -0.423373 7 0.260419 0.717636 -0.4572169 1.0000e+00 3.9745e-10 hypomethylated 1.0000e+00 3.9745e-08 hypomethylated 9.9963e-01 1.0666e-02 weaklyHypometh 1.0000e+00 3.2323e-01 insignificant -0.3111111 6.4452e-02 insignificant 1.0000000 insignificant chr16 70595971 70596971 139194 PKD1L3 ENSG00000187008 0.918367 97 6 0.824447 80 6 0.722222 34 3 0.844108 121 6 0.785714 19 1 0.8103175 88 6 0.585034 36 4 0.585417 47 3 0.4166667 44 4 0.5681818 43 4 0.839239 89 6 0.500000 11 1 0.583333 28 4 0.65000 28 4 0.650000 26 4 0.37500 10 0 0.666667 9 0 0.844444 25 3 0.82963 57 6 0.785714 45 6 0.812500 12 0 0.666667 6 0 0.722222 17 0 0.666667 21 3 0.80952 33 3 0.844227 78 6 0.640000 18 3 0.714286 16 1 0.73469 34 3 0.7930283 79 6 0.77597 64 6 0.69632 91 6 0.594211 84 7 0.553571 37 6 0.7409091 35 3 0.92593 54 3 0.67667 42 7 0.6615741 74 6 0.905556 57 3 0.853175 80 6 0.875000 46 6 0.61667 33 3 0.907895 69 3 0.809524 0.740741 0.851852 0.746187 1.000000 0.6428571 0.476190 0.780556 0.555556 0.7575758 0.752552 1.000000 0.777778 0.866667 0.866667 0.50000 0.666667 0.688889 0.73333 0.761905 0.8333333 0.6666667 0.666667 0.666667 0.6666667 0.725490 0.733333 0.666667 0.71429 0.777778 0.58528 0.72549 0.7818627 0.6250000 0.8151515 NA 0.822222 0.703704 0.833333 0.722222 0.7500000 0.333333 0.833333 0 0.741416 0.769397 0.0398083 6 0.723672 0.688508 0.0351631 0.0088841 0.983560 weaklyHypermeth 1 1 insignificant 0.099838 0.84575326 insignificant 1 1.00000 insignificant -0.05045068 0.213066 lowCoverage 1 lowCoverage 0.739594 0.709877 0.0743615 6 0.636930 0.608907 0.028023 1.8282e-03 9.4381e-01 weaklyHypermeth 3.0987e-02 1.0000e+00 weaklyHypermeth 3.6819e-02 9.9144e-01 weaklyHypermeth 5.9385e-01 1.0000e+00 insignificant -0.0029179 9.6458e-01 lowCoverage 1.0000e+00 lowCoverage 0.827545 0.919298 -0.0194230 3 0.844284 0.862760 -0.0184761 7.7635e-01 8.1324e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.3760e-01 0.10745927 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.1424332 6.0746e-02 lowCoverage 1.0000e+00 lowCoverage 0.767094 0.714286 0.03761196 6 0.664945 0.685020 -0.0200749 5.5540e-02 2.1771e-01 insignificant 7.8226e-01 1.0000e+00 insignificant 4.8261e-02 3.7027e-01 weaklyHypermeth 7.9116e-01 1.0000e+00 insignificant 0.0475328 4.3612e-01 lowCoverage 1.0000e+00 lowCoverage 0.789823 0.919298 -0.06119172 3 0.803260 0.862760 -0.0594998 9.3196e-01 3.4910e-03 lowCoverage 1.0000e+00 7.1695e-01 lowCoverage 5.9866e-01 0.056398 lowCoverage 1.0000e+00 1 lowCoverage -0.0919825 1.7322e-01 lowCoverage 1.000000 lowCoverage 0.745098 0.919298 -0.155373 3 0.746693 0.862760 -0.1160666 8.6583e-01 2.1781e-03 lowCoverage 1.0000e+00 6.8066e-02 lowCoverage 7.7391e-01 4.0719e-03 lowCoverage 1.0000e+00 1.4543e-01 lowCoverage -0.1395153 1.0303e-01 lowCoverage 1.0000000 lowCoverage chr16 71208876 71209876 139293 ENSG00000221286 0.818190 542 18 0.810952 221 12 0.869643 174 13 0.897038 481 18 0.873283 124 11 0.8403157 568 18 0.775375 183 11 0.853666 140 11 0.8529602 107 8 0.8936128 128 11 0.854507 439 18 0.738500 91 6 0.822709 145 10 NA 0 0 0.860568 181 14 0.86832 91 7 0.755266 110 8 0.871445 525 18 0.90201 165 12 0.808947 517 18 0.806300 89 10 0.886004 183 11 0.842196 238 18 0.881601 104 9 0.92752 153 14 0.875876 281 17 0.935363 112 11 0.905772 76 7 0.88851 157 13 0.8904941 322 17 0.83161 275 17 0.89835 663 18 0.609360 196 14 0.788137 180 11 0.8366198 333 17 0.89883 96 8 0.85733 121 11 0.7831911 376 18 0.912973 446 18 0.823145 605 18 0.843578 424 18 0.87907 381 18 0.861755 527 18 0.834650 0.826907 0.836155 0.941250 0.886026 0.8473735 0.790759 0.850055 0.786996 0.9287322 0.846913 0.751546 0.807505 NA 0.886349 0.83975 0.792841 0.872903 0.83444 0.879188 0.8122953 0.8267861 0.859810 0.841160 0.9108702 0.877328 0.904511 0.859913 0.86585 0.901147 0.83143 0.90508 0.7218172 0.7652606 0.8824277 0.8854950 0.858231 0.802984 0.908982 0.867939 0.8483626 0.897692 0.839438 4 0.853001 0.872974 -0.0215670 17 0.836150 0.888272 -0.0521217 0.9997850 0.020663 weaklyHypometh 1 1 insignificant 0.999810 0.03529067 weaklyHypometh 1 1.00000 insignificant -0.04041452 0.013429 weaklyHypometh 1 insignificant 0.852965 0.793395 0.0579755 17 0.845219 0.781662 0.063557 4.6351e-09 9.9930e-01 weaklyHypermeth 1.7827e-07 1.0000e+00 weaklyHypermeth 1.4229e-03 9.5131e-01 weaklyHypermeth 4.1851e-02 1.0000e+00 weaklyHypermeth 0.0448070 3.3561e-01 insignificant 1.0000e+00 insignificant 0.852965 0.888376 -0.0217301 17 0.845219 0.865159 -0.0199405 9.8607e-01 9.2707e-02 insignificant 1.0000e+00 1.000000 insignificant 8.6703e-01 0.30428987 insignificant 1.0000e+00 1.00000 insignificant -0.0237182 2.3889e-01 insignificant 1.0000e+00 insignificant 0.872830 0.793395 0.07651280 17 0.876511 0.781662 0.0948494 7.5477e-11 1.0000e+00 weaklyHypermeth 3.7738e-09 1.0000e+00 weaklyHypermeth 7.2443e-06 9.9882e-01 weaklyHypermeth 4.2614e-04 1.0000e+00 weaklyHypermeth 0.0852215 9.5182e-02 insignificant 1.0000e+00 insignificant 0.872830 0.888376 0.00173601 17 0.876511 0.865159 0.0113519 2.2672e-01 7.3211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1660e-01 0.978937 insignificant 1.0000e+00 1 insignificant 0.0166963 4.0061e-01 insignificant 1.000000 insignificant 0.793395 0.888376 -0.077059 17 0.781662 0.865159 -0.0834975 9.9917e-01 3.7719e-07 weaklyHypometh 1.0000e+00 2.5146e-05 weaklyHypometh 9.7905e-01 3.4058e-03 weaklyHypometh 1.0000e+00 1.4504e-01 insignificant -0.0685252 1.6795e-01 insignificant 1.0000000 insignificant chr16 71436268 71437268 139337 ENSG00000221286 0.840152 87 6 0.830470 193 6 0.668285 54 4 0.881016 59 3 0.864683 46 4 0.9488376 178 4 0.916667 17 2 0.851781 104 6 0.7898893 60 6 0.9407407 42 3 0.882792 261 6 0.738889 24 2 0.886608 85 6 1.00000 15 3 0.922530 82 5 0.67949 26 3 0.543155 20 2 0.851852 43 3 0.83929 120 6 0.947666 159 3 0.972222 33 3 1.000000 23 3 0.946371 89 6 0.969975 61 4 1.00000 15 2 0.873160 131 6 0.769994 61 3 0.738928 37 3 0.73039 79 6 0.8942019 137 4 0.98114 134 6 0.93834 143 6 0.971726 105 4 0.957418 78 5 1.0000000 159 5 1.00000 24 3 0.95873 66 5 0.9671717 108 4 0.745040 30 3 0.949928 40 3 0.817387 49 3 0.94444 15 2 0.888312 33 3 0.894656 0.887267 0.821366 0.876827 0.784372 0.9062083 0.990909 0.939280 0.893051 0.9167677 0.862855 0.732121 0.859129 0.973376 0.897952 0.71742 0.789122 0.820202 0.82918 0.949462 0.9848485 0.9929877 0.921427 0.968984 0.9951614 0.988052 0.834848 0.853910 0.82357 0.968329 0.97135 0.89826 0.9392857 0.9464702 1.0000000 1.0000000 0.973853 0.985354 0.681602 0.908194 0.9074380 0.934091 0.881377 1 0.869254 0.921444 -0.0410000 4 0.919752 0.898010 0.0217422 0.9884867 0.123989 lowCoverage 1 1 lowCoverage 0.996615 0.06985356 lowCoverage 1 1.00000 lowCoverage -0.05998763 0.130329 lowCoverage 1 lowCoverage 0.869254 0.974074 -0.1028460 6 0.919752 0.984862 -0.065110 1.0000e+00 2.0694e-04 weaklyHypometh 1.0000e+00 2.2994e-02 weaklyHypometh 1.0000e+00 1.3621e-03 weaklyHypometh 1.0000e+00 1.5135e-01 insignificant -0.1346017 3.4848e-05 lowCoverage 4.3560e-03 lowCoverage 0.869254 0.850299 0.0356096 3 0.919752 0.865020 0.0547318 3.0858e-01 9.7022e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.4585e-01 0.91146399 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0277829 5.6642e-01 lowCoverage 1.0000e+00 lowCoverage 0.921444 0.974074 -0.05262586 4 0.898010 0.984862 -0.0868519 1.0000e+00 6.7563e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.0000e+00 2.7661e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0746141 2.9032e-02 lowCoverage 6.3114e-01 lowCoverage 0.921444 0.850299 0.06622322 3 0.898010 0.865020 0.0329896 1.5506e-01 9.9906e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.4206e-01 0.999478 lowCoverage 1.0000e+00 1 lowCoverage 0.0322047 5.2672e-01 lowCoverage 1.000000 lowCoverage 0.974074 0.850299 0.129140 3 0.984862 0.865020 0.1198415 4.1701e-02 1.0000e+00 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.6476e-01 1.0000e+00 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1068188 5.1133e-02 lowCoverage 1.0000000 lowCoverage chr16 71538753 71539753 139353 ENSG00000221286 0.811748 481 10 0.791397 333 10 0.758707 264 10 0.851634 482 10 0.756028 157 10 0.8670138 536 10 0.739384 223 9 0.793429 346 10 0.7639961 335 9 0.8539217 213 7 0.788944 481 10 0.806185 108 7 0.335564 370 10 0.82573 137 9 0.660166 272 10 0.70856 91 9 0.533036 78 7 0.534541 450 10 0.61149 304 10 0.674703 385 10 0.778704 148 10 0.404070 213 10 0.845857 330 11 0.750196 181 10 0.72287 150 9 0.811618 403 11 0.666858 229 10 0.786238 161 9 0.74840 293 10 0.7668987 424 11 0.48034 395 10 0.84614 567 11 0.384010 318 10 0.595939 147 10 0.8219697 333 7 0.67778 47 7 0.50814 329 10 0.8184961 490 11 0.282464 474 11 0.494217 442 11 0.482858 495 10 0.23280 330 10 0.484669 427 10 0.807587 0.719616 0.752744 0.774731 0.774211 0.8191087 0.837760 0.754312 0.744661 0.8332637 0.852919 0.792475 0.367202 0.788233 0.716477 0.80453 0.518389 0.511905 0.58357 0.727096 0.8824762 0.3204266 0.824470 0.807483 0.7694807 0.779030 0.732789 0.829561 0.73654 0.755236 0.53378 0.90086 0.4634323 0.5901648 0.6485501 0.6410776 0.487210 0.761645 0.261173 0.361575 0.4991938 0.234251 0.487111 7 0.729439 0.735513 -0.0097364 10 0.673781 0.648152 0.0256286 0.8050346 0.361927 insignificant 1 1 insignificant 0.913544 0.35443993 insignificant 1 1.00000 insignificant 0.00595956 0.906114 insignificant 1 insignificant 0.729515 0.656851 0.0833435 10 0.686194 0.670345 0.015849 5.1365e-04 7.9947e-01 weaklyHypermeth 1.0929e-02 1.0000e+00 weaklyHypermeth 8.0376e-03 9.5020e-01 weaklyHypermeth 1.8542e-01 1.0000e+00 insignificant 0.0889205 2.8668e-01 insignificant 1.0000e+00 insignificant 0.729533 0.393170 0.3513777 9 0.781188 0.405107 0.3760812 1.7279e-28 1.0000e+00 hypermethylated 1.7279e-25 1.000000 hypermethylated 6.1034e-16 1.00000000 hypermethylated 6.1034e-13 1.00000 hypermethylated 0.3279072 1.8084e-03 weaklyHypermeth 3.6168e-01 insignificant 0.735725 0.656851 0.08975222 10 0.694449 0.670345 0.0241038 2.2926e-03 8.3964e-01 weaklyHypermeth 4.5329e-02 1.0000e+00 weaklyHypermeth 1.6275e-02 9.7498e-01 weaklyHypermeth 3.1297e-01 1.0000e+00 insignificant 0.0829609 3.3738e-01 insignificant 1.0000e+00 insignificant 0.735751 0.392774 0.36672055 9 0.706023 0.360550 0.3454732 2.3371e-23 1.0000e+00 hypermethylated 2.3371e-20 1.0000e+00 hypermethylated 3.3773e-14 1.000000 hypermethylated 3.3773e-11 1 hypermethylated 0.3219477 1.5670e-03 weaklyHypermeth 0.374605 insignificant 0.656231 0.392774 0.275022 10 0.615402 0.360550 0.2548521 2.1782e-09 1.0000e+00 hypermethylated 7.2606e-07 1.0000e+00 hypermethylated 3.4122e-05 9.9998e-01 hypermethylated 1.1374e-02 1.0000e+00 hypermethylated 0.2389868 2.7671e-02 weaklyHypermeth 0.7478716 insignificant chr16 71591240 71592240 139363 ENSG00000221799 0.834761 410 5 0.775475 366 6 0.752343 226 5 0.658259 388 5 0.786492 165 5 0.9327951 415 5 0.676788 223 5 0.837163 229 5 0.8824835 354 5 0.5392494 191 5 0.895592 229 5 0.875790 157 5 0.602210 274 5 0.88140 135 5 0.696922 283 5 0.71167 181 5 0.751562 57 4 0.605325 450 5 0.84386 200 5 0.909526 317 5 0.764456 68 5 0.581781 193 5 0.836994 246 5 0.622741 89 5 0.69421 141 5 0.901995 300 5 0.717138 181 5 0.906785 120 5 0.60300 238 5 0.8736866 379 5 0.84817 334 6 0.92588 345 5 0.321351 263 5 0.669818 110 5 0.4347646 170 4 0.18254 56 5 0.23559 272 5 0.3232620 322 5 0.514344 355 5 0.525958 336 5 0.632915 555 5 0.66799 396 5 0.502724 344 5 0.809738 0.784569 0.748751 0.827496 0.874730 0.9077809 0.824954 0.810290 0.866327 0.8867491 0.853641 0.864879 0.726817 0.863552 0.832934 0.93087 0.736266 0.643152 0.83291 0.894865 0.8684012 0.5809944 0.821463 0.754383 0.7751019 0.881144 0.765520 0.889121 0.71640 0.859364 0.81799 0.89543 0.3824780 0.7542334 0.6483268 0.1834195 0.384304 0.395558 0.628502 0.627268 0.6375473 0.671428 0.609107 5 0.826079 0.819666 0.0053118 5 0.740322 0.658603 0.0817197 0.2062661 0.848738 insignificant 1 1 insignificant 0.268123 0.97392091 insignificant 1 1.00000 insignificant -0.00058628 0.989633 insignificant 1 insignificant 0.825639 0.458508 0.3677966 5 0.685842 0.304854 0.380989 2.6313e-21 1.0000e+00 hypermethylated 2.1928e-19 1.0000e+00 hypermethylated 2.3815e-06 1.0000e+00 hypermethylated 1.7010e-04 1.0000e+00 hypermethylated 0.4112620 1.3156e-03 lowCoverage 5.9801e-02 lowCoverage 0.826894 0.638973 0.1731228 5 0.820430 0.527964 0.2924658 6.8287e-18 1.0000e+00 weaklyHypermeth 2.2762e-15 1.000000 weaklyHypermeth 3.2046e-11 1.00000000 weaklyHypermeth 1.0682e-08 1.00000 weaklyHypermeth 0.2036978 9.2934e-04 hypermethylated 2.8621e-01 insignificant 0.819666 0.459278 0.36370764 5 0.658603 0.342960 0.3156424 1.1402e-12 1.0000e+00 hypermethylated 7.1262e-11 1.0000e+00 hypermethylated 7.9295e-05 9.9999e-01 hypermethylated 3.4476e-03 1.0000e+00 hypermethylated 0.4118483 9.6187e-04 lowCoverage 4.5158e-02 lowCoverage 0.821089 0.638973 0.16821652 5 0.811470 0.527964 0.2835062 5.8501e-11 1.0000e+00 weaklyHypermeth 1.1700e-08 1.0000e+00 weaklyHypermeth 1.0329e-08 1.000000 weaklyHypermeth 3.4431e-06 1 weaklyHypermeth 0.2042841 1.3619e-03 weaklyHypermeth 0.374605 insignificant 0.459983 0.638973 -0.192683 5 0.373947 0.527964 -0.1540170 9.9816e-01 1.4618e-02 weaklyHypometh 1.0000e+00 3.3222e-01 insignificant 9.9868e-01 1.7881e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.2075642 3.3259e-02 lowCoverage 0.8528003 lowCoverage chr16 71606723 71607723 139367 ENSG00000221799 0.897802 79 5 0.811706 62 5 0.874183 52 4 0.914444 75 5 0.728070 42 2 0.9553360 104 5 0.400000 21 2 0.966667 92 5 0.8380952 36 4 0.9538462 52 4 0.864905 169 5 0.821429 16 2 0.897259 101 5 0.69561 64 4 0.960000 75 4 1.00000 12 0 NA 0 0 0.962500 84 3 0.91451 99 5 0.927267 65 5 0.938971 38 2 0.888523 41 3 0.800000 20 1 0.852564 40 3 0.97143 19 2 0.937185 128 5 0.888636 48 3 0.750000 11 0 0.92292 146 5 0.9422106 130 5 0.92777 103 5 0.92255 91 5 0.950866 61 5 0.956140 58 4 0.9310345 59 2 1.00000 3 0 0.96424 60 3 0.9925926 87 5 0.948235 44 3 0.946170 92 4 0.881955 86 4 0.75000 9 0 0.984615 70 5 0.909392 0.777943 0.844590 0.918210 0.543860 0.9331357 0.472222 0.948148 0.822751 0.9658120 0.887009 0.841270 0.913793 0.801170 0.961111 1.00000 NA 0.972222 0.91176 0.941456 0.9048203 0.9146752 0.805556 0.972222 0.9603175 0.931111 0.978376 0.611111 0.97166 0.978585 0.91778 0.92803 0.9671717 0.9608512 0.9396977 0.9822381 0.962963 1.000000 0.930065 0.949160 0.9222870 0.662495 0.974359 0 0.885385 0.916564 -0.0295348 5 0.903125 0.930569 -0.0274437 0.9306691 0.066816 insignificant 1 1 insignificant 0.975826 0.17957138 insignificant 1 1.00000 insignificant -0.03293302 0.378642 lowCoverage 1 lowCoverage 0.885296 0.951220 -0.0660620 5 0.883750 0.949980 -0.066230 9.9922e-01 1.3352e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9960e-01 2.5290e-03 weaklyHypometh 1.0000e+00 2.5290e-01 insignificant -0.1035161 5.3908e-03 lowCoverage 1.8589e-01 lowCoverage 0.885296 0.940199 -0.0574247 4 0.883750 0.939692 -0.0559414 9.9331e-01 6.1309e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9771e-01 0.06742896 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0398986 4.6353e-01 lowCoverage 1.0000e+00 lowCoverage 0.916153 0.951220 -0.03877569 5 0.916682 0.949980 -0.0332978 8.6633e-01 4.5193e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4902e-01 6.3235e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0705831 4.8852e-03 lowCoverage 1.5759e-01 lowCoverage 0.916153 0.940199 -0.01051881 4 0.916682 0.939692 -0.0230090 8.7020e-01 3.0005e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3809e-01 0.348010 lowCoverage 1.0000e+00 1 lowCoverage -0.0069656 8.8364e-01 lowCoverage 1.000000 lowCoverage 0.951220 0.940199 0.010927 4 0.949980 0.939692 0.0102887 1.2484e-01 8.2816e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3560e-01 7.7889e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0636175 2.0350e-01 lowCoverage 1.0000000 lowCoverage chr16 71618720 71619720 139371 ENSG00000221799 0.784392 379 8 0.801775 286 9 0.734802 301 9 0.714700 210 9 0.859562 195 9 0.6389945 296 9 0.838371 239 9 0.797194 185 8 0.7010122 199 9 0.8464201 268 9 0.876384 316 9 0.539302 154 8 0.659607 202 8 0.75905 92 5 0.889497 246 8 0.74130 116 8 0.646402 51 4 0.746164 309 3 0.86235 262 8 0.729367 249 9 0.873569 110 10 0.766981 113 6 0.721769 232 9 0.855909 98 9 0.90476 144 8 0.813360 352 9 0.818491 224 9 0.858245 150 9 0.70538 198 9 0.8034557 367 9 0.83807 330 9 0.85236 263 9 0.892498 213 9 0.846392 125 8 0.8832846 252 8 0.84172 89 8 0.67085 212 9 0.7242950 346 9 0.739486 309 7 0.756341 320 9 0.683906 361 9 0.46532 272 7 0.675554 125 4 0.784038 0.813363 0.782840 0.789762 0.849985 0.6936275 0.809291 0.811425 0.776877 0.8201113 0.871297 0.640941 0.767562 0.777652 0.872877 0.74029 0.694030 0.818463 0.89223 0.750520 0.8970235 0.7407594 0.798563 0.955863 0.9178518 0.836004 0.805859 0.864863 0.72001 0.875813 0.84169 0.82315 0.9020990 0.7865212 0.8167019 0.8164640 0.805444 0.656690 0.805004 0.750185 0.6322454 0.508178 0.686777 6 0.814709 0.829911 -0.0157052 9 0.799214 0.815276 -0.0160617 0.9121732 0.436746 insignificant 1 1 insignificant 0.996628 0.15469056 insignificant 1 1.00000 insignificant -0.05936240 0.035900 weaklyHypometh 1 insignificant 0.814668 0.793856 0.0226139 9 0.782482 0.725607 0.056874 9.9723e-03 1.3007e-02 weaklyHypermeth 1.4884e-01 1.0000e+00 insignificant 5.1891e-01 5.2027e-04 inconclusive 1.0000e+00 7.4324e-02 inconclusive -0.0515077 2.5787e-01 insignificant 1.0000e+00 insignificant 0.815917 0.673396 0.1307352 8 0.798978 0.714173 0.0848053 2.8002e-07 9.8932e-01 weaklyHypermeth 2.3335e-05 1.000000 weaklyHypermeth 3.6923e-04 0.93731014 weaklyHypermeth 3.0769e-02 1.00000 weaklyHypermeth 0.0942109 1.4979e-01 insignificant 1.0000e+00 insignificant 0.829845 0.793856 0.03901143 9 0.799882 0.725607 0.0742744 4.7989e-02 3.4641e-02 weaklyHypermeth 6.9550e-01 1.0000e+00 insignificant 3.5131e-01 1.4720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0078547 8.5313e-01 insignificant 1.0000e+00 insignificant 0.829705 0.673396 0.14725009 8 0.779858 0.714173 0.0656854 5.2534e-08 9.5291e-01 weaklyHypermeth 7.5048e-06 1.0000e+00 weaklyHypermeth 2.2093e-06 0.997362 weaklyHypermeth 3.6822e-04 1 weaklyHypermeth 0.1535733 3.8791e-02 weaklyHypermeth 1.000000 insignificant 0.794165 0.673396 0.086489 8 0.720729 0.714173 0.0065561 3.3464e-04 9.9888e-01 weaklyHypermeth 4.1830e-02 1.0000e+00 weaklyHypermeth 6.9431e-04 9.9951e-01 weaklyHypermeth 1.7358e-01 1.0000e+00 insignificant 0.1457186 5.4057e-02 insignificant 1.0000000 insignificant chr16 71627228 71628228 139376 ENSG00000221799 0.010000 98 4 0.028571 149 5 0.042143 103 5 0.041667 49 3 0.053500 82 5 0.0074074 116 5 0.021844 153 5 0.011765 105 5 0.0111111 84 4 0.0072464 88 5 0.012000 174 5 0.014815 98 5 0.016000 99 4 0.00000 8 0 0.027485 115 5 0.00000 108 5 0.046875 57 4 0.050649 70 4 0.00000 108 5 0.012821 100 5 0.026667 86 5 0.013889 43 2 0.060460 68 5 0.027778 41 4 0.16944 128 2 0.018182 136 5 0.042857 54 5 0.050000 35 4 0.00000 62 5 0.0084295 151 5 0.00000 144 5 0.00000 114 5 0.737995 55 5 0.958683 79 6 0.9166667 90 3 0.70968 63 2 0.94643 32 4 0.6496429 90 5 0.014787 99 4 0.017778 107 3 0.000000 92 2 0.00000 30 3 0.082478 115 4 0.010753 0.030722 0.040323 0.027031 0.088495 0.0079650 0.031000 0.012650 0.011947 0.0093502 0.012903 0.044604 0.017204 0.012526 0.019996 0.00000 0.029720 0.023460 0.00000 0.016543 0.0071685 0.0071685 0.044771 0.035842 0.0021505 0.011730 0.046083 0.055677 0.00000 0.017479 0.00000 0.00000 0.6152593 0.9528327 0.9252851 0.6878252 0.894009 0.521932 0.026087 0.019116 0.0000000 0.000000 0.050137 1 0.021385 0.018850 0.0028710 5 0.024007 0.060630 -0.0366228 0.8038426 0.737748 insignificant 1 1 insignificant 0.768476 0.92707993 insignificant 1 1.00000 insignificant -0.01401390 0.338706 lowCoverage 1 lowCoverage 0.021407 0.843521 -0.8160763 5 0.028008 0.853772 -0.825764 1.0000e+00 3.7208e-77 hypomethylated 1.0000e+00 1.8604e-74 hypomethylated 1.0000e+00 1.9137e-15 hypomethylated 1.0000e+00 9.5685e-13 hypomethylated -0.7990541 2.7490e-05 lowCoverage 4.3560e-03 lowCoverage 0.021407 0.033860 -0.0070148 3 0.028008 0.025525 0.0024825 7.4120e-01 7.8636e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.0639e-01 0.95436500 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0022136 8.9462e-01 lowCoverage 1.0000e+00 lowCoverage 0.018868 0.843521 -0.81512153 5 0.070734 0.853772 -0.7830373 1.0000e+00 3.7754e-53 hypomethylated 1.0000e+00 1.8877e-50 hypomethylated 1.0000e+00 4.1453e-12 hypomethylated 1.0000e+00 2.0726e-09 hypomethylated -0.7850402 1.5773e-05 lowCoverage 1.9716e-03 lowCoverage 0.018868 0.033860 -0.01425496 3 0.070734 0.025525 0.0452091 6.9676e-01 5.5700e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5232e-01 0.878779 lowCoverage 1.0000e+00 1 lowCoverage 0.0118003 5.7618e-01 lowCoverage 1.000000 lowCoverage 0.843521 0.033860 0.773860 3 0.853772 0.025525 0.8282464 6.3045e-25 1.0000e+00 lowCoverage 3.1522e-22 1.0000e+00 lowCoverage 1.2201e-06 1.0000e+00 lowCoverage 6.1004e-04 1.0000e+00 lowCoverage 0.7968405 1.2462e-05 lowCoverage 0.0034625 lowCoverage chr16 71627659 71628659 139377 ENSG00000221799 0.019086 129 5 0.028195 187 6 0.046230 118 6 0.036250 99 4 0.044583 99 6 0.0061728 172 6 0.018203 173 6 0.009804 111 6 0.0092593 90 5 0.0062112 91 5 0.013268 225 6 0.012346 100 5 0.013333 101 4 0.00000 11 0 0.022904 118 5 0.00000 110 5 0.046875 57 4 0.042208 81 5 0.00000 114 6 0.020206 131 6 0.022222 92 6 0.011111 44 2 0.050384 84 6 0.023810 50 5 0.14524 140 3 0.015152 172 6 0.035714 59 6 0.041667 37 4 0.00000 64 5 0.0070245 176 6 0.00000 178 6 0.00000 166 6 0.731663 75 6 0.964586 80 6 0.9166667 90 3 0.76774 71 3 0.95536 53 5 0.7080357 106 6 0.031553 177 5 0.040239 166 4 0.019444 212 3 0.00000 31 3 0.096119 188 5 0.014011 0.030455 0.041919 0.026605 0.083131 0.0074822 0.029121 0.011884 0.011223 0.0087835 0.013310 0.041900 0.016162 0.011767 0.018784 0.00000 0.028753 0.022039 0.00000 0.019450 0.0067340 0.0067340 0.042057 0.033670 0.0020202 0.011019 0.043290 0.052303 0.00000 0.016420 0.00000 0.00000 0.6203951 0.9556914 0.9261769 0.7067449 0.900433 0.550906 0.031499 0.027202 0.0070707 0.000000 0.056231 1 0.021580 0.015860 0.0060903 6 0.023839 0.053051 -0.0292121 0.1498726 0.848658 insignificant 1 1 insignificant 0.329627 0.96870818 insignificant 1 1.00000 insignificant -0.00960336 0.442733 insignificant 1 insignificant 0.021598 0.852632 -0.8263785 6 0.027244 0.861675 -0.834430 1.0000e+00 1.6242e-92 hypomethylated 1.0000e+00 1.6242e-89 hypomethylated 1.0000e+00 5.5736e-18 hypomethylated 1.0000e+00 5.5736e-15 hypomethylated -0.8209182 1.1572e-05 lowCoverage 2.3143e-03 lowCoverage 0.021598 0.074935 -0.0271639 4 0.027244 0.040437 -0.0131931 8.5903e-01 3.0470e-05 lowCoverage 1.0000e+00 0.030470 lowCoverage 7.5381e-01 0.27424447 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0177144 3.3913e-01 lowCoverage 1.0000e+00 lowCoverage 0.015873 0.852632 -0.82912149 6 0.060630 0.861675 -0.8010449 1.0000e+00 1.5061e-63 hypomethylated 1.0000e+00 1.5061e-60 hypomethylated 1.0000e+00 5.0980e-15 hypomethylated 1.0000e+00 5.0980e-12 hypomethylated -0.8113149 6.0034e-06 lowCoverage 1.0006e-03 lowCoverage 0.015873 0.074935 -0.03642796 4 0.060630 0.040437 0.0201922 8.2641e-01 3.5414e-09 lowCoverage 1.0000e+00 3.5414e-06 lowCoverage 8.6686e-01 0.075799 lowCoverage 1.0000e+00 1 lowCoverage -0.0081110 6.9347e-01 lowCoverage 1.000000 lowCoverage 0.852632 0.074935 0.774811 4 0.861675 0.040437 0.8212371 3.7717e-29 1.0000e+00 lowCoverage 3.7717e-26 1.0000e+00 lowCoverage 7.8535e-08 1.0000e+00 lowCoverage 7.8535e-05 1.0000e+00 lowCoverage 0.8032039 3.4478e-06 lowCoverage 0.0034478 lowCoverage chr16 71686885 71687885 139386 ZFHX3 ENSG00000140836 0.847756 199 7 0.737734 212 7 0.668887 188 7 0.818313 207 7 0.829677 83 7 0.8866606 239 7 0.788799 105 7 0.759414 146 6 0.6969552 160 7 0.8849234 144 7 0.773113 165 7 0.664237 117 7 0.586471 178 5 0.72917 42 2 0.797593 145 7 0.65053 35 3 0.582176 121 6 0.667420 203 7 0.66332 63 4 0.800472 222 7 0.858904 68 5 0.528033 178 7 0.849554 173 7 0.827381 76 6 0.75871 75 6 0.745949 203 6 0.636139 87 7 0.823377 102 7 0.66286 105 5 0.7629076 218 6 0.65580 208 6 0.89168 265 7 0.325038 141 7 0.175493 81 5 0.1833333 121 3 0.20664 50 7 0.38437 137 7 0.2925061 210 6 0.757999 186 7 0.618873 164 6 0.705128 208 7 0.58858 190 7 0.625326 213 7 0.836585 0.642202 0.637741 0.754372 0.800870 0.8629799 0.761066 0.697855 0.620576 0.8153295 0.765432 0.524513 0.545337 0.750072 0.700251 0.67235 0.408607 0.572415 0.65774 0.769459 0.8482031 0.3955817 0.761140 0.708629 0.7599758 0.697450 0.669584 0.819631 0.72226 0.757597 0.58971 0.87750 0.2256844 0.0654958 0.1258372 0.0858228 0.232355 0.264861 0.644637 0.493426 0.6019958 0.432579 0.527884 4 0.718225 0.721274 -0.0070047 7 0.787625 0.780591 0.0070336 0.4820441 0.884893 insignificant 1 1 insignificant 0.809011 0.67106840 insignificant 1 1.00000 insignificant -0.00842659 0.825371 insignificant 1 insignificant 0.718130 0.190541 0.5170557 6 0.757285 0.278115 0.479171 8.1247e-38 1.0000e+00 hypermethylated 1.6249e-35 1.0000e+00 hypermethylated 8.5695e-15 1.0000e+00 hypermethylated 2.1424e-12 1.0000e+00 hypermethylated 0.4804508 1.0797e-06 hypermethylated 3.5990e-04 hypermethylated 0.718130 0.608741 0.1400766 7 0.757285 0.658190 0.0990950 1.1848e-04 9.6741e-01 weaklyHypermeth 5.6417e-03 1.000000 weaklyHypermeth 8.8837e-04 0.95721378 weaklyHypermeth 6.3455e-02 1.00000 weaklyHypermeth 0.0824997 5.9266e-02 insignificant 1.0000e+00 insignificant 0.721116 0.190541 0.52333104 6 0.749247 0.278115 0.4711321 2.0935e-25 1.0000e+00 hypermethylated 2.6169e-23 1.0000e+00 hypermethylated 6.0738e-12 1.0000e+00 hypermethylated 1.5185e-09 1.0000e+00 hypermethylated 0.4888774 1.4658e-07 hypermethylated 3.6645e-05 hypermethylated 0.721116 0.608741 0.15334420 7 0.749247 0.658190 0.0910566 1.4808e-03 8.3745e-01 weaklyHypermeth 5.9232e-02 1.0000e+00 weaklyHypermeth 8.6962e-04 0.854729 weaklyHypermeth 7.9057e-02 1 weaklyHypermeth 0.0909263 6.4083e-02 insignificant 1.000000 insignificant 0.190541 0.608741 -0.373368 6 0.278115 0.658190 -0.3800755 1.0000e+00 5.7504e-18 hypomethylated 1.0000e+00 9.5839e-16 hypomethylated 1.0000e+00 3.1321e-08 hypomethylated 1.0000e+00 7.8302e-06 hypomethylated -0.3979511 1.3850e-05 hypomethylated 0.0034625 hypomethylated chr16 71712094 71713094 139389 ENSG00000210754 0.781584 232 6 0.794562 290 6 0.612958 131 6 0.847564 161 5 0.853801 78 6 0.6229832 244 6 0.837482 87 6 0.737962 119 6 0.7963624 115 6 0.8786383 110 6 0.908357 219 6 0.887807 36 3 0.850144 141 6 1.00000 49 2 0.850916 114 6 0.73011 52 6 0.786111 37 4 0.854613 164 4 0.79666 202 6 0.855347 292 6 0.971188 39 4 0.758500 69 4 0.751391 125 6 0.684259 89 6 0.77143 56 4 0.862818 257 6 0.801879 76 4 0.810847 40 5 0.70692 145 6 0.8529955 318 6 0.77815 261 6 0.77564 334 6 0.687406 157 6 0.649938 97 5 0.5214286 50 3 0.61667 32 2 0.78574 161 6 0.6358543 207 6 0.898892 174 6 0.894477 182 6 0.897938 202 6 0.78456 164 6 0.850256 204 6 0.889231 0.823372 0.735922 0.894448 0.909222 0.7988421 0.902019 0.800818 0.864395 0.8989336 0.915766 0.886378 0.901627 0.918014 0.885365 0.77587 0.813506 0.902624 0.87311 0.880187 0.9525741 0.8298326 0.814359 0.919923 0.8423645 0.915886 0.835629 0.886198 0.86539 0.881166 0.91965 0.91490 0.7869317 0.6436035 0.4891762 0.7521919 0.845985 0.825365 0.914828 0.922920 0.9227035 0.903244 0.866466 3 0.877132 0.908135 -0.0268451 6 0.772788 0.799809 -0.0270209 0.9243957 0.032218 weaklyHypometh 1 1 insignificant 0.771073 0.43233430 insignificant 1 1.00000 insignificant 0.02036414 0.500972 insignificant 1 insignificant 0.877132 0.812500 0.0531985 6 0.772788 0.710468 0.062320 7.4763e-04 9.9643e-01 weaklyHypermeth 1.4659e-02 1.0000e+00 weaklyHypermeth 8.5346e-03 9.9991e-01 weaklyHypermeth 1.8966e-01 1.0000e+00 insignificant 0.1646921 3.2730e-03 lowCoverage 1.3092e-01 lowCoverage 0.878270 0.918919 -0.0355245 6 0.835568 0.842449 -0.0068807 8.2628e-01 2.4432e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 6.7467e-01 0.09894259 insignificant 1.0000e+00 1.00000 insignificant -0.0510262 1.1482e-01 insignificant 1.0000e+00 insignificant 0.908135 0.812500 0.08108302 6 0.799809 0.710468 0.0893411 2.0361e-04 9.9899e-01 weaklyHypermeth 5.2208e-03 1.0000e+00 weaklyHypermeth 2.4280e-03 9.9966e-01 weaklyHypermeth 5.9219e-02 1.0000e+00 weaklyHypermeth 0.1443280 7.1650e-03 lowCoverage 2.1074e-01 lowCoverage 0.907530 0.919006 -0.01007915 6 0.716476 0.862142 -0.1456664 7.8536e-01 5.3863e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2882e-01 0.451964 insignificant 1.0000e+00 1 insignificant -0.0713903 4.1581e-02 weaklyHypometh 1.000000 insignificant 0.814551 0.918919 -0.094389 6 0.764345 0.842449 -0.0781039 9.9475e-01 3.5549e-04 weaklyHypometh 1.0000e+00 1.3673e-02 weaklyHypometh 9.9979e-01 6.6355e-04 weaklyHypometh 1.0000e+00 5.4911e-02 weaklyHypometh -0.2157183 8.2115e-04 lowCoverage 0.0483030 lowCoverage chr16 71992126 71993126 139468 C16orf47 ENSG00000197445 0.875054 351 5 0.752815 355 5 0.764541 186 5 0.779215 266 5 0.655000 88 5 0.9080483 390 5 0.862358 170 5 0.812133 191 5 0.8386963 142 5 0.8617634 120 5 0.910766 261 5 0.707415 94 5 0.739876 208 5 0.83871 34 1 0.793197 186 5 0.68175 54 5 0.607692 69 4 0.748870 214 5 0.85841 194 5 0.896785 305 5 0.886288 79 5 0.798746 55 4 0.861637 188 5 0.729439 76 5 0.87698 61 5 0.869204 330 5 0.824425 110 5 0.801808 64 5 0.80086 226 5 0.8476085 490 5 0.83969 423 5 0.88510 360 5 0.560676 299 5 0.481643 230 5 0.6060455 259 5 0.79286 35 4 0.49492 208 5 0.7823721 426 5 0.735367 329 5 0.758193 305 5 0.609511 445 5 0.69723 248 5 0.820755 281 5 0.871163 0.753515 0.712239 0.756738 0.693700 0.8824716 0.845653 0.789966 0.831865 0.8170462 0.881045 0.654015 0.716375 0.802470 0.756869 0.68805 0.488413 0.710163 0.80731 0.879477 0.8546357 0.7269496 0.871677 0.717178 0.8487154 0.858511 0.779678 0.776973 0.79908 0.822698 0.79330 0.88201 0.5440969 0.3920027 0.4872127 0.7595729 0.455538 0.713070 0.672493 0.711447 0.6497460 0.634820 0.802238 5 0.818205 0.836312 -0.0244644 5 0.848832 0.863235 -0.0144031 0.9565637 0.103835 insignificant 1 1 insignificant 0.993912 0.03400649 weaklyHypometh 1 1.00000 insignificant -0.04049445 0.096772 lowCoverage 1 lowCoverage 0.818205 0.620453 0.1981494 5 0.848832 0.599602 0.249230 9.0913e-10 9.9999e-01 weaklyHypermeth 3.7880e-08 1.0000e+00 weaklyHypermeth 3.5360e-04 9.9701e-01 weaklyHypermeth 1.3600e-02 1.0000e+00 weaklyHypermeth 0.1749029 2.4722e-02 lowCoverage 5.4938e-01 lowCoverage 0.818205 0.770522 0.0775779 5 0.848832 0.623115 0.2257171 3.0343e-03 9.2418e-01 weaklyHypermeth 1.3193e-01 1.000000 insignificant 4.6811e-02 0.79612944 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0704426 1.2360e-01 lowCoverage 1.0000e+00 lowCoverage 0.836312 0.620453 0.23637510 5 0.863235 0.599602 0.2636331 3.4704e-08 1.0000e+00 hypermethylated 1.3348e-06 1.0000e+00 hypermethylated 1.3354e-05 9.9991e-01 hypermethylated 7.0285e-04 1.0000e+00 hypermethylated 0.2153974 1.1143e-02 lowCoverage 3.0117e-01 lowCoverage 0.836312 0.770522 0.11067366 5 0.863235 0.623115 0.2401202 1.1043e-03 9.9897e-01 weaklyHypermeth 4.9533e-02 1.0000e+00 weaklyHypermeth 1.0866e-03 0.999957 weaklyHypermeth 9.0550e-02 1 weaklyHypermeth 0.1109370 2.9871e-02 lowCoverage 1.000000 lowCoverage 0.620453 0.770522 -0.121714 5 0.599602 0.623115 -0.0235129 9.9958e-01 5.0997e-02 insignificant 1.0000e+00 9.2723e-01 insignificant 9.8283e-01 1.4970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1044604 1.5274e-01 lowCoverage 1.0000000 lowCoverage chr16 71996640 71997640 139470 C16orf47 ENSG00000197445 0.952662 176 7 0.804219 178 7 0.831633 46 4 0.918958 201 7 0.870536 39 5 0.9118355 150 5 0.916789 82 6 0.943515 87 7 0.8858364 46 3 0.9761905 51 5 0.900735 245 7 0.750000 11 0 0.963768 60 3 1.00000 21 1 0.961224 38 3 0.82937 35 4 0.766667 14 2 0.518707 78 3 0.97156 76 4 0.954598 137 7 0.866475 43 3 0.906593 39 3 0.895623 97 7 0.944925 96 7 0.94048 60 7 0.895331 205 7 0.881083 51 6 0.888889 25 2 0.96429 60 3 0.9601745 267 7 0.92841 337 7 0.92949 223 7 0.048035 141 7 0.014286 97 7 0.0108586 199 6 0.00000 25 3 0.13622 128 6 0.0095238 204 7 0.973923 149 6 0.802010 216 7 0.840848 254 7 0.96917 56 3 0.698606 212 7 0.926658 0.832013 0.820608 0.925864 0.809934 0.8866769 0.885092 0.899068 0.869191 0.9706333 0.872946 0.752033 0.955272 0.927386 0.975369 0.76341 0.812048 0.623700 0.97919 0.954386 0.8180708 0.9076039 0.872449 0.954004 0.9171456 0.904048 0.814418 0.861634 0.98563 0.957837 0.92987 0.93208 0.0409198 0.0057471 0.0149394 0.0158227 0.091661 0.011494 0.949918 0.923348 0.8463662 0.947322 0.701848 1 0.896045 0.924152 -0.0240074 7 0.893722 0.923567 -0.0298445 0.9594960 0.057835 insignificant 1 1 insignificant 0.840137 0.40330522 insignificant 1 1.00000 insignificant -0.03537241 0.195964 lowCoverage 1 lowCoverage 0.896045 0.040302 0.8577216 7 0.893722 0.044166 0.849557 1.0123e-85 1.0000e+00 hypermethylated 1.0123e-82 1.0000e+00 hypermethylated 1.1581e-18 1.0000e+00 hypermethylated 1.1581e-15 1.0000e+00 hypermethylated 0.8449530 2.7228e-16 lowCoverage 1.3614e-13 lowCoverage 0.896104 0.862458 0.0364051 7 0.907007 0.750358 0.1566488 6.6993e-02 9.8623e-01 insignificant 1.0000e+00 1.000000 insignificant 1.4985e-01 0.95858218 insignificant 1.0000e+00 1.00000 insignificant 0.0245293 6.8666e-01 lowCoverage 1.0000e+00 lowCoverage 0.924152 0.040302 0.88364185 7 0.923567 0.044166 0.8794013 2.7777e-80 1.0000e+00 hypermethylated 2.7777e-77 1.0000e+00 hypermethylated 1.8866e-16 1.0000e+00 hypermethylated 1.8866e-13 1.0000e+00 hypermethylated 0.8803254 2.0893e-09 hypermethylated 1.0446e-06 hypermethylated 0.924152 0.863431 0.06127445 7 0.923567 0.857552 0.0660145 1.3861e-03 9.9977e-01 weaklyHypermeth 5.7754e-02 1.0000e+00 weaklyHypermeth 1.2080e-01 0.990969 insignificant 1.0000e+00 1 insignificant 0.0599017 3.1868e-01 insignificant 1.000000 insignificant 0.040302 0.863431 -0.820752 7 0.044166 0.857552 -0.8133868 1.0000e+00 1.0626e-35 hypomethylated 1.0000e+00 1.0626e-32 hypomethylated 1.0000e+00 2.4231e-10 hypomethylated 1.0000e+00 1.8079e-07 hypomethylated -0.8204237 1.7977e-05 hypomethylated 0.0035953 hypomethylated chr16 72019159 72020159 139477 C16orf47 ENSG00000197445 0.680698 296 6 0.616505 275 7 0.600607 104 5 0.738162 178 5 0.556638 96 6 0.7060441 522 8 0.548569 123 6 0.567504 152 6 0.6587065 82 6 0.7604885 85 5 0.679685 257 5 0.661616 56 2 0.586619 148 7 0.56407 54 3 0.749325 89 5 0.53682 57 2 0.467262 127 3 0.587304 218 6 0.66830 235 10 0.740024 380 8 0.567849 120 8 0.627493 65 5 0.599700 207 8 0.721511 124 6 0.66210 107 6 0.531746 258 7 0.705960 118 8 0.686239 104 5 0.55745 187 8 0.6104234 248 6 0.66338 223 5 0.72445 298 9 0.451320 214 5 0.449955 204 5 0.3155505 265 5 0.53667 44 3 0.39513 330 8 0.5681815 302 5 0.449757 414 8 0.591735 278 5 0.591291 283 6 0.62218 143 6 0.712740 220 5 0.736125 0.680513 0.649097 0.790892 0.766273 0.7371359 0.703500 0.677416 0.698066 0.7577925 0.764002 0.771536 0.673348 0.716136 0.778322 0.75245 0.734756 0.690656 0.68531 0.789326 0.5013325 0.7787132 0.693183 0.775997 0.7001511 0.773810 0.764261 0.743005 0.72799 0.689365 0.71031 0.70676 0.4875503 0.5031467 0.5129421 0.6280619 0.593467 0.660217 0.639818 0.684661 0.7247029 0.730560 0.733574 2 0.741653 0.740885 0.0068782 8 0.584668 0.588845 -0.0041766 0.4067553 0.915682 insignificant 1 1 insignificant 0.756212 0.67660428 insignificant 1 1.00000 insignificant -0.00444471 0.867889 insignificant 1 insignificant 0.741862 0.439204 0.2732602 8 0.637820 0.477331 0.160488 8.4153e-25 9.8722e-01 hypermethylated 7.6503e-23 1.0000e+00 hypermethylated 2.9999e-08 9.8516e-01 hypermethylated 3.3332e-06 1.0000e+00 hypermethylated 0.1809470 2.9103e-03 weaklyHypermeth 1.2126e-01 insignificant 0.741862 0.581465 0.1481321 5 0.637820 0.599640 0.0381793 6.3995e-12 3.5560e-02 weaklyHypermeth 7.9993e-10 1.000000 weaklyHypermeth 6.5172e-04 0.07897944 weaklyHypermeth 5.0133e-02 1.00000 weaklyHypermeth 0.0402067 4.1879e-01 insignificant 1.0000e+00 insignificant 0.741606 0.438881 0.29242422 8 0.630511 0.437554 0.1929575 4.1158e-14 9.9989e-01 hypermethylated 3.1660e-12 1.0000e+00 hypermethylated 6.5305e-06 9.9669e-01 hypermethylated 4.0816e-04 1.0000e+00 hypermethylated 0.1853917 2.5636e-03 weaklyHypermeth 8.8398e-02 weaklyHypermeth 0.741354 0.581465 0.17494745 5 0.596921 0.599640 -0.0027190 1.8971e-07 1.5626e-01 weaklyHypermeth 1.9086e-05 1.0000e+00 weaklyHypermeth 2.3328e-03 0.128927 weaklyHypermeth 1.5552e-01 1 insignificant 0.0446514 3.7428e-01 insignificant 1.000000 insignificant 0.439204 0.581465 -0.143796 5 0.477331 0.599640 -0.1223091 9.9739e-01 3.5376e-04 weaklyHypometh 1.0000e+00 1.3673e-02 weaklyHypometh 9.9851e-01 1.9252e-03 weaklyHypometh 1.0000e+00 1.0695e-01 insignificant -0.1407402 3.5879e-02 weaklyHypometh 0.8969785 insignificant chr16 72153758 72154758 139522 C16orf47 ENSG00000197445 0.527923 372 7 0.568591 368 8 0.524850 360 8 0.487306 246 7 0.491104 246 8 0.5280797 174 7 0.474357 189 8 0.503942 235 8 0.4770038 225 8 0.5363248 221 8 0.593922 364 8 0.494143 156 6 0.505414 316 8 0.48815 201 7 0.566804 277 8 0.48312 129 6 0.711651 68 4 0.352683 268 8 0.58887 283 8 0.584110 246 7 0.454159 85 8 0.469444 43 3 0.671197 270 7 0.490432 128 8 0.46932 89 7 0.614995 270 8 0.489341 121 7 0.457028 98 7 0.58834 268 8 0.6081789 406 8 0.55626 363 8 0.57997 207 7 0.467506 304 8 0.503379 193 8 0.4992814 217 8 0.43750 14 0 0.52859 220 8 0.4674821 319 7 0.469591 288 8 0.670482 320 7 0.664824 291 7 0.59237 301 7 0.536713 221 7 0.424812 0.485453 0.400666 0.374785 0.404701 0.4197718 0.387657 0.393310 0.409460 0.4801087 0.471335 0.375429 0.418745 0.372655 0.480983 0.42937 0.635924 0.469793 0.52989 0.500715 0.3844651 0.4175738 0.466919 0.440030 0.3939561 0.458389 0.409014 0.413218 0.50907 0.478590 0.51207 0.46827 0.4109970 0.4162317 0.4186503 0.2881356 0.404115 0.429566 0.427096 0.436783 0.4780274 0.491694 0.417269 6 0.457322 0.497442 -0.0251125 8 0.401643 0.554406 -0.1527631 0.7535800 0.113965 insignificant 1 1 insignificant 0.734917 0.29118352 insignificant 1 1.00000 insignificant -0.01297223 0.630112 insignificant 1 insignificant 0.457600 0.453828 0.0257803 8 0.535524 0.484190 0.051334 5.5718e-04 9.3495e-01 weaklyHypermeth 1.1371e-02 1.0000e+00 weaklyHypermeth 6.9949e-02 9.8815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0404604 6.3581e-02 insignificant 1.0000e+00 insignificant 0.457195 0.454225 -0.0385404 7 0.377550 0.653779 -0.2762294 8.6110e-01 1.3002e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9907e-01 0.02402906 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0623786 1.8775e-01 insignificant 1.0000e+00 insignificant 0.496147 0.453828 0.04807448 8 0.470689 0.484190 -0.0135008 3.4604e-03 9.8700e-01 weaklyHypermeth 6.4971e-02 1.0000e+00 weaklyHypermeth 1.2008e-01 9.5737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0534326 5.0499e-02 insignificant 1.0000e+00 insignificant 0.498083 0.454609 -0.00636565 7 0.637739 0.682631 -0.0448916 5.3875e-01 6.2557e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3872e-01 0.276182 insignificant 1.0000e+00 1 insignificant -0.0494064 2.9954e-01 insignificant 1.000000 insignificant 0.453755 0.452684 -0.052051 7 0.482214 0.523946 -0.0417324 9.0573e-01 1.2450e-03 weaklyHypometh 1.0000e+00 4.2930e-02 weaklyHypometh 9.9926e-01 9.4926e-03 weaklyHypometh 1.0000e+00 2.9664e-01 insignificant -0.1028390 5.2534e-02 insignificant 1.0000000 insignificant chr16 72347014 72348014 139566 C16orf47 ENSG00000197445 0.950880 302 9 0.894149 130 8 0.816558 89 7 0.964457 317 7 0.932061 74 7 0.8861114 404 9 0.921111 106 9 0.932540 117 7 0.9069088 116 7 0.9496753 104 7 0.979660 210 7 0.897306 27 1 0.971274 128 4 0.98701 46 3 0.962381 107 5 0.85000 45 6 0.801587 34 1 0.963666 314 9 0.94444 68 7 0.963174 317 9 0.879683 53 4 0.970713 90 7 0.964206 142 8 1.000000 50 4 0.93939 86 6 0.966726 196 9 0.896462 112 7 0.977778 52 3 0.86417 143 7 0.9698540 231 9 0.95019 151 9 0.95966 348 9 0.367238 156 7 0.271784 47 4 0.3333333 63 2 0.50559 101 6 0.39597 155 9 0.6794594 180 9 0.964743 296 7 0.932847 225 7 0.922991 265 7 0.97558 214 5 0.922263 350 7 0.931405 0.889862 0.795365 0.946985 0.896977 0.8915607 0.895960 0.930519 0.929584 0.9585399 0.966280 0.918733 0.948423 0.964187 0.938990 0.99273 0.785185 0.954525 0.98485 0.946285 0.8800000 0.9490356 0.948636 0.996183 0.9661557 0.924178 0.818898 0.955556 0.82135 0.968787 0.96613 0.93815 0.3686947 0.2906915 0.3792659 0.6554312 0.457673 0.728968 0.970842 0.939290 0.9264329 0.956577 0.923779 3 0.930278 0.937689 -0.0072212 9 0.937779 0.952968 -0.0151892 0.9712164 0.267890 insignificant 1 1 insignificant 0.934064 0.50311938 insignificant 1 1.00000 insignificant -0.02115518 0.222979 insignificant 1 insignificant 0.930255 0.493581 0.4251038 7 0.930866 0.493388 0.437477 2.7877e-47 1.0000e+00 hypermethylated 6.9693e-45 1.0000e+00 hypermethylated 4.2555e-18 1.0000e+00 hypermethylated 2.1277e-15 1.0000e+00 hypermethylated 0.4981856 3.0894e-04 hypermethylated 1.7273e-02 hypermethylated 0.930278 0.942963 -0.0133820 7 0.937779 0.943612 -0.0058327 8.6992e-01 5.1107e-01 insignificant 1.0000e+00 1.000000 insignificant 7.6821e-01 0.51486357 insignificant 1.0000e+00 1.00000 insignificant -0.0199369 2.3815e-01 insignificant 1.0000e+00 insignificant 0.937651 0.493581 0.44046241 7 0.947742 0.493388 0.4543541 2.7579e-33 1.0000e+00 hypermethylated 5.5157e-31 1.0000e+00 hypermethylated 5.1663e-15 1.0000e+00 hypermethylated 1.7221e-12 1.0000e+00 hypermethylated 0.5193408 2.4575e-04 hypermethylated 1.6383e-02 hypermethylated 0.937689 0.942963 -0.00549632 7 0.952968 0.943612 0.0093565 3.9147e-01 9.1683e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0233e-01 0.974252 insignificant 1.0000e+00 1 insignificant 0.0012183 9.4227e-01 insignificant 1.000000 insignificant 0.493581 0.942921 -0.447006 7 0.493388 0.937346 -0.4439580 1.0000e+00 2.8230e-16 hypomethylated 1.0000e+00 4.0328e-14 hypomethylated 1.0000e+00 3.6158e-10 hypomethylated 1.0000e+00 1.8079e-07 hypomethylated -0.5181224 2.6315e-04 hypomethylated 0.0219291 hypomethylated chr16 72847016 72848016 139694 ENSG00000222127 0.769616 367 9 0.644376 156 9 0.609889 176 9 0.722466 206 9 0.732698 89 9 0.7095910 299 9 0.688196 114 9 0.750310 114 6 0.7314173 117 9 0.6668979 115 9 0.707732 241 9 0.665769 73 8 0.772080 82 5 0.82197 23 2 0.788030 151 9 0.84207 87 9 0.767664 66 7 0.721061 233 9 0.73294 219 9 0.730401 259 9 0.863757 46 4 0.828880 84 9 0.751817 194 9 0.773148 46 3 0.83642 69 6 0.768325 154 7 0.726888 73 5 0.950617 43 5 0.85201 112 5 0.6848966 213 9 0.69920 146 9 0.73818 323 9 0.615719 86 5 0.696540 155 9 0.6939103 208 9 0.69511 94 8 0.63950 90 5 0.5979853 185 9 0.762114 278 9 0.785020 310 9 0.808072 243 9 0.74019 344 9 0.796582 286 9 0.812681 0.739593 0.668032 0.786446 0.798700 0.7709892 0.737215 0.775390 0.782431 0.7780743 0.777619 0.708940 0.790071 NA 0.826282 0.86332 0.853383 0.739387 0.80160 0.778529 0.8864590 0.8562601 0.786171 0.816814 0.8805066 0.838183 0.761846 0.939305 0.80109 0.754400 0.76116 0.76841 0.7301532 0.7265380 0.7233537 0.6968220 0.707039 0.633696 0.813398 0.841953 0.8457249 0.805583 0.832618 5 0.752118 0.787092 -0.0207951 9 0.726049 0.756158 -0.0301093 0.9119281 0.010679 weaklyHypometh 1 1 insignificant 0.999045 0.00055705 weaklyHypometh 1 0.18568 insignificant -0.06075306 0.030527 weaklyHypometh 1 insignificant 0.752118 0.706601 0.0609949 9 0.726049 0.681618 0.044431 8.6646e-05 9.6144e-01 weaklyHypermeth 2.0630e-03 1.0000e+00 weaklyHypermeth 1.5537e-03 9.8126e-01 weaklyHypermeth 4.4390e-02 1.0000e+00 weaklyHypermeth 0.0722975 8.0694e-03 weaklyHypermeth 2.5217e-01 insignificant 0.752118 0.785079 -0.0490690 9 0.726049 0.776005 -0.0499560 9.9976e-01 1.2655e-03 weaklyHypometh 1.0000e+00 0.354662 insignificant 9.9996e-01 0.00088124 weaklyHypometh 1.0000e+00 0.88124 insignificant -0.0496371 1.3950e-02 weaklyHypometh 1.0000e+00 insignificant 0.787092 0.706601 0.07863652 9 0.756158 0.681618 0.0745402 9.0330e-05 9.9965e-01 weaklyHypermeth 2.4414e-03 1.0000e+00 weaklyHypermeth 1.6779e-04 9.9996e-01 weaklyHypermeth 6.9914e-03 1.0000e+00 weaklyHypermeth 0.1330506 3.1741e-04 weaklyHypermeth 1.9838e-02 weaklyHypermeth 0.787092 0.785079 -0.02860283 9 0.756158 0.776005 -0.0198467 9.1933e-01 1.0327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0738e-01 0.847450 insignificant 1.0000e+00 1 insignificant 0.0111160 6.7050e-01 insignificant 1.000000 insignificant 0.706601 0.785079 -0.110538 9 0.681618 0.776005 -0.0943869 9.9960e-01 2.2088e-07 weaklyHypometh 1.0000e+00 1.5777e-05 weaklyHypometh 9.9917e-01 9.8012e-06 weaklyHypometh 1.0000e+00 1.6335e-03 weaklyHypometh -0.1219346 4.4052e-04 weaklyHypometh 0.0338861 weaklyHypometh chr16 72856602 72857602 139698 ENSG00000222127 0.736186 195 7 0.706790 141 7 0.612103 57 7 0.710874 142 6 0.664194 95 4 0.7021363 188 6 0.809889 64 4 0.806982 134 7 0.6876417 92 7 0.8624675 94 4 0.706152 187 7 0.984127 39 2 0.596803 140 7 0.75561 89 7 0.732660 120 7 0.76032 37 3 0.833333 12 1 0.721022 148 6 0.65492 71 5 0.847585 152 5 0.770370 37 3 0.966667 36 2 0.623708 128 7 0.591565 73 7 0.59299 73 6 0.742262 151 7 0.713308 111 7 0.584384 41 2 0.78078 93 6 0.6891575 151 7 0.67394 134 7 0.65454 168 7 0.756482 166 7 0.569781 60 5 0.6993590 211 6 0.68750 18 1 0.68619 146 7 0.6904762 120 6 0.670748 97 7 0.750364 138 6 0.799237 127 7 0.69754 75 3 0.661519 116 7 0.830923 0.830090 0.737220 0.841865 0.840291 0.8565957 0.794946 0.879986 0.781845 0.8780664 0.842018 0.942130 0.799143 0.848462 0.824541 0.86343 0.919521 0.843963 0.73831 0.896542 0.8468447 0.8569975 0.788308 0.685516 0.7540396 0.859664 0.803325 0.752962 0.77699 0.838440 0.79811 0.78820 0.7908573 0.7381629 0.8537215 0.9100524 0.780018 0.806327 0.824603 0.869432 0.8785388 0.819723 0.840849 1 0.823235 0.775920 0.0316478 7 0.789580 0.686509 0.1030716 0.1046738 0.978973 insignificant 1 1 insignificant 0.026448 0.99532110 weaklyHypermeth 1 1.00000 insignificant 0.04595067 0.234958 insignificant 1 insignificant 0.823396 0.791667 0.0246580 7 0.808709 0.654227 0.154483 3.5036e-03 9.2496e-01 weaklyHypermeth 5.4744e-02 1.0000e+00 weaklyHypermeth 1.8030e-02 9.8357e-01 weaklyHypermeth 3.4018e-01 1.0000e+00 insignificant 0.0629581 7.3964e-02 insignificant 1.0000e+00 insignificant 0.822396 0.806510 -0.0040928 6 0.723210 0.725365 -0.0021550 8.1035e-01 5.8757e-01 insignificant 1.0000e+00 1.000000 insignificant 7.0434e-01 0.51708531 insignificant 1.0000e+00 1.00000 insignificant 0.0287091 4.0725e-01 insignificant 1.0000e+00 insignificant 0.775920 0.792479 -0.00678048 7 0.686509 0.669649 0.0168594 8.0295e-01 7.8049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7430e-01 8.7597e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0170074 6.7669e-01 insignificant 1.0000e+00 insignificant 0.776194 0.806510 -0.03168118 6 0.695012 0.725365 -0.0303526 8.6948e-01 1.3586e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7532e-01 0.098746 insignificant 1.0000e+00 1 insignificant -0.0172416 6.7845e-01 insignificant 1.000000 insignificant 0.795198 0.806510 -0.024344 6 0.694737 0.725365 -0.0306280 8.8364e-01 2.4296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8291e-01 2.7210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0342490 3.6614e-01 insignificant 1.0000000 insignificant chr16 73189959 73190959 139709 ENSG00000207525 0.652193 135 8 0.706382 152 8 0.575812 64 8 0.720496 136 8 0.645707 48 5 0.6344047 200 8 0.726667 40 5 0.704124 157 8 0.7469551 71 7 0.7792929 59 7 0.713540 246 8 0.714286 12 0 0.743056 62 8 0.72996 71 8 0.761161 60 7 0.43333 11 0 0.000000 4 0 0.710833 145 9 0.60616 82 7 0.717389 145 7 0.828704 40 3 0.904762 26 2 0.745098 96 9 0.577796 68 7 0.80432 42 3 0.677457 190 8 0.709590 55 5 0.845238 31 3 0.60875 94 7 0.7942251 184 8 0.76315 135 8 0.66452 189 8 0.839779 117 8 0.722917 82 5 0.7212041 107 5 0.66000 20 3 0.53242 68 8 0.6548993 203 8 0.804057 64 6 0.796402 119 8 0.680011 116 6 0.74074 43 5 0.773922 118 7 0.633220 0.633250 0.515657 0.732060 0.684484 0.6002715 0.649259 0.748688 0.680570 0.7360494 0.723012 0.667587 0.665432 0.690300 0.677579 0.50975 0.222453 0.689954 0.71697 0.743609 0.7861111 0.9038682 0.784150 0.723227 0.7993827 0.692988 0.748909 0.851854 0.67958 0.694093 0.70829 0.78305 0.8047124 0.6756019 0.6316230 0.6308515 0.608669 0.722189 0.747895 0.736595 0.6766238 0.774731 0.693528 0 0.724737 0.798085 -0.0433912 8 0.692814 0.708475 -0.0156607 0.9288588 0.025711 weaklyHypometh 1 1 insignificant 0.900420 0.00654752 weaklyHypometh 1 1.00000 insignificant -0.09254670 0.063133 insignificant 1 insignificant 0.724737 0.738255 -0.0089275 8 0.692814 0.600326 0.092488 1.1986e-01 4.1346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5020e-01 5.1449e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0374486 5.1826e-01 insignificant 1.0000e+00 insignificant 0.724737 0.704348 -0.0309433 6 0.692814 0.737346 -0.0445319 9.4282e-01 3.3542e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9418e-01 0.01274633 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.1079387 2.4437e-02 weaklyHypometh 1.0000e+00 insignificant 0.798261 0.738693 0.03151423 8 0.734977 0.636660 0.0983173 7.9925e-02 9.7363e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2603e-02 9.5344e-01 weaklyHypermeth 7.3454e-01 1.0000e+00 insignificant 0.0550981 2.9936e-01 insignificant 1.0000e+00 insignificant 0.798085 0.704348 0.01787399 6 0.708475 0.737346 -0.0288712 6.4993e-01 4.6496e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1759e-01 0.236579 insignificant 1.0000e+00 1 insignificant -0.0153920 6.7902e-01 insignificant 1.000000 insignificant 0.738255 0.704348 -0.018348 6 0.600326 0.737346 -0.1370203 9.5407e-01 3.4488e-02 weaklyHypometh 1.0000e+00 6.8977e-01 insignificant 9.4756e-01 1.2512e-02 weaklyHypometh 1.0000e+00 3.6799e-01 insignificant -0.0704901 1.7555e-01 insignificant 1.0000000 insignificant chr16 73315774 73316774 139710 MLKL ENSG00000168404 0.759064 259 10 0.756403 358 11 0.710602 297 10 0.724319 266 6 0.879233 259 9 0.7071352 334 8 0.837466 241 10 0.799849 373 10 0.8358706 257 10 0.8680853 276 10 0.829336 402 10 0.806631 212 10 0.522371 335 10 0.72714 207 6 0.697639 389 10 0.84479 162 7 0.678095 90 5 0.460761 321 7 0.85823 385 10 0.748742 198 9 0.763492 77 9 0.529440 132 6 0.838527 240 9 0.786369 213 9 0.78013 67 6 0.771756 444 11 0.707316 186 9 0.668778 143 8 0.78894 398 10 0.5792545 553 11 0.45949 455 11 0.78160 327 10 0.339636 373 11 0.550553 252 10 0.8750000 115 4 0.25000 46 4 0.34691 363 10 0.4636034 330 11 0.574950 245 9 0.501065 226 8 0.604157 356 7 0.63472 220 9 0.448889 244 8 0.726162 0.766877 0.743600 0.686408 0.906765 0.8478965 0.813725 0.837304 0.841428 0.9010391 0.814424 0.810713 0.471605 0.752981 0.728267 0.83466 0.668797 0.427576 0.86814 0.805185 0.7672410 0.4850318 0.838976 0.858814 0.6384083 0.780194 0.705731 0.799536 0.77849 0.567470 0.43879 0.85008 0.3838796 0.5699165 0.9242011 0.1491443 0.344118 0.367834 0.484070 0.566824 0.5362406 0.667446 0.466257 6 0.767835 0.709248 0.0578370 10 0.702715 0.666716 0.0359996 0.0253341 0.989027 weaklyHypermeth 1 1 insignificant 0.090996 0.95539108 insignificant 1 1.00000 insignificant 0.04799808 0.270491 insignificant 1 insignificant 0.767835 0.418526 0.3431695 10 0.702715 0.381500 0.321215 4.9888e-28 1.0000e+00 hypermethylated 5.5431e-26 1.0000e+00 hypermethylated 4.3711e-09 1.0000e+00 hypermethylated 5.4639e-07 1.0000e+00 hypermethylated 0.2816383 2.6237e-02 weaklyHypermeth 5.6099e-01 insignificant 0.767835 0.546863 0.2099738 8 0.702715 0.589874 0.1128407 3.1971e-11 9.9998e-01 hypermethylated 3.5523e-09 1.000000 hypermethylated 4.9117e-09 0.99999300 hypermethylated 1.2279e-06 1.00000 hypermethylated 0.1998316 1.1448e-03 weaklyHypermeth 2.8621e-01 insignificant 0.709248 0.418526 0.28772693 10 0.666716 0.381500 0.2852156 3.0702e-14 1.0000e+00 hypermethylated 2.7911e-12 1.0000e+00 hypermethylated 5.1481e-06 1.0000e+00 hypermethylated 3.4321e-04 1.0000e+00 hypermethylated 0.2336402 5.1128e-02 insignificant 1.0000e+00 insignificant 0.709248 0.546863 0.14843425 8 0.666716 0.589874 0.0768411 5.9571e-05 9.9994e-01 weaklyHypermeth 3.9714e-03 1.0000e+00 weaklyHypermeth 2.7920e-04 0.999780 weaklyHypermeth 3.1022e-02 1 weaklyHypermeth 0.1518335 8.9536e-03 weaklyHypermeth 0.864497 insignificant 0.418526 0.546863 -0.129765 8 0.381500 0.589874 -0.2083745 9.9983e-01 5.9742e-03 weaklyHypometh 1.0000e+00 1.4571e-01 insignificant 9.9992e-01 7.6463e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0818067 4.3263e-01 insignificant 1.0000000 insignificant chr16 73836155 73837155 139716 BCAR1 ENSG00000050820 0.490930 108 6 0.259019 262 6 0.395237 202 6 0.388296 141 5 0.199092 202 5 0.5893344 178 6 0.471558 175 6 0.197296 171 6 0.2597398 163 5 0.4516389 156 5 0.641395 224 6 0.407235 158 5 0.120490 156 5 0.40166 158 4 0.155556 190 5 0.26186 110 5 0.101852 37 2 0.463776 110 5 0.27487 212 6 0.256114 133 6 0.520574 94 5 0.293741 85 4 0.361705 107 5 0.441020 100 6 0.56081 239 6 0.407947 269 6 0.404145 184 5 0.164425 125 5 0.46779 174 6 0.3769152 322 6 0.32251 298 6 0.58070 145 6 0.146259 198 6 0.023810 133 6 0.0047619 192 4 0.00000 101 4 0.19318 231 9 0.0246914 299 6 0.153604 138 6 0.044209 105 4 0.316371 117 5 0.23889 93 5 0.232033 100 6 0.470032 0.287219 0.340001 0.292765 0.250731 0.6128026 0.473767 0.256148 0.288367 0.3940598 0.566697 0.314459 0.199830 0.373268 0.157763 0.23294 0.199122 0.372560 0.25687 0.237186 0.4771848 0.1520090 0.419915 0.387392 0.3995647 0.351453 0.354851 0.233488 0.50987 0.325758 0.25439 0.58189 0.0035926 0.0123274 0.0090214 0.0054288 0.056453 0.033531 0.103077 0.023512 0.1252438 0.064398 0.136870 3 0.319457 0.360825 -0.0318975 6 0.515216 0.421176 0.0940402 0.7796723 0.350150 insignificant 1 1 insignificant 0.916030 0.60666378 insignificant 1 1.00000 insignificant -0.06917572 0.162959 insignificant 1 insignificant 0.318926 0.031332 0.2985800 6 0.428457 0.139199 0.289259 2.7291e-14 9.9823e-01 hypermethylated 1.5162e-12 1.0000e+00 hypermethylated 7.7560e-10 9.9999e-01 hypermethylated 1.1080e-07 1.0000e+00 hypermethylated 0.2738980 3.2356e-05 hypermethylated 4.3560e-03 hypermethylated 0.318899 0.119349 0.2118181 6 0.422462 0.303409 0.1190534 1.1136e-05 9.9981e-01 hypermethylated 7.9540e-04 1.000000 hypermethylated 4.3993e-06 0.99993060 hypermethylated 6.2848e-04 1.00000 hypermethylated 0.1423262 3.4843e-02 weaklyHypermeth 1.0000e+00 insignificant 0.359624 0.031196 0.33332726 6 0.370581 0.109370 0.2612107 4.9513e-14 1.0000e+00 hypermethylated 3.3302e-12 1.0000e+00 hypermethylated 9.0518e-08 1.0000e+00 hypermethylated 1.2931e-05 1.0000e+00 hypermethylated 0.3430737 5.2473e-06 hypermethylated 1.0006e-03 hypermethylated 0.358535 0.119349 0.24855899 6 0.400253 0.303409 0.0968442 1.9086e-07 9.9901e-01 hypermethylated 1.9086e-05 1.0000e+00 hypermethylated 1.3428e-05 0.999653 hypermethylated 1.9182e-03 1 hypermethylated 0.2115020 5.3643e-03 weaklyHypermeth 0.670537 insignificant 0.027361 0.119349 -0.097918 6 0.106577 0.303409 -0.1968321 9.9973e-01 2.4006e-08 weaklyHypometh 1.0000e+00 2.0005e-06 weaklyHypometh 9.9999e-01 7.1384e-04 weaklyHypometh 1.0000e+00 5.4911e-02 weaklyHypometh -0.1315717 5.1532e-02 insignificant 1.0000000 insignificant chr16 74828942 74829942 139776 ENSG00000213307 0.790062 90 5 0.674785 114 5 0.383333 42 5 0.649947 115 5 0.866667 22 2 0.7033712 166 5 0.623810 36 5 0.715438 101 5 0.5790476 38 2 0.5416667 27 2 0.715674 146 5 0.863946 25 2 0.635341 59 5 0.70476 28 3 0.678788 56 5 0.66667 11 0 NA 0 0 0.832609 95 5 0.82196 81 5 0.795448 124 5 0.611111 18 2 0.628676 31 2 0.705262 72 5 0.640873 43 2 0.80208 20 2 0.611835 116 5 0.775000 37 2 0.428571 23 2 0.58732 65 5 0.7081326 96 5 0.70034 104 5 0.77600 156 5 0.581641 100 5 0.584945 58 5 0.6385621 107 5 0.50000 4 0 0.66251 58 5 0.6210341 121 5 0.868778 73 5 0.730819 94 5 0.745380 67 5 0.68611 39 5 0.835593 105 5 0.788820 0.752739 0.574627 0.718234 0.845771 0.7864929 0.850036 0.755910 0.628998 0.8208955 0.802139 0.839375 0.783530 0.810945 0.803370 0.37697 NA 0.846636 0.78936 0.844793 0.5980587 0.7147680 0.699562 0.744904 0.8860440 0.748205 0.666467 0.688699 0.70674 0.683396 0.76683 0.72748 0.6534815 0.6309496 0.6179397 0.8432021 0.668621 0.702870 0.927939 0.781007 0.8655233 0.912728 0.828652 2 0.726744 0.690141 0.0407985 5 0.767734 0.658933 0.1088009 0.0483066 0.983774 weaklyHypermeth 1 1 insignificant 0.044418 0.96311583 weaklyHypermeth 1 1.00000 insignificant 0.03241643 0.431838 lowCoverage 1 lowCoverage 0.726208 0.627232 0.0896755 5 0.708374 0.622314 0.086060 5.3767e-04 9.9881e-01 weaklyHypermeth 1.1201e-02 1.0000e+00 weaklyHypermeth 8.1585e-03 9.9976e-01 weaklyHypermeth 1.8542e-01 1.0000e+00 insignificant 0.0989014 1.3236e-02 lowCoverage 3.7818e-01 lowCoverage 0.726744 0.753968 -0.0482293 5 0.767734 0.844994 -0.0772609 9.9555e-01 2.1098e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9561e-01 0.23366095 insignificant 1.0000e+00 1.00000 insignificant -0.0763195 1.1197e-01 lowCoverage 1.0000e+00 lowCoverage 0.691004 0.627232 0.05329974 5 0.674292 0.622314 0.0519787 4.0510e-02 9.8497e-01 weaklyHypermeth 6.0462e-01 1.0000e+00 insignificant 1.1790e-01 8.9459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0664849 9.8903e-02 lowCoverage 1.0000e+00 lowCoverage 0.690141 0.753968 -0.09105042 5 0.658933 0.844994 -0.1860617 9.8643e-01 3.5848e-03 weaklyHypometh 1.0000e+00 7.1695e-01 insignificant 9.7601e-01 0.010602 weaklyHypometh 1.0000e+00 1 insignificant -0.1087359 3.6531e-02 lowCoverage 1.000000 lowCoverage 0.627232 0.752000 -0.127748 5 0.622314 0.751991 -0.1296775 9.9926e-01 3.3899e-05 weaklyHypometh 1.0000e+00 1.6950e-03 weaklyHypometh 9.9967e-01 4.2468e-03 weaklyHypometh 1.0000e+00 1.4644e-01 insignificant -0.1752209 3.4225e-03 lowCoverage 0.1711274 lowCoverage chr16 76921976 76922976 139921 WWOX ENSG00000186153 0.919820 372 7 0.754429 93 7 0.630952 20 0 0.937253 302 7 1.000000 12 0 0.8713007 268 7 0.250000 5 0 0.919643 65 4 0.6416667 27 3 0.9761905 45 7 0.926618 177 7 1.000000 14 0 0.834309 82 4 NA 0 0 0.936538 68 7 0.92857 13 0 0.500000 8 0 0.912449 372 7 0.89542 141 7 0.953767 378 7 0.895000 109 4 0.934127 119 4 0.899928 149 7 0.924653 90 4 0.94606 111 4 0.894973 195 7 0.660948 158 4 0.881250 43 4 0.92308 83 7 0.8959393 239 7 0.86524 140 7 0.89204 230 7 0.803896 65 7 0.802934 154 7 0.7304267 143 7 0.83333 12 0 0.84302 55 7 0.8837035 176 7 0.826214 433 7 0.888331 312 7 0.903482 342 7 0.88504 201 7 0.886201 315 7 0.935613 0.880611 0.940476 0.950812 1.000000 0.9228011 0.261905 0.983631 0.781746 1.0000000 0.938293 1.000000 0.959462 NA 0.921245 0.88095 0.797257 0.946899 0.88226 0.925344 0.8704365 0.9344860 0.911497 0.926091 0.9196500 0.956332 0.866807 0.880952 1.00000 0.966681 0.93899 0.95813 0.8826840 0.8718939 0.8248299 0.8333333 0.798280 0.941462 0.893570 0.948814 0.9329119 0.895319 0.918362 0 0.912673 0.893758 0.0209261 7 0.872847 0.888689 -0.0158428 0.0310195 0.539434 weaklyHypermeth 1 1 insignificant 0.194726 0.76270581 insignificant 1 1.00000 insignificant -0.05343969 0.293377 lowCoverage 1 lowCoverage 0.912973 0.831405 0.0783958 7 0.902301 0.818636 0.083665 2.1175e-05 9.9998e-01 weaklyHypermeth 6.0500e-04 1.0000e+00 weaklyHypermeth 2.2192e-03 9.9914e-01 weaklyHypermeth 5.9978e-02 1.0000e+00 weaklyHypermeth 0.0147771 7.6860e-01 lowCoverage 1.0000e+00 lowCoverage 0.912973 0.888334 0.0212631 7 0.902301 0.877681 0.0246197 2.3765e-01 9.8206e-01 insignificant 1.0000e+00 1.000000 insignificant 4.5505e-02 0.99865724 weaklyHypermeth 1.0000e+00 1.00000 insignificant -0.0468571 3.2932e-01 lowCoverage 1.0000e+00 lowCoverage 0.893694 0.831405 0.05534183 7 0.872788 0.818636 0.0541521 8.1440e-04 9.9389e-01 weaklyHypermeth 1.7328e-02 1.0000e+00 weaklyHypermeth 5.9837e-03 9.9682e-01 weaklyHypermeth 1.3008e-01 1.0000e+00 insignificant 0.0682168 3.9246e-02 weaklyHypermeth 8.1763e-01 insignificant 0.893694 0.888334 0.00049519 7 0.872788 0.877681 -0.0048932 2.1822e-01 2.1524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0893e-01 0.550660 insignificant 1.0000e+00 1 insignificant 0.0065826 7.9747e-01 insignificant 1.000000 insignificant 0.831405 0.888334 -0.056352 7 0.818636 0.877681 -0.0590453 9.9905e-01 5.9710e-03 weaklyHypometh 1.0000e+00 1.4571e-01 insignificant 9.9846e-01 4.1560e-02 weaklyHypometh 1.0000e+00 9.0347e-01 insignificant -0.0616342 3.7720e-02 weaklyHypometh 0.9200037 insignificant chr16 77147032 77148032 139974 WWOX ENSG00000186153 0.952527 231 5 0.965271 143 5 0.932576 164 5 0.979211 194 5 0.950000 44 5 0.9532647 133 5 0.940383 101 5 0.955723 137 5 0.9694236 103 5 0.9507353 82 5 0.930212 126 5 0.981818 59 5 0.963636 106 5 NA 0 0 0.946881 167 5 0.96000 27 5 0.960000 50 5 0.969831 298 5 0.97995 102 5 0.955379 128 5 1.000000 51 5 1.000000 59 5 0.965217 115 5 0.966667 60 5 1.00000 45 5 0.995652 237 5 0.835714 35 5 0.963492 53 5 0.98216 165 5 0.9523835 254 5 0.97623 250 5 0.98462 162 5 0.869823 176 5 0.879979 91 5 NA 0 0 0.93333 59 5 0.90490 63 5 0.9285714 183 5 0.963313 324 5 0.966130 292 5 0.962451 427 5 0.96893 259 5 0.964635 252 5 0.952455 0.964642 0.931904 0.979311 0.953620 0.9524188 0.940209 0.956313 0.970775 0.9509083 0.931211 0.981489 0.965446 NA 0.946984 0.95928 0.961086 0.969591 0.98054 0.955702 1.0000000 1.0000000 0.964588 0.966063 1.0000000 0.995967 0.835326 0.964124 0.98239 0.952246 0.97653 0.98434 0.8689747 0.8799364 NA 0.9321267 0.904819 0.927882 0.962951 0.965829 0.9624254 0.968722 0.964343 5 0.958246 0.973755 -0.0154778 5 0.957564 0.973812 -0.0162480 0.9839011 0.019168 weaklyHypometh 1 1 insignificant 0.991380 0.02203476 weaklyHypometh 1 1.00000 insignificant -0.01078365 0.435543 lowCoverage 1 lowCoverage 0.958246 0.900350 0.0576613 5 0.957564 0.900070 0.057493 4.4867e-07 9.9994e-01 weaklyHypermeth 1.5471e-05 1.0000e+00 weaklyHypermeth 7.5339e-05 9.9980e-01 weaklyHypermeth 3.5876e-03 1.0000e+00 weaklyHypermeth 0.0544070 1.0713e-02 lowCoverage 3.1509e-01 lowCoverage 0.958246 0.964607 -0.0059048 5 0.957564 0.964721 -0.0071573 5.0680e-01 2.5604e-01 insignificant 1.0000e+00 1.000000 insignificant 1.9025e-01 0.36687985 insignificant 1.0000e+00 1.00000 insignificant -0.0073645 5.1216e-02 lowCoverage 1.0000e+00 lowCoverage 0.973755 0.900350 0.07338505 5 0.973812 0.900070 0.0737415 2.2637e-09 1.0000e+00 weaklyHypermeth 9.4323e-08 1.0000e+00 weaklyHypermeth 2.0240e-05 1.0000e+00 weaklyHypermeth 1.0120e-03 1.0000e+00 weaklyHypermeth 0.0651906 3.6655e-03 lowCoverage 1.2218e-01 lowCoverage 0.973755 0.964607 0.00940794 5 0.973812 0.964721 0.0090907 9.3594e-02 8.1884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3937e-02 0.985969 weaklyHypermeth 6.3348e-01 1 insignificant 0.0034192 7.9740e-01 insignificant 1.000000 insignificant 0.900350 0.964607 -0.063871 5 0.900070 0.964721 -0.0646508 9.9978e-01 2.8501e-05 weaklyHypometh 1.0000e+00 1.5001e-03 weaklyHypometh 9.9967e-01 2.6358e-03 weaklyHypometh 1.0000e+00 1.2551e-01 insignificant -0.0617715 7.9597e-03 lowCoverage 0.3618066 lowCoverage chr16 77232690 77233690 139994 WWOX ENSG00000186153 0.520228 130 5 0.609934 139 5 0.596879 107 5 0.489091 36 4 0.562273 47 5 0.6153990 87 5 0.503766 119 5 0.538111 89 5 0.4352632 79 5 0.6544974 104 5 0.598268 97 5 0.578095 61 5 0.421185 133 5 NA 0 0 0.585788 111 5 0.61444 55 5 0.318102 148 5 0.466667 43 2 0.76413 106 5 0.293333 158 5 0.881429 36 5 0.117460 36 5 0.812098 130 5 0.469444 37 5 0.41667 7 0 0.541409 168 5 0.483333 63 5 0.711429 61 5 0.30897 111 5 0.6097956 184 5 0.34065 182 5 0.73897 172 5 0.461702 147 5 0.431738 109 5 0.0000000 2 0 0.12000 32 2 0.67431 64 5 0.2438974 192 5 0.088279 144 5 0.141594 150 5 0.058824 90 5 0.14574 119 5 0.151113 97 5 0.488532 0.599592 0.562602 0.438340 0.538867 0.5896713 0.483741 0.499919 0.438787 0.6625067 0.559372 0.541580 0.400805 NA 0.522684 0.59883 0.310833 0.473572 0.73992 0.253426 0.8832816 0.1002415 0.790379 0.394122 0.5254535 0.472451 0.454106 0.659006 0.26071 0.575770 0.29562 0.71532 0.5222348 0.4397931 0.1523954 0.1050725 0.740594 0.232911 0.082375 0.126455 0.0447570 0.125835 0.122043 2 0.530557 0.582140 -0.0447928 5 0.519200 0.560331 -0.0411311 0.8723462 0.106113 insignificant 1 1 insignificant 0.712584 0.29114963 insignificant 1 1.00000 insignificant -0.00094702 0.989414 lowCoverage 1 lowCoverage 0.530557 0.380952 0.1503617 5 0.519200 0.392426 0.126773 2.0372e-05 7.7824e-01 weaklyHypermeth 5.9918e-04 1.0000e+00 weaklyHypermeth 1.2536e-04 9.9818e-01 weaklyHypermeth 5.4503e-03 1.0000e+00 weaklyHypermeth 0.2130820 8.9863e-02 lowCoverage 1.0000e+00 lowCoverage 0.530557 0.118333 0.4053112 5 0.519200 0.119486 0.3997141 3.0004e-18 1.0000e+00 hypermethylated 1.5002e-15 1.000000 hypermethylated 6.3400e-12 1.00000000 hypermethylated 3.1700e-09 1.00000 hypermethylated 0.4179142 5.7207e-11 lowCoverage 5.7207e-08 lowCoverage 0.582140 0.380952 0.19851476 5 0.560331 0.392426 0.1679045 2.4518e-05 8.8904e-01 weaklyHypermeth 7.2111e-04 1.0000e+00 weaklyHypermeth 2.7626e-03 9.9397e-01 weaklyHypermeth 6.5777e-02 1.0000e+00 weaklyHypermeth 0.2140290 1.0763e-01 lowCoverage 1.0000e+00 lowCoverage 0.582140 0.118333 0.45456273 5 0.560331 0.119486 0.4408452 1.6448e-13 1.0000e+00 hypermethylated 4.1120e-11 1.0000e+00 hypermethylated 2.6817e-08 1.000000 hypermethylated 6.7042e-06 1 hypermethylated 0.4188612 3.7322e-05 lowCoverage 0.037322 lowCoverage 0.380952 0.118333 0.254688 5 0.392426 0.119486 0.2729407 4.0691e-06 9.9999e-01 hypermethylated 8.1381e-04 1.0000e+00 hypermethylated 1.0034e-02 9.9991e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.2048322 9.9138e-02 lowCoverage 1.0000000 lowCoverage chr16 77604648 77605648 140060 WWOX ENSG00000186153 0.8809917 294 6 0.846229 424 7 0.9039628 182 6 0.9328172 286 6 0.8283513 110 7 0.8840118 368 7 0.888931 206 7 0.8719028 221 7 0.8722364 144 7 0.9517961 176 7 0.834662 308 7 0.782753 115 6 0.896012 246 6 0.786045 55 5 0.919631 99 7 0.7172619 57 3 0.7372166 720 7 0.738508 169 7 0.936332 123 7 0.870489 172 7 0.8751343 60 7 0.825556 95 5 0.905389 254 7 0.9006002 75 6 0.914094 66 5 0.9211321 349 7 0.8580559 85 7 0.9669739 100 7 0.8908074 178 7 0.9400042 262 7 0.8960728 342 7 0.900948 304 7 0.324427 351 7 0.2570850 95 4 0.3312261 90 2 0.241667 27 4 0.6101978 173 7 0.344818 336 7 0.8973044 318 7 0.9202568 281 7 0.9051705 443 6 0.8915982 132 7 0.950630 209 7 0.852607 0.831292 0.8750621 0.926387 0.7826186 0.882503 0.865539 0.8711818 0.8634781 0.915382 0.8103068 0.783660 0.8815680 0.9125904 0.8909324 0.6701418 0.7015306 0.838417 0.917990 0.8717919 0.826116 0.853959 0.916960 0.8738136 0.8728892 0.9389262 0.865989 0.9792531 0.8901460 0.92617592 0.9132038 0.919954 0.3378828 0.2614024 0.3748326 1.1237e-01 0.755111 0.3432276 0.8864212 0.9034983 0.8916159 0.8801790 0.966369 5 0.826029 0.915668 -8.2480e-02 7 0.847537 0.9073967 -0.05985987 9.9395e-01 2.7866e-04 weaklyHypometh 1.0000000 0.069666 weaklyHypometh 9.8220e-01 7.6550e-03 weaklyHypometh 1.000000 1.0000000 insignificant -0.04555681 0.0215141 weaklyHypometh 1 insignificant 0.825883 0.324627 0.4994647 7 0.804095 0.336246 0.46784842 6.5313e-34 1.0000e+00 hypermethylated 5.4428e-32 1.0000e+00 hypermethylated 4.6638e-12 1.0000e+00 hypermethylated 5.8297e-10 1.0000000 hypermethylated 0.5024370 1.3388e-04 hypermethylated 4.9585e-03 hypermethylated 0.826029 0.9002169 -0.0786490 7 0.847537 0.9105214 -0.0629846 9.9920e-01 0.00284822 weaklyHypometh 1.0000e+00 0.258929 insignificant 8.7430e-01 0.01816940 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0589848 5.0893e-03 weaklyHypometh 1.6417e-01 insignificant 0.915668 0.324930 0.5916560 7 0.9073967 0.384281 0.5231152 1.7610e-31 1.0000e+00 hypermethylated 1.9566e-29 1.0000e+00 hypermethylated 6.3237e-12 1.0000e+00 hypermethylated 1.2647e-09 1.00000 hypermethylated 0.5479938 1.1964e-04 hypermethylated 4.1810e-03 hypermethylated 0.915668 0.9002169 0.01497298 7 0.9073967 0.9105214 -3.1247e-03 2.9254e-01 3.7438e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.6263e-01 0.81614839 insignificant 1.0000e+00 1.00000 insignificant -0.0134280 3.8730e-01 insignificant 1.00000000 insignificant 0.324930 0.9002169 -5.8054e-01 7 0.384281 0.9105214 -0.5262399 1.0000e+00 1.8953e-17 hypomethylated 1.00000000 2.3691e-15 hypomethylated 1.00000000 2.3724e-09 hypomethylated 1.00000 5.9311e-07 hypomethylated -0.56142182 1.0642e-04 hypomethylated 0.0073203 hypomethylated chr16 77878121 77879121 140102 ENSG00000222244 0.6852623 223 6 0.578050 110 7 0.3565341 69 3 0.7090672 193 6 0.5483239 94 5 0.8109555 239 8 0.666386 107 5 0.7680900 120 8 0.6495614 70 3 0.7544757 64 3 0.768354 260 8 0.527826 81 3 0.634218 117 5 0.566667 22 3 0.636842 71 3 0.7695903 66 3 0.5677975 58 3 0.552635 267 6 0.798834 143 8 0.717755 158 8 0.6533099 71 8 0.854798 37 3 0.606797 106 8 0.7788690 62 6 0.742808 86 6 0.6628892 166 8 0.5456168 89 5 0.7147436 39 3 0.6756842 146 8 0.5957460 221 8 0.6700618 173 8 0.823723 137 8 0.124928 227 8 0.0036765 172 8 0.0000000 90 5 0.000000 16 0 0.1164522 119 8 0.000000 186 8 0.4402976 91 5 0.5711226 154 8 0.4553115 107 6 0.7067100 38 3 0.290553 123 6 0.622816 0.643191 0.3036797 0.645000 0.4728727 0.819115 0.593493 0.5991679 0.6218881 0.596371 0.6710754 0.628714 0.3451261 0.4781550 0.5746917 0.6677540 0.6183446 0.387357 0.727796 0.6747941 0.661932 0.660211 0.519451 0.6958050 0.5627362 0.5037871 0.530084 0.7085699 0.6198140 0.31320653 0.4518286 0.813707 0.2136475 0.0030812 0.0000000 1.5776e-02 0.175993 0.0000000 0.3929478 0.4774603 0.2788186 0.4560709 0.303806 1 0.659163 0.635409 2.9828e-02 8 0.691669 0.6831503 0.00851904 3.6114e-01 5.6835e-01 insignificant 1.0000000 1.000000 insignificant 7.1532e-01 2.6630e-01 insignificant 1.000000 1.0000000 insignificant -0.04039256 0.2870381 insignificant 1 insignificant 0.659163 0.060494 0.5990890 8 0.691669 0.054793 0.63687628 1.3090e-50 1.0000e+00 hypermethylated 2.6179e-48 1.0000e+00 hypermethylated 1.0579e-18 1.0000e+00 hypermethylated 5.2893e-16 1.0000000 hypermethylated 0.6125186 1.0135e-11 hypermethylated 2.5337e-09 hypermethylated 0.659163 0.5068226 0.1660957 8 0.691669 0.4859628 0.2057066 8.3586e-09 0.99988448 weaklyHypermeth 4.1793e-07 1.000000 weaklyHypermeth 1.4488e-05 0.99749522 weaklyHypermeth 1.1144e-03 1.000000 weaklyHypermeth 0.1605624 8.1300e-02 insignificant 1.0000e+00 insignificant 0.635409 0.060494 0.5692973 8 0.6831503 0.054793 0.6283572 2.1119e-51 1.0000e+00 hypermethylated 1.0560e-48 1.0000e+00 hypermethylated 8.2536e-17 1.0000e+00 hypermethylated 4.1268e-14 1.00000 hypermethylated 0.6529112 3.7596e-11 hypermethylated 1.2532e-08 hypermethylated 0.635409 0.5068226 0.14477084 8 0.6831503 0.4859628 1.9719e-01 5.5634e-10 9.9801e-01 weaklyHypermeth 5.0576e-08 1.0000000 weaklyHypermeth 2.9341e-06 0.99321983 weaklyHypermeth 4.1916e-04 1.00000 weaklyHypermeth 0.2009550 4.1158e-02 weaklyHypermeth 1.00000000 insignificant 0.060494 0.5068226 -4.1604e-01 8 0.054793 0.4859628 -0.4311697 1.0000e+00 3.7841e-19 hypomethylated 1.00000000 5.4059e-17 hypomethylated 1.00000000 5.8998e-10 hypomethylated 1.00000 1.9666e-07 hypomethylated -0.45195615 1.6489e-03 weaklyHypometh 0.0588886 weaklyHypometh chr16 78003864 78004864 140120 ENSG00000222244 0.7497091 210 7 0.735433 143 7 0.7507578 150 7 0.7545720 139 7 0.7628205 82 6 0.7979395 297 7 0.759062 121 7 0.7615581 145 7 0.6922821 114 7 0.8728823 89 7 0.759397 188 7 0.674424 87 6 0.747609 155 7 1.000000 14 2 0.836813 111 6 0.6697846 69 6 0.6896825 104 6 0.752228 153 7 0.780546 170 7 0.768359 245 7 0.7083333 43 3 0.782479 75 7 0.802964 161 7 0.8283516 72 6 0.651361 52 6 0.7000711 193 7 0.7646774 92 7 0.7004252 59 6 0.8458744 114 7 0.8287819 202 7 0.7887550 198 7 0.830679 326 7 0.625967 125 7 0.7143180 110 7 0.8006803 138 7 0.947318 101 6 0.6970530 99 7 0.657760 161 7 0.8681210 226 7 0.8180019 231 7 0.8025057 201 7 0.7418661 237 7 0.808396 245 7 0.768932 0.768681 0.7775098 0.778386 0.8248150 0.804613 0.772302 0.7912295 0.7215186 0.846123 0.7466342 0.701444 0.7690595 0.8275770 0.8644553 0.6995845 0.7002487 0.792228 0.805943 0.8016938 0.747204 0.809858 0.836100 0.8683531 0.7059764 0.7328040 0.788721 0.7509328 0.8614783 0.83613009 0.8239675 0.844469 0.6499143 0.7413860 0.8340844 9.5123e-01 0.749250 0.6833362 0.8765117 0.8385928 0.8202471 0.7826479 0.832209 6 0.780330 0.805293 -2.6088e-02 7 0.785205 0.8073151 -0.02211023 9.8306e-01 3.0389e-02 weaklyHypometh 1.0000000 1.000000 insignificant 9.5020e-01 1.3795e-01 insignificant 1.000000 1.0000000 insignificant -0.00360304 0.8858273 insignificant 1 insignificant 0.779935 0.754768 0.0236923 7 0.754520 0.733385 0.02113530 5.8152e-02 7.7848e-01 insignificant 3.9830e-01 1.0000e+00 insignificant 4.7222e-01 7.3479e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0252770 6.3518e-01 insignificant 1.0000e+00 insignificant 0.780330 0.8228070 -0.0472293 7 0.785205 0.8294471 -0.0442423 9.9930e-01 0.02687362 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9971e-01 0.01842176 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0419851 1.3744e-01 insignificant 1.0000e+00 insignificant 0.805170 0.754768 0.0496753 7 0.7797886 0.733385 0.0464041 8.8209e-04 9.6602e-01 weaklyHypermeth 8.8209e-03 1.0000e+00 weaklyHypermeth 7.0915e-02 8.9239e-01 insignificant 6.0268e-01 1.00000 insignificant 0.0288800 5.9296e-01 insignificant 1.0000e+00 insignificant 0.805293 0.8228070 -0.02241869 7 0.8073151 0.8294471 -2.2132e-02 7.3787e-01 2.3992e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.5608e-01 0.13234203 insignificant 1.0000e+00 1.00000 insignificant -0.0383821 1.8926e-01 insignificant 1.00000000 insignificant 0.754768 0.8226514 -7.1368e-02 7 0.733385 0.8050824 -0.0716979 9.9879e-01 4.3366e-03 weaklyHypometh 1.00000000 5.1626e-02 weaklyHypometh 0.99911445 3.8365e-02 weaklyHypometh 1.00000 4.5136e-01 insignificant -0.06726211 2.3885e-01 insignificant 1.0000000 insignificant chr16 78706660 78707660 140226 ENSG00000221330 0.6833333 36 4 0.571569 117 5 0.6285714 35 5 0.8333333 60 3 0.6000000 25 4 0.7742915 76 5 0.646667 22 3 0.8010695 67 5 0.6707071 48 5 0.6733333 39 5 0.760917 111 5 0.666667 11 0 0.766667 36 2 0.623232 26 2 0.733333 43 5 0.5000000 2 0 NA 0 0 0.800000 14 2 0.790909 82 5 0.742308 48 3 0.7636364 21 2 1.000000 2 0 0.533333 26 5 0.6857143 38 2 0.616667 20 2 0.8290598 99 5 0.8125000 10 0 0.6515152 27 2 0.7983333 53 5 0.7573099 132 5 0.7318103 106 5 0.766667 45 4 0.749644 86 5 0.6787879 39 3 0.6733333 57 5 0.600000 9 0 0.6544118 45 2 0.767630 72 5 0.7439394 58 5 0.6800000 54 3 0.8416667 64 5 0.7200000 18 3 0.616667 55 4 0.744792 0.594975 0.6785714 0.869792 0.6343750 0.798994 0.583333 0.8390709 0.7256944 0.676042 0.7799349 0.578125 0.7797619 0.6762942 0.7421875 0.6436683 NA 0.852670 0.811648 0.7908654 0.729347 0.836064 0.631250 0.7410714 0.6380208 0.8485577 0.724417 0.8267045 0.8174479 0.77585892 0.7559941 0.817708 0.7540761 0.6865530 0.7135417 6.8750e-01 0.695542 0.7767942 0.7459754 0.7343750 0.8763021 0.7812500 0.630208 0 0.717149 0.782383 -4.0871e-02 5 0.760559 0.6285318 0.13202667 9.9480e-01 1.7816e-01 insignificant 1.0000000 1.000000 insignificant 6.2802e-01 1.8628e-01 insignificant 1.000000 1.0000000 insignificant -0.04728718 0.2510211 lowCoverage 1 lowCoverage 0.716834 0.704545 0.0047499 5 0.712670 0.705815 0.00685508 4.5095e-01 5.5759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7692e-01 3.2713e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0109571 7.4337e-01 lowCoverage 1.0000e+00 lowCoverage 0.716834 0.6947791 -0.0123523 5 0.712670 0.7274573 -0.0147871 8.3729e-01 0.54137922 insignificant 1.0000e+00 1.000000 insignificant 7.4360e-01 0.57130288 insignificant 1.0000e+00 1.000000 insignificant -0.0221962 6.1861e-01 lowCoverage 1.0000e+00 lowCoverage 0.785095 0.704545 0.0451521 5 0.7542382 0.705815 0.0484231 6.6255e-02 9.5827e-01 insignificant 4.5693e-01 1.0000e+00 insignificant 1.7746e-01 8.2312e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0582443 1.9024e-01 lowCoverage 1.0000e+00 lowCoverage 0.785095 0.6947791 0.02731255 5 0.7542382 0.7274573 2.6781e-02 4.0082e-01 9.0861e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.0482e-01 0.72276778 insignificant 1.0000e+00 1.00000 insignificant 0.0250909 6.2926e-01 lowCoverage 1.00000000 lowCoverage 0.704545 0.6947791 -2.4976e-02 5 0.705815 0.7274573 -0.0216422 7.8068e-01 3.5892e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.78892464 5.8698e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03315336 4.8435e-01 lowCoverage 1.0000000 lowCoverage chr16 79111874 79112874 140283 ENSG00000221330 0.8461962 223 6 0.662092 113 5 0.6527778 75 6 0.7870321 113 6 0.9166667 46 6 0.7617260 188 6 0.704525 92 6 0.7629619 70 6 0.7117674 59 6 0.6475677 77 6 0.797878 136 6 0.739087 47 6 0.704715 104 6 NA 0 0 0.843302 96 6 0.8194444 63 6 0.7465914 68 6 0.884433 120 6 0.810766 106 6 0.820965 262 6 0.8634259 32 3 0.795078 72 5 0.768762 114 6 0.7936439 61 6 0.791667 36 3 0.7964906 130 6 0.7763772 59 3 0.7619048 34 3 0.9247793 70 6 0.8134998 140 6 0.6245709 151 6 0.708811 261 6 0.852848 89 6 0.6459945 82 6 0.7301901 106 6 0.922356 75 6 0.8198718 52 6 0.714650 103 6 0.8697708 159 6 0.8469819 227 6 0.8737655 213 6 0.8523841 199 6 0.821491 150 6 0.835816 0.744255 0.6972377 0.767260 0.9008380 0.744071 0.684299 0.7744085 0.7671102 0.646580 0.7867166 0.737031 0.7242355 NA 0.8227105 0.8054004 0.7165214 0.899730 0.781741 0.8348141 0.811918 0.777190 0.778985 0.7638088 0.7835196 0.7948335 0.753063 0.7513966 0.8964338 0.82178771 0.6687151 0.716712 0.8135603 0.6437881 0.6971209 9.1568e-01 0.750645 0.7256891 0.8679779 0.8486823 0.8579669 0.8403938 0.811404 3 0.788630 0.759483 2.4598e-02 6 0.789412 0.7600569 0.02935542 9.5579e-02 9.6616e-01 insignificant 1.0000000 1.000000 insignificant 6.6442e-01 4.0324e-01 insignificant 1.000000 1.0000000 insignificant -0.01541788 0.5818756 lowCoverage 1 lowCoverage 0.788630 0.759369 0.0267633 6 0.789412 0.774524 0.01488878 5.1410e-02 6.7885e-01 insignificant 3.5870e-01 1.0000e+00 insignificant 2.9417e-01 3.8016e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0114854 8.0681e-01 insignificant 1.0000e+00 insignificant 0.788630 0.8575949 -0.0644098 6 0.789412 0.8556024 -0.0661900 9.9787e-01 0.00247803 weaklyHypometh 1.0000e+00 0.258929 insignificant 9.9765e-01 0.00025286 weaklyHypometh 1.0000e+00 0.050573 weaklyHypometh -0.0833790 4.1239e-04 weaklyHypometh 3.4366e-02 weaklyHypometh 0.759483 0.759369 0.0032193 6 0.7600569 0.774524 -0.0144666 3.0659e-01 3.2595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0046e-01 8.6970e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0039325 9.3500e-01 lowCoverage 1.0000e+00 lowCoverage 0.759483 0.8575949 -0.08622753 6 0.7600569 0.8556024 -9.5545e-02 1.0000e+00 8.4286e-05 weaklyHypometh 1.0000e+00 0.0280953 weaklyHypometh 9.8974e-01 0.02268152 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0679611 1.0719e-02 lowCoverage 0.51040595 lowCoverage 0.759369 0.8575949 -9.1263e-02 6 0.774524 0.8556024 -0.0810788 9.9798e-01 1.4253e-03 weaklyHypometh 1.00000000 2.1927e-02 weaklyHypometh 0.99737286 2.0122e-02 weaklyHypometh 1.00000 2.6476e-01 insignificant -0.07189360 1.4705e-01 insignificant 1.0000000 insignificant chr16 80078061 80079061 140300 ENSG00000213288 0.8846877 198 8 0.864495 92 7 0.9299242 116 6 0.8507003 183 8 0.8195435 110 8 0.7561834 250 8 0.947650 33 2 0.9475765 138 8 0.8998512 91 5 0.9326599 82 5 0.793979 193 8 0.947619 38 2 0.926414 116 8 0.863170 77 8 0.961481 69 3 0.6666667 5 0 0.0000000 1 0 0.808073 422 7 0.844160 130 7 0.811757 210 8 0.8575229 95 7 0.953984 83 6 0.799383 94 7 0.8705357 81 6 0.893079 167 7 0.9214595 158 8 0.9097192 126 8 0.8269231 47 3 0.8276027 121 8 0.8316304 126 7 0.9484087 107 7 0.902016 180 8 0.594633 122 8 0.7307240 217 8 0.9213599 136 7 0.786667 56 2 0.6469697 52 5 0.780538 219 8 0.8487143 142 8 0.8817708 110 7 0.9080903 170 8 0.8468013 157 8 0.901366 128 8 0.871064 0.792350 0.8929097 0.960371 0.9320150 0.920033 0.900513 0.9270061 0.9033981 0.938511 0.9089365 0.915418 0.8947931 0.9026006 0.9077213 0.7360584 NA 0.848111 0.900727 0.9003624 0.842841 0.952737 0.908846 0.8952843 0.8373175 0.8611476 0.861368 0.9479910 0.8663558 0.86079290 0.8971243 0.886047 0.4207529 0.8623020 0.6661425 9.7266e-01 0.820874 0.9558876 0.8456678 0.8824029 0.8867757 0.9686305 0.810310 1 0.904239 0.899494 1.6595e-03 8 0.729816 0.7423190 -0.01250341 4.6515e-01 6.9835e-01 insignificant 1.0000000 1.000000 insignificant 6.8119e-01 9.6680e-01 insignificant 1.000000 1.0000000 insignificant -0.05569244 0.2653108 insignificant 1 insignificant 0.905267 0.756554 0.1359312 8 0.917532 0.788434 0.12909787 4.9011e-05 9.9431e-01 weaklyHypermeth 5.1590e-04 1.0000e+00 weaklyHypermeth 3.0749e-02 9.7326e-01 weaklyHypermeth 2.8210e-01 1.0000000 insignificant 0.0793477 2.4840e-01 insignificant 1.0000e+00 insignificant 0.905267 0.9066478 0.0052355 8 0.917532 0.8006565 0.1168755 4.1546e-01 0.48643251 insignificant 1.0000e+00 1.000000 insignificant 1.9569e-01 0.78337007 insignificant 1.0000e+00 1.000000 insignificant -0.0545190 2.7089e-01 insignificant 1.0000e+00 insignificant 0.900797 0.755611 0.1381094 8 0.8907829 0.709591 0.1811922 3.7668e-03 9.9417e-01 weaklyHypermeth 3.2755e-02 1.0000e+00 weaklyHypermeth 9.1387e-02 9.8870e-01 insignificant 7.3699e-01 1.00000 insignificant 0.1350401 3.3864e-02 weaklyHypermeth 4.1298e-01 insignificant 0.900725 0.9066478 0.00925460 8 0.8786476 0.8006565 7.7991e-02 2.1124e-01 5.4174e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.2127e-01 0.74217666 insignificant 1.0000e+00 1.00000 insignificant 0.0011735 9.5289e-01 insignificant 1.00000000 insignificant 0.756554 0.9066478 -1.4003e-01 8 0.788434 0.8006565 -0.0122224 9.2604e-01 3.0870e-02 weaklyHypometh 1.00000000 2.7811e-01 insignificant 0.82950039 1.0012e-01 insignificant 1.00000 1.0000e+00 insignificant -0.13386664 3.5226e-02 weaklyHypometh 0.5032289 insignificant chr16 81748086 81749086 140415 ENSG00000210864 0.9025000 72 5 0.811594 49 5 0.7708333 31 1 0.8503936 101 5 0.7333333 7 0 0.8390523 91 5 0.900000 6 0 0.9777778 37 4 0.9666667 12 1 0.7272727 11 1 0.976190 46 5 0.500000 4 0 0.759740 18 1 NA 0 0 1.000000 21 1 1.0000000 1 0 1.0000000 1 0 0.926653 123 5 0.780952 35 5 0.871762 67 5 0.7500000 13 1 0.584580 46 5 0.750000 28 1 0.7904762 29 5 0.793636 30 4 0.8038095 87 5 0.6972222 37 4 0.7222222 13 1 0.7083333 21 1 0.6548295 80 5 0.7656746 59 5 0.752368 100 5 0.877778 27 1 0.7858974 28 1 0.6922944 82 5 1.000000 5 1 0.8000000 9 0 0.760000 43 3 0.7677922 64 5 0.9397293 115 5 0.9927536 111 5 0.9540373 49 5 0.898259 110 5 0.812500 0.869565 0.3750000 0.969697 0.6666667 0.888889 1.000000 0.8888889 0.8333333 0.727273 1.0000000 0.000000 0.8181818 NA 1.0000000 1.0000000 1.0000000 0.864865 1.000000 1.0000000 1.000000 0.714286 0.750000 1.0000000 0.8181818 0.9285714 0.888889 0.8333333 0.8333333 0.97222222 0.9333333 0.777778 0.8888889 0.8461538 1.0000000 1.0000e+00 1.000000 1.0000000 0.8571429 0.9361702 0.9565217 0.9130435 0.975610 0 0.866303 0.786372 8.1600e-02 5 0.853119 0.7205544 0.13256417 3.1084e-06 9.7425e-01 weaklyHypermeth 0.0031084 1.000000 weaklyHypermeth 2.1770e-05 9.9620e-01 weaklyHypermeth 0.021770 1.0000000 weaklyHypermeth 0.12652083 0.0010630 lowCoverage 1 lowCoverage 0.865837 0.865979 0.0177802 1 0.864990 0.764010 0.10097964 4.8557e-03 7.7571e-01 lowCoverage 4.0804e-02 1.0000e+00 lowCoverage 4.2563e-01 5.9543e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0382886 4.8376e-01 lowCoverage 1.0000e+00 lowCoverage 0.865753 0.9198218 -0.0550194 5 0.832135 0.9375096 -0.1053741 9.9110e-01 0.25387584 insignificant 1.0000e+00 1.000000 insignificant 9.4935e-01 0.72203145 insignificant 1.0000e+00 1.000000 insignificant -0.0528974 3.0438e-01 lowCoverage 1.0000e+00 lowCoverage 0.788679 0.865979 -0.0442220 1 0.7528870 0.764010 -0.0111230 6.3470e-01 1.3575e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6210e-01 5.8891e-02 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0882322 1.0580e-01 lowCoverage 9.5313e-01 lowCoverage 0.785847 0.9198218 -0.13476278 5 0.7044431 0.9375096 -2.3307e-01 9.9930e-01 8.4236e-06 weaklyHypometh 1.0000e+00 0.0065812 weaklyHypometh 9.9800e-01 0.00090822 weaklyHypometh 1.0000e+00 0.22705 insignificant -0.1794183 6.0433e-03 lowCoverage 0.34381268 lowCoverage 0.865979 0.9194631 -6.1582e-02 1 0.764010 0.9125134 -0.1485034 9.4677e-01 4.2102e-02 lowCoverage 1.00000000 3.6611e-01 lowCoverage 0.77248551 5.4336e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.09118607 1.5275e-01 lowCoverage 1.0000000 lowCoverage chr16 83932927 83933927 140456 ENSG00000220991 0.8651859 283 7 0.799668 133 7 0.8486408 164 7 0.8645586 288 7 0.8941940 74 5 0.9175717 247 7 0.833578 183 7 0.9071429 100 7 0.6982242 76 7 0.8987013 94 7 0.887919 264 7 0.813946 36 5 0.853741 183 5 0.809211 88 2 0.853992 171 7 0.8035714 56 5 0.8653199 29 3 0.807820 165 5 0.879936 172 5 0.879489 297 7 0.8660714 47 4 0.774603 78 3 0.914880 170 7 0.6755556 40 5 0.851515 51 3 0.8516023 273 7 0.8904640 130 7 0.8383013 51 3 0.9092315 246 5 0.8485430 180 7 0.9215074 369 7 0.884127 336 7 0.799830 162 7 0.7603226 108 5 0.7060888 255 5 0.682564 31 3 0.8691919 85 7 0.822028 296 7 0.7190033 296 7 0.7706666 249 7 0.7885369 306 7 0.6329016 216 5 0.813861 172 5 0.861147 0.816763 0.7845582 0.812844 0.8488761 0.905768 0.757428 0.8957607 0.5938413 0.890921 0.8499318 0.680604 0.7832273 0.6646396 0.7461608 0.6788618 0.8716147 0.784661 0.849503 0.8206605 0.850440 0.756640 0.906030 0.6210479 0.8442966 0.7863525 0.906135 0.8810715 0.8794152 0.77614320 0.8802286 0.865830 0.8177184 0.7684238 0.6682361 7.5455e-01 0.934795 0.8627600 0.7136917 0.8035991 0.7303592 0.6767980 0.763631 3 0.859446 0.879188 -1.7297e-02 7 0.858014 0.8815433 -0.02352932 9.3910e-01 1.0622e-01 insignificant 1.0000000 1.000000 insignificant 7.9603e-01 8.4717e-02 insignificant 1.000000 1.0000000 insignificant -0.00307977 0.8943553 insignificant 1 insignificant 0.859446 0.785486 0.0813262 7 0.858014 0.793136 0.06487836 1.5698e-09 1.5217e-02 weaklyHypermeth 2.5735e-08 1.0000e+00 weaklyHypermeth 2.9240e-03 1.2721e-01 weaklyHypermeth 3.6099e-02 1.0000000 weaklyHypermeth 0.0757829 4.7089e-02 weaklyHypermeth 5.2909e-01 insignificant 0.859446 0.7828894 0.0829045 7 0.858014 0.7767231 0.0812909 2.8411e-06 0.99325427 weaklyHypermeth 1.1364e-04 1.000000 weaklyHypermeth 7.4019e-04 0.98918754 weaklyHypermeth 2.7414e-02 1.000000 weaklyHypermeth 0.1041266 2.7657e-02 weaklyHypermeth 6.2857e-01 insignificant 0.879188 0.785486 0.0964218 7 0.8815433 0.793136 0.0884077 8.2573e-06 3.8178e-01 weaklyHypermeth 1.0070e-04 1.0000e+00 weaklyHypermeth 7.4136e-02 8.2957e-01 insignificant 6.2299e-01 1.00000 insignificant 0.0788626 4.9090e-02 weaklyHypermeth 5.3945e-01 insignificant 0.879188 0.7828894 0.10572662 7 0.8815433 0.7767231 1.0482e-01 2.3494e-05 1.0000e+00 weaklyHypermeth 8.3908e-04 1.0000000 weaklyHypermeth 1.1073e-04 0.99998767 weaklyHypermeth 6.5133e-03 1.00000 weaklyHypermeth 0.1072064 2.3933e-02 weaklyHypermeth 0.79777193 insignificant 0.785486 0.7828894 9.7408e-03 7 0.793136 0.7767231 0.0164125 1.0118e-02 2.7386e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.00288122 6.6305e-01 weaklyHypermeth 0.96041 1.0000e+00 insignificant 0.02834378 5.2894e-01 insignificant 1.0000000 insignificant chr16 84006471 84007471 140457 ENSG00000220991 0.8295739 176 7 0.719181 121 7 0.6213324 72 7 0.7942419 224 7 0.7867038 96 7 0.9263049 81 4 0.837075 82 6 0.8925112 74 6 0.5857143 65 5 0.8380952 75 5 0.646591 158 7 0.611111 44 4 0.890909 32 2 0.679924 45 5 0.846429 61 6 0.7500000 25 3 1.0000000 1 0 0.833162 208 6 0.923810 108 5 0.675392 125 7 0.6312500 27 4 0.711111 72 5 0.788602 121 5 0.8013468 56 4 0.724172 158 6 0.8933070 139 7 0.6087421 127 6 0.4683333 28 3 0.9196946 84 5 0.8732408 157 7 0.9060929 113 6 0.847174 94 7 0.575833 79 7 0.4271837 197 6 0.4284098 186 7 0.468025 75 4 0.4842542 111 7 0.825495 115 7 0.7232845 138 7 0.8534895 123 5 0.6102766 186 7 0.6428571 50 5 0.699357 150 7 0.863805 0.726849 0.6092494 0.849455 0.8768514 0.896669 0.796471 0.9344388 0.6508929 0.845238 0.7763303 0.909722 0.9482758 0.7107684 0.8468750 0.9188943 NA 0.837383 0.950595 0.8383382 0.868409 0.732348 0.894564 0.7724567 0.8694273 0.8619635 0.826363 0.6836310 0.8647126 0.90783747 0.8806722 0.886408 0.4577594 0.4389726 0.4698705 5.9516e-01 0.457408 0.8583111 0.6838605 0.8045635 0.4694377 0.4880952 0.706103 3 0.829594 0.828352 -1.3385e-02 7 0.749280 0.7839284 -0.03464825 9.5985e-01 2.0518e-01 insignificant 1.0000000 1.000000 insignificant 9.0880e-01 2.5760e-01 insignificant 1.000000 1.0000000 insignificant 0.01998075 0.6835126 insignificant 1 insignificant 0.829594 0.520997 0.3046003 7 0.749280 0.517226 0.23205393 2.7245e-18 5.5380e-01 hypermethylated 7.5680e-17 1.0000e+00 hypermethylated 3.1058e-06 9.3424e-01 hypermethylated 8.3940e-05 1.0000000 hypermethylated 0.2495362 7.9162e-03 weaklyHypermeth 1.2977e-01 insignificant 0.830745 0.7461300 0.1695860 7 0.784208 0.7705541 0.0136542 2.0246e-07 0.87335906 weaklyHypermeth 9.2025e-06 1.000000 weaklyHypermeth 3.5950e-04 0.94437400 weaklyHypermeth 1.5631e-02 1.000000 weaklyHypermeth 0.0785501 1.5433e-01 insignificant 1.0000e+00 insignificant 0.826235 0.521625 0.2959473 7 0.7186011 0.557457 0.1611437 2.0440e-12 8.8731e-01 hypermethylated 5.3789e-11 1.0000e+00 hypermethylated 5.3727e-05 8.1961e-01 hypermethylated 1.1939e-03 1.00000 hypermethylated 0.2295554 1.2269e-02 weaklyHypermeth 1.8849e-01 insignificant 0.827498 0.7465224 0.18193605 7 0.7536254 0.7914128 -3.7787e-02 3.0103e-06 9.9438e-01 weaklyHypermeth 1.3088e-04 1.0000000 weaklyHypermeth 7.1908e-04 0.96734894 weaklyHypermeth 2.8076e-02 1.00000 weaklyHypermeth 0.0585693 3.3582e-01 insignificant 1.00000000 insignificant 0.522310 0.7465224 -1.6882e-01 7 0.608135 0.7914128 -0.1832774 9.6126e-01 5.0543e-02 insignificant 1.00000000 4.2833e-01 insignificant 0.97956817 1.5825e-01 insignificant 1.00000 1.0000e+00 insignificant -0.17098609 5.0660e-02 insignificant 0.6402282 insignificant chr16 84052587 84053587 140458 ENSG00000220991 0.0400885 318 4 0.088121 136 5 0.1019403 162 4 0.0211076 288 5 0.0064516 78 5 0.0401449 244 4 0.029759 147 5 0.0666667 115 4 0.0259701 174 4 0.0177140 157 4 0.041955 161 5 0.057181 123 4 0.206667 129 4 0.000000 14 1 0.038715 136 4 0.0724074 110 4 0.0198413 139 4 0.033139 243 4 0.034812 90 4 0.014657 204 4 0.0375000 50 5 0.000000 157 4 0.052020 143 5 0.0990741 86 5 0.034646 176 5 0.0047619 232 5 0.0039683 111 4 0.0000000 36 2 0.1796053 104 4 0.0309244 213 5 0.0436364 197 5 0.096347 267 4 0.000000 58 5 0.1443254 170 4 0.0000000 183 4 0.053571 73 4 0.1519037 62 4 0.018008 139 5 0.0061169 365 4 0.0090000 292 5 0.0015038 338 4 0.0000000 308 4 0.027102 285 4 0.053624 0.045888 0.0693825 0.028062 0.0149138 0.046078 0.013248 0.0000000 0.0346913 0.028008 0.0389979 0.082347 0.0054795 0.0200098 0.0561821 0.0929890 0.0196673 0.051693 0.052238 0.0290081 0.072346 0.000000 0.088194 0.0345320 0.0280199 0.0110078 0.011008 0.0000000 0.0202100 0.00543916 0.0037983 0.122940 0.0000000 0.1297966 0.0078685 3.5225e-02 0.074169 0.0163360 0.0071258 0.0111525 0.0034762 0.0000000 0.035690 4 0.038875 0.037351 4.7436e-03 4 0.053099 0.0441258 0.00897331 4.7649e-01 8.8136e-01 lowCoverage 1.0000000 1.000000 lowCoverage 1.9313e-01 9.6689e-01 lowCoverage 1.000000 1.0000000 lowCoverage -0.00067347 0.9712891 lowCoverage 1 lowCoverage 0.038875 0.059942 -0.0187639 4 0.053099 0.080209 -0.02710965 2.4400e-01 1.1713e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6101e-01 7.5507e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0134345 6.7305e-01 lowCoverage 1.0000e+00 lowCoverage 0.038875 0.0094458 0.0279318 4 0.053099 0.0088668 0.0442323 2.2739e-03 0.99986862 lowCoverage 5.5460e-02 1.000000 lowCoverage 8.9547e-03 0.99958056 lowCoverage 2.3565e-01 1.000000 lowCoverage 0.0391223 2.1564e-03 lowCoverage 9.3758e-02 lowCoverage 0.037853 0.059854 -0.0219414 5 0.0923271 0.066841 0.0254864 5.8617e-01 2.8765e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2869e-01 5.2281e-01 insignificant 1.0000e+00 1.00000 insignificant -0.0127611 7.0472e-01 lowCoverage 1.0000e+00 lowCoverage 0.037351 0.0094458 0.02472896 4 0.0441258 0.0088668 3.5259e-02 2.9632e-02 9.9789e-01 lowCoverage 4.5601e-01 1.0000000 lowCoverage 2.0109e-01 0.91300121 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0397958 2.8485e-02 lowCoverage 0.89014353 lowCoverage 0.059942 0.0094458 4.8315e-02 4 0.080209 0.0088668 0.0713420 8.5538e-02 9.8778e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.39285126 9.3279e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.05255685 1.2669e-01 lowCoverage 1.0000000 lowCoverage chr16 84307504 84308504 140464 GINS2 ENSG00000131153 0.8693401 204 5 0.736906 227 5 0.8378264 232 5 0.8587519 198 5 0.8945210 208 5 0.9230050 478 5 0.919781 324 5 0.9090909 183 5 0.8105747 148 5 0.9068921 195 5 0.849467 232 5 0.906787 103 5 0.888571 173 5 0.875656 159 5 0.720416 246 5 0.7774436 80 5 NA 0 0 0.777273 211 5 0.885764 272 5 0.737138 380 5 0.8804004 110 5 0.925000 22 2 0.874192 194 5 0.9619048 59 5 0.806667 36 3 0.7724309 271 5 0.6947168 282 5 0.7915385 85 5 0.9024428 277 5 0.9063471 291 5 0.8751532 294 5 0.885916 449 5 0.703358 205 5 0.8791982 397 5 0.8000000 347 5 1.000000 30 3 0.7123319 183 5 0.396597 347 5 0.8789176 252 5 0.8692715 237 5 0.8051196 245 5 0.7192950 278 5 0.915911 188 5 0.872537 0.741690 0.8398790 0.862030 0.8995727 0.924673 0.920935 0.9053318 0.8136798 0.910277 0.8484266 0.910538 0.8879199 0.8783943 0.8702035 0.7807635 NA 0.781026 0.890669 0.8874960 0.884070 0.930018 0.875617 0.9639504 0.7974178 0.8845462 0.837738 0.8028440 0.9046383 0.90973292 0.8769040 0.886918 0.8488917 0.8841210 0.8133803 8.7906e-01 0.763022 0.3930594 0.8797200 0.8672516 0.8047987 0.7231012 0.918283 5 0.870619 0.878430 -7.7434e-03 5 0.724999 0.7306743 -0.00567497 9.3047e-01 6.0422e-01 insignificant 1.0000000 1.000000 insignificant 9.9036e-01 2.6794e-01 insignificant 1.000000 1.0000000 insignificant -0.00980264 0.7161912 lowCoverage 1 lowCoverage 0.870619 0.746021 0.1311269 5 0.724999 0.697209 0.02778992 4.3728e-04 9.9995e-01 weaklyHypermeth 4.1253e-03 1.0000e+00 weaklyHypermeth 1.7781e-01 2.3042e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0980088 2.9835e-01 lowCoverage 1.0000e+00 lowCoverage 0.870824 0.8308333 0.0367489 5 0.869999 0.8375609 0.0324383 1.1777e-02 0.18693077 weaklyHypermeth 2.2648e-01 1.000000 insignificant 3.8256e-02 0.11159663 weaklyHypermeth 7.6512e-01 1.000000 insignificant 0.0088868 8.2243e-01 lowCoverage 1.0000e+00 lowCoverage 0.878481 0.745527 0.1362089 5 0.7691494 0.597608 0.1715413 6.7539e-03 9.9999e-01 weaklyHypermeth 5.4909e-02 1.0000e+00 weaklyHypermeth 2.4325e-01 8.2043e-01 insignificant 1.0000e+00 1.00000 insignificant 0.1078114 2.6141e-01 lowCoverage 1.0000e+00 lowCoverage 0.879544 0.8308333 0.04744189 5 0.8768091 0.8375609 3.9248e-02 2.1415e-03 3.0929e-01 weaklyHypermeth 4.8672e-02 1.0000000 weaklyHypermeth 5.0001e-02 0.66197944 insignificant 9.0912e-01 1.00000 insignificant 0.0186895 6.6038e-01 lowCoverage 1.00000000 lowCoverage 0.746348 0.8308333 -8.2443e-02 5 0.736651 0.8375609 -0.1009096 9.5453e-01 8.3509e-02 insignificant 1.00000000 6.6807e-01 insignificant 0.53533252 3.3225e-01 insignificant 1.00000 1.0000e+00 insignificant -0.08912194 3.5967e-01 lowCoverage 1.0000000 lowCoverage chr16 85501237 85502237 140482 FOXL1 ENSG00000176678 0.8755440 193 6 0.539828 174 4 0.6133333 18 2 0.8239641 216 4 0.9375000 16 0 0.7265348 225 6 0.638095 16 1 0.8075499 57 4 0.6666667 7 0 1.0000000 16 0 0.928789 222 6 NA 0 0 1.000000 17 0 0.611111 15 1 0.833333 10 1 NA 0 0 NA 0 0 0.569238 149 6 0.957018 51 4 0.867228 144 4 0.9841270 34 4 0.633333 24 2 0.625000 34 4 0.8333333 39 4 0.859504 94 4 0.8472828 203 6 0.8333333 22 2 1.0000000 1 0 0.7956349 43 6 0.8998810 145 6 0.9214673 165 4 0.888281 179 6 0.310513 157 6 0.2785436 66 6 0.4274377 168 3 0.061404 91 3 0.3121516 84 5 0.138909 218 6 0.6863018 99 6 0.6901024 228 6 0.6048458 339 6 0.6111111 33 2 0.558797 194 6 0.946405 0.906844 0.4358974 0.909447 0.8076923 0.848805 0.937729 0.8855358 0.9230769 1.000000 0.8882874 NA 1.0000000 0.9743590 0.8333333 NA NA 0.869107 0.910931 0.8941051 0.991453 0.986205 0.807692 1.0000000 0.9576366 0.9167492 0.743590 NA 0.7838828 0.99224359 0.9165407 0.872642 0.4362130 0.5438275 0.1604745 0.0000e+00 0.577518 0.2046954 0.8109391 0.8322868 0.7790223 0.9743590 0.634829 0 0.847249 0.894898 -5.8334e-02 4 0.703948 0.8855695 -0.18162123 1.0000e+00 2.6263e-02 lowCoverage 1.0000000 1.000000 lowCoverage 9.9858e-01 2.7035e-01 lowCoverage 1.000000 1.0000000 lowCoverage -0.05544722 0.2841173 lowCoverage 1 lowCoverage 0.847249 0.318414 0.4654804 4 0.703948 0.244457 0.45949077 8.6432e-20 1.0000e+00 lowCoverage 2.6191e-18 1.0000e+00 lowCoverage 7.3374e-09 1.0000e+00 lowCoverage 4.0763e-07 1.0000000 lowCoverage 0.5331579 8.7602e-06 lowCoverage 4.3801e-04 lowCoverage 0.847798 0.7513998 0.0817829 4 0.804512 0.6576292 0.1468831 7.5493e-04 0.99981868 lowCoverage 2.0403e-02 1.000000 lowCoverage 1.5325e-02 0.99977478 lowCoverage 3.6487e-01 1.000000 lowCoverage 0.1577527 2.6807e-03 lowCoverage 1.1169e-01 lowCoverage 0.894791 0.318822 0.5343100 5 0.8692223 0.279380 0.5898423 1.8378e-22 1.0000e+00 hypermethylated 9.1888e-21 1.0000e+00 hypermethylated 8.8765e-11 1.0000e+00 hypermethylated 9.8628e-09 1.00000 hypermethylated 0.5886051 6.7060e-06 lowCoverage 3.9456e-04 lowCoverage 0.894683 0.7508418 0.16018114 5 0.8474260 0.6005674 2.4686e-01 5.9754e-11 1.0000e+00 weaklyHypermeth 5.9754e-09 1.0000000 weaklyHypermeth 3.0413e-05 0.99999843 weaklyHypermeth 2.5344e-03 1.00000 weaklyHypermeth 0.2132000 1.6342e-04 lowCoverage 0.02723735 lowCoverage 0.318822 0.7513998 -3.6795e-01 6 0.279380 0.6576292 -0.3782492 9.9999e-01 1.0446e-06 hypomethylated 1.00000000 2.9018e-05 hypomethylated 0.99941547 7.0739e-05 hypomethylated 1.00000 3.2154e-03 hypomethylated -0.37540516 4.0409e-04 lowCoverage 0.0184375 lowCoverage chr16 85782980 85783980 140491 FOXL1 ENSG00000176678 0.6258913 114 2 0.612022 215 5 0.4871795 55 4 0.8459770 91 4 0.8333333 39 3 0.7217204 192 5 0.858889 58 2 0.8670635 82 4 0.7670807 51 5 0.8538961 46 4 0.823219 155 5 0.641026 26 2 0.749586 99 4 0.903759 43 4 0.711111 54 4 0.8333333 13 1 0.5000000 5 0 0.680584 121 4 0.784289 180 4 0.807078 172 3 0.8018707 52 4 0.817857 42 3 0.735187 88 5 0.4531250 47 2 0.755682 39 3 0.6510170 234 5 0.6592593 42 3 0.4833333 23 2 0.8435714 175 4 0.8772155 217 5 0.9255020 223 5 0.832967 147 5 0.509457 136 5 0.8886451 111 4 0.4533333 124 4 NA 0 0 0.6170868 98 5 0.711608 217 5 0.5804628 134 3 0.9569106 116 3 0.7800177 111 3 0.8160920 121 1 0.876491 80 3 0.840139 0.830959 0.7651515 0.886799 1.0000000 0.915667 0.883838 0.8539322 0.7517567 0.956316 0.9599055 0.831002 0.8822265 0.9356345 0.9090909 1.0000000 0.8865040 0.745527 0.942036 0.8737201 0.854527 0.922583 0.894269 0.7689394 0.8842975 0.9395295 0.861953 0.6767677 0.8326118 0.89831945 0.9194638 0.908822 0.7028086 0.8647341 0.6787879 NA 0.814914 0.7071412 0.7319220 0.9300320 0.8916620 0.7965866 0.843913 1 0.882385 0.879609 -5.3882e-03 5 0.790863 0.7122357 0.07862777 6.5709e-01 6.0231e-01 insignificant 1.0000000 1.000000 insignificant 1.8370e-01 9.6729e-01 insignificant 1.000000 1.0000000 insignificant 0.00896969 0.8618727 lowCoverage 1 lowCoverage 0.882385 0.727405 0.1276163 5 0.790863 0.480047 0.31081621 9.9973e-04 9.9406e-01 weaklyHypermeth 9.2567e-03 1.0000e+00 weaklyHypermeth 8.5323e-02 9.6570e-01 insignificant 7.0515e-01 1.0000000 insignificant 0.1093260 2.3883e-01 lowCoverage 1.0000e+00 lowCoverage 0.890827 0.9092527 0.0135937 3 0.838243 0.7561655 0.0820779 1.0788e-01 0.70708888 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.1315e-01 0.53035983 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0566429 4.4245e-01 lowCoverage 1.0000e+00 lowCoverage 0.879609 0.727405 0.1639105 5 0.7122357 0.480047 0.2321884 5.8348e-04 9.9799e-01 weaklyHypermeth 6.1419e-03 1.0000e+00 weaklyHypermeth 3.3576e-01 8.4551e-01 insignificant 1.0000e+00 1.00000 insignificant 0.1003563 2.9576e-01 lowCoverage 1.0000e+00 lowCoverage 0.884674 0.9092527 0.01856459 3 0.8526856 0.7561655 9.6520e-02 8.0113e-02 9.1408e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.5533e-01 0.40037040 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0656126 4.1494e-01 lowCoverage 1.00000000 lowCoverage 0.733824 0.9092527 -8.3131e-02 3 0.672066 0.7561655 -0.0840993 9.2224e-01 1.6628e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.97094588 2.7509e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.16596892 1.3589e-01 lowCoverage 1.0000000 lowCoverage chr16 87058188 87059188 140497 ZFPM1 ENSG00000179588 0.8533333 20 3 0.848764 134 5 0.6951609 151 5 1.0000000 8 0 0.9610753 120 5 0.8800000 21 3 0.769289 85 4 0.8535023 129 5 0.8868392 86 4 0.9133240 133 5 0.901207 183 5 0.495556 62 5 0.948777 143 5 NA 0 0 0.965829 124 5 0.6192424 42 4 0.6670588 74 5 0.750000 8 0 0.908808 156 5 1.000000 32 5 0.9012821 50 4 1.000000 4 0 0.985714 55 5 1.0000000 40 4 1.000000 4 0 0.8762935 123 5 1.0000000 18 2 0.9777778 33 4 0.8745325 175 5 0.9354078 152 5 0.9284444 104 5 0.840000 20 3 0.785724 177 5 0.9551293 200 5 0.5736607 127 4 1.000000 4 0 0.8456710 53 5 0.670941 97 5 0.8833333 36 4 0.6761905 40 4 0.9500000 16 0 1.0000000 8 0 0.700000 11 0 0.842593 0.828015 0.7086331 0.975041 0.9459379 0.833333 0.824410 0.8599718 0.8626735 0.896978 0.8948546 0.501543 0.9333374 NA 0.9671603 0.5579756 0.6070261 0.719285 0.927040 1.0000000 0.916845 0.997448 0.980159 1.0000000 0.9974484 0.8930663 1.000000 0.9691358 0.9296522 0.93991817 0.9422840 0.777778 0.7536759 0.9556534 0.6964261 9.9530e-01 0.785654 0.5490119 0.9004630 0.6732804 0.9305556 0.9727183 0.652778 0 0.848042 0.931877 -8.3311e-02 5 0.854679 0.9268200 -0.07214152 9.9833e-01 2.6349e-04 weaklyHypometh 1.0000000 0.069666 weaklyHypometh 9.9677e-01 1.6155e-05 weaklyHypometh 1.000000 0.0080774 weaklyHypometh -0.10551056 0.0067830 lowCoverage 1 lowCoverage 0.848042 0.767477 0.0752247 5 0.854679 0.768810 0.08586840 2.5908e-02 8.3712e-01 weaklyHypermeth 1.8774e-01 1.0000e+00 insignificant 5.6606e-01 3.7740e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0325896 6.7213e-01 lowCoverage 1.0000e+00 lowCoverage 0.848042 0.8018018 0.0481854 3 0.854679 0.8069444 0.0477341 1.5904e-01 0.95316890 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.1718e-01 0.30395752 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0041276 9.5663e-01 lowCoverage 1.0000e+00 lowCoverage 0.931877 0.767477 0.1551604 5 0.9268200 0.768810 0.1580099 4.5067e-04 9.9993e-01 weaklyHypermeth 4.7943e-03 1.0000e+00 weaklyHypermeth 1.5946e-02 9.9487e-01 weaklyHypermeth 1.6785e-01 1.00000 insignificant 0.1381001 9.5038e-02 lowCoverage 8.7890e-01 lowCoverage 0.931877 0.8018018 0.12817696 3 0.9268200 0.8069444 1.1988e-01 8.4030e-05 9.9989e-01 lowCoverage 2.6259e-03 1.0000000 lowCoverage 1.1473e-01 0.94879916 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.1013829 2.0034e-01 lowCoverage 1.00000000 lowCoverage 0.767477 0.8018018 -3.2659e-02 3 0.768810 0.8069444 -0.0381343 6.6391e-01 4.9802e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.93878244 2.8088e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.03671721 7.0418e-01 lowCoverage 1.0000000 lowCoverage chr16 87058393 87059393 140498 ZFPM1 ENSG00000179588 0.8533333 20 3 0.848764 134 5 0.6951609 151 5 1.0000000 8 0 0.9610753 120 5 0.8800000 21 3 0.769289 85 4 0.8535023 129 5 0.8868392 86 4 0.9133240 133 5 0.901207 183 5 0.495556 62 5 0.948777 143 5 NA 0 0 0.965829 124 5 0.6192424 42 4 0.6670588 74 5 0.750000 8 0 0.908808 156 5 1.000000 32 5 0.9012821 50 4 1.000000 4 0 0.985714 55 5 1.0000000 40 4 1.000000 4 0 0.8762935 123 5 1.0000000 18 2 0.9777778 33 4 0.8745325 175 5 0.9354078 152 5 0.9284444 104 5 0.840000 20 3 0.785724 177 5 0.9551293 200 5 0.5736607 127 4 1.000000 4 0 0.8456710 53 5 0.670941 97 5 0.8833333 36 4 0.6761905 40 4 0.9500000 16 0 1.0000000 8 0 0.700000 11 0 0.842593 0.828015 0.7086331 0.975041 0.9459379 0.833333 0.824410 0.8599718 0.8626735 0.896978 0.8948546 0.501543 0.9333374 NA 0.9671603 0.5579756 0.6070261 0.719285 0.927040 1.0000000 0.916845 0.997448 0.980159 1.0000000 0.9974484 0.8930663 1.000000 0.9691358 0.9296522 0.93991817 0.9422840 0.777778 0.7536759 0.9556534 0.6964261 9.9530e-01 0.785654 0.5490119 0.9004630 0.6732804 0.9305556 0.9727183 0.652778 0 0.848042 0.931877 -8.3311e-02 5 0.854679 0.9268200 -0.07214152 9.9833e-01 2.6349e-04 weaklyHypometh 1.0000000 0.069666 weaklyHypometh 9.9677e-01 1.6155e-05 weaklyHypometh 1.000000 0.0080774 weaklyHypometh -0.10551056 0.0067830 lowCoverage 1 lowCoverage 0.848042 0.767477 0.0752247 5 0.854679 0.768810 0.08586840 2.5908e-02 8.3712e-01 weaklyHypermeth 1.8774e-01 1.0000e+00 insignificant 5.6606e-01 3.7740e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0325896 6.7213e-01 lowCoverage 1.0000e+00 lowCoverage 0.848042 0.8018018 0.0481854 3 0.854679 0.8069444 0.0477341 1.5904e-01 0.95316890 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.1718e-01 0.30395752 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0041276 9.5663e-01 lowCoverage 1.0000e+00 lowCoverage 0.931877 0.767477 0.1551604 5 0.9268200 0.768810 0.1580099 4.5067e-04 9.9993e-01 weaklyHypermeth 4.7943e-03 1.0000e+00 weaklyHypermeth 1.5946e-02 9.9487e-01 weaklyHypermeth 1.6785e-01 1.00000 insignificant 0.1381001 9.5038e-02 lowCoverage 8.7890e-01 lowCoverage 0.931877 0.8018018 0.12817696 3 0.9268200 0.8069444 1.1988e-01 8.4030e-05 9.9989e-01 lowCoverage 2.6259e-03 1.0000000 lowCoverage 1.1473e-01 0.94879916 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.1013829 2.0034e-01 lowCoverage 1.00000000 lowCoverage 0.767477 0.8018018 -3.2659e-02 3 0.768810 0.8069444 -0.0381343 6.6391e-01 4.9802e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.93878244 2.8088e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.03671721 7.0418e-01 lowCoverage 1.0000000 lowCoverage chr16 87073042 87074042 140499 ZFPM1 ENSG00000179588 0.9653595 87 5 0.816996 71 5 0.7648276 149 5 0.9632576 161 5 0.9600000 75 5 0.8785821 206 5 0.871930 94 5 0.9533333 150 5 0.8298246 94 5 0.9452174 107 5 0.888577 270 5 1.000000 10 0 0.957895 95 5 0.916176 83 5 0.854545 110 5 1.0000000 30 5 NA 0 0 0.891667 128 5 0.951196 203 5 0.924544 154 5 1.0000000 91 5 0.750000 35 5 0.897222 87 5 0.9639706 83 5 1.000000 15 0 0.8915675 176 5 0.9610546 225 5 0.7223810 29 4 0.9520000 124 5 0.9205385 124 5 0.9504261 100 5 0.958157 190 5 0.598024 112 5 0.8227706 103 5 0.0055556 183 5 NA 0 0 0.7420455 88 5 0.864833 169 5 0.9111111 45 5 0.9529412 85 5 0.8858225 115 5 0.7975524 59 5 0.841304 119 5 0.963370 0.813745 0.7692384 0.962516 0.9625899 0.881203 0.869241 0.9549161 0.8318188 0.940882 0.8885351 1.000000 0.9602423 0.9175571 0.8590582 1.0000000 NA 0.892501 0.952669 0.9258676 1.000000 0.761048 0.898681 0.9602730 1.0000000 0.8909331 0.964854 0.7242549 0.9470504 0.91786663 0.9490020 0.957686 0.5969943 0.8359463 0.0051958 NA 0.739617 0.8716431 0.9224620 0.9517562 0.8865505 0.7878536 0.844333 4 0.903821 0.932760 -2.8874e-02 5 0.904068 0.9329945 -0.02892689 9.9622e-01 4.1424e-02 weaklyHypometh 1.0000000 1.000000 insignificant 9.2919e-01 2.9177e-01 insignificant 1.000000 1.0000000 insignificant -0.00163114 0.9569714 lowCoverage 1 lowCoverage 0.903821 0.557252 0.3467368 5 0.904068 0.558066 0.34600211 4.5917e-12 1.0000e+00 hypermethylated 8.6636e-11 1.0000e+00 hypermethylated 2.5346e-06 9.9791e-01 hypermethylated 7.2418e-05 1.0000000 hypermethylated 0.3056663 1.2340e-01 lowCoverage 1.0000e+00 lowCoverage 0.903821 0.8770686 0.0268207 5 0.904068 0.8771817 0.0268860 1.2938e-01 0.92391918 insignificant 1.0000e+00 1.000000 insignificant 1.1404e-01 0.85964371 insignificant 1.0000e+00 1.000000 insignificant 0.0345657 3.0046e-01 lowCoverage 1.0000e+00 lowCoverage 0.932760 0.557252 0.3755658 5 0.9329945 0.558066 0.3749290 5.3883e-09 1.0000e+00 hypermethylated 9.9783e-08 1.0000e+00 hypermethylated 2.7147e-05 9.9997e-01 hypermethylated 7.5408e-04 1.00000 hypermethylated 0.3072974 1.2196e-01 lowCoverage 1.0000e+00 lowCoverage 0.932760 0.8770686 0.05573059 5 0.9329945 0.8771817 5.5813e-02 1.4429e-02 9.9597e-01 weaklyHypermeth 2.6234e-01 1.0000000 insignificant 1.5329e-01 0.96669040 insignificant 1.0000e+00 1.00000 insignificant 0.0361968 3.5384e-01 lowCoverage 1.00000000 lowCoverage 0.557252 0.8770686 -3.1971e-01 5 0.558066 0.8771817 -0.3191161 9.9995e-01 1.9504e-03 weaklyHypometh 1.00000000 2.7470e-02 weaklyHypometh 0.99996165 3.6637e-03 weaklyHypometh 1.00000 7.3273e-02 weaklyHypometh -0.27110062 1.6004e-01 lowCoverage 1.0000000 lowCoverage chr16 87093477 87094477 140500 ZFPM1 ENSG00000179588 0.8340432 349 16 0.800686 374 16 0.7778165 406 19 0.8543810 288 13 0.8632443 194 16 0.8480602 444 18 0.815945 428 20 0.7109840 282 15 0.7726473 289 19 0.8612038 356 20 0.880269 561 20 0.675010 294 16 0.751922 442 19 NA 0 0 0.833153 360 19 0.7625996 183 13 0.5983060 228 13 0.844766 372 17 0.858258 369 19 0.833499 448 19 0.8414022 286 17 0.658507 170 13 0.884004 357 19 0.7938204 187 15 0.895926 120 10 0.8279278 374 17 0.7197571 272 19 0.7815102 180 14 0.8238044 330 18 0.7895485 431 20 0.8927853 390 17 0.923744 529 19 0.660048 347 16 0.5857140 457 19 0.8038826 371 14 0.689372 192 12 0.6866666 251 19 0.728971 401 19 0.8276374 411 16 0.8316608 443 19 0.7542097 377 17 0.6898736 422 17 0.803472 358 15 0.871760 0.772256 0.7802294 0.883363 0.9056095 0.874865 0.840740 0.8214896 0.7879274 0.901631 0.8682039 0.670252 0.7846704 NA 0.8366850 0.7470206 0.5985673 0.828218 0.913842 0.8400567 0.869008 0.707931 0.862251 0.8547214 0.8206769 0.8494913 0.820071 0.8911312 0.8707842 0.81754510 0.8839439 0.928423 0.7142397 0.7107204 0.8798842 7.6620e-01 0.775155 0.7318153 0.8277008 0.8488252 0.7577497 0.7010549 0.843834 9 0.799310 0.838114 -3.3461e-02 18 0.768895 0.7785895 -0.00969487 9.3489e-01 6.1044e-02 insignificant 1.0000000 1.000000 insignificant 9.7666e-01 5.9154e-02 insignificant 1.000000 1.0000000 insignificant -0.02061614 0.4688293 insignificant 1 insignificant 0.799280 0.700842 0.0934411 19 0.758390 0.660444 0.09794566 1.8179e-16 6.0318e-01 weaklyHypermeth 4.4339e-15 1.0000e+00 weaklyHypermeth 3.4403e-05 2.0750e-01 weaklyHypermeth 7.0209e-04 1.0000000 weaklyHypermeth 0.1063362 1.3077e-02 weaklyHypermeth 1.8162e-01 insignificant 0.799400 0.7802089 0.0223906 17 0.794504 0.7924213 0.0020824 1.8680e-02 0.86748355 weaklyHypermeth 3.4592e-01 1.000000 insignificant 9.3935e-02 0.91886053 insignificant 1.0000e+00 1.000000 insignificant 0.0174078 5.9764e-01 insignificant 1.0000e+00 insignificant 0.838763 0.700842 0.1290916 18 0.8026163 0.660444 0.1421721 2.6158e-11 9.9709e-01 weaklyHypermeth 5.5655e-10 1.0000e+00 weaklyHypermeth 4.2748e-04 9.6677e-01 weaklyHypermeth 7.2454e-03 1.00000 weaklyHypermeth 0.1269524 5.8515e-03 weaklyHypermeth 1.0431e-01 insignificant 0.838719 0.7802089 0.05257081 16 0.7932171 0.7924213 7.9580e-04 1.5409e-03 9.8610e-01 weaklyHypermeth 3.5835e-02 1.0000000 weaklyHypermeth 1.2047e-02 0.98683096 weaklyHypermeth 2.9384e-01 1.00000 insignificant 0.0380240 3.0068e-01 insignificant 1.00000000 insignificant 0.700694 0.7802089 -3.7746e-02 16 0.644275 0.7924213 -0.1481464 1.7804e-01 7.1679e-06 weaklyHypometh 1.00000000 1.8379e-04 weaklyHypometh 0.19070479 4.0545e-02 weaklyHypometh 1.00000 4.6073e-01 insignificant -0.08892843 5.2558e-02 insignificant 0.6409506 insignificant chr16 87792935 87793935 140503 CDH15 ENSG00000129910 0.8307509 124 4 0.771373 159 4 0.9117172 177 4 0.9750000 99 3 0.9001916 99 4 0.8268448 200 5 0.847560 159 4 0.7529915 102 5 0.8167888 90 4 0.9363314 150 4 0.830232 182 5 0.677778 59 3 0.838489 161 5 0.783834 153 3 0.643386 203 3 0.9444444 72 3 0.0000000 4 0 0.766335 141 4 0.937769 236 5 0.894226 212 5 0.7465278 60 5 0.765837 71 4 0.756944 82 4 0.9263736 54 5 0.950000 28 3 0.9002551 201 5 0.7197494 181 5 0.7173382 62 5 0.8845485 268 5 0.8567886 250 5 0.8517401 276 5 0.874812 168 5 0.704878 92 4 0.6685714 135 4 0.7052632 217 4 0.900000 6 0 0.7133217 68 5 0.896645 278 5 0.9119727 178 4 0.9250646 138 3 0.9766234 132 3 0.7925758 78 4 0.815054 101 4 0.867680 0.860654 0.9234613 0.961389 0.9418050 0.927123 0.885881 0.9322279 0.8612047 0.949031 0.8714191 0.900741 0.9168955 0.9314090 0.9141129 0.9274951 NA 0.964287 0.957412 0.9138658 0.928519 0.851632 0.947778 0.9246154 0.9888889 0.9348784 0.847790 0.7291277 0.9466323 0.94474797 0.9432638 0.896882 0.8366352 0.8145397 0.7210916 9.7778e-01 0.843781 0.9632407 0.9244255 0.9506632 0.9642809 0.9087037 0.891947 3 0.919482 0.915932 -3.1042e-04 5 0.641410 0.6130675 0.02834280 5.4845e-01 7.8985e-01 insignificant 1.0000000 1.000000 insignificant 6.0397e-01 7.3067e-01 insignificant 1.000000 1.0000000 insignificant -0.03494084 0.5076419 lowCoverage 1 lowCoverage 0.921774 0.845477 0.0637997 5 0.869403 0.802877 0.06652619 1.1960e-02 9.9540e-01 weaklyHypermeth 9.3435e-02 1.0000e+00 weaklyHypermeth 9.2846e-02 9.0824e-01 insignificant 7.5460e-01 1.0000000 insignificant 0.0295221 6.4466e-01 lowCoverage 1.0000e+00 lowCoverage 0.921774 0.9297125 -0.0059781 3 0.869403 0.8727470 -0.0033441 6.9234e-01 0.41539854 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.4578e-01 0.24407488 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0899560 1.3657e-01 lowCoverage 1.0000e+00 lowCoverage 0.917550 0.845477 0.0631211 5 0.8582944 0.802877 0.0554177 6.2251e-02 9.9179e-01 insignificant 4.3230e-01 1.0000e+00 insignificant 9.7240e-02 9.1355e-01 insignificant 7.6367e-01 1.00000 insignificant 0.0644629 2.2346e-01 lowCoverage 1.0000e+00 lowCoverage 0.917550 0.9297125 -0.00518202 3 0.8582944 0.8727470 -1.4453e-02 7.9919e-01 4.3936e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.3642e-01 0.40381089 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0550151 2.2875e-01 lowCoverage 1.00000000 lowCoverage 0.845477 0.9297125 -6.9654e-02 3 0.802877 0.8727470 -0.0698703 9.7642e-01 1.3583e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.93538290 2.8280e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.11947804 5.8369e-02 lowCoverage 0.6866884 lowCoverage chr17 10770 11770 140507 NA 0.8787533 200 5 0.637820 84 6 0.6926057 101 5 0.8991526 224 5 0.7769841 80 5 0.8212436 215 6 0.913949 86 5 0.7736465 91 6 0.7788497 154 6 0.8372638 136 4 0.777184 233 5 0.772059 63 4 0.598810 199 4 0.868132 69 4 0.883147 133 4 0.8666667 48 5 0.7818182 26 2 0.786325 200 4 0.695250 80 5 0.803437 191 6 0.7317104 43 4 0.705385 116 4 0.823433 141 5 0.9250000 52 4 0.750000 45 5 0.7192650 138 5 0.6683700 101 5 0.7656705 80 5 0.7167023 92 4 0.7542501 146 6 0.7142439 191 6 0.882748 250 6 0.493254 129 6 0.5959596 74 4 0.9346154 92 5 0.666566 33 3 0.5368240 154 6 0.504615 207 5 0.8038652 234 5 0.9025296 149 5 0.8027917 137 5 0.8552641 188 4 0.756744 199 5 0.862718 0.803549 0.8174406 0.869060 0.9157706 0.903899 0.880254 0.8799048 0.8102016 0.943504 0.8372705 0.797122 0.7625448 0.8209855 0.8416612 1.0000000 0.8941023 0.858469 0.813347 0.7889725 0.763040 0.870347 0.866832 0.9529570 0.9223417 0.8373231 0.893099 0.8770930 0.8343098 0.79702853 0.8134853 0.914535 0.5270446 0.5926197 0.8918622 6.9844e-01 0.708790 0.6198928 0.9095342 0.9047788 0.8452411 0.8137115 0.827858 4 0.840291 0.845878 -9.3565e-03 4 0.782709 0.7737177 0.00899093 4.2089e-01 5.8577e-01 lowCoverage 1.0000000 1.000000 lowCoverage 2.5178e-01 9.1450e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.02908997 0.3279163 lowCoverage 1 lowCoverage 0.839969 0.650218 0.1856953 5 0.670893 0.539069 0.13182397 7.1501e-08 9.9991e-01 weaklyHypermeth 9.9307e-07 1.0000e+00 weaklyHypermeth 5.5794e-05 1.0000e+00 weaklyHypermeth 1.0940e-03 1.0000000 weaklyHypermeth 0.1701826 5.3504e-02 lowCoverage 5.6919e-01 lowCoverage 0.840352 0.8665932 -0.0162623 5 0.813750 0.7441604 0.0695899 7.4759e-01 0.17950461 insignificant 1.0000e+00 1.000000 insignificant 4.7265e-01 0.49766542 insignificant 1.0000e+00 1.000000 insignificant -0.0320841 3.3364e-01 lowCoverage 1.0000e+00 lowCoverage 0.845878 0.652111 0.1899185 4 0.7737177 0.628914 0.1448037 2.5702e-06 9.9677e-01 lowCoverage 3.4269e-05 1.0000e+00 lowCoverage 1.9701e-04 9.9868e-01 lowCoverage 3.6483e-03 1.00000 lowCoverage 0.1410926 9.4596e-02 lowCoverage 8.7890e-01 lowCoverage 0.845878 0.8675497 -0.00468359 4 0.7737177 0.8681871 -9.4469e-02 7.7152e-01 1.0770e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.0391e-01 0.23067808 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0611740 9.5485e-02 lowCoverage 1.00000000 lowCoverage 0.652111 0.8675497 -2.0116e-01 5 0.628914 0.8681871 -0.2392731 9.9996e-01 9.7003e-05 hypomethylated 1.00000000 1.8654e-03 hypomethylated 0.99999713 9.3865e-04 hypomethylated 1.00000 2.9333e-02 hypomethylated -0.20226663 2.9640e-02 lowCoverage 0.4492420 lowCoverage chr17 43908 44908 140511 NA 0.5972778 250 7 0.565356 107 7 0.4088980 104 5 0.6622508 205 6 0.6755952 106 5 0.5867380 170 7 0.568597 139 5 0.7552361 94 5 0.5277508 86 5 0.6206583 85 5 0.612407 149 5 0.637438 53 2 0.560210 68 5 0.938095 39 4 0.792395 61 5 0.7885714 53 5 0.4230769 26 2 0.598809 372 4 0.542968 179 5 0.621881 244 7 0.6750201 52 4 0.400000 53 2 0.603313 82 6 0.4937500 51 3 0.524650 232 4 0.6009072 137 5 0.5861111 128 5 0.6201299 48 3 0.7209249 102 4 0.5908216 117 7 0.4788572 166 5 0.608583 199 7 0.022105 139 7 0.0162652 135 5 0.1044034 157 7 0.000000 29 4 0.0828596 133 5 0.031761 190 7 0.3489310 208 6 0.3086466 176 7 0.2626652 156 6 0.2295387 90 4 0.314760 177 7 0.855523 0.754140 0.6196372 0.907823 0.8720238 0.795071 0.799207 0.8117196 0.7714681 0.870956 0.8773092 0.817323 0.7512171 0.9298556 0.7425834 0.8171769 0.5916366 0.572286 0.787457 0.8366761 0.854551 0.621975 0.907971 0.6806548 0.7873189 0.8208249 0.787285 0.7489177 0.6915228 0.77367886 0.6580663 0.879849 0.0342227 0.0347712 0.3449675 0.0000e+00 0.197601 0.0652007 0.4983505 0.5250365 0.4368427 0.2595486 0.455910 2 0.745946 0.760615 -1.5580e-02 5 0.610538 0.5012124 0.10932517 9.9433e-01 6.5172e-01 insignificant 1.0000000 1.000000 insignificant 6.3625e-01 9.6673e-01 insignificant 1.000000 1.0000000 insignificant 0.04895483 0.2031459 lowCoverage 1 lowCoverage 0.745946 0.069142 0.6680588 5 0.610538 0.042247 0.56829090 1.3552e-44 7.6878e-01 hypermethylated 1.9360e-42 1.0000e+00 hypermethylated 1.2132e-11 9.4040e-01 hypermethylated 1.3480e-09 1.0000000 hypermethylated 0.5813114 3.3407e-15 hypermethylated 1.1136e-12 hypermethylated 0.745946 0.4064436 0.3171296 4 0.610538 0.2629137 0.3476238 2.4099e-16 0.96539306 lowCoverage 4.8197e-14 1.000000 lowCoverage 1.6409e-08 0.99112133 lowCoverage 3.2817e-06 1.000000 lowCoverage 0.3313020 1.5359e-08 hypermethylated 1.5359e-05 hypermethylated 0.760790 0.069054 0.6860016 5 0.5566332 0.037553 0.5190807 1.1114e-32 9.8130e-01 hypermethylated 1.3893e-30 1.0000e+00 hypermethylated 4.5733e-08 9.9702e-01 hypermethylated 2.2867e-06 1.00000 hypermethylated 0.5323565 7.6917e-12 lowCoverage 3.8458e-09 lowCoverage 0.760615 0.4064436 0.33806224 4 0.5012124 0.2629137 2.3830e-01 2.1281e-13 9.9472e-01 lowCoverage 3.0402e-11 1.0000000 lowCoverage 1.7982e-06 0.99858205 lowCoverage 3.5964e-04 1.00000 lowCoverage 0.2823472 7.2959e-07 lowCoverage 0.00072959 lowCoverage 0.069142 0.4064436 -3.2420e-01 6 0.042247 0.2629137 -0.2206671 9.9967e-01 1.1288e-09 hypomethylated 1.00000000 4.5151e-08 hypomethylated 0.99998520 4.9972e-05 hypomethylated 1.00000 2.4986e-03 hypomethylated -0.25000933 1.3224e-05 hypomethylated 0.0014784 hypomethylated chr17 760600 761600 140517 NXN ENSG00000167693 0.9017223 157 5 0.782498 394 5 0.8620130 79 4 0.8686685 145 4 0.9046939 116 5 0.9242943 311 5 0.939975 185 4 0.9250767 186 5 0.8833775 145 5 0.6670168 56 3 0.843711 242 5 0.855345 45 4 0.826044 147 4 0.863214 70 4 0.907306 111 4 0.8150000 28 5 0.5555556 30 2 0.783515 161 5 0.915000 313 5 0.930505 296 5 0.5574735 42 5 0.718750 12 1 0.869271 168 5 0.5964750 54 4 0.353175 26 1 0.7884822 247 5 0.8980451 61 5 0.7654762 54 3 0.9321023 228 4 0.6771333 283 5 0.9269830 421 5 0.789393 432 5 0.358304 249 5 0.3002463 116 4 0.2211765 332 5 1.000000 6 1 0.3286788 232 5 0.174649 271 5 0.8981362 228 5 0.8227235 149 4 0.8064935 82 5 0.8064815 149 4 0.684664 112 4 0.901335 0.791828 0.8068940 0.856592 0.8905684 0.893186 0.917188 0.9358515 0.8885735 0.932312 0.8694668 0.841084 0.8451867 0.8762517 0.8749456 0.9018692 0.8664499 0.725639 0.921055 0.9159101 0.646232 0.639840 0.872393 0.8840879 0.3538051 0.8071764 0.896599 0.7612928 0.9425579 0.85066448 0.9140360 0.897663 0.1933556 0.2355439 0.1407367 3.0230e-01 0.188751 0.1667579 0.8935450 0.8148563 0.9289153 0.7635514 0.825357 1 0.872473 0.893228 -2.2487e-02 5 0.834497 0.7454576 0.08903926 2.1901e-01 2.9496e-01 insignificant 1.0000000 1.000000 insignificant 1.2862e-01 9.8799e-01 insignificant 1.000000 1.0000000 insignificant 0.10832991 0.0636196 lowCoverage 1 lowCoverage 0.872473 0.132670 0.7144470 5 0.834497 0.433358 0.40113909 2.4103e-43 9.9781e-01 hypermethylated 3.0128e-41 1.0000e+00 hypermethylated 6.4661e-08 9.9934e-01 hypermethylated 2.8914e-06 1.0000000 hypermethylated 0.4505508 1.4259e-02 lowCoverage 1.9532e-01 lowCoverage 0.872937 0.8513889 0.0162527 5 0.891640 0.7139219 0.1777178 4.1748e-01 0.92424343 insignificant 1.0000e+00 1.000000 insignificant 5.6378e-01 0.97767961 insignificant 1.0000e+00 1.000000 insignificant 0.0440269 3.0884e-01 lowCoverage 1.0000e+00 lowCoverage 0.893228 0.132670 0.7436808 5 0.7454576 0.433358 0.3120998 3.9017e-30 9.6889e-01 hypermethylated 3.5470e-28 1.0000e+00 hypermethylated 3.4878e-05 9.8347e-01 hypermethylated 8.7194e-04 1.00000 hypermethylated 0.3422209 3.8824e-02 lowCoverage 4.6219e-01 lowCoverage 0.893954 0.8525730 0.03434908 5 0.7697005 0.8329089 -6.3208e-02 2.3708e-01 3.8757e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5804e-01 0.30312021 insignificant 1.0000e+00 1.00000 insignificant -0.0643030 3.0426e-01 lowCoverage 1.00000000 lowCoverage 0.131950 0.8525730 -7.5126e-01 5 0.338917 0.8329089 -0.4939915 9.9750e-01 2.9761e-17 hypomethylated 1.00000000 3.3068e-15 hypomethylated 0.99999451 3.3573e-05 hypomethylated 1.00000 1.8652e-03 hypomethylated -0.40652395 2.0563e-02 lowCoverage 0.3427216 lowCoverage chr17 795404 796404 140519 NXN ENSG00000167693 0.6598579 280 10 0.546636 191 11 0.4395037 160 10 0.6373668 219 9 0.7262515 80 8 0.6838219 273 10 0.545050 146 10 0.6202328 139 10 0.5872054 105 10 0.6095673 116 8 0.618147 265 10 0.649967 98 6 0.575771 139 10 0.611111 57 5 0.623827 142 10 0.6055556 53 6 0.4934371 63 6 0.694573 234 10 0.642512 240 10 0.719200 225 10 0.6792929 53 6 0.669665 52 6 0.630020 135 8 0.6986061 100 10 0.718081 89 9 0.6411003 202 10 0.6343519 113 8 0.6128571 43 4 0.7271033 120 8 0.6883676 188 10 0.7079121 168 10 0.688240 293 10 0.533364 184 11 0.5132826 160 8 0.6846029 153 10 0.781616 66 6 0.5824734 148 10 0.739624 168 10 0.6708025 287 10 0.7472631 287 10 0.7338609 241 8 0.6958215 211 8 0.728111 238 8 0.756277 0.672095 0.6431247 0.719991 0.8472166 0.776237 0.665255 0.7620827 0.6400911 0.771883 0.7589801 0.778572 0.7051853 0.7556541 0.7633623 0.6458007 0.6116310 0.766743 0.752322 0.8088331 0.856416 0.800109 0.716550 0.8514183 0.8105127 0.7799423 0.722153 0.7336687 0.8829265 0.77068082 0.7838166 0.743209 0.6772364 0.6617677 0.7635194 8.4606e-01 0.742974 0.7401702 0.7966127 0.8357626 0.8024447 0.7866759 0.804305 4 0.683737 0.706298 -2.3579e-02 10 0.635575 0.6793732 -0.04379859 9.9329e-01 2.5360e-01 insignificant 1.0000000 1.000000 insignificant 9.9490e-01 1.4940e-02 weaklyHypometh 1.000000 1.0000000 insignificant -0.06015341 0.0039276 weaklyHypometh 1 insignificant 0.683623 0.671217 0.0159121 10 0.609934 0.647517 -0.03758298 2.4258e-02 6.1802e-01 weaklyHypermeth 1.7969e-01 1.0000e+00 insignificant 2.5187e-01 7.3890e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0246807 6.2767e-01 insignificant 1.0000e+00 insignificant 0.683623 0.7761076 -0.0659349 8 0.609934 0.7047051 -0.0947714 9.9991e-01 0.00364577 weaklyHypometh 1.0000e+00 0.303814 insignificant 9.9999e-01 0.00368553 weaklyHypometh 1.0000e+00 0.409504 insignificant -0.1006921 2.2823e-04 weaklyHypometh 3.0791e-02 weaklyHypometh 0.706109 0.670843 0.0404378 10 0.6526543 0.618143 0.0345114 9.1413e-03 9.9374e-01 weaklyHypermeth 7.1979e-02 1.0000e+00 weaklyHypermeth 2.7665e-02 9.9956e-01 weaklyHypermeth 2.6348e-01 1.00000 insignificant 0.0354727 4.8084e-01 insignificant 1.0000e+00 insignificant 0.706109 0.7759303 -0.03684909 8 0.6526543 0.6800971 -2.7443e-02 9.9852e-01 8.0410e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.7550e-01 0.42803985 insignificant 1.0000e+00 1.00000 insignificant -0.0405386 4.6848e-02 weaklyHypometh 1.00000000 insignificant 0.671217 0.7761076 -7.6660e-02 8 0.647517 0.7047051 -0.0571885 9.9994e-01 5.0872e-03 weaklyHypometh 1.00000000 5.8473e-02 weaklyHypometh 0.99993118 8.9057e-02 insignificant 1.00000 8.9957e-01 insignificant -0.07601135 1.6363e-01 insignificant 1.0000000 insignificant chr17 880012 881012 140524 TIMM22 ENSG00000177370 0.8448037 391 13 0.781527 441 12 0.6988712 418 12 0.9057972 490 13 0.8441165 181 9 0.8500671 677 13 0.716615 220 11 0.7901099 410 12 0.7905701 335 11 0.7923421 389 12 0.846214 549 12 0.821125 177 11 0.819977 493 11 0.847007 318 10 0.801576 335 11 0.6396354 150 9 0.5753535 53 6 0.790839 568 13 0.817366 760 13 0.755294 416 13 0.8265668 176 11 0.828984 280 10 0.819481 308 12 0.7547216 320 11 0.890444 188 11 0.9241132 601 13 0.8137850 356 11 0.6496670 138 11 0.8107382 412 12 0.8147745 640 13 0.8727832 733 13 0.909561 513 13 0.427514 438 12 0.5061599 261 12 0.4010394 466 9 0.848686 266 9 0.6336286 449 14 0.697736 536 13 0.8140011 363 13 0.7040485 330 13 0.7264524 277 13 0.8272940 298 13 0.654277 296 12 0.858056 0.830990 0.8219909 0.902487 0.8517831 0.907683 0.735876 0.8423075 0.8461628 0.871799 0.8979760 0.870173 0.8749702 0.8854887 0.8297326 0.6995931 0.7818217 0.874998 0.886673 0.8638438 0.958950 0.823054 0.861005 0.8493139 0.8861224 0.9129590 0.845890 0.7602449 0.8720987 0.88224889 0.8700779 0.907094 0.5209787 0.5695676 0.5399712 7.9394e-01 0.696876 0.7310711 0.8190274 0.7470796 0.8144006 0.8033081 0.709504 9 0.854789 0.874169 -1.8847e-02 12 0.749187 0.7548611 -0.00567458 9.5272e-01 3.0686e-01 insignificant 1.0000000 1.000000 insignificant 9.8725e-01 3.7798e-01 insignificant 1.000000 1.0000000 insignificant -0.03984129 0.1601080 insignificant 1 insignificant 0.855246 0.588990 0.2533374 13 0.801936 0.548629 0.25330696 8.5705e-31 1.0000e+00 hypermethylated 5.0415e-29 1.0000e+00 hypermethylated 1.0760e-08 1.0000e+00 hypermethylated 5.3802e-07 1.0000000 hypermethylated 0.2006665 3.5153e-02 weaklyHypermeth 4.0762e-01 insignificant 0.857291 0.7314578 0.1001256 13 0.827729 0.7902462 0.0374832 6.6539e-10 0.99990112 weaklyHypermeth 4.7528e-08 1.000000 weaklyHypermeth 9.1840e-05 0.99998966 weaklyHypermeth 4.9594e-03 1.000000 weaklyHypermeth 0.0412458 3.0873e-01 insignificant 1.0000e+00 insignificant 0.874517 0.588990 0.2818486 12 0.7952206 0.548629 0.2465912 1.4509e-21 1.0000e+00 hypermethylated 6.5948e-20 1.0000e+00 hypermethylated 5.3542e-09 1.0000e+00 hypermethylated 3.5695e-07 1.00000 hypermethylated 0.2405078 1.7499e-02 weaklyHypermeth 2.3972e-01 insignificant 0.876051 0.7307692 0.12230181 12 0.8268056 0.7762626 5.0543e-02 4.6663e-09 9.9988e-01 weaklyHypermeth 3.1109e-07 1.0000000 weaklyHypermeth 1.7011e-05 0.99997695 weaklyHypermeth 1.5465e-03 1.00000 weaklyHypermeth 0.0810871 7.4895e-02 insignificant 1.00000000 insignificant 0.591250 0.7305466 -1.7360e-01 13 0.630479 0.7745671 -0.1440886 9.9369e-01 1.2020e-04 weaklyHypometh 1.00000000 2.2679e-03 weaklyHypometh 0.99896008 5.6086e-03 weaklyHypometh 1.00000 1.0197e-01 insignificant -0.15942073 7.9962e-02 insignificant 0.8787070 insignificant chr17 897164 898164 140525 TIMM22 ENSG00000177370 0.8971873 275 14 0.824422 424 14 0.8879010 357 14 0.9168976 292 10 0.8590660 192 12 0.8494992 606 14 0.872637 267 14 0.8748909 380 14 0.8644330 247 14 0.9230601 365 14 0.869750 455 14 0.937012 185 9 0.943177 380 14 0.883392 188 10 0.899276 358 14 0.6023810 81 4 0.8435374 37 5 0.877576 385 9 0.889104 876 14 0.879110 439 14 0.8751220 189 14 0.778559 102 8 0.895376 306 14 0.8770408 166 14 0.574263 73 6 0.9124279 433 14 0.8191217 515 14 0.8568027 171 11 0.8269017 537 14 0.9368566 506 14 0.9054745 696 14 0.815386 540 14 0.749237 360 14 0.7503333 581 14 0.7259601 433 13 0.734127 58 2 0.7042755 246 12 0.890652 499 14 0.8529345 228 11 0.8202417 368 11 0.8337068 214 13 0.6691132 328 11 0.763898 284 14 0.895893 0.876906 0.8098653 0.928723 0.8412122 0.875942 0.859624 0.8602382 0.8413114 0.906673 0.9136321 0.895087 0.8864040 0.8700293 0.8802334 0.8360108 0.7580241 0.724385 0.856771 0.8957445 0.931017 0.604677 0.910462 0.8513162 0.6858093 0.8879307 0.819698 0.9000000 0.7888652 0.90012372 0.8738303 0.935769 0.5737120 0.5830152 0.4762638 5.6722e-01 0.650644 0.7165150 0.7602153 0.6701664 0.7415073 0.6408492 0.757104 2 0.876510 0.884788 -5.1806e-03 14 0.868502 0.8293571 0.03914456 9.0900e-01 3.5686e-03 weaklyHypometh 1.0000000 0.594763 insignificant 8.8049e-01 8.1723e-02 insignificant 1.000000 1.0000000 insignificant 0.03027113 0.3521009 insignificant 1 insignificant 0.876547 0.785090 0.1126183 14 0.868502 0.686286 0.18221587 3.1304e-11 1.7624e-01 weaklyHypermeth 5.5900e-10 1.0000e+00 weaklyHypermeth 1.3182e-03 1.6821e-01 weaklyHypermeth 1.7904e-02 1.0000000 weaklyHypermeth 0.1106181 6.9421e-03 weaklyHypermeth 1.2097e-01 insignificant 0.876547 0.7700422 0.1053025 11 0.868502 0.7223310 0.1461706 1.9553e-05 0.96550836 weaklyHypermeth 6.9831e-04 1.000000 weaklyHypermeth 5.2010e-04 0.74506063 weaklyHypermeth 2.0004e-02 1.000000 weaklyHypermeth 0.0817367 6.8245e-02 insignificant 1.0000e+00 insignificant 0.884424 0.784926 0.1094057 14 0.8541008 0.724347 0.1297534 1.3188e-06 9.3772e-01 weaklyHypermeth 1.9112e-05 1.0000e+00 weaklyHypermeth 8.5636e-02 7.3452e-01 insignificant 7.0194e-01 1.00000 insignificant 0.0803470 5.7199e-02 insignificant 6.1505e-01 insignificant 0.884998 0.7705841 0.10483025 11 0.8846475 0.7704864 1.1416e-01 6.9610e-08 9.9726e-01 weaklyHypermeth 3.8672e-06 1.0000000 weaklyHypermeth 9.1561e-03 0.95807436 weaklyHypermeth 2.2890e-01 1.00000 insignificant 0.0514656 2.6150e-01 insignificant 1.00000000 insignificant 0.785090 0.7700422 -1.4479e-02 11 0.686286 0.7223310 -0.0360452 2.2127e-02 1.6089e-01 inconclusive 1.00000000 1.0000e+00 insignificant 0.17170480 4.2316e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02888145 5.1961e-01 insignificant 1.0000000 insignificant chr17 937486 938486 140526 TIMM22 ENSG00000177370 0.5406028 203 9 0.342715 456 11 0.4109152 435 13 0.5885760 235 12 0.4305491 263 13 0.4532374 546 13 0.418584 415 13 0.4656978 417 13 0.4256729 400 13 0.4924147 342 13 0.533093 438 13 0.437906 259 12 0.411366 357 13 0.725049 122 8 0.447901 335 13 0.4940429 222 10 0.3242387 175 10 0.606668 202 9 0.359502 629 12 0.443018 482 13 0.4175824 126 10 0.306730 232 11 0.463514 314 13 0.4403906 199 9 0.484031 164 9 0.3974317 535 12 0.4157360 271 13 0.4434445 195 12 0.5460980 414 11 0.4161593 578 13 0.4902801 866 13 0.635895 494 13 0.462873 509 13 0.2359482 274 10 0.3021510 360 12 0.471214 87 7 0.3386211 458 12 0.561713 523 13 0.3220391 266 12 0.4702367 313 12 0.4257210 138 10 0.3975253 198 6 0.454254 281 13 0.614670 0.484384 0.4962735 0.623039 0.6057184 0.614060 0.578413 0.5801351 0.5334528 0.619154 0.6245946 0.538010 0.5377855 0.6106418 0.5838947 0.6307749 0.4277926 0.625535 0.526341 0.5710644 0.561957 0.391261 0.531915 0.5714379 0.5911816 0.5621740 0.551526 0.5949833 0.5729319 0.58171814 0.5198996 0.668889 0.5389819 0.2835857 0.2642093 5.7729e-01 0.353559 0.5597954 0.4491172 0.5020693 0.5174171 0.4608647 0.464718 7 0.456264 0.453218 1.4578e-02 13 0.549455 0.4667849 0.08267022 2.3108e-01 9.6272e-01 insignificant 1.0000000 1.000000 insignificant 1.4753e-01 9.8785e-01 insignificant 1.000000 1.0000000 insignificant 0.01281316 0.6901480 insignificant 1 insignificant 0.455884 0.409769 0.0839004 13 0.479629 0.418832 0.06079727 1.7808e-05 2.6264e-02 weaklyHypermeth 1.9787e-04 1.0000e+00 weaklyHypermeth 1.9624e-02 6.4799e-01 weaklyHypermeth 1.9822e-01 1.0000000 insignificant 0.0721675 2.2718e-01 insignificant 1.0000e+00 insignificant 0.456107 0.4197324 0.0840730 10 0.521296 0.4487426 0.0725535 2.9152e-09 0.03318206 weaklyHypermeth 1.7148e-07 1.000000 weaklyHypermeth 3.6928e-05 0.48489392 weaklyHypermeth 2.3080e-03 1.000000 weaklyHypermeth 0.0536323 1.4242e-01 insignificant 1.0000e+00 insignificant 0.453154 0.410140 0.0631886 13 0.4623563 0.446754 0.0156020 9.8588e-03 2.7166e-02 weaklyHypermeth 7.6425e-02 1.0000e+00 weaklyHypermeth 8.9859e-02 3.8609e-01 insignificant 7.3056e-01 1.00000 insignificant 0.0593544 3.1788e-01 insignificant 1.0000e+00 insignificant 0.453196 0.4197324 0.07437829 10 0.4647090 0.4487426 1.5966e-02 2.0386e-02 2.7729e-02 weaklyHypermeth 3.3419e-01 1.0000000 insignificant 2.5471e-02 0.41189121 weaklyHypermeth 5.6603e-01 1.00000 insignificant 0.0408191 2.7137e-01 insignificant 1.00000000 insignificant 0.410140 0.4187605 -4.8866e-02 10 0.446754 0.4119921 0.0347622 1.9578e-01 6.9810e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.29120230 6.6165e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01853526 7.5196e-01 insignificant 1.0000000 insignificant chr17 1564282 1565282 140538 MIR22 ENSG00000199060 0.0712080 387 11 0.058716 446 13 0.0702031 629 14 0.0256864 427 13 0.0070934 384 14 0.0986990 625 13 0.031138 528 14 0.0273902 397 14 0.0169394 538 13 0.0303906 603 13 0.047607 390 14 0.027973 401 13 0.023842 421 13 0.033617 308 7 0.030391 522 13 0.0391158 394 13 0.0130492 224 11 0.076211 465 13 0.021458 470 13 0.028310 547 13 0.0467665 162 12 0.011662 325 13 0.088700 462 13 0.0442308 219 12 0.028409 390 12 0.0576074 596 13 0.0082145 429 13 0.0199390 305 13 0.0344567 291 13 0.0558137 627 13 0.0430975 830 13 0.061986 635 13 0.042654 446 13 0.0188811 305 12 0.0851548 415 10 0.000000 129 10 0.0251943 271 11 0.032546 418 13 0.0190851 474 13 0.0520494 475 13 0.0080970 364 13 0.0412211 403 11 0.018396 482 13 0.063865 0.046324 0.0570816 0.023635 0.0150846 0.109158 0.042211 0.0318712 0.0249898 0.034956 0.0635792 0.021513 0.0147525 0.0493924 0.0307998 0.0272156 0.0149610 0.068661 0.029410 0.0245264 0.073057 0.012418 0.062337 0.0218868 0.0357420 0.0379986 0.016656 0.0172064 0.0447082 0.04471153 0.0300847 0.076115 0.0252301 0.0116905 0.0733024 0.0000e+00 0.036691 0.0213563 0.0267907 0.0328477 0.0124922 0.0207259 0.016156 12 0.042939 0.043825 -8.4183e-04 13 0.041212 0.0427695 -0.00155793 7.8563e-01 8.5094e-01 insignificant 1.0000000 1.000000 insignificant 6.2825e-01 9.6940e-01 insignificant 1.000000 1.0000000 insignificant -0.00278842 0.7468704 insignificant 1 insignificant 0.042939 0.050907 -0.0033537 13 0.041212 0.037599 0.00361302 2.7018e-03 9.1879e-01 inconclusive 2.3910e-02 1.0000e+00 inconclusive 1.5094e-04 9.9988e-01 inconclusive 2.7444e-03 1.0000000 inconclusive 0.0048802 7.1680e-01 insignificant 1.0000e+00 insignificant 0.042943 0.0168335 0.0180242 13 0.044155 0.0257784 0.0183768 8.5718e-02 0.99899818 insignificant 1.0000e+00 1.000000 insignificant 1.4602e-01 0.99821763 insignificant 1.0000e+00 1.000000 insignificant 0.0111822 2.8423e-01 insignificant 1.0000e+00 insignificant 0.043825 0.050907 -0.0027188 13 0.0427695 0.037599 0.0051709 3.8229e-02 9.9036e-01 inconclusive 2.7306e-01 1.0000e+00 insignificant 9.0531e-03 9.9968e-01 inconclusive 1.0059e-01 1.00000 insignificant 0.0076686 5.8549e-01 insignificant 1.0000e+00 insignificant 0.043841 0.0168335 0.01538694 13 0.0458244 0.0257784 2.0046e-02 2.3888e-01 9.9920e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.5000e-01 0.99117770 insignificant 1.0000e+00 1.00000 insignificant 0.0139706 2.1409e-01 insignificant 1.00000000 insignificant 0.050959 0.0168335 4.1908e-03 13 0.040284 0.0257784 0.0145057 8.6763e-01 9.1053e-02 insignificant 1.00000000 7.1696e-01 insignificant 0.99748797 8.7584e-02 insignificant 1.00000 8.9726e-01 insignificant 0.00630196 6.7050e-01 insignificant 1.0000000 insignificant chr17 1586115 1587115 140540 WDR81 ENSG00000167716 0.8826612 140 5 0.733683 58 6 0.8247549 60 6 0.8650182 147 5 0.9194444 37 3 0.7360856 140 6 0.866606 54 3 0.8331401 91 6 0.6075430 103 6 0.8472802 130 6 0.833250 131 6 0.650000 24 2 0.800692 204 6 0.850379 42 4 0.922024 67 5 0.5833333 12 1 0.7666667 21 2 0.703009 143 5 0.677571 143 6 0.826313 108 6 0.7916667 45 5 0.837614 102 6 0.888987 122 6 0.7843915 52 4 0.877138 77 5 0.7406592 106 6 0.8255600 151 6 0.6571429 23 2 0.8556176 61 5 0.7206378 114 6 0.7798577 156 6 0.916783 170 6 0.750000 81 6 0.8108907 89 6 0.8212963 125 5 0.750000 44 3 0.8472222 70 5 0.975512 86 5 0.7844156 56 4 0.8322691 123 5 0.8242443 81 5 0.8438506 78 4 0.707672 114 5 0.877132 0.778307 0.8563061 0.878881 0.9408192 0.747925 0.776014 0.7957373 0.7359113 0.901239 0.8456310 0.681079 0.7299399 0.8361249 0.8666768 0.6047120 0.7627119 0.783839 0.753547 0.8060460 0.888771 0.804246 0.878760 0.7232311 0.8553172 0.7462807 0.807693 0.6070514 0.7802625 0.71613006 0.6937129 0.911431 0.5981638 0.7633867 0.5417608 7.1610e-01 0.834746 0.9707664 0.7244249 0.8781376 0.7923781 0.7742272 0.725302 2 0.810475 0.805768 -1.7664e-03 5 0.808433 0.8276359 -0.01920283 7.5605e-01 3.3332e-01 insignificant 1.0000000 1.000000 insignificant 8.0769e-01 5.4541e-01 insignificant 1.000000 1.0000000 insignificant -0.01986521 0.5303323 lowCoverage 1 lowCoverage 0.810475 0.791919 0.0118348 5 0.808433 0.851430 -0.04299719 3.0544e-01 3.1105e-03 inconclusive 1.0000e+00 5.3254e-01 insignificant 6.5357e-01 1.5033e-02 inconclusive 1.0000e+00 1.0000000 insignificant -0.0393475 3.5645e-01 lowCoverage 1.0000e+00 lowCoverage 0.809704 0.8008850 0.0082641 4 0.740562 0.7105386 0.0300230 4.6805e-01 0.47143386 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.2616e-01 0.73962878 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0120176 7.2540e-01 lowCoverage 1.0000e+00 lowCoverage 0.805768 0.791919 0.0118458 6 0.8276359 0.851430 -0.0237944 6.2610e-01 1.7387e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 6.4766e-01 3.2299e-02 inconclusive 1.0000e+00 1.00000 insignificant -0.0194822 6.4078e-01 insignificant 1.0000e+00 insignificant 0.805768 0.8026608 0.00165917 4 0.8276359 0.8289617 -1.3259e-03 6.2183e-01 5.7230e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 5.9540e-01 0.65446173 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0078476 8.1705e-01 lowCoverage 1.00000000 lowCoverage 0.791919 0.8026608 -5.0716e-04 4 0.851430 0.8289617 0.0224685 9.2539e-02 8.3550e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.12602407 7.3850e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.02732984 5.3265e-01 lowCoverage 1.0000000 lowCoverage chr17 1641012 1642012 140542 SERPINF1 ENSG00000132386 0.6936702 275 8 0.648985 171 7 0.6199016 137 8 0.8421509 178 9 0.5700380 120 9 0.6656973 346 9 0.754931 152 9 0.7837963 155 7 0.6534226 125 7 0.7876854 165 8 0.723686 261 9 0.613964 93 8 0.677862 157 7 0.788571 61 5 0.681668 128 8 0.7151741 110 8 0.7327406 632 8 0.615465 172 6 0.776596 198 8 0.719468 258 8 0.7646932 94 4 0.673531 97 4 0.658513 192 8 0.7446873 157 7 0.768644 82 7 0.6629501 240 8 0.6490197 133 7 0.6403163 125 6 0.7168529 183 7 0.7383329 272 8 0.7435285 288 9 0.774418 280 9 0.688016 140 7 0.6669067 144 8 0.7296750 187 8 0.657522 78 5 0.5842988 209 7 0.695272 281 8 0.7210942 326 8 0.7687434 265 9 0.7602495 262 8 0.8026620 186 8 0.724955 313 9 0.773002 0.777443 0.6121254 0.864300 0.5976054 0.742734 0.750405 0.8144596 0.7186687 0.813892 0.7538770 0.674362 0.7423758 0.7608533 0.7217237 0.7701178 0.7658701 0.730477 0.799565 0.7595318 0.725451 0.692803 0.756889 0.7011020 0.7693495 0.7448632 0.626955 0.6698265 0.7155776 0.78490251 0.7562393 0.766891 0.7454064 0.6530708 0.7559639 6.6613e-01 0.631514 0.7206921 0.7428287 0.7608555 0.7939116 0.8277922 0.743756 7 0.760144 0.741484 1.4824e-02 8 0.682555 0.7107869 -0.02823226 2.6825e-01 4.3601e-01 insignificant 1.0000000 1.000000 insignificant 3.0762e-01 2.2393e-01 insignificant 1.000000 1.0000000 insignificant -0.00801696 0.7155892 insignificant 1 insignificant 0.760144 0.697786 0.0573519 8 0.682555 0.633851 0.04870362 4.9993e-03 9.6985e-01 weaklyHypermeth 4.1660e-02 1.0000e+00 weaklyHypermeth 4.0132e-02 9.6204e-01 weaklyHypermeth 3.4597e-01 1.0000000 insignificant 0.0329918 2.2290e-01 insignificant 1.0000e+00 insignificant 0.760144 0.7840237 -0.0190519 8 0.682555 0.7766681 -0.0941135 9.6466e-01 0.10423547 insignificant 1.0000e+00 1.000000 insignificant 9.3039e-01 0.08387891 insignificant 1.0000e+00 1.000000 insignificant -0.0522672 3.2167e-02 weaklyHypometh 6.9928e-01 insignificant 0.741484 0.697786 0.0400792 8 0.7107869 0.633851 0.0769359 8.5159e-03 9.5212e-01 weaklyHypermeth 6.7587e-02 1.0000e+00 weaklyHypermeth 2.8897e-02 9.8393e-01 weaklyHypermeth 2.7007e-01 1.00000 insignificant 0.0410088 1.2845e-01 insignificant 1.0000e+00 insignificant 0.741484 0.7840237 -0.02981467 8 0.7107869 0.7766681 -6.5881e-02 9.2549e-01 9.0005e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.2498e-01 0.16162525 insignificant 1.0000e+00 1.00000 insignificant -0.0442502 5.8339e-02 insignificant 1.00000000 insignificant 0.697786 0.7840237 -7.1659e-02 8 0.633851 0.7766681 -0.1428171 9.9061e-01 2.5637e-03 weaklyHypometh 1.00000000 3.3295e-02 weaklyHypometh 0.97376707 1.8810e-02 weaklyHypometh 1.00000 2.5272e-01 insignificant -0.08525905 8.1702e-03 weaklyHypometh 0.1571193 insignificant chr17 1753955 1754955 140548 ENSG00000212735 0.6347619 46 5 0.573333 48 3 0.7777778 18 3 0.7107143 24 3 0.9333333 9 0 0.6806692 117 4 0.500000 4 0 0.7825397 30 3 0.9166667 13 1 0.9714286 22 3 0.740293 86 4 1.000000 6 0 0.955556 44 3 NA 0 0 0.888889 27 3 NA 0 0 0.9577778 30 3 0.671678 42 3 0.834106 69 3 0.647451 130 5 0.7083333 29 3 0.735000 30 3 0.713810 46 5 0.6603175 28 3 0.166667 6 0 0.8333333 37 5 0.7492063 26 3 0.5000000 6 0 0.6857143 23 2 0.8777778 54 4 0.8264103 78 5 0.714286 132 5 0.757143 43 5 0.7228070 58 3 0.6666667 18 3 0.833333 6 0 0.6666667 10 0 0.552932 60 5 0.7733333 17 2 0.7742857 32 3 0.8161905 30 3 0.7666667 11 0 0.758730 28 3 0.616071 0.723810 0.8229167 0.453125 0.7916667 0.426943 0.055580 0.7827381 0.8437500 0.991071 0.7822699 1.000000 0.9750000 NA 0.8888889 NA 0.9243056 0.471154 0.856582 0.4877820 0.783854 0.562500 0.669271 0.6438492 0.3616252 0.6875000 0.875992 0.3750000 0.6428571 0.82638889 0.7377404 0.444444 0.5982143 0.9462719 0.3363095 9.6875e-01 0.583333 0.6401159 0.5000000 0.5625000 0.7589286 0.5833333 0.513889 0 0.713725 0.715152 -1.1771e-02 5 0.729465 0.7550318 -0.02556656 8.9122e-01 7.6461e-03 weaklyHypometh 1.0000000 0.924732 insignificant 2.6485e-01 1.8329e-01 insignificant 1.000000 1.0000000 insignificant 0.10670522 0.1169393 lowCoverage 1 lowCoverage 0.713725 0.723077 -0.0014651 3 0.729465 0.724004 0.00546121 1.6079e-01 6.4967e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.4470e-01 9.2261e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0876850 1.1916e-01 lowCoverage 1.0000e+00 lowCoverage 0.713725 0.7118644 -0.0146945 1 0.729465 0.7724968 -0.0430316 9.2668e-01 0.01492376 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.5934e-01 0.11535584 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0097685 7.9523e-01 lowCoverage 1.0000e+00 lowCoverage 0.715152 0.723077 0.0133492 3 0.7550318 0.724004 0.0310278 7.7601e-03 6.9709e-01 lowCoverage 6.2081e-02 1.0000e+00 lowCoverage 2.8973e-01 7.0763e-01 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0190203 7.7990e-01 lowCoverage 1.0000e+00 lowCoverage 0.715152 0.7118644 -0.00830002 1 0.7550318 0.7724968 -1.7465e-02 6.5666e-01 4.4244e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.8389e-01 0.20887863 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0969367 1.0603e-01 lowCoverage 1.00000000 lowCoverage 0.723077 0.7118644 7.1448e-05 1 0.724004 0.7724968 -0.0484928 7.9711e-01 6.7832e-02 lowCoverage 1.00000000 5.6059e-01 lowCoverage 0.73852348 2.4373e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.07791646 1.0347e-01 lowCoverage 1.0000000 lowCoverage chr17 1755349 1756349 140550 ENSG00000212735 0.6163019 504 11 0.514602 501 11 0.6722930 318 12 0.6261015 561 12 0.6168651 239 11 0.7768048 571 12 0.705050 291 12 0.6761699 370 13 0.6159484 489 12 0.4991885 488 9 0.530796 383 12 0.792608 262 9 0.255195 640 12 0.659987 309 12 0.430431 476 8 0.6167800 173 5 0.7168771 99 8 0.517958 717 12 0.699145 385 11 0.515714 604 12 0.6969309 173 8 0.206312 414 9 0.613459 347 11 0.5031971 203 13 0.762571 175 11 0.6546360 481 12 0.7052287 278 12 0.5528106 242 9 0.6158612 328 11 0.3387515 588 12 0.5737107 684 12 0.819103 502 12 0.209785 410 12 0.3505048 201 11 0.2011551 326 11 0.142602 86 5 0.1488571 501 12 0.378522 428 12 0.2803725 639 11 0.3029439 621 11 0.3400859 573 11 0.3983060 407 9 0.341890 484 12 0.535034 0.552493 0.7394540 0.601043 0.5319386 0.780605 0.708749 0.6664348 0.6449984 0.610688 0.6606074 0.825791 0.1740950 0.6337005 0.4599266 0.7863108 0.7753906 0.405282 0.816085 0.4075436 0.790894 0.104553 0.638745 0.7385249 0.7414481 0.8293536 0.686164 0.7284076 0.5746450 0.33850703 0.5675652 0.871714 0.0940386 0.3034649 0.1287884 7.9070e-02 0.117016 0.2576323 0.1404523 0.1602857 0.1634871 0.3211796 0.235899 8 0.579356 0.589168 -8.7996e-03 12 0.556611 0.5169200 0.03969067 3.4194e-01 7.2009e-01 insignificant 1.0000000 1.000000 insignificant 4.4184e-01 3.6183e-01 insignificant 1.000000 1.0000000 insignificant 0.01585990 0.7859533 insignificant 1 insignificant 0.579501 0.197024 0.3817172 11 0.588481 0.249448 0.33903251 1.8234e-26 1.0000e+00 hypermethylated 7.9279e-25 1.0000e+00 hypermethylated 1.0913e-16 1.0000e+00 hypermethylated 3.6376e-14 1.0000000 hypermethylated 0.3641697 2.5415e-05 hypermethylated 1.1050e-03 hypermethylated 0.579935 0.2121880 0.3622176 11 0.616151 0.3756598 0.2404915 2.4241e-20 0.99999003 hypermethylated 1.2120e-17 1.000000 hypermethylated 1.8663e-16 0.99999751 hypermethylated 1.8663e-13 1.000000 hypermethylated 0.2700212 2.1083e-07 hypermethylated 1.0542e-04 hypermethylated 0.589464 0.197234 0.3904154 11 0.5039711 0.254109 0.2498625 1.2105e-18 1.0000e+00 hypermethylated 4.8420e-17 1.0000e+00 hypermethylated 8.5225e-14 1.0000e+00 hypermethylated 2.1306e-11 1.00000 hypermethylated 0.3483098 7.4096e-05 hypermethylated 2.9638e-03 hypermethylated 0.589545 0.2121880 0.36159243 11 0.5480987 0.3756598 1.7244e-01 3.0237e-13 9.9133e-01 hypermethylated 3.7796e-11 1.0000000 hypermethylated 3.6806e-12 0.99915880 hypermethylated 1.8403e-09 1.00000 hypermethylated 0.2541613 3.4817e-04 hypermethylated 0.03868544 hypermethylated 0.197531 0.2123439 -2.5627e-02 11 0.302902 0.4024927 -0.0995911 9.9432e-01 3.2534e-03 weaklyHypometh 1.00000000 4.1110e-02 weaklyHypometh 0.99997155 5.5374e-04 weaklyHypometh 1.00000 1.9094e-02 weaklyHypometh -0.09414855 7.9608e-02 insignificant 0.8787070 insignificant chr17 1758624 1759624 140551 ENSG00000212735 0.1544056 622 13 0.028334 984 13 0.0477704 632 13 0.2527143 456 13 0.1406250 529 11 0.1922529 1125 13 0.039633 854 13 0.1008129 655 13 0.0885005 712 13 0.0139680 514 13 0.153540 787 13 0.147081 490 13 0.095238 498 15 0.240224 380 8 0.050038 781 14 0.0078537 464 13 0.1061017 256 7 0.024641 561 13 0.138445 1204 12 0.139609 1101 13 0.1469279 251 14 0.144017 206 11 0.092742 515 13 0.0742754 279 11 0.140000 219 11 0.2814466 957 13 0.1145973 509 11 0.2175070 182 9 0.1636764 822 13 0.2069886 1071 14 0.0023102 1692 13 0.220930 892 13 0.011102 572 10 0.1914913 590 13 0.2358289 857 13 0.000000 121 9 0.0717402 569 9 0.183812 936 13 0.0533428 890 13 0.0074514 878 13 0.0719577 431 13 0.0053994 819 13 0.215597 659 13 0.019631 0.019837 0.0391004 0.011262 0.0051282 0.029474 0.009302 0.0031671 0.0089879 0.016179 0.0277091 0.011195 0.0000000 0.0112680 0.0036253 0.0045872 0.1557614 0.027721 0.010621 0.0032386 0.062764 0.007442 0.026745 0.0062505 0.0011282 0.0042927 0.015279 0.0083028 0.0076695 0.00581600 0.0017433 0.033872 0.0088206 0.0080154 0.0011841 9.9701e-04 0.011237 0.0044165 0.0129712 0.0038116 0.0120049 0.0037475 0.012158 10 0.021101 0.019099 3.0012e-03 13 0.126859 0.1939290 -0.06706968 7.3010e-01 8.7979e-01 insignificant 1.0000000 1.000000 insignificant 7.8432e-01 7.1505e-01 insignificant 1.000000 1.0000000 insignificant -0.04236212 0.1317338 insignificant 1 insignificant 0.021104 0.012620 0.0069554 13 0.133202 0.207647 -0.07444514 5.6359e-02 8.2224e-01 insignificant 3.8868e-01 1.0000e+00 insignificant 3.7135e-02 9.3581e-01 weaklyHypermeth 3.3129e-01 1.0000000 insignificant -0.0075730 8.6937e-01 insignificant 1.0000e+00 insignificant 0.021043 0.0114224 0.0073474 13 0.134365 0.1430052 -0.0086402 1.5158e-01 0.99648571 insignificant 1.0000e+00 1.000000 insignificant 3.8138e-01 0.99606652 insignificant 1.0000e+00 1.000000 insignificant 0.0373398 4.0794e-01 insignificant 1.0000e+00 insignificant 0.018970 0.012620 0.0037041 13 0.1536254 0.207647 -0.0540220 2.9704e-01 9.6204e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8137e-01 9.6490e-01 insignificant 1.0000e+00 1.00000 insignificant 0.0347891 4.7743e-01 insignificant 1.0000e+00 insignificant 0.018731 0.0114255 0.00363465 13 0.1548219 0.1509499 3.8720e-03 3.1652e-01 9.5528e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.8561e-01 0.94754257 insignificant 1.0000e+00 1.00000 insignificant 0.0797019 1.1595e-01 insignificant 1.00000000 insignificant 0.011810 0.0114255 -1.5611e-03 13 0.147386 0.1509499 -0.0035639 6.6206e-01 4.9832e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.93903281 6.3093e-01 insignificant 1.00000 1.0000e+00 insignificant 0.04491284 4.4635e-01 insignificant 1.0000000 insignificant chr17 1808148 1809148 140553 RTN4RL1 ENSG00000185924 0.7581892 376 9 0.687509 380 11 0.6237852 177 12 0.7621709 356 6 0.8585061 141 10 0.8694638 447 10 0.802262 182 10 0.8781307 166 9 0.8433579 134 9 0.8566900 128 9 0.884459 544 15 0.812778 53 5 0.701389 242 14 0.626225 34 2 0.785480 174 11 0.9555556 43 4 0.8317492 1187 7 0.648500 319 6 0.833868 560 12 0.745459 400 7 0.9073947 96 9 0.639909 63 4 0.618676 231 11 0.8093540 101 9 0.877571 154 4 0.9147592 486 12 0.7444178 133 6 0.9500000 40 2 0.8490001 262 9 0.9222783 498 14 0.7777090 645 14 0.928563 466 11 0.509458 348 14 0.7211388 308 12 0.6407298 361 8 0.540645 73 6 0.6024423 173 10 0.458176 504 13 0.4752893 318 13 0.3744644 326 13 0.5740582 428 10 0.5008567 291 11 0.577474 322 11 0.846369 0.759553 0.7509251 0.863191 0.9438397 0.880759 0.788807 0.9216478 0.7656426 0.836371 0.8917076 0.815291 0.8733130 NA 0.8814802 0.8997773 0.7875244 0.744715 0.902430 0.8965544 0.921853 0.691578 0.779472 0.8688650 0.8440772 0.8895524 0.754877 0.9109103 0.8853415 0.91743601 0.8629336 0.917431 0.6204320 0.7442476 0.6720242 5.8782e-01 0.726169 0.5739211 0.6305927 0.6136305 0.7646707 0.7032898 0.765291 2 0.838325 0.870470 -4.4453e-02 10 0.766178 0.8307359 -0.06455738 9.9349e-01 3.2262e-02 weaklyHypometh 1.0000000 1.000000 insignificant 9.9945e-01 2.1530e-01 insignificant 1.000000 1.0000000 insignificant -0.04002634 0.3118877 insignificant 1 insignificant 0.839437 0.628749 0.1830702 10 0.808744 0.512752 0.29599181 5.2344e-25 1.0000e+00 weaklyHypermeth 2.0938e-23 1.0000e+00 weaklyHypermeth 4.5830e-09 1.0000e+00 weaklyHypermeth 2.6959e-07 1.0000000 weaklyHypermeth 0.2095114 1.4123e-03 weaklyHypermeth 3.6214e-02 weaklyHypermeth 0.838013 0.6729970 0.1190783 10 0.736226 0.4731928 0.2630330 1.4209e-25 1.00000000 weaklyHypermeth 1.4209e-22 1.000000 weaklyHypermeth 2.5043e-12 1.00000000 weaklyHypermeth 1.2522e-09 1.000000 weaklyHypermeth 0.2878478 3.2035e-04 hypermethylated 3.2840e-02 hypermethylated 0.872119 0.628749 0.2390967 10 0.8768879 0.512752 0.3641357 9.1780e-23 1.0000e+00 hypermethylated 5.3988e-21 1.0000e+00 hypermethylated 1.1794e-08 1.0000e+00 hypermethylated 7.2085e-07 1.00000 hypermethylated 0.2495378 3.7216e-04 hypermethylated 1.1752e-02 hypermethylated 0.870347 0.6729970 0.18336849 9 0.7989989 0.4731928 3.2581e-01 3.0273e-28 1.0000e+00 weaklyHypermeth 3.0273e-25 1.0000000 weaklyHypermeth 1.1774e-12 1.00000000 weaklyHypermeth 1.1774e-09 1.00000 weaklyHypermeth 0.3278741 5.2845e-05 hypermethylated 0.01321123 hypermethylated 0.629252 0.6733967 -6.6826e-02 9 0.548636 0.5047390 0.0438969 1.3334e-01 4.3424e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.13299573 6.7849e-01 insignificant 1.00000 1.0000e+00 insignificant 0.07833637 1.8046e-01 insignificant 1.0000000 insignificant chr17 1812915 1813915 140554 RTN4RL1 ENSG00000185924 0.9074807 530 10 0.782679 447 10 0.8116173 396 10 0.9093787 416 10 0.7981884 313 10 0.8724481 589 10 0.840300 305 7 0.7010038 211 8 0.8290088 420 10 0.8508531 500 10 0.828783 411 10 0.814244 304 10 0.883771 497 10 0.901898 161 7 0.873094 391 10 0.8055242 244 10 0.7474522 241 10 0.887510 647 10 0.881855 382 10 0.901150 461 10 0.8477852 236 10 0.801070 267 10 0.863683 324 10 0.8926106 287 10 0.860297 159 7 0.7520671 299 7 0.6850443 232 7 0.7246125 218 7 0.8390827 251 7 0.9100488 404 10 0.8851768 486 10 0.899095 657 10 0.770389 401 10 0.7686254 273 10 0.7908233 278 7 0.717938 102 7 0.8180642 435 10 0.882820 371 10 0.8803760 511 10 0.9170933 493 10 0.9008596 471 10 0.9000526 504 10 0.925116 610 10 0.857745 0.737591 0.7236619 0.848289 0.7480335 0.817140 0.785210 0.7314136 0.7873967 0.806611 0.7967127 0.757101 0.8639930 0.8193900 0.8421575 0.7312394 0.6540678 0.821121 0.832562 0.8660810 0.797905 0.741456 0.848134 0.8578469 0.8410876 0.8255166 0.765047 0.7893307 0.8192246 0.87062908 0.8468122 0.856376 0.7179856 0.6737204 0.7685229 6.9383e-01 0.724861 0.8180859 0.8413246 0.8712088 0.8638087 0.8808631 0.877570 7 0.818841 0.851571 -2.9380e-02 10 0.844016 0.8695584 -0.02554210 5.0515e-01 5.3696e-02 insignificant 1.0000000 1.000000 insignificant 4.3999e-01 3.9012e-01 insignificant 1.000000 1.0000000 insignificant 0.01136421 0.6512332 insignificant 1 insignificant 0.818841 0.769355 0.0462490 10 0.844016 0.803758 0.04025813 4.0582e-05 9.8322e-01 weaklyHypermeth 4.3172e-04 1.0000e+00 weaklyHypermeth 2.0164e-02 9.4291e-01 weaklyHypermeth 1.9840e-01 1.0000000 insignificant 0.0499685 8.8861e-02 insignificant 8.4629e-01 insignificant 0.818841 0.8856701 -0.0571437 10 0.844016 0.9045173 -0.0605011 9.0441e-01 0.00241194 weaklyHypometh 1.0000e+00 0.258929 insignificant 7.4039e-01 0.00535272 weaklyHypometh 1.0000e+00 0.535272 insignificant -0.0632876 3.2840e-04 weaklyHypometh 3.2840e-02 weaklyHypometh 0.851571 0.769355 0.0798563 10 0.8695584 0.803758 0.0658002 1.5674e-06 9.9925e-01 weaklyHypermeth 2.2392e-05 1.0000e+00 weaklyHypermeth 1.3450e-03 9.4394e-01 weaklyHypermeth 1.9493e-02 1.00000 weaklyHypermeth 0.0386043 2.3603e-01 insignificant 1.0000e+00 insignificant 0.851571 0.8856701 -0.03302699 10 0.8695584 0.9045173 -3.4959e-02 9.3519e-01 1.0344e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.4099e-01 0.00076818 weaklyHypometh 1.0000e+00 0.22705 insignificant -0.0746518 5.5089e-03 weaklyHypometh 0.34381268 insignificant 0.769355 0.8856701 -1.1183e-01 10 0.803758 0.9045173 -0.1007592 9.9970e-01 7.3669e-07 weaklyHypometh 1.00000000 2.1048e-05 weaklyHypometh 0.99726668 5.7414e-04 weaklyHypometh 1.00000 1.9138e-02 weaklyHypometh -0.11325604 3.0573e-03 weaklyHypometh 0.0914425 weaklyHypometh chr17 1921166 1922166 140571 HIC1 ENSG00000177374 0.7953786 406 15 0.752560 463 16 0.8236337 369 17 0.8762473 457 16 0.8368932 246 13 0.9092540 853 16 0.732543 235 13 0.9195097 457 17 0.8651493 286 15 0.9144861 422 16 0.875003 681 18 0.843683 191 8 0.830738 595 17 0.910371 336 15 0.888475 388 15 0.8235659 161 6 0.3663433 1596 6 0.729113 595 15 0.849570 1243 15 0.887939 680 18 0.8261000 252 16 0.867608 224 10 0.807399 291 16 0.8799123 222 15 0.914245 139 10 0.8520538 551 18 0.7756597 452 14 0.7952409 128 8 0.8685885 750 15 0.8714423 515 18 0.9025267 834 17 0.920529 541 18 0.528083 557 16 0.8695264 524 15 0.7942857 110 5 0.613004 120 7 0.7670880 308 15 0.661923 774 16 0.9350671 291 14 0.8281463 534 14 0.9681193 260 11 0.9304368 236 13 0.924515 272 13 0.861226 0.664324 0.8502973 0.917882 0.8165977 0.900802 0.881760 0.8631338 0.8867602 0.928332 0.8555928 0.910437 0.8771310 0.8775570 0.8713150 0.7589454 0.5091289 0.655250 0.918299 0.9047680 0.894216 0.889213 0.777508 0.8240922 0.8679812 0.8358023 0.740313 0.8145982 0.8572942 0.83121816 0.8774118 0.925358 0.5160212 0.7409240 0.7004357 7.0230e-01 0.808462 0.5378891 0.9119726 0.9092045 0.9411507 0.8797763 0.903061 7 0.805498 0.888095 -7.2031e-02 16 0.745642 0.8642187 -0.11857689 9.3691e-01 6.7375e-03 weaklyHypometh 1.0000000 0.924732 insignificant 7.7919e-01 3.4270e-02 weaklyHypometh 1.000000 1.0000000 insignificant -0.03525258 0.2562923 insignificant 1 insignificant 0.805595 0.702217 0.1046821 16 0.782706 0.626048 0.15665819 5.0930e-26 9.9979e-01 weaklyHypermeth 2.1221e-24 1.0000e+00 weaklyHypermeth 3.8123e-06 9.9993e-01 weaklyHypermeth 1.0032e-04 1.0000000 weaklyHypermeth 0.1158712 8.3112e-02 insignificant 8.3112e-01 insignificant 0.805595 0.9284369 -0.1208573 14 0.782706 0.8676579 -0.0849519 9.9992e-01 0.00102157 weaklyHypometh 1.0000e+00 0.145939 insignificant 1.0000e+00 0.00023267 weaklyHypometh 1.0000e+00 0.050573 weaklyHypometh -0.0957341 1.7139e-02 weaklyHypometh 4.3946e-01 insignificant 0.888206 0.702341 0.2008304 16 0.8231209 0.643855 0.1792658 1.0222e-22 1.0000e+00 hypermethylated 5.6787e-21 1.0000e+00 hypermethylated 3.1801e-06 1.0000e+00 hypermethylated 1.0258e-04 1.00000 hypermethylated 0.1511238 3.2032e-02 weaklyHypermeth 4.0040e-01 insignificant 0.888388 0.9284369 -0.03996624 14 0.8642769 0.8676579 -3.3809e-03 9.9808e-01 9.9098e-04 weaklyHypometh 1.0000e+00 0.1981960 insignificant 9.9993e-01 0.00278779 weaklyHypometh 1.0000e+00 0.55756 insignificant -0.0604815 6.2176e-02 insignificant 1.00000000 insignificant 0.702217 0.9284369 -2.3854e-01 14 0.626048 0.8676579 -0.2416101 1.0000e+00 7.7134e-14 hypomethylated 1.00000000 5.9334e-12 hypomethylated 1.00000000 1.2201e-07 hypomethylated 1.00000 1.1092e-05 hypomethylated -0.21160534 7.6450e-03 weaklyHypometh 0.1499016 insignificant chr17 1925145 1926145 140575 HIC1 ENSG00000177374 0.8008407 113 5 0.757331 192 5 0.6380764 104 5 0.8778431 79 5 0.9121111 90 5 0.8206484 263 5 0.861967 120 5 0.8154298 128 5 0.8194258 81 5 0.8685897 169 5 0.794542 307 5 0.876190 31 5 0.829241 168 5 0.859522 89 5 0.802680 177 5 0.5000000 21 3 NA 0 0 0.593268 216 5 0.827872 565 5 0.844433 246 5 0.6961950 74 5 0.500000 4 0 0.830037 119 5 0.7302729 108 5 0.700000 16 0 0.8295725 373 5 0.7809724 191 5 1.0000000 29 3 0.7380543 419 5 0.7230541 380 5 0.8878898 657 5 0.810572 238 5 0.117463 256 5 0.2716501 352 5 0.3384848 169 5 NA 0 0 0.1884444 123 5 0.246253 384 5 0.5319701 194 5 0.4916359 144 5 0.5684698 65 3 0.3267286 122 5 0.606410 103 5 0.782300 0.752410 0.6622293 0.862098 0.8997379 0.805026 0.882797 0.7908393 0.7900966 0.859881 0.7719616 0.884996 0.8088785 0.8329984 0.7912355 0.3301887 NA 0.569183 0.814624 0.8386898 0.749593 0.729658 0.769203 0.6639421 0.5943396 0.8900894 0.746192 1.0000000 0.8658166 0.86671088 0.8830269 0.800805 0.0983010 0.1779201 0.2903087 NA 0.121342 0.1575976 0.5905713 0.4181115 0.6141730 0.3861402 0.640179 3 0.789174 0.842287 -5.2285e-02 5 0.751760 0.7509444 0.00081588 9.6814e-01 1.9036e-02 weaklyHypometh 1.0000000 1.000000 insignificant 9.1550e-01 2.6283e-01 insignificant 1.000000 1.0000000 insignificant 0.02585246 0.5520453 lowCoverage 1 lowCoverage 0.789357 0.190031 0.6069312 5 0.802112 0.234351 0.56776155 4.6716e-38 1.0000e+00 hypermethylated 5.1907e-36 1.0000e+00 hypermethylated 1.3254e-09 9.9999e-01 hypermethylated 8.2836e-08 1.0000000 hypermethylated 0.5622784 1.9620e-06 lowCoverage 1.3080e-04 lowCoverage 0.789174 0.5318471 0.2525324 5 0.751760 0.4681767 0.2835835 1.6244e-12 1.00000000 hypermethylated 2.3205e-10 1.000000 hypermethylated 1.0918e-07 0.99999929 hypermethylated 1.8197e-05 1.000000 hypermethylated 0.2896945 1.6064e-03 lowCoverage 7.3017e-02 lowCoverage 0.843198 0.190031 0.6533241 5 0.8511333 0.234351 0.6167825 4.7721e-33 1.0000e+00 hypermethylated 7.9535e-31 1.0000e+00 hypermethylated 4.1271e-09 1.0000e+00 hypermethylated 2.9479e-07 1.00000 hypermethylated 0.5364259 4.7001e-07 lowCoverage 5.8752e-05 lowCoverage 0.842287 0.5318471 0.30539011 5 0.7509444 0.4681767 2.8277e-01 4.0747e-14 1.0000e+00 hypermethylated 8.1494e-12 1.0000000 hypermethylated 7.3716e-06 0.99999723 hypermethylated 7.3716e-04 1.00000 hypermethylated 0.2638421 1.9782e-03 lowCoverage 0.15217268 lowCoverage 0.190031 0.5335463 -3.6022e-01 5 0.234351 0.5618121 -0.3274613 9.9939e-01 7.7205e-11 hypomethylated 1.00000000 3.3567e-09 hypomethylated 0.99920891 6.0100e-06 hypomethylated 1.00000 4.2929e-04 hypomethylated -0.27258387 2.4954e-03 lowCoverage 0.0804952 lowCoverage chr17 1925830 1926830 140576 HIC1 ENSG00000177374 0.8503863 186 7 0.738442 251 8 0.7045337 158 8 0.8610334 169 7 0.8909028 113 7 0.8810891 404 8 0.882479 133 6 0.8218955 219 8 0.8115856 140 8 0.8727564 229 8 0.845273 400 8 0.831349 48 7 0.873067 224 8 0.845534 122 7 0.799790 252 7 0.6250000 41 5 0.7500000 4 0 0.581791 300 7 0.834996 695 7 0.883223 342 8 0.7922647 95 8 0.544242 52 3 0.881355 187 8 0.7094109 146 8 0.784722 35 2 0.8586682 447 7 0.7664795 232 8 0.9442130 103 6 0.7037297 483 7 0.7491904 449 8 0.8867906 770 8 0.845938 347 8 0.119226 315 8 0.2665466 375 7 0.2115530 189 7 0.000000 5 0 0.2409729 204 8 0.172484 482 8 0.5263969 230 7 0.5002368 190 7 0.6124995 108 5 0.3663398 165 7 0.614103 152 7 0.835373 0.794935 0.7460705 0.865293 0.9195331 0.869802 0.874077 0.8424980 0.8450545 0.893378 0.8714252 0.772543 0.8553163 0.8608040 0.8009854 0.6223404 0.7536109 0.559207 0.868052 0.8741192 0.824618 0.638289 0.832813 0.7552014 0.7228132 0.8831905 0.794203 0.9735705 0.9030346 0.83460551 0.8586925 0.859158 0.0947868 0.2179424 0.1636847 9.5340e-02 0.228138 0.1225388 0.6679316 0.4651609 0.6703196 0.4202364 0.635775 5 0.812415 0.845694 -3.4889e-02 8 0.822597 0.7976092 0.02498737 9.6386e-01 1.2365e-01 insignificant 1.0000000 1.000000 insignificant 8.7766e-01 6.4177e-01 insignificant 1.000000 1.0000000 insignificant 0.02033931 0.5838451 insignificant 1 insignificant 0.812472 0.185987 0.6291916 7 0.838729 0.189460 0.64926902 4.4171e-60 1.0000e+00 hypermethylated 1.4724e-57 1.0000e+00 hypermethylated 4.0287e-16 1.0000e+00 hypermethylated 1.0072e-13 1.0000000 hypermethylated 0.6407927 8.7538e-07 hypermethylated 8.5202e-05 hypermethylated 0.812288 0.5538462 0.2556199 7 0.783174 0.4500252 0.3331484 9.5584e-20 1.00000000 hypermethylated 2.3896e-17 1.000000 hypermethylated 9.5340e-11 1.00000000 hypermethylated 2.3835e-08 1.000000 hypermethylated 0.2853413 1.5391e-03 weaklyHypermeth 7.3017e-02 weaklyHypermeth 0.846361 0.185987 0.6603358 7 0.8359668 0.189460 0.6465067 2.0415e-50 1.0000e+00 hypermethylated 5.1037e-48 1.0000e+00 hypermethylated 2.7766e-14 1.0000e+00 hypermethylated 9.2552e-12 1.00000 hypermethylated 0.6204534 8.7991e-08 hypermethylated 1.7598e-05 hypermethylated 0.845923 0.5538462 0.29009630 7 0.7843795 0.4500252 3.3435e-01 7.8333e-20 1.0000e+00 hypermethylated 3.9166e-17 1.0000000 hypermethylated 1.2305e-08 1.00000000 hypermethylated 3.0763e-06 1.00000 hypermethylated 0.2650020 1.3564e-03 weaklyHypermeth 0.12330877 insignificant 0.186106 0.5551601 -3.8390e-01 7 0.213143 0.5062784 -0.2931357 9.9084e-01 2.3929e-14 hypomethylated 1.00000000 2.1572e-12 hypomethylated 0.99958985 7.1560e-08 hypomethylated 1.00000 1.0332e-05 hypomethylated -0.35545140 2.9437e-04 hypomethylated 0.0154932 hypomethylated chr17 2005438 2006438 140602 SMG6 ENSG00000070366 0.7058673 73 5 0.727565 123 6 0.5180684 121 6 0.5120435 83 4 0.7773924 126 6 0.7620943 169 6 0.663095 133 6 0.7915550 144 6 0.7154040 94 3 0.7251094 105 6 0.671324 232 6 0.628346 86 6 0.824891 129 6 0.571581 51 4 0.726024 156 6 0.5387205 55 3 0.7684504 62 3 0.696803 91 4 0.781873 260 6 0.725033 114 6 0.8123583 50 6 0.546703 35 4 0.814815 57 3 0.6656450 93 6 0.737374 44 4 0.8549264 150 6 0.6555556 37 3 0.6404062 41 3 0.7777135 158 6 0.7188672 202 6 0.7351560 197 6 0.693848 133 5 0.698257 161 6 0.6880231 100 6 0.7611111 125 6 1.000000 11 0 0.7062500 79 6 0.688891 183 6 0.7440476 67 4 0.8050311 86 5 0.7698413 58 4 0.8285714 47 4 0.804762 69 4 0.771836 0.740461 0.6449425 0.635274 0.7430398 0.801406 0.688132 0.7603620 0.7598144 0.835928 0.7179843 0.640418 0.8375173 0.7048269 0.7635818 0.6271726 0.7949381 0.829481 0.783377 0.7468007 0.866724 0.677634 0.803804 0.8341476 0.8179088 0.8258980 0.720120 0.7746202 0.7949189 0.80142267 0.7630364 0.728638 0.7219786 0.7297531 0.7933934 1.0000e+00 0.735923 0.7419708 0.8858859 0.8014026 0.7317317 0.8270270 0.875075 1 0.772331 0.814536 -4.2706e-02 6 0.698416 0.6901833 0.00823294 9.7901e-01 1.1097e-02 weaklyHypometh 1.0000000 0.924732 insignificant 9.4476e-01 2.1018e-02 weaklyHypometh 1.000000 1.0000000 insignificant -0.02955194 0.3747651 lowCoverage 1 lowCoverage 0.772331 0.775417 -0.0083289 6 0.698416 0.669927 0.02848920 3.3017e-01 2.4853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6632e-01 3.9084e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0655268 2.6524e-01 insignificant 1.0000e+00 insignificant 0.772331 0.7461774 -0.0775775 4 0.698416 0.7099111 -0.0114948 9.9674e-01 0.00012154 lowCoverage 1.0000e+00 0.024308 lowCoverage 9.9787e-01 0.00010441 lowCoverage 1.0000e+00 0.050573 lowCoverage -0.0988886 1.0289e-03 lowCoverage 6.0522e-02 lowCoverage 0.814536 0.775417 0.0354861 6 0.6901833 0.669927 0.0202563 2.1556e-02 7.8958e-01 weaklyHypermeth 1.5850e-01 1.0000e+00 insignificant 4.9963e-01 5.5264e-01 insignificant 1.0000e+00 1.00000 insignificant -0.0359748 5.3819e-01 lowCoverage 1.0000e+00 lowCoverage 0.814536 0.7461774 -0.03363193 4 0.6901833 0.7099111 -1.9728e-02 9.4785e-01 2.8724e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8672e-01 0.03158935 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0693367 3.1700e-02 lowCoverage 0.90570000 lowCoverage 0.775417 0.7461774 -8.6758e-02 4 0.669927 0.7099111 -0.0399840 9.9922e-01 4.6413e-03 lowCoverage 1.00000000 5.3968e-02 lowCoverage 0.99858181 6.5779e-02 lowCoverage 1.00000 6.9241e-01 lowCoverage -0.03336187 5.4544e-01 lowCoverage 1.0000000 lowCoverage chr17 2006051 2007051 140603 SMG6 ENSG00000070366 0.7058673 73 5 0.727565 123 6 0.5180684 121 6 0.5120435 83 4 0.7773924 126 6 0.7620943 169 6 0.663095 133 6 0.7915550 144 6 0.7154040 94 3 0.7251094 105 6 0.671324 232 6 0.628346 86 6 0.824891 129 6 0.571581 51 4 0.726024 156 6 0.5387205 55 3 0.7684504 62 3 0.696803 91 4 0.781873 260 6 0.725033 114 6 0.8123583 50 6 0.546703 35 4 0.814815 57 3 0.6656450 93 6 0.737374 44 4 0.8549264 150 6 0.6555556 37 3 0.6404062 41 3 0.7777135 158 6 0.7188672 202 6 0.7351560 197 6 0.693848 133 5 0.698257 161 6 0.6880231 100 6 0.7611111 125 6 1.000000 11 0 0.7062500 79 6 0.688891 183 6 0.7440476 67 4 0.8050311 86 5 0.7698413 58 4 0.8285714 47 4 0.804762 69 4 0.771836 0.740461 0.6449425 0.635274 0.7430398 0.801406 0.688132 0.7603620 0.7598144 0.835928 0.7179843 0.640418 0.8375173 0.7048269 0.7635818 0.6271726 0.7949381 0.829481 0.783377 0.7468007 0.866724 0.677634 0.803804 0.8341476 0.8179088 0.8258980 0.720120 0.7746202 0.7949189 0.80142267 0.7630364 0.728638 0.7219786 0.7297531 0.7933934 1.0000e+00 0.735923 0.7419708 0.8858859 0.8014026 0.7317317 0.8270270 0.875075 1 0.772331 0.814536 -4.2706e-02 6 0.698416 0.6901833 0.00823294 9.7901e-01 1.1097e-02 weaklyHypometh 1.0000000 0.924732 insignificant 9.4476e-01 2.1018e-02 weaklyHypometh 1.000000 1.0000000 insignificant -0.02955194 0.3747651 lowCoverage 1 lowCoverage 0.772331 0.775417 -0.0083289 6 0.698416 0.669927 0.02848920 3.3017e-01 2.4853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6632e-01 3.9084e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0655268 2.6524e-01 insignificant 1.0000e+00 insignificant 0.772331 0.7461774 -0.0775775 4 0.698416 0.7099111 -0.0114948 9.9674e-01 0.00012154 lowCoverage 1.0000e+00 0.024308 lowCoverage 9.9787e-01 0.00010441 lowCoverage 1.0000e+00 0.050573 lowCoverage -0.0988886 1.0289e-03 lowCoverage 6.0522e-02 lowCoverage 0.814536 0.775417 0.0354861 6 0.6901833 0.669927 0.0202563 2.1556e-02 7.8958e-01 weaklyHypermeth 1.5850e-01 1.0000e+00 insignificant 4.9963e-01 5.5264e-01 insignificant 1.0000e+00 1.00000 insignificant -0.0359748 5.3819e-01 lowCoverage 1.0000e+00 lowCoverage 0.814536 0.7461774 -0.03363193 4 0.6901833 0.7099111 -1.9728e-02 9.4785e-01 2.8724e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8672e-01 0.03158935 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0693367 3.1700e-02 lowCoverage 0.90570000 lowCoverage 0.775417 0.7461774 -8.6758e-02 4 0.669927 0.7099111 -0.0399840 9.9922e-01 4.6413e-03 lowCoverage 1.00000000 5.3968e-02 lowCoverage 0.99858181 6.5779e-02 lowCoverage 1.00000 6.9241e-01 lowCoverage -0.03336187 5.4544e-01 lowCoverage 1.0000000 lowCoverage chr17 2031396 2032396 140617 SMG6 ENSG00000070366 0.8393764 356 7 0.766861 240 8 0.8083783 151 6 0.8449214 306 7 0.7762347 122 9 0.8108267 392 9 0.756892 162 9 0.8642323 150 8 0.7725851 118 6 0.8253648 111 5 0.897570 313 9 0.603312 61 6 0.841688 141 5 0.727778 19 2 0.559718 135 5 0.8834677 48 2 0.4496032 53 4 0.585894 311 6 0.928007 153 5 0.752972 265 8 0.8815819 103 9 0.635780 110 4 0.863715 221 8 0.9587302 109 7 0.817791 91 5 0.7337051 259 8 0.7491839 149 5 0.7655730 70 5 0.8550499 108 5 0.7044672 289 9 0.8422676 371 9 0.883108 465 9 0.019435 297 8 0.0000000 157 5 0.1250000 188 7 0.000000 89 4 0.0076998 177 9 0.061410 275 8 0.6710356 393 7 0.6543057 452 7 0.6774031 404 7 0.4222926 252 5 0.677288 412 7 0.822338 0.681373 0.8037623 0.820525 0.7570938 0.767013 0.685646 0.8224139 0.8257976 0.854994 0.8599103 0.658152 0.6975985 0.6425532 0.7044269 0.8237654 0.3851265 0.499731 0.864772 0.7788547 0.892746 0.607883 0.849759 0.9498701 0.7465271 0.6916739 0.767691 0.6118300 0.7923240 0.59095832 0.8196823 0.857850 0.0093182 0.0000000 0.0018855 4.5455e-05 0.022606 0.0297009 0.7231838 0.6026914 0.6099161 0.4405571 0.578816 4 0.765668 0.784556 -2.0255e-02 8 0.714456 0.8306640 -0.11620792 9.3082e-01 5.0571e-01 insignificant 1.0000000 1.000000 insignificant 7.6499e-01 4.9608e-01 insignificant 1.000000 1.0000000 insignificant -0.04279532 0.2735928 insignificant 1 insignificant 0.766093 0.010989 0.7525968 8 0.793840 0.030451 0.76338923 3.8177e-85 1.0000e+00 hypermethylated 3.8177e-82 1.0000e+00 hypermethylated 1.4920e-20 1.0000e+00 hypermethylated 1.4920e-17 1.0000000 hypermethylated 0.7291932 6.2491e-16 hypermethylated 3.1245e-13 hypermethylated 0.765668 0.5969681 0.1642065 7 0.714456 0.6295024 0.0849536 3.9286e-12 0.99169186 weaklyHypermeth 4.5884e-10 1.000000 weaklyHypermeth 1.1092e-06 0.95404269 weaklyHypermeth 1.5845e-04 1.000000 weaklyHypermeth 0.1443191 4.0231e-02 weaklyHypermeth 7.5741e-01 insignificant 0.784464 0.010989 0.7737878 8 0.8118489 0.030451 0.7813980 2.4833e-79 1.0000e+00 hypermethylated 2.4833e-76 1.0000e+00 hypermethylated 3.2160e-18 1.0000e+00 hypermethylated 3.2160e-15 1.00000 hypermethylated 0.7719885 1.2710e-13 hypermethylated 1.2710e-10 hypermethylated 0.784556 0.5969681 0.18564524 7 0.8306640 0.6295024 2.0116e-01 1.4706e-15 9.9351e-01 weaklyHypermeth 3.6765e-13 1.0000000 weaklyHypermeth 2.1670e-06 0.99281570 weaklyHypermeth 3.6117e-04 1.00000 weaklyHypermeth 0.1871144 1.4525e-02 weaklyHypermeth 0.58100348 insignificant 0.010989 0.5961236 -5.8500e-01 7 0.030451 0.5883360 -0.5578852 1.0000e+00 3.7008e-38 hypomethylated 1.00000000 3.7008e-35 hypomethylated 1.00000000 1.7700e-10 hypomethylated 1.00000 1.0615e-07 hypomethylated -0.58487414 7.7780e-05 hypomethylated 0.0064816 hypomethylated chr17 2116170 2117170 140651 SMG6 ENSG00000070366 0.8910527 306 6 0.890760 225 6 0.8709255 177 6 0.9815937 303 6 0.9761905 81 6 0.9291250 387 6 0.912432 168 6 0.9272114 214 6 0.8705024 206 6 0.8935131 126 6 0.884310 130 6 0.898718 69 6 0.955566 220 6 0.914791 85 6 0.905749 120 6 0.8226852 47 6 0.7888889 36 6 0.966527 395 6 0.968854 189 6 0.959992 289 6 0.8194444 28 2 0.893477 104 6 0.902491 178 6 0.9018084 97 6 0.944444 56 6 0.9506588 334 6 0.8875000 53 6 0.7657895 65 6 0.9406102 229 6 0.9425742 375 6 0.9655695 537 6 0.961918 359 6 0.909155 312 6 0.9238889 69 4 0.0000000 3 0 1.000000 16 2 0.9663866 81 6 0.941104 307 6 0.9727127 280 6 0.9576766 275 6 0.9652098 286 6 0.9135256 306 6 0.965613 354 6 0.886070 0.904256 0.8693366 0.976628 0.9816064 0.931543 0.898289 0.9310168 0.8857443 0.902132 0.8915405 0.917002 0.9552041 0.9180833 0.9192979 0.8479971 0.8437768 0.969688 0.967949 0.9556529 0.866595 0.916200 0.905993 0.8854681 0.9599428 0.9436798 0.887482 0.8112341 0.9325706 0.94913499 0.9643159 0.947582 0.9072278 0.9401717 0.6967945 1.0000e+00 0.958236 0.9187842 0.9742247 0.9617417 0.9603499 0.9141284 0.970235 6 0.926054 0.939959 -1.3998e-02 6 0.922396 0.9409630 -0.01856729 9.4665e-01 8.9779e-02 insignificant 1.0000000 1.000000 insignificant 8.9708e-01 3.4284e-01 insignificant 1.000000 1.0000000 insignificant 0.00411232 0.8454464 insignificant 1 insignificant 0.926054 0.921320 0.0035771 6 0.922396 0.928252 -0.00585653 2.2179e-01 3.0086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6172e-01 4.2018e-02 inconclusive 1.0000e+00 1.0000000 insignificant 0.1203804 4.8270e-01 lowCoverage 1.0000e+00 lowCoverage 0.926054 0.9560293 -0.0299975 6 0.922396 0.9555838 -0.0331881 9.8875e-01 0.03661558 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9376e-01 0.01709064 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0444781 1.2215e-02 weaklyHypometh 3.5223e-01 insignificant 0.939959 0.921320 0.0188825 6 0.9409630 0.928252 0.0127108 1.6586e-01 7.3751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1515e-01 2.7407e-01 insignificant 1.0000e+00 1.00000 insignificant 0.1162681 4.9805e-01 lowCoverage 1.0000e+00 lowCoverage 0.939959 0.9560293 -0.01605412 6 0.9409630 0.9555838 -1.4621e-02 8.9004e-01 2.3387e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.1309e-01 0.07220078 insignificant 1.0000e+00 1.00000 insignificant -0.0485904 3.1332e-02 weaklyHypometh 0.90570000 insignificant 0.921320 0.9560293 -3.4723e-02 6 0.928252 0.9555838 -0.0273316 9.3649e-01 1.6983e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.44100764 8.7713e-01 insignificant 1.00000 1.0000e+00 insignificant -0.16485852 3.4670e-01 lowCoverage 1.0000000 lowCoverage chr17 2253476 2254476 140657 MNT ENSG00000070444 0.7659726 162 5 0.785526 167 6 0.6553383 120 6 0.7734704 99 6 0.9044312 77 6 0.7517432 164 6 0.787931 112 5 0.7022441 107 5 0.6198938 71 5 0.7500000 31 5 0.707772 202 6 0.520000 25 5 0.832680 63 5 0.693056 69 5 0.707143 58 5 0.6333333 36 5 0.5447039 1155 5 0.846970 121 6 0.838725 66 5 0.893056 84 5 0.9814815 62 4 1.000000 3 0 0.804315 156 6 0.7514423 68 4 0.812500 16 1 0.7360097 239 6 0.7937951 106 3 0.8500000 21 3 0.7314103 56 5 0.8294670 260 6 0.7372034 354 6 0.804878 141 6 0.479119 131 6 0.3597222 83 3 0.5000000 12 2 NA 0 0 0.2678177 112 6 0.663034 181 6 0.7516740 194 6 0.7793522 187 6 0.8608466 102 5 0.8154212 124 5 0.854056 125 6 0.780706 0.781626 0.6481885 0.793080 0.9116197 0.814836 0.772715 0.7130847 0.6515444 0.830097 0.7450895 0.570874 0.8647630 0.7660194 0.7877947 0.7038835 0.5439367 0.890556 0.850571 0.9122168 0.973031 0.933457 0.789675 0.7603155 0.8543689 0.7612200 0.787080 0.8446602 0.7820513 0.84883379 0.7908863 0.826521 0.4770338 0.4704693 0.5198446 NA 0.286922 0.7601127 0.7728850 0.8065914 0.8793188 0.8380070 0.884112 0 0.685179 0.844804 -1.5759e-01 6 0.674151 0.7915299 -0.11737848 9.9993e-01 1.0131e-05 weaklyHypometh 1.0000000 0.010131 weaklyHypometh 9.9881e-01 3.1553e-02 weaklyHypometh 1.000000 1.0000000 insignificant -0.08367571 0.0237738 lowCoverage 1 lowCoverage 0.685179 0.512524 0.1639471 6 0.674151 0.481696 0.19245529 2.4311e-09 9.7672e-01 weaklyHypermeth 3.9212e-08 1.0000e+00 weaklyHypermeth 1.3152e-05 9.9960e-01 weaklyHypermeth 2.9226e-04 1.0000000 weaklyHypermeth 0.2817610 1.0570e-02 lowCoverage 1.6078e-01 lowCoverage 0.685179 0.7144809 -0.1515515 6 0.674151 0.8031338 -0.1289824 9.9981e-01 0.00011984 weaklyHypometh 1.0000e+00 0.024308 weaklyHypometh 9.9931e-01 0.03466114 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0765706 2.8361e-02 weaklyHypometh 6.3025e-01 insignificant 0.844804 0.512524 0.3236259 6 0.7915299 0.481696 0.3098338 9.1606e-12 9.9996e-01 hypermethylated 2.2487e-10 1.0000e+00 hypermethylated 1.1889e-06 1.0000e+00 hypermethylated 4.5725e-05 1.00000 hypermethylated 0.3654367 3.3729e-03 lowCoverage 7.0268e-02 lowCoverage 0.844804 0.7144809 -0.01184685 6 0.7915299 0.8031338 -1.1604e-02 8.9291e-01 2.2235e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4206e-01 0.28358345 insignificant 1.0000e+00 1.00000 insignificant 0.0071051 8.3380e-01 lowCoverage 1.00000000 lowCoverage 0.512524 0.7144809 -3.2983e-01 6 0.481696 0.8031338 -0.3214376 9.9975e-01 1.4987e-06 hypomethylated 1.00000000 4.0506e-05 hypomethylated 0.99996971 9.0901e-05 hypomethylated 1.00000 3.9522e-03 hypomethylated -0.35833163 4.2910e-03 lowCoverage 0.1100248 lowCoverage chr17 2557466 2558466 140666 KIAA0664 ENSG00000132361 0.9382962 392 8 0.757068 192 8 0.9129875 283 8 0.8957824 395 8 0.9026128 234 8 0.9054328 546 9 0.836425 214 8 0.8974494 285 8 0.9260994 226 8 0.8360660 333 8 0.882711 316 8 0.910117 205 6 0.927863 216 8 0.900000 194 8 0.853992 320 8 0.6041667 113 6 0.5555556 13 2 0.912521 626 8 0.939146 442 8 0.927878 358 8 0.9317211 106 7 0.886385 158 5 0.907811 274 8 0.6718615 161 5 0.901964 167 8 0.8238259 335 8 0.8717651 197 7 0.8752104 164 7 0.9088923 322 8 0.9522697 287 8 0.9035525 492 9 0.937942 358 8 0.809856 258 8 0.6326249 305 8 0.7857143 235 6 0.752879 138 8 0.7325690 266 8 0.740650 345 9 0.9144002 258 8 0.9588676 374 8 0.8361514 297 8 0.9404536 428 8 0.927555 292 8 0.929113 0.836496 0.9001540 0.959465 0.9128005 0.909506 0.912077 0.9036384 0.9002208 0.904988 0.8965320 0.866078 0.9229666 0.9101150 0.8437243 0.7584023 0.7235905 0.903026 0.925544 0.9273955 0.918697 0.878649 0.899169 0.7927985 0.9014955 0.9199249 0.846777 0.8714353 0.9086859 0.93998516 0.9380817 0.921314 0.7603978 0.5327307 0.8099893 8.3562e-01 0.818536 0.7886566 0.9090903 0.9487375 0.8492338 0.9134948 0.916460 7 0.903947 0.909302 -6.4963e-03 8 0.834107 0.9063943 -0.07228726 8.6648e-01 2.6379e-01 insignificant 1.0000000 1.000000 insignificant 7.8029e-01 5.7477e-01 insignificant 1.000000 1.0000000 insignificant -0.01999153 0.5357761 insignificant 1 insignificant 0.904237 0.783452 0.0889460 8 0.884184 0.682838 0.20134685 1.5540e-07 8.2453e-01 weaklyHypermeth 2.0181e-06 1.0000e+00 weaklyHypermeth 2.3899e-04 4.3461e-01 weaklyHypermeth 4.1205e-03 1.0000000 weaklyHypermeth 0.1187263 3.5940e-03 weaklyHypermeth 7.4875e-02 weaklyHypermeth 0.904237 0.9144936 -0.0157212 8 0.884184 0.9340221 -0.0498378 9.5212e-01 0.21864586 insignificant 1.0000e+00 1.000000 insignificant 9.1390e-01 0.48504052 insignificant 1.0000e+00 1.000000 insignificant -0.0543772 1.0683e-01 insignificant 1.0000e+00 insignificant 0.909241 0.783452 0.1088240 8 0.8970337 0.682838 0.2141962 7.5702e-05 9.1128e-01 weaklyHypermeth 8.8026e-04 1.0000e+00 weaklyHypermeth 4.5539e-03 6.6714e-01 weaklyHypermeth 5.9142e-02 1.00000 weaklyHypermeth 0.1387178 1.1726e-03 weaklyHypermeth 3.0067e-02 weaklyHypermeth 0.909241 0.9144936 -0.00755222 8 0.8970337 0.9340221 -3.6988e-02 8.0659e-01 2.8291e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5030e-01 0.38193921 insignificant 1.0000e+00 1.00000 insignificant -0.0343856 2.7572e-01 insignificant 1.00000000 insignificant 0.783452 0.9144936 -1.1011e-01 8 0.682838 0.9340221 -0.2511846 9.8666e-01 1.4819e-02 weaklyHypometh 1.00000000 1.5122e-01 insignificant 0.83606872 6.1886e-03 weaklyHypometh 1.00000 1.1051e-01 insignificant -0.17310344 5.0418e-04 weaklyHypometh 0.0210077 weaklyHypometh chr17 3805009 3806009 140676 P2RX1 ENSG00000108405 0.6012878 259 9 0.553523 537 9 0.6096021 326 10 0.6351178 255 8 0.8043888 182 9 0.9187025 377 9 0.774554 213 9 0.8747244 399 9 0.8075364 287 9 0.6960570 282 9 0.744963 450 9 0.716927 129 9 0.649126 493 9 0.622085 166 5 0.713980 325 9 0.6546296 82 9 0.6649819 79 6 0.600359 307 9 0.817587 711 9 0.741023 343 9 0.8482611 170 9 0.635129 137 6 0.719815 298 11 0.7283560 175 6 0.829668 110 5 0.6196525 565 11 0.8395957 261 9 0.8473879 171 9 0.7866683 406 9 0.6289712 630 11 0.6861611 724 11 0.768656 451 9 0.527893 425 9 0.5513454 313 9 0.4011819 395 7 0.395238 26 3 0.6297124 276 10 0.529719 520 9 0.4424053 286 9 0.5488229 342 9 0.5918535 213 8 0.5109648 360 9 0.541651 209 9 0.824227 0.729555 0.7767682 0.821885 0.7409199 0.900276 0.788236 0.8533261 0.7802803 0.871098 0.8476495 0.753227 0.7446377 0.8489429 0.8008357 0.6177484 0.7667807 0.748851 0.832994 0.8504322 0.882783 0.724687 0.838643 0.7874226 0.8486975 0.8212856 0.813612 0.8756835 0.8189254 0.84857480 0.8102063 0.804768 0.6994412 0.6153735 0.4406163 4.6493e-01 0.703961 0.6951414 0.6986155 0.7287043 0.7390460 0.7100055 0.742537 6 0.794930 0.792287 -1.4081e-02 9 0.630863 0.6873264 -0.05646306 9.8302e-01 6.3543e-01 insignificant 1.0000000 1.000000 insignificant 9.9586e-01 3.9559e-01 insignificant 1.000000 1.0000000 insignificant -0.03480243 0.3122082 insignificant 1 insignificant 0.795473 0.585166 0.1857798 9 0.650545 0.514986 0.13555894 7.1241e-14 1.0000e+00 weaklyHypermeth 1.5158e-12 1.0000e+00 weaklyHypermeth 2.0418e-07 9.9999e-01 weaklyHypermeth 7.8531e-06 1.0000000 weaklyHypermeth 0.2042095 1.1460e-03 weaklyHypermeth 3.0158e-02 weaklyHypermeth 0.794897 0.7303052 0.0844532 9 0.602468 0.5178380 0.0846302 1.0960e-10 0.37187521 weaklyHypermeth 9.1329e-09 1.000000 weaklyHypermeth 1.0089e-05 0.47196047 weaklyHypermeth 8.4076e-04 1.000000 weaklyHypermeth 0.1829183 1.6362e-04 weaklyHypermeth 2.7270e-02 weaklyHypermeth 0.793930 0.585166 0.2034978 9 0.7262116 0.514986 0.2112254 2.8313e-15 1.0000e+00 hypermethylated 8.3275e-14 1.0000e+00 hypermethylated 1.1025e-07 1.0000e+00 hypermethylated 5.0113e-06 1.00000 hypermethylated 0.2390119 3.7605e-04 hypermethylated 1.1752e-02 hypermethylated 0.792287 0.7304965 0.09897391 9 0.6873264 0.5522781 1.3505e-01 6.4856e-14 9.1408e-01 weaklyHypermeth 1.0809e-11 1.0000000 weaklyHypermeth 5.2069e-06 0.99226374 weaklyHypermeth 6.5086e-04 1.00000 weaklyHypermeth 0.2177208 5.1023e-05 hypermethylated 0.01321123 hypermethylated 0.585466 0.7344754 -7.3593e-02 9 0.557902 0.5609911 -0.0030895 5.3567e-01 1.9337e-02 weaklyHypometh 1.00000000 1.8416e-01 insignificant 0.94202236 3.3729e-02 weaklyHypometh 1.00000 4.1133e-01 insignificant -0.02129114 6.4654e-01 insignificant 1.0000000 insignificant chr17 4185851 4186851 140683 ENSG00000209516 0.6546782 147 5 0.638690 70 5 0.5585758 82 5 0.6771579 108 5 0.6955556 41 4 0.6525442 279 5 0.554405 84 5 0.7825271 69 5 0.6174603 73 5 0.7190821 67 5 0.595514 143 5 0.702222 46 5 0.738791 95 5 NA 0 0 0.569264 65 5 0.5838095 45 5 0.5814530 59 5 0.729722 80 5 0.616468 106 5 0.711441 202 5 0.6138462 43 4 0.704444 35 4 0.630878 95 5 0.5222222 44 3 0.699495 30 3 0.6260346 175 5 0.6818182 33 3 0.6264646 34 3 0.6386111 49 5 0.6149309 166 5 0.6870840 194 5 0.645747 274 5 0.590830 86 5 0.7401998 59 5 0.5717706 124 5 0.760000 34 4 0.7028571 44 5 0.709501 134 5 0.6802782 128 5 0.7275455 135 5 0.6636667 93 5 0.6992583 166 5 0.685131 133 5 0.686890 0.669478 0.5329789 0.624077 0.6954733 0.648115 0.552543 0.7726134 0.5852930 0.738236 0.5726136 0.746914 0.7321768 NA 0.5957057 0.5762787 0.6251847 0.755744 0.612608 0.7305024 0.742585 0.586420 0.607517 0.5657632 0.6440394 0.6564701 0.618787 0.7250281 0.6936728 0.62741082 0.7022711 0.677972 0.6090808 0.7535150 0.6285986 6.9815e-01 0.686067 0.7717317 0.6768591 0.7542368 0.6694136 0.7035072 0.672444 3 0.666846 0.649317 9.5389e-03 5 0.654688 0.6420774 0.01261075 3.6881e-01 6.5797e-01 insignificant 1.0000000 1.000000 insignificant 3.9847e-01 5.3251e-01 insignificant 1.000000 1.0000000 insignificant 0.01058068 0.6230852 lowCoverage 1 lowCoverage 0.666846 0.671518 -0.0069630 5 0.654688 0.654958 -0.00027001 1.6875e-03 1.5212e-01 inconclusive 1.5482e-02 1.0000e+00 inconclusive 6.4243e-02 1.2995e-01 insignificant 5.3536e-01 1.0000000 insignificant -0.0276477 4.6356e-01 lowCoverage 1.0000e+00 lowCoverage 0.666846 0.7068702 -0.0396410 5 0.654688 0.6931685 -0.0384803 9.8581e-01 0.04781343 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9483e-01 0.01282736 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0396305 5.0420e-02 lowCoverage 8.5457e-01 lowCoverage 0.649317 0.671518 -0.0143140 5 0.6420774 0.654958 -0.0128808 1.3019e-03 5.9203e-02 inconclusive 1.2764e-02 1.0000e+00 inconclusive 1.0612e-01 5.2394e-02 insignificant 8.1771e-01 1.00000 insignificant -0.0382284 3.1381e-01 lowCoverage 1.0000e+00 lowCoverage 0.649317 0.7068702 -0.04702366 5 0.6420774 0.6931685 -5.1091e-02 9.9839e-01 6.7868e-03 weaklyHypometh 1.0000e+00 0.9695401 insignificant 9.8952e-01 0.10132607 insignificant 1.0000e+00 1.00000 insignificant -0.0502112 1.3935e-02 lowCoverage 0.58062904 lowCoverage 0.671518 0.7068702 -3.2248e-02 5 0.654958 0.6931685 -0.0382103 6.6914e-01 2.3770e-03 weaklyHypometh 1.00000000 3.1499e-02 weaklyHypometh 0.72784190 1.4827e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01198280 7.3586e-01 lowCoverage 1.0000000 lowCoverage chr17 4733494 4734494 140692 MINK1 ENSG00000141503 0.8722338 283 9 0.804290 186 7 0.8732002 202 10 0.9178550 310 9 0.9060606 58 5 0.8786902 366 10 0.824277 114 10 0.8750000 159 6 0.8812687 203 9 0.8545689 186 10 0.845197 191 10 0.859259 56 7 0.954367 191 9 NA 0 0 0.919343 152 9 0.6873810 58 8 0.7190476 83 9 0.886619 290 9 0.937568 188 9 0.873025 332 10 0.7519048 69 9 0.804086 175 9 0.902304 237 10 0.8855021 125 9 0.920592 153 9 0.8893910 234 10 0.8707620 174 10 0.9115385 71 9 0.7896131 114 5 0.9164323 239 9 0.8808930 350 10 0.851061 385 10 0.587179 238 9 0.6392197 158 9 0.1942857 70 2 0.502991 94 9 0.6608658 77 8 0.660394 205 9 0.8558395 285 9 0.8899746 364 9 0.9109232 245 9 0.9340561 322 9 0.854131 331 9 0.845238 0.818274 0.8522287 0.886652 0.9232880 0.887303 0.831392 0.8720754 0.9145966 0.875940 0.8468722 0.889198 0.9485986 NA 0.9278036 0.6662823 0.7440945 0.876726 0.940143 0.8987576 0.795557 0.831821 0.912357 0.9194861 0.9110356 0.8976592 0.883823 0.9394306 0.7977960 0.93999550 0.8964377 0.824910 0.6388758 0.6783367 0.4777346 4.6536e-01 0.683376 0.6954126 0.8961718 0.9133643 0.9103752 0.9276811 0.842306 4 0.876663 0.879192 -1.0297e-02 9 0.865966 0.8727086 -0.00674244 6.1889e-01 2.7143e-01 insignificant 1.0000000 1.000000 insignificant 6.0133e-01 3.3269e-01 insignificant 1.000000 1.0000000 insignificant -0.00296706 0.8938122 insignificant 1 insignificant 0.876663 0.642518 0.2177791 9 0.865966 0.632367 0.23359962 2.4032e-28 1.0000e+00 hypermethylated 1.2016e-26 1.0000e+00 hypermethylated 8.1775e-14 1.0000e+00 hypermethylated 1.3629e-11 1.0000000 hypermethylated 0.3207170 6.5546e-03 weaklyHypermeth 1.2097e-01 insignificant 0.876663 0.9095023 -0.0258823 9 0.865966 0.8843538 -0.0183876 8.2119e-01 0.06791512 insignificant 1.0000e+00 1.000000 insignificant 8.2475e-01 0.24379594 insignificant 1.0000e+00 1.000000 insignificant -0.0274453 2.3094e-01 insignificant 1.0000e+00 insignificant 0.879192 0.642518 0.2354360 9 0.8727086 0.632367 0.2403421 3.3124e-19 1.0000e+00 hypermethylated 1.4402e-17 1.0000e+00 hypermethylated 2.5021e-11 1.0000e+00 hypermethylated 3.5744e-09 1.00000 hypermethylated 0.3236841 6.2640e-03 weaklyHypermeth 1.0440e-01 insignificant 0.879192 0.9095023 -0.01518441 9 0.8727086 0.8843538 -1.1645e-02 8.8389e-01 3.4680e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7297e-01 0.46248013 insignificant 1.0000e+00 1.00000 insignificant -0.0244783 2.9115e-01 insignificant 1.00000000 insignificant 0.642518 0.9095023 -2.4708e-01 9 0.632367 0.8843538 -0.2519872 1.0000e+00 2.7231e-13 hypomethylated 1.00000000 1.8154e-11 hypomethylated 1.00000000 2.1231e-10 hypomethylated 1.00000 1.0615e-07 hypomethylated -0.34816235 4.5684e-03 weaklyHypometh 0.1142090 insignificant chr17 5875916 5876916 140731 ENSG00000091592 0.9411462 127 2 0.744601 127 6 0.5389610 66 6 0.5468102 124 5 0.6666667 61 6 0.9556107 171 6 0.787418 58 3 0.6495817 105 6 0.5801282 52 2 0.9449405 36 2 0.720987 129 6 0.767196 26 2 0.894643 81 3 0.892593 25 3 0.857421 49 3 0.6666667 10 1 0.5833333 8 1 0.944258 139 2 0.621465 69 3 0.874028 139 6 0.6041667 18 2 0.878364 51 2 0.718992 79 5 0.9629630 27 2 0.884524 59 6 0.8345569 99 6 0.8306663 55 3 0.7000000 21 1 0.5961554 103 6 0.8099781 122 6 0.8206649 140 6 0.903720 122 6 0.641417 134 6 0.4765339 55 3 0.3600000 23 2 0.507937 32 4 0.5361656 72 6 0.544735 118 6 0.7753683 123 2 0.7787879 109 5 0.8260946 125 5 0.9688333 97 2 0.745123 167 5 0.881109 0.858978 0.6887963 0.868254 1.0000000 0.887820 0.887313 0.9296375 0.8513203 0.832489 0.9618927 0.792466 0.9232409 0.8452736 0.8914824 0.4477612 0.5746269 0.891208 0.918114 0.9082834 0.850746 0.882173 0.861472 0.8772803 0.7776119 0.8536603 0.795993 0.9447761 0.9072031 0.86082090 0.9000282 0.889218 0.6858730 0.3795207 0.1837149 6.6667e-01 0.568920 0.6658503 0.9105417 0.8629579 0.8677077 0.9236940 0.910722 2 0.833958 0.847098 -3.1579e-02 3 0.754582 0.7019367 0.05264533 6.8155e-01 1.8482e-02 lowCoverage 1.0000000 1.000000 lowCoverage 5.5270e-01 2.4057e-01 lowCoverage 1.000000 1.0000000 lowCoverage -0.03647321 0.4437101 lowCoverage 1 lowCoverage 0.833854 0.571429 0.2397908 3 0.713679 0.531741 0.18193823 1.8824e-14 9.9788e-01 lowCoverage 4.1830e-13 1.0000e+00 lowCoverage 5.2796e-05 9.9998e-01 lowCoverage 1.0559e-03 1.0000000 lowCoverage 0.2477915 2.4153e-04 lowCoverage 7.5479e-03 lowCoverage 0.826610 0.8566828 -0.0340092 2 0.732198 0.8203138 -0.0881163 9.7410e-01 0.17113808 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.6989e-01 0.30692983 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0599186 2.7022e-01 lowCoverage 1.0000e+00 lowCoverage 0.849944 0.571429 0.2843073 6 0.8189261 0.531741 0.2871853 7.8878e-16 1.0000e+00 hypermethylated 2.3903e-14 1.0000e+00 hypermethylated 1.2254e-08 1.0000e+00 hypermethylated 7.2085e-07 1.00000 hypermethylated 0.2842647 9.6307e-05 lowCoverage 3.5669e-03 lowCoverage 0.835897 0.8566828 -0.01263937 5 0.6651905 0.8203138 -1.5512e-01 8.9288e-01 6.0304e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6795e-01 0.39592182 insignificant 1.0000e+00 1.00000 insignificant -0.0234454 6.6188e-01 lowCoverage 1.00000000 lowCoverage 0.514205 0.8564516 -3.2391e-01 5 0.474674 0.7843766 -0.3097023 1.0000e+00 7.8025e-09 hypomethylated 1.00000000 3.0010e-07 hypomethylated 0.99999999 8.0929e-06 hypomethylated 1.00000 5.3953e-04 hypomethylated -0.30771010 3.5863e-04 lowCoverage 0.0179314 lowCoverage chr17 7036391 7037391 140771 ASGR1 ENSG00000141505 0.9272076 154 4 0.771329 70 5 0.7876984 50 5 0.9065697 221 6 0.6533333 18 1 0.7003140 201 6 0.880556 56 4 0.9107143 75 6 0.8125000 10 0 0.9666667 26 2 0.891965 152 6 0.733333 8 0 0.818452 98 6 NA 0 0 0.933333 16 1 1.0000000 2 0 0.6111111 9 0 0.755852 191 6 0.917654 186 6 0.913982 125 4 0.9360269 44 4 0.919516 87 4 0.822818 119 4 0.5476190 15 0 0.937500 55 6 0.9629435 125 6 0.7485269 49 5 0.9375000 11 1 0.9086957 98 6 0.9261961 153 6 0.7895007 210 6 0.798423 164 6 0.800000 37 4 0.9076671 120 6 0.8473271 145 4 1.000000 14 0 0.9212963 50 6 0.858554 111 6 0.8213784 147 4 0.9007576 162 5 0.7872265 162 4 0.9801587 160 4 0.809860 115 4 0.903876 0.794452 0.7419218 0.906908 0.6488095 0.885531 0.869048 0.8890306 0.8012061 1.000000 0.8968290 0.690476 0.9568452 NA 0.9285714 0.9206752 0.7380952 0.882818 0.911772 0.8935215 0.913781 0.970543 0.792305 0.5595238 0.9241071 0.9648112 0.776199 0.9064360 0.9106366 0.90328084 0.9159072 0.883127 0.9500000 0.9010719 0.8050815 1.0000e+00 0.944444 0.8415635 0.9475305 0.9318182 0.7634937 0.9742772 0.790241 0 0.901679 0.903025 -3.8346e-03 6 0.729365 0.9268598 -0.19749452 8.5472e-01 4.3502e-01 insignificant 1.0000000 1.000000 insignificant 7.7436e-01 4.1098e-01 insignificant 1.000000 1.0000000 insignificant -0.01648763 0.7038605 lowCoverage 1 lowCoverage 0.903187 0.858650 0.0310803 6 0.889154 0.854427 0.03472680 1.1269e-01 5.5272e-01 insignificant 7.3175e-01 1.0000e+00 insignificant 9.9252e-01 3.7951e-02 inconclusive 1.0000e+00 1.0000000 insignificant -0.0526897 1.8792e-01 lowCoverage 1.0000e+00 lowCoverage 0.902220 0.9490617 -0.0316775 4 0.833560 0.7711515 0.0624089 8.6886e-01 0.19412868 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5623e-01 0.26050754 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0234250 6.0513e-01 lowCoverage 1.0000e+00 lowCoverage 0.901961 0.859539 0.0445822 6 0.8851931 0.890820 -0.0056270 4.6662e-01 8.8622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9919e-01 1.2947e-01 insignificant 1.0000e+00 1.00000 insignificant -0.0362020 4.3153e-01 lowCoverage 1.0000e+00 lowCoverage 0.902852 0.9490617 -0.03559900 4 0.9164112 0.7711515 1.4526e-01 8.9452e-01 2.2328e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.6212e-01 0.24563352 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0069373 8.9139e-01 lowCoverage 1.00000000 lowCoverage 0.858650 0.9503356 -5.3456e-02 4 0.854427 0.8996767 -0.0452498 9.0932e-01 2.3500e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.14391725 9.3288e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.02926467 5.3882e-01 lowCoverage 1.0000000 lowCoverage chr17 7048456 7049456 140772 ASGR1 ENSG00000141505 0.0986987 745 21 0.113469 822 21 0.1169296 1189 23 0.1446001 838 20 0.1473850 856 23 0.1300114 1461 24 0.170936 926 24 0.1328693 1089 24 0.1370035 1367 23 0.0897808 1276 22 0.125689 823 23 0.174880 923 22 0.080134 941 22 0.076690 668 18 0.112883 1320 22 0.1311538 912 23 0.1442714 347 15 0.136582 1031 20 0.161518 1110 21 0.110784 1062 23 0.1018898 476 26 0.085331 716 22 0.101722 740 22 0.1022002 545 25 0.110050 496 22 0.0867404 1126 23 0.1191343 1016 24 0.1140156 815 27 0.1473151 672 21 0.1122869 1289 23 0.1157507 1581 23 0.186705 1275 22 0.024611 771 23 0.0169615 447 21 0.0583333 360 16 0.131242 136 9 0.0888166 833 26 0.020613 946 23 0.0683250 982 20 0.1352584 781 21 0.1760433 664 18 0.1627713 754 20 0.080114 767 20 0.117186 0.106375 0.1395600 0.122697 0.1308119 0.151001 0.146326 0.1220394 0.1216871 0.127125 0.1356834 0.125217 0.1118142 0.1309423 0.1220281 0.1417218 0.1443567 0.119618 0.145544 0.1303163 0.140842 0.070078 0.137236 0.1004822 0.1137558 0.1066573 0.109020 0.1090766 0.1056464 0.10532062 0.0998043 0.145529 0.0291418 0.0145580 0.0113544 4.2524e-02 0.072876 0.0172155 0.0429954 0.0926987 0.1071141 0.1079842 0.070847 20 0.114225 0.100037 1.2195e-02 22 0.140811 0.1229022 0.01790926 2.5970e-01 9.1801e-01 insignificant 1.0000000 1.000000 insignificant 1.9009e-01 9.0235e-01 insignificant 1.000000 1.0000000 insignificant 0.01155172 0.2634885 insignificant 1 insignificant 0.114203 0.032637 0.0992226 22 0.143512 0.052608 0.09090320 7.0745e-16 9.8601e-01 weaklyHypermeth 1.6452e-14 1.0000e+00 weaklyHypermeth 4.0437e-04 9.9662e-01 weaklyHypermeth 6.3183e-03 1.0000000 weaklyHypermeth 0.0700506 1.1583e-02 weaklyHypermeth 1.6315e-01 insignificant 0.114802 0.0970357 0.0562376 20 0.171927 0.1365629 0.0353640 4.2085e-08 0.65146542 weaklyHypermeth 2.0041e-06 1.000000 weaklyHypermeth 9.2786e-05 0.98943408 weaklyHypermeth 4.9594e-03 1.000000 weaklyHypermeth 0.0023110 9.2243e-01 insignificant 1.0000e+00 insignificant 0.100131 0.032637 0.0837371 22 0.1340752 0.052608 0.0814668 6.5719e-06 9.5715e-01 weaklyHypermeth 8.1134e-05 1.0000e+00 weaklyHypermeth 1.0424e-02 9.9303e-01 weaklyHypermeth 1.1209e-01 1.00000 insignificant 0.0584988 2.4235e-02 weaklyHypermeth 3.1474e-01 insignificant 0.100440 0.0972891 0.04095221 20 0.1545848 0.1710457 -1.6461e-02 2.9640e-02 7.6794e-01 weaklyHypermeth 4.5601e-01 1.0000000 insignificant 6.6562e-02 0.99326858 insignificant 1.0000e+00 1.00000 insignificant -0.0092407 7.0482e-01 insignificant 1.00000000 insignificant 0.032721 0.0970603 -5.3366e-02 20 0.062003 0.1414402 -0.0794375 9.0421e-01 9.2224e-02 insignificant 1.00000000 7.2050e-01 insignificant 0.95194540 3.9871e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06773957 4.3794e-02 weaklyHypometh 0.5839236 insignificant chr17 7051928 7052928 140773 ASGR1 ENSG00000141505 0.0968978 298 9 0.067233 145 9 0.2621801 152 9 0.1256257 200 10 0.0866667 165 9 0.3352736 402 9 0.210801 144 9 0.1851106 139 9 0.1418755 130 7 0.1681035 144 7 0.288152 127 9 0.154054 122 7 0.122567 81 7 0.117216 46 3 0.072789 125 5 0.1891534 54 4 0.0400000 59 4 0.325264 540 9 0.165401 221 7 0.122302 309 9 0.3442344 89 7 0.140194 144 7 0.196328 249 10 0.0188034 109 9 0.155182 147 7 0.1402368 145 9 0.1455868 245 9 0.0762349 67 7 0.1162120 163 7 0.0197835 187 9 0.2206645 314 9 0.199033 273 7 0.301997 136 8 0.5073880 208 7 0.2380952 115 6 0.560794 98 7 0.4442683 86 8 0.539897 187 9 0.1447068 315 9 0.1939444 256 7 0.0736355 195 5 0.1466053 212 5 0.121063 234 9 0.047197 0.092560 0.2336922 0.028094 0.0850412 0.086786 0.254737 0.1545935 0.1050912 0.162766 0.1918973 0.118180 0.1026614 0.1965983 0.0588339 0.1886253 0.1121495 0.150637 0.158735 0.0444257 0.206197 0.090432 0.130783 0.0200840 0.1077962 0.1514998 0.106656 0.0920507 0.1406384 0.01735655 0.0491025 0.184148 0.2291532 0.3275761 0.2875620 5.1553e-01 0.427109 0.4200836 0.0482007 0.0882828 0.0694541 0.1440029 0.148713 5 0.123265 0.115493 1.6427e-03 9 0.227783 0.1842252 0.04355815 6.7443e-01 8.0682e-01 insignificant 1.0000000 1.000000 insignificant 3.8634e-01 9.2941e-01 insignificant 1.000000 1.0000000 insignificant 0.01612548 0.6191573 insignificant 1 insignificant 0.122778 0.386747 -0.2675739 9 0.168382 0.386397 -0.21801450 9.9999e-01 2.0248e-21 hypomethylated 1.0000e+00 1.0124e-18 hypomethylated 9.9993e-01 3.9828e-06 hypomethylated 1.0000e+00 0.0019914 hypomethylated -0.2682400 3.1012e-03 weaklyHypometh 6.8343e-02 weaklyHypometh 0.122910 0.0957096 0.0274715 9 0.228822 0.1309955 0.0978261 4.1762e-01 0.69222637 insignificant 1.0000e+00 1.000000 insignificant 6.2219e-01 0.93198163 insignificant 1.0000e+00 1.000000 insignificant 0.0278422 3.2472e-01 insignificant 1.0000e+00 insignificant 0.115132 0.386747 -0.2651852 9 0.1599348 0.386397 -0.2264617 1.0000e+00 3.5959e-15 hypomethylated 1.0000e+00 1.7980e-12 hypomethylated 1.0000e+00 3.3497e-05 hypomethylated 1.0000e+00 0.02753 hypomethylated -0.2843655 1.8781e-03 weaklyHypometh 4.2685e-02 weaklyHypometh 0.114313 0.0957096 0.01944062 9 0.1747277 0.1309955 4.3732e-02 4.7610e-01 6.6437e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.1797e-01 0.89888844 insignificant 1.0000e+00 1.00000 insignificant 0.0117168 7.2308e-01 insignificant 1.00000000 insignificant 0.385836 0.0957886 2.7258e-01 9 0.380717 0.1419118 0.2388056 1.0522e-06 1.0000e+00 hypermethylated 0.00035075 1.0000e+00 hypermethylated 0.00049658 1.0000e+00 hypermethylated 0.24829 1.0000e+00 insignificant 0.29608228 1.9150e-03 weaklyHypermeth 0.0652783 weaklyHypermeth chr17 7284447 7285447 140785 FGF11 ENSG00000161958 0.0063291 154 4 0.011631 258 7 0.0023041 351 7 0.0028571 82 3 0.0178054 203 7 0.0037106 182 6 0.134881 296 7 0.0024631 204 7 0.0032788 282 7 0.0054792 268 6 0.016251 344 7 0.029306 270 7 0.000000 288 6 0.000000 45 1 0.011004 306 6 0.0163646 276 6 0.0079365 215 6 0.000000 82 3 0.160041 366 6 0.019033 210 6 0.0034843 144 7 0.000000 78 5 0.011590 242 6 0.0044643 144 7 0.182796 44 2 0.0087302 291 7 0.0091507 235 7 0.0077347 163 7 0.0081169 233 6 0.0028571 321 7 0.0000000 434 7 0.014719 295 6 0.014702 182 6 0.0276455 141 6 0.2677970 202 5 0.000000 41 3 0.0647538 135 7 0.048026 227 7 0.0076859 178 5 0.0026954 168 6 0.0000000 57 3 0.0000000 128 4 0.024561 115 3 0.024309 0.020429 0.0007705 0.012803 0.0383827 0.016627 0.021104 0.0110367 0.0092104 0.014718 0.0049052 0.026420 0.0000000 0.0024573 0.0060215 0.0110606 0.0015165 0.000000 0.012574 0.0110285 0.015613 0.000000 0.022952 0.0011374 0.0622125 0.0216030 0.019108 0.0228366 0.0363709 0.00063694 0.0000000 0.026462 0.0288108 0.0298226 0.0454637 0.0000e+00 0.039795 0.0260858 0.0234700 0.0027641 0.0000000 0.0000000 0.075025 3 0.012174 0.012195 -6.0163e-05 7 0.025373 0.0069327 0.01844001 8.5938e-02 7.9111e-01 insignificant 1.0000000 1.000000 insignificant 1.0480e-01 9.0662e-01 insignificant 1.000000 1.0000000 insignificant 0.00139691 0.9378129 insignificant 1 insignificant 0.012179 0.042026 -0.0299598 6 0.028544 0.041386 -0.01284144 9.9260e-01 3.1953e-03 weaklyHypometh 1.0000e+00 5.3254e-01 insignificant 9.8897e-01 7.9885e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0479535 2.9727e-01 insignificant 1.0000e+00 insignificant 0.011979 0.0185759 -0.0067986 4 0.010687 0.0066415 0.0040457 2.7888e-01 0.80579352 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.0734e-01 0.97903738 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0155452 1.6313e-01 lowCoverage 1.0000e+00 lowCoverage 0.012218 0.042026 -0.0301407 6 0.0077993 0.041386 -0.0335865 9.9445e-01 1.1877e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9352e-01 7.0683e-03 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0493504 2.9419e-01 insignificant 1.0000e+00 insignificant 0.012218 0.0185759 -0.00360628 4 0.0077993 0.0066415 1.1578e-03 8.3075e-01 6.6076e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.8734e-01 0.90785634 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0141483 3.7679e-01 lowCoverage 1.00000000 lowCoverage 0.042071 0.0186335 8.1856e-03 4 0.047298 0.0075903 0.0397077 2.4645e-01 9.8672e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.07083234 9.9932e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.06349877 1.7920e-01 lowCoverage 1.0000000 lowCoverage chr17 7753600 7754600 140800 SCARNA21 ENSG00000221092 0.9149515 142 5 0.420513 137 5 0.9369048 166 5 0.9333077 130 5 0.9629630 60 5 0.7675059 194 5 0.631519 76 5 0.9964912 127 5 0.9181130 129 5 0.9312155 139 5 0.841799 204 5 0.918711 74 5 0.913922 132 5 0.917216 123 5 0.923576 160 5 0.9300000 52 5 0.0000000 2 0 0.737971 211 5 0.969307 319 5 0.826501 136 5 0.7391304 59 5 0.762037 63 5 0.970280 122 5 0.4917597 93 5 0.527778 46 5 0.9035684 116 5 0.7116357 166 5 0.4833333 78 8 0.7593877 200 5 0.9505952 110 5 0.9371154 139 5 0.727983 206 5 0.691071 84 5 0.7890196 79 5 0.7125000 106 1 0.960000 26 5 0.7306397 68 5 0.927038 127 5 0.9186688 105 5 0.9800000 186 5 0.9307190 172 5 0.6938776 110 5 0.649915 135 5 0.903734 0.697739 0.9263361 0.930102 0.9559306 0.909300 0.784207 0.9940040 0.8927362 0.914142 0.8190551 0.922431 0.9026227 0.9095686 0.8954275 0.8803797 NA 0.875904 0.968184 0.7938497 0.970281 0.886428 0.933257 0.8666747 0.9145570 0.9062604 0.915391 0.9414909 0.9005909 0.94028782 0.9317957 0.913036 0.9617616 0.7213204 0.6816983 9.6962e-01 0.956655 0.9205323 0.9220779 0.9701477 0.9228096 0.9758891 0.917555 5 0.892001 0.891039 -1.6586e-02 5 0.752193 0.5345628 0.21762979 8.4715e-01 7.6748e-01 insignificant 1.0000000 1.000000 insignificant 9.5843e-01 3.6422e-01 insignificant 1.000000 1.0000000 insignificant 0.07257418 0.3289980 lowCoverage 1 lowCoverage 0.891882 0.820408 0.0523964 5 0.659265 0.596267 0.06299819 5.4070e-01 8.7554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9949e-01 1.9409e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0179130 8.0277e-01 lowCoverage 1.0000e+00 lowCoverage 0.892513 0.9420904 -0.0521711 5 0.646303 0.6772094 -0.0309067 9.9919e-01 0.07282873 insignificant 1.0000e+00 1.000000 insignificant 9.9642e-01 0.11005252 insignificant 1.0000e+00 1.000000 insignificant -0.0150117 8.6469e-01 lowCoverage 1.0000e+00 lowCoverage 0.895307 0.820408 0.0684722 5 0.6100239 0.596267 0.0137572 5.0617e-01 9.8007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9389e-01 8.3395e-01 insignificant 1.0000e+00 1.00000 insignificant -0.0546611 4.4086e-01 lowCoverage 1.0000e+00 lowCoverage 0.900947 0.9420904 -0.03306551 5 0.6614559 0.6772094 -1.5754e-02 9.5287e-01 2.5497e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.5549e-01 0.69579742 insignificant 1.0000e+00 1.00000 insignificant -0.0875859 3.2715e-01 insignificant 1.00000000 insignificant 0.823409 0.9420904 -1.1200e-01 5 0.633829 0.6772094 -0.0433808 9.8800e-01 3.1368e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.80676044 9.8458e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03292473 7.0040e-01 lowCoverage 1.0000000 lowCoverage chr17 8988703 8989703 140821 ENSG00000216007 0.8699924 146 7 0.626238 89 7 0.3833333 40 5 0.8794350 144 7 0.8333333 8 0 0.6132381 181 8 0.850000 22 1 0.7291667 63 7 0.3989418 50 6 0.6250000 32 2 0.845355 121 7 0.547619 22 1 0.737500 89 5 0.716003 67 5 0.591270 37 4 0.6666667 6 0 0.0000000 2 0 0.753535 167 7 0.820426 63 7 0.646561 99 7 0.6180556 44 3 0.546144 110 7 0.703704 56 3 0.7037037 34 3 0.761037 126 7 0.8423841 90 7 0.6691980 79 6 0.5312500 25 2 0.8352213 53 5 0.8612782 96 7 0.6564623 99 7 0.724308 187 9 0.207145 113 7 0.1502404 66 7 0.3766234 194 6 0.000000 85 5 0.1665498 127 9 0.024233 181 7 0.6709060 85 7 0.7315873 104 7 0.6924644 115 7 0.4826840 39 3 0.558052 88 7 0.843543 0.715983 0.4085366 0.838463 0.6824848 0.781261 0.936585 0.7894309 0.4831591 0.707317 0.8163765 0.761641 0.8566057 0.8030689 0.8395542 0.5767937 NA 0.746561 0.754279 0.7932636 0.678354 0.670971 0.853659 0.8563718 0.8454075 0.7935628 0.792950 0.7505571 0.8522463 0.80673941 0.8346397 0.891147 0.2361970 0.1554878 0.2904656 0.0000e+00 0.194435 0.0215899 0.6257469 0.7375881 0.6489359 0.5103474 0.563242 1 0.750691 0.778894 -3.9070e-02 7 0.635241 0.6655958 -0.03035436 9.7041e-01 1.5364e-01 insignificant 1.0000000 1.000000 insignificant 9.8767e-01 1.6055e-01 insignificant 1.000000 1.0000000 insignificant -0.04771476 0.4062500 lowCoverage 1 lowCoverage 0.750691 0.201835 0.5554066 7 0.635241 0.211049 0.42419276 1.9460e-35 9.6411e-01 hypermethylated 1.7691e-33 1.0000e+00 hypermethylated 2.6034e-13 9.9963e-01 hypermethylated 3.7191e-11 1.0000000 hypermethylated 0.5025489 1.1217e-05 lowCoverage 5.3415e-04 lowCoverage 0.780259 0.6728538 0.1291368 7 0.798780 0.6597198 0.1390600 2.3321e-05 0.99975586 weaklyHypermeth 8.0417e-04 1.000000 weaklyHypermeth 4.8599e-04 0.99967620 weaklyHypermeth 1.9439e-02 1.000000 weaklyHypermeth 0.0295419 6.6151e-01 lowCoverage 1.0000e+00 lowCoverage 0.779338 0.201307 0.5892082 7 0.7263965 0.172676 0.5537204 3.0355e-28 9.9590e-01 hypermethylated 2.5296e-26 1.0000e+00 hypermethylated 6.2454e-11 1.0000e+00 hypermethylated 7.8067e-09 1.00000 hypermethylated 0.5502636 2.0457e-05 hypermethylated 9.7416e-04 hypermethylated 0.825295 0.6728538 0.16727906 7 0.8317325 0.6597198 1.7201e-01 8.7775e-07 9.9995e-01 weaklyHypermeth 3.9898e-05 1.0000000 weaklyHypermeth 5.1936e-05 0.99996090 weaklyHypermeth 3.7097e-03 1.00000 weaklyHypermeth 0.0772566 2.0458e-01 insignificant 1.00000000 insignificant 0.202685 0.6728538 -4.3477e-01 7 0.223729 0.6597198 -0.4359906 1.0000e+00 2.1975e-14 hypomethylated 1.00000000 2.1572e-12 hypomethylated 1.00000000 1.0175e-07 hypomethylated 1.00000 1.0332e-05 hypomethylated -0.47300699 1.0980e-04 hypomethylated 0.0073203 hypomethylated chr17 8994853 8995853 140822 ENSG00000216007 0.8596600 244 12 0.817909 322 12 0.8754297 355 12 0.9155929 136 8 0.9236937 259 12 0.6526007 265 11 0.816208 406 12 0.7495588 245 12 0.8299995 304 12 0.8855415 261 12 0.913882 421 12 0.791533 325 12 0.695639 371 12 NA 0 0 0.718908 302 12 0.8220857 265 12 0.7162179 282 12 0.843708 168 8 0.890960 452 12 0.706489 218 11 0.9219381 170 12 0.844348 57 5 0.767816 261 12 0.8833367 174 12 0.750152 62 5 0.6564311 399 12 0.8430585 193 11 0.8497052 158 12 0.7690825 314 12 0.7441691 382 12 0.8891412 461 12 0.943040 380 12 0.381130 388 12 0.8096637 306 12 0.7000000 155 5 0.652024 79 6 0.6641249 198 12 0.530307 415 12 0.6128896 230 11 0.6088891 305 12 0.6215831 121 6 0.5503648 277 8 0.719168 204 10 0.845295 0.868438 0.9234119 0.908476 0.9659731 0.735169 0.869674 0.8067889 0.8972355 0.911204 0.9220271 0.881796 0.6738141 NA 0.7635693 0.8945074 0.8193906 0.840237 0.902242 0.7691017 0.900767 0.846517 0.756696 0.9219624 0.7818994 0.6171203 0.899511 0.8935204 0.8637313 0.72638729 0.8751610 0.942092 0.2861139 0.7367921 0.5883012 5.6566e-01 0.706873 0.2746569 0.6337324 0.6875352 0.6475016 0.6838116 0.692216 5 0.807713 0.844238 -1.9647e-02 12 0.801367 0.7867835 0.01458382 9.5091e-01 1.5354e-01 insignificant 1.0000000 1.000000 insignificant 9.2155e-01 3.4090e-01 insignificant 1.000000 1.0000000 insignificant -0.00997687 0.7509034 insignificant 1 insignificant 0.807679 0.624675 0.1825459 12 0.786088 0.568075 0.21801258 1.7752e-19 6.0849e-01 weaklyHypermeth 5.0720e-18 1.0000e+00 weaklyHypermeth 3.0982e-06 4.6144e-01 weaklyHypermeth 8.3940e-05 1.0000000 weaklyHypermeth 0.1889997 2.4778e-02 weaklyHypermeth 3.0973e-01 insignificant 0.807788 0.6816183 0.1601363 9 0.809929 0.6177409 0.1921876 4.5414e-20 1.00000000 weaklyHypermeth 1.5138e-17 1.000000 weaklyHypermeth 5.9858e-12 1.00000000 weaklyHypermeth 1.9953e-09 1.000000 weaklyHypermeth 0.1892957 3.7407e-04 weaklyHypermeth 3.4006e-02 weaklyHypermeth 0.844186 0.624675 0.2076367 12 0.7703822 0.568075 0.2023069 6.0105e-11 9.9147e-01 hypermethylated 1.2266e-09 1.0000e+00 hypermethylated 3.2621e-04 9.4123e-01 hypermethylated 5.9312e-03 1.00000 hypermethylated 0.1989765 1.9908e-02 weaklyHypermeth 2.6544e-01 insignificant 0.844467 0.6816183 0.16160458 9 0.8345808 0.6177409 2.1684e-01 3.3905e-17 1.0000e+00 weaklyHypermeth 1.1302e-14 1.0000000 weaklyHypermeth 1.0652e-08 0.99999999 weaklyHypermeth 3.0763e-06 1.00000 weaklyHypermeth 0.1992726 2.3377e-04 weaklyHypermeth 0.02943315 weaklyHypermeth 0.625488 0.6816183 -1.3315e-01 9 0.615415 0.6177409 -0.0023260 5.5348e-04 2.4368e-02 weaklyHypometh 0.09224710 2.2563e-01 weaklyHypometh 0.02128478 3.4867e-01 inconclusive 1.00000 1.0000e+00 insignificant 0.00029603 9.9657e-01 insignificant 1.0000000 insignificant chr17 9049849 9050849 140824 ENSG00000216007 0.8885298 127 5 0.570227 139 5 0.8507190 132 5 0.6771465 101 5 0.5478992 71 4 0.7577896 141 5 0.686735 63 5 0.5783314 92 5 0.8116606 51 4 0.7039026 76 4 0.644728 149 5 0.666667 32 4 0.650109 102 5 0.677489 55 4 0.490028 66 4 0.8000000 27 3 0.7777778 27 1 0.469444 83 5 0.697410 263 5 0.635934 120 6 0.7002165 33 2 0.355556 47 4 0.759693 79 6 0.6856620 65 5 0.725275 49 4 0.7472946 131 5 0.6432133 173 5 0.6547619 26 1 0.6648982 166 5 0.6739316 114 5 0.7284197 215 5 0.917659 138 5 0.586937 64 2 0.2248316 116 5 0.1041667 92 6 0.450000 17 0 0.3162812 70 6 0.288452 232 5 0.5282919 135 6 0.4936328 171 6 0.4222527 93 5 0.7769928 62 5 0.430300 118 5 0.845476 0.531250 0.7946237 0.648237 0.6674208 0.763390 0.849977 0.6520643 0.8510496 0.801234 0.8496108 0.730769 0.7013981 0.7206543 0.6761177 0.9755312 0.9001982 0.457532 0.802927 0.5229504 0.860213 0.325321 0.778260 0.6924803 0.7827557 0.7288321 0.718151 0.8317308 0.6898019 0.58752465 0.6043660 0.899554 0.5956530 0.3118681 0.0300481 5.1442e-01 0.397559 0.2914245 0.4065500 0.3297276 0.2597475 0.7680156 0.301511 1 0.791341 0.781553 2.2082e-02 5 0.619177 0.6085491 0.01062744 4.9277e-01 3.8750e-01 insignificant 1.0000000 1.000000 insignificant 9.5110e-01 5.8437e-01 insignificant 1.000000 1.0000000 insignificant -0.00892190 0.8438281 lowCoverage 1 lowCoverage 0.791645 0.287648 0.5006849 5 0.653227 0.252417 0.40080960 2.8553e-27 1.0000e+00 hypermethylated 1.2979e-25 1.0000e+00 hypermethylated 6.8650e-08 1.0000e+00 hypermethylated 2.8914e-06 1.0000000 hypermethylated 0.3506817 2.6643e-03 lowCoverage 6.0553e-02 lowCoverage 0.798001 0.6148532 0.2550312 5 0.796084 0.5995801 0.1965040 4.1295e-12 0.99924145 hypermethylated 4.5884e-10 1.000000 hypermethylated 7.1929e-06 0.99957706 hypermethylated 6.7257e-04 1.000000 hypermethylated 0.1488325 8.2267e-02 lowCoverage 1.0000e+00 lowCoverage 0.781478 0.287648 0.4928746 5 0.6395631 0.252417 0.3871457 4.6462e-17 1.0000e+00 hypermethylated 1.4988e-15 1.0000e+00 hypermethylated 5.7624e-07 1.0000e+00 hypermethylated 2.4010e-05 1.00000 hypermethylated 0.3596036 1.8480e-03 lowCoverage 4.2685e-02 lowCoverage 0.785191 0.6148532 0.22627377 5 0.7586107 0.5995801 1.5903e-01 1.0637e-07 9.8518e-01 hypermethylated 5.5983e-06 1.0000000 hypermethylated 4.9016e-05 0.99952314 hypermethylated 3.7097e-03 1.00000 hypermethylated 0.1577544 7.3446e-02 lowCoverage 1.00000000 lowCoverage 0.288136 0.6135182 -2.7578e-01 5 0.294487 0.5328434 -0.2383565 8.5804e-01 1.5030e-05 hypomethylated 1.00000000 3.5786e-04 hypomethylated 0.89003495 3.9916e-03 weaklyHypometh 1.00000 7.6761e-02 weaklyHypometh -0.20184929 6.2390e-02 lowCoverage 0.7254626 lowCoverage chr17 9056688 9057688 140825 ENSG00000216007 0.9092653 261 6 0.664241 150 4 0.7953836 108 6 0.9190247 219 5 0.9056122 51 4 0.8360390 38 2 0.761654 93 5 0.9108515 134 5 0.8281955 61 3 0.9524812 91 6 0.929483 223 7 0.776933 54 5 0.970746 113 4 1.000000 16 2 0.828690 88 4 0.2870370 37 3 0.8021978 32 3 0.958464 413 6 0.956310 468 6 0.938095 55 4 0.8645833 29 4 0.666667 8 1 0.733999 84 7 0.7058824 38 4 0.603636 27 2 0.9601504 159 6 0.9121212 31 3 0.3928571 20 1 0.9646384 157 6 0.9211527 195 7 0.9219251 310 7 0.849665 108 7 0.299968 214 7 0.2180396 222 7 0.5066322 172 7 0.800000 25 4 0.4689935 67 6 0.330922 194 7 0.8329335 124 4 0.9521230 155 4 0.8620690 123 4 0.8084532 345 4 0.828986 112 6 0.881488 0.926125 0.7807083 0.828012 0.7356151 0.729798 0.889766 0.9251914 0.9943713 0.927427 0.9232050 0.711520 0.9452834 0.9922766 0.8801389 0.4783951 0.9765301 0.901717 0.945485 0.9039683 0.655911 0.542286 0.859649 0.9199346 0.2308198 0.9261209 0.833521 0.7670223 0.9325985 0.91537468 0.9181672 0.968899 0.2847197 0.0877529 0.1326873 2.2535e-01 0.515452 0.2596722 0.9452862 0.9696637 0.9980843 0.7488988 0.813148 1 0.893900 0.924334 -3.4469e-02 6 0.776807 0.6815728 0.09523418 9.8853e-01 1.7358e-01 insignificant 1.0000000 1.000000 insignificant 9.4682e-01 1.8270e-01 insignificant 1.000000 1.0000000 insignificant 0.05509534 0.3803675 lowCoverage 1 lowCoverage 0.894152 0.350168 0.5573067 6 0.783509 0.314879 0.46862941 1.4254e-33 1.0000e+00 hypermethylated 1.0965e-31 1.0000e+00 hypermethylated 2.6279e-08 1.0000e+00 hypermethylated 1.2514e-06 1.0000000 hypermethylated 0.4091093 3.1438e-03 lowCoverage 6.8343e-02 lowCoverage 0.894192 0.9185099 -0.0069823 4 0.846009 0.7850758 0.0609329 6.4366e-01 0.54326055 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5786e-01 0.27286134 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0103776 8.1327e-01 lowCoverage 1.0000e+00 lowCoverage 0.924334 0.349384 0.5657732 7 0.7573031 0.279893 0.4774104 1.4637e-22 1.0000e+00 hypermethylated 7.7035e-21 1.0000e+00 hypermethylated 1.6808e-07 1.0000e+00 hypermethylated 7.3078e-06 1.00000 hypermethylated 0.3540140 6.2152e-03 lowCoverage 1.0440e-01 lowCoverage 0.926661 0.9185099 0.02294266 4 0.8102993 0.7850758 2.5224e-02 1.5955e-01 9.0863e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.7805e-01 0.76478433 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0654730 2.6450e-01 lowCoverage 1.00000000 lowCoverage 0.350562 0.9195804 -6.1431e-01 4 0.359862 0.8972294 -0.5373674 1.0000e+00 3.6060e-12 lowCoverage 1.00000000 2.0033e-10 lowCoverage 0.99999932 2.1425e-05 lowCoverage 1.00000 1.3391e-03 lowCoverage -0.41948692 3.3750e-03 lowCoverage 0.0946516 lowCoverage chr17 9088209 9089209 140828 ENSG00000216007 0.8449761 205 7 0.814789 259 7 0.8434066 116 7 0.9070113 310 7 0.9084416 75 7 0.8659839 356 7 0.910204 95 7 0.8934498 109 4 0.9285714 95 7 0.8866071 55 2 0.905881 242 7 0.984127 40 2 0.918756 98 2 0.901154 72 2 0.949000 108 4 0.9545455 37 4 1.0000000 2 0 0.913189 208 5 0.891249 178 7 0.899764 225 5 0.8797306 56 6 0.947861 30 2 0.925170 90 7 0.8135436 63 4 0.947279 106 7 0.9290420 192 7 0.8980623 83 7 0.9861472 70 2 0.9859694 70 2 0.8455118 195 7 0.9337211 250 7 0.957226 247 7 0.209568 180 7 0.1351741 90 7 0.1666667 344 6 0.375000 25 3 0.2220291 249 7 0.483206 190 7 0.9546721 254 7 0.8886272 230 7 0.8359690 321 7 0.9899749 91 2 0.855887 261 7 0.879180 0.848980 0.8601311 0.916643 0.9086124 0.880101 0.859291 0.8943345 0.8561789 0.879511 0.9132772 0.949875 0.9522167 0.8896104 0.9475390 0.9055777 NA 0.916599 0.883787 0.9006150 0.907871 0.922112 0.937701 0.8939882 0.9248120 0.9172718 0.851186 0.9727956 0.9712003 0.85089528 0.9318856 0.938275 0.2882784 0.1701523 0.2214425 4.0941e-01 0.340664 0.5966988 0.9372128 0.8400879 0.8529278 0.9683419 0.898138 2 0.906412 0.923237 -2.0293e-02 7 0.897979 0.9229871 -0.02500843 9.9660e-01 8.2254e-02 insignificant 1.0000000 1.000000 insignificant 9.7352e-01 8.4889e-02 insignificant 1.000000 1.0000000 insignificant -0.01471671 0.4305730 insignificant 1 insignificant 0.906412 0.258813 0.6209882 7 0.897979 0.297504 0.60047511 3.0057e-71 1.0000e+00 hypermethylated 1.5029e-68 1.0000e+00 hypermethylated 7.1910e-14 1.0000e+00 hypermethylated 1.3629e-11 1.0000000 hypermethylated 0.6407814 5.9092e-05 hypermethylated 2.3637e-03 hypermethylated 0.906412 0.8893691 0.0135355 7 0.897979 0.8846620 0.0133166 1.6709e-01 0.86443478 insignificant 1.0000e+00 1.000000 insignificant 3.7575e-01 0.81017545 insignificant 1.0000e+00 1.000000 insignificant 0.0010292 9.7476e-01 insignificant 1.0000e+00 insignificant 0.923237 0.258813 0.5961924 7 0.9229871 0.297504 0.6254835 7.8918e-51 1.0000e+00 hypermethylated 2.6306e-48 1.0000e+00 hypermethylated 8.8305e-12 1.0000e+00 hypermethylated 1.4718e-09 1.00000 hypermethylated 0.6554981 3.4120e-05 hypermethylated 1.4217e-03 hypermethylated 0.923237 0.8893691 0.03316215 7 0.9229871 0.8846620 3.8325e-02 2.2471e-02 9.7009e-01 weaklyHypermeth 3.6244e-01 1.0000000 insignificant 7.2633e-02 0.97186840 insignificant 1.0000e+00 1.00000 insignificant 0.0157459 6.4959e-01 insignificant 1.00000000 insignificant 0.258813 0.8893691 -6.5095e-01 7 0.297504 0.8846620 -0.5871585 1.0000e+00 5.9629e-30 hypomethylated 1.00000000 2.9815e-27 hypomethylated 0.99999999 8.6861e-08 hypomethylated 1.00000 1.0332e-05 hypomethylated -0.63975218 1.1507e-05 hypomethylated 0.0014784 hypomethylated chr17 10065732 10066732 140858 GAS7 ENSG00000007237 0.6980769 139 5 0.638035 143 5 0.6066667 38 5 0.6533333 94 5 0.6651282 55 5 0.7136996 115 5 0.482222 48 5 0.5854762 65 5 0.6569697 43 5 0.6666667 15 0 0.625705 110 5 0.400000 15 0 0.754359 71 5 0.728409 64 5 0.826190 50 5 0.6000000 15 3 1.0000000 4 0 0.581102 136 5 0.675000 40 5 0.571266 96 5 0.8500000 21 1 0.800000 5 0 0.600000 57 3 0.7142857 20 2 0.710440 57 5 0.6398810 92 5 0.7059524 24 2 0.4666667 12 0 0.6508282 73 3 0.6388766 78 5 0.6963621 79 5 0.676471 65 5 0.529398 84 5 0.5287879 47 5 0.6734324 75 5 0.600000 10 0 0.6028175 63 5 0.562857 92 5 0.6726437 99 5 0.6571429 94 5 0.6268966 107 5 0.4141667 48 3 0.706522 93 5 0.694987 0.635938 0.6147541 0.644809 0.6599412 0.713565 0.469035 0.5967018 0.6662196 0.666667 0.6150844 0.382514 0.7479433 0.7214978 0.8315769 0.6512337 0.7374462 0.582151 0.676230 0.5800600 0.852459 0.836066 0.612022 0.7166276 0.6846514 0.6464188 0.704333 0.5000000 0.6633914 0.63725249 0.6948203 0.673939 0.5270376 0.5478142 0.6752149 5.9016e-01 0.593498 0.5547649 0.6762012 0.6522248 0.6308649 0.4655055 0.693870 0 0.647493 0.674099 -2.1245e-02 5 0.654820 0.6732571 -0.01843736 8.2589e-01 1.4638e-01 insignificant 1.0000000 1.000000 insignificant 9.2933e-01 3.2439e-02 weaklyHypometh 1.000000 1.0000000 insignificant -0.02273163 0.5663745 lowCoverage 1 lowCoverage 0.647493 0.598383 0.0593343 5 0.654820 0.594717 0.06010299 1.5316e-02 9.4917e-01 weaklyHypermeth 1.1692e-01 1.0000e+00 insignificant 1.1089e-02 7.9857e-01 weaklyHypermeth 1.2186e-01 1.0000000 insignificant 0.0735331 5.1755e-02 lowCoverage 5.5651e-01 lowCoverage 0.647493 0.6621315 -0.0234006 5 0.654820 0.6732724 -0.0184527 8.4910e-01 0.22594290 insignificant 1.0000e+00 1.000000 insignificant 3.9073e-01 0.41597798 insignificant 1.0000e+00 1.000000 insignificant 0.0409410 5.1044e-01 lowCoverage 1.0000e+00 lowCoverage 0.674099 0.598383 0.0787543 5 0.6732571 0.594717 0.0785404 2.0752e-02 9.9709e-01 weaklyHypermeth 1.5486e-01 1.0000e+00 insignificant 1.0035e-02 9.9271e-01 weaklyHypermeth 1.0908e-01 1.00000 insignificant 0.0962647 1.6334e-02 lowCoverage 2.2686e-01 lowCoverage 0.674099 0.6621315 0.00078893 5 0.6732571 0.6732724 -1.5326e-05 5.7685e-01 6.6102e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.4796e-01 0.98824629 insignificant 1.0000e+00 1.00000 insignificant 0.0636726 3.1877e-01 lowCoverage 1.00000000 lowCoverage 0.598383 0.6621315 -7.7233e-02 5 0.594717 0.6732724 -0.0785557 9.9244e-01 2.1828e-02 weaklyHypometh 1.00000000 2.0593e-01 insignificant 0.91727962 1.0590e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03259214 5.8739e-01 lowCoverage 1.0000000 lowCoverage chr17 14860040 14861040 141107 ENSG00000218780 0.846471 257 5 0.762993 102 5 0.667734 85 5 0.878063 143 5 0.900171 48 5 0.859454 193 5 0.863143 87 5 0.830860 66 4 0.680456 70 4 0.905336 71 5 0.79016 130 5 0.7136364 35 3 0.8835730 96 5 0.800000 10 2 0.868748 104 5 0.8486364 49 4 0.7781031 52 4 0.88946 124 5 0.805514 141 5 0.84648 185 5 0.91364 51 3 0.829870 54 4 0.797680 130 5 0.838384 39 3 0.83462 36 3 0.819604 127 5 0.624325 64 3 0.908666 43 3 0.776208 83 3 0.805136 118 5 0.810876 107 4 0.89013 186 5 0.695259 79 4 0.6873568 87 5 0.8057087 106 5 0.858333 51 4 0.820889 55 3 0.68286 132 5 0.854893 208 5 0.904657 164 5 0.860415 151 5 0.859814 173 5 0.874516 191 5 0.863269 0.740049 0.739041 0.889667 0.884392 0.886046 0.876244 0.876379 0.774424 0.876976 0.876794 0.873106 0.930618 0.862652 0.926876 0.8277192 0.820579 0.915721 0.864083 0.860306 0.877119 0.821815 0.837927 0.825293 0.879808 0.874039 0.783044 0.879228 0.860320 0.867022 0.867321 0.929261 0.695414 0.7202438 0.80221105 0.8670309 0.851605 0.768713 0.895577 0.917334 0.896854 0.890821 0.911872 3 0.844727 0.852601 -0.00234139 5 0.805456 0.773252 0.0322040 0.6721635 0.50834575 insignificant 1 1.000000 insignificant 0.757153 0.29745095 insignificant 1 1.00000 insignificant 0.00018876 0.994480 lowCoverage 1 lowCoverage 0.844794 0.7725490 0.0750669 5 0.822063 0.75153 0.0705351 1.2836e-03 0.9986830 weaklyHypermeth 1.6046e-02 1 weaklyHypermeth 1.4611e-02 0.997640 weaklyHypermeth 2.2138e-01 1 insignificant 0.0625492 1.2028e-01 lowCoverage 1.0000e+00 lowCoverage 0.845250 0.888388 -0.04259026 5 0.851719 0.884726 -0.0330069 9.9269e-01 0.06559643 insignificant 1.0000e+00 1.00000 insignificant 9.8806e-01 6.5790e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0499091 1.1807e-02 lowCoverage 0.5838281 lowCoverage 0.853140 0.7725490 0.0807745 5 0.837204 0.7515282 0.0856754 2.0056e-03 0.9994670 weaklyHypermeth 2.5713e-02 1 weaklyHypermeth 7.6606e-03 0.99317 weaklyHypermeth 1.2693e-01 1 insignificant 6.2360e-02 1.4007e-01 lowCoverage 1.0000e+00 lowCoverage 0.853282 0.888388 -3.7551e-02 5 0.864336 0.884726 -0.0203899 9.8510e-01 0.1320838 insignificant 1.0000e+00 1.00000 insignificant 9.5372e-01 0.11204318 insignificant 1.0000e+00 1.00000 insignificant -0.0500979 5.2852e-02 lowCoverage 1.000000 lowCoverage 0.7725490 0.888009 -0.1189035 5 0.75153 0.861672 -0.1101433 9.9986e-01 4.0795e-04 weaklyHypometh 1.0000e+00 1.0460e-02 weaklyHypometh 0.99991493 8.2111e-04 weaklyHypometh 1.00000 3.4213e-02 weaklyHypometh -0.11245837 1.5837e-02 lowCoverage 0.42802757 lowCoverage chr17 16689163 16690163 141159 KRT17 ENSG00000128422 0.850929 330 7 0.788123 138 8 0.882211 129 8 0.970724 229 7 0.795238 101 8 0.857822 291 11 0.749725 87 8 0.801955 215 9 0.923620 97 9 0.919135 166 9 0.91704 201 10 0.9335664 45 4 0.9906640 250 9 0.946120 105 6 0.897436 112 8 0.8166667 58 7 NA 0 0 0.94589 502 6 0.915886 375 8 0.95694 208 7 0.94238 69 8 0.883862 61 6 0.907173 120 8 0.913619 69 3 0.97017 109 7 0.793583 144 8 0.901782 156 11 0.777171 70 7 0.906958 199 9 0.879070 121 8 0.927104 135 8 0.88249 176 7 0.569641 123 9 0.7990620 188 6 0.6990643 110 8 0.927417 148 5 0.528208 132 8 0.71165 175 9 0.933681 219 7 0.957569 197 7 0.840756 198 7 0.877808 456 8 0.883333 142 8 0.911576 0.691695 0.851643 0.941281 0.897110 0.908727 0.855728 0.877668 0.878340 0.875055 0.912593 0.872657 0.993073 0.957824 0.896146 0.9181118 NA 0.904122 0.918324 0.959620 0.929507 0.908157 0.904082 0.817676 0.972135 0.842544 0.916506 0.893698 0.862151 0.858924 0.885080 0.945723 0.779897 0.8046266 0.54924112 0.9273689 0.602054 0.644562 0.875313 0.908090 0.884174 0.935048 0.866378 2 0.896315 0.896213 -0.00064420 8 0.881984 0.916855 -0.0348710 0.9347950 0.30263468 insignificant 1 1.000000 insignificant 0.932538 0.64036574 insignificant 1 1.00000 insignificant -0.00309410 0.892408 insignificant 1 insignificant 0.896315 0.7054795 0.1986288 8 0.881984 0.69450 0.1874889 1.8040e-21 0.9999580 weaklyHypermeth 1.6400e-19 1 weaklyHypermeth 8.4837e-07 0.999957 weaklyHypermeth 4.4651e-05 1 weaklyHypermeth 0.1815123 2.7986e-02 weaklyHypermeth 4.9975e-01 insignificant 0.894722 0.891825 -0.00152291 7 0.876627 0.865120 0.0115068 8.9787e-01 0.28678753 insignificant 1.0000e+00 1.00000 insignificant 7.7027e-01 6.4291e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0112770 6.7775e-01 insignificant 1.0000000 insignificant 0.896213 0.7054795 0.1981162 8 0.916855 0.6944952 0.2223599 1.5825e-12 1.0000000 weaklyHypermeth 7.5358e-11 1 weaklyHypermeth 3.1317e-05 1.00000 weaklyHypermeth 1.0799e-03 1 weaklyHypermeth 1.8461e-01 2.6301e-02 weaklyHypermeth 4.7820e-01 insignificant 0.895554 0.891825 -9.0331e-03 7 0.910916 0.865120 0.0457964 9.4440e-01 0.6828429 insignificant 1.0000e+00 1.00000 insignificant 8.6983e-01 0.87029696 insignificant 1.0000e+00 1.00000 insignificant -0.0081829 7.6318e-01 insignificant 1.000000 insignificant 0.7096400 0.891736 -0.1996608 7 0.69145 0.854744 -0.1632938 1.0000e+00 2.2056e-06 weaklyHypometh 1.0000e+00 8.4052e-05 weaklyHypometh 0.99979756 1.5792e-04 weaklyHypometh 1.00000 9.8701e-03 weaklyHypometh -0.19278928 2.2156e-02 weaklyHypometh 0.48165628 insignificant chr17 16689514 16690514 141160 KRT17 ENSG00000128422 0.830096 344 7 0.773009 108 7 0.871832 128 8 0.954057 230 7 0.783333 103 8 0.850127 328 11 0.728571 75 7 0.780764 201 9 0.908469 104 9 0.896699 170 9 0.90345 193 10 0.8951049 50 5 0.9865079 258 9 0.928263 107 6 0.901832 120 8 0.7916667 48 5 1.0000000 1 0 0.94768 525 7 0.919352 329 7 0.93333 232 7 0.90810 70 8 0.858730 86 8 0.916672 120 8 0.920762 80 4 0.91739 100 7 0.778388 148 8 0.839282 144 10 0.741457 81 7 0.843466 183 9 0.876633 144 8 0.917221 160 8 0.88868 213 7 0.491009 139 9 0.7291320 198 7 0.6930780 108 7 0.852686 119 3 0.462885 111 8 0.62589 173 9 0.936458 211 6 0.959950 202 6 0.851173 187 5 0.877808 456 9 0.832738 150 8 0.893882 0.682244 0.825986 0.913138 0.870348 0.899273 0.826585 0.860012 0.865299 0.859721 0.905486 0.849507 0.991328 0.933764 0.903798 0.8824131 NA 0.900431 0.915282 0.930047 0.901519 0.886836 0.916474 0.819637 0.946652 0.828558 0.865372 0.856502 0.823019 0.854709 0.876802 0.952128 0.675006 0.6982563 0.50298180 0.8406744 0.519456 0.541201 0.869197 0.906541 0.888571 0.931063 0.839191 2 0.887154 0.882045 0.00090468 8 0.872314 0.904580 -0.0322662 0.8546231 0.37486138 insignificant 1 1.000000 insignificant 0.809926 0.72325980 insignificant 1 1.00000 insignificant 0.01197558 0.621108 insignificant 1 insignificant 0.887154 0.6261792 0.2625441 8 0.872314 0.63340 0.2389157 1.3044e-33 1.0000000 hypermethylated 3.2610e-31 1 hypermethylated 1.3860e-09 1.000000 hypermethylated 1.9800e-07 1 hypermethylated 0.2367604 9.8700e-03 weaklyHypermeth 2.2432e-01 insignificant 0.885329 0.888797 -0.00293438 6 0.866266 0.854510 0.0117556 9.0437e-01 0.25460322 insignificant 1.0000e+00 1.00000 insignificant 8.6033e-01 3.6393e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0124183 6.8724e-01 insignificant 1.0000000 insignificant 0.882045 0.6261792 0.2633611 8 0.904580 0.6333983 0.2711819 4.6765e-21 1.0000000 hypermethylated 9.1849e-19 1 hypermethylated 3.2318e-07 1.00000 hypermethylated 2.6932e-05 1 hypermethylated 2.2478e-01 1.2356e-02 weaklyHypermeth 2.8550e-01 insignificant 0.881345 0.888797 -1.0737e-02 6 0.897764 0.854510 0.0432543 9.7782e-01 0.6190200 insignificant 1.0000e+00 1.00000 insignificant 9.4134e-01 0.43834023 insignificant 1.0000e+00 1.00000 insignificant -0.0243939 4.3557e-01 insignificant 1.000000 insignificant 0.6290516 0.888704 -0.2579639 6 0.62095 0.843319 -0.2223645 1.0000e+00 6.3463e-11 hypomethylated 1.0000e+00 1.2693e-08 hypomethylated 0.99999942 1.5267e-06 hypomethylated 1.00000 3.8168e-04 hypomethylated -0.24917873 7.4212e-03 weaklyHypometh 0.26504128 insignificant chr17 17036122 17037122 141170 ENSG00000209051 0.648357 210 5 0.253066 59 4 0.433333 23 3 0.622869 138 5 0.388182 34 3 0.688672 50 3 0.390476 41 5 0.473333 32 3 0.421429 21 1 0.533333 17 1 0.48734 101 5 0.6500000 10 0 0.8100000 32 5 0.578929 46 5 0.547619 30 3 0.4000000 11 1 0.7500000 4 0 0.59120 144 5 0.333333 37 3 0.57381 30 3 0.53333 15 3 0.800000 6 0 0.587302 113 5 0.247619 26 3 0.56000 34 3 0.547619 72 3 0.208333 10 1 0.500000 8 0 0.427071 53 5 0.501818 52 5 0.484615 43 3 0.60000 48 5 0.484578 68 5 0.3685714 49 5 0.6000000 48 3 0.500000 8 0 0.411429 31 3 0.38462 45 3 0.742657 168 5 0.760331 153 5 0.708880 165 5 0.712802 164 5 0.704152 165 5 0.760391 0.495461 0.575397 0.706590 0.400108 0.686328 0.577853 0.607143 0.583333 0.698413 0.622197 0.589712 0.880952 0.695942 0.726190 0.6190476 0.671192 0.746347 0.452381 0.623102 0.673425 0.880952 0.682099 0.366667 0.714286 0.718254 0.431538 0.488095 0.481962 0.649784 0.640110 0.682540 0.554982 0.4860544 0.58276644 0.6107710 0.523469 0.463370 0.799867 0.843443 0.790903 0.775618 0.789576 0 0.601869 0.622642 0.01589909 5 0.526156 0.438686 0.0874701 0.3533278 0.75982652 insignificant 1 1.000000 insignificant 0.553247 0.91165638 insignificant 1 1.00000 insignificant 0.02895497 0.606985 lowCoverage 1 lowCoverage 0.602079 0.5502008 0.1219364 3 0.577564 0.44906 0.1285000 1.1185e-04 0.9798358 lowCoverage 1.6210e-03 1 lowCoverage 5.7613e-02 0.982599 lowCoverage 6.4014e-01 1 lowCoverage 0.0705653 1.6437e-01 lowCoverage 1.0000e+00 lowCoverage 0.602079 0.699387 -0.13047358 5 0.577564 0.716408 -0.1388442 9.9978e-01 0.00035432 weaklyHypometh 1.0000e+00 0.17716 insignificant 9.9984e-01 5.8853e-05 weaklyHypometh 1.0000e+00 0.058853 weaklyHypometh -0.1970003 7.7870e-06 lowCoverage 0.0025957 lowCoverage 0.630901 0.5502008 0.1281547 3 0.568564 0.4490641 0.1195001 9.3887e-03 0.9990453 lowCoverage 1.0095e-01 1 lowCoverage 1.0478e-01 0.98157 lowCoverage 1.0000e+00 1 lowCoverage 4.1610e-02 4.8023e-01 lowCoverage 1.0000e+00 lowCoverage 0.630901 0.699387 -1.3194e-01 5 0.568564 0.716408 -0.1478440 9.9649e-01 0.0027201 weaklyHypometh 1.0000e+00 0.54401 insignificant 9.9873e-01 0.00087029 weaklyHypometh 1.0000e+00 0.87029 insignificant -0.2259553 3.6887e-04 lowCoverage 0.092217 lowCoverage 0.5502008 0.699387 -0.2279992 3 0.44906 0.716408 -0.2673442 1.0000e+00 7.4775e-08 lowCoverage 1.0000e+00 4.6734e-06 lowCoverage 0.99999994 1.4580e-05 lowCoverage 1.00000 1.4580e-03 lowCoverage -0.26756563 3.9451e-04 lowCoverage 0.03945117 lowCoverage chr17 17613917 17614917 141180 RAI1 ENSG00000108557 0.727471 410 8 0.800082 308 11 0.858472 181 10 0.862110 416 8 0.740070 105 8 0.928561 570 10 0.845571 85 6 0.937603 259 12 0.937409 138 9 0.862722 241 10 0.84695 436 14 0.8126984 62 6 0.6898416 307 11 0.910693 179 10 0.915550 218 9 0.8511905 54 4 0.6333333 8 0 0.59358 826 9 0.738361 709 9 0.85228 393 9 0.77984 174 10 0.673383 200 8 0.765065 273 8 0.662403 140 8 0.54071 247 8 0.813187 381 13 0.771984 312 10 0.375163 63 6 0.891792 339 9 0.926423 386 13 0.901931 688 11 0.83373 463 9 0.746296 205 10 0.8012601 439 8 0.7789905 614 13 0.782895 107 5 0.675327 135 11 0.75835 474 9 0.525070 227 8 0.317126 260 8 0.338093 289 8 0.485252 502 8 0.695691 169 8 0.840227 0.813048 0.739704 0.821231 0.787827 0.884086 0.846954 0.902616 0.874301 0.921726 0.894659 0.667917 0.870688 0.911049 0.895028 0.6237413 0.879517 0.792552 0.895695 0.828926 0.888955 0.658246 0.797985 0.880745 0.819399 0.829789 0.856386 0.642569 0.895200 0.924488 0.868185 0.891692 0.571482 0.7363486 0.75317864 0.8172958 0.663580 0.615277 0.496411 0.411231 0.352786 0.385921 0.555216 4 0.846883 0.843699 -0.00081464 8 0.661883 0.576371 0.0855118 0.4612613 0.99783870 insignificant 1 1.000000 insignificant 0.169371 0.99940371 insignificant 1 1.00000 insignificant 0.07259227 0.177808 insignificant 1 insignificant 0.847288 0.6869301 0.1528259 8 0.677301 0.67592 0.0013761 7.7365e-07 0.9194481 weaklyHypermeth 1.3892e-05 1 weaklyHypermeth 7.1491e-02 0.984648 insignificant 7.6872e-01 1 insignificant 0.0600411 5.0438e-02 insignificant 8.1351e-01 insignificant 0.847270 0.408431 0.43568307 8 0.708485 0.509975 0.1985098 2.2980e-44 0.99989708 hypermethylated 2.2980e-41 1.00000 hypermethylated 4.4849e-13 9.9919e-01 hypermethylated 4.4849e-10 1.000000 hypermethylated 0.3449809 5.3878e-03 weaklyHypermeth 0.3848464 insignificant 0.844390 0.6869301 0.1625933 8 0.631264 0.6759247 -0.0446607 1.8655e-03 0.8733285 weaklyHypermeth 2.4228e-02 1 weaklyHypermeth 6.0729e-01 0.71060 insignificant 1.0000e+00 1 insignificant -1.2551e-02 8.0488e-01 insignificant 1.0000e+00 insignificant 0.844823 0.408431 4.3703e-01 8 0.668573 0.509975 0.1585984 5.3179e-25 0.9999556 hypermethylated 5.3179e-22 1.00000 hypermethylated 1.6292e-08 0.99959879 hypermethylated 1.6292e-05 1.00000 hypermethylated 0.2723887 1.1475e-02 weaklyHypermeth 0.819634 insignificant 0.6868327 0.408431 0.2559465 8 0.64413 0.509975 0.1341593 1.3951e-07 1.0000e+00 hypermethylated 6.9753e-05 1.0000e+00 hypermethylated 0.00015377 9.9996e-01 hypermethylated 0.15377 1.0000e+00 insignificant 0.28493987 1.2455e-02 weaklyHypermeth 0.37743148 insignificant chr17 17657430 17658430 141181 MIR33B ENSG00000207839 0.950414 644 15 0.790564 275 16 0.902997 361 17 0.871899 585 22 0.788825 220 20 0.766243 597 22 0.841073 289 18 0.817743 306 12 0.824861 371 18 0.869800 428 20 0.84524 486 17 0.7291819 159 16 0.7516112 432 17 0.893096 195 9 0.868481 353 20 0.7874842 161 14 0.5320574 73 6 0.89873 692 21 0.836498 496 20 0.78265 460 21 0.63747 217 16 0.717179 316 15 0.793499 385 18 0.693730 183 14 0.84378 338 15 0.873184 339 15 0.688368 398 19 0.718003 222 21 0.805328 371 20 0.856996 381 15 0.887402 399 15 0.87432 582 20 0.895611 230 15 0.8605487 324 17 0.7965903 428 15 0.648257 221 10 0.657534 324 23 0.83617 397 19 0.772278 497 20 0.806395 581 23 0.832732 431 14 0.850403 578 24 0.861863 571 19 0.941247 0.862734 0.912322 0.940368 0.921950 0.911025 0.903325 0.914381 0.892172 0.885786 0.920972 0.832769 0.951660 0.924733 0.917488 0.9024061 0.758190 0.928343 0.933168 0.938953 0.898366 0.915172 0.914281 0.896450 0.965960 0.900206 0.924809 0.900946 0.917052 0.949491 0.953588 0.908975 0.884774 0.9071614 0.90645340 0.8340487 0.947787 0.939778 0.953146 0.952931 0.909925 0.892606 0.932386 9 0.909139 0.871882 0.00840967 14 0.795793 0.750116 0.0456767 0.0010054 0.94909401 weaklyHypermeth 1 1.000000 insignificant 0.378005 0.69715375 insignificant 1 1.00000 insignificant 0.03503476 0.284320 insignificant 1 insignificant 0.909247 0.8621945 0.0233890 14 0.805036 0.70692 0.0981189 9.0265e-05 0.7840619 weaklyHypermeth 1.3274e-03 1 weaklyHypermeth 2.7330e-01 0.419733 insignificant 1.0000e+00 1 insignificant 0.0350209 4.8275e-01 insignificant 1.0000e+00 insignificant 0.910450 0.924755 -0.00491560 17 0.832541 0.810573 0.0219686 1.8112e-01 0.41407341 insignificant 1.0000e+00 1.00000 insignificant 1.8492e-01 4.3820e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0072618 7.7872e-01 insignificant 1.0000000 insignificant 0.871882 0.8622661 0.0197280 15 0.750116 0.7157984 0.0343174 2.9778e-01 0.4246396 insignificant 1.0000e+00 1 insignificant 7.5175e-01 0.62465 insignificant 1.0000e+00 1 insignificant -1.3898e-05 9.9978e-01 insignificant 1.0000e+00 insignificant 0.874634 0.924755 -1.6404e-02 14 0.771061 0.810573 -0.0395113 7.4798e-01 0.0090759 weaklyHypometh 1.0000e+00 1.00000 insignificant 4.1873e-01 0.39653454 insignificant 1.0000e+00 1.00000 insignificant -0.0422965 1.7774e-01 insignificant 1.000000 insignificant 0.8645397 0.924755 -0.0320212 14 0.73410 0.810573 -0.0764768 5.6388e-01 5.4092e-03 weaklyHypometh 1.0000e+00 8.7245e-02 weaklyHypometh 0.44249086 5.3711e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04228261 3.9129e-01 insignificant 1.00000000 insignificant chr17 17788601 17789601 141189 ENSG00000212937 0.934699 423 9 0.840961 270 8 0.666215 173 8 0.929615 493 9 0.925824 85 8 0.882184 382 8 0.863126 117 5 0.869980 196 6 0.776832 133 5 0.927394 161 8 0.94905 259 8 0.8179487 36 3 0.8014934 281 7 0.891071 36 4 0.941884 186 7 0.6400000 38 5 0.9761905 27 3 0.78793 456 9 0.980595 237 8 0.92775 302 8 0.84615 44 4 0.922559 101 5 0.956032 191 9 0.929952 67 4 0.87545 69 5 0.908445 398 8 0.898923 97 7 0.904365 46 3 0.954894 245 8 0.888946 434 8 0.965002 594 8 0.94909 456 8 0.783245 310 7 0.7638209 190 8 0.9137786 531 8 0.485760 39 2 0.925817 97 6 0.85584 328 8 0.852056 368 9 0.857922 433 9 0.762258 381 9 0.824374 250 6 0.846519 299 9 0.910725 0.849723 0.733880 0.946573 0.864028 0.895081 0.793129 0.898604 0.835488 0.902949 0.924701 0.796883 0.911407 0.789071 0.863584 0.4854972 0.968802 0.779048 0.957523 0.921333 0.926089 0.841368 0.912314 0.941854 0.855405 0.915871 0.839331 0.893374 0.936575 0.921956 0.946873 0.917954 0.844315 0.6856556 0.93542437 0.5808113 0.910489 0.879717 0.832546 0.789301 0.730383 0.682140 0.809197 4 0.887439 0.932506 -0.04397185 8 0.888641 0.940503 -0.0518620 0.9999954 0.00037717 weaklyHypometh 1 0.075434 weaklyHypometh 0.999118 0.04895065 weaklyHypometh 1 1.00000 insignificant -0.05011446 0.043696 weaklyHypometh 1 insignificant 0.887439 0.8387960 0.0398416 8 0.888641 0.85731 0.0313312 3.3799e-05 0.0074235 weaklyHypermeth 5.2810e-04 1 weaklyHypermeth 5.4619e-02 0.066399 insignificant 6.1496e-01 1 insignificant 0.0784929 3.0136e-01 insignificant 1.0000e+00 insignificant 0.887439 0.809359 0.08572312 9 0.888641 0.827418 0.0612224 7.6264e-05 0.99837824 weaklyHypermeth 5.0843e-03 1.00000 weaklyHypermeth 5.9730e-04 9.9982e-01 weaklyHypermeth 6.3990e-02 1.000000 weaklyHypermeth 0.0379114 1.8645e-01 insignificant 1.0000000 insignificant 0.932506 0.8387960 0.0892446 8 0.940503 0.8573096 0.0831932 1.7666e-06 0.1383537 weaklyHypermeth 3.6805e-05 1 weaklyHypermeth 9.3296e-03 0.25920 weaklyHypermeth 1.4578e-01 1 insignificant 1.2861e-01 1.1022e-01 insignificant 1.0000e+00 insignificant 0.932506 0.809359 1.2656e-01 8 0.940503 0.827418 0.1130843 8.0539e-14 1.0000000 weaklyHypermeth 4.0270e-11 1.00000 weaklyHypermeth 1.7251e-06 0.99999998 weaklyHypermeth 5.5423e-04 1.00000 weaklyHypermeth 0.0880258 3.4737e-03 weaklyHypermeth 0.496249 insignificant 0.8387960 0.809359 0.0370584 8 0.85731 0.827418 0.0298912 5.2070e-09 1.0489e-01 weaklyHypermeth 5.2070e-06 9.7118e-01 weaklyHypermeth 0.00046198 5.5394e-01 weaklyHypermeth 0.23099 1.0000e+00 insignificant -0.04058149 5.7610e-01 insignificant 1.00000000 insignificant chr17 18074891 18075891 141192 LLGL1 ENSG00000131899 0.782032 280 8 0.742796 177 5 0.809282 185 6 0.665157 326 8 0.707324 131 6 0.729229 364 8 0.722529 189 7 0.657568 157 7 0.598533 129 5 0.828687 126 5 0.86911 189 6 0.8026395 122 5 0.5552375 188 5 0.750000 4 0 0.670710 190 5 0.9731021 142 6 0.8782877 189 6 0.57691 301 8 0.639758 298 8 0.68935 306 8 0.89528 167 6 0.332042 163 5 0.730627 137 6 0.658382 125 6 0.70417 185 6 0.637873 283 8 0.541340 158 7 0.699256 85 5 0.791551 185 6 0.645931 199 8 0.566558 321 8 0.82236 310 6 0.465812 192 6 0.6257483 186 6 0.4944215 229 7 0.308626 216 6 0.594539 141 7 0.55333 245 8 0.424073 407 6 0.427103 335 6 0.304621 253 6 0.359928 247 6 0.456995 317 6 0.843646 0.834740 0.778240 0.767520 0.887973 0.851304 0.884398 0.843896 0.824783 0.814719 0.902397 0.768139 0.671390 0.851507 0.762633 0.9734073 0.841331 0.608670 0.749660 0.801705 0.877585 0.345714 0.802042 0.802906 0.799457 0.755049 0.793319 0.921127 0.733558 0.791215 0.652808 0.915050 0.428012 0.7020405 0.40028667 0.4602636 0.701235 0.690463 0.364233 0.396471 0.363810 0.515095 0.465929 5 0.785625 0.739601 0.03255559 6 0.626115 0.562829 0.0632859 0.2081063 0.19518614 insignificant 1 1.000000 insignificant 0.405175 0.16516736 insignificant 1 1.00000 insignificant 0.06363049 0.208272 insignificant 1 insignificant 0.785822 0.5331126 0.2094394 6 0.683034 0.54810 0.1349351 1.4651e-11 0.9992769 hypermethylated 4.1859e-10 1 hypermethylated 3.4870e-05 0.999757 hypermethylated 9.9628e-04 1 hypermethylated 0.2253326 2.7245e-03 weaklyHypermeth 9.7303e-02 weaklyHypermeth 0.786002 0.270686 0.41674033 6 0.655332 0.407464 0.2478679 1.8035e-20 0.42364153 hypermethylated 9.0177e-18 1.00000 hypermethylated 8.2347e-08 5.1410e-01 hypermethylated 2.7449e-05 1.000000 hypermethylated 0.3378680 1.5064e-06 hypermethylated 0.0015064 hypermethylated 0.738961 0.5326716 0.1747777 6 0.562829 0.5024241 0.0604046 6.6420e-08 0.9999981 weaklyHypermeth 1.8450e-06 1 weaklyHypermeth 4.7008e-05 0.99997 weaklyHypermeth 1.5164e-03 1 weaklyHypermeth 1.6170e-01 2.3763e-02 weaklyHypermeth 4.4837e-01 insignificant 0.740322 0.270686 3.7366e-01 6 0.657846 0.407464 0.2503813 6.9630e-11 0.9873962 hypermethylated 1.7407e-08 1.00000 hypermethylated 4.3266e-07 0.99865134 hypermethylated 2.1633e-04 1.00000 hypermethylated 0.2742375 7.1465e-05 hypermethylated 0.026029 hypermethylated 0.5311721 0.270686 0.1922459 6 0.44768 0.407464 0.0402122 1.3883e-01 2.3228e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.58827487 3.0997e-01 insignificant 1.00000 1.0000e+00 insignificant 0.11253539 7.1559e-02 insignificant 1.00000000 insignificant chr17 18270314 18271314 141198 KRT17P1 ENSG00000131885 0.892988 331 8 0.823256 92 5 0.886706 126 8 0.863681 180 7 0.850000 85 5 0.779051 368 12 0.872544 70 5 0.933128 136 9 0.725449 98 6 0.963033 148 9 0.80051 217 10 0.9038462 42 2 0.9398526 275 9 0.899217 94 7 0.833974 125 8 0.9814815 29 3 0.5000000 2 0 0.77998 517 7 0.906310 309 8 0.95065 222 7 0.80420 85 8 0.880224 130 7 0.958915 133 7 0.885494 50 5 0.77378 138 8 0.902116 121 9 0.862102 143 9 0.865278 58 5 0.952913 164 8 0.871457 123 8 0.927100 164 8 0.97859 221 7 0.466412 134 5 0.6922032 223 6 0.6895089 116 7 0.945796 128 5 0.688942 119 8 0.65271 204 8 0.886742 219 8 0.892382 246 6 0.907110 156 6 0.833901 382 6 0.829543 191 7 0.899067 0.733152 0.851350 0.897066 0.892424 0.907932 0.914502 0.925085 0.815844 0.917848 0.933586 0.924242 0.905687 0.816498 0.828788 0.9744877 0.846461 0.868077 0.904826 0.937322 0.826004 0.914594 0.933951 0.896970 0.806833 0.857143 0.834924 0.794697 0.959975 0.913366 0.875946 0.969497 0.557359 0.7437352 0.55567821 0.9507235 0.667424 0.581724 0.879184 0.897208 0.892130 0.876703 0.899547 2 0.888600 0.900654 -0.01148105 8 0.798157 0.856426 -0.0582697 0.9933277 0.22203052 insignificant 1 1.000000 insignificant 0.992940 0.46092830 insignificant 1 1.00000 insignificant -0.03423150 0.258712 insignificant 1 insignificant 0.888600 0.6558442 0.2397996 8 0.798157 0.65214 0.1460184 1.9689e-29 0.9998342 hypermethylated 2.8127e-27 1 hypermethylated 1.8242e-06 0.997812 hypermethylated 8.6868e-05 1 hypermethylated 0.1650209 4.5240e-02 weaklyHypermeth 7.4164e-01 insignificant 0.888168 0.897822 -0.00147535 6 0.829069 0.864536 -0.0354665 5.7319e-02 0.66335848 insignificant 1.0000e+00 1.00000 insignificant 5.1335e-01 7.8693e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0156528 5.9280e-01 insignificant 1.0000000 insignificant 0.900654 0.6558442 0.2524811 8 0.856426 0.6521381 0.2042881 7.7109e-18 0.9999999 hypermethylated 7.7109e-16 1 hypermethylated 1.3507e-05 0.99999 hypermethylated 5.4996e-04 1 hypermethylated 1.9925e-01 2.2775e-02 weaklyHypermeth 4.3797e-01 insignificant 0.899670 0.897822 1.3335e-02 6 0.834338 0.864536 -0.0301980 1.0514e-01 0.9675902 insignificant 1.0000e+00 1.00000 insignificant 4.9339e-01 0.92073987 insignificant 1.0000e+00 1.00000 insignificant 0.0185787 4.4823e-01 insignificant 1.000000 insignificant 0.6589659 0.897822 -0.2325198 6 0.64258 0.864536 -0.2219591 9.9987e-01 2.3072e-08 hypomethylated 1.0000e+00 1.8066e-06 hypomethylated 0.99974931 3.0721e-03 weaklyHypometh 1.00000 9.9101e-02 weaklyHypometh -0.18067369 3.3056e-02 weaklyHypometh 0.66112742 insignificant chr17 18270654 18271654 141199 KRT17P1 ENSG00000131885 0.885351 607 11 0.853391 224 8 0.906733 267 11 0.873871 463 10 0.813589 133 8 0.806068 611 15 0.898674 210 8 0.922433 258 12 0.771694 160 9 0.950270 232 12 0.82234 382 13 0.9031433 97 6 0.9507156 385 12 0.945513 85 8 0.854135 253 11 0.9592593 79 8 0.8590476 59 4 0.79476 899 10 0.905355 469 11 0.92363 392 10 0.79686 128 10 0.908974 171 9 0.951184 328 10 0.865804 133 8 0.83738 238 11 0.888743 274 12 0.885576 245 12 0.889935 137 8 0.942071 250 11 0.892399 254 11 0.938721 334 11 0.94878 392 10 0.553959 249 8 0.6925820 300 10 0.5841463 189 11 0.910075 199 10 0.732607 242 11 0.71251 315 11 0.933590 531 12 0.917208 498 10 0.922643 425 10 0.860861 615 10 0.859896 517 10 0.886198 0.831072 0.894773 0.880355 0.810229 0.904723 0.942262 0.893615 0.863534 0.911076 0.927601 0.894786 0.946954 0.890862 0.879764 0.9469879 0.933930 0.880866 0.901311 0.919282 0.835021 0.929788 0.916234 0.862710 0.908364 0.893574 0.903056 0.887359 0.943795 0.948366 0.912849 0.923448 0.722351 0.7736168 0.53732993 0.9022022 0.779843 0.745825 0.930298 0.903143 0.939016 0.914332 0.912182 6 0.897157 0.913662 -0.01650573 11 0.818475 0.869596 -0.0511211 0.9882273 0.07424434 insignificant 1 1.000000 insignificant 0.986916 0.32424502 insignificant 1 1.00000 insignificant -0.01553611 0.409424 insignificant 1 insignificant 0.897157 0.7101740 0.1884709 11 0.818475 0.68598 0.1324926 4.0748e-28 0.9999715 weaklyHypermeth 5.0935e-26 1 weaklyHypermeth 3.2667e-08 0.999947 weaklyHypermeth 2.5128e-06 1 weaklyHypermeth 0.1823528 1.5576e-02 weaklyHypermeth 3.1788e-01 insignificant 0.897026 0.916860 -0.01731605 10 0.846132 0.891175 -0.0450432 4.3662e-01 0.29436602 insignificant 1.0000e+00 1.00000 insignificant 9.1201e-01 4.0784e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0188403 3.7609e-01 insignificant 1.0000000 insignificant 0.913662 0.7101740 0.1994576 11 0.869596 0.6859826 0.1836137 4.9376e-18 1.0000000 weaklyHypermeth 6.1720e-16 1 weaklyHypermeth 4.1801e-07 1.00000 weaklyHypermeth 3.2155e-05 1 weaklyHypermeth 1.9789e-01 1.1013e-02 weaklyHypermeth 2.6221e-01 insignificant 0.913210 0.916860 -1.1607e-04 10 0.853296 0.891175 -0.0378791 5.0600e-01 0.9029247 insignificant 1.0000e+00 1.00000 insignificant 8.5328e-01 0.79461878 insignificant 1.0000e+00 1.00000 insignificant -0.0033042 8.7767e-01 insignificant 1.000000 insignificant 0.7126437 0.916860 -0.1902805 10 0.68244 0.891175 -0.2087302 1.0000e+00 2.3486e-08 weaklyHypometh 1.0000e+00 1.8066e-06 weaklyHypometh 0.99999750 1.3563e-04 weaklyHypometh 1.00000 9.0421e-03 weaklyHypometh -0.20119309 1.0066e-02 weaklyHypometh 0.32470165 insignificant chr17 18285065 18286065 141205 ENSG00000214856 0.836184 192 5 0.828244 127 5 0.820481 164 5 0.893849 230 5 0.918182 71 5 0.836852 284 5 0.827569 104 5 0.877656 159 5 0.847859 145 5 0.811863 171 5 0.81866 136 5 0.7336232 121 5 0.8714383 187 5 0.847107 130 5 0.880670 193 5 0.8201936 136 3 0.8125000 21 2 0.91160 234 5 0.801188 193 3 0.85159 185 5 0.92083 55 4 0.887566 84 5 0.855992 193 5 0.886416 98 5 0.94552 75 3 0.901191 163 5 0.798659 150 5 0.785888 118 5 0.879445 78 3 0.848086 203 5 0.854300 236 5 0.84485 153 5 0.650141 136 5 0.5396825 60 3 0.5100000 140 3 0.414386 55 3 0.720785 157 5 0.71041 122 5 0.724008 159 4 0.802623 120 5 0.898770 133 3 0.894220 159 5 0.903068 171 5 0.760863 0.778421 0.763726 0.852225 0.851592 0.763786 0.748447 0.807183 0.817327 0.818768 0.770092 0.671083 0.765481 0.828050 0.800215 0.7105872 0.723247 0.819295 0.759754 0.805204 0.856204 0.811343 0.786738 0.835483 0.919787 0.830924 0.702613 0.693481 0.788254 0.798130 0.774974 0.757662 0.602542 0.4039107 0.42523659 0.4129504 0.684991 0.610180 0.785091 0.739331 0.815968 0.829928 0.840126 3 0.792963 0.798257 -0.00203401 5 0.846044 0.872217 -0.0261724 0.8845882 0.37902160 insignificant 1 1.000000 insignificant 0.983176 0.19293364 insignificant 1 1.00000 insignificant -0.02503012 0.141180 lowCoverage 1 lowCoverage 0.792756 0.5582090 0.2381029 5 0.840253 0.63073 0.2095199 1.3159e-17 0.9999412 hypermethylated 7.7404e-16 1 hypermethylated 3.2270e-08 0.999982 hypermethylated 2.5128e-06 1 hypermethylated 0.2514636 3.5563e-03 lowCoverage 1.1854e-01 lowCoverage 0.792963 0.799191 -0.01853920 5 0.846044 0.726569 0.1194755 4.2435e-01 0.12353083 insignificant 1.0000e+00 1.00000 insignificant 7.5247e-01 1.5901e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0021727 9.5527e-01 lowCoverage 1.0000000 lowCoverage 0.797879 0.5582090 0.2404326 5 0.846660 0.6307333 0.2159267 2.0422e-11 0.9998694 hypermethylated 7.8545e-10 1 hypermethylated 1.3505e-08 1.00000 hypermethylated 2.2508e-06 1 hypermethylated 2.7649e-01 2.0332e-03 lowCoverage 7.5305e-02 lowCoverage 0.798257 0.799191 -1.7450e-02 5 0.872217 0.726569 0.1456479 9.9078e-01 0.3753489 insignificant 1.0000e+00 1.00000 insignificant 6.9009e-01 0.61958299 insignificant 1.0000e+00 1.00000 insignificant 0.0228574 5.7163e-01 lowCoverage 1.000000 lowCoverage 0.5582090 0.800270 -0.2596854 5 0.63073 0.871883 -0.2411493 9.9993e-01 4.9979e-07 hypomethylated 1.0000e+00 2.4335e-05 hypomethylated 0.99999637 4.7684e-06 hypomethylated 1.00000 6.5453e-04 hypomethylated -0.25363631 2.8010e-03 lowCoverage 0.16253846 lowCoverage chr17 18342844 18343844 141211 LGALS9C ENSG00000171916 0.902172 199 6 0.775771 102 6 0.578690 55 5 0.951307 88 6 0.750000 11 1 0.876288 132 6 0.972222 29 2 0.812302 34 5 0.777965 90 5 0.815222 63 6 0.89336 88 5 0.8579365 21 3 0.8477650 167 6 0.848796 69 6 0.892418 127 6 1.0000000 1 0 0.7500000 3 0 0.87643 320 6 0.930014 68 6 0.89259 85 6 0.70833 20 1 0.881944 54 6 0.902857 32 5 0.845623 59 6 0.80370 120 6 0.763781 89 6 0.862107 62 6 0.913690 36 5 0.905567 92 6 0.901819 97 5 0.933261 53 6 0.93856 62 6 0.852778 37 6 0.7378227 80 6 0.6607143 73 3 0.985294 26 1 0.820202 80 6 0.85833 50 6 0.908981 121 6 0.902775 110 6 0.896086 112 5 0.762626 60 5 0.934201 201 6 0.879980 0.765925 0.465100 0.944307 0.771930 0.861163 0.985380 0.824018 0.745776 0.847803 0.898090 0.812865 0.887652 0.850243 0.840272 NA 0.767754 0.889838 0.949381 0.880117 0.442982 0.824805 0.896136 0.770211 0.896686 0.825966 0.837951 0.882206 0.841512 0.875560 0.939356 0.884830 0.845322 0.7585032 0.81140351 0.9428198 0.838995 0.866228 0.891959 0.920631 0.872434 0.833466 0.925679 0 0.863584 0.869845 -0.00274426 6 0.861992 0.869005 -0.0070130 0.4649250 0.02190150 weaklyHypometh 1 1.000000 insignificant 0.590296 0.03601154 weaklyHypometh 1 1.00000 insignificant -0.01337497 0.654421 lowCoverage 1 lowCoverage 0.863584 0.8526012 0.0116226 6 0.861992 0.82680 0.0351958 1.2755e-02 0.3143083 weaklyHypermeth 1.3569e-01 1 insignificant 1.7988e-01 0.276835 insignificant 1.0000e+00 1 insignificant 0.0308718 5.5685e-01 lowCoverage 1.0000e+00 lowCoverage 0.863584 0.912252 -0.04688868 6 0.861992 0.910176 -0.0481839 9.9136e-01 0.04153199 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.6229e-01 2.8743e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0308717 4.2647e-01 lowCoverage 1.0000000 lowCoverage 0.869845 0.8526012 0.0176653 6 0.869005 0.8267963 0.0422089 8.5959e-03 0.6291876 weaklyHypermeth 9.3911e-02 1 weaklyHypermeth 3.7724e-02 0.72293 weaklyHypermeth 4.7155e-01 1 insignificant 4.4247e-02 4.0424e-01 lowCoverage 1.0000e+00 lowCoverage 0.869845 0.912252 -4.8504e-02 6 0.869005 0.910176 -0.0411709 8.7839e-01 0.1772592 insignificant 1.0000e+00 1.00000 insignificant 4.5430e-01 0.25293928 insignificant 1.0000e+00 1.00000 insignificant -0.0174967 6.4568e-01 insignificant 1.000000 insignificant 0.8526012 0.912252 -0.0617107 6 0.82680 0.910176 -0.0833797 9.4382e-01 3.2354e-02 weaklyHypometh 1.0000e+00 3.8516e-01 insignificant 0.70683754 2.0261e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06174342 2.8962e-01 lowCoverage 1.00000000 lowCoverage chr17 20288446 20289446 141226 ENSG00000219676 0.902567 201 6 0.749943 66 5 0.895421 51 5 0.803917 71 6 0.866667 13 0 0.838912 112 6 0.800000 15 0 0.966667 50 5 0.808291 56 5 0.847222 45 5 0.77152 53 5 0.9333333 17 2 0.8586207 124 5 0.918398 80 5 0.832194 116 5 1.0000000 1 0 1.0000000 3 0 0.83084 274 6 0.854529 94 6 0.89848 108 6 0.63333 10 0 0.830000 25 4 0.838889 39 5 0.783838 51 5 0.77778 51 5 0.941228 72 6 0.851905 70 5 0.833333 23 3 0.910638 73 5 0.972068 189 6 0.942857 53 6 0.92500 50 6 0.701667 47 5 0.5110823 66 5 0.7435897 104 3 0.740196 26 1 0.777540 78 5 0.78194 62 6 0.903507 121 6 0.955148 114 6 0.847358 89 6 0.886114 62 5 0.917834 193 6 0.896203 0.759428 0.889370 0.808555 0.871795 0.814195 0.794872 0.967949 0.769083 0.893429 0.772978 0.903846 0.876598 0.904304 0.809089 NA 0.911233 0.816479 0.818896 0.887159 0.570513 0.867308 0.808761 0.780886 0.846154 0.950202 0.849863 0.798077 0.907201 0.964458 0.939560 0.911538 0.694071 0.4938728 0.74716141 0.7115385 0.740583 0.723558 0.868963 0.949002 0.807234 0.878256 0.912809 0 0.852258 0.895184 -0.04384607 5 0.854936 0.905115 -0.0501786 0.9930225 0.00067486 weaklyHypometh 1 0.112477 insignificant 0.947279 0.07649776 insignificant 1 1.00000 insignificant 0.01547060 0.629195 lowCoverage 1 lowCoverage 0.852258 0.7937337 0.0704795 5 0.854936 0.78407 0.0708686 7.2967e-03 0.2231539 weaklyHypermeth 8.2917e-02 1 weaklyHypermeth 5.4731e-02 0.398262 insignificant 6.1496e-01 1 insignificant 0.1595398 9.8496e-03 lowCoverage 2.2432e-01 lowCoverage 0.852258 0.901554 -0.04671174 5 0.854936 0.909686 -0.0547501 9.9916e-01 0.00177424 weaklyHypometh 1.0000e+00 0.44356 insignificant 9.2649e-01 8.1467e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0331160 1.8977e-01 lowCoverage 1.0000000 lowCoverage 0.895184 0.7937337 0.1267589 5 0.905115 0.7840675 0.1210472 4.1378e-03 0.9957759 weaklyHypermeth 4.9853e-02 1 weaklyHypermeth 4.3445e-02 0.98617 weaklyHypermeth 5.0517e-01 1 insignificant 1.4407e-01 1.6548e-02 lowCoverage 3.5973e-01 lowCoverage 0.895184 0.901554 -2.7114e-03 5 0.905115 0.909686 -0.0045715 6.5423e-01 0.7150519 insignificant 1.0000e+00 1.00000 insignificant 6.5076e-01 0.83859421 insignificant 1.0000e+00 1.00000 insignificant -0.0485866 1.5661e-01 lowCoverage 1.000000 lowCoverage 0.7937337 0.901554 -0.1132837 6 0.78407 0.909686 -0.1256186 9.9467e-01 3.8822e-02 weaklyHypometh 1.0000e+00 4.3620e-01 insignificant 0.99189809 4.8927e-02 weaklyHypometh 1.00000 6.7954e-01 insignificant -0.19265578 4.0228e-03 lowCoverage 0.17718301 lowCoverage chr17 20346289 20347289 141232 ENSG00000216637 0.873316 202 6 0.782620 181 6 0.880823 213 6 0.859154 233 6 0.899582 105 4 0.836902 357 6 0.855624 168 6 0.825040 210 6 0.763896 269 6 0.847744 218 6 0.82374 202 6 0.8253263 158 6 0.8304525 216 6 0.871722 132 6 0.871183 240 6 0.8262289 129 4 0.8194444 30 2 0.82923 292 6 0.898698 274 6 0.87046 254 6 0.88014 79 5 0.864286 161 6 0.859565 183 6 0.919629 119 6 0.95802 113 6 0.841030 198 6 0.785868 140 6 0.787725 188 6 0.792532 136 6 0.883379 287 6 0.863631 323 6 0.85176 255 6 0.640962 187 6 0.5465834 99 4 0.6525573 214 6 0.799603 43 3 0.738745 223 6 0.68199 219 6 0.882423 234 4 0.871469 175 4 0.885435 182 4 0.879300 175 4 0.909990 196 4 0.798744 0.738676 0.802198 0.815674 0.821934 0.836125 0.796361 0.787135 0.753880 0.761897 0.788130 0.799390 0.743094 0.841962 0.799601 0.7182103 0.733609 0.771332 0.839098 0.804279 0.874960 0.800858 0.843871 0.872050 0.926551 0.806665 0.691487 0.713817 0.805456 0.821787 0.796044 0.784541 0.562856 0.4287298 0.57182293 0.6518535 0.679065 0.673409 0.872199 0.791249 0.796594 0.821126 0.841166 4 0.806270 0.837764 -0.01651832 6 0.842322 0.858341 -0.0160190 0.9005341 0.06815360 insignificant 1 1.000000 insignificant 0.874388 0.00903852 weaklyHypometh 1 1.00000 insignificant -0.01273719 0.462663 insignificant 1 insignificant 0.806270 0.6467005 0.1701597 6 0.842322 0.67236 0.1699594 4.4592e-16 0.9996110 weaklyHypermeth 2.1234e-14 1 weaklyHypermeth 1.5530e-08 0.972014 weaklyHypermeth 1.7139e-06 1 weaklyHypermeth 0.1678186 4.5242e-03 weaklyHypermeth 1.4138e-01 insignificant 0.806270 0.803534 -0.03374183 4 0.842322 0.879307 -0.0369853 9.8657e-01 0.01184593 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9985e-01 8.6867e-03 lowCoverage 1.0000e+00 0.972573 lowCoverage -0.0411644 8.8576e-04 lowCoverage 0.0885759 lowCoverage 0.837764 0.6467005 0.1870358 6 0.858341 0.6723627 0.1859783 2.9964e-11 0.9993873 weaklyHypermeth 1.1098e-09 1 weaklyHypermeth 1.9875e-07 0.94159 weaklyHypermeth 1.9419e-05 1 weaklyHypermeth 1.8056e-01 2.3771e-03 weaklyHypermeth 8.0274e-02 weaklyHypermeth 0.837764 0.803534 -2.0233e-02 4 0.858341 0.879307 -0.0209664 8.7331e-01 0.1412867 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.8774e-01 0.17526913 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0284272 1.0400e-01 lowCoverage 1.000000 lowCoverage 0.6467005 0.803534 -0.2204916 4 0.67236 0.879307 -0.2069447 9.9864e-01 3.4764e-07 lowCoverage 1.0000e+00 1.8455e-05 lowCoverage 0.99980134 2.0430e-05 lowCoverage 1.00000 1.8572e-03 lowCoverage -0.20898307 1.7382e-03 lowCoverage 0.10863941 lowCoverage chr17 20360697 20361697 141238 ENSG00000217740 0.859799 629 11 0.776405 280 8 0.853225 282 11 0.898116 516 11 0.802465 128 8 0.891959 494 11 0.857280 209 11 0.807054 251 12 0.861906 171 10 0.934045 242 12 0.85392 318 13 0.7987296 102 10 0.9022260 372 12 0.882532 110 9 0.906974 263 11 0.7499771 79 8 0.8938095 55 4 0.90161 930 10 0.934072 530 11 0.97354 397 10 0.82645 142 12 0.886285 240 10 0.856007 295 11 0.859783 108 8 0.75768 204 10 0.912226 257 11 0.791275 201 10 0.739792 111 8 0.908671 285 11 0.956241 227 8 0.852645 299 11 0.93299 478 10 0.683763 241 12 0.7329625 284 10 0.5952381 190 12 0.822684 164 8 0.719013 171 10 0.70728 311 12 0.890586 577 10 0.892808 390 9 0.937386 414 10 0.929267 819 10 0.873917 461 10 0.877147 0.786909 0.929755 0.879456 0.831157 0.905333 0.929199 0.844894 0.886992 0.910676 0.927143 0.920420 0.922608 0.876500 0.898050 0.7998792 0.887673 0.897626 0.929737 0.959487 0.873704 0.901599 0.890389 0.896131 0.872172 0.931096 0.811674 0.901757 0.900150 0.952835 0.922050 0.898698 0.751250 0.7536066 0.62572942 0.8353832 0.870608 0.748061 0.898898 0.924673 0.930765 0.925403 0.933567 6 0.896004 0.892443 0.00094027 11 0.873959 0.785608 0.0883508 0.4967807 0.91723937 insignificant 1 1.000000 insignificant 0.509680 0.86065461 insignificant 1 1.00000 insignificant 0.01031181 0.664724 insignificant 1 insignificant 0.895797 0.7157585 0.1792518 11 0.798889 0.67056 0.1283335 1.5865e-23 0.9999992 weaklyHypermeth 1.5865e-21 1 weaklyHypermeth 3.8257e-08 0.999933 weaklyHypermeth 2.7326e-06 1 weaklyHypermeth 0.1568251 2.0525e-03 weaklyHypermeth 8.2101e-02 weaklyHypermeth 0.895123 0.915070 -0.01341807 10 0.847831 0.843143 0.0046881 8.3660e-01 0.02689994 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.7455e-01 9.5582e-03 weaklyHypometh 1.0000e+00 0.972573 insignificant -0.0378104 4.9878e-02 weaklyHypometh 1.0000000 insignificant 0.892794 0.7152318 0.1725390 11 0.848108 0.6286460 0.2194619 5.9594e-13 1.0000000 weaklyHypermeth 2.9797e-11 1 weaklyHypermeth 1.4680e-05 1.00000 weaklyHypermeth 5.6463e-04 1 weaklyHypermeth 1.4651e-01 2.5351e-03 weaklyHypermeth 8.1777e-02 weaklyHypermeth 0.892617 0.915070 -1.9757e-02 10 0.819466 0.843143 -0.0236766 9.9526e-01 0.1118839 insignificant 1.0000e+00 1.00000 insignificant 9.9915e-01 0.06436860 insignificant 1.0000e+00 1.00000 insignificant -0.0481222 5.5043e-02 insignificant 1.000000 insignificant 0.7168405 0.915070 -0.1978763 10 0.65064 0.843143 -0.1925014 1.0000e+00 5.5819e-10 weaklyHypometh 1.0000e+00 7.2776e-08 weaklyHypometh 1.00000000 3.3419e-06 weaklyHypometh 1.00000 6.5453e-04 weaklyHypometh -0.19463547 7.0014e-04 weaklyHypometh 0.05834482 weaklyHypometh chr17 20361036 20362036 141239 ENSG00000217740 0.866512 355 8 0.748742 101 5 0.813462 131 8 0.926181 240 8 0.832948 75 4 0.889440 296 8 0.848810 93 7 0.805635 146 9 0.830413 91 8 0.945503 148 9 0.84118 216 10 0.6857143 50 7 0.8798464 266 9 0.880714 107 9 0.910827 125 8 0.7764550 51 4 1.0000000 4 0 0.89226 526 7 0.868968 368 7 0.94724 224 7 0.82855 94 9 0.903181 132 8 0.841343 99 8 0.870635 54 5 0.74619 120 7 0.870470 130 8 0.809693 113 7 0.618975 66 6 0.934312 196 8 0.958261 97 5 0.821224 142 8 0.95836 272 7 0.612008 141 9 0.6652519 208 7 0.6064394 106 8 0.564080 91 3 0.664187 97 7 0.59947 197 9 0.811630 188 6 0.862933 168 7 0.916508 167 6 0.856742 495 6 0.842198 157 7 0.898851 0.634974 0.893087 0.931368 0.902405 0.895092 0.953609 0.861491 0.849798 0.917549 0.943350 0.836593 0.906910 0.880655 0.874794 0.9080924 NA 0.862118 0.883628 0.931448 0.882376 0.905786 0.869563 0.929611 0.857719 0.830031 0.832181 0.811720 0.918118 0.959006 0.882607 0.923467 0.623457 0.6202184 0.55478671 0.5849153 0.775935 0.538988 0.816078 0.903040 0.869259 0.848417 0.896634 2 0.890335 0.885658 0.00101830 8 0.852636 0.742922 0.1097137 0.5261755 0.55725339 insignificant 1 1.000000 insignificant 0.377410 0.66225317 insignificant 1 1.00000 insignificant 0.01277608 0.695583 insignificant 1 insignificant 0.890028 0.6415771 0.2490787 8 0.769302 0.61005 0.1592482 2.2816e-25 1.0000000 hypermethylated 2.5351e-23 1 hypermethylated 7.7018e-09 1.000000 hypermethylated 9.6273e-07 1 hypermethylated 0.2409698 1.3065e-08 hypermethylated 2.6130e-06 hypermethylated 0.888700 0.880851 0.01615684 6 0.827009 0.794537 0.0324718 2.7083e-01 0.30103995 insignificant 1.0000e+00 1.00000 insignificant 2.4730e-01 2.9126e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0015405 9.4908e-01 insignificant 1.0000000 insignificant 0.886394 0.6408115 0.2486199 8 0.839620 0.5631270 0.2764933 1.7789e-16 1.0000000 hypermethylated 1.4825e-14 1 hypermethylated 1.4186e-06 1.00000 hypermethylated 8.5340e-05 1 hypermethylated 2.2819e-01 2.6590e-06 hypermethylated 3.7986e-04 hypermethylated 0.886000 0.880851 9.0322e-03 6 0.799840 0.794537 0.0053025 3.1643e-01 0.6286408 insignificant 1.0000e+00 1.00000 insignificant 5.0713e-01 0.46027152 insignificant 1.0000e+00 1.00000 insignificant -0.0112356 7.3476e-01 insignificant 1.000000 insignificant 0.6419001 0.880851 -0.2523348 6 0.57207 0.794537 -0.2224722 1.0000e+00 5.8221e-10 hypomethylated 1.0000e+00 7.2776e-08 hypomethylated 0.99999999 2.5191e-05 hypomethylated 1.00000 2.0992e-03 hypomethylated -0.23942933 3.8144e-06 hypomethylated 0.00122183 hypomethylated chr17 20629040 20630040 141279 ENSG00000213668 0.947053 849 6 0.754625 368 6 0.880411 59 6 0.931747 658 6 0.906724 84 6 0.924192 504 6 0.918634 148 6 0.878175 110 6 0.933434 80 6 0.859375 36 4 0.93798 327 6 0.9791667 33 4 0.9068851 48 5 0.968661 50 6 0.901515 58 6 0.9027778 14 0 NA 0 0 0.79852 753 6 0.942796 369 6 0.94419 535 6 0.91667 63 6 1.000000 13 0 0.967977 185 6 0.950000 60 6 0.92358 137 6 0.958045 282 6 0.933261 51 6 0.862963 34 5 0.939647 178 6 0.953223 237 6 0.920134 415 6 0.94997 440 6 0.794363 254 6 0.6591787 114 6 0.5312500 69 4 0.750000 8 0 0.846685 179 6 0.71390 298 6 0.938327 729 6 0.961288 636 6 0.957596 992 6 0.972727 184 6 0.940239 559 6 0.949056 0.779469 0.880720 0.929166 0.910822 0.926368 0.926301 0.892813 0.940846 0.969626 0.940482 0.984813 0.875357 0.963416 0.887992 0.8676012 NA 0.931602 0.942767 0.945987 0.880582 1.000000 0.965606 0.940810 0.901475 0.957893 0.913137 0.856698 0.933220 0.956102 0.919529 0.931878 0.796246 0.6238676 0.55528232 0.7737730 0.794806 0.745144 0.941855 0.969589 0.959012 0.966832 0.934160 1 0.926604 0.939379 -0.01299960 6 0.860782 0.951097 -0.0903153 0.7405899 0.01283590 weaklyHypometh 1 0.954119 insignificant 0.977932 0.05512531 insignificant 1 1.00000 insignificant -0.03347162 0.044218 weaklyHypometh 1 insignificant 0.926925 0.7271739 0.1983359 6 0.925486 0.71806 0.2074241 3.2440e-13 1.0000000 weaklyHypermeth 1.0813e-11 1 weaklyHypermeth 1.3196e-07 1.000000 weaklyHypermeth 8.2472e-06 1 weaklyHypermeth 0.1902543 7.3059e-03 lowCoverage 1.9226e-01 lowCoverage 0.926925 0.954516 -0.02614559 6 0.925486 0.952006 -0.0265193 9.9709e-01 0.03159194 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.7934e-01 2.2868e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0478845 2.8290e-03 weaklyHypometh 0.2357462 insignificant 0.939147 0.7271739 0.2067344 6 0.934796 0.7180624 0.2167333 4.4995e-12 1.0000000 hypermethylated 1.9563e-10 1 hypermethylated 4.0979e-08 1.00000 hypermethylated 5.8541e-06 1 hypermethylated 2.2373e-01 3.7877e-03 lowCoverage 1.1837e-01 lowCoverage 0.939147 0.954516 -1.4322e-02 6 0.934796 0.952006 -0.0172100 8.8394e-01 0.2068401 insignificant 1.0000e+00 1.00000 insignificant 3.0195e-01 0.59178802 insignificant 1.0000e+00 1.00000 insignificant -0.0144129 2.3496e-01 insignificant 1.000000 insignificant 0.7271739 0.954516 -0.2254692 6 0.71806 0.952006 -0.2339433 1.0000e+00 6.3712e-07 hypomethylated 1.0000e+00 2.7701e-05 hypomethylated 0.99999932 1.2567e-06 hypomethylated 1.00000 3.8168e-04 hypomethylated -0.23813880 3.0910e-03 lowCoverage 0.16268286 lowCoverage chr17 21006270 21007270 141292 DHRS7B ENSG00000109016 0.584274 97 4 0.672846 100 5 0.416667 21 1 0.562667 60 2 0.637662 49 5 0.691930 84 5 0.572698 42 5 0.685745 45 5 0.714286 29 5 0.541667 25 2 0.50381 82 5 0.7500000 8 0 0.6830769 48 3 0.480769 23 1 0.698485 50 5 0.4500000 12 0 0.8512821 23 1 0.68030 87 4 0.580000 45 5 0.69476 41 5 0.46667 9 0 NA 0 0 0.695310 46 5 0.678571 42 4 0.83333 30 2 0.562222 53 5 0.604167 20 2 0.916667 11 1 0.531090 65 5 0.630811 89 4 0.648082 69 4 0.64303 61 5 0.670556 56 5 0.5416667 44 5 0.5194872 62 5 0.700000 12 2 0.549071 47 2 0.61333 72 5 0.593954 103 5 0.623611 110 5 0.603111 75 5 0.755556 49 3 0.680921 62 4 0.735311 0.739040 0.672619 0.719048 0.735622 0.872807 0.749206 0.705128 0.685714 0.750000 0.613114 0.897998 0.797161 0.321429 0.727273 0.7142857 0.761905 0.733304 0.714286 0.771259 0.476190 NA 0.856138 0.625000 0.773810 0.623016 0.702381 0.805386 0.607028 0.808975 0.842036 0.797619 0.753968 0.6190476 0.61098901 0.5714286 0.712627 0.795238 0.765990 0.713690 0.765476 0.920635 0.704887 0 0.652935 0.696538 -0.01377942 4 0.655474 0.693976 -0.0385028 0.8351641 0.47243079 lowCoverage 1 1.000000 lowCoverage 0.599790 0.73167288 lowCoverage 1 1.00000 lowCoverage -0.03280322 0.483671 lowCoverage 1 lowCoverage 0.651767 0.6416382 0.0343599 5 0.631013 0.59120 0.0398150 1.0151e-01 0.7856428 insignificant 8.6022e-01 1 insignificant 7.0473e-02 0.793037 insignificant 7.6601e-01 1 insignificant 0.0236278 5.5590e-01 lowCoverage 1.0000e+00 lowCoverage 0.651767 0.694236 0.00836674 5 0.631013 0.610702 0.0203108 5.1723e-01 0.55471532 insignificant 1.0000e+00 1.00000 insignificant 4.7098e-01 7.9021e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0287839 4.7541e-01 lowCoverage 1.0000000 lowCoverage 0.694045 0.6416382 0.0472519 4 0.632772 0.5911979 0.0415739 7.8987e-02 0.8407392 lowCoverage 6.8093e-01 1 lowCoverage 1.8686e-01 0.90905 lowCoverage 1.0000e+00 1 lowCoverage 5.6431e-02 2.6977e-01 lowCoverage 1.0000e+00 lowCoverage 0.694045 0.694236 5.9250e-03 4 0.632772 0.610702 0.0220697 5.4667e-01 0.7624241 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.0726e-01 0.71563013 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0040194 9.3593e-01 lowCoverage 1.000000 lowCoverage 0.6416382 0.694236 -0.0401164 5 0.59120 0.610702 -0.0195042 6.5917e-01 1.1271e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.88676542 6.6064e-02 insignificant 1.00000 8.3626e-01 insignificant -0.05241163 2.5158e-01 lowCoverage 1.00000000 lowCoverage chr17 21195702 21196702 141295 MAP2K3 ENSG00000034152 0.843714 227 10 0.748781 316 10 0.784201 279 11 0.838819 168 10 0.695423 84 7 0.797244 328 11 0.646032 91 5 0.690525 120 6 0.604711 109 6 0.730126 85 6 0.68194 132 6 0.4680272 63 3 0.7264194 109 6 0.648148 30 3 0.789377 106 6 0.7115385 25 3 0.8169082 80 3 0.63723 125 10 0.784587 180 6 0.76808 270 10 0.46984 103 6 0.862839 71 6 0.692401 179 9 0.733792 103 5 0.85450 45 6 0.788833 299 10 0.669167 99 6 0.640344 69 6 0.830829 138 6 0.674242 263 10 0.810071 411 10 0.81925 311 11 0.683830 243 10 0.3821995 73 6 0.6322944 314 9 0.784146 74 5 0.709423 102 7 0.66759 253 10 0.798310 273 10 0.809407 215 11 0.854259 163 10 0.790221 320 10 0.878996 200 11 0.878509 0.779967 0.792767 0.801011 0.857353 0.849067 0.711327 0.764721 0.746831 0.863712 0.875745 0.661966 0.880364 0.809429 0.877928 0.8013121 0.797261 0.751921 0.864613 0.830475 0.692293 0.838033 0.864363 0.802904 0.875042 0.848311 0.680809 0.754306 0.874017 0.849507 0.852340 0.839871 0.552250 0.4742655 0.70917400 0.6776390 0.853219 0.766635 0.790148 0.846787 0.768892 0.752074 0.845494 5 0.844680 0.844572 0.00542889 10 0.730427 0.678783 0.0516442 0.1366125 0.80755097 insignificant 1 1.000000 insignificant 0.215330 0.90634432 insignificant 1 1.00000 insignificant -0.01658344 0.674418 insignificant 1 insignificant 0.845442 0.7204910 0.1347286 10 0.755845 0.61713 0.1387139 2.1616e-05 0.9994227 weaklyHypermeth 3.4312e-04 1 weaklyHypermeth 1.2591e-02 0.996546 weaklyHypermeth 1.9371e-01 1 insignificant 0.0773444 2.4067e-01 insignificant 1.0000e+00 insignificant 0.845442 0.851409 0.01439332 10 0.755845 0.802464 -0.0466192 2.0556e-01 0.14363184 insignificant 1.0000e+00 1.00000 insignificant 5.0610e-01 6.6097e-01 insignificant 1.0000e+00 1.000000 insignificant -0.1056469 1.0913e-03 weaklyHypometh 0.0992109 weaklyHypometh 0.845381 0.7204910 0.1285054 10 0.730997 0.6171310 0.1138664 1.1943e-03 0.9999653 weaklyHypermeth 1.6822e-02 1 weaklyHypermeth 1.2775e-01 0.99348 insignificant 1.0000e+00 1 insignificant 9.3928e-02 1.8517e-01 insignificant 1.0000e+00 insignificant 0.845381 0.851409 5.4413e-03 10 0.730997 0.802464 -0.0714668 3.7759e-01 0.2945766 insignificant 1.0000e+00 1.00000 insignificant 7.1995e-01 0.37949137 insignificant 1.0000e+00 1.00000 insignificant -0.0890635 3.0752e-02 weaklyHypometh 1.000000 insignificant 0.7204910 0.851409 -0.1345712 10 0.61713 0.802464 -0.1853331 9.9999e-01 4.4636e-02 weaklyHypometh 1.0000e+00 4.8517e-01 insignificant 0.99997318 2.1425e-01 insignificant 1.00000 1.0000e+00 insignificant -0.18299133 2.1137e-02 weaklyHypometh 0.48165628 insignificant chr17 22901291 22902291 141332 ENSG00000214781 0.947302 172 5 0.948485 57 5 0.920000 24 4 0.896423 143 5 1.000000 12 2 0.936527 158 5 0.753333 23 2 0.883333 38 5 0.971429 25 3 0.890556 32 5 0.86834 125 5 0.9500000 14 0 0.8955599 93 5 NA 0 0 0.917949 53 5 0.9000000 15 0 0.9333333 14 0 0.96766 143 5 0.896364 89 5 0.87861 125 5 0.93000 38 4 0.923754 79 5 0.878361 81 5 0.875000 27 3 0.91923 55 5 0.922711 79 5 0.877607 69 5 1.000000 13 0 0.851044 44 5 0.891373 50 4 0.912306 97 5 0.92784 165 5 0.782619 34 5 0.9433333 88 5 0.8394926 221 5 0.855944 45 3 0.911111 34 3 0.92455 82 5 0.927607 73 5 0.883077 107 5 0.886742 100 5 0.930643 83 5 0.951166 121 5 0.947647 0.955948 0.923457 0.889819 0.949118 0.933236 0.781070 0.923868 0.964727 0.905007 0.888180 0.938272 0.891895 NA 0.907249 0.9382716 0.958848 0.975644 0.909091 0.868246 0.953704 0.929502 0.890497 0.907407 0.929606 0.920454 0.899964 1.000000 0.824651 0.906076 0.919067 0.927269 0.803939 0.9522634 0.80517933 0.8221532 0.890261 0.919518 0.930828 0.877873 0.870757 0.938777 0.944761 0 0.913653 0.909661 0.00184372 5 0.913927 0.911867 0.0020603 0.2328834 0.56083449 insignificant 1 1.000000 insignificant 0.121033 0.58286650 insignificant 1 1.00000 insignificant 0.00433000 0.793967 lowCoverage 1 lowCoverage 0.913653 0.8630952 0.0432369 5 0.913927 0.87309 0.0408387 9.3898e-02 0.1716748 insignificant 8.0255e-01 1 insignificant 3.0800e-01 0.393756 insignificant 1.0000e+00 1 insignificant 0.0372575 2.1720e-01 lowCoverage 1.0000e+00 lowCoverage 0.913653 0.915289 -0.00223254 5 0.913927 0.916306 -0.0023789 4.1596e-01 0.31637409 insignificant 1.0000e+00 1.00000 insignificant 2.5760e-01 4.3878e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0024149 8.9528e-01 lowCoverage 1.0000000 lowCoverage 0.909661 0.8630952 0.0381395 5 0.911867 0.8730886 0.0387784 1.8795e-01 0.0557469 insignificant 1.0000e+00 1 insignificant 5.7922e-01 0.17915 insignificant 1.0000e+00 1 insignificant 3.2928e-02 2.6593e-01 lowCoverage 1.0000e+00 lowCoverage 0.909661 0.915289 -7.4052e-03 5 0.911867 0.916306 -0.0044392 2.3495e-01 0.1846064 insignificant 1.0000e+00 1.00000 insignificant 3.4836e-01 0.23054510 insignificant 1.0000e+00 1.00000 insignificant -0.0067449 7.0533e-01 lowCoverage 1.000000 lowCoverage 0.8630952 0.915289 -0.0508885 5 0.87309 0.916306 -0.0432176 6.6912e-01 3.3127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.63116442 6.6984e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03967245 1.9966e-01 lowCoverage 1.00000000 lowCoverage chr17 23443986 23444986 141370 ENSG00000210020 0.721000 74 5 0.628439 126 5 0.680000 31 5 0.655844 109 5 0.657576 38 3 0.728303 135 5 0.733333 18 2 0.647059 58 3 0.458333 17 0 0.871429 25 3 0.75221 150 5 0.5000000 7 0 0.7833333 40 3 0.580000 23 3 0.733333 15 0 0.5674603 25 3 NA 0 0 0.65476 74 5 0.892857 29 3 0.72222 50 2 0.50000 6 0 1.000000 3 0 0.729412 40 2 0.624444 25 2 0.68214 27 2 0.823529 94 5 0.950000 13 0 0.500000 16 0 0.643810 29 4 0.662735 81 5 0.711282 97 5 0.71088 104 5 0.758942 68 5 0.7285714 38 5 0.6555556 70 5 0.333333 3 0 0.584615 30 2 0.69577 76 5 0.775685 151 2 0.771429 112 5 0.714007 120 5 0.900000 7 0 0.714414 92 5 0.726429 0.578893 0.628571 0.630798 0.588745 0.697359 0.690476 0.768908 0.535714 0.836735 0.741151 0.571429 0.773810 0.485714 0.738095 0.6292517 NA 0.765306 0.887755 0.710317 0.544558 0.748267 0.684874 0.534921 0.617347 0.777311 0.964286 0.547619 0.593197 0.531355 0.711355 0.678552 0.811476 0.7525510 0.61111111 0.6184335 0.692308 0.866213 0.750978 0.775510 0.704534 0.857143 0.711068 0 0.686782 0.661682 0.02611794 5 0.598731 0.689850 -0.0911185 0.4737525 0.44079714 insignificant 1 1.000000 insignificant 0.632760 0.36367063 insignificant 1 1.00000 insignificant -0.02902048 0.575742 lowCoverage 1 lowCoverage 0.686782 0.7929825 -0.0980503 5 0.598731 0.64348 -0.0447448 3.4463e-01 0.0070742 weaklyHypometh 1.0000e+00 1 insignificant 1.8813e-01 0.275505 insignificant 1.0000e+00 1 insignificant 0.0563686 4.3861e-01 lowCoverage 1.0000e+00 lowCoverage 0.689423 0.717842 -0.04568088 5 0.718477 0.738983 -0.0205061 2.8036e-01 0.08408152 insignificant 1.0000e+00 1.00000 insignificant 7.4963e-01 6.4723e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0926076 5.6240e-02 lowCoverage 1.0000000 lowCoverage 0.661682 0.7929825 -0.1389160 5 0.689850 0.6434758 0.0463737 2.4983e-01 0.0042337 weaklyHypometh 1.0000e+00 1 insignificant 1.0218e-01 0.15080 insignificant 1.0000e+00 1 insignificant 8.5389e-02 2.9615e-01 lowCoverage 1.0000e+00 lowCoverage 0.661654 0.717842 -7.1928e-02 5 0.694486 0.738983 -0.0444972 2.7069e-01 0.0229367 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.0746e-01 0.06082002 insignificant 1.0000e+00 1.00000 insignificant -0.0635871 2.7267e-01 lowCoverage 1.000000 lowCoverage 0.7957746 0.717842 0.0726510 5 0.77217 0.738983 0.0331876 1.7828e-02 1.6046e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.23073688 1.4248e-01 insignificant 1.00000 1.0000e+00 insignificant -0.14897612 7.4932e-02 lowCoverage 1.00000000 lowCoverage chr17 23651001 23652001 141384 ENSG00000203478 0.722857 57 5 0.749695 47 5 0.683333 28 4 0.792593 47 5 0.580000 35 5 0.843803 68 5 0.346814 35 1 0.686111 42 5 0.571429 35 5 0.686111 44 5 0.52216 170 5 0.6000000 5 1 0.6950000 46 5 0.680000 44 4 0.485714 31 5 0.8000000 10 0 0.4166667 13 0 0.64097 65 6 0.725000 36 4 0.76071 35 4 0.75000 4 0 0.800000 9 0 0.590000 26 1 0.850000 21 1 0.88333 29 3 0.654701 61 5 0.866667 14 1 0.800000 8 0 0.733333 38 5 0.675758 53 5 0.734167 69 5 0.72364 31 5 0.624501 79 5 0.6406061 50 5 0.8030372 74 5 1.000000 4 0 0.291176 34 2 0.66842 75 5 0.680000 35 5 0.785714 59 5 0.750183 110 5 0.843750 27 1 0.738945 80 5 0.786555 0.773564 0.692810 0.792302 0.627451 0.801911 0.622068 0.690632 0.635854 0.721133 0.781008 NA 0.708333 0.754902 0.550700 0.8529412 0.604417 0.891721 0.784858 0.821429 NA 0.803922 0.611765 0.901961 0.875817 0.693648 0.842861 0.803922 0.771242 0.731135 0.765523 0.746881 0.662868 0.6375520 0.79483289 NA 0.418685 0.698364 0.705882 0.793768 0.769662 0.852941 0.749735 0 0.713303 0.727273 -0.00784361 5 0.705597 0.715602 -0.0100047 0.6490619 0.54259580 insignificant 1 1.000000 insignificant 0.980759 0.06208653 insignificant 1 1.00000 insignificant -0.10568437 0.010961 lowCoverage 1 lowCoverage 0.711364 0.6803797 0.0421130 5 0.671331 0.55742 0.1139101 1.1124e-02 0.8907262 weaklyHypermeth 1.2224e-01 1 insignificant 5.1213e-02 0.877573 insignificant 5.8867e-01 1 insignificant -0.0218418 8.3400e-01 lowCoverage 1.0000e+00 lowCoverage 0.703247 0.781350 -0.05560023 5 0.539213 0.784730 -0.2455179 9.7169e-01 0.05342783 insignificant 1.0000e+00 1.00000 insignificant 9.9321e-01 2.2961e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.1102700 1.4528e-02 lowCoverage 0.6603443 lowCoverage 0.727273 0.6825397 0.0512724 5 0.715602 0.6689051 0.0466968 6.6815e-02 0.8420043 insignificant 5.8610e-01 1 insignificant 1.5427e-02 0.96679 weaklyHypermeth 2.2358e-01 1 insignificant 8.3843e-02 4.3011e-01 lowCoverage 1.0000e+00 lowCoverage 0.727273 0.781046 -3.6229e-02 5 0.715602 0.755569 -0.0399668 8.9295e-01 0.2020460 insignificant 1.0000e+00 1.00000 insignificant 6.6450e-01 0.55046528 insignificant 1.0000e+00 1.00000 insignificant -0.0045856 9.0441e-01 lowCoverage 1.000000 lowCoverage 0.6803797 0.782468 -0.0939385 5 0.55742 0.796307 -0.2388863 9.6717e-01 4.2779e-02 weaklyHypometh 1.0000e+00 4.7010e-01 insignificant 0.99655240 2.6917e-02 weaklyHypometh 1.00000 4.2725e-01 insignificant -0.08842812 4.0803e-01 lowCoverage 1.00000000 lowCoverage chr17 23856905 23857905 141393 ENSG00000203466 0.865811 374 9 0.779600 428 9 0.787279 347 9 0.907097 323 8 0.594942 207 8 0.756156 449 11 0.749226 329 9 0.841782 373 11 0.671776 283 8 0.906481 332 9 0.83905 522 11 0.7438504 230 9 0.9234900 325 9 0.822809 68 3 0.885217 362 9 0.8474980 192 8 0.8148185 126 7 0.79984 369 8 0.868905 468 11 0.82015 312 9 0.90682 127 8 0.783906 118 6 0.883279 266 9 0.653650 198 8 0.91082 168 8 0.877057 462 10 0.828077 196 11 0.848410 159 8 0.863233 327 11 0.760439 426 11 0.906885 761 11 0.76962 387 9 0.332949 356 11 0.5397103 262 11 0.6134191 199 6 0.408333 89 9 0.440951 255 10 0.56385 425 10 0.831213 404 8 0.805511 372 9 0.868131 323 8 0.886317 356 8 0.902046 393 8 0.849865 0.772346 0.859147 0.908492 0.809037 0.866703 0.901291 0.850849 0.856273 0.930364 0.863430 0.833513 0.926176 0.827676 0.897987 0.8762679 0.809528 0.816983 0.883433 0.841496 0.860409 0.805989 0.856521 0.820483 0.906349 0.895252 0.821922 0.905562 0.904139 0.912067 0.919669 0.884514 0.391466 0.4700161 0.56853018 0.3735855 0.450505 0.554921 0.888746 0.862088 0.892486 0.884330 0.849843 6 0.857744 0.885953 -0.02573989 9 0.789353 0.735570 0.0537824 0.9588356 0.01288738 weaklyHypometh 1 0.954119 insignificant 0.974732 0.03903515 weaklyHypometh 1 1.00000 insignificant -0.02139427 0.465720 insignificant 1 insignificant 0.857767 0.5000000 0.3607448 9 0.785688 0.43827 0.3474197 4.4123e-47 0.9999999 hypermethylated 2.2061e-44 1 hypermethylated 5.0042e-16 0.999994 hypermethylated 5.0042e-13 1 hypermethylated 0.3280873 2.4132e-04 hypermethylated 1.2701e-02 hypermethylated 0.858012 0.883658 -0.01999095 8 0.826811 0.857160 -0.0303488 9.3759e-01 0.00566048 weaklyHypometh 1.0000e+00 0.80864 insignificant 9.7492e-01 4.3840e-03 weaklyHypometh 1.0000e+00 0.661436 insignificant -0.0473549 8.4051e-02 insignificant 1.0000000 insignificant 0.886199 0.5000000 0.3862015 9 0.796868 0.4382680 0.3585999 1.1627e-35 1.0000000 hypermethylated 3.8757e-33 1 hypermethylated 7.5358e-14 0.99998 hypermethylated 3.7679e-11 1 hypermethylated 3.4948e-01 1.1219e-04 hypermethylated 7.0122e-03 hypermethylated 0.886446 0.883658 6.8116e-03 8 0.869310 0.857160 0.0121508 1.9514e-01 0.1255782 insignificant 1.0000e+00 1.00000 insignificant 5.5456e-01 0.15939654 insignificant 1.0000e+00 1.00000 insignificant -0.0259606 3.7978e-01 insignificant 1.000000 insignificant 0.5006313 0.883658 -0.3838960 8 0.47811 0.857160 -0.3790491 1.0000e+00 3.1873e-20 hypomethylated 1.0000e+00 3.1873e-17 hypomethylated 0.99999999 2.7439e-10 hypomethylated 1.00000 2.7439e-07 hypomethylated -0.37544224 1.2641e-04 hypomethylated 0.01857477 hypomethylated chr17 24096257 24097257 141408 TRAF4 ENSG00000076604 0.066452 357 12 0.032680 345 13 0.085988 363 13 0.033932 409 12 0.164050 317 10 0.085046 602 14 0.116477 469 14 0.084556 418 14 0.076462 710 15 0.048633 683 12 0.24754 408 13 0.1038107 460 13 0.1323069 509 14 0.059709 365 12 0.091427 555 12 0.0675319 444 13 0.0371423 601 13 0.21904 524 12 0.095009 376 13 0.13919 496 13 0.10768 276 12 0.101539 459 13 0.119372 368 13 0.116518 275 13 0.10390 270 12 0.096006 466 15 0.075864 337 12 0.104311 377 13 0.139351 343 15 0.065005 492 12 0.049800 607 14 0.11767 631 14 0.127270 366 11 0.0987467 250 12 0.0835897 389 12 0.017883 116 8 0.123235 324 14 0.10343 370 10 0.074332 503 12 0.099194 398 11 0.033006 385 11 0.079072 338 9 0.180277 419 12 0.040647 0.040953 0.055517 0.027578 0.032880 0.079733 0.033029 0.053238 0.023701 0.016763 0.064688 0.017056 0.014153 0.024986 0.014972 0.0080751 0.012686 0.064746 0.017508 0.081352 0.034173 0.028399 0.055037 0.063882 0.044021 0.033272 0.042789 0.056667 0.043540 0.038656 0.022032 0.054539 0.066688 0.0261872 0.01640212 0.0097861 0.105790 0.038040 0.023499 0.051522 0.027677 0.017645 0.054785 10 0.041653 0.047949 -0.00186318 12 0.128105 0.107703 0.0204019 0.4596974 0.51214879 insignificant 1 1.000000 insignificant 0.668055 0.70868344 insignificant 1 1.00000 insignificant -0.00040130 0.978594 insignificant 1 insignificant 0.041658 0.0424242 0.0032950 12 0.133928 0.10648 0.0274459 7.7007e-02 0.9749569 insignificant 7.0006e-01 1 insignificant 4.3118e-01 0.947054 insignificant 1.0000e+00 1 insignificant 0.0069905 7.4253e-01 insignificant 1.0000e+00 insignificant 0.041662 0.031326 0.00108405 12 0.140305 0.105791 0.0345143 5.0205e-02 0.76083785 insignificant 1.0000e+00 1.00000 insignificant 6.7116e-02 8.9862e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0061736 8.2937e-01 insignificant 1.0000000 insignificant 0.047959 0.0424242 0.0070172 12 0.112599 0.1064819 0.0061166 5.8239e-01 0.9381274 insignificant 1.0000e+00 1 insignificant 6.8643e-01 0.96035 insignificant 1.0000e+00 1 insignificant 7.3918e-03 6.9078e-01 insignificant 1.0000e+00 insignificant 0.047969 0.031326 3.0703e-03 12 0.117960 0.105791 0.0121694 1.6622e-01 0.3963100 insignificant 1.0000e+00 1.00000 insignificant 1.8291e-01 0.67778146 insignificant 1.0000e+00 1.00000 insignificant 0.0065749 8.0624e-01 insignificant 1.000000 insignificant 0.0424476 0.031326 0.0027351 12 0.11155 0.105791 0.0057615 7.7230e-01 9.9036e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.96442885 9.9900e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00081692 9.7847e-01 insignificant 1.00000000 insignificant chr17 24096507 24097507 141409 TRAF4 ENSG00000076604 0.053494 197 6 0.062446 143 7 0.080284 193 7 0.067864 268 6 0.091346 143 4 0.151385 346 7 0.031865 201 7 0.039433 218 7 0.019783 376 7 0.026958 398 6 0.23624 195 6 0.0096675 247 7 0.0045593 273 6 0.033990 222 6 0.088503 290 6 0.0072998 280 7 0.0075158 267 6 0.12169 340 6 0.026586 129 6 0.10526 252 7 0.19388 117 6 0.032355 272 6 0.034954 210 6 0.201828 135 6 0.05303 164 6 0.050061 213 7 0.032731 182 6 0.068381 172 6 0.036832 162 7 0.075274 249 6 0.039934 290 7 0.13574 363 6 0.121106 171 4 0.0515306 141 7 0.0317308 186 6 0.033211 83 6 0.113280 90 6 0.18873 173 5 0.036094 305 6 0.093712 252 6 0.070727 288 6 0.037879 231 6 0.088881 273 6 0.052474 0.057983 0.083775 0.049079 0.042373 0.119389 0.035387 0.053903 0.021008 0.024706 0.105014 0.011566 0.011660 0.029066 0.018780 0.0081673 0.013263 0.069553 0.026791 0.114687 0.056312 0.034566 0.038063 0.103399 0.049581 0.054520 0.051557 0.057188 0.044264 0.066020 0.039210 0.090257 0.099881 0.0404224 0.02919021 0.0174159 0.165959 0.055291 0.038696 0.083075 0.049256 0.031402 0.066594 5 0.045601 0.057335 -0.00948088 6 0.059526 0.095885 -0.0363593 0.8010030 0.00804419 weaklyHypometh 1 0.731290 insignificant 0.808866 0.03382940 weaklyHypometh 1 1.00000 insignificant -0.01627471 0.471071 insignificant 1 insignificant 0.045601 0.0545024 -0.0112753 6 0.059526 0.07377 -0.0142446 8.2713e-01 0.3501824 insignificant 1.0000e+00 1 insignificant 7.4895e-01 0.334754 insignificant 1.0000e+00 1 insignificant -0.0266224 3.7872e-01 insignificant 1.0000e+00 insignificant 0.045601 0.035582 -0.00121244 6 0.059526 0.055262 0.0042639 3.6774e-01 0.45310996 insignificant 1.0000e+00 1.00000 insignificant 3.4501e-01 6.4488e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0021502 9.0584e-01 insignificant 1.0000000 insignificant 0.057335 0.0545024 0.0034319 6 0.095885 0.0737707 0.0221148 4.1293e-01 0.3836454 insignificant 1.0000e+00 1 insignificant 3.2605e-01 0.44878 insignificant 1.0000e+00 1 insignificant -1.0348e-02 7.4632e-01 insignificant 1.0000e+00 insignificant 0.057335 0.035582 3.5585e-03 6 0.095885 0.055262 0.0406232 1.0333e-01 0.5146595 insignificant 1.0000e+00 1.00000 insignificant 1.7522e-01 0.52039889 insignificant 1.0000e+00 1.00000 insignificant 0.0141245 5.2615e-01 insignificant 1.000000 insignificant 0.0545024 0.035582 0.0042218 6 0.07377 0.055262 0.0185085 5.0705e-01 9.6114e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.78711645 9.1369e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02447227 4.1377e-01 insignificant 1.00000000 insignificant chr17 24475270 24476270 141460 TIAF1 ENSG00000221995 0.894777 170 6 0.786609 224 6 0.854487 139 5 0.957251 123 5 0.875331 101 5 0.923293 272 6 0.942948 178 5 0.872479 176 6 0.858880 109 6 0.965047 138 5 0.86517 251 6 0.8401190 105 3 0.9362440 167 6 0.944444 28 2 0.811002 126 5 0.8957912 82 3 0.9090334 123 3 0.93120 213 5 0.917284 299 6 0.92145 244 6 0.96094 146 6 0.733333 9 0 0.884710 128 6 0.972222 89 6 1.00000 12 0 0.952074 271 6 0.878667 180 6 0.952160 72 4 0.930214 243 5 0.931259 250 6 0.937576 420 6 0.90406 321 6 0.857334 197 6 0.8807745 213 6 0.7395597 197 4 0.916667 25 2 0.816506 102 6 0.70699 311 6 0.955759 156 6 0.925009 264 6 0.970413 78 4 0.800000 77 6 0.922693 123 5 0.903477 0.809049 0.840624 0.958630 0.868152 0.908859 0.921980 0.890439 0.851039 0.956885 0.859522 0.863497 0.925544 0.927609 0.889179 0.8835956 0.887313 0.920365 0.904035 0.921692 0.952371 0.897378 0.894272 0.948925 0.993604 0.947766 0.877318 0.944444 0.918341 0.930026 0.936804 0.927220 0.892932 0.8684854 0.76504791 0.8459700 0.873726 0.834764 0.940519 0.943185 0.971367 0.798387 0.915106 2 0.897185 0.922466 -0.02395885 6 0.901656 0.924335 -0.0226795 0.9774343 0.00317715 weaklyHypometh 1 0.353017 insignificant 0.991321 0.00353379 weaklyHypometh 1 1.00000 insignificant -0.02462658 0.289585 lowCoverage 1 lowCoverage 0.897185 0.8095694 0.0860450 6 0.901656 0.79356 0.1080984 1.2683e-05 0.5975972 weaklyHypermeth 2.0456e-04 1 weaklyHypermeth 3.8985e-02 0.567995 weaklyHypermeth 4.8731e-01 1 insignificant 0.0755027 7.5150e-02 insignificant 1.0000e+00 insignificant 0.897185 0.906877 -0.02589504 6 0.901656 0.932115 -0.0304590 9.7877e-01 0.00788394 weaklyHypometh 1.0000e+00 0.87599 insignificant 9.8233e-01 1.6390e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0196331 5.6601e-01 insignificant 1.0000000 insignificant 0.922466 0.8095694 0.1135769 6 0.924335 0.7935576 0.1307779 4.2162e-06 0.7897198 weaklyHypermeth 8.3020e-05 1 weaklyHypermeth 1.5757e-03 0.97659 weaklyHypermeth 3.4255e-02 1 weaklyHypermeth 1.0013e-01 3.1039e-02 lowCoverage 5.3515e-01 lowCoverage 0.922466 0.906877 -3.5108e-03 6 0.924335 0.932115 -0.0077795 8.9106e-01 0.0922615 insignificant 1.0000e+00 1.00000 insignificant 8.5955e-01 0.12061427 insignificant 1.0000e+00 1.00000 insignificant 0.0049934 8.9324e-01 lowCoverage 1.000000 lowCoverage 0.8095694 0.906877 -0.1483885 6 0.79356 0.932115 -0.1385574 9.7716e-01 2.3035e-03 weaklyHypometh 1.0000e+00 4.3461e-02 weaklyHypometh 0.99359280 6.5033e-03 weaklyHypometh 1.00000 1.6675e-01 insignificant -0.09513587 6.3837e-02 insignificant 1.00000000 insignificant chr17 24478727 24479727 141461 TIAF1 ENSG00000221995 0.891090 191 12 0.818162 298 12 0.801303 184 6 0.831275 151 11 0.786707 116 7 0.884784 247 12 0.644305 169 7 0.805513 209 12 0.904167 177 9 0.828802 146 12 0.93792 462 12 0.6275657 131 4 0.8684862 255 12 0.847222 36 3 0.868554 224 9 0.9762583 160 4 0.9428374 145 3 0.91644 177 9 0.921980 401 12 0.85361 276 12 0.83318 162 9 0.721111 107 9 0.845592 197 9 0.782899 135 9 0.96111 62 4 0.826611 345 12 0.820930 173 12 0.742134 92 4 0.825313 194 12 0.880938 284 12 0.924150 386 12 0.90941 310 12 0.799889 203 9 0.7781231 283 12 0.8717334 202 5 0.827652 74 9 0.858564 166 11 0.87203 220 12 0.847758 166 11 0.905922 269 12 0.830469 133 11 0.842361 117 10 0.863748 119 10 0.871893 0.825606 0.881538 0.850751 0.851282 0.907778 0.780632 0.839538 0.923515 0.916154 0.924540 0.712561 0.875642 0.885412 0.912614 0.9629866 0.958722 0.929518 0.929741 0.866442 0.905593 0.715328 0.917940 0.874899 0.913791 0.807328 0.816797 0.828896 0.905322 0.864078 0.885088 0.900578 0.766797 0.6483062 0.79428844 0.8292603 0.839491 0.878908 0.852745 0.904365 0.856868 0.861335 0.899455 1 0.886883 0.877810 0.01108518 12 0.827057 0.803035 0.0240216 0.1302497 0.81929736 insignificant 1 1.000000 insignificant 0.292650 0.63078069 insignificant 1 1.00000 insignificant 0.00840061 0.771478 insignificant 1 insignificant 0.887497 0.8196864 0.0690320 12 0.875145 0.81196 0.0631802 2.9444e-06 0.2410518 weaklyHypermeth 4.9073e-05 1 weaklyHypermeth 1.5253e-01 0.081827 insignificant 1.0000e+00 1 insignificant 0.0131830 6.1231e-01 insignificant 1.0000e+00 insignificant 0.887497 0.838308 0.01253846 11 0.875145 0.866596 0.0085488 2.1663e-01 0.32300077 insignificant 1.0000e+00 1.00000 insignificant 5.3209e-01 2.4202e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0102029 6.7284e-01 insignificant 1.0000000 insignificant 0.878887 0.8196864 0.0570879 12 0.869955 0.8119646 0.0579901 3.8344e-03 0.5827796 weaklyHypermeth 4.7338e-02 1 weaklyHypermeth 1.1717e-01 0.10231 insignificant 1.0000e+00 1 insignificant 4.7824e-03 8.5731e-01 insignificant 1.0000e+00 insignificant 0.878887 0.838308 -1.4561e-05 11 0.869955 0.866596 0.0033587 6.2952e-01 0.2729989 insignificant 1.0000e+00 1.00000 insignificant 5.7108e-01 0.34363280 insignificant 1.0000e+00 1.00000 insignificant -0.0186035 4.5806e-01 insignificant 1.000000 insignificant 0.8196864 0.838308 -0.0709832 11 0.81196 0.866596 -0.0546314 3.8149e-01 1.3787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.40363985 2.9461e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02338594 2.8975e-01 insignificant 1.00000000 insignificant chr17 24478953 24479953 141462 TIAF1 ENSG00000221995 0.888278 56 5 0.914044 172 5 0.947126 151 5 0.948421 53 4 0.812807 87 5 0.934615 84 5 0.789855 133 5 0.928283 112 5 0.920000 131 5 0.789738 70 5 0.90855 248 5 0.8830808 110 3 0.8872918 116 5 0.794643 15 2 0.885386 168 5 0.9572650 139 3 0.9128096 128 3 0.90545 29 2 0.908703 253 5 0.91588 96 5 0.71771 104 5 0.611111 25 2 0.886366 122 5 0.881988 97 5 1.00000 6 0 0.874731 201 5 0.747727 60 5 0.744709 70 3 0.797531 118 5 0.927320 166 5 0.901048 250 5 0.94252 126 5 0.792262 117 5 0.8550000 109 5 0.8717334 202 5 0.960000 14 2 0.833411 122 5 0.86486 128 5 0.941754 64 4 0.931970 79 5 0.908333 34 4 0.900000 27 3 0.900000 32 3 0.904379 0.900647 0.950769 0.947368 0.842064 0.928816 0.943443 0.914024 0.928018 0.945763 0.906122 0.872516 0.895909 0.867195 0.913910 0.9652157 0.925260 0.902748 0.913992 0.906926 0.871883 0.633667 0.910134 0.891232 0.903664 0.869747 0.724101 0.881875 0.946167 0.926882 0.898742 0.941763 0.774190 0.8625000 0.86071581 0.9534884 0.852602 0.842025 0.924521 0.940627 0.913407 0.883721 0.854651 0 0.909826 0.890706 0.01953901 5 0.796594 0.741900 0.0546939 0.0694370 0.94806313 insignificant 1 1.000000 insignificant 0.079581 0.95616661 insignificant 1 1.00000 insignificant 0.05554736 0.130367 lowCoverage 1 lowCoverage 0.910950 0.8569364 0.0509153 5 0.905913 0.85089 0.0550188 1.4555e-02 0.9328009 weaklyHypermeth 1.5321e-01 1 insignificant 2.9922e-01 0.618633 insignificant 1.0000e+00 1 insignificant 0.0287343 2.9430e-01 lowCoverage 1.0000e+00 lowCoverage 0.910950 0.919492 -0.00968767 4 0.905913 0.923759 -0.0178457 7.4141e-01 0.15742082 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.8150e-01 1.0108e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0248002 1.0704e-01 lowCoverage 1.0000000 lowCoverage 0.892697 0.8569364 0.0367752 5 0.890280 0.8508941 0.0393861 1.1127e-01 0.8032984 insignificant 8.9017e-01 1 insignificant 6.8767e-01 0.23645 insignificant 1.0000e+00 1 insignificant -2.6813e-02 5.0807e-01 lowCoverage 1.0000e+00 lowCoverage 0.892697 0.919492 -2.5786e-02 4 0.890280 0.923759 -0.0334784 9.5071e-01 0.0558450 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.7833e-01 0.04536890 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0803476 3.3362e-02 lowCoverage 1.000000 lowCoverage 0.8569364 0.919492 -0.0712422 4 0.85089 0.923759 -0.0728645 9.4870e-01 6.8575e-02 lowCoverage 1.0000e+00 6.5937e-01 lowCoverage 0.96650156 1.8074e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.05353454 6.6821e-02 lowCoverage 1.00000000 lowCoverage chr17 25199533 25200533 141522 SSH2 ENSG00000141298 0.731420 107 4 0.745378 137 6 0.579405 62 5 0.779867 80 4 0.631898 55 5 0.752195 177 6 0.746944 50 4 0.737020 112 5 0.856039 50 4 0.687075 55 5 0.77870 137 5 0.7292929 35 2 0.8194444 69 5 0.916667 17 1 0.732143 61 4 0.5384615 22 1 0.6222222 18 1 0.74044 100 4 0.815679 102 5 0.79073 150 6 0.73611 20 1 0.593240 32 2 0.842532 77 4 0.847253 41 4 0.82011 35 4 0.689898 124 5 0.632623 68 4 0.678106 47 4 0.658497 101 5 0.716025 183 6 0.830433 157 5 0.76598 165 6 0.720419 93 5 0.7762897 88 5 0.7325000 56 4 0.700855 19 1 0.629784 92 5 0.60240 108 5 0.605407 84 5 0.695257 108 6 0.673230 50 4 0.732727 58 4 0.710359 94 4 0.706603 0.718182 0.648775 0.808271 0.758828 0.709299 0.778065 0.706709 0.757815 0.736718 0.803658 0.657851 0.840909 0.820485 0.611275 0.6071202 0.822574 0.691086 0.750505 0.802483 0.799587 0.683754 0.807194 0.752883 0.789059 0.806109 0.758780 0.696518 0.659859 0.756672 0.731655 0.701793 0.623636 0.6559179 0.66064050 0.7859775 0.558655 0.701723 0.732008 0.788248 0.670265 0.737966 0.815582 2 0.755639 0.762857 -0.00638373 5 0.743969 0.775657 -0.0316885 0.7802328 0.47601705 insignificant 1 1.000000 insignificant 0.758172 0.65192344 insignificant 1 1.00000 insignificant 0.00231748 0.943493 lowCoverage 1 lowCoverage 0.755668 0.6951754 0.0589886 5 0.742964 0.67675 0.0662185 2.0623e-02 0.9870667 weaklyHypermeth 2.1260e-01 1 insignificant 1.0691e-01 0.968584 insignificant 1.0000e+00 1 insignificant 0.0428436 2.2801e-01 lowCoverage 1.0000e+00 lowCoverage 0.755668 0.733503 -0.00029866 4 0.742964 0.672756 0.0702073 4.7846e-02 0.69201304 lowCoverage 1.0000e+00 1.00000 lowCoverage 1.3572e-01 7.2018e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0531550 9.9644e-02 lowCoverage 1.0000000 lowCoverage 0.762178 0.6951754 0.0662020 5 0.738267 0.6767453 0.0615217 4.0729e-03 0.9950522 weaklyHypermeth 4.9670e-02 1 weaklyHypermeth 3.6631e-02 0.94837 weaklyHypermeth 4.6368e-01 1 insignificant 4.0526e-02 2.8989e-01 lowCoverage 1.0000e+00 lowCoverage 0.762178 0.733503 7.4814e-03 4 0.738267 0.672756 0.0655105 1.6237e-01 0.6680297 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.1604e-01 0.68068285 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0508375 1.5010e-01 lowCoverage 1.000000 lowCoverage 0.6951754 0.733503 -0.0574138 4 0.67675 0.672756 0.0039888 6.7064e-01 3.8187e-02 lowCoverage 1.0000e+00 4.3394e-01 lowCoverage 0.46251771 1.5913e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.01031144 7.7199e-01 lowCoverage 1.00000000 lowCoverage chr17 25419783 25420783 141529 ENSG00000207011 0.980449 382 8 0.893025 179 8 0.885617 181 8 0.911560 197 6 0.871533 126 8 0.918811 255 8 0.837855 153 8 0.891811 159 8 0.880997 106 7 0.914241 128 8 0.93595 356 8 0.8545635 71 7 0.9678160 156 8 NA 0 0 0.892978 209 8 0.8008929 45 6 0.8391348 121 8 0.87737 251 8 0.952499 263 8 0.88788 326 8 0.89197 97 8 0.934522 124 6 0.903425 245 8 0.874370 102 8 0.93818 93 6 0.899302 243 8 0.879109 199 8 0.926737 76 6 0.893419 143 8 0.883232 181 8 0.945722 319 8 0.95346 417 8 0.837341 200 8 0.6939078 218 8 0.7500000 151 4 0.809602 128 6 0.844494 69 6 0.88128 191 8 0.943806 381 8 0.946410 418 8 0.933815 300 7 0.928018 281 8 0.953601 465 7 0.976072 0.921376 0.892030 0.950737 0.888124 0.911706 0.859753 0.883106 0.862599 0.909561 0.922963 0.897726 0.952303 NA 0.901398 0.8428571 0.813045 0.865770 0.953666 0.861880 0.915486 0.926643 0.906662 0.892883 0.929117 0.920246 0.885477 0.892537 0.907750 0.863877 0.937540 0.955359 0.818834 0.6663293 0.74276986 0.8030754 0.869813 0.866994 0.937725 0.945436 0.911872 0.935026 0.942047 5 0.907478 0.917374 -0.00870830 8 0.906130 0.914559 -0.0084292 0.8858355 0.43888185 insignificant 1 1.000000 insignificant 0.853991 0.43406361 insignificant 1 1.00000 insignificant -0.01581461 0.238323 insignificant 1 insignificant 0.907478 0.7941484 0.1157054 8 0.906130 0.80363 0.1025003 2.8996e-07 0.9000691 weaklyHypermeth 5.4710e-06 1 weaklyHypermeth 1.1325e-03 0.646875 weaklyHypermeth 2.3593e-02 1 weaklyHypermeth 0.0917020 2.0523e-02 weaklyHypermeth 3.8722e-01 insignificant 0.907478 0.931707 -0.02964589 8 0.906130 0.940409 -0.0342785 9.9771e-01 0.02235359 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9898e-01 4.6301e-03 weaklyHypometh 1.0000e+00 0.661436 insignificant -0.0466568 4.5943e-04 weaklyHypometh 0.0574292 weaklyHypometh 0.917374 0.7941484 0.1240672 8 0.914559 0.8036299 0.1109295 1.1913e-05 0.8651676 weaklyHypermeth 2.2477e-04 1 weaklyHypermeth 1.3887e-03 0.91207 weaklyHypermeth 3.0861e-02 1 weaklyHypermeth 1.0752e-01 1.0973e-02 weaklyHypermeth 2.6221e-01 insignificant 0.917374 0.931707 -1.9510e-02 8 0.914559 0.940409 -0.0258493 9.7693e-01 0.0145813 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8389e-01 0.01629239 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0308422 4.5280e-03 weaklyHypometh 0.565996 insignificant 0.7941484 0.931707 -0.1445423 8 0.80363 0.940409 -0.1367788 9.9691e-01 8.7067e-04 weaklyHypometh 1.0000e+00 1.8928e-02 weaklyHypometh 0.99886630 6.3790e-04 weaklyHypometh 1.00000 2.8996e-02 weaklyHypometh -0.13835881 4.0752e-03 weaklyHypometh 0.17718301 insignificant chr17 25922176 25923176 141546 ENSG00000219281 0.836776 583 9 0.779488 407 9 0.863523 334 9 0.938857 735 8 0.757330 187 9 0.909365 744 8 0.822979 258 8 0.900504 317 9 0.709651 211 9 0.918569 225 9 0.81649 637 9 0.8032174 137 9 0.8582424 315 9 0.909091 33 3 0.782371 239 9 0.5847159 108 7 0.6743867 147 7 0.89385 841 8 0.741334 620 9 0.93731 595 9 0.83186 128 9 0.871926 314 8 0.913456 412 9 0.815268 230 11 0.91349 274 8 0.913030 534 9 0.900876 235 9 0.880852 144 9 0.908668 411 9 0.791220 487 9 0.936295 691 9 0.84237 595 9 0.575720 338 9 0.6216674 310 12 0.6646824 268 8 0.622937 114 8 0.607670 211 9 0.69842 519 9 0.892339 574 9 0.938357 621 8 0.969754 643 8 0.915085 497 8 0.919517 625 8 0.926118 0.850486 0.865035 0.920806 0.825187 0.910629 0.824338 0.911808 0.862800 0.930517 0.921618 0.892478 0.965223 0.894904 0.934867 0.6886711 0.710876 0.895806 0.908571 0.933248 0.847317 0.920727 0.930562 0.954854 0.953734 0.928200 0.910883 0.923838 0.905783 0.939322 0.945614 0.926392 0.645528 0.7533462 0.70837365 0.7284781 0.827449 0.860823 0.909421 0.935462 0.957664 0.905101 0.933608 8 0.897172 0.925701 -0.03004987 9 0.771774 0.831951 -0.0601775 0.9957969 0.00014695 weaklyHypometh 1 0.048984 weaklyHypometh 0.992826 0.00019282 weaklyHypometh 1 0.19282 insignificant -0.05470714 0.037321 weaklyHypometh 1 insignificant 0.897235 0.7318182 0.1608719 9 0.769602 0.60372 0.1658805 2.4093e-19 0.9999318 weaklyHypermeth 1.8342e-17 1 weaklyHypermeth 1.0208e-05 0.999976 weaklyHypermeth 3.7808e-04 1 weaklyHypermeth 0.1900530 1.3922e-06 weaklyHypermeth 1.5469e-04 weaklyHypermeth 0.898287 0.925676 -0.02428223 8 0.804769 0.929153 -0.1243846 9.9939e-01 0.01790368 weaklyHypometh 1.0000e+00 1.00000 insignificant 1.0000e+00 2.6375e-04 weaklyHypometh 1.0000e+00 0.131874 insignificant -0.1051082 3.5960e-04 weaklyHypometh 0.0513709 weaklyHypometh 0.925685 0.7318182 0.1896059 9 0.819024 0.6037219 0.2153024 5.4339e-16 0.9998846 weaklyHypermeth 3.8814e-14 1 weaklyHypermeth 5.2376e-08 0.99997 weaklyHypermeth 6.5470e-06 1 weaklyHypermeth 2.4476e-01 3.5096e-07 hypermethylated 5.8494e-05 hypermethylated 0.928765 0.925676 6.9029e-03 8 0.909123 0.929153 -0.0200308 7.8245e-01 0.4514471 insignificant 1.0000e+00 1.00000 insignificant 8.7967e-01 0.65954449 insignificant 1.0000e+00 1.00000 insignificant -0.0504010 1.8875e-02 weaklyHypometh 1.000000 insignificant 0.7381924 0.925676 -0.1745048 8 0.62484 0.929153 -0.3043150 1.0000e+00 6.0298e-08 weaklyHypometh 1.0000e+00 4.0199e-06 weaklyHypometh 0.99999994 8.4515e-06 weaklyHypometh 1.00000 9.3906e-04 weaklyHypometh -0.29516122 4.1756e-07 hypomethylated 0.00041756 hypomethylated chr17 26126944 26127944 141564 ENSG00000197522 0.801675 252 5 0.646366 156 5 0.595928 117 4 0.682245 203 5 0.679348 76 3 0.814185 209 5 0.543779 97 3 0.639748 105 4 0.536922 81 4 0.624837 71 4 0.72865 213 5 0.6241758 51 4 0.7576803 121 5 0.840000 42 4 0.643791 65 4 0.6691919 34 3 0.6388889 22 3 0.64744 247 5 0.724444 100 4 0.73006 204 5 0.77511 61 5 0.585354 65 4 0.723692 160 5 0.677256 79 5 0.59766 121 4 0.682611 139 5 0.687531 98 5 0.549453 53 5 0.684598 143 4 0.722773 157 5 0.778045 151 5 0.59613 222 5 0.715235 145 4 0.6435403 106 4 0.7030556 89 5 0.682143 51 4 0.663304 100 5 0.63176 161 5 0.744619 159 5 0.559724 196 4 0.640592 181 5 0.767815 146 4 0.689977 205 5 0.729232 0.732593 0.632276 0.672240 0.595346 0.683205 0.665988 0.683331 0.673350 0.677156 0.673058 0.614190 0.662987 0.778641 0.719673 0.7056196 0.669464 0.654923 0.678722 0.704140 0.720239 0.751253 0.671980 0.686529 0.772961 0.763673 0.672235 0.601078 0.663090 0.755353 0.694458 0.620878 0.667507 0.5800334 0.59955502 0.6336512 0.595035 0.700168 0.712834 0.678504 0.643040 0.707355 0.729398 3 0.699919 0.736370 -0.00602910 5 0.655251 0.620849 0.0344013 0.5724091 0.60155266 insignificant 1 1.000000 insignificant 0.767896 0.43457947 insignificant 1 1.00000 insignificant 0.00678376 0.813410 lowCoverage 1 lowCoverage 0.699919 0.6671779 0.0374508 5 0.655251 0.64949 0.0057570 1.2661e-02 0.8178230 weaklyHypermeth 1.3569e-01 1 insignificant 4.6652e-02 0.655725 weaklyHypermeth 5.6207e-01 1 insignificant 0.0052950 8.1932e-01 lowCoverage 1.0000e+00 lowCoverage 0.699919 0.703495 -0.00594969 5 0.655251 0.665798 -0.0105475 3.9147e-01 0.32367787 insignificant 1.0000e+00 1.00000 insignificant 2.6813e-01 2.2238e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0020776 9.6190e-01 lowCoverage 1.0000000 lowCoverage 0.736370 0.6671779 0.0442011 5 0.620849 0.6494938 -0.0286443 3.4413e-02 0.6777173 weaklyHypermeth 3.3089e-01 1 insignificant 3.3422e-02 0.77718 weaklyHypermeth 4.3977e-01 1 insignificant -1.4888e-03 9.5405e-01 lowCoverage 1.0000e+00 lowCoverage 0.736370 0.703495 7.9085e-03 5 0.620849 0.665798 -0.0449489 3.3938e-01 0.5098079 insignificant 1.0000e+00 1.00000 insignificant 2.3642e-01 0.74518566 insignificant 1.0000e+00 1.00000 insignificant -0.0088614 8.4344e-01 lowCoverage 1.000000 lowCoverage 0.6671779 0.703495 -0.0423248 5 0.64949 0.665798 -0.0163045 2.5031e-01 1.4159e-02 weaklyHypometh 1.0000e+00 1.9404e-01 insignificant 0.38280972 4.2164e-02 weaklyHypometh 1.00000 5.9387e-01 insignificant -0.00737263 8.6015e-01 lowCoverage 1.00000000 lowCoverage chr17 26947481 26948481 141586 MIR365-2 ENSG00000199187 0.644043 132 7 0.575921 138 6 0.619683 107 3 0.695912 88 4 0.329067 55 3 0.734597 165 4 0.474339 45 3 0.651835 144 6 0.538691 76 5 0.577877 70 3 0.70337 176 6 0.2583333 31 3 0.3988341 227 6 0.746070 85 3 0.621985 159 6 0.1555556 72 3 0.5600000 9 1 0.38999 230 7 0.497040 236 6 0.47773 97 4 0.45128 54 6 0.421802 92 6 0.652551 98 4 0.831746 46 4 0.50261 85 6 0.762371 224 6 0.644506 129 4 0.700000 48 3 0.621667 140 6 0.752288 272 6 0.730902 302 6 0.72695 136 7 0.000000 232 6 0.0115440 114 6 0.0000000 139 4 0.000000 117 8 0.020443 206 6 0.11111 278 8 0.605084 124 4 0.569724 169 7 0.627732 101 6 0.362420 107 6 0.320594 149 7 0.593089 0.583462 0.534976 0.500328 0.578975 0.723659 0.585729 0.471101 0.584001 0.543878 0.693793 0.315858 0.377361 0.623988 0.482322 0.1733233 0.412573 0.295296 0.559023 0.587168 0.627942 0.274643 0.735367 0.741211 0.517929 0.628571 0.536917 0.438629 0.529802 0.646208 0.637347 0.750710 0.000000 0.0253166 0.00042481 0.0000000 0.012657 0.000000 0.426274 0.297841 0.341908 0.255278 0.211890 3 0.526721 0.624153 -0.09211743 6 0.583781 0.685262 -0.1014808 0.9998753 0.00121705 weaklyHypometh 1 0.173865 insignificant 0.997783 0.03851598 weaklyHypometh 1 1.00000 insignificant -0.11734521 0.032209 lowCoverage 1 lowCoverage 0.526900 0.0064457 0.5208694 6 0.592991 0.11400 0.4789878 1.6877e-29 0.9999975 hypermethylated 2.8127e-27 1 hypermethylated 9.7053e-14 1.000000 hypermethylated 4.8526e-11 1 hypermethylated 0.5086943 4.1830e-12 lowCoverage 1.3943e-09 lowCoverage 0.526900 0.344615 0.20228600 6 0.592991 0.540517 0.0524741 3.2189e-04 0.94700698 hypermethylated 1.5328e-02 1.00000 hypermethylated 3.7801e-03 9.7977e-01 weaklyHypermeth 2.3626e-01 1.000000 insignificant 0.0354331 6.4684e-01 lowCoverage 1.0000000 lowCoverage 0.624153 0.0046125 0.6198316 6 0.685262 0.0032535 0.6820088 2.3062e-40 1.0000000 hypermethylated 1.1531e-37 1 hypermethylated 4.5573e-15 1.00000 hypermethylated 4.5573e-12 1 hypermethylated 6.2604e-01 2.0313e-10 hypermethylated 1.0156e-07 hypermethylated 0.624153 0.343606 2.9465e-01 6 0.685262 0.483081 0.2021808 2.0873e-08 0.9957845 hypermethylated 2.9818e-06 1.00000 hypermethylated 7.8232e-06 0.99185560 hypermethylated 1.5646e-03 1.00000 hypermethylated 0.1527783 8.0612e-02 insignificant 1.000000 insignificant 0.0064457 0.344615 -0.3337744 7 0.11400 0.540517 -0.4265137 1.0000e+00 1.6517e-13 hypomethylated 1.0000e+00 8.2585e-11 hypomethylated 1.00000000 1.1830e-09 hypomethylated 1.00000 5.9148e-07 hypomethylated -0.47326118 1.2189e-03 weaklyHypometh 0.08706596 weaklyHypometh chr17 27847082 27848082 141622 CDK5R1 ENSG00000176749 0.954876 220 6 0.725495 113 6 0.793498 64 6 0.939951 196 6 0.805090 89 6 0.821007 220 6 0.858516 105 6 1.000000 65 6 0.855159 51 6 1.000000 37 6 0.94635 100 6 0.5833333 9 0 0.7261905 29 2 0.785714 32 4 0.734632 68 6 0.9166667 12 0 NA 0 0 0.80127 183 6 0.809483 197 6 0.95525 185 6 0.95238 52 6 0.927778 70 6 0.959184 74 6 0.904762 32 4 0.93087 333 6 0.850340 74 6 0.777778 57 6 0.892063 41 6 0.891691 71 6 0.867063 88 6 0.957626 143 6 0.92171 158 6 0.831263 74 6 0.7312852 117 6 0.2000000 141 4 0.708333 210 6 0.782913 57 6 0.80003 133 6 0.979440 156 6 0.879345 120 6 0.678539 133 6 0.892157 88 6 0.915671 175 6 0.959910 0.832861 0.930239 0.940292 0.945755 0.963521 0.956498 1.000000 0.871226 1.000000 0.949974 0.918455 0.837093 0.825994 0.883914 0.9022556 NA 0.819342 0.947708 0.944203 0.959900 0.926065 0.945757 0.892589 0.935870 0.858933 1.000000 0.853061 0.878589 0.971536 0.956940 0.936045 0.868538 0.8012069 0.24479605 0.7515664 0.924959 0.849141 0.964364 0.883455 0.897114 0.875719 0.908545 1 0.913837 0.930743 -0.01048285 6 0.845212 0.879815 -0.0346037 0.8850684 0.02021893 weaklyHypometh 1 1.000000 insignificant 0.942139 0.15225544 insignificant 1 1.00000 insignificant -0.06000927 0.051086 lowCoverage 1 lowCoverage 0.919816 0.6830601 0.2648402 6 0.933640 0.61915 0.3144852 1.1020e-10 0.8597594 hypermethylated 2.8256e-09 1 hypermethylated 2.7935e-03 0.635114 weaklyHypermeth 4.9978e-02 1 weaklyHypermeth 0.1671235 1.4875e-01 lowCoverage 1.0000e+00 lowCoverage 0.913793 0.911809 0.00649697 6 0.825863 0.745773 0.0800898 1.3157e-01 0.79588348 insignificant 1.0000e+00 1.00000 insignificant 3.0455e-01 9.4375e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0262686 6.5841e-01 lowCoverage 1.0000000 lowCoverage 0.930508 0.6830601 0.2605530 6 0.845477 0.6191545 0.2263225 1.4193e-07 0.8627407 hypermethylated 3.7351e-06 1 hypermethylated 8.6699e-03 0.76354 weaklyHypermeth 1.3762e-01 1 insignificant 2.2713e-01 6.5938e-02 insignificant 9.6967e-01 insignificant 0.930918 0.911940 2.2593e-02 6 0.879815 0.774021 0.1057946 5.6436e-02 0.9187558 insignificant 1.0000e+00 1.00000 insignificant 1.6152e-01 0.98159850 insignificant 1.0000e+00 1.00000 insignificant 0.0337406 5.5287e-01 insignificant 1.000000 insignificant 0.6830601 0.913174 -0.2304400 6 0.61915 0.852313 -0.2331580 5.5737e-01 5.1820e-04 hypomethylated 1.0000e+00 1.2955e-02 hypomethylated 0.29027816 5.1660e-02 insignificant 1.00000 7.0628e-01 insignificant -0.19339212 1.1782e-01 insignificant 1.00000000 insignificant chr17 29775628 29776628 141733 ENSG00000210356 0.130939 185 6 0.060935 165 7 0.286204 160 6 0.074490 139 6 0.210000 105 4 0.336402 411 7 0.077346 237 6 0.194255 242 6 0.285377 219 6 0.110780 122 6 0.24341 267 6 0.2187962 84 7 0.3420120 166 6 0.106413 56 3 0.111032 204 6 0.1197802 56 5 0.6533333 28 2 0.16496 184 6 0.526411 331 6 0.34826 335 7 0.11059 85 6 0.323825 136 6 0.185900 193 6 0.047268 131 5 0.13788 68 7 0.089901 297 6 0.124995 194 7 0.037037 101 5 0.293252 147 6 0.210464 362 6 0.609653 416 6 0.16855 295 6 0.025005 216 7 0.0079365 108 6 0.1428571 60 4 0.155280 65 4 0.038884 153 5 0.17948 281 7 0.394207 321 6 0.159288 235 6 0.206039 159 6 0.114700 219 6 0.078675 211 6 0.162651 0.082990 0.344929 0.083173 0.300343 0.168405 0.118346 0.207616 0.153334 0.137451 0.162447 0.227260 0.317901 0.150752 0.125353 0.1598662 0.425714 0.172310 0.455722 0.190655 0.116267 0.145542 0.106515 0.069123 0.189640 0.135531 0.086246 0.000000 0.277448 0.105028 0.684415 0.188023 0.032582 0.0056465 0.01841259 0.1881767 0.049098 0.100198 0.256558 0.185353 0.249341 0.145564 0.085373 5 0.209258 0.229278 -0.02189082 6 0.237148 0.238393 -0.0012448 0.9687098 0.76798411 insignificant 1 1.000000 insignificant 0.090043 0.99942124 insignificant 1 1.00000 insignificant 0.03511379 0.545251 insignificant 1 insignificant 0.209315 0.0453001 0.1613671 6 0.263498 0.08600 0.1774971 2.7693e-07 0.9999989 weaklyHypermeth 5.3345e-06 1 weaklyHypermeth 2.0997e-08 0.999999 weaklyHypermeth 1.9088e-06 1 weaklyHypermeth 0.1384831 8.0346e-03 weaklyHypermeth 2.0086e-01 insignificant 0.209315 0.188646 0.02069880 6 0.263498 0.241587 0.0219107 5.5879e-01 0.88618219 insignificant 1.0000e+00 1.00000 insignificant 7.2408e-01 6.4447e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0394748 5.6287e-01 insignificant 1.0000000 insignificant 0.229373 0.0453001 0.1798303 6 0.264881 0.0860004 0.1788803 1.3579e-03 0.9999966 weaklyHypermeth 1.8860e-02 1 weaklyHypermeth 1.6492e-04 0.99996 weaklyHypermeth 4.7121e-03 1 weaklyHypermeth 1.0337e-01 7.8165e-02 insignificant 1.0000e+00 insignificant 0.229373 0.188646 4.5023e-02 6 0.264881 0.241587 0.0232938 5.7587e-01 0.9260536 insignificant 1.0000e+00 1.00000 insignificant 9.9659e-01 0.20571203 insignificant 1.0000e+00 1.00000 insignificant 0.0043610 9.5261e-01 insignificant 1.000000 insignificant 0.0453001 0.188646 -0.1436339 6 0.08600 0.241587 -0.1555864 1.0000e+00 7.1177e-06 weaklyHypometh 1.0000e+00 2.3726e-04 weaklyHypometh 1.00000000 2.4009e-04 weaklyHypometh 1.00000 1.4123e-02 weaklyHypometh -0.09900832 1.6557e-01 insignificant 1.00000000 insignificant chr17 31211905 31212905 141810 TAF15 ENSG00000172660 0.876855 122 5 0.780254 80 4 0.666603 84 5 0.854424 98 4 0.836667 36 3 0.782420 234 5 0.855112 95 5 0.821641 101 5 0.791000 78 4 0.854135 58 4 0.91892 129 6 0.7652489 49 4 0.8505556 71 4 0.916667 8 0 0.818889 58 4 0.4940268 37 3 0.7704412 50 3 0.79614 58 3 0.793148 111 4 0.67596 193 5 0.88571 23 1 0.813409 47 4 0.771410 100 5 0.745714 43 4 0.75651 36 3 0.819412 131 6 0.834762 38 4 0.758929 32 3 0.681088 85 4 0.828320 153 5 0.813010 164 5 0.79479 230 5 0.735131 80 5 0.6900641 53 3 0.6131081 102 4 0.865476 43 4 0.864762 58 5 0.73229 129 4 0.808590 114 4 0.899743 98 3 0.870581 91 4 0.725843 106 4 0.876869 111 5 0.830615 0.757642 0.732166 0.821532 0.886621 0.826663 0.784231 0.795591 0.778435 0.828602 0.908320 0.814030 0.828156 0.854144 0.789569 0.6574616 0.668569 0.884712 0.817294 0.840460 0.873178 0.803649 0.765817 0.783382 0.770738 0.781945 0.792323 0.900389 0.814827 0.848780 0.848824 0.832732 0.841497 0.6186770 0.54127597 0.8585034 0.885811 0.781973 0.831163 0.855695 0.886312 0.839015 0.847561 3 0.802857 0.826248 -0.00126265 5 0.819642 0.787147 0.0324942 0.3804153 0.58729429 insignificant 1 1.000000 insignificant 0.196104 0.43224626 insignificant 1 1.00000 insignificant 0.00403343 0.879725 lowCoverage 1 lowCoverage 0.802857 0.7569892 0.0580561 4 0.819642 0.80503 0.0146129 8.2460e-02 0.7701782 lowCoverage 7.2974e-01 1 lowCoverage 3.0660e-01 0.525267 lowCoverage 1.0000e+00 1 lowCoverage 0.0458175 3.4764e-01 lowCoverage 1.0000e+00 lowCoverage 0.802857 0.800000 -0.04041586 4 0.819642 0.874367 -0.0547256 9.8066e-01 0.10116576 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.8899e-01 9.0055e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0403699 3.2001e-01 lowCoverage 1.0000000 lowCoverage 0.826248 0.7569892 0.0659199 4 0.787147 0.8050287 -0.0178813 4.8450e-02 0.5416411 lowCoverage 4.4861e-01 1 lowCoverage 5.1026e-02 0.81934 lowCoverage 5.6073e-01 1 lowCoverage 4.1784e-02 3.6978e-01 lowCoverage 1.0000e+00 lowCoverage 0.826248 0.800000 -4.3472e-02 4 0.787147 0.874367 -0.0872198 9.9859e-01 0.0361004 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9956e-01 0.03219495 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0444034 2.5151e-01 lowCoverage 1.000000 lowCoverage 0.7569892 0.800000 -0.0918172 4 0.80503 0.874367 -0.0693385 9.5086e-01 6.0860e-02 lowCoverage 1.0000e+00 6.2282e-01 lowCoverage 0.92754652 1.1732e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.08618746 1.2819e-01 lowCoverage 1.00000000 lowCoverage chr17 32299827 32300827 141863 ENSG00000223276 0.913993 72 5 0.787374 65 5 0.850906 84 5 0.830000 88 5 0.722114 50 5 0.889314 200 5 0.859654 70 5 0.835257 88 5 0.785955 88 5 0.899524 92 5 0.85933 115 5 0.9303030 40 5 0.9020468 110 5 0.840303 80 5 0.862162 103 5 0.7443590 40 5 0.9400000 25 2 0.69918 138 5 0.861134 155 5 0.86709 156 5 0.94333 34 4 0.829138 82 5 0.832212 102 5 0.682831 103 5 0.32308 29 2 0.849699 74 5 0.819310 77 5 0.922807 42 2 0.804787 85 5 0.878000 110 5 0.820897 141 5 0.88382 157 5 0.183352 139 5 0.4532967 39 2 0.0059524 84 2 0.066667 12 0 0.215685 162 5 0.39172 95 5 0.523383 103 5 0.701967 71 5 0.719913 44 5 0.809150 71 5 0.757738 90 5 0.902170 0.725719 0.812120 0.825321 0.657148 0.894051 0.766977 0.819218 0.778653 0.835836 0.862156 0.915307 0.863360 0.813384 0.870111 0.6421433 0.884615 0.749724 0.849372 0.837355 0.947436 0.747171 0.844921 0.667294 0.605523 0.858296 0.809019 0.946919 0.853783 0.843590 0.769035 0.860497 0.281281 0.3387574 0.03443702 0.1282051 0.199885 0.437839 0.584283 0.701027 0.808025 0.784942 0.744200 2 0.833244 0.827220 0.00333463 5 0.838846 0.835949 0.0028971 0.6462455 0.71455962 insignificant 1 1.000000 insignificant 0.350446 0.56876199 insignificant 1 1.00000 insignificant 0.04484076 0.381916 lowCoverage 1 lowCoverage 0.833244 0.2128060 0.6144498 5 0.838846 0.21264 0.6262012 7.0088e-46 1.0000000 hypermethylated 2.3363e-43 1 hypermethylated 1.1818e-12 1.000000 hypermethylated 3.9395e-10 1 hypermethylated 0.6245557 2.4042e-04 lowCoverage 1.2701e-02 lowCoverage 0.833244 0.699208 0.13227390 5 0.838846 0.692618 0.1462281 5.3345e-07 0.98069128 weaklyHypermeth 6.6681e-05 1.00000 weaklyHypermeth 6.3990e-04 9.6274e-01 weaklyHypermeth 6.3990e-02 1.000000 weaklyHypermeth 0.1415701 4.0041e-02 lowCoverage 1.0000000 lowCoverage 0.827220 0.2128060 0.6113199 5 0.835949 0.2126445 0.6233041 1.7684e-28 1.0000000 hypermethylated 4.4210e-26 1 hypermethylated 4.8020e-09 1.00000 hypermethylated 1.2005e-06 1 hypermethylated 5.7971e-01 6.6093e-05 lowCoverage 5.5077e-03 lowCoverage 0.827220 0.699208 1.2894e-01 5 0.835949 0.692618 0.1433310 1.6389e-04 0.9799914 weaklyHypermeth 1.0243e-02 1.00000 weaklyHypermeth 8.0210e-03 0.99547354 weaklyHypermeth 5.0132e-01 1.00000 insignificant 0.0967293 1.7939e-01 lowCoverage 1.000000 lowCoverage 0.2128060 0.699208 -0.4833794 5 0.21264 0.692618 -0.4799731 1.0000e+00 2.3512e-11 hypomethylated 1.0000e+00 5.8779e-09 hypomethylated 0.99999986 5.2362e-06 hypomethylated 1.00000 6.5453e-04 hypomethylated -0.48298555 4.3847e-04 lowCoverage 0.03986090 lowCoverage chr17 33642048 33643048 142030 ENSG00000207212 0.611752 120 4 0.5400021 110 6 0.681118 90 6 0.631614 98 2 0.672807 53 6 0.575306 272 6 0.865476 49 3 0.593866 130 6 0.653661 52 2 0.712857 83 6 0.69668 238 6 0.836310 38 2 0.713299 125 3 0.402174 30 1 0.743957 91 6 0.559829 32 2 0.939394 33 2 0.535226 113 6 0.656882 176 6 0.739371 207 6 0.360000 30 2 0.758170 42 2 0.626754 79 3 0.651276 57 6 0.445767 42 2 0.585830 173 6 0.652647 54 3 0.759259 28 2 0.600312 82 2 0.723288 137 6 0.598637 149 6 0.709560 190 6 0.5463425 104 6 0.775325 54 2 0.7636905 132 6 0.722222 20 2 0.523930 63 4 0.7336799 126 6 0.7188464 91 6 0.497981 134 6 0.723584 94 2 0.622685 74 2 0.766402 109 6 0.818843 0.675444 0.812274 0.823877 0.735817 0.819434 0.889340 0.709754 0.684092 0.820717 0.842774 0.771220 0.844478 0.800694 0.838846 0.769248 0.854836 0.837977 0.902274 0.865738 0.727214 0.867297 0.720437 0.701936 0.729515 0.863346 0.814525 0.884199 0.821571 0.867284 0.815774 0.865645 0.7979715 0.810019 0.89010513 0.653680 0.842354 0.838790 0.8934951 0.864588 0.874257 0.813402 0.867058 2 0.795794 0.808090 -0.0025664 5 0.645158 0.577211 0.06794673 0.1618345 8.3472e-01 insignificant 1 1.000000 insignificant 0.150548 0.9363814 insignificant 1 1.00000 insignificant 0.04545391 0.316612 lowCoverage 1 lowCoverage 0.795794 0.797595 0.0037985 5 0.645158 0.547719 0.09743862 5.3464e-01 5.0088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7641e-01 4.1247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0094527 8.6377e-01 lowCoverage 1.0000e+00 lowCoverage 0.799248 0.844622 -0.03268754 6 0.691201 0.486476 0.20472459 7.2734e-01 5.7764e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2882e-01 0.28568834 insignificant 1.0000e+00 1.00000 insignificant 0.0021793 0.9698016 lowCoverage 1.00000 lowCoverage 0.808090 0.797595 0.0064598 5 0.577211 0.547719 0.0294919 5.6551e-01 2.3369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2559e-01 4.0199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0549067 3.6037e-01 lowCoverage 1.0000e+00 lowCoverage 0.808671 0.844622 -0.03009802 5 0.585790 0.486476 0.0993137 8.7163e-01 5.5429e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3162e-01 0.6091993 insignificant 1.00000000 1 insignificant -0.04327466 0.4855788 lowCoverage 1.00000 lowCoverage 0.797189 0.844622 -0.0372816 5 0.497466 0.486476 0.0109894 9.4141e-01 7.8056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3133e-01 8.1856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116320 8.6497e-01 lowCoverage 1.0000000 lowCoverage chr17 33843646 33844646 142045 SOCS7 ENSG00000174111 0.868320 375 8 0.8790415 280 9 0.760877 163 9 0.883989 212 8 0.743882 107 8 0.815271 496 8 0.605864 203 8 0.851404 214 8 0.873260 127 7 0.959977 148 8 0.80812 303 10 0.783081 104 8 0.841833 224 9 0.433136 53 2 0.844649 176 8 0.909524 71 8 0.863490 95 7 0.616558 449 8 0.721041 428 9 0.767134 373 9 0.865260 112 9 0.563492 109 6 0.739244 238 9 0.869958 66 6 0.880409 270 8 0.878493 274 9 0.857696 132 8 0.775094 70 6 0.825283 206 8 0.886068 281 10 0.868117 399 9 0.892984 376 10 0.6803136 272 9 0.693432 278 9 0.8128292 283 7 0.796004 165 7 0.696039 115 8 0.8818589 327 9 0.7479398 282 8 0.658216 288 8 0.649715 217 8 0.521606 377 7 0.779353 236 8 0.863931 0.897101 0.807076 0.919674 0.927570 0.899190 0.856810 0.888750 0.800019 0.934256 0.866746 0.740726 0.897361 0.782611 0.862607 0.906055 0.795602 0.746254 0.872226 0.882029 0.887868 0.620369 0.887278 0.881684 0.895810 0.917381 0.815274 0.800446 0.863910 0.913723 0.860651 0.887697 0.7489539 0.684604 0.60089006 0.865232 0.842745 0.898413 0.8098228 0.741872 0.712925 0.721334 0.780208 7 0.856925 0.861824 -0.0107649 9 0.726392 0.801453 -0.07506042 0.9922888 7.4090e-02 insignificant 1 1.000000 insignificant 0.986456 0.1667120 insignificant 1 1.00000 insignificant -0.03365252 0.393792 insignificant 1 insignificant 0.857609 0.775382 0.0453131 9 0.759147 0.675965 0.08318272 1.7231e-02 2.2575e-01 weaklyHypermeth 1.5385e-01 1.0000e+00 insignificant 1.7344e-01 2.8482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0314429 4.8237e-01 insignificant 1.0000e+00 insignificant 0.858139 0.771429 0.09603703 8 0.805433 0.670126 0.13530720 1.2674e-09 9.9994e-01 weaklyHypermeth 1.1522e-07 1.0000000 weaklyHypermeth 2.0909e-06 0.99983624 weaklyHypermeth 2.6137e-04 1.00000 weaklyHypermeth 0.1201563 0.0553497 insignificant 1.00000 insignificant 0.863079 0.775382 0.0626179 9 0.840463 0.675965 0.1644982 1.2334e-01 6.5286e-01 insignificant 9.3441e-01 1.0000e+00 insignificant 1.9690e-01 8.5398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0650955 1.5986e-01 insignificant 1.0000e+00 insignificant 0.862753 0.771429 0.10478482 8 0.825959 0.670126 0.1558331 5.9526e-08 9.9978e-01 weaklyHypermeth 7.4407e-06 1.0000000 weaklyHypermeth 3.4936e-05 0.9999805 weaklyHypermeth 0.00436698 1 weaklyHypermeth 0.15380886 0.0219131 weaklyHypermeth 1.00000 insignificant 0.777003 0.771429 0.0542429 8 0.737416 0.670126 0.0672897 4.5712e-03 9.9685e-01 weaklyHypermeth 3.8093e-01 1.0000e+00 insignificant 3.1451e-02 9.9992e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0887134 1.5416e-01 insignificant 1.0000000 insignificant chr17 33874801 33875801 142049 SOCS7 ENSG00000174111 0.736464 203 14 0.6204775 324 15 0.705282 348 14 0.785204 72 8 0.835507 223 13 0.840628 258 12 0.742535 264 11 0.637987 252 12 0.770806 256 11 0.890332 250 12 0.88433 479 15 0.763263 209 13 0.762102 366 11 0.500000 2 0 0.715542 277 12 0.791855 97 9 0.625348 174 11 0.590113 120 11 0.819583 485 14 0.637452 292 13 0.871508 141 10 0.494792 31 2 0.826176 286 14 0.752510 81 6 0.590278 29 2 0.575038 318 11 0.761174 159 12 0.859091 86 8 0.626352 290 11 0.834663 378 13 0.437029 699 15 0.948651 393 14 0.0051768 462 14 0.011184 377 13 0.0122091 368 10 0.000000 58 4 0.035684 132 11 0.0086667 524 14 0.3321196 208 14 0.556928 288 14 0.626616 77 10 0.594718 175 13 0.307908 96 11 0.746934 0.676138 0.704242 0.779343 0.849717 0.864881 0.863938 0.722452 0.796574 0.839981 0.883234 0.771981 0.794855 NA 0.778571 0.734287 0.690073 0.551359 0.881480 0.642600 0.912928 0.474645 0.794281 0.713768 0.711894 0.726493 0.775084 0.868307 0.694296 0.804368 0.500736 0.942645 0.0021785 0.020877 0.01894511 0.000000 0.043909 0.017746 0.3789811 0.528254 0.576347 0.535186 0.354600 4 0.806706 0.748184 0.0601808 13 0.776491 0.695047 0.08144468 0.0025921 9.9605e-01 weaklyHypermeth 1 1.000000 insignificant 0.516807 0.3515463 insignificant 1 1.00000 insignificant 0.01796899 0.738639 insignificant 1 insignificant 0.806706 0.015617 0.7903824 13 0.776491 0.012125 0.76436631 7.6789e-153 1.0000e+00 hypermethylated 7.6789e-150 1.0000e+00 hypermethylated 2.5515e-34 1.0000e+00 hypermethylated 2.5515e-31 1.0000e+00 hypermethylated 0.7205874 1.3041e-18 hypermethylated 1.3041e-15 hypermethylated 0.806706 0.475118 0.31889025 13 0.776491 0.456159 0.32033217 1.9814e-37 1.0000e+00 hypermethylated 1.9814e-34 1.0000000 hypermethylated 2.1178e-14 0.99999914 hypermethylated 2.1178e-11 1.00000 hypermethylated 0.2490828 0.0178849 weaklyHypermeth 0.61847 insignificant 0.748184 0.015617 0.7315979 13 0.695047 0.012125 0.6829216 7.8789e-78 1.0000e+00 hypermethylated 3.9394e-75 1.0000e+00 hypermethylated 6.8039e-28 1.0000e+00 hypermethylated 6.8039e-25 1.0000e+00 hypermethylated 0.7026184 1.0950e-08 hypermethylated 9.1249e-07 hypermethylated 0.748184 0.475118 0.23854656 13 0.695047 0.456159 0.2388875 1.4429e-10 1.0000e+00 hypermethylated 2.8859e-08 1.0000000 hypermethylated 5.9900e-08 0.9999367 hypermethylated 0.00005990 1 hypermethylated 0.23111381 0.0230516 weaklyHypermeth 1.00000 insignificant 0.015617 0.475118 -0.4639739 14 0.012125 0.456159 -0.4440341 1.0000e+00 5.6947e-40 hypomethylated 1.0000e+00 5.6947e-37 hypomethylated 1.0000e+00 2.7077e-16 hypomethylated 1.0000e+00 2.7077e-13 hypomethylated -0.4715046 2.1817e-03 weaklyHypometh 0.0623341 weaklyHypometh chr17 33978627 33979627 142054 ENSG00000167433 0.890231 131 3 0.7028935 147 6 0.667267 185 6 0.835866 101 2 0.848589 149 6 0.773679 449 6 0.736852 168 6 0.809401 129 6 0.882797 140 6 0.869508 138 6 0.79209 208 6 0.779046 115 4 0.818673 150 4 0.863103 68 4 0.740944 132 4 0.683115 119 4 0.778730 148 3 0.841004 180 2 0.836083 405 6 0.938553 384 6 0.738889 80 6 0.708333 10 1 0.597130 145 5 0.855291 78 4 0.981481 22 2 0.835832 217 6 0.600348 195 6 0.880094 94 6 0.784818 205 6 0.892410 230 6 0.906817 337 6 0.706694 259 4 0.5323274 161 6 0.487889 220 6 0.5779997 297 5 0.633333 8 1 0.466218 122 5 0.5765613 215 6 0.6864719 162 4 0.853158 166 3 0.783269 91 2 0.939860 279 2 0.876531 84 4 0.863127 0.704701 0.777633 0.846189 0.852413 0.858689 0.715741 0.858990 0.883775 0.855002 0.823644 0.842677 0.861948 0.881768 0.898998 0.806998 0.774774 0.790490 0.890827 0.874018 0.862403 0.873946 0.739532 0.739167 0.934264 0.839041 0.786619 0.920489 0.823560 0.894519 0.930646 0.856383 0.4466103 0.406195 0.24271177 0.457417 0.732405 0.671070 0.8126085 0.891741 0.825703 0.881910 0.840624 2 0.824191 0.850882 -0.0176156 6 0.762761 0.715663 0.04709881 0.7081883 7.9284e-02 insignificant 1 1.000000 insignificant 0.757380 0.2659033 insignificant 1 1.00000 insignificant 0.01374348 0.728244 lowCoverage 1 lowCoverage 0.824191 0.609207 0.2925894 6 0.762761 0.479195 0.28356622 6.2962e-16 9.9914e-01 hypermethylated 1.8518e-14 1.0000e+00 hypermethylated 3.9806e-06 9.9958e-01 hypermethylated 9.7087e-05 1.0000e+00 hypermethylated 0.2587000 9.4420e-06 lowCoverage 4.1052e-04 lowCoverage 0.824369 0.855499 -0.02258435 2 0.806555 0.776980 0.02957522 1.6006e-01 3.6863e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.4368e-01 0.20175144 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0234365 0.6331516 lowCoverage 1.00000 lowCoverage 0.850427 0.608016 0.2902428 6 0.626205 0.419296 0.2069090 1.0913e-09 1.0000e+00 hypermethylated 2.3220e-08 1.0000e+00 hypermethylated 3.6798e-04 1.0000e+00 hypermethylated 7.0765e-03 1.0000e+00 hypermethylated 0.2449565 3.8775e-05 lowCoverage 1.4361e-03 lowCoverage 0.851337 0.855499 -0.00353708 2 0.834940 0.776980 0.0579599 1.2041e-01 6.3696e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.7626e-01 0.3950361 lowCoverage 1.00000000 1 lowCoverage -0.03718001 0.5216736 lowCoverage 1.00000 lowCoverage 0.611002 0.855499 -0.3361353 2 0.559061 0.776980 -0.2179187 9.9917e-01 1.1135e-04 lowCoverage 1.0000e+00 2.2271e-03 lowCoverage 9.9967e-01 1.1869e-03 lowCoverage 1.0000e+00 2.9941e-02 lowCoverage -0.2821366 9.7832e-04 lowCoverage 0.0326106 lowCoverage chr17 34151989 34152989 142069 ENSG00000200115 0.903956 329 5 0.7936772 142 5 0.720878 74 5 0.838660 334 5 0.854503 58 5 0.902242 351 5 0.801905 43 5 0.831156 99 5 0.910829 57 5 0.896703 40 5 0.75118 161 5 0.738095 18 1 0.856667 36 4 0.684295 52 4 0.791920 58 5 0.633333 34 3 1.000000 1 0 0.765198 399 5 0.916715 269 5 0.862706 284 5 0.811111 45 4 0.770000 20 3 0.905447 108 5 0.873775 73 5 0.891930 347 5 0.881352 176 5 0.820998 87 5 0.892857 27 3 0.701600 191 5 0.898323 193 5 0.899522 244 5 0.761124 241 5 0.3691513 168 5 0.373333 141 5 0.4615385 46 2 0.421333 104 4 0.383330 183 5 0.4053682 314 5 0.6190451 240 5 0.744359 274 5 0.858237 247 5 0.849866 325 5 0.441495 213 5 0.872231 0.792503 0.851276 0.831213 0.845300 0.888309 0.778723 0.841892 0.881959 0.875720 0.750913 0.760204 0.857143 0.815018 0.838318 0.777778 NA 0.724941 0.910689 0.862600 0.833774 0.680952 0.884929 0.910568 0.876933 0.879130 0.785400 0.861678 0.733880 0.898311 0.874911 0.752504 0.2902316 0.306758 0.47502862 0.311640 0.339813 0.328147 0.5908712 0.689014 0.808720 0.800448 0.393656 2 0.818950 0.843607 -0.0168735 5 0.730574 0.826605 -0.09603160 0.9693715 1.4099e-01 insignificant 1 1.000000 insignificant 0.750338 0.4801176 insignificant 1 1.00000 insignificant -0.01960558 0.491373 lowCoverage 1 lowCoverage 0.818950 0.283473 0.5292541 5 0.730574 0.362895 0.36767913 6.8078e-34 9.9987e-01 hypermethylated 3.7821e-32 1.0000e+00 hypermethylated 9.8559e-08 1.0000e+00 hypermethylated 3.5200e-06 1.0000e+00 hypermethylated 0.4203884 4.5297e-14 lowCoverage 6.4709e-12 lowCoverage 0.818950 0.632025 0.17923010 5 0.730574 0.755173 -0.02459903 1.2085e-05 6.6961e-01 weaklyHypermeth 6.2834e-04 1.0000000 weaklyHypermeth 1.3621e-03 0.88231171 weaklyHypermeth 5.4484e-02 1.00000 weaklyHypermeth 0.1201306 0.2034397 lowCoverage 1.00000 lowCoverage 0.843607 0.283473 0.5475187 5 0.826605 0.362895 0.4637107 8.0993e-28 1.0000e+00 hypermethylated 5.0621e-26 1.0000e+00 hypermethylated 6.6148e-07 9.9999e-01 hypermethylated 2.2810e-05 1.0000e+00 hypermethylated 0.4399940 4.9775e-12 lowCoverage 1.6592e-09 lowCoverage 0.843607 0.632025 0.19250651 5 0.826605 0.755173 0.0714326 1.2564e-05 9.2970e-01 weaklyHypermeth 6.6127e-04 1.0000000 weaklyHypermeth 6.8898e-03 0.9817859 weaklyHypermeth 0.20878160 1 insignificant 0.13973614 0.1505580 lowCoverage 1.00000 lowCoverage 0.283473 0.632025 -0.3560848 5 0.362895 0.755173 -0.3922782 1.0000e+00 1.2326e-09 hypomethylated 1.0000e+00 5.3590e-08 hypomethylated 9.9999e-01 8.8420e-04 hypomethylated 1.0000e+00 2.5169e-02 hypomethylated -0.3002579 1.7431e-02 lowCoverage 0.2526161 lowCoverage chr17 35001487 35002487 142105 ENSG00000222777 0.033761 354 6 0.0342115 190 6 0.080542 254 6 0.008772 85 6 0.052885 117 6 0.084291 427 6 0.045739 216 6 0.028730 175 6 0.095444 177 6 0.051157 138 6 0.04825 257 6 0.036141 150 6 0.037287 255 6 NA 0 0 0.027702 266 6 0.025034 173 6 0.092507 227 6 0.044508 174 6 0.091992 270 6 0.036151 466 6 0.016703 152 6 0.052750 159 6 0.041737 250 6 0.059331 93 6 0.011905 64 6 0.040568 288 6 0.020915 168 6 0.020833 65 6 0.022040 214 6 0.052739 261 6 0.034449 475 6 0.042750 402 6 0.0131579 184 6 0.092355 126 6 0.0000000 62 4 0.057937 75 6 0.030303 51 6 0.0353821 246 6 0.0294392 375 6 0.044663 322 6 0.026611 155 6 0.037166 345 6 0.034355 196 6 0.039627 0.034980 0.089250 0.011494 0.058079 0.090327 0.048298 0.027041 0.105859 0.051600 0.039436 0.039802 0.040203 NA 0.030494 0.022094 0.098597 0.046520 0.092772 0.040384 0.021796 0.059632 0.045536 0.063740 0.015394 0.045404 0.021490 0.016523 0.021147 0.059457 0.039491 0.039256 0.0170145 0.112507 0.00098978 0.063013 0.031609 0.045863 0.0324948 0.052625 0.028458 0.042423 0.033061 6 0.055594 0.039753 0.0156905 6 0.052966 0.037406 0.01555968 0.0326397 9.7545e-01 weaklyHypermeth 1 1.000000 insignificant 0.057555 0.9599047 insignificant 1 1.00000 insignificant 0.01554206 0.047954 weaklyHypermeth 1 insignificant 0.055594 0.045699 0.0074918 6 0.052966 0.039365 0.01360046 1.2873e-02 7.5420e-01 weaklyHypermeth 1.2145e-01 1.0000e+00 insignificant 2.8323e-02 9.0827e-01 weaklyHypermeth 3.1124e-01 1.0000e+00 insignificant 0.0120796 4.4014e-01 insignificant 1.0000e+00 insignificant 0.055594 0.040201 0.01634376 6 0.052966 0.035306 0.01765952 5.0968e-02 9.9730e-01 insignificant 8.9417e-01 1.0000000 insignificant 1.1235e-01 0.99499995 insignificant 1.0000e+00 1.00000 insignificant 0.0158219 0.0283462 weaklyHypermeth 0.91037 insignificant 0.039753 0.045699 -0.0071489 6 0.037406 0.039365 -0.0019592 1.5128e-01 4.1625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2657e-01 7.1472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0034625 8.1620e-01 insignificant 1.0000e+00 insignificant 0.039753 0.040201 0.00072196 6 0.037406 0.035306 0.0020998 2.6612e-01 8.6010e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.0233e-01 0.7133480 insignificant 1.00000000 1 insignificant 0.00027982 0.9606353 insignificant 1.00000 insignificant 0.045699 0.040201 0.0084454 6 0.039365 0.035306 0.0040591 5.1823e-01 2.9607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3237e-01 5.2248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0037423 7.9716e-01 insignificant 1.0000000 insignificant chr17 35150077 35151077 142120 GRB7 ENSG00000141738 0.191615 141 5 0.0594295 130 5 0.033937 139 5 0.064876 193 4 0.068978 141 5 0.071994 293 5 0.121965 141 5 0.029947 124 5 0.050059 212 5 0.078510 128 5 0.09175 158 5 0.067320 138 5 0.061213 152 5 0.136905 56 4 0.062500 128 5 0.070677 99 5 0.068624 179 5 0.072195 173 4 0.050654 152 5 0.070141 267 5 0.088889 64 5 0.079307 87 4 0.076656 131 5 0.019765 67 5 0.041667 44 4 0.067055 147 5 0.072331 70 5 0.039284 87 4 0.032784 117 5 0.059846 185 5 0.120114 235 5 0.037913 196 5 0.2151196 121 5 0.294988 97 5 0.0846154 115 4 0.213333 26 1 0.255000 52 5 0.2086717 96 5 0.1778751 170 4 0.200657 157 4 0.088645 119 4 0.263095 118 4 0.107427 162 4 0.168034 0.064935 0.043415 0.076471 0.054275 0.085157 0.133424 0.018048 0.058641 0.063939 0.107803 0.051981 0.048786 0.128415 0.063721 0.104617 0.051140 0.080721 0.051224 0.090247 0.067708 0.098334 0.084930 0.032693 0.030079 0.072168 0.096482 0.054774 0.058819 0.067609 0.127237 0.054420 0.2004984 0.353909 0.07602163 0.204687 0.295020 0.213002 0.1808813 0.142887 0.100811 0.212822 0.102598 4 0.070293 0.070629 0.0013984 5 0.073532 0.066640 0.00689182 0.3871255 5.9517e-01 insignificant 1 1.000000 insignificant 0.161609 0.7976229 insignificant 1 1.00000 insignificant 0.01486360 0.211430 lowCoverage 1 lowCoverage 0.070293 0.181460 -0.1080307 5 0.073532 0.201343 -0.12781059 4.2586e-01 1.2549e-07 weaklyHypometh 1.0000e+00 1.2549e-05 weaklyHypometh 2.3473e-01 3.7066e-03 weaklyHypometh 1.0000e+00 3.0889e-01 insignificant -0.1357903 4.2817e-03 lowCoverage 7.0192e-02 lowCoverage 0.070293 0.137741 -0.07246881 4 0.073532 0.175044 -0.10151222 9.9789e-01 1.0262e-06 lowCoverage 1.0000e+00 0.0010262 lowCoverage 9.4441e-01 0.00190173 lowCoverage 1.0000e+00 0.38035 lowCoverage -0.0913754 0.0428942 lowCoverage 1.00000 lowCoverage 0.070629 0.181460 -0.1098701 5 0.066640 0.201343 -0.1347024 4.9628e-01 2.8617e-06 weaklyHypometh 1.0000e+00 3.1797e-04 weaklyHypometh 4.1442e-01 7.1398e-03 weaklyHypometh 1.0000e+00 6.4907e-01 insignificant -0.1506539 2.6162e-03 lowCoverage 4.5107e-02 lowCoverage 0.070629 0.137741 -0.07410887 4 0.066640 0.175044 -0.1084040 9.7457e-01 3.7077e-06 lowCoverage 1.0000e+00 0.0037077 lowCoverage 9.6580e-01 0.0011262 lowCoverage 1.00000000 1 lowCoverage -0.10623899 0.0263697 lowCoverage 1.00000 lowCoverage 0.181460 0.137741 0.0596480 4 0.201343 0.175044 0.0262984 1.8743e-01 2.6768e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.1982e-01 2.6711e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0444149 3.2880e-01 lowCoverage 1.0000000 lowCoverage chr17 35353514 35354514 142140 ENSG00000204913 0.953105 327 11 0.8741569 219 10 0.900672 241 10 0.940917 282 9 0.958346 126 10 0.842191 469 9 0.762073 206 10 0.925983 190 10 0.793148 178 10 0.939565 201 10 0.94544 300 10 0.951476 129 10 0.882564 215 10 NA 0 0 0.912559 244 10 0.985714 82 7 0.834624 162 9 0.860551 272 7 0.906800 214 8 0.855669 387 10 0.800478 132 9 0.866203 121 7 0.809752 212 10 0.875325 114 10 0.730019 103 5 0.936712 266 10 0.795127 159 10 0.854067 101 9 0.841373 134 7 0.930281 264 10 0.918201 407 10 0.955652 359 10 0.7507872 259 10 0.692972 182 8 0.7707895 96 8 0.861232 105 7 0.839101 119 9 0.8292178 224 10 0.9376099 277 7 0.900901 347 10 0.964677 280 5 0.937046 260 9 0.881845 327 11 0.941307 0.873719 0.897711 0.924532 0.950829 0.898286 0.880389 0.904671 0.864892 0.942080 0.945901 0.937286 0.898787 NA 0.893081 0.971612 0.882951 0.896615 0.934628 0.936667 0.839155 0.853911 0.896357 0.886811 0.852596 0.938310 0.886556 0.905964 0.875397 0.931700 0.949179 0.935447 0.8054332 0.769292 0.88842367 0.867849 0.811164 0.805238 0.8963268 0.925636 0.939271 0.919745 0.942635 4 0.907003 0.905143 0.0052147 10 0.860218 0.844051 0.01616661 0.0946802 7.3080e-01 insignificant 1 1.000000 insignificant 0.204953 0.9451064 insignificant 1 1.00000 insignificant 0.03664939 0.141765 insignificant 1 insignificant 0.906940 0.778680 0.1294900 10 0.878303 0.776568 0.10173454 1.6487e-11 9.9952e-01 weaklyHypermeth 3.5841e-10 1.0000e+00 weaklyHypermeth 3.3457e-04 9.7086e-01 weaklyHypermeth 6.3126e-03 1.0000e+00 weaklyHypermeth 0.1053987 7.1891e-03 weaklyHypermeth 1.1200e-01 insignificant 0.908701 0.910127 -0.00469623 8 0.924924 0.924626 0.00029811 2.4858e-01 1.7830e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9891e-01 0.27593380 insignificant 1.0000e+00 1.00000 insignificant -0.0283339 0.1845174 insignificant 1.00000 insignificant 0.905405 0.778680 0.1219214 10 0.846731 0.776568 0.0701626 3.6503e-06 9.9386e-01 weaklyHypermeth 5.9841e-05 1.0000e+00 weaklyHypermeth 6.7690e-03 6.6048e-01 weaklyHypermeth 9.0253e-02 1.0000e+00 weaklyHypermeth 0.0687493 5.9559e-02 insignificant 6.3361e-01 insignificant 0.906514 0.909764 -0.00675325 8 0.896982 0.913029 -0.0160474 9.0103e-01 2.5098e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7632e-01 0.1277821 insignificant 1.00000000 1 insignificant -0.06498332 0.0188837 weaklyHypometh 0.99388 insignificant 0.779247 0.910479 -0.1226320 8 0.801711 0.918862 -0.1171511 1.0000e+00 1.6975e-04 weaklyHypometh 1.0000e+00 3.2029e-03 weaklyHypometh 9.9921e-01 2.7514e-03 weaklyHypometh 1.0000e+00 5.7321e-02 weaklyHypometh -0.1337326 2.2724e-03 weaklyHypometh 0.0631228 weaklyHypometh chr17 35444244 35445244 142141 CSF3 ENSG00000108342 0.353644 358 7 0.2959193 195 7 0.369790 158 7 0.383264 444 7 0.413658 58 7 0.377936 541 7 0.414179 124 7 0.439785 176 7 0.383141 160 7 0.415791 106 7 0.41128 218 7 0.403838 134 7 0.393580 188 7 NA 0 0 0.397609 164 7 0.290410 55 6 0.306721 180 7 0.438378 427 7 0.313473 207 7 0.427772 538 7 0.464159 99 7 0.356756 283 7 0.479401 282 7 0.399070 160 7 0.410314 160 7 0.401682 243 7 0.339103 152 7 0.434447 60 5 0.353040 109 7 0.346538 292 7 0.357949 407 7 0.507300 403 7 0.3243715 154 7 0.282347 120 7 0.3194805 159 3 0.504579 81 7 0.508012 78 6 0.3578047 220 7 0.4066753 352 7 0.440435 389 7 0.415373 389 7 0.417414 392 7 0.410777 396 7 0.338962 0.289066 0.380216 0.368847 0.445472 0.389375 0.399679 0.404073 0.368922 0.433474 0.398937 0.394205 0.370587 NA 0.382458 0.317971 0.306397 0.431198 0.290953 0.411923 0.432672 0.331296 0.454431 0.411496 0.400698 0.383840 0.346725 0.450062 0.318879 0.308458 0.333493 0.503076 0.2841999 0.244103 0.49872799 0.419457 0.455010 0.367220 0.3933918 0.421525 0.395703 0.395744 0.387294 7 0.378470 0.367925 -0.0078089 7 0.387766 0.401848 -0.01408185 0.8242157 2.1587e-01 insignificant 1 1.000000 insignificant 0.804540 0.2882933 insignificant 1 1.00000 insignificant -0.02361160 0.243861 insignificant 1 insignificant 0.378470 0.410099 -0.0541761 7 0.387766 0.441819 -0.05405289 3.6904e-01 1.5055e-02 weaklyHypometh 1.0000e+00 9.4092e-01 insignificant 1.9435e-01 4.4321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0022309 9.5916e-01 insignificant 1.0000e+00 insignificant 0.378470 0.398853 -0.01569894 7 0.387766 0.418590 -0.03082364 5.2139e-02 9.7509e-05 weaklyHypometh 8.9895e-01 0.0487544 weaklyHypometh 1.3711e-01 0.00010867 weaklyHypometh 1.0000e+00 0.10867 insignificant -0.0376000 0.0061055 weaklyHypometh 0.38159 insignificant 0.367925 0.410099 -0.0446661 7 0.401848 0.441819 -0.0399710 6.1412e-01 1.9092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3103e-01 7.9951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0213807 6.3854e-01 insignificant 1.0000e+00 insignificant 0.367925 0.398853 -0.00391410 7 0.401848 0.418590 -0.0167418 2.6679e-01 2.7569e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 1.6082e-01 0.0115229 weaklyHypometh 1.00000000 1 insignificant -0.01398837 0.4356356 insignificant 1.00000 insignificant 0.410099 0.398853 0.0377575 7 0.441819 0.418590 0.0232292 4.8565e-01 3.2773e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3418e-01 5.5178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0353690 4.2299e-01 insignificant 1.0000000 insignificant chr17 35481407 35482407 142148 THRA ENSG00000126351 0.732376 392 8 0.7048124 325 8 0.710888 348 8 0.758804 282 8 0.732409 177 8 0.793963 718 8 0.737480 233 8 0.734577 282 8 0.716771 232 8 0.640570 242 8 0.84487 405 8 0.654697 137 8 0.637771 353 8 0.721566 91 4 0.713786 255 8 0.704932 92 7 0.442205 130 6 0.616849 360 8 0.794266 536 8 0.840450 612 8 0.617947 136 8 0.461669 226 8 0.629025 299 8 0.564987 182 7 0.626573 121 8 0.821995 456 8 0.599808 312 8 0.599756 173 8 0.748747 331 8 0.825999 472 8 0.825194 607 8 0.866961 584 8 0.1456872 331 8 0.189729 300 8 0.2544920 335 8 0.152192 162 5 0.132366 445 9 0.1661583 558 8 0.5756343 429 8 0.561344 574 8 0.678249 310 8 0.696580 360 8 0.501782 509 8 0.749062 0.666092 0.693708 0.747184 0.790851 0.823057 0.711139 0.776718 0.783381 0.790080 0.816949 0.707406 0.698140 0.727518 0.700515 0.635589 0.547127 0.627724 0.770923 0.809279 0.766810 0.478783 0.691639 0.604865 0.669749 0.778407 0.740835 0.728448 0.761992 0.816300 0.798942 0.840684 0.1291045 0.194026 0.21645151 0.047812 0.168066 0.135945 0.5215716 0.519291 0.614738 0.667499 0.482492 8 0.752822 0.759425 -0.0063458 8 0.675182 0.606935 0.06824749 0.7177085 7.4297e-01 insignificant 1 1.000000 insignificant 0.619893 0.8074930 insignificant 1 1.00000 insignificant 0.02931358 0.497926 insignificant 1 insignificant 0.752822 0.177382 0.5799185 8 0.675182 0.183076 0.49210628 2.6340e-71 1.0000e+00 hypermethylated 4.3900e-69 1.0000e+00 hypermethylated 8.1378e-20 1.0000e+00 hypermethylated 1.3563e-17 1.0000e+00 hypermethylated 0.5382646 1.5654e-13 hypermethylated 1.7393e-11 hypermethylated 0.753066 0.529331 0.20622822 8 0.714111 0.627331 0.08678023 1.4914e-16 9.4698e-01 hypermethylated 2.9828e-14 1.0000000 hypermethylated 2.4545e-08 0.77266387 hypermethylated 6.1363e-06 1.00000 hypermethylated 0.1089841 0.0373608 weaklyHypermeth 0.98318 insignificant 0.759425 0.177382 0.5830236 8 0.606935 0.183076 0.4238588 9.7230e-48 1.0000e+00 hypermethylated 1.6205e-45 1.0000e+00 hypermethylated 1.4726e-16 1.0000e+00 hypermethylated 1.8407e-14 1.0000e+00 hypermethylated 0.5089511 3.4770e-09 hypermethylated 3.4770e-07 hypermethylated 0.760534 0.529331 0.21072316 8 0.714031 0.627331 0.0867000 1.3333e-10 9.4374e-01 hypermethylated 2.8859e-08 1.0000000 hypermethylated 5.7973e-05 0.9279451 hypermethylated 0.00482922 1 hypermethylated 0.07967057 0.1555181 insignificant 1.00000 insignificant 0.177191 0.529331 -0.3735213 8 0.179315 0.627331 -0.4480163 1.0000e+00 5.1635e-27 hypomethylated 1.0000e+00 1.2909e-24 hypomethylated 1.0000e+00 4.7699e-11 hypomethylated 1.0000e+00 7.9499e-09 hypomethylated -0.4292805 5.0774e-05 hypomethylated 0.0090124 hypomethylated chr17 35481738 35482738 142149 THRA ENSG00000126351 0.732376 392 8 0.7048124 325 8 0.710888 348 8 0.758804 282 8 0.732409 177 8 0.793963 718 8 0.737480 233 8 0.734577 282 8 0.716771 232 8 0.640570 242 8 0.84487 405 8 0.654697 137 8 0.637771 353 8 0.721566 91 4 0.713786 255 8 0.704932 92 7 0.442205 130 6 0.616849 360 8 0.794266 536 8 0.840450 612 8 0.617947 136 8 0.461669 226 8 0.629025 299 8 0.564987 182 7 0.626573 121 8 0.821995 456 8 0.599808 312 8 0.599756 173 8 0.748747 331 8 0.825999 472 8 0.825194 607 8 0.866961 584 8 0.1456872 331 8 0.189729 300 8 0.2544920 335 8 0.152192 162 5 0.132366 445 9 0.1661583 558 8 0.5756343 429 8 0.561344 574 8 0.678249 310 8 0.696580 360 8 0.501782 509 8 0.749062 0.666092 0.693708 0.747184 0.790851 0.823057 0.711139 0.776718 0.783381 0.790080 0.816949 0.707406 0.698140 0.727518 0.700515 0.635589 0.547127 0.627724 0.770923 0.809279 0.766810 0.478783 0.691639 0.604865 0.669749 0.778407 0.740835 0.728448 0.761992 0.816300 0.798942 0.840684 0.1291045 0.194026 0.21645151 0.047812 0.168066 0.135945 0.5215716 0.519291 0.614738 0.667499 0.482492 8 0.752822 0.759425 -0.0063458 8 0.675182 0.606935 0.06824749 0.7177085 7.4297e-01 insignificant 1 1.000000 insignificant 0.619893 0.8074930 insignificant 1 1.00000 insignificant 0.02931358 0.497926 insignificant 1 insignificant 0.752822 0.177382 0.5799185 8 0.675182 0.183076 0.49210628 2.6340e-71 1.0000e+00 hypermethylated 4.3900e-69 1.0000e+00 hypermethylated 8.1378e-20 1.0000e+00 hypermethylated 1.3563e-17 1.0000e+00 hypermethylated 0.5382646 1.5654e-13 hypermethylated 1.7393e-11 hypermethylated 0.753066 0.529331 0.20622822 8 0.714111 0.627331 0.08678023 1.4914e-16 9.4698e-01 hypermethylated 2.9828e-14 1.0000000 hypermethylated 2.4545e-08 0.77266387 hypermethylated 6.1363e-06 1.00000 hypermethylated 0.1089841 0.0373608 weaklyHypermeth 0.98318 insignificant 0.759425 0.177382 0.5830236 8 0.606935 0.183076 0.4238588 9.7230e-48 1.0000e+00 hypermethylated 1.6205e-45 1.0000e+00 hypermethylated 1.4726e-16 1.0000e+00 hypermethylated 1.8407e-14 1.0000e+00 hypermethylated 0.5089511 3.4770e-09 hypermethylated 3.4770e-07 hypermethylated 0.760534 0.529331 0.21072316 8 0.714031 0.627331 0.0867000 1.3333e-10 9.4374e-01 hypermethylated 2.8859e-08 1.0000000 hypermethylated 5.7973e-05 0.9279451 hypermethylated 0.00482922 1 hypermethylated 0.07967057 0.1555181 insignificant 1.00000 insignificant 0.177191 0.529331 -0.3735213 8 0.179315 0.627331 -0.4480163 1.0000e+00 5.1635e-27 hypomethylated 1.0000e+00 1.2909e-24 hypomethylated 1.0000e+00 4.7699e-11 hypomethylated 1.0000e+00 7.9499e-09 hypomethylated -0.4292805 5.0774e-05 hypomethylated 0.0090124 hypomethylated chr17 35482118 35483118 142150 THRA ENSG00000126351 0.722408 331 6 0.7037813 281 6 0.722850 307 6 0.749239 243 6 0.686567 158 6 0.789595 629 6 0.705529 209 6 0.712339 248 6 0.688230 204 6 0.616337 229 6 0.82004 354 6 0.644474 121 6 0.620984 297 6 0.721566 91 4 0.731202 222 6 0.741450 75 5 0.334977 113 4 0.615679 317 6 0.782254 499 6 0.853351 529 6 0.571912 111 6 0.438186 195 6 0.596924 253 6 0.562762 156 5 0.593473 95 6 0.824252 404 6 0.553580 270 6 0.568444 145 6 0.743628 315 6 0.856318 428 6 0.829116 540 6 0.868221 495 6 0.1609894 288 6 0.213687 257 6 0.3110457 298 6 0.196970 126 3 0.147892 422 7 0.1939330 521 6 0.5448028 382 6 0.562682 484 6 0.733431 266 6 0.737052 307 6 0.485219 463 6 0.746700 0.659239 0.695523 0.741670 0.775088 0.825502 0.693002 0.768529 0.777882 0.796606 0.800601 0.710830 0.701672 0.722845 0.712418 0.641639 0.508935 0.630090 0.762537 0.811540 0.763271 0.469785 0.687964 0.616407 0.658507 0.773242 0.733293 0.733425 0.762470 0.831346 0.797155 0.838351 0.1353642 0.208948 0.25431884 0.052705 0.187750 0.150240 0.5002232 0.517076 0.639948 0.686194 0.474284 6 0.752611 0.760200 -0.0073912 6 0.656208 0.571499 0.08470809 0.7184599 8.8878e-01 insignificant 1 1.000000 insignificant 0.775002 0.8597758 insignificant 1 1.00000 insignificant 0.03090792 0.533955 insignificant 1 insignificant 0.752611 0.191423 0.5660721 6 0.656208 0.208821 0.44738645 1.5349e-50 1.0000e+00 hypermethylated 2.1928e-48 1.0000e+00 hypermethylated 5.9852e-15 1.0000e+00 hypermethylated 5.9852e-13 1.0000e+00 hypermethylated 0.4940566 9.7130e-11 hypermethylated 8.8300e-09 hypermethylated 0.752889 0.539432 0.20258530 6 0.700838 0.647254 0.05358461 1.1925e-12 8.1173e-01 hypermethylated 1.7036e-10 1.0000000 hypermethylated 1.6725e-06 0.52624018 hypermethylated 2.3893e-04 1.00000 hypermethylated 0.0855052 0.1851115 insignificant 1.00000 insignificant 0.760200 0.191423 0.5706930 6 0.571499 0.208821 0.3626784 2.2999e-32 9.9996e-01 hypermethylated 1.9166e-30 1.0000e+00 hypermethylated 1.8535e-12 9.9996e-01 hypermethylated 1.8535e-10 1.0000e+00 hypermethylated 0.4631487 6.7910e-08 hypermethylated 4.5274e-06 hypermethylated 0.761471 0.539432 0.20816240 6 0.699071 0.647254 0.0518171 8.3696e-08 7.9079e-01 hypermethylated 9.2995e-06 1.0000000 hypermethylated 2.1659e-03 0.7571114 weaklyHypermeth 0.09024394 1 weaklyHypermeth 0.05459728 0.4341666 insignificant 1.00000 insignificant 0.191277 0.539432 -0.3643258 6 0.211341 0.647254 -0.4359122 1.0000e+00 7.4224e-17 hypomethylated 1.0000e+00 6.1854e-15 hypomethylated 1.0000e+00 1.5536e-08 hypomethylated 1.0000e+00 1.5536e-06 hypomethylated -0.4085514 4.7961e-04 hypomethylated 0.0228386 hypomethylated chr17 35731418 35732418 142187 RARA ENSG00000131759 0.778803 108 7 0.6401186 297 7 0.764114 199 8 0.831539 124 6 0.661851 147 8 0.757941 265 6 0.818052 177 8 0.625869 218 8 0.785218 126 8 0.872671 127 8 0.81541 373 8 0.604841 94 6 0.676636 191 8 0.625000 80 5 0.777078 117 8 0.717031 60 5 0.732639 66 3 0.473462 122 7 0.744380 483 8 0.645440 185 7 0.808715 142 7 0.490079 56 6 0.710936 124 6 0.821869 119 7 0.569786 97 4 0.770888 379 8 0.682639 113 7 0.752832 89 5 0.794989 295 8 0.708255 382 9 0.747296 485 8 0.845416 188 7 0.0532254 347 8 0.054539 228 8 0.1700801 352 7 0.052760 121 5 0.078373 313 8 0.0638334 443 8 0.7525866 151 7 0.523976 167 7 0.859798 62 4 0.709023 85 6 0.698597 67 4 0.769346 0.615043 0.706721 0.784275 0.612191 0.700715 0.747366 0.714493 0.742908 0.796418 0.808645 0.681529 0.609292 0.638728 0.717409 0.636275 0.653294 0.516647 0.680698 0.698333 0.638187 0.453145 0.775478 0.789071 0.620054 0.698174 0.586446 0.757281 0.741153 0.606918 0.672879 0.820598 0.0186361 0.044865 0.01111237 0.056869 0.092677 0.030281 0.6087805 0.480297 0.774116 0.631962 0.533569 3 0.700338 0.685298 -0.0035012 8 0.636945 0.777636 -0.14069070 0.7507786 2.0032e-01 insignificant 1 1.000000 insignificant 0.982853 0.0564324 insignificant 1 1.00000 insignificant -0.00790370 0.833750 insignificant 1 insignificant 0.700422 0.064302 0.6430262 8 0.682400 0.091202 0.59119785 2.7689e-79 1.0000e+00 hypermethylated 6.9222e-77 1.0000e+00 hypermethylated 6.3072e-19 1.0000e+00 hypermethylated 9.0103e-17 1.0000e+00 hypermethylated 0.6386029 6.7185e-15 hypermethylated 1.1198e-12 hypermethylated 0.701043 0.537594 0.12578829 6 0.750711 0.676624 0.07408649 9.0072e-04 9.9875e-01 weaklyHypermeth 2.7208e-02 1.0000000 weaklyHypermeth 1.7952e-01 0.65313101 insignificant 1.0000e+00 1.00000 insignificant 0.0086086 0.8883452 insignificant 1.00000 insignificant 0.685043 0.064337 0.6297265 8 0.755400 0.100322 0.6550774 1.1078e-55 1.0000e+00 hypermethylated 2.7694e-53 1.0000e+00 hypermethylated 2.3011e-17 1.0000e+00 hypermethylated 3.8351e-15 1.0000e+00 hypermethylated 0.6465066 4.5819e-12 hypermethylated 1.6592e-09 hypermethylated 0.684937 0.537594 0.10639349 6 0.756000 0.676624 0.0793751 8.6229e-04 9.8027e-01 weaklyHypermeth 2.6130e-02 1.0000000 weaklyHypermeth 2.5576e-01 0.8642002 insignificant 1.00000000 1 insignificant 0.01651233 0.7985734 insignificant 1.00000 insignificant 0.064373 0.537594 -0.4920841 6 0.111469 0.676624 -0.5651553 1.0000e+00 6.3228e-29 hypomethylated 1.0000e+00 3.1614e-26 hypomethylated 1.0000e+00 3.3812e-12 hypomethylated 1.0000e+00 1.6906e-09 hypomethylated -0.6299943 1.1669e-04 hypomethylated 0.0106077 hypomethylated chr17 35741478 35742478 142192 RARA ENSG00000131759 0.773111 352 10 0.6123120 157 10 0.751201 170 10 0.822136 272 10 0.810648 75 8 0.825881 530 10 0.744102 97 7 0.725527 209 11 0.784276 113 9 0.911457 157 10 0.83108 347 12 0.821429 45 6 0.856963 224 9 0.860608 110 8 0.881818 134 9 0.918367 23 1 0.805556 17 1 0.709710 453 10 0.835463 640 11 0.767381 368 11 0.794598 167 10 0.776774 110 9 0.742377 121 10 0.606998 126 8 0.847664 264 9 0.872159 295 11 0.865007 252 10 0.600694 60 5 0.838183 283 10 0.851501 267 11 0.841151 444 11 0.873600 335 11 0.0847721 361 10 0.068411 431 10 0.0238095 342 8 0.177808 142 8 0.114657 205 9 0.3413871 534 10 0.6530431 147 10 0.688989 344 10 0.757365 199 8 0.710727 262 9 0.347655 290 10 0.884340 0.756122 0.801808 0.897157 0.814124 0.847872 0.729950 0.853063 0.761415 0.912435 0.873510 0.817949 0.869232 0.881494 0.895879 0.859300 0.831101 0.797175 0.868215 0.862624 0.794158 0.830503 0.792952 0.693898 0.883211 0.886671 0.897578 0.749038 0.848989 0.836508 0.854171 0.898772 0.0714890 0.087329 0.04281574 0.198225 0.156424 0.228142 0.7124898 0.713532 0.781950 0.773053 0.388859 6 0.849321 0.837619 0.0033242 10 0.742246 0.747132 -0.00488574 0.5651190 1.5078e-01 insignificant 1 1.000000 insignificant 0.629203 0.6955991 insignificant 1 1.00000 insignificant 0.00989275 0.763049 insignificant 1 insignificant 0.849510 0.118610 0.7250655 10 0.799342 0.113012 0.68632980 6.0259e-114 1.0000e+00 hypermethylated 3.0130e-111 1.0000e+00 hypermethylated 7.1985e-26 1.0000e+00 hypermethylated 3.5992e-23 1.0000e+00 hypermethylated 0.6673107 6.7087e-06 hypermethylated 3.0494e-04 hypermethylated 0.849510 0.677939 0.18008301 10 0.799342 0.607567 0.19177469 8.4095e-21 9.9999e-01 weaklyHypermeth 4.2047e-18 1.0000000 weaklyHypermeth 3.6750e-07 0.99971169 weaklyHypermeth 6.1249e-05 1.00000 weaklyHypermeth 0.1708957 0.0781074 insignificant 1.00000 insignificant 0.837927 0.118610 0.7207379 10 0.804603 0.113012 0.6915914 4.0379e-83 1.0000e+00 hypermethylated 4.0379e-80 1.0000e+00 hypermethylated 1.1974e-22 1.0000e+00 hypermethylated 5.9870e-20 1.0000e+00 hypermethylated 0.6574179 8.4986e-07 hypermethylated 5.3117e-05 hypermethylated 0.837927 0.677939 0.18166329 10 0.804603 0.607567 0.1970363 2.5779e-15 1.0000e+00 weaklyHypermeth 2.5779e-12 1.0000000 weaklyHypermeth 1.0363e-06 0.9999924 weaklyHypermeth 0.00051815 1 weaklyHypermeth 0.16100296 0.0919789 insignificant 1.00000 insignificant 0.118610 0.677939 -0.5483498 10 0.113012 0.607567 -0.4945551 1.0000e+00 1.7505e-22 hypomethylated 1.0000e+00 2.9175e-20 hypomethylated 1.0000e+00 5.0923e-12 hypomethylated 1.0000e+00 1.6974e-09 hypomethylated -0.4964149 7.1483e-04 hypomethylated 0.0285549 hypomethylated chr17 35741823 35742823 142193 RARA ENSG00000131759 0.765806 313 9 0.6831140 148 9 0.776321 162 9 0.815778 237 9 0.854040 72 8 0.830460 481 9 0.718512 96 7 0.750273 195 10 0.822703 108 8 0.903407 151 9 0.83784 323 11 0.801587 44 6 0.878051 216 8 0.883032 99 7 0.920000 122 8 0.904762 21 1 0.805556 17 1 0.736495 410 9 0.846951 585 10 0.771806 340 10 0.811278 149 9 0.813871 85 8 0.761381 106 9 0.628397 120 7 0.878395 160 8 0.892756 279 10 0.876507 244 9 0.620833 57 5 0.862433 276 9 0.873354 249 10 0.880001 415 10 0.881049 311 10 0.0924787 326 9 0.074630 391 9 0.0267857 313 7 0.200034 77 7 0.124212 182 8 0.3610586 494 9 0.7183474 132 9 0.728940 306 9 0.795913 172 7 0.755509 236 8 0.354190 264 9 0.886027 0.772959 0.815141 0.897662 0.835364 0.851069 0.718020 0.871816 0.777381 0.908566 0.878967 0.809906 0.880022 0.892323 0.913368 0.853084 0.837774 0.812871 0.875244 0.869177 0.802244 0.845987 0.804421 0.680375 0.899715 0.898231 0.904098 0.737952 0.861250 0.846466 0.873626 0.903503 0.0746471 0.091187 0.04470720 0.206982 0.163334 0.232699 0.7439653 0.732266 0.801768 0.793611 0.394143 6 0.863285 0.868163 -0.0076032 9 0.808662 0.824605 -0.01594372 0.7835506 5.9412e-02 insignificant 1 1.000000 insignificant 0.503652 0.5392244 insignificant 1 1.00000 insignificant 0.00030350 0.992453 insignificant 1 insignificant 0.863285 0.131239 0.7301410 9 0.808662 0.120634 0.68802826 7.4618e-107 1.0000e+00 hypermethylated 2.4873e-104 1.0000e+00 hypermethylated 2.0842e-23 1.0000e+00 hypermethylated 6.9472e-21 1.0000e+00 hypermethylated 0.6687917 1.3416e-05 hypermethylated 5.5900e-04 hypermethylated 0.863285 0.727027 0.15797896 9 0.808662 0.636102 0.17256021 1.5529e-17 9.9995e-01 weaklyHypermeth 5.1764e-15 1.0000000 weaklyHypermeth 2.3464e-05 0.99904183 weaklyHypermeth 1.9553e-03 1.00000 weaklyHypermeth 0.1447449 0.1460197 insignificant 1.00000 insignificant 0.868163 0.131239 0.7406225 9 0.824605 0.120634 0.7039720 4.7046e-77 1.0000e+00 hypermethylated 1.5682e-74 1.0000e+00 hypermethylated 1.5089e-20 1.0000e+00 hypermethylated 5.0297e-18 1.0000e+00 hypermethylated 0.6684882 1.5501e-06 hypermethylated 8.1583e-05 hypermethylated 0.868163 0.727027 0.16724251 9 0.824605 0.636102 0.1885039 5.1181e-13 9.9998e-01 weaklyHypermeth 2.5591e-10 1.0000000 weaklyHypermeth 3.9463e-05 0.9999639 weaklyHypermeth 0.00438476 1 weaklyHypermeth 0.14444139 0.1498067 insignificant 1.00000 insignificant 0.131239 0.727027 -0.5848203 9 0.120634 0.636102 -0.5154680 1.0000e+00 2.0247e-20 hypomethylated 1.0000e+00 2.8925e-18 hypomethylated 1.0000e+00 3.2138e-11 hypomethylated 1.0000e+00 7.9499e-09 hypomethylated -0.5240468 9.3341e-04 hypomethylated 0.0321865 hypomethylated chr17 35861991 35862991 142198 IGFBP4 ENSG00000141753 0.803252 105 5 0.9187184 128 7 0.935788 163 7 0.941667 87 5 0.938891 139 7 0.962649 319 5 0.811469 183 7 0.860111 124 7 0.970899 119 5 0.963207 140 5 0.91455 188 7 0.910342 171 7 0.870192 89 5 1.000000 43 3 0.973810 158 5 0.951863 118 5 0.729444 77 3 0.973545 89 5 0.960566 238 7 0.829698 177 5 0.625457 96 7 0.928571 50 3 0.925000 107 7 0.815491 69 5 0.904762 42 4 0.975533 140 7 0.890590 103 7 0.797917 55 6 0.934292 130 7 0.984109 199 7 0.911000 179 7 0.988889 149 7 0.9137535 121 7 0.940476 91 5 0.8333333 40 5 1.000000 2 0 0.748880 106 6 0.9149369 112 7 0.9285714 97 5 0.950340 89 5 0.986667 68 5 0.987578 82 3 0.987578 90 4 0.899691 0.924371 0.910908 0.921197 0.917008 0.942670 0.935475 0.958833 0.984338 0.927714 0.927030 0.948442 0.984656 0.997659 0.973848 0.991559 0.843031 0.955674 0.960689 0.908251 0.892404 0.986702 0.913564 0.946804 0.933333 0.969296 0.896526 0.978103 0.969579 0.986399 0.903008 0.987145 0.9653415 0.988918 0.92988395 0.962461 0.948848 0.958242 0.9867021 0.969985 0.979056 0.979186 0.979186 3 0.937653 0.937074 -0.0036195 7 0.815525 0.816109 -0.00058352 0.4566833 3.4032e-01 insignificant 1 1.000000 insignificant 0.447918 0.4588046 insignificant 1 1.00000 insignificant 0.02089884 0.541768 insignificant 1 insignificant 0.938202 0.917373 0.0139878 6 0.819406 0.768166 0.05124074 4.1507e-06 8.2040e-02 weaklyHypermeth 5.9296e-05 1.0000e+00 weaklyHypermeth 8.0582e-01 7.7971e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0191364 6.4184e-01 insignificant 1.0000e+00 insignificant 0.938862 0.978873 -0.04257055 5 0.936465 0.966794 -0.03032931 9.7159e-01 3.0053e-04 weaklyHypometh 1.0000e+00 0.0601067 weaklyHypometh 9.9501e-01 0.00074879 weaklyHypometh 1.0000e+00 0.30348 insignificant -0.0571136 0.0107097 lowCoverage 0.48680 lowCoverage 0.937643 0.917373 0.0250069 6 0.832636 0.768166 0.0644701 8.9814e-04 5.6256e-01 weaklyHypermeth 1.1515e-02 1.0000e+00 weaklyHypermeth 7.4770e-01 3.7129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0017624 9.7047e-01 insignificant 1.0000e+00 insignificant 0.943338 0.978873 -0.03519045 5 0.935711 0.966794 -0.0310830 9.9276e-01 3.4745e-03 weaklyHypometh 1.0000e+00 0.8280133 insignificant 9.9172e-01 0.0023626 weaklyHypometh 1.00000000 1 insignificant -0.07801247 0.0286560 lowCoverage 1.00000 lowCoverage 0.925214 0.978873 -0.0566010 4 0.877904 0.966794 -0.0888902 6.1623e-01 1.5172e-04 lowCoverage 1.0000e+00 2.9229e-03 lowCoverage 5.9417e-01 7.2550e-02 lowCoverage 1.0000e+00 7.8859e-01 lowCoverage -0.0762501 9.0968e-02 lowCoverage 0.9781556 lowCoverage chr17 37446146 37447146 142233 ZNF385C ENSG00000187595 0.854175 257 5 0.8672443 224 6 0.857488 147 6 0.714040 275 5 0.905556 59 6 0.844525 434 5 0.840166 66 6 0.931187 132 6 0.930601 101 6 0.964372 78 5 0.90855 238 6 0.963719 38 4 0.991342 130 6 1.000000 37 3 0.797727 108 6 0.963636 24 2 0.914773 40 4 0.706126 496 5 0.947139 328 6 0.942037 330 6 0.974425 82 6 0.939056 84 5 0.887312 140 6 0.856397 74 5 0.947145 324 5 0.949794 290 6 0.787546 111 6 0.738095 35 3 0.978920 263 5 0.806123 292 6 0.936952 377 6 0.980356 278 6 0.7683043 150 6 0.821974 176 6 0.8115942 159 5 0.874820 96 5 0.726523 99 6 0.8940504 280 6 0.9639361 162 5 0.950701 249 6 0.924320 131 5 0.927195 258 5 0.905821 188 5 0.917065 0.881691 0.866741 0.934780 0.964368 0.931926 0.892739 0.907956 0.919651 0.966713 0.919140 0.926030 0.983132 0.968762 0.933352 0.920272 0.930965 0.889671 0.934405 0.934212 0.949363 0.921553 0.960828 0.918899 0.937534 0.962710 0.934445 0.936782 0.976318 0.942133 0.951612 0.967612 0.7966058 0.863435 0.81428877 0.898258 0.936335 0.885882 0.9407648 0.949099 0.890635 0.924901 0.888395 4 0.924251 0.951064 -0.0285378 6 0.774722 0.842647 -0.06792505 0.9754973 2.3478e-04 weaklyHypometh 1 0.046957 weaklyHypometh 0.994374 0.0259388 weaklyHypometh 1 1.00000 insignificant -0.00629005 0.836990 insignificant 1 insignificant 0.924534 0.850886 0.0738783 6 0.899722 0.818134 0.08158854 6.7194e-03 9.8684e-01 weaklyHypermeth 6.8565e-02 1.0000e+00 weaklyHypermeth 9.3623e-02 9.7079e-01 insignificant 9.2696e-01 1.0000e+00 insignificant 0.0760091 3.5871e-02 weaklyHypermeth 4.3219e-01 insignificant 0.925191 0.924089 -0.00074404 5 0.933016 0.946585 -0.01356951 8.9890e-01 6.0430e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.4698e-01 0.71520021 insignificant 1.0000e+00 1.00000 insignificant -0.0421745 0.0584206 insignificant 1.00000 insignificant 0.953886 0.850731 0.0997896 6 0.945168 0.792153 0.1530155 1.9155e-03 9.9916e-01 weaklyHypermeth 2.3078e-02 1.0000e+00 weaklyHypermeth 7.7824e-03 9.9127e-01 weaklyHypermeth 1.0240e-01 1.0000e+00 insignificant 0.0822992 3.5816e-02 weaklyHypermeth 4.2137e-01 insignificant 0.953846 0.923935 0.03019827 5 0.936030 0.937683 -0.0016532 3.1639e-03 8.2884e-01 weaklyHypermeth 8.5871e-02 1.0000000 weaklyHypermeth 9.2961e-03 0.9086682 weaklyHypermeth 0.27341425 1 insignificant -0.03588446 0.1894960 insignificant 1.00000 insignificant 0.852356 0.924089 -0.0714501 5 0.863581 0.946585 -0.0830040 9.5245e-01 1.0239e-01 insignificant 1.0000e+00 9.5687e-01 insignificant 8.1626e-01 1.5994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1181836 4.4007e-03 weaklyHypometh 0.0936326 weaklyHypometh chr17 37817220 37818220 142248 ENSG00000221020 0.954120 152 5 0.9512802 132 5 0.956528 146 5 0.866720 174 5 0.871016 73 5 0.879721 498 5 0.967949 89 5 0.900130 155 6 0.953251 164 5 0.873351 133 5 0.88380 99 5 0.928788 78 5 0.858836 158 5 0.959402 158 5 0.932706 197 5 0.935515 141 5 0.906984 42 5 0.930324 201 5 0.964555 146 5 0.969016 246 5 0.610000 25 2 0.828271 88 5 0.935378 151 5 0.937500 54 5 0.869076 51 5 0.918032 171 5 0.805556 69 3 0.798265 84 5 0.976052 136 5 0.963386 146 5 0.913978 197 5 0.894909 219 6 0.2828509 81 5 0.178571 53 5 0.0000000 9 1 0.812500 13 0 0.278737 153 6 0.6945899 147 6 0.9299659 135 5 0.912283 149 5 0.867950 120 5 0.923254 134 5 0.956019 122 5 0.944026 0.937291 0.946495 0.940043 0.862186 0.919129 0.969224 0.878236 0.943010 0.948266 0.879580 0.922433 0.929192 0.951397 0.920269 0.939267 0.902661 0.916493 0.954256 0.961885 0.611609 0.818561 0.918738 0.928483 0.859781 0.952180 0.746269 0.785320 0.969535 0.955417 0.895988 0.895193 0.1458283 0.012793 NA 0.658119 0.181978 0.684557 0.9150055 0.888973 0.858903 0.920611 0.948072 5 0.931804 0.899353 0.0293857 5 0.921968 0.907551 0.01441705 0.0853268 8.0155e-01 insignificant 1 1.000000 insignificant 0.150555 0.8272463 insignificant 1 1.00000 insignificant 0.05133288 0.115279 lowCoverage 1 lowCoverage 0.931804 0.355263 0.5885189 5 0.921968 0.405795 0.51617279 1.3409e-37 1.0000e+00 hypermethylated 8.9394e-36 1.0000e+00 hypermethylated 2.0493e-07 9.9998e-01 hypermethylated 7.0664e-06 1.0000e+00 hypermethylated 0.5476582 7.7561e-03 lowCoverage 1.1576e-01 lowCoverage 0.931804 0.916667 0.01852754 5 0.921968 0.924026 -0.00205797 5.4132e-02 5.5492e-01 insignificant 9.1749e-01 1.0000000 insignificant 1.6157e-01 0.59036327 insignificant 1.0000e+00 1.00000 insignificant 0.0043053 0.8046369 insignificant 1.00000 insignificant 0.899353 0.355263 0.5573569 5 0.907551 0.405795 0.5017557 1.3622e-20 1.0000e+00 hypermethylated 6.1917e-19 1.0000e+00 hypermethylated 7.2203e-06 1.0000e+00 hypermethylated 1.9514e-04 1.0000e+00 hypermethylated 0.4963253 1.0647e-02 lowCoverage 1.4996e-01 lowCoverage 0.899353 0.916667 -0.00424885 5 0.907551 0.924026 -0.0164750 7.2362e-01 3.9653e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.1836e-01 0.3238150 insignificant 1.00000000 1 insignificant -0.04702756 0.1693879 lowCoverage 1.00000 lowCoverage 0.355263 0.916667 -0.5722041 5 0.405795 0.924026 -0.5182308 1.0000e+00 4.7992e-12 hypomethylated 1.0000e+00 2.3996e-10 hypomethylated 1.0000e+00 1.2038e-04 hypomethylated 1.0000e+00 5.2341e-03 hypomethylated -0.5433529 7.8622e-03 lowCoverage 0.1455962 lowCoverage chr17 38273380 38274380 142267 AOC3 ENSG00000131471 0.762985 319 11 0.8473979 219 11 0.925819 210 11 0.931632 208 10 0.770155 139 10 0.904820 552 11 0.887829 271 10 0.909870 199 11 0.938914 154 11 0.971564 114 6 0.92379 423 11 0.889092 102 8 0.944926 182 10 0.812698 37 5 0.944998 217 9 0.852233 90 5 0.978261 140 5 0.885668 298 11 0.935712 444 11 0.940396 371 11 0.940479 135 10 0.912698 46 4 0.832559 174 11 0.955238 93 8 0.922640 252 8 0.953999 298 11 0.941951 162 11 0.820971 82 8 0.926951 199 11 0.939671 324 11 0.937043 508 11 0.923156 424 11 0.8200672 231 11 0.811070 326 11 0.9962963 239 7 0.852214 299 10 0.784825 145 11 0.8427727 302 11 0.8931579 262 11 0.957073 348 11 0.964996 232 10 0.899955 241 9 0.902429 205 11 0.931938 0.953028 0.932173 0.942380 0.914800 0.934709 0.921367 0.951321 0.944490 0.969152 0.943228 0.907584 0.912804 0.951379 0.950037 0.906434 0.977572 0.894558 0.947191 0.959585 0.946492 0.960101 0.934296 0.981655 0.935818 0.946083 0.953466 0.934506 0.946186 0.945016 0.943778 0.930720 0.8832442 0.783783 0.98088012 0.878969 0.899809 0.893001 0.9388228 0.966756 0.988491 0.936170 0.938044 4 0.922322 0.928970 -0.0129900 11 0.856684 0.941461 -0.08477754 0.9509557 2.1591e-02 weaklyHypometh 1 1.000000 insignificant 0.965916 0.0403741 weaklyHypometh 1 1.00000 insignificant -0.01934164 0.308976 insignificant 1 insignificant 0.922683 0.872810 0.0468655 11 0.886408 0.880270 0.00613713 1.7747e-04 9.9735e-01 weaklyHypermeth 2.3049e-03 1.0000e+00 weaklyHypermeth 7.1753e-03 9.9608e-01 weaklyHypermeth 9.3186e-02 1.0000e+00 weaklyHypermeth 0.0467305 2.0523e-01 insignificant 1.0000e+00 insignificant 0.922502 0.935559 -0.00532368 11 0.886408 0.933865 -0.04745721 7.5871e-01 2.1429e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 6.9808e-01 0.04773609 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0255842 0.2396602 insignificant 1.00000 insignificant 0.928943 0.872244 0.0630103 11 0.941461 0.812557 0.1289041 4.6080e-04 1.0000e+00 weaklyHypermeth 6.1440e-03 1.0000e+00 weaklyHypermeth 4.8268e-03 9.9999e-01 weaklyHypermeth 6.8954e-02 1.0000e+00 weaklyHypermeth 0.0660721 8.7817e-02 insignificant 8.6095e-01 insignificant 0.928917 0.935559 0.00883159 11 0.936583 0.933865 0.0027185 4.8101e-01 1.8110e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.2930e-01 0.1323904 insignificant 1.00000000 1 insignificant -0.00624259 0.7618405 insignificant 1.00000 insignificant 0.872727 0.935509 -0.0461000 11 0.869386 0.927852 -0.0584665 9.9661e-01 4.2960e-04 weaklyHypometh 1.0000e+00 7.1600e-03 weaklyHypometh 9.9071e-01 2.3878e-03 weaklyHypometh 1.0000e+00 5.0804e-02 weaklyHypometh -0.0723147 7.1357e-02 insignificant 0.8048548 insignificant chr17 39030184 39031184 142294 ETV4 ENSG00000175832 0.821282 206 6 0.7173149 132 6 0.669782 100 6 0.808515 158 6 0.808712 47 4 0.812708 278 7 0.636869 90 4 0.812781 113 6 0.756186 72 5 0.813159 90 6 0.76509 187 6 0.802083 53 4 0.655263 108 6 0.809524 28 3 0.718009 128 6 0.598944 50 4 0.627706 55 4 0.822366 138 6 0.735782 125 6 0.816506 208 6 0.683333 31 3 0.704630 52 4 0.855560 132 6 0.650000 42 4 0.669753 26 1 0.770213 139 6 0.786376 60 4 0.897436 39 3 0.793572 89 6 0.801103 142 6 0.755119 189 6 0.817695 293 6 0.8021978 96 6 0.538432 86 6 0.6621566 139 6 0.739478 43 4 0.728896 65 5 0.7349663 153 6 0.8285581 215 6 0.800432 190 6 0.859853 165 6 0.765997 169 6 0.825340 176 6 0.863732 0.776079 0.740690 0.845756 0.859895 0.865703 0.743274 0.799500 0.841276 0.859507 0.836148 0.769360 0.749069 0.803697 0.817341 0.721181 0.726996 0.871309 0.790010 0.902042 0.776423 0.793445 0.820320 0.768902 0.671917 0.853971 0.878000 0.861202 0.814863 0.854936 0.854506 0.823562 0.7722795 0.587306 0.80933342 0.851272 0.794603 0.740167 0.8822685 0.874919 0.877401 0.874846 0.889340 3 0.789518 0.812804 -0.0216670 6 0.759868 0.788071 -0.02820317 0.9296833 3.1313e-01 insignificant 1 1.000000 insignificant 0.979448 0.4251082 insignificant 1 1.00000 insignificant -0.01497014 0.594340 lowCoverage 1 lowCoverage 0.789518 0.757732 0.0309924 6 0.759868 0.667747 0.09212103 1.1970e-01 6.2614e-01 insignificant 9.2080e-01 1.0000e+00 insignificant 4.8565e-01 9.5818e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0494078 2.6509e-01 insignificant 1.0000e+00 insignificant 0.789518 0.842623 -0.05451631 6 0.759868 0.810628 -0.05075977 9.9105e-01 2.2979e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9652e-01 0.03227498 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0656073 0.0124990 weaklyHypometh 0.50819 insignificant 0.812804 0.757732 0.0514165 6 0.788071 0.667747 0.1203242 1.4035e-01 9.2986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9492e-01 9.8336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0643779 1.7219e-01 lowCoverage 1.0000e+00 lowCoverage 0.812804 0.842623 -0.03265265 6 0.788071 0.810628 -0.0225566 9.6465e-01 2.9733e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8585e-01 0.3772363 insignificant 1.00000000 1 insignificant -0.05063712 0.0808429 lowCoverage 1.00000 lowCoverage 0.757732 0.842623 -0.0846539 6 0.667747 0.810628 -0.1428808 9.8921e-01 1.2476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9967e-01 1.2522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1150150 2.6116e-02 weaklyHypometh 0.3582267 insignificant chr17 39543685 39544685 142320 HDAC5 ENSG00000108840 0.064935 164 4 0.1696970 172 9 0.117587 247 7 0.103515 193 4 0.123457 76 4 0.474553 272 7 0.091858 111 6 0.242532 87 4 0.051587 50 4 0.183673 45 4 0.12607 118 6 0.031746 31 3 0.326331 54 3 0.130476 50 4 0.106537 73 4 0.200000 18 1 NA 0 0 0.051236 318 4 0.406667 147 4 0.207602 240 7 0.156250 70 4 0.225000 77 3 0.299383 48 4 0.229437 43 4 0.437581 309 4 0.110737 162 7 0.197143 86 4 0.222222 29 2 0.071579 97 4 0.125708 155 7 0.153183 268 9 0.059091 162 4 0.0324074 170 9 0.010753 102 4 0.0053191 78 4 0.000000 79 3 0.218182 85 6 0.0000000 177 7 0.2322552 128 4 0.227005 145 4 0.152638 155 4 0.202742 116 4 0.099881 153 4 0.144781 0.164321 0.268488 0.214058 0.020988 0.355521 0.104517 0.191279 0.098236 0.338036 0.146059 0.074074 0.091285 0.165150 0.085726 0.157053 NA 0.145541 0.140741 0.249144 0.183796 0.280741 0.224074 0.082828 0.256156 0.206467 0.117778 0.000000 0.114620 0.195635 0.140400 0.139057 0.0138889 0.018638 0.02325987 0.000000 0.075892 0.000000 0.3414296 0.346999 0.315680 0.254690 0.273133 3 0.145994 0.117530 0.0053191 4 0.167330 0.183166 -0.01583663 0.1829833 7.3672e-01 lowCoverage 1 1.000000 lowCoverage 0.743941 0.8213874 lowCoverage 1 1.00000 lowCoverage -0.02165913 0.602202 lowCoverage 1 lowCoverage 0.145714 0.021708 0.1232114 4 0.175829 0.067481 0.10834729 6.5684e-06 9.8542e-01 lowCoverage 9.2512e-05 1.0000e+00 lowCoverage 3.6063e-03 9.9799e-01 lowCoverage 5.0793e-02 1.0000e+00 lowCoverage 0.1245069 1.6619e-02 lowCoverage 2.2459e-01 lowCoverage 0.145484 0.249641 -0.09772649 4 0.161510 0.216434 -0.05492389 1.2126e-01 2.4216e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.8303e-01 0.10710675 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0139538 0.7140735 lowCoverage 1.00000 lowCoverage 0.117412 0.021708 0.1150996 7 0.187291 0.067481 0.1198097 4.3408e-04 9.9753e-01 weaklyHypermeth 5.8659e-03 1.0000e+00 weaklyHypermeth 2.5569e-02 9.9996e-01 weaklyHypermeth 2.8098e-01 1.0000e+00 insignificant 0.1461660 8.2125e-03 lowCoverage 1.2758e-01 lowCoverage 0.117647 0.249641 -0.08376564 4 0.204318 0.216434 -0.0121164 3.8560e-01 3.2215e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.7385e-01 0.1632812 lowCoverage 1.00000000 1 lowCoverage 0.00770534 0.8475888 lowCoverage 1.00000 lowCoverage 0.021771 0.249641 -0.2224498 4 0.073616 0.216434 -0.1428179 9.9156e-01 3.8202e-05 lowCoverage 1.0000e+00 8.2019e-04 lowCoverage 9.9961e-01 6.8496e-02 lowCoverage 1.0000e+00 7.6106e-01 lowCoverage -0.1384607 1.1294e-02 lowCoverage 0.1914221 lowCoverage chr17 39906095 39907095 142343 ENSG00000210705 0.652423 236 7 0.6397554 202 7 0.572846 170 7 0.654242 170 7 0.695971 96 7 0.643718 401 7 0.490902 141 7 0.689587 116 7 0.579616 68 5 0.650516 103 7 0.57036 209 7 0.544295 61 5 0.594628 172 7 0.762581 34 4 0.692471 113 7 0.697779 42 3 0.693681 149 5 0.525215 134 7 0.759209 153 7 0.607355 326 7 0.595663 53 6 0.732143 64 6 0.519100 169 7 0.610832 77 6 0.609253 53 6 0.656491 204 7 0.659359 88 6 0.781293 51 4 0.582341 124 7 0.680244 212 7 0.724678 238 7 0.517852 406 7 0.6508198 140 7 0.519930 113 7 0.6051855 152 7 0.371429 45 3 0.584606 95 7 0.6265086 224 7 0.6519968 241 7 0.707516 289 7 0.596956 178 7 0.719198 187 5 0.622660 261 7 0.704295 0.675995 0.640145 0.683047 0.785914 0.763240 0.663517 0.790128 0.657050 0.744379 0.708773 0.656350 0.694373 0.680538 0.741893 0.721689 0.748001 0.676570 0.760595 0.736017 0.679148 0.773319 0.682864 0.601123 0.672998 0.692008 0.736757 0.730599 0.720221 0.746718 0.751988 0.701538 0.6412976 0.581374 0.68979178 0.528384 0.629681 0.684950 0.7223498 0.723136 0.673616 0.761400 0.741028 4 0.729328 0.706559 0.0007601 7 0.601560 0.624372 -0.02281163 0.5612638 4.6720e-01 insignificant 1 1.000000 insignificant 0.737834 0.3811768 insignificant 1 1.00000 insignificant -0.00324629 0.911850 insignificant 1 insignificant 0.729328 0.652344 0.0538689 7 0.601560 0.626079 -0.02451864 9.4061e-03 9.7340e-01 weaklyHypermeth 9.0443e-02 1.0000e+00 weaklyHypermeth 7.8411e-03 9.9829e-01 weaklyHypermeth 9.9254e-02 1.0000e+00 weaklyHypermeth 0.0761114 1.3681e-01 insignificant 1.0000e+00 insignificant 0.730421 0.701906 0.00315239 7 0.649882 0.605516 0.04436579 2.0697e-01 1.7633e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.8144e-01 0.09313708 insignificant 1.0000e+00 1.00000 insignificant -0.0238076 0.4326017 insignificant 1.00000 insignificant 0.706153 0.652796 0.0512970 7 0.567611 0.660072 -0.0924609 5.6200e-02 9.9195e-01 insignificant 4.8870e-01 1.0000e+00 insignificant 2.4747e-02 9.9961e-01 weaklyHypermeth 2.7540e-01 1.0000e+00 insignificant 0.0793577 1.3601e-01 insignificant 1.0000e+00 insignificant 0.706628 0.702422 0.01304776 7 0.574372 0.644964 -0.0705925 1.8076e-01 2.7380e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6709e-01 0.3065560 insignificant 1.00000000 1 insignificant -0.02056128 0.5513688 insignificant 1.00000 insignificant 0.656209 0.702422 -0.0511114 7 0.726079 0.644964 0.0811145 9.9922e-01 1.3270e-02 weaklyHypometh 1.0000e+00 1.6183e-01 insignificant 9.9993e-01 1.2812e-02 weaklyHypometh 1.0000e+00 1.8569e-01 insignificant -0.0999189 7.2437e-02 insignificant 0.8048548 insignificant chr17 40040894 40041894 142353 FZD2 ENSG00000180340 0.419844 187 5 0.1947712 118 5 0.353056 132 5 0.224822 189 5 0.283287 44 4 0.258730 386 5 0.312912 102 5 0.246779 122 5 0.292109 119 5 0.513199 89 5 0.47769 151 5 0.252524 87 5 0.227760 152 5 NA 0 0 0.317474 124 5 0.307059 48 5 0.122301 139 5 0.172234 236 5 0.538660 147 5 0.187430 336 5 0.458047 69 5 0.146377 166 5 0.432962 178 5 0.224681 55 4 0.157576 78 5 0.294400 179 5 0.196166 99 5 0.292473 51 3 0.446304 101 5 0.301603 185 5 0.548532 227 5 0.347992 296 5 0.0460207 170 5 0.062903 86 5 0.0071429 37 1 0.000000 82 5 0.070769 64 5 0.0111406 186 5 0.2123188 232 5 0.092833 208 5 0.165239 175 5 0.126089 208 5 0.215152 232 5 0.364973 0.195322 0.327596 0.170464 0.303322 0.254314 0.303539 0.296778 0.315077 0.407645 0.525612 0.241396 0.206754 NA 0.282696 0.265277 0.110182 0.138167 0.508371 0.171563 0.506525 0.124092 0.397378 0.256740 0.198722 0.273234 0.169206 0.275919 0.378815 0.284157 0.481158 0.346211 0.0357584 0.057114 0.01612473 0.000000 0.071020 0.008487 0.1596833 0.070219 0.103007 0.090791 0.175744 4 0.284732 0.334917 -0.0573387 5 0.291823 0.346362 -0.05453872 0.9732479 2.4475e-02 weaklyHypometh 1 1.000000 insignificant 0.744730 0.2169967 insignificant 1 1.00000 insignificant -0.02045371 0.659464 lowCoverage 1 lowCoverage 0.284732 0.028800 0.2453043 5 0.291823 0.031465 0.26035849 1.6787e-14 1.0000e+00 hypermethylated 4.4177e-13 1.0000e+00 hypermethylated 1.2207e-12 1.0000e+00 hypermethylated 1.0173e-10 1.0000e+00 hypermethylated 0.2671428 4.7491e-09 lowCoverage 2.9682e-07 lowCoverage 0.284732 0.136493 0.14196125 5 0.291823 0.162152 0.12967130 1.2567e-05 9.8913e-01 weaklyHypermeth 6.2834e-04 1.0000000 weaklyHypermeth 3.1363e-07 0.97000721 weaklyHypermeth 6.1249e-05 1.00000 weaklyHypermeth 0.1378126 0.0015717 lowCoverage 0.15717 lowCoverage 0.334917 0.028800 0.2967093 5 0.346362 0.031465 0.3148972 9.5265e-15 1.0000e+00 hypermethylated 3.2850e-13 1.0000e+00 hypermethylated 6.2954e-10 1.0000e+00 hypermethylated 3.9346e-08 1.0000e+00 hypermethylated 0.2875966 5.2713e-06 lowCoverage 2.2919e-04 lowCoverage 0.334917 0.136493 0.20136012 5 0.346362 0.162152 0.1842100 6.9361e-07 9.8774e-01 hypermethylated 6.2714e-05 1.0000000 hypermethylated 6.1790e-06 0.9528807 hypermethylated 0.00154474 1 hypermethylated 0.15826632 0.0027871 lowCoverage 0.30968 lowCoverage 0.028800 0.136493 -0.1065718 5 0.031465 0.162152 -0.1306872 1.0000e+00 4.9603e-09 weaklyHypometh 1.0000e+00 1.8371e-07 weaklyHypometh 1.0000e+00 7.4104e-06 weaklyHypometh 1.0000e+00 3.9002e-04 weaklyHypometh -0.1293302 2.8608e-03 lowCoverage 0.0733529 lowCoverage chr17 40060617 40061617 142355 FZD2 ENSG00000180340 0.067460 53 3 0.0921324 116 5 0.251220 129 5 0.022222 92 5 0.286695 110 3 0.087534 296 5 0.146446 184 5 0.058369 92 5 0.127529 104 5 0.075294 162 5 0.14486 114 5 0.138611 79 3 0.046182 95 3 0.188667 82 3 0.020245 162 5 0.185714 90 3 NA 0 0 0.202003 179 5 0.160974 264 5 0.043577 246 5 0.263497 45 3 0.060606 33 3 0.106253 135 5 0.200000 12 0 0.114356 47 3 0.024512 147 5 0.094039 166 5 0.087302 64 3 0.064246 141 5 0.055943 176 5 0.021217 339 5 0.179859 191 5 0.4569615 125 5 0.600488 143 5 1.0000000 158 3 0.000000 20 2 0.575000 57 3 0.3522513 289 5 0.0052632 128 5 0.043369 116 5 0.035294 56 3 0.041241 151 3 0.122381 73 5 0.126279 0.036688 0.321343 0.034294 0.266923 0.133616 0.215112 0.085543 0.164993 0.115877 0.240140 0.126674 0.086270 0.157701 0.030488 0.291336 NA 0.186482 0.208337 0.054158 0.408327 0.063267 0.106267 0.328704 0.142004 0.033952 0.108435 0.158657 0.097616 0.084722 0.025906 0.218330 0.6563138 0.855206 1.00000000 0.723184 0.785417 0.508409 0.0086501 0.076533 0.055828 0.059711 0.144632 3 0.144911 0.102273 0.0414923 5 0.104564 0.070928 0.03363595 0.0361096 9.9990e-01 weaklyHypermeth 1 1.000000 insignificant 0.140640 0.9983035 insignificant 1 1.00000 insignificant 0.01747411 0.532231 lowCoverage 1 lowCoverage 0.144911 0.670455 -0.5486733 5 0.104564 0.445877 -0.34131339 1.0000e+00 2.3573e-24 hypomethylated 1.0000e+00 7.8575e-22 hypomethylated 1.0000e+00 2.1113e-07 hypomethylated 1.0000e+00 7.0376e-05 hypomethylated -0.3739903 3.8153e-02 lowCoverage 4.5100e-01 lowCoverage 0.144911 0.061069 0.08404219 5 0.104564 0.039034 0.06552936 4.4962e-03 9.9996e-01 weaklyHypermeth 1.0705e-01 1.0000000 insignificant 8.4557e-03 0.99981645 weaklyHypermeth 2.6424e-01 1.00000 insignificant 0.0739501 0.0160051 lowCoverage 0.61558 lowCoverage 0.102273 0.670455 -0.5870859 5 0.070928 0.445877 -0.3749493 1.0000e+00 6.8177e-18 hypomethylated 1.0000e+00 2.2726e-15 hypomethylated 1.0000e+00 1.0301e-06 hypomethylated 1.0000e+00 2.5752e-04 hypomethylated -0.3914644 3.2523e-02 lowCoverage 3.9184e-01 lowCoverage 0.102273 0.061069 0.04240916 5 0.070928 0.039034 0.0318934 4.4157e-01 9.8835e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.1065e-01 0.9881351 insignificant 1.00000000 1 insignificant 0.05647598 0.0725655 lowCoverage 1.00000 lowCoverage 0.670455 0.061069 0.6370329 5 0.445877 0.039034 0.4068428 3.3582e-10 1.0000e+00 hypermethylated 7.6518e-08 1.0000e+00 hypermethylated 1.8674e-05 1.0000e+00 hypermethylated 3.7348e-03 1.0000e+00 hypermethylated 0.4479404 2.0065e-02 lowCoverage 0.2826113 lowCoverage chr17 40204443 40205443 142364 ADAM11 ENSG00000073670 0.817684 495 13 0.6551374 364 13 0.805057 293 13 0.822896 423 13 0.719609 132 9 0.730300 866 14 0.692287 243 14 0.867458 255 14 0.838954 245 13 0.833417 229 13 0.80486 457 14 0.672213 130 9 0.822865 308 14 0.754686 84 5 0.799885 284 13 0.761905 60 3 0.669147 435 9 0.801150 575 14 0.812517 448 13 0.845595 718 14 0.809119 219 13 0.819589 239 14 0.739388 331 14 0.781067 179 13 0.775691 381 13 0.796449 387 14 0.639021 262 13 0.762381 125 9 0.849147 317 12 0.741046 393 14 0.782112 669 14 0.787181 642 14 0.6332005 274 14 0.589945 351 14 0.7096850 252 11 0.460880 231 10 0.568508 199 8 0.7267488 430 14 0.7208490 384 14 0.727363 465 13 0.747979 365 11 0.792320 505 10 0.689282 447 13 0.844817 0.719551 0.802630 0.873246 0.808906 0.870097 0.821721 0.874102 0.846371 0.851469 0.839084 0.746455 0.813360 0.838701 0.887327 0.822708 0.757201 0.870567 0.877139 0.877737 0.901808 0.813733 0.819427 0.847442 0.804446 0.845932 0.810741 0.823041 0.860530 0.831865 0.813335 0.878082 0.6943231 0.656703 0.82691501 0.387210 0.769104 0.833111 0.8051681 0.841411 0.811325 0.844188 0.841783 6 0.845378 0.829993 0.0060975 14 0.726925 0.782424 -0.05549992 0.5449221 8.5061e-01 insignificant 1 1.000000 insignificant 0.631769 0.6242824 insignificant 1 1.00000 insignificant 0.00286535 0.892616 insignificant 1 insignificant 0.846701 0.694301 0.1415646 14 0.772357 0.621008 0.15134968 2.7687e-17 1.0000e+00 weaklyHypermeth 9.2291e-16 1.0000e+00 weaklyHypermeth 1.4971e-06 9.9997e-01 weaklyHypermeth 4.0463e-05 1.0000e+00 weaklyHypermeth 0.1615534 8.1649e-03 weaklyHypermeth 1.2007e-01 insignificant 0.845378 0.819778 0.02483556 13 0.726925 0.692015 0.03490954 1.1057e-01 9.7989e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.6786e-01 0.97598290 insignificant 1.0000e+00 1.00000 insignificant 0.0408226 0.0963110 insignificant 1.00000 insignificant 0.830955 0.694301 0.1375255 14 0.820909 0.621008 0.1999017 3.5889e-13 9.9998e-01 weaklyHypermeth 1.0876e-11 1.0000e+00 weaklyHypermeth 6.4925e-07 9.9882e-01 weaklyHypermeth 2.2810e-05 1.0000e+00 weaklyHypermeth 0.1586880 8.8270e-03 weaklyHypermeth 1.2981e-01 insignificant 0.829392 0.819021 0.01848855 13 0.738956 0.653570 0.0853867 4.1564e-01 9.6268e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.7595e-01 0.9185504 insignificant 1.00000000 1 insignificant 0.03795730 0.1256986 insignificant 1.00000 insignificant 0.694301 0.820537 -0.1129025 13 0.621008 0.735266 -0.1142583 9.9991e-01 3.1421e-05 weaklyHypometh 1.0000e+00 6.9824e-04 weaklyHypometh 9.9999e-01 6.7023e-03 weaklyHypometh 1.0000e+00 1.0987e-01 insignificant -0.1207307 2.9018e-02 weaklyHypometh 0.3869090 insignificant chr17 40212006 40213006 142365 ADAM11 ENSG00000073670 0.329813 623 15 0.2898956 743 15 0.198219 863 15 0.294553 590 15 0.241334 588 17 0.280005 1350 15 0.253646 730 17 0.216033 717 15 0.275516 788 15 0.200363 871 15 0.23763 773 16 0.249946 571 15 0.227571 711 15 0.155182 448 12 0.256520 1023 15 0.278286 555 13 0.297060 226 11 0.351757 626 15 0.182666 1156 15 0.333615 1168 15 0.200993 290 13 0.268196 450 13 0.330670 593 15 0.258135 396 19 0.304956 286 13 0.403516 918 15 0.166082 811 16 0.274536 436 15 0.283996 783 12 0.265995 1057 15 0.288245 1261 15 0.206550 898 15 0.0757812 627 15 0.046831 433 12 0.2485007 740 9 0.105861 134 8 0.179129 473 17 0.2346246 967 15 0.2517340 666 14 0.330886 681 15 0.269526 478 14 0.329399 539 12 0.319764 636 15 0.355841 0.260533 0.279755 0.315300 0.256725 0.333836 0.296830 0.310013 0.285988 0.286507 0.335996 0.322902 0.242348 0.352482 0.308590 0.249151 0.267082 0.350555 0.164866 0.291142 0.266128 0.239126 0.313912 0.331054 0.317798 0.325691 0.217093 0.246906 0.278066 0.290435 0.279828 0.321865 0.1220947 0.090759 0.18400861 0.135641 0.131736 0.208578 0.3257683 0.343608 0.253482 0.265756 0.325200 10 0.291281 0.280719 0.0048433 15 0.248856 0.265510 -0.01665385 0.6829199 9.3814e-01 insignificant 1 1.000000 insignificant 0.706906 0.9917485 insignificant 1 1.00000 insignificant -0.01350867 0.536353 insignificant 1 insignificant 0.291369 0.156491 0.1481637 15 0.239470 0.131778 0.10769181 3.7760e-23 9.6795e-01 weaklyHypermeth 1.7164e-21 1.0000e+00 weaklyHypermeth 3.3037e-13 1.0000e+00 weaklyHypermeth 3.0034e-11 1.0000e+00 weaklyHypermeth 0.1090260 2.3444e-02 weaklyHypermeth 2.9305e-01 insignificant 0.291390 0.333333 -0.02368899 14 0.273451 0.277772 -0.00432090 4.2193e-01 5.0685e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.8352e-01 0.79817487 insignificant 1.0000e+00 1.00000 insignificant -0.0427813 0.0651683 insignificant 1.00000 insignificant 0.280362 0.156491 0.1378778 15 0.263265 0.131778 0.1314871 2.4612e-20 9.3057e-01 weaklyHypermeth 1.0701e-18 1.0000e+00 weaklyHypermeth 8.2625e-11 9.9998e-01 weaklyHypermeth 6.3558e-09 1.0000e+00 weaklyHypermeth 0.1225346 1.4086e-02 weaklyHypermeth 1.8294e-01 insignificant 0.280846 0.333333 -0.02645965 14 0.297580 0.277772 0.0198083 6.1475e-01 2.4850e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.0814e-01 0.6467795 insignificant 1.00000000 1 insignificant -0.02927262 0.2536523 insignificant 1.00000 insignificant 0.155794 0.333333 -0.1808875 14 0.128303 0.277772 -0.1494686 9.9975e-01 6.9003e-13 weaklyHypometh 1.0000e+00 3.6317e-11 weaklyHypometh 1.0000e+00 3.5256e-06 weaklyHypometh 1.0000e+00 2.0739e-04 weaklyHypometh -0.1518073 5.2984e-03 weaklyHypometh 0.1103840 insignificant chr17 40336781 40337781 142372 CCDC103,FAM187A ENSG00000167131,ENSG00000214447 0.894662 225 7 0.8259470 245 7 0.861100 185 7 0.911367 199 7 0.833333 68 5 0.872651 506 7 0.850649 93 7 0.911560 188 7 0.883400 104 6 0.924185 104 7 0.81224 450 7 0.864286 44 3 0.958551 189 7 0.962963 76 4 0.940539 127 7 0.761722 54 4 0.766667 16 2 0.958918 283 7 0.805243 547 7 0.782077 341 7 0.818838 171 7 0.958917 97 5 0.908824 165 7 0.964714 112 5 0.853873 79 4 0.941764 304 7 0.817619 167 6 0.657584 57 4 0.857058 225 7 0.939031 296 7 0.854779 391 7 0.922574 306 7 0.8951605 184 7 0.970669 144 7 1.0000000 43 4 0.806250 46 4 0.818439 111 7 0.9177938 295 7 0.8788879 158 6 0.897932 228 7 0.893995 159 7 0.883141 129 6 0.879886 183 7 0.892948 0.851910 0.863986 0.934449 0.978992 0.921352 0.889292 0.892114 0.920306 0.950129 0.913354 0.902311 0.970026 0.929817 0.957824 0.712675 0.915238 0.974800 0.917629 0.892315 0.956927 0.940215 0.930874 0.943204 0.919270 0.946811 0.847763 0.878565 0.864116 0.939565 0.897396 0.926363 0.9156523 0.976590 0.96573758 0.840999 0.971371 0.869546 0.8504935 0.946847 0.890102 0.906782 0.867243 3 0.893670 0.906751 -0.0163639 7 0.852890 0.839301 0.01358878 0.2743322 2.6680e-01 insignificant 1 1.000000 insignificant 0.440620 0.3374505 insignificant 1 1.00000 insignificant -0.00552826 0.849579 insignificant 1 insignificant 0.893670 0.912515 -0.0196291 7 0.852890 0.878530 -0.02563972 9.5194e-01 1.9689e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9971e-01 1.9018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0322825 3.8753e-01 insignificant 1.0000e+00 insignificant 0.893564 0.877480 0.01422803 7 0.834501 0.900308 -0.06580740 3.9022e-01 5.8868e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.3322e-01 0.61659956 insignificant 1.0000e+00 1.00000 insignificant -0.0176655 0.2468492 insignificant 1.00000 insignificant 0.906751 0.912515 -0.0047208 7 0.839301 0.878530 -0.0392285 8.6423e-01 1.8946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8874e-01 9.3597e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0267543 5.2315e-01 insignificant 1.0000e+00 insignificant 0.907055 0.877480 0.03043141 7 0.860880 0.900308 -0.0394281 1.1551e-01 5.0721e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.0817e-01 0.5860513 insignificant 1.00000000 1 insignificant -0.01213725 0.6392799 insignificant 1.00000 insignificant 0.912409 0.877480 0.0338209 7 0.863346 0.900308 -0.0369627 1.3851e-01 8.7939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0146e-01 9.8429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0146170 6.6890e-01 insignificant 1.0000000 insignificant chr17 40337047 40338047 142373 CCDC103,FAM187A ENSG00000167131,ENSG00000214447 0.906366 229 7 0.8344057 292 8 0.866558 227 8 0.922446 200 7 0.848268 99 6 0.881750 528 8 0.845881 109 8 0.914154 220 8 0.887105 127 7 0.925849 136 8 0.82412 479 8 0.852404 57 4 0.955580 235 8 0.962963 76 4 0.940619 144 8 0.713381 62 5 0.725000 36 3 0.963483 286 7 0.811010 617 8 0.796177 354 8 0.831031 185 8 0.964052 99 5 0.900990 178 8 0.968243 116 5 0.853873 79 4 0.944236 356 8 0.840416 172 7 0.679325 65 5 0.867113 257 8 0.936652 346 8 0.859960 462 8 0.924232 322 8 0.9016413 227 8 0.973928 159 8 0.9833333 93 5 0.833929 48 4 0.838613 124 8 0.9174313 342 8 0.8923448 162 6 0.910691 241 8 0.907246 161 7 0.897748 130 6 0.879886 183 7 0.895581 0.852936 0.864989 0.936061 0.978715 0.922168 0.887404 0.893230 0.920128 0.949818 0.913789 0.899038 0.969160 0.928505 0.957415 0.704372 0.907486 0.975419 0.916141 0.893072 0.956230 0.941685 0.928791 0.944601 0.919708 0.947173 0.851506 0.878477 0.865920 0.939084 0.897495 0.926637 0.9165827 0.977166 0.96412108 0.844909 0.972075 0.870661 0.8541699 0.948154 0.892804 0.909074 0.870507 3 0.892976 0.908608 -0.0186209 8 0.856300 0.847880 0.00841990 0.3753775 1.8769e-01 insignificant 1 1.000000 insignificant 0.543051 0.2877007 insignificant 1 1.00000 insignificant -0.01196777 0.674489 insignificant 1 insignificant 0.892976 0.916415 -0.0238221 8 0.856300 0.884206 -0.02790580 9.7443e-01 1.4342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 1.0201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0392700 2.3188e-01 insignificant 1.0000e+00 insignificant 0.892881 0.880274 0.01116398 7 0.840334 0.911385 -0.07105173 5.2474e-01 2.4817e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.5831e-01 0.14086873 insignificant 1.0000e+00 1.00000 insignificant -0.0287072 0.1054891 insignificant 1.00000 insignificant 0.908608 0.916415 -0.0054856 8 0.847880 0.884206 -0.0363257 9.0342e-01 1.8331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9412e-01 8.4552e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0273022 4.4772e-01 insignificant 1.0000e+00 insignificant 0.908884 0.880274 0.02794042 7 0.868015 0.911385 -0.0433701 1.9311e-01 3.0811e-02 inconclusive 1.0000e+00 1.0000000 insignificant 4.3632e-01 0.2149405 insignificant 1.00000000 1 insignificant -0.01673945 0.4930469 insignificant 1.00000 insignificant 0.916331 0.880274 0.0308495 7 0.871340 0.911385 -0.0400453 2.2499e-01 3.3860e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0429e-01 8.7149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0105628 7.0727e-01 insignificant 1.0000000 insignificant chr17 40337205 40338205 142374 CCDC103,FAM187A ENSG00000167131,ENSG00000214447 0.906366 229 7 0.8344057 292 8 0.866558 227 8 0.922446 200 7 0.848268 99 6 0.881750 528 8 0.845881 109 8 0.914154 220 8 0.887105 127 7 0.925849 136 8 0.82412 479 8 0.852404 57 4 0.955580 235 8 0.962963 76 4 0.940619 144 8 0.713381 62 5 0.725000 36 3 0.963483 286 7 0.811010 617 8 0.796177 354 8 0.831031 185 8 0.964052 99 5 0.900990 178 8 0.968243 116 5 0.853873 79 4 0.944236 356 8 0.840416 172 7 0.679325 65 5 0.867113 257 8 0.936652 346 8 0.859960 462 8 0.924232 322 8 0.9016413 227 8 0.973928 159 8 0.9833333 93 5 0.833929 48 4 0.838613 124 8 0.9174313 342 8 0.8923448 162 6 0.910691 241 8 0.907246 161 7 0.897748 130 6 0.879886 183 7 0.895581 0.852936 0.864989 0.936061 0.978715 0.922168 0.887404 0.893230 0.920128 0.949818 0.913789 0.899038 0.969160 0.928505 0.957415 0.704372 0.907486 0.975419 0.916141 0.893072 0.956230 0.941685 0.928791 0.944601 0.919708 0.947173 0.851506 0.878477 0.865920 0.939084 0.897495 0.926637 0.9165827 0.977166 0.96412108 0.844909 0.972075 0.870661 0.8541699 0.948154 0.892804 0.909074 0.870507 3 0.892976 0.908608 -0.0186209 8 0.856300 0.847880 0.00841990 0.3753775 1.8769e-01 insignificant 1 1.000000 insignificant 0.543051 0.2877007 insignificant 1 1.00000 insignificant -0.01196777 0.674489 insignificant 1 insignificant 0.892976 0.916415 -0.0238221 8 0.856300 0.884206 -0.02790580 9.7443e-01 1.4342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 1.0201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0392700 2.3188e-01 insignificant 1.0000e+00 insignificant 0.892881 0.880274 0.01116398 7 0.840334 0.911385 -0.07105173 5.2474e-01 2.4817e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.5831e-01 0.14086873 insignificant 1.0000e+00 1.00000 insignificant -0.0287072 0.1054891 insignificant 1.00000 insignificant 0.908608 0.916415 -0.0054856 8 0.847880 0.884206 -0.0363257 9.0342e-01 1.8331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9412e-01 8.4552e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0273022 4.4772e-01 insignificant 1.0000e+00 insignificant 0.908884 0.880274 0.02794042 7 0.868015 0.911385 -0.0433701 1.9311e-01 3.0811e-02 inconclusive 1.0000e+00 1.0000000 insignificant 4.3632e-01 0.2149405 insignificant 1.00000000 1 insignificant -0.01673945 0.4930469 insignificant 1.00000 insignificant 0.916331 0.880274 0.0308495 7 0.871340 0.911385 -0.0400453 2.2499e-01 3.3860e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0429e-01 8.7149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0105628 7.0727e-01 insignificant 1.0000000 insignificant chr17 40408755 40409755 142383 ENSG00000131094 0.625000 32 2 0.7695829 106 5 0.912088 38 4 0.711429 70 4 0.693651 59 5 0.922409 129 5 0.686507 87 5 0.866667 62 5 0.727171 54 4 0.887500 19 3 0.69259 138 5 0.900000 12 1 0.960000 15 1 0.833333 15 1 0.808333 25 2 0.833333 10 0 NA 0 0 0.637179 24 1 0.939560 73 5 0.743939 75 4 0.928571 35 3 0.400000 6 0 0.855152 44 4 0.920000 39 4 0.826249 111 5 0.782712 88 5 0.677083 50 4 0.661905 30 2 0.686254 50 4 0.859482 125 5 0.616860 181 5 0.752614 71 5 0.4690476 78 4 0.334807 67 5 0.5107143 109 4 0.371739 79 4 0.436572 55 4 0.5983004 125 5 0.5219048 81 5 0.772414 55 3 0.825558 56 4 0.666667 16 2 0.841569 76 5 0.705882 0.801055 0.880629 0.717740 0.860504 0.900950 0.797554 0.789216 0.741748 0.911765 0.815533 0.931373 0.917647 1.000000 0.731209 0.813975 NA 0.786450 0.890972 0.641117 0.885154 0.392157 0.838384 0.878431 0.838235 0.823387 0.721814 0.786928 0.859393 0.837099 0.846042 0.879662 0.5032680 0.395425 0.42212885 0.514904 0.720540 0.621565 0.6018674 0.797791 0.762614 0.651525 0.840754 0 0.821668 0.834741 -0.0147219 4 0.740569 0.710253 0.03031514 0.6597617 2.7561e-01 lowCoverage 1 1.000000 lowCoverage 0.616391 0.6805576 lowCoverage 1 1.00000 lowCoverage 0.05014260 0.327648 lowCoverage 1 lowCoverage 0.821668 0.552734 0.2980456 4 0.740569 0.397568 0.34300095 9.9732e-09 1.0000e+00 lowCoverage 1.7195e-07 1.0000e+00 lowCoverage 3.3218e-06 1.0000e+00 lowCoverage 8.5174e-05 1.0000e+00 lowCoverage 0.3438526 3.0903e-05 lowCoverage 1.0301e-03 lowCoverage 0.821497 0.792254 0.05164004 4 0.697330 0.746212 -0.04888253 3.6537e-03 9.7524e-01 lowCoverage 9.1343e-02 1.0000000 lowCoverage 6.8953e-02 0.66405000 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0717604 0.3111849 lowCoverage 1.00000 lowCoverage 0.833735 0.551657 0.3002428 5 0.621472 0.347872 0.2736001 9.2350e-09 1.0000e+00 hypermethylated 1.8470e-07 1.0000e+00 hypermethylated 3.8470e-05 1.0000e+00 hypermethylated 9.6174e-04 1.0000e+00 hypermethylated 0.2937100 1.5408e-04 lowCoverage 4.1644e-03 lowCoverage 0.837576 0.792254 0.05668620 4 0.786962 0.746212 0.0407498 2.2793e-03 8.1061e-01 lowCoverage 6.7039e-02 1.0000000 lowCoverage 7.6990e-02 0.8817141 lowCoverage 1.00000000 1 lowCoverage 0.02161777 0.7758382 lowCoverage 1.00000 lowCoverage 0.554902 0.792254 -0.2583807 4 0.463829 0.746212 -0.2823836 9.7678e-01 3.0725e-02 lowCoverage 1.0000e+00 3.3397e-01 lowCoverage 9.9882e-01 6.6349e-03 lowCoverage 1.0000e+00 1.0987e-01 lowCoverage -0.2720923 6.2457e-03 lowCoverage 0.1178443 lowCoverage chr17 40605437 40606437 142397 HEXIM2 ENSG00000168517 0.577120 192 5 0.3291971 155 6 0.394079 91 5 0.574376 225 5 0.377344 85 5 0.529801 378 5 0.452242 75 5 0.487486 120 5 0.340758 117 5 0.424772 96 5 0.43679 112 6 0.411111 23 1 0.382529 159 5 0.425563 59 3 0.313791 111 5 0.400000 12 0 0.532468 25 3 0.508378 419 5 0.383289 259 5 0.419993 283 5 0.400866 67 5 0.520328 81 3 0.523408 91 5 0.441793 54 6 0.452350 130 6 0.321450 165 6 0.309982 125 6 0.415289 55 4 0.424398 102 5 0.267274 206 6 0.373624 263 6 0.530011 207 5 0.0314815 223 6 0.000000 140 6 0.0000000 45 1 0.100361 104 5 0.076823 104 6 0.2011427 217 6 0.4257283 162 5 0.389743 122 6 0.417426 143 5 0.585633 206 5 0.299113 146 5 0.616764 0.377620 0.605299 0.541981 0.517038 0.594607 0.511786 0.541783 0.480142 0.480891 0.571137 0.546524 0.434060 0.520645 0.347385 0.533742 0.451119 0.564929 0.548251 0.345924 0.437929 0.555312 0.682640 0.582543 0.493895 0.413314 0.346495 0.452627 0.607362 0.344770 0.477428 0.497043 0.0437628 0.000000 NA 0.140758 0.052598 0.269086 0.4674525 0.522385 0.470173 0.554390 0.416443 3 0.399533 0.379043 0.0478957 5 0.424759 0.372403 0.05235550 0.0254695 9.9877e-01 weaklyHypermeth 1 1.000000 insignificant 0.195400 0.4730978 insignificant 1 1.00000 insignificant 0.01998974 0.516811 lowCoverage 1 lowCoverage 0.399533 0.070828 0.3435875 5 0.424759 0.082386 0.34237226 6.5160e-21 1.0000e+00 hypermethylated 2.4133e-19 1.0000e+00 hypermethylated 3.3753e-10 1.0000e+00 hypermethylated 1.9855e-08 1.0000e+00 hypermethylated 0.3667529 5.2987e-06 lowCoverage 2.5232e-04 lowCoverage 0.399533 0.341463 0.02910913 5 0.424759 0.396020 0.02873861 1.8454e-01 3.6817e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9087e-01 0.27467501 insignificant 1.0000e+00 1.00000 insignificant 0.0115256 0.8247009 lowCoverage 1.00000 lowCoverage 0.379043 0.070828 0.2980176 6 0.372403 0.082386 0.2900168 1.2802e-14 1.0000e+00 hypermethylated 4.2674e-13 1.0000e+00 hypermethylated 3.3557e-10 1.0000e+00 hypermethylated 2.2371e-08 1.0000e+00 hypermethylated 0.3467631 2.5606e-06 hypermethylated 1.2803e-04 hypermethylated 0.379043 0.341463 -0.01487569 5 0.372403 0.396020 -0.0236169 6.8460e-01 1.5172e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.6754e-01 0.4229695 insignificant 1.00000000 1 insignificant -0.00846416 0.8770831 insignificant 1.00000 insignificant 0.070828 0.341463 -0.3116381 5 0.082386 0.396020 -0.3136336 1.0000e+00 1.9017e-13 hypomethylated 1.0000e+00 1.2161e-11 hypomethylated 1.0000e+00 1.3855e-07 hypomethylated 1.0000e+00 1.1546e-05 hypomethylated -0.3552273 3.2812e-04 hypomethylated 0.0197529 hypomethylated chr17 40788670 40789670 142401 ENSG00000199953 0.877360 202 5 0.7283222 155 5 0.763411 116 5 0.788245 118 5 0.715229 77 5 0.772214 205 5 0.751072 110 5 0.839402 141 5 0.766471 98 5 0.709400 117 5 0.76969 206 5 0.581190 59 5 0.758905 158 5 NA 0 0 0.798527 130 5 0.708899 101 5 0.725000 90 5 0.807062 201 5 0.668928 142 5 0.796982 214 5 0.744258 55 4 0.840132 85 5 0.804011 162 5 0.752137 72 5 0.865359 69 5 0.773692 162 5 0.822222 61 5 0.796410 55 5 0.738982 114 5 0.818981 186 5 0.815237 225 5 0.796767 336 5 0.6857372 126 5 0.743290 121 5 0.5077992 79 2 0.853256 55 5 0.747059 70 5 0.8093240 133 5 0.8362629 207 5 0.829100 270 5 0.782737 224 5 0.834031 325 5 0.818934 251 5 0.832404 0.694187 0.717183 0.749919 0.678882 0.748437 0.689157 0.828027 0.700675 0.649440 0.716093 0.536350 0.708006 NA 0.739629 0.631606 0.707651 0.732181 0.699272 0.771443 0.700519 0.778072 0.757234 0.714725 0.825925 0.718067 0.796164 0.792696 0.695995 0.759096 0.775210 0.756801 0.6492238 0.646697 0.60489977 0.855109 0.711081 0.733407 0.7927598 0.788666 0.733643 0.796372 0.766316 5 0.741667 0.777497 -0.0290457 5 0.766111 0.796902 -0.03079062 0.9883151 5.6309e-02 insignificant 1 1.000000 insignificant 0.988831 0.0053629 weaklyHypometh 1 0.83856 insignificant -0.04333274 0.027208 lowCoverage 1 lowCoverage 0.741667 0.724315 0.0011455 5 0.766111 0.765872 0.00023969 2.6286e-01 5.1575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4892e-01 2.1360e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0296054 5.8682e-01 lowCoverage 1.0000e+00 lowCoverage 0.741667 0.791699 -0.05295386 5 0.766111 0.821007 -0.05489540 9.9907e-01 2.0221e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9999e-01 0.00137571 weaklyHypometh 1.0000e+00 0.34393 insignificant -0.0661967 0.0013607 lowCoverage 0.15717 lowCoverage 0.777497 0.724315 0.0285918 5 0.796902 0.765872 0.0310303 9.0510e-02 8.7261e-01 insignificant 7.1268e-01 1.0000e+00 insignificant 1.5092e-01 9.2705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0729381 2.0384e-01 lowCoverage 1.0000e+00 lowCoverage 0.777497 0.791699 -0.02414431 5 0.796902 0.821007 -0.0241048 9.5141e-01 1.1028e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7717e-01 0.2040994 insignificant 1.00000000 1 insignificant -0.02286400 0.1498492 lowCoverage 1.00000 lowCoverage 0.724315 0.791699 -0.0529375 5 0.765872 0.821007 -0.0551351 9.3265e-01 1.0356e-01 insignificant 1.0000e+00 9.5887e-01 insignificant 8.6259e-01 5.0852e-02 insignificant 1.0000e+00 5.8451e-01 insignificant -0.0958021 1.1112e-01 lowCoverage 1.0000000 lowCoverage chr17 41852185 41853185 142433 ARL17B ENSG00000185829 0.852015 80 6 0.7004067 129 6 0.543182 39 3 0.801768 86 6 0.788095 36 5 0.866471 247 6 0.650000 20 2 0.869444 74 6 0.773106 47 6 0.759921 47 6 0.85325 133 6 0.732540 34 5 0.940351 80 6 0.919872 42 2 0.785880 62 6 0.550000 46 4 0.825000 34 4 0.736783 70 6 0.722838 105 6 0.824977 203 6 0.746521 59 6 0.683514 53 6 0.775198 74 6 0.863203 42 4 0.810714 48 4 0.784259 69 6 0.667130 61 6 0.724206 40 5 0.785170 104 6 0.843805 98 6 0.737722 124 6 0.860087 219 6 0.7713755 98 6 0.745238 56 6 0.6486111 77 6 0.559524 29 3 0.703297 66 6 0.7346038 134 6 0.8020833 86 6 0.854980 84 6 0.888278 45 4 0.779672 53 6 0.593787 106 6 0.787649 0.648811 0.540813 0.787527 0.799296 0.835940 0.690845 0.857394 0.724285 0.861391 0.842450 0.723340 0.945515 0.924160 0.792903 0.565728 0.819993 0.772850 0.741241 0.828180 0.770201 0.686277 0.796102 0.843950 0.765845 0.757942 0.666080 0.729041 0.757892 0.846968 0.741134 0.788778 0.7049107 0.700704 0.86345853 0.577968 0.636679 0.767039 0.7904301 0.862224 0.876954 0.800416 0.789988 1 0.791822 0.773966 0.0164720 6 0.829619 0.813450 0.01616917 0.7609036 9.5539e-01 insignificant 1 1.000000 insignificant 0.666177 0.9864910 insignificant 1 1.00000 insignificant 0.00133381 0.965126 insignificant 1 insignificant 0.791822 0.730435 0.0593714 6 0.829619 0.619035 0.21058374 4.1291e-01 9.9778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6094e-01 9.9902e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0810198 6.6056e-02 insignificant 6.9533e-01 insignificant 0.792523 0.810160 -0.01941048 6 0.840595 0.603894 0.23670179 9.8671e-01 6.0421e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5242e-01 0.61561563 insignificant 1.0000e+00 1.00000 insignificant -0.0089653 0.8791874 insignificant 1.00000 insignificant 0.773966 0.730435 0.0448903 6 0.813450 0.619035 0.1944146 2.9617e-01 9.9748e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7020e-01 9.8704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0796860 6.0888e-02 insignificant 6.4092e-01 insignificant 0.773700 0.810160 -0.03368449 6 0.826336 0.603894 0.2224427 9.9857e-01 3.2330e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5280e-01 0.1196794 insignificant 1.00000000 1 insignificant -0.01029909 0.8574028 insignificant 1.00000 insignificant 0.731278 0.810160 -0.0775296 6 0.673794 0.603894 0.0699007 9.9980e-01 6.8475e-02 insignificant 1.0000e+00 6.9167e-01 insignificant 9.9947e-01 8.8183e-02 insignificant 1.0000e+00 9.4820e-01 insignificant -0.0899851 1.8013e-01 insignificant 1.0000000 insignificant chr17 42316138 42317138 142491 WNT9B ENSG00000158955 0.895826 311 8 0.8244760 228 8 0.779050 179 8 0.861357 405 8 0.748775 89 8 0.884664 590 8 0.729456 136 7 0.851350 235 8 0.843708 203 8 0.857862 237 8 0.88158 245 8 0.829044 85 7 0.901674 302 8 0.904663 93 6 0.828211 186 8 0.558012 97 8 0.882684 78 7 0.778196 471 8 0.881192 244 8 0.831949 437 8 0.709198 101 8 0.725834 192 8 0.819359 152 8 0.876768 126 8 0.899610 160 8 0.832036 213 8 0.844228 199 8 0.726691 105 8 0.831993 158 8 0.896458 260 8 0.875588 330 8 0.827776 381 8 0.2674169 261 8 0.454560 164 8 0.4263949 406 6 0.273022 103 8 0.503944 163 8 0.4283571 248 8 0.6511181 241 8 0.678402 320 8 0.785054 302 8 0.800981 270 8 0.830649 371 8 0.896120 0.823585 0.779921 0.860359 0.741522 0.884021 0.727941 0.851327 0.845157 0.856667 0.882142 0.822140 0.900676 0.901155 0.824632 0.551658 0.881094 0.778976 0.879578 0.830597 0.734745 0.726630 0.819839 0.875599 0.898614 0.832852 0.845013 0.725801 0.836203 0.896909 0.875940 0.825070 0.2710881 0.446787 0.42642420 0.278830 0.505172 0.434182 0.6539871 0.686646 0.783159 0.803390 0.836576 8 0.843537 0.836632 0.0059221 8 0.843412 0.835288 0.00812392 0.3523581 8.2064e-01 insignificant 1 1.000000 insignificant 0.062765 0.9182976 insignificant 1 1.00000 insignificant 0.00555810 0.835229 insignificant 1 insignificant 0.843537 0.449814 0.3969063 8 0.843412 0.420068 0.42334384 3.9939e-45 1.0000e+00 hypermethylated 4.9924e-43 1.0000e+00 hypermethylated 1.9059e-16 1.0000e+00 hypermethylated 2.1177e-14 1.0000e+00 hypermethylated 0.4354039 2.0388e-05 hypermethylated 7.5510e-04 hypermethylated 0.843537 0.718750 0.09996059 8 0.843412 0.750763 0.09264815 5.8692e-09 9.8687e-01 weaklyHypermeth 4.8910e-07 1.0000000 weaklyHypermeth 1.2284e-04 0.96303774 weaklyHypermeth 6.8242e-03 1.00000 weaklyHypermeth 0.0784455 0.0946622 insignificant 1.00000 insignificant 0.836632 0.449814 0.3997567 8 0.835288 0.420068 0.4152199 9.5947e-34 1.0000e+00 hypermethylated 8.7225e-32 1.0000e+00 hypermethylated 6.0947e-18 1.0000e+00 hypermethylated 1.5237e-15 1.0000e+00 hypermethylated 0.4298458 1.9298e-05 hypermethylated 7.7193e-04 hypermethylated 0.836632 0.718750 0.08645281 8 0.835288 0.750763 0.0845242 1.4191e-07 9.4914e-01 weaklyHypermeth 1.4191e-05 1.0000000 weaklyHypermeth 1.6434e-04 0.8453457 weaklyHypermeth 0.01095627 1 weaklyHypermeth 0.07288745 0.1176293 insignificant 1.00000 insignificant 0.449814 0.718750 -0.3045365 8 0.420068 0.750763 -0.3306957 9.9999e-01 2.0674e-13 hypomethylated 1.0000e+00 1.2161e-11 hypomethylated 1.0000e+00 4.3561e-09 hypomethylated 1.0000e+00 4.8401e-07 hypomethylated -0.3569583 9.3968e-05 hypomethylated 0.0093968 hypomethylated chr17 42326337 42327337 142493 WNT9B ENSG00000158955 0.707978 135 7 0.3863046 93 7 0.631749 130 10 0.538292 97 7 0.333333 36 2 0.681403 315 9 0.559458 85 11 0.722990 88 8 0.451046 100 10 0.753896 143 10 0.69066 143 11 0.627222 71 5 0.461528 238 11 0.641275 101 6 0.679281 108 9 0.492424 80 6 0.427288 76 5 0.327371 174 7 0.441468 182 11 0.578516 293 10 0.548760 51 3 0.635658 123 6 0.804231 79 7 0.672317 96 5 0.651790 99 7 0.596528 113 11 0.385101 95 7 0.527778 37 3 0.713571 80 7 0.597442 192 11 0.606157 213 10 0.749892 146 8 0.0887161 126 11 0.020920 129 6 0.0083333 79 4 0.133393 116 7 0.203343 117 10 0.1417027 190 10 0.5247297 141 7 0.537113 189 7 0.698609 123 7 0.327716 193 7 0.615602 154 7 0.688504 0.443124 0.729155 0.751599 0.357988 0.713169 0.585263 0.711867 0.528301 0.593776 0.757059 0.608293 0.411034 0.640008 0.690035 0.281206 0.364877 0.403716 0.343857 0.442606 0.557277 0.579534 0.709087 0.717445 0.729494 0.641882 0.467702 0.575863 0.687315 0.625581 0.675882 0.810930 0.1547521 0.025144 0.07932445 0.142341 0.179356 0.123556 0.6989350 0.576323 0.713735 0.389000 0.503754 2 0.562803 0.658850 -0.0936708 9 0.550910 0.636885 -0.08597488 0.9998831 5.4056e-04 weaklyHypometh 1 0.077223 weaklyHypometh 0.997408 0.0069654 weaklyHypometh 1 0.83856 insignificant -0.06742778 0.134673 insignificant 1 insignificant 0.562919 0.103038 0.4638622 10 0.559814 0.094717 0.46509759 3.5979e-35 1.0000e+00 hypermethylated 2.1164e-33 1.0000e+00 hypermethylated 2.6162e-17 1.0000e+00 hypermethylated 3.2703e-15 1.0000e+00 hypermethylated 0.4572730 1.6684e-08 hypermethylated 9.2686e-07 hypermethylated 0.563060 0.523750 0.05433562 7 0.559243 0.566728 -0.00748472 1.3467e-03 2.2845e-01 weaklyHypermeth 3.6398e-02 1.0000000 weaklyHypermeth 3.4918e-02 0.63069346 weaklyHypermeth 8.5278e-01 1.00000 insignificant 0.0159204 0.8242075 insignificant 1.00000 insignificant 0.658850 0.103175 0.5558509 9 0.636885 0.102610 0.5342750 1.1169e-38 1.0000e+00 hypermethylated 1.5955e-36 1.0000e+00 hypermethylated 6.9072e-15 1.0000e+00 hypermethylated 7.6746e-13 1.0000e+00 hypermethylated 0.5247007 1.0010e-08 hypermethylated 9.1002e-07 hypermethylated 0.659091 0.523154 0.14636762 7 0.649329 0.527340 0.1219893 1.7674e-06 9.6467e-01 weaklyHypermeth 1.2624e-04 1.0000000 weaklyHypermeth 9.1509e-04 0.9309125 weaklyHypermeth 0.04816244 1 weaklyHypermeth 0.08334821 0.2734523 insignificant 1.00000 insignificant 0.103448 0.523154 -0.4232944 7 0.111938 0.527340 -0.4154017 1.0000e+00 7.5611e-15 hypomethylated 1.0000e+00 5.8162e-13 hypomethylated 1.0000e+00 1.3558e-07 hypomethylated 1.0000e+00 1.1546e-05 hypomethylated -0.4413525 7.1389e-04 hypomethylated 0.0285549 hypomethylated chr17 43153368 43154368 142524 TBKBP1 ENSG00000198933 0.221196 200 9 0.3070059 508 10 0.238249 426 10 0.168153 236 11 0.423580 226 9 0.261570 539 13 0.279231 322 12 0.180096 207 8 0.233580 218 13 0.228514 194 11 0.23307 380 12 0.251648 137 6 0.166083 208 10 0.258951 136 8 0.196863 235 12 0.241931 116 7 0.142284 49 4 0.137681 148 5 0.315257 240 5 0.327221 459 15 0.263006 137 10 0.074047 118 5 0.134413 239 14 0.304892 245 12 0.294156 79 5 0.253975 436 10 0.201023 345 13 0.194386 171 9 0.258960 169 5 0.287944 581 13 0.230422 716 10 0.394627 340 12 0.0862667 415 14 0.119979 162 6 0.1917849 233 7 0.124286 62 6 0.086212 337 12 0.1039849 415 10 0.3325474 293 7 0.212825 262 9 0.253253 182 6 0.153036 155 5 0.231613 227 7 0.429438 0.389357 0.400320 0.386036 0.472280 0.430235 0.415339 0.380181 0.410182 0.428413 0.422637 0.391871 0.283927 0.460783 0.412444 0.321096 0.389104 0.423978 0.372016 0.487595 0.421293 0.036959 0.391176 0.378217 0.552652 0.437330 0.350483 0.351006 0.411258 0.368587 0.346622 0.503258 0.2777636 0.341595 0.40686695 0.370645 0.227914 0.135826 0.4062753 0.421722 0.392328 0.411160 0.422973 4 0.366127 0.337528 0.0205227 9 0.256550 0.280817 -0.02426633 0.3035015 9.3491e-01 insignificant 1 1.000000 insignificant 0.587891 0.6743890 insignificant 1 1.00000 insignificant -0.00037914 0.989570 insignificant 1 insignificant 0.366287 0.249538 0.1690093 9 0.229500 0.083466 0.14603406 5.7885e-15 1.0000e+00 weaklyHypermeth 1.6079e-13 1.0000e+00 weaklyHypermeth 1.5483e-08 9.9978e-01 weaklyHypermeth 7.0376e-07 1.0000e+00 weaklyHypermeth 0.1218563 6.1360e-05 weaklyHypermeth 1.7969e-03 weaklyHypermeth 0.366042 0.446828 0.01739603 6 0.219471 0.220045 -0.00057404 2.7119e-02 3.4761e-02 weaklyHypermeth 5.4238e-01 1.0000000 insignificant 1.1008e-01 0.37960340 insignificant 1.0000e+00 1.00000 insignificant 0.0039536 0.9083812 insignificant 1.00000 insignificant 0.336975 0.249538 0.1537658 12 0.242574 0.083466 0.1591078 2.1962e-13 1.0000e+00 weaklyHypermeth 6.8630e-12 1.0000e+00 weaklyHypermeth 1.2529e-06 1.0000e+00 weaklyHypermeth 4.0417e-05 1.0000e+00 weaklyHypermeth 0.1222354 6.4908e-04 weaklyHypermeth 1.4752e-02 weaklyHypermeth 0.336792 0.446828 0.00412868 6 0.227431 0.220045 0.0073864 8.5358e-02 1.3740e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.4225e-01 0.3881253 insignificant 1.00000000 1 insignificant 0.00433279 0.9112656 insignificant 1.00000 insignificant 0.249846 0.446732 -0.1549062 6 0.093900 0.202548 -0.1086482 9.9996e-01 1.3245e-07 weaklyHypometh 1.0000e+00 3.7844e-06 weaklyHypometh 9.9944e-01 5.0240e-04 weaklyHypometh 1.0000e+00 1.7324e-02 weaklyHypometh -0.1179026 1.1236e-02 weaklyHypometh 0.1914221 insignificant chr17 43293062 43294062 142535 SP6 ENSG00000189120 0.941002 155 6 0.7777583 76 4 0.884848 63 6 0.905976 177 6 0.916667 15 1 0.875476 352 6 0.715556 29 5 0.809273 79 6 0.905041 46 5 0.842172 37 3 0.88075 110 6 0.586667 21 3 0.893298 111 6 0.877778 22 3 0.857053 48 5 0.066667 11 1 0.746429 34 4 0.798769 207 6 0.909259 57 5 0.890666 222 6 0.883333 26 3 0.812169 115 6 0.810300 73 5 0.796104 77 4 0.938301 73 5 0.843609 95 6 0.789394 31 3 0.833333 14 0 0.734051 58 6 0.927083 103 6 0.895557 155 6 0.914205 218 6 0.8148148 45 4 0.810588 48 5 NA 0 0 0.769412 47 3 0.878968 44 5 0.8999324 95 6 0.7844758 93 5 0.896442 127 5 0.854353 168 6 0.907356 118 5 0.900100 201 5 0.907081 0.826881 0.836204 0.908229 1.000000 0.854613 0.703125 0.784398 0.886063 0.742661 0.879293 0.585417 0.882281 0.882888 0.810767 0.093750 0.793806 0.776867 0.880208 0.868515 0.875000 0.744234 0.838736 0.845841 0.936448 0.817003 0.646307 0.765625 0.686279 0.927734 0.883697 0.897977 0.7890625 0.747702 NA 0.662132 0.878720 0.845842 0.6941154 0.861230 0.815503 0.884914 0.835162 0 0.855769 0.859345 -0.0091099 6 0.862189 0.872748 -0.01055905 0.8930460 3.5511e-01 insignificant 1 1.000000 insignificant 0.867244 0.3519562 insignificant 1 1.00000 insignificant -0.04406493 0.356557 lowCoverage 1 lowCoverage 0.855769 0.795699 0.0565807 5 0.862189 0.855482 0.00670697 1.3212e-02 1.4861e-01 weaklyHypermeth 1.2347e-01 1.0000e+00 insignificant 3.8204e-01 5.4552e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0306880 5.4050e-01 lowCoverage 1.0000e+00 lowCoverage 0.855769 0.841584 0.02328124 5 0.862189 0.865833 -0.00364405 3.9164e-01 1.0441e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.2048e-01 0.19927485 insignificant 1.0000e+00 1.00000 insignificant -0.0644904 0.2005082 lowCoverage 1.00000 lowCoverage 0.859345 0.795699 0.0620520 5 0.872748 0.855482 0.0172660 1.9673e-01 1.8142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9009e-01 7.7680e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0133769 6.6776e-01 lowCoverage 1.0000e+00 lowCoverage 0.859345 0.841584 0.02896086 5 0.872748 0.865833 0.0069150 5.9067e-01 2.6909e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.8685e-01 0.4188313 insignificant 1.00000000 1 insignificant -0.02042551 0.5039153 lowCoverage 1.00000 lowCoverage 0.795699 0.841584 -0.0349161 5 0.855482 0.865833 -0.0103510 7.4721e-01 3.8526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3250e-01 7.7940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0338024 3.3803e-01 lowCoverage 1.0000000 lowCoverage chr17 43400054 43401054 142545 PRR15L ENSG00000167183 0.790308 162 5 0.6718821 121 5 0.624977 180 6 0.685611 134 5 0.640276 75 5 0.782637 256 6 0.629642 153 6 0.739522 147 6 0.756722 113 6 0.696674 125 6 0.69811 208 6 0.685090 76 6 0.554114 111 6 0.839864 57 5 0.700605 130 6 0.473257 63 5 0.735958 334 5 0.760742 135 5 0.629798 167 6 0.819297 228 5 0.648485 68 6 0.706475 83 5 0.725132 114 6 0.684804 100 5 0.788169 83 5 0.640669 253 6 0.596104 73 5 0.635808 80 6 0.682184 115 6 0.548984 237 6 0.578855 189 6 0.781428 237 6 0.5541875 279 6 0.575549 103 6 0.5050454 113 6 0.721088 36 5 0.552788 152 6 0.7776798 147 6 0.6848610 163 5 0.713425 146 5 0.737568 99 5 0.737037 85 5 0.726509 153 6 0.752471 0.723834 0.499192 0.761891 0.778251 0.756234 0.546992 0.635709 0.728119 0.669938 0.633554 0.677313 0.566942 0.801328 0.644863 0.550066 0.837109 0.760591 0.554639 0.789083 0.604942 0.882720 0.643258 0.614313 0.786223 0.564421 0.713648 0.614546 0.607119 0.496143 0.611302 0.740488 0.5672681 0.507843 0.49326609 0.872319 0.587149 0.687532 0.6781681 0.841418 0.732969 0.869254 0.748386 5 0.713950 0.646446 0.0720258 6 0.714036 0.642968 0.07106799 0.0246226 8.6681e-01 weaklyHypermeth 1 1.000000 insignificant 0.320456 0.4440723 insignificant 1 1.00000 insignificant 0.02766297 0.356069 insignificant 1 insignificant 0.713950 0.584337 0.1220418 6 0.714036 0.576212 0.13782414 4.0295e-04 9.9247e-01 weaklyHypermeth 4.9141e-03 1.0000e+00 weaklyHypermeth 2.4936e-02 9.9061e-01 weaklyHypermeth 2.8018e-01 1.0000e+00 insignificant 0.0813647 1.3711e-01 insignificant 1.0000e+00 insignificant 0.713950 0.772446 -0.06445455 5 0.714036 0.713809 0.00022703 2.6910e-01 2.9574e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.1079e-01 0.13264688 insignificant 1.0000e+00 1.00000 insignificant -0.0241255 0.2889074 insignificant 1.00000 insignificant 0.646446 0.584337 0.0365500 6 0.642968 0.576212 0.0667562 3.4463e-02 9.4527e-01 weaklyHypermeth 3.1910e-01 1.0000e+00 insignificant 7.6931e-02 9.5832e-01 insignificant 7.6931e-01 1.0000e+00 insignificant 0.0537017 3.1019e-01 insignificant 1.0000e+00 insignificant 0.646446 0.772446 -0.15136886 5 0.642968 0.713809 -0.0708410 3.4409e-01 2.4790e-03 weaklyHypometh 1.0000e+00 0.8263227 insignificant 2.2727e-01 0.0961054 insignificant 1.00000000 1 insignificant -0.05178847 0.0466143 weaklyHypometh 1.00000 insignificant 0.584337 0.772446 -0.2034519 5 0.576212 0.713809 -0.1375971 9.0987e-01 4.7998e-05 hypomethylated 1.0000e+00 9.9996e-04 hypomethylated 7.7992e-01 1.6775e-02 weaklyHypometh 1.0000e+00 2.3964e-01 insignificant -0.1054902 6.3148e-02 insignificant 0.7342743 insignificant chr17 43423337 43424337 142548 CDK5RAP3 ENSG00000108465 0.226962 271 5 0.1341524 184 6 0.326854 204 7 0.173604 333 5 0.154825 138 7 0.180455 493 7 0.232796 149 7 0.300246 198 7 0.121571 201 7 0.129134 160 7 0.26911 200 7 0.287445 162 7 0.036618 239 7 0.164646 79 3 0.084744 248 7 0.179703 211 7 0.130357 228 7 0.461804 281 5 0.037263 215 5 0.087410 484 7 0.191517 96 7 0.036957 236 7 0.288591 152 7 0.084873 144 5 0.116363 139 5 0.137388 261 7 0.090320 189 7 0.213013 78 6 0.312283 132 5 0.051705 317 7 0.047771 335 7 0.252389 347 7 0.4391937 129 7 0.540708 126 5 0.6666667 5 0 0.412676 82 5 0.654929 149 7 0.2873635 156 7 0.0130614 373 5 0.051721 327 5 0.024389 286 5 0.140069 333 5 0.106503 355 5 0.280680 0.190930 0.370485 0.213870 0.204604 0.267801 0.308537 0.211880 0.188917 0.189915 0.360187 0.326184 0.038236 0.207913 0.112808 0.237274 0.189093 0.262161 0.054265 0.109848 0.274564 0.017111 0.260092 0.123791 0.172489 0.142101 0.128169 0.351470 0.256716 0.063738 0.068154 0.331017 0.3809092 0.504580 0.30932526 0.391478 0.562161 0.127974 0.0130570 0.089011 0.049691 0.143532 0.102883 5 0.202096 0.153751 0.0416534 7 0.209156 0.117279 0.09187746 0.0216935 9.6558e-01 weaklyHypermeth 1 1.000000 insignificant 0.076157 0.9860269 insignificant 1 1.00000 insignificant 0.03405448 0.360485 insignificant 1 insignificant 0.202096 0.414219 -0.2226364 6 0.209156 0.539835 -0.33067846 9.9325e-01 1.5286e-20 hypomethylated 1.0000e+00 3.0572e-18 hypomethylated 9.8989e-01 5.9277e-07 hypomethylated 1.0000e+00 1.1855e-04 hypomethylated -0.3142708 2.2364e-03 weaklyHypometh 4.0661e-02 weaklyHypometh 0.201925 0.077338 0.13374440 5 0.146656 0.073324 0.07333209 1.6713e-04 9.9914e-01 weaklyHypermeth 5.7631e-03 1.0000000 weaklyHypermeth 9.1208e-05 0.99999449 weaklyHypermeth 5.3652e-03 1.00000 weaklyHypermeth 0.1188365 0.0039842 weaklyHypermeth 0.26561 insignificant 0.153751 0.414219 -0.2642908 6 0.117279 0.539835 -0.4225559 9.9996e-01 1.9989e-16 hypomethylated 1.0000e+00 3.9978e-14 hypomethylated 9.9912e-01 2.3025e-06 hypomethylated 1.0000e+00 3.8374e-04 hypomethylated -0.3483252 1.1103e-03 weaklyHypometh 2.1352e-02 weaklyHypometh 0.153878 0.077477 0.08060518 5 0.134033 0.083799 0.0502339 5.6503e-02 9.2844e-01 insignificant 8.8933e-01 1.0000000 insignificant 6.3486e-03 0.9994976 weaklyHypermeth 0.19839479 1 insignificant 0.08478206 0.0395671 weaklyHypermeth 1.00000 insignificant 0.413313 0.077477 0.3197212 5 0.474097 0.083799 0.3902978 3.8540e-10 1.0000e+00 hypermethylated 7.6518e-08 1.0000e+00 hypermethylated 1.3689e-06 1.0000e+00 hypermethylated 4.5629e-04 1.0000e+00 hypermethylated 0.4331073 3.9506e-04 hypermethylated 0.0197529 hypermethylated chr17 43423526 43424526 142549 CDK5RAP3 ENSG00000108465 0.226962 271 5 0.1341524 184 6 0.326854 204 7 0.173604 333 5 0.154825 138 7 0.180455 493 7 0.232796 149 7 0.300246 198 7 0.121571 201 7 0.129134 160 7 0.26911 200 7 0.287445 162 7 0.036618 239 7 0.164646 79 3 0.084744 248 7 0.179703 211 7 0.130357 228 7 0.461804 281 5 0.037263 215 5 0.087410 484 7 0.191517 96 7 0.036957 236 7 0.288591 152 7 0.084873 144 5 0.116363 139 5 0.137388 261 7 0.090320 189 7 0.213013 78 6 0.312283 132 5 0.051705 317 7 0.047771 335 7 0.252389 347 7 0.4391937 129 7 0.540708 126 5 0.6666667 5 0 0.412676 82 5 0.654929 149 7 0.2873635 156 7 0.0130614 373 5 0.051721 327 5 0.024389 286 5 0.140069 333 5 0.106503 355 5 0.280680 0.190930 0.370485 0.213870 0.204604 0.267801 0.308537 0.211880 0.188917 0.189915 0.360187 0.326184 0.038236 0.207913 0.112808 0.237274 0.189093 0.262161 0.054265 0.109848 0.274564 0.017111 0.260092 0.123791 0.172489 0.142101 0.128169 0.351470 0.256716 0.063738 0.068154 0.331017 0.3809092 0.504580 0.30932526 0.391478 0.562161 0.127974 0.0130570 0.089011 0.049691 0.143532 0.102883 5 0.202096 0.153751 0.0416534 7 0.209156 0.117279 0.09187746 0.0216935 9.6558e-01 weaklyHypermeth 1 1.000000 insignificant 0.076157 0.9860269 insignificant 1 1.00000 insignificant 0.03405448 0.360485 insignificant 1 insignificant 0.202096 0.414219 -0.2226364 6 0.209156 0.539835 -0.33067846 9.9325e-01 1.5286e-20 hypomethylated 1.0000e+00 3.0572e-18 hypomethylated 9.8989e-01 5.9277e-07 hypomethylated 1.0000e+00 1.1855e-04 hypomethylated -0.3142708 2.2364e-03 weaklyHypometh 4.0661e-02 weaklyHypometh 0.201925 0.077338 0.13374440 5 0.146656 0.073324 0.07333209 1.6713e-04 9.9914e-01 weaklyHypermeth 5.7631e-03 1.0000000 weaklyHypermeth 9.1208e-05 0.99999449 weaklyHypermeth 5.3652e-03 1.00000 weaklyHypermeth 0.1188365 0.0039842 weaklyHypermeth 0.26561 insignificant 0.153751 0.414219 -0.2642908 6 0.117279 0.539835 -0.4225559 9.9996e-01 1.9989e-16 hypomethylated 1.0000e+00 3.9978e-14 hypomethylated 9.9912e-01 2.3025e-06 hypomethylated 1.0000e+00 3.8374e-04 hypomethylated -0.3483252 1.1103e-03 weaklyHypometh 2.1352e-02 weaklyHypometh 0.153878 0.077477 0.08060518 5 0.134033 0.083799 0.0502339 5.6503e-02 9.2844e-01 insignificant 8.8933e-01 1.0000000 insignificant 6.3486e-03 0.9994976 weaklyHypermeth 0.19839479 1 insignificant 0.08478206 0.0395671 weaklyHypermeth 1.00000 insignificant 0.413313 0.077477 0.3197212 5 0.474097 0.083799 0.3902978 3.8540e-10 1.0000e+00 hypermethylated 7.6518e-08 1.0000e+00 hypermethylated 1.3689e-06 1.0000e+00 hypermethylated 4.5629e-04 1.0000e+00 hypermethylated 0.4331073 3.9506e-04 hypermethylated 0.0197529 hypermethylated chr17 44286796 44287796 142724 CALCOCO2 ENSG00000136436 0.553943 246 6 0.4526225 124 6 0.548087 113 6 0.710264 138 6 0.560772 77 5 0.589423 300 7 0.559967 111 6 0.545094 143 6 0.504168 102 6 0.545374 103 7 0.54779 213 6 0.619211 73 5 0.581381 145 5 0.538919 31 2 0.554033 115 5 0.599333 94 6 0.633452 72 4 0.676119 141 5 0.625351 149 6 0.738487 210 6 0.503247 44 4 0.640590 89 6 0.502856 174 6 0.449555 58 6 0.494048 26 1 0.570680 216 6 0.511668 81 5 0.626401 76 6 0.645846 115 6 0.540097 189 7 0.584765 140 6 0.567370 313 7 0.4338234 142 7 0.536681 103 6 0.5077207 147 7 0.534066 53 5 0.590703 70 7 0.5762522 243 7 0.5588994 219 6 0.701580 222 6 0.574891 200 7 0.508773 193 6 0.638875 160 6 0.602835 0.483727 0.580539 0.700081 0.572742 0.610225 0.640984 0.574065 0.565626 0.561367 0.571628 0.567502 0.609444 0.582074 0.620186 0.545585 0.652672 0.618734 0.670771 0.681246 0.552802 0.588664 0.562841 0.523474 0.476337 0.647469 0.580201 0.637200 0.752955 0.626142 0.650938 0.602605 0.5038851 0.535783 0.52612913 0.582826 0.675112 0.623482 0.5938542 0.700814 0.606007 0.592856 0.644776 5 0.620000 0.652860 -0.0116699 6 0.578156 0.566544 0.01161241 0.4069787 7.6845e-02 insignificant 1 1.000000 insignificant 0.433183 0.3039142 insignificant 1 1.00000 insignificant 0.03109603 0.203711 insignificant 1 insignificant 0.620000 0.583113 0.0614414 6 0.578156 0.514346 0.06380949 2.5105e-07 6.6565e-01 weaklyHypermeth 4.1157e-06 1.0000e+00 weaklyHypermeth 5.1482e-04 4.8824e-01 weaklyHypermeth 9.1932e-03 1.0000e+00 weaklyHypermeth 0.0543152 7.6173e-02 insignificant 7.8529e-01 insignificant 0.620000 0.619718 -0.02719939 6 0.578156 0.600703 -0.02254754 8.9264e-01 1.7270e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.2439e-01 0.25578030 insignificant 1.0000e+00 1.00000 insignificant -0.0124141 0.7476439 insignificant 1.00000 insignificant 0.652860 0.583113 0.0750939 6 0.566544 0.514346 0.0521971 1.0486e-06 6.4260e-01 weaklyHypermeth 1.8396e-05 1.0000e+00 weaklyHypermeth 1.0944e-03 2.9912e-01 weaklyHypermeth 2.0267e-02 1.0000e+00 weaklyHypermeth 0.0232192 4.4374e-01 insignificant 1.0000e+00 insignificant 0.652860 0.619718 -0.01467998 6 0.566544 0.600703 -0.0341599 5.0268e-01 1.9034e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.7538e-01 0.2758501 insignificant 1.00000000 1 insignificant -0.04351011 0.2942036 insignificant 1.00000 insignificant 0.583113 0.619718 -0.0906585 6 0.514346 0.600703 -0.0863570 8.5199e-01 1.5199e-04 weaklyHypometh 1.0000e+00 2.9229e-03 weaklyHypometh 8.8599e-01 4.2797e-04 weaklyHypometh 1.0000e+00 1.5285e-02 weaklyHypometh -0.0667293 1.4171e-01 insignificant 1.0000000 insignificant chr17 44870911 44871911 142749 ENSG00000218091 0.062738 683 13 0.0081232 873 13 0.151046 797 13 0.027140 701 13 0.119777 531 13 0.144533 1383 13 0.126216 677 13 0.073895 739 13 0.049128 742 13 0.082764 937 13 0.18949 712 13 0.131882 528 12 0.029030 631 13 0.094473 528 11 0.056868 963 13 0.118256 707 9 0.166831 1488 8 0.107597 831 13 0.060292 1096 13 0.025757 1100 13 0.150290 251 14 0.012101 373 13 0.109555 504 13 0.021810 338 13 0.054751 724 13 0.113395 933 13 0.026250 693 13 0.083065 396 13 0.161117 539 13 0.102529 1183 13 0.161550 1265 13 0.082966 703 13 0.4168705 511 13 0.466985 537 13 0.0893971 349 8 0.256629 102 8 0.263897 377 13 0.3152097 753 13 0.0346365 879 13 0.061146 776 13 0.011698 643 13 0.023018 793 12 0.060252 494 13 0.068249 0.014171 0.177257 0.027772 0.059686 0.092580 0.072384 0.093384 0.054315 0.058362 0.082837 0.142686 0.027748 0.088538 0.059524 0.096830 0.177702 0.045744 0.073243 0.040740 0.103088 0.016841 0.045494 0.053674 0.064801 0.039279 0.027488 0.035576 0.096672 0.036977 0.097773 0.064477 0.4502179 0.578673 0.11858144 0.207727 0.289245 0.234211 0.0316540 0.046607 0.013367 0.035418 0.037876 12 0.084966 0.058630 0.0238497 13 0.099362 0.091302 0.00805950 0.4026988 9.7267e-01 insignificant 1 1.000000 insignificant 0.177014 0.9968961 insignificant 1 1.00000 insignificant 0.00134343 0.944822 insignificant 1 insignificant 0.084857 0.285769 -0.2078767 13 0.086702 0.260735 -0.17403256 1.0000e+00 2.0677e-34 hypomethylated 1.0000e+00 1.0339e-31 hypomethylated 1.0000e+00 2.1210e-12 hypomethylated 1.0000e+00 2.1210e-09 hypomethylated -0.2102062 1.1089e-02 weaklyHypometh 1.5619e-01 insignificant 0.084903 0.031799 0.04777434 13 0.099088 0.052381 0.04670765 6.8652e-04 9.9999e-01 weaklyHypermeth 2.1454e-02 1.0000000 weaklyHypermeth 3.7074e-05 0.99999954 weaklyHypermeth 2.6481e-03 1.00000 weaklyHypermeth 0.0531417 0.0029935 weaklyHypermeth 0.23027 insignificant 0.058660 0.286040 -0.2281312 13 0.107415 0.304221 -0.1968065 1.0000e+00 3.1845e-24 hypomethylated 1.0000e+00 1.5922e-21 hypomethylated 1.0000e+00 1.5417e-12 hypomethylated 1.0000e+00 1.5417e-09 hypomethylated -0.2115497 1.0308e-02 weaklyHypometh 1.4726e-01 insignificant 0.058503 0.031799 0.02458621 13 0.101861 0.052381 0.0494798 3.9031e-04 9.9935e-01 weaklyHypermeth 1.3940e-02 1.0000000 weaklyHypermeth 1.7202e-03 0.9992170 weaklyHypermeth 0.07819085 1 weaklyHypermeth 0.05179823 0.0124805 weaklyHypermeth 0.94086 insignificant 0.285986 0.031799 0.2534569 13 0.297983 0.052381 0.2456020 2.5898e-14 1.0000e+00 hypermethylated 2.5898e-11 1.0000e+00 hypermethylated 1.8214e-10 1.0000e+00 hypermethylated 1.8214e-07 1.0000e+00 hypermethylated 0.2633479 4.3300e-03 weaklyHypermeth 0.0936326 weaklyHypermeth chr17 45171856 45172856 142786 SLC35B1 ENSG00000121073 0.785128 274 8 0.8004249 135 8 0.643699 164 8 0.785473 215 8 0.823718 58 4 0.768468 312 8 0.761370 130 8 0.658904 88 8 0.768145 111 8 0.740909 67 8 0.81231 276 8 0.544508 59 4 0.760333 84 8 0.913043 23 1 0.779203 126 8 0.730871 83 8 0.809524 46 6 0.826673 145 8 0.700104 139 8 0.808295 242 8 0.819444 22 2 0.862714 76 8 0.706217 165 8 0.761264 78 5 0.835337 77 7 0.730519 192 8 0.775510 56 4 0.860294 23 1 0.875347 104 7 0.707726 177 8 0.721922 197 8 0.749248 264 8 0.7127300 76 7 0.672619 99 8 0.6933012 119 8 0.759722 69 7 0.715511 82 4 0.6864252 172 8 0.8022643 297 8 0.766821 312 8 0.792584 218 8 0.776482 230 8 0.787005 207 8 0.802992 0.820089 0.717100 0.841495 0.898118 0.802858 0.807203 0.629950 0.794907 0.819729 0.874001 0.701120 0.802361 NA 0.812377 0.776684 0.863773 0.875647 0.731809 0.851475 0.787414 0.894003 0.765723 0.805512 0.853110 0.765368 0.833540 0.837676 0.871321 0.754358 0.787986 0.810517 0.7606786 0.662867 0.74827864 0.828753 0.765436 0.747826 0.8596493 0.816937 0.826711 0.817267 0.823502 4 0.778538 0.795248 0.0028170 8 0.761774 0.755324 0.00644985 0.6158470 7.1827e-01 insignificant 1 1.000000 insignificant 0.898145 0.4594265 insignificant 1 1.00000 insignificant -0.02274001 0.379602 insignificant 1 insignificant 0.778538 0.745543 0.0571620 8 0.761774 0.701820 0.05995374 3.0111e-04 9.9970e-01 weaklyHypermeth 3.8482e-03 1.0000e+00 weaklyHypermeth 2.6196e-02 9.9728e-01 weaklyHypermeth 2.9107e-01 1.0000e+00 insignificant 0.0543370 1.9664e-02 weaklyHypermeth 2.5874e-01 insignificant 0.778538 0.771361 -0.02590313 8 0.761774 0.786253 -0.02447909 9.8654e-01 1.0044e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.1158e-01 0.09905109 insignificant 1.0000e+00 1.00000 insignificant -0.0239764 0.2119933 insignificant 1.00000 insignificant 0.795248 0.745543 0.0550272 8 0.755324 0.701820 0.0535039 1.2791e-03 9.9349e-01 weaklyHypermeth 1.6191e-02 1.0000e+00 weaklyHypermeth 3.2805e-02 9.9791e-01 weaklyHypermeth 3.4531e-01 1.0000e+00 insignificant 0.0770770 3.1725e-03 weaklyHypermeth 5.3771e-02 weaklyHypermeth 0.795248 0.771361 -0.02946062 8 0.755324 0.786253 -0.0309289 9.8222e-01 1.0339e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.8954e-01 0.4705470 insignificant 1.00000000 1 insignificant -0.00123643 0.9501324 insignificant 1.00000 insignificant 0.745543 0.771361 -0.0831472 8 0.701820 0.786253 -0.0844328 9.9986e-01 3.8549e-05 weaklyHypometh 1.0000e+00 8.2019e-04 weaklyHypometh 9.9920e-01 5.1589e-03 weaklyHypometh 1.0000e+00 9.4054e-02 weaklyHypometh -0.0783134 7.2053e-04 weaklyHypometh 0.0285549 weaklyHypometh chr17 45290660 45291660 142796 TAC4 ENSG00000176358 0.881616 720 9 0.7396665 429 10 0.798058 363 10 0.893556 496 8 0.820829 195 8 0.889763 1119 10 0.748986 239 8 0.766687 297 8 0.796267 214 8 0.825971 336 7 0.85598 490 8 0.685714 85 7 0.883522 246 7 0.715953 154 6 0.872672 220 7 0.929167 79 6 0.782430 684 5 0.825925 1507 10 0.879447 722 8 0.830752 637 9 0.907507 134 8 0.901213 247 7 0.800829 335 10 0.893986 146 9 0.864356 283 8 0.903053 617 9 0.730855 218 7 0.731042 91 8 0.878985 528 8 0.864077 531 11 0.918330 937 10 0.851564 519 10 0.5953779 442 11 0.482554 521 8 0.6650332 300 9 0.567696 138 8 0.621361 147 8 0.6530375 558 11 0.7546538 428 8 0.847460 570 10 0.787002 609 9 0.847940 616 8 0.805693 508 10 0.862851 0.803557 0.842189 0.863687 0.897756 0.883530 0.770879 0.851527 0.792166 0.859097 0.832956 0.684892 0.888690 0.846381 0.882404 0.901105 0.817136 0.853597 0.848301 0.855335 0.892955 0.887213 0.861558 0.906531 0.898648 0.911860 0.779212 0.789894 0.853232 0.918381 0.917644 0.870849 0.6594943 0.608076 0.79380696 0.649746 0.696910 0.683783 0.8209253 0.914888 0.836135 0.881264 0.836200 7 0.862977 0.886611 -0.0302486 8 0.840286 0.876310 -0.03602379 0.9978923 8.1429e-03 weaklyHypometh 1 0.740262 insignificant 0.989114 0.0180747 weaklyHypometh 1 1.00000 insignificant -0.03266815 0.186741 insignificant 1 insignificant 0.862977 0.649098 0.2007302 8 0.840286 0.596336 0.24394962 2.1465e-22 1.0000e+00 hypermethylated 8.2559e-21 1.0000e+00 hypermethylated 3.4756e-07 1.0000e+00 hypermethylated 1.1212e-05 1.0000e+00 hypermethylated 0.2236383 8.1382e-05 hypermethylated 2.2606e-03 hypermethylated 0.862977 0.861589 0.00219902 8 0.840286 0.804550 0.03573632 1.1672e-01 7.6655e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.0039e-02 0.82609657 insignificant 1.0000e+00 1.00000 insignificant 0.0125984 0.5998216 insignificant 1.00000 insignificant 0.886611 0.649098 0.2356256 10 0.876310 0.596336 0.2799734 1.3131e-20 1.0000e+00 hypermethylated 6.1917e-19 1.0000e+00 hypermethylated 1.1828e-07 1.0000e+00 hypermethylated 4.7310e-06 1.0000e+00 hypermethylated 0.2563065 1.6799e-05 hypermethylated 6.9997e-04 hypermethylated 0.886611 0.861589 0.03044026 9 0.876310 0.804550 0.0717601 3.1772e-03 9.9511e-01 weaklyHypermeth 8.5871e-02 1.0000000 weaklyHypermeth 1.0441e-02 0.9994368 weaklyHypermeth 0.29830903 1 insignificant 0.04526654 0.1074580 insignificant 1.00000 insignificant 0.649098 0.861589 -0.1944677 9 0.596336 0.804550 -0.2082133 1.0000e+00 9.7077e-08 weaklyHypometh 1.0000e+00 2.9417e-06 weaklyHypometh 9.9999e-01 9.3842e-04 weaklyHypometh 1.0000e+00 2.5169e-02 weaklyHypometh -0.2110399 1.6491e-04 hypomethylated 0.0137429 hypomethylated chr17 45292465 45293465 142797 TAC4 ENSG00000176358 0.810293 93 5 0.6680132 243 5 0.792560 284 5 0.466667 18 1 0.821350 141 5 0.835289 155 5 0.765091 324 5 0.750481 119 5 0.838198 231 5 0.849578 170 5 0.86557 274 5 0.812050 213 5 0.849253 176 5 NA 0 0 0.870467 259 5 0.721843 180 5 0.769055 254 5 0.770000 15 1 0.862165 302 5 0.827545 121 5 0.673939 63 5 1.000000 3 0 0.804959 212 5 0.874916 91 5 1.000000 3 0 0.860506 222 5 0.800366 68 5 0.876838 65 5 0.772738 261 5 0.851637 208 5 0.909005 300 5 0.806014 142 5 0.6557927 261 5 0.927469 187 5 1.0000000 137 3 0.366667 9 0 0.891542 98 5 0.4588556 251 5 0.7226848 91 5 0.797778 84 5 0.632576 33 3 0.712020 60 5 0.855000 27 4 0.803254 0.643631 0.746850 0.446237 0.794488 0.823716 0.759058 0.770161 0.817166 0.841061 0.845265 0.809155 0.813146 NA 0.860270 0.719363 0.747060 0.711290 0.847080 0.795703 0.667058 0.960382 0.808519 0.894569 0.952079 0.826095 0.805979 0.847960 0.769965 0.819079 0.901931 0.832796 0.6450731 0.935363 0.87471397 0.349462 0.900943 0.445165 0.7199484 0.762263 0.583089 0.669225 0.850806 1 0.793673 0.830891 -0.0379796 5 0.807414 0.839079 -0.03166461 0.9901039 4.1933e-02 weaklyHypometh 1 1.000000 insignificant 0.952578 0.0397136 weaklyHypometh 1 1.00000 insignificant -0.06597283 0.065861 lowCoverage 1 lowCoverage 0.793673 0.738070 0.0537711 5 0.807414 0.717081 0.09033265 7.2897e-03 2.9592e-01 weaklyHypermeth 7.3633e-02 1.0000e+00 weaklyHypermeth 4.5695e-01 2.3474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0698827 5.5058e-01 lowCoverage 1.0000e+00 lowCoverage 0.793673 0.715254 0.07888752 5 0.807414 0.727433 0.07998124 9.2506e-04 7.5947e-01 weaklyHypermeth 2.7208e-02 1.0000000 weaklyHypermeth 2.2198e-01 0.44811487 insignificant 1.0000e+00 1.00000 insignificant 0.0425920 0.3643115 lowCoverage 1.00000 lowCoverage 0.830891 0.738070 0.0965843 5 0.839079 0.717081 0.1219973 8.7541e-03 8.6134e-01 weaklyHypermeth 9.2148e-02 1.0000e+00 weaklyHypermeth 2.4505e-01 8.6609e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1358555 2.6955e-01 lowCoverage 1.0000e+00 lowCoverage 0.830891 0.715254 0.11649418 5 0.839079 0.727433 0.1116459 1.9738e-04 9.7808e-01 weaklyHypermeth 7.8951e-03 1.0000000 weaklyHypermeth 3.6070e-02 0.8146332 weaklyHypermeth 0.90176100 1 insignificant 0.10856485 0.0472951 lowCoverage 1.00000 lowCoverage 0.738070 0.715254 0.0063711 5 0.717081 0.727433 -0.0103514 5.8868e-01 7.2489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6597e-01 7.2618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0272907 8.1890e-01 lowCoverage 1.0000000 lowCoverage chr17 45294710 45295710 142798 TAC4 ENSG00000176358 0.769044 223 7 0.6254058 210 7 0.590246 140 7 0.797654 258 5 0.670068 41 5 0.793549 302 7 0.744606 100 7 0.726169 129 7 0.613641 190 5 0.595127 82 5 0.76955 259 7 0.602374 80 7 0.694604 226 7 0.826623 46 4 0.808475 94 6 0.642857 24 0 0.508485 52 5 0.511860 390 6 0.664239 143 7 0.768601 264 7 0.646568 51 6 0.451795 108 5 0.813230 113 5 0.633569 57 5 0.674242 45 4 0.833735 268 7 0.692290 47 5 0.687755 32 4 0.747487 92 5 0.793208 190 7 0.819911 340 7 0.634378 273 7 0.3953378 221 7 0.403089 97 5 0.3863636 114 4 0.084912 81 4 0.526445 103 7 0.1658249 390 7 0.7122875 245 7 0.692279 247 7 0.678741 282 5 0.504132 219 5 0.618453 270 7 0.710475 0.469312 0.488357 0.692699 0.613957 0.681828 0.594341 0.656700 0.508454 0.682150 0.709466 0.423597 0.465967 0.761944 0.733515 0.462069 0.509404 0.475293 0.635291 0.659606 0.632992 0.481634 0.686297 0.644382 0.679596 0.737480 0.750895 0.580901 0.611048 0.682626 0.717564 0.511882 0.2061649 0.486709 0.43063900 0.103170 0.489446 0.038680 0.4755197 0.525286 0.517537 0.465483 0.501611 4 0.667384 0.735149 -0.0559453 7 0.792088 0.745769 0.04631834 0.9440898 7.7263e-02 insignificant 1 1.000000 insignificant 0.974605 0.0589012 insignificant 1 1.00000 insignificant -0.01618870 0.676541 insignificant 1 insignificant 0.667077 0.298211 0.3792134 7 0.740110 0.301513 0.43859631 8.4510e-23 1.0000e+00 hypermethylated 3.5212e-21 1.0000e+00 hypermethylated 1.9982e-08 1.0000e+00 hypermethylated 8.4297e-07 1.0000e+00 hypermethylated 0.3591632 2.2851e-03 weaklyHypermeth 4.0806e-02 weaklyHypermeth 0.667077 0.570863 0.06550977 7 0.740110 0.699126 0.04098380 7.6455e-02 8.8266e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.8656e-02 0.84395396 insignificant 1.0000e+00 1.00000 insignificant 0.0449802 0.3363193 insignificant 1.00000 insignificant 0.737562 0.298211 0.4333541 7 0.789355 0.301513 0.4878412 7.6441e-20 1.0000e+00 hypermethylated 3.0577e-18 1.0000e+00 hypermethylated 1.0132e-08 1.0000e+00 hypermethylated 5.3327e-07 1.0000e+00 hypermethylated 0.3753519 1.4035e-03 weaklyHypermeth 2.5990e-02 weaklyHypermeth 0.734820 0.570863 0.12194096 7 0.682212 0.699126 -0.0169141 4.5834e-04 7.5229e-01 weaklyHypermeth 1.5805e-02 1.0000000 weaklyHypermeth 4.4567e-03 0.9466683 weaklyHypermeth 0.14855541 1 insignificant 0.06116887 0.2412484 insignificant 1.00000 insignificant 0.298507 0.570523 -0.2812354 7 0.344587 0.656144 -0.3115571 9.9852e-01 3.1583e-09 hypomethylated 1.0000e+00 1.2147e-07 hypomethylated 9.9997e-01 8.1054e-05 hypomethylated 1.0000e+00 3.6843e-03 hypomethylated -0.3141830 4.0726e-03 weaklyHypometh 0.0925592 weaklyHypometh chr17 45311562 45312562 142802 TAC4 ENSG00000176358 0.512689 89 5 0.4523810 82 5 1.000000 8 0 0.553333 78 5 0.469048 66 5 0.468067 56 5 0.466667 36 2 0.404545 46 5 0.526667 27 5 0.523810 32 5 0.41923 79 5 0.528571 25 3 0.465641 70 5 0.514286 35 5 0.375000 30 3 0.466667 15 0 0.690909 35 3 0.487977 101 5 0.242857 31 2 0.665205 49 2 0.821429 16 2 0.500000 2 0 0.567220 73 5 0.600000 25 5 0.630065 40 2 0.520588 46 2 0.650000 22 2 0.666667 6 0 0.440657 67 5 0.501170 49 2 0.402500 46 4 0.528889 51 5 0.5255411 64 5 0.430769 32 2 0.4654412 45 2 0.333333 6 0 0.375556 34 4 0.5047619 51 2 0.5739130 62 5 0.573226 76 4 0.477275 84 5 0.545882 49 5 0.457091 69 5 0.639066 0.559233 0.813924 0.711382 0.582753 0.601865 0.585366 0.520510 0.729268 0.567944 0.559568 0.632404 0.589654 0.689895 0.435976 0.658537 0.855876 0.645635 0.444251 0.741228 0.728152 0.476340 0.641099 0.629268 0.689144 0.623027 0.725610 0.598291 0.554724 0.648481 0.516768 0.635772 0.6256995 0.544090 0.58312410 0.355517 0.540650 0.679443 0.7083775 0.646145 0.622194 0.666858 0.612275 0 0.552525 0.616253 -0.0198602 2 0.488226 0.529216 -0.04098979 0.9285788 1.6444e-01 lowCoverage 1 1.000000 lowCoverage 0.659192 0.2354830 lowCoverage 1 1.00000 lowCoverage -0.05742109 0.229496 lowCoverage 1 lowCoverage 0.552525 0.581897 0.0384636 2 0.488226 0.467244 0.02098248 4.0007e-03 1.2847e-01 lowCoverage 4.3019e-02 1.0000e+00 lowCoverage 3.7307e-03 3.0682e-01 lowCoverage 5.1816e-02 1.0000e+00 lowCoverage 0.0724438 1.2614e-01 lowCoverage 1.0000e+00 lowCoverage 0.552525 0.652941 -0.03219873 5 0.488226 0.515929 -0.02770229 9.2810e-01 2.6584e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7481e-01 0.39029750 insignificant 1.0000e+00 1.00000 insignificant -0.0138000 0.7423709 lowCoverage 1.00000 lowCoverage 0.616253 0.581897 0.0548511 2 0.529216 0.467244 0.0619723 7.9764e-03 4.7261e-01 lowCoverage 8.4855e-02 1.0000e+00 lowCoverage 4.1426e-03 6.3305e-01 lowCoverage 6.0038e-02 1.0000e+00 lowCoverage 0.1298649 1.1255e-02 lowCoverage 1.5210e-01 lowCoverage 0.616253 0.652941 -0.01282965 2 0.529216 0.515929 0.0132875 6.2775e-01 5.2004e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.8540e-01 0.5851402 lowCoverage 1.00000000 1 lowCoverage 0.04362110 0.3044961 lowCoverage 1.00000 lowCoverage 0.581897 0.652941 -0.0745268 2 0.467244 0.515929 -0.0486848 7.8479e-01 1.3675e-02 lowCoverage 1.0000e+00 1.6475e-01 lowCoverage 8.5668e-01 2.1898e-03 lowCoverage 1.0000e+00 4.8663e-02 lowCoverage -0.0862438 5.5061e-02 lowCoverage 0.6477740 lowCoverage chr17 45364293 45365293 142811 TAC4 ENSG00000176358 0.791727 174 5 0.5523153 135 5 0.587508 128 5 0.561224 165 4 0.753968 42 3 0.847711 297 5 0.690000 76 3 0.766715 137 5 0.813181 91 5 0.738141 113 5 0.77094 162 5 0.625623 47 3 0.777655 202 5 0.422672 35 2 0.674594 146 5 0.799756 40 4 0.511667 28 3 0.690422 178 4 0.897029 141 5 0.827408 283 5 0.690476 46 5 0.725415 87 4 0.687470 150 5 0.681691 64 4 0.885836 132 4 0.706941 170 5 0.557249 116 4 0.793333 32 3 0.685476 155 5 0.747667 152 5 0.806083 243 5 0.800809 223 5 0.3197639 185 5 0.421351 152 5 0.3222222 266 4 0.129311 131 5 0.377381 62 5 0.1413240 213 5 0.6437669 160 4 0.678196 227 4 0.559106 175 3 0.681754 156 4 0.601245 185 5 0.804860 0.681363 0.662554 0.814708 0.813828 0.835975 0.745537 0.738260 0.847421 0.850043 0.793253 0.688783 0.732259 0.633405 0.746368 0.674814 0.586252 0.655455 0.886210 0.763993 0.975518 0.590238 0.741467 0.851245 0.784276 0.779411 0.626148 0.853861 0.717070 0.857879 0.787110 0.784731 0.2960708 0.303926 0.20239422 0.153781 0.437476 0.056782 0.5979667 0.600612 0.545653 0.607771 0.616844 3 0.761741 0.770554 -0.0018232 5 0.580754 0.654841 -0.07408784 0.6521120 4.5764e-01 insignificant 1 1.000000 insignificant 0.811436 0.2927615 insignificant 1 1.00000 insignificant -0.02569133 0.494010 lowCoverage 1 lowCoverage 0.761741 0.242063 0.5419492 5 0.580754 0.288678 0.29207594 4.5873e-29 1.0000e+00 hypermethylated 2.1844e-27 1.0000e+00 hypermethylated 1.6391e-09 9.9007e-01 hypermethylated 8.6270e-08 1.0000e+00 hypermethylated 0.4197871 6.1109e-05 lowCoverage 1.7969e-03 lowCoverage 0.761450 0.562569 0.17228330 4 0.508159 0.652550 -0.14439015 1.3977e-06 1.0000e+00 lowCoverage 9.3179e-05 1.0000000 lowCoverage 3.3575e-04 0.97739198 lowCoverage 1.6787e-02 1.00000 lowCoverage 0.0721989 0.0654776 lowCoverage 1.00000 lowCoverage 0.770701 0.241824 0.5319769 5 0.697986 0.252593 0.4453933 4.0569e-19 1.0000e+00 hypermethylated 1.5603e-17 1.0000e+00 hypermethylated 3.5158e-08 1.0000e+00 hypermethylated 1.5981e-06 1.0000e+00 hypermethylated 0.4454784 6.3037e-05 lowCoverage 2.0389e-03 lowCoverage 0.770554 0.561598 0.17489130 4 0.654841 0.602914 0.0519277 6.8066e-06 9.9872e-01 lowCoverage 3.7814e-04 1.0000000 lowCoverage 2.4829e-04 0.9985665 lowCoverage 0.01551826 1 lowCoverage 0.09789021 0.0131721 lowCoverage 0.94086 lowCoverage 0.242063 0.561598 -0.3997906 4 0.288678 0.602914 -0.3142361 1.0000e+00 1.1396e-07 lowCoverage 1.0000e+00 3.3516e-06 lowCoverage 1.0000e+00 1.6209e-04 lowCoverage 1.0000e+00 6.4835e-03 lowCoverage -0.3475882 3.9499e-04 lowCoverage 0.0197529 lowCoverage chr17 45367610 45368610 142812 TAC4 ENSG00000176358 0.910023 111 5 0.7930403 63 5 0.859091 58 5 0.881558 120 5 0.732857 37 5 0.841103 211 5 0.721502 62 5 0.823636 37 4 0.795781 59 5 0.780797 64 5 0.87920 81 5 0.753333 14 2 0.772461 101 5 0.820000 28 5 0.758350 69 5 0.626667 30 2 0.658974 41 3 0.743934 177 5 0.908571 58 5 0.861260 151 5 0.642017 53 3 0.845192 66 5 0.811966 51 5 0.645221 46 5 0.807143 55 5 0.656935 65 5 0.618254 69 5 0.597460 57 5 0.745048 72 5 0.719048 61 5 0.823509 72 5 0.840373 127 5 0.3559524 78 5 0.481433 64 5 0.2500000 23 2 0.395833 46 5 0.400746 50 5 0.5382402 92 5 0.6933516 127 5 0.861244 100 5 0.903194 104 5 0.847727 93 5 0.854191 83 5 0.908488 0.789950 0.868584 0.880419 0.734661 0.839615 0.719586 0.817563 0.798308 0.774623 0.883991 0.742857 0.774140 0.821995 0.757455 0.609524 0.674690 0.751561 0.904762 0.867939 0.642000 0.837781 0.805861 0.633446 0.807094 0.667440 0.613524 0.593025 0.746715 0.718497 0.821876 0.842166 0.3654033 0.480203 0.33780369 0.400227 0.397761 0.535101 0.6964878 0.861268 0.908079 0.847738 0.863545 4 0.804707 0.748111 0.0566019 5 0.800054 0.747322 0.05273159 0.0231484 9.7532e-01 weaklyHypermeth 1 1.000000 insignificant 0.024303 0.9968221 weaklyHypermeth 1 1.00000 insignificant 0.06675979 0.051862 lowCoverage 1 lowCoverage 0.804707 0.444759 0.3547476 5 0.800054 0.435557 0.36449642 3.7757e-20 1.0000e+00 hypermethylated 1.3485e-18 1.0000e+00 hypermethylated 2.5523e-08 9.9964e-01 hypermethylated 1.0209e-06 1.0000e+00 hypermethylated 0.3924062 5.1588e-05 lowCoverage 1.6121e-03 lowCoverage 0.804707 0.822485 -0.01553207 5 0.800054 0.813413 -0.01335975 7.9098e-01 4.2208e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.6958e-01 0.32179376 insignificant 1.0000e+00 1.00000 insignificant -0.0358347 0.4043712 lowCoverage 1.00000 lowCoverage 0.748111 0.444759 0.3022204 5 0.747322 0.435557 0.3117648 7.5516e-11 9.9714e-01 hypermethylated 2.0410e-09 1.0000e+00 hypermethylated 3.8228e-06 9.8204e-01 hypermethylated 1.1243e-04 1.0000e+00 hypermethylated 0.3256464 7.2320e-05 lowCoverage 2.1915e-03 lowCoverage 0.748111 0.822485 -0.07418105 5 0.747322 0.813413 -0.0660913 9.5415e-01 8.0817e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8446e-01 0.0200266 weaklyHypometh 1.00000000 1 insignificant -0.10259444 0.0494961 lowCoverage 1.00000 lowCoverage 0.444759 0.822485 -0.3639322 5 0.435557 0.813413 -0.3778562 1.0000e+00 1.7064e-09 hypomethylated 1.0000e+00 7.1102e-08 hypomethylated 1.0000e+00 2.6109e-05 hypomethylated 1.0000e+00 1.3055e-03 hypomethylated -0.4282408 2.5397e-05 lowCoverage 0.0090124 lowCoverage chr17 45419992 45420992 142818 DLX4 ENSG00000108813 0.372937 192 6 0.0799652 143 6 0.194503 186 8 0.123140 210 6 0.302728 142 6 0.184970 455 6 0.207029 157 7 0.189892 162 7 0.156825 104 6 0.110793 149 6 0.22357 131 7 0.063946 43 2 0.056562 149 6 0.092275 142 7 0.100648 136 6 0.151190 72 6 0.414875 50 1 0.174576 220 2 0.148962 179 2 0.053626 452 6 0.293511 81 7 0.093773 116 6 0.074529 140 6 0.143786 109 6 0.126455 89 6 0.101131 284 7 0.125555 229 7 0.117306 145 6 0.213592 138 6 0.114435 265 7 0.142502 417 7 0.305368 270 6 0.0136054 219 7 0.000000 96 4 0.0535714 221 7 0.000000 44 6 0.058033 190 9 0.0000000 202 6 0.0619482 261 2 0.162106 192 2 0.053763 187 2 0.096177 143 2 0.125674 220 7 0.290487 0.182107 0.269347 0.135338 0.345020 0.246376 0.213174 0.268132 0.193524 0.221620 0.307650 0.172800 0.121511 0.162186 0.200196 0.193482 0.408874 0.224158 0.289168 0.115007 0.351801 0.100877 0.195128 0.209970 0.218350 0.167056 0.165266 0.125658 0.301465 0.202636 0.181340 0.366903 0.0059292 0.000000 0.02334630 0.000000 0.017508 0.000000 0.1361283 0.116231 0.147902 0.112511 0.089578 2 0.191422 0.166740 0.0055975 6 0.190819 0.169222 0.02159720 0.2554635 9.3495e-01 insignificant 1 1.000000 insignificant 0.736883 0.1860039 insignificant 1 1.00000 insignificant 0.01582194 0.616075 insignificant 1 insignificant 0.191422 0.018519 0.1541309 6 0.190819 0.064101 0.12671747 8.2966e-12 1.0000e+00 weaklyHypermeth 1.8437e-10 1.0000e+00 weaklyHypermeth 3.1911e-08 1.0000e+00 weaklyHypermeth 1.2273e-06 1.0000e+00 weaklyHypermeth 0.1492821 3.4686e-06 weaklyHypermeth 1.7343e-04 weaklyHypermeth 0.191422 0.132602 0.09132673 2 0.190819 0.111604 0.07921492 1.2837e-04 1.0000e+00 lowCoverage 4.9373e-03 1.0000000 lowCoverage 1.3538e-05 0.99999856 lowCoverage 1.2308e-03 1.00000 lowCoverage 0.0702168 0.0334511 lowCoverage 0.95575 lowCoverage 0.166740 0.018519 0.1401944 6 0.169222 0.064101 0.1051203 8.3422e-10 9.9956e-01 weaklyHypermeth 1.8135e-08 1.0000e+00 weaklyHypermeth 2.0212e-08 1.0000e+00 weaklyHypermeth 9.6248e-07 1.0000e+00 weaklyHypermeth 0.1334602 6.7572e-05 weaklyHypermeth 2.1116e-03 weaklyHypermeth 0.166740 0.132602 0.09059989 2 0.169222 0.111604 0.0576177 5.7704e-05 9.9611e-01 lowCoverage 2.6229e-03 1.0000000 lowCoverage 2.7400e-05 0.9999823 lowCoverage 0.00391430 1 lowCoverage 0.05439488 0.0913377 lowCoverage 1.00000 lowCoverage 0.018519 0.132602 -0.0763792 2 0.064101 0.111604 -0.0475025 9.9657e-01 8.5504e-03 lowCoverage 1.0000e+00 1.0688e-01 lowCoverage 9.9914e-01 1.7941e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0790653 1.2722e-02 lowCoverage 0.2120355 lowCoverage chr17 46000312 46001312 142838 CACNA1G ENSG00000006283 0.706667 56 5 0.8591667 67 5 0.588874 45 5 0.947500 46 3 0.710652 69 4 0.855577 99 5 0.708333 26 3 0.764530 100 5 0.613095 70 5 0.914762 51 5 0.84068 205 5 0.769231 39 3 0.859691 178 5 0.839538 48 3 0.610000 56 4 0.000000 2 0 0.583333 9 0 0.919365 92 3 0.868431 216 5 0.840456 100 5 0.878363 59 3 0.866667 25 3 0.904762 31 4 0.777778 32 3 0.792593 23 3 0.961449 173 5 0.829121 46 5 0.583333 22 2 0.886618 163 5 0.924884 203 5 0.945583 216 5 0.822222 87 5 0.8272727 95 5 0.951786 144 4 0.8396053 202 5 0.800000 6 0 0.796953 79 5 0.9313152 128 3 1.0000000 20 4 0.983333 28 2 1.000000 16 2 0.826389 28 3 0.972222 19 2 0.840136 0.931633 0.631672 0.988265 0.708992 0.931103 0.864994 0.826923 0.663630 0.927405 0.849219 0.960754 0.906322 0.878883 0.710204 NA 0.334163 0.954033 0.860201 0.930054 0.899749 0.986395 0.975705 0.904762 0.896811 0.975510 0.872505 0.918367 0.908696 0.963323 0.940553 0.860544 0.9474335 0.970481 0.89567669 0.979592 0.901784 0.943149 1.0000000 0.948980 1.000000 0.860544 0.931973 1 0.835451 0.903435 -0.0688770 5 0.804672 0.894016 -0.08934401 0.9958649 2.1136e-05 weaklyHypometh 1 0.010568 weaklyHypometh 0.987848 0.0015824 weaklyHypometh 1 0.62817 insignificant -0.10778672 0.060026 lowCoverage 1 lowCoverage 0.835451 0.859327 -0.0410577 5 0.804672 0.856151 -0.05147919 4.2124e-01 2.1150e-04 weaklyHypometh 1.0000e+00 1.7625e-02 weaklyHypometh 9.8955e-01 1.9093e-03 weaklyHypometh 1.0000e+00 1.7357e-01 insignificant -0.1178277 3.9618e-02 lowCoverage 4.5909e-01 lowCoverage 0.835451 0.945946 -0.08955441 2 0.804672 0.958974 -0.15430267 9.9996e-01 6.2290e-04 lowCoverage 1.0000e+00 0.1038170 lowCoverage 9.9999e-01 0.00091045 lowCoverage 1.0000e+00 0.30348 lowCoverage -0.2163946 0.0011848 lowCoverage 0.15717 lowCoverage 0.903435 0.859327 0.0585567 5 0.894016 0.856151 0.0378648 3.3189e-01 4.3477e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2365e-01 5.4658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0100410 8.0595e-01 lowCoverage 1.0000e+00 lowCoverage 0.903435 0.945946 -0.01223302 2 0.894016 0.958974 -0.0649587 7.8839e-01 3.4633e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.7479e-01 0.1048685 lowCoverage 1.00000000 1 lowCoverage -0.10860789 0.0324756 lowCoverage 1.00000 lowCoverage 0.859327 0.945946 -0.0460106 2 0.856151 0.958974 -0.1028235 3.5435e-01 4.2093e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5627e-01 3.1873e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0985669 4.9345e-02 lowCoverage 0.6094392 lowCoverage chr17 46036596 46037596 142842 CACNA1G ENSG00000006283 0.496621 440 10 0.4173832 362 10 0.633960 316 10 0.515125 447 9 0.541969 152 10 0.828776 744 11 0.598836 254 9 0.627626 346 10 0.626512 379 8 0.652178 372 9 0.54959 273 10 0.688641 223 7 0.373470 517 8 0.493098 213 8 0.512796 344 8 0.631151 109 6 0.565938 205 7 0.340947 771 8 0.519994 442 10 0.495102 613 8 0.635445 130 8 0.404837 330 8 0.705093 252 9 0.581402 197 9 0.597587 401 11 0.505324 412 11 0.470894 300 11 0.471705 104 7 0.659781 349 11 0.404959 457 10 0.501436 559 11 0.760440 348 9 0.0726433 423 10 0.123686 340 8 0.2354855 273 9 0.067669 217 11 0.066280 244 10 0.0507468 590 11 0.5401038 415 9 0.455572 446 10 0.452917 458 8 0.297066 388 8 0.357499 384 8 0.486907 0.353791 0.607514 0.493785 0.545508 0.772862 0.510984 0.545510 0.527561 0.545061 0.530545 0.617150 0.217509 0.470302 0.401919 0.552729 0.510880 0.304059 0.453094 0.457826 0.670785 0.349637 0.753750 0.600488 0.696719 0.552848 0.472905 0.537246 0.593414 0.323920 0.428953 0.706264 0.0420358 0.047443 0.37522028 0.080731 0.071406 0.042547 0.5956636 0.457174 0.329057 0.394884 0.383414 8 0.482451 0.531266 -0.0477955 8 0.602381 0.461958 0.14042324 0.8576083 3.6026e-01 insignificant 1 1.000000 insignificant 0.860583 0.3533145 insignificant 1 1.00000 insignificant -0.00275625 0.948198 insignificant 1 insignificant 0.482447 0.081016 0.4005983 8 0.610257 0.067405 0.54285190 1.2216e-39 1.0000e+00 hypermethylated 8.7254e-38 1.0000e+00 hypermethylated 8.0371e-23 1.0000e+00 hypermethylated 2.0093e-20 1.0000e+00 hypermethylated 0.4527339 1.2941e-08 hypermethylated 7.6121e-07 hypermethylated 0.482309 0.407461 0.05585589 8 0.539395 0.458227 0.08116732 4.8051e-02 9.9838e-01 weaklyHypermeth 8.7366e-01 1.0000000 insignificant 2.5397e-03 0.99979692 weaklyHypermeth 8.7577e-02 1.00000 weaklyHypermeth 0.1348542 0.0283596 weaklyHypermeth 0.91037 insignificant 0.531405 0.080977 0.4490551 10 0.461958 0.062590 0.3993678 4.8451e-36 1.0000e+00 hypermethylated 4.8451e-34 1.0000e+00 hypermethylated 1.4255e-17 1.0000e+00 hypermethylated 2.8509e-15 1.0000e+00 hypermethylated 0.4554902 2.7453e-08 hypermethylated 2.1118e-06 hypermethylated 0.531976 0.407461 0.11194504 8 0.565219 0.458227 0.1069923 1.6679e-04 9.9976e-01 weaklyHypermeth 7.0024e-03 1.0000000 weaklyHypermeth 1.5062e-05 0.9999915 weaklyHypermeth 0.00301250 1 weaklyHypermeth 0.13761050 0.0305886 weaklyHypermeth 1.00000 insignificant 0.081094 0.407461 -0.3167438 8 0.079660 0.458227 -0.3785667 1.0000e+00 3.4698e-24 hypomethylated 1.0000e+00 6.9397e-22 hypomethylated 1.0000e+00 6.1246e-10 hypomethylated 1.0000e+00 8.7494e-08 hypomethylated -0.3178797 3.7385e-04 hypomethylated 0.0197529 hypomethylated chr17 46351798 46352798 142854 TOB1 ENSG00000141232 0.578675 128 4 0.3394581 320 7 0.394382 201 6 0.344875 196 6 0.262353 170 6 0.323189 441 6 0.422943 156 6 0.256592 242 7 0.354235 187 6 0.250031 162 6 0.49008 251 7 0.307569 145 6 0.199069 211 6 0.411236 146 6 0.386303 276 6 0.423991 120 6 0.413065 487 2 0.352646 203 6 0.366739 343 6 0.435667 384 6 0.564430 75 5 0.050833 93 4 0.386752 120 6 0.418688 133 7 0.381615 92 6 0.347401 292 7 0.394341 202 6 0.208814 122 6 0.200816 213 6 0.339164 357 7 0.217092 405 7 0.595168 185 6 0.2860701 224 6 0.302988 106 6 0.5720298 109 6 0.142857 16 0 0.347081 209 6 0.2140428 240 6 0.2123077 241 6 0.335317 165 6 0.248073 173 6 0.230983 188 6 0.214416 201 6 0.354188 0.209623 0.308875 0.276487 0.221013 0.398273 0.399122 0.255411 0.310593 0.316255 0.431097 0.343376 0.136391 0.318774 0.205402 0.413120 0.285952 0.241575 0.215052 0.210217 0.375113 0.117427 0.354114 0.363755 0.314407 0.165141 0.352566 0.226699 0.137465 0.175351 0.123953 0.530347 0.0781214 0.126746 0.33805442 0.059242 0.218664 0.088534 0.0966934 0.101789 0.102355 0.114583 0.101249 5 0.338926 0.239843 0.0525365 6 0.292833 0.312618 -0.01978481 0.0177570 9.7090e-01 weaklyHypermeth 1 1.000000 insignificant 0.366524 0.9211267 insignificant 1 1.00000 insignificant 0.02356222 0.636558 insignificant 1 insignificant 0.339710 0.211283 0.1318695 6 0.418333 0.324668 0.09366517 1.8575e-05 9.9557e-01 weaklyHypermeth 2.4767e-04 1.0000e+00 weaklyHypermeth 1.2996e-05 9.9779e-01 weaklyHypermeth 2.8880e-04 1.0000e+00 weaklyHypermeth 0.0548103 4.1788e-01 insignificant 1.0000e+00 insignificant 0.339710 0.098140 0.18680841 6 0.418333 0.254765 0.16356723 2.7731e-11 1.0000e+00 weaklyHypermeth 3.0812e-09 1.0000000 weaklyHypermeth 1.6444e-08 0.99946537 weaklyHypermeth 6.1363e-06 1.00000 weaklyHypermeth 0.1174357 0.0024639 weaklyHypermeth 0.20532 insignificant 0.239597 0.211283 0.0713425 6 0.351359 0.324668 0.0266911 1.4494e-01 7.6863e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0359e-03 9.6045e-01 weaklyHypermeth 3.2837e-02 1.0000e+00 weaklyHypermeth 0.0312481 6.8437e-01 insignificant 1.0000e+00 insignificant 0.239597 0.098140 0.13431017 6 0.351359 0.254765 0.0965931 2.8670e-03 9.5810e-01 weaklyHypermeth 8.1914e-02 1.0000000 weaklyHypermeth 2.6841e-05 0.9897182 weaklyHypermeth 0.00391430 1 weaklyHypermeth 0.09387345 0.0812189 insignificant 1.00000 insignificant 0.211283 0.098140 0.0557726 6 0.324668 0.254765 0.0699021 1.2173e-01 9.8664e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6544e-01 8.5445e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0626254 3.6419e-01 insignificant 1.0000000 insignificant chr17 47026215 47027215 142894 ENSG00000187504 0.962963 72 5 0.8017121 241 5 0.790000 70 5 0.992000 60 2 0.938889 50 5 0.946606 236 5 0.961905 66 5 0.980366 92 3 0.951282 37 2 0.863636 28 2 0.96805 159 5 0.850000 18 0 0.756140 40 2 0.987500 38 2 0.950909 57 4 0.854575 35 2 1.000000 2 0 0.846154 26 2 0.966979 109 2 0.929071 230 5 0.794872 32 2 1.000000 13 0 0.964822 48 2 0.950000 40 2 1.000000 6 0 0.965599 160 5 1.000000 45 5 0.944444 25 2 0.985926 63 2 0.802778 123 5 0.907217 200 5 0.942456 128 5 0.1927950 112 5 0.233333 21 2 0.5833333 12 0 NA 0 0 0.201836 163 5 0.4232166 156 5 0.9826797 76 2 0.923077 52 2 0.888889 42 2 1.000000 26 2 0.976912 53 2 0.907407 0.893169 0.775000 0.980000 0.958333 0.866514 0.904762 0.950915 0.878205 0.909091 0.920114 1.000000 0.890351 0.968750 0.977273 0.854575 1.000000 0.846154 0.917447 0.899600 0.884615 1.000000 0.912055 1.000000 1.000000 0.949713 1.000000 1.000000 0.964815 0.908333 0.951377 0.911695 0.3391304 0.416667 NA NA 0.413680 0.494855 0.9566993 0.923077 0.972222 1.000000 0.930736 0 0.907563 0.945455 -0.0379151 2 0.917498 0.954968 -0.03746967 0.9985612 6.1907e-03 lowCoverage 1 0.619067 lowCoverage 0.996551 0.0152421 lowCoverage 1 1.00000 lowCoverage -0.02323959 0.387486 lowCoverage 1 lowCoverage 0.907563 0.375000 0.5263572 5 0.917498 0.308295 0.60920347 3.5689e-41 1.0000e+00 hypermethylated 3.2444e-39 1.0000e+00 hypermethylated 5.3478e-12 1.0000e+00 hypermethylated 3.5652e-10 1.0000e+00 hypermethylated 0.5880338 1.1638e-03 lowCoverage 2.3276e-02 lowCoverage 0.907563 0.951613 -0.04635981 2 0.917498 0.955255 -0.03775680 9.6513e-01 2.5186e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8688e-01 0.09715768 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0393749 0.1709634 lowCoverage 1.00000 lowCoverage 0.945455 0.375000 0.5582289 2 0.954968 0.308295 0.6466731 2.4962e-36 1.0000e+00 lowCoverage 2.7736e-34 1.0000e+00 lowCoverage 2.2352e-11 1.0000e+00 lowCoverage 1.8626e-09 1.0000e+00 lowCoverage 0.6112734 8.6224e-04 lowCoverage 1.7963e-02 lowCoverage 0.943375 0.951807 -0.01097589 2 0.851362 0.962713 -0.1113504 7.5010e-01 8.8624e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.1696e-01 0.4922280 lowCoverage 1.00000000 1 lowCoverage -0.01613528 0.5908158 lowCoverage 1.00000 lowCoverage 0.375000 0.951613 -0.5479003 2 0.308295 0.955255 -0.6469603 1.0000e+00 9.6460e-18 lowCoverage 1.0000e+00 8.7691e-16 lowCoverage 1.0000e+00 1.0558e-06 lowCoverage 1.0000e+00 6.5986e-05 lowCoverage -0.6274087 7.7098e-04 lowCoverage 0.0285549 lowCoverage chr17 47026377 47027377 142895 ENSG00000187504 0.962963 72 5 0.8017121 241 5 0.790000 70 5 0.992000 60 2 0.938889 50 5 0.946606 236 5 0.961905 66 5 0.980366 92 3 0.951282 37 2 0.863636 28 2 0.96805 159 5 0.850000 18 0 0.756140 40 2 0.987500 38 2 0.950909 57 4 0.854575 35 2 1.000000 2 0 0.846154 26 2 0.966979 109 2 0.929071 230 5 0.794872 32 2 1.000000 13 0 0.964822 48 2 0.950000 40 2 1.000000 6 0 0.965599 160 5 1.000000 45 5 0.944444 25 2 0.985926 63 2 0.802778 123 5 0.907217 200 5 0.942456 128 5 0.1927950 112 5 0.233333 21 2 0.5833333 12 0 NA 0 0 0.201836 163 5 0.4232166 156 5 0.9826797 76 2 0.923077 52 2 0.888889 42 2 1.000000 26 2 0.976912 53 2 0.907407 0.893169 0.775000 0.980000 0.958333 0.866514 0.904762 0.950915 0.878205 0.909091 0.920114 1.000000 0.890351 0.968750 0.977273 0.854575 1.000000 0.846154 0.917447 0.899600 0.884615 1.000000 0.912055 1.000000 1.000000 0.949713 1.000000 1.000000 0.964815 0.908333 0.951377 0.911695 0.3391304 0.416667 NA NA 0.413680 0.494855 0.9566993 0.923077 0.972222 1.000000 0.930736 0 0.907563 0.945455 -0.0379151 2 0.917498 0.954968 -0.03746967 0.9985612 6.1907e-03 lowCoverage 1 0.619067 lowCoverage 0.996551 0.0152421 lowCoverage 1 1.00000 lowCoverage -0.02323959 0.387486 lowCoverage 1 lowCoverage 0.907563 0.375000 0.5263572 5 0.917498 0.308295 0.60920347 3.5689e-41 1.0000e+00 hypermethylated 3.2444e-39 1.0000e+00 hypermethylated 5.3478e-12 1.0000e+00 hypermethylated 3.5652e-10 1.0000e+00 hypermethylated 0.5880338 1.1638e-03 lowCoverage 2.3276e-02 lowCoverage 0.907563 0.951613 -0.04635981 2 0.917498 0.955255 -0.03775680 9.6513e-01 2.5186e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.8688e-01 0.09715768 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0393749 0.1709634 lowCoverage 1.00000 lowCoverage 0.945455 0.375000 0.5582289 2 0.954968 0.308295 0.6466731 2.4962e-36 1.0000e+00 lowCoverage 2.7736e-34 1.0000e+00 lowCoverage 2.2352e-11 1.0000e+00 lowCoverage 1.8626e-09 1.0000e+00 lowCoverage 0.6112734 8.6224e-04 lowCoverage 1.7963e-02 lowCoverage 0.943375 0.951807 -0.01097589 2 0.851362 0.962713 -0.1113504 7.5010e-01 8.8624e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.1696e-01 0.4922280 lowCoverage 1.00000000 1 lowCoverage -0.01613528 0.5908158 lowCoverage 1.00000 lowCoverage 0.375000 0.951613 -0.5479003 2 0.308295 0.955255 -0.6469603 1.0000e+00 9.6460e-18 lowCoverage 1.0000e+00 8.7691e-16 lowCoverage 1.0000e+00 1.0558e-06 lowCoverage 1.0000e+00 6.5986e-05 lowCoverage -0.6274087 7.7098e-04 lowCoverage 0.0285549 lowCoverage chr17 51880730 51881730 143267 ANKFN1 ENSG00000153930 0.99539 97 5 0.85544 150 7 0.802211 127 7 0.96134 108 4 0.98095 79 7 0.91713 242 7 0.93877 113 6 0.92767 112 7 0.795437 39 6 0.95707 44 4 0.90335 229 7 0.96296 26 4 0.967240 84 5 1.00000 18 2 0.953896 85 6 0.83333 39 4 0.898496 64 4 0.547619 36 4 0.905556 79 6 0.905348 153 7 0.911905 45 5 1.00000 8 0 0.84762 54 4 0.879350 86 7 1.000000 5 0 0.962173 194 7 0.89784 61 6 0.86786 32 4 0.95330 86 4 0.93451 192 7 0.96231 270 7 0.90019 202 7 0.684291 163 7 0.723058 69 5 0.69027 247 6 0.656250 25 3 0.776031 80 4 0.711097 249 7 0.881950 201 7 0.935996 226 7 0.89253 183 7 0.880952 36 4 0.97739 167 7 0.997235 0.869523 0.773810 0.977383 0.979048 0.95176 0.94634 0.942548 0.792840 0.950000 0.924660 0.933333 0.947744 0.933251 0.910325 0.817460 0.901215 0.45714 0.910952 0.90271 0.932857 0.988598 0.80857 0.832763 0.954537 0.962694 0.93481 0.89939 0.955495 0.916420 0.956044 0.901383 0.595286 0.806516 0.611778 0.716277 0.777307 0.6661790 0.863932 0.942829 0.896970 0.90476 0.982586 0 0.911123 0.934413 -0.0230028 7 0.90238 0.93526 -0.032882 0.9694120 0.03382765 weaklyHypometh 1 1.00000 insignificant 0.83318 0.424978 insignificant 1 1 insignificant -0.0259604 0.344762 lowCoverage 1 lowCoverage 0.911123 0.707083 0.2070914 7 0.90238 0.700332 2.0205e-01 8.9064e-10 1.0000e+00 hypermethylated 3.4256e-08 1.00000000 hypermethylated 2.4860e-04 0.9999994 hypermethylated 8.5723e-03 1.0000 hypermethylated 0.193628 8.2974e-07 weaklyHypermeth 6.3827e-05 weaklyHypermeth 0.911123 0.922509 -0.012590 7 0.90238 0.92083 -0.0184475 7.1928e-01 3.4970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0189e-01 6.3922e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0133032 6.5859e-01 insignificant 1.0000e+00 insignificant 0.934413 0.707083 0.229947 7 0.93526 0.70033 0.234933 1.2039e-08 1.0000e+00 hypermethylated 6.6882e-07 1.000000 hypermethylated 1.9985e-04 0.9999993 hypermethylated 8.3270e-03 1 hypermethylated 0.2195887 3.4365e-07 lowCoverage 3.8183e-05 lowCoverage 0.934413 0.922509 0.0107711 7 0.93526 0.92083 0.0144344 3.8932e-01 8.5061e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.9603e-01 0.75346891 insignificant 1.0000e+00 1.00000 insignificant 0.0126573 6.0706e-01 lowCoverage 1.00000000 lowCoverage 0.707083 0.922509 -0.2192298 7 0.70033 0.92083 -0.220498 9.9998e-01 5.1312e-04 hypomethylated 1.0000e+00 1.9004e-02 hypomethylated 9.9984e-01 1.4730e-02 weaklyHypometh 1.00000000 4.4674e-01 insignificant -0.2069314 2.4320e-05 hypomethylated 4.8640e-03 hypomethylated chr17 52131463 52132463 143329 NOG ENSG00000183691 0.71767 532 9 0.32105 676 14 0.326713 421 14 0.61101 535 13 0.38008 273 14 0.57105 970 12 0.35400 433 14 0.45081 426 14 0.295682 506 14 0.55057 320 11 0.51688 512 14 0.33091 295 14 0.278627 535 11 0.39575 177 10 0.436297 417 14 0.29264 170 9 0.349925 317 10 0.262851 606 9 0.258896 504 10 0.435678 889 14 0.433036 145 9 0.28517 253 12 0.49469 381 14 0.562493 178 9 0.258532 231 10 0.348514 690 14 0.34505 307 14 0.26301 191 14 0.38492 464 13 0.32172 736 14 0.47066 939 14 0.54608 602 13 0.038555 593 14 0.026095 369 14 0.03719 507 11 0.040000 66 7 0.038732 410 14 0.015889 634 14 0.423467 696 12 0.380793 609 12 0.24267 546 7 0.339542 474 7 0.32538 581 13 0.595760 0.355646 0.360385 0.580045 0.453409 0.56759 0.36990 0.469335 0.358085 0.539493 0.583785 0.362042 0.195647 0.470640 0.405030 0.185997 0.360774 0.30310 0.299628 0.45644 0.560598 0.281537 0.58417 0.493465 0.363018 0.423096 0.37256 0.26410 0.521147 0.359139 0.483782 0.597455 0.056243 0.035080 0.016389 0.038593 0.062982 0.0098252 0.445191 0.364176 0.377724 0.27398 0.354442 6 0.443393 0.446725 -0.0238547 14 0.44547 0.36692 0.078556 0.2790463 0.78312801 insignificant 1 1.00000 insignificant 0.53326 0.796108 insignificant 1 1 insignificant 0.0140324 0.741919 insignificant 1 insignificant 0.443288 0.032571 0.4112369 14 0.37880 0.032517 3.4629e-01 4.8948e-49 1.0000e+00 hypermethylated 1.6316e-46 1.00000000 hypermethylated 7.2306e-29 1.0000000 hypermethylated 3.6153e-26 1.0000 hypermethylated 0.374112 4.4656e-11 hypermethylated 1.4885e-08 hypermethylated 0.443335 0.373021 0.062794 12 0.40586 0.35724 0.0486257 5.7561e-03 9.3101e-01 weaklyHypermeth 1.4390e-01 1.0000e+00 insignificant 3.3699e-02 9.0783e-01 weaklyHypermeth 9.1078e-01 1.0000000 insignificant 0.0644852 1.4707e-01 insignificant 1.0000e+00 insignificant 0.446987 0.032583 0.417465 14 0.39312 0.03484 0.358284 2.3669e-46 1.0000e+00 hypermethylated 7.8898e-44 1.000000 hypermethylated 1.6855e-24 1.0000000 hypermethylated 8.4277e-22 1 hypermethylated 0.3600792 1.2640e-07 hypermethylated 1.8058e-05 hypermethylated 0.446987 0.373021 0.0927513 12 0.39312 0.35724 0.0358874 4.6287e-03 8.0273e-01 weaklyHypermeth 1.2232e-01 1.00000000 insignificant 6.4054e-03 0.93936832 weaklyHypermeth 2.0663e-01 1.00000 insignificant 0.0504529 2.6607e-01 insignificant 1.00000000 insignificant 0.032583 0.373021 -0.3268576 12 0.03484 0.35724 -0.322397 1.0000e+00 2.4813e-29 hypomethylated 1.0000e+00 8.2711e-27 hypomethylated 1.0000e+00 4.9095e-13 hypomethylated 1.00000000 2.4548e-10 hypomethylated -0.3096264 4.4594e-04 hypomethylated 2.9729e-02 hypomethylated chr17 52745335 52746335 143366 ENSG00000197862 0.82623 449 9 0.57467 189 10 0.694040 122 9 0.77875 276 9 0.77083 89 9 0.77214 823 10 0.74584 168 9 0.78086 186 9 0.752733 156 6 0.67905 90 8 0.74303 343 9 0.78030 45 3 0.742180 116 8 0.77883 83 8 0.741684 141 10 0.55821 63 4 NA 0 0 0.785395 406 9 0.795780 390 10 0.742486 789 9 0.633333 46 7 0.38862 42 4 0.71759 187 10 0.731290 121 7 0.892450 62 4 0.721165 300 10 0.70179 290 9 0.66852 61 7 0.76226 243 9 0.68679 329 9 0.76376 373 9 0.78643 410 9 0.677948 213 10 0.720177 176 9 0.72983 140 7 0.888889 49 5 0.737286 177 9 0.834317 368 9 0.840703 424 9 0.856289 393 9 0.76186 287 9 0.907388 195 9 0.77385 283 9 0.778893 0.525718 0.680079 0.698183 0.745505 0.76263 0.73137 0.772506 0.729055 0.707419 0.691332 0.744122 0.794361 0.739258 0.769172 0.472577 NA 0.77444 0.790397 0.68305 0.746888 0.291057 0.74669 0.631339 0.905149 0.670222 0.67563 0.63796 0.705744 0.589829 0.739282 0.761038 0.778692 0.796620 0.810398 0.892116 0.760095 0.8322963 0.810599 0.862496 0.746503 0.90881 0.745529 5 0.741470 0.727273 0.0208283 9 0.75502 0.73321 0.021808 0.1175386 0.77303945 insignificant 1 1.00000 insignificant 0.14441 0.636488 insignificant 1 1 insignificant 0.0346066 0.375653 insignificant 1 insignificant 0.741470 0.797863 -0.0559497 9 0.75502 0.743328 1.1688e-02 1.9060e-03 2.5900e-07 weaklyHypometh 3.5296e-02 0.00025900 weaklyHypometh 3.3625e-01 0.0001306 weaklyHypometh 1.0000e+00 0.1306 insignificant -0.025634 5.0053e-01 insignificant 1.0000e+00 insignificant 0.741470 0.835651 -0.099070 9 0.75502 0.83805 -0.0830346 9.9908e-01 5.1416e-08 weaklyHypometh 1.0000e+00 5.1416e-05 weaklyHypometh 9.9774e-01 8.8102e-06 weaklyHypometh 1.0000e+00 0.0044051 weaklyHypometh -0.0889096 2.4867e-02 weaklyHypometh 6.3761e-01 insignificant 0.727273 0.797863 -0.074572 9 0.73321 0.74333 -0.010121 2.5355e-03 4.6375e-05 weaklyHypometh 4.6954e-02 0.046375 weaklyHypometh 4.6536e-01 0.0051617 weaklyHypometh 1.0000e+00 1 insignificant -0.0602411 2.2374e-01 insignificant 1.0000e+00 insignificant 0.727273 0.835651 -0.1110495 9 0.73321 0.83805 -0.1048430 9.9998e-01 8.4908e-07 weaklyHypometh 1.0000e+00 0.00084908 weaklyHypometh 9.9991e-01 0.00014000 weaklyHypometh 1.0000e+00 0.14000 insignificant -0.1235162 1.3500e-02 weaklyHypometh 0.48700561 insignificant 0.797863 0.835651 -0.0344060 9 0.74333 0.83805 -0.094722 7.0133e-01 4.2517e-06 weaklyHypometh 1.0000e+00 3.1456e-04 weaklyHypometh 7.3026e-01 4.7173e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant -0.0632752 1.6881e-01 insignificant 1.0000e+00 insignificant chr17 52985960 52986960 143418 ENSG00000197862 0.76817 145 3 0.69180 75 3 0.670693 80 5 0.82500 77 3 0.66667 14 0 0.66988 215 5 0.80580 74 5 0.74397 79 5 0.703349 77 5 0.69344 84 4 0.79752 116 5 0.63417 51 3 0.428353 93 5 NA 0 0 0.818182 66 3 0.93333 11 1 0.485495 53 5 0.598295 101 3 0.809091 33 3 0.632522 181 5 0.663333 24 3 0.25316 73 5 0.74862 143 4 0.753595 65 4 0.851111 31 3 0.652151 107 5 0.83393 46 5 0.60000 22 2 0.43376 31 3 0.65396 155 4 0.57983 116 5 0.77649 196 5 0.750238 91 5 0.726638 88 3 0.71552 173 5 0.868421 49 3 0.738384 52 5 0.817558 80 4 0.178713 193 3 0.225640 184 3 0.14560 134 3 0.090115 206 3 0.11151 156 3 0.782688 0.580201 0.647712 0.712783 0.519648 0.64276 0.77609 0.747935 0.757393 0.753946 0.773976 0.527387 0.314295 NA 0.806526 0.896994 0.461795 0.36005 0.675199 0.57667 0.825890 0.261625 0.65825 0.750650 0.774110 0.518034 0.78401 0.73139 0.450263 0.500144 0.455944 0.770452 0.681519 0.613317 0.543229 0.906745 0.663872 0.8243853 0.110484 0.190371 0.218221 0.12767 0.156341 2 0.662769 0.631318 0.0310246 5 0.67367 0.65210 0.021574 0.3936400 0.84971758 insignificant 1 1.00000 insignificant 0.32329 0.938401 insignificant 1 1 insignificant 0.0539911 0.353886 lowCoverage 1 lowCoverage 0.662769 0.754221 -0.0759961 5 0.67367 0.763056 -8.9386e-02 9.7211e-01 2.3253e-03 weaklyHypometh 1.0000e+00 0.30142826 insignificant 9.4390e-01 0.0517091 insignificant 1.0000e+00 1.0000 insignificant -0.065475 9.5190e-02 lowCoverage 1.0000e+00 lowCoverage 0.662769 0.175258 0.487086 3 0.67367 0.15874 0.5149257 1.2325e-23 1.0000e+00 lowCoverage 6.1625e-21 1.0000e+00 lowCoverage 9.0805e-12 1.0000e+00 lowCoverage 4.5402e-09 1.0000000 lowCoverage 0.5536683 1.0677e-10 lowCoverage 3.7789e-08 lowCoverage 0.631318 0.754221 -0.106544 5 0.65210 0.76306 -0.110959 9.8184e-01 1.7759e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.5943e-01 0.0408422 weaklyHypometh 1.0000e+00 1 insignificant -0.1194666 4.6979e-02 lowCoverage 1.0000e+00 lowCoverage 0.631318 0.175258 0.4528320 3 0.65210 0.15874 0.4933522 8.5184e-16 1.0000e+00 lowCoverage 2.8395e-13 1.00000000 lowCoverage 3.3572e-10 1.00000000 lowCoverage 1.6786e-07 1.00000 lowCoverage 0.4996772 2.1809e-07 lowCoverage 0.00010905 lowCoverage 0.754221 0.175258 0.5626271 3 0.76306 0.15874 0.604311 1.7855e-15 1.0000e+00 lowCoverage 1.7855e-12 1.0000e+00 lowCoverage 1.8245e-07 1.0000e+00 lowCoverage 0.00018245 1.0000e+00 lowCoverage 0.6191438 2.5830e-08 lowCoverage 2.5830e-05 lowCoverage chr17 53095186 53096186 143445 ENSG00000210857,ENSG00000222812 0.49889 977 12 0.33436 731 17 0.386198 555 15 0.43713 646 12 0.38804 525 17 0.40617 1353 12 0.34563 586 17 0.44480 566 17 0.455141 528 12 0.39333 314 12 0.43308 664 17 0.29737 238 15 0.416818 333 12 0.38557 350 12 0.506752 394 12 0.30459 150 13 0.635985 55 4 0.517359 1296 12 0.422673 1020 12 0.470040 996 13 0.362504 237 17 0.42598 177 12 0.28508 314 13 0.376342 359 17 0.362433 818 12 0.378380 869 17 0.36140 558 13 0.37858 293 13 0.40463 528 11 0.35053 879 17 0.48428 1173 17 0.38572 691 12 0.256126 508 17 0.340419 548 10 0.29537 501 16 0.083333 394 9 0.326996 451 17 0.146178 765 17 0.336705 834 12 0.365755 543 14 0.34328 734 12 0.398120 974 11 0.33486 607 17 0.406137 0.357722 0.400335 0.424658 0.342843 0.42599 0.37404 0.474577 0.425294 0.424091 0.440538 0.358808 0.397061 0.436645 0.415932 0.348219 0.389919 0.38777 0.423683 0.42852 0.417834 0.378869 0.37554 0.390839 0.406606 0.425146 0.38524 0.37862 0.380253 0.443752 0.411336 0.401923 0.329025 0.372183 0.328635 0.190136 0.336231 0.0764989 0.307951 0.410623 0.411316 0.42688 0.359750 11 0.396595 0.354811 0.0079128 12 0.42965 0.38411 0.045541 0.1025350 0.95453579 insignificant 1 1.00000 insignificant 0.28818 0.934409 insignificant 1 1 insignificant 0.0443403 0.056807 insignificant 1 insignificant 0.396595 0.164505 0.1409868 12 0.42965 0.271126 1.5853e-01 6.0041e-20 1.0000e+00 weaklyHypermeth 5.4583e-18 1.00000000 weaklyHypermeth 5.0316e-08 0.9999984 weaklyHypermeth 5.5906e-06 1.0000 weaklyHypermeth 0.182592 5.7220e-03 weaklyHypermeth 2.0896e-01 insignificant 0.396595 0.254944 0.034430 12 0.42965 0.33402 0.0956349 4.1238e-03 9.9726e-01 weaklyHypermeth 1.0574e-01 1.0000e+00 insignificant 1.7342e-01 9.9537e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0682516 4.5381e-03 weaklyHypermeth 1.5727e-01 insignificant 0.354895 0.165772 0.131857 17 0.38894 0.29455 0.094391 1.5261e-12 1.0000e+00 weaklyHypermeth 1.0901e-10 1.000000 weaklyHypermeth 2.9296e-06 0.9999702 weaklyHypermeth 3.6619e-04 1 weaklyHypermeth 0.1382516 2.1045e-02 weaklyHypermeth 6.1897e-01 insignificant 0.354895 0.255146 0.0247918 12 0.38894 0.36177 0.0271733 8.9255e-02 9.8732e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.0768e-01 0.97457313 insignificant 1.0000e+00 1.00000 insignificant 0.0239113 2.0930e-01 insignificant 1.00000000 insignificant 0.165772 0.255146 -0.1079580 12 0.29455 0.36177 -0.067218 1.0000e+00 6.3983e-04 weaklyHypometh 1.0000e+00 2.2851e-02 weaklyHypometh 1.0000e+00 8.9752e-03 weaklyHypometh 1.00000000 3.2054e-01 insignificant -0.1143403 4.2837e-02 weaklyHypometh 8.9244e-01 insignificant chr17 53194555 53195555 143471 ENSG00000166329 0.45238 125 2 0.40701 229 2 0.674176 125 5 0.39984 119 2 0.62328 165 5 0.56374 362 5 0.55556 126 5 0.65371 166 5 0.534828 72 4 0.30722 80 5 0.60506 273 5 0.60000 51 2 0.241667 135 2 0.65649 102 2 0.265823 158 2 0.42000 23 2 0.000000 1 0 0.515258 132 2 0.607978 177 2 0.334463 284 5 0.756061 78 2 0.23333 63 5 0.81429 48 2 0.464721 68 5 0.540476 41 2 0.495866 263 3 0.24758 181 3 0.22436 39 3 0.61749 127 2 0.25357 253 5 0.37198 360 5 0.71255 168 5 0.000000 93 2 0.000000 103 2 0.32381 230 5 0.533333 12 0 0.111219 206 5 0.212081 212 5 0.033513 176 3 0.139373 103 5 0.00000 71 2 0.469553 70 2 0.37443 98 2 0.384861 0.275765 0.478541 0.304351 0.565563 0.42941 0.48019 0.490806 0.370389 0.315011 0.599385 0.503672 0.192682 0.482009 0.275442 0.539303 0.376561 0.29143 0.199523 0.26065 0.532037 0.031983 0.79152 0.683338 0.541102 0.386327 0.26908 0.54739 0.379224 0.294761 0.227182 0.626861 0.000000 0.000000 0.000000 0.325041 0.017362 0.1784932 0.015606 0.135091 0.000000 0.22517 0.084594 2 0.395869 0.375962 0.0200867 5 0.51299 0.42922 0.083773 0.0496337 0.97579385 weaklyHypermeth 1 1.00000 insignificant 0.46227 0.647179 insignificant 1 1 insignificant -0.0067653 0.927445 lowCoverage 1 lowCoverage 0.395869 0.103972 0.3071440 5 0.51299 0.242886 2.7010e-01 3.2641e-13 9.9820e-01 hypermethylated 1.8134e-11 1.00000000 hypermethylated 5.0216e-07 0.9999923 hypermethylated 3.8627e-05 1.0000 hypermethylated 0.274184 2.0661e-02 lowCoverage 5.4370e-01 lowCoverage 0.395869 0.077220 0.312739 2 0.51299 0.11134 0.4016523 3.3955e-13 1.0000e+00 lowCoverage 3.7727e-11 1.0000e+00 lowCoverage 2.1503e-08 9.9993e-01 lowCoverage 5.3758e-06 1.0000000 lowCoverage 0.2675502 4.1816e-02 lowCoverage 8.5216e-01 lowCoverage 0.375962 0.103972 0.285761 5 0.42922 0.24289 0.186331 8.3322e-06 9.6474e-01 hypermethylated 2.6038e-04 1.000000 hypermethylated 1.2436e-05 0.9999530 hypermethylated 1.0389e-03 1 hypermethylated 0.2809493 2.2308e-02 lowCoverage 6.1968e-01 lowCoverage 0.375962 0.077220 0.2956760 2 0.42922 0.11134 0.3178789 2.8617e-06 1.0000e+00 lowCoverage 1.5061e-04 1.00000000 lowCoverage 1.0148e-05 0.99997117 lowCoverage 8.6702e-04 1.00000 lowCoverage 0.2743155 4.1041e-02 lowCoverage 1.00000000 lowCoverage 0.103972 0.077220 0.0011790 2 0.24289 0.11134 0.131548 1.8300e-01 4.6056e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.2714e-01 2.6989e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0066339 9.5920e-01 lowCoverage 1.0000e+00 lowCoverage chr17 53945707 53946707 143521 HSF5 ENSG00000176160 0.15237 805 11 0.11006 366 11 0.084611 433 12 0.14641 659 10 0.06722 214 10 0.16054 1422 11 0.13323 413 12 0.08554 432 11 0.064818 448 12 0.10402 446 11 0.15792 427 10 0.05781 430 12 0.054185 452 11 0.29365 168 4 0.048993 505 11 0.11692 378 10 0.052375 930 11 0.083169 765 10 0.076407 549 11 0.083668 1263 11 0.089334 211 9 0.09942 389 11 0.13440 412 10 0.099904 332 12 0.065352 275 10 0.069475 434 10 0.09503 447 11 0.15678 233 12 0.13144 445 10 0.06375 530 11 0.09094 698 12 0.11414 881 12 0.104979 324 11 0.218210 355 10 0.31667 283 9 0.025054 195 8 0.137544 209 13 0.122064 491 11 0.056898 948 10 0.074236 848 11 0.11191 690 10 0.102039 914 10 0.13523 870 10 0.058873 0.055164 0.048333 0.057259 0.071991 0.10782 0.10346 0.077151 0.052456 0.060284 0.097491 0.044032 0.036670 0.048658 0.043325 0.046015 0.037077 0.06230 0.065859 0.08013 0.066979 0.075351 0.10794 0.085356 0.032709 0.038405 0.08485 0.10476 0.063719 0.053417 0.073348 0.094725 0.082563 0.054583 0.239968 0.020923 0.164344 0.0935838 0.030136 0.037902 0.070862 0.05768 0.051438 9 0.074402 0.082845 -0.0091621 11 0.11536 0.13310 -0.017739 0.4979591 0.27616552 insignificant 1 1.00000 insignificant 0.27040 0.628807 insignificant 1 1 insignificant 0.0058658 0.704707 insignificant 1 insignificant 0.074415 0.095854 -0.0248836 11 0.12360 0.123332 2.6982e-04 1.1594e-03 6.7340e-03 weaklyHypometh 2.2733e-02 0.61218212 weaklyHypometh 3.9956e-02 0.1750442 inconclusive 7.1349e-01 1.0000 insignificant -0.047390 3.1413e-01 insignificant 1.0000e+00 insignificant 0.074415 0.064871 0.017112 10 0.12360 0.10396 0.0196422 6.7812e-02 7.2324e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6218e-02 8.7265e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0106333 5.8366e-01 insignificant 1.0000e+00 insignificant 0.082687 0.095854 -0.018358 11 0.10689 0.12333 -0.016439 1.3654e-01 2.4920e-01 insignificant 1.0000e+00 1.000000 insignificant 5.0040e-01 0.2873789 insignificant 1.0000e+00 1 insignificant -0.0532563 2.5691e-01 insignificant 1.0000e+00 insignificant 0.082687 0.064871 0.0251381 10 0.10689 0.10396 0.0029336 7.1927e-02 8.0198e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.3985e-01 0.77988778 insignificant 1.0000e+00 1.00000 insignificant 0.0047675 7.7662e-01 insignificant 1.00000000 insignificant 0.095854 0.064871 0.0376402 10 0.12333 0.10396 0.019372 7.5233e-01 5.7894e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3139e-01 8.3235e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0580237 2.2949e-01 insignificant 1.0000e+00 insignificant chr17 54160896 54161896 143533 RAD51C ENSG00000108384 0.61929 177 6 0.47523 117 6 0.555556 40 6 0.62576 153 6 0.59646 49 6 0.64881 131 6 0.65476 42 6 0.63690 56 6 0.458333 29 3 0.61905 25 3 0.63390 142 6 0.88571 19 3 0.675253 72 6 0.60476 36 6 0.600000 24 3 0.56944 30 3 NA 0 0 0.645086 298 5 0.645578 62 7 0.626984 77 6 0.566667 28 3 0.87500 15 0 0.59900 79 6 0.659091 43 3 0.685185 74 6 0.544012 87 6 0.64087 42 6 0.75714 18 2 0.73279 107 6 0.61177 118 6 0.51596 97 6 0.62905 73 6 0.559807 97 6 0.619949 52 6 0.59953 90 6 0.555556 9 0 0.576190 86 6 0.514259 96 6 0.650794 162 6 0.704967 115 6 0.65893 145 6 0.707003 51 3 0.64198 133 6 0.605157 0.460460 0.541528 0.614168 0.585447 0.63868 0.51827 0.623893 0.448643 0.534884 0.619195 0.860465 0.667900 0.586379 0.600000 0.549419 NA 0.65610 0.678571 0.61628 0.645349 0.869186 0.58035 0.595402 0.670543 0.617689 0.63967 0.71124 0.678928 0.588564 0.583434 0.721517 0.557222 0.610025 0.585133 0.590011 0.491860 0.5968661 0.634519 0.691245 0.643065 0.64227 0.625329 0 0.612413 0.646154 -0.0218477 6 0.66767 0.56057 0.107106 0.9907573 0.38082115 insignificant 1 1.00000 insignificant 0.90051 0.238316 insignificant 1 1 insignificant -0.0315424 0.378440 lowCoverage 1 lowCoverage 0.611921 0.571096 0.0626276 6 0.62020 0.492624 1.2757e-01 1.6839e-03 9.5709e-01 weaklyHypermeth 3.2383e-02 1.00000000 weaklyHypermeth 4.6612e-02 0.9574534 weaklyHypermeth 8.1776e-01 1.0000 insignificant 0.048954 6.2160e-02 lowCoverage 1.0000e+00 lowCoverage 0.611921 0.643564 -0.030158 6 0.62020 0.67296 -0.0527645 9.6902e-01 3.2754e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.8461e-01 9.1287e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0528991 4.0422e-02 lowCoverage 8.4213e-01 lowCoverage 0.647436 0.572093 0.084538 6 0.68557 0.55605 0.129520 8.8907e-04 9.9886e-01 weaklyHypermeth 1.9757e-02 1.000000 weaklyHypermeth 1.2353e-02 0.9995266 weaklyHypermeth 2.6855e-01 1 insignificant 0.0804961 2.6098e-02 lowCoverage 6.9452e-01 lowCoverage 0.646983 0.643564 -0.0121369 6 0.64065 0.67296 -0.0323145 8.2544e-01 3.5366e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.0938e-01 0.63297240 insignificant 1.0000e+00 1.00000 insignificant -0.0213567 5.1668e-01 lowCoverage 1.00000000 lowCoverage 0.571096 0.643564 -0.0959680 6 0.49262 0.67296 -0.180337 9.8841e-01 7.6186e-04 weaklyHypometh 1.0000e+00 2.6271e-02 weaklyHypometh 9.8924e-01 5.6863e-03 weaklyHypometh 1.00000000 2.1061e-01 insignificant -0.1018528 7.6466e-04 weaklyHypometh 3.8233e-02 weaklyHypometh chr17 54780315 54781315 143557 YPEL2 ENSG00000175155 0.85323 231 7 0.81763 77 3 0.790476 65 6 0.88249 132 7 0.97222 40 6 0.86370 128 6 0.78134 62 3 0.76488 79 5 0.832483 32 3 0.60643 64 3 0.75850 123 6 0.83333 36 6 0.861345 59 3 NA 0 0 0.878788 51 6 0.75271 58 6 0.543537 50 6 0.935182 105 7 0.825365 95 6 0.883459 111 6 0.933333 13 0 0.82449 43 3 0.84892 75 7 0.599206 36 3 0.777778 18 3 0.833092 107 6 0.93392 37 3 0.65714 21 3 0.69419 64 3 0.76795 88 6 0.71639 91 5 0.85038 159 6 0.484812 74 3 0.814076 67 6 0.72083 67 6 0.828571 35 4 0.591667 30 3 0.648840 113 7 0.896677 210 7 0.884116 200 7 0.92500 180 7 0.877473 216 7 0.89652 219 7 0.833578 0.780800 0.781590 0.825651 0.950980 0.84946 0.80837 0.799720 0.752918 0.741108 0.831337 0.728291 0.846309 NA 0.811052 0.750579 0.696110 0.90168 0.825978 0.85368 0.880674 0.769608 0.86858 0.654139 0.765290 0.783351 0.89023 0.84118 0.754455 0.782987 0.806373 0.768702 0.603190 0.748318 0.617974 0.776961 0.696405 0.6685939 0.862832 0.848265 0.866706 0.83088 0.862951 3 0.833542 0.796543 0.0311351 5 0.83485 0.79393 0.040921 0.0510596 0.97950577 insignificant 1 1.00000 insignificant 0.40889 0.791352 insignificant 1 1 insignificant 0.0260781 0.501980 lowCoverage 1 lowCoverage 0.833542 0.702073 0.1262059 5 0.83485 0.716192 1.1866e-01 1.0482e-06 9.9999e-01 weaklyHypermeth 2.9948e-05 1.00000000 weaklyHypermeth 1.5322e-03 0.9973329 weaklyHypermeth 4.2560e-02 1.0000 weaklyHypermeth 0.131012 6.2610e-02 lowCoverage 1.0000e+00 lowCoverage 0.833542 0.896585 -0.046289 6 0.83485 0.89662 -0.0617657 9.9573e-01 2.2617e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4599e-01 7.7284e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0834783 2.8873e-03 weaklyHypometh 1.1845e-01 insignificant 0.796543 0.702073 0.094950 5 0.79393 0.71619 0.077741 7.2936e-04 9.9741e-01 weaklyHypermeth 1.6576e-02 1.000000 weaklyHypermeth 1.3077e-02 0.9887712 weaklyHypermeth 2.7824e-01 1 insignificant 0.1049341 1.2896e-01 lowCoverage 1.0000e+00 lowCoverage 0.796543 0.896585 -0.0726020 5 0.79393 0.89662 -0.1026870 9.9998e-01 2.6078e-03 weaklyHypometh 1.0000e+00 0.65194530 insignificant 9.9624e-01 0.12779017 insignificant 1.0000e+00 1.00000 insignificant -0.1095563 4.1441e-03 lowCoverage 0.19734005 lowCoverage 0.702073 0.896585 -0.1656773 5 0.71619 0.89662 -0.180428 1.0000e+00 3.2494e-07 weaklyHypometh 1.0000e+00 2.7079e-05 weaklyHypometh 9.9918e-01 9.5727e-04 weaklyHypometh 1.00000000 7.3636e-02 weaklyHypometh -0.2144905 1.0434e-02 lowCoverage 2.9810e-01 lowCoverage chr17 54784931 54785931 143560 YPEL2 ENSG00000175155 0.97538 190 5 0.72434 132 5 0.827870 151 5 0.92491 184 5 0.92185 48 2 0.88841 487 5 0.93024 86 5 0.80182 126 5 0.938457 116 5 0.97085 109 5 0.90097 194 5 0.79889 62 5 0.960366 111 5 0.98400 70 5 0.949077 222 5 1.00000 67 5 0.531063 52 2 0.917115 207 5 0.912200 159 5 0.959605 303 5 0.909740 52 3 0.90319 92 5 0.91919 71 5 0.979310 65 5 0.958929 70 5 0.956623 162 5 0.85426 73 5 0.98039 84 5 0.93500 139 5 0.95584 190 5 0.92766 313 5 0.93146 229 5 0.879506 145 5 0.828687 71 5 0.10268 78 2 0.769444 30 2 0.650361 135 5 0.790458 158 5 0.968929 165 5 0.968186 146 5 0.90667 158 5 0.951986 163 5 0.96871 174 5 0.955825 0.805022 0.781789 0.902424 0.854989 0.90267 0.87209 0.931473 0.913128 0.932525 0.866814 0.927034 0.965352 0.972542 0.933678 1.000000 0.770427 0.87729 0.911690 0.93830 0.817045 0.856231 0.85003 0.964494 0.964475 0.946197 0.83970 0.95962 0.912500 0.963777 0.925415 0.950425 0.825285 0.757935 0.239998 0.861653 0.728285 0.8518658 0.942691 0.942159 0.916208 0.96010 0.958919 3 0.906372 0.924026 -0.0174431 5 0.83605 0.95162 -0.115566 0.9728096 0.11509705 insignificant 1 1.00000 insignificant 0.97299 0.521310 insignificant 1 1 insignificant -0.0434283 0.117174 lowCoverage 1 lowCoverage 0.906341 0.735818 0.1673270 5 0.80872 0.641513 1.6721e-01 2.0187e-07 9.9997e-01 weaklyHypermeth 5.9373e-06 1.00000000 weaklyHypermeth 3.3193e-04 0.9999774 weaklyHypermeth 1.0373e-02 1.0000 weaklyHypermeth 0.220682 1.2119e-01 lowCoverage 1.0000e+00 lowCoverage 0.907196 0.940447 -0.038016 5 0.92047 0.95255 -0.0320766 9.8480e-01 3.1530e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5023e-01 1.1078e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0620240 3.3699e-02 lowCoverage 7.8370e-01 lowCoverage 0.923779 0.735818 0.185851 5 0.94355 0.64151 0.302038 1.2855e-05 9.9998e-01 weaklyHypermeth 3.7809e-04 1.000000 weaklyHypermeth 1.6376e-03 0.9999971 weaklyHypermeth 5.1176e-02 1 weaklyHypermeth 0.2641102 7.4872e-02 lowCoverage 1.0000e+00 lowCoverage 0.923729 0.940447 -0.0219281 5 0.93226 0.95255 -0.0202846 9.4770e-01 2.0105e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.1535e-01 0.25362507 insignificant 1.0000e+00 1.00000 insignificant -0.0185957 2.6647e-01 lowCoverage 1.00000000 lowCoverage 0.738211 0.940447 -0.2098109 5 0.76982 0.95255 -0.182731 9.9990e-01 1.2468e-03 weaklyHypometh 1.0000e+00 3.8964e-02 weaklyHypometh 9.9999e-01 4.7330e-04 hypomethylated 1.00000000 4.3027e-02 hypomethylated -0.2827058 6.1420e-02 lowCoverage 1.0000e+00 lowCoverage chr17 54868582 54869582 143572 YPEL2 ENSG00000175155 0.87036 234 7 0.70282 300 7 0.868760 117 7 0.76782 118 7 0.93095 72 7 0.81218 351 7 0.74771 108 7 0.88744 132 7 0.852005 101 7 0.89872 78 7 0.82527 319 7 0.71293 35 4 0.870822 113 7 0.96970 41 3 0.850471 112 7 0.80816 33 5 0.516071 37 3 0.845879 102 7 0.876027 174 7 0.857958 283 7 0.781746 59 7 0.85516 47 6 0.90272 147 7 0.857714 113 7 0.853968 42 5 0.878599 326 7 0.78625 86 7 0.83503 52 7 0.78869 112 7 0.87107 380 7 0.87532 497 7 0.84924 354 7 0.869280 238 7 0.776955 102 7 0.75203 276 5 0.875000 31 4 0.890800 182 7 0.817064 329 7 0.833647 219 7 0.835766 234 7 0.82824 120 7 0.915006 137 5 0.84574 114 7 0.841315 0.698479 0.854812 0.737671 0.906417 0.79408 0.73448 0.865864 0.866939 0.881828 0.811441 0.713649 0.856384 0.846186 0.834871 0.796180 0.649930 0.81936 0.856984 0.84165 0.781016 0.886512 0.89822 0.820693 0.845915 0.857015 0.76561 0.81774 0.762245 0.848976 0.850767 0.837806 0.866573 0.793563 0.760009 0.873231 0.897543 0.8020234 0.808601 0.816325 0.826076 0.89858 0.842073 2 0.823077 0.871332 -0.0356407 7 0.82161 0.85879 -0.037181 0.9932505 0.00398788 weaklyHypometh 1 0.99697 insignificant 0.83137 0.132030 insignificant 1 1 insignificant -0.0210232 0.405290 insignificant 1 insignificant 0.823077 0.843696 -0.0158017 7 0.82161 0.836815 -1.5205e-02 6.7257e-01 1.8011e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.3260e-01 0.0976012 insignificant 1.0000e+00 1.0000 insignificant -0.006586 8.4040e-01 insignificant 1.0000e+00 insignificant 0.823077 0.843447 -0.030331 7 0.82161 0.85521 -0.0335959 6.6363e-01 1.5876e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.7852e-01 2.8208e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0280768 3.1722e-01 insignificant 1.0000e+00 insignificant 0.871332 0.843696 0.025449 7 0.85879 0.83681 0.021976 2.8569e-01 3.8342e-01 insignificant 1.0000e+00 1.000000 insignificant 8.2322e-01 0.2147605 insignificant 1.0000e+00 1 insignificant 0.0144372 5.9439e-01 insignificant 1.0000e+00 insignificant 0.871332 0.843447 0.0028334 7 0.85879 0.85521 0.0035849 6.0927e-01 2.4173e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.4276e-01 0.09698953 insignificant 1.0000e+00 1.00000 insignificant -0.0070536 7.2943e-01 insignificant 1.00000000 insignificant 0.843696 0.843447 -0.0141530 7 0.83681 0.85521 -0.018391 8.7176e-01 3.9463e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5884e-01 5.0429e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0214908 4.6870e-01 insignificant 1.0000e+00 insignificant chr17 55215073 55216073 143591 TMEM49 ENSG00000062716 0.82078 303 7 0.74781 217 7 0.729967 184 7 0.82284 220 7 0.74603 24 3 0.78325 572 7 0.77778 28 2 0.73575 64 3 0.652381 38 3 0.86383 37 2 0.85694 92 3 0.78571 15 2 0.869048 54 3 0.70614 46 3 0.820513 39 3 0.57778 13 2 0.500000 2 0 0.717559 243 7 0.660475 55 3 0.857678 482 7 0.863095 22 2 0.86806 33 2 0.84983 156 7 0.893653 42 2 0.710714 41 2 0.896884 281 7 0.45476 58 3 0.64571 25 2 0.76637 67 3 0.74438 302 7 0.74496 282 7 0.81439 422 7 0.772184 197 7 0.869105 53 3 0.78559 217 6 1.000000 8 0 0.662121 58 3 0.686039 251 7 0.870171 283 6 0.876831 352 7 0.80398 218 7 0.853988 188 5 0.82462 251 7 0.802322 0.696322 0.696865 0.851656 0.698217 0.78929 0.78807 0.702200 0.672840 0.822803 0.833436 0.876543 0.906820 0.695582 0.790123 0.445267 0.535675 0.73047 0.785995 0.78106 0.722222 0.828189 0.84053 0.846099 0.721947 0.819474 0.78733 0.66420 0.784171 0.691299 0.707627 0.799129 0.742559 0.864078 0.841591 0.968372 0.645903 0.6037336 0.814815 0.857405 0.773330 0.81517 0.819408 2 0.789589 0.807048 -0.0259883 7 0.84143 0.78227 0.059163 0.8397938 0.10350209 insignificant 1 1.00000 insignificant 0.82537 0.140712 insignificant 1 1 insignificant -0.0194534 0.653987 lowCoverage 1 lowCoverage 0.789589 0.767857 0.0176586 7 0.84143 0.734580 1.0685e-01 8.9549e-02 6.7860e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.8647e-01 0.8769585 insignificant 1.0000e+00 1.0000 insignificant -0.044226 4.5092e-01 lowCoverage 1.0000e+00 lowCoverage 0.789358 0.834365 -0.047927 7 0.80179 0.86296 -0.0611690 9.9991e-01 1.0752e-03 weaklyHypometh 1.0000e+00 3.3367e-01 insignificant 9.9994e-01 2.4398e-03 weaklyHypometh 1.0000e+00 0.8132605 insignificant -0.0943038 1.5005e-03 lowCoverage 8.3362e-02 lowCoverage 0.807048 0.767857 0.044322 7 0.78227 0.73458 0.047686 1.4870e-01 9.6471e-01 insignificant 1.0000e+00 1.000000 insignificant 5.5549e-01 0.9654616 insignificant 1.0000e+00 1 insignificant -0.0247731 7.0093e-01 lowCoverage 1.0000e+00 lowCoverage 0.808251 0.834365 -0.0185830 7 0.82783 0.86296 -0.0351227 6.5652e-01 7.3882e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 6.3777e-01 0.07133229 insignificant 1.0000e+00 1.00000 insignificant -0.0748504 7.7553e-02 lowCoverage 1.00000000 lowCoverage 0.768638 0.834365 -0.0654875 7 0.75156 0.86296 -0.111397 9.8004e-01 8.2902e-04 weaklyHypometh 1.0000e+00 2.7634e-02 weaklyHypometh 9.6904e-01 5.8192e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.0500774 3.8052e-01 lowCoverage 1.0000e+00 lowCoverage chr17 55865431 55866431 143621 C17orf64 ENSG00000141371 0.73897 264 5 0.64871 69 5 0.571636 99 5 0.72243 376 5 0.70000 44 5 0.54966 251 5 0.73284 122 5 0.64030 123 5 0.730375 91 5 0.76944 99 5 0.67605 152 5 0.59181 79 5 0.667251 91 5 NA 0 0 0.722178 126 5 0.58698 62 5 0.605878 111 5 0.701894 303 5 0.799499 91 5 0.583350 291 5 0.533757 62 5 0.53856 141 5 0.53190 146 5 0.755556 77 5 0.698168 65 5 0.510396 120 5 0.63521 88 5 0.78308 53 5 0.53661 72 5 0.65480 130 5 0.69515 141 5 0.63447 250 5 0.538105 100 5 0.596667 69 5 0.69309 169 3 0.592821 71 5 0.675577 72 5 0.685040 137 5 0.748544 389 5 0.733263 295 5 0.73635 289 5 0.711139 259 5 0.77542 296 5 0.692297 0.603092 0.497782 0.617732 0.635165 0.50218 0.68389 0.571314 0.678268 0.672454 0.630485 0.517887 0.607020 NA 0.703141 0.520687 0.519241 0.64858 0.777979 0.65808 0.578519 0.473449 0.48044 0.702279 0.669162 0.453026 0.56612 0.73362 0.477450 0.606538 0.629121 0.570171 0.528688 0.536569 0.719371 0.534694 0.648152 0.6666913 0.705294 0.708010 0.683172 0.65213 0.736748 5 0.657525 0.586617 0.0569001 5 0.69352 0.51622 0.177296 0.0044048 0.99878818 weaklyHypermeth 1 1.00000 insignificant 0.14845 0.931970 insignificant 1 1 insignificant 0.0448499 0.178375 lowCoverage 1 lowCoverage 0.657274 0.635922 -0.0367736 5 0.67222 0.672283 -6.0372e-05 1.7101e-01 6.3456e-02 insignificant 1.0000e+00 1.00000000 insignificant 1.5398e-01 0.5285118 insignificant 1.0000e+00 1.0000 insignificant 0.040271 2.2161e-01 lowCoverage 1.0000e+00 lowCoverage 0.657274 0.748691 -0.074649 5 0.67222 0.74476 -0.0725346 9.9963e-01 2.1862e-03 weaklyHypometh 1.0000e+00 3.3367e-01 insignificant 9.9241e-01 7.0529e-03 weaklyHypometh 1.0000e+00 0.8816118 insignificant -0.0704559 1.9197e-03 lowCoverage 1.0104e-01 lowCoverage 0.587054 0.635922 -0.095973 5 0.61947 0.67228 -0.052815 7.0310e-01 5.4662e-04 weaklyHypometh 1.0000e+00 0.273308 insignificant 5.0876e-01 0.1519989 insignificant 1.0000e+00 1 insignificant -0.0045787 9.0484e-01 lowCoverage 1.0000e+00 lowCoverage 0.587054 0.748691 -0.1333053 5 0.61947 0.74476 -0.1252897 9.9974e-01 2.2855e-06 weaklyHypometh 1.0000e+00 0.00114273 weaklyHypometh 8.8538e-01 0.00051897 weaklyHypometh 1.0000e+00 0.25948 insignificant -0.1153057 1.5638e-03 weaklyHypometh 0.09773790 weaklyHypometh 0.635922 0.748691 -0.0453327 5 0.67228 0.74476 -0.072474 9.2611e-01 9.7302e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7262e-01 4.8927e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant -0.1107270 6.1355e-03 lowCoverage 1.9173e-01 lowCoverage chr17 56745094 56746094 143748 ENSG00000213227 0.95359 84 4 0.91833 65 5 0.750000 13 0 0.91128 64 3 0.93750 17 2 0.87022 130 5 0.50000 5 0 0.74143 43 4 0.520833 15 1 0.97222 48 4 0.92430 209 5 1.00000 10 1 0.766667 50 4 0.95238 15 2 0.888889 35 3 1.00000 2 0 0.896296 18 2 0.833333 22 1 0.953551 91 5 0.910000 91 5 0.964615 41 4 0.96078 35 2 0.89286 21 2 1.000000 19 2 0.917729 72 3 0.970879 90 5 0.83868 46 4 0.72222 8 0 0.83915 80 4 0.96411 92 5 0.94537 134 5 0.93417 75 4 0.792564 73 5 0.966667 54 4 1.00000 68 4 0.894737 33 3 0.811429 30 3 0.855556 104 5 0.798077 21 1 0.975294 60 3 0.97727 28 1 0.000000 1 0 0.70671 26 2 0.959239 1.000000 0.765625 0.866071 0.765625 0.93446 0.84120 0.921875 0.755208 0.918403 0.982028 1.000000 0.937500 0.995096 0.786458 0.872452 0.805556 0.37500 0.926457 0.94271 0.901442 0.880525 0.98214 1.000000 0.878319 0.899554 0.94371 0.97917 0.794712 0.966518 0.994048 0.895833 0.662260 0.947917 1.000000 0.996291 0.709821 0.7916667 0.531250 0.944853 1.000000 NA 0.577381 0 0.900682 0.928471 -0.0283538 5 0.90221 0.92882 -0.026609 0.7814711 0.08022574 insignificant 1 1.00000 insignificant 0.82555 0.110635 insignificant 1 1 insignificant -0.0525065 0.186869 lowCoverage 1 lowCoverage 0.900682 0.850829 0.0515125 5 0.90221 0.876560 2.5652e-02 8.2233e-02 5.8525e-01 insignificant 9.9075e-01 1.00000000 insignificant 5.6257e-01 0.4521884 insignificant 1.0000e+00 1.0000 insignificant -0.026784 5.7300e-01 lowCoverage 1.0000e+00 lowCoverage 0.900682 0.845588 0.038559 2 0.90221 0.89185 0.0103659 2.2306e-01 6.7534e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7284e-01 5.7463e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.1685701 4.0694e-01 lowCoverage 1.0000e+00 lowCoverage 0.928471 0.850829 0.080300 5 0.92882 0.87656 0.052261 1.9590e-03 7.3893e-01 weaklyHypermeth 3.6963e-02 1.000000 weaklyHypermeth 1.4652e-01 0.6163322 insignificant 1.0000e+00 1 insignificant 0.0257220 5.4420e-01 lowCoverage 1.0000e+00 lowCoverage 0.928471 0.845588 0.0877986 2 0.92882 0.89185 0.0369748 1.2327e-01 8.5301e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.6806e-01 0.63905639 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.2210766 2.8930e-01 lowCoverage 1.00000000 lowCoverage 0.850829 0.845588 -0.0593127 2 0.87656 0.89185 -0.015286 8.3418e-01 6.2358e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3273e-01 8.6033e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1953545 3.4388e-01 lowCoverage 1.0000e+00 lowCoverage chr17 56745418 56746418 143749 ENSG00000213227 0.95359 84 4 0.91833 65 5 0.750000 13 0 0.91128 64 3 0.93750 17 2 0.87022 130 5 0.50000 5 0 0.74143 43 4 0.520833 15 1 0.97222 48 4 0.92430 209 5 1.00000 10 1 0.766667 50 4 0.95238 15 2 0.888889 35 3 1.00000 2 0 0.896296 18 2 0.833333 22 1 0.953551 91 5 0.910000 91 5 0.964615 41 4 0.96078 35 2 0.89286 21 2 1.000000 19 2 0.917729 72 3 0.970879 90 5 0.83868 46 4 0.72222 8 0 0.83915 80 4 0.96411 92 5 0.94537 134 5 0.93417 75 4 0.792564 73 5 0.966667 54 4 1.00000 68 4 0.894737 33 3 0.811429 30 3 0.855556 104 5 0.798077 21 1 0.975294 60 3 0.97727 28 1 0.000000 1 0 0.70671 26 2 0.959239 1.000000 0.765625 0.866071 0.765625 0.93446 0.84120 0.921875 0.755208 0.918403 0.982028 1.000000 0.937500 0.995096 0.786458 0.872452 0.805556 0.37500 0.926457 0.94271 0.901442 0.880525 0.98214 1.000000 0.878319 0.899554 0.94371 0.97917 0.794712 0.966518 0.994048 0.895833 0.662260 0.947917 1.000000 0.996291 0.709821 0.7916667 0.531250 0.944853 1.000000 NA 0.577381 0 0.900682 0.928471 -0.0283538 5 0.90221 0.92882 -0.026609 0.7814711 0.08022574 insignificant 1 1.00000 insignificant 0.82555 0.110635 insignificant 1 1 insignificant -0.0525065 0.186869 lowCoverage 1 lowCoverage 0.900682 0.850829 0.0515125 5 0.90221 0.876560 2.5652e-02 8.2233e-02 5.8525e-01 insignificant 9.9075e-01 1.00000000 insignificant 5.6257e-01 0.4521884 insignificant 1.0000e+00 1.0000 insignificant -0.026784 5.7300e-01 lowCoverage 1.0000e+00 lowCoverage 0.900682 0.845588 0.038559 2 0.90221 0.89185 0.0103659 2.2306e-01 6.7534e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7284e-01 5.7463e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.1685701 4.0694e-01 lowCoverage 1.0000e+00 lowCoverage 0.928471 0.850829 0.080300 5 0.92882 0.87656 0.052261 1.9590e-03 7.3893e-01 weaklyHypermeth 3.6963e-02 1.000000 weaklyHypermeth 1.4652e-01 0.6163322 insignificant 1.0000e+00 1 insignificant 0.0257220 5.4420e-01 lowCoverage 1.0000e+00 lowCoverage 0.928471 0.845588 0.0877986 2 0.92882 0.89185 0.0369748 1.2327e-01 8.5301e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.6806e-01 0.63905639 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.2210766 2.8930e-01 lowCoverage 1.00000000 lowCoverage 0.850829 0.845588 -0.0593127 2 0.87656 0.89185 -0.015286 8.3418e-01 6.2358e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3273e-01 8.6033e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1953545 3.4388e-01 lowCoverage 1.0000e+00 lowCoverage chr17 56874898 56875898 143769 C17orf82 ENSG00000187013 0.90981 275 12 0.62542 191 11 0.708899 156 10 0.75066 182 9 0.90117 93 9 0.76262 411 12 0.73667 91 8 0.76598 215 10 0.619643 133 11 0.79889 216 12 0.71847 339 12 0.56250 45 5 0.694465 353 10 0.88683 134 7 0.777151 148 11 0.71500 24 1 0.446429 43 2 0.739803 278 11 0.710454 344 12 0.609835 253 11 0.714149 115 7 0.68234 149 10 0.71901 208 10 0.712781 109 8 0.701766 203 9 0.826319 267 12 0.64543 173 11 0.54878 60 6 0.85834 261 12 0.81504 291 10 0.75528 416 12 0.92199 333 12 0.244848 301 13 0.204541 267 12 0.11458 131 6 0.190078 112 8 0.289926 194 12 0.149988 415 12 0.619694 212 12 0.700581 291 12 0.72414 200 11 0.584424 211 10 0.73603 203 9 0.880206 0.682711 0.810357 0.846738 0.904545 0.82779 0.73699 0.832257 0.726273 0.824457 0.830881 0.510931 0.835678 0.820184 0.892493 0.752218 0.507631 0.75026 0.883030 0.80252 0.824321 0.751925 0.80363 0.795323 0.837640 0.841387 0.81034 0.81680 0.880106 0.825382 0.919557 0.878923 0.101761 0.148992 0.115647 0.087315 0.206464 0.1019658 0.707942 0.569428 0.627651 0.42547 0.782139 2 0.816373 0.840944 -0.0289743 10 0.68234 0.65255 0.029797 0.9567131 0.07149077 insignificant 1 1.00000 insignificant 0.94827 0.029105 weaklyHypometh 1 1 insignificant -0.0197336 0.613954 insignificant 1 insignificant 0.816004 0.131171 0.6836575 11 0.66489 0.189053 4.7584e-01 4.4974e-101 1.0000e+00 hypermethylated 2.2487e-98 1.00000000 hypermethylated 1.0210e-22 0.9999799 hypermethylated 3.4032e-20 1.0000 hypermethylated 0.523040 2.1298e-10 hypermethylated 5.3244e-08 hypermethylated 0.817020 0.684870 0.148487 11 0.68123 0.63531 0.0459162 8.8943e-10 9.0471e-01 weaklyHypermeth 5.9295e-08 1.0000e+00 weaklyHypermeth 3.4388e-03 8.7251e-01 weaklyHypermeth 1.3226e-01 1.0000000 insignificant 0.0490617 2.3848e-01 insignificant 1.0000e+00 insignificant 0.840619 0.131783 0.714227 11 0.61992 0.21405 0.405866 1.9381e-84 9.6722e-01 hypermethylated 9.6906e-82 1.000000 hypermethylated 5.6415e-21 0.9999099 hypermethylated 1.8805e-18 1 hypermethylated 0.5427738 6.0777e-10 hypermethylated 2.0259e-07 hypermethylated 0.844237 0.685484 0.1723360 10 0.70971 0.67268 0.0370232 5.1930e-12 5.3636e-01 weaklyHypermeth 6.4912e-10 1.00000000 weaklyHypermeth 8.5468e-06 0.83493216 weaklyHypermeth 8.6702e-04 1.00000 weaklyHypermeth 0.0687953 1.2771e-01 insignificant 1.00000000 insignificant 0.131020 0.684870 -0.5331541 11 0.19895 0.63531 -0.436366 1.0000e+00 6.6368e-30 hypomethylated 1.0000e+00 3.3184e-27 hypomethylated 1.0000e+00 1.9910e-12 hypomethylated 1.00000000 6.6368e-10 hypomethylated -0.4739785 1.4152e-06 hypomethylated 7.0759e-04 hypomethylated chr17 56875171 56876171 143770 C17orf82 ENSG00000187013 0.91300 558 17 0.72402 381 18 0.762368 280 17 0.82153 382 14 0.83412 166 15 0.82102 717 17 0.81266 207 15 0.81503 369 17 0.685705 226 16 0.84852 278 16 0.77695 633 19 0.62130 93 9 0.728269 492 14 0.81650 142 7 0.829013 208 15 0.81493 59 5 0.575376 551 7 0.748124 411 16 0.761456 602 17 0.689523 506 16 0.736534 205 14 0.71841 213 16 0.77533 355 15 0.797675 169 13 0.687872 282 16 0.868258 491 19 0.71204 273 18 0.57667 129 10 0.88750 408 17 0.86802 527 17 0.81627 696 19 0.93783 545 17 0.375110 527 20 0.264975 385 17 0.15258 349 13 0.286862 217 14 0.363875 315 19 0.208149 673 19 0.688129 454 17 0.739372 534 17 0.79878 449 16 0.607204 387 15 0.77258 468 14 0.900205 0.782437 0.860882 0.903521 0.836097 0.88434 0.83522 0.868592 0.811424 0.889107 0.879774 0.705714 0.907233 0.794195 0.889139 0.874567 0.730700 0.84479 0.923316 0.87821 0.753227 0.832920 0.88255 0.881684 0.858835 0.902267 0.84628 0.86232 0.904276 0.903564 0.941097 0.919624 0.364447 0.225994 0.237679 0.307163 0.456587 0.1865918 0.817233 0.728553 0.780993 0.57653 0.804498 6 0.867870 0.874738 -0.0176835 15 0.75436 0.69945 0.054905 0.9837999 0.12982998 insignificant 1 1.00000 insignificant 0.97752 0.076520 insignificant 1 1 insignificant -0.0118962 0.734147 insignificant 1 insignificant 0.867631 0.244318 0.6247969 16 0.72967 0.246999 4.8267e-01 1.7598e-139 1.0000e+00 hypermethylated 1.7598e-136 1.00000000 hypermethylated 8.5390e-36 1.0000000 hypermethylated 8.5390e-33 1.0000 hypermethylated 0.494711 1.9535e-06 hypermethylated 1.3953e-04 hypermethylated 0.868258 0.760035 0.123372 16 0.74661 0.70590 0.0407140 5.5969e-13 9.7259e-01 weaklyHypermeth 5.5969e-11 1.0000e+00 weaklyHypermeth 2.2605e-04 9.5746e-01 weaklyHypermeth 1.4128e-02 1.0000000 weaklyHypermeth 0.0487566 2.4912e-01 insignificant 1.0000e+00 insignificant 0.874738 0.244625 0.635820 18 0.69945 0.26552 0.433936 1.4829e-111 9.9972e-01 hypermethylated 1.4829e-108 1.000000 hypermethylated 5.6404e-33 1.0000000 hypermethylated 5.6404e-30 1 hypermethylated 0.5066076 1.5608e-07 hypermethylated 1.9511e-05 hypermethylated 0.877049 0.760367 0.1382324 15 0.77300 0.73531 0.0376859 3.5771e-13 7.7384e-01 weaklyHypermeth 8.8996e-11 1.00000000 weaklyHypermeth 2.5401e-06 0.94993838 weaklyHypermeth 4.2336e-04 1.00000 weaklyHypermeth 0.0606528 2.0606e-01 insignificant 1.00000000 insignificant 0.244508 0.760035 -0.4986087 16 0.25876 0.70590 -0.447139 1.0000e+00 1.9401e-38 hypomethylated 1.0000e+00 1.9401e-35 hypomethylated 1.0000e+00 1.9729e-18 hypomethylated 1.00000000 1.9729e-15 hypomethylated -0.4459547 8.1488e-06 hypomethylated 2.0372e-03 hypomethylated chr17 56918542 56919542 143777 TBX4 ENSG00000121075 0.78635 138 3 0.60021 155 5 0.516474 78 3 0.67228 148 5 0.60540 41 5 0.76635 266 5 0.77333 51 4 0.63682 122 5 0.658848 81 5 0.70754 75 5 0.71169 151 5 0.29861 26 2 0.425074 138 4 0.55831 55 3 0.698485 56 3 0.60000 13 1 0.227778 53 2 0.452596 182 5 0.584805 133 5 0.611180 217 5 0.776190 36 3 0.27256 96 4 0.73411 66 5 0.550245 83 5 0.782164 50 3 0.722895 182 5 0.65397 77 5 0.61706 27 2 0.69029 125 5 0.70785 157 5 0.57661 193 5 0.80690 183 5 0.690689 131 5 0.579365 59 3 0.52525 47 3 0.200000 15 2 0.610476 87 5 0.351668 196 5 0.349975 177 5 0.382254 148 4 0.48672 154 5 0.385954 166 3 0.48240 153 5 0.649732 0.610109 0.377813 0.625624 0.433849 0.66082 0.71643 0.503301 0.500570 0.562841 0.621420 0.349009 0.418504 0.461900 0.570966 0.390614 0.168359 0.34064 0.551744 0.57139 0.706960 0.205481 0.64202 0.584081 0.590118 0.680072 0.60665 0.53692 0.584715 0.625777 0.511646 0.765156 0.714865 0.598901 0.596086 0.288321 0.734351 0.5358455 0.163726 0.200803 0.252656 0.11365 0.250249 2 0.555402 0.602353 -0.0600363 5 0.48859 0.69225 -0.203662 0.9394559 0.21852172 insignificant 1 1.00000 insignificant 0.99885 0.058584 insignificant 1 1 insignificant -0.0629634 0.253231 lowCoverage 1 lowCoverage 0.555812 0.568224 0.0092082 5 0.63175 0.531341 1.0041e-01 2.9653e-05 3.6737e-03 weaklyHypermeth 7.6034e-04 0.40818524 weaklyHypermeth 2.9488e-02 0.1848193 weaklyHypermeth 5.5638e-01 1.0000 insignificant 0.101699 2.5319e-01 lowCoverage 1.0000e+00 lowCoverage 0.556630 0.175439 0.316083 5 0.69312 0.51299 0.1801334 5.4742e-11 9.6835e-01 hypermethylated 4.1702e-09 1.0000e+00 hypermethylated 2.0580e-06 9.9538e-01 hypermethylated 2.5725e-04 1.0000000 hypermethylated 0.1771473 8.8140e-04 lowCoverage 5.5087e-02 lowCoverage 0.602210 0.568224 0.046574 5 0.65761 0.53134 0.126264 4.2027e-04 1.9518e-01 weaklyHypermeth 1.0007e-02 1.000000 weaklyHypermeth 2.7118e-02 0.6187556 weaklyHypermeth 5.3172e-01 1 insignificant 0.1646621 8.9581e-02 lowCoverage 1.0000e+00 lowCoverage 0.602210 0.174404 0.3766566 5 0.65761 0.41559 0.2420187 7.4975e-10 8.7056e-01 hypermethylated 7.4975e-08 1.00000000 hypermethylated 6.1720e-06 0.97616048 hypermethylated 7.7149e-04 1.00000 hypermethylated 0.2401107 2.6632e-04 lowCoverage 0.02663241 lowCoverage 0.568224 0.174404 0.3027367 5 0.53134 0.41559 0.115754 3.7542e-06 1.8568e-01 hypermethylated 9.3856e-04 1.0000e+00 hypermethylated 2.8342e-03 5.8590e-01 weaklyHypermeth 0.40489084 1.0000e+00 insignificant 0.0754487 3.7879e-01 lowCoverage 1.0000e+00 lowCoverage chr17 57379985 57380985 143819 INTS2 ENSG00000108506 0.85756 124 7 0.76883 93 4 0.582611 127 4 0.88557 137 6 0.92222 21 2 0.82081 242 7 0.86061 48 2 0.20370 46 2 0.566890 44 2 0.92778 54 2 0.66206 86 2 0.93333 25 2 0.818543 70 2 NA 0 0 0.447475 41 2 0.68483 30 2 0.635417 50 2 0.729360 126 7 0.749949 119 6 0.771276 194 7 0.497222 17 2 0.60000 5 0 0.74905 104 7 0.322222 27 2 1.000000 21 4 0.759158 69 5 0.61765 34 2 0.86667 16 2 0.77083 47 2 0.80394 109 6 0.69517 91 5 0.81336 268 7 0.804106 108 4 0.593651 40 4 0.51537 136 6 0.800000 26 3 0.905983 31 2 0.839674 71 6 0.807943 164 7 0.840485 135 7 0.86981 175 7 0.753676 142 7 0.90102 124 7 0.855827 0.599509 0.552379 0.855176 0.770270 0.88909 0.53759 0.540541 0.621486 0.809910 0.711037 0.729730 0.723825 NA 0.693366 0.528933 0.454392 0.66435 0.801340 0.85826 0.563063 0.800252 0.69060 0.707931 0.827279 0.850386 0.64988 0.79585 0.804054 0.737943 0.815247 0.767209 0.931283 0.538224 0.785353 0.875454 0.896759 0.8777321 0.831202 0.904729 0.906452 0.88557 0.890605 0 0.738223 0.771040 -0.0213286 6 0.75403 0.77088 -0.016848 0.8619692 0.43666736 insignificant 1 1.00000 insignificant 0.41388 0.542509 insignificant 1 1 insignificant 0.0198933 0.768536 lowCoverage 1 lowCoverage 0.738223 0.730583 0.0076754 6 0.75403 0.723889 3.0140e-02 2.8596e-02 3.0519e-01 weaklyHypermeth 3.8128e-01 1.00000000 insignificant 1.5347e-01 0.2454929 insignificant 1.0000e+00 1.0000 insignificant -0.015298 8.4345e-01 lowCoverage 1.0000e+00 lowCoverage 0.738223 0.859459 -0.121238 7 0.75403 0.84388 -0.0898461 9.8676e-01 2.9712e-03 weaklyHypometh 1.0000e+00 3.7140e-01 insignificant 6.8855e-01 6.8573e-03 weaklyHypometh 1.0000e+00 0.8816118 insignificant -0.1067541 4.2608e-02 lowCoverage 8.5216e-01 lowCoverage 0.771040 0.730583 0.063295 6 0.77088 0.72389 0.046989 7.5045e-02 2.3326e-01 insignificant 9.6211e-01 1.000000 insignificant 7.2246e-01 0.5399329 insignificant 1.0000e+00 1 insignificant -0.0351915 6.7205e-01 lowCoverage 1.0000e+00 lowCoverage 0.771040 0.859459 -0.0649626 6 0.77088 0.84388 -0.0729979 9.9368e-01 1.5394e-03 weaklyHypometh 1.0000e+00 0.51313610 insignificant 9.8967e-01 0.04229583 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.1266474 4.4385e-02 lowCoverage 1.00000000 lowCoverage 0.730583 0.859459 -0.1143611 6 0.72389 0.84388 -0.119987 9.9183e-01 1.5990e-02 weaklyHypometh 1.0000e+00 3.6340e-01 insignificant 9.6990e-01 1.1891e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0914560 2.1979e-01 lowCoverage 1.0000e+00 lowCoverage chr17 58181113 58182113 143856 ENSG00000199697 0.79703 333 12 0.74103 334 12 0.782228 243 12 0.84123 208 7 0.79678 116 12 0.84769 463 12 0.76868 153 12 0.83109 296 12 0.729563 224 10 0.95220 247 10 0.80252 384 12 0.78470 118 10 0.924796 377 10 0.95293 134 5 0.798247 243 10 0.74074 79 10 0.925000 48 6 0.838197 231 11 0.810596 384 12 0.654588 325 12 0.616349 65 7 0.70089 53 5 0.83423 211 12 0.698124 142 11 0.823054 97 7 0.777558 482 12 0.71734 169 11 0.65493 97 9 0.84369 268 10 0.86418 562 12 0.88959 740 12 0.85805 316 10 0.878917 316 12 0.894199 175 12 1.00000 206 5 0.786364 82 3 0.764880 156 12 0.776313 376 12 0.756953 246 12 0.846275 174 12 0.81681 138 7 0.780334 166 12 0.83159 212 12 0.876857 0.803555 0.827525 0.908654 0.828217 0.90981 0.83872 0.891396 0.801441 0.927602 0.827824 0.827033 0.897102 0.912462 0.833562 0.747878 0.899753 0.91572 0.882036 0.85497 0.773697 0.856877 0.87594 0.795733 0.909895 0.886785 0.86027 0.87331 0.909070 0.929011 0.928079 0.901896 0.898227 0.872068 0.924254 0.891256 0.857915 0.8990806 0.845635 0.931156 0.903016 0.89718 0.938633 5 0.848117 0.885795 -0.0392951 12 0.77473 0.85073 -0.076002 0.9999796 0.00088194 weaklyHypometh 1 0.43022 insignificant 0.97724 0.093116 insignificant 1 1 insignificant 0.0428263 0.191097 insignificant 1 insignificant 0.848258 0.861832 -0.0478537 12 0.79762 0.852477 -5.4854e-02 9.9979e-01 2.4114e-03 weaklyHypometh 1.0000e+00 0.30142826 insignificant 9.9582e-01 0.0792811 insignificant 1.0000e+00 1.0000 insignificant -0.034120 4.3422e-01 insignificant 1.0000e+00 insignificant 0.848258 0.803419 -0.020845 12 0.79762 0.80115 -0.0035232 5.6772e-01 1.8976e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.7341e-01 4.9254e-03 weaklyHypometh 1.0000e+00 0.8816118 insignificant 0.0095999 6.9426e-01 insignificant 1.0000e+00 insignificant 0.884651 0.861175 -0.010527 12 0.77381 0.78690 -0.013094 9.6083e-01 5.5691e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8214e-01 0.5111511 insignificant 1.0000e+00 1 insignificant -0.0769462 1.2397e-01 insignificant 1.0000e+00 insignificant 0.885759 0.803419 0.0247896 12 0.83829 0.80115 0.0371459 1.2455e-01 5.5713e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.7921e-01 0.09363872 insignificant 1.0000e+00 1.00000 insignificant -0.0332264 3.0434e-01 insignificant 1.00000000 insignificant 0.861832 0.803419 0.0572332 12 0.85248 0.80115 0.051331 1.3827e-01 8.2693e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7456e-01 5.4320e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0437198 3.2156e-01 insignificant 1.0000e+00 insignificant chr17 59420070 59421070 143922 SCN4A ENSG00000007314 0.68171 786 18 0.42583 725 19 0.634863 602 17 0.60382 681 19 0.57832 400 18 0.67143 1190 19 0.49627 562 18 0.59109 560 19 0.485812 568 19 0.63854 651 19 0.65122 646 19 0.54295 266 13 0.251325 734 19 0.64012 257 11 0.465391 721 19 0.55202 221 13 0.561150 273 11 0.559339 1109 19 0.540422 1149 19 0.502720 811 19 0.649198 274 16 0.56042 529 17 0.67762 401 17 0.735436 255 14 0.615635 809 18 0.629612 828 19 0.46875 529 16 0.57791 333 14 0.60826 754 17 0.39825 1027 19 0.45972 1307 19 0.62164 870 18 0.405235 520 19 0.368544 603 15 0.23530 628 16 0.334209 621 18 0.541028 341 16 0.487639 984 18 0.659051 758 18 0.644666 777 19 0.60174 629 18 0.603251 1030 18 0.60189 761 19 0.604140 0.379245 0.591616 0.544860 0.492123 0.63681 0.45206 0.486959 0.467699 0.618157 0.593706 0.529828 0.217209 0.560316 0.409381 0.449411 0.448957 0.49734 0.402439 0.43661 0.580513 0.492550 0.62730 0.650957 0.563560 0.574752 0.48428 0.53736 0.529461 0.347886 0.350685 0.675829 0.305758 0.283970 0.235555 0.226109 0.477570 0.3320191 0.608301 0.552431 0.539088 0.50782 0.540453 13 0.468253 0.498736 -0.0231996 19 0.54544 0.50644 0.038993 0.9972172 0.02564326 weaklyHypometh 1 1.00000 insignificant 0.99623 0.032688 weaklyHypometh 1 1 insignificant -0.0298200 0.416335 insignificant 1 insignificant 0.467968 0.294102 0.1955465 19 0.49493 0.449992 4.4939e-02 4.4040e-21 8.9120e-01 weaklyHypermeth 4.4040e-19 1.00000000 weaklyHypermeth 1.9148e-10 0.9983392 weaklyHypermeth 3.8295e-08 1.0000 weaklyHypermeth 0.158392 1.3889e-02 weaklyHypermeth 3.8582e-01 insignificant 0.468229 0.552971 -0.058080 18 0.55500 0.61757 -0.0625647 9.4612e-01 4.1970e-07 weaklyHypometh 1.0000e+00 2.0985e-04 weaklyHypometh 9.8187e-01 7.0031e-06 weaklyHypometh 1.0000e+00 0.0044051 weaklyHypometh -0.0684023 1.3937e-02 weaklyHypometh 3.8715e-01 insignificant 0.498926 0.293799 0.219829 19 0.54992 0.41159 0.138335 5.3888e-19 1.0000e+00 hypermethylated 8.9813e-17 1.000000 hypermethylated 4.6328e-12 0.9999991 hypermethylated 1.1582e-09 1 hypermethylated 0.1882118 5.9760e-03 weaklyHypermeth 2.2133e-01 insignificant 0.499493 0.552971 -0.0312902 18 0.58675 0.61757 -0.0308193 2.8279e-01 1.8757e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 6.5823e-01 0.14001168 insignificant 1.0000e+00 1.00000 insignificant -0.0385824 2.3019e-01 insignificant 1.00000000 insignificant 0.293464 0.552971 -0.2454131 18 0.37543 0.61757 -0.242137 9.9942e-01 6.6870e-25 hypomethylated 1.0000e+00 1.6718e-22 hypomethylated 9.9999e-01 3.7577e-11 hypomethylated 1.00000000 9.3942e-09 hypomethylated -0.2267942 3.0749e-03 weaklyHypometh 1.1389e-01 insignificant chr17 60138858 60139858 143941 SMURF2 ENSG00000108854 0.84599 262 5 0.76741 375 6 0.636483 101 6 0.80526 280 5 0.61861 81 6 0.84911 559 6 0.83357 146 6 0.70104 152 6 0.719412 108 6 0.77627 79 5 0.83705 274 6 0.54583 38 3 0.706613 179 5 0.74869 104 5 0.740325 114 5 0.80678 44 3 0.583333 9 1 0.539908 279 5 0.816015 371 6 0.739108 308 5 0.687560 49 3 0.78661 89 2 0.85149 143 6 0.650021 104 5 0.643643 268 6 0.694288 314 6 0.72096 80 6 0.65089 44 4 0.77727 264 5 0.59840 412 6 0.81260 621 6 0.75152 246 5 0.520096 264 6 0.623135 186 6 0.58938 299 6 0.265801 91 5 0.654427 166 6 0.261555 379 6 0.791597 238 6 0.810049 233 5 0.75243 265 5 0.641024 177 5 0.77312 240 6 0.864931 0.779765 0.656312 0.817004 0.660226 0.83758 0.82243 0.840709 0.735668 0.825074 0.849280 0.545339 0.769486 0.819828 0.758040 0.711031 0.711092 0.68453 0.856415 0.82009 0.739567 0.769298 0.86478 0.681741 0.710692 0.765289 0.73696 0.66788 0.787531 0.820962 0.834306 0.880530 0.575858 0.673140 0.582271 0.345352 0.706201 0.3329217 0.767384 0.795940 0.775296 0.65744 0.779561 2 0.775130 0.779043 0.0023761 6 0.72437 0.60426 0.120108 0.8234105 0.28673610 insignificant 1 1.00000 insignificant 0.55906 0.682699 insignificant 1 1 insignificant 0.0120707 0.705104 insignificant 1 insignificant 0.775728 0.545848 0.2793271 6 0.77822 0.488957 2.8926e-01 7.9446e-16 1.0000e+00 hypermethylated 5.6747e-14 1.00000000 hypermethylated 2.5229e-06 0.9552106 hypermethylated 1.5768e-04 1.0000 hypermethylated 0.245109 1.8035e-02 weaklyHypermeth 4.8744e-01 insignificant 0.775674 0.732003 0.058992 5 0.78366 0.81603 -0.0323623 3.7087e-02 3.6812e-01 weaklyHypermeth 8.2415e-01 1.0000e+00 insignificant 2.9765e-01 5.2178e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0228017 5.5390e-01 insignificant 1.0000e+00 insignificant 0.780571 0.545848 0.277293 6 0.78139 0.48896 0.292432 3.5449e-12 1.0000e+00 hypermethylated 2.3633e-10 1.000000 hypermethylated 1.2466e-05 0.9575724 hypermethylated 1.0389e-03 1 hypermethylated 0.2330384 2.2078e-02 weaklyHypermeth 6.1968e-01 insignificant 0.779848 0.732003 0.0549766 5 0.64854 0.81603 -0.1674843 2.8627e-01 8.1782e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.5905e-01 0.68413334 insignificant 1.0000e+00 1.00000 insignificant -0.0348724 3.7427e-01 insignificant 1.00000000 insignificant 0.545848 0.731538 -0.1958653 5 0.48896 0.75470 -0.265744 9.9988e-01 3.2303e-05 weaklyHypometh 1.0000e+00 1.6151e-03 weaklyHypometh 8.9334e-01 2.2033e-03 weaklyHypometh 1.00000000 9.5798e-02 weaklyHypometh -0.2679107 1.2273e-02 weaklyHypometh 3.3169e-01 insignificant chr17 61556500 61557500 144029 CCDC46 ENSG00000154240 0.77760 161 5 0.61833 54 5 0.647879 96 5 0.580303 71 5 0.6891209 40 3 0.74699 172 5 0.596456 72 5 0.641758 65 5 0.582512 72 5 0.716503 47 5 0.695338 158 5 0.658480 66 5 0.696667 86 5 NA 0 0 0.694286 63 5 0.871111 49 5 0.6155556 80 5 0.708333 64 5 0.798030 75 5 0.745462 122 5 0.763492 29 3 0.711659 47 5 0.651515 57 5 0.886429 34 3 0.9200000 19 3 0.774824 117 5 0.723810 33 5 0.7946753 40 4 0.660000 48 5 0.733198 139 5 0.824880 105 5 0.73956 172 5 0.5603996 64 5 0.6925000 86 5 0.56919117 157 5 0.5666667 48 2 0.628175 35 4 0.6879461 124 5 0.655920 119 5 0.842083 112 5 0.6711111 89 5 0.60767 106 5 0.755458 70 5 0.794109 0.646954 0.663762 0.617241 0.702690 0.761831 0.619137 0.656233 0.5984794 0.735592 0.71140 0.678169 0.712069 NA 0.7128079 0.881456 0.621379 0.729433 0.8138125 0.756532 0.757417 0.730284 0.670846 0.887241 0.926897 0.789146 0.739573 0.810519 0.699310 0.753306 0.841511 0.759390 0.5876027 0.7047701 0.5628784 0.56819923 0.660591 0.703123 0.678446 0.857816 0.689272 0.6413793 0.764886 4 0.69932 0.760714 -0.06072099 5 0.694575 0.751320 -0.05674463 0.99717167 0.0029260 weaklyHypometh 1.00000 1 insignificant 9.9999e-01 0.00070947 weaklyHypometh 1.000000 0.29969 insignificant -0.07687814 0.0159869 lowCoverage 1.00000 lowCoverage 0.699318 0.622568 0.0712660 5 0.694575 0.623399 0.0711763 7.0764e-03 9.7598e-01 weaklyHypermeth 8.7363e-02 1.0000e+00 weaklyHypermeth 1.1216e-02 9.8208e-01 weaklyHypermeth 1.8387e-01 1.0000e+00 insignificant 0.0709786 4.2300e-02 lowCoverage 6.6093e-01 lowCoverage 0.699318 0.719758 -0.01412457 5 0.69457 0.70568 -0.0111060 8.1454e-01 2.1966e-01 insignificant 1.0000e+00 1.000000 insignificant 8.4759e-01 3.1907e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01799000 7.0475e-01 lowCoverage 1.000000 lowCoverage 0.760714 0.622568 0.142824 5 0.75132 0.623399 0.127921 3.1718e-05 9.9796e-01 weaklyHypermeth 6.6079e-04 1.0000e+00 weaklyHypermeth 4.4263e-05 1.0000e+00 weaklyHypermeth 1.4754e-03 1.0000e+00 weaklyHypermeth 0.1478568 8.5896e-04 lowCoverage 3.4358e-02 lowCoverage 0.760714 0.719758 5.0743e-02 5 0.751320 0.70568 0.04563866 1.1224e-01 9.3204e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.4114e-01 9.9140e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0588881 2.5813e-01 lowCoverage 1.000000 lowCoverage 0.622568 0.719758 -0.0838870 5 0.623399 0.70568 -0.0822823 9.5370e-01 2.4281e-02 weaklyHypometh 1.0000e+00 3.8865e-01 insignificant 9.8333e-01 5.4721e-02 insignificant 1.0000e+00 9.4347e-01 insignificant -0.08896863 1.1053e-01 lowCoverage 1.0000000 lowCoverage chr17 61824974 61825974 144035 ENSG00000211174,ENSG00000222163 0.86898 106 6 0.90880 61 6 0.800000 84 6 0.890765 159 6 0.5856481 46 5 0.76151 227 6 0.788095 62 6 0.621429 125 6 0.827613 115 6 0.661266 160 6 0.563527 132 6 0.646972 101 6 0.677531 185 6 0.78472 47 6 0.852739 162 6 0.500000 12 0 0.5327381 44 5 0.826374 133 6 0.499012 155 6 0.785353 139 6 0.552970 53 6 0.792131 84 6 0.624339 77 6 0.691667 69 6 0.7910053 52 6 0.771923 147 6 0.725535 120 6 0.7440476 42 6 0.678530 65 6 0.867424 86 6 0.841082 153 6 0.89172 219 6 0.5449134 129 6 0.4090909 59 6 0.16666667 7 0 0.7440476 45 6 0.638971 87 6 0.7992063 93 6 0.860064 136 6 0.896825 62 6 0.7317426 96 6 0.97162 82 6 0.945578 84 6 0.864027 0.911702 0.795491 0.886245 0.575751 0.754707 0.782264 0.612836 0.8236770 0.653955 0.55402 0.644018 0.672992 0.7844203 0.8497895 0.485507 0.519324 0.825753 0.4867276 0.776953 0.549330 0.783868 0.616057 0.682367 0.782609 0.765533 0.720906 0.736312 0.674169 0.865942 0.834897 0.889857 0.5472897 0.4077734 0.1449275 0.74939614 0.632567 0.794893 0.856478 0.898551 0.725284 0.9727998 0.943212 6 0.72860 0.796915 -0.05439392 6 0.718948 0.775252 -0.05630367 0.97927795 0.0141849 weaklyHypometh 1.00000 1 insignificant 6.8286e-01 0.16302165 insignificant 1.000000 1.00000 insignificant -0.02854380 0.4989266 insignificant 1.00000 insignificant 0.728603 0.616667 0.0997496 6 0.718948 0.611593 0.1073554 8.3208e-04 9.4351e-01 weaklyHypermeth 1.2607e-02 1.0000e+00 weaklyHypermeth 5.3881e-03 9.3355e-01 weaklyHypermeth 1.0036e-01 1.0000e+00 insignificant 0.1686711 1.4336e-01 insignificant 1.0000e+00 insignificant 0.728603 0.897826 -0.13215347 6 0.71895 0.88384 -0.1648960 9.9863e-01 2.7233e-04 weaklyHypometh 1.0000e+00 0.090778 weaklyHypometh 9.8724e-01 7.8179e-04 weaklyHypometh 1.0000e+00 0.195448 insignificant -0.16201199 1.2613e-02 weaklyHypometh 0.360362 insignificant 0.796915 0.616667 0.154472 6 0.77525 0.611593 0.163659 3.5873e-05 9.9838e-01 weaklyHypermeth 7.1745e-04 1.0000e+00 weaklyHypermeth 1.2074e-02 9.2300e-01 weaklyHypermeth 1.9474e-01 1.0000e+00 insignificant 0.1972149 9.6405e-02 insignificant 1.0000e+00 insignificant 0.796915 0.897826 -8.1617e-02 6 0.775252 0.88384 -0.10859231 9.7054e-01 1.8259e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8193e-01 4.3578e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.1334682 3.0730e-02 weaklyHypometh 0.889651 insignificant 0.616667 0.897826 -0.2543279 6 0.611593 0.88384 -0.2722514 9.9958e-01 8.2586e-06 hypomethylated 1.0000e+00 3.0588e-04 hypomethylated 9.9501e-01 1.6185e-04 hypomethylated 1.0000e+00 7.3566e-03 hypomethylated -0.33068306 1.6437e-02 weaklyHypometh 0.4008936 insignificant chr17 61937398 61938398 144038 ENSG00000211174,ENSG00000222163 0.92863 199 5 0.79530 92 5 0.856703 71 5 0.827778 52 4 0.9333333 36 2 0.87699 141 5 0.867836 65 5 0.875152 62 5 0.863203 68 5 0.811111 28 2 0.861905 109 5 0.895000 43 5 0.917857 52 5 NA 0 0 1.000000 46 5 0.898095 28 5 0.8473650 81 5 0.917778 48 5 0.960000 120 5 0.755192 132 5 0.613333 31 3 0.733333 20 2 0.842455 92 5 0.732073 79 5 0.9400000 40 5 0.835198 115 5 0.907582 99 5 0.8111111 40 5 0.904813 76 5 0.910230 157 5 0.950613 244 5 0.87944 284 5 0.9694737 52 4 0.9888889 55 5 0.62500000 52 2 0.9600000 42 5 0.905556 59 5 0.9284999 172 5 0.950400 156 5 0.959160 119 5 0.9078782 80 5 0.98022 146 5 0.909167 68 5 0.934536 0.820602 0.859516 0.848574 0.932891 0.882991 0.877555 0.886787 0.8637034 0.822026 0.87408 0.921239 0.926201 NA 1.0000000 0.900716 0.856617 0.926450 0.9641593 0.795917 0.675811 0.787611 0.862542 0.731192 0.932743 0.860852 0.917953 0.836775 0.906580 0.913968 0.954695 0.883937 0.9621798 0.9862340 0.7204344 0.96283186 0.925270 0.937124 0.951420 0.957210 0.918183 0.9836331 0.907817 2 0.90020 0.896633 0.01164037 5 0.882272 0.870434 0.01183772 0.30685225 0.7466891 insignificant 1.00000 1 insignificant 1.5874e-01 0.88040910 insignificant 1.000000 1.00000 insignificant 0.04003160 0.2316560 lowCoverage 1.00000 lowCoverage 0.900204 0.953704 -0.0393427 5 0.882272 0.928699 -0.0464274 9.9633e-01 2.8432e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9805e-01 2.7497e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0178562 7.6620e-01 lowCoverage 1.0000e+00 lowCoverage 0.900204 0.950791 -0.05301114 5 0.88227 0.94840 -0.0661275 9.9847e-01 6.9895e-03 weaklyHypometh 1.0000e+00 0.776609 insignificant 9.9194e-01 1.4058e-02 weaklyHypometh 1.0000e+00 0.937224 insignificant -0.06298368 7.3497e-03 lowCoverage 0.278074 lowCoverage 0.896633 0.953704 -0.049656 5 0.87043 0.928699 -0.058265 9.8164e-01 2.5738e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9822e-01 7.4859e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0578878 3.8405e-01 lowCoverage 1.0000e+00 lowCoverage 0.896633 0.950791 -6.2914e-02 5 0.870434 0.94840 -0.07796520 9.9973e-01 5.0804e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9967e-01 2.2704e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.1030153 6.5514e-03 lowCoverage 0.302896 lowCoverage 0.953704 0.950791 -0.0030022 5 0.928699 0.94840 -0.0197001 7.1984e-01 4.4478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4440e-01 8.5328e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04512749 4.6337e-01 lowCoverage 1.0000000 lowCoverage chr17 62386092 62387092 144050 CACNG5 ENSG00000075429 0.87376 338 8 0.81511 186 8 0.779592 223 8 0.855554 422 8 0.8860067 136 8 0.88341 501 8 0.850491 197 8 0.845813 189 8 0.874419 281 8 0.855948 168 8 0.864678 253 8 0.900369 142 7 0.785068 192 8 0.86111 61 4 0.827129 150 8 0.932463 93 7 0.8195061 170 8 0.874213 448 8 0.896743 206 8 0.821074 342 8 0.680211 106 7 0.661262 124 7 0.842680 240 8 0.773532 79 6 0.9081731 96 7 0.904301 239 8 0.770201 98 5 0.8296296 66 5 0.883355 161 8 0.914129 258 8 0.854796 411 8 0.87248 598 8 0.5792980 214 8 0.7007029 113 7 0.51978355 283 4 0.7500000 62 6 0.635807 115 8 0.6362129 244 8 0.713799 394 8 0.750647 382 8 0.6831461 330 8 0.71624 449 8 0.828405 400 8 0.872934 0.829155 0.813382 0.830329 0.897571 0.893695 0.854318 0.846179 0.8632736 0.880274 0.85834 0.905320 0.870680 0.8519774 0.8192751 0.916261 0.813045 0.891188 0.8802426 0.793081 0.808035 0.752704 0.852827 0.808851 0.886968 0.883397 0.821618 0.931373 0.867774 0.905662 0.845053 0.885401 0.6173061 0.7217269 0.4919975 0.73088235 0.730282 0.700855 0.689645 0.773175 0.580235 0.7684590 0.853367 5 0.85124 0.864701 -0.01299381 8 0.820948 0.883531 -0.06258324 0.86201021 0.2408972 insignificant 1.00000 1 insignificant 8.1172e-01 0.39444117 insignificant 1.000000 1.00000 insignificant 0.03056099 0.2650009 insignificant 1.00000 insignificant 0.851386 0.613967 0.2399542 8 0.861066 0.595013 0.2660525 8.9199e-27 9.8299e-01 hypermethylated 5.5749e-25 1.0000e+00 hypermethylated 1.8467e-06 9.9894e-01 hypermethylated 7.3870e-05 1.0000e+00 hypermethylated 0.2181556 9.3497e-04 hypermethylated 3.7399e-02 hypermethylated 0.851576 0.745008 0.11284073 8 0.87650 0.75560 0.1209060 9.6890e-11 1.0000e+00 weaklyHypermeth 8.0742e-09 1.000000 weaklyHypermeth 1.6010e-06 1.0000e+00 weaklyHypermeth 1.4555e-04 1.000000 weaklyHypermeth 0.11667538 6.8361e-03 weaklyHypermeth 0.273444 insignificant 0.864537 0.613967 0.254112 8 0.86897 0.595013 0.273959 4.8138e-16 9.9571e-01 hypermethylated 2.5336e-14 1.0000e+00 hypermethylated 3.8427e-05 9.9473e-01 hypermethylated 1.3724e-03 1.0000e+00 hypermethylated 0.1875946 1.0250e-03 weaklyHypermeth 3.8261e-02 weaklyHypermeth 0.864537 0.744997 1.2591e-01 8 0.868972 0.75630 0.11267535 1.3658e-07 1.0000e+00 weaklyHypermeth 1.3658e-05 1.00000000 weaklyHypermeth 4.5999e-04 9.9989e-01 weaklyHypermeth 3.0666e-02 1.000000 weaklyHypermeth 0.0861144 3.1138e-02 weaklyHypermeth 0.889651 insignificant 0.613967 0.744997 -0.1285081 8 0.595013 0.75630 -0.1612833 9.4647e-01 2.6798e-04 weaklyHypometh 1.0000e+00 7.6567e-03 weaklyHypometh 7.7897e-01 2.5855e-02 weaklyHypometh 1.0000e+00 5.5119e-01 insignificant -0.10148022 3.9085e-02 weaklyHypometh 0.7816938 insignificant chr17 62386771 62387771 144051 CACNG5 ENSG00000075429 0.84257 165 5 0.74141 111 5 0.659440 94 5 0.804738 258 5 0.7800000 67 5 0.74957 208 4 0.775071 85 5 0.827415 77 5 0.731190 132 3 0.755758 70 5 0.835328 140 5 0.730590 70 3 0.842934 101 5 0.73333 56 3 0.710000 55 5 0.817949 42 3 0.8938462 48 3 0.713987 252 5 0.917832 90 5 0.743504 159 5 0.537619 22 2 0.580303 28 2 0.816706 94 5 0.726667 18 1 0.9400000 31 4 0.887471 135 5 0.750000 6 0 0.6333333 11 0 0.775726 69 5 0.835394 146 5 0.800468 189 5 0.78251 234 5 0.5437548 111 5 0.5636364 51 5 0.69230769 26 2 0.7200000 20 3 0.350794 46 5 0.5713559 127 5 0.806601 200 5 0.697268 197 5 0.8135807 207 5 0.68911 278 5 0.780321 194 5 0.840762 0.751555 0.648310 0.833092 0.798148 0.806920 0.779237 0.817224 0.7564188 0.757155 0.84365 0.768874 0.848844 0.7706019 0.7625000 0.843394 0.885363 0.732029 0.9236597 0.766807 0.492890 0.660880 0.817691 0.708333 0.941667 0.911853 0.650179 0.759259 0.828763 0.855948 0.809444 0.798045 0.6004335 0.5220960 0.6229604 0.68055556 0.437390 0.628067 0.762831 0.683687 0.784357 0.6543530 0.766623 0 0.82105 0.820956 -0.01252265 5 0.790336 0.805590 -0.01525420 0.87271037 0.3805977 insignificant 1.00000 1 insignificant 7.3534e-01 0.21149399 insignificant 1.000000 1.00000 insignificant 0.02480641 0.5201507 lowCoverage 1.00000 lowCoverage 0.821053 0.556430 0.2362213 5 0.790336 0.544897 0.2454388 3.1616e-16 1.0000e+00 hypermethylated 1.2646e-14 1.0000e+00 hypermethylated 8.4099e-05 9.9871e-01 hypermethylated 2.4735e-03 1.0000e+00 hypermethylated 0.2066819 1.0576e-02 lowCoverage 2.4036e-01 lowCoverage 0.821053 0.753717 0.07504765 5 0.79034 0.75871 0.0316246 4.6806e-05 4.0214e-01 weaklyHypermeth 1.9503e-03 1.000000 weaklyHypermeth 5.9111e-03 3.2862e-01 weaklyHypermeth 2.2006e-01 1.000000 insignificant 0.02294624 4.7889e-01 lowCoverage 1.000000 lowCoverage 0.820956 0.556430 0.252649 5 0.80559 0.544897 0.260693 4.0753e-09 1.0000e+00 hypermethylated 1.2735e-07 1.0000e+00 hypermethylated 7.4871e-04 9.9758e-01 hypermethylated 1.7412e-02 1.0000e+00 hypermethylated 0.1818755 1.8470e-02 lowCoverage 3.7695e-01 lowCoverage 0.820956 0.753717 7.7219e-02 5 0.805590 0.75871 0.04687882 1.5943e-02 7.3030e-01 weaklyHypermeth 3.3921e-01 1.00000000 insignificant 2.2505e-01 7.8493e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0018602 9.6674e-01 lowCoverage 1.000000 lowCoverage 0.556430 0.753717 -0.1908155 5 0.544897 0.75871 -0.2138142 9.9932e-01 3.4469e-05 weaklyHypometh 1.0000e+00 1.1490e-03 weaklyHypometh 9.9844e-01 2.6739e-03 weaklyHypometh 1.0000e+00 8.1028e-02 weaklyHypometh -0.18373564 1.7402e-02 lowCoverage 0.4143312 lowCoverage chr17 63427134 63428134 144081 C17orf58 ENSG00000186665 0.62874 168 5 0.69727 156 5 0.761506 87 5 0.638158 140 5 0.8055556 63 5 0.74784 281 5 0.693776 67 6 0.847826 108 5 0.759477 67 5 0.808838 80 5 0.885948 177 5 0.745455 31 2 0.934173 110 5 0.82940 75 5 0.774603 59 5 0.733333 15 0 0.9285714 14 2 0.739094 169 5 0.682684 97 5 0.654916 173 5 1.000000 26 2 0.544923 54 2 0.694937 92 5 0.776190 65 4 0.8857143 34 2 0.856703 181 5 0.862500 51 3 0.7777778 22 2 0.820513 69 5 0.816066 143 5 0.600683 181 5 0.75224 163 5 0.6073254 133 5 0.7568161 82 5 0.59880952 64 3 0.6500000 12 0 0.676068 61 5 0.7205744 157 5 0.777015 162 5 0.805796 199 5 0.8095884 158 5 0.80543 126 5 0.777167 153 5 0.922393 0.844568 0.763337 0.936148 0.947531 0.915548 0.910852 0.958535 0.8719862 0.903047 0.97231 0.833053 0.956324 0.8953246 0.9597296 0.555556 0.898211 0.922411 0.7791072 0.903910 1.000000 0.824847 0.848055 0.953086 0.938427 0.953816 0.823844 0.949440 0.961538 0.888988 0.901825 0.865101 0.6094609 0.8376154 0.6484821 0.62595780 0.782669 0.561788 0.913478 0.908377 0.954304 0.9001982 0.900363 2 0.79457 0.803885 -0.00235318 5 0.754693 0.767083 -0.01239064 0.71515423 0.3979483 insignificant 1.00000 1 insignificant 9.3870e-01 0.19068647 insignificant 1.000000 1.00000 insignificant -0.01749658 0.6752921 lowCoverage 1.00000 lowCoverage 0.794572 0.632613 0.1196193 5 0.754693 0.697550 0.0571433 5.4346e-07 8.3562e-01 weaklyHypermeth 1.1322e-05 1.0000e+00 weaklyHypermeth 5.6924e-03 9.0386e-01 weaklyHypermeth 1.0350e-01 1.0000e+00 insignificant 0.0965922 1.1544e-02 lowCoverage 2.5654e-01 lowCoverage 0.794572 0.764411 -0.00076066 5 0.75469 0.83383 -0.0791357 8.3867e-01 3.8279e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8820e-01 2.9652e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03014174 1.6878e-01 lowCoverage 1.000000 lowCoverage 0.803885 0.632613 0.136190 5 0.76708 0.697550 0.069534 3.2496e-05 9.1987e-01 weaklyHypermeth 6.6318e-04 1.0000e+00 weaklyHypermeth 1.4180e-03 9.4342e-01 weaklyHypermeth 3.0171e-02 1.0000e+00 weaklyHypermeth 0.1140888 1.9824e-02 lowCoverage 3.8614e-01 lowCoverage 0.803885 0.764411 9.9383e-05 5 0.767083 0.83383 -0.06674503 7.2416e-01 3.6531e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.2390e-01 7.0560e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0126452 7.3639e-01 lowCoverage 1.000000 lowCoverage 0.632613 0.764411 -0.1173687 5 0.697550 0.83383 -0.1362790 9.9572e-01 1.7510e-03 weaklyHypometh 1.0000e+00 4.0721e-02 weaklyHypometh 9.9941e-01 6.5450e-03 weaklyHypometh 1.0000e+00 1.7224e-01 insignificant -0.12673398 3.3482e-03 lowCoverage 0.1183141 lowCoverage chr17 64185921 64186921 144103 FAM20A ENSG00000108950 0.74401 144 5 0.71270 66 4 0.761453 71 5 0.795455 86 5 0.7242424 38 4 0.72591 140 5 0.898901 62 5 0.775673 55 4 0.765614 62 4 0.873203 54 4 0.839456 116 5 0.824841 45 5 0.880303 61 4 NA 0 0 0.847222 69 5 0.784314 59 5 0.8389610 68 5 0.869608 75 5 0.917045 82 5 0.869455 133 5 0.942857 19 2 0.887500 51 4 0.764485 120 5 0.833333 13 2 0.9666667 27 4 0.860352 91 5 0.915152 28 2 0.9116162 25 2 0.839964 81 5 0.873829 130 5 0.788643 64 5 0.76988 213 5 0.7184441 55 4 0.6109091 67 5 0.64971510 91 5 0.8884848 59 5 0.635714 33 2 0.8830808 73 5 0.836755 162 5 0.881703 196 5 0.8261404 111 5 0.86875 190 5 0.875708 143 5 0.747472 0.815660 0.849062 0.787488 0.718838 0.815621 0.961595 0.856828 0.8502803 0.836467 0.88013 0.750258 0.822727 NA 0.9091065 0.814393 0.864239 0.835456 0.9762769 0.849851 0.896907 0.822165 0.784252 0.848811 0.939863 0.844443 0.915651 0.885678 0.894987 0.903286 0.777468 0.829934 0.7308233 0.6359888 0.6865583 0.81686973 0.847202 0.899524 0.879060 0.899897 0.878989 0.9211314 0.916827 2 0.82032 0.828306 -0.00553540 5 0.813411 0.820511 -0.00710072 0.44732568 0.1131048 insignificant 1.00000 1 insignificant 6.9580e-01 0.00798775 weaklyHypometh 1.000000 0.92922 insignificant -0.04978455 0.0501126 lowCoverage 1.00000 lowCoverage 0.820323 0.761905 0.0639693 5 0.813411 0.750934 0.0624765 3.2631e-03 9.8895e-01 weaklyHypermeth 4.2287e-02 1.0000e+00 weaklyHypermeth 2.3613e-02 9.8904e-01 weaklyHypermeth 3.4241e-01 1.0000e+00 insignificant 0.0820136 1.7478e-01 lowCoverage 1.0000e+00 lowCoverage 0.820323 0.855362 -0.04718704 5 0.81341 0.85909 -0.0456762 9.9232e-01 2.0295e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6263e-01 4.6000e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04474001 2.5387e-02 lowCoverage 0.619185 lowCoverage 0.828306 0.761905 0.069029 5 0.82051 0.750934 0.069577 1.5360e-03 9.8972e-01 weaklyHypermeth 2.4000e-02 1.0000e+00 weaklyHypermeth 1.2094e-03 9.9989e-01 weaklyHypermeth 2.6291e-02 1.0000e+00 weaklyHypermeth 0.1317981 4.9238e-02 lowCoverage 7.5751e-01 lowCoverage 0.828306 0.855362 -4.3505e-02 5 0.820511 0.85909 -0.03857553 9.6868e-01 2.7565e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 2.8835e-01 4.0029e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0050445 8.2253e-01 lowCoverage 1.000000 lowCoverage 0.761905 0.855362 -0.1144750 5 0.750934 0.85909 -0.1081527 9.9877e-01 1.0119e-03 weaklyHypometh 1.0000e+00 2.5278e-02 weaklyHypometh 9.9924e-01 2.5594e-03 weaklyHypometh 1.0000e+00 7.9982e-02 weaklyHypometh -0.12675356 5.5415e-02 lowCoverage 0.9895592 lowCoverage chr17 66268559 66269559 144223 KCNJ2 ENSG00000123700 0.55818 51 5 0.61333 53 5 0.436364 55 5 0.607143 37 5 0.5428571 34 5 0.58125 148 5 0.547222 43 5 0.656618 84 5 0.550000 40 5 0.618095 71 5 0.597248 144 5 0.400000 15 0 0.537179 61 5 0.64000 49 5 0.542857 35 5 0.300000 10 0 0.7000000 10 0 0.650000 30 5 0.600000 35 5 0.686842 85 5 0.544286 28 4 0.699192 52 5 0.666667 14 0 0.550000 40 5 0.6555556 45 5 0.600000 80 5 0.720000 21 3 0.5000000 10 0 0.628571 36 5 0.557778 49 5 0.576584 72 5 0.62961 110 5 0.7000000 40 5 0.6083333 42 5 0.54606061 55 5 NA 0 0 0.443636 46 5 0.7206349 39 5 0.530000 24 4 0.400000 20 0 0.4900000 23 3 NA 0 0 0.527855 61 5 0.561111 0.612346 0.432660 0.602513 0.544974 0.580520 0.545010 0.653527 0.5486111 0.615961 0.59528 0.407407 0.532882 0.6370370 0.5423280 0.305556 0.694444 0.648148 0.6005291 0.682586 0.540476 0.697737 0.660494 0.546296 0.653807 0.596065 0.714815 0.500000 0.626984 0.551646 0.575357 0.628384 0.6967593 0.6057099 0.5443883 NA 0.440278 0.715461 0.535185 0.398148 0.487963 NA 0.530897 0 0.59083 0.612208 -0.02344998 5 0.587830 0.611927 -0.02409718 0.74014188 0.2494739 insignificant 1.00000 1 insignificant 7.3283e-01 0.15523923 insignificant 1.000000 1.00000 insignificant -0.04242713 0.1568269 lowCoverage 1.00000 lowCoverage 0.590826 0.603604 -0.0073513 5 0.587830 0.597092 -0.0092618 6.1930e-01 3.3040e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8088e-01 2.9177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0354735 5.4745e-01 lowCoverage 1.0000e+00 lowCoverage 0.590826 0.507812 0.07859199 4 0.58783 0.50641 0.0814199 2.4823e-03 6.0366e-01 lowCoverage 6.5324e-02 1.000000 lowCoverage 1.0779e-02 8.3881e-01 lowCoverage 3.5931e-01 1.000000 lowCoverage 0.08129566 6.8629e-02 lowCoverage 1.000000 lowCoverage 0.612208 0.603604 0.016316 5 0.61193 0.597092 0.014835 3.3439e-01 4.8958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8631e-01 5.1086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0069536 9.0332e-01 lowCoverage 1.0000e+00 lowCoverage 0.612208 0.507812 1.0196e-01 4 0.611927 0.50641 0.10551703 5.9611e-04 7.2959e-01 lowCoverage 2.1290e-02 1.00000000 lowCoverage 1.1949e-02 7.6619e-01 lowCoverage 4.1203e-01 1.000000 lowCoverage 0.1237228 1.5199e-02 lowCoverage 0.524111 lowCoverage 0.603604 0.507812 0.0866177 4 0.597092 0.50641 0.0906817 6.2273e-02 7.4703e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.0223e-02 9.7512e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.11676918 9.4374e-02 lowCoverage 1.0000000 lowCoverage chr17 67886330 67887330 144506 ENSG00000211264 0.80343 305 14 0.66261 447 14 0.789975 217 12 0.881328 271 8 0.7125109 146 12 0.79087 636 14 0.742821 166 14 0.896500 266 14 0.809462 169 12 0.756798 187 12 0.836648 435 14 0.816797 68 6 0.795739 347 12 0.55721 87 4 0.777904 181 12 0.750000 58 4 0.6282361 92 6 0.598243 311 10 0.770894 559 13 0.646497 345 14 0.746315 120 12 0.493614 119 8 0.712037 224 12 0.755806 192 12 0.8595779 68 6 0.763352 549 14 0.613683 175 11 0.8494048 88 6 0.723103 372 10 0.763102 583 14 0.777956 820 14 0.78948 420 14 0.8947992 385 14 0.9323023 252 12 0.88111888 319 8 0.9857143 55 5 0.846256 163 8 0.9372364 554 14 0.344700 344 14 0.386874 315 14 0.4549609 284 10 0.58295 300 10 0.392438 314 12 0.840665 0.744506 0.832527 0.868880 0.764258 0.811057 0.833613 0.901744 0.8867864 0.727220 0.84112 0.766520 0.788107 0.7484468 0.8522671 0.913786 0.641185 0.730986 0.7804167 0.706118 0.809544 0.658687 0.816424 0.806742 0.802789 0.841236 0.697156 0.864415 0.785876 0.845804 0.761004 0.869366 0.9215213 0.9448858 0.9594928 0.95740072 0.916233 0.978071 0.451541 0.462767 0.475779 0.5955955 0.407663 4 0.78103 0.788782 -0.01613398 14 0.757238 0.721415 0.03582324 0.85496617 0.1328082 insignificant 1.00000 1 insignificant 7.4022e-01 0.63983231 insignificant 1.000000 1.00000 insignificant 0.01393745 0.6965952 insignificant 1.00000 insignificant 0.781226 0.928819 -0.1664231 14 0.758273 0.919589 -0.1613160 9.9987e-01 1.6293e-24 weaklyHypometh 1.0000e+00 8.1463e-22 weaklyHypometh 9.9999e-01 2.4709e-13 weaklyHypometh 1.0000e+00 1.2355e-10 weaklyHypometh -0.1616807 3.4634e-05 weaklyHypometh 2.1646e-03 weaklyHypometh 0.781226 0.480411 0.30413624 12 0.75827 0.40722 0.3510558 5.6063e-50 1.0000e+00 hypermethylated 5.6063e-47 1.000000 hypermethylated 4.5375e-21 1.0000e+00 hypermethylated 2.2688e-18 1.000000 hypermethylated 0.31883955 4.3375e-04 hypermethylated 0.036145 hypermethylated 0.789035 0.928819 -0.156800 14 0.77090 0.919589 -0.148685 9.9981e-01 1.2579e-19 weaklyHypometh 1.0000e+00 6.2896e-17 weaklyHypometh 9.9993e-01 8.7173e-12 weaklyHypometh 1.0000e+00 4.3586e-09 weaklyHypometh -0.1756181 1.2859e-04 weaklyHypometh 7.4975e-03 weaklyHypometh 0.789035 0.480411 3.2117e-01 12 0.770903 0.40722 0.36368641 5.0516e-44 1.0000e+00 hypermethylated 5.0516e-41 1.00000000 hypermethylated 1.2543e-19 1.0000e+00 hypermethylated 1.2543e-16 1.000000 hypermethylated 0.3049021 3.0017e-04 hypermethylated 0.034239 hypermethylated 0.928819 0.480411 0.4713990 12 0.919589 0.40722 0.5123718 3.0818e-45 1.0000e+00 hypermethylated 3.0818e-42 1.0000e+00 hypermethylated 9.6199e-15 1.0000e+00 hypermethylated 9.6199e-12 1.0000e+00 hypermethylated 0.48052021 5.5441e-05 hypermethylated 0.0126267 hypermethylated chr17 67920613 67921613 144508 ENSG00000211264 0.85975 191 7 0.79003 420 9 0.886066 232 7 0.812043 167 7 0.8577601 144 7 0.89893 409 9 0.860607 171 8 0.977397 174 7 0.796440 164 8 0.837137 140 7 0.792724 292 8 0.878307 113 7 0.968254 186 8 0.95978 94 5 0.853726 193 7 0.985714 58 5 0.7724090 35 2 0.946569 167 7 0.930128 376 9 0.840335 194 8 0.967372 88 8 0.826863 71 5 0.802255 108 7 0.854657 133 7 0.9454545 40 5 0.958228 392 9 0.858688 142 6 0.8945530 132 7 0.927653 214 7 0.865674 363 9 0.934636 428 8 0.95819 229 7 0.9019021 249 9 0.7884615 85 7 0.78752893 561 6 NA 0 0 0.896445 243 7 0.8227627 378 8 0.912681 170 7 0.890664 168 8 0.8784382 101 6 0.73734 80 5 0.953626 131 7 0.843705 0.893139 0.893166 0.872590 0.982005 0.936325 0.886073 0.986155 0.7645636 0.958939 0.89779 0.810546 0.958705 0.9388809 0.9827177 0.977253 0.972502 0.946710 0.9441945 0.918552 0.945603 0.970050 0.888934 0.985728 0.931799 0.974155 0.907361 0.888282 0.954990 0.977851 0.940247 0.943488 0.9018761 0.9534500 0.8676161 NA 0.903672 0.889344 0.922786 0.925537 0.959151 0.8929484 0.956727 5 0.91097 0.941880 -0.03006603 8 0.845161 0.875482 -0.03032151 0.99995265 0.0214787 weaklyHypometh 1.00000 1 insignificant 9.9931e-01 0.08328188 insignificant 1.000000 1.00000 insignificant -0.02431349 0.2833625 insignificant 1.00000 insignificant 0.910947 0.893140 0.0189276 8 0.829677 0.812296 0.0173813 5.7985e-02 3.4231e-01 insignificant 6.1037e-01 1.0000e+00 insignificant 5.4137e-01 3.5241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0357851 2.6162e-01 insignificant 1.0000e+00 insignificant 0.910947 0.913846 -0.00428091 6 0.82968 0.80985 0.0198228 3.5854e-01 4.7005e-01 insignificant 1.0000e+00 1.000000 insignificant 6.6960e-01 6.6148e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00065575 9.8737e-01 insignificant 1.000000 insignificant 0.941806 0.893140 0.054117 8 0.86303 0.812296 0.050735 1.9533e-03 9.0336e-01 weaklyHypermeth 3.0052e-02 1.0000e+00 weaklyHypermeth 1.7346e-01 9.2840e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0600986 8.2519e-02 insignificant 1.0000e+00 insignificant 0.941806 0.913846 2.5341e-02 6 0.863031 0.80985 0.05317646 2.0129e-02 9.8780e-01 weaklyHypermeth 3.9469e-01 1.00000000 insignificant 1.0981e-01 9.9024e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0249692 5.5761e-01 insignificant 1.000000 insignificant 0.893140 0.913846 -0.0310776 6 0.812296 0.80985 0.0024415 6.4307e-01 3.2573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1850e-01 6.0243e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03512934 4.5502e-01 insignificant 1.0000000 insignificant chr17 70457158 70458158 144580 OTOP3 ENSG00000182938 0.87091 109 5 0.57819 128 5 0.652766 156 7 0.844582 85 4 0.7389628 74 5 0.78577 290 5 0.778775 169 7 0.750392 101 7 0.770737 95 4 0.826922 89 5 0.846887 186 6 0.668019 119 5 0.677845 121 5 NA 0 0 0.753419 157 6 0.671451 113 6 0.6440245 150 5 0.712580 99 5 0.834634 165 4 0.751605 153 6 0.820346 76 6 0.580314 72 3 0.897860 135 5 0.819444 43 5 0.7212885 36 3 0.574320 127 5 0.594808 114 6 0.6404762 53 5 0.646861 87 6 0.793322 153 5 0.774964 240 5 0.62765 149 5 0.4799756 131 7 0.4293466 125 4 0.36939444 144 3 0.6459695 28 2 0.394986 58 5 0.8355062 143 5 0.549748 107 5 0.776758 148 4 0.5213490 85 3 0.86326 108 4 0.908949 63 5 0.838625 0.731562 0.720638 0.885005 0.913486 0.881414 0.862348 0.725657 0.7562446 0.838380 0.88558 0.734596 0.762503 NA 0.7903830 0.842786 0.721314 0.806961 0.7685298 0.787073 0.983466 0.711761 0.870772 0.833896 0.703895 0.817568 0.782400 0.833784 0.798410 0.799478 0.800836 0.855529 0.4910921 0.3757018 0.2287749 0.68550770 0.476377 0.840785 0.732508 0.823096 0.757133 0.8355275 0.895152 3 0.77948 0.790661 -0.00760113 5 0.736063 0.687816 0.04824663 0.08828219 0.6245046 insignificant 1.00000 1 insignificant 6.0105e-01 0.44405501 insignificant 1.000000 1.00000 insignificant 0.03754458 0.3228592 lowCoverage 1.00000 lowCoverage 0.780383 0.513514 0.2587337 5 0.760722 0.467928 0.2927931 4.1618e-12 9.7657e-01 hypermethylated 1.2611e-10 1.0000e+00 hypermethylated 7.8781e-05 9.9625e-01 hypermethylated 2.3873e-03 1.0000e+00 hypermethylated 0.2193197 2.9963e-02 lowCoverage 5.2567e-01 lowCoverage 0.779481 0.776908 0.01523060 4 0.73606 0.61449 0.1215700 6.5063e-03 7.4915e-01 lowCoverage 1.5131e-01 1.000000 lowCoverage 2.0572e-01 7.6330e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.02117061 8.0796e-01 lowCoverage 1.000000 lowCoverage 0.790661 0.514331 0.268103 5 0.68782 0.534775 0.153041 3.7725e-06 8.6277e-01 hypermethylated 8.7732e-05 1.0000e+00 hypermethylated 6.3022e-04 9.0739e-01 hypermethylated 1.5005e-02 1.0000e+00 hypermethylated 0.1817751 5.8596e-02 lowCoverage 8.2529e-01 lowCoverage 0.790661 0.776908 3.2879e-02 4 0.687816 0.61449 0.07332341 1.5716e-01 9.0034e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.8964e-01 7.7260e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0163740 8.5619e-01 lowCoverage 1.000000 lowCoverage 0.514331 0.776908 -0.2596908 4 0.534775 0.61449 -0.0797173 8.0568e-01 8.1483e-03 lowCoverage 1.0000e+00 1.5090e-01 lowCoverage 9.0210e-01 2.4531e-02 lowCoverage 1.0000e+00 5.5119e-01 lowCoverage -0.19814906 1.0311e-01 lowCoverage 1.0000000 lowCoverage chr17 70460445 70461445 144581 OTOP3 ENSG00000182938 0.89858 201 7 0.77148 277 8 0.799595 241 8 0.741878 112 6 0.8184684 120 6 0.85619 678 8 0.791029 157 6 0.752408 214 6 0.849567 177 6 0.734387 145 5 0.815770 215 6 0.752563 89 6 0.751732 194 6 0.95440 63 2 0.624076 194 6 0.550613 70 6 0.8097002 89 5 0.718365 136 5 0.893995 270 6 0.851665 612 6 0.840580 183 6 0.807110 412 6 0.855081 215 7 0.804684 753 6 0.6872915 181 4 0.762603 234 8 0.707359 958 6 0.6026680 247 6 0.804012 196 6 0.846899 248 8 0.816015 351 7 0.74458 463 6 0.4618346 239 8 0.5459736 129 6 0.58779762 122 6 0.4435360 113 6 0.699917 224 6 0.6625941 234 7 0.818930 195 6 0.844215 211 6 0.7947646 101 6 0.80107 122 6 0.805352 166 6 0.887346 0.806859 0.785339 0.820411 0.835122 0.853505 0.806889 0.815050 0.8606484 0.786497 0.80973 0.790549 0.778537 0.8319784 0.7845484 0.523830 0.844038 0.791120 0.8924555 0.863342 0.892229 0.813092 0.896940 0.867698 0.767198 0.884148 0.778672 0.680818 0.834590 0.869296 0.859793 0.872820 0.5738303 0.5693412 0.5764336 0.31022297 0.689259 0.749600 0.805059 0.828732 0.800020 0.7533112 0.827336 5 0.83235 0.693763 0.05031312 6 0.766894 0.752435 0.01445928 0.00031142 0.2144324 weaklyHypermeth 0.15571 1 insignificant 8.7755e-01 0.29055462 insignificant 1.000000 1.00000 insignificant 0.01358209 0.6559568 insignificant 1.00000 insignificant 0.832589 0.624882 0.2078567 6 0.866894 0.559582 0.3073121 2.8231e-15 1.0000e+00 hypermethylated 1.0456e-13 1.0000e+00 hypermethylated 2.0511e-05 1.0000e+00 hypermethylated 6.6166e-04 1.0000e+00 hypermethylated 0.2198805 1.8951e-03 weaklyHypermeth 6.3169e-02 weaklyHypermeth 0.832510 0.788679 0.04319805 6 0.83362 0.81788 0.0157385 3.7826e-02 3.2306e-01 weaklyHypermeth 6.7547e-01 1.000000 insignificant 2.8188e-01 1.6364e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02604303 2.5907e-01 insignificant 1.000000 insignificant 0.694006 0.625472 0.162156 6 0.79900 0.621757 0.177244 9.4565e-12 9.9467e-01 weaklyHypermeth 3.3773e-10 1.0000e+00 weaklyHypermeth 3.4208e-06 1.0000e+00 weaklyHypermeth 1.6289e-04 1.0000e+00 weaklyHypermeth 0.2062984 2.7213e-03 weaklyHypermeth 8.0037e-02 weaklyHypermeth 0.693937 0.788679 1.2356e-02 6 0.773877 0.81788 -0.04400229 1.2164e-01 2.2934e-02 inconclusive 1.0000e+00 1.00000000 insignificant 3.2246e-01 1.5159e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0396251 1.1556e-01 insignificant 1.000000 insignificant 0.624764 0.788679 -0.1679407 6 0.574477 0.81788 -0.2434017 1.0000e+00 4.9634e-09 weaklyHypometh 1.0000e+00 2.7574e-07 weaklyHypometh 9.9964e-01 7.1846e-05 weaklyHypometh 1.0000e+00 3.7814e-03 weaklyHypometh -0.24592357 1.8061e-03 weaklyHypometh 0.0787807 weaklyHypometh chr17 71120279 71121279 144585 ENSG00000188126 0.93057 182 11 0.84411 110 9 0.828333 86 9 0.911245 167 6 0.7632576 49 2 0.85963 475 11 0.691126 67 5 0.861469 102 7 0.946429 43 5 0.847917 69 9 0.895904 155 11 0.726667 39 4 0.667857 37 4 0.73333 14 1 0.850660 93 10 0.618056 39 5 0.7500000 11 0 0.835007 350 11 0.862784 228 11 0.878817 169 10 0.783633 76 5 0.803596 79 6 0.772312 154 10 0.729657 96 9 0.7440619 213 6 0.755569 135 9 0.756944 50 5 0.7164502 44 4 0.831107 140 11 0.841749 167 11 0.871644 158 11 0.86779 196 11 0.8492990 197 11 0.7070913 196 10 0.63095238 42 2 0.7746695 180 5 0.550613 93 9 0.7546132 181 11 0.888729 132 8 0.923330 231 11 0.8169231 159 10 0.98246 36 1 0.865184 241 11 0.944043 0.726774 0.828589 0.893030 0.784347 0.940820 0.736915 0.893416 0.9404762 0.916667 0.87834 0.846847 0.923423 0.7441441 0.9408639 0.750000 NA 0.889983 0.9262022 0.955533 1.000000 0.937630 0.874465 0.860360 0.846971 0.916171 0.819820 0.819820 0.891187 0.927813 0.976001 0.932344 0.8519925 0.8140222 0.7297297 0.95860853 0.752697 0.867582 0.847003 0.921573 0.847447 0.9800853 0.927527 1 0.84628 0.824154 0.01458500 10 0.838933 0.792980 0.04595355 0.12787279 0.8352447 insignificant 1.00000 1 insignificant 2.4098e-01 0.76235610 insignificant 1.000000 1.00000 insignificant 0.02561540 0.3233571 insignificant 1.00000 insignificant 0.847177 0.818898 0.0414693 10 0.871846 0.672279 0.1995668 3.0392e-03 9.9813e-01 weaklyHypermeth 3.9989e-02 1.0000e+00 weaklyHypermeth 5.4196e-03 9.9849e-01 weaklyHypermeth 1.0036e-01 1.0000e+00 insignificant 0.1039521 6.6224e-02 insignificant 9.1851e-01 insignificant 0.846030 0.879850 -0.02709786 10 0.79867 0.87702 -0.0783518 5.0646e-01 2.4022e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6669e-01 3.7681e-01 insignificant 1.0000e+00 1.000000 insignificant -0.08016574 4.5422e-02 weaklyHypometh 1.000000 insignificant 0.825768 0.818898 0.036600 11 0.83421 0.672279 0.161928 6.8026e-03 9.2404e-01 weaklyHypermeth 8.4509e-02 1.0000e+00 weaklyHypermeth 2.1842e-02 9.9210e-01 weaklyHypermeth 3.2121e-01 1.0000e+00 insignificant 0.0783367 1.3944e-01 insignificant 1.0000e+00 insignificant 0.823845 0.879850 -4.5898e-02 10 0.778724 0.87702 -0.09829371 4.2664e-01 4.2784e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 7.9495e-01 8.5830e-02 insignificant 1.0000e+00 1.000000 insignificant -0.1057811 1.3782e-02 weaklyHypometh 0.492197 insignificant 0.820744 0.879699 -0.0558938 10 0.794512 0.86584 -0.0713263 9.9657e-01 3.5348e-02 weaklyHypometh 1.0000e+00 5.4382e-01 insignificant 9.9792e-01 4.7258e-02 weaklyHypometh 1.0000e+00 8.7514e-01 insignificant -0.18411787 7.1644e-03 weaklyHypometh 0.2171027 insignificant chr17 71122466 71123466 144586 ENSG00000188126 0.83791 221 9 0.83725 189 9 0.783875 239 9 0.888644 142 7 0.8708955 130 9 0.87408 395 9 0.915102 180 9 0.856548 147 9 0.770405 170 9 0.858732 161 9 0.910502 299 9 0.911567 126 9 0.869558 232 9 0.83333 33 3 0.835200 204 9 0.959231 107 7 0.8220571 149 8 0.858229 170 7 0.898659 273 9 0.882269 248 9 0.842984 123 9 0.901190 63 4 0.898184 156 9 0.898687 92 9 0.7798128 77 5 0.874064 245 9 0.730943 143 9 0.8404451 77 7 0.909367 166 9 0.908410 269 9 0.759208 328 9 0.93716 310 9 0.6338051 212 9 0.7158499 166 9 0.81310564 268 8 0.7301948 64 6 0.687742 154 9 0.7075454 243 9 0.579597 212 9 0.760094 232 8 0.6974078 131 6 0.75989 189 7 0.916980 161 7 0.938802 0.789494 0.791272 0.850389 0.877903 0.883778 0.908421 0.877220 0.8682309 0.852687 0.90599 0.869621 0.906470 0.8924522 0.8496234 0.926998 0.834275 0.826560 0.9298461 0.882544 0.955349 0.882055 0.851951 0.948747 0.848155 0.886676 0.824475 0.872935 0.907335 0.931145 0.887439 0.951430 0.7929229 0.7947722 0.8605539 0.82714138 0.840183 0.664383 0.680494 0.824975 0.810654 0.8035077 0.911211 6 0.87287 0.885798 -0.01607901 9 0.843889 0.809419 0.03446992 0.85936879 0.3121453 insignificant 1.00000 1 insignificant 8.6784e-01 0.22582187 insignificant 1.000000 1.00000 insignificant 0.00699749 0.7522403 insignificant 1.00000 insignificant 0.873066 0.701897 0.1487007 9 0.875151 0.590144 0.2850074 1.7989e-12 9.9400e-01 weaklyHypermeth 5.6216e-11 1.0000e+00 weaklyHypermeth 1.2339e-04 8.9080e-01 weaklyHypermeth 3.0849e-03 1.0000e+00 weaklyHypermeth 0.1489953 7.6428e-04 weaklyHypermeth 3.1845e-02 weaklyHypermeth 0.873033 0.794595 0.07630196 7 0.86267 0.70487 0.1577924 2.5637e-09 2.3754e-01 weaklyHypermeth 1.8312e-07 1.000000 weaklyHypermeth 2.4690e-04 8.6254e-02 weaklyHypermeth 1.3717e-02 1.000000 weaklyHypermeth 0.12090870 9.0591e-02 insignificant 1.000000 insignificant 0.886986 0.701897 0.159278 9 0.84664 0.590144 0.256495 1.5529e-08 9.9966e-01 weaklyHypermeth 4.5674e-07 1.0000e+00 weaklyHypermeth 2.1920e-04 9.9852e-01 weaklyHypermeth 5.9243e-03 1.0000e+00 weaklyHypermeth 0.1419978 6.8244e-04 weaklyHypermeth 2.9671e-02 weaklyHypermeth 0.886820 0.794595 1.1311e-01 7 0.831302 0.70487 0.12642847 1.4009e-05 8.4118e-01 weaklyHypermeth 7.0047e-04 1.00000000 weaklyHypermeth 6.2684e-03 7.5961e-01 weaklyHypermeth 2.4109e-01 1.000000 insignificant 0.1139112 1.0597e-01 insignificant 1.000000 insignificant 0.702532 0.794595 -0.0349073 7 0.649158 0.70487 -0.0557158 9.5139e-01 6.5435e-02 insignificant 1.0000e+00 8.7246e-01 insignificant 9.2731e-01 1.6222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02808663 6.5566e-01 insignificant 1.0000000 insignificant chr17 71131768 71132768 144587 ENSG00000204325 0.84775 146 9 0.80684 315 10 0.819024 294 10 0.808442 107 7 0.7631392 211 10 0.90104 534 12 0.818745 314 11 0.870936 245 10 0.859047 206 9 0.940505 168 9 0.905708 334 10 0.745391 139 9 0.918197 203 10 0.93364 73 4 0.837199 213 10 0.994048 69 4 0.5958301 92 4 0.918250 129 6 0.806363 457 10 0.860184 237 11 0.782014 159 12 0.719780 32 2 0.910649 233 10 0.793892 155 9 0.7804327 92 3 0.889658 384 10 0.648923 145 11 0.8227976 111 11 0.865906 288 11 0.804829 373 10 0.922203 454 11 0.87354 318 10 0.8083824 233 11 0.8528425 235 11 0.75874805 480 12 0.8750000 37 4 0.572917 176 10 0.8107402 321 12 0.805728 214 8 0.837812 211 8 0.8950017 100 7 0.93128 149 9 0.824786 149 9 0.919598 0.772666 0.794992 0.874538 0.804957 0.887410 0.843966 0.928897 0.8214640 0.929686 0.86100 0.788985 0.876434 0.9299096 0.8867019 0.954354 0.865700 0.919186 0.9000137 0.857012 0.847301 0.912279 0.880289 0.919575 0.958297 0.861229 0.808515 0.861518 0.922603 0.888445 0.907236 0.901376 0.7574495 0.8818479 0.8544771 0.86353303 0.864191 0.785553 0.891270 0.910428 0.888353 0.8922397 0.941904 2 0.88063 0.881858 -0.01810837 10 0.858610 0.764812 0.09379880 0.51928331 0.4132353 insignificant 1.00000 1 insignificant 9.0671e-01 0.70004394 insignificant 1.000000 1.00000 insignificant 0.02962887 0.3373939 insignificant 1.00000 insignificant 0.880071 0.814865 0.0367200 10 0.822749 0.633854 0.1888954 1.0301e-03 7.7201e-01 weaklyHypermeth 1.4715e-02 1.0000e+00 weaklyHypermeth 3.0036e-01 9.0130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0677425 2.0537e-01 insignificant 1.0000e+00 insignificant 0.880286 0.885645 -0.03294548 8 0.83033 0.76297 0.0673602 9.7800e-01 4.0225e-03 weaklyHypometh 1.0000e+00 0.502819 insignificant 9.8663e-01 1.0468e-02 weaklyHypometh 1.0000e+00 0.748205 insignificant -0.01140677 7.1493e-01 insignificant 1.000000 insignificant 0.881387 0.815416 0.052756 11 0.72833 0.633854 0.094477 5.9296e-04 5.6361e-01 weaklyHypermeth 9.7207e-03 1.0000e+00 weaklyHypermeth 3.5555e-01 9.7105e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0381137 4.7019e-01 insignificant 1.0000e+00 insignificant 0.882136 0.885784 -1.4663e-02 9 0.752459 0.77779 -0.02532801 9.9458e-01 4.6607e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9524e-01 2.2801e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0410356 2.3865e-01 insignificant 1.000000 insignificant 0.821183 0.885645 -0.0792191 9 0.739319 0.76297 -0.0236538 9.7702e-01 7.4255e-02 insignificant 1.0000e+00 9.5198e-01 insignificant 9.9698e-01 1.5606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07914930 1.5701e-01 insignificant 1.0000000 insignificant chr17 71645516 71646516 144591 EXOC7 ENSG00000182473 0.23091 95 7 0.10763 195 4 0.163278 392 10 0.099327 81 4 0.0245945 99 5 0.15862 183 9 0.064286 102 4 0.032738 74 3 0.034336 143 7 0.013187 169 6 0.045183 72 6 0.088138 154 7 0.025714 107 5 0.22000 50 1 0.070839 129 3 0.087834 121 6 0.1433140 93 5 0.184534 78 3 0.042817 101 7 0.078446 103 5 0.074074 63 5 0.037825 68 3 0.261592 177 8 0.084184 77 2 0.0075188 50 1 0.105265 278 7 0.057390 73 3 0.0696581 59 3 0.025000 42 4 0.172117 273 9 0.128994 439 10 0.21342 129 9 0.3662444 183 4 0.7410714 49 5 0.60335936 157 4 0.6092593 33 2 0.489943 40 1 0.6314344 123 4 0.144918 100 6 0.085989 96 6 0.0924242 95 4 0.12306 81 3 0.086981 106 2 0.065516 0.026105 0.164058 0.077349 0.079559 0.223580 0.102047 0.058308 0.0615533 0.077111 0.10323 0.153652 0.016220 NA 0.0722652 0.154161 0.041903 0.164050 0.1353932 0.094315 0.255646 0.043678 0.115837 0.089830 0.043967 0.029834 0.086430 0.056254 0.110100 0.024044 0.027666 0.281808 0.4860346 0.9058689 NA 0.56836043 0.652334 0.603150 0.053279 0.089220 0.013923 0.0785042 0.103132 1 0.14818 0.180974 0.01568686 9 0.227634 0.133393 0.09424074 0.54002518 0.8331451 insignificant 1.00000 1 insignificant 7.5085e-01 0.87242072 insignificant 1.000000 1.00000 insignificant -0.00730034 0.7892843 insignificant 1.00000 insignificant 0.147840 0.548718 -0.3870981 4 0.150398 0.561599 -0.4112013 1.0000e+00 2.4586e-43 lowCoverage 1.0000e+00 2.4586e-40 lowCoverage 1.0000e+00 1.1845e-15 lowCoverage 1.0000e+00 1.1845e-12 lowCoverage -0.4777657 1.4917e-04 lowCoverage 7.8510e-03 lowCoverage 0.147723 0.086316 0.04395912 3 0.13673 0.10517 0.0315507 2.3262e-02 9.2638e-01 lowCoverage 4.3077e-01 1.000000 lowCoverage 2.9012e-01 9.9449e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.01088780 5.7315e-01 lowCoverage 1.000000 lowCoverage 0.181080 0.548718 -0.324566 4 0.14673 0.561599 -0.414866 1.0000e+00 1.2953e-25 lowCoverage 1.0000e+00 1.2953e-22 lowCoverage 1.0000e+00 7.1881e-12 lowCoverage 1.0000e+00 4.3586e-09 lowCoverage -0.4704654 8.5795e-05 lowCoverage 5.3622e-03 lowCoverage 0.181344 0.086864 2.8208e-02 3 0.163944 0.09641 0.06753408 3.1749e-01 9.9530e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 3.5947e-01 9.9888e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0035875 8.8934e-01 lowCoverage 1.000000 lowCoverage 0.548718 0.087234 0.5176847 1 0.561599 0.11569 0.4459070 7.9222e-16 1.0000e+00 lowCoverage 3.9611e-13 1.0000e+00 lowCoverage 1.1635e-08 1.0000e+00 lowCoverage 5.8176e-06 1.0000e+00 lowCoverage 0.46687793 2.1330e-04 lowCoverage 0.0193910 lowCoverage chr17 71654480 71655480 144592 FOXJ1 ENSG00000129654 0.73160 31 3 0.84491 114 4 0.580215 83 5 0.733918 45 3 0.8055556 33 4 0.68496 149 7 0.503571 46 5 0.627551 71 5 0.842857 39 2 0.549660 49 5 0.556337 200 7 0.357143 17 1 0.591270 29 2 0.55000 28 2 0.663265 41 4 0.400000 12 2 0.4000000 13 0 0.600000 47 3 0.620245 118 6 0.576453 42 5 0.742857 51 6 0.678571 21 2 0.988889 58 3 0.626476 85 7 0.5952381 36 2 0.663004 142 5 0.855263 37 2 0.4154762 37 3 0.785714 54 5 0.888819 135 4 0.633139 241 5 0.65187 103 6 0.4388889 91 5 0.6184211 45 3 0.40592334 146 5 0.2727273 30 3 0.652172 62 5 0.6262542 151 7 0.635374 52 3 0.616717 45 4 0.6461538 38 5 0.46528 29 2 0.633658 49 3 0.808518 0.702972 0.787368 0.826448 0.923611 0.784286 0.479687 0.709821 0.7250000 0.745040 0.66132 0.480143 0.608796 0.8601991 0.8601190 0.793021 0.494604 0.847917 0.8002474 0.675685 0.983333 0.830071 0.952384 0.758729 0.784722 0.747176 0.797697 0.707551 0.930556 0.781642 0.787169 0.855481 0.2815972 0.4777047 0.1084858 0.61368576 0.378551 0.552868 0.779663 0.717997 0.800321 0.6675347 0.798848 0 0.73737 0.840841 -0.05651198 5 0.609315 0.657325 -0.04801034 0.99718604 0.0018339 weaklyHypometh 1.00000 1 insignificant 9.9668e-01 0.00900174 weaklyHypometh 1.000000 0.92922 insignificant -0.09946718 0.0786668 lowCoverage 1.00000 lowCoverage 0.737365 0.651429 0.1629740 5 0.609315 0.531831 0.0774838 7.0205e-06 2.9743e-01 weaklyHypermeth 1.3246e-04 1.0000e+00 weaklyHypermeth 2.3626e-02 3.7486e-01 weaklyHypermeth 3.4241e-01 1.0000e+00 insignificant 0.1085781 1.6004e-01 lowCoverage 1.0000e+00 lowCoverage 0.737365 0.746479 -0.01501579 3 0.60931 0.61915 -0.0098342 8.0084e-01 1.2693e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.5280e-01 3.3216e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.01153981 8.0561e-01 lowCoverage 1.000000 lowCoverage 0.840841 0.651429 0.183437 5 0.65732 0.531831 0.125494 6.5679e-08 8.4825e-01 weaklyHypermeth 1.8244e-06 1.0000e+00 weaklyHypermeth 8.6474e-04 9.3498e-01 weaklyHypermeth 1.9653e-02 1.0000e+00 weaklyHypermeth 0.2080453 2.1478e-02 lowCoverage 3.9051e-01 lowCoverage 0.840841 0.746479 4.3156e-02 3 0.657325 0.61915 0.03817616 2.7864e-01 6.8836e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.0922e-01 8.6513e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.1110070 6.5516e-02 lowCoverage 1.000000 lowCoverage 0.651429 0.746479 -0.2197453 3 0.531831 0.61915 -0.0873180 5.8413e-01 2.3485e-04 lowCoverage 1.0000e+00 6.9074e-03 lowCoverage 6.4695e-01 4.9134e-02 lowCoverage 1.0000e+00 8.9335e-01 lowCoverage -0.09703828 2.1170e-01 lowCoverage 1.0000000 lowCoverage chr17 71804209 71805209 144595 FAM100B ENSG00000185262 0.86060 70 5 0.67131 42 5 0.784722 29 2 0.862259 117 5 0.7518939 42 4 0.86136 101 5 0.606782 52 5 0.780952 64 5 0.681633 44 5 0.732143 21 1 0.731151 151 5 0.500000 7 0 0.807407 38 3 0.92034 29 2 0.666667 21 2 0.750000 14 0 NA 0 0 0.837719 72 1 0.890741 43 2 0.878571 30 1 0.702381 19 2 0.500000 3 0 0.688312 45 5 0.631629 29 2 0.8071228 44 4 0.825611 92 5 0.726190 35 4 0.5000000 8 0 0.758889 45 2 0.855556 85 5 0.825660 99 5 0.71040 95 5 0.7494048 77 5 0.9166667 56 4 0.82103175 152 5 0.9017544 62 3 0.811111 51 5 0.8411616 78 5 0.831026 70 4 0.783885 102 5 0.6984339 135 4 0.46250 22 1 0.830407 108 4 0.548452 0.499924 0.406566 0.588165 0.540978 0.712695 0.421531 0.439394 0.5930736 0.356061 0.59806 0.843074 0.583165 0.8172906 0.5367965 0.469697 NA 0.538809 0.6835017 0.707792 0.393939 NA 0.390004 0.602847 0.630507 0.599995 0.238095 0.617345 0.547071 0.636364 0.534063 0.453604 0.4522006 0.6969697 0.5158730 0.79319511 0.643098 0.653627 0.625641 0.553652 0.458759 0.2472364 0.597264 0 0.75481 0.733668 0.03641701 5 0.798135 0.782503 0.01563171 0.07075152 0.9012514 insignificant 1.00000 1 insignificant 2.6869e-01 0.69831993 insignificant 1.000000 1.00000 insignificant 0.05619173 0.1980410 lowCoverage 1.00000 lowCoverage 0.756423 0.833684 -0.0064813 5 0.824014 0.831544 -0.0075300 9.2744e-01 5.8208e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8339e-01 4.4168e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0730171 5.6619e-02 lowCoverage 8.2885e-01 lowCoverage 0.754813 0.796339 0.03938741 4 0.79813 0.77440 0.0237364 1.9912e-03 9.2425e-01 lowCoverage 5.3817e-02 1.000000 lowCoverage 3.0842e-02 9.5686e-01 lowCoverage 8.5671e-01 1.000000 lowCoverage 0.04592080 5.5854e-01 lowCoverage 1.000000 lowCoverage 0.730051 0.834034 -0.049057 5 0.66822 0.855610 -0.187392 9.9134e-01 9.5260e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8087e-01 1.3314e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1292089 7.8950e-03 lowCoverage 1.9737e-01 lowCoverage 0.733668 0.796339 6.4283e-03 4 0.782503 0.77440 0.00810472 1.1660e-01 6.9896e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.4308e-01 8.8322e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0102709 8.9830e-01 lowCoverage 1.000000 lowCoverage 0.833684 0.794457 0.0555632 4 0.831544 0.73680 0.0947463 4.2357e-02 9.9721e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9304e-02 9.9966e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.11893793 1.6585e-01 lowCoverage 1.0000000 lowCoverage chr17 72830549 72831549 144602 SEPT9 ENSG00000184640 0.82513 318 11 0.64417 198 14 0.446167 130 13 0.682655 271 10 0.8101852 74 8 0.67239 539 14 0.666279 148 11 0.547619 147 10 0.566837 82 8 0.792298 108 9 0.855078 216 13 0.400758 52 5 0.480208 96 3 0.71667 72 8 0.701648 81 8 0.809524 27 3 0.4381818 26 2 0.459092 444 9 0.391291 290 13 0.573728 223 9 0.807322 97 9 0.505533 157 10 0.637002 116 13 0.725472 106 8 0.6571809 570 12 0.551403 193 13 0.568121 127 10 0.5055331 57 4 0.765468 188 9 0.600409 235 12 0.541320 361 14 0.79734 226 11 0.0106787 222 10 0.0021978 276 11 0.00000000 270 6 0.0181828 556 12 0.146324 201 13 0.0047619 473 14 0.504199 220 11 0.604340 256 11 0.4363267 121 10 0.53267 250 8 0.463571 210 11 0.789600 0.576029 0.529186 0.699188 0.713942 0.743933 0.737812 0.613004 0.5896864 0.805871 0.81174 0.508454 0.355769 0.7000000 0.6498626 0.698586 0.477702 0.428854 0.4510802 0.622405 0.801529 0.496785 0.765591 0.714946 0.676654 0.580806 0.755550 0.414016 0.855329 0.560686 0.590797 0.861770 0.0147511 0.0042582 0.0174658 0.00306999 0.129269 0.010302 0.538377 0.525913 0.472953 0.4838305 0.537644 3 0.65119 0.691485 -0.04113756 10 0.628197 0.540574 0.08762362 0.85786827 0.4528929 insignificant 1.00000 1 insignificant 9.5720e-01 0.89545246 insignificant 1.000000 1.00000 insignificant -0.01451309 0.7593261 insignificant 1.00000 insignificant 0.649658 0.021032 0.6267451 10 0.506294 0.094849 0.4114453 5.2030e-58 1.0000e+00 hypermethylated 1.0406e-55 1.0000e+00 hypermethylated 4.4073e-24 1.0000e+00 hypermethylated 1.1018e-21 1.0000e+00 hypermethylated 0.5936380 9.2223e-13 hypermethylated 2.3056e-10 hypermethylated 0.650596 0.563860 0.05442280 9 0.59248 0.63323 -0.0407503 2.0189e-02 9.7200e-01 weaklyHypermeth 3.9586e-01 1.000000 insignificant 5.6017e-02 9.9988e-01 insignificant 1.0000e+00 1.000000 insignificant 0.11577484 2.0167e-02 weaklyHypermeth 0.530719 insignificant 0.691894 0.020541 0.670071 13 0.52169 0.044563 0.477128 9.1611e-68 1.0000e+00 hypermethylated 4.5805e-65 1.0000e+00 hypermethylated 3.7739e-22 1.0000e+00 hypermethylated 1.6965e-19 1.0000e+00 hypermethylated 0.6081510 6.1016e-11 hypermethylated 6.1016e-08 hypermethylated 0.691643 0.563033 9.8762e-02 9 0.544262 0.59989 -0.05562872 3.0301e-03 9.8697e-01 weaklyHypermeth 8.6574e-02 1.00000000 weaklyHypermeth 4.0191e-03 9.9989e-01 weaklyHypermeth 1.7474e-01 1.000000 insignificant 0.1302879 1.0399e-02 weaklyHypermeth 0.385165 insignificant 0.021053 0.561069 -0.5498399 9 0.106008 0.51162 -0.4056158 1.0000e+00 2.3928e-41 hypomethylated 1.0000e+00 2.3928e-38 hypomethylated 1.0000e+00 2.9582e-12 hypomethylated 1.0000e+00 1.4791e-09 hypomethylated -0.47786311 1.1709e-06 hypomethylated 0.0011709 hypomethylated chr17 73067936 73068936 144605 ENSG00000203307 0.86739 364 13 0.89699 717 13 0.794864 495 13 0.929576 317 11 0.8474075 319 13 0.89997 1346 13 0.944974 523 13 0.914325 458 13 0.934083 321 13 0.920656 308 13 0.904442 808 13 0.953107 208 9 0.888395 283 13 0.94439 167 10 0.915478 403 13 0.948100 167 12 0.9091407 50 4 0.872594 318 13 0.958422 740 13 0.908422 680 13 0.953554 227 13 0.938166 112 8 0.853604 329 13 0.909019 228 13 0.9285714 91 10 0.951563 816 13 0.887377 363 12 0.9317892 195 13 0.891809 433 12 0.948772 709 13 0.959257 1031 13 0.93848 702 13 0.7959134 491 13 0.7704465 255 13 0.60829242 722 13 0.7582418 38 2 0.781250 420 13 0.7775127 719 13 0.938343 571 12 0.932170 539 13 0.8888547 318 13 0.87387 301 12 0.871755 374 12 0.897298 0.891688 0.770281 0.913934 0.903335 0.924867 0.939556 0.900529 0.9096538 0.918598 0.93100 0.930194 0.900269 0.9446944 0.9267607 0.932133 0.930998 0.911609 0.9520379 0.883290 0.980212 0.959899 0.877839 0.891890 0.939370 0.950832 0.854038 0.922003 0.870993 0.947021 0.965696 0.934633 0.8053709 0.7667170 0.5384596 0.79399774 0.828971 0.814737 0.954185 0.934435 0.923261 0.8343458 0.933144 11 0.91390 0.931245 -0.01509851 13 0.905295 0.926703 -0.02140808 0.99491309 0.0152746 weaklyHypometh 1.00000 1 insignificant 9.9662e-01 0.05193551 insignificant 1.000000 1.00000 insignificant -0.01669386 0.2072807 insignificant 1.00000 insignificant 0.913803 0.741021 0.1659728 13 0.840631 0.698970 0.1416608 7.0133e-27 1.0000e+00 weaklyHypermeth 4.6755e-25 1.0000e+00 weaklyHypermeth 4.0948e-08 1.0000e+00 weaklyHypermeth 2.0474e-06 1.0000e+00 weaklyHypermeth 0.1590268 1.7810e-03 weaklyHypermeth 6.1415e-02 weaklyHypermeth 0.913904 0.927722 -0.00729731 13 0.90529 0.90873 -0.0034374 5.0644e-01 2.8931e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 2.6408e-01 1.1781e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00663685 7.0511e-01 insignificant 1.000000 insignificant 0.931245 0.741301 0.191154 13 0.92670 0.752737 0.173966 1.8110e-20 1.0000e+00 weaklyHypermeth 1.1319e-18 1.0000e+00 weaklyHypermeth 2.5231e-09 1.0000e+00 weaklyHypermeth 2.2937e-07 1.0000e+00 weaklyHypermeth 0.1757207 1.0330e-03 weaklyHypermeth 3.8261e-02 weaklyHypermeth 0.931245 0.927722 7.2216e-03 13 0.926703 0.90873 0.01797064 9.5908e-02 6.3914e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.1661e-01 8.3241e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0233307 2.1150e-01 insignificant 1.000000 insignificant 0.741301 0.927722 -0.1670816 13 0.752737 0.90873 -0.1559952 9.9997e-01 2.9336e-09 weaklyHypometh 1.0000e+00 1.7257e-07 weaklyHypometh 9.9973e-01 3.9724e-05 weaklyHypometh 1.0000e+00 2.4827e-03 weaklyHypometh -0.15238997 1.8279e-03 weaklyHypometh 0.0787807 weaklyHypometh chr17 73438228 73439228 144617 ENSG00000204283 0.95238 17 0 0.55692 211 7 0.487874 188 7 0.500000 21 0 0.4668803 62 4 0.66026 36 3 0.443209 123 4 0.464087 65 4 0.433333 24 4 0.666667 11 0 0.528544 98 4 0.348485 48 4 0.600000 5 0 0.95833 16 2 0.420000 41 4 0.340000 23 4 0.0000000 6 1 0.315476 21 2 0.500000 10 0 0.583333 13 0 0.321429 17 1 0.450000 16 2 0.681179 70 7 0.400000 24 4 1.0000000 1 0 0.788005 244 7 0.208333 10 0 0.1200000 23 4 0.760000 19 2 0.562031 241 7 0.484547 296 8 0.26190 27 1 0.0330498 203 7 0.2000000 18 0 0.01569859 264 6 NA 0 0 0.431987 86 4 0.1241039 140 7 0.482143 29 3 0.666667 27 4 0.8000000 5 0 0.00000 2 0 0.400000 20 4 1.000000 0.425804 0.599167 0.750000 0.200000 0.467949 0.600000 0.534722 0.3000000 1.000000 0.73457 0.287879 0.166667 0.8611111 0.3666667 0.100000 NA 0.408542 0.1666667 0.444444 0.166667 0.400000 0.555556 0.277778 NA 0.709854 0.277778 0.033333 0.833333 0.623637 0.528770 0.041667 0.0251852 0.4583333 0.0595238 NA 0.306256 0.091398 0.645833 0.133333 1.000000 NA 0.266667 0 0.56497 0.630567 -0.07388507 4 0.452231 0.518602 -0.06637092 0.99491569 0.0070806 lowCoverage 1.00000 1 lowCoverage 5.2220e-01 0.35550517 lowCoverage 1.000000 1.00000 lowCoverage 0.00817004 0.9282367 lowCoverage 1.00000 lowCoverage 0.564966 0.108298 0.4513749 4 0.452231 0.161703 0.2905279 2.6423e-20 9.0038e-01 lowCoverage 1.2582e-18 1.0000e+00 lowCoverage 2.7128e-08 9.6423e-01 lowCoverage 1.5071e-06 1.0000e+00 lowCoverage 0.3503213 4.9147e-03 lowCoverage 1.3283e-01 lowCoverage 0.586760 0.530120 0.04769994 0 0.56124 0.53409 0.0271439 1.4438e-01 5.6235e-01 noCoverage 1.0000e+00 1.000000 noCoverage 1.6018e-01 8.4881e-01 noCoverage 1.0000e+00 1.000000 noCoverage 0.04152724 7.8536e-01 lowCoverage 1.000000 lowCoverage 0.630567 0.108298 0.529699 6 0.51860 0.161703 0.356899 3.4913e-19 1.0000e+00 hypermethylated 2.0537e-17 1.0000e+00 hypermethylated 4.1376e-05 9.9880e-01 hypermethylated 1.4268e-03 1.0000e+00 hypermethylated 0.3421513 7.8920e-03 lowCoverage 1.9737e-01 lowCoverage 0.641372 0.530120 1.1605e-01 0 0.627813 0.53409 0.09371892 4.7653e-02 6.3357e-01 noCoverage 8.2161e-01 1.00000000 noCoverage 6.2879e-01 5.8730e-01 noCoverage 1.0000e+00 1.000000 noCoverage 0.0333572 8.3761e-01 lowCoverage 1.000000 lowCoverage 0.104435 0.530120 -0.4287199 0 0.082904 0.53409 -0.4511899 1.0000e+00 1.2820e-07 noCoverage 1.0000e+00 6.1046e-06 noCoverage 1.0000e+00 2.4050e-04 noCoverage 1.0000e+00 1.0021e-02 noCoverage -0.30879407 9.3488e-02 lowCoverage 1.0000000 lowCoverage chr17 73776477 73777477 144624 ENSG00000220038 0.36900 322 11 0.24826 199 11 0.358060 279 12 0.263311 229 11 0.2283911 158 11 0.38520 581 12 0.240452 233 12 0.358431 212 11 0.261240 277 12 0.272844 236 12 0.261257 344 12 0.191825 158 11 0.138392 237 9 0.19795 118 10 0.234286 223 12 0.268519 66 5 0.1412608 136 8 0.175979 272 11 0.214497 443 11 0.205712 391 12 0.240450 117 9 0.250812 211 12 0.278628 228 12 0.293360 129 11 0.2654135 537 10 0.230691 362 11 0.246479 190 11 0.2231010 154 12 0.333749 199 11 0.160106 345 11 0.304973 478 12 0.19146 397 12 0.1458645 267 12 0.0721015 287 8 0.19235067 479 11 0.0343369 266 11 0.273279 250 9 0.0449801 351 11 0.173131 225 11 0.060608 250 11 0.2092964 190 11 0.13140 271 8 0.060808 205 10 0.398498 0.277649 0.384996 0.253286 0.263111 0.458875 0.275344 0.329991 0.2549200 0.291398 0.30813 0.215751 0.170438 0.2842792 0.2471069 0.244966 0.235031 0.199812 0.2303771 0.242053 0.296437 0.226020 0.288949 0.225157 0.319536 0.234696 0.341217 0.212816 0.350075 0.191725 0.344293 0.259416 0.2025925 0.1072337 0.2162397 0.05085883 0.279697 0.054784 0.156645 0.066938 0.202920 0.1486665 0.088569 9 0.28820 0.273952 0.02353021 12 0.281823 0.249500 0.03232276 0.10069189 0.9915312 insignificant 1.00000 1 insignificant 6.7643e-01 0.92017522 insignificant 1.000000 1.00000 insignificant -0.00085882 0.9679687 insignificant 1.00000 insignificant 0.288202 0.172196 0.1466901 11 0.281823 0.169449 0.1123740 3.1159e-11 1.0000e+00 weaklyHypermeth 8.9025e-10 1.0000e+00 weaklyHypermeth 2.3741e-08 1.0000e+00 weaklyHypermeth 1.3965e-06 1.0000e+00 weaklyHypermeth 0.1235911 2.1491e-02 weaklyHypermeth 4.0549e-01 insignificant 0.288119 0.130702 0.18123644 11 0.26364 0.11572 0.1479199 4.3098e-14 1.0000e+00 weaklyHypermeth 5.3873e-12 1.000000 weaklyHypermeth 6.8068e-10 1.0000e+00 weaklyHypermeth 1.7017e-07 1.000000 weaklyHypermeth 0.12369488 9.1009e-03 weaklyHypermeth 0.293576 insignificant 0.273788 0.172105 0.129361 11 0.23168 0.157345 0.074333 4.6000e-07 1.0000e+00 weaklyHypermeth 1.1795e-05 1.0000e+00 weaklyHypermeth 4.2408e-07 1.0000e+00 weaklyHypermeth 2.3560e-05 1.0000e+00 weaklyHypermeth 0.1244500 2.1160e-02 weaklyHypermeth 3.9051e-01 insignificant 0.273899 0.130702 1.5266e-01 11 0.242514 0.11572 0.12679251 4.7939e-11 1.0000e+00 weaklyHypermeth 6.8484e-09 1.00000000 weaklyHypermeth 2.7567e-08 1.0000e+00 weaklyHypermeth 6.8919e-06 1.000000 weaklyHypermeth 0.1245537 9.5216e-03 weaklyHypermeth 0.366217 insignificant 0.171414 0.130702 0.0292458 11 0.128014 0.11572 0.0122925 8.0733e-01 6.1191e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8033e-01 5.2394e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00010375 9.9834e-01 insignificant 1.0000000 insignificant chr17 73822899 73823899 144625 ENSG00000204277 0.54047 151 5 0.32075 123 5 0.325050 147 5 0.405022 125 5 0.3052632 74 4 0.59402 225 5 0.335866 98 5 0.437059 57 5 0.534056 84 5 0.389206 69 4 0.537781 127 5 0.538145 156 4 0.271146 77 4 0.54545 11 1 0.329717 74 4 0.582900 84 4 0.3974817 161 4 0.315873 128 5 0.163100 158 5 0.392801 146 5 0.162540 68 4 0.415020 85 4 0.507691 140 5 0.319762 72 4 0.4943590 64 5 0.549292 204 5 0.367439 102 4 0.4508145 61 4 0.385593 55 5 0.408513 124 5 0.323814 256 5 0.28857 203 5 0.5952135 110 5 0.4923810 81 5 0.54346405 135 5 0.5716508 113 5 0.617557 124 5 0.1767259 193 5 0.659736 162 5 0.656735 167 5 0.4668561 126 5 0.51122 135 5 0.576777 138 5 0.490351 0.246746 0.262687 0.306780 0.225424 0.549767 0.265157 0.318292 0.4116808 0.262704 0.44287 0.479973 0.102312 NA 0.3358349 0.588051 0.392591 0.276493 0.1060157 0.293105 0.191941 0.256832 0.438030 0.181910 0.381009 0.432827 0.216198 0.315626 0.291801 0.286314 0.216031 0.265821 0.6023981 0.5616079 0.4659214 0.49023294 0.602878 0.055233 0.588775 0.600491 0.401645 0.4195929 0.482981 4 0.40659 0.357043 0.03851532 5 0.422401 0.391726 0.03067434 0.08199685 0.8562956 insignificant 1.00000 1 insignificant 1.7293e-01 0.71134539 insignificant 1.000000 1.00000 insignificant 0.02360717 0.5703254 lowCoverage 1.00000 lowCoverage 0.406593 0.480159 -0.0411076 5 0.422401 0.465901 -0.0435007 5.3986e-01 9.5404e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2236e-01 3.5580e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0864406 2.7164e-01 lowCoverage 1.0000e+00 lowCoverage 0.406593 0.578297 -0.15018987 5 0.42240 0.57816 -0.1557546 9.9929e-01 2.9690e-05 weaklyHypometh 1.0000e+00 0.029690 weaklyHypometh 9.9967e-01 3.8173e-05 weaklyHypometh 1.0000e+00 0.038173 weaklyHypometh -0.16120696 8.2234e-03 lowCoverage 0.278074 lowCoverage 0.357043 0.480159 -0.080456 5 0.39173 0.465901 -0.074175 6.0240e-01 4.6053e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.9646e-01 4.0211e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1100478 1.7810e-01 lowCoverage 1.0000e+00 lowCoverage 0.357043 0.578297 -1.9197e-01 5 0.391726 0.57816 -0.18642899 9.9985e-01 4.0641e-07 weaklyHypometh 1.0000e+00 0.00040641 weaklyHypometh 9.7368e-01 4.5349e-05 weaklyHypometh 1.0000e+00 0.045349 weaklyHypometh -0.1848141 4.2602e-03 lowCoverage 0.250602 lowCoverage 0.480159 0.578297 -0.1161529 5 0.465901 0.57816 -0.1122539 9.8419e-01 5.1609e-02 insignificant 1.0000e+00 7.3210e-01 insignificant 8.1050e-01 1.8470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07476635 3.6206e-01 insignificant 1.0000000 insignificant chr17 73831849 73832849 144627 ENSG00000204277 0.43971 270 12 0.39902 302 10 0.572478 380 12 0.569414 249 10 0.4069229 212 12 0.70897 469 12 0.356549 248 12 0.468872 281 12 0.385219 276 11 0.516279 330 11 0.481912 353 13 0.592809 162 11 0.186924 293 11 0.49816 114 4 0.325705 236 11 0.748041 147 8 0.4891002 274 11 0.319567 218 8 0.457918 384 12 0.331075 317 12 0.594186 99 8 0.158704 165 9 0.643421 254 12 0.390403 132 12 0.4451533 161 7 0.350500 358 12 0.429258 219 12 0.4179647 151 7 0.336915 262 9 0.351109 369 12 0.361512 478 12 0.57380 329 12 0.0483537 433 12 0.0344519 257 10 0.10936070 409 8 0.0949074 168 10 0.034905 240 12 0.0625313 376 12 0.347150 251 11 0.364077 245 11 0.3862585 178 5 0.21836 189 6 0.250805 268 10 0.432703 0.290728 0.499557 0.480370 0.350288 0.655566 0.343174 0.461036 0.3618477 0.456277 0.47708 0.556811 0.176348 0.4201875 0.3286048 0.739171 0.495689 0.232411 0.3955671 0.314211 0.510194 0.122382 0.593368 0.402237 0.419287 0.283303 0.429383 0.313123 0.326277 0.240243 0.355131 0.569481 0.0252512 0.0277361 0.0303826 0.04374650 0.019791 0.026813 0.281396 0.262525 0.255960 0.2277254 0.209823 4 0.47978 0.437689 0.04274688 12 0.467262 0.429556 0.03770572 0.08306322 0.9969881 insignificant 1.00000 1 insignificant 9.5309e-02 0.98474863 insignificant 1.000000 1.00000 insignificant 0.04165449 0.4013780 insignificant 1.00000 insignificant 0.479782 0.106213 0.4022996 12 0.467262 0.060509 0.4067532 9.3396e-47 1.0000e+00 hypermethylated 1.0377e-44 1.0000e+00 hypermethylated 2.4750e-26 1.0000e+00 hypermethylated 8.2499e-24 1.0000e+00 hypermethylated 0.3986468 1.2043e-11 hypermethylated 2.4086e-09 hypermethylated 0.479782 0.227233 0.16303521 10 0.46726 0.35848 0.1087794 2.5422e-08 9.9992e-01 weaklyHypermeth 1.5889e-06 1.000000 weaklyHypermeth 1.3448e-06 9.9980e-01 weaklyHypermeth 1.4555e-04 1.000000 weaklyHypermeth 0.14940112 6.1571e-03 weaklyHypermeth 0.267702 insignificant 0.437689 0.106213 0.363865 12 0.42956 0.060509 0.369047 7.5593e-29 1.0000e+00 hypermethylated 8.3993e-27 1.0000e+00 hypermethylated 8.7218e-21 1.0000e+00 hypermethylated 2.1804e-18 1.0000e+00 hypermethylated 0.3569923 6.4198e-07 hypermethylated 8.0248e-05 hypermethylated 0.437689 0.227233 1.1892e-01 10 0.429556 0.35848 0.07107365 1.9458e-03 9.9932e-01 weaklyHypermeth 5.7229e-02 1.00000000 weaklyHypermeth 1.2521e-02 9.9252e-01 weaklyHypermeth 4.1738e-01 1.000000 insignificant 0.1077466 5.2751e-02 insignificant 1.000000 insignificant 0.106213 0.227233 -0.2160375 10 0.060509 0.35848 -0.2979738 1.0000e+00 6.3377e-18 hypomethylated 1.0000e+00 1.2675e-15 hypomethylated 1.0000e+00 1.0569e-10 hypomethylated 1.0000e+00 2.6422e-08 hypomethylated -0.24924567 7.7149e-04 hypomethylated 0.0453817 hypomethylated chr17 73836731 73837731 144628 ENSG00000204277 0.84748 253 7 0.71340 257 9 0.778298 170 9 0.903030 254 8 0.7895503 57 6 0.85054 506 9 0.668038 94 4 0.764896 247 9 0.711396 129 7 0.877961 126 7 0.865681 351 9 0.884921 44 1 0.795523 260 9 0.77905 67 5 0.789105 140 6 0.861111 19 1 0.6525974 61 4 0.681135 321 7 0.862349 418 9 0.829620 285 9 0.705864 114 7 0.732182 157 9 0.846880 187 9 0.585459 121 6 0.6653733 148 8 0.845531 308 9 0.776864 214 9 0.5386364 64 5 0.841711 244 9 0.876353 312 9 0.847528 409 9 0.82168 329 9 0.1008698 263 9 0.1534956 201 9 0.00000000 80 2 0.0000000 78 6 0.320854 132 9 0.0078163 498 9 0.732299 173 7 0.798818 277 9 0.8061684 179 6 0.80158 161 6 0.720767 214 7 0.858133 0.681203 0.719352 0.859701 0.813220 0.891903 0.679842 0.800245 0.7813996 0.848460 0.84639 0.835043 0.793731 0.7249767 0.7588379 0.817072 0.725980 0.593829 0.8067169 0.796863 0.821656 0.675921 0.829003 0.812093 0.674878 0.827646 0.698807 0.708915 0.843545 0.872872 0.824110 0.847381 0.0851514 0.1666927 0.1144386 0.00000000 0.348636 0.010352 0.744106 0.726066 0.715741 0.7102732 0.650989 3 0.78985 0.801688 -0.01385031 9 0.807207 0.806890 0.00031747 0.55120851 0.3025893 insignificant 1.00000 1 insignificant 1.3227e-01 0.74218976 insignificant 1.000000 1.00000 insignificant 0.03827869 0.3113318 insignificant 1.00000 insignificant 0.789850 0.087061 0.6993091 9 0.807207 0.079529 0.7276777 1.0542e-78 1.0000e+00 hypermethylated 2.6355e-76 1.0000e+00 hypermethylated 2.1229e-20 1.0000e+00 hypermethylated 4.2457e-18 1.0000e+00 hypermethylated 0.6981117 1.1505e-05 hypermethylated 8.2175e-04 hypermethylated 0.789850 0.761952 0.04829668 7 0.80721 0.75126 0.0559514 3.3732e-04 7.9376e-01 weaklyHypermeth 1.2047e-02 1.000000 weaklyHypermeth 9.2380e-02 7.0479e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02335714 3.7540e-01 insignificant 1.000000 insignificant 0.801688 0.087061 0.712436 9 0.80689 0.079529 0.727360 3.1267e-63 1.0000e+00 hypermethylated 1.0422e-60 1.0000e+00 hypermethylated 1.4235e-16 1.0000e+00 hypermethylated 2.8470e-14 1.0000e+00 hypermethylated 0.6598330 1.7327e-06 hypermethylated 1.9252e-04 hypermethylated 0.801688 0.761952 6.5512e-02 7 0.806890 0.75126 0.05563391 1.8826e-05 6.8489e-01 weaklyHypermeth 8.7697e-04 1.00000000 weaklyHypermeth 1.4461e-01 2.7821e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0149216 6.9567e-01 insignificant 1.000000 insignificant 0.087061 0.761952 -0.6585325 7 0.079529 0.75126 -0.6717263 1.0000e+00 7.1940e-35 hypomethylated 1.0000e+00 3.5870e-32 hypomethylated 1.0000e+00 7.6106e-11 hypomethylated 1.0000e+00 2.5369e-08 hypomethylated -0.67475455 1.3003e-05 hypomethylated 0.0065016 hypomethylated chr17 73873097 73874097 144629 SOCS3 ENSG00000184557 0.07860 326 8 0.05569 413 9 0.075901 484 9 0.120480 384 7 0.0037708 253 8 0.17670 814 9 0.120106 334 8 0.071382 452 9 0.015687 485 9 0.125998 425 9 0.094051 405 8 0.067105 286 9 0.026504 364 9 0.04826 223 7 0.010758 514 9 0.038149 271 9 0.0036014 282 4 0.070004 381 10 0.048015 575 8 0.083591 471 8 0.118988 206 7 0.083333 289 8 0.215604 290 8 0.105871 221 9 0.0405620 176 8 0.017182 482 9 0.074075 469 8 0.0014245 234 8 0.176014 388 8 0.171269 583 9 0.047119 860 9 0.10744 473 8 0.2089404 284 8 0.3601112 222 6 0.13865546 245 5 0.0000000 35 2 0.446726 190 9 0.2492209 473 9 0.084289 365 6 0.240300 376 6 0.0072965 262 5 0.05814 308 5 0.100734 387 7 0.039086 0.040125 0.047132 0.015153 0.008550 0.067581 0.019451 0.025845 0.0097176 0.032825 0.08757 0.031086 0.017432 0.0097894 0.0089546 0.017524 0.021021 0.046941 0.0066593 0.012639 0.045258 0.000000 0.081985 0.068152 0.036938 0.024455 0.023889 0.006734 0.037355 0.010962 0.013319 0.082127 0.2784962 0.3948038 0.2492557 0.00109456 0.529272 0.096392 0.026913 0.029329 0.010937 0.0034317 0.088326 5 0.03746 0.038107 -0.00027764 8 0.060813 0.095282 -0.03446870 0.37300392 0.8380328 insignificant 1.00000 1 insignificant 6.8466e-01 0.77659475 insignificant 1.000000 1.00000 insignificant -0.02985601 0.1863027 insignificant 1.00000 insignificant 0.037474 0.234645 -0.1954821 8 0.065881 0.263083 -0.1972014 9.9998e-01 1.7756e-13 weaklyHypometh 1.0000e+00 4.4391e-11 weaklyHypometh 9.9997e-01 1.2049e-03 weaklyHypometh 1.0000e+00 3.0124e-01 insignificant -0.1672248 4.8999e-02 weaklyHypometh 7.5094e-01 insignificant 0.037483 0.028269 0.00083744 5 0.07187 0.13190 -0.0600302 5.7591e-01 7.1818e-02 insignificant 1.0000e+00 1.000000 insignificant 6.8832e-01 7.2990e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03143423 4.7297e-01 insignificant 1.000000 insignificant 0.038124 0.234645 -0.194000 8 0.10322 0.263083 -0.159860 1.0000e+00 1.6664e-09 weaklyHypometh 1.0000e+00 4.1660e-07 weaklyHypometh 9.9976e-01 2.1393e-03 weaklyHypometh 1.0000e+00 5.3482e-01 insignificant -0.1373688 8.9067e-02 insignificant 1.0000e+00 insignificant 0.037736 0.028269 4.3146e-03 5 0.076243 0.13190 -0.05565811 7.6938e-01 8.0284e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.2942e-01 8.5230e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0015782 9.7213e-01 insignificant 1.000000 insignificant 0.234440 0.028269 0.2059134 5 0.256696 0.13190 0.1247956 1.7343e-03 9.9946e-01 weaklyHypermeth 1.4452e-01 1.0000e+00 insignificant 3.9244e-02 9.9986e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.13579060 1.1019e-01 insignificant 1.0000000 insignificant chr17 74391165 74392165 144633 USP36 ENSG00000055483 0.49545 660 18 0.44363 777 18 0.510822 862 18 0.370583 679 16 0.5132072 405 17 0.51481 1420 18 0.456313 584 18 0.387130 798 18 0.403064 775 19 0.470699 857 18 0.523483 719 18 0.479539 507 18 0.155678 864 18 0.56310 485 10 0.395069 1055 18 0.397880 505 17 0.3547489 425 18 0.253587 773 18 0.471555 800 18 0.389427 653 19 0.542325 249 16 0.178070 496 15 0.616999 609 18 0.380292 346 19 0.4890131 283 15 0.280847 1025 18 0.395654 557 19 0.2515787 421 18 0.481230 616 18 0.263515 1232 18 0.310274 1507 18 0.71830 762 19 0.0107353 752 18 0.0078302 360 18 0.00056561 819 15 0.0019157 192 15 0.034447 696 18 0.0633750 859 18 0.308817 817 18 0.163504 740 18 0.2254356 534 18 0.17401 682 18 0.212982 688 16 0.434160 0.440589 0.515597 0.392220 0.441613 0.539297 0.457521 0.393785 0.4135600 0.457961 0.58024 0.509936 0.155206 0.4810788 0.3446328 0.415105 0.298859 0.247837 0.4178346 0.342403 0.522628 0.164713 0.560323 0.436794 0.400338 0.310059 0.402479 0.324172 0.525022 0.266495 0.324778 0.698013 0.0063380 0.0121907 0.0020733 0.00094834 0.015952 0.010473 0.140672 0.171383 0.166218 0.1488398 0.157494 15 0.43926 0.409506 0.03020380 18 0.390404 0.362731 0.02767310 0.27435698 0.9656460 insignificant 1.00000 1 insignificant 5.8640e-01 0.96422752 insignificant 1.000000 1.00000 insignificant 0.01848066 0.7271427 insignificant 1.00000 insignificant 0.439372 0.011150 0.4222147 18 0.423965 0.024278 0.3996869 5.3553e-88 1.0000e+00 hypermethylated 2.6776e-85 1.0000e+00 hypermethylated 1.4119e-41 1.0000e+00 hypermethylated 1.4119e-38 1.0000e+00 hypermethylated 0.4076774 7.7984e-15 hypermethylated 3.8992e-12 hypermethylated 0.439230 0.185496 0.26622109 18 0.37414 0.31920 0.0549417 3.2107e-34 1.0000e+00 hypermethylated 1.6053e-31 1.000000 hypermethylated 5.3054e-26 1.0000e+00 hypermethylated 5.3054e-23 1.000000 hypermethylated 0.21053998 7.2775e-05 hypermethylated 0.010574 hypermethylated 0.409838 0.011147 0.389904 18 0.38537 0.023122 0.362250 4.1243e-53 1.0000e+00 hypermethylated 8.2485e-51 1.0000e+00 hypermethylated 1.5374e-33 1.0000e+00 hypermethylated 1.5374e-30 1.0000e+00 hypermethylated 0.3891967 3.5715e-06 hypermethylated 3.2468e-04 hypermethylated 0.409506 0.185549 2.3945e-01 18 0.362731 0.33307 0.02965740 6.1518e-18 1.0000e+00 hypermethylated 2.0506e-15 1.00000000 hypermethylated 2.3812e-18 1.0000e+00 hypermethylated 1.1906e-15 1.000000 hypermethylated 0.1920593 2.8222e-03 weaklyHypermeth 0.208867 insignificant 0.011150 0.184842 -0.1633135 18 0.024278 0.23303 -0.2087568 1.0000e+00 1.0761e-34 weaklyHypometh 1.0000e+00 3.5870e-32 weaklyHypometh 1.0000e+00 1.6092e-15 weaklyHypometh 1.0000e+00 1.6092e-12 weaklyHypometh -0.19713738 6.9984e-04 weaklyHypometh 0.0437398 weaklyHypometh chr17 74622151 74623151 144635 ENGASE ENSG00000167280 0.81503 297 12 0.81768 235 13 0.625379 230 12 0.699757 386 11 0.8060967 136 12 0.85294 497 12 0.804471 156 11 0.754037 241 12 0.724304 268 12 0.825940 307 13 0.762164 322 13 0.755417 210 10 0.724963 356 12 0.59569 163 10 0.744389 280 13 0.724766 186 9 0.7214648 123 9 0.610175 505 10 0.768750 361 13 0.785289 318 11 0.812614 88 9 0.513861 194 9 0.752745 193 11 0.694025 147 9 0.7548456 199 7 0.757790 343 13 0.670985 174 11 0.6109810 112 6 0.745988 251 13 0.738636 334 14 0.767323 487 13 0.92591 363 12 0.0800739 314 13 0.0206005 249 13 0.02568959 389 12 0.2000000 93 7 0.196489 229 12 0.2401968 478 13 0.448551 399 11 0.534379 379 11 0.5557715 309 10 0.44704 410 10 0.387095 338 11 0.767248 0.859094 0.688793 0.769129 0.904088 0.815152 0.908350 0.879474 0.8065323 0.846214 0.79677 0.826896 0.789639 0.6786405 0.8226692 0.790644 0.718027 0.686092 0.8326770 0.812200 0.823226 0.582396 0.771758 0.789365 0.808411 0.754058 0.715770 0.811023 0.768182 0.747206 0.799186 0.899080 0.0467448 0.0071125 0.0183939 0.08447021 0.070107 0.084289 0.575753 0.619478 0.649834 0.6874684 0.447527 6 0.76971 0.781282 -0.01728152 13 0.728323 0.707082 0.02124063 0.59345632 0.0887242 insignificant 1.00000 1 insignificant 2.7414e-01 0.27897984 insignificant 1.000000 1.00000 insignificant 0.01712681 0.6155639 insignificant 1.00000 insignificant 0.770474 0.074201 0.6855456 13 0.780406 0.146354 0.6340519 6.4473e-112 1.0000e+00 hypermethylated 6.4473e-109 1.0000e+00 hypermethylated 6.6486e-28 1.0000e+00 hypermethylated 3.3243e-25 1.0000e+00 hypermethylated 0.6187602 2.5091e-06 hypermethylated 2.7878e-04 hypermethylated 0.770392 0.526431 0.22586538 11 0.74430 0.47356 0.2707412 1.3194e-22 1.0000e+00 hypermethylated 4.3981e-20 1.000000 hypermethylated 1.7879e-14 1.0000e+00 hypermethylated 5.9597e-12 1.000000 hypermethylated 0.27136803 1.8603e-04 hypermethylated 0.020260 hypermethylated 0.782805 0.073227 0.696986 13 0.77238 0.095833 0.676546 1.1367e-75 1.0000e+00 hypermethylated 1.1367e-72 1.0000e+00 hypermethylated 5.0894e-22 1.0000e+00 hypermethylated 1.6965e-19 1.0000e+00 hypermethylated 0.6016333 1.3780e-07 hypermethylated 2.7561e-05 hypermethylated 0.781824 0.527005 2.5910e-01 11 0.754221 0.53670 0.21751669 5.1635e-17 1.0000e+00 hypermethylated 1.2909e-14 1.00000000 hypermethylated 1.8203e-09 1.0000e+00 hypermethylated 6.0675e-07 1.000000 hypermethylated 0.2542412 9.1403e-05 hypermethylated 0.018281 hypermethylated 0.073143 0.526459 -0.4309296 11 0.089444 0.47004 -0.3805931 1.0000e+00 2.0355e-31 hypomethylated 1.0000e+00 5.0886e-29 hypomethylated 1.0000e+00 1.5848e-10 hypomethylated 1.0000e+00 3.1696e-08 hypomethylated -0.34739212 7.4794e-05 hypomethylated 0.0126267 hypomethylated chr17 74655086 74656086 144636 ENGASE ENSG00000167280 0.90079 39 6 0.74581 109 5 0.867838 99 6 0.955357 80 6 0.9612795 70 9 0.96329 143 6 0.867901 92 9 0.879381 110 6 0.879630 52 6 0.943182 56 6 0.884157 170 9 0.766667 36 6 0.826190 29 2 0.98413 40 2 0.988095 38 2 0.777778 18 0 NA 0 0 0.844444 25 3 0.703704 53 6 0.912500 58 6 0.944444 27 2 0.800000 7 0 0.901515 85 6 0.900000 25 3 0.9621603 57 3 0.888252 201 6 0.842857 35 2 1.0000000 13 2 0.938725 65 6 0.950059 186 6 0.937305 280 6 0.94028 144 6 0.5574074 102 5 0.7014605 151 6 0.82311828 81 6 0.6552632 79 4 0.351651 52 5 0.8756127 216 6 0.870370 73 6 0.455026 63 6 0.7083333 38 4 0.75000 4 0 0.871795 65 4 0.950280 0.815888 0.918469 0.948529 0.967914 0.984655 0.958824 0.837714 0.9754902 0.937166 0.90466 0.858824 0.881633 0.9705882 0.9789916 1.000000 NA 0.823529 0.8529412 0.935294 0.907018 0.823529 0.905080 0.847059 0.939902 0.928674 0.852941 0.941332 0.930219 0.948970 0.895574 0.927081 0.6323529 0.5420107 0.7020873 0.58581102 0.516488 0.715804 0.862745 0.742647 0.977941 0.8492647 0.904223 0 0.90129 0.909172 -0.00251646 6 0.867437 0.922169 -0.05473224 0.89346555 0.0850149 insignificant 1.00000 1 insignificant 5.5228e-01 0.11450799 insignificant 1.000000 1.00000 insignificant -0.04070617 0.1101930 lowCoverage 1.00000 lowCoverage 0.901291 0.660793 0.2431533 6 0.867437 0.602385 0.2650520 4.5909e-14 1.0000e+00 hypermethylated 1.5303e-12 1.0000e+00 hypermethylated 5.0087e-06 9.9947e-01 hypermethylated 1.7119e-04 1.0000e+00 hypermethylated 0.2156748 3.7973e-02 weaklyHypermeth 6.1955e-01 insignificant 0.901291 0.786008 0.11754726 6 0.86744 0.76411 0.1033221 2.2848e-07 7.9069e-01 weaklyHypermeth 1.2694e-05 1.000000 weaklyHypermeth 3.0072e-03 6.6122e-01 weaklyHypermeth 1.3075e-01 1.000000 insignificant 0.14532209 1.3000e-01 lowCoverage 1.000000 lowCoverage 0.909172 0.660793 0.248571 6 0.92217 0.602385 0.319784 2.5502e-12 1.0000e+00 hypermethylated 9.4452e-11 1.0000e+00 hypermethylated 1.7524e-05 1.0000e+00 hypermethylated 7.0096e-04 1.0000e+00 hypermethylated 0.2563810 2.0466e-02 lowCoverage 3.8614e-01 lowCoverage 0.909172 0.786008 1.2719e-01 6 0.922169 0.76411 0.15805435 7.6436e-06 2.8231e-01 weaklyHypermeth 4.4963e-04 1.00000000 weaklyHypermeth 8.4384e-03 7.5249e-01 weaklyHypermeth 3.0137e-01 1.000000 insignificant 0.1860283 7.0118e-02 lowCoverage 1.000000 lowCoverage 0.660793 0.786008 -0.0913819 6 0.602385 0.76411 -0.1617299 8.0121e-01 2.0638e-03 weaklyHypometh 1.0000e+00 4.6904e-02 weaklyHypometh 8.7042e-01 9.1498e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07035275 5.3401e-01 lowCoverage 1.0000000 lowCoverage chr17 74700793 74701793 144638 ENGASE ENSG00000167280 0.15614 263 8 0.14489 225 8 0.188077 364 8 0.132522 195 6 0.0738673 244 8 0.16129 606 8 0.098109 318 8 0.079635 230 8 0.141813 341 8 0.083606 279 8 0.151201 363 8 0.265103 259 8 0.053385 341 8 0.17647 35 2 0.087466 289 8 0.175134 236 8 0.1827487 394 8 0.169439 222 8 0.210510 367 8 0.076533 383 8 0.114514 166 8 0.066098 121 6 0.086777 260 8 0.147529 157 8 0.0722222 61 6 0.043188 388 8 0.075932 119 7 0.0791893 117 7 0.077368 198 8 0.045088 376 8 0.097422 510 8 0.13870 390 8 0.0382873 304 8 0.0301901 200 8 0.04183429 275 6 0.0000000 55 4 0.072230 150 8 0.0730084 253 8 0.101463 268 8 0.116446 306 8 0.0395893 125 6 0.21241 281 6 0.103754 240 6 0.126038 0.130735 0.178449 0.052369 0.059559 0.128722 0.103122 0.101032 0.1287060 0.062117 0.12169 0.242947 0.041091 0.0888019 0.0916176 0.174829 0.161518 0.133971 0.1688175 0.063573 0.133658 0.074425 0.102945 0.132955 0.065081 0.036854 0.070272 0.063299 0.080765 0.039424 0.077062 0.132948 0.0105929 0.0353456 0.0343843 0.00000000 0.046273 0.021429 0.065987 0.098068 0.039508 0.1767313 0.080891 6 0.12210 0.088020 0.03626961 8 0.130738 0.091171 0.03956743 0.00019330 0.9999543 weaklyHypermeth 0.15571 1 insignificant 3.2116e-05 0.99967219 weaklyHypermeth 0.032116 1.00000 weaklyHypermeth 0.05339427 0.0016309 weaklyHypermeth 0.72512 insignificant 0.122103 0.055780 0.0619030 8 0.130738 0.047473 0.0832648 2.0972e-10 9.9810e-01 weaklyHypermeth 5.6682e-09 1.0000e+00 weaklyHypermeth 1.9812e-09 9.9995e-01 weaklyHypermeth 1.3208e-07 1.0000e+00 weaklyHypermeth 0.0978051 1.6068e-05 weaklyHypermeth 1.0712e-03 weaklyHypermeth 0.122103 0.106557 0.01117506 6 0.13074 0.12938 0.0013580 5.1086e-01 3.5504e-01 insignificant 1.0000e+00 1.000000 insignificant 3.8117e-01 5.9511e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02566371 4.3258e-01 insignificant 1.000000 insignificant 0.088020 0.055780 0.028254 8 0.09117 0.047473 0.043697 3.9272e-05 6.4842e-01 weaklyHypermeth 7.7004e-04 1.0000e+00 weaklyHypermeth 6.7317e-05 9.7074e-01 weaklyHypermeth 2.1019e-03 1.0000e+00 weaklyHypermeth 0.0444108 1.0711e-02 weaklyHypermeth 2.4909e-01 insignificant 0.088020 0.106557 -1.6100e-02 6 0.091171 0.12938 -0.03820942 9.8122e-01 2.5171e-04 weaklyHypometh 1.0000e+00 0.12585597 insignificant 9.7152e-01 3.1331e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0277306 3.8913e-01 insignificant 1.000000 insignificant 0.055780 0.106557 -0.0728184 6 0.047473 0.12938 -0.0819068 9.9993e-01 4.9431e-07 weaklyHypometh 1.0000e+00 2.2468e-05 weaklyHypometh 9.9989e-01 4.6012e-05 weaklyHypometh 1.0000e+00 2.6381e-03 weaklyHypometh -0.07214138 5.8503e-02 insignificant 1.0000000 insignificant chr17 74772858 74773858 144643 ENGASE ENSG00000167280 0.85750 92 6 0.89796 127 5 0.641095 168 6 1.000000 28 3 0.9210269 141 6 0.86831 98 5 0.864046 168 6 0.942261 146 6 0.882324 136 6 0.950397 84 5 0.914706 223 6 0.893504 114 5 0.928107 183 6 NA 0 0 0.872319 132 6 0.888829 149 5 0.8059524 147 5 0.704365 47 3 0.872833 220 6 0.821225 66 3 0.903490 97 6 0.400000 10 1 0.905556 74 6 0.959167 69 5 1.0000000 11 0 0.887867 184 6 0.936243 56 5 0.8883442 59 5 0.782778 137 6 0.880919 166 6 0.871591 211 6 0.94615 99 5 0.0035461 201 6 0.0256061 126 6 0.00000000 32 3 0.0151515 34 3 0.073095 65 6 0.0000000 184 6 0.252525 41 3 0.466435 88 5 0.6944444 28 2 0.52165 31 3 0.673016 32 5 0.885595 0.883986 0.575975 0.994888 0.913253 0.854606 0.850378 0.930601 0.8474370 0.960884 0.92129 0.864269 0.911541 NA 0.8538970 0.867321 0.729904 0.680697 0.8991828 0.881345 0.847960 0.511905 0.866667 0.933393 0.975074 0.873077 0.931954 0.900249 0.840525 0.857155 0.871342 0.941302 0.0053191 0.0519372 0.0030638 0.03354978 0.047282 0.000000 0.329468 0.477927 0.558333 0.5084744 0.675170 1 0.87161 0.897698 -0.03481448 6 0.870003 0.893047 -0.02304329 0.90274099 0.0139047 weaklyHypometh 1.00000 1 insignificant 7.7624e-01 0.00426085 weaklyHypometh 1.000000 0.66449 insignificant 0.00632082 0.8986693 lowCoverage 1.00000 lowCoverage 0.871608 0.020249 0.8442480 6 0.870003 0.021433 0.8485700 1.1940e-79 1.0000e+00 hypermethylated 3.9798e-77 1.0000e+00 hypermethylated 2.1545e-16 1.0000e+00 hypermethylated 3.0779e-14 1.0000e+00 hypermethylated 0.8502631 4.3196e-22 lowCoverage 4.3196e-19 lowCoverage 0.871608 0.495455 0.36379064 3 0.87000 0.51238 0.3576212 1.1829e-21 1.0000e+00 lowCoverage 2.9572e-19 1.000000 lowCoverage 1.5035e-08 1.0000e+00 lowCoverage 3.0070e-06 1.000000 lowCoverage 0.34821632 1.0561e-02 lowCoverage 0.310608 lowCoverage 0.897698 0.020249 0.876919 6 0.89305 0.021433 0.871613 2.0602e-62 1.0000e+00 hypermethylated 5.1504e-60 1.0000e+00 hypermethylated 2.3451e-13 1.0000e+00 hypermethylated 3.9085e-11 1.0000e+00 hypermethylated 0.8439423 2.6583e-10 lowCoverage 1.3292e-07 lowCoverage 0.897698 0.495455 3.9540e-01 3 0.893047 0.51238 0.38066445 3.2326e-22 1.0000e+00 lowCoverage 1.6163e-19 1.00000000 lowCoverage 8.8175e-07 1.0000e+00 lowCoverage 1.7635e-04 1.000000 lowCoverage 0.3418955 8.0898e-03 lowCoverage 0.337073 lowCoverage 0.020249 0.495455 -0.4752059 3 0.021433 0.51238 -0.4909488 1.0000e+00 1.4935e-17 lowCoverage 1.0000e+00 2.4892e-15 lowCoverage 1.0000e+00 3.6507e-08 lowCoverage 1.0000e+00 6.0846e-06 lowCoverage -0.50204675 2.9978e-03 lowCoverage 0.1110300 lowCoverage chr17 74943051 74944051 144648 ENGASE ENSG00000167280 0.83259 337 6 0.80776 250 6 0.827924 155 6 0.893016 317 6 0.6202316 108 6 0.87686 552 6 0.608272 178 6 0.901270 175 6 0.749132 111 6 0.950980 102 5 0.892584 254 6 0.732323 71 3 0.939034 114 6 0.78765 96 6 0.884403 123 6 0.466667 42 3 NA 0 0 0.880071 478 6 0.911577 384 6 0.858919 282 6 0.919753 64 6 0.946429 50 5 0.841080 168 6 0.587202 60 5 0.9131138 217 6 0.918376 265 6 0.888097 103 6 0.8894144 93 2 0.921120 274 6 0.905407 279 6 0.960514 453 6 0.85188 280 6 0.5896317 212 6 0.4177429 216 6 0.73815988 312 6 0.9547619 108 3 0.526086 271 6 0.7145360 316 6 0.890232 347 6 0.938948 314 6 0.8532040 265 6 0.46950 369 3 0.874400 281 6 0.852748 0.798161 0.812479 0.913696 0.806135 0.896443 0.784870 0.890354 0.8016825 0.890059 0.89959 0.789375 0.916396 0.9150756 0.8930737 0.733038 NA 0.885367 0.8680830 0.895264 0.898948 0.906678 0.865574 0.934284 0.947429 0.936818 0.869985 0.948332 0.884509 0.935668 0.949007 0.866707 0.7158421 0.4993733 0.4776530 0.91979204 0.685148 0.794405 0.919432 0.946959 0.902600 0.8146479 0.911396 3 0.86849 0.909170 -0.04424925 6 0.833798 0.822316 0.01148150 0.99054583 0.0036789 weaklyHypometh 1.00000 1 insignificant 9.8554e-01 0.00089906 weaklyHypometh 1.000000 0.29969 insignificant -0.06688658 0.1112174 insignificant 1.00000 insignificant 0.868491 0.639024 0.2135086 6 0.833798 0.556762 0.2770358 4.4630e-10 9.9998e-01 hypermethylated 1.1745e-08 1.0000e+00 hypermethylated 5.6699e-04 9.9988e-01 hypermethylated 1.2552e-02 1.0000e+00 hypermethylated 0.1548258 1.0506e-01 insignificant 1.0000e+00 insignificant 0.868491 0.918782 -0.04488665 6 0.83380 0.90231 -0.0685105 9.6659e-01 1.4732e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.1918e-01 1.7659e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.00638779 9.4617e-01 insignificant 1.000000 insignificant 0.909170 0.639024 0.258263 6 0.82232 0.556762 0.265554 4.3724e-10 9.9999e-01 hypermethylated 1.4575e-08 1.0000e+00 hypermethylated 4.6921e-06 1.0000e+00 hypermethylated 2.0400e-04 1.0000e+00 hypermethylated 0.2217124 3.3191e-02 weaklyHypermeth 5.6256e-01 insignificant 0.909170 0.918782 6.7515e-03 6 0.822316 0.90231 -0.07999199 4.4599e-01 5.3237e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.6706e-01 9.6560e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0732744 4.5176e-01 insignificant 1.000000 insignificant 0.639024 0.918782 -0.2529009 6 0.556762 0.90231 -0.3455462 9.9994e-01 3.5885e-04 hypomethylated 1.0000e+00 9.9681e-03 hypomethylated 9.7680e-01 1.0531e-02 weaklyHypometh 1.0000e+00 2.6328e-01 insignificant -0.14843805 2.2934e-01 insignificant 1.0000000 insignificant chr17 75048480 75049480 144651 ENSG00000167281 0.94334 240 4 0.91662 183 5 0.903044 83 5 0.917329 212 5 0.9491226 117 5 0.89421 400 5 0.928078 132 5 0.864230 111 5 0.950985 74 4 1.000000 48 3 0.939740 202 5 0.937500 52 4 0.934300 58 3 0.95130 56 3 0.746263 98 3 0.895833 30 2 NA 0 0 0.777441 484 3 0.968642 239 3 0.938986 228 3 0.894176 70 3 0.916667 27 2 0.952744 152 5 0.971429 87 5 0.9351774 109 4 0.953943 187 5 0.840244 103 3 0.9903846 61 2 0.929200 157 4 0.808691 189 5 0.935859 360 5 0.97749 224 5 0.7088235 135 5 0.6155495 176 3 0.30682743 284 3 0.4833333 76 3 0.734293 145 5 0.6218301 244 5 0.664692 233 5 0.858994 188 5 0.9459957 227 5 0.91679 325 3 0.847059 234 5 0.895159 0.902393 0.931615 0.947194 0.949159 0.949285 0.862268 0.879773 0.8940442 1.000000 0.93743 0.947487 0.895089 0.9603317 0.8789545 0.819300 NA 0.873113 0.9323244 0.969651 0.803808 0.855420 0.969696 0.999264 0.904866 0.943244 0.925792 0.980821 0.923392 0.963951 0.947372 0.958086 0.6645816 0.5353777 0.2069024 0.74269759 0.669140 0.520411 0.909804 0.891696 0.930376 0.9194136 0.934455 2 0.92083 0.940290 -0.02002352 5 0.939605 0.786412 0.15319280 0.99334351 0.1679472 insignificant 1.00000 1 insignificant 9.1123e-01 0.35487039 insignificant 1.000000 1.00000 insignificant -0.01197583 0.5757869 lowCoverage 1.00000 lowCoverage 0.920802 0.533522 0.4020323 5 0.927526 0.580407 0.3471188 8.2176e-23 1.0000e+00 hypermethylated 4.1088e-21 1.0000e+00 hypermethylated 5.9304e-09 1.0000e+00 hypermethylated 3.7065e-07 1.0000e+00 hypermethylated 0.3350814 3.1078e-03 lowCoverage 9.4175e-02 lowCoverage 0.920525 0.907960 0.01077467 5 0.85627 0.74424 0.1120303 4.8546e-02 7.0996e-01 weaklyHypermeth 8.3700e-01 1.000000 insignificant 1.6072e-01 9.2462e-01 insignificant 1.0000e+00 1.000000 insignificant 0.06681860 2.5073e-01 lowCoverage 1.000000 lowCoverage 0.940870 0.533962 0.412461 5 0.95308 0.650339 0.302740 7.9368e-16 1.0000e+00 hypermethylated 3.9684e-14 1.0000e+00 hypermethylated 1.1548e-07 1.0000e+00 hypermethylated 6.7928e-06 1.0000e+00 hypermethylated 0.3470573 2.5427e-03 lowCoverage 7.7050e-02 lowCoverage 0.940870 0.907960 3.5312e-02 5 0.953079 0.74424 0.20883748 4.7019e-03 9.9095e-01 weaklyHypermeth 1.1468e-01 1.00000000 insignificant 3.0420e-02 9.7308e-01 weaklyHypermeth 8.4500e-01 1.000000 insignificant 0.0787944 1.8824e-01 lowCoverage 1.000000 lowCoverage 0.533962 0.907960 -0.3806440 5 0.650339 0.74424 -0.0939021 9.9999e-01 8.6005e-06 hypomethylated 1.0000e+00 3.0716e-04 hypomethylated 9.9943e-01 1.0008e-03 weaklyHypometh 1.0000e+00 3.5742e-02 weaklyHypometh -0.26826284 9.7338e-03 lowCoverage 0.2703825 lowCoverage chr17 75294826 75295826 144654 ENSG00000214105 0.87145 731 16 0.79301 470 16 0.863337 591 16 0.915667 748 15 0.8860998 364 16 0.83423 1316 18 0.861798 509 16 0.791275 590 16 0.879963 624 16 0.910538 584 16 0.863820 762 16 0.844715 301 14 0.853726 809 15 0.91902 386 11 0.905743 773 15 0.872845 225 11 0.7237536 216 9 0.852767 846 15 0.938756 610 15 0.783757 895 16 0.855599 193 15 0.818022 427 15 0.818471 612 16 0.782578 262 16 0.9154756 228 14 0.928094 616 15 0.857589 475 15 0.8109231 325 12 0.885755 546 15 0.877982 621 15 0.865720 792 16 0.92411 877 16 0.5756454 556 16 0.6130237 441 15 0.49407604 574 12 0.8216903 211 12 0.595748 397 15 0.7524792 635 15 0.826304 777 15 0.880926 633 15 0.8849523 543 15 0.77181 697 15 0.895340 645 15 0.920350 0.867748 0.860939 0.922654 0.915298 0.904723 0.855748 0.903296 0.8772853 0.928303 0.90497 0.874993 0.913037 0.9057591 0.9038322 0.905429 0.785850 0.896968 0.9346674 0.863305 0.942542 0.798537 0.892590 0.893251 0.922913 0.920078 0.884239 0.883943 0.897143 0.898961 0.907489 0.917207 0.6055890 0.6319913 0.6372886 0.86819669 0.717693 0.759981 0.848353 0.884106 0.883092 0.8872428 0.894770 15 0.89287 0.892014 -0.00526612 16 0.785042 0.816666 -0.03162457 0.68514801 0.2592095 insignificant 1.00000 1 insignificant 7.3561e-01 0.31165860 insignificant 1.000000 1.00000 insignificant -0.00337972 0.8533820 insignificant 1.00000 insignificant 0.892874 0.632065 0.2392647 15 0.785042 0.604233 0.1808088 8.8307e-47 9.9982e-01 hypermethylated 1.0377e-44 1.0000e+00 hypermethylated 1.3519e-12 9.7176e-01 hypermethylated 1.6899e-10 1.0000e+00 hypermethylated 0.2162034 6.3884e-03 weaklyHypermeth 1.6380e-01 insignificant 0.892947 0.859181 0.01450231 15 0.82636 0.82377 0.0025851 6.7363e-04 4.8918e-01 weaklyHypermeth 2.1381e-02 1.000000 weaklyHypermeth 8.4074e-03 5.7287e-01 weaklyHypermeth 3.0026e-01 1.000000 insignificant 0.00644657 8.1334e-01 insignificant 1.000000 insignificant 0.892032 0.631841 0.241510 15 0.82540 0.575460 0.249936 1.2324e-29 9.9813e-01 hypermethylated 1.5405e-27 1.0000e+00 hypermethylated 3.0905e-11 9.9890e-01 hypermethylated 3.8632e-09 1.0000e+00 hypermethylated 0.2195831 5.7457e-03 weaklyHypermeth 1.5960e-01 insignificant 0.892127 0.859181 2.3340e-02 15 0.824561 0.82377 0.00078638 1.4488e-02 6.3240e-01 weaklyHypermeth 3.1496e-01 1.00000000 insignificant 1.5080e-01 8.2272e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0098263 7.2727e-01 insignificant 1.000000 insignificant 0.631935 0.859181 -0.2229392 15 0.583403 0.82377 -0.2403715 9.9999e-01 3.2678e-13 hypomethylated 1.0000e+00 2.9707e-11 hypomethylated 9.9992e-01 1.6839e-06 hypomethylated 1.0000e+00 1.8710e-04 hypomethylated -0.20975683 6.4270e-03 weaklyHypometh 0.2008431 insignificant chr17 76037937 76038937 144656 ENSG00000173818 0.81095 237 12 0.73447 363 12 0.725936 396 12 0.889610 331 12 0.8933643 207 12 0.83894 722 12 0.700038 188 12 0.821437 376 12 0.829621 247 11 0.879312 300 11 0.906759 392 13 0.775116 113 8 0.794764 344 11 0.91292 163 7 0.873094 352 11 0.876628 94 8 0.7484418 68 6 0.779204 329 9 0.917343 600 12 0.572131 219 6 0.876122 198 11 0.752916 181 11 0.822709 206 12 0.873364 167 8 0.9081053 263 11 0.845569 404 12 0.875835 316 11 0.7064605 160 12 0.767498 237 9 0.772507 467 12 0.816772 334 12 0.80606 357 12 0.4694012 312 12 0.5103438 251 12 0.39210526 259 6 0.6230159 158 9 0.478808 271 12 0.5991159 275 12 0.831226 181 10 0.708752 288 12 0.8696665 207 9 0.80563 241 9 0.847442 269 9 0.754828 0.833955 0.730806 0.893696 0.878415 0.862437 0.728319 0.860234 0.8769502 0.897771 0.89272 0.751335 0.831845 0.8563856 0.8923449 0.853962 0.770989 0.821008 0.9046995 0.712681 0.873918 0.799991 0.894398 0.863279 0.868624 0.862589 0.860198 0.876077 0.876152 0.827533 0.834077 0.863715 0.5293051 0.5709018 0.6454862 0.64693058 0.646296 0.551768 0.790873 0.829457 0.812114 0.8175583 0.836104 5 0.85577 0.862405 -0.00998377 12 0.789424 0.849992 -0.06056821 0.92452827 0.5509861 insignificant 1.00000 1 insignificant 9.8114e-01 0.33786564 insignificant 1.000000 1.00000 insignificant -0.00465595 0.8605231 insignificant 1.00000 insignificant 0.855581 0.484928 0.3177707 12 0.730601 0.450058 0.2805424 5.9272e-47 9.9998e-01 hypermethylated 9.2686e-45 1.0000e+00 hypermethylated 2.6039e-12 9.9994e-01 hypermethylated 2.8932e-10 1.0000e+00 hypermethylated 0.3018725 5.4904e-05 hypermethylated 3.2297e-03 hypermethylated 0.855889 0.806914 0.03342617 11 0.82801 0.74952 0.0784941 1.5196e-03 9.9388e-01 weaklyHypermeth 4.2250e-02 1.000000 weaklyHypermeth 2.3212e-01 7.7745e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00146006 9.6692e-01 insignificant 1.000000 insignificant 0.862363 0.485246 0.322578 12 0.84062 0.478187 0.362430 1.0493e-38 9.9556e-01 hypermethylated 1.7489e-36 1.0000e+00 hypermethylated 6.3529e-11 9.9889e-01 hypermethylated 6.3529e-09 1.0000e+00 hypermethylated 0.3065285 7.1944e-05 hypermethylated 4.7963e-03 hypermethylated 0.862321 0.806914 3.7152e-02 11 0.829991 0.74952 0.08047136 4.1905e-03 9.9379e-01 weaklyHypermeth 1.0654e-01 1.00000000 insignificant 1.0086e-01 9.8398e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0061160 8.5784e-01 insignificant 1.000000 insignificant 0.485883 0.806751 -0.2745208 11 0.546499 0.73163 -0.1851293 9.9877e-01 6.1584e-16 hypomethylated 1.0000e+00 7.6980e-14 hypomethylated 9.9867e-01 2.4962e-06 hypomethylated 1.0000e+00 2.4962e-04 hypomethylated -0.30041246 9.6455e-05 hypomethylated 0.0132676 hypomethylated chr17 76713803 76714803 144660 MIR338 ENSG00000211563 0.88193 294 10 0.47422 347 10 0.646954 284 10 0.732916 392 10 0.6700046 165 6 0.81737 839 10 0.821847 228 7 0.834333 253 10 0.718224 224 10 0.800496 227 9 0.778864 452 10 0.741622 102 8 0.691058 281 10 0.64983 137 7 0.813772 200 7 0.428571 85 5 0.4818182 23 2 0.778294 484 10 0.827260 518 10 0.780234 436 10 0.764872 234 10 0.780946 111 5 0.862279 278 10 0.922302 172 9 0.8628600 97 10 0.805254 418 10 0.684324 261 10 0.5939051 140 7 0.782565 360 10 0.620214 405 10 0.759453 571 10 0.88139 488 10 0.3595060 423 10 0.4039085 340 10 0.51659808 302 8 0.5009091 70 5 0.330984 306 10 0.7209261 479 10 0.736188 449 10 0.821809 439 10 0.7368697 291 10 0.73478 579 10 0.733304 375 10 0.888870 0.565257 0.750129 0.797816 0.838517 0.890365 0.842913 0.828840 0.7587599 0.893051 0.86547 0.816538 0.722586 0.8007882 0.8075067 0.533822 NA 0.719612 0.8251252 0.812018 0.844539 0.808883 0.873331 0.902214 0.843384 0.801677 0.797744 0.768083 0.842056 0.773167 0.757890 0.883962 0.3151793 0.2447779 0.2332739 0.30985065 0.228274 0.725420 0.757092 0.807203 0.821408 0.7688913 0.748226 7 0.80462 0.822864 -0.01804851 10 0.713349 0.738317 -0.02496748 0.97150557 0.0926362 insignificant 1.00000 1 insignificant 9.9301e-01 0.03673676 weaklyHypometh 1.000000 1.00000 insignificant -0.05821637 0.1681517 insignificant 1.00000 insignificant 0.804760 0.401460 0.4314840 10 0.772795 0.486313 0.2864815 3.2583e-29 9.9478e-01 hypermethylated 2.3274e-27 1.0000e+00 hypermethylated 2.4889e-10 9.9098e-01 hypermethylated 2.4889e-08 1.0000e+00 hypermethylated 0.2463420 5.8331e-03 weaklyHypermeth 1.5350e-01 insignificant 0.804792 0.773090 0.03236899 10 0.79027 0.78732 0.0029485 2.6147e-01 7.5569e-01 insignificant 1.0000e+00 1.000000 insignificant 2.9281e-01 6.2496e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03410976 3.1989e-01 insignificant 1.000000 insignificant 0.823147 0.401042 0.417924 10 0.81524 0.448905 0.366335 2.0731e-23 9.9862e-01 hypermethylated 1.5947e-21 1.0000e+00 hypermethylated 6.0158e-11 9.9958e-01 hypermethylated 6.3529e-09 1.0000e+00 hypermethylated 0.3045583 1.8209e-03 weaklyHypermeth 6.0697e-02 weaklyHypermeth 0.823097 0.772770 4.3780e-02 10 0.799843 0.76960 0.03024230 7.1305e-03 9.5016e-01 weaklyHypermeth 1.6582e-01 1.00000000 insignificant 1.4678e-02 8.6089e-01 weaklyHypermeth 4.7349e-01 1.000000 insignificant 0.0241066 4.9147e-01 insignificant 1.000000 insignificant 0.401460 0.772770 -0.3943719 10 0.486313 0.76960 -0.2832873 9.9904e-01 9.3646e-11 hypomethylated 1.0000e+00 6.2430e-09 hypomethylated 9.9933e-01 1.2314e-06 hypomethylated 1.0000e+00 1.5392e-04 hypomethylated -0.28045173 3.8680e-03 weaklyHypometh 0.1274601 insignificant chr17 76905843 76906843 144661 C17orf55 ENSG00000185168 0.47713 309 10 0.39736 306 7 0.359217 325 11 0.452586 253 10 0.3840226 191 7 0.40169 559 10 0.465153 243 10 0.404129 261 10 0.364045 254 10 0.376699 295 11 0.479171 342 11 0.564403 156 9 0.360530 236 10 0.12244 118 4 0.459332 309 10 0.378472 146 4 0.6011533 106 8 0.526473 361 10 0.308969 536 10 0.388038 410 11 0.561002 215 10 0.361373 108 6 0.387670 202 10 0.385530 169 10 0.4764103 80 6 0.329886 397 10 0.422183 403 10 0.2675024 113 7 0.414822 308 9 0.350151 518 10 0.373831 650 10 0.60533 372 11 0.4367602 283 11 0.3959917 384 10 0.33333333 106 7 0.4296569 92 6 0.638846 253 10 0.4384706 399 10 0.443790 414 10 0.461800 400 10 0.3859724 214 10 0.47177 398 10 0.379319 307 10 0.294518 0.278816 0.288681 0.305867 0.284130 0.380209 0.338351 0.298688 0.2214017 0.300778 0.39490 0.444247 0.243715 0.3151323 0.2843126 0.315773 0.330123 0.308668 0.2258110 0.245288 0.342105 0.225227 0.308272 0.309005 0.325077 0.246397 0.252624 0.227941 0.275234 0.208795 0.247078 0.546608 0.4660369 0.2845649 0.3528345 0.41251774 0.530253 0.372455 0.239557 0.299293 0.234580 0.3018390 0.263550 7 0.29834 0.282073 0.02211242 10 0.408892 0.381712 0.02717982 0.27378807 0.9613142 insignificant 1.00000 1 insignificant 2.7597e-01 0.99501045 insignificant 1.000000 1.00000 insignificant 0.00224292 0.9503724 insignificant 1.00000 insignificant 0.298390 0.375578 -0.0664694 10 0.442966 0.457137 -0.0141712 2.2756e-02 3.0396e-04 weaklyHypometh 2.6460e-01 5.0661e-02 weaklyHypometh 2.1789e-01 8.4942e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0319590 5.2092e-01 insignificant 1.0000e+00 insignificant 0.298390 0.355453 0.03537421 10 0.44297 0.47327 -0.0303052 6.0908e-02 4.3471e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9720e-02 9.1041e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01497933 6.2086e-01 insignificant 1.000000 insignificant 0.282720 0.375989 -0.085602 10 0.42017 0.498896 -0.078722 3.0809e-01 6.7223e-03 weaklyHypometh 1.0000e+00 7.4692e-01 insignificant 6.1368e-01 3.3970e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0342019 5.1215e-01 insignificant 1.0000e+00 insignificant 0.282473 0.355453 1.0290e-02 10 0.413521 0.47327 -0.05974998 6.1150e-01 4.8652e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.0145e-01 5.7039e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0172222 6.1667e-01 insignificant 1.000000 insignificant 0.375578 0.355453 0.0954038 10 0.457137 0.47327 -0.0161339 2.6026e-02 2.4517e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.7748e-02 2.2212e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.01697963 7.2401e-01 insignificant 1.0000000 insignificant chr17 77457897 77458897 144664 NPB ENSG00000183979 0.93081 367 11 0.92642 220 8 0.892296 204 11 0.929719 376 12 0.8528220 119 9 0.87926 677 13 0.863787 192 10 0.827253 194 8 0.822684 183 10 0.967384 221 11 0.859411 392 13 0.760937 130 10 0.929965 219 11 0.89025 56 6 0.852558 214 11 0.673160 65 5 0.7024808 128 7 0.904071 537 11 0.855269 319 11 0.926445 317 9 0.947964 139 8 0.856286 147 6 0.812911 254 11 0.892940 156 11 0.8544862 106 6 0.907921 317 10 0.900738 221 10 0.8465278 145 10 0.898232 245 11 0.879462 368 11 0.856233 404 10 0.86881 502 11 0.8131131 219 8 0.8214217 193 8 0.83783784 131 4 0.9732232 101 7 0.817862 220 8 0.8997425 305 8 0.913777 343 11 0.960105 409 11 0.9455775 270 9 0.95975 373 9 0.950759 409 13 0.894910 0.861795 0.887860 0.907609 0.883692 0.879324 0.948489 0.893116 0.9259207 0.930679 0.89704 0.783883 0.934416 0.9071436 0.8533502 0.659834 0.742881 0.878614 0.8899327 0.876401 0.963921 0.927273 0.956414 0.893798 0.848732 0.909970 0.874085 0.969181 0.867479 0.914294 0.925912 0.892888 0.7789820 0.7821797 0.9213536 0.96948140 0.895281 0.806910 0.946021 0.926751 0.916189 0.9333695 0.926104 4 0.89649 0.910120 -0.01488852 11 0.854862 0.819328 0.03553328 0.80641881 0.2388047 insignificant 1.00000 1 insignificant 7.6896e-01 0.24831750 insignificant 1.000000 1.00000 insignificant -0.01452741 0.4720230 insignificant 1.00000 insignificant 0.896626 0.837468 0.0580109 8 0.868304 0.817579 0.0507252 8.5310e-02 2.4946e-01 insignificant 8.7948e-01 1.0000e+00 insignificant 8.0740e-01 1.1217e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0018154 9.5473e-01 insignificant 1.0000e+00 insignificant 0.896491 0.940687 -0.03791542 9 0.85486 0.95289 -0.0980257 9.9992e-01 1.0870e-02 weaklyHypometh 1.0000e+00 0.917214 insignificant 9.9994e-01 2.0154e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.08364426 2.2345e-04 weaklyHypometh 0.020313 weaklyHypometh 0.911333 0.837468 0.075897 8 0.87785 0.817579 0.060273 1.0002e-01 4.8301e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8296e-01 3.6791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0163428 5.7851e-01 insignificant 1.0000e+00 insignificant 0.910120 0.940687 -1.9515e-02 9 0.819328 0.95289 -0.13355894 9.9881e-01 2.9649e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9349e-01 3.3592e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0691169 1.4845e-04 weaklyHypometh 0.024741 weaklyHypometh 0.837468 0.940654 -0.0899354 6 0.817579 0.94952 -0.1319432 9.6080e-01 1.3038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1097e-01 5.1181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08545969 2.0440e-02 weaklyHypometh 0.4645359 insignificant chr18 5388869 5389869 144814 ZFP161 ENSG00000198081 0.91372 251 6 0.88123 221 6 0.881760 106 6 0.954062 202 6 0.8482143 43 4 0.91808 334 6 0.875000 39 5 0.955628 164 6 0.880556 87 6 0.910723 138 6 0.887636 254 6 0.676190 31 5 0.951821 175 6 0.89713 99 6 0.811058 145 6 0.841667 52 6 0.7500000 6 0 0.963424 197 6 0.844710 208 6 0.982096 185 6 0.993590 61 5 0.794016 97 6 0.815476 99 6 0.752333 92 4 0.9619048 87 6 0.969121 279 6 0.805557 150 6 0.9239042 56 6 0.935564 154 6 0.960494 291 6 0.949672 232 6 0.94609 242 6 0.9819820 173 6 0.8953638 72 6 1.00000000 149 1 1.0000000 23 1 0.840116 87 6 0.9763957 173 6 0.974071 179 6 0.941307 183 6 0.9547052 200 6 0.99425 120 6 0.961267 162 6 0.914880 0.886904 0.884560 0.957023 0.853324 0.919904 0.874738 0.953160 0.8861785 0.912689 0.88850 0.685355 0.949901 0.8947018 0.9455211 0.835744 0.792742 0.964461 0.9579519 0.977063 0.992501 0.922897 0.953092 0.876151 0.957652 0.966113 0.934845 0.900954 0.933843 0.951077 0.944716 0.945993 0.9789223 0.8935331 NA 1.00000000 0.928823 0.978599 0.973180 0.940039 0.953665 0.9932769 0.964738 3 0.92033 0.938043 -0.01815731 6 0.724592 0.796558 -0.07196570 0.87149004 0.0674218 insignificant 1.00000 1 insignificant 9.8943e-01 0.14455028 insignificant 1.000000 1.00000 insignificant -0.01940819 0.5140387 insignificant 1.00000 insignificant 0.920640 0.966027 -0.0429590 6 0.815167 0.899202 -0.0840353 9.8811e-01 7.4879e-03 weaklyHypometh 1.0000e+00 5.0455e-01 insignificant 9.9906e-01 3.1858e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0677408 6.0370e-02 lowCoverage 8.6242e-01 lowCoverage 0.920900 0.964455 -0.04355034 6 0.92022 0.96453 -0.0443115 9.9979e-01 8.5973e-03 weaklyHypometh 1.0000e+00 0.859730 insignificant 9.9986e-01 7.8548e-03 weaklyHypometh 1.0000e+00 0.654570 insignificant -0.08388525 1.9311e-04 weaklyHypometh 0.020260 weaklyHypometh 0.938998 0.966027 -0.025544 6 0.83363 0.899202 -0.065574 9.5399e-01 4.9156e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9803e-01 1.1183e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0483326 2.0478e-01 lowCoverage 1.0000e+00 lowCoverage 0.940919 0.964455 -2.3791e-02 6 0.944837 0.96453 -0.01969626 9.7787e-01 9.0219e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8731e-01 1.9407e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0644771 2.5544e-02 weaklyHypometh 0.823996 insignificant 0.968657 0.964455 0.0014997 6 0.962825 0.96453 -0.0017089 5.8772e-01 6.9360e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7074e-01 9.0028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01614443 5.9011e-01 lowCoverage 1.0000000 lowCoverage chr18 6451823 6452823 144846 ENSG00000199272 0.88634 373 5 0.83466 397 5 0.822024 197 5 0.745402 380 5 0.8977160 110 5 0.87942 467 5 0.899469 157 5 0.854531 258 5 0.893028 221 5 0.928790 156 5 0.836996 333 5 0.840970 114 5 0.935515 256 5 0.91460 176 5 0.874345 323 5 0.865944 129 5 0.6666667 3 0 0.895684 415 5 0.915592 249 5 0.928542 289 5 0.847619 54 5 0.903141 121 5 0.890645 172 5 0.827733 102 5 0.9262271 54 5 0.934319 371 5 0.797673 94 5 0.7900484 95 5 0.895560 227 5 0.937804 389 5 0.946003 271 5 0.76901 282 5 0.6421883 229 5 0.7533333 66 5 0.54006190 257 5 0.8666667 11 0 0.808614 250 5 0.8536556 229 5 0.929733 392 5 0.907852 268 5 0.9070969 425 5 0.92712 271 5 0.974959 334 5 0.882232 0.832626 0.808473 0.886134 0.909277 0.876637 0.901202 0.847201 0.8898580 0.922834 0.83356 0.838536 0.929080 0.9155089 0.8721069 0.889182 0.744550 0.889674 0.9148643 0.904380 0.848179 0.898470 0.877389 0.806250 0.915951 0.931960 0.812394 0.913174 0.883072 0.935653 0.949426 0.862272 0.6331111 0.7292157 0.6254916 0.85098039 0.795838 0.850165 0.925239 0.898420 0.897965 0.9220451 0.971514 5 0.87967 0.905018 -0.02513360 5 0.842331 0.789270 0.05306069 0.95981543 0.0642203 insignificant 1.00000 1 insignificant 8.4983e-01 0.29760152 insignificant 1.000000 1.00000 insignificant -0.00633646 0.7883931 lowCoverage 1.00000 lowCoverage 0.879800 0.708253 0.1720259 5 0.879263 0.707963 0.1713006 1.1847e-08 1.0000e+00 weaklyHypermeth 2.7551e-07 1.0000e+00 weaklyHypermeth 6.4873e-03 9.8532e-01 weaklyHypermeth 1.1584e-01 1.0000e+00 insignificant 0.1217255 6.9229e-02 lowCoverage 9.2306e-01 lowCoverage 0.879800 0.930178 -0.05068092 5 0.87926 0.92964 -0.0503728 9.9981e-01 1.2902e-04 weaklyHypometh 1.0000e+00 0.064510 weaklyHypometh 9.9688e-01 9.9465e-05 weaklyHypometh 1.0000e+00 0.049732 weaklyHypometh -0.06354062 4.1761e-03 lowCoverage 0.208805 lowCoverage 0.905745 0.708253 0.197904 5 0.90498 0.707963 0.197016 1.7701e-06 9.9999e-01 weaklyHypermeth 4.3172e-05 1.0000e+00 weaklyHypermeth 1.0316e-03 9.7513e-01 weaklyHypermeth 2.2924e-02 1.0000e+00 weaklyHypermeth 0.1280620 5.9790e-02 lowCoverage 8.3042e-01 lowCoverage 0.905745 0.930178 -2.5483e-02 5 0.904978 0.92964 -0.02465777 9.7707e-01 1.8886e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8284e-01 8.6139e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0572042 2.0311e-02 weaklyHypometh 0.677021 insignificant 0.708253 0.930178 -0.2231998 5 0.707963 0.92964 -0.2216734 9.9999e-01 2.2316e-04 hypomethylated 1.0000e+00 6.7623e-03 hypomethylated 9.9975e-01 1.3826e-03 weaklyHypometh 1.0000e+00 4.6087e-02 weaklyHypometh -0.18526612 1.5952e-02 lowCoverage 0.3988036 lowCoverage chr18 7360268 7361268 144867 ENSG00000212626 0.82819 225 6 0.83072 221 8 0.789555 159 6 0.883470 151 6 0.9638322 96 6 0.80741 334 8 0.766745 168 6 0.810793 150 8 0.721465 166 6 0.821454 184 6 0.921720 205 8 0.767540 92 6 0.901251 257 8 0.86859 84 3 0.895852 229 6 0.868783 61 6 0.7978480 51 6 0.783119 213 6 0.855438 160 7 0.851980 363 7 0.832753 71 5 0.623505 132 6 0.784870 222 6 0.845119 92 7 0.8044534 58 4 0.873115 237 8 0.886365 119 7 0.6651340 105 6 0.910166 155 7 0.934961 319 8 0.898106 275 8 0.81872 306 8 0.2679729 250 8 0.1240873 162 8 0.18750000 123 4 0.3489583 58 6 0.154488 184 7 0.5149897 270 8 0.693073 184 6 0.801267 230 6 0.8410369 184 6 0.63995 177 6 0.694188 241 6 0.853466 0.874474 0.848676 0.931375 0.935205 0.825329 0.892446 0.858982 0.8215559 0.921666 0.93653 0.725778 0.910245 0.8765590 0.8741192 0.851204 0.871653 0.767481 0.8786564 0.895746 0.855321 0.662088 0.891767 0.799373 0.827624 0.943074 0.853138 0.894609 0.892186 0.923465 0.930488 0.942840 0.3242947 0.0615775 0.3161967 0.41370011 0.177411 0.577272 0.773392 0.745326 0.813386 0.6869943 0.706333 6 0.86299 0.884744 -0.02789639 6 0.830584 0.850695 -0.02011174 0.96914915 0.0851317 insignificant 1.00000 1 insignificant 8.5039e-01 0.50097920 insignificant 1.000000 1.00000 insignificant 0.01368246 0.6596465 insignificant 1.00000 insignificant 0.862987 0.329513 0.5267333 6 0.830584 0.258480 0.5721039 6.4880e-47 1.0000e+00 hypermethylated 9.2686e-45 1.0000e+00 hypermethylated 9.3816e-17 1.0000e+00 hypermethylated 1.5636e-14 1.0000e+00 hypermethylated 0.5704551 1.4358e-04 hypermethylated 7.8510e-03 hypermethylated 0.863114 0.742126 0.12151186 6 0.84066 0.73335 0.1073085 3.5530e-12 9.9765e-01 weaklyHypermeth 3.2300e-10 1.000000 weaklyHypermeth 3.5254e-07 9.6243e-01 weaklyHypermeth 4.4068e-05 1.000000 weaklyHypermeth 0.10288425 4.8493e-02 weaklyHypermeth 1.000000 insignificant 0.884744 0.329513 0.550764 8 0.85070 0.258480 0.592216 1.2505e-33 1.0000e+00 hypermethylated 1.7864e-31 1.0000e+00 hypermethylated 8.3028e-13 1.0000e+00 hypermethylated 1.1861e-10 1.0000e+00 hypermethylated 0.5567726 5.5612e-05 hypermethylated 4.2778e-03 hypermethylated 0.885002 0.742126 1.4733e-01 6 0.863282 0.73335 0.12993421 1.0893e-09 9.9968e-01 weaklyHypermeth 1.3616e-07 1.00000000 weaklyHypermeth 7.0928e-05 9.6148e-01 weaklyHypermeth 7.0928e-03 1.000000 weaklyHypermeth 0.0892018 8.8718e-02 insignificant 1.000000 insignificant 0.329828 0.742126 -0.4042882 6 0.290790 0.73335 -0.4425584 1.0000e+00 7.7907e-12 hypomethylated 1.0000e+00 5.5648e-10 hypomethylated 1.0000e+00 2.5102e-07 hypomethylated 1.0000e+00 3.5860e-05 hypomethylated -0.46757082 1.5508e-04 hypomethylated 0.0155082 hypomethylated chr18 13533820 13534820 145018 C18orf1 ENSG00000168675 0.89187 286 6 NA 0 0 NA 0 0 0.86905 134 6 NA 0 0 0.97573 142 6 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.86827 419 6 0.95912 132 4 0.91709 71 4 NA 0 0 NA 0 0 1.00000 16 2 NA 0 0 NA 0 0 0.95544 90 6 NA 0 0 NA 0 0 NA 0 0 0.91587 71 6 0.93277 83 6 0.91773 137 6 NA 0 0 NA 0 0 0.56745 391 6 0.879397 237 6 NA 0 0 0.812500 120 6 0.86072 169 6 0.92359 155 6 0.72472 271 6 0.86934 233 5 0.88233 161 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.91878 0.93687 -0.0207335 4 0.90753 0.93741 -0.029880 0.88968 0.1172798 lowCoverage 1 1.00000 lowCoverage 0.98365 0.142100 lowCoverage 1 1 lowCoverage -0.030839 0.237012 lowCoverage 1 lowCoverage 0.91878 0.77941 0.088541 4 0.90753 0.68220 0.225321 1.4707e-03 0.89294 lowCoverage 5.6564e-02 1 lowCoverage 2.0797e-01 0.80259 lowCoverage 1.0000e+00 1 lowCoverage 0.160409 2.2974e-01 lowCoverage 1.0000e+00 lowCoverage 0.91878 0.91498 -0.0062912 4 0.90753 0.87160 0.035926 1.3806e-01 0.420288 lowCoverage 1.0000e+00 1 lowCoverage 3.0841e-01 0.294391 lowCoverage 1.000000 1 lowCoverage 0.0613822 0.158844 lowCoverage 1 lowCoverage 0.93687 0.77941 0.185844 4 0.93741 0.68220 0.255201 5.4292e-04 0.95260 lowCoverage 2.3605e-02 1 lowCoverage 1.0710e-01 0.95405 lowCoverage 1.0000e+00 1 lowCoverage 0.191248 1.7822e-01 lowCoverage 1.0000e+00 lowCoverage 0.93687 0.91498 0.04129152 4 0.93741 0.87160 0.0658059 4.0943e-03 0.81380 lowCoverage 3.1577e-01 1 lowCoverage 1.6850e-02 0.88015 lowCoverage 1.0000000 1 lowCoverage 0.0922213 0.049817 lowCoverage 1 lowCoverage 0.77941 0.91498 -0.126463 6 0.68220 0.87160 -0.189395 0.99247 6.5042e-03 weaklyHypometh 1 3.0972e-01 insignificant 0.98734 2.0187e-01 insignificant 1 1.0000e+00 insignificant -0.099027 0.40997519 lowCoverage 1.00000 lowCoverage chr18 14368459 14369459 145029 ENSG00000187589 0.81994 663 11 0.65717 238 7 0.35185 59 4 0.93521 310 9 0.61687 110 5 0.74151 323 8 0.82002 65 4 0.70518 150 4 0.75041 67 5 0.75054 197 9 0.79870 267 9 0.33333 32 4 0.66444 219 9 0.72817 99 4 0.94339 182 9 NA 0 0 NA 0 0 0.74484 609 9 0.72747 480 9 0.89661 447 9 0.59848 80 6 0.89583 28 4 0.86088 208 11 0.82597 49 6 0.76190 27 4 0.92908 302 9 0.64925 252 7 0.63636 32 3 0.68450 407 9 0.67462 145 4 0.92908 312 4 0.96753 314 9 0.54856 196 9 0.56286 444 9 0.71111 351 9 NA 0 0 0.65179 39 3 0.687322 480 9 0.69139 444 9 0.90893 452 9 0.70753 285 9 0.85981 961 9 0.74693 367 9 0.93558 0.77210 0.77253 0.90719 0.89771 0.89038 0.87099 0.93248 0.86167 0.92826 0.94067 0.59528 0.85057 0.94707 0.94491 NA NA 0.91033 0.95755 0.87614 0.83793 0.82239 0.89687 0.84994 0.85123 0.94262 0.76500 0.88970 0.91045 0.87101 0.91239 0.94213 0.87309 0.68037 0.91820 NA 0.74822 0.898549 0.92177 0.89409 0.83492 0.91156 0.91031 1 0.89238 0.88863 0.0062234 9 0.75646 0.71531 0.041148 0.91313 0.5969282 insignificant 1 1.00000 insignificant 0.99094 0.201696 insignificant 1 1 insignificant -0.063032 0.256950 insignificant 1 insignificant 0.89238 0.81378 0.078204 9 0.75646 0.58234 0.174115 4.4149e-03 0.99810 weaklyHypermeth 1.4242e-01 1 insignificant 5.4306e-01 0.83304 insignificant 1.0000e+00 1 insignificant 0.089098 9.8487e-02 insignificant 1.0000e+00 insignificant 0.89236 0.89358 0.0042446 9 0.73617 0.75105 -0.014886 4.6015e-01 0.321624 insignificant 1.0000e+00 1 insignificant 5.9705e-01 0.489815 insignificant 1.000000 1 insignificant -0.0614906 0.310789 insignificant 1 insignificant 0.88822 0.81325 0.068732 9 0.66422 0.54075 0.123469 1.1948e-02 0.99981 weaklyHypermeth 3.6207e-01 1 insignificant 3.6291e-01 0.99808 insignificant 1.0000e+00 1 insignificant 0.152130 9.5638e-03 weaklyHypermeth 6.8313e-01 insignificant 0.88904 0.89358 0.00078669 9 0.77492 0.75105 0.0238701 4.2008e-01 0.70193 insignificant 1.0000e+00 1 insignificant 3.1549e-01 0.96435 insignificant 1.0000000 1 insignificant 0.0015413 0.979155 insignificant 1 insignificant 0.81432 0.89358 -0.075465 9 0.63087 0.75105 -0.120177 0.99912 4.0744e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.97639 4.7881e-01 insignificant 1 1.0000e+00 insignificant -0.150588 0.02552434 weaklyHypometh 1.00000 insignificant chr18 17812782 17813782 145120 ENSG00000209125,ENSG00000222520 0.73488 141 7 0.72708 290 8 0.84954 247 8 0.87798 144 5 0.78358 208 8 0.74448 259 8 0.84884 230 8 0.71105 224 7 0.72673 209 8 0.83349 179 7 0.78372 303 8 0.74661 148 8 0.39729 207 8 0.76898 81 7 0.80708 215 8 0.76066 96 6 0.65239 137 5 0.75271 161 7 0.55838 146 8 0.83064 192 8 0.80200 82 5 0.50864 140 7 0.79082 150 8 0.82719 149 7 0.78428 74 4 0.82037 384 8 0.56882 135 7 0.72629 95 8 0.70589 154 6 0.72869 305 7 0.45736 363 8 0.82766 232 7 0.11470 311 8 0.15424 143 8 0.13569 527 7 0.066831 56 3 0.24583 207 7 0.024554 295 8 0.83653 190 7 0.65661 172 7 0.49403 157 4 0.29406 107 4 0.59168 183 7 0.79077 0.72604 0.81567 0.81666 0.81198 0.72130 0.81616 0.71484 0.67948 0.81645 0.75500 0.71004 0.34067 0.71730 0.74559 0.63519 0.50767 0.64929 0.56424 0.77905 0.73589 0.49936 0.75396 0.78540 0.83239 0.76582 0.57103 0.64874 0.66534 0.69790 0.47666 0.83028 0.12789 0.11052 0.10502 0.063563 0.20332 0.013875 0.78631 0.63883 0.56212 0.24340 0.57996 5 0.74011 0.71807 0.0165731 8 0.74306 0.70321 0.039854 0.11827 0.9351394 insignificant 1 1.00000 insignificant 0.25637 0.913106 insignificant 1 1 insignificant 0.032472 0.476502 insignificant 1 insignificant 0.74011 0.13840 0.594410 8 0.74306 0.12445 0.618608 3.5728e-59 1.00000 hypermethylated 3.5728e-56 1 hypermethylated 1.2421e-20 1.00000 hypermethylated 1.2421e-17 1 hypermethylated 0.621164 2.6217e-09 hypermethylated 8.7391e-07 hypermethylated 0.74011 0.59209 0.1071955 7 0.74306 0.64735 0.095711 2.1811e-04 0.923935 weaklyHypermeth 1.9828e-02 1 weaklyHypermeth 3.2624e-04 0.695622 weaklyHypermeth 0.081561 1 weaklyHypermeth 0.1702243 0.131442 insignificant 1 insignificant 0.71807 0.13840 0.577130 8 0.70321 0.12445 0.578754 1.6609e-38 1.00000 hypermethylated 1.6609e-35 1 hypermethylated 3.3651e-18 1.00000 hypermethylated 3.3651e-15 1 hypermethylated 0.588692 3.0576e-09 hypermethylated 3.0576e-06 hypermethylated 0.71807 0.59209 0.08869578 7 0.70321 0.64735 0.0558576 1.7019e-02 0.69450 weaklyHypermeth 1.0000e+00 1 insignificant 1.9131e-02 0.76335 weaklyHypermeth 1.0000000 1 insignificant 0.1377527 0.210814 insignificant 1 insignificant 0.13840 0.59209 -0.497742 7 0.12445 0.64735 -0.522897 1.00000 2.5388e-20 hypomethylated 1 2.5388e-17 hypomethylated 1.00000 1.6528e-08 hypomethylated 1 1.6528e-05 hypomethylated -0.450939 0.00519295 weaklyHypometh 0.55874 insignificant chr18 18024257 18025257 145140 ENSG00000201852 0.73568 86 4 0.63201 213 5 0.69562 127 5 0.95604 138 3 0.93658 70 5 0.89869 128 4 0.83568 110 5 0.86667 76 4 0.87451 61 2 0.87895 54 2 0.81831 150 5 0.78602 46 2 0.89500 57 2 NA 0 0 0.85417 48 5 0.43129 30 2 0.76364 42 2 0.62279 67 3 0.85457 102 5 0.94091 79 4 0.87143 30 3 0.88889 9 0 0.82262 66 5 0.88889 17 1 0.87806 146 3 0.84168 128 4 0.96000 31 5 1.00000 23 2 0.84255 117 5 0.69117 170 5 0.91343 162 4 0.93313 145 4 0.28246 218 5 0.47761 164 5 0.26786 189 5 0.150309 200 3 0.20738 147 5 0.312857 188 5 0.62601 158 4 0.46620 155 3 0.79162 123 3 0.65000 31 3 0.76067 127 3 0.93528 0.85092 0.72381 0.94744 0.93030 0.90763 0.84255 0.90000 0.86667 0.80000 0.79398 NA 1.00000 NA 0.73333 NA NA 0.59920 0.85933 0.91515 0.84000 0.86667 0.85238 0.86667 0.87033 0.92774 0.92000 NA 0.86327 0.86659 0.91130 0.95959 0.30354 0.50698 0.00000 0.132610 0.18050 0.013439 0.73830 0.43641 0.73000 0.54000 0.75122 0 0.83076 0.88782 -0.0527267 5 0.67098 0.72230 -0.051322 0.99358 0.0101337 weaklyHypometh 1 1.00000 insignificant 0.96791 0.055287 insignificant 1 1 insignificant -0.073595 0.061666 lowCoverage 1 lowCoverage 0.83076 0.23056 0.543264 5 0.67098 0.31386 0.357125 2.5421e-27 0.99832 hypermethylated 6.3553e-25 1 hypermethylated 5.8375e-10 0.99965 hypermethylated 2.9187e-07 1 hypermethylated 0.520979 2.6988e-06 lowCoverage 6.7470e-04 lowCoverage 0.83353 0.64815 0.2014010 3 0.83937 0.67866 0.160715 2.0726e-07 0.770433 lowCoverage 3.4543e-05 1 lowCoverage 4.9705e-05 0.912679 lowCoverage 0.024852 1 lowCoverage 0.1451582 0.064326 lowCoverage 1 lowCoverage 0.88782 0.23056 0.638397 5 0.72230 0.31386 0.408447 1.6662e-25 0.99883 hypermethylated 4.1656e-23 1 hypermethylated 8.1162e-10 0.99975 hypermethylated 4.0581e-07 1 hypermethylated 0.594574 4.2653e-06 lowCoverage 1.0663e-03 lowCoverage 0.89179 0.64815 0.24872525 3 0.89123 0.67866 0.2125656 4.5871e-10 0.99371 lowCoverage 3.3412e-07 1 lowCoverage 4.0205e-06 0.96575 lowCoverage 0.0040205 1 lowCoverage 0.2187529 0.015175 lowCoverage 1 lowCoverage 0.23021 0.64815 -0.454121 3 0.30607 0.67866 -0.372593 0.99904 2.5649e-07 lowCoverage 1 5.1298e-05 lowCoverage 0.99010 2.6763e-05 lowCoverage 1 1.3382e-02 lowCoverage -0.375821 0.00088938 lowCoverage 0.29646 lowCoverage chr18 21824408 21825408 145649 ENSG00000209859,ENSG00000222577 0.92020 184 5 0.86006 221 6 0.80890 182 6 0.95600 262 4 0.90316 140 6 0.90692 327 6 0.89933 183 6 0.91525 149 6 0.82455 136 6 0.95454 174 6 0.86919 207 6 0.81235 104 6 0.95318 186 6 0.91043 73 4 0.91511 243 6 0.80653 110 6 0.93440 97 6 0.92342 272 5 0.94666 151 6 0.90392 207 6 0.90440 77 6 0.93447 84 4 0.90515 188 6 0.92063 72 6 0.82386 41 4 0.95473 184 6 0.91097 89 6 0.94136 85 6 0.89195 175 6 0.89804 189 6 0.92392 192 6 0.92926 201 6 0.78306 223 6 0.84685 124 6 0.80356 171 5 0.871429 21 3 0.93392 154 6 0.881072 187 6 0.88452 316 5 0.95122 186 4 0.92147 225 4 0.86783 99 4 0.95607 247 4 0.93574 0.85225 0.79493 0.94353 0.89163 0.91740 0.91904 0.89446 0.77462 0.95513 0.88373 0.78328 0.95462 0.89083 0.92769 0.81834 0.89626 0.90338 0.95138 0.89180 0.89955 0.91128 0.92739 0.92893 0.82857 0.95003 0.86227 0.92205 0.87350 0.89530 0.95524 0.91236 0.75474 0.78328 0.78218 0.876228 0.93250 0.911892 0.90334 0.92507 0.87618 0.85529 0.93668 4 0.89634 0.91313 -0.0153629 6 0.89842 0.91580 -0.017376 0.94922 0.0687758 insignificant 1 1.00000 insignificant 0.97245 0.086056 insignificant 1 1 insignificant -0.015357 0.303217 insignificant 1 insignificant 0.89634 0.84432 0.050878 6 0.89842 0.84890 0.049521 1.5998e-02 0.79547 weaklyHypermeth 4.5709e-01 1 insignificant 6.2153e-01 0.72290 insignificant 1.0000e+00 1 insignificant 0.042891 1.2621e-01 insignificant 1.0000e+00 insignificant 0.89634 0.90960 -0.0058253 4 0.89842 0.91955 -0.021133 8.0245e-01 0.012149 lowCoverage 1.0000e+00 1 lowCoverage 9.2211e-01 0.047794 lowCoverage 1.000000 1 lowCoverage -0.0200163 0.365298 lowCoverage 1 lowCoverage 0.91313 0.84432 0.071028 6 0.91580 0.84890 0.066897 1.9388e-02 0.98933 weaklyHypermeth 5.7025e-01 1 insignificant 2.3493e-01 0.98503 insignificant 1.0000e+00 1 insignificant 0.058248 4.8644e-02 weaklyHypermeth 1.0000e+00 insignificant 0.91313 0.90960 0.01023277 4 0.91580 0.91955 -0.0037568 1.9513e-01 0.36474 lowCoverage 1.0000e+00 1 lowCoverage 6.4052e-01 0.21439 lowCoverage 1.0000000 1 lowCoverage -0.0046595 0.823252 lowCoverage 1 lowCoverage 0.84432 0.90960 -0.073404 4 0.84890 0.91955 -0.070654 0.76037 1.1221e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.94122 8.6570e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.062908 0.05499275 lowCoverage 1.00000 lowCoverage chr18 22529829 22530829 145699 ENSG00000212367 0.90838 345 6 0.80643 221 6 0.65388 121 6 0.90988 279 5 0.95261 46 2 0.86907 341 6 0.85938 89 5 0.92977 176 6 0.87468 146 5 0.92332 102 5 0.92175 179 6 0.93889 32 2 0.92825 193 6 0.83144 31 2 0.90891 104 5 1.00000 7 0 0.98333 39 5 0.80517 307 5 0.90600 100 6 0.90852 331 6 0.89722 44 3 0.92367 75 5 0.91655 131 6 0.96131 107 6 0.94444 59 5 0.93223 221 6 0.86409 133 6 0.93148 86 4 0.90764 150 5 0.93382 282 6 0.90396 262 6 0.91401 368 6 0.14362 250 6 0.19487 83 5 0.50000 128 5 0.666667 15 0 0.15378 99 5 0.524477 257 6 0.94711 300 5 0.91784 260 6 0.76606 287 5 0.88097 234 6 0.90367 335 5 0.88995 0.80108 0.69578 0.88384 0.93659 0.88556 0.90309 0.93951 0.85292 0.89687 0.91900 0.92331 0.95847 0.87878 0.91451 0.95182 0.96994 0.82775 0.93245 0.90216 0.89788 0.88756 0.91488 0.94877 0.92534 0.92956 0.87377 0.95165 0.91625 0.95760 0.90863 0.91526 0.16453 0.16451 0.52023 0.705787 0.19136 0.528459 0.93840 0.88864 0.87390 0.86990 0.91232 3 0.87865 0.91919 -0.0410909 6 0.87856 0.91587 -0.037316 0.99985 0.0016356 weaklyHypometh 1 0.81778 insignificant 0.99191 0.127837 insignificant 1 1 insignificant -0.028219 0.137761 lowCoverage 1 lowCoverage 0.87865 0.29327 0.586439 6 0.87856 0.31748 0.561079 2.8541e-39 1.00000 hypermethylated 9.5138e-37 1 hypermethylated 6.7294e-08 1.00000 hypermethylated 1.6824e-05 1 hypermethylated 0.527082 2.0321e-03 lowCoverage 2.2579e-01 lowCoverage 0.87865 0.89619 -0.0190186 5 0.87856 0.90057 -0.022017 8.5889e-01 0.086233 insignificant 1.0000e+00 1 insignificant 5.8453e-01 0.439718 insignificant 1.000000 1 insignificant 0.0078536 0.831481 lowCoverage 1 lowCoverage 0.91919 0.29327 0.628556 6 0.91587 0.31748 0.598395 1.5030e-30 1.00000 hypermethylated 5.0101e-28 1 hypermethylated 2.7568e-07 1.00000 hypermethylated 6.8920e-05 1 hypermethylated 0.555301 1.7987e-03 lowCoverage 2.9978e-01 lowCoverage 0.91919 0.89619 0.02293917 5 0.91587 0.90057 0.0152990 4.2079e-02 0.77554 weaklyHypermeth 1.0000e+00 1 insignificant 1.5000e-01 0.89627 insignificant 1.0000000 1 insignificant 0.0360728 0.316820 insignificant 1 insignificant 0.29327 0.89619 -0.601875 5 0.31748 0.90057 -0.583096 1.00000 3.0761e-13 hypomethylated 1 1.0254e-10 hypomethylated 1.00000 4.5153e-04 hypomethylated 1 1.1288e-01 insignificant -0.519228 0.00171416 lowCoverage 0.34283 lowCoverage chr18 22530044 22531044 145700 ENSG00000212367 0.90838 345 6 0.80643 221 6 0.65388 121 6 0.90988 279 5 0.95261 46 2 0.86907 341 6 0.85938 89 5 0.92977 176 6 0.87468 146 5 0.92332 102 5 0.92175 179 6 0.93889 32 2 0.92825 193 6 0.83144 31 2 0.90891 104 5 1.00000 7 0 0.98333 39 5 0.80517 307 5 0.90600 100 6 0.90852 331 6 0.89722 44 3 0.92367 75 5 0.91655 131 6 0.96131 107 6 0.94444 59 5 0.93223 221 6 0.86409 133 6 0.93148 86 4 0.90764 150 5 0.93382 282 6 0.90396 262 6 0.91401 368 6 0.14362 250 6 0.19487 83 5 0.50000 128 5 0.666667 15 0 0.15378 99 5 0.524477 257 6 0.94711 300 5 0.91784 260 6 0.76606 287 5 0.88097 234 6 0.90367 335 5 0.88995 0.80108 0.69578 0.88384 0.93659 0.88556 0.90309 0.93951 0.85292 0.89687 0.91900 0.92331 0.95847 0.87878 0.91451 0.95182 0.96994 0.82775 0.93245 0.90216 0.89788 0.88756 0.91488 0.94877 0.92534 0.92956 0.87377 0.95165 0.91625 0.95760 0.90863 0.91526 0.16453 0.16451 0.52023 0.705787 0.19136 0.528459 0.93840 0.88864 0.87390 0.86990 0.91232 3 0.87865 0.91919 -0.0410909 6 0.87856 0.91587 -0.037316 0.99985 0.0016356 weaklyHypometh 1 0.81778 insignificant 0.99191 0.127837 insignificant 1 1 insignificant -0.028219 0.137761 lowCoverage 1 lowCoverage 0.87865 0.29327 0.586439 6 0.87856 0.31748 0.561079 2.8541e-39 1.00000 hypermethylated 9.5138e-37 1 hypermethylated 6.7294e-08 1.00000 hypermethylated 1.6824e-05 1 hypermethylated 0.527082 2.0321e-03 lowCoverage 2.2579e-01 lowCoverage 0.87865 0.89619 -0.0190186 5 0.87856 0.90057 -0.022017 8.5889e-01 0.086233 insignificant 1.0000e+00 1 insignificant 5.8453e-01 0.439718 insignificant 1.000000 1 insignificant 0.0078536 0.831481 lowCoverage 1 lowCoverage 0.91919 0.29327 0.628556 6 0.91587 0.31748 0.598395 1.5030e-30 1.00000 hypermethylated 5.0101e-28 1 hypermethylated 2.7568e-07 1.00000 hypermethylated 6.8920e-05 1 hypermethylated 0.555301 1.7987e-03 lowCoverage 2.9978e-01 lowCoverage 0.91919 0.89619 0.02293917 5 0.91587 0.90057 0.0152990 4.2079e-02 0.77554 weaklyHypermeth 1.0000e+00 1 insignificant 1.5000e-01 0.89627 insignificant 1.0000000 1 insignificant 0.0360728 0.316820 insignificant 1 insignificant 0.29327 0.89619 -0.601875 5 0.31748 0.90057 -0.583096 1.00000 3.0761e-13 hypomethylated 1 1.0254e-10 hypomethylated 1.00000 4.5153e-04 hypomethylated 1 1.1288e-01 insignificant -0.519228 0.00171416 lowCoverage 0.34283 lowCoverage chr18 30234674 30235674 146264 NOL4 ENSG00000101746 0.88140 140 6 0.83452 33 3 0.90476 12 0 0.87981 193 6 0.94444 11 0 0.80048 100 6 0.59864 24 2 0.90909 25 2 0.50000 12 0 0.92857 14 2 0.90952 62 6 0.00000 2 0 0.98039 38 2 NA 0 0 0.61905 21 0 1.00000 4 0 0.86111 10 0 0.87717 179 6 0.78480 59 6 0.80244 92 6 0.86111 15 2 0.83333 35 2 0.82418 67 6 1.00000 10 2 0.79167 24 2 0.78498 127 6 0.91429 24 2 1.00000 6 0 0.47059 39 2 0.75206 109 6 0.75350 121 6 0.87701 169 6 0.75946 49 6 0.90007 53 2 0.66667 60 6 0.66667 14 0 0.61111 20 2 0.70317 88 6 0.85481 91 6 0.86708 164 6 0.80696 225 6 0.72052 80 6 0.81701 147 6 0.90474 0.81250 0.66667 0.88889 0.83333 0.78333 0.92857 0.77273 0.50000 0.92857 0.92857 0.00000 0.94118 NA 1.00000 1.00000 0.75000 0.93019 0.85440 0.95000 0.86111 0.91667 0.88462 1.00000 0.87500 0.95652 0.91429 1.00000 0.91176 0.88141 0.86111 0.90972 0.76250 0.70022 0.75000 1.00000 0.58333 0.82619 0.96154 0.87248 0.83468 0.93833 0.92602 0 0.84951 0.80965 0.0360062 6 0.81566 0.81904 -0.0033857 0.055596 0.768658 insignificant 1 1 insignificant 0.11084 0.763626 insignificant 1 1 insignificant -0.0315659 0.63937 lowCoverage 1 lowCoverage 0.85005 0.71127 0.138303 6 0.84049 0.70236 0.138130 5.3423e-08 0.99993 weaklyHypermeth 3.1425e-06 1 weaklyHypermeth 6.7418e-03 0.99924 weaklyHypermeth 2.8091e-01 1 insignificant 0.072468 0.29618718 lowCoverage 1.000000 lowCoverage 0.84966 0.83027 0.0215448 6 0.83870 0.85801 -0.019305 1.8062e-01 0.84003 insignificant 1.00000000 1 insignificant 1.5349e-01 0.91767 insignificant 1.000000 1 insignificant -0.02294881 0.7018732 lowCoverage 1 lowCoverage 0.80888 0.71127 0.100106 6 0.78888 0.70236 0.086524 2.5021e-05 0.98174 weaklyHypermeth 1.1915e-03 1 weaklyHypermeth 3.5294e-02 0.95011 weaklyHypermeth 1.00000000 1 insignificant 0.10403 0.09406886 lowCoverage 1.000000 lowCoverage 0.80965 0.83003 -0.0156429 6 0.81904 0.83772 -0.0186776 6.2308e-01 0.56845 insignificant 1.0000e+00 1 insignificant 4.7890e-01 0.56135 insignificant 1.000000 1 insignificant 0.0086170 0.8588902 lowCoverage 1 lowCoverage 0.71127 0.82930 -0.114647 6 0.70236 0.81068 -0.108315 9.9936e-01 1.4994e-03 weaklyHypometh 1.000000 8.8203e-02 weaklyHypometh 0.997871 0.04069858 weaklyHypometh 1 1.000000 insignificant -0.095417 0.08635514 lowCoverage 1.000000 lowCoverage chr18 31738780 31739780 146314 MIR187 ENSG00000207797 0.94059 283 9 0.82856 336 9 0.79467 338 7 0.92446 251 9 0.89955 260 9 0.93880 332 8 0.89386 240 9 0.99103 272 9 0.92342 167 7 0.96185 362 7 0.93812 379 9 0.92382 127 7 0.98438 227 7 0.92121 112 5 0.93298 494 7 0.94046 131 7 0.95139 75 4 0.83110 398 7 0.92896 347 9 0.95285 286 9 0.90751 92 6 0.90958 98 5 0.91653 180 7 0.93927 114 7 0.92995 275 7 0.96212 315 9 0.87524 278 7 0.94444 126 6 0.91375 217 8 0.99044 367 9 0.95625 372 9 0.97463 254 9 0.65050 234 9 0.49891 251 7 0.67911 117 5 0.76593 132 8 0.71455 166 9 0.85882 317 9 0.94314 300 9 0.96840 249 7 0.91250 279 7 0.96885 223 5 0.91397 226 7 0.96153 0.93164 0.92019 0.94503 0.93566 0.93768 0.86035 0.98278 0.94445 0.95107 0.91086 0.87683 0.96762 0.91136 0.91563 0.93570 0.94211 0.87623 0.94153 0.93518 0.83264 0.90214 0.92521 0.93404 0.91662 0.96024 0.86895 0.94708 0.89505 0.98144 0.95182 0.95853 0.76623 0.58980 0.70223 0.89731 0.82038 0.88170 0.93733 0.95469 0.94957 0.96917 0.92464 4 0.93170 0.93785 -0.0067291 9 0.88456 0.95155 -0.0669931 0.939666 0.223675 insignificant 1 1 insignificant 0.94305 0.177232 insignificant 1 1 insignificant -0.0148739 0.31849 insignificant 1 insignificant 0.93200 0.72122 0.203718 9 0.93298 0.69088 0.242099 3.6054e-27 1.00000 hypermethylated 1.8027e-24 1 hypermethylated 2.2072e-09 1.00000 hypermethylated 1.1036e-06 1 hypermethylated 0.225467 0.00522989 weaklyHypermeth 0.417262 insignificant 0.93170 0.94753 -0.0177844 7 0.88456 0.95019 -0.065630 9.8463e-01 0.30120 insignificant 1.00000000 1 insignificant 9.9180e-01 0.45925 insignificant 1.000000 1 insignificant -0.02127109 0.2283248 insignificant 1 insignificant 0.93783 0.72062 0.195492 9 0.94671 0.62179 0.324914 3.0261e-18 1.00000 weaklyHypermeth 1.5130e-15 1 weaklyHypermeth 4.9420e-08 1.00000 weaklyHypermeth 0.00002471 1 weaklyHypermeth 0.24034 0.00409237 weaklyHypermeth 0.341031 insignificant 0.93785 0.94753 -0.0109917 7 0.95155 0.95019 0.0013635 8.7088e-01 0.81813 insignificant 1.0000e+00 1 insignificant 7.8088e-01 0.78586 insignificant 1.000000 1 insignificant -0.0063972 0.6909678 insignificant 1 insignificant 0.72122 0.94737 -0.200363 7 0.69088 0.93912 -0.248238 1.0000e+00 2.4906e-08 hypomethylated 1.000000 1.2453e-05 hypomethylated 1.000000 0.00014959 hypomethylated 1 0.049863 hypomethylated -0.246738 0.00339448 weaklyHypometh 0.498187 insignificant chr18 32923414 32924414 146338 C18orf10 ENSG00000134779 0.57247 175 5 0.49984 152 5 0.57243 133 5 0.63611 97 5 0.51846 85 5 0.53160 250 5 0.65674 137 5 0.49873 101 5 0.58623 133 5 0.57868 84 5 0.51451 145 5 0.48614 67 5 0.52696 118 5 NA 0 0 0.63855 82 5 0.54481 99 5 0.47993 86 5 0.58034 89 5 0.54959 138 5 0.49003 189 5 0.65111 62 5 0.57778 42 5 0.52403 117 5 0.66429 37 4 0.64500 34 5 0.56497 233 5 0.57667 49 5 0.60889 45 5 0.48803 97 5 0.56614 221 5 0.55134 205 5 0.49116 285 5 0.53717 119 5 0.43625 91 5 0.41315 146 5 0.45084 52 5 0.48606 53 5 0.52579 171 5 0.59344 147 5 0.56429 117 5 0.55812 120 5 0.53609 132 5 0.64701 120 5 0.61545 0.54489 0.63019 0.68537 0.56718 0.59110 0.70665 0.55654 0.62778 0.64361 0.56803 0.54759 0.58712 NA 0.68470 0.59833 0.54072 0.62405 0.60556 0.54371 0.69105 0.64103 0.57001 0.71833 0.69740 0.62372 0.60671 0.66063 0.53869 0.62261 0.60586 0.54881 0.58523 0.50071 0.47731 0.48416 0.54380 0.58177 0.64467 0.61436 0.62239 0.59103 0.67974 5 0.62966 0.62439 -0.0038313 5 0.55042 0.54939 0.0010241 0.597143 0.401372 insignificant 1 1 insignificant 0.87604 0.079129 insignificant 1 1 insignificant -0.0251442 0.24176 lowCoverage 1 lowCoverage 0.62966 0.59177 0.057031 5 0.55042 0.47568 0.074744 2.3889e-04 0.98997 weaklyHypermeth 8.8477e-03 1 weaklyHypermeth 1.6237e-03 0.98668 weaklyHypermeth 1.0825e-01 1 insignificant 0.075762 0.01120898 lowCoverage 0.700561 lowCoverage 0.62966 0.60692 -0.0264403 5 0.55042 0.57800 -0.027580 9.8504e-01 0.13002 insignificant 1.00000000 1 insignificant 9.8767e-01 0.11950 insignificant 1.000000 1 insignificant -0.02914935 0.2371929 lowCoverage 1 lowCoverage 0.62439 0.59177 0.064419 5 0.54939 0.47568 0.073720 2.7520e-04 0.99806 weaklyHypermeth 9.8287e-03 1 weaklyHypermeth 1.4987e-04 0.99894 weaklyHypermeth 0.01665170 1 weaklyHypermeth 0.10091 0.00259353 lowCoverage 0.235776 lowCoverage 0.62439 0.60692 -0.0247132 5 0.54939 0.57800 -0.0286036 9.3025e-01 0.07938 insignificant 1.0000e+00 1 insignificant 5.5867e-01 0.37783 insignificant 1.000000 1 insignificant -0.0040051 0.8783848 lowCoverage 1 lowCoverage 0.59177 0.60692 -0.089099 5 0.47568 0.57800 -0.102323 9.9959e-01 3.8390e-04 weaklyHypometh 1.000000 2.9531e-02 weaklyHypometh 0.999769 0.00080641 weaklyHypometh 1 0.131158 insignificant -0.104911 0.00456407 weaklyHypometh 0.507118 insignificant chr18 33144543 33145543 146364 C18orf10 ENSG00000134779 0.87577 234 6 0.86935 164 8 0.87511 58 5 0.89583 228 6 0.89444 41 5 0.79012 286 6 0.71389 41 3 0.95468 59 5 0.92698 39 5 1.00000 23 2 0.95302 222 6 1.00000 11 0 0.98438 35 5 0.96875 37 3 0.96667 35 2 1.00000 8 0 NA 0 0 0.69335 274 6 0.91353 222 6 0.90953 239 6 0.81569 50 3 0.83333 6 0 0.79565 110 6 0.82894 37 2 0.88426 28 2 0.91957 189 8 0.85865 45 4 1.00000 12 2 0.91842 145 6 0.93496 207 6 0.83848 251 8 0.82979 219 6 0.63706 110 6 0.72573 138 6 0.85173 391 6 1.00000 1 0 0.50595 87 6 0.68039 283 6 0.86453 164 6 0.96827 206 8 0.93839 184 6 0.87508 219 6 0.88114 249 8 0.92628 0.83698 0.85001 0.91643 0.78503 0.96381 0.78827 0.95363 0.88095 0.98760 0.93494 0.91749 0.94643 0.99490 0.92939 0.98672 NA 0.72871 0.93069 0.92175 0.93397 0.86562 0.92950 0.85311 0.78401 0.86367 0.86028 0.97448 0.88648 0.88654 0.92028 0.97887 0.63285 0.66541 0.84322 NA 0.61769 0.87422 0.88517 0.94953 0.89248 0.87055 0.89749 0 0.90027 0.91301 -0.0148919 6 0.72827 0.77802 -0.0497474 0.846009 0.588510 insignificant 1 1 insignificant 0.63417 0.896604 insignificant 1 1 insignificant 0.0330169 0.23087 lowCoverage 1 lowCoverage 0.90027 0.74827 0.158159 6 0.72827 0.55946 0.168816 2.8242e-07 0.94658 weaklyHypermeth 1.4864e-05 1 weaklyHypermeth 3.1693e-03 0.99875 weaklyHypermeth 1.8113e-01 1 insignificant 0.171019 0.05955214 lowCoverage 1.000000 lowCoverage 0.90067 0.90705 -0.0065449 6 0.80919 0.91386 -0.104667 8.7164e-01 0.71763 insignificant 1.00000000 1 insignificant 5.7775e-01 0.98107 insignificant 1.000000 1 insignificant -0.00098568 0.9732617 lowCoverage 1 lowCoverage 0.91301 0.74827 0.174805 6 0.77802 0.55946 0.218563 5.4571e-08 0.89283 weaklyHypermeth 3.6381e-06 1 weaklyHypermeth 1.9002e-03 0.91472 weaklyHypermeth 0.10556620 1 insignificant 0.13800 0.10929221 lowCoverage 1.000000 lowCoverage 0.91365 0.90705 0.0088603 6 0.80891 0.91386 -0.1049481 6.7140e-01 0.70036 insignificant 1.0000e+00 1 insignificant 6.4152e-01 0.75854 insignificant 1.000000 1 insignificant -0.0340026 0.2324212 lowCoverage 1 lowCoverage 0.74901 0.90705 -0.152556 6 0.62162 0.91386 -0.292240 9.7625e-01 6.6704e-04 weaklyHypometh 1.000000 4.6532e-02 weaklyHypometh 0.988773 0.01697533 weaklyHypometh 1 1.000000 insignificant -0.172004 0.05875118 insignificant 1.000000 insignificant chr18 33144689 33145689 146365 C18orf10 ENSG00000134779 0.77986 309 7 0.77547 264 9 0.83465 116 6 0.81955 314 7 0.81111 72 6 0.72292 397 7 0.66576 103 5 0.84101 124 6 0.86585 104 6 0.91212 83 4 0.89556 345 7 0.89000 48 2 0.91562 74 6 0.88072 67 5 0.87963 104 4 0.86111 44 2 0.77692 136 2 0.69162 336 7 0.83933 262 7 0.85578 346 7 0.74735 79 5 0.89976 36 2 0.75573 156 7 0.73598 71 4 0.80106 107 4 0.88637 292 9 0.80012 82 5 0.87802 39 4 0.84460 182 7 0.88008 278 7 0.80198 353 9 0.76823 358 7 0.58123 210 7 0.58424 153 7 0.67652 416 7 0.50000 22 2 0.44009 148 7 0.61412 369 7 0.77647 225 7 0.87718 280 9 0.87283 264 7 0.79732 251 7 0.81036 346 9 0.66817 0.55552 0.68895 0.66780 0.53705 0.65644 0.64762 0.65631 0.70000 0.75538 0.72209 0.76352 0.73678 0.67326 0.76375 0.77863 0.80334 0.74944 0.74450 0.74147 0.64138 0.71495 0.68789 0.60420 0.58079 0.72708 0.55368 0.75766 0.69067 0.74146 0.72888 0.69375 0.54277 0.42142 0.41856 0.54202 0.45543 0.60824 0.58821 0.61509 0.66776 0.66835 0.64603 2 0.79084 0.79784 -0.0044854 7 0.69542 0.74132 -0.0459033 0.890500 0.631124 insignificant 1 1 insignificant 0.76930 0.922077 insignificant 1 1 insignificant 0.0091228 0.69885 insignificant 1 insignificant 0.79084 0.63402 0.185125 7 0.69542 0.50246 0.192961 5.0140e-13 0.99987 weaklyHypermeth 1.0028e-10 1 weaklyHypermeth 1.8917e-06 1.00000 weaklyHypermeth 4.7293e-04 1 weaklyHypermeth 0.259694 0.00019773 hypermethylated 0.049433 hypermethylated 0.79106 0.79575 0.0315897 7 0.76496 0.84267 -0.077709 2.7243e-01 0.88439 insignificant 1.00000000 1 insignificant 1.5716e-01 0.99562 insignificant 1.000000 1 insignificant -0.00110139 0.9669200 insignificant 1 insignificant 0.79784 0.63402 0.193624 7 0.74132 0.50246 0.238865 4.3089e-12 0.99948 weaklyHypermeth 1.0772e-09 1 weaklyHypermeth 3.2516e-06 0.99999 weaklyHypermeth 0.00065032 1 weaklyHypermeth 0.25057 0.00022989 hypermethylated 0.038315 hypermethylated 0.79813 0.79575 0.0359329 7 0.76545 0.84267 -0.0772152 2.1171e-01 0.92499 insignificant 1.0000e+00 1 insignificant 2.4088e-01 0.95813 insignificant 1.000000 1 insignificant -0.0102242 0.7089247 insignificant 1 insignificant 0.63450 0.79575 -0.157901 7 0.55270 0.84267 -0.289966 9.9999e-01 2.2846e-05 weaklyHypometh 1.000000 2.5623e-03 weaklyHypometh 1.000000 0.00044012 weaklyHypometh 1 0.088023 weaklyHypometh -0.260795 0.00018935 hypomethylated 0.047337 hypomethylated chr18 33224395 33225395 146382 C18orf10 ENSG00000134779 0.88198 169 6 0.78725 119 7 0.40556 116 7 0.72357 89 5 0.59153 48 3 0.83938 130 6 0.49097 46 3 0.74650 87 6 0.82500 47 5 0.61571 52 4 0.68021 296 7 0.63240 40 3 0.91831 65 6 0.80000 11 0 0.82652 46 6 0.45833 11 0 0.84038 26 3 0.69085 155 5 0.89610 226 6 0.82505 138 6 0.82902 94 7 0.63889 9 0 0.75196 77 6 0.77143 54 4 0.75492 124 4 0.80435 224 7 0.60061 85 7 0.90833 18 3 0.68879 174 6 0.79740 182 7 0.80555 253 8 0.65860 163 6 0.64876 140 7 0.36536 259 7 0.41055 198 5 0.46825 60 3 0.55037 134 9 0.60655 277 7 0.56508 97 7 0.79789 146 7 0.60250 74 5 0.49472 117 6 0.73434 72 5 0.85753 0.72846 0.49240 0.90277 0.91810 0.89361 0.64833 0.95296 0.88643 0.81607 0.90780 0.78722 0.92796 0.88112 0.91013 0.70608 0.84078 0.88019 0.86662 0.87791 0.91659 0.57678 0.92566 0.89857 0.63235 0.91448 0.85924 0.87431 0.90472 0.93219 0.90653 0.86172 0.86692 0.49944 0.53013 0.66613 0.84664 0.68016 0.82529 0.88098 0.77060 0.77135 0.93604 0 0.81837 0.87852 -0.0621557 6 0.60778 0.63783 -0.0300533 0.849854 0.012205 weaklyHypometh 1 1 insignificant 0.82088 0.181905 insignificant 1 1 insignificant -0.0270410 0.52672 lowCoverage 1 lowCoverage 0.81794 0.56554 0.215164 6 0.55713 0.41453 0.142608 2.5608e-07 1.00000 hypermethylated 1.4227e-05 1 hypermethylated 3.7502e-03 1.00000 weaklyHypermeth 1.9738e-01 1 insignificant 0.215472 0.00295152 lowCoverage 0.368940 lowCoverage 0.81880 0.79249 0.0587400 6 0.66856 0.63952 0.029035 1.3530e-01 0.65083 insignificant 1.00000000 1 insignificant 4.5603e-01 0.84508 insignificant 1.000000 1 insignificant 0.08487295 0.2314985 lowCoverage 1 lowCoverage 0.87852 0.56607 0.292405 7 0.63783 0.45221 0.185625 9.1258e-10 1.00000 hypermethylated 9.1258e-08 1 hypermethylated 2.8924e-05 0.99997 hypermethylated 0.00482063 1 hypermethylated 0.24251 0.00155716 weaklyHypermeth 0.155716 insignificant 0.88025 0.79249 0.1068367 6 0.67662 0.63952 0.0370936 1.4445e-03 0.47921 weaklyHypermeth 2.0635e-01 1 insignificant 1.3532e-01 0.52684 insignificant 1.000000 1 insignificant 0.1119140 0.1194249 insignificant 1 insignificant 0.56620 0.79249 -0.170002 6 0.44743 0.63952 -0.192094 9.9986e-01 4.5074e-03 weaklyHypometh 1.000000 2.1464e-01 insignificant 0.999874 0.01805317 weaklyHypometh 1 1.000000 insignificant -0.130600 0.10636658 insignificant 1.000000 insignificant chr18 33409179 33410179 146428 BRUNOL4 ENSG00000101489 0.83206 154 5 0.78848 155 6 0.71541 108 6 0.81755 191 5 0.79487 36 2 0.78589 152 6 0.75420 92 6 0.85073 152 6 0.77879 79 6 0.88968 88 6 0.83414 177 6 0.86199 42 2 0.84456 181 6 NA 0 0 0.72955 79 6 0.84722 23 1 0.74352 57 2 0.61914 222 5 0.67594 98 5 0.81911 186 6 0.93720 51 5 0.56000 42 5 0.77520 103 5 0.87897 50 5 0.76324 91 5 0.80465 227 6 0.88267 53 6 0.62500 20 1 0.94396 116 5 0.92958 214 6 0.84179 222 6 0.84254 202 6 0.64919 145 6 0.78793 103 5 0.50000 14 1 0.66667 10 0 0.74588 57 5 0.83520 276 6 0.53175 201 5 0.63701 228 5 0.62762 184 5 0.63729 182 5 0.73891 173 5 0.86463 0.78790 0.61947 0.78897 0.88128 0.79505 0.80150 0.84016 0.79422 0.93738 0.89816 0.82750 0.83026 NA 0.69768 0.80479 0.70076 0.55199 0.79185 0.81252 0.93905 0.65479 0.71710 0.91879 0.81414 0.78388 0.89063 0.82961 0.92859 0.89421 0.86628 0.84277 0.51853 0.76291 NA 0.30137 0.77195 0.80995 0.48952 0.53106 0.51374 0.55026 0.85592 1 0.79005 0.83968 -0.0505578 6 0.79339 0.84184 -0.0484438 0.994780 0.022186 weaklyHypometh 1 1 insignificant 0.84682 0.071946 insignificant 1 1 insignificant -0.0268288 0.49357 lowCoverage 1 lowCoverage 0.79005 0.73719 0.052973 6 0.79339 0.74476 0.048636 4.4949e-02 0.51783 weaklyHypermeth 1.0000e+00 1 insignificant 2.1499e-01 0.66835 insignificant 1.0000e+00 1 insignificant 0.091094 0.12607939 lowCoverage 1.000000 lowCoverage 0.79005 0.62707 0.1709246 5 0.79339 0.67708 0.116312 2.0890e-07 0.98029 weaklyHypermeth 0.00010445 1 weaklyHypermeth 1.9528e-05 0.97571 weaklyHypermeth 0.019528 1 weaklyHypermeth 0.15405461 0.0054935 lowCoverage 1 lowCoverage 0.83968 0.73719 0.101544 6 0.84184 0.74476 0.097080 6.8640e-03 0.89107 weaklyHypermeth 1.9611e-01 1 insignificant 6.6079e-02 0.78460 insignificant 1.00000000 1 insignificant 0.11792 0.07748996 lowCoverage 1.000000 lowCoverage 0.83968 0.62707 0.2184799 5 0.84184 0.67708 0.1647558 7.1219e-11 0.99284 hypermethylated 7.1219e-08 1 hypermethylated 3.9025e-05 0.99509 hypermethylated 0.039025 1 hypermethylated 0.1808834 0.0024887 weaklyHypermeth 1 insignificant 0.73719 0.62707 0.154685 5 0.74476 0.67708 0.067676 7.4305e-05 9.6435e-01 weaklyHypermeth 0.074305 1.0000e+00 weaklyHypermeth 0.018700 0.95586828 weaklyHypermeth 1 1.000000 insignificant 0.062960 0.31483467 lowCoverage 1.000000 lowCoverage chr18 37749027 37750027 147371 ENSG00000218954 0.75503 90 6 0.69923 106 6 0.73359 63 6 0.71667 72 2 0.76481 36 3 0.59847 54 6 0.64420 63 3 0.78932 54 6 0.57021 53 6 1.00000 13 0 0.55784 132 6 0.80833 26 2 0.857143 61 6 0.703704 41 2 0.71825 35 2 0.70238 22 2 NA 0 0 0.64495 164 6 0.96667 16 2 0.77778 42 6 0.62593 24 2 0.66667 3 0 0.85714 37 2 0.76296 46 6 0.810458 46 2 0.74074 48 6 0.80952 18 0 0.60833 28 4 0.87659 57 2 0.77083 40 6 0.69683 43 6 0.79444 43 6 0.74401 117 6 0.85278 63 6 0.68214 68 6 NA 0 0 0.93254 41 2 0.68056 75 6 0.75183 80 6 0.71505 123 6 0.75753 79 3 0.82069 78 6 0.74702 74 6 0.76712 0.758034 0.73632 0.73333 0.76975 0.71429 0.66727 0.79925 0.57774 1.00000 0.74482 0.80694 0.833333 0.73380 0.846451 0.72817 NA 0.76150 0.95556 0.787037 0.79352 0.72601 0.85119 0.78580 0.80283 0.756173 0.73148 0.611111 0.83545 0.77778 0.82562 0.79537 0.72578 0.845370 0.75238 NA 0.93783 0.68519 0.76435 0.72364 0.76837 0.82759 0.77728 0 0.76434 0.76157 -7.4032e-05 2 0.61491 0.67442 -0.0595142 0.86211 5.8227e-01 lowCoverage 1 1.000000 lowCoverage 0.96673 0.5171717 lowCoverage 1 1 lowCoverage -0.0144104 0.69782 lowCoverage 1 lowCoverage 0.76388 0.76099 0.0017414 6 0.62927 0.69711 -0.067837 4.5696e-01 6.8118e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.1597e-01 0.49624833 insignificant 1.0000e+00 1.00000 insignificant -0.041113 0.4917724 lowCoverage 1.00000 lowCoverage 0.76684 0.78802 -0.0048168 6 0.75570 0.74645 0.0092455 5.0850e-01 0.49331314 insignificant 1.0000e+00 1.00000 insignificant 8.0845e-01 4.4930e-01 insignificant 1.0000e+00 1.000000 insignificant -0.021131 0.5157716 lowCoverage 1.00000 lowCoverage 0.76279 0.76309 -0.0016636 2 0.72426 0.79670 -0.072439 3.7082e-01 0.52911913 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.9500e-01 0.665254 lowCoverage 1.0000e+00 1.000 lowCoverage -0.026702 0.6476564 lowCoverage 1.00000 lowCoverage 0.76402 0.78802 -0.0025449 2 0.76164 0.74645 0.0151834 4.3412e-01 0.630489 lowCoverage 1.0000e+00 1 lowCoverage 5.0276e-01 0.694144 lowCoverage 1.0000e+00 1 lowCoverage -0.0067202 0.8278869 lowCoverage 1.00000 lowCoverage 0.76243 0.78802 0.0011354 6 0.76282 0.74645 0.0163619 3.5887e-01 3.8110e-01 insignificant 1.000000 1.000000 insignificant 0.42739271 0.36420160 insignificant 1.00000 1.00000 insignificant 0.0199820 0.719571 lowCoverage 1.00000 lowCoverage chr18 39772086 39773086 147516 ENSG00000202250 0.87787 176 8 0.87400 274 8 0.83446 116 8 0.92353 69 6 0.92192 73 7 0.85863 148 8 0.82122 73 8 0.85352 196 8 0.85543 95 8 0.92050 149 8 0.89242 312 8 0.85777 94 7 0.869954 265 8 NA 0 0 0.88074 109 8 0.91437 49 3 0.790476 53 5 0.93263 78 6 0.91482 167 8 0.89497 87 8 0.93209 58 6 0.86667 47 3 0.87446 152 8 0.91200 76 8 0.923469 30 3 0.89196 337 8 0.91602 101 8 0.88081 52 3 0.94134 176 8 0.91417 367 8 0.87007 367 8 0.81465 201 8 0.75403 231 8 0.74848 226 8 0.82419 229 8 0.83631 53 3 0.85729 64 7 0.86146 409 8 0.88743 150 8 0.89637 220 8 0.85756 102 6 0.88000 146 7 0.80766 129 7 0.85261 0.869562 0.80854 0.85980 0.92178 0.78840 0.76093 0.81310 0.83805 0.88731 0.83533 0.88148 0.823558 NA 0.845318 0.88114 0.814753 0.89324 0.90475 0.849948 0.91638 0.88549 0.84338 0.88186 0.88608 0.862917 0.87814 0.837070 0.92308 0.86275 0.83323 0.75274 0.70831 0.691588 0.79093 0.72931 0.80156 0.80059 0.86376 0.84424 0.89571 0.87353 0.85941 3 0.88463 0.90631 -1.1380e-02 8 0.88144 0.89521 -0.0137698 0.96855 1.9467e-01 insignificant 1 1.000000 insignificant 0.97381 0.0973334 insignificant 1 1 insignificant -0.0164287 0.23692 insignificant 1 insignificant 0.88463 0.81436 0.0793539 8 0.88144 0.81138 0.070063 3.1543e-08 9.9999e-01 weaklyHypermeth 1.2132e-06 1.0000000 weaklyHypermeth 1.1954e-05 0.99991234 weaklyHypermeth 1.4943e-03 1.00000 weaklyHypermeth 0.064753 0.0231276 weaklyHypermeth 0.71985 insignificant 0.88463 0.87416 -0.0063340 8 0.88144 0.88587 -0.0044255 4.4300e-01 0.50476159 insignificant 1.0000e+00 1.00000 insignificant 5.4712e-01 4.6595e-01 insignificant 1.0000e+00 1.000000 insignificant 0.012578 0.5123832 insignificant 1.00000 insignificant 0.90631 0.81436 0.0884969 8 0.89521 0.81138 0.083833 1.8281e-09 0.99999999 weaklyHypermeth 1.0156e-07 1.000000 weaklyHypermeth 3.6921e-06 0.999998 weaklyHypermeth 6.5347e-04 1.000 weaklyHypermeth 0.081182 0.0082736 weaklyHypermeth 0.33375 insignificant 0.90631 0.87416 0.0048554 8 0.89521 0.88587 0.0093443 2.3837e-01 0.841869 insignificant 1.0000e+00 1 insignificant 1.9014e-01 0.883852 insignificant 1.0000e+00 1 insignificant 0.0290063 0.1660820 insignificant 1.00000 insignificant 0.81436 0.87416 -0.0961892 8 0.81138 0.88587 -0.0744882 9.9961e-01 7.1676e-05 weaklyHypometh 1.000000 0.007964 weaklyHypometh 0.99614907 0.00065029 weaklyHypometh 1.00000 0.10838 insignificant -0.0521759 0.075815 insignificant 1.00000 insignificant chr18 40626268 40627268 147611 SETBP1 ENSG00000152217 0.72508 92 5 0.66754 124 5 0.62628 103 5 0.87252 64 3 0.75801 42 4 0.72806 149 5 0.65714 76 4 0.75500 88 5 0.74933 78 5 0.68889 73 5 0.78164 144 5 0.55683 54 4 0.602796 93 4 0.722222 8 0 0.66743 59 5 0.70348 30 3 0.564848 49 5 0.73178 79 5 0.75246 80 4 0.73723 141 5 0.85476 35 4 0.56099 43 3 0.69026 83 5 0.58706 74 5 0.811111 32 3 0.77751 116 5 0.60453 50 4 0.64667 44 3 0.58096 88 5 0.75616 107 5 0.76889 142 5 0.80726 157 5 0.82559 118 5 0.94048 91 5 1.00000 20 1 0.73333 13 0 0.91652 94 5 0.84493 125 5 0.65167 105 5 0.74556 71 5 0.44212 68 4 0.41342 82 4 0.74606 81 4 0.83053 0.740930 0.61825 0.80508 0.78784 0.80255 0.70195 0.82205 0.75109 0.73864 0.80823 0.59102 0.608146 0.74821 0.679452 0.73320 0.648264 0.71449 0.79718 0.750380 0.85180 0.64792 0.70006 0.61936 0.86919 0.776189 0.61218 0.767879 0.66491 0.79299 0.78727 0.83587 0.84343 0.975974 NA 0.71667 0.91981 0.86735 0.73803 0.77687 0.61034 0.59812 0.64033 2 0.72202 0.74665 -2.8191e-02 5 0.70487 0.73745 -0.0325805 0.86506 1.3976e-01 insignificant 1 1.000000 insignificant 0.90154 0.3824263 insignificant 1 1 insignificant -0.0014167 0.96779 lowCoverage 1 lowCoverage 0.72202 0.87636 -0.1705508 5 0.70487 0.87639 -0.171523 1.0000e+00 1.4025e-06 weaklyHypometh 1.0000e+00 0.0010309 weaklyHypometh 1.0000e+00 0.00010275 weaklyHypometh 1.0000e+00 0.10275 insignificant -0.174380 0.0043928 lowCoverage 0.24404 lowCoverage 0.72202 0.74693 0.0572883 5 0.70487 0.61393 0.0909349 2.1256e-02 0.89901606 weaklyHypermeth 9.1947e-01 1.00000 insignificant 6.4519e-02 9.2746e-01 insignificant 1.0000e+00 1.000000 insignificant 0.102662 0.2329148 lowCoverage 1.00000 lowCoverage 0.74665 0.87636 -0.1379062 5 0.73745 0.87639 -0.138943 9.9999e-01 0.00010320 weaklyHypometh 1.0000e+00 0.067642 weaklyHypometh 9.9997e-01 0.000993 weaklyHypometh 1.0000e+00 0.993 insignificant -0.172963 0.0047379 lowCoverage 0.21536 lowCoverage 0.74665 0.74693 0.0774510 5 0.73745 0.61393 0.1235154 1.1404e-02 0.936718 weaklyHypermeth 3.8012e-01 1 insignificant 2.0397e-01 0.935014 insignificant 1.0000e+00 1 insignificant 0.1040787 0.2375213 lowCoverage 1.00000 lowCoverage 0.87636 0.74693 0.2134084 5 0.87639 0.61393 0.2624583 1.8071e-05 9.9992e-01 hypermethylated 0.011194 1.000000 hypermethylated 0.00046109 0.99983001 hypermethylated 0.46109 1.00000 insignificant 0.2770418 0.014228 lowCoverage 0.74885 lowCoverage chr18 41986652 41987652 147755 ENSG00000200088 0.41713 82 5 0.34380 133 5 0.47325 119 5 0.39552 35 3 0.28373 63 4 0.60339 66 3 0.41390 104 5 0.24413 71 5 0.34919 130 5 0.43026 93 5 0.48119 141 5 0.38755 60 4 0.382263 144 5 0.933333 15 1 0.34764 121 5 0.38730 52 4 0.266667 68 4 0.40154 37 2 0.47246 94 5 0.31844 99 5 0.52071 33 4 0.15172 41 2 0.40957 115 5 0.59365 34 5 0.533333 15 1 0.38803 186 5 0.27303 41 4 0.62500 13 1 0.47266 71 5 0.41477 163 5 0.53003 148 5 0.49492 123 5 0.17652 99 5 0.24023 122 5 0.57576 143 4 0.33333 6 0 0.32500 55 4 0.33500 111 5 0.34792 99 4 0.34764 97 5 0.33373 33 4 0.39638 64 5 0.18500 53 2 0.44363 0.335254 0.46738 0.43639 0.28629 0.55010 0.42471 0.25114 0.34654 0.42554 0.48352 0.38404 0.354520 NA 0.347155 0.47738 0.263058 0.36741 0.48307 0.295666 0.48919 0.15971 0.39569 0.56788 0.51535 0.389867 0.28481 0.461971 0.46070 0.41340 0.53571 0.49465 0.20823 0.236827 0.63118 0.32093 0.32822 0.34107 0.35152 0.35543 0.34190 0.38633 0.19474 0 0.43023 0.50153 -4.5964e-02 5 0.39635 0.44638 -0.0500301 0.99344 7.7482e-03 weaklyHypometh 1 1.000000 insignificant 0.97508 0.0220466 weaklyHypometh 1 1 insignificant -0.0339866 0.51024 lowCoverage 1 lowCoverage 0.43023 0.41791 0.0385247 5 0.39635 0.34581 0.050538 2.5657e-03 8.3294e-01 weaklyHypermeth 5.5777e-02 1.0000000 weaklyHypermeth 1.2685e-02 0.98470670 weaklyHypermeth 3.1712e-01 1.00000 insignificant 0.085660 0.2168004 lowCoverage 1.00000 lowCoverage 0.43023 0.44509 0.0244995 4 0.39635 0.35457 0.0417808 2.1599e-02 0.79730714 lowCoverage 9.1947e-01 1.00000 lowCoverage 1.4810e-02 8.5655e-01 lowCoverage 9.2564e-01 1.000000 lowCoverage 0.094499 0.0764574 lowCoverage 1.00000 lowCoverage 0.50153 0.41791 0.0838312 5 0.44638 0.34581 0.100568 3.8278e-04 0.93915446 weaklyHypermeth 9.8148e-03 1.000000 weaklyHypermeth 1.4692e-02 0.990263 weaklyHypermeth 3.6079e-01 1.000 insignificant 0.119647 0.1073585 lowCoverage 1.00000 lowCoverage 0.50153 0.44509 0.0691987 4 0.44638 0.35457 0.0918110 5.4117e-04 0.910508 lowCoverage 2.6000e-02 1 lowCoverage 2.4816e-03 0.954691 lowCoverage 1.9089e-01 1 lowCoverage 0.1284855 0.0309234 lowCoverage 1.00000 lowCoverage 0.41791 0.44509 -0.0125837 4 0.34581 0.35457 -0.0087567 6.7522e-01 3.9186e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.74424514 0.53613814 lowCoverage 1.00000 1.00000 lowCoverage 0.0088386 0.896689 lowCoverage 1.00000 lowCoverage chr18 43341091 43342091 147845 ENSG00000215474 0.19002 455 7 0.14174 483 9 0.24726 312 7 0.18985 324 9 0.14048 236 9 0.44054 614 9 0.17170 333 7 0.21655 292 7 0.21175 413 7 0.38084 246 7 0.23749 387 9 0.20973 158 7 0.065728 288 7 0.052564 39 3 0.16037 288 7 0.26951 124 7 0.091518 239 7 0.22412 334 7 0.13732 221 7 0.20221 532 9 0.42440 86 7 0.13447 201 7 0.30673 283 9 0.22022 150 9 0.092243 83 5 0.15815 517 9 0.21797 234 7 0.20603 115 7 0.22967 301 7 0.21045 574 9 0.24617 538 9 0.34005 503 9 0.26373 345 9 0.20492 252 7 0.33727 250 5 0.33519 84 5 0.34161 195 9 0.37956 489 9 0.21075 534 9 0.39714 436 9 0.23685 372 9 0.41171 467 7 0.27984 374 9 0.12869 0.076025 0.18653 0.08696 0.12947 0.29593 0.17872 0.14634 0.10848 0.15435 0.19428 0.21115 0.051922 0.10553 0.057874 0.22920 0.072357 0.13521 0.08890 0.075014 0.27956 0.11614 0.19233 0.12079 0.11749 0.089054 0.10654 0.087751 0.10460 0.10731 0.14790 0.24837 0.17681 0.085222 0.24239 0.31688 0.31045 0.46192 0.11990 0.22393 0.16394 0.17464 0.17570 7 0.15954 0.16951 -4.8238e-03 9 0.22053 0.23545 -0.0149171 0.85203 2.6205e-01 insignificant 1 1.000000 insignificant 0.76779 0.1817292 insignificant 1 1 insignificant -0.0331489 0.33181 insignificant 1 insignificant 0.15954 0.27802 -0.1229771 9 0.22053 0.30753 -0.087003 6.4942e-01 2.0618e-06 weaklyHypometh 1.0000e+00 0.0010309 weaklyHypometh 9.8762e-01 0.00145490 weaklyHypometh 1.0000e+00 0.72745 insignificant -0.111315 0.0058688 weaklyHypometh 0.29344 insignificant 0.15954 0.17553 -0.0327262 9 0.22053 0.28814 -0.0676108 9.6718e-01 0.00031389 weaklyHypometh 1.0000e+00 0.31389 insignificant 9.8272e-01 5.3093e-05 weaklyHypometh 1.0000e+00 0.053093 weaklyHypometh -0.108192 0.0562345 insignificant 1.00000 insignificant 0.16951 0.27802 -0.1216253 9 0.23545 0.30753 -0.072086 1.7606e-01 0.00013528 weaklyHypometh 1.0000e+00 0.067642 weaklyHypometh 9.6390e-01 0.010367 weaklyHypometh 1.0000e+00 1.000 insignificant -0.078166 0.0530855 insignificant 1.00000 insignificant 0.17015 0.17545 -0.0302302 9 0.28690 0.25932 0.0275756 9.9200e-01 0.016062 weaklyHypometh 1.0000e+00 1 insignificant 9.9846e-01 0.012290 weaklyHypometh 1.0000e+00 1 insignificant -0.0750432 0.1658462 insignificant 1.00000 insignificant 0.27802 0.17553 0.0929506 9 0.30753 0.28814 0.0193924 1.5134e-01 8.2291e-02 insignificant 1.000000 1.000000 insignificant 0.48734568 0.31350171 insignificant 1.00000 1.00000 insignificant 0.0031225 0.950773 insignificant 1.00000 insignificant chr18 43965866 43966866 147901 ENSG00000206944 0.82467 363 6 0.66677 222 6 0.73716 173 6 0.75279 232 6 0.70019 84 6 0.84836 377 6 0.78401 139 6 0.84694 241 6 0.71973 152 6 0.71760 225 6 0.80563 395 8 0.71504 90 4 0.688595 252 6 0.486610 81 3 0.85054 233 6 0.79346 69 6 0.803909 96 4 0.55903 258 6 0.77850 346 6 0.85540 289 6 0.83470 128 6 0.46704 76 4 0.75522 177 8 0.73081 60 5 0.430014 68 4 0.71601 399 8 0.74638 175 6 0.52659 61 6 0.75860 368 6 0.76933 521 6 0.69315 359 6 0.85397 413 6 0.39828 276 8 0.78409 284 6 0.48966 260 8 0.21303 69 4 0.40984 121 8 0.19382 606 8 0.18531 444 6 0.51613 414 6 0.50304 276 6 0.42383 380 6 0.32067 371 6 0.75807 0.663524 0.73385 0.77566 0.77006 0.78282 0.78564 0.77175 0.73301 0.77044 0.76843 0.75654 0.705866 0.74556 0.787523 0.75354 0.761594 0.46885 0.76238 0.793945 0.82331 0.39719 0.78484 0.85346 0.66197 0.828377 0.84219 0.830461 0.76911 0.79256 0.78980 0.84437 0.44858 0.806388 0.31535 0.23612 0.56633 0.24035 0.19641 0.41747 0.43267 0.39865 0.34465 4 0.73778 0.78900 -4.6682e-02 6 0.71313 0.72267 -0.0095432 0.90200 2.0416e-02 weaklyHypometh 1 1.000000 insignificant 0.90232 0.1107551 insignificant 1 1 insignificant 0.0565972 0.23090 insignificant 1 insignificant 0.73778 0.42928 0.3022597 6 0.71313 0.40664 0.306494 7.8302e-16 9.9974e-01 hypermethylated 1.3050e-13 1.0000000 hypermethylated 3.5659e-05 0.99999472 hypermethylated 2.5528e-03 1.00000 hypermethylated 0.331963 0.0117852 weaklyHypermeth 0.42090 insignificant 0.73778 0.34660 0.3821240 6 0.71313 0.41771 0.2954148 2.9580e-32 0.99976671 hypermethylated 1.4790e-29 1.00000 hypermethylated 2.8979e-14 9.9973e-01 hypermethylated 1.4490e-11 1.000000 hypermethylated 0.356953 0.0027943 weaklyHypermeth 0.39918 insignificant 0.78788 0.42822 0.3567183 6 0.59128 0.33270 0.258576 2.8017e-10 1.00000000 hypermethylated 2.0012e-08 1.000000 hypermethylated 2.7784e-04 1.000000 hypermethylated 1.3892e-02 1.000 hypermethylated 0.275365 0.0241171 weaklyHypermeth 0.70933 insignificant 0.78816 0.34642 0.4302489 6 0.65041 0.37594 0.2744622 3.9074e-24 0.984334 hypermethylated 1.9537e-21 1 hypermethylated 4.9509e-09 0.995268 hypermethylated 1.6503e-06 1 hypermethylated 0.3003554 0.0039897 weaklyHypermeth 0.42596 insignificant 0.42901 0.34642 0.0619457 6 0.36597 0.37594 -0.0099714 2.0469e-01 3.8848e-01 insignificant 1.000000 1.000000 insignificant 0.63739648 0.60374055 insignificant 1.00000 1.00000 insignificant 0.0249899 0.821626 insignificant 1.00000 insignificant chr18 43966275 43967275 147902 ENSG00000206944 0.82467 363 6 0.66677 222 6 0.73716 173 6 0.75279 232 6 0.70019 84 6 0.84836 377 6 0.78401 139 6 0.84694 241 6 0.71973 152 6 0.71760 225 6 0.80563 395 8 0.71504 90 4 0.688595 252 6 0.486610 81 3 0.85054 233 6 0.79346 69 6 0.803909 96 4 0.55903 258 6 0.77850 346 6 0.85540 289 6 0.83470 128 6 0.46704 76 4 0.75522 177 8 0.73081 60 5 0.430014 68 4 0.71601 399 8 0.74638 175 6 0.52659 61 6 0.75860 368 6 0.76933 521 6 0.69315 359 6 0.85397 413 6 0.39828 276 8 0.78409 284 6 0.48966 260 8 0.21303 69 4 0.40984 121 8 0.19382 606 8 0.18531 444 6 0.51613 414 6 0.50304 276 6 0.42383 380 6 0.32067 371 6 0.75807 0.663524 0.73385 0.77566 0.77006 0.78282 0.78564 0.77175 0.73301 0.77044 0.76843 0.75654 0.705866 0.74556 0.787523 0.75354 0.761594 0.46885 0.76238 0.793945 0.82331 0.39719 0.78484 0.85346 0.66197 0.828377 0.84219 0.830461 0.76911 0.79256 0.78980 0.84437 0.44858 0.806388 0.31535 0.23612 0.56633 0.24035 0.19641 0.41747 0.43267 0.39865 0.34465 4 0.73778 0.78900 -4.6682e-02 6 0.71313 0.72267 -0.0095432 0.90200 2.0416e-02 weaklyHypometh 1 1.000000 insignificant 0.90232 0.1107551 insignificant 1 1 insignificant 0.0565972 0.23090 insignificant 1 insignificant 0.73778 0.42928 0.3022597 6 0.71313 0.40664 0.306494 7.8302e-16 9.9974e-01 hypermethylated 1.3050e-13 1.0000000 hypermethylated 3.5659e-05 0.99999472 hypermethylated 2.5528e-03 1.00000 hypermethylated 0.331963 0.0117852 weaklyHypermeth 0.42090 insignificant 0.73778 0.34660 0.3821240 6 0.71313 0.41771 0.2954148 2.9580e-32 0.99976671 hypermethylated 1.4790e-29 1.00000 hypermethylated 2.8979e-14 9.9973e-01 hypermethylated 1.4490e-11 1.000000 hypermethylated 0.356953 0.0027943 weaklyHypermeth 0.39918 insignificant 0.78788 0.42822 0.3567183 6 0.59128 0.33270 0.258576 2.8017e-10 1.00000000 hypermethylated 2.0012e-08 1.000000 hypermethylated 2.7784e-04 1.000000 hypermethylated 1.3892e-02 1.000 hypermethylated 0.275365 0.0241171 weaklyHypermeth 0.70933 insignificant 0.78816 0.34642 0.4302489 6 0.65041 0.37594 0.2744622 3.9074e-24 0.984334 hypermethylated 1.9537e-21 1 hypermethylated 4.9509e-09 0.995268 hypermethylated 1.6503e-06 1 hypermethylated 0.3003554 0.0039897 weaklyHypermeth 0.42596 insignificant 0.42901 0.34642 0.0619457 6 0.36597 0.37594 -0.0099714 2.0469e-01 3.8848e-01 insignificant 1.000000 1.000000 insignificant 0.63739648 0.60374055 insignificant 1.00000 1.00000 insignificant 0.0249899 0.821626 insignificant 1.00000 insignificant chr18 44489622 44490622 147925 KIAA0427 ENSG00000134030 0.49042 106 4 0.30044 170 8 0.46370 152 8 0.47398 108 5 0.35383 85 5 0.80343 109 6 0.49369 155 5 0.49559 94 5 0.44453 106 5 0.47227 52 4 0.52529 156 5 0.47971 92 4 0.317391 109 5 0.619048 18 2 0.47878 128 5 0.33772 99 4 0.270684 109 3 0.43776 126 2 0.33115 138 5 0.44370 126 8 0.83008 53 4 0.39881 21 3 0.33598 85 5 0.33592 61 5 0.888889 15 1 0.45588 204 8 0.42533 51 5 0.64810 41 4 0.46065 105 5 0.35559 216 8 0.46782 208 8 0.72850 121 8 0.78401 123 8 0.74598 90 5 0.86905 183 6 0.20000 39 3 0.84835 71 4 0.39355 230 9 0.34517 150 8 0.72983 135 5 0.34014 78 3 0.50812 112 4 0.60197 75 6 0.49893 0.460104 0.53687 0.60581 0.43694 0.74984 0.56296 0.60365 0.51918 0.48522 0.58659 0.58041 0.396974 0.61211 0.574621 0.43748 0.484226 0.47269 0.41216 0.497931 0.81736 0.50593 0.59853 0.52793 0.76317 0.554958 0.43373 0.688141 0.58542 0.49815 0.60992 0.76120 0.81033 0.782157 0.93423 0.29524 0.83452 0.33425 0.53160 0.64507 0.41831 0.61305 0.71404 2 0.49777 0.51780 -5.1076e-02 5 0.52324 0.40011 0.1231305 0.58625 1.2648e-01 insignificant 1 1.000000 insignificant 0.91996 0.1020732 insignificant 1 1 insignificant -0.0759737 0.24186 lowCoverage 1 lowCoverage 0.49754 0.66304 -0.1539229 5 0.47285 0.67540 -0.202544 1.0000e+00 4.6413e-05 weaklyHypometh 1.0000e+00 0.0154709 weaklyHypometh 9.9999e-01 0.00425493 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.188502 0.1591017 lowCoverage 1.00000 lowCoverage 0.49754 0.67273 -0.0660429 4 0.47285 0.53882 -0.0659630 9.8060e-01 0.06851140 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.7088e-01 1.4352e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.053391 0.5324257 lowCoverage 1.00000 lowCoverage 0.51830 0.66304 -0.1301772 7 0.39644 0.67540 -0.278963 9.9999e-01 0.00620836 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9998e-01 0.010612 weaklyHypometh 1.0000e+00 1.000 insignificant -0.112528 0.3998832 insignificant 1.00000 insignificant 0.51830 0.67273 -0.0148255 4 0.39644 0.53882 -0.1423818 9.1061e-01 0.580203 lowCoverage 1.0000e+00 1 lowCoverage 7.1127e-01 0.343610 lowCoverage 1.0000e+00 1 lowCoverage 0.0225827 0.8154703 insignificant 1.00000 insignificant 0.66304 0.67273 0.1075654 4 0.67540 0.53882 0.1365813 2.1418e-01 9.9651e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.28749991 0.99917161 lowCoverage 1.00000 1.00000 lowCoverage 0.1351109 0.346860 insignificant 1.00000 insignificant chr18 44547389 44548389 147930 KIAA0427 ENSG00000134030 0.83188 78 3 0.63948 353 5 0.59527 103 5 0.88539 132 5 0.85437 97 4 0.87582 69 5 0.55385 42 3 0.80556 120 5 0.74643 48 3 0.96784 64 3 0.84845 302 5 0.54667 51 3 0.746561 107 3 0.668254 59 5 0.78058 115 3 0.83333 24 3 1.000000 3 0 0.29959 141 3 0.81355 277 3 0.84795 77 5 0.98749 99 3 0.43785 54 3 0.89990 171 5 0.86506 122 5 0.866667 45 3 0.83978 290 5 0.80557 143 3 0.81533 62 5 0.82160 212 5 0.92046 256 5 0.79411 311 5 0.91458 260 5 0.42667 210 5 0.44417 119 5 0.78947 38 2 0.20000 8 0 0.41511 292 5 0.44224 348 5 0.57375 111 5 0.44733 121 5 0.54839 101 3 0.15111 64 5 0.52366 142 5 0.87892 0.675245 0.64958 0.89797 0.83987 0.93326 0.77857 0.83850 0.74067 0.94778 0.90642 0.57052 0.739321 0.74763 0.797337 0.92797 0.982553 0.47233 0.84807 0.875495 0.97986 0.39849 0.87307 0.88912 0.86355 0.855923 0.83648 0.766332 0.83277 0.91352 0.80679 0.90578 0.37948 0.405479 0.40483 0.30653 0.52036 0.30960 0.66631 0.47746 0.57659 0.17923 0.65222 3 0.77630 0.85383 -7.7354e-02 5 0.75109 0.85445 -0.1033655 0.99995 5.8599e-05 weaklyHypometh 1 0.058599 weaklyHypometh 0.99605 0.0060667 weaklyHypometh 1 1 insignificant -0.0736605 0.18360 lowCoverage 1 lowCoverage 0.77630 0.42365 0.3629170 5 0.75109 0.44795 0.303142 4.6322e-14 9.9997e-01 hypermethylated 4.2111e-12 1.0000000 hypermethylated 1.6398e-07 0.99999619 hypermethylated 6.7414e-05 1.00000 hypermethylated 0.304097 0.0084855 lowCoverage 0.33942 lowCoverage 0.77630 0.52319 0.2444948 5 0.75109 0.47839 0.2726955 5.2870e-11 1.00000000 hypermethylated 7.5529e-09 1.00000 hypermethylated 1.9155e-08 1.0000e+00 hypermethylated 4.7887e-06 1.000000 hypermethylated 0.308194 0.0115487 lowCoverage 0.85783 lowCoverage 0.85383 0.42365 0.4346545 5 0.85445 0.44795 0.406508 3.9453e-18 1.00000000 hypermethylated 1.3151e-15 1.000000 hypermethylated 3.5935e-08 1.000000 hypermethylated 3.5935e-05 1.000 hypermethylated 0.377758 0.0026814 lowCoverage 0.16759 lowCoverage 0.85383 0.52319 0.3305955 5 0.85445 0.47839 0.3760610 7.9051e-19 1.000000 hypermethylated 2.6350e-16 1 hypermethylated 3.2918e-09 1.000000 hypermethylated 1.6503e-06 1 hypermethylated 0.3818543 0.0042596 lowCoverage 0.42596 lowCoverage 0.42365 0.52319 -0.1032215 5 0.44795 0.47839 -0.0304467 4.4265e-01 1.3142e-01 insignificant 1.000000 1.000000 insignificant 0.75078408 0.22865103 insignificant 1.00000 1.00000 insignificant 0.0040965 0.970963 lowCoverage 1.00000 lowCoverage chr18 51815847 51816847 148544 TCF4 ENSG00000196628 0.68635 274 5 0.65356 206 5 0.81643 30 2 0.64550 182 5 0.60430 53 5 0.70602 277 5 0.91748 40 2 0.66078 99 5 0.77727 28 2 0.83333 21 1 0.89899 222 5 0.60000 7 0 0.51429 18 2 0.68667 29 5 0.84848 29 2 1.00000 10 1 NA 0 0 0.43845 225 5 0.68699 106 2 0.73460 190 5 0.89545 33 2 0.13333 11 1 0.87500 85 4 0.67269 61 5 0.75969 148 4 0.57697 184 5 0.65833 40 4 0.975000 14 1 0.72582 88 5 0.64551 202 5 0.50629 226 5 0.89164 240 5 0.11818 166 5 0.011765 97 5 0.20000 96 2 0.034483 95 4 0.15776 171 5 0.16444 250 5 0.25935 333 5 0.33264 216 5 0.28815 221 5 0.18128 164 2 0.28519 213 5 0.73685 0.68397 0.74028 0.70006 0.75417 0.81507 0.81806 0.71148 0.67829 0.91379 0.89286 0.89655 0.60545 0.88966 0.86416 NA NA 0.47145 0.78195 0.76119 0.89538 0.16954 0.79095 0.53149 0.80484 0.77237 0.64050 0.92423 0.74720 0.72161 0.71595 0.86085 0.061129 0.0060852 0.10345 0.07659 0.12068 0.085057 0.36024 0.46210 0.32914 0.23843 0.35448 1 0.73447 0.73949 -0.020906 5 0.66625 0.57923 0.0870271 0.50720 0.505720 insignificant 1 1 insignificant 0.75509 0.68297 insignificant 1 1 insignificant 0.0285757 0.70024 lowCoverage 1 lowCoverage 0.73493 0.12686 0.568777 5 0.69950 0.15119 0.548308 8.1737e-33 1.0000e+00 hypermethylated 4.0868e-30 1.000000 hypermethylated 6.2682e-11 1.000000 hypermethylated 6.2682e-08 1 hypermethylated 0.607113 2.3053e-10 lowCoverage 2.3053e-07 lowCoverage 0.73493 0.29468 0.360668 5 0.69950 0.27527 0.424232 7.9541e-23 1.00000 hypermethylated 3.9770e-20 1 hypermethylated 3.7075e-09 1.00000 hypermethylated 1.8537e-06 1 hypermethylated 0.452231 2.2796e-09 lowCoverage 2.2796e-06 lowCoverage 0.74005 0.12686 0.574760 5 0.69507 0.15119 0.543876 2.5553e-22 1.00000000 hypermethylated 1.2777e-19 1.00000 hypermethylated 1.6380e-09 1.000000 hypermethylated 1.6380e-06 1 hypermethylated 0.578538 9.2569e-07 lowCoverage 0.00030856 lowCoverage 0.74005 0.29468 0.3958497 5 0.69507 0.27527 0.4197992 2.5042e-15 1.000000 hypermethylated 1.2521e-12 1 hypermethylated 1.6750e-07 1.000000 hypermethylated 8.3752e-05 1 hypermethylated 0.423655 3.3091e-05 lowCoverage 0.033091 lowCoverage 0.12686 0.29468 -0.1751574 5 0.15119 0.27527 -0.1240768 0.999870 7.9417e-08 weaklyHypometh 1 9.9271e-06 weaklyHypometh 0.99984 0.00037592 weaklyHypometh 1 0.04699 weaklyHypometh -0.15488230 0.003696 lowCoverage 0.41067 lowCoverage chr18 52866894 52867894 148731 ENSG00000212539 0.79913 234 6 0.95045 72 5 0.65000 30 2 0.91125 290 6 0.70000 11 1 0.82595 224 6 0.62500 20 1 0.80451 92 7 0.81944 43 5 0.92500 44 5 0.90275 146 6 0.75000 10 1 0.74959 105 4 0.92347 42 3 0.69388 53 5 0.60000 19 1 1.00000 2 0 0.78641 372 6 0.94023 116 6 0.94824 150 6 0.77114 47 5 0.78476 126 6 0.83362 79 7 0.73127 41 3 0.83589 104 6 0.81657 140 7 0.88395 114 6 0.842593 21 1 0.84175 99 6 0.92061 118 5 0.64647 142 7 0.91869 210 7 0.53276 86 4 0.376389 164 6 0.58667 42 4 0.600000 34 4 0.33050 87 3 0.59833 207 7 0.59212 122 6 0.71590 237 6 0.56889 160 6 0.59690 169 6 0.69626 107 6 0.84169 0.93244 0.72387 0.87011 0.78955 0.82077 0.75676 0.90390 0.85905 0.95270 0.91257 0.81041 0.80374 0.92181 0.71380 0.48198 0.88069 0.69409 0.95013 0.95353 0.92814 0.66820 0.84678 0.58555 0.95123 0.90462 0.88369 0.76736 0.82271 0.88610 0.62847 0.88199 0.601101 0.2957207 0.58051 0.56505 0.41871 0.599034 0.61405 0.64718 0.46156 0.57241 0.65025 1 0.84048 0.81789 0.018363 6 0.80743 0.77690 0.0305263 0.45833 0.664012 insignificant 1 1 insignificant 0.73070 0.66417 insignificant 1 1 insignificant -0.0036762 0.91718 lowCoverage 1 lowCoverage 0.84048 0.46452 0.354787 6 0.80743 0.42077 0.386666 1.0972e-17 1.0000e+00 hypermethylated 2.1944e-15 1.000000 hypermethylated 1.2919e-05 0.999985 hypermethylated 1.1450e-03 1 hypermethylated 0.311157 4.7634e-04 lowCoverage 4.7634e-02 lowCoverage 0.84029 0.61258 0.228465 6 0.80135 0.62164 0.179709 2.5828e-11 0.99994 hypermethylated 8.6093e-09 1 hypermethylated 7.2274e-07 0.99953 hypermethylated 2.4091e-04 1 hypermethylated 0.181252 8.0889e-04 lowCoverage 2.1261e-01 lowCoverage 0.81789 0.46452 0.363380 6 0.77690 0.42077 0.356139 2.8074e-12 0.99999900 hypermethylated 3.1194e-10 1.00000 hypermethylated 1.6967e-05 0.999997 hypermethylated 1.5772e-03 1 hypermethylated 0.314833 5.8206e-04 lowCoverage 0.05291423 lowCoverage 0.81612 0.61258 0.2245074 6 0.76503 0.62164 0.1433929 2.8771e-08 0.997737 hypermethylated 9.5904e-06 1 hypermethylated 2.6387e-06 0.997596 hypermethylated 8.7957e-04 1 hypermethylated 0.184929 8.7084e-04 weaklyHypermeth 0.217710 insignificant 0.48398 0.61258 -0.1108997 6 0.47558 0.62164 -0.1460575 0.980686 1.0953e-01 insignificant 1 1.0000e+00 insignificant 0.92184 0.39324345 insignificant 1 1.00000 insignificant -0.12990437 0.053576 lowCoverage 1.00000 lowCoverage chr18 52972130 52973130 148741 ENSG00000177529 0.80382 271 6 0.69985 173 6 0.69164 115 4 0.58953 284 4 0.80884 71 4 0.67970 279 6 0.61447 115 4 0.65625 127 6 0.84339 103 4 0.75447 132 4 0.85662 225 6 0.86987 45 4 0.89026 147 6 0.80625 26 4 0.83613 139 4 0.91176 46 4 0.64837 70 4 0.61564 307 5 0.81308 98 6 0.78990 201 6 0.90052 93 6 0.54988 137 6 0.77433 115 4 0.84345 75 4 0.73353 78 4 0.83440 198 6 0.83447 97 6 0.724963 85 4 0.80398 200 6 0.85455 220 6 0.84259 208 6 0.83642 269 6 0.40513 201 6 0.247460 140 6 0.26683 421 6 0.360105 67 6 0.46097 80 5 0.90003 187 6 0.34397 340 6 0.32225 277 6 0.60078 244 6 0.42358 265 6 0.40327 293 6 0.84532 0.77654 0.83560 0.87027 0.82885 0.82624 0.78931 0.78414 0.78393 0.88152 0.84336 0.85962 0.87260 0.78809 0.89294 0.88373 0.82058 0.74484 0.88347 0.86630 0.87698 0.64025 0.85751 0.89737 0.75612 0.80570 0.85817 0.89338 0.84424 0.88740 0.86121 0.85309 0.592567 0.3699315 0.50112 0.51582 0.68483 0.911777 0.46660 0.38778 0.67551 0.55079 0.59804 4 0.81406 0.82761 -0.016387 4 0.76596 0.81240 -0.0464424 0.95976 0.072286 lowCoverage 1 1 lowCoverage 0.93127 0.07898 lowCoverage 1 1 lowCoverage -0.0354321 0.31938 lowCoverage 1 lowCoverage 0.81406 0.51734 0.212612 4 0.76596 0.43847 0.327488 3.1227e-13 1.0000e+00 lowCoverage 2.4021e-11 1.000000 lowCoverage 1.8510e-06 1.000000 lowCoverage 2.8450e-04 1 lowCoverage 0.318905 2.1309e-02 lowCoverage 9.6861e-01 lowCoverage 0.81406 0.50599 0.300954 4 0.76596 0.41050 0.355464 3.5261e-27 1.00000 lowCoverage 3.5261e-24 1 lowCoverage 2.8156e-13 1.00000 lowCoverage 2.8156e-10 1 lowCoverage 0.340223 8.5044e-04 lowCoverage 2.1261e-01 lowCoverage 0.82761 0.51734 0.263741 6 0.81240 0.43847 0.373931 1.1415e-11 0.99999998 hypermethylated 1.0377e-09 1.00000 hypermethylated 4.8099e-06 1.000000 hypermethylated 8.0166e-04 1 hypermethylated 0.354337 1.3779e-02 weaklyHypermeth 0.76549728 insignificant 0.82761 0.50599 0.3355343 6 0.81240 0.41050 0.4019065 4.0114e-23 1.000000 hypermethylated 4.0114e-20 1 hypermethylated 1.1023e-11 1.000000 hypermethylated 1.1023e-08 1 hypermethylated 0.375655 3.7902e-04 hypermethylated 0.126339 insignificant 0.51734 0.50599 0.0802326 6 0.43847 0.41050 0.0279759 0.045976 7.2699e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.21533 0.81418719 insignificant 1 1.00000 insignificant 0.02131807 0.850862 insignificant 1.00000 insignificant chr18 53189622 53190622 148763 ST8SIA3 ENSG00000177511 0.73845 178 6 0.63292 164 6 0.49444 68 4 0.74738 127 6 0.57727 37 4 0.74391 233 6 0.72834 69 4 0.70513 114 6 0.48611 67 6 0.73997 47 3 0.69806 243 6 0.44928 28 1 0.79974 115 6 0.72348 29 4 0.74435 84 6 0.74912 44 6 0.72222 15 1 0.69185 131 6 0.64829 135 4 0.67252 195 6 0.73492 51 4 0.70370 53 4 0.79738 103 6 0.64141 62 1 0.72917 43 6 0.72872 187 6 0.78815 68 5 0.586835 41 4 0.69339 115 6 0.73811 187 6 0.71809 155 6 0.79124 226 6 0.64622 156 6 0.677160 69 6 0.49789 141 6 0.705556 23 1 0.67383 90 2 0.68784 152 6 0.85091 129 6 0.76207 143 6 0.64852 164 6 0.71706 118 6 0.69617 161 6 0.81729 0.70799 0.71027 0.81662 0.72086 0.80329 0.70779 0.78674 0.62998 0.81534 0.82297 0.63221 0.81643 0.71781 0.79533 0.81913 0.78527 0.78974 0.80856 0.76998 0.78684 0.77358 0.83280 0.81804 0.83962 0.78836 0.84098 0.71834 0.78341 0.76621 0.75346 0.84413 0.600441 0.6149546 0.47509 0.82369 0.54017 0.771494 0.86626 0.82047 0.73171 0.81872 0.79284 1 0.79039 0.80093 -0.011510 6 0.74378 0.71566 0.0281144 0.66207 0.404410 insignificant 1 1 insignificant 0.70639 0.27139 insignificant 1 1 insignificant -0.0462850 0.11188 lowCoverage 1 lowCoverage 0.79039 0.62441 0.166879 6 0.74378 0.57074 0.173038 9.0143e-04 7.8430e-01 weaklyHypermeth 3.0048e-02 1.000000 weaklyHypermeth 6.5939e-02 0.827452 insignificant 1.0000e+00 1 insignificant 0.026561 5.0060e-01 lowCoverage 1.0000e+00 lowCoverage 0.79039 0.78881 -0.019691 6 0.74378 0.75821 -0.014438 8.7113e-01 0.37504 insignificant 1.0000e+00 1 insignificant 9.6849e-01 0.36216 insignificant 1.0000e+00 1 insignificant -0.060305 1.7841e-01 lowCoverage 1.0000e+00 lowCoverage 0.80093 0.62441 0.176716 6 0.71566 0.57074 0.144924 7.6664e-04 0.78077911 weaklyHypermeth 2.5555e-02 1.00000 weaklyHypermeth 1.6429e-02 0.799072 weaklyHypermeth 5.6653e-01 1 insignificant 0.072846 7.4395e-02 lowCoverage 1.00000000 lowCoverage 0.80093 0.78881 -0.0084416 6 0.71566 0.75821 -0.0425520 6.2723e-01 0.177358 insignificant 1.0000e+00 1 insignificant 8.0619e-01 0.234650 insignificant 1.0000e+00 1 insignificant -0.014020 7.2813e-01 insignificant 1.000000 insignificant 0.62441 0.78881 -0.1866101 6 0.57074 0.75821 -0.1874759 0.866592 1.1953e-01 insignificant 1 1.0000e+00 insignificant 0.96014 0.09418212 insignificant 1 1.00000 insignificant -0.08686614 0.094520 lowCoverage 1.00000 lowCoverage chr18 55834846 55835846 148809 ENSG00000214346 0.95063 274 8 0.86843 59 8 0.44615 89 8 0.94287 248 8 0.81875 34 2 0.95544 256 8 0.84226 48 8 0.93696 129 8 0.96122 93 8 0.95759 82 8 0.93585 219 8 0.85417 33 3 0.96071 195 8 0.99038 58 3 0.98648 144 8 1.00000 11 0 0.91250 36 5 0.97231 297 8 0.95218 76 8 0.93359 139 8 0.88889 7 0 0.86079 105 8 0.98092 65 3 0.89432 37 3 0.99107 67 8 0.90395 166 8 0.87857 72 5 0.964286 23 3 0.93570 114 8 0.90389 168 8 0.96226 235 8 0.92181 312 8 0.91438 151 8 0.993750 75 3 1.00000 20 0 0.937500 17 0 0.85856 61 8 0.98851 175 8 0.96451 180 8 0.94740 196 3 0.91176 175 8 0.96017 189 3 0.96129 196 8 0.92726 0.80819 0.50017 0.92678 0.78889 0.95091 0.73862 0.93754 0.95254 0.94405 0.94109 0.83704 0.94201 0.98291 0.98428 1.00000 0.87556 0.95231 0.93291 0.89676 0.92798 0.85500 0.96842 0.82545 0.98413 0.88034 0.82413 0.94921 0.91802 0.87720 0.96418 0.90365 0.887891 0.9888889 0.91228 0.88889 0.78694 0.984150 0.94224 0.94757 0.90066 0.93446 0.94845 0 0.91429 0.91320 0.007300 8 0.92279 0.92139 0.0014071 0.45700 0.690619 insignificant 1 1 insignificant 0.24972 0.78960 insignificant 1 1 insignificant -0.0149472 0.61662 insignificant 1 insignificant 0.91429 0.94790 -0.025478 8 0.92279 0.94893 -0.026138 9.6836e-01 2.7443e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9133e-01 0.069695 insignificant 1.0000e+00 1 insignificant -0.039860 2.7211e-01 lowCoverage 1.0000e+00 lowCoverage 0.91429 0.92201 -0.021480 8 0.92279 0.95086 -0.028064 9.8056e-01 0.27733 insignificant 1.0000e+00 1 insignificant 9.6545e-01 0.20150 insignificant 1.0000e+00 1 insignificant -0.040103 1.7354e-01 insignificant 1.0000e+00 insignificant 0.91320 0.94790 -0.027120 8 0.92139 0.94893 -0.027545 9.9183e-01 0.00139791 weaklyHypometh 1.0000e+00 0.46597 insignificant 9.8654e-01 0.016946 weaklyHypometh 1.0000e+00 1 insignificant -0.024913 3.6518e-01 lowCoverage 1.00000000 lowCoverage 0.91320 0.92201 -0.0359752 8 0.92139 0.95086 -0.0294711 9.9610e-01 0.036955 weaklyHypometh 1.0000e+00 1 insignificant 9.8821e-01 0.085108 insignificant 1.0000e+00 1 insignificant -0.025156 1.3137e-01 insignificant 1.000000 insignificant 0.94790 0.92201 -0.0050873 8 0.94893 0.95086 -0.0019260 0.717392 5.3847e-01 insignificant 1 1.0000e+00 insignificant 0.54568 0.86047944 insignificant 1 1.00000 insignificant -0.00024297 0.992484 lowCoverage 1.00000 lowCoverage chr18 58843233 58844233 148972 PHLPP1 ENSG00000081913 0.69758 263 5 0.59899 247 5 0.37857 37 5 0.52660 266 5 0.56727 43 5 0.55108 262 5 0.49559 57 5 0.56593 70 5 0.45238 33 5 0.58667 23 3 0.58129 218 5 0.60000 8 0 0.55556 36 5 0.52286 29 4 0.69524 22 2 0.60000 11 0 NA 0 0 0.45786 305 5 0.81169 144 3 0.60392 185 5 0.32000 12 1 0.80000 5 0 0.59406 116 5 0.31299 85 5 0.42990 135 5 0.67749 264 5 0.47619 35 5 0.066667 13 2 0.61238 116 5 0.68267 333 5 0.66936 348 5 0.69739 211 5 0.45789 192 5 0.414286 126 5 1.00000 87 2 0.500000 2 0 0.46023 142 5 0.42576 285 5 0.75018 290 5 0.63319 209 5 0.45966 229 5 0.87031 124 3 0.49746 241 5 0.69758 0.59899 0.37857 0.52660 0.56727 0.55108 0.49559 0.56593 0.45238 0.58667 0.58129 0.60000 0.55556 0.52286 0.69524 0.60000 NA 0.45786 0.81169 0.60392 0.32000 0.80000 0.59406 0.31299 0.42990 0.67749 0.47619 0.30827 0.61238 0.61920 0.66936 0.69739 0.457886 0.4142857 0.58393 0.38393 0.46023 0.425763 0.75018 0.63319 0.45966 0.67094 0.49746 0 0.64011 0.65849 -0.040196 5 0.57872 0.60701 -0.0282904 0.90186 0.034017 weaklyHypometh 1 1 insignificant 0.73393 0.53422 insignificant 1 1 insignificant 0.0427448 0.52229 lowCoverage 1 lowCoverage 0.64011 0.45923 0.231093 5 0.57872 0.48481 0.093903 5.3841e-14 4.8513e-05 hypermethylated 4.4868e-12 0.048513 hypermethylated 3.9086e-04 0.038214 hypermethylated 2.2992e-02 1 hypermethylated 0.027976 7.7865e-01 lowCoverage 1.0000e+00 lowCoverage 0.64011 0.67704 -0.027701 5 0.57872 0.60195 -0.023235 8.3962e-01 0.23621 insignificant 1.0000e+00 1 insignificant 8.9502e-01 0.30010 insignificant 1.0000e+00 1 insignificant -0.071156 4.1684e-01 lowCoverage 1.0000e+00 lowCoverage 0.65849 0.45923 0.211463 5 0.60701 0.48481 0.122194 1.2230e-10 0.00093063 hypermethylated 8.7360e-09 0.46532 hypermethylated 1.7805e-02 0.126241 weaklyHypermeth 5.8420e-01 1 insignificant -0.014769 8.9664e-01 lowCoverage 1.00000000 lowCoverage 0.65849 0.67704 0.0105725 5 0.60701 0.60195 0.0050558 2.3928e-01 0.559305 insignificant 1.0000e+00 1 insignificant 7.9979e-01 0.287797 insignificant 1.0000e+00 1 insignificant -0.113901 2.7513e-01 lowCoverage 1.000000 lowCoverage 0.45923 0.67704 -0.1774296 5 0.48481 0.60195 -0.1171377 0.065330 3.0718e-05 weaklyHypometh 1 2.0478e-03 weaklyHypometh 0.22619 0.00319368 weaklyHypometh 1 0.22812 insignificant -0.09913278 0.430288 lowCoverage 1.00000 lowCoverage chr18 70971681 70972681 149430 ZNF407 ENSG00000215421 0.875388 605 11 0.807283 370 11 0.73938 263 11 0.880545 547 10 0.772597 147 9 0.87341 540 11 0.87064 293 10 0.85505 384 11 0.8390415 381 10 0.90616 376 10 0.904265 452 11 0.828979 158 10 0.7885226 509 11 0.90299 196 6 0.8154712 405 10 0.791664 145 8 0.859575 120 10 0.79254 707 11 0.870076 316 11 0.878955 464 11 0.81480 117 9 0.784926 264 10 0.87576 378 11 0.771982 201 11 0.932236 157 10 0.897315 468 11 0.766491 230 11 0.757948 171 9 0.87951 347 11 0.8849891 520 11 0.820021 382 11 0.922676 589 11 0.0570984 568 11 0.091271 312 11 0.0000000 175 4 0.2096821 81 6 0.115420 308 11 0.5401190 476 11 0.776560 674 11 0.852108 468 11 0.834552 519 10 0.788308 544 11 0.87226 568 11 0.87881 0.819154 0.771524 0.869952 0.828652 0.883980 0.861462 0.8807863 0.859069 0.882243 0.915654 0.834402 0.7920418 0.881775 0.8440916 0.779950 0.823396 0.843187 0.8837934 0.878744 0.858402 0.8040461 0.871924 0.867446 0.9395341 0.908304 0.790331 0.853077 0.879975 0.879890 0.86279 0.926863 0.063345 0.1295033 0.2030890 0.2627426 0.175183 0.5764559 0.826214 0.843834 0.8201268 0.770600 0.862646 8 0.858769 0.875262 -1.8764e-02 11 0.82323 0.83843 -0.0152000 9.6102e-01 0.06012404 insignificant 1.0000000 1.00000 insignificant 9.7479e-01 0.15042337 insignificant 1.0000000 1.00000 insignificant 0.00023898 0.9911421 insignificant 1 insignificant 0.858769 0.2226277 0.61979781 11 0.82323 0.194657 0.6285688 4.0463e-92 1.0000e+00 hypermethylated 2.0231e-89 1.0000000 hypermethylated 1.7567e-26 1.00000000 hypermethylated 1.7567e-23 1.00000 hypermethylated 0.6736950 3.2736e-04 hypermethylated 1.8585e-02 hypermethylated 0.858769 0.830869 0.03450296 11 0.82323 0.83277 -0.0095411 4.6798e-02 0.99650216 weaklyHypermeth 8.8299e-01 1.000000 insignificant 2.1729e-01 0.95506621 insignificant 1.0000e+00 1.00000 insignificant 0.0178698 4.2892e-01 insignificant 1.000000 insignificant 0.875262 0.2226277 0.63816841 11 0.83843 0.194657 0.6437688 1.0988e-61 1.0000e+00 hypermethylated 5.4940e-59 1.0000e+00 hypermethylated 3.0382e-22 1.0000e+00 hypermethylated 2.3671e-19 1.0000e+00 hypermethylated 0.67345604 2.5670e-04 hypermethylated 1.6043e-02 hypermethylated 0.875262 0.830869 0.05329984 11 0.83843 0.83277 0.0056589 9.2496e-04 0.993223 weaklyHypermeth 3.4258e-02 1 weaklyHypermeth 1.3125e-02 0.953078 weaklyHypermeth 5.9660e-01 1 insignificant 0.01763078 5.0992e-01 insignificant 1.000000 insignificant 0.2226277 0.830869 -0.5824499 11 0.194657 0.83277 -0.638110 1.0000e+00 1.8064e-27 hypomethylated 1.0000e+00 3.6128e-25 hypomethylated 1.0000e+00 2.3623e-14 hypomethylated 1.0000e+00 1.1811e-11 hypomethylated -0.65582526 2.9698e-04 hypomethylated 0.01575752 hypomethylated chr18 71181084 71182084 149458 TSHZ1 ENSG00000179981 0.949636 342 11 0.907990 303 7 0.79437 219 9 0.880233 267 9 0.844891 187 9 0.94542 377 9 0.78849 194 9 0.91214 238 11 0.7661310 182 9 0.91411 267 7 0.836600 307 11 0.894383 88 7 0.7780531 220 7 0.95785 117 9 0.7550402 283 9 0.798810 86 7 0.777778 5 0 0.93846 259 9 0.928434 236 7 0.862526 287 9 0.84583 49 6 0.988562 122 7 0.95973 133 9 0.786882 103 8 0.865171 78 7 0.957589 293 11 0.873485 243 9 0.730769 93 8 0.75202 135 7 0.7844697 367 11 0.966175 277 9 0.956016 360 9 0.7992167 194 8 0.931521 111 9 0.7233202 252 8 0.9081633 35 3 0.707823 133 9 0.7815909 262 9 0.878324 394 11 0.887988 386 11 0.966033 335 9 0.974078 235 7 0.89173 325 11 0.94829 0.918595 0.885496 0.968918 0.950039 0.928279 0.879160 0.9358682 0.835140 0.936332 0.950805 0.917919 0.8913597 0.941452 0.9374466 0.932305 0.875904 0.970899 0.9494446 0.940859 0.797318 0.9886059 0.950942 0.895587 0.9554802 0.939737 0.950310 0.887612 0.943326 0.931968 0.96058 0.970115 0.881136 0.9413643 0.8449484 0.9281297 0.882899 0.9108063 0.963734 0.959433 0.9820250 0.973082 0.882229 7 0.926075 0.937861 -1.5618e-02 9 0.79618 0.82461 -0.0284333 9.8305e-01 0.06224669 insignificant 1.0000000 1.00000 insignificant 9.9876e-01 0.00989620 weaklyHypometh 1.0000000 1.00000 insignificant -0.01065811 0.7346554 insignificant 1 insignificant 0.927048 0.9250253 -0.00063327 9 0.82324 0.767721 0.0555157 1.5185e-02 4.7598e-02 weaklyHypometh 1.2869e-01 1.0000000 insignificant 9.7756e-02 0.12241649 insignificant 8.5521e-01 1.00000 insignificant 0.0529610 2.3933e-01 insignificant 1.0000e+00 insignificant 0.926075 0.942687 -0.02060327 9 0.79618 0.81500 -0.0188233 9.9383e-01 0.07191943 insignificant 1.0000e+00 1.000000 insignificant 9.9815e-01 0.17114802 insignificant 1.0000e+00 1.00000 insignificant -0.0580650 5.1488e-02 insignificant 1.000000 insignificant 0.938612 0.9250253 0.01692478 9 0.84189 0.767721 0.0741703 2.4239e-03 7.8674e-01 weaklyHypermeth 2.6636e-02 1.0000e+00 weaklyHypermeth 1.6531e-02 8.9632e-01 weaklyHypermeth 1.9449e-01 1.0000e+00 insignificant 0.06361908 2.0064e-01 insignificant 1.0000e+00 insignificant 0.937861 0.942687 -0.00597691 9 0.82461 0.81500 0.0096100 8.7855e-01 0.663457 insignificant 1.0000e+00 1 insignificant 6.9875e-01 0.876178 insignificant 1.0000e+00 1 insignificant -0.04740689 1.8298e-01 insignificant 1.000000 insignificant 0.9250253 0.943250 -0.0187911 11 0.767721 0.87770 -0.109975 8.7369e-01 1.0772e-01 insignificant 1.0000e+00 9.5327e-01 insignificant 9.6193e-01 7.9778e-02 insignificant 1.0000e+00 9.2224e-01 insignificant -0.11102598 3.4827e-02 weaklyHypometh 0.55975638 insignificant chr18 71486409 71487409 149504 C18orf62 ENSG00000206026 0.971494 185 5 0.916138 88 5 0.78627 52 3 0.967653 128 3 1.000000 15 1 0.93318 144 5 0.76667 30 3 0.90081 107 5 0.8003175 44 5 0.97222 30 4 0.929870 130 5 1.000000 10 0 0.9666667 127 5 NA 0 0 0.9257143 50 5 1.000000 10 1 0.864286 24 2 0.91512 208 5 0.864615 62 4 0.940035 193 5 0.77333 33 2 0.941689 104 5 0.93247 92 5 0.848485 47 5 0.773218 77 5 0.938313 151 5 0.760860 69 5 0.636003 28 3 0.90833 91 5 0.9001147 140 5 0.955856 124 5 0.940249 207 5 0.9051515 62 5 0.638292 78 5 0.3931624 139 3 0.8833333 28 2 0.864615 55 5 0.9814671 175 5 0.863840 184 5 0.977149 230 5 0.944340 211 5 0.979635 146 5 0.93162 238 5 0.95343 0.934609 0.728777 0.941991 1.000000 0.890472 0.760784 0.8592401 0.707862 0.998039 0.887777 0.998940 0.9431373 NA 0.9292437 0.998940 0.813445 0.875736 0.8354751 0.946255 0.931765 0.9205764 0.896646 0.856061 0.9111735 0.923470 0.922391 0.865501 0.852451 0.859471 0.92878 0.917674 0.895401 0.5949561 0.4618341 0.8689542 0.891697 0.9702689 0.936680 0.967462 0.9503277 0.960902 0.911838 2 0.916870 0.926053 -4.7606e-03 5 0.93515 0.77417 0.1609799 7.7378e-01 0.67694584 insignificant 1.0000000 1.00000 insignificant 1.1202e-01 0.98117896 insignificant 1.0000000 1.00000 insignificant 0.05782109 0.1016675 lowCoverage 1 lowCoverage 0.916820 0.7988827 0.12760668 5 0.92218 0.782717 0.1394657 4.4278e-04 8.9224e-01 weaklyHypermeth 4.6401e-03 1.0000000 weaklyHypermeth 8.2681e-02 0.99227966 insignificant 7.5164e-01 1.00000 insignificant 0.1392275 1.8547e-01 lowCoverage 1.0000e+00 lowCoverage 0.916820 0.946482 -0.03032564 5 0.92218 0.94966 -0.0274793 8.5689e-01 0.11707399 insignificant 1.0000e+00 1.000000 insignificant 5.5971e-01 0.37785050 insignificant 1.0000e+00 1.00000 insignificant -0.0224195 4.2083e-01 lowCoverage 1.000000 lowCoverage 0.928448 0.7988827 0.12715826 5 0.92901 0.782717 0.1462898 4.3489e-03 8.9394e-01 weaklyHypermeth 4.5301e-02 1.0000e+00 weaklyHypermeth 3.0171e-01 8.9510e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08140644 4.2291e-01 lowCoverage 1.0000e+00 lowCoverage 0.928448 0.946482 -0.02057617 5 0.92901 0.94966 -0.0206552 8.8537e-01 0.055518 insignificant 1.0000e+00 1 insignificant 9.3703e-01 0.056515 insignificant 1.0000e+00 1 insignificant -0.08024062 4.2030e-02 lowCoverage 1.000000 lowCoverage 0.7988827 0.946482 -0.1495957 5 0.782717 0.94966 -0.166945 8.9930e-01 5.2880e-02 insignificant 1.0000e+00 5.1843e-01 insignificant 9.3040e-01 7.5180e-02 insignificant 1.0000e+00 9.1675e-01 insignificant -0.16164706 1.3547e-01 lowCoverage 1.00000000 lowCoverage chr18 71699108 71700108 149527 C18orf62 ENSG00000206026 0.854852 512 14 0.712768 332 14 0.74560 197 14 0.866213 198 11 0.723810 107 7 0.80652 426 14 0.75133 173 12 0.80740 233 13 0.7355726 105 10 0.79758 146 14 0.762363 447 14 0.698810 86 7 0.7915447 315 14 0.83333 6 0 0.8678896 196 14 0.802579 76 8 0.759714 93 7 0.85212 231 13 0.831784 333 14 0.839846 395 14 0.82367 96 8 0.872781 73 8 0.83380 260 14 0.921943 98 8 0.862821 68 5 0.785448 459 14 0.807174 156 10 0.786905 58 4 0.81143 273 13 0.7983446 450 14 0.771492 427 14 0.812422 494 14 0.7099280 254 12 0.713039 278 14 0.7401823 313 14 0.7892465 98 8 0.669771 89 8 0.7440173 490 14 0.873790 277 12 0.818323 389 14 0.779237 250 12 0.842447 300 12 0.84974 319 12 0.86445 0.738637 0.782870 0.862177 0.778101 0.790083 0.794495 0.7962342 0.743816 0.829935 0.797245 0.771440 0.8305307 NA 0.8650633 0.765102 0.787690 0.862355 0.8512608 0.836380 0.803123 0.8647557 0.837212 0.904702 0.8599470 0.796313 0.781542 0.820982 0.836069 0.824329 0.79403 0.813444 0.735801 0.6637486 0.7513213 0.7849704 0.680149 0.7806729 0.904941 0.847171 0.8210637 0.846725 0.859310 4 0.815715 0.858173 -8.4112e-03 14 0.80668 0.81646 -0.0097816 9.5102e-01 0.27559200 insignificant 1.0000000 1.00000 insignificant 9.8015e-01 0.04696843 weaklyHypometh 1.0000000 1.00000 insignificant -0.03193811 0.0741197 insignificant 1 insignificant 0.815715 0.7838371 0.06300096 14 0.80668 0.749570 0.0571075 8.1275e-06 1.0000e+00 weaklyHypermeth 1.1288e-04 1.0000000 weaklyHypermeth 7.8732e-04 0.99983573 weaklyHypermeth 1.2699e-02 1.00000 weaklyHypermeth 0.0643835 8.9975e-03 weaklyHypermeth 1.7231e-01 insignificant 0.815715 0.800000 -0.02849504 14 0.80668 0.82654 -0.0198638 9.4397e-01 0.05343365 insignificant 1.0000e+00 1.000000 insignificant 9.9743e-01 0.05201538 insignificant 1.0000e+00 1.00000 insignificant -0.0406262 7.2060e-02 insignificant 1.000000 insignificant 0.858173 0.7838371 0.07457586 14 0.81646 0.749570 0.0668891 2.8897e-08 1.0000e+00 weaklyHypermeth 6.5676e-07 1.0000e+00 weaklyHypermeth 2.0093e-05 1.0000e+00 weaklyHypermeth 5.7408e-04 1.0000e+00 weaklyHypermeth 0.09632160 7.1750e-04 weaklyHypermeth 2.3917e-02 weaklyHypermeth 0.858173 0.800000 -0.02370479 14 0.81646 0.82654 -0.0100822 5.0420e-01 0.100861 insignificant 1.0000e+00 1 insignificant 9.5280e-01 0.177253 insignificant 1.0000e+00 1 insignificant -0.00868806 6.7850e-01 insignificant 1.000000 insignificant 0.7838371 0.800000 -0.0931549 14 0.749570 0.82654 -0.076971 9.9993e-01 2.6468e-05 weaklyHypometh 1.0000e+00 8.0205e-04 weaklyHypometh 1.0000e+00 1.4109e-04 weaklyHypometh 1.0000e+00 5.8787e-03 weaklyHypometh -0.10500966 1.3635e-03 weaklyHypometh 0.05076438 weaklyHypometh chr18 72600209 72601209 149562 ENSG00000220032 0.934524 32 2 0.820997 91 5 0.68333 17 2 0.920238 127 5 0.516667 10 1 0.90095 76 5 0.82667 18 2 0.86551 77 5 0.8000000 7 0 0.83333 26 3 0.924841 111 5 1.000000 2 0 0.7500000 20 2 0.95256 30 2 0.9083333 25 2 0.000000 4 0 NA 0 0 0.95003 82 4 0.962321 44 2 0.969002 123 3 0.92143 35 3 1.000000 3 0 0.86627 73 5 0.628252 45 5 0.750000 18 2 0.926471 61 4 0.760767 57 4 0.833333 10 0 0.93010 97 3 0.8260750 122 5 0.666667 6 0 0.922222 32 3 0.8857143 91 3 0.851373 42 3 0.8606061 122 3 0.5000000 2 0 0.840260 66 5 0.7579365 14 1 0.775000 35 1 0.782098 200 5 0.962500 75 5 0.773016 45 3 0.92062 169 5 0.90816 0.738776 0.828571 0.934184 0.678571 0.883673 0.852381 0.8184127 0.571429 1.000000 0.939286 0.982443 0.5714286 0.798538 0.7440476 0.125300 NA 0.923636 0.9668958 0.990476 0.964286 0.9883298 0.791100 0.303297 0.3928571 0.983193 0.974790 1.000000 0.985348 0.575624 0.97616 0.928571 0.928571 0.9761905 0.8865492 0.8387755 0.764378 0.8146259 0.910714 0.946363 0.8660714 0.356009 0.910502 0 0.894680 0.876565 1.8158e-02 4 0.78048 0.70992 0.0705641 6.4383e-01 0.78095380 lowCoverage 1.0000000 1.00000 lowCoverage 8.7899e-01 0.52647291 lowCoverage 1.0000000 1.00000 lowCoverage -0.01915920 0.7603315 lowCoverage 1 lowCoverage 0.894565 0.8605341 0.02358169 3 0.74390 0.805292 -0.0613937 1.9064e-01 8.7667e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 5.0179e-01 0.63493333 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0341578 6.7319e-01 lowCoverage 1.0000e+00 lowCoverage 0.894565 0.913793 -0.02877077 5 0.74390 0.90027 -0.1563708 9.5804e-01 0.06360953 insignificant 1.0000e+00 1.000000 insignificant 8.2384e-01 0.11535249 insignificant 1.0000e+00 1.00000 insignificant -0.0258410 7.0314e-01 lowCoverage 1.000000 lowCoverage 0.879713 0.8605341 0.01428223 3 0.82824 0.805292 0.0229482 4.5813e-01 6.4460e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0307e-01 9.6125e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05331702 4.5396e-01 lowCoverage 1.0000e+00 lowCoverage 0.879713 0.913793 -0.04454019 4 0.82824 0.90027 -0.0720289 9.4879e-01 0.108254 lowCoverage 1.0000e+00 1 lowCoverage 5.6012e-01 0.339974 lowCoverage 1.0000e+00 1 lowCoverage -0.00668182 9.0167e-01 lowCoverage 1.000000 lowCoverage 0.8605341 0.913793 -0.0406989 3 0.805292 0.90027 -0.094977 8.7350e-01 7.4316e-02 lowCoverage 1.0000e+00 6.9454e-01 lowCoverage 7.8471e-01 1.5719e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05999884 4.2751e-01 lowCoverage 1.00000000 lowCoverage chr18 73663554 73664554 149573 ENSG00000199392 0.700056 158 7 0.626010 114 6 0.61815 77 5 0.725839 155 5 0.509259 19 0 0.83453 259 7 0.65985 37 3 0.54879 80 5 0.4883333 65 3 0.76926 89 3 0.827744 163 7 0.704586 41 3 0.6956744 177 7 0.57451 44 3 0.7348006 104 5 0.169048 22 3 0.529167 17 1 0.62887 167 6 0.765178 91 7 0.799593 140 7 0.57328 54 5 0.356360 200 8 0.48926 81 6 0.568365 76 6 0.700814 71 7 0.833252 128 7 0.605996 135 9 0.475079 45 6 0.68388 89 7 0.8050188 169 7 0.471911 129 7 0.659442 210 7 0.3599734 133 7 0.287823 130 7 0.5000000 60 5 0.4190476 41 5 0.392672 135 8 0.3521447 176 7 0.300120 190 7 0.553391 127 7 0.628375 138 6 0.404217 115 5 0.54409 191 7 0.78908 0.710363 0.601389 0.837740 0.793896 0.769708 0.793442 0.6574796 0.612821 0.886946 0.901692 0.769353 0.6628021 0.771172 0.7334511 0.175926 0.573815 0.623447 0.8093542 0.770209 0.588864 0.2659740 0.621870 0.709467 0.7163314 0.843100 0.727981 0.441553 0.776790 0.894101 0.67350 0.828884 0.358134 0.2910984 0.0830087 0.2917949 0.419464 0.1613810 0.280999 0.539957 0.5833417 0.386185 0.588586 3 0.739475 0.673396 4.4970e-02 7 0.66610 0.56935 0.0967509 5.1862e-02 0.99867795 insignificant 1.0000000 1.00000 insignificant 2.0395e-01 0.75325125 insignificant 1.0000000 1.00000 insignificant 0.04357393 0.4228375 lowCoverage 1 lowCoverage 0.739475 0.3318519 0.42499368 7 0.66610 0.327855 0.3382460 1.7020e-22 9.9891e-01 hypermethylated 7.3998e-21 1.0000000 hypermethylated 4.9931e-09 0.99967924 hypermethylated 2.0805e-07 1.00000 hypermethylated 0.2601854 1.4845e-05 lowCoverage 1.1419e-03 lowCoverage 0.739475 0.487516 0.25667302 7 0.66610 0.49887 0.1672358 2.8923e-12 0.98280143 hypermethylated 4.1318e-10 1.000000 hypermethylated 1.7130e-06 0.99761444 hypermethylated 2.1413e-04 1.00000 hypermethylated 0.1594244 5.1933e-02 lowCoverage 1.000000 lowCoverage 0.673396 0.3318519 0.36477181 7 0.56935 0.327855 0.2414951 1.2473e-10 9.9984e-01 hypermethylated 3.4647e-09 1.0000e+00 hypermethylated 5.6210e-06 9.9993e-01 hypermethylated 1.8132e-04 1.0000e+00 hypermethylated 0.21661145 5.5479e-04 hypermethylated 2.1964e-02 hypermethylated 0.673396 0.487516 0.20966242 7 0.56935 0.49887 0.0704848 5.8973e-04 0.758174 hypermethylated 2.3589e-02 1 hypermethylated 2.2113e-04 0.957877 hypermethylated 2.0375e-02 1 hypermethylated 0.11585049 1.4475e-01 insignificant 1.000000 insignificant 0.3318519 0.487516 -0.1534826 7 0.327855 0.49887 -0.171010 6.8945e-01 2.3784e-03 weaklyHypometh 1.0000e+00 3.6590e-02 weaklyHypometh 7.1423e-01 2.1135e-02 weaklyHypometh 1.0000e+00 3.2515e-01 insignificant -0.10076096 1.7699e-01 insignificant 1.00000000 insignificant chr18 73932380 73933380 149605 ENSG00000199728 0.976426 199 5 0.983092 360 8 0.85496 75 8 0.941856 118 8 0.947368 19 1 0.97202 220 5 0.66923 34 1 0.92851 145 5 0.8862745 53 5 0.94011 61 5 0.954447 223 5 0.900000 6 1 0.9657862 172 5 0.96923 79 5 0.9643965 95 5 1.000000 2 0 1.000000 5 0 0.94317 179 5 0.982331 192 5 0.948093 153 8 0.96667 30 2 1.000000 29 5 0.87470 110 8 1.000000 98 5 0.892857 32 4 0.968484 359 8 0.943137 102 5 1.000000 21 1 0.97405 234 5 0.9792571 523 8 0.909669 419 8 0.931059 110 5 0.7779528 210 8 0.605882 57 5 0.9205044 281 8 0.8750000 8 0 0.815175 90 5 0.8491929 298 8 0.879316 126 5 0.909508 73 5 0.831624 128 5 0.990466 139 2 0.93612 134 5 0.95695 0.946017 0.820755 0.963408 NA 0.960198 0.746009 0.9227549 0.833518 0.915044 0.946397 NA 0.9642577 0.982583 0.9697549 NA 0.952946 0.906922 0.9671585 0.976546 1.000000 1.0000000 0.863095 1.000000 0.8308625 0.962024 0.895486 0.993515 0.960515 0.974615 0.92637 0.895225 0.715399 0.5726970 0.9940417 0.7725263 0.772982 0.7070026 0.806321 0.939462 0.9046928 0.958267 0.889367 1 0.947699 0.952081 -3.3907e-03 5 0.96138 0.89232 0.0690582 9.3505e-01 0.85109453 insignificant 1.0000000 1.00000 insignificant 8.8854e-01 0.83110977 insignificant 1.0000000 1.00000 insignificant -0.01695882 0.4139867 lowCoverage 1 lowCoverage 0.947655 0.8315678 0.13223786 5 0.95172 0.840094 0.1116272 3.5523e-07 9.9991e-01 weaklyHypermeth 5.6385e-06 1.0000000 weaklyHypermeth 1.6359e-04 0.99998532 weaklyHypermeth 3.2077e-03 1.00000 weaklyHypermeth 0.1290804 3.3582e-02 lowCoverage 4.6641e-01 lowCoverage 0.947655 0.892977 0.04304673 5 0.95172 0.92275 0.0289744 9.5168e-03 0.73129904 weaklyHypermeth 2.5044e-01 1.000000 insignificant 2.7781e-01 0.44784419 insignificant 1.0000e+00 1.00000 insignificant 0.0269584 4.1572e-01 lowCoverage 1.000000 lowCoverage 0.952890 0.8315678 0.12170641 8 0.95290 0.840094 0.1128046 1.2876e-06 9.9971e-01 weaklyHypermeth 2.3411e-05 1.0000e+00 weaklyHypermeth 8.8569e-05 9.9999e-01 weaklyHypermeth 2.2710e-03 1.0000e+00 weaklyHypermeth 0.14603927 2.1351e-02 weaklyHypermeth 3.2848e-01 insignificant 0.952913 0.891486 0.04762236 5 0.95813 0.82022 0.1379127 3.4111e-02 0.312480 weaklyHypermeth 6.5599e-01 1 insignificant 3.5102e-01 0.415267 insignificant 1.0000e+00 1 insignificant 0.04391721 1.8777e-01 lowCoverage 1.000000 lowCoverage 0.8315678 0.892977 -0.1161591 5 0.840094 0.92275 -0.082653 9.8762e-01 1.1728e-04 weaklyHypometh 1.0000e+00 2.9506e-03 weaklyHypometh 9.9976e-01 1.0974e-03 weaklyHypometh 1.0000e+00 3.0484e-02 weaklyHypometh -0.10212206 8.6945e-02 lowCoverage 1.00000000 lowCoverage chr18 74574622 74575622 149652 ENSG00000201723 0.935974 284 6 0.848706 340 8 0.63749 119 6 0.958309 310 7 0.863420 66 5 0.78605 363 7 0.93973 76 5 0.86471 134 6 0.9000985 105 6 0.92391 76 5 0.896672 336 8 0.891667 35 3 0.9105445 146 6 0.71437 71 6 0.9200948 109 6 0.925926 16 1 0.893333 84 4 0.83968 285 6 0.823556 109 4 0.916658 314 7 0.87976 41 5 0.828352 86 5 0.94955 98 5 0.826316 106 7 0.934812 112 6 0.948171 323 7 0.815588 90 7 0.669283 49 4 0.86791 181 6 0.9784536 347 8 0.919603 347 7 0.920627 295 7 0.3899509 235 7 0.193452 126 7 0.2393443 221 3 0.5847578 66 6 0.385660 233 7 0.6862462 360 8 0.850959 266 7 0.923408 314 7 0.899104 320 7 0.970355 183 6 0.65120 330 8 0.91801 0.866214 0.708100 0.938856 0.840123 0.893866 0.928561 0.9194267 0.905862 0.934981 0.894127 0.862617 0.8823084 0.956962 0.9242462 0.881103 0.913263 0.887271 0.8716421 0.914462 0.754517 0.7942346 0.902802 0.879639 0.8975442 0.941382 0.862778 0.832854 0.814039 0.975777 0.95026 0.928122 0.389958 0.1548064 0.1531879 0.5554341 0.427819 0.5890723 0.862007 0.934262 0.8707665 0.945091 0.712578 4 0.895500 0.921777 -2.4718e-02 6 0.88200 0.91392 -0.0319220 9.4780e-01 0.03715277 weaklyHypometh 1.0000000 1.00000 insignificant 7.5897e-01 0.20637839 insignificant 1.0000000 1.00000 insignificant -0.00865647 0.7781544 insignificant 1 insignificant 0.895500 0.3988719 0.50548721 6 0.88200 0.465314 0.4166878 1.9825e-35 1.0000e+00 hypermethylated 1.6521e-33 1.0000000 hypermethylated 6.0517e-13 0.99999999 hypermethylated 4.6551e-11 1.00000 hypermethylated 0.4563106 1.6858e-03 weaklyHypermeth 4.6829e-02 weaklyHypermeth 0.895500 0.856334 0.04378882 6 0.88200 0.82454 0.0574589 2.5048e-02 0.96473496 weaklyHypermeth 5.3294e-01 1.000000 insignificant 1.3175e-01 0.94368028 insignificant 1.0000e+00 1.00000 insignificant 0.0105413 8.6360e-01 insignificant 1.000000 insignificant 0.921777 0.3988719 0.50530756 7 0.91392 0.465314 0.4486097 6.5102e-27 1.0000e+00 hypermethylated 5.0079e-25 1.0000e+00 hypermethylated 3.8644e-13 1.0000e+00 hypermethylated 2.9726e-11 1.0000e+00 hypermethylated 0.46496711 1.2929e-03 weaklyHypermeth 3.6940e-02 weaklyHypermeth 0.921777 0.856334 0.06957971 7 0.91392 0.82454 0.0893809 3.0531e-04 0.994191 weaklyHypermeth 1.4539e-02 1 weaklyHypermeth 7.6695e-02 0.978465 insignificant 1.0000e+00 1 insignificant 0.01919773 7.6281e-01 insignificant 1.000000 insignificant 0.3988719 0.856334 -0.4687487 7 0.465314 0.82454 -0.359229 1.0000e+00 6.3758e-10 hypomethylated 1.0000e+00 4.5542e-08 hypomethylated 1.0000e+00 6.9654e-07 hypomethylated 1.0000e+00 5.3580e-05 hypomethylated -0.44576938 1.3706e-03 weaklyHypometh 0.05076438 weaklyHypometh chr18 74728426 74729426 149660 ENSG00000201723 0.913944 380 10 0.867104 334 10 0.80352 298 11 0.982429 396 8 0.878566 154 11 0.93321 411 11 0.87977 186 10 0.85195 388 11 0.8542185 309 11 0.88956 362 10 0.910401 309 11 0.719979 117 8 0.9558907 413 10 0.88485 231 8 0.9547603 373 10 0.959259 107 8 0.649621 70 7 0.84473 516 10 0.916160 282 10 0.926914 392 11 0.82766 98 8 0.733679 170 8 0.91884 332 10 0.910000 102 9 0.813123 146 8 0.845583 364 11 0.852996 224 11 0.800824 145 9 0.84961 378 10 0.8727249 469 11 0.886836 374 11 0.968016 393 11 0.4502357 338 11 0.392369 292 9 0.1619289 456 8 0.5928571 62 6 0.434148 246 11 0.4812723 440 10 0.913765 405 10 0.812707 385 10 0.903642 319 8 0.781946 284 10 0.89286 306 10 0.93296 0.884246 0.817093 0.980141 0.920367 0.927341 0.893079 0.8926167 0.894752 0.954419 0.918155 0.845342 0.9498120 0.880825 0.9371843 0.881329 0.801501 0.885734 0.9458342 0.929818 0.853969 0.8080686 0.925666 0.976697 0.9373116 0.946442 0.905932 0.952203 0.875710 0.934340 0.89224 0.975389 0.482197 0.3149644 0.1828322 0.4282438 0.486387 0.4763276 0.953089 0.865849 0.8898703 0.780167 0.915502 6 0.908261 0.917684 -1.4488e-02 10 0.83600 0.78801 0.0479863 9.7340e-01 0.32607472 insignificant 1.0000000 1.00000 insignificant 9.0648e-01 0.30591406 insignificant 1.0000000 1.00000 insignificant 0.02218466 0.3880745 insignificant 1 insignificant 0.908261 0.3069793 0.57685577 10 0.83600 0.352202 0.4837937 1.0130e-70 1.0000e+00 hypermethylated 2.0259e-68 1.0000000 hypermethylated 1.3546e-17 0.99999898 hypermethylated 1.6932e-15 1.00000 hypermethylated 0.4600398 2.8586e-04 hypermethylated 1.7866e-02 hypermethylated 0.908548 0.896410 0.02583292 10 0.89709 0.85922 0.0378665 3.9753e-02 0.32022298 weaklyHypermeth 7.7947e-01 1.000000 insignificant 8.9407e-02 0.30521779 insignificant 1.0000e+00 1.00000 insignificant 0.0178567 5.9398e-01 insignificant 1.000000 insignificant 0.917684 0.3069793 0.60103595 11 0.78801 0.352202 0.4358074 4.6513e-52 1.0000e+00 hypermethylated 9.3026e-50 1.0000e+00 hypermethylated 2.5793e-14 1.0000e+00 hypermethylated 2.5793e-12 1.0000e+00 hypermethylated 0.43785510 3.8491e-04 hypermethylated 1.7524e-02 hypermethylated 0.920251 0.896410 0.04438173 10 0.91613 0.85922 0.0569130 5.8636e-03 0.366997 weaklyHypermeth 1.5431e-01 1 insignificant 2.7846e-02 0.537506 weaklyHypermeth 7.7349e-01 1 insignificant -0.00432794 8.9585e-01 insignificant 1.000000 insignificant 0.3079869 0.896410 -0.5348403 10 0.416238 0.85922 -0.442981 1.0000e+00 1.0298e-23 hypomethylated 1.0000e+00 1.7163e-21 hypomethylated 1.0000e+00 2.2822e-11 hypomethylated 1.0000e+00 5.4968e-09 hypomethylated -0.44218303 2.4382e-04 hypomethylated 0.01575752 hypomethylated chr18 74769485 74770485 149666 ENSG00000201723 0.800000 107 6 0.602612 90 1 0.71350 30 2 0.744718 89 1 0.759375 42 7 0.89123 109 6 0.87143 15 1 0.85692 177 9 0.8602941 41 2 0.81116 76 6 0.905147 160 9 0.645833 14 0 0.9385008 176 9 0.93827 57 6 0.9190476 54 1 0.000000 5 0 0.200000 10 0 0.87823 142 6 0.783226 117 2 0.839081 109 6 0.60644 48 5 0.696605 72 6 0.91667 29 2 0.672190 54 6 0.791667 26 1 0.981087 96 6 0.742361 99 7 0.428571 19 1 0.79321 61 1 0.8404762 130 7 0.913919 81 6 0.845714 81 6 0.5954185 92 7 0.104000 29 1 0.1428571 25 1 0.5000000 4 0 0.496208 112 6 0.9070081 82 6 0.968750 32 1 0.854875 89 6 0.384375 68 1 0.595960 35 1 0.83333 41 1 0.88249 0.781616 0.849876 0.979555 0.907258 0.902859 0.919355 0.9291171 0.943074 0.947389 0.919062 0.596774 0.9358860 0.928315 0.9677419 0.438035 0.546053 0.843318 0.9526648 0.949088 0.836266 0.7746416 0.919355 0.734515 0.9112903 0.971784 0.863868 0.645161 0.786738 0.941628 0.88989 0.961290 0.744240 0.4379756 0.4875015 NA 0.582065 0.9269629 NA 0.992320 0.7310148 0.666178 0.967742 0 0.880864 0.847990 4.0112e-02 6 0.84575 0.75922 0.0865327 3.0408e-02 0.96819971 weaklyHypermeth 1.0000000 1.00000 insignificant 6.0719e-01 0.69928368 insignificant 1.0000000 1.00000 insignificant -0.02114641 0.7641806 lowCoverage 1 lowCoverage 0.876923 0.6540698 0.22477068 6 0.82855 0.552520 0.2760307 1.5676e-10 1.0000e+00 hypermethylated 3.2659e-09 1.0000000 hypermethylated 2.4049e-04 0.99999970 hypermethylated 4.4535e-03 1.00000 hypermethylated 0.2903472 6.6007e-02 lowCoverage 7.5084e-01 lowCoverage 0.876923 0.924528 -0.01338827 1 0.82855 0.68567 0.1428763 4.6706e-02 0.33696299 lowCoverage 8.8299e-01 1.000000 lowCoverage 5.7090e-01 0.31596708 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0204706 8.6788e-01 lowCoverage 1.000000 lowCoverage 0.847799 0.6540698 0.17793947 6 0.72912 0.552520 0.1765980 5.2721e-04 1.0000e+00 weaklyHypermeth 6.4293e-03 1.0000e+00 weaklyHypermeth 2.4972e-03 1.0000e+00 weaklyHypermeth 3.7483e-02 1.0000e+00 weaklyHypermeth 0.31149365 5.1342e-02 lowCoverage 6.4506e-01 lowCoverage 0.847799 0.924528 -0.04772954 1 0.72912 0.68567 0.0434436 6.4559e-01 0.483287 lowCoverage 1.0000e+00 1 lowCoverage 6.9701e-01 0.567202 lowCoverage 1.0000e+00 1 lowCoverage 0.04161699 7.2863e-01 lowCoverage 1.000000 lowCoverage 0.6540698 0.924528 -0.2079896 1 0.552520 0.68567 -0.133154 9.5615e-01 1.4137e-02 lowCoverage 1.0000e+00 1.6439e-01 lowCoverage 9.9044e-01 1.6235e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.26987666 1.2843e-01 lowCoverage 1.00000000 lowCoverage chr19 16920 17920 149690 NA 0.856691 99 6 0.781250 33 4 0.97727 42 4 0.902621 119 7 0.836364 26 4 0.95780 184 5 0.95809 77 4 0.85714 35 4 0.8750000 7 0 0.95833 18 1 0.948026 77 4 1.000000 24 3 0.9375000 15 0 0.66667 6 0 0.9166667 6 0 0.964286 28 4 NA 0 0 0.88857 56 4 1.000000 31 4 1.000000 39 5 1.00000 3 0 0.950000 11 1 0.87351 31 1 0.910000 16 1 0.450000 23 1 0.970000 79 5 0.892063 55 4 1.000000 5 1 0.83036 25 3 0.6253968 45 5 0.863636 55 4 0.933315 127 7 0.9375000 30 4 0.829060 67 4 0.8596032 92 4 0.6410256 67 3 0.775000 15 1 0.8312925 78 5 0.962374 175 7 0.963793 122 5 0.940000 91 4 0.920635 25 1 0.93646 88 7 0.87721 0.675000 0.981818 0.905336 0.778182 0.964456 0.942941 0.8571429 0.800000 0.933333 0.958421 1.000000 0.9500000 0.735036 0.8666667 0.971429 NA 0.793333 1.0000000 1.000000 0.930880 0.9200000 0.711905 0.870000 0.5200000 0.970000 0.869206 0.919232 0.814286 0.765714 0.98182 0.928308 0.900000 0.7709402 0.6478889 0.5495778 0.740000 0.7466667 0.975000 0.979310 0.9666667 0.800000 0.873333 0 0.912148 0.902128 3.2600e-03 4 0.90853 0.91347 -0.0049440 7.0013e-01 0.46719220 lowCoverage 1.0000000 1.00000 lowCoverage 3.0537e-01 0.76368513 lowCoverage 1.0000000 1.00000 lowCoverage 0.05140386 0.3290838 lowCoverage 1 lowCoverage 0.912148 0.8223496 0.07706851 5 0.90853 0.840912 0.0676150 3.1741e-03 7.4747e-01 weaklyHypermeth 2.8855e-02 1.0000000 weaklyHypermeth 6.7840e-02 0.93334200 insignificant 6.2815e-01 1.00000 insignificant 0.0973471 6.4711e-02 lowCoverage 7.5084e-01 lowCoverage 0.912148 0.937751 -0.02834712 5 0.90853 0.94466 -0.0361336 9.8229e-01 0.14466650 insignificant 1.0000e+00 1.000000 insignificant 7.7832e-01 0.73280069 insignificant 1.0000e+00 1.00000 insignificant -0.0350581 1.1121e-01 lowCoverage 1.000000 lowCoverage 0.902128 0.8223496 0.08843487 4 0.91347 0.840912 0.0725590 1.1515e-03 8.5696e-01 lowCoverage 1.3547e-02 1.0000e+00 lowCoverage 5.9187e-02 6.8715e-01 lowCoverage 5.8027e-01 1.0000e+00 lowCoverage 0.04594320 4.7087e-01 lowCoverage 1.0000e+00 lowCoverage 0.902128 0.937751 -0.03545712 4 0.91347 0.94466 -0.0311896 5.5830e-01 0.225399 lowCoverage 1.0000e+00 1 lowCoverage 5.1669e-01 0.325278 lowCoverage 1.0000e+00 1 lowCoverage -0.08646196 9.6223e-02 lowCoverage 1.000000 lowCoverage 0.8223496 0.937751 -0.1029808 5 0.840912 0.94466 -0.103749 9.9972e-01 3.2238e-04 weaklyHypometh 1.0000e+00 6.7162e-03 weaklyHypometh 9.9877e-01 2.2799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.13240516 2.1451e-02 lowCoverage 0.40474511 lowCoverage chr19 1243787 1244787 149696 EFNA2 ENSG00000099617 0.883625 556 18 0.755157 496 17 0.74107 366 16 0.892133 632 18 0.883789 191 15 0.88563 658 18 0.91788 258 16 0.90525 459 15 0.8232953 273 12 0.77702 305 12 0.869716 616 16 0.826203 142 12 0.9449170 383 12 0.92667 85 6 0.8432006 243 15 0.793750 107 8 0.769981 55 5 0.74044 675 16 0.798306 567 18 0.929868 534 16 0.85780 212 16 0.820398 136 10 0.95200 408 15 0.800481 207 15 0.873175 389 14 0.944076 555 18 0.810140 251 15 0.780934 142 10 0.70216 573 16 0.8564655 563 18 0.802382 577 18 0.874261 673 18 0.7275785 389 16 0.713374 401 15 0.7023749 444 15 0.8303729 322 15 0.658576 354 16 0.8259636 569 18 0.874663 543 16 0.899327 527 16 0.914868 318 16 0.842572 772 16 0.88148 513 18 0.91698 0.857142 0.845796 0.947233 0.925476 0.933823 0.908889 0.9066589 0.921031 0.912341 0.905656 0.814175 0.9453629 0.947791 0.9528325 0.852610 0.847978 0.936334 0.8990108 0.950051 0.958082 0.9163785 0.924090 0.958929 0.9754067 0.937002 0.929394 0.881889 0.860767 0.948111 0.90393 0.939621 0.768237 0.8552394 0.7866518 0.8205421 0.819124 0.9374723 0.905555 0.934863 0.9259566 0.903178 0.950562 10 0.904016 0.916560 -1.5178e-02 16 0.77188 0.80224 -0.0303549 9.8953e-01 0.24979021 insignificant 1.0000000 1.00000 insignificant 9.9849e-01 0.06515023 insignificant 1.0000000 1.00000 insignificant 0.00587245 0.8167582 insignificant 1 insignificant 0.904241 0.8301735 0.06995151 16 0.79552 0.685895 0.1096293 2.6310e-08 9.9836e-01 weaklyHypermeth 4.6982e-07 1.0000000 weaklyHypermeth 5.6423e-04 0.99128254 weaklyHypermeth 9.7281e-03 1.00000 weaklyHypermeth 0.1023548 1.3106e-02 weaklyHypermeth 2.3404e-01 insignificant 0.904800 0.906472 -0.00447303 16 0.85938 0.87380 -0.0144170 8.1106e-01 0.21677533 insignificant 1.0000e+00 1.000000 insignificant 6.8778e-01 0.13394597 insignificant 1.0000e+00 1.00000 insignificant -0.0371862 7.1908e-02 insignificant 1.000000 insignificant 0.916507 0.8301735 0.07891732 16 0.78504 0.685895 0.0991454 1.7513e-08 9.9977e-01 weaklyHypermeth 4.0728e-07 1.0000e+00 weaklyHypermeth 6.7490e-05 9.9997e-01 weaklyHypermeth 1.8241e-03 1.0000e+00 weaklyHypermeth 0.09648233 1.9790e-02 weaklyHypermeth 3.1644e-01 insignificant 0.918954 0.906472 0.01232064 16 0.85634 0.87380 -0.0174577 3.3064e-01 0.626048 insignificant 1.0000e+00 1 insignificant 4.2826e-01 0.859808 insignificant 1.0000e+00 1 insignificant -0.04305862 8.6439e-02 insignificant 1.000000 insignificant 0.8320518 0.906437 -0.0769005 16 0.755446 0.86749 -0.112045 9.9921e-01 1.3541e-04 weaklyHypometh 1.0000e+00 3.3026e-03 weaklyHypometh 9.9880e-01 2.8332e-03 weaklyHypometh 1.0000e+00 6.7457e-02 weaklyHypometh -0.13954095 3.1097e-03 weaklyHypometh 0.09717701 weaklyHypometh chr19 1247898 1248898 149697 EFNA2 ENSG00000099617 0.940993 409 12 0.776511 329 11 0.55554 240 12 0.796854 516 12 0.802588 177 10 0.93592 567 13 0.74778 218 15 0.80429 277 16 0.7436873 336 16 0.78283 301 14 0.749597 400 15 0.753549 234 13 0.7690682 371 16 0.82064 187 12 0.7793425 286 16 0.635177 290 13 0.640718 160 10 0.71675 579 11 0.736306 499 15 0.946490 497 12 0.76113 170 16 0.824847 251 11 0.68992 389 11 0.685368 174 10 0.875057 278 10 0.713734 399 14 0.799207 258 12 0.551433 154 9 0.80292 387 16 0.9229874 437 12 0.788341 407 11 0.874149 549 13 0.8084798 338 13 0.703421 281 16 0.6127821 435 8 0.7006154 158 9 0.701996 274 14 0.7612041 428 11 0.871128 459 11 0.814835 425 12 0.936670 342 11 0.962016 436 11 0.85377 497 12 0.94309 0.894142 0.715740 0.927532 0.938938 0.950514 0.923395 0.9355068 0.881554 0.913725 0.909267 0.899194 0.9138765 0.943359 0.9504331 0.757464 0.899326 0.912414 0.9079994 0.941425 0.933058 0.8686315 0.916080 0.884582 0.8808293 0.950588 0.919870 0.908761 0.918272 0.916253 0.91486 0.908557 0.808657 0.6740212 0.8416908 0.8790207 0.812029 0.8890797 0.928456 0.895485 0.9330827 0.949023 0.933879 9 0.815613 0.898728 1.0960e-03 12 0.76181 0.65434 0.1074698 3.0501e-01 0.65107668 insignificant 1.0000000 1.00000 insignificant 1.9481e-01 0.99090210 insignificant 1.0000000 1.00000 insignificant -0.00235933 0.9492889 insignificant 1 insignificant 0.815743 0.8076320 0.07994789 12 0.75160 0.677335 0.0742627 3.0237e-08 5.3750e-01 weaklyHypermeth 5.2132e-07 1.0000000 weaklyHypermeth 8.5017e-03 0.96210495 weaklyHypermeth 9.8857e-02 1.00000 weaklyHypermeth 0.0569823 1.2568e-01 insignificant 1.0000e+00 insignificant 0.844146 0.931913 -0.01673410 11 0.77808 0.85609 -0.0780102 9.3259e-01 0.04369656 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.4920e-01 0.33128306 insignificant 1.0000e+00 1.00000 insignificant -0.1159516 7.5523e-03 weaklyHypometh 0.419572 insignificant 0.899922 0.8072100 0.08373021 12 0.65626 0.646547 0.0097079 7.3741e-05 8.1821e-01 weaklyHypermeth 1.0687e-03 1.0000e+00 weaklyHypermeth 1.9646e-01 9.2866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05934165 1.5901e-01 insignificant 1.0000e+00 insignificant 0.904088 0.931913 -0.01567936 11 0.72771 0.85609 -0.1283815 9.7876e-01 0.030936 weaklyHypometh 1.0000e+00 1 insignificant 9.9023e-01 0.136195 insignificant 1.0000e+00 1 insignificant -0.11359232 1.4330e-02 weaklyHypometh 0.716523 insignificant 0.8112513 0.931913 -0.1143304 11 0.690739 0.85609 -0.165353 9.9999e-01 2.1566e-03 weaklyHypometh 1.0000e+00 3.4088e-02 weaklyHypometh 1.0000e+00 2.4526e-02 weaklyHypometh 1.0000e+00 3.6067e-01 insignificant -0.17293397 1.4853e-03 weaklyHypometh 0.05304535 weaklyHypometh chr19 2441803 2442803 149699 GADD45B ENSG00000099860 0.825357 333 8 0.805359 236 8 0.85641 206 8 0.915687 457 8 0.868988 124 8 0.85767 400 8 0.75289 145 8 0.89846 182 8 0.7532415 319 8 0.81839 249 8 0.836782 242 8 0.858643 103 4 0.8900388 374 8 0.90608 167 8 0.8898345 244 8 0.878162 87 4 0.820706 92 8 0.75069 538 8 0.862977 124 8 0.793215 326 8 0.60113 74 4 0.847692 188 8 0.87124 242 8 0.721856 126 4 0.867877 163 8 0.922180 288 8 0.563453 160 7 0.773165 147 8 0.86805 193 8 0.8747612 265 8 0.909803 231 8 0.902421 412 8 0.3711530 208 8 0.142547 230 8 0.0000000 147 7 0.3489822 133 8 0.420174 166 8 0.5660395 203 8 0.888379 435 8 0.882414 382 8 0.865651 376 8 0.875296 364 8 0.81617 379 8 0.89577 0.810252 0.841453 0.910410 0.931662 0.848309 0.834174 0.8740950 0.783166 0.926505 0.826723 0.818891 0.8607545 0.883076 0.8804663 0.921975 0.828275 0.803029 0.9063354 0.883277 0.796728 0.8269140 0.877094 0.819946 0.8411965 0.914983 0.730586 0.805985 0.869159 0.856379 0.88935 0.901161 0.294598 0.1250370 0.0293782 0.2305277 0.474643 0.5756883 0.867458 0.841127 0.8294395 0.924860 0.810398 8 0.861330 0.856167 3.0885e-03 8 0.75355 0.70413 0.0494146 3.6313e-02 0.84246535 weaklyHypermeth 1.0000000 1.00000 insignificant 1.1367e-01 0.97322522 insignificant 1.0000000 1.00000 insignificant 0.03167640 0.4034986 insignificant 1 insignificant 0.861156 0.3017479 0.55572600 8 0.68504 0.312554 0.3724907 1.2499e-57 1.0000e+00 hypermethylated 1.3887e-55 1.0000000 hypermethylated 4.2713e-17 1.00000000 hypermethylated 4.7459e-15 1.00000 hypermethylated 0.5338301 1.2307e-03 weaklyHypermeth 3.7294e-02 weaklyHypermeth 0.861504 0.860537 -0.00075609 8 0.83728 0.83602 0.0012534 7.1926e-01 0.10116173 insignificant 1.0000e+00 1.000000 insignificant 5.3686e-01 0.12176808 insignificant 1.0000e+00 1.00000 insignificant -0.0236019 1.9807e-01 insignificant 1.000000 insignificant 0.856167 0.3023041 0.55184711 8 0.70413 0.343809 0.3603252 2.2809e-33 1.0000e+00 hypermethylated 2.2809e-31 1.0000e+00 hypermethylated 1.1204e-13 1.0000e+00 hypermethylated 1.0186e-11 1.0000e+00 hypermethylated 0.50215370 9.1703e-04 hypermethylated 2.9582e-02 hypermethylated 0.856511 0.860537 -0.00236088 8 0.78237 0.83602 -0.0536517 4.0027e-01 0.033418 weaklyHypometh 1.0000e+00 1 insignificant 5.5498e-01 0.026190 weaklyHypometh 1.0000e+00 1 insignificant -0.05527826 1.6031e-01 insignificant 1.000000 insignificant 0.3016605 0.860537 -0.5529000 8 0.270899 0.83602 -0.565124 1.0000e+00 2.1681e-19 hypomethylated 1.0000e+00 2.4090e-17 hypomethylated 1.0000e+00 1.4801e-10 hypomethylated 1.0000e+00 1.6445e-08 hypomethylated -0.55743196 9.7882e-04 hypomethylated 0.04255748 hypomethylated chr19 3221594 3222594 149701 BRUNOL5 ENSG00000161082 0.122777 382 18 0.088366 357 18 0.20085 327 18 0.193743 396 8 0.184139 199 14 0.11051 458 18 0.12553 431 18 0.13517 369 18 0.1532952 369 15 0.12039 484 18 0.268398 442 18 0.111053 467 18 0.1133881 605 18 0.57427 123 8 0.2616479 332 18 0.071242 336 18 0.040798 303 17 0.63962 415 8 0.280299 294 18 0.702481 208 9 0.32614 166 16 0.075751 311 8 0.17154 351 18 0.177490 258 18 0.235392 295 8 0.097693 532 18 0.097607 329 16 0.113067 178 13 0.12092 350 17 0.1043260 616 18 0.060786 545 18 0.113937 604 18 0.0092593 452 18 0.038973 399 18 0.0388889 114 6 0.0612119 247 13 0.045231 218 10 0.0100242 499 18 0.047113 519 18 0.056665 532 18 0.256116 291 13 0.091703 393 18 0.54227 359 18 0.22616 0.146160 0.307023 0.277996 0.175663 0.165846 0.188759 0.1954352 0.208083 0.222495 0.373274 0.159359 0.1387336 0.467265 0.4292630 0.093070 0.115140 0.603001 0.4356125 0.735389 0.277408 0.1182058 0.276236 0.215763 0.3251210 0.150467 0.119299 0.157177 0.180441 0.079539 0.10452 0.170170 0.017530 0.0575069 0.0082765 0.0616356 0.060159 0.0141768 0.080391 0.092602 0.3810918 0.174403 0.499652 8 0.224750 0.150927 8.5168e-02 18 0.21393 0.17577 0.0381530 1.8363e-06 1.00000000 weaklyHypermeth 0.0018363 1.00000 weaklyHypermeth 7.6293e-06 0.99999965 weaklyHypermeth 0.0076293 1.00000 weaklyHypermeth 0.08367796 0.0920962 insignificant 1 insignificant 0.224599 0.0497667 0.19169613 18 0.18214 0.025526 0.1566158 2.5683e-18 1.0000e+00 weaklyHypermeth 9.5124e-17 1.0000000 weaklyHypermeth 1.3316e-21 1.00000000 weaklyHypermeth 3.3289e-19 1.00000 weaklyHypermeth 0.1909668 2.6857e-04 weaklyHypermeth 1.7866e-02 weaklyHypermeth 0.224599 0.206304 0.03894396 18 0.18214 0.18463 -0.0024924 4.1592e-01 0.46464621 insignificant 1.0000e+00 1.000000 insignificant 1.1999e-01 0.99970603 insignificant 1.0000e+00 1.00000 insignificant 0.0261246 8.0862e-01 insignificant 1.000000 insignificant 0.150585 0.0497667 0.12069360 18 0.11197 0.025526 0.0864458 5.5189e-12 1.0000e+00 weaklyHypermeth 1.6724e-10 1.0000e+00 weaklyHypermeth 1.0834e-14 1.0000e+00 weaklyHypermeth 1.4077e-12 1.0000e+00 weaklyHypermeth 0.10728884 4.4298e-04 weaklyHypermeth 1.9124e-02 weaklyHypermeth 0.150585 0.206304 -0.05344587 18 0.11197 0.18463 -0.0726624 9.9940e-01 0.002405 weaklyHypometh 1.0000e+00 1 insignificant 9.3882e-01 0.537174 insignificant 1.0000e+00 1 insignificant -0.05755340 5.7925e-01 insignificant 1.000000 insignificant 0.0497667 0.206304 -0.1742249 18 0.025526 0.18463 -0.159108 1.0000e+00 6.2945e-08 weaklyHypometh 1.0000e+00 3.0789e-06 weaklyHypometh 1.0000e+00 5.2207e-10 weaklyHypometh 1.0000e+00 5.2207e-08 weaklyHypometh -0.16484224 1.5379e-01 insignificant 1.00000000 insignificant chr19 3379215 3380215 149703 NFIC ENSG00000141905 0.687781 475 12 0.551331 217 9 0.56196 263 11 0.748144 465 11 0.726078 141 11 0.79713 513 12 0.46074 228 12 0.57480 250 12 0.7094221 235 12 0.77288 243 12 0.635595 416 12 0.631291 115 8 0.4822715 215 12 0.66424 106 9 0.6135253 292 12 0.851190 94 8 0.883117 32 2 0.40475 729 11 0.521908 302 12 0.486240 447 12 0.61043 145 12 0.502908 299 10 0.54111 319 12 0.545887 76 8 0.491887 384 12 0.628179 334 12 0.545985 259 12 0.536283 87 10 0.59897 250 12 0.6192000 325 11 0.635569 366 12 0.813514 416 12 0.1034118 394 12 0.111775 208 12 0.0028571 277 9 0.0312500 47 2 0.163458 282 11 0.1177526 554 12 0.567973 413 12 0.471065 490 12 0.409899 349 12 0.446610 405 12 0.49571 295 11 0.71830 0.613768 0.637210 0.697608 0.698235 0.781835 0.595721 0.7039796 0.687098 0.733850 0.656579 0.752203 0.4234813 0.710033 0.6321134 0.784250 NA 0.398738 0.5347992 0.592132 0.682670 0.4774470 0.684625 0.637293 0.4877701 0.618728 0.601574 0.630609 0.661064 0.595088 0.58795 0.809864 0.019129 0.0535316 0.0034596 NA 0.035042 0.0771044 0.580639 0.574314 0.3737271 0.475508 0.517589 7 0.633986 0.624885 1.2628e-02 12 0.57245 0.57958 -0.0071344 6.5410e-01 0.95372938 insignificant 1.0000000 1.00000 insignificant 4.4622e-01 0.99844917 insignificant 1.0000000 1.00000 insignificant 0.04905958 0.2172183 insignificant 1 insignificant 0.633478 0.0505969 0.58312015 12 0.52215 0.182279 0.3398710 4.6860e-69 1.0000e+00 hypermethylated 7.8100e-67 1.0000000 hypermethylated 1.9893e-20 0.99999988 hypermethylated 3.3156e-18 1.00000 hypermethylated 0.5498023 8.0929e-12 hypermethylated 2.0232e-09 hypermethylated 0.634032 0.523077 0.10764193 12 0.58097 0.46548 0.1154941 2.9963e-05 0.99998713 weaklyHypermeth 1.6646e-03 1.000000 weaklyHypermeth 8.5367e-08 0.99999999 weaklyHypermeth 1.2195e-05 1.00000 weaklyHypermeth 0.1599684 1.1110e-03 weaklyHypermeth 0.138877 insignificant 0.624501 0.0510783 0.57718945 12 0.53401 0.190671 0.3433349 8.9475e-49 1.0000e+00 hypermethylated 1.1184e-46 1.0000e+00 hypermethylated 5.8409e-16 1.0000e+00 hypermethylated 9.7349e-14 1.0000e+00 hypermethylated 0.50074272 9.4590e-10 hypermethylated 1.8918e-07 hypermethylated 0.624923 0.523053 0.09721112 12 0.58956 0.46740 0.1221641 8.4699e-03 0.999944 weaklyHypermeth 2.0166e-01 1 insignificant 1.8430e-03 0.999996 weaklyHypermeth 1.0841e-01 1 insignificant 0.11090884 1.0984e-02 weaklyHypermeth 0.614779 insignificant 0.0511073 0.522832 -0.4780514 12 0.201887 0.45568 -0.253789 1.0000e+00 9.1300e-35 hypomethylated 1.0000e+00 4.5650e-32 hypomethylated 1.0000e+00 5.0749e-11 hypomethylated 1.0000e+00 7.2498e-09 hypomethylated -0.38983388 2.5161e-06 hypomethylated 0.00062902 hypomethylated chr19 3993876 3994876 149704 ENSG00000188205 0.876892 231 6 0.767435 217 8 0.78380 312 9 0.693352 223 6 0.807147 157 9 0.84151 278 9 0.86714 161 7 0.78147 245 9 0.6881969 199 8 0.87482 246 9 0.862093 310 9 0.762501 141 9 0.9178299 279 9 0.95871 73 2 0.8713678 221 9 0.785379 191 7 0.918771 66 7 0.82576 271 7 0.924529 248 9 0.880823 254 8 0.59886 137 6 0.741123 112 5 0.80310 187 9 0.774124 136 8 0.788434 96 5 0.912838 275 9 0.701018 200 9 0.567677 53 4 0.79375 206 7 0.9115930 246 9 0.860428 219 9 0.900889 310 7 0.7130187 285 9 0.749926 247 9 0.6849003 190 7 0.6445944 102 6 0.680626 133 8 0.7880827 229 8 0.756059 165 6 0.830598 263 6 0.872040 180 6 0.906618 227 6 0.93502 241 6 0.92012 0.833916 0.797878 0.854831 0.850773 0.901823 0.884223 0.8799484 0.898768 0.909559 0.854994 0.873844 0.9332734 0.902261 0.8919096 0.823599 0.920289 0.888287 0.9101301 0.902238 0.854918 0.8394832 0.847649 0.703448 0.8970040 0.911924 0.799384 0.878901 0.870159 0.920299 0.91091 0.926631 0.829011 0.8483366 0.6704024 0.7397026 0.854244 0.7402116 0.899775 0.907652 0.8771726 0.869882 0.934079 6 0.880176 0.861086 1.2458e-02 9 0.70981 0.76496 -0.0551497 1.4528e-01 0.71858903 insignificant 1.0000000 1.00000 insignificant 3.7506e-01 0.34867992 insignificant 1.0000000 1.00000 insignificant 0.05499100 0.1542957 insignificant 1 insignificant 0.880556 0.7626689 0.10882727 9 0.82276 0.735895 0.0868637 4.0249e-09 9.7915e-01 weaklyHypermeth 7.5941e-08 1.0000000 weaklyHypermeth 7.3672e-03 0.95160288 weaklyHypermeth 8.9418e-02 1.00000 weaklyHypermeth 0.1242854 6.1332e-04 weaklyHypermeth 2.1642e-02 weaklyHypermeth 0.880352 0.890335 -0.01358273 6 0.74796 0.88965 -0.1416854 8.8806e-01 0.04162201 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6228e-01 0.06783749 insignificant 1.0000e+00 1.00000 insignificant -0.0255900 4.9605e-01 insignificant 1.000000 insignificant 0.861226 0.7613828 0.09519958 9 0.76769 0.668996 0.0986894 2.0185e-03 9.9515e-01 weaklyHypermeth 2.2707e-02 1.0000e+00 weaklyHypermeth 1.8127e-01 9.9323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06929445 9.5412e-02 insignificant 9.7359e-01 insignificant 0.861687 0.890335 -0.02345125 6 0.79799 0.88965 -0.0916600 8.9211e-01 0.036734 weaklyHypometh 1.0000e+00 1 insignificant 8.7394e-01 0.030167 weaklyHypometh 1.0000e+00 1 insignificant -0.08058100 1.0068e-01 insignificant 1.000000 insignificant 0.7626689 0.890233 -0.1212139 6 0.735895 0.87861 -0.142718 9.9871e-01 7.9777e-04 weaklyHypometh 1.0000e+00 1.4246e-02 weaklyHypometh 9.9751e-01 1.2994e-02 weaklyHypometh 1.0000e+00 2.1657e-01 insignificant -0.14987545 5.0219e-03 weaklyHypometh 0.13572720 insignificant chr19 4009010 4010010 149705 ENSG00000188205 0.796786 239 13 0.714279 329 12 0.64795 322 12 0.795703 436 14 0.793808 178 10 0.78590 614 14 0.86590 282 12 0.92885 120 8 0.7454959 181 11 0.76186 351 12 0.781290 394 12 0.792358 93 11 0.7180417 403 14 0.77631 193 9 0.7251832 297 12 0.716270 84 5 0.621612 29 2 0.61135 472 15 0.690981 284 14 0.683911 401 14 0.92553 117 10 0.747340 182 10 0.76926 238 14 0.657315 148 11 0.638101 173 13 0.750892 466 15 0.545413 381 12 0.624566 126 11 0.80156 434 13 0.8015164 447 14 0.804136 539 14 0.803202 552 16 0.0924328 323 14 0.016284 255 14 0.2004599 253 12 0.2957122 211 12 0.097083 255 11 0.2254007 602 16 0.632452 240 14 0.818123 403 16 0.750562 259 16 0.759482 249 13 0.82460 283 15 0.91556 0.833288 0.728067 0.925644 0.791513 0.880981 0.855883 0.9071830 0.820057 0.854565 0.828655 0.862168 0.8002439 0.847658 0.8315384 0.671236 0.724752 0.786948 0.7637811 0.827055 0.944510 0.8615698 0.793175 0.757100 0.8024612 0.900157 0.835518 0.810400 0.814905 0.877802 0.82619 0.897559 0.040165 0.0180392 0.1733938 0.2949799 0.051613 0.3475303 0.772517 0.860663 0.8594724 0.789683 0.877889 10 0.842078 0.848421 -1.5078e-02 12 0.60868 0.60347 0.0052094 9.9877e-01 0.63929439 insignificant 1.0000000 1.00000 insignificant 9.8618e-01 0.70419952 insignificant 1.0000000 1.00000 insignificant 0.00862168 0.8067415 insignificant 1 insignificant 0.843020 0.1611374 0.67392067 12 0.73682 0.131003 0.6058181 4.3078e-106 1.0000e+00 hypermethylated 4.3078e-103 1.0000000 hypermethylated 3.5986e-25 1.00000000 hypermethylated 1.1995e-22 1.00000 hypermethylated 0.5931300 4.7767e-06 hypermethylated 3.9805e-04 hypermethylated 0.842549 0.818689 -0.00440763 12 0.65077 0.75072 -0.0999495 7.9433e-01 0.33795609 insignificant 1.0000e+00 1.000000 insignificant 9.3187e-01 0.38572677 insignificant 1.0000e+00 1.00000 insignificant -0.0093526 8.1665e-01 insignificant 1.000000 insignificant 0.849499 0.1612223 0.68757592 14 0.71554 0.138281 0.5772626 3.2526e-82 1.0000e+00 hypermethylated 3.2526e-79 1.0000e+00 hypermethylated 4.7342e-22 1.0000e+00 hypermethylated 2.3671e-19 1.0000e+00 hypermethylated 0.58450831 4.3967e-07 hypermethylated 5.4959e-05 hypermethylated 0.850211 0.818562 0.01245277 14 0.69399 0.73826 -0.0442711 2.1282e-01 0.822686 insignificant 1.0000e+00 1 insignificant 5.2429e-01 0.850725 insignificant 1.0000e+00 1 insignificant -0.01797424 7.0286e-01 insignificant 1.000000 insignificant 0.1613073 0.819580 -0.6755923 14 0.138281 0.79251 -0.654231 1.0000e+00 3.6418e-44 hypomethylated 1.0000e+00 3.6418e-41 hypomethylated 1.0000e+00 1.2506e-15 hypomethylated 1.0000e+00 1.2506e-12 hypomethylated -0.60248255 1.6434e-06 hypomethylated 0.00062902 hypomethylated chr19 4298165 4299165 149706 MPND ENSG00000008382 0.848594 271 9 0.771206 108 9 0.78333 143 9 0.882127 148 9 0.859039 65 7 0.85769 344 9 0.85761 112 9 0.89459 123 9 0.7927141 103 8 0.84659 141 9 0.784867 236 9 0.787157 73 9 0.7771040 142 9 NA 0 0 0.8681873 189 9 0.827160 127 9 0.729189 88 9 0.87850 149 9 0.796175 264 9 0.897533 347 9 0.82980 59 5 0.860606 88 9 0.81453 122 9 0.895833 42 4 0.847090 57 6 0.840620 267 9 0.837875 55 6 0.868855 60 6 0.88115 111 9 0.8287528 271 9 0.825657 258 9 0.870952 447 9 0.6781189 105 9 0.825353 86 9 0.8051998 234 9 0.8110730 117 9 0.839689 98 8 0.8065776 265 9 0.822498 222 9 0.832679 284 9 0.802253 187 9 0.888679 272 9 0.83197 203 9 0.86727 0.766064 0.769644 0.913221 0.842155 0.863793 0.887363 0.8917630 0.819200 0.858731 0.769241 0.841042 0.8211699 NA 0.8669551 0.862247 0.755148 0.881934 0.7996018 0.913132 0.826664 0.8410274 0.817261 0.865502 0.8339529 0.867936 0.794567 0.893573 0.887166 0.838132 0.82912 0.872397 0.694010 0.8062061 0.7991915 0.7935239 0.803146 0.8227235 0.816929 0.827973 0.7790988 0.915956 0.828032 6 0.842736 0.857376 -1.0134e-02 9 0.83126 0.84488 -0.0136194 8.3673e-01 0.08291409 insignificant 1.0000000 1.00000 insignificant 4.6418e-01 0.02606545 weaklyHypometh 1.0000000 1.00000 insignificant -0.02175546 0.1149638 insignificant 1 insignificant 0.842736 0.8121547 0.03950857 9 0.83126 0.801012 0.0302487 1.3476e-04 6.5896e-01 weaklyHypermeth 1.5141e-03 1.0000000 weaklyHypermeth 5.5692e-04 0.74457626 weaklyHypermeth 9.7281e-03 1.00000 weaklyHypermeth 0.0340524 2.3566e-01 insignificant 1.0000e+00 insignificant 0.842736 0.847603 -0.00990126 9 0.83126 0.84371 -0.0124529 8.9302e-01 0.20293368 insignificant 1.0000e+00 1.000000 insignificant 6.8041e-01 0.52259911 insignificant 1.0000e+00 1.00000 insignificant -0.0072279 7.0048e-01 insignificant 1.000000 insignificant 0.857376 0.8121547 0.04845152 9 0.84488 0.801012 0.0438681 1.8771e-04 9.6509e-01 weaklyHypermeth 2.5028e-03 1.0000e+00 weaklyHypermeth 7.2941e-04 9.8411e-01 weaklyHypermeth 1.3447e-02 1.0000e+00 weaklyHypermeth 0.05580787 6.6925e-02 insignificant 7.7690e-01 insignificant 0.857376 0.847603 0.00343111 9 0.84488 0.84371 0.0011666 6.6692e-01 0.615228 insignificant 1.0000e+00 1 insignificant 2.3534e-01 0.852671 insignificant 1.0000e+00 1 insignificant 0.01452752 4.0035e-01 insignificant 1.000000 insignificant 0.8121547 0.847603 -0.0454681 9 0.801012 0.84371 -0.042702 9.5674e-01 5.7276e-03 weaklyHypometh 1.0000e+00 7.5364e-02 weaklyHypometh 8.6444e-01 1.1423e-02 weaklyHypometh 1.0000e+00 1.9695e-01 insignificant -0.04128035 1.7660e-01 insignificant 1.00000000 insignificant chr19 5355907 5356907 149712 PTPRS ENSG00000105426 0.730240 146 5 0.683810 59 5 0.58913 112 5 0.779426 55 5 0.555766 64 4 0.68239 227 5 0.63480 148 5 0.67904 114 5 0.5765217 74 5 0.68694 80 4 0.779863 139 5 0.670844 76 4 0.6547619 76 4 0.75000 12 2 0.7260684 111 5 0.586960 63 5 0.723320 95 5 0.78962 70 4 0.698019 121 5 0.754441 219 5 0.72894 51 4 0.726111 66 4 0.78024 114 5 0.758095 46 4 0.757778 40 4 0.609004 143 5 0.644286 37 4 0.755556 31 3 0.63444 99 5 0.7357656 172 5 0.677080 187 5 0.746011 262 5 0.6775238 86 4 0.584392 99 5 0.6953629 112 4 0.5661058 59 4 0.768421 50 5 0.7205367 167 5 0.683773 125 5 0.674078 147 5 0.726389 74 4 0.761792 106 4 0.80652 135 5 0.69369 0.692344 0.633540 0.795493 0.616980 0.675171 0.652318 0.6883291 0.604518 0.734803 0.779126 0.716363 0.7216970 0.723007 0.7372214 0.688885 0.704881 0.763883 0.6732786 0.735883 0.752271 0.6992647 0.746957 0.721405 0.7245098 0.675895 0.591246 0.730392 0.649020 0.726399 0.68776 0.712974 0.636835 0.5619099 0.6450081 0.6070419 0.731424 0.6814281 0.668135 0.701041 0.6935934 0.735082 0.778264 4 0.701601 0.682692 -2.2470e-03 5 0.69477 0.70158 -0.0068156 7.9505e-01 0.55435692 insignificant 1.0000000 1.00000 insignificant 7.7432e-01 0.14740879 insignificant 1.0000000 1.00000 insignificant -0.02617726 0.2591895 lowCoverage 1 lowCoverage 0.701601 0.6352531 0.05609276 4 0.69477 0.679912 0.0148558 8.8890e-03 7.3105e-01 lowCoverage 7.7295e-02 1.0000000 lowCoverage 5.3105e-03 0.34969051 lowCoverage 6.8967e-02 1.00000 lowCoverage 0.0178744 6.3194e-01 lowCoverage 1.0000e+00 lowCoverage 0.701601 0.739353 -0.01483823 5 0.69477 0.72351 -0.0287425 8.0224e-01 0.05746793 insignificant 1.0000e+00 1.000000 insignificant 7.7101e-01 0.01135288 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0439115 1.7317e-01 lowCoverage 1.000000 lowCoverage 0.682692 0.6352531 0.05796224 4 0.70158 0.679912 0.0216713 3.9120e-03 8.6408e-01 lowCoverage 4.1617e-02 1.0000e+00 lowCoverage 2.7072e-02 9.1954e-01 lowCoverage 2.9750e-01 1.0000e+00 lowCoverage 0.04405168 2.5847e-01 lowCoverage 1.0000e+00 lowCoverage 0.682692 0.739353 -0.00972496 5 0.70158 0.72351 -0.0219270 8.5896e-01 0.129660 insignificant 1.0000e+00 1 insignificant 8.4606e-01 0.136369 insignificant 1.0000e+00 1 insignificant -0.01773420 5.6596e-01 lowCoverage 1.000000 lowCoverage 0.6352531 0.739353 -0.0683231 4 0.679912 0.72351 -0.043598 9.0304e-01 1.6381e-03 lowCoverage 1.0000e+00 2.7764e-02 lowCoverage 9.0874e-01 8.9456e-03 lowCoverage 1.0000e+00 1.6020e-01 lowCoverage -0.06178588 1.6243e-01 lowCoverage 1.00000000 lowCoverage chr19 5600224 5601224 149718 SAFB ENSG00000160633 0.953169 279 7 0.906443 313 7 0.76610 188 7 0.978611 243 7 0.830553 227 7 0.86500 434 7 0.91634 181 7 0.77464 270 7 0.7915524 159 7 0.92985 237 7 0.810565 411 7 0.822861 85 7 0.8252397 228 7 0.83373 172 7 0.9603457 325 7 0.964286 61 6 0.800000 14 0 0.96140 295 7 0.962214 576 7 0.948108 376 7 0.85461 60 7 0.649594 105 7 0.96589 211 7 0.700533 146 7 0.781944 77 7 0.932685 296 7 0.922874 259 7 0.556638 90 8 0.75421 400 7 0.9432836 309 7 0.956017 317 7 0.960895 554 7 0.8874691 248 7 0.930137 241 7 0.9174529 511 7 0.9166667 12 0 0.798029 108 8 0.9376373 466 7 0.952987 296 7 0.866521 333 7 0.971350 216 6 0.991923 252 4 0.97124 270 6 0.95802 0.895608 0.908575 0.971480 0.928961 0.959859 0.913569 0.9580971 0.903811 0.898352 0.943169 0.910060 0.9473329 0.953459 0.9374155 0.967969 0.807238 0.948795 0.9547668 0.943944 0.889847 0.9007787 0.949549 0.958032 0.9807726 0.924513 0.904746 0.947146 0.967418 0.917785 0.95334 0.964642 0.872779 0.9361689 0.8476468 0.8642967 0.868465 0.9290987 0.940652 0.960029 0.9635130 0.982424 0.956976 6 0.939890 0.940092 -3.2834e-03 7 0.77464 0.61878 0.1558616 7.3757e-01 0.97588590 insignificant 1.0000000 1.00000 insignificant 7.3112e-01 0.98223763 insignificant 1.0000000 1.00000 insignificant 0.04845239 0.2858480 insignificant 1 insignificant 0.940629 0.8915511 0.04883230 7 0.82158 0.841137 -0.0195556 4.5487e-02 7.2671e-01 weaklyHypermeth 3.6683e-01 1.0000000 insignificant 7.6800e-01 0.69599388 insignificant 1.0000e+00 1.00000 insignificant -0.0178486 5.2007e-01 insignificant 1.0000e+00 insignificant 0.940316 0.955344 -0.01375827 7 0.80857 0.93170 -0.1231366 9.9815e-01 0.04933568 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9945e-01 0.01569292 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0707544 2.9595e-02 weaklyHypometh 0.896810 insignificant 0.943295 0.8915511 0.05293833 7 0.79449 0.841137 -0.0466429 1.1935e-01 7.8940e-01 insignificant 8.9070e-01 1.0000e+00 insignificant 8.1484e-01 4.1458e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06630094 1.6671e-01 insignificant 1.0000e+00 insignificant 0.941658 0.955377 -0.01473489 7 0.65143 0.93739 -0.2859684 9.9963e-01 0.027550 weaklyHypometh 1.0000e+00 1 insignificant 9.9996e-01 0.028508 weaklyHypometh 1.0000e+00 1 insignificant -0.11920681 2.0626e-02 weaklyHypometh 0.825059 insignificant 0.8915511 0.955246 -0.0662817 7 0.841137 0.91653 -0.075389 9.2508e-01 1.5686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7104e-01 2.1781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05290587 1.1750e-01 insignificant 1.00000000 insignificant chr19 6017448 6018448 149719 RANBP3 ENSG00000031823 0.504266 282 6 0.454916 248 9 0.48975 231 9 0.412304 296 5 0.555481 128 8 0.51427 301 6 0.50146 157 8 0.55089 182 7 0.5111257 143 8 0.62317 161 8 0.557681 229 8 0.504861 77 8 0.3821670 259 8 NA 0 0 0.4698363 177 8 0.618871 57 7 0.477721 96 8 0.38924 294 5 0.517258 168 8 0.430754 305 5 0.56743 91 8 0.105554 165 5 0.52809 227 7 0.632479 91 8 0.347926 106 5 0.506513 220 7 0.440657 77 6 0.520157 54 5 0.52469 196 8 0.4344495 289 9 0.396247 242 7 0.693732 258 7 0.1652135 343 9 0.130231 111 8 0.0227273 140 8 0.0000000 49 5 0.109848 120 8 0.3637174 221 9 0.049255 342 5 0.347259 296 5 0.115898 286 5 0.111686 321 5 0.23565 307 5 0.33213 0.379453 0.347409 0.287574 0.408149 0.427250 0.273276 0.4434864 0.308890 0.445033 0.392961 0.346470 0.1891923 NA 0.2659659 0.531609 0.330910 0.252743 0.2927089 0.306020 0.409056 0.1168184 0.460833 0.357195 0.3654584 0.309238 0.403889 0.372032 0.318337 0.265491 0.26585 0.602040 0.041152 0.0248626 0.0000000 0.0000000 0.053814 0.1907195 0.088226 0.181257 0.1901719 0.174466 0.094916 5 0.479293 0.459821 -3.5086e-02 8 0.47372 0.50137 -0.0276560 9.6519e-01 0.00070488 weaklyHypometh 1.0000000 0.35244 insignificant 9.3488e-01 0.00051004 weaklyHypometh 1.0000000 0.51004 insignificant 0.02338514 0.6211779 insignificant 1 insignificant 0.479271 0.1971545 0.29742022 8 0.47080 0.178354 0.2924440 1.1470e-25 1.0000e+00 hypermethylated 6.7470e-24 1.0000000 hypermethylated 2.1389e-15 1.00000000 hypermethylated 1.7824e-13 1.00000 hypermethylated 0.3662558 6.2761e-04 hypermethylated 2.1642e-02 hypermethylated 0.479271 0.166237 0.20034732 5 0.47080 0.15859 0.3122066 1.3350e-20 1.00000000 hypermethylated 4.4500e-18 1.000000 hypermethylated 6.5430e-10 0.99999783 hypermethylated 1.6357e-07 1.00000 hypermethylated 0.3262615 2.4834e-03 weaklyHypermeth 0.239227 insignificant 0.459970 0.1971545 0.31630405 8 0.51264 0.178354 0.3342839 1.7869e-15 1.0000e+00 hypermethylated 6.3818e-14 1.0000e+00 hypermethylated 1.1393e-14 1.0000e+00 hypermethylated 1.4077e-12 1.0000e+00 hypermethylated 0.34287067 3.4794e-04 hypermethylated 1.7397e-02 hypermethylated 0.459970 0.166237 0.22796052 5 0.51264 0.15859 0.3540466 1.2764e-11 1.000000 hypermethylated 3.1910e-09 1 hypermethylated 1.7113e-06 1.000000 hypermethylated 4.2783e-04 1 hypermethylated 0.30287639 1.4656e-03 weaklyHypermeth 0.271637 insignificant 0.1971545 0.166237 -0.0605737 5 0.178354 0.15859 0.019763 9.6721e-01 1.5665e-02 weaklyHypometh 1.0000e+00 1.8006e-01 insignificant 9.9908e-01 7.5741e-03 weaklyHypometh 1.0000e+00 1.4291e-01 insignificant -0.03999429 6.0780e-01 insignificant 1.00000000 insignificant chr19 6167560 6168560 149721 ACSBG2 ENSG00000130377 0.783462 333 13 0.559856 359 12 0.76169 209 15 0.713865 344 15 0.629334 138 13 0.58952 428 16 0.75074 92 7 0.81401 284 11 0.7731605 144 8 0.84305 207 13 0.816584 456 15 0.598554 80 7 0.7567352 321 13 0.70274 187 8 0.5603706 210 12 0.666667 30 1 0.772727 315 3 0.48603 616 12 0.806983 445 11 0.712188 367 11 0.67914 184 13 0.214934 229 9 0.67097 196 14 0.559079 187 13 0.605678 273 13 0.693697 444 15 0.659928 340 12 0.703392 133 11 0.66641 365 12 0.5912936 478 13 0.662248 492 12 0.799637 338 15 0.7843271 320 15 0.731362 327 11 0.8672023 289 9 0.7274769 125 8 0.613145 201 11 0.7062545 538 13 0.228378 494 13 0.137551 503 13 0.316883 344 11 0.236480 547 11 0.38367 364 13 0.73689 0.569306 0.728486 0.597063 0.475774 0.558421 0.726847 0.8094767 0.719640 0.795659 0.761696 0.413623 0.6083231 0.673577 0.4781227 0.544647 0.894379 0.486704 0.7368850 0.652805 0.656294 0.1390562 0.623238 0.622480 0.5989597 0.662205 0.611215 0.610541 0.699578 0.594232 0.59524 0.785633 0.644145 0.6447750 0.8464291 0.6012693 0.740596 0.6657962 0.093720 0.099464 0.1859516 0.107453 0.250742 6 0.669603 0.644438 6.0505e-02 11 0.65130 0.63188 0.0194174 5.3474e-02 0.99987089 insignificant 1.0000000 1.00000 insignificant 1.7923e-01 0.99920733 insignificant 1.0000000 1.00000 insignificant 0.07937952 0.1099385 insignificant 1 insignificant 0.669606 0.7105556 -0.06046003 11 0.67103 0.659122 0.0119091 3.5401e-01 1.3275e-05 weaklyHypometh 1.0000e+00 0.0066376 weaklyHypometh 8.0139e-01 0.00042656 weaklyHypometh 1.0000e+00 0.42656 insignificant -0.0333815 4.3855e-01 insignificant 1.0000e+00 insignificant 0.669973 0.115009 0.53194933 11 0.70896 0.25226 0.4567048 7.9624e-57 1.00000000 hypermethylated 7.9624e-54 1.000000 hypermethylated 3.1841e-20 1.00000000 hypermethylated 3.1841e-17 1.00000 hypermethylated 0.4443214 4.8205e-05 hypermethylated 0.024102 hypermethylated 0.644676 0.7113459 -0.10435958 11 0.63947 0.721895 -0.0824259 9.4427e-01 4.5055e-10 weaklyHypometh 1.0000e+00 4.5055e-07 weaklyHypometh 9.0521e-01 4.7944e-08 weaklyHypometh 1.0000e+00 4.7944e-05 weaklyHypometh -0.11276102 5.2895e-02 insignificant 6.4506e-01 insignificant 0.645604 0.115060 0.48415192 11 0.65478 0.26487 0.3899034 5.3370e-29 1.000000 hypermethylated 5.3370e-26 1 hypermethylated 1.3713e-14 1.000000 hypermethylated 1.3713e-11 1 hypermethylated 0.36494186 5.3237e-05 hypermethylated 0.053237 hypermethylated 0.7131696 0.115060 0.6015466 11 0.749657 0.26487 0.484784 2.4767e-36 1.0000e+00 hypermethylated 2.4767e-33 1.0000e+00 hypermethylated 1.7043e-11 1.0000e+00 hypermethylated 1.7043e-08 1.0000e+00 hypermethylated 0.47770288 1.8126e-05 hypermethylated 0.00362523 hypermethylated chr19 6510567 6511567 149722 TNFSF9 ENSG00000125657 0.720837 172 5 0.758500 229 5 0.77373 154 5 0.646742 149 5 NA 0 0 0.73802 150 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.82196 231 5 NA 0 0 0.769570 167 5 NA 0 0 NA 0 0 0.72751 111 5 NA 0 0 NA 0 0 0.760699 122 5 NA 0 0 NA 0 0 NA 0 0 0.6724543 148 5 0.697452 127 5 0.719710 196 5 0.7141511 185 5 NA 0 0 0.7070925 129 5 NA 0 0 NA 0 0 0.6790918 246 5 0.698188 188 5 0.679483 185 5 0.802347 192 5 0.767471 194 5 0.82390 259 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.721246 0.674716 4.4317e-02 5 0.75671 0.71410 0.0426096 9.6124e-02 0.98601359 insignificant 1.0000000 1.00000 insignificant 3.3692e-01 0.95569941 insignificant 1.0000000 1.00000 insignificant 0.03148598 0.2430181 lowCoverage 1 lowCoverage 0.721246 0.6696429 0.03633364 5 0.75671 0.701064 0.0556417 2.2933e-03 9.4263e-01 weaklyHypermeth 2.1433e-02 1.0000000 weaklyHypermeth 1.1555e-01 0.94658847 insignificant 9.5495e-01 1.00000 insignificant 0.0469398 7.7921e-02 lowCoverage 8.6579e-01 lowCoverage 0.721246 0.720039 -0.00232015 5 0.75671 0.75631 0.0003919 6.4052e-01 0.64239681 insignificant 1.0000e+00 1.000000 insignificant 7.4967e-01 0.61576062 insignificant 1.0000e+00 1.00000 insignificant -0.0072260 8.4181e-01 lowCoverage 1.000000 lowCoverage 0.674716 0.6696429 -0.00255348 5 0.71410 0.701064 0.0130321 3.1409e-01 3.9639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9371e-01 7.4667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01545387 4.3008e-01 lowCoverage 1.0000e+00 lowCoverage 0.674716 0.720039 -0.04377973 5 0.71410 0.75631 -0.0422177 9.2480e-01 0.054106 insignificant 1.0000e+00 1 insignificant 9.3468e-01 0.102191 insignificant 1.0000e+00 1 insignificant -0.03871202 2.7139e-01 lowCoverage 1.000000 lowCoverage 0.6696429 0.720039 -0.0391427 5 0.701064 0.75631 -0.055250 9.5263e-01 2.2124e-02 weaklyHypometh 1.0000e+00 2.4583e-01 insignificant 9.7905e-01 5.5934e-02 insignificant 1.0000e+00 7.2642e-01 insignificant -0.05416589 1.3368e-01 lowCoverage 1.00000000 lowCoverage chr19 7865454 7866454 149725 LRRC8E ENSG00000171017 0.821176 178 7 0.616882 221 10 0.64731 289 9 0.608821 146 7 0.614593 179 9 0.66932 238 10 0.65137 307 9 0.72873 230 10 0.7443855 179 10 0.72737 206 10 0.792184 366 10 0.608539 153 8 0.7449679 337 10 0.81618 48 3 0.5676493 218 9 0.767523 121 6 0.720198 111 6 0.70764 204 7 0.791345 257 9 0.649876 204 8 0.78080 110 10 0.361797 78 4 0.64195 216 9 0.858704 128 10 0.730288 69 5 0.752757 432 10 0.831357 163 9 0.914815 83 7 0.68615 296 9 0.6850582 441 10 0.715576 342 10 0.743867 276 10 0.4407110 250 10 0.621222 276 10 0.6689113 138 6 0.5575397 56 5 0.576852 121 10 0.6184139 374 10 0.588786 160 9 0.467781 216 9 0.489132 147 5 0.278714 211 6 0.50045 149 8 0.79720 0.624170 0.715813 0.699494 0.654470 0.745780 0.735324 0.7795319 0.760632 0.788142 0.810495 0.698517 0.7285088 0.745483 0.6403544 0.805050 0.817188 0.691741 0.7936401 0.731492 0.744361 0.4693585 0.670093 0.841046 0.7816594 0.761309 0.842623 0.924462 0.666656 0.768757 0.66779 0.793739 0.411886 0.5199707 0.5564633 0.5900766 0.620654 0.6234784 0.624151 0.508125 0.4101419 0.402850 0.487691 3 0.739742 0.765376 -2.1286e-02 10 0.73931 0.68176 0.0575460 8.8718e-01 0.05596362 insignificant 1.0000000 1.00000 insignificant 9.2204e-01 0.04407241 weaklyHypometh 1.0000000 1.00000 insignificant -0.02545623 0.5676677 insignificant 1 insignificant 0.739680 0.5794239 0.16638717 10 0.71324 0.589894 0.1233455 5.8916e-11 8.6274e-01 weaklyHypermeth 1.2535e-09 1.0000000 weaklyHypermeth 5.1423e-05 0.96756092 weaklyHypermeth 1.1687e-03 1.00000 weaklyHypermeth 0.1191948 1.1173e-02 weaklyHypermeth 2.0581e-01 insignificant 0.739742 0.482446 0.23464741 7 0.73931 0.54337 0.1959416 4.3227e-21 0.99999951 hypermethylated 2.1614e-18 1.000000 hypermethylated 5.8053e-10 1.00000000 hypermethylated 1.6357e-07 1.00000 hypermethylated 0.2348305 7.3941e-03 weaklyHypermeth 0.419572 insignificant 0.765667 0.5794239 0.18810414 10 0.74994 0.589894 0.1600450 5.9996e-08 9.9909e-01 weaklyHypermeth 1.3332e-06 1.0000e+00 weaklyHypermeth 3.2198e-04 9.9998e-01 weaklyHypermeth 6.4395e-03 1.0000e+00 weaklyHypermeth 0.14465105 1.2646e-02 weaklyHypermeth 2.3849e-01 insignificant 0.765376 0.482446 0.23667646 7 0.68176 0.54337 0.1383957 9.4593e-16 1.000000 hypermethylated 4.7297e-13 1 hypermethylated 6.6597e-09 1.000000 hypermethylated 3.3298e-06 1 hypermethylated 0.26028673 2.8982e-03 weaklyHypermeth 0.322017 insignificant 0.5794239 0.481859 0.0481348 7 0.589894 0.49770 0.092190 5.9574e-02 8.8338e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5340e-01 9.5823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.11563568 9.6667e-02 insignificant 1.00000000 insignificant chr19 8317140 8318140 149727 KANK3 ENSG00000186994 0.826773 797 8 0.655038 379 11 0.81448 108 8 0.853578 631 8 0.790837 101 7 0.79505 533 11 0.79965 192 10 0.85345 128 8 0.7727522 136 11 0.79419 117 8 0.824170 564 11 0.869792 48 6 0.7203512 112 6 0.82539 121 8 0.7620602 124 8 0.851786 82 5 0.834330 124 4 0.65490 721 6 0.825980 230 5 0.916164 510 6 0.79474 76 5 0.888889 74 4 0.68917 237 6 0.861616 77 8 0.833167 206 4 0.693812 497 11 0.784135 89 6 0.856209 68 3 0.82266 307 11 0.7704889 410 11 0.717233 251 9 0.711579 192 8 0.7567240 291 8 0.741876 161 9 0.5363057 651 8 0.8125000 14 0 0.574490 264 11 0.5225552 263 8 0.734506 576 8 0.875502 513 11 0.743729 929 7 0.775783 881 4 0.79307 484 11 0.86710 0.852559 0.923232 0.911787 0.856252 0.905366 0.750000 0.8835006 0.698963 0.903694 0.907513 0.843146 0.8052907 0.725609 0.7610209 0.954193 0.947852 0.890296 0.9278204 0.933156 0.865580 0.9375920 0.848541 0.935990 0.7116708 0.792846 0.879682 0.869039 0.897985 0.928958 0.66659 0.659829 0.841923 0.8999455 0.6239850 0.8251521 0.862399 0.6136636 0.924491 0.938345 0.8904193 0.654893 0.926625 3 0.888329 0.836957 6.1032e-02 8 0.67873 0.67449 0.0042488 4.7235e-02 0.70097545 weaklyHypermeth 1.0000000 1.00000 insignificant 4.1097e-01 0.77835710 insignificant 1.0000000 1.00000 insignificant 0.01672820 0.5078881 insignificant 1 insignificant 0.888329 0.7311436 0.16748315 8 0.67873 0.482854 0.1958805 6.6347e-12 9.9995e-01 weaklyHypermeth 1.5079e-10 1.0000000 weaklyHypermeth 1.1403e-04 0.99999748 weaklyHypermeth 2.4262e-03 1.00000 weaklyHypermeth 0.1446276 3.7534e-02 weaklyHypermeth 4.9387e-01 insignificant 0.889546 0.865504 0.04566411 5 0.81613 0.76616 0.0499742 1.0213e-01 0.47556553 insignificant 1.0000e+00 1.000000 insignificant 3.0993e-01 0.66740289 insignificant 1.0000e+00 1.00000 insignificant 0.0175191 5.6545e-01 insignificant 1.000000 insignificant 0.836957 0.7311436 0.11098219 8 0.67449 0.482854 0.1916317 1.2811e-04 1.0000e+00 weaklyHypermeth 1.7312e-03 1.0000e+00 weaklyHypermeth 5.7332e-03 1.0000e+00 weaklyHypermeth 7.8537e-02 1.0000e+00 weaklyHypermeth 0.12789941 5.7651e-02 insignificant 6.9459e-01 insignificant 0.837434 0.865504 -0.02085225 5 0.75321 0.76616 -0.0129474 7.4438e-01 0.585787 insignificant 1.0000e+00 1 insignificant 7.6415e-01 0.874482 insignificant 1.0000e+00 1 insignificant 0.00079093 9.8088e-01 insignificant 1.000000 insignificant 0.7333740 0.865504 -0.1341691 5 0.594282 0.76616 -0.171879 9.9798e-01 1.7018e-03 weaklyHypometh 1.0000e+00 2.8364e-02 weaklyHypometh 9.9988e-01 6.1995e-02 insignificant 1.0000e+00 7.9481e-01 insignificant -0.12710848 6.2574e-02 insignificant 0.89390990 insignificant chr19 10658293 10659293 149741 ILF3 ENSG00000129351 0.914287 901 13 0.952392 769 14 0.81902 491 14 0.965444 860 13 0.936309 357 14 0.92503 896 14 0.86953 599 14 0.85692 477 14 0.9424603 368 12 0.95646 369 10 0.949702 793 14 0.956820 230 10 0.9307042 323 12 0.97601 258 8 0.8021742 482 12 0.612698 131 10 0.882325 81 4 0.88754 1457 13 0.826753 684 13 0.934382 824 14 0.81985 262 14 0.730903 89 6 0.76218 487 13 0.880431 161 10 0.807368 134 8 0.883220 737 14 0.708995 350 13 0.792474 174 12 0.86016 608 14 0.8437907 803 14 0.838822 897 14 0.933702 737 13 0.7991887 472 14 0.768764 570 14 0.7852183 385 11 1.0000000 3 0 0.751508 260 14 0.8246557 670 14 0.747483 673 13 0.811105 891 14 0.767293 692 10 0.930849 1111 10 0.84831 658 13 0.94349 0.955050 0.902279 0.967171 0.931623 0.915052 0.936541 0.9301861 0.940532 0.936207 0.944541 0.953989 0.9323456 0.964265 0.9249746 0.874547 0.911271 0.915278 0.9547170 0.952069 0.884055 0.9210163 0.906751 0.935209 0.8901865 0.944311 0.843777 0.854375 0.928045 0.962620 0.95666 0.944185 0.901825 0.8662168 0.9720325 NA 0.883903 0.9140203 0.889193 0.941696 0.9435779 0.932718 0.939499 8 0.935666 0.928427 6.1461e-03 14 0.82895 0.80284 0.0261067 2.1928e-01 0.90630973 insignificant 1.0000000 1.00000 insignificant 2.4035e-01 0.89309523 insignificant 1.0000000 1.00000 insignificant 0.07302374 0.0108299 weaklyHypermeth 1 insignificant 0.935808 0.8711864 0.06037980 13 0.83854 0.757272 0.0812685 2.8129e-08 2.1889e-01 weaklyHypermeth 4.9350e-07 1.0000000 weaklyHypermeth 1.6531e-01 0.24155200 insignificant 1.0000e+00 1.00000 insignificant 0.0732929 1.1748e-01 insignificant 1.0000e+00 insignificant 0.935808 0.924472 0.01100406 13 0.83854 0.79031 0.0482331 1.9402e-03 0.85120379 weaklyHypermeth 5.7066e-02 1.000000 weaklyHypermeth 1.1399e-02 0.88053093 weaklyHypermeth 3.6772e-01 1.00000 insignificant 0.0738405 9.0599e-02 insignificant 1.000000 insignificant 0.929085 0.8711864 0.04744606 13 0.82837 0.757272 0.0711002 4.5233e-05 4.1539e-01 weaklyHypermeth 6.7511e-04 1.0000e+00 weaklyHypermeth 1.6598e-01 2.4849e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00026912 9.9502e-01 insignificant 1.0000e+00 insignificant 0.929085 0.924472 0.00310330 13 0.82837 0.79031 0.0380647 1.1641e-02 0.460958 weaklyHypermeth 2.6457e-01 1 insignificant 9.5060e-02 0.536971 insignificant 1.0000e+00 1 insignificant 0.00081675 9.8332e-01 insignificant 1.000000 insignificant 0.8711864 0.924472 -0.0420900 12 0.757272 0.79031 -0.033035 4.8016e-01 1.3717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5961e-01 5.8061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00054763 9.9139e-01 insignificant 1.00000000 insignificant chr19 10813136 10814136 149744 TMED1 ENSG00000099203 0.708003 40 4 0.447993 81 5 0.63333 39 5 0.832401 45 5 0.710806 42 5 0.78601 57 5 0.67524 57 5 0.71833 78 5 0.6666667 26 5 0.92000 23 4 0.731500 86 5 0.746667 23 4 0.8972222 22 2 0.83000 20 2 0.7761905 29 4 0.866667 14 0 0.521988 100 5 0.72121 47 4 0.763333 71 5 0.668182 53 5 0.55000 10 0 NA 0 0 0.77143 32 4 0.813333 23 4 0.833333 12 0 0.797795 119 5 0.500000 18 1 0.566667 14 0 0.68951 50 4 0.7563192 78 5 0.784392 74 5 0.548413 50 5 0.6506133 55 5 0.702564 54 4 0.6666667 34 4 0.7400000 24 4 0.666997 43 5 0.7651196 101 5 0.816667 103 5 0.700839 110 5 0.632275 45 5 0.771429 27 4 0.68826 84 5 0.68700 0.524276 0.541667 0.771329 0.657738 0.732517 0.641667 0.6479167 0.750000 0.900000 0.684375 0.683333 0.9083333 0.787500 0.7202381 0.833333 0.552484 0.651515 0.7041667 0.585227 0.500000 NA 0.714286 0.766667 0.8333333 0.747244 0.375000 0.583333 0.611888 0.745399 0.69048 0.525000 0.672348 0.6282051 0.5000000 0.6750000 0.778274 0.7177632 0.725000 0.694777 0.5555556 0.714286 0.788636 0 0.699895 0.725000 -2.7512e-02 5 0.67828 0.69684 -0.0185568 8.8750e-01 0.11491519 insignificant 1.0000000 1.00000 insignificant 2.0617e-01 0.70341294 insignificant 1.0000000 1.00000 insignificant 0.03916101 0.4040259 lowCoverage 1 lowCoverage 0.699895 0.7073955 -0.00870354 5 0.67828 0.697394 -0.0191137 8.1506e-01 6.6412e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.7526e-01 0.89353875 insignificant 1.0000e+00 1.00000 insignificant 0.0324273 3.2056e-01 lowCoverage 1.0000e+00 lowCoverage 0.699895 0.761518 -0.04616089 5 0.67828 0.73582 -0.0575396 7.9855e-01 0.09257811 insignificant 1.0000e+00 1.000000 insignificant 5.2997e-01 0.33980447 insignificant 1.0000e+00 1.00000 insignificant 0.0091941 8.2909e-01 lowCoverage 1.000000 lowCoverage 0.725000 0.7073955 0.01926622 5 0.69684 0.697394 -0.0005569 2.4436e-01 7.9968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1515e-01 5.8247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00673374 8.7577e-01 lowCoverage 1.0000e+00 lowCoverage 0.725000 0.761518 -0.01639113 5 0.69684 0.73582 -0.0389829 6.3163e-01 0.320308 insignificant 1.0000e+00 1 insignificant 6.1754e-01 0.189405 insignificant 1.0000e+00 1 insignificant -0.02996692 5.5865e-01 lowCoverage 1.000000 lowCoverage 0.7073955 0.761518 -0.0350804 5 0.697394 0.73582 -0.038426 7.6647e-01 2.4175e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2488e-01 2.5514e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02323318 5.5589e-01 lowCoverage 1.00000000 lowCoverage chr19 11166370 11167370 149746 SPC24 ENSG00000161888 0.687500 25 2 0.633832 160 5 0.53785 171 6 0.638889 19 2 0.920521 128 4 0.81746 27 2 0.63877 174 4 0.87483 95 6 0.8586873 118 4 0.80714 141 5 0.792085 174 7 0.437523 137 4 0.6486667 155 4 1.00000 2 0 0.7377004 104 4 0.561026 77 4 0.836601 106 4 0.58810 29 3 0.741537 241 6 0.858333 37 5 0.61836 56 6 0.583333 11 0 0.58114 48 4 0.749747 40 3 0.678571 13 0 0.837172 176 6 0.855829 60 7 0.795199 61 5 0.70843 129 5 0.8967435 177 6 0.868651 256 7 0.835354 55 6 0.0485763 276 7 0.054412 177 6 0.0509629 122 7 0.0555556 49 2 0.220208 63 6 0.0683022 166 6 0.644444 25 1 0.831250 26 1 0.611111 14 0 0.750000 16 0 0.92143 25 2 0.89062 0.815322 0.806624 0.899732 0.907696 0.937500 0.830119 0.8412946 0.759532 0.869556 0.801597 0.813914 0.8147569 NA 0.7634671 0.766827 0.790645 0.640625 0.9373354 0.903906 0.919299 0.7453027 0.730483 0.827494 0.6562500 0.855654 0.894345 0.868371 0.749662 0.904024 0.94428 0.882008 0.094156 0.1112455 0.0183824 0.0081140 0.205529 0.0932714 0.750000 1.000000 0.7083333 0.778646 0.942708 0 0.813031 0.821296 -2.5404e-02 5 0.66493 0.75175 -0.0868270 9.9761e-01 0.10847734 insignificant 1.0000000 1.00000 insignificant 9.9914e-01 0.16237651 insignificant 1.0000000 1.00000 insignificant -0.01985799 0.6709774 lowCoverage 1 lowCoverage 0.813031 0.0961313 0.71733525 5 0.66493 0.117733 0.5471942 1.9139e-58 9.9996e-01 hypermethylated 2.3923e-56 1.0000000 hypermethylated 1.8434e-12 0.99999765 hypermethylated 1.3167e-10 1.00000 hypermethylated 0.6478500 4.7905e-12 lowCoverage 2.0232e-09 lowCoverage 0.813800 0.773585 -0.02168899 0 0.73881 0.76731 -0.0285027 6.4271e-01 0.07576545 noCoverage 1.0000e+00 1.000000 noCoverage 9.5224e-01 0.42071572 noCoverage 1.0000e+00 1.00000 noCoverage -0.0207941 7.6248e-01 lowCoverage 1.000000 lowCoverage 0.821296 0.0961313 0.72997435 6 0.75175 0.117733 0.6340212 2.5161e-50 1.0000e+00 hypermethylated 4.1935e-48 1.0000e+00 hypermethylated 2.8585e-13 1.0000e+00 hypermethylated 2.3821e-11 1.0000e+00 hypermethylated 0.66770798 8.9011e-11 lowCoverage 2.9670e-08 lowCoverage 0.823420 0.773585 0.02777002 0 0.80751 0.76731 0.0401939 2.8191e-01 0.545212 noCoverage 1.0000e+00 1 noCoverage 6.4436e-01 0.633493 noCoverage 1.0000e+00 1 noCoverage -0.00093613 9.8916e-01 lowCoverage 1.000000 lowCoverage 0.0952941 0.773585 -0.6703249 0 0.093778 0.76731 -0.673533 1.0000e+00 3.5356e-22 noCoverage 1.0000e+00 5.0509e-20 noCoverage 1.0000e+00 2.9824e-07 noCoverage 1.0000e+00 2.4853e-05 noCoverage -0.66864411 5.5497e-05 lowCoverage 0.00882389 lowCoverage chr19 12719994 12720994 149755 ASNA1 ENSG00000198356 0.841856 51 5 0.663859 96 5 0.68071 55 5 0.796154 59 5 0.616667 33 5 0.60563 103 5 0.45833 43 2 0.69048 65 5 0.5970118 45 5 0.58333 22 1 0.757757 158 5 0.722222 17 0 0.6200000 19 2 0.86667 18 3 0.6857143 42 4 0.803571 13 1 NA 0 0 0.79170 68 5 0.737857 35 3 0.759966 56 5 0.66667 15 1 0.816667 14 1 0.67018 45 5 0.625000 45 5 0.685714 13 1 0.758503 70 5 0.697024 41 5 0.732143 11 1 0.64333 38 5 0.7686218 94 5 0.844287 96 5 0.836053 53 5 0.5379630 55 5 0.515784 71 5 0.7617412 157 6 0.7396825 42 4 0.505357 42 2 0.5976984 93 7 0.663105 63 5 0.652484 93 5 0.724090 62 5 0.822222 20 1 0.46979 72 5 0.77259 0.563898 0.705995 0.705632 0.514286 0.577706 0.571429 0.6816249 0.719787 0.549107 0.738558 0.910714 0.7464286 0.853571 0.7483766 0.785285 NA 0.725514 0.7244898 0.566951 0.663690 0.7794611 0.557519 0.549107 0.6173469 0.596088 0.878508 0.723919 0.573810 0.532555 0.75708 0.795579 0.475099 0.4762375 0.7287987 0.6039880 0.457111 0.5048753 0.565781 0.511113 0.5632003 0.801587 0.429378 0 0.686058 0.695327 1.4576e-02 5 0.74562 0.77378 -0.0281648 9.1774e-01 0.56623533 insignificant 1.0000000 1.00000 insignificant 9.3704e-01 0.58492010 insignificant 1.0000000 1.00000 insignificant -0.02976186 0.3640607 lowCoverage 1 lowCoverage 0.686432 0.6543478 0.15144314 5 0.77632 0.642715 0.1336055 5.3399e-04 9.6653e-01 weaklyHypermeth 5.5051e-03 1.0000000 weaklyHypermeth 5.0893e-03 0.98633478 weaklyHypermeth 6.6964e-02 1.00000 weaklyHypermeth 0.0892162 1.2707e-01 lowCoverage 1.0000e+00 lowCoverage 0.686432 0.561290 0.12010023 5 0.77632 0.73904 0.0372821 2.2388e-02 0.75136934 weaklyHypermeth 5.0031e-01 1.000000 insignificant 3.4969e-01 0.53408925 insignificant 1.0000e+00 1.00000 insignificant 0.0325817 6.2177e-01 lowCoverage 1.000000 lowCoverage 0.696060 0.6543478 0.13642847 5 0.80801 0.642715 0.1652909 3.7516e-03 9.9450e-01 weaklyHypermeth 4.0340e-02 1.0000e+00 weaklyHypermeth 2.9005e-03 9.9862e-01 weaklyHypermeth 4.2655e-02 1.0000e+00 weaklyHypermeth 0.11897801 5.2505e-02 lowCoverage 6.4506e-01 lowCoverage 0.696060 0.561290 0.12441562 5 0.80801 0.73904 0.0689676 4.4347e-02 0.985805 weaklyHypermeth 7.6461e-01 1 insignificant 4.1694e-01 0.937274 insignificant 1.0000e+00 1 insignificant 0.06234356 3.5675e-01 lowCoverage 1.000000 lowCoverage 0.6543478 0.561290 -0.0205423 5 0.642715 0.73904 -0.096323 9.6071e-01 4.5069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9752e-01 1.0468e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05663445 4.6623e-01 lowCoverage 1.00000000 lowCoverage chr19 12757584 12758584 149757 HOOK2 ENSG00000095066 0.528169 105 6 0.464301 68 5 0.60910 76 7 0.673509 112 6 0.876543 35 2 0.66696 166 7 0.58286 63 4 0.82854 94 8 0.6509540 41 2 0.69919 68 6 0.776629 151 8 0.487825 39 3 0.7455267 100 7 0.49342 45 3 0.5873016 51 3 0.750000 16 2 0.750000 4 0 0.51505 140 7 0.729668 147 8 0.843249 120 6 0.56904 56 5 0.883333 65 5 0.63371 80 3 0.679012 29 2 0.801016 133 6 0.825925 142 7 0.821499 86 4 0.672222 36 3 0.83141 98 8 0.7568518 117 7 0.820020 137 8 0.710673 162 7 0.3435673 81 5 0.548334 169 8 0.4083333 142 4 0.2119200 162 6 0.369561 50 3 0.2710151 258 8 0.716247 117 3 0.674887 165 7 0.688028 93 6 0.632173 116 2 0.86139 80 6 0.75805 0.615135 0.667763 0.787752 0.893133 0.719351 0.713528 0.8825753 0.726466 0.675586 0.675334 0.763889 0.7459656 0.667420 0.5316358 0.745449 NA 0.342967 0.6255652 0.821742 0.892186 1.0000000 0.819560 0.564815 0.7238432 0.764284 0.649455 0.656019 0.764105 0.623950 0.69924 0.769236 0.336806 0.2871927 0.6189150 0.2970447 0.521516 0.1606756 0.667749 0.519573 0.5535394 0.629926 0.696397 0 0.695917 0.746046 -4.0961e-02 7 0.59591 0.78468 -0.1887723 9.9966e-01 0.07765712 insignificant 1.0000000 1.00000 insignificant 9.9896e-01 0.03035313 weaklyHypometh 1.0000000 1.00000 insignificant -0.08745248 0.0351880 weaklyHypometh 1 insignificant 0.695917 0.3712297 0.36542231 7 0.59591 0.244002 0.3519076 1.3931e-15 1.0000e+00 hypermethylated 4.2217e-14 1.0000000 hypermethylated 1.0023e-05 1.00000000 hypermethylated 2.6378e-04 1.00000 hypermethylated 0.3041512 4.0886e-04 hypermethylated 1.8585e-02 hypermethylated 0.698773 0.584939 0.08812939 6 0.72788 0.75423 -0.0263458 1.4230e-01 0.75393634 insignificant 1.0000e+00 1.000000 insignificant 1.8817e-01 0.42555425 insignificant 1.0000e+00 1.00000 insignificant -0.0516061 3.1298e-01 lowCoverage 1.000000 lowCoverage 0.746046 0.3712297 0.41005417 8 0.78468 0.244002 0.5406799 4.5445e-18 1.0000e+00 hypermethylated 2.0657e-16 1.0000e+00 hypermethylated 1.7022e-07 1.0000e+00 hypermethylated 6.3044e-06 1.0000e+00 hypermethylated 0.39160363 7.3833e-05 hypermethylated 5.2738e-03 hypermethylated 0.745793 0.584939 0.11935108 6 0.78698 0.75423 0.0327580 2.2416e-03 0.904544 weaklyHypermeth 6.7927e-02 1 weaklyHypermeth 9.9683e-02 0.714630 insignificant 1.0000e+00 1 insignificant 0.03584638 4.7569e-01 lowCoverage 1.000000 lowCoverage 0.3733956 0.584939 -0.2638676 6 0.325336 0.75423 -0.428889 1.0000e+00 6.7736e-08 hypomethylated 1.0000e+00 3.0789e-06 hypomethylated 1.0000e+00 1.3542e-04 hypomethylated 1.0000e+00 5.8787e-03 hypomethylated -0.35575725 2.7567e-04 lowCoverage 0.01575752 lowCoverage chr19 12757719 12758719 149758 HOOK2 ENSG00000095066 0.528169 105 6 0.464301 68 5 0.60910 76 7 0.673509 112 6 0.876543 35 2 0.66696 166 7 0.58286 63 4 0.82854 94 8 0.6509540 41 2 0.69919 68 6 0.776629 151 8 0.487825 39 3 0.7455267 100 7 0.49342 45 3 0.5873016 51 3 0.750000 16 2 0.750000 4 0 0.51505 140 7 0.729668 147 8 0.843249 120 6 0.56904 56 5 0.883333 65 5 0.63371 80 3 0.679012 29 2 0.801016 133 6 0.825925 142 7 0.821499 86 4 0.672222 36 3 0.83141 98 8 0.7568518 117 7 0.820020 137 8 0.710673 162 7 0.3435673 81 5 0.548334 169 8 0.4083333 142 4 0.2119200 162 6 0.369561 50 3 0.2710151 258 8 0.716247 117 3 0.674887 165 7 0.688028 93 6 0.632173 116 2 0.86139 80 6 0.75805 0.615135 0.667763 0.787752 0.893133 0.719351 0.713528 0.8825753 0.726466 0.675586 0.675334 0.763889 0.7459656 0.667420 0.5316358 0.745449 NA 0.342967 0.6255652 0.821742 0.892186 1.0000000 0.819560 0.564815 0.7238432 0.764284 0.649455 0.656019 0.764105 0.623950 0.69924 0.769236 0.336806 0.2871927 0.6189150 0.2970447 0.521516 0.1606756 0.667749 0.519573 0.5535394 0.629926 0.696397 0 0.695917 0.746046 -4.0961e-02 7 0.59591 0.78468 -0.1887723 9.9966e-01 0.07765712 insignificant 1.0000000 1.00000 insignificant 9.9896e-01 0.03035313 weaklyHypometh 1.0000000 1.00000 insignificant -0.08745248 0.0351880 weaklyHypometh 1 insignificant 0.695917 0.3712297 0.36542231 7 0.59591 0.244002 0.3519076 1.3931e-15 1.0000e+00 hypermethylated 4.2217e-14 1.0000000 hypermethylated 1.0023e-05 1.00000000 hypermethylated 2.6378e-04 1.00000 hypermethylated 0.3041512 4.0886e-04 hypermethylated 1.8585e-02 hypermethylated 0.698773 0.584939 0.08812939 6 0.72788 0.75423 -0.0263458 1.4230e-01 0.75393634 insignificant 1.0000e+00 1.000000 insignificant 1.8817e-01 0.42555425 insignificant 1.0000e+00 1.00000 insignificant -0.0516061 3.1298e-01 lowCoverage 1.000000 lowCoverage 0.746046 0.3712297 0.41005417 8 0.78468 0.244002 0.5406799 4.5445e-18 1.0000e+00 hypermethylated 2.0657e-16 1.0000e+00 hypermethylated 1.7022e-07 1.0000e+00 hypermethylated 6.3044e-06 1.0000e+00 hypermethylated 0.39160363 7.3833e-05 hypermethylated 5.2738e-03 hypermethylated 0.745793 0.584939 0.11935108 6 0.78698 0.75423 0.0327580 2.2416e-03 0.904544 weaklyHypermeth 6.7927e-02 1 weaklyHypermeth 9.9683e-02 0.714630 insignificant 1.0000e+00 1 insignificant 0.03584638 4.7569e-01 lowCoverage 1.000000 lowCoverage 0.3733956 0.584939 -0.2638676 6 0.325336 0.75423 -0.428889 1.0000e+00 6.7736e-08 hypomethylated 1.0000e+00 3.0789e-06 hypomethylated 1.0000e+00 1.3542e-04 hypomethylated 1.0000e+00 5.8787e-03 hypomethylated -0.35575725 2.7567e-04 lowCoverage 0.01575752 lowCoverage chr19 12757999 12758999 149759 HOOK2 ENSG00000095066 0.528169 105 6 0.464301 68 5 0.60910 76 7 0.673509 112 6 0.876543 35 2 0.66696 166 7 0.58286 63 4 0.82854 94 8 0.6509540 41 2 0.69919 68 6 0.776629 151 8 0.487825 39 3 0.7455267 100 7 0.49342 45 3 0.5873016 51 3 0.750000 16 2 0.750000 4 0 0.51505 140 7 0.729668 147 8 0.843249 120 6 0.56904 56 5 0.883333 65 5 0.63371 80 3 0.679012 29 2 0.801016 133 6 0.825925 142 7 0.821499 86 4 0.672222 36 3 0.83141 98 8 0.7568518 117 7 0.820020 137 8 0.710673 162 7 0.3435673 81 5 0.548334 169 8 0.4083333 142 4 0.2119200 162 6 0.369561 50 3 0.2710151 258 8 0.716247 117 3 0.674887 165 7 0.688028 93 6 0.632173 116 2 0.86139 80 6 0.75805 0.615135 0.667763 0.787752 0.893133 0.719351 0.713528 0.8825753 0.726466 0.675586 0.675334 0.763889 0.7459656 0.667420 0.5316358 0.745449 NA 0.342967 0.6255652 0.821742 0.892186 1.0000000 0.819560 0.564815 0.7238432 0.764284 0.649455 0.656019 0.764105 0.623950 0.69924 0.769236 0.336806 0.2871927 0.6189150 0.2970447 0.521516 0.1606756 0.667749 0.519573 0.5535394 0.629926 0.696397 0 0.695917 0.746046 -4.0961e-02 7 0.59591 0.78468 -0.1887723 9.9966e-01 0.07765712 insignificant 1.0000000 1.00000 insignificant 9.9896e-01 0.03035313 weaklyHypometh 1.0000000 1.00000 insignificant -0.08745248 0.0351880 weaklyHypometh 1 insignificant 0.695917 0.3712297 0.36542231 7 0.59591 0.244002 0.3519076 1.3931e-15 1.0000e+00 hypermethylated 4.2217e-14 1.0000000 hypermethylated 1.0023e-05 1.00000000 hypermethylated 2.6378e-04 1.00000 hypermethylated 0.3041512 4.0886e-04 hypermethylated 1.8585e-02 hypermethylated 0.698773 0.584939 0.08812939 6 0.72788 0.75423 -0.0263458 1.4230e-01 0.75393634 insignificant 1.0000e+00 1.000000 insignificant 1.8817e-01 0.42555425 insignificant 1.0000e+00 1.00000 insignificant -0.0516061 3.1298e-01 lowCoverage 1.000000 lowCoverage 0.746046 0.3712297 0.41005417 8 0.78468 0.244002 0.5406799 4.5445e-18 1.0000e+00 hypermethylated 2.0657e-16 1.0000e+00 hypermethylated 1.7022e-07 1.0000e+00 hypermethylated 6.3044e-06 1.0000e+00 hypermethylated 0.39160363 7.3833e-05 hypermethylated 5.2738e-03 hypermethylated 0.745793 0.584939 0.11935108 6 0.78698 0.75423 0.0327580 2.2416e-03 0.904544 weaklyHypermeth 6.7927e-02 1 weaklyHypermeth 9.9683e-02 0.714630 insignificant 1.0000e+00 1 insignificant 0.03584638 4.7569e-01 lowCoverage 1.000000 lowCoverage 0.3733956 0.584939 -0.2638676 6 0.325336 0.75423 -0.428889 1.0000e+00 6.7736e-08 hypomethylated 1.0000e+00 3.0789e-06 hypomethylated 1.0000e+00 1.3542e-04 hypomethylated 1.0000e+00 5.8787e-03 hypomethylated -0.35575725 2.7567e-04 lowCoverage 0.01575752 lowCoverage chr19 12959363 12960363 149765 DAND5 ENSG00000179284 0.834286 51 5 0.734448 80 5 0.90909 28 2 0.844006 103 5 0.588889 24 2 0.80261 86 5 0.81619 47 5 0.85111 66 5 0.9000000 22 2 1.00000 11 0 0.889163 103 5 0.533333 15 0 0.8125000 16 2 0.94286 23 2 0.9230769 29 2 0.800000 19 3 1.000000 1 0 0.91026 52 4 0.878571 77 5 0.850000 43 5 0.85641 34 2 0.800000 20 2 0.77328 75 5 0.966667 17 2 0.768542 198 5 0.844016 94 5 0.675000 31 2 0.800000 5 0 0.75571 70 4 0.8496611 148 5 0.909722 134 5 0.830611 84 5 0.8515810 81 5 0.989474 41 2 0.6059809 141 5 0.9714286 34 2 0.870000 34 2 0.6425455 133 5 0.724762 38 5 0.895455 64 5 0.760920 76 5 0.795604 34 2 0.86899 72 5 0.81593 0.695973 0.829154 0.801296 0.667625 0.765972 0.705172 0.8103448 0.814655 1.000000 0.813700 0.419540 0.8349133 0.894089 0.8580902 0.620690 NA 0.929487 0.8228654 0.817529 0.733422 0.8252725 0.712962 0.936782 0.7969594 0.781069 0.729583 0.637931 0.732143 0.798226 0.88906 0.869481 0.794790 0.9809437 0.5390200 0.9482759 0.901437 0.5445455 0.673317 0.885972 0.7046406 0.764210 0.819999 0 0.818080 0.813187 -2.0617e-03 5 0.83971 0.83465 0.0050607 5.8523e-01 0.65301384 insignificant 1.0000000 1.00000 insignificant 3.1869e-01 0.87591058 insignificant 1.0000000 1.00000 insignificant 0.02188386 0.5254306 lowCoverage 1 lowCoverage 0.818080 0.6918103 0.10787013 5 0.83971 0.732828 0.1068820 2.8751e-04 5.0653e-02 weaklyHypermeth 3.0586e-03 1.0000000 weaklyHypermeth 5.5514e-01 0.04326990 inconclusive 1.0000e+00 1.00000 insignificant 0.0191843 7.9629e-01 lowCoverage 1.0000e+00 lowCoverage 0.818080 0.809859 0.01854186 5 0.83971 0.82088 0.0188256 2.2617e-01 0.77627886 insignificant 1.0000e+00 1.000000 insignificant 5.0382e-02 0.94849881 insignificant 1.0000e+00 1.00000 insignificant 0.0318740 4.5899e-01 lowCoverage 1.000000 lowCoverage 0.813187 0.6918103 0.11657852 5 0.83465 0.732828 0.1018213 4.7886e-03 3.1721e-02 weaklyHypermeth 4.9367e-02 1.0000e+00 weaklyHypermeth 7.4086e-01 3.6669e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.00269961 9.7044e-01 lowCoverage 1.0000e+00 lowCoverage 0.813187 0.809859 0.01774001 5 0.83465 0.82088 0.0137649 3.9508e-01 0.737063 insignificant 1.0000e+00 1 insignificant 2.1673e-01 0.927207 insignificant 1.0000e+00 1 insignificant 0.00999012 8.0377e-01 lowCoverage 1.000000 lowCoverage 0.6918103 0.809859 -0.0908490 5 0.732828 0.82088 -0.088056 1.2118e-01 1.1682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2600e-02 9.4422e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01268973 8.6827e-01 lowCoverage 1.00000000 lowCoverage chr19 12977903 12978903 149766 NFIX ENSG00000008441 0.871362 336 13 0.772206 213 11 0.82876 267 13 0.826112 414 15 0.674283 183 10 0.64690 359 12 0.79868 185 13 0.80936 298 13 0.7870167 268 12 0.86611 324 12 0.814883 425 15 0.910682 152 9 0.8396721 329 11 0.78070 161 7 0.6808057 224 10 0.905789 66 5 0.651948 49 5 0.87566 455 13 0.832790 307 11 0.558325 326 12 0.74954 208 12 0.752726 266 14 0.77243 234 15 0.650718 267 11 0.879484 256 14 0.857950 366 14 0.750277 262 13 0.584877 149 11 0.77921 253 11 0.7159208 360 14 0.888582 360 14 0.898137 413 13 0.2857788 401 13 0.406396 310 15 0.2378527 285 11 0.6328283 135 8 0.322092 270 16 0.3982488 460 15 0.861004 401 13 0.853051 463 15 0.759086 372 13 0.865817 376 14 0.72502 353 14 0.83224 0.729173 0.823275 0.822017 0.735047 0.713855 0.844029 0.8575311 0.822659 0.888897 0.834313 0.838202 0.7823707 0.829453 0.7540670 0.847941 0.698357 0.833965 0.8871666 0.658777 0.766067 0.8157485 0.798339 0.781790 0.8959109 0.871240 0.803146 0.780007 0.876942 0.775618 0.86043 0.879561 0.181980 0.2231003 0.0812715 0.5867425 0.257207 0.3161231 0.783937 0.835282 0.7524192 0.814371 0.650016 8 0.810897 0.826356 -1.6139e-02 12 0.77512 0.74475 0.0303747 4.4177e-01 0.38134001 insignificant 1.0000000 1.00000 insignificant 5.1625e-01 0.38402274 insignificant 1.0000000 1.00000 insignificant 0.01328110 0.7092038 insignificant 1 insignificant 0.810897 0.2842558 0.52829460 12 0.77512 0.342765 0.4323587 4.1913e-76 1.0000e+00 hypermethylated 1.0478e-73 1.0000000 hypermethylated 5.8943e-19 0.99999997 hypermethylated 8.4204e-17 1.00000 hypermethylated 0.4060698 3.9717e-04 hypermethylated 1.8585e-02 hypermethylated 0.811586 0.800000 0.02561168 12 0.80571 0.77884 0.0268695 2.4493e-01 0.70516800 insignificant 1.0000e+00 1.000000 insignificant 4.1909e-01 0.79840899 insignificant 1.0000e+00 1.00000 insignificant -0.0261937 4.9063e-01 insignificant 1.000000 insignificant 0.826356 0.2842558 0.53640588 14 0.74475 0.342765 0.4019839 3.1451e-56 1.0000e+00 hypermethylated 7.8627e-54 1.0000e+00 hypermethylated 4.7916e-16 9.9996e-01 hypermethylated 9.5833e-14 1.0000e+00 hypermethylated 0.39278867 3.4260e-04 hypermethylated 1.7397e-02 hypermethylated 0.827332 0.800000 0.04054872 13 0.79130 0.77884 0.0124535 4.7900e-02 0.706054 weaklyHypermeth 8.1187e-01 1 insignificant 9.9151e-02 0.697944 insignificant 1.0000e+00 1 insignificant -0.03947480 3.5111e-01 insignificant 1.000000 insignificant 0.2845616 0.800000 -0.5251257 14 0.364188 0.77884 -0.414654 1.0000e+00 1.8004e-30 hypomethylated 1.0000e+00 4.5009e-28 hypomethylated 1.0000e+00 2.7484e-11 hypomethylated 1.0000e+00 5.4968e-09 hypomethylated -0.43226347 2.1260e-04 hypomethylated 0.01575752 hypomethylated chr19 12978199 12979199 149767 NFIX ENSG00000008441 0.816827 364 13 0.688454 231 12 0.73871 287 13 0.740640 429 15 0.615012 190 10 0.57268 380 13 0.72783 216 13 0.70345 301 14 0.7247750 280 11 0.75963 337 12 0.754973 445 15 0.821793 157 9 0.6403806 342 11 0.69501 164 7 0.6172289 242 11 0.810897 82 7 0.617143 53 6 0.81122 482 14 0.796827 329 10 0.506395 383 13 0.68970 204 12 0.744740 263 14 0.74030 291 16 0.603365 265 11 0.737733 260 14 0.790636 372 14 0.620601 280 14 0.651054 157 12 0.71826 262 11 0.6710904 381 14 0.747579 357 14 0.821391 466 13 0.2227954 428 13 0.348591 335 15 0.1518107 345 13 0.5529882 151 9 0.234210 290 17 0.3007711 478 16 0.731561 451 14 0.789240 545 15 0.639457 428 13 0.805522 404 13 0.60745 389 14 0.81642 0.707638 0.820696 0.788848 0.713333 0.705632 0.821353 0.8350629 0.807571 0.883558 0.815608 0.807706 0.7404305 0.768873 0.7303637 0.826650 0.680371 0.808508 0.8837673 0.640002 0.747407 0.7829458 0.785736 0.775031 0.8696371 0.850609 0.800062 0.782965 0.870797 0.741625 0.82481 0.868977 0.167829 0.2014698 0.0613485 0.5571562 0.256140 0.2932344 0.764514 0.808175 0.7169809 0.803490 0.640451 9 0.776743 0.799775 -2.2543e-02 12 0.69603 0.60054 0.0954827 8.5615e-01 0.31265584 insignificant 1.0000000 1.00000 insignificant 8.5667e-01 0.42908370 insignificant 1.0000000 1.00000 insignificant -0.00337686 0.9033997 insignificant 1 insignificant 0.776704 0.2454321 0.53140600 12 0.68155 0.236906 0.4446456 2.6907e-78 1.0000e+00 hypermethylated 8.9690e-76 1.0000000 hypermethylated 3.1301e-21 1.00000000 hypermethylated 6.2603e-19 1.00000 hypermethylated 0.4061327 4.5323e-04 hypermethylated 1.9706e-02 hypermethylated 0.777270 0.750564 0.03248682 12 0.68562 0.62712 0.0585080 1.1251e-01 0.94292422 insignificant 1.0000e+00 1.000000 insignificant 4.1759e-01 0.93477451 insignificant 1.0000e+00 1.00000 insignificant -0.0066516 8.8532e-01 insignificant 1.000000 insignificant 0.800000 0.2454321 0.54820205 14 0.62914 0.236906 0.3922351 5.8251e-59 1.0000e+00 hypermethylated 1.9417e-56 1.0000e+00 hypermethylated 1.5289e-18 1.0000e+00 hypermethylated 3.8221e-16 1.0000e+00 hypermethylated 0.40950956 4.5897e-04 hypermethylated 1.9124e-02 hypermethylated 0.801127 0.750564 0.05398619 13 0.69537 0.62712 0.0682498 7.8707e-03 0.961650 weaklyHypermeth 1.9197e-01 1 insignificant 1.0352e-01 0.962355 insignificant 1.0000e+00 1 insignificant -0.00327475 9.4297e-01 insignificant 1.000000 insignificant 0.2459179 0.750564 -0.5151099 14 0.261844 0.62712 -0.365273 1.0000e+00 1.8462e-31 hypomethylated 1.0000e+00 6.1540e-29 hypomethylated 1.0000e+00 1.5600e-12 hypomethylated 1.0000e+00 5.2002e-10 hypomethylated -0.41278430 2.7871e-04 hypomethylated 0.01575752 hypomethylated chr19 13008186 13009186 149769 NFIX ENSG00000008441 0.698171 110 6 0.621721 461 8 0.52756 281 8 0.713156 168 6 0.479183 186 8 0.72540 292 6 0.80239 332 8 0.61310 259 8 0.6622729 216 8 0.56499 253 8 0.789945 439 8 0.526828 172 8 0.7099296 339 8 0.64275 138 6 0.6097930 334 8 0.630300 135 8 0.496324 50 2 0.65884 182 5 0.691878 488 8 0.478851 275 8 0.83567 155 8 0.495455 119 6 0.52619 171 8 0.358318 130 8 0.542125 62 2 0.729674 502 8 0.534325 282 8 0.774250 93 8 0.69247 555 8 0.6479391 549 8 0.666196 569 7 0.780581 266 8 0.2279251 383 8 0.197253 261 8 0.2505952 306 4 0.6388889 16 2 0.214280 282 8 0.5697964 405 8 0.676662 188 6 0.595307 179 8 0.729640 136 2 0.707673 123 6 0.65026 129 6 0.78860 0.685273 0.521370 0.744158 0.563455 0.726583 0.768802 0.6727055 0.656138 0.697534 0.807847 0.712897 0.8032857 0.631616 0.7018348 0.671215 NA 0.696186 0.7476589 0.419779 0.811043 0.6536092 0.658643 0.344451 0.6702258 0.806231 0.613275 0.812035 0.777761 0.754748 0.75634 0.816475 0.199725 0.1683877 0.4174393 0.4675764 0.153262 0.6188007 0.731519 0.716156 0.5934051 0.646303 0.547910 2 0.686888 0.721112 -4.7409e-02 8 0.57265 0.60303 -0.0303805 9.8149e-01 0.14916000 insignificant 1.0000000 1.00000 insignificant 8.9621e-01 0.47589775 insignificant 1.0000000 1.00000 insignificant 0.00023611 0.9959864 insignificant 1 insignificant 0.687035 0.3387780 0.35313575 8 0.58073 0.288496 0.2922307 9.7902e-24 9.9980e-01 hypermethylated 4.4501e-22 1.0000000 hypermethylated 3.9083e-10 0.99926675 hypermethylated 1.8611e-08 1.00000 hypermethylated 0.2823792 1.6422e-02 weaklyHypermeth 2.8366e-01 insignificant 0.687035 0.638411 0.04866119 6 0.58073 0.56551 0.0152154 2.2347e-01 0.60393779 insignificant 1.0000e+00 1.000000 insignificant 8.7492e-01 0.18989620 insignificant 1.0000e+00 1.00000 insignificant -0.0397386 2.3652e-01 insignificant 1.000000 insignificant 0.721288 0.3387780 0.37319452 8 0.60337 0.288496 0.3148757 2.2725e-19 9.9995e-01 hypermethylated 1.3368e-17 1.0000e+00 hypermethylated 9.9052e-08 9.9959e-01 hypermethylated 4.3066e-06 1.0000e+00 hypermethylated 0.28214308 1.5548e-02 weaklyHypermeth 2.6807e-01 insignificant 0.721288 0.638411 0.10115213 6 0.60337 0.56551 0.0378605 3.5585e-02 0.889326 weaklyHypermeth 6.7142e-01 1 insignificant 7.2756e-01 0.404043 insignificant 1.0000e+00 1 insignificant -0.03997470 4.0968e-01 insignificant 1.000000 insignificant 0.3387780 0.638411 -0.2830375 6 0.288496 0.56551 -0.277015 1.0000e+00 1.1437e-06 hypomethylated 1.0000e+00 4.2359e-05 hypomethylated 1.0000e+00 4.6617e-05 hypomethylated 1.0000e+00 2.5899e-03 hypomethylated -0.32211779 9.4366e-03 weaklyHypometh 0.20970160 insignificant chr19 13026810 13027810 149776 NFIX ENSG00000008441 0.179654 205 6 0.108993 160 8 0.16969 149 8 0.193665 201 7 0.055556 100 8 0.23320 279 9 0.17113 131 8 0.28298 146 8 0.0099206 123 8 0.13005 92 6 0.059677 182 8 0.049583 71 4 0.0052632 101 6 0.00000 11 2 0.0056818 91 6 0.000000 36 4 0.015625 42 4 0.20000 186 8 0.189815 128 7 0.090183 229 9 0.15762 94 8 0.151072 159 6 0.15832 172 10 0.000000 110 9 0.078226 170 8 0.083956 228 9 0.038235 127 8 0.054701 104 8 0.22101 102 6 0.0069178 199 9 0.148214 205 9 0.158974 222 7 0.0000000 145 8 0.000000 152 8 0.3333333 48 3 0.1111111 251 5 0.054960 72 8 0.0000000 206 9 0.158095 293 10 0.152098 247 10 0.127674 152 8 0.250126 267 7 0.09170 306 8 0.00000 0.022862 0.028081 0.016496 0.000000 0.030201 0.016742 0.0063411 0.016738 0.022675 0.020004 0.032569 0.0077257 0.010161 0.0097998 0.000000 0.032339 0.019266 0.0040138 0.015002 0.021560 0.0055529 0.043077 0.000000 0.0047351 0.011193 0.027829 0.014679 0.025429 0.010923 0.01629 0.000000 0.000000 0.0000000 0.2155963 0.0000000 0.047794 0.0000000 0.040269 0.000000 0.0068807 0.019819 0.030403 4 0.034949 0.029692 8.6562e-03 6 0.13353 0.11996 0.0135780 2.8090e-02 0.82935413 weaklyHypermeth 1.0000000 1.00000 insignificant 2.1960e-01 0.84341544 insignificant 1.0000000 1.00000 insignificant 0.00276189 0.9238073 insignificant 1 insignificant 0.034949 0.0091533 0.02248838 6 0.13353 0.053761 0.0797727 1.0588e-02 9.9999e-01 weaklyHypermeth 9.0499e-02 1.0000000 weaklyHypermeth 8.9321e-02 0.99992086 insignificant 7.9045e-01 1.00000 insignificant 0.0242989 6.8299e-01 insignificant 1.0000e+00 insignificant 0.034949 0.056917 -0.00473598 6 0.13353 0.16920 -0.0356695 4.8743e-01 0.34527001 insignificant 1.0000e+00 1.000000 insignificant 7.0040e-01 0.58069602 insignificant 1.0000e+00 1.00000 insignificant -0.0484056 1.7619e-01 insignificant 1.000000 insignificant 0.029692 0.0091533 0.01396919 8 0.11996 0.053761 0.0661946 1.5798e-01 9.9929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0527e-01 9.9824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02153697 7.1741e-01 insignificant 1.0000e+00 insignificant 0.029692 0.056917 -0.01523632 6 0.11996 0.16920 -0.0492476 8.9360e-01 0.060592 insignificant 1.0000e+00 1 insignificant 9.0550e-01 0.321688 insignificant 1.0000e+00 1 insignificant -0.05116753 1.5802e-01 insignificant 1.000000 insignificant 0.0091533 0.056917 -0.0255816 7 0.053761 0.16920 -0.115442 1.0000e+00 2.1782e-03 weaklyHypometh 1.0000e+00 3.4088e-02 weaklyHypometh 1.0000e+00 3.6125e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07270450 2.5904e-01 insignificant 1.00000000 insignificant chr19 13041131 13042131 149782 NFIX ENSG00000008441 0.843839 216 5 0.761238 117 5 0.73803 119 7 0.849845 194 5 0.807937 68 5 0.84712 300 7 0.72099 129 5 0.78515 90 7 0.8260371 92 7 0.88265 80 5 0.878283 194 7 0.915506 67 4 0.7718349 118 7 0.96429 26 1 0.8620628 118 5 0.867582 38 2 0.518357 28 2 0.91841 149 5 0.893449 165 7 0.796048 265 7 0.75246 74 7 0.640625 56 4 0.85855 202 7 0.939815 75 5 0.892857 29 2 0.919830 161 7 0.803355 99 7 0.820363 90 5 0.86137 117 7 0.7955363 147 7 0.774890 123 7 0.882102 306 7 0.6985102 161 7 0.670767 183 7 0.5801718 134 5 0.9353741 46 5 0.667122 106 6 0.8828977 190 7 0.821330 222 5 0.896622 270 6 0.795106 161 5 0.702950 234 5 0.43752 237 5 0.84210 0.840931 0.776261 0.860908 0.869547 0.827212 0.831281 0.8566868 0.839289 0.903628 0.886832 0.918550 0.9132496 0.873310 0.8417497 0.896215 0.793624 0.901088 0.9246949 0.872623 0.788294 0.7675090 0.866228 0.911131 0.9395944 0.927606 0.859468 0.880231 0.838051 0.817341 0.79512 0.894440 0.636869 0.5361319 0.4538538 0.8543714 0.578490 0.8956916 0.818798 0.875131 0.7941169 0.768921 0.456396 2 0.866926 0.853279 4.9017e-03 7 0.83100 0.83774 -0.0067380 2.1397e-01 0.53352196 insignificant 1.0000000 1.00000 insignificant 5.6001e-01 0.72429442 insignificant 1.0000000 1.00000 insignificant -0.00604682 0.8519354 insignificant 1 insignificant 0.866926 0.6073171 0.25875413 7 0.83100 0.723334 0.1076700 2.4646e-06 3.5824e-01 hypermethylated 3.5718e-05 1.0000000 hypermethylated 1.0449e-02 0.33979510 weaklyHypermeth 1.1874e-01 1.00000 insignificant 0.0832924 2.1391e-01 insignificant 1.0000e+00 insignificant 0.866926 0.726625 0.13421710 5 0.83100 0.74488 0.0861209 5.2825e-06 0.99966547 weaklyHypermeth 3.1074e-04 1.000000 weaklyHypermeth 5.7771e-04 0.99480167 weaklyHypermeth 3.7873e-02 1.00000 weaklyHypermeth 0.0917263 3.2040e-01 insignificant 1.000000 insignificant 0.853279 0.6073171 0.24807637 7 0.83774 0.723334 0.1144079 2.9845e-04 3.4123e-01 hypermethylated 3.8262e-03 1.0000e+00 hypermethylated 3.9237e-02 3.2294e-01 weaklyHypermeth 4.0038e-01 1.0000e+00 insignificant 0.08933922 1.8993e-01 insignificant 1.0000e+00 insignificant 0.853279 0.726625 0.12568163 5 0.83774 0.74488 0.0928589 2.0063e-03 0.999690 weaklyHypermeth 6.6878e-02 1 weaklyHypermeth 2.3340e-02 0.993378 weaklyHypermeth 7.6288e-01 1 insignificant 0.09777314 2.9494e-01 insignificant 1.000000 insignificant 0.6073171 0.726625 -0.1348071 5 0.723334 0.74488 -0.021549 7.9786e-02 4.4738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1888e-01 6.9113e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00843392 9.3340e-01 insignificant 1.00000000 insignificant chr19 13198059 13199059 149790 ENSG00000213253 0.644123 443 9 0.675620 360 10 0.51401 180 9 0.852645 349 8 0.758486 118 9 0.75497 600 9 0.79229 239 10 0.83022 158 9 0.6841315 153 9 0.59955 166 8 0.743996 491 10 0.784529 98 6 0.8888228 127 9 0.81405 92 8 0.6570065 188 8 0.608333 42 4 0.596376 4910 4 0.70732 345 9 0.707050 314 9 0.737674 441 9 0.58220 104 6 0.657517 156 6 0.74771 314 10 0.618182 134 6 0.669613 253 6 0.742766 356 8 0.581163 122 8 0.641189 84 7 0.71245 282 9 0.6671754 274 9 0.595393 380 9 0.707330 467 9 0.6953500 259 8 0.626301 335 9 0.5818713 447 7 0.8148148 32 3 0.505222 254 8 0.6959726 449 8 0.761464 448 9 0.835745 494 10 0.823841 397 8 0.741218 285 9 0.86181 482 9 0.85856 0.843834 0.749115 0.898733 0.821492 0.873708 0.876131 0.9056557 0.798664 0.821984 0.823662 0.821169 0.9233774 0.908089 0.8600189 0.792283 0.827510 0.834554 0.8427307 0.900606 0.855018 0.8650119 0.909523 0.850821 0.8457680 0.874316 0.836125 0.841109 0.826975 0.826829 0.81637 0.857077 0.830770 0.7231423 0.7533580 0.8914228 0.793134 0.8229324 0.848593 0.875590 0.9265041 0.893740 0.923935 5 0.831329 0.844444 -1.1215e-02 8 0.76943 0.66394 0.1054907 3.6689e-01 0.07880918 insignificant 1.0000000 1.00000 insignificant 7.4421e-01 0.71692333 insignificant 1.0000000 1.00000 insignificant 0.05733578 0.0459161 weaklyHypermeth 1 insignificant 0.831244 0.7950450 0.03923167 8 0.73096 0.576756 0.1542086 7.7253e-02 8.0635e-01 insignificant 5.9426e-01 1.0000000 insignificant 5.6937e-01 0.95390652 insignificant 1.0000e+00 1.00000 insignificant 0.0643050 2.2592e-01 insignificant 1.0000e+00 insignificant 0.832839 0.843780 -0.00865033 9 0.78286 0.82583 -0.0429656 6.3423e-01 0.00630872 weaklyHypometh 1.0000e+00 0.630872 insignificant 9.7066e-01 0.14262250 insignificant 1.0000e+00 1.00000 insignificant -0.0872549 1.6685e-02 weaklyHypometh 0.683381 insignificant 0.844733 0.7954930 0.05426372 8 0.71926 0.624819 0.0944444 2.3460e-01 8.9185e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0063e-01 8.2752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00696921 8.8645e-01 insignificant 1.0000e+00 insignificant 0.851468 0.843780 -0.01429480 8 0.75200 0.82583 -0.0738233 8.8679e-01 0.022642 weaklyHypometh 1.0000e+00 1 insignificant 9.5428e-01 0.048436 weaklyHypometh 1.0000e+00 1 insignificant -0.14459067 7.5519e-04 weaklyHypometh 0.228552 insignificant 0.7988669 0.843780 -0.0565969 8 0.727560 0.82583 -0.098268 9.7766e-01 3.8449e-02 weaklyHypometh 1.0000e+00 3.9318e-01 insignificant 9.8733e-01 1.1076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.15155987 1.6846e-02 weaklyHypometh 0.33030700 insignificant chr19 13808338 13809338 149803 MIR23A ENSG00000207980 0.906233 142 7 0.751633 128 7 0.67835 135 7 0.884025 153 5 0.806903 76 7 0.84555 206 8 0.81274 102 7 0.80350 106 7 0.8262197 163 7 0.90887 119 7 0.827179 152 7 0.760374 111 6 0.9109883 141 7 0.84848 42 4 0.7411431 137 7 0.900595 60 6 0.571429 19 2 0.62258 132 5 0.955357 93 7 0.904672 140 7 0.80170 38 5 0.793732 65 4 0.76836 77 6 0.848268 66 6 0.567100 51 4 0.874347 152 7 0.834427 85 7 0.869048 37 4 0.82228 72 7 0.8636436 131 7 0.879386 145 6 0.903387 225 8 0.0927630 145 7 0.123377 77 7 0.1666667 133 6 0.1219618 101 5 0.179873 105 5 0.2196223 175 8 0.834375 124 5 0.919792 109 7 0.764701 109 4 0.784869 127 7 0.88286 85 5 0.87620 0.739909 0.729803 0.884520 0.819283 0.854180 0.838509 0.8500227 0.821844 0.922079 0.834692 0.834425 0.9076274 0.871499 0.8268882 0.911493 0.372222 0.696732 0.9841270 0.884961 0.871759 0.8052461 0.769784 0.844234 0.8407407 0.879845 0.767123 0.937963 0.902315 0.909501 0.93526 0.908926 0.142307 0.2199495 0.2611111 0.1148148 0.310785 0.2653804 0.872847 0.945139 0.8098695 0.802151 0.909954 3 0.851506 0.862642 -2.2455e-02 7 0.84192 0.85582 -0.0139032 8.4193e-01 0.18293879 insignificant 1.0000000 1.00000 insignificant 6.3946e-01 0.17232997 insignificant 1.0000000 1.00000 insignificant -0.00546465 0.8743428 insignificant 1 insignificant 0.851506 0.2051630 0.64954602 7 0.84192 0.160174 0.6817444 5.2366e-64 1.0000e+00 hypermethylated 7.4809e-62 1.0000000 hypermethylated 6.1957e-17 1.00000000 hypermethylated 6.1957e-15 1.00000 hypermethylated 0.6626310 3.0680e-15 hypermethylated 3.0680e-12 hypermethylated 0.851506 0.880866 -0.01394045 4 0.84192 0.83380 0.0081181 3.1886e-01 0.05739114 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.4629e-01 0.05114583 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0239785 5.3101e-01 insignificant 1.000000 insignificant 0.862642 0.2051630 0.67273417 7 0.85582 0.160174 0.6956476 5.6127e-49 1.0000e+00 hypermethylated 8.0182e-47 1.0000e+00 hypermethylated 1.2669e-14 1.0000e+00 hypermethylated 1.4077e-12 1.0000e+00 hypermethylated 0.66809568 5.3600e-13 hypermethylated 2.6800e-10 hypermethylated 0.862642 0.880866 0.01926827 4 0.85582 0.83380 0.0220213 1.6423e-01 0.371819 lowCoverage 1.0000e+00 1 lowCoverage 5.2984e-01 0.238914 lowCoverage 1.0000e+00 1 lowCoverage -0.01851385 6.4257e-01 insignificant 1.000000 insignificant 0.2051630 0.880866 -0.6225345 5 0.160174 0.83380 -0.673626 1.0000e+00 1.9729e-20 hypomethylated 1.0000e+00 2.4662e-18 hypomethylated 1.0000e+00 4.0789e-11 hypomethylated 1.0000e+00 6.7981e-09 hypomethylated -0.68660952 1.8044e-07 hypomethylated 0.00018044 hypomethylated chr19 13811367 13812367 149804 ENSG00000205463 0.557143 100 5 0.244690 75 2 0.51350 75 5 0.584596 140 5 0.634921 29 2 0.76381 163 5 0.76389 23 2 0.47801 87 5 0.3601190 46 2 0.80952 59 5 0.794203 167 7 0.216667 24 2 0.7194730 95 5 0.75549 70 5 0.7081044 69 5 0.800000 31 5 NA 0 0 0.26807 273 5 0.551259 162 5 0.850837 129 5 0.41706 33 4 0.269903 111 4 0.90625 38 5 0.541545 45 2 0.617808 214 5 0.851929 132 5 0.531868 82 5 0.641667 34 2 0.77859 119 5 0.8556163 129 2 0.628804 135 5 0.687294 154 5 0.0000000 103 5 0.000000 164 5 0.0333333 133 4 0.0000000 97 3 0.142773 92 5 0.1666667 180 5 0.579167 58 5 0.194372 98 5 0.794790 94 5 0.413363 119 4 0.22263 92 4 0.62152 0.473234 0.542296 0.758592 0.663957 0.788919 0.889566 0.6260028 0.627287 0.767554 0.821587 0.275407 0.8403492 0.655410 0.6169676 0.839024 NA 0.344664 0.7945431 0.805177 0.433508 0.3885390 0.854268 0.480865 0.6525293 0.722709 0.328866 0.677846 0.701170 0.912005 0.67093 0.719627 0.000000 0.0000000 0.0609756 0.0000000 0.019375 0.0000000 0.557012 0.186834 0.7697519 0.457345 0.374196 0 0.626101 0.622240 2.6480e-02 5 0.48843 0.68384 -0.1954050 9.4356e-01 0.37009934 insignificant 1.0000000 1.00000 insignificant 9.5396e-01 0.41356504 insignificant 1.0000000 1.00000 insignificant -0.04538100 0.5342846 lowCoverage 1 lowCoverage 0.626792 0.0091146 0.61586028 5 0.56447 0.142763 0.4217030 2.5639e-29 9.9876e-01 hypermethylated 1.9722e-27 1.0000000 hypermethylated 2.9970e-11 0.99969481 hypermethylated 1.7629e-09 1.00000 hypermethylated 0.5415184 2.7790e-09 lowCoverage 3.9701e-07 lowCoverage 0.629176 0.340564 0.17862325 5 0.61934 0.49050 0.1288449 4.4641e-05 0.98883961 weaklyHypermeth 2.2735e-03 1.000000 weaklyHypermeth 9.1092e-03 0.97480515 weaklyHypermeth 3.3738e-01 1.00000 insignificant 0.1577823 2.4782e-01 lowCoverage 1.000000 lowCoverage 0.622441 0.0091146 0.59717182 5 0.67234 0.142763 0.5295751 2.6283e-28 1.0000e+00 hypermethylated 2.3894e-26 1.0000e+00 hypermethylated 3.8735e-11 1.0000e+00 hypermethylated 2.4209e-09 1.0000e+00 hypermethylated 0.58689944 8.3962e-08 lowCoverage 1.1995e-05 lowCoverage 0.622814 0.340564 0.14329936 5 0.69791 0.49050 0.2074108 6.5108e-04 0.999931 weaklyHypermeth 2.5042e-02 1 weaklyHypermeth 5.3037e-02 0.999865 insignificant 1.0000e+00 1 insignificant 0.20316333 1.5568e-01 lowCoverage 1.000000 lowCoverage 0.0065789 0.340564 -0.3368451 5 0.127823 0.49050 -0.362672 1.0000e+00 1.1068e-09 hypomethylated 1.0000e+00 6.9176e-08 hypomethylated 1.0000e+00 1.4955e-07 hypomethylated 1.0000e+00 1.3595e-05 hypomethylated -0.38373611 2.4548e-02 lowCoverage 0.42864559 lowCoverage chr19 13817979 13818979 149805 ENSG00000205463 0.076646 414 10 0.042530 727 10 0.10529 547 10 0.071692 449 10 0.127300 372 10 0.18437 703 10 0.07687 590 10 0.12614 382 10 0.0628254 455 10 0.12362 376 10 0.096780 643 10 0.074453 386 10 0.0385478 419 10 0.13117 212 7 0.0593369 507 10 0.052394 399 10 0.183517 230 5 0.06336 400 10 0.051646 717 10 0.120750 643 10 0.10258 173 9 0.034286 225 6 0.14037 499 10 0.089886 354 10 0.130232 184 7 0.050317 940 10 0.179834 362 9 0.046916 249 9 0.12539 622 10 0.1017664 1015 10 0.149000 945 10 0.050929 786 10 0.0296934 473 10 0.004329 316 10 0.1856803 357 10 0.1250000 132 6 0.098872 476 10 0.0066803 915 10 0.064335 549 10 0.072310 557 10 0.069373 301 10 0.047750 477 9 0.07593 450 10 0.10248 0.046877 0.125475 0.077328 0.084784 0.217245 0.085586 0.0664515 0.082041 0.133325 0.138415 0.077075 0.0495069 0.129959 0.0660860 0.065746 0.094073 0.077406 0.0720864 0.137233 0.080603 0.0432006 0.103981 0.064113 0.0353008 0.053184 0.103581 0.065091 0.159175 0.079122 0.07756 0.067383 0.037222 0.0043687 0.1424005 0.0017323 0.065341 0.0058666 0.058039 0.069904 0.0761656 0.043291 0.081324 9 0.090168 0.073654 1.5218e-02 10 0.10780 0.10139 0.0064078 4.9491e-02 0.90890599 weaklyHypermeth 1.0000000 1.00000 insignificant 1.2401e-01 0.92848822 insignificant 1.0000000 1.00000 insignificant -0.00666278 0.6919041 insignificant 1 insignificant 0.090178 0.0228550 0.06451499 10 0.11678 0.107328 0.0094516 7.1831e-10 6.4470e-01 weaklyHypermeth 1.4366e-08 1.0000000 weaklyHypermeth 2.7465e-09 0.98070960 weaklyHypermeth 1.1941e-07 1.00000 weaklyHypermeth 0.0184197 5.8011e-01 insignificant 1.0000e+00 insignificant 0.090319 0.064696 0.03332166 10 0.12740 0.06018 0.0672168 2.0761e-03 0.52360378 weaklyHypermeth 5.9318e-02 1.000000 weaklyHypermeth 5.9794e-03 0.81634319 weaklyHypermeth 2.2998e-01 1.00000 insignificant 0.0275224 1.8214e-02 weaklyHypermeth 0.683381 insignificant 0.073666 0.0228550 0.05088327 10 0.10984 0.107328 0.0025098 1.5219e-09 9.8604e-01 weaklyHypermeth 3.6237e-08 1.0000e+00 weaklyHypermeth 6.6912e-06 9.9996e-01 weaklyHypermeth 2.0910e-04 1.0000e+00 weaklyHypermeth 0.02508247 4.7064e-01 insignificant 1.0000e+00 insignificant 0.073566 0.064696 0.01540796 10 0.10164 0.06018 0.0414620 1.5317e-02 0.135607 weaklyHypermeth 3.1260e-01 1 insignificant 1.1338e-01 0.377625 insignificant 1.0000e+00 1 insignificant 0.03418522 3.2866e-02 weaklyHypermeth 1.000000 insignificant 0.0225056 0.064696 -0.0340170 10 0.086783 0.06018 0.026603 9.8850e-01 9.0019e-07 weaklyHypometh 1.0000e+00 3.4623e-05 weaklyHypometh 9.9704e-01 1.3077e-04 weaklyHypometh 1.0000e+00 5.8787e-03 weaklyHypometh 0.00910275 7.7621e-01 insignificant 1.00000000 insignificant chr19 14079073 14080073 149807 ENSG00000141858 0.899302 309 10 0.825713 158 8 0.93672 157 7 0.948579 314 10 0.891429 132 10 0.87248 316 10 0.84595 148 10 0.90895 264 10 0.8760666 222 10 0.94478 148 10 0.907263 356 10 0.687229 105 5 0.8371587 212 10 0.91737 130 10 0.9475035 253 10 0.853711 149 10 0.966667 23 2 0.93220 365 10 0.958234 273 10 0.938632 302 10 0.94667 81 9 0.904388 151 10 0.79928 145 10 0.943977 137 11 0.966901 290 10 0.972127 182 10 0.822560 133 10 0.671350 115 8 0.85970 215 7 0.9147888 302 10 0.943931 343 10 0.931170 335 10 0.9486452 184 10 0.979645 188 7 0.9466807 400 8 1.0000000 78 5 0.917040 259 10 0.8570732 307 10 0.900835 199 10 0.891486 129 7 0.936539 253 7 0.846311 214 7 0.93264 138 8 0.90403 0.908084 0.944226 0.946910 0.893988 0.902024 0.853182 0.9226833 0.911494 0.946543 0.919471 0.825595 0.9333506 0.912358 0.9472566 0.863034 0.919138 0.936790 0.9588807 0.947064 0.948264 0.8983265 0.901109 0.926897 0.9761074 0.975085 0.833586 0.858765 0.895605 0.936607 0.93497 0.934059 0.943116 0.9659342 0.9079911 1.0000000 0.912478 0.8684700 0.912879 0.907863 0.9275778 0.866062 0.934800 6 0.919262 0.920099 -1.9899e-03 10 0.78282 0.83112 -0.0482960 5.5728e-01 0.43486097 insignificant 1.0000000 1.00000 insignificant 7.7345e-01 0.80492287 insignificant 1.0000000 1.00000 insignificant 0.00506033 0.8647848 insignificant 1 insignificant 0.919880 0.9151344 0.00317450 10 0.83126 0.933889 -0.1026310 2.1933e-01 2.0053e-03 inconclusive 1.0000e+00 0.2926421 insignificant 9.9852e-01 0.01371118 inconclusive 1.0000e+00 1.00000 insignificant -0.0467170 9.1322e-02 insignificant 9.8196e-01 insignificant 0.920092 0.909968 0.01304341 7 0.91438 0.90628 0.0081046 1.4333e-01 0.71766304 insignificant 1.0000e+00 1.000000 insignificant 3.2469e-01 0.64384880 insignificant 1.0000e+00 1.00000 insignificant -0.0067651 7.6222e-01 insignificant 1.000000 insignificant 0.920099 0.9151943 0.00065672 10 0.83112 0.939398 -0.1082825 7.2540e-01 1.0394e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9983e-01 3.2270e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.05177738 1.3396e-01 insignificant 1.0000e+00 insignificant 0.920694 0.909968 0.01619039 7 0.91401 0.90628 0.0077264 3.3750e-01 0.921795 insignificant 1.0000e+00 1 insignificant 5.2694e-01 0.790634 insignificant 1.0000e+00 1 insignificant -0.01182546 7.0159e-01 insignificant 1.000000 insignificant 0.9150743 0.909968 0.0047419 7 0.927278 0.90628 0.020999 6.5731e-02 9.1180e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1199e-01 9.8532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03995192 1.6302e-01 insignificant 1.00000000 insignificant chr19 14135903 14136903 149808 ASF1B ENSG00000105011 0.765189 195 13 0.800331 147 11 0.76518 187 13 0.645260 171 11 0.854861 91 11 0.62383 285 13 0.70840 130 11 0.87663 274 14 0.8037430 139 12 0.79995 176 13 0.832196 309 13 0.787345 87 7 0.7873283 241 13 0.74414 118 7 0.7866509 150 12 0.666667 30 3 0.632143 33 4 0.76956 197 12 0.866986 228 13 0.757146 272 9 0.79777 163 11 0.747733 149 10 0.79394 183 11 0.892594 102 10 0.906965 116 12 0.870896 273 13 0.832985 171 14 0.740456 98 10 0.82190 186 11 0.8314833 334 13 0.867691 296 13 0.858394 405 13 0.4848256 135 12 0.663650 187 13 0.4618550 93 2 0.6731729 104 8 0.556444 158 11 0.5372587 329 12 0.743725 147 8 0.795169 198 11 0.682959 92 8 0.723312 127 5 0.71233 120 5 0.85407 0.823929 0.735260 0.810154 0.858051 0.864606 0.805070 0.8406565 0.874667 0.746071 0.827285 0.668761 0.7813394 0.756551 0.8219211 0.624859 0.623097 0.823481 0.8763107 0.809063 0.866161 0.7131999 0.842793 0.866512 0.8643958 0.865354 0.839892 0.789240 0.836338 0.841942 0.84983 0.903745 0.508946 0.5799365 0.5214392 0.5540877 0.598380 0.5427951 0.714162 0.754819 0.7973782 0.778969 0.560616 4 0.828216 0.865641 -2.4977e-02 12 0.62717 0.82653 -0.1993575 9.9983e-01 0.45715734 insignificant 1.0000000 1.00000 insignificant 9.9997e-01 0.05494105 insignificant 1.0000000 1.00000 insignificant -0.06655659 0.0064429 weaklyHypometh 1 insignificant 0.830139 0.5795229 0.23643479 11 0.82317 0.554738 0.2684284 9.1448e-26 9.9999e-01 hypermethylated 5.7155e-24 1.0000000 hypermethylated 2.5509e-10 0.99992037 hypermethylated 1.2755e-08 1.00000 hypermethylated 0.2008094 1.3412e-03 weaklyHypermeth 3.9447e-02 weaklyHypermeth 0.829005 0.638360 0.10860920 8 0.66863 0.72457 -0.0559424 3.5852e-04 0.88088045 weaklyHypermeth 1.3279e-02 1.000000 weaklyHypermeth 2.7713e-01 0.37493573 insignificant 1.0000e+00 1.00000 insignificant 0.0321780 2.2496e-01 insignificant 1.000000 insignificant 0.866775 0.5800995 0.26790215 11 0.82381 0.591720 0.2320909 3.5633e-23 1.0000e+00 hypermethylated 2.2271e-21 1.0000e+00 hypermethylated 3.0227e-12 1.0000e+00 hypermethylated 2.0151e-10 1.0000e+00 hypermethylated 0.26736599 2.7843e-04 hypermethylated 1.6378e-02 hypermethylated 0.868064 0.639706 0.12074712 8 0.79254 0.79793 -0.0053875 5.4499e-04 0.893795 weaklyHypermeth 2.2734e-02 1 weaklyHypermeth 5.5031e-02 0.839125 insignificant 1.0000e+00 1 insignificant 0.09873456 2.3943e-03 weaklyHypermeth 0.319309 insignificant 0.5804196 0.637037 -0.1563917 8 0.598272 0.76906 -0.170792 9.9979e-01 4.5299e-06 weaklyHypometh 1.0000e+00 1.5620e-04 weaklyHypometh 1.0000e+00 1.6196e-04 weaklyHypometh 1.0000e+00 6.4783e-03 weaklyHypometh -0.16863143 3.8967e-03 weaklyHypometh 0.11431790 insignificant chr19 14248499 14249499 149811 ENSG00000209730,ENSG00000223021 0.629319 127 7 0.521340 109 9 0.45798 144 8 0.702506 145 5 0.789808 78 7 0.85597 206 8 0.48333 93 8 0.67345 217 8 0.7755357 134 7 0.81337 136 6 0.804789 213 8 0.367724 84 7 0.8682379 196 7 0.88621 93 7 0.8137134 125 6 0.584184 37 5 0.236111 22 2 0.77963 216 5 0.734349 140 6 0.825686 147 8 0.49092 64 5 0.719370 82 5 0.82101 100 6 0.738095 52 4 0.669596 89 4 0.855410 191 8 0.741972 94 6 0.648363 65 4 0.68991 205 8 0.7812495 207 8 0.807065 178 8 0.855237 232 8 0.4880464 161 7 0.327912 168 5 0.4409091 124 6 0.6656044 40 4 0.480822 117 7 0.7319812 199 7 0.875462 75 5 0.789423 157 5 0.854497 71 4 0.646079 94 5 0.76731 116 6 0.72450 0.669206 0.733466 0.781561 0.677721 0.780413 0.728418 0.7665054 0.703763 0.815494 0.792439 0.597861 0.8065022 0.813640 0.7813707 0.518118 0.192966 0.788726 0.7814316 0.779030 0.749500 0.7766326 0.755153 0.703379 0.7961452 0.815260 0.724163 0.805945 0.818206 0.780420 0.77316 0.798790 0.536414 0.4120057 0.7152401 0.6305297 0.526218 0.6292281 0.840632 0.780980 0.8185919 0.780295 0.813871 3 0.740950 0.785852 -2.1236e-02 7 0.66094 0.58000 0.0809472 8.3257e-01 0.41685318 insignificant 1.0000000 1.00000 insignificant 8.8624e-01 0.33291153 insignificant 1.0000000 1.00000 insignificant -0.05468769 0.2885232 insignificant 1 insignificant 0.740128 0.5829208 0.18060952 7 0.64642 0.513532 0.1328883 3.0700e-09 9.9601e-01 weaklyHypermeth 5.9039e-08 1.0000000 weaklyHypermeth 1.8851e-04 0.99925421 weaklyHypermeth 3.6009e-03 1.00000 weaklyHypermeth 0.1576167 5.7634e-02 insignificant 7.0285e-01 insignificant 0.741478 0.719298 -0.02610556 5 0.64725 0.75426 -0.1070104 9.5247e-01 0.16480735 insignificant 1.0000e+00 1.000000 insignificant 9.9977e-01 0.05285492 insignificant 1.0000e+00 1.00000 insignificant -0.1063914 8.6290e-02 insignificant 1.000000 insignificant 0.785990 0.5838509 0.20612815 8 0.60625 0.497907 0.1083396 1.0620e-09 9.9332e-01 hypermethylated 2.6550e-08 1.0000e+00 hypermethylated 5.2140e-05 9.9858e-01 hypermethylated 1.4483e-03 1.0000e+00 hypermethylated 0.21230436 1.5380e-02 weaklyHypermeth 2.6807e-01 insignificant 0.787025 0.719608 -0.00516829 5 0.55787 0.76100 -0.2031251 6.7442e-01 0.259461 insignificant 1.0000e+00 1 insignificant 9.8703e-01 0.074477 insignificant 1.0000e+00 1 insignificant -0.05170369 3.3115e-01 insignificant 1.000000 insignificant 0.5819775 0.719298 -0.2023164 5 0.497608 0.75426 -0.256651 9.9977e-01 1.1345e-04 hypomethylated 1.0000e+00 2.9506e-03 hypomethylated 1.0000e+00 1.8665e-03 weaklyHypometh 1.0000e+00 4.7858e-02 weaklyHypometh -0.26400804 6.4542e-03 weaklyHypometh 0.16135482 insignificant chr19 14269283 14270283 149812 ENSG00000209730,ENSG00000223021 0.759830 119 6 0.670863 178 6 0.73618 245 6 0.623693 151 4 0.760548 152 6 0.86820 200 6 0.68742 218 6 0.71485 196 6 0.7245344 228 6 0.67466 205 6 0.754179 225 6 0.777280 256 6 0.4554059 246 6 0.61325 152 4 0.6010157 302 6 0.669088 196 6 0.578241 108 4 0.54902 163 6 0.686999 236 6 0.610804 158 6 0.82273 55 4 0.446650 119 4 0.80965 151 6 0.757967 126 6 0.860863 68 2 0.667107 241 6 0.749879 142 6 0.791629 125 6 0.58605 146 6 0.6790296 265 6 0.565503 252 6 0.850139 149 6 0.1239075 207 6 0.015152 159 4 0.0547619 190 6 0.1666667 25 2 0.104492 166 5 0.0633752 202 6 0.216580 113 6 0.408264 121 6 0.385580 118 2 0.475170 101 4 0.30894 110 4 0.60620 0.670479 0.655954 0.533533 0.727842 0.865425 0.652397 0.7637401 0.740316 0.725580 0.720473 0.654627 0.4484047 0.611488 0.6115036 0.538929 0.547028 0.471324 0.6066674 0.598731 0.686556 0.3517022 0.826177 0.758789 0.6398609 0.680098 0.699622 0.742329 0.607342 0.635303 0.53851 0.796579 0.065956 0.0012252 0.0308433 0.0566038 0.084062 0.0603718 0.206905 0.344678 0.2686392 0.362331 0.276931 2 0.648704 0.662316 -7.4071e-03 6 0.68323 0.68910 -0.0058757 7.8555e-01 0.62830973 insignificant 1.0000000 1.00000 insignificant 9.9035e-01 0.14625975 insignificant 1.0000000 1.00000 insignificant -0.03979670 0.3643296 insignificant 1 insignificant 0.648704 0.0611170 0.59492302 6 0.68323 0.085433 0.5977926 1.5152e-52 1.0000e+00 hypermethylated 1.5152e-50 1.0000000 hypermethylated 1.6196e-15 1.00000000 hypermethylated 1.4723e-13 1.00000 hypermethylated 0.5877436 7.0988e-12 lowCoverage 2.0232e-09 lowCoverage 0.648704 0.289520 0.35560851 5 0.68323 0.35340 0.3298304 4.8102e-20 1.00000000 hypermethylated 8.0171e-18 1.000000 hypermethylated 2.7024e-10 1.00000000 hypermethylated 1.3512e-07 1.00000 hypermethylated 0.3168960 6.9393e-04 lowCoverage 0.105534 lowCoverage 0.662316 0.0611170 0.59932428 6 0.68910 0.085433 0.6036682 2.0643e-35 1.0000e+00 hypermethylated 2.2937e-33 1.0000e+00 hypermethylated 5.8727e-13 1.0000e+00 hypermethylated 4.1948e-11 1.0000e+00 hypermethylated 0.62754029 1.5676e-10 lowCoverage 3.9190e-08 lowCoverage 0.662316 0.289520 0.36507439 5 0.68910 0.35340 0.3357061 1.2428e-13 1.000000 hypermethylated 4.1427e-11 1 hypermethylated 1.8152e-08 1.000000 hypermethylated 6.0508e-06 1 hypermethylated 0.35669267 1.1504e-04 lowCoverage 0.057519 lowCoverage 0.0611170 0.289520 -0.2343410 5 0.085433 0.35340 -0.267962 1.0000e+00 1.5439e-12 hypomethylated 1.0000e+00 1.1876e-10 hypomethylated 1.0000e+00 6.4848e-06 hypomethylated 1.0000e+00 3.8146e-04 hypomethylated -0.27084763 1.6193e-03 lowCoverage 0.05529980 lowCoverage chr19 14322081 14323081 149814 ENSG00000209730,ENSG00000223021 0.729680 172 4 0.706999 181 6 0.70625 112 6 0.856814 84 5 0.742509 137 5 0.84341 111 5 0.66905 113 6 0.82283 128 6 0.7283298 109 6 0.73407 108 7 0.845584 197 6 0.758824 72 4 0.7599845 167 6 0.48810 42 3 0.6889506 96 6 0.920759 56 4 0.780000 32 4 0.72004 217 4 0.673390 117 6 0.891234 61 4 0.91615 81 6 0.750000 10 1 0.64956 162 6 0.824263 63 6 0.835784 52 3 0.695792 202 6 0.699961 73 6 0.954365 49 4 0.70146 156 5 0.7322607 175 6 0.772831 201 6 0.789187 99 6 0.5115469 241 6 0.394586 152 6 0.3637347 183 3 0.0000000 6 0 0.560673 120 6 0.4012746 202 6 0.615147 198 4 0.719973 137 5 0.516667 179 3 0.466184 81 1 0.64716 164 4 0.73326 0.615253 0.723722 0.805321 0.584524 0.725838 0.651282 0.7488831 0.704125 0.568896 0.800211 0.667146 0.6119016 0.629781 0.5533307 0.903511 0.349463 0.687598 0.7735074 0.826059 0.902489 0.8104275 0.652391 0.835678 0.8124818 0.751835 0.571819 0.776053 0.733397 0.628361 0.72642 0.790020 0.540641 0.5271513 0.5245170 0.3728632 0.432881 0.2374675 0.562764 0.664436 0.6214704 0.462128 0.624529 1 0.762111 0.749811 -1.7143e-02 6 0.76195 0.71408 0.0478650 2.8111e-01 0.15398436 insignificant 1.0000000 1.00000 insignificant 4.3556e-01 0.17049869 insignificant 1.0000000 1.00000 insignificant -0.02346026 0.4997482 insignificant 1 insignificant 0.762111 0.3926991 0.33409344 6 0.76195 0.441760 0.3201885 1.4585e-25 9.9992e-01 hypermethylated 8.1026e-24 1.0000000 hypermethylated 9.0325e-11 0.99998575 hypermethylated 5.0180e-09 1.00000 hypermethylated 0.3813712 4.2744e-03 lowCoverage 9.4986e-02 lowCoverage 0.762111 0.648221 0.11063771 3 0.76195 0.70737 0.0545795 2.8473e-04 0.20357527 lowCoverage 1.1389e-02 1.000000 lowCoverage 4.6612e-03 0.32667959 lowCoverage 1.8645e-01 1.00000 lowCoverage 0.1603152 1.9331e-02 lowCoverage 0.690403 lowCoverage 0.749811 0.3926991 0.35574124 6 0.71408 0.441760 0.2723235 6.4873e-19 9.9982e-01 hypermethylated 3.6041e-17 1.0000e+00 hypermethylated 1.3497e-09 9.9991e-01 hypermethylated 7.1036e-08 1.0000e+00 hypermethylated 0.40483145 2.9366e-03 lowCoverage 7.5297e-02 lowCoverage 0.749811 0.648221 0.17062930 3 0.71408 0.70737 0.0067145 1.9128e-03 0.554482 lowCoverage 6.5958e-02 1 lowCoverage 1.6624e-02 0.733030 lowCoverage 6.9133e-01 1 lowCoverage 0.18377542 1.0414e-02 lowCoverage 0.614779 lowCoverage 0.3926991 0.648221 -0.1053820 3 0.441760 0.70737 -0.265609 9.9986e-01 3.7938e-04 lowCoverage 1.0000e+00 7.2958e-03 lowCoverage 9.9936e-01 6.7151e-02 lowCoverage 1.0000e+00 8.5002e-01 lowCoverage -0.22105603 4.5091e-02 lowCoverage 0.68320189 lowCoverage chr19 15113094 15114094 149818 ILVBL ENSG00000105135 0.856349 103 8 0.872306 114 9 0.77208 63 2 0.867989 165 9 0.478022 48 2 0.82271 196 9 0.92424 21 2 0.75875 85 8 0.7777778 44 2 0.85997 54 5 0.839222 177 9 0.670370 41 1 0.8872367 140 9 0.73232 38 5 0.8653416 76 6 0.312500 47 2 0.533333 29 1 0.92097 184 9 0.918884 163 9 0.878998 116 9 0.64499 68 6 0.935897 75 6 0.94444 25 3 0.856818 33 2 0.809091 68 6 0.902984 228 9 0.616667 56 4 0.680556 23 0 0.89821 153 9 0.8369151 183 9 0.913097 181 9 0.963634 172 9 0.8094276 97 7 0.791169 126 9 0.3333333 90 3 1.0000000 38 3 0.633003 78 10 0.9362790 158 9 0.937831 121 9 0.979630 144 9 0.944653 90 6 0.895430 115 5 0.93223 121 9 0.96444 0.912328 0.846104 0.790000 0.586096 0.962321 0.722789 0.7966138 0.536667 0.835189 0.648495 0.504444 0.7331351 0.825983 0.6884004 0.539581 0.365470 0.889214 0.8892764 0.877928 0.739778 0.9969231 0.700000 0.828333 0.9933333 0.805855 0.970000 0.995556 0.816746 0.796284 0.91762 0.943840 0.851693 0.7233145 0.3244577 0.9911244 0.716429 0.9961630 0.948095 0.998667 0.9229825 0.749322 0.850035 1 0.817227 0.890736 -5.8331e-02 9 0.71183 0.77760 -0.0657651 9.9533e-01 0.03649294 weaklyHypometh 1.0000000 1.00000 insignificant 9.9953e-01 0.05270425 insignificant 1.0000000 1.00000 insignificant -0.05613972 0.2768941 insignificant 1 insignificant 0.818325 0.7277397 0.08233177 9 0.72415 0.635788 0.0883646 2.5134e-02 8.9922e-01 weaklyHypermeth 2.0602e-01 1.0000000 insignificant 7.5487e-01 0.93596879 insignificant 1.0000e+00 1.00000 insignificant 0.0269338 8.0527e-01 insignificant 1.0000e+00 insignificant 0.819188 0.942470 -0.10363777 9 0.79657 0.94938 -0.1528084 9.9503e-01 0.00313256 weaklyHypometh 1.0000e+00 0.522094 insignificant 9.8372e-01 0.00663587 weaklyHypometh 1.0000e+00 0.73732 insignificant -0.1604855 4.3168e-04 weaklyHypometh 0.086337 weaklyHypometh 0.891633 0.7240204 0.15804973 9 0.70482 0.582806 0.1220126 4.1628e-03 9.9109e-01 weaklyHypermeth 4.3819e-02 1.0000e+00 weaklyHypermeth 1.8871e-01 9.9115e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08307356 4.5483e-01 insignificant 1.0000e+00 insignificant 0.899518 0.942470 -0.04125711 9 0.84578 0.94938 -0.1035944 9.8685e-01 0.094821 insignificant 1.0000e+00 1 insignificant 9.7542e-01 0.346575 insignificant 1.0000e+00 1 insignificant -0.10434576 1.5049e-02 weaklyHypometh 0.716638 insignificant 0.7335640 0.942470 -0.2007467 9 0.682700 0.94938 -0.266676 9.9998e-01 3.1825e-04 hypomethylated 1.0000e+00 6.7162e-03 hypomethylated 9.9758e-01 2.6487e-02 weaklyHypometh 1.0000e+00 3.7839e-01 insignificant -0.18741932 1.1534e-01 insignificant 1.00000000 insignificant chr19 15411993 15412993 149825 WIZ ENSG00000011451 0.756143 200 5 0.686144 233 7 0.79842 139 7 0.890731 202 6 0.813268 68 4 0.82557 257 6 0.63201 113 5 0.70287 146 7 0.7903777 154 6 0.89885 87 4 0.856023 172 7 0.909259 54 4 0.8630297 145 5 0.87000 46 2 0.7196764 127 7 0.726190 28 3 0.316667 31 2 0.93398 214 5 0.768068 244 6 0.796222 197 6 0.79286 85 6 0.690401 89 5 0.66199 160 6 0.722933 86 5 0.970370 63 5 0.860444 222 7 0.767049 167 7 0.569793 65 5 0.74885 205 7 0.8344635 290 7 0.856715 226 7 0.870266 269 7 0.5916274 140 6 0.623741 127 6 0.4523810 101 5 0.6868687 36 2 0.716473 125 7 0.7550655 177 7 0.834467 134 4 0.779371 223 4 0.958440 166 4 0.872710 208 4 0.76811 181 5 0.87414 0.751363 0.853599 0.904984 0.802199 0.918915 0.789298 0.8546669 0.801036 0.943486 0.865625 0.875721 0.9247392 0.756023 0.9528617 0.782280 0.584322 0.937273 0.9041423 0.872377 0.919986 0.8304759 0.899916 0.921839 0.9714744 0.959236 0.863608 0.831213 0.858086 0.932878 0.88276 0.913691 0.745594 0.7829582 0.3760714 0.7268357 0.781152 0.8492218 0.933150 0.925897 0.9497709 0.858745 0.874153 3 0.852293 0.872651 -2.7198e-02 6 0.81447 0.80615 0.0083108 9.5078e-01 0.25614173 insignificant 1.0000000 1.00000 insignificant 8.8175e-01 0.52589684 insignificant 1.0000000 1.00000 insignificant -0.00116922 0.9788440 insignificant 1 insignificant 0.852505 0.6971429 0.15064408 5 0.80975 0.593056 0.2166929 1.3889e-07 8.7563e-01 weaklyHypermeth 2.2769e-06 1.0000000 weaklyHypermeth 2.6037e-03 0.76051892 weaklyHypermeth 3.7195e-02 1.00000 weaklyHypermeth 0.1399822 2.5943e-02 weaklyHypermeth 3.9307e-01 insignificant 0.852453 0.914474 -0.04188915 4 0.78257 0.82666 -0.0440919 5.1544e-01 0.01780260 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.2184e-01 0.00622069 lowCoverage 1.0000e+00 0.73732 lowCoverage -0.0649436 1.8551e-01 lowCoverage 1.000000 lowCoverage 0.872063 0.6926346 0.17635642 5 0.78615 0.574445 0.2117101 1.0934e-06 9.3785e-01 weaklyHypermeth 2.0249e-05 1.0000e+00 weaklyHypermeth 3.9024e-03 8.6528e-01 weaklyHypermeth 5.5748e-02 1.0000e+00 weaklyHypermeth 0.14115139 2.6440e-02 weaklyHypermeth 4.0061e-01 insignificant 0.873484 0.914474 -0.01351326 4 0.80811 0.82666 -0.0185496 5.1363e-01 0.142488 lowCoverage 1.0000e+00 1 lowCoverage 6.7696e-01 0.072629 lowCoverage 1.0000e+00 1 lowCoverage -0.06377434 2.0050e-01 lowCoverage 1.000000 lowCoverage 0.7017291 0.914474 -0.1869552 4 0.653968 0.82666 -0.172693 9.2860e-01 5.0898e-03 lowCoverage 1.0000e+00 6.7864e-02 lowCoverage 9.6506e-01 6.5973e-04 lowCoverage 1.0000e+00 1.9992e-02 lowCoverage -0.20492573 5.5436e-03 lowCoverage 0.14588475 lowCoverage chr19 15414039 15415039 149826 WIZ ENSG00000011451 0.769493 359 7 0.709682 123 7 0.73141 63 7 0.874283 227 7 0.815136 67 4 0.84520 347 7 0.82641 53 4 0.90374 118 6 0.8968254 88 6 0.74645 63 6 0.789462 198 7 0.895833 25 2 0.8698220 170 7 0.83823 51 4 0.8106576 80 6 1.000000 32 4 1.000000 6 0 0.84975 659 6 0.891232 262 7 0.823974 231 7 0.88683 70 7 0.797542 64 7 0.88032 118 7 0.797917 62 5 0.919531 179 6 0.769239 171 7 0.806403 149 7 0.819048 19 1 0.88091 132 7 0.8700680 137 7 0.785269 150 7 0.820829 281 7 0.6965751 146 7 0.536860 292 7 0.7528736 43 2 0.4512472 46 5 0.684088 122 7 0.6493550 219 7 0.771015 154 7 0.841758 296 7 0.843126 246 6 0.862839 277 7 0.77993 217 7 0.89153 0.749341 0.707802 0.899971 0.833273 0.871113 0.875169 0.9328708 0.882722 0.846782 0.842142 0.802875 0.8727799 0.873139 0.8220437 1.000000 0.942684 0.886411 0.9185271 0.882594 0.867607 0.8134635 0.877885 0.819904 0.9123000 0.790961 0.850507 0.774462 0.911186 0.860946 0.79665 0.858996 0.700695 0.5801374 0.7776421 0.4853260 0.658902 0.6577398 0.801759 0.879604 0.8836966 0.851483 0.816276 1 0.887958 0.856397 2.0616e-02 7 0.74143 0.85248 -0.1110480 2.1518e-01 0.97758925 insignificant 1.0000000 1.00000 insignificant 2.6714e-01 0.82862219 insignificant 1.0000000 1.00000 insignificant 0.00822066 0.7143125 insignificant 1 insignificant 0.888509 0.6820276 0.19370492 7 0.84735 0.642823 0.2045242 3.6278e-16 9.8417e-01 weaklyHypermeth 1.2510e-14 1.0000000 weaklyHypermeth 5.2069e-06 0.85271201 weaklyHypermeth 1.5314e-04 1.00000 weaklyHypermeth 0.2158795 3.8325e-03 weaklyHypermeth 8.7102e-02 weaklyHypermeth 0.888509 0.876471 0.01653225 7 0.84735 0.81812 0.0292277 2.7256e-01 0.92310400 insignificant 1.0000e+00 1.000000 insignificant 1.6829e-01 0.98344255 insignificant 1.0000e+00 1.00000 insignificant 0.0246449 3.4904e-01 insignificant 1.000000 insignificant 0.856209 0.6820276 0.18447228 7 0.83140 0.642823 0.1885791 2.1003e-11 7.0246e-01 weaklyHypermeth 6.1772e-10 1.0000e+00 weaklyHypermeth 3.8638e-04 8.2323e-01 weaklyHypermeth 7.5761e-03 1.0000e+00 weaklyHypermeth 0.20765879 5.0816e-03 weaklyHypermeth 1.1292e-01 insignificant 0.856209 0.876471 0.00019664 7 0.83140 0.81812 0.0132825 6.3315e-01 0.504379 insignificant 1.0000e+00 1 insignificant 8.0458e-01 0.635152 insignificant 1.0000e+00 1 insignificant 0.01642428 4.9776e-01 insignificant 1.000000 insignificant 0.6820276 0.876471 -0.1785986 7 0.642823 0.81812 -0.175297 9.5904e-01 1.1159e-05 weaklyHypometh 1.0000e+00 3.5997e-04 weaklyHypometh 8.3414e-01 1.2985e-02 weaklyHypometh 1.0000e+00 2.1657e-01 insignificant -0.19123451 7.1081e-03 weaklyHypometh 0.17336941 insignificant chr19 17324436 17325436 149833 GTPBP3 ENSG00000130299 0.859472 116 7 0.673036 53 7 0.81495 75 7 0.890647 107 7 0.757143 47 5 0.87535 138 7 0.73243 53 7 0.76454 112 7 0.8287879 53 4 0.86667 62 6 0.780943 148 7 0.000000 3 0 0.9047619 31 4 0.77381 56 4 0.7642857 54 5 0.800000 21 4 NA 0 0 0.82840 129 4 0.846130 129 7 0.793873 82 7 0.95918 67 7 0.785714 17 0 0.83435 69 7 0.967818 65 4 0.707483 36 4 0.761473 126 7 0.839264 121 7 0.444444 10 0 0.75354 121 7 0.6797258 71 7 0.888634 80 7 0.835273 156 7 0.4081109 94 7 0.531101 185 7 0.0649351 137 7 NA 0 0 0.481293 37 4 0.4752086 224 7 0.606349 102 7 0.740523 96 7 0.470238 78 7 0.691837 72 7 0.65570 72 7 0.85542 0.758530 0.852145 0.884689 0.736145 0.877247 0.810786 0.7722583 0.882421 0.924498 0.813020 NA 0.9096386 0.843373 0.8343373 0.897328 NA 0.826763 0.8683384 0.849412 0.979346 0.7670683 0.873006 0.954720 0.6385542 0.777159 0.877042 0.364626 0.844842 0.691931 0.93284 0.859088 0.481628 0.5726797 0.0273823 NA 0.592943 0.4872971 0.676171 0.709158 0.5567269 0.760298 0.648826 0 0.828455 0.814696 -7.4459e-04 7 0.80765 0.80617 0.0014759 4.7953e-01 0.47200028 insignificant 1.0000000 1.00000 insignificant 2.3305e-01 0.21401002 insignificant 1.0000000 1.00000 insignificant -0.02201050 0.7177584 insignificant 1 insignificant 0.828455 0.4017725 0.42393819 7 0.80765 0.390879 0.4167679 1.9212e-22 1.0000e+00 hypermethylated 8.0049e-21 1.0000000 hypermethylated 1.9545e-10 1.00000000 hypermethylated 1.0287e-08 1.00000 hypermethylated 0.3739351 6.6885e-03 weaklyHypermeth 1.3650e-01 insignificant 0.828455 0.645238 0.17436464 7 0.80765 0.63533 0.1723209 7.7645e-10 0.99999671 weaklyHypermeth 7.0587e-08 1.000000 weaklyHypermeth 8.5565e-06 0.99998953 weaklyHypermeth 9.5072e-04 1.00000 weaklyHypermeth 0.1331353 5.9531e-02 insignificant 1.000000 insignificant 0.814696 0.4017725 0.41854055 7 0.80617 0.390879 0.4152920 1.5732e-16 1.0000e+00 hypermethylated 6.0509e-15 1.0000e+00 hypermethylated 7.3695e-10 1.0000e+00 hypermethylated 4.0942e-08 1.0000e+00 hypermethylated 0.39594561 5.5228e-03 weaklyHypermeth 1.2006e-01 insignificant 0.814696 0.645238 0.17162054 7 0.80617 0.63533 0.1708450 2.6526e-06 1.000000 weaklyHypermeth 2.4115e-04 1 weaklyHypermeth 2.8604e-04 0.999995 weaklyHypermeth 2.3837e-02 1 weaklyHypermeth 0.15514581 2.9594e-02 weaklyHypermeth 1.000000 insignificant 0.4017725 0.645238 -0.2472271 7 0.390879 0.63533 -0.244447 9.9998e-01 3.3604e-04 hypomethylated 1.0000e+00 6.7677e-03 hypomethylated 9.9996e-01 3.7417e-03 weaklyHypometh 1.0000e+00 8.2511e-02 weaklyHypometh -0.24079980 4.4618e-02 weaklyHypometh 0.68320189 insignificant chr19 17586219 17587219 149834 GLT25D1 ENSG00000130309 0.833333 35 3 0.913194 43 2 0.69612 134 7 0.970221 64 4 0.556319 90 10 0.83973 128 7 0.65783 89 7 0.73030 59 4 0.8093537 74 7 0.97354 103 7 0.733084 110 7 0.562259 55 7 0.6601732 57 4 0.81293 38 2 0.8572902 77 4 0.928571 44 6 0.100000 6 0 0.79945 53 2 0.697143 55 2 0.771528 57 4 0.70710 38 5 0.794643 28 2 0.87749 39 5 0.677600 59 5 0.435374 23 2 0.756448 86 6 0.650703 59 7 0.527083 37 5 0.79310 62 2 0.9599105 73 7 0.924868 71 7 0.660165 51 4 0.4098730 84 7 0.394444 30 2 0.6793731 116 5 0.7500000 12 0 0.288000 60 5 0.6257937 82 7 0.868750 42 4 0.755495 47 3 0.945312 55 4 0.672619 15 2 0.65657 54 4 1.00000 0.887205 0.697186 0.938837 0.773768 0.968185 0.909008 0.8239669 0.832792 0.951814 0.821296 0.834343 0.9783550 0.696248 0.8079678 1.000000 0.558083 0.751748 0.9633382 0.941646 0.947391 0.8116883 0.857943 0.778388 0.6132756 0.920106 0.749606 0.582323 0.864099 0.915523 0.93831 0.922786 0.353512 0.4701938 0.5425439 0.6285589 0.148485 0.6805556 0.853114 0.815906 0.9280303 0.858210 0.868687 0 0.840237 0.827476 1.9096e-02 7 0.70179 0.56303 0.1387580 3.1028e-01 0.83218597 insignificant 1.0000000 1.00000 insignificant 9.9605e-02 0.98803132 insignificant 1.0000000 1.00000 insignificant 0.01474498 0.8144421 lowCoverage 1 lowCoverage 0.840237 0.4531250 0.34628046 5 0.70179 0.507593 0.1941979 1.6808e-13 9.9289e-01 hypermethylated 4.5427e-12 1.0000000 hypermethylated 6.0428e-06 0.99841184 hypermethylated 1.7265e-04 1.00000 hypermethylated 0.2205375 3.3206e-02 lowCoverage 4.6641e-01 lowCoverage 0.840355 0.863850 -0.02959088 3 0.74439 0.72928 0.0151161 9.7418e-01 0.44391315 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9244e-01 0.84829862 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0346301 6.3546e-01 lowCoverage 1.000000 lowCoverage 0.827476 0.4531250 0.34098743 5 0.56303 0.507593 0.0554398 8.1299e-08 9.9981e-01 hypermethylated 1.7298e-06 1.0000e+00 hypermethylated 1.4259e-03 9.5238e-01 weaklyHypermeth 2.2633e-02 1.0000e+00 weaklyHypermeth 0.20579254 4.4796e-02 lowCoverage 6.0535e-01 lowCoverage 0.830128 0.866667 -0.05874884 3 0.61422 0.74635 -0.1321338 9.5520e-01 0.122643 lowCoverage 1.0000e+00 1 lowCoverage 9.9410e-01 0.271170 lowCoverage 1.0000e+00 1 lowCoverage -0.04937510 5.0723e-01 lowCoverage 1.000000 lowCoverage 0.4516971 0.866667 -0.3819883 1 0.462828 0.74635 -0.283523 9.9998e-01 2.7585e-04 lowCoverage 1.0000e+00 6.1376e-03 lowCoverage 1.0000e+00 5.3788e-03 lowCoverage 1.0000e+00 1.0909e-01 lowCoverage -0.25516764 2.4481e-02 lowCoverage 0.42864559 lowCoverage chr19 18569383 18570383 149840 C19orf60 ENSG00000006015 0.832008 358 12 0.829558 161 12 0.72979 116 6 0.854099 310 12 0.637143 74 6 0.74837 255 10 0.76771 105 9 0.81944 57 6 0.7250611 70 4 0.91921 87 6 0.869622 239 9 0.699387 67 5 0.8682304 136 8 NA 0 0 0.7163795 110 7 0.650549 30 3 0.797381 57 3 0.92401 326 11 0.879365 154 11 0.904239 196 10 0.84167 56 5 0.853571 94 7 0.83551 242 12 0.873016 45 6 0.919524 82 7 0.791153 202 11 0.662637 84 7 0.982645 40 4 0.81196 74 7 0.8889777 196 12 0.885525 158 11 0.852936 288 10 0.6198671 133 7 0.614713 150 11 0.6941061 267 12 0.7166306 73 7 0.927083 46 4 0.7807532 190 12 0.841002 315 12 0.847037 379 12 0.860343 294 11 0.912504 281 12 0.78148 369 11 0.91251 0.822900 0.909312 0.933080 0.943703 0.837589 0.796516 0.9440138 0.826966 0.928073 0.934412 0.807589 0.8962402 NA 0.9061262 0.864895 0.912274 0.968390 0.9480514 0.924765 0.925711 0.8939787 0.944314 0.957918 0.9571606 0.898916 0.855888 0.959972 0.926747 0.977055 0.91678 0.930451 0.747101 0.5720423 0.7092250 0.7344332 0.878753 0.7666939 0.902452 0.930906 0.9127614 0.911838 0.900929 2 0.865887 0.858424 -1.4300e-02 9 0.83413 0.83002 0.0041100 9.3657e-01 0.21177548 insignificant 1.0000000 1.00000 insignificant 9.9880e-01 0.02231891 weaklyHypometh 1.0000000 1.00000 insignificant -0.05142319 0.1010406 insignificant 1 insignificant 0.866047 0.7287544 0.13480874 12 0.83425 0.727259 0.1069951 2.1889e-08 9.9742e-01 weaklyHypermeth 3.9798e-07 1.0000000 weaklyHypermeth 7.0190e-03 0.98221650 weaklyHypermeth 8.6655e-02 1.00000 weaklyHypermeth 0.0729777 2.0245e-01 insignificant 1.0000e+00 insignificant 0.866093 0.882173 -0.01588141 11 0.84609 0.85563 -0.0095405 9.4473e-01 0.35113285 insignificant 1.0000e+00 1.000000 insignificant 9.7404e-01 0.33182548 insignificant 1.0000e+00 1.00000 insignificant -0.0499695 1.1167e-01 insignificant 1.000000 insignificant 0.858703 0.7287544 0.13937476 9 0.84233 0.727259 0.1150733 3.9860e-07 9.9899e-01 weaklyHypermeth 7.9720e-06 1.0000e+00 weaklyHypermeth 1.0959e-04 9.9946e-01 weaklyHypermeth 2.6454e-03 1.0000e+00 weaklyHypermeth 0.12440087 4.8802e-02 weaklyHypermeth 6.4214e-01 insignificant 0.858242 0.882173 -0.00095891 9 0.81788 0.85563 -0.0377536 7.9517e-01 0.527228 insignificant 1.0000e+00 1 insignificant 3.0525e-01 0.980696 insignificant 1.0000e+00 1 insignificant 0.00145366 9.6293e-01 insignificant 1.000000 insignificant 0.7287544 0.882101 -0.1448886 11 0.727259 0.84453 -0.117269 9.9906e-01 2.7619e-04 weaklyHypometh 1.0000e+00 6.1376e-03 weaklyHypometh 9.9646e-01 1.8569e-02 weaklyHypometh 1.0000e+00 2.9950e-01 insignificant -0.12294721 5.1311e-02 insignificant 0.75457594 insignificant chr19 18716749 18717749 149841 CRTC1 ENSG00000105662 0.908136 626 20 0.768566 513 20 0.79783 437 20 0.924099 787 19 0.875702 259 16 0.84846 612 18 0.76268 356 18 0.87978 424 17 0.8603754 365 15 0.88808 374 17 0.806582 601 22 0.853325 289 15 0.8910319 547 17 0.92513 118 6 0.9100858 385 17 0.752270 152 7 0.794774 242 11 0.90064 973 20 0.862706 454 20 0.786285 462 18 0.81756 224 16 0.867018 410 19 0.88663 440 18 0.868901 208 14 0.892349 464 20 0.900157 638 18 0.863015 335 18 0.757100 180 15 0.92124 556 18 0.8997624 656 19 0.845635 599 19 0.856244 667 19 0.8305629 358 18 0.851871 475 19 0.6696970 266 11 0.8151103 350 18 0.791825 248 18 0.8931930 535 18 0.927155 641 16 0.926760 668 20 0.910656 569 19 0.910949 689 16 0.82772 725 19 0.90703 0.806279 0.847166 0.906811 0.835192 0.875907 0.718759 0.8549688 0.817780 0.854685 0.856008 0.837051 0.9118240 0.877608 0.8947142 0.756494 0.781458 0.872239 0.8829999 0.866408 0.821895 0.8613494 0.898585 0.849466 0.8550812 0.890341 0.866451 0.852316 0.890047 0.895511 0.90326 0.892959 0.822690 0.8118120 0.7018571 0.7754435 0.885761 0.8493196 0.910591 0.932030 0.8643002 0.859305 0.872127 12 0.839091 0.884959 -3.6811e-02 19 0.82845 0.80007 0.0283815 9.9891e-01 0.00361461 weaklyHypometh 1.0000000 1.00000 insignificant 9.8412e-01 0.16867306 insignificant 1.0000000 1.00000 insignificant -0.01480702 0.4159340 insignificant 1 insignificant 0.839242 0.8278027 0.02536040 19 0.85582 0.777492 0.0783327 2.0817e-03 1.6113e-01 weaklyHypermeth 1.9639e-02 1.0000000 weaklyHypermeth 2.6126e-01 0.04195758 inconclusive 1.0000e+00 1.00000 insignificant 0.0411169 2.6264e-01 insignificant 1.0000e+00 insignificant 0.839473 0.901580 -0.05350130 18 0.86869 0.90222 -0.0335310 7.4329e-01 0.00013306 weaklyHypometh 1.0000e+00 0.053301 weaklyHypometh 8.4268e-01 0.00035097 weaklyHypometh 1.0000e+00 0.17549 insignificant -0.0508205 5.3016e-02 insignificant 1.000000 insignificant 0.885145 0.8275090 0.05730340 20 0.83853 0.756146 0.0823871 6.0858e-03 6.6310e-01 weaklyHypermeth 6.0858e-02 1.0000e+00 weaklyHypermeth 1.9250e-01 2.0252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05592395 1.4223e-01 insignificant 1.0000e+00 insignificant 0.885720 0.901580 -0.00389671 19 0.90009 0.90222 -0.0021376 3.2840e-01 0.038303 weaklyHypometh 1.0000e+00 1 insignificant 5.0287e-01 0.045834 weaklyHypometh 1.0000e+00 1 insignificant -0.03601344 1.4826e-01 insignificant 1.000000 insignificant 0.8292902 0.901580 -0.0589901 19 0.848173 0.90222 -0.054050 7.8864e-01 3.2509e-02 weaklyHypometh 1.0000e+00 3.4558e-01 insignificant 6.0100e-01 2.1339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09193740 3.5265e-02 weaklyHypometh 0.55975638 insignificant chr19 18767000 18768000 149842 COMP ENSG00000105664 0.470883 136 12 0.273829 320 12 0.37247 289 15 0.388046 133 11 0.413596 231 13 0.32588 211 15 0.40102 384 15 0.32583 342 15 0.2939472 351 15 0.48859 285 15 0.514376 430 15 0.457453 264 12 0.1114632 476 15 0.20635 26 3 0.2319528 390 15 0.240708 219 10 0.237205 399 12 0.22061 156 13 0.318934 287 12 0.202118 266 15 0.54640 179 11 0.047930 162 6 0.36049 329 15 0.396630 153 11 0.359672 90 8 0.398194 374 15 0.285233 234 15 0.354078 188 12 0.40148 262 12 0.2063496 415 15 0.157331 423 15 0.650345 331 15 0.0192593 290 15 0.155389 341 12 0.0335145 178 9 0.0037037 95 4 0.054052 182 15 0.0415152 321 15 0.379829 193 12 0.243784 228 12 0.545421 67 6 0.222555 96 6 0.12875 127 7 0.40781 0.228975 0.314689 0.420969 0.449895 0.368702 0.431015 0.2947382 0.243062 0.386886 0.495768 0.498548 0.1000843 0.338596 0.2724712 0.339339 0.211149 0.190213 0.2573062 0.169222 0.442638 0.0872428 0.346835 0.494834 0.4008976 0.390052 0.302239 0.348926 0.341791 0.189486 0.13140 0.645879 0.011769 0.0443068 0.0293231 0.0058480 0.059219 0.0274372 0.214720 0.172826 0.3971926 0.178017 0.161984 3 0.336550 0.342994 -1.8182e-02 15 0.32968 0.35141 -0.0217291 9.3206e-01 0.18984455 insignificant 1.0000000 1.00000 insignificant 9.1865e-01 0.40854553 insignificant 1.0000000 1.00000 insignificant -0.02224873 0.6797202 insignificant 1 insignificant 0.336550 0.0334044 0.30100005 13 0.32968 0.042949 0.2867319 4.3962e-38 1.0000e+00 hypermethylated 3.9966e-36 1.0000000 hypermethylated 1.8346e-25 1.00000000 hypermethylated 9.1730e-23 1.00000 hypermethylated 0.2735238 1.5362e-07 hypermethylated 1.3966e-05 hypermethylated 0.336550 0.215190 0.08933700 11 0.32968 0.25739 0.0722887 1.3570e-03 0.99043297 weaklyHypermeth 4.2243e-02 1.000000 weaklyHypermeth 4.6579e-03 0.95863249 weaklyHypermeth 1.8645e-01 1.00000 insignificant 0.0206938 7.9786e-01 insignificant 1.000000 insignificant 0.342994 0.0334044 0.31610265 13 0.35141 0.042949 0.3084610 2.6896e-26 1.0000e+00 hypermethylated 1.9212e-24 1.0000e+00 hypermethylated 3.1754e-21 1.0000e+00 hypermethylated 1.0585e-18 1.0000e+00 hypermethylated 0.29577256 4.2783e-05 hypermethylated 3.8894e-03 hypermethylated 0.342994 0.215190 0.10545094 11 0.35141 0.25739 0.0940178 4.1626e-03 0.999731 weaklyHypermeth 1.1250e-01 1 insignificant 1.0901e-02 0.995082 weaklyHypermeth 5.4506e-01 1 insignificant 0.04294257 6.3278e-01 insignificant 1.000000 insignificant 0.0334044 0.215190 -0.1965992 11 0.042949 0.25739 -0.214443 1.0000e+00 7.8951e-18 weaklyHypometh 1.0000e+00 7.1774e-16 weaklyHypometh 1.0000e+00 6.7252e-11 weaklyHypometh 1.0000e+00 8.4065e-09 weaklyHypometh -0.25283000 2.2317e-02 weaklyHypometh 0.40575769 insignificant chr19 19185659 19186659 149846 NCAN ENSG00000130287 0.620554 242 5 0.455303 224 5 0.49807 208 6 0.585781 304 4 0.500764 188 5 0.63473 304 6 0.37594 222 6 0.55561 204 5 0.6824414 238 6 0.51512 180 6 0.615126 245 6 0.631413 150 5 0.3315298 222 5 0.54040 128 4 0.3709596 233 5 0.532681 76 5 0.629274 32 2 0.50328 436 5 0.466609 328 4 0.518957 260 6 0.85866 85 4 0.506078 108 5 0.71153 194 5 0.557284 133 5 0.656360 107 5 0.614649 322 5 0.400888 203 4 0.680385 97 5 0.44864 294 4 0.3717523 305 6 0.367439 303 6 0.632079 277 6 0.3609953 169 4 0.315779 232 5 0.3313953 264 2 0.4642857 51 3 0.407982 153 5 0.4535905 295 6 0.550458 283 5 0.625321 273 5 0.616242 301 5 0.658377 382 5 0.63100 247 5 0.61859 0.538974 0.561126 0.700856 0.567591 0.647340 0.532291 0.6416529 0.629762 0.601912 0.644359 0.611786 0.3859988 0.595907 0.5927900 0.578773 0.563894 0.612019 0.4540256 0.598126 0.769786 0.6359256 0.705249 0.668730 0.6473985 0.609059 0.447571 0.569852 0.499480 0.477160 0.50553 0.689892 0.360437 0.3441453 0.2610489 0.4368892 0.415261 0.5941839 0.651335 0.708395 0.5119674 0.705555 0.594454 4 0.566908 0.555189 1.2124e-02 5 0.51791 0.63981 -0.1219048 9.3737e-01 0.61601709 insignificant 1.0000000 1.00000 insignificant 9.9340e-01 0.35162315 insignificant 1.0000000 1.00000 insignificant -0.03891812 0.4387280 insignificant 1 insignificant 0.566712 0.3848797 0.16332606 5 0.45765 0.380267 0.0773796 2.6967e-04 7.5471e-01 weaklyHypermeth 2.8997e-03 1.0000000 weaklyHypermeth 7.7044e-03 0.86577742 weaklyHypermeth 9.0640e-02 1.00000 weaklyHypermeth 0.1392231 1.1344e-03 lowCoverage 3.5450e-02 lowCoverage 0.567036 0.623149 -0.05769535 5 0.58265 0.61654 -0.0338946 9.6497e-01 0.02156173 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8984e-01 0.17631547 insignificant 1.0000e+00 1.00000 insignificant -0.0880527 5.9499e-03 weaklyHypometh 0.371866 insignificant 0.555006 0.3848797 0.14468714 5 0.59479 0.380267 0.2145225 2.1353e-03 8.0115e-01 weaklyHypermeth 2.3725e-02 1.0000e+00 weaklyHypermeth 4.2338e-03 9.3152e-01 weaklyHypermeth 5.9631e-02 1.0000e+00 weaklyHypermeth 0.17814119 3.0685e-03 lowCoverage 7.6440e-02 lowCoverage 0.555006 0.623149 -0.07374730 5 0.59479 0.61654 -0.0217517 8.4094e-01 0.078401 insignificant 1.0000e+00 1 insignificant 9.5571e-01 0.419450 insignificant 1.0000e+00 1 insignificant -0.04913463 3.1948e-01 insignificant 1.000000 insignificant 0.3855422 0.622642 -0.2072008 5 0.434591 0.56176 -0.127171 9.6574e-01 3.7769e-03 weaklyHypometh 1.0000e+00 5.3956e-02 weaklyHypometh 9.6321e-01 4.1651e-03 weaklyHypometh 1.0000e+00 8.6773e-02 weaklyHypometh -0.22727582 6.1767e-05 lowCoverage 0.00882389 lowCoverage chr19 21509584 21510584 149856 ZNF429 ENSG00000197013 0.810887 158 7 0.819797 52 3 0.91964 24 1 0.936373 160 7 0.850000 31 3 0.83532 161 9 0.90923 26 1 0.65714 30 3 0.8016529 35 3 0.88542 19 0 0.745338 106 7 0.851852 14 0 0.6702323 63 3 0.00000 1 0 0.8166667 29 3 0.000000 1 0 0.944444 16 0 0.78379 206 7 0.695258 95 7 0.781173 172 8 0.77000 23 3 0.827160 65 3 0.85685 84 7 0.857143 30 3 0.937500 30 3 0.738696 161 7 0.888889 35 3 0.777778 11 0 0.85714 30 3 0.8215625 143 8 0.877522 137 7 0.765194 259 9 0.7997980 53 3 0.846814 71 3 0.8280922 124 8 0.9285714 23 3 0.812500 19 0 0.8281840 110 7 0.780158 154 8 0.842511 204 7 0.850934 217 7 0.862654 90 7 0.82076 289 7 0.96296 0.877961 0.925490 0.943922 0.843797 0.850327 0.867989 0.9095238 0.863636 0.918519 0.848320 1.000000 0.9073844 NA 0.9215440 NA 0.988889 0.941242 0.8888889 0.945316 0.873820 0.8148148 0.921949 0.961905 0.9888889 0.913478 1.000000 1.000000 0.977778 0.910500 0.97352 0.901158 0.800449 0.8343863 0.8814753 0.9182104 0.696296 0.9460956 0.939025 0.907843 0.9445782 0.967593 0.917122 0 0.869192 0.858135 -7.7636e-04 7 0.74397 0.74816 -0.0041876 8.6086e-01 0.77207050 insignificant 1.0000000 1.00000 insignificant 9.8608e-01 0.44097111 insignificant 1.0000000 1.00000 insignificant -0.09557557 0.1347622 lowCoverage 1 lowCoverage 0.869192 0.8100000 0.04956635 7 0.74397 0.810596 -0.0666226 8.2313e-02 9.4927e-01 insignificant 6.2358e-01 1.0000000 insignificant 3.0108e-01 0.61301890 insignificant 1.0000e+00 1.00000 insignificant -0.1049495 1.0477e-01 lowCoverage 1.0000e+00 lowCoverage 0.869534 0.863732 0.00495289 7 0.79819 0.83515 -0.0369563 2.7662e-01 0.38780006 insignificant 1.0000e+00 1.000000 insignificant 5.2741e-02 0.52236052 insignificant 1.0000e+00 1.00000 insignificant -0.0956933 1.3109e-01 lowCoverage 1.000000 lowCoverage 0.858135 0.8100000 0.04835463 7 0.74816 0.810596 -0.0624350 9.6640e-02 9.7821e-01 insignificant 7.3771e-01 1.0000e+00 insignificant 1.1466e-01 8.9237e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00937391 7.1756e-01 lowCoverage 1.0000e+00 lowCoverage 0.858566 0.863732 0.01506894 7 0.80331 0.83515 -0.0318381 1.8428e-01 0.558042 insignificant 1.0000e+00 1 insignificant 3.7932e-02 0.912158 weaklyHypermeth 1.0000e+00 1 insignificant -0.00011775 9.9588e-01 lowCoverage 1.000000 lowCoverage 0.8075949 0.863732 -0.0407713 7 0.768506 0.83515 -0.066640 9.1832e-01 1.5270e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4735e-01 5.2632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00925616 7.0557e-01 lowCoverage 1.00000000 lowCoverage chr19 22594637 22595637 149869 ENSG00000221790 0.773623 215 4 0.684473 129 5 0.63411 114 5 0.826631 228 4 0.809913 92 5 0.72507 286 5 0.80912 153 5 0.74414 95 5 0.6086048 81 5 0.79004 77 5 0.852588 245 5 0.785934 63 5 0.7645350 63 5 0.85833 38 4 0.8326546 75 5 0.903492 54 3 0.904545 21 2 0.77658 194 4 0.748209 200 5 0.701517 237 5 0.82500 37 3 0.600000 9 0 0.71384 149 5 0.809091 73 4 0.776042 32 3 0.695161 153 5 0.659524 85 4 0.818788 71 5 0.66012 156 5 0.7847239 154 5 0.663901 187 5 0.833931 220 4 0.6359720 169 5 0.499866 124 5 0.7105263 31 2 0.5666667 15 1 0.684656 174 5 0.5742704 222 5 0.657275 377 4 0.644769 287 4 0.617458 290 4 0.780787 279 4 0.80772 264 4 0.78565 0.784930 0.624638 0.839504 0.889625 0.831567 0.867354 0.8063627 0.725503 0.792586 0.868782 0.798242 0.7798241 0.885694 0.8396745 0.875000 0.814074 0.784883 0.8180735 0.739688 0.876042 0.8583333 0.900544 0.838258 0.7439236 0.756528 0.711111 0.786086 0.788303 0.900480 0.71099 0.854779 0.635989 0.5039290 0.6743811 0.7805556 0.747382 0.5191955 0.852035 0.810223 0.7187339 0.831794 0.842736 2 0.800752 0.772659 -9.6443e-06 4 0.75907 0.75102 0.0080496 6.0608e-01 0.77743715 lowCoverage 1.0000000 1.00000 lowCoverage 5.6164e-01 0.67128770 lowCoverage 1.0000000 1.00000 lowCoverage 0.04002860 0.1843197 lowCoverage 1 lowCoverage 0.800752 0.5986395 0.19369952 5 0.75907 0.617442 0.1416322 1.4095e-09 9.3487e-01 weaklyHypermeth 2.7637e-08 1.0000000 weaklyHypermeth 1.9085e-04 0.98907499 weaklyHypermeth 3.6009e-03 1.00000 weaklyHypermeth 0.1647130 1.9787e-03 lowCoverage 5.2071e-02 lowCoverage 0.800752 0.811914 -0.00476981 4 0.75907 0.70590 0.0531712 1.5989e-01 0.71387519 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.0409e-01 0.71709674 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0751034 1.2918e-01 lowCoverage 1.000000 lowCoverage 0.772659 0.5986395 0.18351916 4 0.75102 0.617442 0.1335827 2.7413e-06 9.7940e-01 lowCoverage 4.8952e-05 1.0000e+00 lowCoverage 8.1558e-03 9.9567e-01 lowCoverage 1.0324e-01 1.0000e+00 lowCoverage 0.12468441 1.0540e-02 lowCoverage 2.1080e-01 lowCoverage 0.772247 0.811497 -0.00574222 4 0.67930 0.64707 0.0322297 6.9354e-01 0.958407 lowCoverage 1.0000e+00 1 lowCoverage 7.4390e-01 0.972655 lowCoverage 1.0000e+00 1 lowCoverage 0.03507479 4.6143e-01 lowCoverage 1.000000 lowCoverage 0.5986395 0.811914 -0.2010730 4 0.617442 0.70590 -0.088461 8.9604e-01 4.5283e-03 lowCoverage 1.0000e+00 6.3779e-02 lowCoverage 9.2265e-01 8.5443e-02 lowCoverage 1.0000e+00 9.6003e-01 lowCoverage -0.08960962 1.1207e-01 lowCoverage 1.00000000 lowCoverage chr19 23978572 23979572 149874 ENSG00000201966 0.712500 44 5 0.604428 38 3 0.72248 268 7 0.821429 33 3 0.751901 82 5 0.88172 87 4 0.74282 107 5 0.82318 86 5 0.8293651 134 6 0.77403 153 5 0.724134 123 5 0.751661 103 5 0.8541667 45 5 0.82222 28 3 0.8551587 79 6 1.000000 54 5 0.692308 28 2 0.92007 47 3 0.843867 99 5 0.632374 80 5 0.75317 84 5 0.427451 51 3 0.90379 133 7 0.635913 59 5 0.732143 23 3 0.935911 80 5 0.667358 135 4 0.745192 86 5 0.83283 73 3 0.9246526 151 7 0.837607 155 7 0.825916 86 7 0.8048118 168 7 0.725946 62 5 0.6833333 70 5 0.9333333 11 0 0.730060 82 5 0.8727364 137 7 0.748016 48 3 0.666667 20 0 0.969388 52 3 0.946581 37 3 0.68485 56 6 0.76301 0.641484 0.744508 0.786530 0.879440 0.942700 0.915706 0.8994355 0.926354 0.936587 0.911764 0.912287 0.9726027 0.827794 0.8875571 1.000000 0.928352 0.848010 0.9413803 0.752631 0.845662 0.7030995 0.957878 0.692107 0.8264246 0.954512 0.832229 0.926106 0.898257 0.944670 0.90535 0.847856 0.859286 0.8313814 0.9450691 0.8584475 0.816243 0.7945469 0.843770 0.495902 0.9530333 0.949069 0.699460 1 0.843914 0.854839 -1.2124e-02 5 0.75419 0.79567 -0.0414804 6.6900e-01 0.01311929 weaklyHypometh 1.0000000 1.00000 insignificant 7.1708e-01 0.51459775 insignificant 1.0000000 1.00000 insignificant 0.01949600 0.6825496 lowCoverage 1 lowCoverage 0.843914 0.7849057 0.02512999 5 0.75419 0.736127 0.0180650 2.5032e-01 2.4525e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.1287e-01 0.23355724 insignificant 1.0000e+00 1.00000 insignificant -0.0037128 9.3606e-01 lowCoverage 1.0000e+00 lowCoverage 0.843914 0.835681 0.00529595 3 0.75419 0.78940 -0.0352117 3.4608e-01 0.00250371 lowCoverage 1.0000e+00 0.500743 lowCoverage 6.3695e-01 0.04933032 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0151094 8.3361e-01 lowCoverage 1.000000 lowCoverage 0.854839 0.7849057 0.06818505 7 0.79567 0.736127 0.0595454 8.6446e-03 7.7562e-01 weaklyHypermeth 7.9308e-02 1.0000e+00 weaklyHypermeth 1.5574e-01 6.8520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02320885 6.9181e-01 lowCoverage 1.0000e+00 lowCoverage 0.854839 0.835681 0.01955317 3 0.79567 0.78940 0.0062687 5.5165e-01 0.090529 lowCoverage 1.0000e+00 1 lowCoverage 6.3044e-01 0.098843 lowCoverage 1.0000e+00 1 lowCoverage -0.03460540 6.6580e-01 lowCoverage 1.000000 lowCoverage 0.7849057 0.835681 -0.0291892 3 0.736127 0.78940 -0.053277 9.3145e-01 6.8070e-02 lowCoverage 1.0000e+00 6.4829e-01 lowCoverage 9.0943e-01 1.8727e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01139656 8.8490e-01 lowCoverage 1.00000000 lowCoverage chr19 35057401 35058401 149987 CCNE1 ENSG00000105173 0.898926 550 6 0.800635 409 5 0.69476 108 5 0.918821 500 6 0.874370 68 3 0.92628 493 6 0.84909 115 5 0.93736 131 5 0.8204118 127 5 0.91506 107 5 0.875367 258 5 0.835714 64 5 0.8296064 123 5 0.84784 59 5 0.8350101 125 5 0.755556 45 5 1.000000 49 5 0.56927 814 8 0.855686 263 5 0.943843 344 6 0.88500 35 5 0.770897 64 3 0.84404 163 6 0.926520 115 5 0.834443 155 5 0.855619 334 5 0.742591 72 5 0.895758 52 5 0.88443 250 5 0.8988599 274 5 0.894356 375 5 0.728879 357 6 0.5069036 234 5 0.736667 104 5 0.5681818 155 3 0.7843995 94 3 0.645361 243 5 0.5641287 304 5 0.569472 495 6 0.819917 404 6 0.858379 547 6 0.807570 473 6 0.85201 451 6 0.87099 0.779716 0.691708 0.877956 0.850840 0.898622 0.826756 0.9193631 0.806858 0.896519 0.873861 0.808146 0.7718460 0.813418 0.8290592 0.731864 1.000000 0.773611 0.8174062 0.930806 0.870248 0.7411860 0.822357 0.920929 0.8231346 0.815027 0.873628 0.867919 0.884788 0.865819 0.86038 0.900043 0.524332 0.7791322 0.7148298 0.7836222 0.669555 0.5447391 0.813115 0.759468 0.8017917 0.762298 0.807201 5 0.849916 0.891266 -4.2140e-02 5 0.67953 0.70745 -0.0279118 9.9615e-01 0.04447327 weaklyHypometh 1.0000000 1.00000 insignificant 9.2159e-01 0.76784598 insignificant 1.0000000 1.00000 insignificant 0.00239687 0.9336620 insignificant 1 insignificant 0.850140 0.5194004 0.33016635 5 0.84433 0.606728 0.2376011 1.2528e-14 9.5387e-01 hypermethylated 3.6848e-13 1.0000000 hypermethylated 4.1196e-05 0.84340305 hypermethylated 9.5806e-04 1.00000 hypermethylated 0.2149064 2.7564e-03 lowCoverage 6.5629e-02 lowCoverage 0.850284 0.818067 0.03327925 5 0.80453 0.78081 0.0237225 2.0739e-01 0.75507790 insignificant 1.0000e+00 1.000000 insignificant 1.0176e-02 0.97786963 weaklyHypermeth 3.6343e-01 1.00000 insignificant 0.0677091 2.9209e-01 insignificant 1.000000 insignificant 0.892002 0.5194004 0.35912613 5 0.88006 0.606728 0.2733350 8.4359e-13 9.9719e-01 hypermethylated 2.6362e-11 1.0000e+00 hypermethylated 1.6015e-04 9.5520e-01 hypermethylated 3.5589e-03 1.0000e+00 hypermethylated 0.21250951 3.2020e-03 lowCoverage 7.6440e-02 lowCoverage 0.891314 0.817990 0.07705054 5 0.76995 0.71831 0.0516344 3.0533e-03 0.989117 weaklyHypermeth 8.7798e-02 1 weaklyHypermeth 2.0253e-02 0.998140 weaklyHypermeth 6.9838e-01 1 insignificant 0.06531228 3.0413e-01 insignificant 1.000000 insignificant 0.5194004 0.815184 -0.2915359 5 0.606728 0.80964 -0.202917 9.7558e-01 1.1802e-04 hypomethylated 1.0000e+00 2.9506e-03 hypomethylated 9.0987e-01 2.1951e-02 weaklyHypometh 1.0000e+00 3.3259e-01 insignificant -0.14719722 6.6678e-02 lowCoverage 0.91339223 lowCoverage chr19 35336322 35337322 150017 ENSG00000213092 0.867213 69 1 0.772683 67 5 0.819048 43 5 0.8043836 93 5 0.850000 40 5 0.6600000 75 1 0.845217 43 5 0.9000000 30 1 0.863636 19 1 0.984615 17 1 0.860366 105 5 0.966667 10 1 0.9428571 18 1 0.116667 16 1 0.5818182 26 1 1.000000 2 0 NA 0 0 0.6666667 30 1 0.8333333 18 1 0.980488 45 1 0.833333 28 1 0.6666667 6 1 0.260000 31 1 0.808333 23 1 0.8333333 30 1 0.813836 65 1 0.666667 30 1 1.000000 5 0 0.857143 14 1 0.775556 78 5 0.495849 68 5 0.9849057 61 1 0.3505176 48 5 0.0681818 44 1 0.2051471 100 5 NA 0 0 0.233757 64 5 0.1625316 99 5 0.5012658 111 5 0.558730 119 5 0.4238095 166 5 0.615385 13 1 0.5896471 185 5 0.8360656 0.702703 0.666667 0.821918 0.750000 0.8000000 0.826087 0.833333 0.818182 0.9230769 0.926829 0.8333333 0.714286 0.583333 0.909091 1.0000000 NA 0.6666667 0.8333333 0.902439 0.666667 0.6666667 0.800000 0.375000 0.833333 0.735849 0.666667 1.000000 0.8571429 0.800000 0.675676 0.9245283 0.3478261 0.0681818 0.0000000 NA 0.451613 0.0126582 0.506329 0.365079 0.6190476 0.615385 0.5882353 1 0.817232 0.756264 0.06039052 1 0.826448 0.726555 0.0998932 0.0298382 9.9625e-01 lowCoverage 1 1.000000 lowCoverage 0.1087068 9.7932e-01 lowCoverage 1 1.000000 lowCoverage 5.6452e-02 0.462471 lowCoverage 1 lowCoverage 0.817232 0.1746479 0.6534931 1 0.826448 0.2243980 0.6020498 1.5998e-23 1.0000e+00 lowCoverage 5.1607e-22 1.0000e+00 lowCoverage 2.0256e-08 1.0000e+00 lowCoverage 5.3306e-07 1.0000e+00 lowCoverage 0.60206031 4.1631e-07 lowCoverage 4.4831e-05 lowCoverage 0.817232 0.543771 0.27315027 1 0.826448 0.5438309 0.28261697 5.3113e-10 1.0000e+00 lowCoverage 4.4261e-08 1.0000e+00 lowCoverage 1.5178e-06 1.0000e+00 lowCoverage 1.5178e-04 1.00000000 lowCoverage 0.26831989 1.8746e-04 lowCoverage 2.3433e-02 lowCoverage 0.756264 0.1746479 0.5950555 1 0.726555 0.2243980 0.5021566 3.7735e-12 1.0000e+00 lowCoverage 6.5320e-11 1.0000e+00 lowCoverage 2.6639e-06 1.0000e+00 lowCoverage 5.1228e-05 1.00000000 lowCoverage 0.5456083 4.0314e-06 lowCoverage 3.6649e-04 lowCoverage 0.756264 0.543771 0.21246683 1 0.726555 0.5438309 0.18272374 4.5111e-04 9.9572e-01 lowCoverage 1.3458e-02 1.0000e+00 lowCoverage 1.3841e-03 9.9937e-01 lowCoverage 6.8258e-02 1.0000e+00 lowCoverage 0.2118678 7.6386e-03 lowCoverage 0.37216059 lowCoverage 0.1746479 0.543771 -0.37115289 5 0.2243980 0.5438309 -0.31943285 1.0000e+00 3.4017e-07 hypomethylated 1.0000000 6.8035e-06 hypomethylated 0.99999674 1.9629e-04 hypomethylated 1.00000 4.1396e-03 hypomethylated -0.33374043 5.3965e-04 lowCoverage 2.0347e-02 lowCoverage chr19 35435517 35436517 150038 ENSG00000213092 0.677961 253 8 0.336939 78 8 0.405907 106 8 0.6667968 280 8 0.347222 24 3 0.5277186 155 8 0.736111 72 8 0.1714744 64 5 0.575329 65 8 0.506818 56 6 0.712076 146 8 0.704167 26 3 0.2059295 106 8 NA 0 0 0.4330318 143 8 0.675000 50 8 0.893750 36 4 0.5226058 238 8 0.2489583 116 8 0.244384 146 8 0.751488 42 5 0.5051542 126 8 0.676511 74 8 0.438393 64 7 0.6068000 107 8 0.259628 76 8 0.201339 42 5 0.047619 21 0 0.426053 55 3 0.092556 125 8 0.182509 154 8 0.6491195 173 8 0.0000000 89 5 0.0234375 131 8 0.0113636 162 8 0.0575843 157 8 0.012500 56 6 0.0078125 149 8 0.5028351 286 8 0.494732 224 8 0.7228356 281 8 0.630357 249 8 0.4950788 266 8 0.6791070 0.322967 0.416609 0.696883 0.397262 0.5253998 0.741210 0.200828 0.541235 0.5647871 0.709939 0.6702532 0.207441 NA 0.435303 0.7417722 0.885443 0.4809725 0.2623783 0.252614 0.718882 0.4787468 0.715990 0.425859 0.590896 0.240535 0.177238 0.064950 0.4291742 0.085978 0.203264 0.6691044 0.0000000 0.0205696 0.0063291 0.0502421 0.016456 0.0063291 0.474145 0.482093 0.7352093 0.636383 0.4888138 3 0.517593 0.419263 0.09801514 8 0.517370 0.419754 0.0976159 0.0098503 9.9989e-01 weaklyHypermeth 1 1.000000 insignificant 0.0332096 9.9778e-01 weaklyHypermeth 1 1.000000 insignificant 1.0175e-01 0.242378 insignificant 1 insignificant 0.517593 0.0201613 0.4951296 8 0.517370 0.0218437 0.4955266 3.6136e-30 1.0000e+00 hypermethylated 1.5711e-28 1.0000e+00 hypermethylated 9.6023e-19 1.0000e+00 hypermethylated 2.4006e-16 1.0000e+00 hypermethylated 0.48606861 4.9161e-09 hypermethylated 7.0229e-07 hypermethylated 0.517593 0.571210 -0.04438924 8 0.517370 0.5592690 -0.04189870 9.1864e-01 2.0211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8359e-01 1.3499e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.06431606 3.5022e-01 insignificant 1.0000e+00 insignificant 0.419263 0.0201613 0.3995669 8 0.419754 0.0218437 0.3979107 1.3260e-15 1.0000e+00 hypermethylated 2.9466e-14 1.0000e+00 hypermethylated 8.3573e-14 1.0000e+00 hypermethylated 1.2888e-11 1.00000000 hypermethylated 0.3843145 1.7722e-04 hypermethylated 4.7313e-03 hypermethylated 0.419263 0.571210 -0.13182725 8 0.419754 0.5592690 -0.13951459 9.9975e-01 5.4215e-03 weaklyHypometh 1.0000e+00 3.8725e-01 insignificant 9.9995e-01 2.5808e-03 weaklyHypometh 1.0000e+00 2.3397e-01 insignificant -0.1660702 6.6091e-02 insignificant 1.00000000 insignificant 0.0201613 0.571210 -0.53347360 8 0.0218437 0.5592690 -0.53742529 1.0000e+00 1.4092e-38 hypomethylated 1.0000000 3.5231e-36 hypomethylated 1.00000000 5.7517e-13 hypomethylated 1.00000 1.9172e-10 hypomethylated -0.55038466 2.1172e-04 hypomethylated 1.2454e-02 hypomethylated chr19 35604198 35605198 150094 ZNF536 ENSG00000198597 0.948718 97 5 0.770833 54 5 1.000000 4 0 0.9840000 66 5 0.600000 11 0 0.9381123 97 5 0.750000 4 0 0.9178947 52 4 0.933333 9 0 1.000000 11 2 0.908123 102 5 0.000000 2 0 0.9750000 35 2 0.900000 10 2 1.0000000 5 0 1.000000 2 0 NA 0 0 0.9000000 112 2 0.9261905 82 2 0.913778 67 5 0.850000 29 3 0.8571429 14 2 0.850000 26 2 0.677778 41 5 0.9504762 47 2 0.912455 81 5 0.867873 43 3 0.666667 3 0 0.926667 52 2 0.945590 89 5 0.964000 78 5 0.8049451 74 5 0.8095238 58 5 0.7531746 89 5 0.5047619 29 2 1.0000000 3 0 0.756508 33 5 0.7805128 123 5 1.0000000 39 2 0.957029 100 5 0.9192208 86 5 0.819444 17 2 0.9571429 46 5 0.8717949 0.885417 1.000000 0.960000 0.000000 0.8452808 0.405666 0.894737 0.833333 1.0000000 0.794118 0.0000000 0.937500 0.900000 1.000000 1.0000000 NA 0.8000000 0.9261905 0.884444 0.625000 0.8571429 0.875000 0.250000 0.876190 0.917500 0.669683 NA 0.8166667 0.930642 0.960000 0.8873626 0.8571429 0.6329365 0.5047619 NA 0.585714 0.5512821 1.000000 0.892573 0.8813853 0.819444 0.8928571 0 0.892944 0.868284 0.03129165 2 0.922789 0.892053 0.0307359 0.2077179 9.7225e-01 lowCoverage 1 1.000000 lowCoverage 0.0938095 9.9108e-01 lowCoverage 1 1.000000 lowCoverage 5.2348e-03 0.931588 lowCoverage 1 lowCoverage 0.892944 0.7044776 0.2030702 2 0.922789 0.7749529 0.1478361 8.7878e-06 9.9821e-01 lowCoverage 6.7599e-05 1.0000e+00 lowCoverage 2.9487e-03 9.9979e-01 lowCoverage 2.3037e-02 1.0000e+00 lowCoverage 0.09395402 2.8302e-01 lowCoverage 1.0000e+00 lowCoverage 0.892944 0.927083 -0.02821419 2 0.922789 0.9523223 -0.02953327 9.6533e-01 2.1863e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7694e-01 4.6761e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.06919992 2.7227e-01 lowCoverage 1.0000e+00 lowCoverage 0.868284 0.7044776 0.1571372 5 0.892053 0.7749529 0.1171003 1.0019e-02 9.8665e-01 weaklyHypermeth 5.7252e-02 1.0000e+00 weaklyHypermeth 6.4316e-02 9.9162e-01 insignificant 3.6337e-01 1.00000000 insignificant 0.0887192 2.4939e-01 lowCoverage 1.0000e+00 lowCoverage 0.868284 0.927083 -0.06020002 5 0.892053 0.9523223 -0.06026913 9.9613e-01 4.2465e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9794e-01 8.3136e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0744347 1.0268e-01 lowCoverage 1.00000000 lowCoverage 0.7044776 0.927083 -0.22207749 5 0.7749529 0.9523223 -0.17736941 1.0000e+00 1.0943e-05 hypomethylated 1.0000000 1.5413e-04 hypomethylated 0.99999177 1.2352e-03 weaklyHypometh 1.00000 1.7397e-02 weaklyHypometh -0.16315394 5.6257e-02 lowCoverage 4.5368e-01 lowCoverage chr19 35797002 35798002 150152 ENSG00000223148 0.634791 363 15 0.623142 337 15 0.729595 213 15 0.7383350 218 15 0.620694 104 12 0.6642476 417 15 0.738964 216 15 0.7211371 256 15 0.671346 186 11 0.690810 198 15 0.577622 449 18 0.636389 101 10 0.8012536 270 15 0.699242 74 7 0.8229578 196 15 0.685243 89 11 0.582885 920 10 0.6866621 331 15 0.8051401 245 15 0.760783 357 15 0.548373 77 8 0.7410457 128 11 0.651711 255 15 0.787843 121 11 0.8450505 104 10 0.768709 312 15 0.595791 172 14 0.808929 79 8 0.728713 171 15 0.647042 303 15 0.753431 257 15 0.7702611 462 15 0.7651932 276 15 0.6614203 163 12 0.5473558 336 15 0.8429015 111 6 0.767068 131 15 0.5660369 280 15 0.6207832 398 15 0.631177 392 15 0.7881711 403 15 0.776845 316 15 0.7769099 369 15 0.7650383 0.762758 0.776916 0.819089 0.759116 0.8029828 0.764430 0.734869 0.742470 0.8481224 0.756619 0.7017151 0.822459 0.756310 0.850485 0.8033179 0.750834 0.8085626 0.8277910 0.840915 0.677567 0.7976909 0.784410 0.768342 0.858347 0.801686 0.779369 0.812741 0.7385099 0.769850 0.784042 0.8107445 0.7494269 0.6558069 0.6768043 0.8290135 0.744181 0.7264681 0.786877 0.789461 0.8096164 0.795064 0.8162013 6 0.764217 0.775636 0.00146326 15 0.658817 0.690993 -0.0321760 0.2735044 1.0235e-01 insignificant 1 1.000000 insignificant 0.6238309 2.5930e-01 insignificant 1 1.000000 insignificant -2.6013e-02 0.404209 insignificant 1 insignificant 0.764228 0.7116423 0.0667256 15 0.654853 0.6597075 -0.0048550 1.1831e-06 9.7902e-01 weaklyHypermeth 9.8588e-06 1.0000e+00 weaklyHypermeth 3.5207e-03 8.5998e-01 weaklyHypermeth 2.6672e-02 1.0000e+00 weaklyHypermeth 0.00289937 9.5676e-01 insignificant 1.0000e+00 insignificant 0.765005 0.792865 -0.01511600 15 0.651571 0.6406693 0.01090162 5.3438e-01 2.5741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0451e-01 4.1941e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02421521 5.7968e-01 insignificant 1.0000e+00 insignificant 0.775359 0.7116423 0.0646553 15 0.677558 0.6597075 0.0178505 7.7813e-05 9.8846e-01 weaklyHypermeth 5.9856e-04 1.0000e+00 weaklyHypermeth 2.0047e-02 9.3096e-01 weaklyHypermeth 1.3062e-01 1.00000000 insignificant 0.0289121 6.1552e-01 insignificant 1.0000e+00 insignificant 0.777318 0.792865 -0.01355247 15 0.693546 0.6406693 0.05287709 3.5035e-01 1.7541e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6949e-01 3.9724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0017976 9.6982e-01 insignificant 1.00000000 insignificant 0.7109557 0.792865 -0.08241610 15 0.6207374 0.6406693 -0.01993187 9.2709e-01 1.0601e-05 weaklyHypometh 1.0000000 1.5145e-04 weaklyHypometh 0.91564942 1.3059e-02 weaklyHypometh 1.00000 1.1934e-01 insignificant -0.02711458 6.7161e-01 insignificant 1.0000e+00 insignificant chr19 35813446 35814446 150156 ENSG00000223148 0.875407 384 6 0.814886 243 6 0.806153 126 6 0.9652015 297 4 0.778431 81 5 0.8253127 318 6 0.771851 151 6 0.8274219 128 6 0.745481 111 6 0.927083 92 6 0.883472 210 6 0.843939 58 5 0.8972948 108 6 0.962963 47 3 0.7565559 120 5 0.791667 59 5 0.647917 23 3 0.8728605 328 5 0.8770620 235 6 0.826414 234 6 0.731315 69 6 0.8472222 29 1 0.833750 169 6 0.769889 89 6 0.9484127 43 3 0.901854 220 6 0.744510 111 6 0.725170 38 5 0.824722 124 6 0.875915 212 6 0.911687 199 6 0.8638134 279 6 0.7468098 181 6 0.6847407 221 6 0.7883838 254 5 0.6027778 37 4 0.687798 201 6 0.5310149 255 6 0.7832325 290 5 0.718202 200 6 0.9124765 305 3 0.730839 364 4 0.6932598 260 5 0.9023275 0.839582 0.803090 0.939560 0.789128 0.8593593 0.835542 0.849312 0.881029 0.9242725 0.898343 0.9296296 0.928435 0.925683 0.831483 0.8280423 0.804682 0.8329113 0.8868328 0.868529 0.725807 0.8849206 0.859529 0.834023 0.905985 0.886136 0.847099 0.720232 0.8050041 0.896861 0.943089 0.8948470 0.6755443 0.6215828 0.5840838 0.5490878 0.671694 0.4774559 0.798696 0.838648 0.9015569 0.828400 0.7830548 3 0.867581 0.860759 -0.00098973 6 0.792980 0.812171 -0.0191909 0.5104330 3.0670e-01 insignificant 1 1.000000 insignificant 0.2507070 1.3405e-01 insignificant 1 1.000000 insignificant 3.3469e-03 0.904326 insignificant 1 insignificant 0.867801 0.5892080 0.3020338 6 0.841810 0.6571183 0.1846914 4.0562e-20 9.2805e-01 hypermethylated 9.4331e-19 1.0000e+00 hypermethylated 1.6004e-06 9.6208e-01 hypermethylated 2.8077e-05 1.0000e+00 hypermethylated 0.16128132 6.1943e-03 weaklyHypermeth 6.3859e-02 weaklyHypermeth 0.867581 0.847075 0.03248912 5 0.792980 0.7531014 0.03987841 5.3459e-03 9.0785e-01 weaklyHypermeth 1.1374e-01 1.0000e+00 insignificant 4.4319e-02 9.3664e-01 weaklyHypermeth 8.5228e-01 1.00000000 insignificant 0.06726677 1.6928e-01 lowCoverage 1.0000e+00 lowCoverage 0.861587 0.5892080 0.2995710 6 0.847532 0.6571183 0.1904141 1.7108e-11 9.3828e-01 hypermethylated 2.5159e-10 1.0000e+00 hypermethylated 1.2872e-05 9.6692e-01 hypermethylated 2.0318e-04 1.00000000 hypermethylated 0.1579344 6.7242e-03 weaklyHypermeth 7.0044e-02 weaklyHypermeth 0.860759 0.847075 0.03826244 5 0.812171 0.7531014 0.05906928 4.3621e-02 9.8237e-01 weaklyHypermeth 6.0136e-01 1.0000e+00 insignificant 8.7094e-02 9.9097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0639198 1.9773e-01 lowCoverage 1.00000000 lowCoverage 0.5892080 0.847565 -0.31043439 5 0.6571183 0.7952849 -0.13816662 6.3006e-01 6.3692e-07 hypomethylated 1.0000000 1.2017e-05 hypomethylated 0.70216468 5.7691e-04 hypomethylated 1.00000 9.0090e-03 hypomethylated -0.09401455 1.2084e-01 lowCoverage 7.8468e-01 lowCoverage chr19 35817920 35818920 150158 ENSG00000223148 0.930126 527 6 0.873453 537 9 0.859120 184 6 0.9383518 352 9 0.671852 175 7 0.9092802 434 9 0.909550 181 10 0.9110618 296 10 0.846769 207 10 0.939868 141 6 0.931031 450 10 0.862416 67 7 0.9429299 211 6 0.901997 111 5 0.8729243 217 6 0.937229 41 5 1.000000 19 3 0.9041511 617 6 0.9341740 407 7 0.931784 362 6 0.945238 61 5 0.8952381 60 4 0.849307 271 10 0.839185 136 9 0.9693606 96 5 0.853650 557 10 0.718138 154 5 0.800866 57 4 0.943640 302 7 0.843511 605 10 0.853287 575 10 0.9538063 350 9 0.8157621 400 10 0.7316776 309 10 0.7633343 657 9 0.6372354 73 4 0.614717 314 10 0.6933646 478 10 0.9333226 408 10 0.953641 409 10 0.9179377 388 6 0.876465 552 6 0.9159810 390 9 0.9079384 0.845010 0.826302 0.929688 0.889962 0.8918693 0.899745 0.915888 0.902886 0.8922426 0.929765 0.8286327 0.941173 0.924877 0.867602 0.9044337 0.948693 0.8514195 0.9161015 0.937925 0.953815 0.8595716 0.929276 0.949972 0.940512 0.918041 0.859880 0.871495 0.9293658 0.908849 0.929500 0.9401938 0.7761131 0.6823861 0.9064892 0.5996888 0.615617 0.6553122 0.916154 0.928788 0.8996820 0.898488 0.9067790 4 0.878071 0.907878 -0.02905632 10 0.808186 0.792882 0.0153034 0.9919510 1.0844e-02 weaklyHypometh 1 0.542202 insignificant 0.9495659 1.5879e-01 insignificant 1 1.000000 insignificant 2.8301e-02 0.282290 insignificant 1 insignificant 0.878229 0.6839982 0.2226813 10 0.881657 0.7046447 0.1770125 1.0254e-18 9.9362e-01 hypermethylated 2.2787e-17 1.0000e+00 hypermethylated 2.3297e-08 9.9999e-01 hypermethylated 5.8243e-07 1.0000e+00 hypermethylated 0.19105499 7.3448e-04 weaklyHypermeth 1.3858e-02 weaklyHypermeth 0.878229 0.906381 -0.01665583 9 0.881657 0.9323531 -0.05069590 9.9580e-01 8.6078e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9416e-01 3.5068e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01906594 3.3784e-01 insignificant 1.0000e+00 insignificant 0.908160 0.6839982 0.2347526 10 0.864963 0.7046447 0.1603178 1.4365e-15 9.9899e-01 hypermethylated 3.0565e-14 1.0000e+00 hypermethylated 1.3004e-05 9.9973e-01 hypermethylated 2.0318e-04 1.00000000 hypermethylated 0.1627539 1.6118e-03 weaklyHypermeth 2.4422e-02 weaklyHypermeth 0.908160 0.906381 0.00682914 9 0.864963 0.9323531 -0.06739054 4.6756e-01 5.1616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7033e-01 4.9803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0473671 7.4029e-02 insignificant 1.00000000 insignificant 0.6839982 0.906381 -0.21503172 9 0.7046447 0.9323531 -0.22770836 1.0000e+00 3.7195e-08 hypomethylated 1.0000000 8.6500e-07 hypomethylated 1.00000000 3.1804e-05 hypomethylated 1.00000 8.6134e-04 hypomethylated -0.21012093 5.4936e-04 hypomethylated 2.0347e-02 hypomethylated chr19 35818034 35819034 150159 ENSG00000223148 0.930126 527 6 0.873453 537 9 0.859120 184 6 0.9383518 352 9 0.671852 175 7 0.9092802 434 9 0.909550 181 10 0.9110618 296 10 0.846769 207 10 0.939868 141 6 0.931031 450 10 0.862416 67 7 0.9429299 211 6 0.901997 111 5 0.8729243 217 6 0.937229 41 5 1.000000 19 3 0.9041511 617 6 0.9341740 407 7 0.931784 362 6 0.945238 61 5 0.8952381 60 4 0.849307 271 10 0.839185 136 9 0.9693606 96 5 0.853650 557 10 0.718138 154 5 0.800866 57 4 0.943640 302 7 0.843511 605 10 0.853287 575 10 0.9538063 350 9 0.8157621 400 10 0.7316776 309 10 0.7633343 657 9 0.6372354 73 4 0.614717 314 10 0.6933646 478 10 0.9333226 408 10 0.953641 409 10 0.9179377 388 6 0.876465 552 6 0.9159810 390 9 0.9079384 0.845010 0.826302 0.929688 0.889962 0.8918693 0.899745 0.915888 0.902886 0.8922426 0.929765 0.8286327 0.941173 0.924877 0.867602 0.9044337 0.948693 0.8514195 0.9161015 0.937925 0.953815 0.8595716 0.929276 0.949972 0.940512 0.918041 0.859880 0.871495 0.9293658 0.908849 0.929500 0.9401938 0.7761131 0.6823861 0.9064892 0.5996888 0.615617 0.6553122 0.916154 0.928788 0.8996820 0.898488 0.9067790 4 0.878071 0.907878 -0.02905632 10 0.808186 0.792882 0.0153034 0.9919510 1.0844e-02 weaklyHypometh 1 0.542202 insignificant 0.9495659 1.5879e-01 insignificant 1 1.000000 insignificant 2.8301e-02 0.282290 insignificant 1 insignificant 0.878229 0.6839982 0.2226813 10 0.881657 0.7046447 0.1770125 1.0254e-18 9.9362e-01 hypermethylated 2.2787e-17 1.0000e+00 hypermethylated 2.3297e-08 9.9999e-01 hypermethylated 5.8243e-07 1.0000e+00 hypermethylated 0.19105499 7.3448e-04 weaklyHypermeth 1.3858e-02 weaklyHypermeth 0.878229 0.906381 -0.01665583 9 0.881657 0.9323531 -0.05069590 9.9580e-01 8.6078e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9416e-01 3.5068e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01906594 3.3784e-01 insignificant 1.0000e+00 insignificant 0.908160 0.6839982 0.2347526 10 0.864963 0.7046447 0.1603178 1.4365e-15 9.9899e-01 hypermethylated 3.0565e-14 1.0000e+00 hypermethylated 1.3004e-05 9.9973e-01 hypermethylated 2.0318e-04 1.00000000 hypermethylated 0.1627539 1.6118e-03 weaklyHypermeth 2.4422e-02 weaklyHypermeth 0.908160 0.906381 0.00682914 9 0.864963 0.9323531 -0.06739054 4.6756e-01 5.1616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7033e-01 4.9803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0473671 7.4029e-02 insignificant 1.00000000 insignificant 0.6839982 0.906381 -0.21503172 9 0.7046447 0.9323531 -0.22770836 1.0000e+00 3.7195e-08 hypomethylated 1.0000000 8.6500e-07 hypomethylated 1.00000000 3.1804e-05 hypomethylated 1.00000 8.6134e-04 hypomethylated -0.21012093 5.4936e-04 hypomethylated 2.0347e-02 hypomethylated chr19 35865564 35866564 150174 ENSG00000223148 0.013333 82 5 0.000000 49 5 0.019524 81 5 0.0000000 27 3 0.100000 40 5 0.0145503 164 5 0.041667 121 5 0.0205263 111 5 0.000000 97 5 0.000000 83 5 0.035714 113 5 0.011765 82 5 0.0000000 83 5 NA 0 0 0.0244532 134 5 0.075362 112 5 0.016667 72 5 0.0000000 38 3 0.0000000 76 5 0.034524 143 5 0.066667 39 3 0.0000000 35 5 0.027273 117 5 0.000000 56 5 0.0500000 24 3 0.000000 104 5 0.016667 66 5 0.061905 21 3 0.000000 102 5 0.000000 129 5 0.018182 141 5 0.0338384 170 5 0.0000000 72 5 0.0000000 93 5 NA 0 0 0.0000000 37 5 0.000000 39 5 0.0090909 87 5 0.0000000 133 5 0.000000 108 5 0.0000000 30 4 0.000000 80 5 0.0181818 49 5 0.0097324 0.000000 0.014251 0.000000 0.072993 0.0106206 0.030414 0.014983 0.000000 0.0000000 0.029979 0.0085874 0.000000 NA 0.019552 0.0597694 0.012165 0.0000000 0.0000000 0.025200 0.048662 0.0000000 0.019907 0.000000 0.036496 0.000000 0.012165 0.045186 0.0000000 0.000000 0.013271 0.0262479 0.0000000 0.0000000 NA 0.0000000 0.000000 0.0066357 0.000000 0.000000 0.0000000 0.000000 0.0132714 3 0.021077 0.015936 0.00493254 5 0.022422 0.017211 0.0052109 0.2256807 9.1878e-01 insignificant 1 1.000000 insignificant 0.2941773 8.6642e-01 insignificant 1 1.000000 insignificant -1.3994e-03 0.885139 lowCoverage 1 lowCoverage 0.021077 0.0030488 0.0193897 5 0.022422 0.0029851 0.0194370 2.6971e-02 9.9494e-01 weaklyHypermeth 1.3622e-01 1.0000e+00 insignificant 4.3099e-02 9.9577e-01 weaklyHypermeth 2.3681e-01 1.0000e+00 insignificant 0.01966000 6.5712e-03 lowCoverage 6.5377e-02 lowCoverage 0.021077 0.002500 0.01779358 5 0.022422 0.0027778 0.01964434 2.6653e-02 9.9498e-01 weaklyHypermeth 4.3348e-01 1.0000e+00 insignificant 5.5497e-02 9.9504e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01784182 2.2055e-02 lowCoverage 4.7055e-01 lowCoverage 0.015936 0.0030488 0.0141903 5 0.017211 0.0029851 0.0142262 2.7819e-01 9.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7067e-01 9.9994e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0210594 1.5530e-02 lowCoverage 1.3744e-01 lowCoverage 0.015936 0.002500 0.01303902 5 0.017211 0.0027778 0.01443346 2.7926e-01 9.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3172e-01 9.9992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0192412 3.2287e-02 lowCoverage 0.76874767 lowCoverage 0.0030488 0.002500 0.00021172 5 0.0029851 0.0027778 0.00020730 9.9903e-01 9.9942e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.99985380 9.9925e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00181818 6.7072e-01 lowCoverage 1.0000e+00 lowCoverage chr19 35878695 35879695 150176 ENSG00000223148 0.706887 214 8 0.600493 161 9 0.606416 174 9 0.5915344 90 7 0.603071 102 7 0.6457792 198 9 0.617913 140 9 0.6653810 135 9 0.559921 149 9 0.625830 126 9 0.702417 238 9 0.716049 81 7 0.4281746 93 7 0.717857 29 4 0.5715321 80 5 0.765194 134 9 0.598974 90 7 0.6696128 68 7 0.5709476 98 7 0.675349 214 9 0.569124 101 8 0.6388889 67 6 0.700121 184 9 0.691431 93 9 0.6010101 46 2 0.647162 191 8 0.569414 141 9 0.760280 88 9 0.642422 110 8 0.624949 194 9 0.744939 165 9 0.6583113 269 9 0.8382169 125 9 0.6910053 87 8 0.7098214 101 5 0.7063492 29 2 0.892151 156 9 0.7226378 145 9 0.7588705 145 9 0.793106 176 9 0.7258987 94 5 0.724206 92 7 0.7687831 88 5 0.6526833 0.588032 0.590702 0.593388 0.554661 0.6176261 0.609111 0.664812 0.545873 0.6052341 0.665435 0.6790443 0.552019 0.599028 0.630881 0.7693405 0.541473 0.6520451 0.5605051 0.651247 0.516581 0.5859240 0.663629 0.660682 0.573324 0.619986 0.559151 0.730496 0.5988384 0.580154 0.711878 0.6213079 0.8608743 0.7030841 0.8007691 0.6968912 0.875758 0.7183236 0.744032 0.766611 0.7078254 0.682026 0.7105046 4 0.613236 0.617950 -0.01507671 9 0.631322 0.658359 -0.0270362 0.8180002 7.0017e-02 insignificant 1 1.000000 insignificant 0.6147748 9.4191e-02 insignificant 1 1.000000 insignificant -2.2038e-02 0.374672 insignificant 1 insignificant 0.613236 0.8273717 -0.1875920 8 0.631322 0.7928711 -0.1615488 9.7857e-01 3.6285e-17 weaklyHypometh 1.0000e+00 1.8142e-14 weaklyHypometh 9.0359e-01 5.3068e-06 weaklyHypometh 1.0000e+00 1.8876e-03 weaklyHypometh -0.12806370 1.0750e-02 weaklyHypometh 1.0047e-01 insignificant 0.613236 0.731092 -0.12094275 9 0.631322 0.7567501 -0.12542783 1.0000e+00 1.6548e-06 weaklyHypometh 1.0000e+00 4.1371e-04 weaklyHypometh 9.9997e-01 2.5455e-04 weaklyHypometh 1.0000e+00 0.08485064 weaklyHypometh -0.12220620 2.0472e-05 weaklyHypometh 5.1180e-03 weaklyHypometh 0.617950 0.8273717 -0.1669121 8 0.658359 0.7928711 -0.1345126 7.7636e-01 1.7013e-12 weaklyHypometh 1.0000e+00 8.5066e-10 weaklyHypometh 5.7449e-01 6.7366e-05 weaklyHypometh 1.0000e+00 0.01684146 weaklyHypometh -0.1060261 2.5667e-02 weaklyHypometh 2.0868e-01 insignificant 0.617950 0.731092 -0.11432866 9 0.658359 0.7567501 -0.09839159 9.9982e-01 1.1432e-04 weaklyHypometh 1.0000e+00 2.5915e-02 weaklyHypometh 9.9951e-01 1.9236e-03 weaklyHypometh 1.0000e+00 2.3397e-01 insignificant -0.1001686 4.3005e-04 weaklyHypometh 0.09125921 weaklyHypometh 0.8273717 0.731092 0.09201428 8 0.7928711 0.7567501 0.03612100 2.3444e-04 2.0582e-01 weaklyHypermeth 0.0334921 9.6628e-01 weaklyHypermeth 0.06731196 1.8834e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00585750 8.7796e-01 insignificant 1.0000e+00 insignificant chr19 36496906 36497906 150325 ENSG00000223148 0.930417 181 6 0.920417 131 6 0.902694 54 5 0.9427552 109 6 1.000000 17 1 0.9491006 157 6 0.921296 25 2 0.7273929 128 6 0.863492 58 5 0.985566 101 5 0.904858 135 6 0.700000 8 0 0.9049494 126 6 0.956650 52 4 0.9365079 39 5 1.000000 3 0 0.333333 6 0 0.9515511 225 6 0.9380952 63 4 0.939885 129 6 0.860245 56 5 0.8916987 82 6 0.876560 53 5 0.851010 40 5 0.9161887 203 6 0.938285 116 6 0.785714 81 5 0.407407 23 1 0.910802 115 6 0.941392 149 6 0.908830 144 6 0.9466734 174 6 0.8342787 84 6 0.9164994 108 4 0.9907407 126 5 0.6250000 15 1 0.594177 89 6 0.8177802 191 6 0.8837163 57 4 0.918781 147 6 0.9277146 98 4 0.970238 59 4 0.9465148 111 6 0.9336317 0.891135 0.890838 0.910110 0.994779 0.9258316 0.900097 0.921034 0.854470 0.9791595 0.885255 0.7622569 0.883410 0.976528 0.900167 0.9593038 0.548613 0.9292192 0.9345865 0.932470 0.864927 0.8684462 0.831152 0.933280 0.908956 0.924374 0.810777 0.748538 0.8862898 0.927821 0.896246 0.9235300 0.8257712 0.8966317 0.9951267 0.7972095 0.823952 0.7828803 0.897050 0.914436 0.8832447 0.980576 0.9079946 0 0.914515 0.888979 0.02451091 6 0.782508 0.651167 0.1313411 0.1139561 9.6194e-01 insignificant 1 1.000000 insignificant 0.0717131 9.9533e-01 insignificant 1 1.000000 insignificant 3.2548e-02 0.554714 lowCoverage 1 lowCoverage 0.914515 0.8466558 0.0933958 6 0.782508 0.6237956 0.1587128 1.2230e-03 6.2154e-01 weaklyHypermeth 7.6918e-03 1.0000e+00 weaklyHypermeth 3.0820e-01 7.1041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08903543 2.5553e-01 lowCoverage 1.0000e+00 lowCoverage 0.915469 0.908898 0.00461907 4 0.923763 0.9263984 -0.00263565 4.9239e-01 5.0323e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.1529e-01 4.6207e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.04394493 2.4290e-01 lowCoverage 1.0000e+00 lowCoverage 0.888979 0.8466558 0.0523245 6 0.651167 0.6237956 0.0273718 7.5555e-02 6.2440e-01 insignificant 3.5978e-01 1.0000e+00 insignificant 7.5750e-01 2.7017e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0564879 4.8198e-01 lowCoverage 1.0000e+00 lowCoverage 0.891782 0.908898 -0.01289827 4 0.893418 0.9263984 -0.03298057 7.1039e-01 3.0521e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3881e-01 7.4284e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0764925 1.1241e-01 lowCoverage 1.00000000 lowCoverage 0.8519737 0.908898 -0.07781000 4 0.8523601 0.9263984 -0.07403823 2.6022e-01 4.1803e-02 lowCoverage 1.0000000 2.4163e-01 lowCoverage 0.30072715 1.9858e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.13298036 9.4803e-02 lowCoverage 6.4492e-01 lowCoverage chr19 36698854 36699854 150369 TSHZ3 ENSG00000121297 0.721327 233 5 0.729360 315 6 0.685055 165 5 0.8202928 200 5 0.786813 95 6 0.8111422 264 5 0.689442 131 6 0.8184078 186 6 0.804683 129 5 0.781678 140 5 0.819473 287 6 0.852904 74 5 0.7311962 141 5 0.782759 114 5 0.7415959 207 5 0.795588 97 5 1.000000 5 0 0.7148485 202 5 0.8847505 238 5 0.767952 165 5 0.592857 33 2 0.7368114 59 5 0.763911 117 5 0.922113 84 5 0.9250000 58 2 0.834049 355 6 0.667469 175 5 0.858929 108 5 0.690516 160 5 0.795164 438 6 0.878710 315 6 0.8659750 167 5 0.6483706 170 5 0.4437004 110 5 0.6666667 9 0 0.2777778 18 2 0.682414 228 5 0.7352077 237 6 0.8576039 268 5 0.860551 116 5 0.7889851 197 5 0.761000 185 5 0.7768888 152 5 0.7385316 0.638919 0.678070 0.763583 0.713150 0.8181135 0.690259 0.798890 0.768446 0.7998229 0.866196 0.8405875 0.706993 0.792802 0.769300 0.8480855 0.937276 0.7073834 0.8693712 0.772452 0.748484 0.7200140 0.828074 0.942595 0.833962 0.752627 0.605015 0.869609 0.6602677 0.711349 0.841837 0.7840424 0.6327806 0.2964398 0.7164807 NA 0.649717 0.8253675 0.800731 0.779551 0.7680481 0.754887 0.7799598 2 0.768890 0.778692 -0.00915372 5 0.777463 0.802146 -0.0246828 0.5730711 6.3571e-02 insignificant 1 1.000000 insignificant 0.8876143 9.8202e-02 insignificant 1 1.000000 insignificant -7.3287e-03 0.834929 lowCoverage 1 lowCoverage 0.768890 0.5919689 0.1777132 5 0.777463 0.6222847 0.1551784 3.9985e-08 9.9994e-01 weaklyHypermeth 3.9201e-07 1.0000e+00 weaklyHypermeth 1.8528e-05 9.9871e-01 weaklyHypermeth 2.6468e-04 1.0000e+00 weaklyHypermeth 0.21127387 3.1917e-02 lowCoverage 2.4935e-01 lowCoverage 0.768890 0.793893 -0.02507308 5 0.777463 0.8280921 -0.05062896 9.5543e-01 1.1614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3761e-01 2.1320e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02204237 4.2670e-01 insignificant 1.0000e+00 insignificant 0.778692 0.5919689 0.1917145 5 0.802146 0.6222847 0.1798612 6.5098e-08 9.9978e-01 weaklyHypermeth 7.4825e-07 1.0000e+00 weaklyHypermeth 6.3015e-04 9.9887e-01 weaklyHypermeth 6.1462e-03 1.00000000 weaklyHypermeth 0.2186025 2.7631e-02 lowCoverage 2.2105e-01 lowCoverage 0.778800 0.794118 -0.01735963 5 0.830411 0.8526504 -0.02223958 9.2767e-01 4.6383e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3040e-01 8.5040e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0147137 6.9670e-01 lowCoverage 1.00000000 lowCoverage 0.5919689 0.793893 -0.20923387 5 0.6222847 0.8280921 -0.20580735 9.9989e-01 1.5131e-05 hypomethylated 1.0000000 2.0088e-04 hypomethylated 0.99930803 1.5772e-03 weaklyHypometh 1.00000 2.0864e-02 weaklyHypometh -0.23331624 2.1900e-02 lowCoverage 2.2121e-01 lowCoverage chr19 36901111 36902111 150417 TSHZ3 ENSG00000121297 0.944934 440 8 0.857427 305 8 0.711648 61 6 0.9523366 288 8 0.921296 67 6 0.9364434 562 8 0.839286 130 6 0.9325519 111 7 0.925926 37 3 0.928571 11 0 0.920641 314 8 0.952381 22 0 0.9177083 45 6 0.943878 38 5 0.9627757 67 6 0.952381 34 3 NA 0 0 0.6828544 304 6 0.9776471 158 3 0.934900 457 7 0.904762 41 3 1.0000000 2 0 0.784103 205 8 0.984127 52 6 1.0000000 21 1 0.956242 293 8 0.828086 59 6 0.795918 28 3 0.943997 141 3 0.952102 202 8 0.972172 289 8 0.9635688 471 8 0.6372457 224 8 0.6224747 97 6 0.4285714 14 1 0.5000000 5 0 0.597586 256 8 0.6776263 282 8 0.9711564 728 8 0.931488 556 8 0.9275568 457 8 0.854722 196 6 0.9132404 561 8 0.9588226 0.837748 0.840488 0.949439 0.969136 0.9446372 0.958995 0.946691 0.843621 0.8888889 0.929411 0.9259259 0.960185 0.907407 0.933824 0.9135802 NA 0.8024884 0.9572985 0.916796 0.911817 NA 0.948260 0.994709 0.992036 0.949947 0.910802 0.886132 0.9604442 0.956234 0.966288 0.9681776 0.7439601 0.7714646 NA NA 0.693156 0.7973275 0.972839 0.944508 0.9605780 0.982527 0.9206910 0 0.906667 0.952142 -0.04513504 8 0.802507 0.848637 -0.0461306 0.9999953 1.1850e-03 weaklyHypometh 1 0.134559 insignificant 0.9941017 5.5664e-02 insignificant 1 1.000000 insignificant -1.8726e-02 0.525710 insignificant 1 insignificant 0.906930 0.6731207 0.2269858 8 0.891674 0.6149002 0.2767738 2.1602e-25 1.0000e+00 hypermethylated 8.3084e-24 1.0000e+00 hypermethylated 1.7890e-08 1.0000e+00 hypermethylated 4.8351e-07 1.0000e+00 hypermethylated 0.32778015 8.3634e-05 hypermethylated 2.5344e-03 hypermethylated 0.907294 0.946757 -0.04507135 8 0.909383 0.9380510 -0.02866778 5.7615e-01 3.2846e-02 weaklyHypometh 1.0000e+00 8.4221e-01 insignificant 1.1924e-01 3.2524e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01460184 5.8928e-01 insignificant 1.0000e+00 insignificant 0.952673 0.6731207 0.2777620 8 0.942930 0.6149002 0.3280301 1.0611e-25 1.0000e+00 hypermethylated 5.0527e-24 1.0000e+00 hypermethylated 4.4982e-09 1.0000e+00 hypermethylated 1.7993e-07 1.00000000 hypermethylated 0.3465058 3.6264e-05 hypermethylated 1.7269e-03 hypermethylated 0.953020 0.946757 0.00349467 8 0.951422 0.9380510 0.01337048 7.3055e-02 6.0633e-01 insignificant 8.5947e-01 1.0000e+00 insignificant 2.8464e-02 8.8228e-01 weaklyHypermeth 6.1879e-01 1.0000e+00 insignificant 0.0041238 8.9036e-01 insignificant 1.00000000 insignificant 0.6735395 0.946757 -0.27691575 8 0.6167627 0.9380510 -0.32128833 1.0000e+00 5.0771e-14 hypomethylated 1.0000000 2.3078e-12 hypomethylated 0.99999998 1.2670e-05 hypomethylated 1.00000 3.8395e-04 hypomethylated -0.34238199 7.9023e-05 hypomethylated 6.0787e-03 hypomethylated chr19 36901424 36902424 150418 TSHZ3 ENSG00000121297 0.943279 417 7 0.858068 271 7 0.670455 60 6 0.9499919 256 7 0.921296 67 6 0.9505576 528 7 0.839286 130 6 0.9241209 110 7 0.916667 36 3 0.928571 11 0 0.927737 283 7 0.952381 22 0 0.9535714 42 6 0.943878 38 5 0.9574580 66 6 0.952381 34 3 NA 0 0 0.6828544 304 6 0.9744538 156 3 0.937632 434 6 0.904762 41 3 1.0000000 2 0 0.807116 200 7 0.982143 44 5 1.0000000 17 1 0.955772 268 7 0.806597 58 6 0.795918 28 3 0.943997 141 3 0.963972 188 7 0.968196 270 7 0.9709694 437 7 0.6466482 210 7 0.6377841 93 6 0.4285714 14 1 1.0000000 3 0 0.595361 243 7 0.6539962 267 7 0.9786189 691 7 0.954864 500 7 0.9472830 400 7 0.997175 194 6 0.9294176 501 7 0.9588226 0.837748 0.840488 0.949439 0.969136 0.9446372 0.958995 0.946691 0.843621 0.8888889 0.929411 0.9259259 0.960185 0.907407 0.933824 0.9135802 NA 0.8024884 0.9572985 0.916796 0.911817 NA 0.948260 0.994709 0.992036 0.949947 0.910802 0.886132 0.9604442 0.956234 0.966288 0.9681776 0.7439601 0.7714646 NA NA 0.693156 0.7973275 0.972839 0.944508 0.9605780 0.982527 0.9206910 0 0.907475 0.953764 -0.04583364 7 0.792510 0.839900 -0.0473896 0.9999884 1.4294e-03 weaklyHypometh 1 0.134559 insignificant 0.9928570 4.5655e-02 weaklyHypometh 1 1.000000 insignificant -2.0499e-02 0.500088 lowCoverage 1 lowCoverage 0.907754 0.6746988 0.2258064 7 0.891574 0.6110335 0.2805406 1.1698e-23 1.0000e+00 hypermethylated 3.8994e-22 1.0000e+00 hypermethylated 4.7440e-07 1.0000e+00 hypermethylated 9.3020e-06 1.0000e+00 hypermethylated 0.24406111 2.2584e-02 lowCoverage 1.8820e-01 lowCoverage 0.908141 0.960192 -0.05282322 7 0.911799 0.9575031 -0.04570408 9.4350e-01 1.5055e-02 weaklyHypometh 1.0000e+00 5.7904e-01 insignificant 4.6804e-01 2.0858e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05701713 2.2677e-02 lowCoverage 4.7055e-01 lowCoverage 0.954330 0.6746988 0.2775469 7 0.944887 0.6110335 0.3338539 1.8833e-24 1.0000e+00 hypermethylated 7.5333e-23 1.0000e+00 hypermethylated 4.9931e-08 1.0000e+00 hypermethylated 1.4685e-06 1.00000000 hypermethylated 0.2645600 1.6234e-02 lowCoverage 1.3995e-01 lowCoverage 0.954708 0.960192 -0.00449581 7 0.954871 0.9575031 -0.00263172 2.4650e-01 4.6070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0699e-01 7.8667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0365182 1.7103e-01 lowCoverage 1.00000000 lowCoverage 0.6751515 0.960192 -0.28394774 7 0.6126098 0.9575031 -0.34489331 1.0000e+00 5.8257e-14 hypomethylated 1.0000000 2.5329e-12 hypomethylated 0.99999996 1.2666e-05 hypomethylated 1.00000 3.8395e-04 hypomethylated -0.30107824 1.0339e-02 lowCoverage 1.2363e-01 lowCoverage chr19 37126061 37127061 150457 ENSG00000221504 0.863287 157 8 0.777629 150 8 0.507847 147 8 0.7876360 76 5 0.677778 31 3 0.7736111 170 6 0.920000 38 4 0.7803709 91 5 0.668162 56 5 0.837778 40 5 0.836268 107 5 0.815972 31 4 0.7052381 94 5 0.488889 12 2 0.8539706 61 4 0.958333 39 3 0.712500 30 3 0.5207014 105 5 0.9216667 44 4 0.794579 139 7 0.884382 61 5 0.2209524 87 5 0.852946 69 8 0.896970 21 1 0.7418182 25 2 0.835512 198 9 0.768333 68 5 0.693333 28 4 0.760700 101 5 0.807496 180 8 0.847449 147 8 0.9242392 155 7 0.4291344 212 9 0.3605263 45 4 0.3310440 70 5 0.4285714 23 3 0.558575 67 5 0.4794795 198 9 0.4364109 188 5 0.579523 152 5 0.5405129 122 5 0.253050 141 5 0.3008730 124 5 0.7756714 0.725060 0.491957 0.705360 0.739379 0.8364496 0.912605 0.771801 0.705301 0.8984127 0.831194 0.8272848 0.708283 0.793342 0.828353 0.9597545 0.710805 0.5095426 0.9133754 0.824857 0.891501 0.2297052 0.826254 0.876241 0.698345 0.798135 0.760124 0.879473 0.7387245 0.680913 0.783885 0.8781736 0.4781057 0.4694825 0.5916237 0.4276457 0.506899 0.5525007 0.213036 0.448807 0.2963831 0.315374 0.3095705 4 0.753247 0.768421 0.00300697 5 0.776528 0.745000 0.0315281 0.9367627 1.6041e-02 inconclusive 1 0.592947 insignificant 0.9862984 5.8887e-02 insignificant 1 1.000000 insignificant -9.4001e-03 0.880193 lowCoverage 1 lowCoverage 0.753247 0.4682927 0.2715077 5 0.776528 0.4984728 0.2780554 1.7642e-13 1.0000e+00 hypermethylated 2.6331e-12 1.0000e+00 hypermethylated 5.3319e-09 1.0000e+00 hypermethylated 1.6662e-07 1.0000e+00 hypermethylated 0.32888909 3.9436e-06 lowCoverage 2.4648e-04 lowCoverage 0.753094 0.334250 0.41834420 5 0.751698 0.4731755 0.27852241 3.0236e-22 5.8323e-01 hypermethylated 1.0079e-19 1.0000e+00 hypermethylated 3.4380e-09 6.0772e-01 hypermethylated 8.5949e-07 1.00000000 hypermethylated 0.33803685 3.2454e-03 lowCoverage 1.3958e-01 lowCoverage 0.768421 0.4682927 0.2924562 8 0.745000 0.4984728 0.2465272 4.2063e-16 1.0000e+00 hypermethylated 1.0015e-14 1.0000e+00 hypermethylated 1.4485e-07 1.0000e+00 hypermethylated 4.0237e-06 1.00000000 hypermethylated 0.3382892 6.6031e-05 hypermethylated 2.4225e-03 hypermethylated 0.769096 0.334250 0.40935170 5 0.827778 0.4731755 0.35460228 2.7082e-16 8.8003e-01 hypermethylated 5.4163e-14 1.0000e+00 hypermethylated 3.6002e-07 9.8131e-01 hypermethylated 6.0004e-05 1.0000e+00 hypermethylated 0.3474370 2.0476e-03 weaklyHypermeth 0.19150415 insignificant 0.4674267 0.334250 0.13136824 5 0.4427475 0.4731755 -0.03042799 1.1958e-04 1.9685e-04 weaklyHypermeth 0.0199302 2.0941e-03 weaklyHypermeth 0.01654465 2.2306e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.00914776 9.0344e-01 insignificant 1.0000e+00 insignificant chr19 37252301 37253301 150491 ENSG00000221504 0.887840 164 5 0.638759 148 6 0.587854 126 5 0.8874153 67 5 0.660989 47 5 0.8546631 116 5 0.929231 68 5 0.7826923 156 6 0.662623 110 6 0.924806 95 5 0.778658 180 6 0.650794 58 6 0.8093002 117 6 NA 0 0 0.7475524 99 5 0.816667 19 2 0.699531 44 3 0.9306999 71 3 0.8641087 104 6 0.703984 145 6 0.698103 67 6 0.7471542 57 4 0.794693 114 5 0.745106 71 6 0.6875000 20 2 0.746423 137 6 0.591388 98 5 0.788889 46 4 0.809087 108 5 0.747970 208 5 0.670805 136 6 0.8750498 232 6 0.6996152 182 6 0.5959486 122 5 0.3333333 12 1 0.5575397 39 3 0.695234 84 6 0.8477589 192 5 0.7442633 113 5 0.835569 145 5 0.6572469 88 3 0.807464 98 5 0.6042929 113 3 0.8801699 0.649333 0.620045 0.867680 0.714120 0.8450885 0.892906 0.838877 0.718955 0.9083547 0.780992 0.6301020 0.805358 NA 0.804592 0.7684211 0.714367 0.8761352 0.8123896 0.748141 0.751024 0.6765796 0.792107 0.792278 0.765977 0.770470 0.684924 0.813534 0.7274265 0.785342 0.664724 0.8833471 0.7065829 0.6048724 0.5803997 0.6600430 0.745942 0.8253880 0.769064 0.851480 0.7802340 0.774933 0.6965140 3 0.790072 0.786708 -0.00057756 5 0.762400 0.733385 0.0290155 0.0881366 2.0565e-01 insignificant 1 1.000000 insignificant 0.1780663 5.3394e-01 insignificant 1 1.000000 insignificant 3.8056e-02 0.259282 lowCoverage 1 lowCoverage 0.790072 0.6782884 0.1011445 5 0.762400 0.6435204 0.1188798 1.7165e-04 9.8015e-01 weaklyHypermeth 1.1677e-03 1.0000e+00 weaklyHypermeth 1.1074e-02 9.1698e-01 weaklyHypermeth 7.5331e-02 1.0000e+00 weaklyHypermeth 0.15833182 7.7515e-02 lowCoverage 5.0010e-01 lowCoverage 0.790072 0.820467 -0.01699522 5 0.762400 0.7453546 0.01704558 3.3731e-01 2.6867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5885e-01 6.4190e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.05013614 3.5521e-01 lowCoverage 1.0000e+00 lowCoverage 0.786708 0.6782884 0.1068139 6 0.733385 0.6435204 0.0898643 1.0836e-05 9.3554e-01 weaklyHypermeth 9.5893e-05 1.0000e+00 weaklyHypermeth 2.9974e-02 8.2245e-01 weaklyHypermeth 1.8389e-01 1.00000000 insignificant 0.1202755 1.5570e-01 lowCoverage 8.6076e-01 lowCoverage 0.786708 0.820467 -0.02513381 5 0.733385 0.7453546 -0.01196988 6.5836e-01 3.7063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9606e-01 4.4257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0120798 8.1255e-01 lowCoverage 1.00000000 lowCoverage 0.6782884 0.820467 -0.11885576 5 0.6435204 0.7453546 -0.10183417 9.0493e-01 2.1179e-03 weaklyHypometh 1.0000000 1.8498e-02 weaklyHypometh 0.55830062 7.9547e-02 insignificant 1.00000 5.0991e-01 insignificant -0.10819569 2.2983e-01 lowCoverage 1.0000e+00 lowCoverage chr19 38443168 38444168 150554 SLC7A10 ENSG00000130876 0.794024 259 8 0.803402 131 9 0.813592 148 11 0.9473399 300 8 0.839506 45 5 0.8137042 259 10 0.788358 68 7 0.7229923 89 6 0.848485 49 4 0.946248 47 3 0.730004 191 8 0.898148 28 3 0.9034422 135 6 1.000000 5 0 0.9173056 98 6 0.437500 16 0 0.727778 31 3 0.6981740 322 9 0.9058761 114 8 0.834956 210 8 0.951923 65 6 0.9365982 144 7 0.887032 164 8 0.860371 70 5 0.9106818 199 7 0.882614 188 10 0.705556 70 4 0.842593 25 1 0.898841 81 8 0.878704 158 8 0.824688 160 10 0.8734515 253 8 0.4698196 171 11 0.4060045 164 8 0.6004080 142 6 0.2991212 143 8 0.551237 67 6 0.5796496 198 10 0.8580756 216 8 0.772882 265 8 0.8276483 231 7 0.892677 186 5 0.9054147 305 8 0.8620058 0.792951 0.769255 0.918607 0.678571 0.8219366 0.761730 0.786653 0.846517 0.9005102 0.827752 0.8005952 0.915941 0.905962 0.930972 0.5684974 0.697007 0.7695170 0.8504274 0.880215 0.900755 0.9165142 0.847361 0.834261 0.971834 0.921564 0.716518 0.760647 0.8612617 0.860689 0.937722 0.8427286 0.2017746 0.2606480 0.4973610 0.2236089 0.516074 0.3889993 0.901877 0.924001 0.8757993 0.835328 0.9032016 1 0.842644 0.880711 -0.04367942 8 0.832868 0.879134 -0.0462667 0.9999619 4.6198e-03 weaklyHypometh 1 0.329988 insignificant 0.9999228 2.8476e-02 weaklyHypometh 1 1.000000 insignificant -5.2546e-02 0.121156 insignificant 1 insignificant 0.842644 0.4343891 0.4468453 8 0.832868 0.5614906 0.2713769 5.1644e-42 9.9648e-01 hypermethylated 3.9726e-40 1.0000e+00 hypermethylated 5.4842e-10 9.9900e-01 hypermethylated 2.1093e-08 1.0000e+00 hypermethylated 0.33416842 2.1460e-04 hypermethylated 5.1095e-03 hypermethylated 0.842582 0.890274 -0.04249109 8 0.818940 0.8687943 -0.04985443 9.3975e-01 2.7722e-03 weaklyHypometh 1.0000e+00 2.1324e-01 insignificant 8.7166e-01 2.5558e-02 weaklyHypometh 1.0000e+00 0.88159562 insignificant -0.03279765 3.8026e-01 insignificant 1.0000e+00 insignificant 0.880711 0.4343891 0.4896575 8 0.879134 0.5614906 0.3176436 2.4933e-33 1.0000e+00 hypermethylated 1.5583e-31 1.0000e+00 hypermethylated 2.9420e-10 1.0000e+00 hypermethylated 1.4987e-08 1.00000000 hypermethylated 0.3867143 1.7979e-04 hypermethylated 4.7313e-03 hypermethylated 0.880407 0.890274 -0.00534580 8 0.869062 0.8687943 0.00026784 5.2084e-01 3.8435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2322e-01 4.0639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0197482 5.2779e-01 insignificant 1.00000000 insignificant 0.4337486 0.890274 -0.47858936 8 0.5249482 0.8687943 -0.34384608 9.9999e-01 2.8207e-21 hypomethylated 1.0000000 2.8207e-19 hypomethylated 0.99996489 2.4388e-07 hypomethylated 1.00000 1.7420e-05 hypomethylated -0.36696606 1.9462e-04 hypomethylated 1.2164e-02 hypomethylated chr19 38450041 38451041 150555 SLC7A10 ENSG00000130876 0.885180 203 9 0.787295 314 11 0.756568 205 10 0.8100789 344 11 0.735616 156 9 0.8758264 430 12 0.726160 306 11 0.7877850 233 12 0.823567 116 7 0.795521 170 11 0.911524 299 12 0.683945 134 9 0.7436736 277 11 0.907639 70 4 0.8214979 198 9 0.525714 50 6 0.645623 69 5 0.7030847 235 10 0.8552788 377 12 0.867334 387 12 0.804679 142 11 0.7922182 174 7 0.639923 219 12 0.841403 149 11 0.8294383 211 8 0.839728 451 11 0.782146 188 12 0.826554 103 10 0.867271 318 12 0.758175 453 11 0.812182 514 12 0.8740487 482 13 0.5925792 302 12 0.6931774 300 12 0.8882021 353 7 0.3979076 207 8 0.727653 172 9 0.5542011 553 12 0.7660989 288 10 0.856941 257 10 0.7110880 131 7 0.717781 175 8 0.7952888 348 12 0.8833857 0.864759 0.807937 0.908590 0.849572 0.9359423 0.846610 0.839518 0.818152 0.8657003 0.929318 0.8217890 0.768115 0.836038 0.829639 0.7024133 0.857659 0.8095452 0.8950585 0.927630 0.860242 0.8067346 0.877586 0.895433 0.808010 0.875443 0.880323 0.906115 0.8914005 0.885012 0.878417 0.9410591 0.6790615 0.7946575 0.8761294 0.4636630 0.859739 0.6407266 0.799403 0.791035 0.7410924 0.706917 0.8393740 3 0.844673 0.861561 -0.01585945 11 0.666544 0.680203 -0.0136586 0.9988845 7.9174e-02 insignificant 1 1.000000 insignificant 0.9831314 7.8310e-02 insignificant 1 1.000000 insignificant -2.3202e-02 0.414427 insignificant 1 insignificant 0.844858 0.6830949 0.1834507 11 0.694322 0.5736475 0.1206745 2.0528e-17 9.9982e-01 weaklyHypermeth 4.2768e-16 1.0000e+00 weaklyHypermeth 8.3933e-03 9.8816e-01 weaklyHypermeth 5.8287e-02 1.0000e+00 weaklyHypermeth 0.14015895 9.8197e-02 insignificant 5.9155e-01 insignificant 0.845413 0.813545 0.06576299 10 0.749862 0.8038605 -0.05399828 8.9467e-04 7.6081e-01 weaklyHypermeth 2.4735e-02 1.0000e+00 weaklyHypermeth 3.9505e-02 5.7216e-01 weaklyHypermeth 7.9009e-01 1.00000000 insignificant 0.01300604 7.1349e-01 insignificant 1.0000e+00 insignificant 0.863341 0.6834838 0.2090968 12 0.765228 0.5620201 0.2032080 4.7386e-17 9.8512e-01 hypermethylated 1.3163e-15 1.0000e+00 hypermethylated 6.4378e-04 9.8985e-01 hypermethylated 6.1902e-03 1.00000000 hypermethylated 0.1633605 6.2483e-02 insignificant 4.2983e-01 insignificant 0.862028 0.812865 0.07685933 10 0.739823 0.7565746 -0.01675205 1.0907e-04 7.0301e-01 weaklyHypermeth 3.8952e-03 1.0000e+00 weaklyHypermeth 9.1240e-03 8.1742e-01 weaklyHypermeth 2.5345e-01 1.0000e+00 insignificant 0.0362076 2.9530e-01 insignificant 1.00000000 insignificant 0.6842105 0.813915 -0.12852859 10 0.6423087 0.8115549 -0.16924621 9.2946e-01 1.1280e-06 weaklyHypometh 1.0000000 2.0889e-05 weaklyHypometh 0.86229566 3.9776e-02 weaklyHypometh 1.00000 2.8412e-01 insignificant -0.12715292 1.3062e-01 insignificant 8.2154e-01 insignificant chr19 38478733 38479733 150560 SLC7A10 ENSG00000130876 0.912698 84 6 0.805584 80 5 0.850595 37 3 0.7522727 84 4 0.796296 18 0 0.7864371 102 6 0.883333 25 2 0.8541667 66 5 0.959402 38 5 0.808696 47 5 0.697124 96 8 0.400000 18 1 0.9780220 66 5 0.739583 43 5 0.9714286 30 1 NA 0 0 0.000000 5 0 0.8263692 123 6 0.8684807 39 2 0.571429 40 2 0.785220 63 5 0.7853054 60 5 0.816667 19 1 0.912698 53 6 0.9244561 125 6 0.903367 102 8 0.915166 45 5 0.880952 15 0 0.803419 56 6 0.884411 87 8 0.905303 101 8 0.8200146 88 6 0.1396884 158 8 0.0945060 79 3 0.3804348 97 7 0.0827778 140 5 0.376286 98 8 0.0489719 146 8 0.8469388 30 2 0.651042 63 2 0.7846154 31 2 0.398148 29 1 0.7536081 70 6 0.9100529 0.790072 0.667196 0.819697 0.962963 0.7443951 0.829630 0.868056 0.947293 0.8805113 0.852912 0.4000000 0.931624 0.751445 0.911111 NA 0.094038 0.6919580 0.9347443 0.732323 0.781307 0.7427128 0.922252 0.987654 0.895813 0.917093 0.894802 0.962963 0.9069326 0.874022 0.838047 0.8966429 0.1045596 0.0929659 0.1560740 0.0920988 0.358715 0.0251323 0.968254 0.717593 0.7736705 0.530144 0.7069109 0 0.785164 0.877150 -0.08194695 3 0.796650 0.814016 -0.0173664 0.9922061 9.7847e-03 lowCoverage 1 0.542202 lowCoverage 0.9105874 1.4036e-01 lowCoverage 1 1.000000 lowCoverage -1.0026e-01 0.083610 lowCoverage 1 lowCoverage 0.784822 0.1378830 0.6553089 3 0.784833 0.2195993 0.5652339 1.5968e-35 1.0000e+00 lowCoverage 8.5246e-34 1.0000e+00 lowCoverage 6.2473e-13 1.0000e+00 lowCoverage 4.0037e-11 1.0000e+00 lowCoverage 0.57404267 8.0786e-06 lowCoverage 4.2519e-04 lowCoverage 0.784957 0.708520 0.07573321 2 0.774055 0.6601315 0.11392395 3.9395e-02 9.6692e-01 lowCoverage 6.1292e-01 1.0000e+00 lowCoverage 1.3928e-01 9.7441e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.07428312 4.5634e-01 lowCoverage 1.0000e+00 lowCoverage 0.877150 0.1368715 0.7386423 6 0.814016 0.1915593 0.6224570 9.7620e-48 1.0000e+00 hypermethylated 2.4405e-45 1.0000e+00 hypermethylated 2.4380e-14 1.0000e+00 hypermethylated 4.8760e-12 1.00000000 hypermethylated 0.6743041 6.0151e-05 hypermethylated 2.3533e-03 hypermethylated 0.878079 0.708520 0.15069679 2 0.848907 0.6601315 0.18877548 1.3032e-06 9.9717e-01 lowCoverage 8.6879e-05 1.0000e+00 lowCoverage 5.3771e-02 9.8925e-01 lowCoverage 9.6020e-01 1.0000e+00 lowCoverage 0.1745446 9.0557e-02 lowCoverage 1.00000000 lowCoverage 0.1362360 0.708520 -0.58952166 2 0.1850659 0.6601315 -0.47506560 1.0000e+00 3.7863e-12 lowCoverage 1.0000000 1.4563e-10 lowCoverage 0.99999635 7.6371e-06 lowCoverage 1.00000 2.7275e-04 lowCoverage -0.49975955 1.0620e-03 lowCoverage 3.5399e-02 lowCoverage chr19 38572408 38573408 150565 CEBPG ENSG00000153879 0.907782 95 4 0.760340 68 6 0.796118 83 6 0.9714286 38 4 0.896514 76 6 0.9321739 119 6 0.842429 89 6 0.9603175 71 6 0.873823 80 6 0.911210 85 6 0.779524 125 6 0.850595 78 6 0.9839817 84 6 0.900000 11 1 0.8893348 106 5 0.808571 49 5 0.731227 52 5 0.9750000 42 4 0.8265682 89 6 0.894359 110 6 0.894472 78 6 0.6875000 26 2 0.873638 98 6 0.874603 51 6 0.8214286 45 2 0.933333 54 6 0.933598 83 5 0.912169 67 6 0.875126 45 6 0.849879 115 6 0.831532 77 5 0.8753652 135 6 0.4361995 93 6 0.5001680 169 6 0.6500000 65 5 0.6852381 51 3 0.436100 63 6 0.3159701 124 6 0.5971061 67 4 0.952258 142 5 0.8616667 56 4 0.743700 84 4 0.7845238 42 4 0.8775671 0.764547 0.788975 0.963757 0.895135 0.9064454 0.858928 0.976190 0.887376 0.8938750 0.806545 0.8123228 0.976855 0.899468 0.915588 0.7820158 0.879684 0.9702290 0.8403684 0.908164 0.874834 0.7977099 0.854193 0.913268 0.973472 0.984733 0.925348 0.934836 0.9101434 0.886412 0.883105 0.8828391 0.5111210 0.5856516 0.6753650 0.6067648 0.623322 0.4376087 0.754315 0.952350 0.8131043 0.845692 0.8095238 4 0.877261 0.891180 -0.01533089 6 0.876377 0.878806 -0.0024294 0.6230064 2.4286e-01 insignificant 1 1.000000 insignificant 0.4461668 2.7879e-01 insignificant 1 1.000000 insignificant 1.1011e-02 0.665169 insignificant 1 insignificant 0.877261 0.5257549 0.3346245 6 0.876377 0.4720154 0.4043616 1.0269e-32 9.9997e-01 hypermethylated 4.8901e-31 1.0000e+00 hypermethylated 1.3031e-08 9.9986e-01 hypermethylated 3.6197e-07 1.0000e+00 hypermethylated 0.37061897 8.8691e-04 hypermethylated 1.5032e-02 hypermethylated 0.877261 0.869565 0.00655684 4 0.876377 0.7693008 0.10707626 7.0571e-03 7.7692e-01 lowCoverage 1.4702e-01 1.0000e+00 lowCoverage 1.2670e-01 9.8377e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.08671402 2.2361e-01 lowCoverage 1.0000e+00 lowCoverage 0.891180 0.5257549 0.3645797 6 0.878806 0.4720154 0.4067910 9.1647e-27 1.0000e+00 hypermethylated 4.8235e-25 1.0000e+00 hypermethylated 2.3483e-07 1.0000e+00 hypermethylated 5.8707e-06 1.00000000 hypermethylated 0.3596078 9.3627e-04 hypermethylated 1.7023e-02 hypermethylated 0.891180 0.869565 0.03269782 4 0.878806 0.7693008 0.10950566 1.4580e-02 9.3725e-01 lowCoverage 2.6036e-01 1.0000e+00 lowCoverage 7.6244e-02 9.9021e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0757028 2.8137e-01 lowCoverage 1.00000000 lowCoverage 0.5257549 0.869565 -0.29437994 4 0.4720154 0.7693008 -0.29728532 9.9999e-01 3.1419e-08 lowCoverage 1.0000000 8.0560e-07 lowCoverage 0.99310578 7.7424e-03 lowCoverage 1.00000 8.0649e-02 lowCoverage -0.28390495 7.6988e-03 lowCoverage 1.0843e-01 lowCoverage chr19 38572590 38573590 150566 CEBPG ENSG00000153879 0.904539 117 7 0.802638 199 9 0.778793 216 9 0.9440757 82 7 0.789191 155 9 0.9093830 196 9 0.817733 203 9 0.8740837 179 9 0.834351 173 9 0.840575 199 9 0.817426 286 9 0.848087 142 9 0.8986518 199 9 0.923556 50 4 0.8638614 217 8 0.750132 96 9 0.673420 64 6 0.9124579 88 7 0.8767677 253 9 0.872762 187 9 0.789487 159 9 0.6562316 64 5 0.827800 181 9 0.777304 117 9 0.9545455 62 5 0.916835 202 9 0.852275 204 8 0.746376 134 9 0.866425 204 9 0.870794 251 9 0.826577 247 9 0.7685957 222 9 0.3514864 206 9 0.4215056 257 9 0.5673895 184 8 0.7457672 61 4 0.314395 181 9 0.3352975 330 9 0.5457257 129 7 0.796446 202 8 0.7878606 95 7 0.818544 96 4 0.7185471 66 7 0.8597513 0.794833 0.765896 0.902267 0.873223 0.8728287 0.784278 0.859123 0.804740 0.8118679 0.849695 0.7933626 0.867015 0.895128 0.836799 0.7350925 0.722892 0.8585215 0.8963554 0.847864 0.833428 0.7084766 0.807473 0.847081 0.954604 0.913144 0.761186 0.833337 0.8808510 0.864562 0.843588 0.8484269 0.3161537 0.3877599 0.4674705 0.6300652 0.321487 0.2996981 0.643776 0.822961 0.7110791 0.845545 0.6515220 7 0.841563 0.844836 -0.00650884 9 0.834052 0.769477 0.0645756 0.4983358 5.0548e-01 insignificant 1 1.000000 insignificant 0.4502799 7.7504e-01 insignificant 1 1.000000 insignificant 2.5520e-02 0.364837 insignificant 1 insignificant 0.841563 0.3543888 0.4735701 9 0.834052 0.3452912 0.4887610 2.1388e-57 1.0000e+00 hypermethylated 5.3470e-55 1.0000e+00 hypermethylated 1.1786e-09 1.0000e+00 hypermethylated 4.0642e-08 1.0000e+00 hypermethylated 0.39065070 1.9938e-03 weaklyHypermeth 2.8081e-02 weaklyHypermeth 0.841563 0.777211 0.07078642 7 0.834052 0.6692204 0.16483182 4.1782e-07 9.4081e-01 weaklyHypermeth 2.1991e-05 1.0000e+00 weaklyHypermeth 5.3910e-03 9.9615e-01 weaklyHypermeth 1.5403e-01 1.00000000 insignificant 0.11319950 8.4409e-02 insignificant 1.0000e+00 insignificant 0.844836 0.3543888 0.4944774 9 0.769477 0.3452912 0.4241854 2.1840e-40 1.0000e+00 hypermethylated 2.7299e-38 1.0000e+00 hypermethylated 2.0186e-07 1.0000e+00 hypermethylated 5.1759e-06 1.00000000 hypermethylated 0.3651304 2.2513e-03 weaklyHypermeth 3.1709e-02 weaklyHypermeth 0.844836 0.777211 0.08515985 7 0.769477 0.6692204 0.10025625 4.3377e-04 9.9380e-01 weaklyHypermeth 1.3458e-02 1.0000e+00 weaklyHypermeth 3.4157e-02 9.9534e-01 weaklyHypermeth 6.9709e-01 1.0000e+00 insignificant 0.0876792 1.6318e-01 insignificant 1.00000000 insignificant 0.3543888 0.777211 -0.36374922 7 0.3452912 0.6692204 -0.32392918 1.0000e+00 1.1172e-13 hypomethylated 1.0000000 4.6552e-12 hypomethylated 0.99996421 1.4311e-03 weaklyHypometh 1.00000 1.9876e-02 weaklyHypometh -0.27745120 1.0429e-02 weaklyHypometh 1.2363e-01 insignificant chr19 38602326 38603326 150568 CEBPG ENSG00000153879 0.597254 127 5 0.904013 152 3 0.698245 144 5 0.6697246 129 5 0.610912 110 5 0.7035640 359 5 0.677076 134 5 0.6714561 137 5 0.840185 103 3 0.680921 190 5 0.746564 179 3 0.739223 47 3 0.6355652 155 5 0.701369 110 5 0.6691408 188 5 0.653333 41 4 0.496000 127 1 0.6895126 242 5 0.5635535 222 5 0.707402 214 5 0.556245 78 6 0.5633013 95 5 0.734393 120 5 0.665037 107 5 0.8974359 17 1 0.877240 165 3 0.598009 119 5 0.578616 110 5 0.698744 214 5 0.616110 295 5 0.885844 201 3 0.6912985 157 3 0.6642093 150 5 0.6928571 102 5 1.0000000 32 1 0.2333333 14 0 0.753085 177 5 0.9621212 176 3 0.5945701 137 5 0.748611 88 3 0.4879589 165 5 0.698359 66 3 0.6024536 267 5 0.8366838 0.853319 0.799617 0.826739 0.847189 0.7967845 0.852288 0.822296 0.778074 0.8446405 0.866182 0.7433988 0.852928 0.850406 0.799892 0.6843011 0.951845 0.8384885 0.7381380 0.817779 0.716253 0.7882286 0.927188 0.790884 0.777667 0.881200 0.767527 0.816399 0.8346516 0.887702 0.868476 0.9299364 0.8256708 0.7935484 1.0000000 0.0935484 0.911251 0.9466276 0.776514 0.693441 0.7433458 0.895902 0.8090576 2 0.759164 0.781287 -0.00870015 5 0.566004 0.586538 -0.0205334 0.7019994 5.2351e-01 insignificant 1 1.000000 insignificant 0.5358380 6.8107e-01 insignificant 1 1.000000 insignificant -1.4105e-02 0.739566 lowCoverage 1 lowCoverage 0.759408 0.8525346 -0.0637889 5 0.679205 0.7254892 -0.0462840 9.5910e-01 1.6754e-03 weaklyHypometh 1.0000e+00 1.6082e-01 insignificant 6.8691e-01 4.6824e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03485031 7.7161e-01 lowCoverage 1.0000e+00 lowCoverage 0.759408 0.625173 0.08623498 5 0.679205 0.5631215 0.11608368 1.4292e-04 9.6975e-01 weaklyHypermeth 4.9284e-03 1.0000e+00 weaklyHypermeth 1.4532e-03 9.5230e-01 weaklyHypermeth 7.3012e-02 1.00000000 weaklyHypermeth 0.05636013 2.9943e-01 lowCoverage 1.0000e+00 lowCoverage 0.783962 0.8525346 -0.0541238 5 0.675274 0.7254892 -0.0502153 9.6288e-01 1.1883e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.8690e-01 1.3986e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0207449 8.6641e-01 lowCoverage 1.0000e+00 lowCoverage 0.783962 0.625173 0.08122681 5 0.675274 0.5631215 0.11215236 8.2408e-04 9.8524e-01 weaklyHypermeth 2.2272e-02 1.0000e+00 weaklyHypermeth 2.1149e-02 9.2416e-01 weaklyHypermeth 4.9183e-01 1.0000e+00 insignificant 0.0704656 2.5584e-01 lowCoverage 1.00000000 lowCoverage 0.8525346 0.625173 0.12689520 5 0.7254892 0.5631215 0.16236769 8.3880e-04 9.9997e-01 weaklyHypermeth 0.0932002 1.0000e+00 weaklyHypermeth 0.01887392 9.9932e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.09121044 4.7765e-01 lowCoverage 1.0000e+00 lowCoverage chr19 38963462 38964462 150594 CHST8 ENSG00000124302 0.771284 44 5 0.842384 155 7 0.758046 117 6 0.9166667 23 2 0.916170 99 4 0.9523810 43 4 0.720113 100 5 0.8619773 151 4 0.728963 62 5 0.943596 99 5 0.868623 225 7 0.660317 37 5 0.8395190 130 5 1.000000 1 0 0.8074308 77 5 0.966667 20 3 0.850000 14 0 1.0000000 3 0 0.9558123 113 5 0.908095 53 5 0.869048 41 2 0.0000000 3 0 0.933846 96 5 0.972727 57 5 1.0000000 9 1 0.929555 190 6 0.863203 49 5 0.847619 30 5 0.899427 176 4 0.949792 216 6 0.854678 169 6 0.8925776 99 5 0.0812029 244 5 0.0000000 110 5 0.0000000 50 3 0.4285714 21 1 0.135952 71 6 0.3409698 212 6 0.7000000 34 3 0.617739 54 4 0.3333333 12 0 0.933333 9 0 1.0000000 13 0 0.7548959 0.787240 0.695950 0.880952 0.841235 0.9153439 0.744450 0.849327 0.724956 0.9328525 0.855822 0.5850340 0.880380 NA 0.761227 0.9603175 0.880952 0.9727697 0.9606843 0.890590 0.781746 0.2767732 0.905495 0.954545 0.842024 0.930211 0.891053 0.858277 0.8495216 0.935895 0.801685 0.9697723 0.0080803 0.0000000 0.1238044 0.3809524 0.154841 0.3065766 0.595238 0.672423 0.0714286 0.920635 1.0000000 0 0.819923 0.889868 -0.07160303 5 0.844049 0.909490 -0.0654417 0.9999679 1.4802e-03 weaklyHypometh 1 0.134559 insignificant 0.9775582 2.2521e-01 insignificant 1 1.000000 insignificant 2.9029e-02 0.723217 lowCoverage 1 lowCoverage 0.819923 0.1299435 0.6810354 5 0.844049 0.1745153 0.6695335 5.9086e-48 1.0000e+00 hypermethylated 6.5651e-46 1.0000e+00 hypermethylated 1.5981e-14 1.0000e+00 hypermethylated 1.5981e-12 1.0000e+00 hypermethylated 0.69895283 1.0795e-04 lowCoverage 2.8407e-03 lowCoverage 0.819923 0.721311 0.10221567 3 0.844049 0.7543116 0.08973716 7.9246e-03 8.4455e-01 lowCoverage 1.5849e-01 1.0000e+00 lowCoverage 2.6932e-01 8.9192e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.14652103 2.8932e-01 lowCoverage 1.0000e+00 lowCoverage 0.889868 0.1299435 0.7497886 5 0.909490 0.1745153 0.7349752 1.5939e-45 1.0000e+00 hypermethylated 3.1878e-43 1.0000e+00 hypermethylated 1.6615e-11 1.0000e+00 hypermethylated 9.7737e-10 1.00000000 hypermethylated 0.6699234 1.8836e-05 lowCoverage 9.6333e-04 lowCoverage 0.889868 0.721311 0.17229035 3 0.909490 0.7543116 0.15517884 3.0723e-05 9.8845e-01 lowCoverage 1.3965e-03 1.0000e+00 lowCoverage 7.6451e-02 9.4683e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1174916 4.3328e-01 lowCoverage 1.00000000 lowCoverage 0.1299435 0.721311 -0.57299126 3 0.1745153 0.7543116 -0.57979637 1.0000e+00 4.4194e-15 lowCoverage 1.0000000 2.4552e-13 lowCoverage 0.99995531 8.0895e-05 lowCoverage 1.00000 1.9261e-03 lowCoverage -0.55243181 5.8523e-03 lowCoverage 9.2894e-02 lowCoverage chr19 40972678 40973678 150642 SNX26 ENSG00000004777 0.888533 224 6 0.813312 139 6 0.871118 168 6 0.8657956 304 6 0.924506 106 6 0.8789637 319 6 0.838149 137 6 0.9237339 172 6 0.848332 158 6 0.936677 194 6 0.897140 161 6 0.919048 73 6 0.9271456 244 6 0.915904 114 5 0.8700732 224 6 0.822650 49 3 0.875000 45 3 0.9133679 368 6 0.9660920 150 6 0.889661 247 6 0.796111 82 6 0.8587901 158 6 0.813178 249 6 0.902467 117 6 0.9800619 155 6 0.973091 189 6 0.845831 140 6 0.831710 90 6 0.918840 203 6 0.919247 206 6 0.976069 182 6 0.8599101 285 6 0.8221085 145 6 0.7967749 131 6 1.0000000 138 4 0.8621212 36 3 0.867902 111 6 0.9229477 188 6 0.9357298 266 6 0.963297 248 6 0.9424892 249 6 0.927482 299 6 0.9328137 281 6 0.8951874 0.780989 0.860413 0.862482 0.907512 0.8777882 0.851204 0.919219 0.838897 0.9242028 0.910238 0.8901006 0.925773 0.898319 0.850298 0.7993138 0.845070 0.9105141 0.9700604 0.901510 0.802938 0.8447380 0.801457 0.919760 0.977776 0.967631 0.859621 0.830035 0.9256502 0.915934 0.975851 0.9208765 0.8144101 0.8353169 0.9368214 0.8265813 0.860173 0.9228554 0.925225 0.965754 0.9307031 0.911092 0.9441849 6 0.888487 0.900292 -0.01190228 6 0.907316 0.843506 0.0638109 0.8987064 1.7678e-01 insignificant 1 1.000000 insignificant 0.9142117 1.5490e-01 insignificant 1 1.000000 insignificant -3.4877e-04 0.986785 insignificant 1 insignificant 0.888425 0.8878505 0.0014331 6 0.891869 0.8827775 0.0090917 5.3926e-02 5.2664e-01 insignificant 2.5802e-01 1.0000e+00 insignificant 1.8269e-01 1.0950e-01 insignificant 8.4973e-01 1.0000e+00 insignificant 0.01061766 7.4608e-01 insignificant 1.0000e+00 insignificant 0.888425 0.933730 -0.04565166 6 0.891869 0.9373807 -0.04551152 9.9956e-01 1.4507e-02 weaklyHypometh 1.0000e+00 5.7904e-01 insignificant 9.9954e-01 9.9278e-03 weaklyHypometh 1.0000e+00 0.62048583 insignificant -0.05110232 1.4311e-04 weaklyHypometh 2.0444e-02 weaklyHypometh 0.900682 0.8878505 0.0139255 6 0.900756 0.8827775 0.0179790 9.8430e-02 8.9379e-01 insignificant 4.5152e-01 1.0000e+00 insignificant 2.0929e-01 5.3498e-01 insignificant 9.9189e-01 1.00000000 insignificant 0.0109664 7.6340e-01 insignificant 1.0000e+00 insignificant 0.900682 0.933730 -0.03270319 6 0.900756 0.9373807 -0.03662420 9.2011e-01 1.3424e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7626e-01 1.7969e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0507535 2.2977e-02 weaklyHypometh 0.62099097 insignificant 0.8878505 0.933730 -0.04584528 6 0.8827775 0.9373807 -0.05460319 9.5788e-01 1.3100e-02 weaklyHypometh 1.0000000 8.6755e-02 weaklyHypometh 0.68258033 9.7922e-02 insignificant 1.00000 6.0075e-01 insignificant -0.06171997 9.5498e-02 insignificant 6.4525e-01 insignificant chr19 41293507 41294507 150648 ENSG00000105261 0.717085 111 6 0.746041 268 7 0.574349 165 7 0.6981110 342 7 0.672857 132 7 0.6594354 298 9 0.866548 198 7 0.6522758 326 7 0.753708 143 7 0.790414 118 7 0.758360 374 9 0.505310 110 6 0.4674306 319 7 0.597920 96 4 0.5561707 226 7 0.766667 35 2 0.532384 107 4 0.5422798 285 9 0.5455599 247 7 0.456953 300 9 0.668729 144 7 0.3670847 172 7 0.719403 227 7 0.412545 130 10 0.5472938 166 9 0.670562 346 7 0.406973 155 7 0.525552 92 5 0.641257 347 7 0.367516 414 8 0.479900 333 7 0.8290903 312 9 0.6491183 293 9 0.7918274 297 9 0.5000000 193 3 0.5155729 92 5 0.512739 182 7 0.7512050 294 9 0.4170326 101 6 0.559621 362 7 0.4678146 279 7 0.653521 194 6 0.6388208 227 9 0.6411150 0.623093 0.669298 0.590805 0.664017 0.6725748 0.847022 0.620850 0.742291 0.7479316 0.800266 0.6663929 0.280376 0.615332 0.523673 0.7963983 0.535406 0.5206744 0.4823498 0.455287 0.809952 0.3458750 0.735334 0.457985 0.528051 0.467031 0.503245 0.801300 0.6162078 0.428284 0.338610 0.8066118 0.7328268 0.8551080 0.7896872 0.5547896 0.586224 0.4734678 0.360686 0.387061 0.3366956 0.434927 0.3633875 3 0.634327 0.604864 0.03877356 7 0.502457 0.447930 0.0545267 0.3335328 9.9985e-01 insignificant 1 1.000000 insignificant 0.2754220 9.9972e-01 insignificant 1 1.000000 insignificant 9.0001e-02 0.095214 insignificant 1 insignificant 0.634519 0.7113249 -0.0910014 7 0.541485 0.5374761 0.0040089 4.8078e-01 4.5024e-04 weaklyHypometh 1.0000e+00 5.6280e-02 weaklyHypometh 3.6867e-01 1.9022e-03 weaklyHypometh 1.0000e+00 2.7174e-01 insignificant 0.02291586 7.0932e-01 insignificant 1.0000e+00 insignificant 0.637105 0.483233 0.15129175 7 0.644148 0.6352548 0.00889360 2.3033e-05 9.7637e-01 weaklyHypermeth 1.0014e-03 1.0000e+00 weaklyHypermeth 1.1879e-04 9.7345e-01 weaklyHypermeth 7.9196e-03 1.00000000 weaklyHypermeth 0.09563094 1.1726e-01 insignificant 1.0000e+00 insignificant 0.605579 0.7113249 -0.1071177 7 0.474375 0.5374761 -0.0631009 9.7113e-01 1.5830e-04 weaklyHypometh 1.0000e+00 2.2614e-02 weaklyHypometh 9.4347e-01 2.1650e-03 weaklyHypometh 1.0000e+00 0.30928977 insignificant -0.0670850 3.4982e-01 insignificant 1.0000e+00 insignificant 0.609036 0.483233 0.09095814 7 0.579696 0.6352548 -0.05555887 3.8270e-02 9.3883e-01 weaklyHypermeth 5.6279e-01 1.0000e+00 insignificant 1.8740e-02 8.8103e-01 weaklyHypermeth 4.5456e-01 1.0000e+00 insignificant 0.0056301 9.3139e-01 insignificant 1.00000000 insignificant 0.7182362 0.482343 0.24583493 7 0.6987189 0.5623057 0.13641319 1.0991e-05 9.9560e-01 hypermethylated 0.0027477 1.0000e+00 hypermethylated 0.00260477 9.9877e-01 weaklyHypermeth 0.81898 1.0000e+00 insignificant 0.07271508 3.2918e-01 insignificant 1.0000e+00 insignificant chr19 43181724 43182724 150661 SIPA1L3 ENSG00000105738 0.913951 287 6 0.766536 208 6 0.889706 87 6 0.9371658 230 6 1.000000 70 6 0.9123669 431 6 0.838624 47 6 0.9668734 237 6 0.853801 109 6 0.879651 98 6 0.875983 232 6 0.583333 21 3 0.9323243 245 6 0.864258 145 6 0.8014935 193 6 0.750000 31 3 1.000000 6 0 0.5589990 371 6 0.9377543 226 6 0.947277 236 6 0.916667 38 3 0.7480866 93 6 0.951669 174 6 0.924363 104 6 0.7181373 87 6 0.904387 322 6 0.878815 104 6 0.928571 49 6 0.876127 197 6 0.933123 370 6 0.946808 308 6 0.9061632 288 6 0.0423941 231 6 0.1090294 89 6 0.0000000 27 3 0.0000000 15 3 0.178290 234 6 0.0000000 236 6 0.8579569 142 6 0.845018 190 6 0.9293412 236 6 0.851780 170 6 0.9129125 171 6 0.9103274 0.769049 0.894986 0.944495 1.000000 0.9145243 0.865040 0.966092 0.873323 0.8627708 0.881753 0.5641791 0.935662 0.870510 0.796553 0.8009950 0.929815 0.5635996 0.9365039 0.947763 0.894030 0.7631689 0.957692 0.915218 0.711223 0.898990 0.894383 0.944563 0.8744863 0.935787 0.946328 0.9083417 0.0478932 0.1043225 0.0293033 0.0110259 0.049430 0.0000000 0.857280 0.817743 0.9202983 0.843126 0.9096545 6 0.862924 0.905811 -0.04279854 6 0.863312 0.905596 -0.0422848 0.9978881 3.1352e-02 weaklyHypometh 1 0.870901 insignificant 0.8173781 2.5011e-01 insignificant 1 1.000000 insignificant -2.5572e-02 0.465487 insignificant 1 insignificant 0.862963 0.0324519 0.8303697 6 0.882838 0.1714083 0.7114301 7.1344e-62 1.0000e+00 hypermethylated 2.3781e-59 1.0000e+00 hypermethylated 1.0914e-13 1.0000e+00 hypermethylated 7.7956e-12 1.0000e+00 hypermethylated 0.80555266 1.4754e-11 hypermethylated 3.6884e-09 hypermethylated 0.862924 0.874587 -0.01423367 6 0.863312 0.8805711 -0.01725961 7.3224e-01 2.5296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2232e-01 2.3900e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01889679 5.6110e-01 insignificant 1.0000e+00 insignificant 0.905811 0.0312876 0.8735104 6 0.905596 0.0333097 0.8722866 2.8980e-69 1.0000e+00 hypermethylated 9.6600e-67 1.0000e+00 hypermethylated 6.4133e-13 1.0000e+00 hypermethylated 6.4133e-11 1.00000000 hypermethylated 0.8311243 4.7426e-10 hypermethylated 1.5809e-07 hypermethylated 0.905811 0.874587 0.02782024 6 0.905596 0.8805711 0.02502521 3.5492e-02 6.7273e-01 weaklyHypermeth 5.4116e-01 1.0000e+00 insignificant 1.1813e-01 6.2800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0066748 8.1399e-01 insignificant 1.00000000 insignificant 0.0312876 0.874587 -0.84752539 6 0.0333097 0.8805711 -0.84726142 1.0000e+00 1.0645e-41 hypomethylated 1.0000000 3.5484e-39 hypomethylated 1.00000000 8.6301e-09 hypomethylated 1.00000 1.0788e-06 hypomethylated -0.82444945 1.5531e-08 hypomethylated 1.5531e-05 hypomethylated chr19 43245514 43246514 150662 ENSG00000221258 0.676882 160 7 0.736970 161 6 0.638808 169 10 0.8570810 109 8 0.958333 67 6 0.9065619 200 7 0.888939 104 7 0.8105867 133 7 0.836983 111 5 0.953582 131 7 0.828194 226 8 0.787019 59 4 0.5360260 175 5 1.000000 8 0 0.6210317 65 4 0.868445 57 3 0.482568 71 5 0.5481988 86 7 0.7617364 111 5 0.808401 161 7 0.918110 85 7 0.3587302 54 5 0.773300 130 7 0.797222 40 3 0.7118288 49 4 0.932797 192 9 0.780486 89 7 0.839103 59 3 0.790027 161 5 0.836006 245 12 0.791323 256 8 0.9031353 289 9 0.5164798 149 6 0.4594906 176 6 0.7153110 136 5 0.6077131 130 8 0.479026 70 7 0.5059321 220 8 0.3534771 207 9 0.535055 246 8 0.6462662 96 9 0.439866 126 5 0.6106206 189 11 0.7190771 0.781957 0.590809 0.885591 0.906497 0.7923681 0.817965 0.726990 0.776450 0.9046545 0.765290 0.7035589 0.552083 0.723375 0.628567 0.7764190 0.521643 0.3964837 0.7041847 0.665098 0.914045 0.4130589 0.847129 0.783242 0.623702 0.803842 0.777647 0.847835 0.7810188 0.729772 0.644308 0.8355747 0.4861384 0.3483172 0.6133005 0.5008390 0.752537 0.5588733 0.332256 0.377627 0.3105854 0.240601 0.4582455 3 0.745023 0.778385 -0.04178526 7 0.746497 0.865555 -0.1190575 0.9996570 2.8317e-02 weaklyHypometh 1 0.815474 insignificant 0.9867118 3.9444e-01 insignificant 1 1.000000 insignificant -1.0688e-02 0.846196 insignificant 1 insignificant 0.745347 0.5433790 0.2295549 7 0.763397 0.5775690 0.1858283 1.8642e-11 1.0000e+00 hypermethylated 2.3598e-10 1.0000e+00 hypermethylated 4.4901e-05 1.0000e+00 hypermethylated 5.7565e-04 1.0000e+00 hypermethylated 0.22799187 7.1603e-04 hypermethylated 1.3858e-02 hypermethylated 0.745023 0.431555 0.34355231 7 0.746497 0.5342650 0.21223213 2.0727e-17 9.9994e-01 hypermethylated 4.1455e-15 1.0000e+00 hypermethylated 1.1123e-09 1.0000e+00 hypermethylated 3.7078e-07 1.00000000 hypermethylated 0.25826047 4.2693e-03 weaklyHypermeth 1.6421e-01 insignificant 0.778047 0.5437998 0.2764534 7 0.819860 0.5414709 0.2783894 5.2000e-13 1.0000e+00 hypermethylated 9.8113e-12 1.0000e+00 hypermethylated 1.6506e-05 1.0000e+00 hypermethylated 2.5395e-04 1.00000000 hypermethylated 0.2386802 1.0477e-03 weaklyHypermeth 1.8008e-02 weaklyHypermeth 0.778385 0.431555 0.40573861 7 0.865555 0.5342650 0.33128966 1.3525e-20 1.0000e+00 hypermethylated 4.5084e-18 1.0000e+00 hypermethylated 9.6003e-10 1.0000e+00 hypermethylated 9.6003e-07 1.0000e+00 hypermethylated 0.2689488 3.4410e-03 weaklyHypermeth 0.24271475 insignificant 0.5428571 0.431555 0.14349828 7 0.5473953 0.5342650 0.01313035 2.4871e-03 5.9406e-01 weaklyHypermeth 0.2260972 1.0000e+00 insignificant 0.03787629 9.3143e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.03026860 6.6391e-01 insignificant 1.0000e+00 insignificant chr19 43263433 43264433 150663 ENSG00000221258 0.812801 94 7 0.750000 31 5 0.483333 33 2 0.8196825 69 6 0.511905 36 3 0.6691358 62 6 0.500000 22 2 0.6043651 62 7 0.166667 11 0 0.546429 29 3 0.772811 164 7 0.356463 45 4 0.6845238 30 2 0.442651 43 3 0.4887821 33 2 0.192460 30 2 NA 0 0 0.6500000 81 1 1.0000000 48 6 0.916667 42 6 0.875000 37 6 0.8095238 36 1 0.714006 85 6 0.757143 23 1 0.8511364 67 6 0.755592 50 5 0.791667 20 0 0.500000 16 0 0.615110 64 7 0.817687 72 5 0.744318 59 5 0.8154762 62 6 0.7552083 42 5 0.7690972 53 6 0.0000000 6 0 0.7876984 47 6 0.716667 31 3 0.8257457 72 6 1.0000000 26 1 0.805556 65 6 0.7298920 52 6 0.153846 40 1 0.9696970 60 6 0.8185328 1.000000 0.486486 0.924925 0.554054 0.9189189 0.414414 0.696911 0.142494 0.3479730 0.914182 0.3294723 0.729730 0.310811 0.364518 0.0776497 NA 0.7635135 1.0000000 0.864865 1.000000 0.8648649 0.781664 0.918919 0.960442 0.735087 1.000000 0.662162 0.5840997 0.907336 0.869779 0.9155405 0.9493243 0.8761261 0.3141892 0.9192943 1.000000 0.9212949 1.000000 0.957958 0.8416988 0.150394 0.9729730 0 0.685358 0.830508 -0.09522412 6 0.628169 0.731412 -0.1032422 0.8887493 5.2537e-03 weaklyHypometh 1 0.343070 insignificant 0.9585527 3.2704e-04 weaklyHypometh 1 0.163518 insignificant -1.5554e-01 0.014758 lowCoverage 1 lowCoverage 0.684647 0.8840000 -0.1387221 5 0.558373 0.7348683 -0.1764955 9.9951e-01 1.7691e-03 weaklyHypometh 1.0000e+00 1.6082e-01 insignificant 9.9987e-01 2.1596e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04405136 7.6130e-01 lowCoverage 1.0000e+00 lowCoverage 0.684647 0.843621 -0.05455191 6 0.558373 0.6898243 -0.13145150 5.8609e-02 6.2003e-01 insignificant 8.8801e-01 1.0000e+00 insignificant 4.7519e-01 6.1474e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.13344677 4.4639e-01 lowCoverage 1.0000e+00 lowCoverage 0.829103 0.8866397 -0.0436620 5 0.650144 0.6793127 -0.0291692 9.6100e-01 6.1217e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0528e-01 2.3374e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1114855 4.3593e-01 lowCoverage 1.0000e+00 lowCoverage 0.830508 0.842975 0.03015020 6 0.731412 0.6510523 0.08035923 2.9876e-02 9.4243e-01 weaklyHypermeth 4.8977e-01 1.0000e+00 insignificant 1.5261e-01 9.6725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0220901 8.9373e-01 lowCoverage 1.00000000 lowCoverage 0.8840000 0.843621 0.06436752 5 0.7348683 0.6898243 0.04504404 1.2911e-01 9.5368e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.26890199 9.6638e-01 insignificant 1.00000 1.0000e+00 insignificant -0.08939541 6.6674e-01 lowCoverage 1.0000e+00 lowCoverage chr19 43322406 43323406 150664 ENSG00000221258 0.702906 272 8 0.638318 215 6 0.558359 141 6 0.7416916 172 8 0.521006 90 6 0.6234587 281 7 0.643556 171 4 0.6472898 144 7 0.618750 74 6 0.796296 45 3 0.741154 302 6 0.539773 40 3 0.8482143 111 6 0.421190 61 3 0.7027820 112 6 0.579545 44 3 0.688081 410 3 0.8469826 179 6 0.8252688 55 4 0.715794 147 8 0.600826 74 3 0.4708333 52 5 0.713002 147 6 0.496897 82 6 0.6088128 98 6 0.637612 158 8 0.613031 123 8 0.681624 28 3 0.639110 88 5 0.730518 164 6 0.669248 125 7 0.6876689 280 8 0.6475558 181 7 0.6517092 119 6 0.5236951 79 6 0.4500000 21 3 0.575747 194 6 0.5564252 150 8 0.7513227 355 3 0.790471 319 7 0.6363821 211 8 0.729408 198 3 0.7271214 321 8 0.8461920 0.697589 0.744435 0.837816 0.709099 0.7329555 0.712370 0.818617 0.800338 0.8932629 0.819160 0.7606714 0.868286 0.725741 0.889667 0.8200277 0.897598 0.8989843 0.9276513 0.844515 0.656453 0.4825719 0.884135 0.632104 0.646853 0.800882 0.740935 0.719343 0.7553223 0.817561 0.762657 0.8087138 0.7803341 0.5269108 0.5411798 0.5126904 0.794725 0.7096643 0.841341 0.862300 0.7982413 0.858646 0.8446289 3 0.807567 0.747710 0.04647896 6 0.685944 0.645101 0.0408427 0.0349196 8.4871e-01 weaklyHypermeth 1 1.000000 insignificant 0.0063404 5.5834e-01 weaklyHypermeth 1 1.000000 insignificant 4.0922e-02 0.241970 insignificant 1 insignificant 0.807567 0.6854839 0.1098483 6 0.685944 0.5962842 0.0896599 1.4534e-03 9.8444e-01 weaklyHypermeth 9.0274e-03 1.0000e+00 weaklyHypermeth 1.4860e-04 9.5638e-01 weaklyHypermeth 1.6152e-03 1.0000e+00 weaklyHypermeth 0.10249878 2.5463e-02 weaklyHypermeth 2.0872e-01 insignificant 0.807567 0.827635 -0.01413328 6 0.685944 0.7251114 -0.03916735 8.3805e-01 2.0142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9478e-01 2.7308e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05692023 1.3660e-01 insignificant 1.0000e+00 insignificant 0.747710 0.6854839 0.0609435 6 0.645101 0.5962842 0.0488171 8.1467e-02 9.6327e-01 insignificant 3.8610e-01 1.0000e+00 insignificant 1.2834e-01 9.6223e-01 insignificant 6.4169e-01 1.00000000 insignificant 0.0615766 1.4234e-01 insignificant 8.1806e-01 insignificant 0.747710 0.827635 -0.06993072 6 0.645101 0.7251114 -0.08001006 9.0628e-01 1.1663e-02 weaklyHypometh 1.0000e+00 7.2893e-01 insignificant 7.9490e-01 1.7425e-02 weaklyHypometh 1.0000e+00 9.1712e-01 insignificant -0.0978425 1.5888e-02 weaklyHypometh 0.51250765 insignificant 0.6854839 0.827635 -0.12937228 6 0.5962842 0.7251114 -0.12882720 9.8246e-01 1.6970e-04 weaklyHypometh 1.0000000 1.8648e-03 weaklyHypometh 0.99089543 7.5179e-05 weaklyHypometh 1.00000 1.8336e-03 weaklyHypometh -0.15941901 3.3786e-03 weaklyHypometh 6.7571e-02 weaklyHypometh chr19 43399263 43400263 150667 ENSG00000209983 0.658271 293 14 0.601660 348 19 0.672534 497 18 0.7222552 240 13 0.754663 202 16 0.7771880 514 18 0.787927 362 15 0.7497539 399 18 0.787262 313 17 0.694174 305 17 0.722040 497 20 0.641344 264 16 0.7013144 359 18 0.850000 101 5 0.8611239 358 18 0.464419 191 11 0.662755 141 10 0.7617220 280 15 0.7759540 419 16 0.739647 477 15 0.690347 195 17 0.4836280 249 14 0.697213 318 18 0.624280 255 15 0.7993277 175 11 0.844829 458 20 0.635313 355 19 0.608397 179 12 0.726904 318 15 0.757430 476 20 0.725275 533 20 0.6994460 508 20 0.3392703 362 20 0.4925373 348 19 0.3588279 242 10 0.6097567 157 12 0.333893 252 17 0.5779970 465 19 0.6034979 350 13 0.627719 343 19 0.7614272 252 14 0.571688 353 13 0.7395329 285 10 0.7672968 0.599224 0.635097 0.764819 0.730146 0.8264689 0.743905 0.701834 0.686942 0.6708031 0.698672 0.6153179 0.733551 0.741158 0.821441 0.4980650 0.674694 0.7715419 0.7833353 0.728175 0.617362 0.6080015 0.747881 0.682326 0.787210 0.814677 0.569703 0.607627 0.7203599 0.702798 0.710017 0.7611519 0.3695688 0.5077809 0.3915962 0.5251578 0.391225 0.6269766 0.681510 0.755121 0.7726610 0.727737 0.7113428 6 0.751029 0.709132 0.01889091 17 0.715856 0.678224 0.0376313 0.1092925 9.2911e-01 insignificant 1 1.000000 insignificant 0.3249005 8.8473e-01 insignificant 1 1.000000 insignificant 2.8268e-02 0.414799 insignificant 1 insignificant 0.751067 0.4611172 0.2848940 17 0.728210 0.3997286 0.3284811 4.4688e-55 9.9999e-01 hypermethylated 8.9376e-53 1.0000e+00 hypermethylated 1.2121e-18 9.9998e-01 hypermethylated 2.4241e-16 1.0000e+00 hypermethylated 0.26725332 2.0829e-03 weaklyHypermeth 2.8929e-02 weaklyHypermeth 0.751029 0.722678 0.01132972 10 0.715856 0.6241547 0.09170088 3.0718e-09 1.6372e-01 weaklyHypermeth 2.3629e-07 1.0000e+00 weaklyHypermeth 3.5759e-03 6.6898e-02 weaklyHypermeth 1.2489e-01 1.00000000 insignificant 0.05852740 2.1740e-01 insignificant 1.0000e+00 insignificant 0.709132 0.4613699 0.2621222 20 0.678224 0.4178981 0.2603262 3.1615e-40 9.9895e-01 hypermethylated 3.2353e-38 1.0000e+00 hypermethylated 9.5377e-15 9.9985e-01 hypermethylated 2.3844e-12 1.00000000 hypermethylated 0.2389854 3.2675e-03 weaklyHypermeth 4.1891e-02 weaklyHypermeth 0.709132 0.722678 -0.04100692 12 0.678224 0.6241547 0.05406957 2.3457e-06 7.8874e-03 weaklyHypometh 1.4661e-04 5.2583e-01 weaklyHypometh 2.5457e-02 3.7064e-02 weaklyHypometh 5.7856e-01 1.0000e+00 insignificant 0.0302595 5.3481e-01 insignificant 1.00000000 insignificant 0.4613699 0.722678 -0.22388160 12 0.4178981 0.6241547 -0.20625661 1.0000e+00 1.6749e-10 hypomethylated 1.0000000 5.5830e-09 hypomethylated 0.99999688 1.9861e-07 hypomethylated 1.00000 1.5278e-05 hypomethylated -0.20872592 9.7761e-03 weaklyHypometh 1.2069e-01 insignificant chr19 43865757 43866757 150679 ACTN4 ENSG00000130402 0.555233 309 5 0.211799 490 6 0.231238 248 6 0.6102365 257 6 0.305082 137 6 0.5615856 419 6 0.226400 334 6 0.2779235 262 6 0.172655 262 6 0.375498 160 6 0.508394 340 6 0.188589 138 5 0.1248089 185 6 0.336310 44 3 0.3456495 197 6 0.545455 80 4 0.315843 123 4 0.2421652 280 5 0.0773916 162 6 0.370772 386 6 0.306684 103 6 0.3810568 75 3 0.605348 150 5 0.407143 122 5 0.2671296 67 4 0.266676 500 6 0.191355 144 6 0.236270 72 5 0.336856 301 5 0.210742 519 6 0.307098 490 6 0.3396005 476 6 0.1193872 318 6 0.2810197 121 5 0.0000000 247 5 0.0000000 28 3 0.248792 257 6 0.0124246 515 6 0.5536121 273 5 0.542644 332 5 0.5194625 170 5 0.494113 233 5 0.5357296 242 5 0.4716027 0.227700 0.229784 0.620589 0.298640 0.5903306 0.266419 0.282616 0.227424 0.3911978 0.545769 0.1646150 0.138704 0.398595 0.377084 0.5136107 0.254618 0.2464308 0.0657537 0.409546 0.306298 0.4247306 0.552107 0.519976 0.251491 0.288628 0.210083 0.100662 0.4330571 0.242582 0.322589 0.3745181 0.1132176 0.1849450 0.0057910 0.0000000 0.162767 0.0117634 0.642130 0.533755 0.6136510 0.458711 0.6486405 4 0.323914 0.297449 0.01494343 6 0.328801 0.308064 0.0207370 0.4033286 9.0631e-01 insignificant 1 1.000000 insignificant 0.6551551 6.9139e-01 insignificant 1 1.000000 insignificant 7.8216e-03 0.869778 insignificant 1 insignificant 0.323914 0.0605653 0.2557800 5 0.328801 0.0940374 0.2347639 1.0591e-10 1.0000e+00 hypermethylated 1.2460e-09 1.0000e+00 hypermethylated 1.4940e-10 1.0000e+00 hypermethylated 6.6482e-09 1.0000e+00 hypermethylated 0.21888076 6.0255e-03 weaklyHypermeth 6.2766e-02 weaklyHypermeth 0.323914 0.572000 -0.23797047 5 0.328801 0.5396282 -0.21082690 1.0000e+00 9.8375e-09 hypomethylated 1.0000e+00 9.8375e-06 hypomethylated 9.9878e-01 1.7232e-07 hypomethylated 1.0000e+00 0.00017232 hypomethylated -0.19996094 1.6605e-05 weaklyHypometh 5.1180e-03 weaklyHypometh 0.297449 0.0605653 0.2351841 5 0.308064 0.0940374 0.2140270 2.5453e-16 1.0000e+00 hypermethylated 6.2080e-15 1.0000e+00 hypermethylated 1.1366e-08 9.9999e-01 hypermethylated 4.0592e-07 1.00000000 hypermethylated 0.2110591 7.5744e-03 weaklyHypermeth 7.7290e-02 weaklyHypermeth 0.297449 0.572000 -0.25189577 5 0.308064 0.5396282 -0.23156387 1.0000e+00 3.4607e-16 hypomethylated 1.0000e+00 3.4607e-13 hypomethylated 9.9970e-01 4.7563e-08 hypomethylated 1.0000e+00 4.7563e-05 hypomethylated -0.2077826 3.2636e-05 hypomethylated 0.01087854 hypomethylated 0.0605653 0.572000 -0.50059751 5 0.0940374 0.5396282 -0.44559083 1.0000e+00 5.6231e-24 hypomethylated 1.0000000 1.1246e-21 hypomethylated 0.99967336 8.1886e-08 hypomethylated 1.00000 7.4442e-06 hypomethylated -0.41884170 3.8176e-04 hypomethylated 1.7878e-02 hypomethylated chr19 43893279 43894279 150681 ACTN4 ENSG00000130402 0.904213 161 7 0.792646 183 9 0.756762 73 4 0.7995933 155 9 0.896499 78 7 0.9596835 170 7 0.719854 111 5 0.7589803 136 7 0.878322 98 6 0.923557 89 7 0.921398 265 8 0.809524 34 2 0.8679042 129 6 0.653846 35 4 0.8556151 107 7 0.533333 24 1 1.000000 11 0 0.6553323 154 8 0.9443247 189 9 0.856597 115 6 0.955642 128 5 0.6558884 47 3 0.861032 106 7 0.884712 65 3 0.8349282 109 4 0.829029 203 9 0.838826 92 4 0.831019 88 4 0.864076 166 8 0.764726 147 8 0.949606 165 8 0.6231687 175 7 0.7428952 137 4 0.7058232 133 7 0.7500000 146 2 0.7949924 112 4 0.562893 68 4 0.7819756 179 9 0.7753053 85 4 0.748237 139 10 0.6329210 106 7 0.778393 88 4 0.8674603 109 7 0.9088742 0.777918 0.687277 0.927456 0.907772 0.9241851 0.836472 0.895993 0.967728 0.9403394 0.909255 0.8308703 0.904877 0.945981 0.932723 0.8165481 0.974682 0.6956899 0.9302923 0.880827 0.868381 0.7255457 0.916158 0.944905 0.872830 0.891110 0.815657 0.799968 0.9070604 0.911921 0.907330 0.8601248 0.5907089 0.5424491 0.5616722 0.7409857 0.539647 0.6289199 0.784955 0.716829 0.7983032 0.756808 0.8420361 2 0.874672 0.880728 -0.00157746 7 0.826769 0.606680 0.2200883 0.8971866 6.9144e-01 insignificant 1 1.000000 insignificant 0.6360375 8.8836e-01 insignificant 1 1.000000 insignificant 1.1569e-05 0.999768 insignificant 1 insignificant 0.875782 0.5730918 0.3078561 4 0.820562 0.6734575 0.1471047 1.6035e-18 8.8635e-01 lowCoverage 3.4860e-17 1.0000e+00 lowCoverage 9.8497e-04 9.1665e-01 lowCoverage 8.5649e-03 1.0000e+00 lowCoverage 0.10130276 3.8778e-02 weaklyHypermeth 2.9156e-01 insignificant 0.876253 0.789374 0.07728126 5 0.833388 0.7620587 0.07132974 1.8992e-02 9.8417e-01 weaklyHypermeth 3.2190e-01 1.0000e+00 insignificant 1.9443e-01 9.7409e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.06393591 2.0022e-01 insignificant 1.0000e+00 insignificant 0.888889 0.5716129 0.2937831 6 0.774408 0.6216531 0.1527549 3.2731e-11 9.5134e-01 hypermethylated 4.6758e-10 1.0000e+00 hypermethylated 3.0248e-03 9.6084e-01 weaklyHypermeth 2.5853e-02 1.00000000 weaklyHypermeth 0.1012912 4.4761e-02 weaklyHypermeth 3.2913e-01 insignificant 0.885424 0.784000 0.08809598 5 0.714683 0.7536034 -0.03892040 1.7878e-02 9.9676e-01 weaklyHypermeth 3.0939e-01 1.0000e+00 insignificant 1.5209e-01 9.9007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0639243 2.1249e-01 insignificant 1.00000000 insignificant 0.5729167 0.784314 -0.23573458 2 0.6748156 0.7710301 -0.09621441 8.5581e-01 3.5512e-03 lowCoverage 1.0000000 2.8639e-02 lowCoverage 0.84619490 1.8839e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.03736685 4.8393e-01 insignificant 1.0000e+00 insignificant chr19 43910244 43911244 150683 ACTN4 ENSG00000130402 0.932786 561 13 0.773807 111 7 0.822336 118 7 0.8474146 617 13 0.953022 72 7 0.8709793 377 11 0.896429 84 7 0.8198932 94 7 0.800463 127 7 0.729762 87 7 0.947628 208 9 0.750000 52 6 0.6212121 130 7 0.750000 13 1 0.6642424 82 7 0.695960 67 6 0.473635 299 7 0.7298595 644 13 0.8124099 208 9 0.861684 257 9 0.850063 64 7 0.7988476 93 6 0.781204 261 11 0.829806 47 6 0.9437912 149 7 0.948675 168 9 0.846561 126 7 0.947090 46 6 0.816986 94 6 0.879505 171 9 0.710784 203 9 0.8766545 370 11 0.8082766 100 7 0.8468323 101 7 0.5964912 175 3 0.8323658 178 11 0.580186 75 7 0.7832612 230 11 0.8132176 468 13 0.886638 438 11 0.9318579 411 13 0.802653 618 13 0.9184706 580 11 0.9277482 0.923933 0.821285 0.922893 0.937536 0.9414197 0.921213 0.893887 0.938379 0.9089346 0.936940 0.8368930 0.972571 NA 0.951843 0.8767350 0.805695 0.8894358 0.8395979 0.941187 0.938728 0.7915550 0.920161 0.929010 0.964566 0.955454 0.955811 0.923786 0.9312872 0.963547 0.914912 0.9435621 0.8175321 0.8355055 0.7425498 0.9602881 0.783996 0.8452121 0.934316 0.902182 0.9463193 0.898398 0.9254686 4 0.880771 0.915737 -0.02464493 9 0.776668 0.706640 0.0700283 0.9507273 6.6048e-01 insignificant 1 1.000000 insignificant 0.9974640 1.7095e-01 insignificant 1 1.000000 insignificant -6.4821e-02 0.063702 insignificant 1 insignificant 0.882367 0.8859139 -0.0079326 9 0.869909 0.6407843 0.2291248 3.7375e-06 9.9756e-01 inconclusive 2.9429e-05 1.0000e+00 inconclusive 1.2089e-01 9.3265e-01 insignificant 5.8684e-01 1.0000e+00 insignificant 0.04644044 4.2926e-01 insignificant 1.0000e+00 insignificant 0.882001 0.883499 -0.00387437 11 0.736088 0.8137825 -0.07769422 5.0433e-01 5.3974e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5644e-01 2.0970e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.08289140 4.5578e-02 weaklyHypometh 7.4718e-01 insignificant 0.918299 0.8857809 0.0395869 9 0.831341 0.6196540 0.2116871 1.9772e-04 9.7407e-01 weaklyHypermeth 1.4539e-03 1.0000e+00 weaklyHypermeth 3.4733e-02 9.9448e-01 weaklyHypermeth 2.1050e-01 1.00000000 insignificant 0.1112617 7.6689e-02 insignificant 5.0737e-01 insignificant 0.918116 0.883453 0.02866950 9 0.775520 0.8013680 -0.02584813 1.0106e-01 8.6914e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6682e-01 9.8079e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0180702 6.0644e-01 insignificant 1.00000000 insignificant 0.8907168 0.883758 0.03027145 9 0.6949322 0.8477324 -0.15280019 3.7958e-01 4.2409e-08 inconclusive 1.0000000 9.6384e-07 inconclusive 0.60358984 8.7535e-02 insignificant 1.00000 5.5054e-01 insignificant -0.12933185 5.1430e-02 insignificant 4.2566e-01 insignificant chr19 44093614 44094614 150685 NFKBIB ENSG00000104825 0.717320 218 9 0.588043 217 9 0.607710 245 9 0.6563755 328 9 0.614747 131 7 0.5793471 311 9 0.627909 182 9 0.6736084 210 8 0.561849 224 9 0.743383 279 9 0.704173 239 10 0.565956 181 9 0.5621827 331 9 0.459938 135 5 0.7613680 294 9 0.489607 178 9 0.408189 119 9 0.5861915 400 9 0.5556719 173 9 0.563178 255 9 0.591170 113 8 0.4285636 296 9 0.711422 175 6 0.644990 101 7 0.8253781 240 9 0.750026 246 9 0.383498 202 9 0.565443 157 9 0.681526 179 9 0.757942 249 9 0.526827 272 9 0.5523202 305 9 0.3842682 177 8 0.3239470 203 9 0.3717949 88 3 0.2312999 172 8 0.455731 217 9 0.3348361 261 9 0.6900782 381 9 0.508447 321 9 0.5445316 298 9 0.592879 271 9 0.6063547 410 9 0.7227221 0.602712 0.657162 0.692503 0.596893 0.6581843 0.641778 0.720795 0.667509 0.7321544 0.745133 0.6244131 0.658782 0.599576 0.742698 0.5950257 0.540989 0.6708364 0.6720205 0.666061 0.715758 0.5612712 0.756077 0.705057 0.906816 0.858751 0.590635 0.705226 0.7421401 0.750659 0.598286 0.6695716 0.4807927 0.3588979 0.3448458 0.3508471 0.494642 0.3941352 0.730208 0.616285 0.6444649 0.656552 0.6010355 7 0.645806 0.690146 -0.03420167 9 0.700295 0.591252 0.1090428 0.8591508 3.1594e-01 insignificant 1 1.000000 insignificant 0.9664616 1.2961e-01 insignificant 1 1.000000 insignificant -1.6921e-02 0.705114 insignificant 1 insignificant 0.645654 0.4239714 0.2410439 9 0.645803 0.4160752 0.2297277 6.2748e-23 9.9245e-01 hypermethylated 1.9609e-21 1.0000e+00 hypermethylated 6.4060e-13 9.9987e-01 hypermethylated 4.0037e-11 1.0000e+00 hypermethylated 0.25102452 4.5686e-05 hypermethylated 1.5754e-03 hypermethylated 0.645654 0.539560 0.02196432 9 0.645803 0.6524114 -0.00660848 4.7628e-01 7.2053e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2354e-01 6.9383e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01287909 7.3642e-01 insignificant 1.0000e+00 insignificant 0.690571 0.4239714 0.2737471 9 0.653298 0.4160752 0.2372225 9.8414e-13 9.9140e-01 hypermethylated 1.8225e-11 1.0000e+00 hypermethylated 1.1757e-11 9.9955e-01 hypermethylated 7.3483e-10 1.00000000 hypermethylated 0.2679460 6.1187e-05 hypermethylated 2.3533e-03 hypermethylated 0.690571 0.539560 0.05726959 9 0.653298 0.6524114 0.00088640 3.0787e-01 8.1387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9330e-01 8.5354e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0298006 5.5824e-01 insignificant 1.00000000 insignificant 0.4239714 0.539560 -0.22731437 9 0.4160752 0.6524114 -0.23633614 9.9997e-01 6.4410e-12 hypomethylated 1.0000000 2.3855e-10 hypomethylated 0.99999632 6.7789e-07 hypomethylated 1.00000 4.2368e-05 hypomethylated -0.23814542 4.0304e-04 hypomethylated 1.7878e-02 hypomethylated chr19 45463610 45464610 150698 AKT2 ENSG00000105221 0.836504 236 6 0.874698 269 7 0.828686 133 7 0.8124478 178 4 0.896836 125 7 0.9217608 404 7 0.903628 162 7 0.8906519 209 7 0.881923 129 4 0.955419 83 6 0.919984 338 7 0.727381 47 5 0.9406158 225 7 0.891775 45 2 0.8457255 176 7 0.914286 41 6 0.833333 1161 4 0.8103042 248 4 0.9467192 389 6 0.949044 425 7 0.891327 135 7 0.8333333 19 2 0.896139 136 7 0.794414 143 7 1.0000000 29 4 0.875681 335 7 0.867997 163 7 0.881080 91 3 0.899319 298 6 0.929348 310 7 0.907991 300 7 0.9088641 347 7 0.5863538 309 7 0.5601153 253 7 0.5440476 419 5 0.6666667 6 0 0.593257 127 7 0.6165402 395 7 0.8159232 281 4 0.872896 323 7 0.9112535 264 4 0.683237 316 4 0.8122969 220 5 0.9106872 0.813469 0.873347 0.892360 0.959852 0.8972041 0.901027 0.860647 0.892177 0.9651994 0.904118 0.7291444 0.935094 0.861360 0.927354 0.9967914 0.990731 0.7900407 0.9324502 0.953486 0.911516 0.6747964 0.935103 0.880874 0.998605 0.841415 0.904780 0.949879 0.8896071 0.927708 0.897047 0.9332519 0.3890970 0.3999960 0.4313551 0.3930483 0.412395 0.4501532 0.868449 0.786156 0.8716726 0.815333 0.6632513 2 0.916783 0.903296 0.00843141 7 0.907863 0.899370 0.0084928 0.1940048 7.5353e-01 insignificant 1 1.000000 insignificant 0.7393372 4.4524e-01 insignificant 1 1.000000 insignificant -1.1372e-02 0.564330 insignificant 1 insignificant 0.916783 0.4261100 0.4956634 7 0.907863 0.5604135 0.3474495 2.0712e-29 1.0000e+00 hypermethylated 8.6302e-28 1.0000e+00 hypermethylated 4.4318e-08 9.9999e-01 hypermethylated 1.0809e-06 1.0000e+00 hypermethylated 0.28458945 5.5077e-08 hypermethylated 6.8846e-06 hypermethylated 0.916783 0.806980 0.12013845 6 0.907863 0.8515304 0.05633265 9.2899e-05 7.6138e-01 weaklyHypermeth 3.5730e-03 1.0000e+00 weaklyHypermeth 3.6217e-03 6.5728e-01 weaklyHypermeth 1.2489e-01 1.00000000 insignificant 0.05996478 2.0226e-01 lowCoverage 1.0000e+00 lowCoverage 0.903296 0.4261100 0.4553486 7 0.899370 0.5604135 0.3389567 5.2109e-25 1.0000e+00 hypermethylated 2.2656e-23 1.0000e+00 hypermethylated 1.6468e-07 9.9998e-01 hypermethylated 4.4508e-06 1.00000000 hypermethylated 0.2959610 3.3749e-08 hypermethylated 5.6248e-06 hypermethylated 0.903296 0.806980 0.09878445 6 0.899370 0.8515304 0.04783986 6.4392e-04 3.8845e-01 weaklyHypermeth 1.8398e-02 1.0000e+00 weaklyHypermeth 1.4877e-03 5.2323e-01 weaklyHypermeth 6.8258e-02 1.0000e+00 weaklyHypermeth 0.0713363 1.4272e-01 lowCoverage 1.00000000 lowCoverage 0.4261100 0.806980 -0.39699487 6 0.5604135 0.8515304 -0.29111686 9.9997e-01 3.1498e-07 hypomethylated 1.0000000 6.4283e-06 hypomethylated 0.99968129 2.2650e-03 weaklyHypometh 1.00000 2.7963e-02 weaklyHypometh -0.22462467 2.2266e-03 lowCoverage 5.3690e-02 lowCoverage chr19 45476636 45477636 150699 ENSG00000205041 0.914027 662 12 0.892841 542 12 0.791997 549 12 0.9291075 579 12 0.858924 357 12 0.9225364 807 12 0.891795 480 12 0.9248146 440 12 0.891909 351 12 0.876897 340 12 0.917813 527 12 0.824067 261 12 0.9141882 347 12 0.814550 142 9 0.9102064 391 12 0.927872 209 12 0.829715 119 6 0.8255967 936 12 0.9143945 535 12 0.852280 697 12 0.895381 255 12 0.9158750 236 10 0.898027 547 12 0.935715 210 13 0.8192148 415 11 0.850968 510 12 0.811833 361 12 0.825766 212 12 0.861254 600 12 0.928373 568 12 0.927112 526 12 0.9333261 746 12 0.0910958 564 12 0.0557772 595 12 0.0012821 588 13 0.0478674 452 9 0.087659 454 12 0.2611354 805 12 0.8618838 597 12 0.824120 474 12 0.8431483 473 12 0.856499 849 12 0.8175480 446 12 0.9171750 0.878051 0.786140 0.929831 0.827371 0.9218164 0.890733 0.915961 0.885696 0.9303222 0.905613 0.8544114 0.915387 0.892553 0.909619 0.9180447 0.866948 0.8188968 0.9144215 0.920632 0.955320 0.9029745 0.934702 0.919385 0.942613 0.907609 0.909748 0.924023 0.9300851 0.921546 0.920019 0.9330145 0.0796550 0.0558000 0.0018553 0.0703897 0.086327 0.2105027 0.906043 0.820821 0.8391908 0.849990 0.8354696 12 0.888038 0.922008 -0.03593662 12 0.777182 0.847608 -0.0704255 0.9996170 5.2582e-05 weaklyHypometh 1 0.052582 weaklyHypometh 0.9997558 3.3967e-05 weaklyHypometh 1 0.033967 weaklyHypometh -2.2938e-03 0.892870 insignificant 1 insignificant 0.888218 0.0989011 0.7858735 12 0.865952 0.0854401 0.7805120 4.9081e-163 1.0000e+00 hypermethylated 4.9081e-160 1.0000e+00 hypermethylated 1.6375e-30 1.0000e+00 hypermethylated 8.1875e-28 1.0000e+00 hypermethylated 0.79047376 1.2379e-06 hypermethylated 8.8420e-05 hypermethylated 0.888026 0.876278 0.02422542 12 0.764075 0.7813639 -0.01728854 2.9288e-03 3.3133e-01 weaklyHypermeth 6.6563e-02 1.0000e+00 weaklyHypermeth 8.9694e-03 3.1078e-01 weaklyHypermeth 2.4242e-01 1.00000000 insignificant 0.04063683 7.1801e-03 weaklyHypermeth 2.2888e-01 insignificant 0.922541 0.0989011 0.8234033 12 0.863796 0.0854401 0.7783559 4.2994e-137 1.0000e+00 hypermethylated 4.2994e-134 1.0000e+00 hypermethylated 2.5167e-27 1.0000e+00 hypermethylated 1.2584e-24 1.00000000 hypermethylated 0.7927675 4.4207e-07 hypermethylated 4.9119e-05 hypermethylated 0.921561 0.876365 0.06606058 12 0.825386 0.7935104 0.03187518 1.3287e-08 9.4997e-01 weaklyHypermeth 1.2079e-06 1.0000e+00 weaklyHypermeth 1.8632e-05 9.6437e-01 weaklyHypermeth 2.1544e-03 1.0000e+00 weaklyHypermeth 0.0429306 1.8272e-02 weaklyHypermeth 0.55368558 insignificant 0.0989011 0.876543 -0.76159651 12 0.0854401 0.8188791 -0.73343901 1.0000e+00 3.2662e-68 hypomethylated 1.0000000 3.2662e-65 hypomethylated 1.00000000 7.3753e-16 hypomethylated 1.00000 3.6877e-13 hypomethylated -0.74983693 2.1814e-06 hypomethylated 5.4534e-04 hypomethylated chr19 46249325 46250325 150710 CYP2A7P1 ENSG00000213908 0.917625 240 4 0.906535 217 4 0.748318 155 4 0.9427161 425 5 0.928125 164 4 0.9165303 444 4 0.903939 240 4 0.9342041 197 4 0.856979 367 4 0.909417 267 4 0.876670 155 4 0.872051 185 4 0.9482976 334 4 0.973069 128 4 0.9296068 263 4 0.924812 122 4 0.778740 183 4 0.7392307 591 4 0.9239766 108 4 0.961649 317 4 0.698252 55 4 0.8505473 112 4 0.903958 147 4 0.937500 115 4 0.9132074 75 4 0.951026 393 4 0.787729 52 4 0.873684 74 4 0.937908 173 4 0.961190 309 4 0.800814 449 4 0.9246026 480 4 0.7425977 204 4 0.6220388 116 4 0.6619048 193 5 0.5587912 30 3 0.762385 95 4 0.7891288 501 4 0.9537408 282 5 0.866899 288 5 0.8867518 297 5 0.903230 404 4 0.7891717 646 5 0.8997183 0.885970 0.755447 0.928722 0.922685 0.8930183 0.906174 0.933362 0.853014 0.9108578 0.877522 0.8746291 0.950903 0.969463 0.928374 0.9172405 0.772686 0.9243264 0.9289641 0.952999 0.877901 0.8467397 0.899547 0.929215 0.918253 0.923603 0.810525 0.881808 0.9402752 0.946384 0.950922 0.9070063 0.7399552 0.6195362 0.6755899 0.5956671 0.783960 0.8010135 0.936780 0.921281 0.9251020 0.906592 0.9330644 4 0.907291 0.922761 -0.01638967 4 0.880918 0.848456 0.0324626 0.9755685 2.3328e-01 lowCoverage 1 1.000000 lowCoverage 0.8777734 8.0149e-01 lowCoverage 1 1.000000 lowCoverage 1.6256e-02 0.561202 lowCoverage 1 lowCoverage 0.907291 0.7401229 0.1290935 4 0.880918 0.6768425 0.2040757 2.8866e-08 9.9995e-01 lowCoverage 2.9158e-07 1.0000e+00 lowCoverage 6.5754e-05 1.0000e+00 lowCoverage 7.5580e-04 1.0000e+00 lowCoverage 0.20515026 1.4504e-03 lowCoverage 2.1960e-02 lowCoverage 0.907291 0.921753 -0.01587355 4 0.880918 0.7607860 0.12013220 6.3887e-01 3.3969e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3581e-01 4.2456e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.01466615 6.4827e-01 lowCoverage 1.0000e+00 lowCoverage 0.922761 0.7401229 0.1456267 4 0.848456 0.6768425 0.1716131 2.2671e-07 9.9992e-01 lowCoverage 2.4913e-06 1.0000e+00 lowCoverage 1.9506e-04 9.9989e-01 lowCoverage 2.2948e-03 1.00000000 lowCoverage 0.1888938 1.7945e-03 lowCoverage 2.6390e-02 lowCoverage 0.922761 0.921753 0.00038575 4 0.848456 0.7607860 0.08766961 3.9495e-01 8.0485e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2184e-01 8.2403e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0015903 9.6510e-01 lowCoverage 1.00000000 lowCoverage 0.7401229 0.921753 -0.13700504 5 0.6768425 0.7607860 -0.08394349 9.9896e-01 1.6786e-03 weaklyHypometh 1.0000000 1.5123e-02 weaklyHypometh 0.99999566 3.1948e-03 weaklyHypometh 1.00000 3.7285e-02 weaklyHypometh -0.19048411 2.5516e-03 lowCoverage 5.5545e-02 lowCoverage chr19 46249616 46250616 150711 CYP2A7P1 ENSG00000213908 0.859528 254 6 0.906535 217 4 0.748318 155 4 0.9182666 438 7 0.928125 164 4 0.8832359 455 6 0.903939 240 4 0.9342041 197 4 0.856979 367 4 0.909417 267 4 0.876670 155 4 0.872051 185 4 0.9482976 334 4 0.973069 128 4 0.9296068 263 4 0.924812 122 4 0.805955 285 6 0.7661172 596 4 0.9159844 117 5 0.865463 325 4 0.698252 55 4 0.8505473 112 4 0.785972 156 5 0.937500 115 4 0.9132074 75 4 0.838269 400 4 0.787729 52 4 0.873684 74 4 0.937908 173 4 0.924659 320 6 0.746444 461 6 0.7675733 487 4 0.7425977 204 4 0.6220388 116 4 0.6839286 202 6 0.6848509 34 3 0.762385 95 4 0.8493777 509 4 0.8526720 291 6 0.847785 298 7 0.8782921 310 7 0.893820 414 5 0.8002121 670 7 0.8997183 0.885970 0.755447 0.928722 0.922685 0.8930183 0.906174 0.933362 0.853014 0.9108578 0.877522 0.8746291 0.950903 0.969463 0.928374 0.9172405 0.772686 0.9243264 0.9289641 0.952999 0.877901 0.8467397 0.899547 0.929215 0.918253 0.923603 0.810525 0.881808 0.9402752 0.946384 0.950922 0.9070063 0.7399552 0.6195362 0.6755899 0.5956671 0.783960 0.8010135 0.936780 0.921281 0.9251020 0.906592 0.9330644 4 0.905015 0.916532 -0.01150396 4 0.869022 0.783081 0.0859411 0.1517579 5.0895e-01 lowCoverage 1 1.000000 lowCoverage 0.2854044 9.5092e-01 lowCoverage 1 1.000000 lowCoverage 4.7850e-02 0.091329 lowCoverage 1 lowCoverage 0.905015 0.7431034 0.1252245 4 0.869022 0.7326318 0.1363901 5.3788e-07 8.0096e-01 lowCoverage 4.6369e-06 1.0000e+00 lowCoverage 5.8696e-04 9.7030e-01 lowCoverage 5.5374e-03 1.0000e+00 lowCoverage 0.16213234 2.5481e-03 lowCoverage 3.3975e-02 lowCoverage 0.905015 0.917801 -0.01445246 4 0.869022 0.7713470 0.09767491 6.9976e-01 1.1202e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6890e-01 4.4771e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.03177266 1.5366e-01 lowCoverage 1.0000e+00 lowCoverage 0.916532 0.7431034 0.1365574 4 0.783081 0.7326318 0.0504490 4.0339e-06 6.5732e-01 lowCoverage 3.7351e-05 1.0000e+00 lowCoverage 1.7725e-03 7.4663e-01 lowCoverage 1.5969e-02 1.00000000 lowCoverage 0.1142824 1.6078e-02 lowCoverage 1.3981e-01 lowCoverage 0.916532 0.917801 -0.00362955 4 0.783081 0.7713470 0.01173376 6.7926e-01 1.9591e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6413e-01 2.2638e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0160773 5.7950e-01 lowCoverage 1.00000000 lowCoverage 0.7431034 0.917801 -0.13262322 5 0.7326318 0.7713470 -0.03871520 9.8819e-01 1.0662e-02 weaklyHypometh 1.0000000 7.3530e-02 weaklyHypometh 0.99852623 1.8768e-02 weaklyHypometh 1.00000 1.6179e-01 insignificant -0.13035968 7.9842e-03 lowCoverage 1.0937e-01 lowCoverage chr19 46524794 46525794 150715 CCDC97 ENSG00000142039 0.335653 171 10 0.302237 233 11 0.240847 321 11 0.2849025 195 11 0.350816 213 8 0.2740505 319 11 0.436195 257 11 0.1887442 233 11 0.231688 273 9 0.179334 373 11 0.200265 278 11 0.192849 261 9 0.2851793 311 11 0.466367 137 7 0.2305707 327 11 0.356706 309 11 0.092504 186 7 0.1220411 221 10 0.3817526 216 10 0.230740 181 10 0.265152 105 8 0.1934209 285 10 0.178782 240 11 0.284256 98 8 0.4199542 608 10 0.336216 226 11 0.274298 249 11 0.329512 122 8 0.529457 211 9 0.262521 258 11 0.195784 226 11 0.1955128 217 11 0.2076091 151 11 0.3242846 252 11 0.4522727 140 6 0.0954545 247 10 0.310284 143 12 0.0557372 321 11 0.4352168 224 11 0.377301 165 11 0.3761591 124 10 0.413829 166 10 0.2775501 211 10 0.3376536 0.119895 0.243438 0.301907 0.210562 0.2419799 0.375753 0.244533 0.283621 0.1869366 0.242561 0.2544900 0.286956 0.401116 0.249637 0.2951768 0.111148 0.1170679 0.3547447 0.161378 0.269162 0.1510815 0.198942 0.275304 0.231075 0.293855 0.296776 0.254820 0.4412875 0.196055 0.182398 0.1478419 0.1660217 0.2986271 0.2357124 0.0388536 0.355008 0.0392934 0.471796 0.299061 0.4571375 0.357719 0.2348872 6 0.238076 0.247452 0.00690529 11 0.298703 0.354542 -0.0558390 0.2955373 6.3306e-01 insignificant 1 1.000000 insignificant 0.4681637 8.3175e-01 insignificant 1 1.000000 insignificant -1.9567e-02 0.604063 insignificant 1 insignificant 0.238057 0.1995211 0.0642102 11 0.358444 0.2073052 0.1511387 2.5376e-07 9.5348e-01 weaklyHypermeth 2.3497e-06 1.0000e+00 weaklyHypermeth 6.1548e-04 8.9071e-01 weaklyHypermeth 5.7522e-03 1.0000e+00 weaklyHypermeth 0.02823169 6.7927e-01 insignificant 1.0000e+00 insignificant 0.237800 0.367416 -0.11874053 11 0.298204 0.3762718 -0.07806729 8.5890e-01 3.9883e-07 weaklyHypometh 1.0000e+00 1.3294e-04 weaklyHypometh 9.7233e-01 1.1195e-03 weaklyHypometh 1.0000e+00 0.16903729 insignificant -0.10683910 1.1788e-02 weaklyHypometh 3.1297e-01 insignificant 0.246474 0.1996805 0.0609569 11 0.295126 0.2221127 0.0730131 2.1853e-03 9.8253e-01 weaklyHypermeth 1.3744e-02 1.0000e+00 weaklyHypermeth 5.2925e-02 9.8558e-01 insignificant 3.0592e-01 1.00000000 insignificant 0.0477983 5.0535e-01 insignificant 1.0000e+00 insignificant 0.246295 0.367416 -0.12495579 11 0.279366 0.3762718 -0.09690558 9.7297e-01 2.2359e-05 weaklyHypometh 1.0000e+00 1.1180e-02 weaklyHypometh 9.9879e-01 2.2639e-03 weaklyHypometh 1.0000e+00 2.3397e-01 insignificant -0.0872725 5.0343e-02 insignificant 1.00000000 insignificant 0.2000000 0.367416 -0.18176877 11 0.2391983 0.3762718 -0.13707351 9.9988e-01 5.7045e-07 weaklyHypometh 1.0000000 1.0970e-05 weaklyHypometh 0.99729329 3.3754e-04 weaklyHypometh 1.00000 6.3687e-03 weaklyHypometh -0.13507079 8.5011e-02 insignificant 6.1269e-01 insignificant chr19 47064879 47065879 150720 RPS19 ENSG00000105372 0.952710 318 5 0.895722 163 7 0.890263 127 6 0.9689901 433 5 0.923117 121 8 0.8114284 224 7 0.964079 142 4 0.9175988 187 5 0.821212 206 4 0.982480 224 6 0.935785 202 8 0.984681 108 5 0.9750389 242 5 0.893263 140 4 0.9530048 241 4 0.896320 74 5 0.934028 39 4 0.9205945 384 5 0.9690655 115 5 0.911210 172 5 0.832428 66 5 0.8625344 154 6 0.958551 207 6 0.984127 89 5 0.9447579 146 5 0.949199 211 8 0.755159 133 4 0.744505 112 6 0.963320 214 5 0.967484 270 7 0.985347 202 7 0.8640891 189 5 0.9804527 141 5 0.7354217 108 5 0.8876117 181 4 0.8708333 58 5 0.905070 110 6 0.8053571 84 3 0.7718170 323 5 0.924533 277 5 0.9335605 271 5 0.970996 270 5 0.9598289 342 5 0.9168916 0.916504 0.845681 0.945982 0.940920 0.8848214 0.916376 0.919662 0.909977 0.9702868 0.954791 0.9746148 0.948333 0.926615 0.955321 0.8764340 0.919581 0.9306455 0.9463455 0.922661 0.889665 0.9066198 0.951065 0.943452 0.927958 0.931254 0.899979 0.926609 0.9302367 0.931415 0.979110 0.8883466 0.9416808 0.7692082 0.9941502 0.9370040 0.849007 0.5896684 0.928510 0.936734 0.9628402 0.954953 0.9402898 4 0.934749 0.929754 0.00149799 5 0.776721 0.831390 -0.0546694 0.6895385 7.2073e-01 insignificant 1 1.000000 insignificant 0.9476554 7.0719e-01 insignificant 1 1.000000 insignificant 2.4071e-02 0.392195 insignificant 1 insignificant 0.934991 0.8885630 0.0429953 5 0.854393 0.8407270 0.0136658 4.5553e-01 8.9443e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9088e-01 6.5579e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06090512 1.4344e-01 lowCoverage 8.0583e-01 lowCoverage 0.935518 0.939312 -0.00761670 5 0.828505 0.8363371 -0.00783194 9.1297e-01 5.0727e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2931e-01 6.1700e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01288253 7.4698e-01 insignificant 1.0000e+00 insignificant 0.930151 0.8885630 0.0426591 5 0.847863 0.8407270 0.0071355 5.0859e-01 7.3296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2034e-01 5.4506e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0368339 4.0800e-01 lowCoverage 1.0000e+00 lowCoverage 0.930892 0.939312 -0.00937162 5 0.869081 0.8363371 0.03274434 8.5446e-01 5.5505e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6886e-01 7.1235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0111887 8.0541e-01 insignificant 1.00000000 insignificant 0.8868502 0.939312 -0.05318087 5 0.8101681 0.8363371 -0.02616901 9.9726e-01 7.4286e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.86572417 9.9075e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04802259 3.6216e-01 lowCoverage 1.0000e+00 lowCoverage chr19 47090374 47091374 150723 ARHGEF1 ENSG00000076928 0.924659 298 9 0.936914 220 9 0.847096 165 8 0.9005074 242 9 0.938367 107 8 0.6966860 236 7 0.839080 173 9 0.7987016 148 7 0.869105 127 8 0.900353 104 7 0.843342 279 9 0.920583 116 8 0.8662566 138 9 0.916667 12 1 0.7714519 130 8 0.950926 79 7 0.842452 78 8 0.8923545 288 9 0.8975537 199 9 0.830826 289 6 0.919372 55 6 0.6343434 76 5 0.853956 148 9 0.937500 52 6 0.8768849 54 5 0.971584 254 9 0.566296 107 6 0.895299 69 6 0.876593 226 9 0.910925 277 9 0.922004 282 9 0.8414443 357 8 0.7669367 165 8 0.7873016 211 9 1.0000000 203 6 0.9444444 39 5 0.782662 84 6 0.9459102 199 6 0.8989564 288 9 0.878175 460 9 0.9531752 235 9 0.903624 316 9 0.8760186 308 9 0.9505469 0.924305 0.910351 0.936137 0.928078 0.9330571 0.949834 0.874995 0.942518 0.9300220 0.856799 0.9025924 0.891771 NA 0.908390 0.9138655 0.803126 0.9137534 0.9304922 0.938883 0.914193 0.8666921 0.896973 0.924895 0.861317 0.956940 0.847185 0.889787 0.8980627 0.901035 0.931546 0.9269338 0.8447212 0.8168467 0.9731493 0.9285714 0.910356 0.9299636 0.907123 0.890854 0.9391696 0.911714 0.9077441 6 0.892065 0.903935 -0.00618314 9 0.887474 0.896828 -0.0093546 0.8937537 6.2676e-01 insignificant 1 1.000000 insignificant 0.5543026 9.1038e-01 insignificant 1 1.000000 insignificant 1.8677e-02 0.632566 insignificant 1 insignificant 0.892065 0.8501665 0.0523482 8 0.887474 0.8617853 0.0256883 1.7731e-02 7.2061e-02 weaklyHypermeth 9.1870e-02 1.0000e+00 weaklyHypermeth 7.3817e-01 9.3126e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00201505 9.6527e-01 insignificant 1.0000e+00 insignificant 0.892065 0.884256 -0.00127804 9 0.887474 0.8993742 -0.01190064 4.1374e-01 4.0442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6895e-01 4.6331e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03279562 1.2128e-01 insignificant 1.0000e+00 insignificant 0.903935 0.8501665 0.0500380 8 0.896828 0.8617853 0.0350428 1.1013e-01 2.3716e-01 insignificant 5.0060e-01 1.0000e+00 insignificant 9.2509e-01 1.0937e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0206924 7.1400e-01 insignificant 1.0000e+00 insignificant 0.903935 0.884256 0.00510468 9 0.896828 0.8993742 -0.00254608 5.1172e-01 7.4685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7886e-01 5.8857e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0514729 1.9925e-01 insignificant 1.00000000 insignificant 0.8501665 0.884256 -0.04572259 8 0.8617853 0.8993742 -0.03758891 5.8812e-02 4.4582e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.09607521 8.9103e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03078057 5.1367e-01 insignificant 1.0000e+00 insignificant chr19 47105479 47106479 150730 ARHGEF1 ENSG00000076928 0.799468 119 5 0.678383 293 7 0.769163 221 7 0.8541316 74 4 0.642223 194 7 0.8436883 378 7 0.780889 243 7 0.7055249 202 7 0.797849 170 7 0.839302 116 7 0.675210 290 7 0.638940 95 7 0.5228939 220 7 0.806606 86 4 0.7923332 224 7 0.762525 73 7 0.749053 37 4 0.4772740 182 5 0.7586156 317 7 0.659790 257 7 0.842427 140 7 0.6450818 39 4 0.839985 199 7 0.915418 172 7 0.6374777 60 4 0.736259 331 7 0.704004 227 7 0.789141 98 6 0.724491 244 7 0.681945 294 7 0.456991 358 7 0.8880474 347 7 0.1270474 233 7 0.2074513 176 7 0.3391115 212 5 0.6785714 25 3 0.149468 284 7 0.0390161 397 7 0.6872971 197 7 0.782384 202 7 0.8686097 103 4 0.578220 187 7 0.7634980 106 4 0.8086234 0.719779 0.751593 0.855925 0.676660 0.8309113 0.786516 0.715254 0.742979 0.8449417 0.734561 0.6498433 0.552875 0.774489 0.786406 0.7756654 0.791530 0.6148672 0.7541828 0.659123 0.861554 0.6041593 0.840164 0.882500 0.739669 0.764037 0.688875 0.807025 0.6851947 0.718494 0.553738 0.8953516 0.1172752 0.1320295 0.3335523 0.4866920 0.091629 0.0346554 0.709455 0.748900 0.7794677 0.560705 0.8198395 4 0.729887 0.741923 -0.01022527 7 0.571651 0.663357 -0.0917056 0.9592363 4.1873e-01 insignificant 1 1.000000 insignificant 0.9589708 4.8585e-01 insignificant 1 1.000000 insignificant -1.0746e-02 0.807355 insignificant 1 insignificant 0.730272 0.1371515 0.6031174 7 0.734980 0.1448019 0.5901781 3.7765e-53 1.0000e+00 hypermethylated 6.2942e-51 1.0000e+00 hypermethylated 4.3128e-10 1.0000e+00 hypermethylated 1.7970e-08 1.0000e+00 hypermethylated 0.47091554 3.3071e-03 weaklyHypermeth 4.0828e-02 weaklyHypermeth 0.730272 0.696855 0.03413072 7 0.734980 0.7179438 0.01703613 2.6266e-01 6.8130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2329e-01 6.3752e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00830867 8.8280e-01 insignificant 1.0000e+00 insignificant 0.742206 0.1371515 0.6146673 7 0.745744 0.1448019 0.6009424 1.3758e-35 1.0000e+00 hypermethylated 1.0583e-33 1.0000e+00 hypermethylated 9.0145e-09 1.0000e+00 hypermethylated 3.3387e-07 1.00000000 hypermethylated 0.4816614 2.3430e-03 weaklyHypermeth 3.2096e-02 weaklyHypermeth 0.742206 0.696855 0.04505008 7 0.745744 0.7179438 0.02780048 3.5423e-01 8.7778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8262e-01 8.9050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0024372 9.6915e-01 insignificant 1.00000000 insignificant 0.1371515 0.696855 -0.57648757 7 0.1448019 0.7179438 -0.57314195 1.0000e+00 1.6884e-22 hypomethylated 1.0000000 2.1104e-20 hypomethylated 0.99999996 5.2243e-06 hypomethylated 1.00000 1.9791e-04 hypomethylated -0.47922421 2.3148e-03 weaklyHypometh 5.3833e-02 weaklyHypometh chr19 47265006 47266006 150736 ZNF574 ENSG00000105732 0.084806 438 15 0.025849 637 15 0.079502 722 18 0.0084354 439 12 0.016714 539 16 0.1219296 790 16 0.067799 829 18 0.0290287 635 18 0.061962 818 18 0.090562 966 18 0.064650 669 18 0.049913 778 18 0.0191452 664 16 0.037846 284 6 0.0086013 918 17 0.016422 716 17 0.083652 8887 15 0.1031194 517 11 0.0532989 665 18 0.143523 674 14 0.106511 344 18 0.1680193 324 12 0.133906 556 16 0.052772 360 17 0.1962062 467 14 0.019632 691 17 0.061166 743 20 0.039116 402 17 0.120162 570 13 0.062659 748 16 0.081761 718 18 0.0692788 719 15 0.0461290 519 14 0.0329550 383 17 0.1045285 394 12 0.0244075 286 15 0.131130 272 15 0.1080957 502 16 0.1177885 582 15 0.084365 520 15 0.0191311 380 12 0.163329 438 14 0.1132392 552 15 0.0772515 0.035779 0.109684 0.032932 0.045553 0.0814425 0.043059 0.026316 0.038195 0.0213975 0.074279 0.0535375 0.028662 0.071906 0.012270 0.0298616 0.189493 0.0470241 0.0158187 0.033627 0.095538 0.0718016 0.041886 0.045932 0.046924 0.012240 0.044282 0.023199 0.0484981 0.022815 0.018601 0.0618224 0.0664382 0.0157848 0.0608553 0.0307120 0.099880 0.0532682 0.024186 0.064467 0.0279999 0.045635 0.0701768 11 0.052127 0.042307 0.01511577 18 0.076535 0.110343 -0.0338073 0.7387666 7.5410e-01 insignificant 1 1.000000 insignificant 0.8784913 4.1966e-01 insignificant 1 1.000000 insignificant -3.4261e-02 0.068779 insignificant 1 insignificant 0.052097 0.0475382 0.0070827 17 0.070527 0.0915472 -0.0210207 8.1697e-01 5.2483e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4853e-01 9.7256e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01620305 4.5292e-01 insignificant 1.0000e+00 insignificant 0.051972 0.036408 0.01541981 15 0.069476 0.1254310 -0.05595537 9.6379e-01 8.8314e-04 inconclusive 1.0000e+00 9.8127e-02 inconclusive 8.0540e-01 1.1329e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04123263 1.6260e-01 insignificant 1.0000e+00 insignificant 0.041962 0.0472542 -0.0047991 17 0.093963 0.0802292 0.0137338 9.2477e-01 6.2098e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9518e-01 9.7456e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0180581 4.6825e-01 insignificant 1.0000e+00 insignificant 0.041787 0.036408 -0.01036705 15 0.112216 0.1254310 -0.01321521 9.2062e-01 5.2730e-03 weaklyHypometh 1.0000e+00 3.8725e-01 insignificant 6.6814e-01 1.1955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0069714 8.1209e-01 insignificant 1.00000000 insignificant 0.0470890 0.036018 -0.00111242 14 0.0566553 0.0856778 -0.02902255 9.4802e-01 2.0566e-01 insignificant 1.0000000 9.6628e-01 insignificant 0.95452644 4.2036e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02502957 4.3005e-01 insignificant 1.0000e+00 insignificant chr19 47265544 47266544 150737 ZNF574 ENSG00000105732 0.086566 293 13 0.035806 422 13 0.070785 617 13 0.0074830 173 8 0.013397 398 11 0.0840263 517 13 0.029907 672 13 0.0463063 501 13 0.066380 713 13 0.119317 726 13 0.078548 484 13 0.045708 677 13 0.0302157 595 13 0.058780 143 3 0.0184158 682 15 0.024984 567 13 0.120583 734 13 0.0450348 244 11 0.0166954 398 14 0.096106 497 13 0.140001 236 15 0.1917719 167 8 0.120018 441 12 0.065708 255 14 0.1990097 122 7 0.019658 592 12 0.070073 366 15 0.063972 297 14 0.102915 342 11 0.078017 629 13 0.097498 553 13 0.0838238 590 12 0.0505201 429 10 0.0109113 320 13 0.1552198 414 10 0.0091512 164 11 0.167329 211 14 0.0522158 412 12 0.0175882 345 12 0.059203 322 12 0.0189809 177 10 0.131888 215 11 0.1077222 245 12 0.1054579 0.047254 0.093495 0.017216 0.027663 0.0617885 0.054373 0.034092 0.032614 0.0292940 0.091183 0.0664478 0.032370 0.076224 0.022749 0.0490057 0.300418 0.0329892 0.0187810 0.040793 0.150044 0.0707370 0.046828 0.048829 0.050419 0.018355 0.069255 0.042725 0.0555116 0.021602 0.022150 0.0718718 0.0421474 0.0116988 0.0804715 0.0291724 0.128971 0.0342516 0.017184 0.042916 0.0199018 0.035629 0.0731256 10 0.069929 0.052505 0.01536961 13 0.072543 0.088921 -0.0163780 0.6692430 1.1949e-01 insignificant 1 1.000000 insignificant 0.6337225 3.9810e-02 inconclusive 1 1.000000 insignificant -4.7953e-02 0.012296 weaklyHypometh 1 insignificant 0.069929 0.0415385 0.0172306 13 0.072543 0.1085304 -0.0359872 2.0862e-01 5.5544e-01 insignificant 9.0312e-01 1.0000e+00 insignificant 7.4294e-02 9.6157e-01 insignificant 3.8099e-01 1.0000e+00 insignificant -0.01947235 5.3616e-01 insignificant 1.0000e+00 insignificant 0.069879 0.038344 0.04126455 12 0.068149 0.0645485 0.00360005 4.8147e-01 1.0439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1996e-01 7.8483e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01232425 6.3463e-01 insignificant 1.0000e+00 insignificant 0.052505 0.0415385 0.0069008 13 0.088921 0.1085304 -0.0196092 3.4900e-01 9.3846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5911e-01 9.9237e-01 insignificant 7.7237e-01 1.00000000 insignificant 0.0284809 4.0519e-01 insignificant 1.0000e+00 insignificant 0.051988 0.038344 0.00564507 12 0.078854 0.0645485 0.01430529 3.2954e-01 5.8299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5649e-02 9.5202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0356290 2.3542e-01 insignificant 1.00000000 insignificant 0.0410467 0.038344 -0.00164639 12 0.0528136 0.0645485 -0.01173496 9.0312e-01 6.3944e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.90343961 8.2555e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00714809 8.5017e-01 insignificant 1.0000e+00 insignificant chr19 47265836 47266836 150738 ZNF574 ENSG00000105732 0.068369 178 6 0.028437 218 6 0.071686 369 6 0.0051020 125 4 0.011574 241 6 0.0228768 301 6 0.046116 352 6 0.0397429 266 6 0.032769 382 6 0.152767 444 6 0.060794 279 6 0.059341 394 6 0.0364905 367 6 0.151786 112 1 0.0198413 410 6 0.032063 324 6 0.207141 489 6 0.0378951 182 6 0.0139494 224 6 0.018599 296 6 0.091118 128 7 0.0027322 88 3 0.182744 260 6 0.035502 130 6 0.0072464 63 2 0.018684 352 6 0.031870 220 6 0.022301 174 6 0.022076 200 6 0.017235 352 6 0.024924 287 6 0.0434973 353 6 0.0337677 254 6 0.0272783 178 6 0.0000000 299 6 0.0198276 95 6 0.250510 87 6 0.0294149 215 6 0.0125000 225 6 0.038690 243 6 0.0019608 138 6 0.045833 147 6 0.0759549 181 6 0.0987589 0.055647 0.088895 0.015343 0.025458 0.0419299 0.066186 0.033404 0.031525 0.0211869 0.093382 0.0627105 0.034553 NA 0.027049 0.0576305 0.439738 0.0430976 0.0184212 0.021593 0.148279 0.0082163 0.037225 0.041191 0.021791 0.017362 0.055655 0.032193 0.0234215 0.023128 0.019717 0.0542898 0.0308452 0.0175622 0.0000000 0.0412476 0.122315 0.0208512 0.010024 0.041563 0.0058964 0.038484 0.0559740 6 0.086679 0.036440 0.04266914 6 0.064988 0.063134 0.0018536 0.2392662 8.5503e-01 insignificant 1 1.000000 insignificant 0.1180571 9.6189e-01 insignificant 1 1.000000 insignificant 1.4206e-02 0.455876 insignificant 1 insignificant 0.086679 0.0265957 0.0409383 6 0.064988 0.1641163 -0.0991288 1.3533e-01 6.0028e-01 insignificant 6.0147e-01 1.0000e+00 insignificant 3.6508e-02 7.2871e-01 weaklyHypermeth 2.1103e-01 1.0000e+00 insignificant -0.00426619 9.1898e-01 insignificant 1.0000e+00 insignificant 0.086613 0.029979 0.06302847 6 0.052009 0.0356349 0.01637444 2.4751e-01 2.8333e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0902e-02 8.1807e-01 weaklyHypermeth 8.0199e-01 1.00000000 insignificant 0.02087902 2.6233e-01 insignificant 1.0000e+00 insignificant 0.036440 0.0265957 0.0073575 6 0.063134 0.1641163 -0.1009824 4.2257e-01 6.2997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6348e-01 5.6904e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0184723 6.6704e-01 insignificant 1.0000e+00 insignificant 0.035453 0.029979 0.00647382 6 0.031990 0.0356349 -0.00364529 3.0083e-01 3.7567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5538e-01 7.6358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0066729 7.3685e-01 insignificant 1.00000000 insignificant 0.0257320 0.029979 -0.00528999 6 0.0248024 0.0356349 -0.01083248 6.8582e-01 4.3760e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.59329236 7.6533e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02514522 5.5749e-01 insignificant 1.0000e+00 insignificant chr19 47287399 47288399 150745 POU2F2 ENSG00000028277 0.857829 139 6 0.694777 86 4 0.600714 86 5 0.8046891 206 9 0.863063 56 4 0.7257696 232 9 0.593750 91 4 0.6898139 105 6 0.746187 112 4 0.835929 104 6 0.839102 136 7 0.798778 69 5 0.8191654 135 6 0.869048 52 4 0.9617409 133 4 0.809524 26 4 0.748148 29 2 0.7953217 203 8 0.6826599 85 6 0.666535 165 8 0.831250 54 5 0.7318665 118 8 0.872538 121 5 0.555221 69 4 0.9129630 130 7 0.822141 67 5 0.591436 112 7 0.602092 96 5 0.634804 63 4 0.813714 73 6 0.649969 93 6 0.7875714 152 9 0.7048189 88 6 0.7861130 61 4 0.5599678 95 5 0.6503175 64 6 0.571794 122 7 0.3605754 130 7 0.7016876 122 5 0.654724 113 5 0.7655844 120 6 0.814493 108 5 0.8023293 144 8 0.7995063 0.847458 0.844306 0.905051 0.855661 0.8662050 0.816622 0.848391 0.910707 0.8774947 0.865186 0.9030261 0.874266 0.869565 0.948726 0.8510531 0.805108 0.9197526 0.8785369 0.906602 0.956522 0.9431955 0.965424 0.892244 0.930987 0.870100 0.784426 0.947434 0.7187919 0.820451 0.878800 0.9228660 0.8224627 0.8996355 0.8699519 0.9475993 0.934919 0.5503056 0.862783 0.829532 0.9111801 0.834101 0.8777389 2 0.851357 0.833624 -0.00520385 6 0.770587 0.756698 0.0138890 0.7598319 8.5533e-01 insignificant 1 1.000000 insignificant 0.8103161 8.4478e-01 insignificant 1 1.000000 insignificant 3.6330e-02 0.388805 insignificant 1 insignificant 0.851357 0.6391382 0.1738793 6 0.749731 0.4667124 0.2830187 2.2675e-10 7.2296e-01 weaklyHypermeth 2.5768e-09 1.0000e+00 weaklyHypermeth 2.8612e-02 4.9489e-01 weaklyHypermeth 1.7031e-01 1.0000e+00 insignificant 0.16452944 3.9480e-02 weaklyHypermeth 2.9418e-01 insignificant 0.851225 0.846787 0.00574261 6 0.724704 0.7254354 -0.00073121 3.5910e-01 3.5454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5227e-01 4.9751e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02236349 5.6281e-01 insignificant 1.0000e+00 insignificant 0.832750 0.6402878 0.1793672 6 0.708037 0.5133836 0.1946538 1.4672e-08 9.8851e-01 weaklyHypermeth 1.7467e-07 1.0000e+00 weaklyHypermeth 7.2924e-02 8.5540e-01 insignificant 4.0513e-01 1.00000000 insignificant 0.1281993 9.9854e-02 insignificant 6.1260e-01 insignificant 0.832750 0.846787 0.01278240 6 0.708037 0.7254354 -0.01739800 3.0195e-01 4.6090e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2545e-01 5.9815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139666 7.6900e-01 insignificant 1.00000000 insignificant 0.6402878 0.846787 -0.18362917 6 0.5133836 0.7254354 -0.21205181 9.5197e-01 1.8329e-04 weaklyHypometh 1.0000000 1.9923e-03 weaklyHypometh 0.70061661 2.1239e-01 insignificant 1.00000 1.0000e+00 insignificant -0.14216595 7.0555e-02 insignificant 5.4273e-01 insignificant chr19 47347987 47348987 150750 POU2F2 ENSG00000028277 0.773757 253 6 0.780570 191 8 0.749587 284 9 0.8125485 111 7 0.876060 136 8 0.9041605 233 8 0.868816 203 9 0.8765940 168 8 0.754137 189 8 0.903475 204 9 0.892630 330 9 0.809078 150 8 0.7352850 193 8 0.884921 29 1 0.7550493 251 8 0.681568 109 6 0.661436 100 6 0.6955502 162 7 0.8713880 140 7 0.768995 328 9 0.896717 138 8 0.5380952 50 4 0.841478 219 8 0.911524 110 7 0.8137566 57 6 0.816479 225 8 0.831183 186 8 0.784863 124 8 0.790963 91 7 0.828520 234 8 0.838495 214 8 0.8659210 349 9 0.1142876 232 9 0.2362654 181 7 0.4433862 88 3 0.2805093 130 6 0.334812 122 9 0.5817868 237 8 0.5992114 231 7 0.557623 342 7 0.5787564 194 6 0.614189 233 6 0.5495562 178 7 0.7482773 0.752040 0.790365 0.781702 0.853353 0.8750520 0.843350 0.853868 0.804943 0.8597160 0.874945 0.8265925 0.745725 0.862058 0.739531 0.7088729 0.727544 0.6855384 0.8535237 0.759326 0.914536 0.4518157 0.836725 0.900243 0.747773 0.792539 0.835933 0.804850 0.8306246 0.775705 0.797503 0.8816539 0.1392873 0.2468325 0.5519832 0.2920809 0.361491 0.4211668 0.508269 0.522288 0.5446682 0.588308 0.4941463 6 0.809511 0.837757 -0.03386106 7 0.802466 0.838191 -0.0357249 0.9837332 2.3960e-02 weaklyHypometh 1 0.740462 insignificant 0.7757348 1.3262e-01 insignificant 1 1.000000 insignificant -1.0386e-02 0.751987 insignificant 1 insignificant 0.809511 0.3424242 0.4664745 7 0.802466 0.3374323 0.4650338 3.3616e-40 1.0000e+00 hypermethylated 2.2411e-38 1.0000e+00 hypermethylated 1.8562e-15 1.0000e+00 hypermethylated 2.3203e-13 1.0000e+00 hypermethylated 0.47093920 6.0711e-04 hypermethylated 1.2551e-02 hypermethylated 0.809511 0.546689 0.26850602 7 0.802466 0.5747952 0.22767091 1.2547e-27 9.9961e-01 hypermethylated 6.2734e-25 1.0000e+00 hypermethylated 4.0088e-12 9.9708e-01 hypermethylated 2.0044e-09 1.00000000 hypermethylated 0.22291318 1.6497e-09 hypermethylated 8.2483e-07 hypermethylated 0.837757 0.3424242 0.5013369 7 0.838191 0.3374323 0.5007588 1.2569e-28 1.0000e+00 hypermethylated 6.9828e-27 1.0000e+00 hypermethylated 1.6871e-12 1.0000e+00 hypermethylated 1.4059e-10 1.00000000 hypermethylated 0.4813251 3.4082e-04 hypermethylated 7.7458e-03 hypermethylated 0.837757 0.546689 0.29223108 7 0.838191 0.5747952 0.26339586 1.4687e-21 9.9969e-01 hypermethylated 7.3435e-19 1.0000e+00 hypermethylated 4.6958e-08 9.9568e-01 hypermethylated 1.5653e-05 1.0000e+00 hypermethylated 0.2332991 1.6230e-06 hypermethylated 0.00081151 hypermethylated 0.3424242 0.546689 -0.22261618 7 0.3374323 0.5747952 -0.23736290 9.9954e-01 2.7095e-05 hypomethylated 1.0000000 3.4737e-04 hypomethylated 0.99999928 1.9870e-04 hypomethylated 1.00000 4.1396e-03 hypomethylated -0.24802601 1.3171e-02 weaklyHypometh 1.4316e-01 insignificant chr19 47348194 47349194 150751 POU2F2 ENSG00000028277 0.773757 253 6 0.780570 191 8 0.749587 284 9 0.8125485 111 7 0.876060 136 8 0.9041605 233 8 0.868816 203 9 0.8765940 168 8 0.754137 189 8 0.903475 204 9 0.892630 330 9 0.809078 150 8 0.7352850 193 8 0.884921 29 1 0.7550493 251 8 0.681568 109 6 0.661436 100 6 0.6955502 162 7 0.8713880 140 7 0.768995 328 9 0.896717 138 8 0.5380952 50 4 0.841478 219 8 0.911524 110 7 0.8137566 57 6 0.816479 225 8 0.831183 186 8 0.784863 124 8 0.790963 91 7 0.828520 234 8 0.838495 214 8 0.8659210 349 9 0.1142876 232 9 0.2362654 181 7 0.4433862 88 3 0.2805093 130 6 0.334812 122 9 0.5817868 237 8 0.5992114 231 7 0.557623 342 7 0.5787564 194 6 0.614189 233 6 0.5495562 178 7 0.7482773 0.752040 0.790365 0.781702 0.853353 0.8750520 0.843350 0.853868 0.804943 0.8597160 0.874945 0.8265925 0.745725 0.862058 0.739531 0.7088729 0.727544 0.6855384 0.8535237 0.759326 0.914536 0.4518157 0.836725 0.900243 0.747773 0.792539 0.835933 0.804850 0.8306246 0.775705 0.797503 0.8816539 0.1392873 0.2468325 0.5519832 0.2920809 0.361491 0.4211668 0.508269 0.522288 0.5446682 0.588308 0.4941463 6 0.809511 0.837757 -0.03386106 7 0.802466 0.838191 -0.0357249 0.9837332 2.3960e-02 weaklyHypometh 1 0.740462 insignificant 0.7757348 1.3262e-01 insignificant 1 1.000000 insignificant -1.0386e-02 0.751987 insignificant 1 insignificant 0.809511 0.3424242 0.4664745 7 0.802466 0.3374323 0.4650338 3.3616e-40 1.0000e+00 hypermethylated 2.2411e-38 1.0000e+00 hypermethylated 1.8562e-15 1.0000e+00 hypermethylated 2.3203e-13 1.0000e+00 hypermethylated 0.47093920 6.0711e-04 hypermethylated 1.2551e-02 hypermethylated 0.809511 0.546689 0.26850602 7 0.802466 0.5747952 0.22767091 1.2547e-27 9.9961e-01 hypermethylated 6.2734e-25 1.0000e+00 hypermethylated 4.0088e-12 9.9708e-01 hypermethylated 2.0044e-09 1.00000000 hypermethylated 0.22291318 1.6497e-09 hypermethylated 8.2483e-07 hypermethylated 0.837757 0.3424242 0.5013369 7 0.838191 0.3374323 0.5007588 1.2569e-28 1.0000e+00 hypermethylated 6.9828e-27 1.0000e+00 hypermethylated 1.6871e-12 1.0000e+00 hypermethylated 1.4059e-10 1.00000000 hypermethylated 0.4813251 3.4082e-04 hypermethylated 7.7458e-03 hypermethylated 0.837757 0.546689 0.29223108 7 0.838191 0.5747952 0.26339586 1.4687e-21 9.9969e-01 hypermethylated 7.3435e-19 1.0000e+00 hypermethylated 4.6958e-08 9.9568e-01 hypermethylated 1.5653e-05 1.0000e+00 hypermethylated 0.2332991 1.6230e-06 hypermethylated 0.00081151 hypermethylated 0.3424242 0.546689 -0.22261618 7 0.3374323 0.5747952 -0.23736290 9.9954e-01 2.7095e-05 hypomethylated 1.0000000 3.4737e-04 hypomethylated 0.99999928 1.9870e-04 hypomethylated 1.00000 4.1396e-03 hypomethylated -0.24802601 1.3171e-02 weaklyHypometh 1.4316e-01 insignificant chr19 47446305 47447305 150758 ENSG00000204957 0.882654 367 14 0.801461 458 15 0.785868 433 14 0.8992013 258 9 0.862845 249 13 0.9181798 610 15 0.837285 488 15 0.8154671 333 17 0.761333 374 14 0.871132 287 14 0.814159 510 15 0.880822 231 14 0.8381180 323 13 0.739618 157 8 0.8710125 412 14 0.866230 233 14 0.782132 120 10 0.8035654 407 15 0.8243399 483 14 0.926616 543 14 0.809724 347 15 0.7861178 195 9 0.830523 403 17 0.820865 316 15 0.7897335 296 11 0.842180 427 15 0.814531 442 15 0.774472 212 15 0.810463 393 15 0.897725 489 15 0.897037 498 17 0.8432044 588 14 0.1125874 471 17 0.1047276 485 15 0.2319262 216 8 0.3448556 202 11 0.251942 452 13 0.2542727 635 17 0.8485372 447 13 0.866055 429 15 0.7649497 189 9 0.767767 332 14 0.7157047 290 14 0.8581854 0.776396 0.793990 0.857372 0.837600 0.9055058 0.875427 0.850680 0.847288 0.8469112 0.889115 0.8401195 0.893373 0.832535 0.851779 0.8881194 0.644312 0.7568750 0.8738158 0.913977 0.883224 0.7646396 0.860729 0.823047 0.829272 0.906373 0.807522 0.813511 0.8015990 0.907816 0.900826 0.8506095 0.0849189 0.0974528 0.1349235 0.2421813 0.111712 0.1948176 0.797335 0.820758 0.8286766 0.762114 0.6531505 9 0.870258 0.877502 -0.00842223 14 0.808459 0.831134 -0.0226754 0.8201130 1.4032e-01 insignificant 1 1.000000 insignificant 0.6655312 3.7897e-01 insignificant 1 1.000000 insignificant 1.2721e-02 0.438446 insignificant 1 insignificant 0.870258 0.1865854 0.7059564 14 0.808459 0.2303048 0.5781540 3.3370e-159 1.0000e+00 hypermethylated 1.6685e-156 1.0000e+00 hypermethylated 7.6786e-34 1.0000e+00 hypermethylated 7.6786e-31 1.0000e+00 hypermethylated 0.62238336 4.3194e-06 hypermethylated 2.5408e-04 hypermethylated 0.870258 0.773563 0.07776044 13 0.808459 0.7312955 0.07716332 4.3508e-10 9.9350e-01 weaklyHypermeth 3.9553e-08 1.0000e+00 weaklyHypermeth 9.7965e-05 9.9105e-01 weaklyHypermeth 6.9975e-03 1.00000000 weaklyHypermeth 0.04649916 1.8211e-01 insignificant 1.0000e+00 insignificant 0.877147 0.1869159 0.7064678 15 0.804934 0.2708151 0.5341190 6.8722e-111 9.9996e-01 hypermethylated 3.4361e-108 1.0000e+00 hypermethylated 2.4551e-30 1.0000e+00 hypermethylated 2.4551e-27 1.00000000 hypermethylated 0.6096629 5.1392e-06 hypermethylated 4.2826e-04 hypermethylated 0.877502 0.773563 0.08743171 13 0.831134 0.7312955 0.09983867 3.7177e-08 9.9945e-01 weaklyHypermeth 3.0981e-06 1.0000e+00 weaklyHypermeth 4.6231e-04 9.9373e-01 weaklyHypermeth 3.3022e-02 1.0000e+00 weaklyHypermeth 0.0337787 3.1281e-01 insignificant 1.00000000 insignificant 0.1865854 0.773563 -0.62342690 13 0.2303048 0.7312955 -0.50099066 1.0000e+00 4.3170e-49 hypomethylated 1.0000000 2.1585e-46 hypomethylated 1.00000000 2.6197e-17 hypomethylated 1.00000 2.6197e-14 hypomethylated -0.57588420 8.5584e-07 hypomethylated 2.8528e-04 hypomethylated chr19 47464968 47465968 150763 ERF ENSG00000105722 0.078014 910 22 0.082025 678 21 0.070281 653 21 0.1141714 1003 21 0.108643 508 21 0.1277742 1316 22 0.074513 690 21 0.1024878 598 21 0.085705 768 21 0.081533 799 18 0.123168 732 22 0.078888 614 22 0.1153793 717 18 0.016964 419 11 0.1024054 909 18 0.090104 605 21 0.073736 1181 17 0.0873042 1155 21 0.1149552 722 22 0.126608 1014 22 0.102160 271 21 0.0793927 600 19 0.105261 598 21 0.089187 389 21 0.0127837 793 16 0.108136 734 22 0.122654 698 22 0.101762 374 23 0.084947 603 21 0.065270 921 21 0.080340 742 23 0.1161783 1218 24 0.0125225 569 23 0.0014025 473 21 0.0498573 723 20 0.0593519 592 19 0.054869 509 22 0.0609423 651 22 0.0680706 1274 21 0.052171 939 21 0.1270394 780 21 0.053859 1145 18 0.0625816 980 20 0.0535767 0.038751 0.051915 0.046945 0.048931 0.0767469 0.036689 0.033931 0.027995 0.0430441 0.065162 0.0207658 0.026307 0.045072 0.039778 0.0642841 0.064508 0.0503454 0.0430499 0.069649 0.097113 0.0448270 0.066557 0.032012 0.045326 0.062094 0.044200 0.035034 0.0459904 0.035516 0.037436 0.0623306 0.0066606 0.0034484 0.0096693 0.0120366 0.034145 0.0213095 0.033890 0.043687 0.0325251 0.049530 0.0445044 17 0.089220 0.060194 0.00680389 21 0.094566 0.085323 0.0092428 0.8534774 9.6936e-01 insignificant 1 1.000000 insignificant 0.9623318 9.8906e-01 insignificant 1 1.000000 insignificant 3.7270e-03 0.719756 insignificant 1 insignificant 0.089139 0.0312856 0.0842486 22 0.086245 0.0654487 0.0207962 8.2711e-09 9.9070e-01 weaklyHypermeth 8.6157e-08 1.0000e+00 weaklyHypermeth 5.5294e-03 9.9989e-01 weaklyHypermeth 4.0068e-02 1.0000e+00 weaklyHypermeth 0.05290873 2.1928e-03 weaklyHypermeth 3.0038e-02 weaklyHypermeth 0.089195 0.068972 0.01784347 21 0.099513 0.0859277 0.01358568 3.9187e-01 9.6069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1532e-01 9.9291e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01998866 2.3666e-01 insignificant 1.0000e+00 insignificant 0.060262 0.0312945 0.0559138 21 0.097092 0.0677056 0.0293865 2.3166e-05 9.9692e-01 weaklyHypermeth 1.9467e-04 1.0000e+00 weaklyHypermeth 3.6470e-02 1.0000e+00 weaklyHypermeth 2.1970e-01 1.00000000 insignificant 0.0491818 3.8137e-03 weaklyHypermeth 4.7671e-02 weaklyHypermeth 0.060220 0.068986 0.00955995 20 0.092627 0.0893648 0.00326195 6.1930e-01 8.5979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0583e-01 9.5502e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0162617 3.4942e-01 insignificant 1.00000000 insignificant 0.0291013 0.068972 -0.07148644 21 0.0370562 0.0859277 -0.04887149 9.9925e-01 2.3950e-02 weaklyHypometh 1.0000000 1.4604e-01 insignificant 0.99999711 4.0781e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03292008 9.6781e-02 insignificant 6.4954e-01 insignificant chr19 47465159 47466159 150764 ERF ENSG00000105722 0.146850 761 15 0.115612 445 14 0.112682 444 14 0.1611831 870 14 0.156175 340 14 0.1607972 900 15 0.111769 532 14 0.1039513 421 14 0.126036 598 14 0.117151 563 14 0.159305 472 15 0.118332 458 15 0.1161777 542 14 0.046652 267 4 0.1449953 673 14 0.116114 455 14 0.115212 1157 14 0.1217051 995 14 0.1622896 555 15 0.176184 787 15 0.157353 199 14 0.1173469 444 12 0.151539 476 14 0.133780 263 14 0.0196672 676 12 0.144181 444 15 0.190603 441 15 0.168434 260 15 0.122112 446 14 0.091014 581 14 0.122873 512 16 0.1640164 892 17 0.0168899 395 16 0.0020161 393 14 0.0716699 491 14 0.0853184 548 15 0.092548 271 15 0.0830082 453 15 0.0978515 1101 14 0.071453 795 14 0.1826192 703 14 0.084636 1046 14 0.0846788 871 13 0.0708803 0.046660 0.066969 0.062107 0.064734 0.0976332 0.048538 0.044889 0.037037 0.0545589 0.084079 0.0274725 0.033003 0.059629 0.050121 0.0708807 0.085342 0.0647050 0.0569537 0.089090 0.122626 0.0575922 0.081718 0.042351 0.059964 0.082149 0.057329 0.042601 0.0608439 0.046678 0.049526 0.0824615 0.0066234 0.0045621 0.0127922 0.0159241 0.041272 0.0263923 0.044835 0.051110 0.0430297 0.065527 0.0499762 13 0.114517 0.083614 0.00803069 14 0.126119 0.155257 -0.0291381 0.5763095 5.3292e-01 insignificant 1 1.000000 insignificant 0.7267964 6.8755e-01 insignificant 1 1.000000 insignificant -2.4512e-03 0.866971 insignificant 1 insignificant 0.114517 0.0415686 0.1152516 15 0.126119 0.1075951 0.0185237 2.9367e-13 7.6933e-01 weaklyHypermeth 4.1953e-12 1.0000e+00 weaklyHypermeth 2.3097e-05 9.7297e-01 weaklyHypermeth 3.2407e-04 1.0000e+00 weaklyHypermeth 0.07088356 4.7150e-03 weaklyHypermeth 5.4195e-02 weaklyHypermeth 0.114554 0.077059 0.02215999 14 0.133538 0.1284533 0.00508422 8.9612e-02 8.2394e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2763e-01 8.5308e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02521091 2.8659e-01 insignificant 1.0000e+00 insignificant 0.083614 0.0415686 0.0815656 14 0.155257 0.1075951 0.0476618 1.1490e-08 9.8315e-01 weaklyHypermeth 1.3844e-07 1.0000e+00 weaklyHypermeth 5.9346e-04 9.9976e-01 weaklyHypermeth 5.8758e-03 1.00000000 weaklyHypermeth 0.0733348 3.9834e-03 weaklyHypermeth 4.8484e-02 weaklyHypermeth 0.083467 0.077059 0.01352266 13 0.134978 0.1284533 0.00652459 2.2213e-01 6.7299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6093e-01 6.8610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0276621 2.8042e-01 insignificant 1.00000000 insignificant 0.0385523 0.077059 -0.09120403 14 0.0551007 0.1284533 -0.07335260 9.9455e-01 5.9229e-04 weaklyHypometh 1.0000000 5.7504e-03 weaklyHypometh 0.99992977 5.5101e-02 insignificant 1.00000 3.7484e-01 insignificant -0.04567266 1.1159e-01 insignificant 7.3412e-01 insignificant chr19 47467355 47468355 150767 ERF ENSG00000105722 0.951712 136 5 0.865490 98 5 0.956996 109 5 0.9078995 209 5 0.800000 77 5 0.7029129 183 5 0.938221 95 5 0.7245614 77 5 0.906580 97 5 0.815273 137 5 0.931009 115 5 0.833333 47 5 0.9142105 138 5 0.950000 59 4 0.8886154 122 5 0.763622 56 2 0.612463 54 4 0.7395258 208 5 0.7824090 72 5 0.907668 140 5 0.715705 80 6 0.7911111 81 5 0.745066 131 5 0.771062 55 5 0.8852453 87 5 0.879091 93 5 0.796416 128 5 0.830304 96 5 0.808799 69 5 0.925484 117 5 0.850441 125 5 0.9487365 196 5 0.8321891 116 5 0.8778509 65 5 0.9500000 47 4 0.9346405 49 3 0.705795 81 6 0.9544598 115 5 0.9709628 175 5 0.806562 186 5 0.9294099 169 5 0.796415 205 5 0.7442065 238 8 0.9303882 0.883177 0.975034 0.919779 0.978632 0.9822161 0.927715 0.918803 0.918744 0.9703369 0.894484 1.0000000 0.915171 0.971795 0.921341 0.8272081 0.721605 0.8454288 0.8836030 0.924625 0.878123 0.8581766 0.931956 0.909787 0.947723 0.947308 0.940167 0.912997 0.8144521 0.905864 0.920306 0.9292278 0.7866034 0.8760684 0.9603643 0.8726328 0.754710 0.9222779 0.934029 0.945083 0.8715800 0.944821 0.8939608 3 0.914683 0.902944 0.00262503 5 0.835144 0.860633 -0.0254889 0.7739672 4.5466e-01 insignificant 1 1.000000 insignificant 0.5644466 7.2164e-01 insignificant 1 1.000000 insignificant 1.5670e-02 0.606642 lowCoverage 1 lowCoverage 0.914980 0.8435518 0.0639683 5 0.854065 0.8723942 -0.0183290 3.2983e-02 9.3678e-01 weaklyHypermeth 1.6409e-01 1.0000e+00 insignificant 5.9256e-01 8.4094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03119739 5.0572e-01 lowCoverage 1.0000e+00 lowCoverage 0.915056 0.916752 -0.00032605 5 0.868659 0.8219406 0.04671819 6.2832e-01 3.5094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1560e-01 7.9903e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00488605 9.2248e-01 lowCoverage 1.0000e+00 lowCoverage 0.903045 0.8435518 0.0612928 5 0.848181 0.8723942 -0.0242129 1.0515e-01 9.8987e-01 insignificant 4.8016e-01 1.0000e+00 insignificant 7.4640e-01 8.7264e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0468674 3.2067e-01 lowCoverage 1.0000e+00 lowCoverage 0.902711 0.916752 -0.00621807 5 0.846697 0.8219406 0.02475596 5.9229e-01 5.9320e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7749e-01 5.5607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0205560 6.8125e-01 insignificant 1.00000000 insignificant 0.8435518 0.917526 -0.06894650 5 0.8723942 0.8391932 0.03320101 8.0345e-01 1.8827e-01 insignificant 1.0000000 8.9654e-01 insignificant 0.68587759 8.6289e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02631134 6.6185e-01 lowCoverage 1.0000e+00 lowCoverage chr19 47467593 47468593 150768 ERF ENSG00000105722 0.892392 402 11 0.826281 196 11 0.858056 269 11 0.9356597 478 11 0.691878 169 11 0.7570990 599 11 0.940516 182 11 0.8115439 264 11 0.767908 221 11 0.899424 289 11 0.944797 395 11 0.790210 84 8 0.8709745 359 11 0.953761 201 10 0.7613636 272 11 0.662592 82 3 0.667478 61 4 0.8167834 632 11 0.8111235 286 11 0.875491 419 11 0.787590 206 12 0.8896422 169 8 0.784288 324 11 0.802728 121 11 0.8627242 158 11 0.907524 293 11 0.713397 362 11 0.895399 196 11 0.835873 251 11 0.911463 297 11 0.883080 277 11 0.9516904 421 11 0.8001075 278 11 0.8507971 268 11 0.9095238 130 8 0.8734403 63 3 0.599609 162 12 0.9473203 371 11 0.9098131 377 11 0.882154 407 11 0.8931147 350 11 0.870322 573 11 0.8233729 429 14 0.9496080 0.932672 0.933767 0.946688 0.959029 0.9561416 0.920105 0.937568 0.926671 0.9674849 0.928712 0.9077398 0.933865 0.965269 0.916532 0.6736327 0.856727 0.8708394 0.9258570 0.943693 0.927536 0.8960480 0.934370 0.926982 0.961289 0.943553 0.909708 0.933972 0.8612909 0.935917 0.908544 0.9427215 0.8259602 0.7972863 0.8436410 0.9355600 0.807147 0.9261188 0.945055 0.957139 0.9232615 0.937443 0.9215552 6 0.927791 0.922251 0.00132526 11 0.774315 0.806106 -0.0317913 0.9024768 4.0657e-01 insignificant 1 1.000000 insignificant 0.9213860 5.0492e-01 insignificant 1 1.000000 insignificant -2.5350e-02 0.377120 insignificant 1 insignificant 0.927913 0.8655660 0.0611917 11 0.776874 0.7137746 0.0630997 3.7539e-03 7.7956e-01 weaklyHypermeth 2.2082e-02 1.0000e+00 weaklyHypermeth 6.3423e-01 7.4731e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00336645 9.5242e-01 insignificant 1.0000e+00 insignificant 0.927925 0.938670 -0.01123483 11 0.776874 0.8157990 -0.03892459 9.5292e-01 5.3622e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1543e-01 4.4224e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04898878 6.4013e-02 insignificant 9.0159e-01 insignificant 0.922349 0.8655660 0.0601611 11 0.794468 0.7137746 0.0806936 2.0726e-02 9.6527e-01 weaklyHypermeth 1.1326e-01 1.0000e+00 insignificant 5.7398e-01 9.2727e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0219836 6.9785e-01 insignificant 1.0000e+00 insignificant 0.922150 0.938670 -0.01290668 11 0.785696 0.8157990 -0.03010268 9.1474e-01 5.7773e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6564e-01 6.1248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0236387 3.5214e-01 insignificant 1.00000000 insignificant 0.8662470 0.939053 -0.07275738 11 0.7534288 0.8240841 -0.07065532 8.2324e-01 9.5229e-02 insignificant 1.0000000 4.8586e-01 insignificant 0.83745917 7.3717e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04562233 4.1950e-01 insignificant 1.0000e+00 insignificant chr19 47468139 47469139 150769 ERF ENSG00000105722 0.871146 387 12 0.743836 194 13 0.788198 205 8 0.9571998 440 12 0.669304 131 12 0.8155324 590 12 0.856443 118 8 0.7905443 267 12 0.685425 192 12 0.840320 223 12 0.869395 404 12 0.818182 76 8 0.8052481 325 11 0.974281 187 12 0.6935545 216 12 0.696429 29 1 0.527778 15 0 0.8938659 625 12 0.8134533 253 8 0.843881 419 14 0.844691 202 12 0.9258896 170 8 0.781161 244 12 0.843506 114 12 0.7848052 142 11 0.910264 276 12 0.681263 394 13 0.757303 145 11 0.821321 230 8 0.809565 272 12 0.771309 244 12 0.9011524 395 12 0.7032000 225 12 0.6905329 278 12 0.6845238 120 5 0.7291667 42 1 0.594779 150 12 0.9762291 318 8 0.9189788 285 12 0.923944 487 12 0.9143151 312 12 0.959294 448 11 0.8834675 419 15 0.9514710 0.948096 0.880141 0.963104 0.946342 0.9458018 0.923610 0.955636 0.909025 0.9702407 0.956127 0.8647472 0.961688 0.966691 0.921732 0.6516341 0.917241 0.8993241 0.9702463 0.954216 0.953267 0.9246184 0.905237 0.961050 0.955725 0.949976 0.887282 0.896026 0.9044562 0.961055 0.917349 0.9384807 0.8368825 0.7255772 0.7760359 0.9863616 0.846178 0.9512872 0.960582 0.967720 0.9652485 0.944692 0.9514441 4 0.925590 0.916166 0.00966367 12 0.749183 0.777564 -0.0283807 0.4888950 6.5150e-01 insignificant 1 1.000000 insignificant 0.8998995 6.9938e-01 insignificant 1 1.000000 insignificant -2.1652e-02 0.493620 insignificant 1 insignificant 0.925751 0.8596646 0.0667598 12 0.761049 0.6692071 0.0918418 3.7791e-05 9.6727e-01 weaklyHypermeth 2.7188e-04 1.0000e+00 weaklyHypermeth 5.1788e-01 9.5986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06796219 2.7676e-01 insignificant 1.0000e+00 insignificant 0.925737 0.959508 -0.02106061 12 0.749101 0.8252314 -0.07613009 9.9980e-01 1.2987e-02 weaklyHypometh 1.0000e+00 5.6465e-01 insignificant 9.9857e-01 3.2490e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.12229911 1.2302e-04 weaklyHypometh 2.0444e-02 weaklyHypometh 0.916076 0.8596646 0.0584980 12 0.766971 0.6692071 0.0977644 7.0510e-03 9.8861e-01 weaklyHypermeth 4.0523e-02 1.0000e+00 weaklyHypermeth 5.5388e-01 9.8659e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0896140 1.5978e-01 insignificant 8.7793e-01 insignificant 0.916047 0.959508 -0.03105914 12 0.755320 0.8252314 -0.06991136 9.9964e-01 7.9608e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9890e-01 3.1367e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1006473 7.3228e-04 weaklyHypometh 0.10461095 insignificant 0.8604240 0.959508 -0.08429653 12 0.7026674 0.8252314 -0.12256397 9.9788e-01 2.1206e-02 weaklyHypometh 1.0000000 1.3090e-01 insignificant 0.99483913 6.0151e-01 insignificant 1.00000 1.0000e+00 insignificant -0.19026130 1.4356e-02 weaklyHypometh 1.5273e-01 insignificant chr19 47468443 47469443 150770 ERF ENSG00000105722 0.907532 530 19 0.741214 275 19 0.879567 179 12 0.9545231 723 18 0.847659 112 12 0.8726224 607 17 0.740975 169 12 0.8566481 291 19 0.843088 293 17 0.879858 313 18 0.882149 393 20 0.805451 92 12 0.8977879 640 20 0.947097 279 20 0.8465609 296 15 0.833333 29 0 0.628205 33 0 0.8925564 893 18 0.8843554 348 15 0.890331 410 19 0.793373 155 11 0.9419276 211 18 0.824904 273 17 0.798280 122 15 0.8718549 227 20 0.936263 376 20 0.853061 429 22 0.750189 139 14 0.889131 312 15 0.862660 424 19 0.837807 315 19 0.9140789 539 21 0.7691133 185 15 0.8121293 348 20 0.6969697 115 7 0.8208333 74 2 0.764672 199 16 0.8878616 385 15 0.9677752 333 16 0.931038 691 18 0.9610596 388 15 0.947247 558 16 0.8577137 612 17 0.9297469 0.886241 0.892684 0.967001 0.943997 0.9313904 0.898166 0.937510 0.935514 0.9633178 0.938934 0.8378741 0.961541 0.929828 0.922916 0.8836501 0.848652 0.9309086 0.9493438 0.948841 0.900860 0.9577127 0.897865 0.944632 0.933112 0.950234 0.941085 0.825918 0.9271997 0.960185 0.935843 0.9397447 0.8575119 0.8863283 0.8924724 0.9701919 0.899884 0.8904810 0.965641 0.964269 0.9638176 0.964132 0.9378841 1 0.927009 0.925263 -0.00153916 20 0.848448 0.813408 0.0350394 0.9306676 6.4890e-01 insignificant 1 1.000000 insignificant 0.9743850 4.2667e-01 insignificant 1 1.000000 insignificant -4.5517e-03 0.851169 insignificant 1 insignificant 0.926967 0.8824885 0.0403159 20 0.836323 0.7412059 0.0951174 5.0545e-07 5.8267e-01 weaklyHypermeth 4.3953e-06 1.0000e+00 weaklyHypermeth 7.5191e-01 4.0352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05964586 8.6871e-02 insignificant 5.4636e-01 insignificant 0.927091 0.960883 -0.02387733 16 0.865569 0.8830202 -0.01745130 9.9619e-01 7.1482e-03 weaklyHypometh 1.0000e+00 4.0952e-01 insignificant 9.9455e-01 5.2544e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.08139108 1.0004e-02 weaklyHypometh 2.7788e-01 insignificant 0.925547 0.8819923 0.0416519 20 0.844693 0.7383390 0.1063540 3.4495e-04 9.5880e-01 weaklyHypermeth 2.4464e-03 1.0000e+00 weaklyHypermeth 5.1863e-01 8.5212e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0641976 6.9576e-02 insignificant 4.7330e-01 insignificant 0.926010 0.960883 -0.02238615 16 0.867914 0.8830202 -0.01510626 9.7169e-01 6.7989e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7699e-01 1.7818e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0768393 1.4712e-02 weaklyHypometh 0.49041597 insignificant 0.8838462 0.960883 -0.06485378 16 0.8056586 0.8830202 -0.07736153 9.4128e-01 9.9026e-04 weaklyHypometh 1.0000000 9.5217e-03 weaklyHypometh 0.87417572 5.7414e-01 insignificant 1.00000 1.0000e+00 insignificant -0.14103694 2.1703e-03 weaklyHypometh 5.3690e-02 weaklyHypometh chr19 47469926 47470926 150771 ERF ENSG00000105722 0.817235 119 4 0.671295 47 5 0.480952 22 3 0.9383804 115 4 0.360000 14 1 0.6342593 65 3 0.833333 16 0 0.7386243 59 5 0.612188 55 4 0.767857 29 4 0.726976 120 6 0.708333 13 0 0.7904412 103 5 0.909091 11 1 0.4666667 24 3 0.333333 11 0 0.250000 15 1 0.9574074 95 4 0.9107143 44 5 0.489240 74 3 0.630272 64 4 0.8766857 82 5 0.591979 45 4 0.742222 27 2 0.9038462 64 4 0.841298 90 5 0.824653 90 5 0.451705 35 2 0.871510 86 5 0.898298 80 6 0.905616 88 6 0.6801587 88 4 0.6006944 55 4 0.6244249 114 5 0.3333333 40 1 0.7875000 20 2 0.660967 86 4 0.7257695 85 6 0.8373016 36 4 0.880648 112 5 0.8342193 62 4 0.880556 47 4 0.9595960 83 4 0.8881738 0.722543 0.371978 0.912176 0.265385 0.6217949 0.828526 0.717979 0.546483 0.8598901 0.800559 0.7115385 0.801471 NA 0.534615 0.2973194 0.297319 0.9469373 0.8598901 0.631939 0.734661 0.7722332 0.753208 0.572650 0.874260 0.790862 0.747596 0.406031 0.7556561 0.791695 0.889034 0.7360043 0.6942308 0.5368667 0.3042899 0.7192308 0.610880 0.5614119 0.810134 0.892072 0.9056990 0.911325 0.9407051 0 0.779258 0.786651 -0.01297007 5 0.670783 0.677955 -0.0071712 0.9234294 7.7586e-01 insignificant 1 1.000000 insignificant 0.8777238 7.9785e-01 insignificant 1 1.000000 insignificant -9.8371e-02 0.134770 lowCoverage 1 lowCoverage 0.779258 0.6775000 0.0786633 5 0.670783 0.7056945 -0.0349110 3.1093e-02 9.4687e-01 weaklyHypermeth 1.5546e-01 1.0000e+00 insignificant 8.5673e-02 2.9667e-01 insignificant 4.2623e-01 1.0000e+00 insignificant 0.04770147 5.6170e-01 lowCoverage 1.0000e+00 lowCoverage 0.791868 0.882353 -0.10064751 4 0.811045 0.8944877 -0.08344304 9.4092e-01 8.0947e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5670e-01 4.3121e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.20864764 5.9801e-04 lowCoverage 5.4365e-02 lowCoverage 0.786651 0.6775000 0.1138301 5 0.677955 0.7056945 -0.0277398 5.6845e-03 9.4834e-01 weaklyHypermeth 3.3438e-02 1.0000e+00 weaklyHypermeth 1.1270e-02 8.9164e-01 weaklyHypermeth 8.1978e-02 1.00000000 weaklyHypermeth 0.1460720 8.9002e-02 lowCoverage 5.5976e-01 lowCoverage 0.789916 0.882353 -0.09516157 4 0.820606 0.8944877 -0.07388139 9.1385e-01 2.1754e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7114e-01 9.9331e-03 lowCoverage 1.0000e+00 6.2082e-01 lowCoverage -0.1102771 3.8568e-02 lowCoverage 0.87653518 lowCoverage 0.6775819 0.882353 -0.18170634 4 0.6909260 0.8944877 -0.20356166 8.8958e-01 8.9309e-06 lowCoverage 1.0000000 1.3134e-04 lowCoverage 0.92666158 3.9667e-03 lowCoverage 1.00000 4.5076e-02 lowCoverage -0.25634911 8.7532e-03 lowCoverage 1.1222e-01 lowCoverage chr19 49903977 49904977 150786 CEACAM16 ENSG00000213892 0.902294 201 4 0.785291 217 5 0.750767 114 5 0.9379936 275 4 0.770202 95 3 0.9365707 274 5 0.844291 170 5 0.9164056 131 5 0.830909 108 3 0.811584 56 3 0.893806 207 5 0.928421 71 3 0.9202586 96 3 0.621102 57 2 0.9113792 143 5 0.884615 51 3 0.906250 31 2 0.9405999 225 4 0.8986157 180 5 0.856053 188 5 0.859532 70 5 0.8837838 55 4 0.925414 137 5 0.873542 70 3 0.9277778 149 4 0.885460 200 5 0.956430 86 5 0.990909 69 3 0.860898 157 5 0.888690 230 5 0.936132 202 5 0.8729073 195 5 0.6529511 142 5 0.8051500 123 5 0.5913043 124 4 0.7500000 39 2 0.769290 195 5 0.6361444 195 5 0.8992609 182 4 0.927906 204 5 0.8870248 164 5 0.911472 176 4 0.8715102 150 4 0.8977202 0.853684 0.830819 0.957202 0.820087 0.9398187 0.816032 0.879351 0.829506 0.8695740 0.853203 0.8548094 0.917648 0.851262 0.910762 0.8883179 0.834355 0.9509652 0.9166254 0.915806 0.914063 0.9412861 0.905974 0.922920 0.961686 0.867133 0.945843 0.974334 0.9221056 0.863945 0.898612 0.8973637 0.8334712 0.8484179 0.7577774 0.9279265 0.852360 0.6182561 0.936044 0.951551 0.8862403 0.936444 0.8713758 2 0.887543 0.908642 -0.02392427 5 0.882872 0.907593 -0.0247207 0.9835007 5.0000e-02 weaklyHypometh 1 1.000000 insignificant 0.9790180 1.0248e-02 weaklyHypometh 1 0.853993 insignificant -4.2753e-02 0.059373 lowCoverage 1 lowCoverage 0.887543 0.7053790 0.1653712 5 0.882872 0.6669199 0.2159522 9.8587e-13 9.9999e-01 weaklyHypermeth 1.3885e-11 1.0000e+00 weaklyHypermeth 4.3540e-04 6.6182e-01 weaklyHypermeth 4.2686e-03 1.0000e+00 weaklyHypermeth 0.16156375 3.4532e-03 lowCoverage 4.1605e-02 lowCoverage 0.887543 0.902968 -0.01981803 4 0.882872 0.8989862 -0.01611396 3.4228e-01 4.1903e-02 lowCoverage 1.0000e+00 9.0483e-01 lowCoverage 8.3832e-01 1.5840e-02 lowCoverage 1.0000e+00 0.76400519 lowCoverage -0.03706426 8.5668e-02 lowCoverage 1.0000e+00 lowCoverage 0.908642 0.7053790 0.1919756 5 0.907593 0.6669199 0.2406729 9.1584e-12 9.9999e-01 weaklyHypermeth 1.4323e-10 1.0000e+00 weaklyHypermeth 2.0379e-04 8.6249e-01 weaklyHypermeth 2.3697e-03 1.00000000 weaklyHypermeth 0.2043163 1.2949e-03 lowCoverage 2.0885e-02 lowCoverage 0.908642 0.902968 0.00773942 4 0.907593 0.8989862 0.00860672 2.3512e-01 1.9436e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2258e-01 2.6194e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0056883 7.1841e-01 lowCoverage 1.00000000 lowCoverage 0.7053790 0.902968 -0.17886711 4 0.6669199 0.8989862 -0.23206621 9.9996e-01 1.6153e-06 lowCoverage 1.0000000 2.8932e-05 lowCoverage 0.97467348 2.3218e-03 lowCoverage 1.00000 2.8315e-02 lowCoverage -0.19862801 1.7448e-03 lowCoverage 4.7156e-02 lowCoverage chr19 49917004 49918004 150788 CEACAM16 ENSG00000213892 0.805976 210 5 0.755427 130 5 0.696067 135 5 0.9102165 215 5 0.941013 54 4 0.8896649 209 5 0.796667 133 5 0.8905930 90 5 0.798761 83 5 0.876364 61 4 0.799756 177 5 0.855249 65 4 0.8835266 122 5 0.888889 9 1 0.8632479 110 4 0.897321 46 4 0.756275 56 5 0.6915302 289 5 0.8848297 89 5 0.821096 186 5 0.876987 73 4 0.7801338 119 4 0.827600 134 4 0.832750 75 5 0.8970099 83 5 0.825954 116 5 0.729412 71 4 0.727327 69 4 0.742729 74 5 0.808832 130 5 0.835404 138 5 0.8887575 255 5 0.3093182 114 5 0.4131916 71 5 0.3855172 207 3 0.4971113 49 4 0.538474 100 5 0.5843816 135 5 0.8383644 288 5 0.794982 257 5 0.8230744 246 5 0.743295 250 4 0.8129251 267 5 0.8204767 0.753640 0.725319 0.893017 0.927893 0.8858359 0.825892 0.903743 0.828828 0.8510288 0.800877 0.8554991 0.860922 NA 0.837900 0.8958809 0.795033 0.7388506 0.8759699 0.827621 0.927136 0.7864463 0.790759 0.799754 0.897879 0.804218 0.782080 0.786986 0.7753151 0.799322 0.817054 0.9178231 0.2572016 0.3141581 0.2983334 0.5048551 0.553401 0.5506062 0.825890 0.767655 0.8252358 0.801258 0.8092138 4 0.818145 0.833957 -0.01097482 5 0.821490 0.837111 -0.0156211 0.9101311 2.7556e-01 insignificant 1 1.000000 insignificant 0.3691730 7.4009e-01 insignificant 1 1.000000 insignificant 2.0715e-02 0.381402 lowCoverage 1 lowCoverage 0.818145 0.5118343 0.3088212 5 0.821490 0.5446303 0.2768593 2.6848e-16 1.0000e+00 hypermethylated 4.9719e-15 1.0000e+00 hypermethylated 7.8620e-10 1.0000e+00 hypermethylated 2.9118e-08 1.0000e+00 hypermethylated 0.38045777 9.9269e-05 lowCoverage 2.8363e-03 lowCoverage 0.818145 0.775229 0.02462226 5 0.821490 0.8139703 0.00751922 1.0420e-01 3.2799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0070e-03 4.8086e-01 weaklyHypermeth 1.4727e-01 1.00000000 insignificant 0.03259526 1.7682e-01 lowCoverage 1.0000e+00 lowCoverage 0.833957 0.5118343 0.3112267 5 0.837111 0.5446303 0.2924804 3.7886e-12 1.0000e+00 hypermethylated 6.5320e-11 1.0000e+00 hypermethylated 3.7980e-09 1.0000e+00 hypermethylated 1.5825e-07 1.00000000 hypermethylated 0.3597423 1.2370e-04 lowCoverage 3.6381e-03 lowCoverage 0.833957 0.775229 0.02842377 5 0.837111 0.8139703 0.02314034 2.4863e-01 6.9933e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1559e-01 7.9016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0118798 6.2483e-01 lowCoverage 1.00000000 lowCoverage 0.5118343 0.775229 -0.27790670 5 0.5446303 0.8139703 -0.26934009 1.0000e+00 2.3289e-06 hypomethylated 1.0000000 3.8815e-05 hypomethylated 0.99999992 6.2800e-07 hypomethylated 1.00000 4.1867e-05 hypomethylated -0.34786251 1.7784e-04 lowCoverage 1.1856e-02 lowCoverage chr19 50336979 50337979 150794 ENSG00000213043 0.914750 299 6 0.931014 169 6 0.806351 133 6 0.9546054 308 6 0.962858 102 6 0.9556895 308 6 0.913636 112 6 0.9463392 163 6 0.880060 117 6 0.986178 103 6 0.927388 224 6 0.874074 44 3 0.9562811 182 6 0.650000 33 2 0.9514544 127 6 1.000000 29 4 1.000000 17 0 0.8165506 378 6 0.9384817 168 6 0.955819 254 6 0.770635 71 6 0.9244318 87 6 0.995238 200 6 0.841307 90 5 0.9705128 239 6 0.955629 273 6 0.824528 94 5 0.763690 48 5 0.974808 167 4 0.968358 271 6 0.972730 294 6 0.9517828 337 6 0.8958927 151 6 0.9880952 99 6 0.9846154 74 3 0.9709596 58 4 0.940476 108 6 0.9449545 264 6 0.9340687 186 6 0.979469 239 6 0.9805196 259 6 0.952410 295 6 0.9275615 196 6 0.9207976 0.879637 0.856579 0.963946 0.955686 0.9553257 0.940948 0.946792 0.906371 0.9738355 0.928229 0.9161877 0.956976 0.958671 0.967663 1.0000000 1.000000 0.9505287 0.9520672 0.961131 0.868740 0.9443819 0.991256 0.802579 0.943866 0.944608 0.865278 0.794535 0.9746854 0.962454 0.980838 0.9553039 0.8872433 0.9935345 0.9643606 0.9654846 0.927545 0.9493855 0.958031 0.975655 0.9776906 0.936479 0.9299841 2 0.941843 0.947005 -0.00282314 6 0.938892 0.941939 -0.0030472 0.7274104 2.9587e-01 insignificant 1 1.000000 insignificant 0.3402128 8.9850e-01 insignificant 1 1.000000 insignificant 6.6055e-03 0.830776 insignificant 1 insignificant 0.941266 0.9403183 0.0014188 6 0.704169 0.9509297 -0.2467606 5.9948e-01 8.1453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5593e-01 2.5572e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03808915 1.1431e-01 insignificant 6.6077e-01 insignificant 0.941843 0.954043 -0.01123507 6 0.938892 0.9527720 -0.01387980 9.3821e-01 2.4492e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4233e-01 4.9850e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03872940 8.3203e-02 insignificant 1.0000e+00 insignificant 0.947005 0.9401596 0.0062017 6 0.941939 0.9345729 0.0073664 4.7024e-01 6.4828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6975e-01 1.6158e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0446946 1.3445e-01 insignificant 7.8169e-01 insignificant 0.947005 0.954043 -0.00689638 6 0.941939 0.9527720 -0.01083264 6.1129e-01 6.2027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0300e-01 3.3339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0453349 1.1360e-01 insignificant 1.00000000 insignificant 0.9401596 0.954043 -0.01230770 6 0.9345729 0.9527720 -0.01819906 5.7299e-01 2.1520e-01 insignificant 1.0000000 9.9629e-01 insignificant 0.42561490 7.1501e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00064025 9.7239e-01 insignificant 1.0000e+00 insignificant chr19 50340601 50341601 150796 ENSG00000213043 0.793675 579 22 0.876642 616 16 0.887689 695 22 0.8935164 698 18 0.911320 369 15 0.8761260 692 22 0.885030 547 21 0.8277500 605 20 0.822221 435 19 0.858958 516 24 0.849769 654 21 0.864313 323 19 0.8201647 554 21 0.838853 184 12 0.8918984 560 21 0.859369 308 19 0.957833 230 9 0.8464688 803 20 0.9088961 579 17 0.882363 597 23 0.720430 278 20 0.8822801 309 17 0.713310 452 22 0.794365 246 18 0.8168104 336 18 0.893746 713 22 0.667378 421 19 0.810260 314 20 0.813700 464 16 0.965852 918 22 0.833233 857 20 0.8219935 663 22 0.8405177 577 21 0.9018802 534 21 0.6889873 549 12 0.7223058 227 13 0.625820 391 19 0.7654900 774 22 0.8228214 599 19 0.897169 807 21 0.9217590 531 17 0.922156 637 17 0.9151228 737 19 0.9142380 0.878689 0.885843 0.925035 0.862473 0.9021473 0.900750 0.922534 0.902135 0.9213750 0.901858 0.9136242 0.923594 0.927059 0.916661 0.9070153 0.929146 0.9106784 0.9471408 0.939104 0.868337 0.9102634 0.909226 0.891955 0.893456 0.927434 0.854741 0.919510 0.8988395 0.959010 0.933195 0.8972985 0.8358023 0.9240813 0.9211840 0.8096994 0.907210 0.8800469 0.909789 0.945585 0.9008320 0.892628 0.9354641 14 0.908479 0.903534 -0.00146430 21 0.802767 0.770827 0.0319393 0.7490358 8.6431e-01 insignificant 1 1.000000 insignificant 0.6582210 9.6935e-01 insignificant 1 1.000000 insignificant 5.6530e-02 0.042704 weaklyHypermeth 1 insignificant 0.910284 0.8643512 0.0403248 19 0.838098 0.6764090 0.1616891 2.4430e-13 9.7367e-01 weaklyHypermeth 3.5926e-12 1.0000e+00 weaklyHypermeth 4.3636e-03 8.3622e-01 weaklyHypermeth 3.2323e-02 1.0000e+00 weaklyHypermeth 0.11014269 4.3795e-02 weaklyHypermeth 3.1060e-01 insignificant 0.909247 0.935367 -0.01010393 20 0.822209 0.8284026 -0.00619368 8.8042e-01 1.6638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3740e-01 3.4839e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02816284 2.2309e-01 insignificant 1.0000e+00 insignificant 0.905090 0.8643512 0.0411528 19 0.782356 0.6764090 0.1059473 8.8119e-04 9.9548e-01 weaklyHypermeth 5.7594e-03 1.0000e+00 weaklyHypermeth 2.5303e-01 9.2006e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0536130 2.9155e-01 insignificant 1.0000e+00 insignificant 0.906334 0.935367 -0.00843757 20 0.776230 0.8284026 -0.05217246 9.6110e-01 1.4709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3939e-01 3.7828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0846925 1.4516e-02 weaklyHypometh 0.49041597 insignificant 0.8653530 0.935913 -0.03492455 18 0.7036685 0.8438736 -0.14020509 9.9980e-01 9.0055e-02 insignificant 1.0000000 4.6661e-01 insignificant 0.99389350 2.0761e-01 insignificant 1.00000 1.0000e+00 insignificant -0.13830553 1.8844e-02 weaklyHypometh 1.9427e-01 insignificant chr19 50406541 50407541 150797 BLOC1S3 ENSG00000189114 0.649591 145 7 0.492684 269 6 0.580357 253 8 0.6487500 108 5 0.646985 125 7 0.7197588 249 8 0.727153 152 8 0.7121878 227 7 0.562810 230 7 0.772692 204 8 0.730106 328 9 0.723393 150 6 0.6403554 270 7 0.750671 100 6 0.6529903 231 6 0.554266 113 6 0.436608 68 4 0.2894658 93 5 0.8754696 358 8 0.587107 158 6 0.632533 106 8 0.4880747 108 4 0.651757 125 7 0.363391 112 6 0.6633670 74 4 0.754583 363 8 0.627610 253 8 0.546856 68 4 0.800071 289 8 0.775577 430 8 0.594316 447 7 0.7069247 284 7 0.2838678 374 8 0.5777355 229 7 0.2850316 194 7 0.1857143 49 4 0.471842 141 9 0.4747633 401 7 0.4787463 193 7 0.417140 164 6 0.1711360 80 5 0.281456 166 5 0.4699939 83 5 0.5943199 0.568327 0.417392 0.514207 0.685803 0.5715364 0.690720 0.776037 0.612975 0.7012802 0.729455 0.6201494 0.613187 0.649401 0.645494 0.5257242 0.503250 0.2998060 0.7311034 0.680569 0.663397 0.2727597 0.613436 0.485945 0.584297 0.674296 0.613767 0.673703 0.6480952 0.623694 0.562801 0.6490948 0.0813486 0.3746735 0.0184825 0.0349515 0.392083 0.1454015 0.285519 0.336401 0.2826114 0.230858 0.3336415 4 0.642913 0.655134 -0.00221332 5 0.731296 0.637861 0.0934351 0.2935133 4.4995e-01 insignificant 1 1.000000 insignificant 0.0514428 6.2647e-01 insignificant 1 1.000000 insignificant 3.9150e-03 0.933600 insignificant 1 insignificant 0.642820 0.2507205 0.4198481 5 0.706868 0.4103490 0.2965193 1.4401e-20 9.9887e-01 hypermethylated 3.8921e-19 1.0000e+00 hypermethylated 1.1992e-07 9.9708e-01 hypermethylated 2.7255e-06 1.0000e+00 hypermethylated 0.25784437 5.9995e-03 weaklyHypermeth 6.2766e-02 weaklyHypermeth 0.643549 0.354227 0.28700759 5 0.744222 0.4395741 0.30464765 2.1072e-14 9.9993e-01 hypermethylated 2.6340e-12 1.0000e+00 hypermethylated 1.2180e-08 9.9964e-01 hypermethylated 2.0300e-06 1.00000000 hypermethylated 0.27397548 6.0275e-03 weaklyHypermeth 2.1527e-01 insignificant 0.654991 0.2507205 0.4133476 8 0.627666 0.4103490 0.2173174 3.4722e-17 9.9970e-01 hypermethylated 1.0212e-15 1.0000e+00 hypermethylated 3.5854e-05 9.9762e-01 hypermethylated 5.1220e-04 1.00000000 hypermethylated 0.2539294 6.4572e-03 weaklyHypermeth 6.8694e-02 weaklyHypermeth 0.655459 0.354227 0.27895565 6 0.640433 0.4395741 0.20085891 2.2122e-11 9.9987e-01 hypermethylated 2.4580e-09 1.0000e+00 hypermethylated 1.8876e-05 9.9988e-01 hypermethylated 2.1544e-03 1.0000e+00 hypermethylated 0.2700605 5.9228e-03 weaklyHypermeth 0.31172570 insignificant 0.2505431 0.354227 -0.16094427 6 0.4228125 0.4395741 -0.01676165 9.4156e-01 1.7023e-03 weaklyHypometh 1.0000000 1.5199e-02 weaklyHypometh 0.95346443 3.6153e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01613111 8.5459e-01 insignificant 1.0000e+00 insignificant chr19 50406969 50407969 150798 BLOC1S3 ENSG00000189114 0.634632 147 7 0.462349 273 6 0.588203 256 8 0.6877778 112 5 0.686209 128 7 0.7111444 257 9 0.721654 155 8 0.7163892 231 7 0.557100 232 7 0.797948 205 8 0.757095 339 10 0.723393 150 6 0.6853110 279 8 0.757718 105 7 0.6915469 235 6 0.554266 113 6 0.436608 68 4 0.2894658 93 5 0.8479226 363 9 0.638719 162 6 0.663155 110 8 0.4880747 108 4 0.686582 128 7 0.415941 121 7 0.7007706 75 4 0.781851 368 9 0.664849 257 8 0.542596 70 4 0.820064 294 9 0.800513 433 8 0.625503 455 8 0.7435591 287 7 0.3221477 380 9 0.6199620 230 7 0.3244026 199 8 0.1857143 49 4 0.482522 146 10 0.5331229 405 7 0.4642050 196 7 0.500406 167 6 0.1540224 81 5 0.384106 167 5 0.5457091 85 5 0.5943199 0.568327 0.417392 0.514207 0.685803 0.5715364 0.690720 0.776037 0.612975 0.7012802 0.729455 0.6201494 0.613187 0.649401 0.645494 0.5257242 0.503250 0.2998060 0.7311034 0.680569 0.663397 0.2727597 0.613436 0.485945 0.584297 0.674296 0.613767 0.673703 0.6480952 0.623694 0.562801 0.6490948 0.0813486 0.3746735 0.0184825 0.0349515 0.392083 0.1454015 0.285519 0.336401 0.2826114 0.230858 0.3336415 4 0.645913 0.660015 -0.00468280 5 0.737008 0.660808 0.0762005 0.3919754 2.5505e-01 insignificant 1 1.000000 insignificant 0.0850988 3.8524e-01 insignificant 1 1.000000 insignificant -1.3849e-02 0.770951 insignificant 1 insignificant 0.645823 0.2576295 0.4136823 5 0.715092 0.4356771 0.2794152 2.6324e-20 9.9942e-01 hypermethylated 6.2676e-19 1.0000e+00 hypermethylated 2.3695e-07 9.9737e-01 hypermethylated 5.0602e-06 1.0000e+00 hypermethylated 0.23596078 1.3233e-02 weaklyHypermeth 1.1856e-01 insignificant 0.646545 0.359195 0.28421387 5 0.749798 0.4632492 0.28654837 3.6085e-14 9.9996e-01 hypermethylated 4.0094e-12 1.0000e+00 hypermethylated 2.7295e-08 9.9956e-01 hypermethylated 3.8993e-06 1.00000000 hypermethylated 0.23758304 2.1714e-02 weaklyHypermeth 4.7055e-01 insignificant 0.659882 0.2576295 0.4102760 8 0.653375 0.4356771 0.2176980 2.2472e-18 9.9993e-01 hypermethylated 7.0226e-17 1.0000e+00 hypermethylated 2.1638e-05 9.9911e-01 hypermethylated 3.2785e-04 1.00000000 hypermethylated 0.2498098 1.0170e-02 weaklyHypermeth 9.8735e-02 weaklyHypermeth 0.660356 0.359195 0.27833542 6 0.667318 0.4632492 0.20406903 9.4100e-12 9.9997e-01 hypermethylated 1.1763e-09 1.0000e+00 hypermethylated 1.9390e-05 9.9995e-01 hypermethylated 2.1544e-03 1.0000e+00 hypermethylated 0.2514320 1.6868e-02 weaklyHypermeth 0.52713975 insignificant 0.2574893 0.359195 -0.15842176 6 0.4493100 0.4632492 -0.01393916 9.4193e-01 2.7475e-03 weaklyHypometh 1.0000000 2.3088e-02 weaklyHypometh 0.95541746 4.2001e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00162226 9.8682e-01 insignificant 1.0000e+00 insignificant chr19 50440087 50441087 150800 EXOC3L2 ENSG00000130201 0.832283 305 8 0.703447 175 8 0.700530 195 8 0.8319243 267 8 0.742532 65 6 0.8238418 298 8 0.685773 112 8 0.7078098 217 8 0.718300 148 8 0.790463 177 8 0.840352 226 8 0.639762 86 7 0.6165796 213 8 NA 0 0 0.7437425 158 8 0.732062 87 5 0.441368 131 8 0.5062993 245 8 0.6179315 118 6 0.719823 290 8 0.834673 78 7 0.5009260 136 8 0.803625 250 8 0.770126 84 8 0.8035277 95 5 0.805936 268 8 0.659597 127 8 0.664394 49 5 0.753074 146 8 0.689389 246 8 0.770843 236 8 0.7781251 438 8 0.3993016 183 8 0.6414499 147 8 0.5714286 118 7 0.1287202 77 5 0.528205 75 7 0.5484489 267 8 0.7240580 236 8 0.723744 289 8 0.6625376 229 8 0.564730 203 8 0.7836479 287 8 0.8436634 0.706915 0.718678 0.828155 0.817826 0.7957312 0.706343 0.704847 0.737675 0.7837781 0.837482 0.5750212 0.572033 NA 0.722260 0.7767162 0.429585 0.5107226 0.5930004 0.688660 0.826601 0.4957122 0.786401 0.800623 0.753800 0.796635 0.686305 0.710750 0.7500575 0.664179 0.725420 0.7942167 0.2974567 0.6090968 0.3706089 0.1037919 0.406344 0.4852424 0.741108 0.686390 0.6898287 0.531764 0.7589522 5 0.699118 0.736647 -0.03513426 8 0.710084 0.745236 -0.0351522 0.8882073 1.1594e-01 insignificant 1 1.000000 insignificant 0.7179357 3.0158e-01 insignificant 1 1.000000 insignificant -3.1195e-02 0.400488 insignificant 1 insignificant 0.699118 0.4855825 0.2174963 8 0.710084 0.5026634 0.2074208 1.6762e-13 7.9100e-01 hypermethylated 2.5398e-12 1.0000e+00 hypermethylated 1.6393e-07 8.7303e-01 hypermethylated 3.6430e-06 1.0000e+00 hypermethylated 0.23539847 2.4570e-02 weaklyHypermeth 2.0306e-01 insignificant 0.699118 0.685691 0.01102071 8 0.710084 0.7095401 0.00054414 6.6605e-01 7.2284e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6980e-01 9.3847e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01324734 7.7330e-01 insignificant 1.0000e+00 insignificant 0.736647 0.4855825 0.2509074 8 0.745236 0.5026634 0.2425730 2.8101e-13 9.1875e-01 hypermethylated 5.4361e-12 1.0000e+00 hypermethylated 5.5271e-07 9.6659e-01 hypermethylated 1.2902e-05 1.00000000 hypermethylated 0.2665940 1.4688e-02 weaklyHypermeth 1.3353e-01 insignificant 0.736647 0.685691 0.04387357 8 0.745236 0.7095401 0.03569635 2.0407e-01 8.8540e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5329e-01 9.8310e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0444428 3.5962e-01 insignificant 1.00000000 insignificant 0.4855825 0.685691 -0.22927414 8 0.5026634 0.7095401 -0.20687666 9.5877e-01 6.2090e-06 hypomethylated 1.0000000 9.4634e-05 hypomethylated 0.97978043 3.9099e-04 hypomethylated 1.00000 7.1438e-03 hypomethylated -0.22215112 3.2509e-02 weaklyHypometh 2.9608e-01 insignificant chr19 51129224 51130224 150806 NANOS2 ENSG00000188425 0.830787 250 8 0.601430 267 8 0.490625 183 8 0.7091149 271 8 0.883854 89 5 0.7607623 380 8 0.627865 138 8 0.7697498 231 8 0.713201 251 8 0.782043 283 8 0.732490 193 8 0.595232 82 6 0.3760215 366 8 0.696332 214 8 0.6738038 285 8 0.781250 43 4 0.570387 42 5 0.6514227 374 8 0.5440012 161 7 0.578123 261 8 0.670061 85 7 0.3801550 208 8 0.749395 203 8 0.592428 89 8 0.7184018 103 7 0.717536 300 8 0.590484 150 8 0.584104 81 7 0.613689 237 8 0.629558 349 8 0.620178 282 8 0.8092018 267 8 0.2528768 289 8 0.1168831 101 5 0.6875000 19 1 0.2460317 30 2 0.310161 253 8 0.2717559 287 8 0.5462074 227 8 0.521825 240 8 0.4904680 250 7 0.530119 238 8 0.6185169 211 8 0.7979824 0.578310 0.481812 0.681230 0.868816 0.7200618 0.623434 0.750194 0.697106 0.8456789 0.726120 0.6280337 0.372084 0.669609 0.663102 0.7000000 0.556335 0.6096879 0.5038624 0.567983 0.607158 0.3293223 0.731989 0.548599 0.729131 0.697640 0.590101 0.815135 0.6074983 0.606698 0.615677 0.7821942 0.2180414 0.2008532 0.3928396 0.2193413 0.319220 0.2609421 0.530940 0.513304 0.4787803 0.533276 0.6024665 3 0.660403 0.643707 0.00709161 8 0.634670 0.574140 0.0605300 0.6451026 5.5960e-01 insignificant 1 1.000000 insignificant 0.7688962 4.7093e-01 insignificant 1 1.000000 insignificant 2.8825e-02 0.496256 insignificant 1 insignificant 0.660477 0.2832311 0.3757963 8 0.668338 0.2773648 0.3909729 3.6777e-27 1.0000e+00 hypermethylated 1.4711e-25 1.0000e+00 hypermethylated 1.4432e-12 1.0000e+00 hypermethylated 8.4895e-11 1.0000e+00 hypermethylated 0.35422331 5.0605e-03 weaklyHypermeth 5.6793e-02 weaklyHypermeth 0.660477 0.571184 0.09094678 8 0.668338 0.5415169 0.12682083 1.0137e-04 9.2935e-01 weaklyHypermeth 3.7545e-03 1.0000e+00 weaklyHypermeth 1.9264e-04 9.8202e-01 weaklyHypermeth 1.2040e-02 1.00000000 weaklyHypermeth 0.12699748 1.8412e-03 weaklyHypermeth 1.0239e-01 insignificant 0.644104 0.2829418 0.3698971 8 0.582378 0.2465465 0.3358314 3.1540e-19 1.0000e+00 hypermethylated 1.0174e-17 1.0000e+00 hypermethylated 2.9974e-10 1.0000e+00 hypermethylated 1.4987e-08 1.00000000 hypermethylated 0.3253978 7.3067e-03 weaklyHypermeth 7.5327e-02 weaklyHypermeth 0.644378 0.571184 0.09756297 8 0.655175 0.5415169 0.11365832 1.6470e-03 9.9820e-01 weaklyHypermeth 4.0171e-02 1.0000e+00 weaklyHypermeth 7.7923e-04 9.9978e-01 weaklyHypermeth 4.5837e-02 1.0000e+00 weaklyHypermeth 0.0981720 2.0778e-02 weaklyHypermeth 0.57715606 insignificant 0.2832311 0.571184 -0.27080239 8 0.2773648 0.5415169 -0.26415206 1.0000e+00 2.6076e-11 hypomethylated 1.0000000 8.9916e-10 hypomethylated 1.00000000 1.5261e-07 hypomethylated 1.00000 1.2718e-05 hypomethylated -0.22722583 3.4222e-02 weaklyHypometh 3.0831e-01 insignificant chr19 51922341 51923341 150825 PRKD2 ENSG00000105287 0.932090 163 6 0.947706 96 6 0.930294 117 6 0.9185548 177 6 0.892063 39 6 0.7996698 288 6 0.833333 22 0 0.9259701 237 6 0.907845 103 6 0.924334 193 6 0.957150 205 6 0.904762 27 2 0.9398535 253 6 0.854167 125 6 0.9174718 117 6 NA 0 0 0.750000 3 0 0.9551881 228 6 0.9471343 202 6 0.938493 149 6 0.912584 114 6 0.9242239 111 6 0.883673 90 6 0.876856 117 6 0.9807692 131 6 0.970554 192 6 0.833589 220 6 0.944444 12 0 0.882890 140 6 0.944827 201 6 0.947150 162 6 0.9673765 190 6 0.9595238 115 6 0.9652778 83 6 0.9888889 185 6 0.7916667 12 0 0.811445 110 6 0.9546987 170 6 0.9714286 58 6 0.925277 199 6 0.9673265 129 6 0.950231 66 6 0.9670588 114 6 0.9326461 0.949270 0.918336 0.914322 0.854747 0.9274676 0.854545 0.924968 0.893630 0.9109185 0.952220 0.9030303 0.941220 0.860795 0.914141 NA 0.850681 0.9514949 0.9493956 0.920932 0.920680 0.9206105 0.872165 0.869267 0.978322 0.967374 0.838763 0.930303 0.8833325 0.942714 0.944786 0.9590723 0.9555844 0.9617424 0.9860606 0.8022727 0.803090 0.9575044 0.958182 0.919585 0.9625450 0.952588 0.9661604 0 0.924198 0.919643 0.00619405 6 0.909239 0.931594 -0.0223545 0.4990721 8.4139e-01 insignificant 1 1.000000 insignificant 0.9092543 7.0480e-01 insignificant 1 1.000000 insignificant -1.8407e-02 0.324170 lowCoverage 1 lowCoverage 0.924425 0.9437037 -0.0170093 6 0.927446 0.9436800 -0.0162344 9.1725e-01 1.5230e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0146e-01 7.9277e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00791260 8.3985e-01 lowCoverage 1.0000e+00 lowCoverage 0.924198 0.945230 -0.02249496 6 0.909239 0.9574671 -0.04822799 9.7769e-01 6.5053e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9771e-01 2.3080e-02 weaklyHypometh 1.0000e+00 0.88159562 insignificant -0.05226025 2.9880e-03 lowCoverage 1.3582e-01 lowCoverage 0.919595 0.9437037 -0.0239936 6 0.920193 0.9436800 -0.0234875 9.5689e-01 1.4499e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6686e-01 1.5924e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0104948 7.8924e-01 insignificant 1.0000e+00 insignificant 0.919643 0.945230 -0.02720143 6 0.931594 0.9574671 -0.02587350 9.9606e-01 8.1241e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9861e-01 7.4791e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0338529 4.6637e-02 weaklyHypometh 0.97159487 insignificant 0.9437037 0.945133 -0.00582100 6 0.9436800 0.9503782 -0.00669827 8.2673e-01 6.0334e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.72484955 4.3222e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04434765 2.7140e-01 insignificant 1.0000e+00 insignificant chr19 53391186 53392186 150838 C19orf68 ENSG00000185453 0.890340 443 9 0.640822 401 9 0.790232 361 9 0.9212566 414 9 0.809732 176 9 0.8657880 558 9 0.737847 267 9 0.8691609 348 9 0.663489 294 9 0.903086 361 9 0.813329 370 9 0.679524 224 8 0.8637445 376 9 0.869371 140 4 0.8082697 369 9 0.821831 166 8 0.687404 553 7 0.7603879 435 9 0.7915687 316 9 0.813107 390 9 0.835603 90 8 0.7930859 156 9 0.834207 308 9 0.724143 123 9 0.8178111 126 8 0.819298 453 9 0.739065 257 10 0.775076 139 5 0.691449 316 9 0.936713 506 9 0.828116 473 9 0.8839495 548 9 0.5664713 408 9 0.7102416 243 9 0.6850182 341 9 0.3572528 138 9 0.421085 227 10 0.7847306 480 9 0.9093727 458 9 0.915980 425 9 0.8773966 437 9 0.833379 399 9 0.7956125 503 9 0.8920077 0.733216 0.775219 0.911954 0.870724 0.8866303 0.864450 0.845528 0.837257 0.9002282 0.903178 0.7851788 0.835401 0.889759 0.874985 0.8950433 0.871973 0.8575782 0.8469103 0.909337 0.904202 0.8179868 0.911432 0.894151 0.902060 0.880133 0.831008 0.871716 0.8150506 0.913750 0.922778 0.8736736 0.5408989 0.6632606 0.6344909 0.3207508 0.411538 0.8335929 0.907211 0.883844 0.8779596 0.889797 0.8842220 8 0.876903 0.893276 -0.02146971 9 0.732898 0.743565 -0.0106675 0.9696355 1.2584e-01 insignificant 1 1.000000 insignificant 0.9959168 1.0932e-01 insignificant 1 1.000000 insignificant -6.5286e-03 0.810508 insignificant 1 insignificant 0.877085 0.6510615 0.2287460 9 0.756982 0.6372495 0.1197320 1.6675e-14 9.9949e-01 hypermethylated 2.7336e-13 1.0000e+00 hypermethylated 3.0384e-06 9.9887e-01 hypermethylated 4.9007e-05 1.0000e+00 hypermethylated 0.21254794 2.6800e-02 weaklyHypermeth 2.1440e-01 insignificant 0.877085 0.909091 -0.02293046 9 0.756982 0.8571961 -0.10021458 9.9796e-01 2.0789e-02 weaklyHypometh 1.0000e+00 6.9295e-01 insignificant 9.9857e-01 8.5131e-03 weaklyHypometh 1.0000e+00 0.60807771 insignificant -0.06633365 4.7984e-02 weaklyHypometh 7.6164e-01 insignificant 0.893709 0.6510615 0.2302616 9 0.733649 0.6372495 0.0963999 5.7825e-12 1.0000e+00 hypermethylated 9.4794e-11 1.0000e+00 hypermethylated 2.5503e-06 9.9997e-01 hypermethylated 5.0005e-05 1.00000000 hypermethylated 0.2190765 2.3831e-02 weaklyHypermeth 1.9695e-01 insignificant 0.893709 0.909091 -0.00458527 9 0.733649 0.8571961 -0.12354672 6.6784e-01 1.6833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1605e-01 3.4892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0598051 7.5810e-02 insignificant 1.00000000 insignificant 0.6510615 0.909091 -0.25364729 9 0.6372495 0.8571961 -0.21994661 1.0000e+00 1.7314e-06 hypomethylated 1.0000000 2.9851e-05 hypomethylated 0.99999996 1.0299e-04 hypomethylated 1.00000 2.2886e-03 hypomethylated -0.27888160 8.6569e-03 weaklyHypometh 1.1222e-01 insignificant chr19 53391347 53392347 150839 C19orf68 ENSG00000185453 0.890340 443 9 0.640822 401 9 0.790232 361 9 0.9212566 414 9 0.809732 176 9 0.8657880 558 9 0.737847 267 9 0.8691609 348 9 0.663489 294 9 0.903086 361 9 0.813329 370 9 0.679524 224 8 0.8637445 376 9 0.869371 140 4 0.8082697 369 9 0.821831 166 8 0.687404 553 7 0.7603879 435 9 0.7915687 316 9 0.813107 390 9 0.835603 90 8 0.7930859 156 9 0.834207 308 9 0.724143 123 9 0.8178111 126 8 0.819298 453 9 0.739065 257 10 0.775076 139 5 0.691449 316 9 0.936713 506 9 0.828116 473 9 0.8839495 548 9 0.5664713 408 9 0.7102416 243 9 0.6850182 341 9 0.3572528 138 9 0.421085 227 10 0.7847306 480 9 0.9093727 458 9 0.915980 425 9 0.8773966 437 9 0.833379 399 9 0.7956125 503 9 0.8920077 0.733216 0.775219 0.911954 0.870724 0.8866303 0.864450 0.845528 0.837257 0.9002282 0.903178 0.7851788 0.835401 0.889759 0.874985 0.8950433 0.871973 0.8575782 0.8469103 0.909337 0.904202 0.8179868 0.911432 0.894151 0.902060 0.880133 0.831008 0.871716 0.8150506 0.913750 0.922778 0.8736736 0.5408989 0.6632606 0.6344909 0.3207508 0.411538 0.8335929 0.907211 0.883844 0.8779596 0.889797 0.8842220 8 0.876903 0.893276 -0.02146971 9 0.732898 0.743565 -0.0106675 0.9696355 1.2584e-01 insignificant 1 1.000000 insignificant 0.9959168 1.0932e-01 insignificant 1 1.000000 insignificant -6.5286e-03 0.810508 insignificant 1 insignificant 0.877085 0.6510615 0.2287460 9 0.756982 0.6372495 0.1197320 1.6675e-14 9.9949e-01 hypermethylated 2.7336e-13 1.0000e+00 hypermethylated 3.0384e-06 9.9887e-01 hypermethylated 4.9007e-05 1.0000e+00 hypermethylated 0.21254794 2.6800e-02 weaklyHypermeth 2.1440e-01 insignificant 0.877085 0.909091 -0.02293046 9 0.756982 0.8571961 -0.10021458 9.9796e-01 2.0789e-02 weaklyHypometh 1.0000e+00 6.9295e-01 insignificant 9.9857e-01 8.5131e-03 weaklyHypometh 1.0000e+00 0.60807771 insignificant -0.06633365 4.7984e-02 weaklyHypometh 7.6164e-01 insignificant 0.893709 0.6510615 0.2302616 9 0.733649 0.6372495 0.0963999 5.7825e-12 1.0000e+00 hypermethylated 9.4794e-11 1.0000e+00 hypermethylated 2.5503e-06 9.9997e-01 hypermethylated 5.0005e-05 1.00000000 hypermethylated 0.2190765 2.3831e-02 weaklyHypermeth 1.9695e-01 insignificant 0.893709 0.909091 -0.00458527 9 0.733649 0.8571961 -0.12354672 6.6784e-01 1.6833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1605e-01 3.4892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0598051 7.5810e-02 insignificant 1.00000000 insignificant 0.6510615 0.909091 -0.25364729 9 0.6372495 0.8571961 -0.21994661 1.0000e+00 1.7314e-06 hypomethylated 1.0000000 2.9851e-05 hypomethylated 0.99999996 1.0299e-04 hypomethylated 1.00000 2.2886e-03 hypomethylated -0.27888160 8.6569e-03 weaklyHypometh 1.1222e-01 insignificant chr19 54224821 54225821 150844 ENSG00000203338 0.793744 213 9 0.733447 431 14 0.753731 597 14 0.9204368 234 13 0.894456 349 15 0.8737541 676 12 0.780586 467 15 0.8713898 400 14 0.804036 390 14 0.898565 551 14 0.866353 617 15 0.802242 313 14 0.5773744 554 14 0.938388 113 5 0.7828281 527 14 0.757365 310 12 0.782433 181 10 0.5346756 201 13 0.7405317 549 14 0.818601 585 11 0.830590 249 15 0.7970522 148 10 0.863325 271 14 0.790633 186 14 0.7373538 114 7 0.817869 530 15 0.790962 265 14 0.899931 150 11 0.758027 512 14 0.787977 629 15 0.813702 597 14 0.8228381 730 15 0.4255551 526 15 0.6102024 484 14 0.5086414 588 13 0.3055492 126 11 0.685395 304 15 0.3121914 541 15 0.7634006 217 10 0.912176 402 15 0.8835262 190 14 0.831626 243 11 0.8428742 184 10 0.8726488 0.728617 0.751391 0.886522 0.917728 0.8629427 0.769285 0.852424 0.813623 0.8934388 0.879797 0.8071306 0.639806 0.844665 0.790845 0.8396981 0.826217 0.6342051 0.7566758 0.809161 0.835766 0.8222955 0.867360 0.789913 0.790203 0.824477 0.768227 0.889773 0.8428535 0.803677 0.824244 0.9024384 0.5216022 0.6116464 0.6132351 0.4145565 0.650687 0.3777812 0.886963 0.916659 0.8941397 0.844531 0.8309722 8 0.786994 0.827397 -0.03243745 14 0.816541 0.782437 0.0341040 0.9996625 1.4204e-02 weaklyHypometh 1 0.568165 insignificant 0.9687271 1.3178e-01 insignificant 1 1.000000 insignificant -1.2941e-02 0.625025 insignificant 1 insignificant 0.786969 0.4820872 0.3013627 14 0.805075 0.5337330 0.2713422 1.4279e-38 1.0000e+00 hypermethylated 8.9243e-37 1.0000e+00 hypermethylated 3.7439e-19 1.0000e+00 hypermethylated 1.2480e-16 1.0000e+00 hypermethylated 0.32165777 2.6814e-03 weaklyHypermeth 3.5282e-02 weaklyHypermeth 0.786943 0.890777 -0.08985119 13 0.792080 0.8803261 -0.08824595 9.9999e-01 8.5873e-08 weaklyHypometh 1.0000e+00 4.2937e-05 weaklyHypometh 9.9970e-01 4.7633e-05 weaklyHypometh 1.0000e+00 0.02381641 weaklyHypometh -0.05047360 1.6630e-01 insignificant 1.0000e+00 insignificant 0.827397 0.4818996 0.3280459 14 0.782437 0.5023369 0.2801004 9.5510e-35 1.0000e+00 hypermethylated 6.4036e-33 1.0000e+00 hypermethylated 1.3907e-16 1.0000e+00 hypermethylated 4.6357e-14 1.00000000 hypermethylated 0.3345992 2.8684e-03 weaklyHypermeth 3.8245e-02 weaklyHypermeth 0.827547 0.890777 -0.05077181 13 0.820096 0.8803261 -0.06023047 9.9763e-01 1.2957e-04 weaklyHypometh 1.0000e+00 2.5915e-02 weaklyHypometh 9.9383e-01 4.3729e-03 weaklyHypometh 1.0000e+00 3.1235e-01 insignificant -0.0375322 2.3209e-01 insignificant 1.00000000 insignificant 0.4818855 0.890777 -0.34839193 13 0.5026485 0.8803261 -0.37767759 1.0000e+00 2.8808e-22 hypomethylated 1.0000000 3.2009e-20 hypomethylated 1.00000000 7.2832e-12 hypomethylated 1.00000 1.8208e-09 hypomethylated -0.37213137 1.2353e-03 weaklyHypometh 3.8604e-02 weaklyHypometh chr19 54237017 54238017 150846 NTF6B ENSG00000212844 0.831284 427 12 0.656275 389 12 0.675267 376 12 0.8254344 405 11 0.823391 467 13 0.8406136 640 13 0.780604 432 12 0.7735377 387 13 0.764773 399 12 0.845359 501 12 0.845383 483 13 0.718403 282 12 0.5601938 634 12 0.800618 334 9 0.7279311 583 12 0.701758 229 12 0.637348 139 8 0.5907636 580 11 0.6949622 476 12 0.791498 449 12 0.948224 190 11 0.8106668 206 9 0.824621 467 12 0.821620 209 13 0.7274217 256 11 0.780430 470 13 0.736415 273 12 0.735858 199 11 0.788784 452 12 0.764417 545 13 0.634722 501 13 0.8194438 672 13 0.5047636 481 13 0.5879155 379 12 0.6375858 429 13 0.3645276 86 8 0.656196 295 13 0.3016983 512 13 0.8189076 493 12 0.824683 486 12 0.8253620 350 11 0.841426 514 12 0.8012556 306 13 0.8009151 0.634184 0.693451 0.793682 0.764831 0.8103439 0.745643 0.740236 0.715056 0.8143874 0.828348 0.6998220 0.512853 0.776853 0.672850 0.7136437 0.668241 0.5648318 0.6339860 0.762425 0.965250 0.7924295 0.822095 0.887158 0.724254 0.715233 0.673832 0.688455 0.7790950 0.685405 0.680334 0.8096773 0.5056226 0.5405699 0.5747783 0.3790379 0.642995 0.2156977 0.827442 0.759809 0.8295174 0.797512 0.7839479 11 0.727938 0.779905 -0.04871826 12 0.751589 0.791228 -0.0396393 0.9690215 1.3052e-02 weaklyHypometh 1 0.543847 insignificant 0.9834576 3.1535e-02 weaklyHypometh 1 1.000000 insignificant -3.8449e-02 0.199750 insignificant 1 insignificant 0.727811 0.5126089 0.2274878 12 0.718467 0.5071138 0.2113534 1.5377e-24 1.0000e+00 hypermethylated 5.3024e-23 1.0000e+00 hypermethylated 1.0708e-13 9.9941e-01 hypermethylated 7.7956e-12 1.0000e+00 hypermethylated 0.23548872 9.4933e-03 weaklyHypermeth 8.9559e-02 weaklyHypermeth 0.727928 0.806422 -0.08645877 12 0.769786 0.8342948 -0.06450862 9.9999e-01 1.6139e-04 weaklyHypometh 1.0000e+00 2.6899e-02 weaklyHypometh 9.9992e-01 1.1219e-03 weaklyHypometh 1.0000e+00 0.16903729 insignificant -0.07805694 9.7971e-04 weaklyHypometh 7.3327e-02 weaklyHypometh 0.779757 0.5128323 0.2685878 12 0.778180 0.5379192 0.2402605 1.3584e-22 1.0000e+00 hypermethylated 4.8516e-21 1.0000e+00 hypermethylated 4.3030e-13 9.9999e-01 hypermethylated 4.7811e-11 1.00000000 hypermethylated 0.2739376 4.5399e-03 weaklyHypermeth 5.2790e-02 weaklyHypermeth 0.780135 0.806422 -0.03756538 12 0.798872 0.8342948 -0.03542284 9.9908e-01 7.3017e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9097e-01 2.2778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0396081 1.0496e-01 insignificant 1.00000000 insignificant 0.5126205 0.806331 -0.31927611 12 0.5082082 0.8215483 -0.31334008 1.0000e+00 1.8291e-14 hypomethylated 1.0000000 9.1456e-13 hypomethylated 0.99999974 4.3446e-11 hypomethylated 1.00000 7.2409e-09 hypomethylated -0.31354566 3.2743e-03 weaklyHypometh 6.6823e-02 weaklyHypometh chr19 54237208 54238208 150847 NTF6B ENSG00000212844 0.831284 427 12 0.656275 389 12 0.675267 376 12 0.8254344 405 11 0.823391 467 13 0.8406136 640 13 0.780604 432 12 0.7735377 387 13 0.764773 399 12 0.845359 501 12 0.845383 483 13 0.718403 282 12 0.5601938 634 12 0.800618 334 9 0.7279311 583 12 0.701758 229 12 0.637348 139 8 0.5907636 580 11 0.6949622 476 12 0.791498 449 12 0.948224 190 11 0.8106668 206 9 0.824621 467 12 0.821620 209 13 0.7274217 256 11 0.780430 470 13 0.736415 273 12 0.735858 199 11 0.788784 452 12 0.764417 545 13 0.634722 501 13 0.8194438 672 13 0.5047636 481 13 0.5879155 379 12 0.6375858 429 13 0.3645276 86 8 0.656196 295 13 0.3016983 512 13 0.8189076 493 12 0.824683 486 12 0.8253620 350 11 0.841426 514 12 0.8012556 306 13 0.8009151 0.634184 0.693451 0.793682 0.764831 0.8103439 0.745643 0.740236 0.715056 0.8143874 0.828348 0.6998220 0.512853 0.776853 0.672850 0.7136437 0.668241 0.5648318 0.6339860 0.762425 0.965250 0.7924295 0.822095 0.887158 0.724254 0.715233 0.673832 0.688455 0.7790950 0.685405 0.680334 0.8096773 0.5056226 0.5405699 0.5747783 0.3790379 0.642995 0.2156977 0.827442 0.759809 0.8295174 0.797512 0.7839479 11 0.727938 0.779905 -0.04871826 12 0.751589 0.791228 -0.0396393 0.9690215 1.3052e-02 weaklyHypometh 1 0.543847 insignificant 0.9834576 3.1535e-02 weaklyHypometh 1 1.000000 insignificant -3.8449e-02 0.199750 insignificant 1 insignificant 0.727811 0.5126089 0.2274878 12 0.718467 0.5071138 0.2113534 1.5377e-24 1.0000e+00 hypermethylated 5.3024e-23 1.0000e+00 hypermethylated 1.0708e-13 9.9941e-01 hypermethylated 7.7956e-12 1.0000e+00 hypermethylated 0.23548872 9.4933e-03 weaklyHypermeth 8.9559e-02 weaklyHypermeth 0.727928 0.806422 -0.08645877 12 0.769786 0.8342948 -0.06450862 9.9999e-01 1.6139e-04 weaklyHypometh 1.0000e+00 2.6899e-02 weaklyHypometh 9.9992e-01 1.1219e-03 weaklyHypometh 1.0000e+00 0.16903729 insignificant -0.07805694 9.7971e-04 weaklyHypometh 7.3327e-02 weaklyHypometh 0.779757 0.5128323 0.2685878 12 0.778180 0.5379192 0.2402605 1.3584e-22 1.0000e+00 hypermethylated 4.8516e-21 1.0000e+00 hypermethylated 4.3030e-13 9.9999e-01 hypermethylated 4.7811e-11 1.00000000 hypermethylated 0.2739376 4.5399e-03 weaklyHypermeth 5.2790e-02 weaklyHypermeth 0.780135 0.806422 -0.03756538 12 0.798872 0.8342948 -0.03542284 9.9908e-01 7.3017e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9097e-01 2.2778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0396081 1.0496e-01 insignificant 1.00000000 insignificant 0.5126205 0.806331 -0.31927611 12 0.5082082 0.8215483 -0.31334008 1.0000e+00 1.8291e-14 hypomethylated 1.0000000 9.1456e-13 hypomethylated 0.99999974 4.3446e-11 hypomethylated 1.00000 7.2409e-09 hypomethylated -0.31354566 3.2743e-03 weaklyHypometh 6.6823e-02 weaklyHypometh chr19 54401600 54402600 150849 TRPM4 ENSG00000130529 0.775763 234 7 0.722758 189 7 0.726864 115 7 0.5424242 179 7 0.624054 59 7 0.6948432 307 7 0.507711 94 7 0.7155014 122 7 0.647487 93 7 0.722321 79 7 0.729377 244 7 0.647043 70 7 0.7004247 136 7 0.683036 29 4 0.8210100 117 4 0.465986 47 4 0.708333 47 2 0.6661657 181 7 0.6749743 196 7 0.688293 242 7 0.722222 42 2 0.7087363 96 7 0.806360 141 7 0.805836 71 7 0.8636570 61 7 0.765214 235 7 0.729033 90 7 0.734217 40 3 0.765204 121 7 0.635095 206 7 0.699042 214 7 0.6223607 404 7 0.6658676 127 7 0.6761327 95 7 0.7445831 197 7 0.5714286 63 4 0.671645 100 7 0.6368882 186 7 0.6207585 157 7 0.803167 228 7 0.6308698 150 7 0.785015 185 7 0.6345090 204 7 0.8062628 0.794298 0.692829 0.810947 0.783624 0.8177089 0.675486 0.778507 0.793517 0.7669884 0.804875 0.6674917 0.750316 0.771291 0.816419 0.6446375 0.869369 0.8335718 0.7601012 0.790385 0.793293 0.7929768 0.823982 0.816580 0.860828 0.796592 0.752632 0.773979 0.7484000 0.814900 0.771771 0.7904338 0.7081800 0.7571331 0.7751928 0.6666667 0.740161 0.7070141 0.818569 0.843364 0.8031017 0.822715 0.8061494 4 0.785971 0.788495 -0.01252039 7 0.665025 0.702114 -0.0370882 0.9347606 2.1721e-01 insignificant 1 1.000000 insignificant 0.9891816 5.2368e-02 insignificant 1 1.000000 insignificant -6.4863e-02 0.026971 weaklyHypometh 1 insignificant 0.786850 0.7369792 0.0442194 7 0.674102 0.6837953 -0.0096930 1.0165e-02 7.9458e-01 weaklyHypermeth 5.4649e-02 1.0000e+00 weaklyHypermeth 1.2366e-01 6.8401e-01 insignificant 5.9454e-01 1.0000e+00 insignificant 0.01212769 6.9242e-01 insignificant 1.0000e+00 insignificant 0.785971 0.820346 -0.03212926 7 0.665025 0.6427683 0.02225701 3.1244e-01 2.0124e-02 weaklyHypometh 1.0000e+00 6.9295e-01 insignificant 4.7633e-01 1.6044e-02 weaklyHypometh 1.0000e+00 0.76400519 insignificant -0.02164530 6.4744e-01 insignificant 1.0000e+00 insignificant 0.789597 0.7369792 0.0563672 7 0.713459 0.6837953 0.0296642 6.8625e-03 9.7237e-01 weaklyHypermeth 3.9667e-02 1.0000e+00 weaklyHypermeth 1.0140e-02 9.6994e-01 weaklyHypermeth 7.5109e-02 1.00000000 weaklyHypermeth 0.0769906 2.6668e-02 weaklyHypermeth 2.1507e-01 insignificant 0.788495 0.820346 -0.02079443 7 0.702114 0.6427683 0.05934518 3.8051e-01 5.4465e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9255e-01 2.4602e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0432176 3.7717e-01 insignificant 1.00000000 insignificant 0.7369792 0.823913 -0.07946928 7 0.6837953 0.7141870 -0.03039177 9.8758e-01 3.9081e-03 weaklyHypometh 1.0000000 3.0532e-02 weaklyHypometh 0.99282223 8.7650e-03 weaklyHypometh 1.00000 8.6782e-02 weaklyHypometh -0.03377299 4.9544e-01 insignificant 1.0000e+00 insignificant chr19 55270024 55271024 150858 ENSG00000213861 0.844345 110 8 0.688088 104 10 0.725244 138 10 0.7517406 119 7 0.586893 87 4 0.6954165 137 10 0.758807 121 5 0.8517257 148 8 0.691399 130 8 0.820251 104 9 0.854291 231 10 0.700924 78 7 0.7859030 255 10 0.789015 65 4 0.7881313 112 8 0.618632 85 3 0.665441 42 3 0.7568091 128 10 0.7139578 149 10 0.642677 123 10 0.724615 62 5 0.6830245 92 8 0.627094 63 5 0.713158 76 8 0.7816919 55 6 0.883970 241 12 0.780084 139 10 0.609259 60 4 0.810271 106 8 0.800385 280 12 0.883634 288 10 0.8302006 173 10 0.5006019 130 10 0.5038492 130 8 0.4375000 37 3 0.5388889 40 5 0.647488 83 9 0.6790287 167 11 0.6982601 49 2 0.904817 97 7 0.7273810 60 5 0.866667 37 1 0.7045455 42 1 0.8183734 0.739448 0.796629 0.779290 0.658692 0.8135225 0.793225 0.862041 0.721334 0.8439009 0.844221 0.7396073 0.758374 0.763539 0.810521 0.8243373 0.792102 0.6909735 0.7447545 0.798445 0.768414 0.6609056 0.717074 0.821146 0.830969 0.858824 0.811192 0.691829 0.8198013 0.762399 0.848875 0.8089322 0.4328946 0.4589303 0.4650979 0.4188791 0.664751 0.6259051 0.749514 0.884455 0.8227981 0.834808 0.7975999 2 0.779805 0.799878 -0.02757646 10 0.698921 0.814428 -0.1155067 0.9920048 1.1648e-01 insignificant 1 1.000000 insignificant 0.8966258 1.6270e-01 insignificant 1 1.000000 insignificant -2.4131e-02 0.450027 insignificant 1 insignificant 0.780122 0.5400341 0.2383539 9 0.752684 0.6142113 0.1384730 1.6470e-15 9.8732e-01 hypermethylated 2.8895e-14 1.0000e+00 hypermethylated 2.3981e-05 9.7599e-01 hypermethylated 3.2407e-04 1.0000e+00 hypermethylated 0.18525858 2.8528e-03 weaklyHypermeth 3.6575e-02 weaklyHypermeth 0.780122 0.782456 -0.02706381 3 0.752684 0.8141546 -0.06147037 6.9438e-01 1.7277e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6819e-01 1.7191e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.04384944 3.9124e-01 lowCoverage 1.0000e+00 lowCoverage 0.799755 0.5400341 0.2648744 9 0.800153 0.6142113 0.1859417 9.3102e-12 9.9984e-01 hypermethylated 1.4323e-10 1.0000e+00 hypermethylated 8.8770e-05 9.9943e-01 hypermethylated 1.1680e-03 1.00000000 hypermethylated 0.2093897 1.1330e-03 weaklyHypermeth 1.8574e-02 weaklyHypermeth 0.799755 0.782456 -0.00510811 3 0.800153 0.8141546 -0.01400162 2.1597e-01 3.5186e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8532e-01 1.9638e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0197183 7.1018e-01 lowCoverage 1.00000000 lowCoverage 0.5400341 0.782456 -0.26672052 3 0.6142113 0.8141546 -0.19994333 9.9996e-01 1.5267e-05 lowCoverage 1.0000000 2.0088e-04 lowCoverage 0.99999658 4.5818e-04 lowCoverage 1.00000 7.8996e-03 lowCoverage -0.22910802 3.7726e-03 lowCoverage 7.1182e-02 lowCoverage chr19 55270245 55271245 150859 ENSG00000213861 0.844345 110 8 0.688088 104 10 0.725244 138 10 0.7517406 119 7 0.586893 87 4 0.6954165 137 10 0.758807 121 5 0.8517257 148 8 0.691399 130 8 0.820251 104 9 0.854291 231 10 0.700924 78 7 0.7859030 255 10 0.789015 65 4 0.7881313 112 8 0.618632 85 3 0.665441 42 3 0.7568091 128 10 0.7139578 149 10 0.642677 123 10 0.724615 62 5 0.6830245 92 8 0.627094 63 5 0.713158 76 8 0.7816919 55 6 0.883970 241 12 0.780084 139 10 0.609259 60 4 0.810271 106 8 0.800385 280 12 0.883634 288 10 0.8302006 173 10 0.5006019 130 10 0.5038492 130 8 0.4375000 37 3 0.5388889 40 5 0.647488 83 9 0.6790287 167 11 0.6982601 49 2 0.904817 97 7 0.7273810 60 5 0.866667 37 1 0.7045455 42 1 0.8183734 0.739448 0.796629 0.779290 0.658692 0.8135225 0.793225 0.862041 0.721334 0.8439009 0.844221 0.7396073 0.758374 0.763539 0.810521 0.8243373 0.792102 0.6909735 0.7447545 0.798445 0.768414 0.6609056 0.717074 0.821146 0.830969 0.858824 0.811192 0.691829 0.8198013 0.762399 0.848875 0.8089322 0.4328946 0.4589303 0.4650979 0.4188791 0.664751 0.6259051 0.749514 0.884455 0.8227981 0.834808 0.7975999 2 0.779805 0.799878 -0.02757646 10 0.698921 0.814428 -0.1155067 0.9920048 1.1648e-01 insignificant 1 1.000000 insignificant 0.8966258 1.6270e-01 insignificant 1 1.000000 insignificant -2.4131e-02 0.450027 insignificant 1 insignificant 0.780122 0.5400341 0.2383539 9 0.752684 0.6142113 0.1384730 1.6470e-15 9.8732e-01 hypermethylated 2.8895e-14 1.0000e+00 hypermethylated 2.3981e-05 9.7599e-01 hypermethylated 3.2407e-04 1.0000e+00 hypermethylated 0.18525858 2.8528e-03 weaklyHypermeth 3.6575e-02 weaklyHypermeth 0.780122 0.782456 -0.02706381 3 0.752684 0.8141546 -0.06147037 6.9438e-01 1.7277e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6819e-01 1.7191e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.04384944 3.9124e-01 lowCoverage 1.0000e+00 lowCoverage 0.799755 0.5400341 0.2648744 9 0.800153 0.6142113 0.1859417 9.3102e-12 9.9984e-01 hypermethylated 1.4323e-10 1.0000e+00 hypermethylated 8.8770e-05 9.9943e-01 hypermethylated 1.1680e-03 1.00000000 hypermethylated 0.2093897 1.1330e-03 weaklyHypermeth 1.8574e-02 weaklyHypermeth 0.799755 0.782456 -0.00510811 3 0.800153 0.8141546 -0.01400162 2.1597e-01 3.5186e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8532e-01 1.9638e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0197183 7.1018e-01 lowCoverage 1.00000000 lowCoverage 0.5400341 0.782456 -0.26672052 3 0.6142113 0.8141546 -0.19994333 9.9996e-01 1.5267e-05 lowCoverage 1.0000000 2.0088e-04 lowCoverage 0.99999658 4.5818e-04 lowCoverage 1.00000 7.8996e-03 lowCoverage -0.22910802 3.7726e-03 lowCoverage 7.1182e-02 lowCoverage chr19 55506583 55507583 150860 MYH14 ENSG00000105357 0.182277 393 8 0.014527 273 8 0.000000 317 8 0.0099484 552 8 0.000000 127 8 0.0019841 449 8 0.000000 400 8 0.0082341 306 8 0.170516 190 8 0.006250 333 8 0.030046 220 8 0.008699 276 8 0.0040323 290 8 NA 0 0 0.1649288 289 8 0.005814 241 8 0.018229 373 8 0.0047468 529 8 0.0084965 236 8 0.771538 222 8 0.012500 85 5 0.1281378 331 8 0.022104 268 8 0.011905 113 8 0.0000000 206 8 0.000000 373 8 0.029840 152 8 0.013889 86 7 0.002907 254 8 0.343581 293 8 0.000000 360 8 0.0015823 480 8 0.0116633 173 8 0.0000000 214 8 0.0000000 78 8 0.0000000 95 8 0.000000 84 5 0.0137334 319 8 0.0099277 444 8 0.092481 519 8 0.0458523 387 8 0.305801 517 8 0.0044657 563 8 0.1843927 0.012956 0.000000 0.011473 0.000000 0.0022197 0.000000 0.009974 0.165777 0.0080475 0.031503 0.0075602 0.004511 NA 0.169721 0.0050316 0.021658 0.0045089 0.0077788 0.765442 0.013984 0.0170124 0.025726 0.015329 0.000000 0.000000 0.031310 0.013486 0.0027612 0.335271 0.000000 0.0015364 0.0119456 0.0000000 0.0000000 0.0000000 0.000000 0.0136600 0.008811 0.085660 0.0510662 0.307503 0.0052223 8 0.060339 0.041667 0.01855574 8 0.059982 0.041100 0.0188822 0.4123648 9.6757e-01 insignificant 1 1.000000 insignificant 0.0761986 9.9876e-01 insignificant 1 1.000000 insignificant 2.7021e-02 0.595420 insignificant 1 insignificant 0.060339 0.0072690 0.0530375 8 0.059982 0.0067926 0.0531897 7.0233e-02 9.9907e-01 insignificant 3.2973e-01 1.0000e+00 insignificant 9.5039e-04 9.9999e-01 weaklyHypermeth 8.3367e-03 1.0000e+00 weaklyHypermeth 0.06999176 1.0752e-01 insignificant 6.3250e-01 insignificant 0.060339 0.099588 -0.04030715 8 0.059982 0.0942989 -0.03431654 9.6978e-01 3.1244e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9980e-01 2.5524e-02 weaklyHypometh 1.0000e+00 0.88159562 insignificant -0.01748102 8.0675e-01 insignificant 1.0000e+00 insignificant 0.041667 0.0072690 0.0352834 8 0.041100 0.0067926 0.0343075 8.3075e-02 9.9847e-01 insignificant 3.9002e-01 1.0000e+00 insignificant 6.9148e-02 9.9384e-01 insignificant 3.8630e-01 1.00000000 insignificant 0.0429709 1.6522e-01 insignificant 8.9310e-01 insignificant 0.041667 0.099588 -0.05505545 8 0.041100 0.0942989 -0.05319875 9.9819e-01 6.0129e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 2.0701e-04 weaklyHypometh 1.0000e+00 6.9002e-02 weaklyHypometh -0.0445018 5.0401e-01 insignificant 1.00000000 insignificant 0.0072690 0.099588 -0.09257558 8 0.0067926 0.0942989 -0.08750628 1.0000e+00 4.6250e-04 weaklyHypometh 1.0000000 4.6250e-03 weaklyHypometh 1.00000000 3.3731e-06 weaklyHypometh 1.00000 1.5019e-04 weaklyHypometh -0.08747278 1.9203e-01 insignificant 1.0000e+00 insignificant chr19 55506742 55507742 150861 MYH14 ENSG00000105357 0.182277 393 8 0.014527 273 8 0.000000 317 8 0.0099484 552 8 0.000000 127 8 0.0019841 449 8 0.000000 400 8 0.0082341 306 8 0.170516 190 8 0.006250 333 8 0.030046 220 8 0.008699 276 8 0.0040323 290 8 NA 0 0 0.1649288 289 8 0.005814 241 8 0.018229 373 8 0.0047468 529 8 0.0084965 236 8 0.771538 222 8 0.012500 85 5 0.1281378 331 8 0.022104 268 8 0.011905 113 8 0.0000000 206 8 0.000000 373 8 0.029840 152 8 0.013889 86 7 0.002907 254 8 0.343581 293 8 0.000000 360 8 0.0015823 480 8 0.0116633 173 8 0.0000000 214 8 0.0000000 78 8 0.0000000 95 8 0.000000 84 5 0.0137334 319 8 0.0099277 444 8 0.092481 519 8 0.0458523 387 8 0.305801 517 8 0.0044657 563 8 0.1843927 0.012956 0.000000 0.011473 0.000000 0.0022197 0.000000 0.009974 0.165777 0.0080475 0.031503 0.0075602 0.004511 NA 0.169721 0.0050316 0.021658 0.0045089 0.0077788 0.765442 0.013984 0.0170124 0.025726 0.015329 0.000000 0.000000 0.031310 0.013486 0.0027612 0.335271 0.000000 0.0015364 0.0119456 0.0000000 0.0000000 0.0000000 0.000000 0.0136600 0.008811 0.085660 0.0510662 0.307503 0.0052223 8 0.060339 0.041667 0.01855574 8 0.059982 0.041100 0.0188822 0.4123648 9.6757e-01 insignificant 1 1.000000 insignificant 0.0761986 9.9876e-01 insignificant 1 1.000000 insignificant 2.7021e-02 0.595420 insignificant 1 insignificant 0.060339 0.0072690 0.0530375 8 0.059982 0.0067926 0.0531897 7.0233e-02 9.9907e-01 insignificant 3.2973e-01 1.0000e+00 insignificant 9.5039e-04 9.9999e-01 weaklyHypermeth 8.3367e-03 1.0000e+00 weaklyHypermeth 0.06999176 1.0752e-01 insignificant 6.3250e-01 insignificant 0.060339 0.099588 -0.04030715 8 0.059982 0.0942989 -0.03431654 9.6978e-01 3.1244e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9980e-01 2.5524e-02 weaklyHypometh 1.0000e+00 0.88159562 insignificant -0.01748102 8.0675e-01 insignificant 1.0000e+00 insignificant 0.041667 0.0072690 0.0352834 8 0.041100 0.0067926 0.0343075 8.3075e-02 9.9847e-01 insignificant 3.9002e-01 1.0000e+00 insignificant 6.9148e-02 9.9384e-01 insignificant 3.8630e-01 1.00000000 insignificant 0.0429709 1.6522e-01 insignificant 8.9310e-01 insignificant 0.041667 0.099588 -0.05505545 8 0.041100 0.0942989 -0.05319875 9.9819e-01 6.0129e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 2.0701e-04 weaklyHypometh 1.0000e+00 6.9002e-02 weaklyHypometh -0.0445018 5.0401e-01 insignificant 1.00000000 insignificant 0.0072690 0.099588 -0.09257558 8 0.0067926 0.0942989 -0.08750628 1.0000e+00 4.6250e-04 weaklyHypometh 1.0000000 4.6250e-03 weaklyHypometh 1.00000000 3.3731e-06 weaklyHypometh 1.00000 1.5019e-04 weaklyHypometh -0.08747278 1.9203e-01 insignificant 1.0000e+00 insignificant chr19 55746613 55747613 150863 ASPDH ENSG00000204653 0.276335 128 4 0.154988 161 6 0.338700 200 6 0.1911111 96 3 0.210939 182 6 0.2681199 151 8 0.253676 267 6 0.1212766 155 6 0.391581 174 6 0.374709 194 6 0.313494 217 6 0.343587 178 6 0.1073067 232 6 0.680000 25 1 0.3447063 161 6 0.270577 137 6 0.245989 255 6 0.1054860 123 4 0.2273266 203 6 0.523626 98 7 0.314674 82 5 0.1712963 60 1 0.466498 111 6 0.207943 65 4 0.2138365 60 1 0.132986 195 6 0.210932 91 5 0.216745 80 5 0.173654 186 6 0.330821 167 5 0.083512 238 6 0.3394842 117 5 0.1193182 200 6 0.0758600 217 6 0.0000000 107 4 0.2000000 12 0 0.138095 66 5 0.1706929 171 5 0.2516088 117 5 0.259201 105 5 0.1322917 95 1 0.310980 113 2 0.1650641 60 3 0.5521978 0.133800 0.555246 0.401538 0.430958 0.4435146 0.514465 0.316762 0.486807 0.5078167 0.463588 0.5735607 0.328317 NA 0.622795 0.5865985 0.590314 0.4060694 0.4862048 0.701518 0.455473 0.4080586 0.414190 0.531097 0.427946 0.323439 0.416432 0.410469 0.3923242 0.489628 0.170869 0.5151526 0.3529283 0.2433496 0.4218313 0.5590659 0.462179 0.5217223 0.353542 0.420439 0.4203526 0.433804 0.3037475 1 0.326309 0.263267 0.05847918 6 0.416460 0.402776 0.0136849 0.0551049 8.8510e-01 insignificant 1 1.000000 insignificant 0.2168611 8.3510e-01 insignificant 1 1.000000 insignificant 4.8645e-02 0.275054 lowCoverage 1 lowCoverage 0.322188 0.1073739 0.1766609 6 0.229143 0.0944639 0.1346788 3.4900e-08 1.0000e+00 weaklyHypermeth 3.4900e-07 1.0000e+00 weaklyHypermeth 1.5514e-05 9.9993e-01 weaklyHypermeth 2.2485e-04 1.0000e+00 weaklyHypermeth 0.16984902 9.7917e-04 lowCoverage 1.6320e-02 lowCoverage 0.324714 0.536735 0.09143823 2 0.291495 0.2009229 0.09057197 9.3995e-04 9.9991e-01 lowCoverage 2.4735e-02 1.0000e+00 lowCoverage 4.3419e-03 9.9999e-01 lowCoverage 1.4006e-01 1.00000000 lowCoverage 0.06334748 1.8616e-01 lowCoverage 1.0000e+00 lowCoverage 0.259028 0.1075130 0.1172085 6 0.212959 0.1102078 0.1027515 1.4257e-05 9.9999e-01 weaklyHypermeth 1.2506e-04 1.0000e+00 weaklyHypermeth 7.3765e-05 9.8750e-01 weaklyHypermeth 9.9683e-04 1.00000000 weaklyHypermeth 0.1212040 1.2271e-02 lowCoverage 1.1576e-01 lowCoverage 0.261921 0.544513 0.01237239 2 0.364195 0.2678972 0.09629795 3.5716e-02 9.6411e-01 lowCoverage 5.4116e-01 1.0000e+00 lowCoverage 8.8482e-03 9.9740e-01 lowCoverage 2.5345e-01 1.0000e+00 lowCoverage 0.0147024 7.4887e-01 lowCoverage 1.00000000 lowCoverage 0.1075130 0.542918 -0.07405169 2 0.1102078 0.1726791 -0.06247124 8.3275e-01 1.5480e-02 lowCoverage 1.0000000 9.9229e-02 lowCoverage 0.42154014 4.1136e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.10650154 3.9498e-02 lowCoverage 3.4346e-01 lowCoverage chr19 55882023 55883023 150866 SYT3 ENSG00000213023 0.146612 220 9 0.156667 144 9 0.383107 210 9 0.1627960 205 9 0.145014 158 6 0.2842109 310 9 0.243568 159 9 0.1570590 181 9 0.365957 190 7 0.247000 217 9 0.283813 143 9 0.185122 218 9 0.2170024 200 9 0.438492 38 4 0.6177094 128 7 0.144447 105 4 0.328501 177 9 0.2221371 232 9 0.1472436 97 5 0.509302 230 9 0.395278 89 4 0.2709522 219 9 0.210025 155 9 0.109625 149 9 0.2132812 200 9 0.243111 221 9 0.166628 167 9 0.179625 109 4 0.221876 140 4 0.525815 176 9 0.195043 237 9 0.1958702 446 9 0.2026347 185 9 0.2241389 134 9 0.1666667 57 1 0.1349808 79 4 0.330525 94 8 0.4130111 147 6 0.2467997 267 9 0.257865 250 9 0.3661184 175 4 0.318522 245 9 0.2258811 321 9 0.2356142 0.250039 0.419052 0.250139 0.220585 0.3522988 0.371729 0.258578 0.414625 0.2824838 0.379339 0.3296411 0.241947 0.337243 0.658103 0.2498541 0.263344 0.2545676 0.2192263 0.650610 0.477817 0.2437008 0.280127 0.236820 0.275582 0.291140 0.240364 0.304061 0.2716739 0.454073 0.180948 0.2871583 0.1483246 0.4073511 0.0726200 0.2394519 0.277216 0.3273799 0.273807 0.202977 0.5207977 0.425329 0.3149283 4 0.324537 0.251300 0.05633864 9 0.264491 0.237321 0.0271700 0.0209609 9.8732e-01 weaklyHypermeth 1 1.000000 insignificant 0.2267734 7.3482e-01 insignificant 1 1.000000 insignificant 2.5361e-02 0.571198 insignificant 1 insignificant 0.324537 0.2485632 0.0789479 7 0.264491 0.2633121 0.0011793 7.0607e-03 1.8344e-01 weaklyHypermeth 3.8684e-02 1.0000e+00 weaklyHypermeth 3.4290e-03 6.1912e-01 weaklyHypermeth 2.6375e-02 1.0000e+00 weaklyHypermeth 0.02396187 6.5850e-01 insignificant 1.0000e+00 insignificant 0.324537 0.330684 0.00550330 9 0.264491 0.2801148 -0.01562345 3.5245e-01 4.8768e-02 inconclusive 1.0000e+00 9.7535e-01 insignificant 7.2138e-01 1.0027e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01374900 7.3359e-01 insignificant 1.0000e+00 insignificant 0.251300 0.2485632 0.0239236 7 0.237321 0.2633121 -0.0259906 2.9554e-02 7.2256e-03 weaklyHypermeth 1.5804e-01 7.2256e-01 insignificant 9.5585e-03 4.2620e-01 weaklyHypermeth 7.1868e-02 1.00000000 weaklyHypermeth -0.0013988 9.7981e-01 insignificant 1.0000e+00 insignificant 0.251300 0.330684 -0.05165464 9 0.237321 0.2801148 -0.04279340 8.9414e-01 2.4275e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.0161e-01 1.2647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0391096 3.6149e-01 insignificant 1.00000000 insignificant 0.2485632 0.330684 -0.06936925 7 0.2633121 0.2801148 -0.01680277 3.7101e-01 4.8995e-02 weaklyHypometh 1.0000000 2.7371e-01 insignificant 0.85370411 4.3131e-02 weaklyHypometh 1.00000 3.0162e-01 insignificant -0.03771087 4.7551e-01 insignificant 1.0000e+00 insignificant chr19 56548252 56549252 150869 VSIG10L ENSG00000186806 0.900000 27 3 0.555642 70 5 0.628316 92 6 0.8000000 8 0 NA 0 0 0.7380655 75 6 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.8433333 28 4 NA 0 0 0.915242 61 5 NA 0 0 NA 0 0 0.766942 100 6 NA 0 0 NA 0 0 0.849987 141 5 NA 0 0 NA 0 0 NA 0 0 0.851803 150 6 0.888643 140 5 0.7742105 68 5 0.7509683 155 6 NA 0 0 0.6490385 54 6 NA 0 0 NA 0 0 0.8067761 118 6 0.7587251 38 3 0.888889 5 0 0.8750000 5 0 0.863889 43 5 0.8109668 42 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.725762 0.843072 -0.11489520 0 0.714196 0.837700 -0.1235032 0.9992813 5.4891e-03 noCoverage 1 0.343070 noCoverage 0.9400761 2.9337e-01 noCoverage 1 1.000000 noCoverage -5.7660e-02 0.338137 lowCoverage 1 lowCoverage 0.725762 0.7798165 -0.0704223 0 0.714196 0.7516191 -0.0374228 8.7265e-01 2.1750e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 7.0374e-01 8.2647e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.03306272 6.4792e-01 lowCoverage 1.0000e+00 lowCoverage 0.725762 0.804511 -0.06338122 0 0.714196 0.7813728 -0.06717639 9.4167e-01 1.5114e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.2137e-01 3.2940e-01 noCoverage 1.0000e+00 1.00000000 noCoverage -0.07083692 2.4668e-01 lowCoverage 1.0000e+00 lowCoverage 0.843072 0.7798165 0.0402051 5 0.837700 0.7516191 0.0860805 1.7743e-02 9.7634e-01 weaklyHypermeth 9.8573e-02 1.0000e+00 weaklyHypermeth 8.8052e-02 9.6976e-01 insignificant 4.8116e-01 1.00000000 insignificant 0.0907229 1.7629e-01 lowCoverage 9.1741e-01 lowCoverage 0.843072 0.804511 0.03730691 3 0.837700 0.7813728 0.05632685 1.5020e-01 4.9059e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.0503e-01 1.1096e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0131767 7.0755e-01 lowCoverage 1.00000000 lowCoverage 0.7798165 0.804511 -0.01465964 3 0.7516191 0.7813728 -0.02975362 6.7038e-01 4.0442e-02 lowCoverage 1.0000000 2.3513e-01 lowCoverage 0.99026844 7.8387e-03 lowCoverage 1.00000 8.0812e-02 lowCoverage -0.10389964 1.3646e-01 lowCoverage 8.3875e-01 lowCoverage chr19 56885133 56886133 150871 ENSG00000210345 0.220260 261 9 0.288928 148 7 0.104741 220 8 0.1652116 148 6 0.143937 183 9 0.3902242 257 8 0.194670 248 8 0.1694272 204 8 0.122041 255 8 0.178451 277 8 0.196894 231 8 0.048104 248 8 0.2279372 184 8 0.331585 28 2 0.1203353 181 6 0.098951 229 7 0.045357 247 8 0.3186267 225 6 0.2667295 173 8 0.181723 211 8 0.236297 117 9 0.2229091 122 6 0.115060 207 8 0.139607 136 9 0.2470238 60 5 0.197057 249 8 0.208302 176 8 0.179959 137 9 0.258333 138 6 0.196432 236 9 0.183052 246 9 0.1463733 300 9 0.1481018 179 7 0.0658537 101 6 0.0617284 183 7 0.1658824 131 6 0.170431 169 9 0.1719353 277 8 0.1643422 274 10 0.314003 264 8 0.3081395 120 5 0.276238 198 6 0.2471373 203 7 0.1445858 0.233812 0.119918 0.144330 0.143385 0.2737810 0.088512 0.145404 0.154768 0.1310445 0.157629 0.0621768 0.119524 0.134862 0.136808 0.1290698 0.055183 0.1617017 0.1581107 0.165082 0.155416 0.1302326 0.144812 0.115584 0.165490 0.093187 0.138652 0.114696 0.1072410 0.123138 0.149728 0.1460123 0.1351174 0.0870675 0.0667335 0.0804378 0.147706 0.1214696 0.091732 0.155753 0.1899882 0.178975 0.1418149 3 0.080808 0.119698 -0.00588246 9 0.209785 0.184131 0.0256539 0.5074336 5.3373e-01 insignificant 1 1.000000 insignificant 0.2050442 5.3679e-01 insignificant 1 1.000000 insignificant -3.4937e-03 0.887154 insignificant 1 insignificant 0.080366 0.1010587 0.0146411 9 0.149000 0.1199425 0.0290571 6.5816e-01 9.9714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5503e-01 9.9960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06005126 6.2297e-02 insignificant 4.1531e-01 insignificant 0.080560 0.098299 -0.01215463 6 0.176090 0.3059808 -0.12989032 8.3657e-01 1.4535e-02 weaklyHypometh 1.0000e+00 5.7904e-01 insignificant 8.5881e-01 4.5554e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.07126537 6.5867e-02 insignificant 9.1482e-01 insignificant 0.119698 0.1009615 0.0240107 9 0.184131 0.1113752 0.0727563 3.1527e-01 9.2288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4656e-01 9.7622e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0635450 3.2231e-02 weaklyHypermeth 2.5378e-01 insignificant 0.119735 0.098299 -0.02128181 6 0.216167 0.3059808 -0.08981348 8.6220e-01 4.5930e-03 weaklyHypometh 1.0000e+00 3.8275e-01 insignificant 9.9094e-01 3.6456e-03 weaklyHypometh 1.0000e+00 2.8043e-01 insignificant -0.0677716 6.6037e-02 insignificant 1.00000000 insignificant 0.1017442 0.098299 -0.03748543 6 0.1417502 0.3059808 -0.16423055 9.9544e-01 1.5314e-02 weaklyHypometh 1.0000000 9.8797e-02 weaklyHypometh 0.99971031 3.7400e-02 weaklyHypometh 1.00000 2.7299e-01 insignificant -0.13131663 5.2553e-03 weaklyHypometh 8.4763e-02 weaklyHypometh chr19 56885487 56886487 150872 ENSG00000210345 0.275325 158 7 0.308685 139 6 0.116378 205 7 0.2088435 72 4 0.148819 173 8 0.4743874 163 6 0.219004 229 7 0.1834215 181 7 0.115399 233 7 0.192945 261 7 0.211090 207 7 0.038492 224 7 0.2564293 170 7 0.331585 28 2 0.1280243 164 5 0.108846 210 6 0.053571 189 6 0.3108796 67 4 0.2375865 126 6 0.227154 173 6 0.257779 107 8 0.2476768 113 5 0.139689 177 7 0.148174 120 8 0.2779018 59 5 0.244306 187 6 0.210530 155 7 0.196772 115 8 0.277778 126 5 0.230455 205 7 0.228815 198 7 0.2013126 217 7 0.1624564 158 6 0.0724390 94 5 0.0925926 121 5 0.2073529 48 4 0.178932 156 8 0.2149191 223 6 0.2033091 170 8 0.431754 194 6 0.3961794 70 3 0.342798 107 4 0.3089216 140 5 0.1839405 0.267210 0.152558 0.176810 0.155194 0.3191381 0.112604 0.173147 0.147405 0.1497015 0.177852 0.0450770 0.152057 0.157611 0.158035 0.1642012 0.063398 0.2008547 0.1920738 0.210015 0.197719 0.1656805 0.143904 0.130033 0.210535 0.099109 0.124546 0.133542 0.1137484 0.142330 0.190483 0.1709086 0.1589335 0.1107663 0.0848977 0.1023321 0.166972 0.1545323 0.112087 0.198147 0.2417009 0.222246 0.1804154 2 0.091934 0.132659 -0.00429578 7 0.171846 0.228151 -0.0563051 0.2151086 4.1441e-01 insignificant 1 1.000000 insignificant 0.1168515 3.0846e-01 insignificant 1 1.000000 insignificant -1.4423e-02 0.592234 insignificant 1 insignificant 0.091934 0.1287500 0.0121856 7 0.171846 0.1405772 0.0312685 7.5198e-01 9.8357e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7532e-01 9.9670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05256127 1.3858e-01 insignificant 7.8738e-01 insignificant 0.092207 0.149780 -0.02569773 4 0.210034 0.3729233 -0.16288972 9.3125e-01 3.0694e-03 lowCoverage 1.0000e+00 2.1924e-01 lowCoverage 9.7360e-01 1.1688e-02 lowCoverage 1.0000e+00 0.64931600 lowCoverage -0.12924915 2.5451e-02 weaklyHypometh 4.9240e-01 insignificant 0.132659 0.1287500 0.0197749 7 0.228151 0.1405772 0.0875736 3.9768e-01 7.0062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6922e-01 8.6047e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0669838 4.1051e-02 weaklyHypermeth 3.0865e-01 insignificant 0.132693 0.149780 -0.03980793 4 0.256629 0.3729233 -0.11629460 9.9032e-01 7.8501e-04 lowCoverage 1.0000e+00 9.8420e-02 lowCoverage 9.9995e-01 6.0976e-04 lowCoverage 1.0000e+00 1.2195e-01 lowCoverage -0.1148266 4.0659e-02 weaklyHypometh 0.88389424 insignificant 0.1298865 0.149780 -0.05515077 4 0.1718166 0.3729233 -0.20110673 9.9241e-01 4.2861e-03 lowCoverage 1.0000000 3.3226e-02 lowCoverage 0.99950644 1.1881e-02 lowCoverage 1.00000 1.1001e-01 lowCoverage -0.18181043 6.0376e-03 weaklyHypometh 9.4337e-02 weaklyHypometh chr19 56885710 56886710 150873 ENSG00000210345 0.310455 90 6 0.343750 68 5 0.129190 133 6 0.2436508 62 3 0.167421 124 7 0.5351884 122 5 0.248980 120 6 0.2027778 111 6 0.129824 128 6 0.220509 171 6 0.239204 137 6 0.043991 142 6 0.2930621 107 6 0.331585 28 2 0.1421727 95 4 0.120940 118 5 0.061224 91 5 0.3552910 53 3 0.2682806 82 5 0.254762 114 5 0.261334 98 7 0.2786364 109 5 0.159644 123 6 0.166696 98 7 0.3176020 54 4 0.265476 95 5 0.240605 142 6 0.224882 101 7 0.310417 66 4 0.252625 108 6 0.261503 120 6 0.2348647 142 6 0.1875000 76 5 0.0777778 53 4 0.1111111 95 4 0.2369748 35 3 0.196825 146 7 0.2442074 122 5 0.2299320 111 7 0.489409 123 5 0.4622093 59 2 0.386054 82 3 0.3473389 115 4 0.2488686 0.367647 0.210823 0.251100 0.220401 0.4327337 0.156062 0.233894 0.209340 0.2126013 0.246577 0.0640170 0.215946 0.218131 0.212257 0.2331933 0.090036 0.2852474 0.2632278 0.284014 0.187423 0.2352941 0.204368 0.184668 0.298995 0.127051 0.176876 0.189653 0.1545391 0.189137 0.270517 0.2427189 0.2205882 0.1470588 0.1205690 0.1453287 0.237129 0.2153018 0.152061 0.269567 0.3432559 0.298820 0.2394134 1 0.140267 0.180732 -0.00412602 6 0.187776 0.249245 -0.0614687 0.1590753 4.3830e-01 insignificant 1 1.000000 insignificant 0.1195145 2.3707e-01 insignificant 1 1.000000 insignificant -1.5744e-02 0.595394 insignificant 1 insignificant 0.140267 0.1897533 0.0186883 6 0.187776 0.1535360 0.0342403 7.5382e-01 9.7984e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0410e-01 9.9398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05638021 1.5655e-01 lowCoverage 8.4691e-01 lowCoverage 0.140940 0.197959 -0.03251208 3 0.234720 0.4162665 -0.18154608 8.6916e-01 1.0043e-02 lowCoverage 1.0000e+00 5.0213e-01 lowCoverage 9.4441e-01 2.0833e-02 lowCoverage 1.0000e+00 0.88159562 lowCoverage -0.15087592 2.5184e-02 lowCoverage 4.9240e-01 lowCoverage 0.180732 0.1897533 0.0270239 6 0.249245 0.1535360 0.0957090 4.0725e-01 6.3331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1711e-01 8.5171e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0721245 4.9147e-02 lowCoverage 3.5874e-01 lowCoverage 0.181090 0.197959 -0.05814293 3 0.286556 0.4162665 -0.12971022 9.8426e-01 6.5493e-04 lowCoverage 1.0000e+00 9.8420e-02 lowCoverage 9.9978e-01 1.3914e-03 lowCoverage 1.0000e+00 2.0942e-01 lowCoverage -0.1351316 3.9654e-02 lowCoverage 0.88119191 lowCoverage 0.1923077 0.197959 -0.08488856 3 0.1919201 0.4162665 -0.22434645 9.7913e-01 2.1343e-02 lowCoverage 1.0000000 1.3094e-01 lowCoverage 0.99810538 3.1250e-02 lowCoverage 1.00000 2.3855e-01 lowCoverage -0.20725613 6.7179e-03 lowCoverage 9.9836e-02 lowCoverage chr19 59077961 59078961 150881 PRKCG ENSG00000126583 0.043184 336 11 0.059375 319 13 0.227949 334 14 0.0403736 439 16 0.054052 285 13 0.1063697 621 16 0.078866 392 16 0.0656449 318 15 0.081010 509 16 0.044402 532 16 0.104435 352 13 0.043312 312 16 0.0736837 435 16 0.071376 227 14 0.0524850 466 16 0.109718 188 10 0.160523 201 11 0.0541093 537 14 0.1143650 303 13 0.067399 549 16 0.108860 205 13 0.0434825 376 14 0.079673 405 16 0.035464 211 9 0.0165765 353 14 0.039104 453 15 0.046242 465 14 0.114141 301 15 0.127632 331 13 0.080294 519 14 0.023147 484 13 0.1163377 675 16 0.0092029 316 14 0.0151782 248 11 0.3027027 224 7 0.0151302 114 9 0.077738 282 12 0.0297807 425 14 0.0974587 546 16 0.102819 540 13 0.0684432 392 13 0.082762 425 14 0.0663573 480 13 0.0696343 0.085437 0.128072 0.058677 0.097827 0.0983186 0.151963 0.088919 0.096052 0.1042944 0.160917 0.0591033 0.085676 0.126893 0.082411 0.1310729 0.079282 0.0830667 0.0948186 0.089160 0.110111 0.0264555 0.091957 0.057651 0.035908 0.059666 0.068749 0.076986 0.1099945 0.073461 0.034617 0.0697043 0.0182506 0.0174717 0.3737420 0.0266479 0.082830 0.0378597 0.054557 0.048868 0.1070821 0.074354 0.0798734 6 0.101254 0.073058 0.02817581 16 0.093199 0.064575 0.0286239 0.0091250 9.9801e-01 weaklyHypermeth 1 1.000000 insignificant 0.0029485 9.9843e-01 weaklyHypermeth 1 1.000000 insignificant 1.3386e-02 0.394362 insignificant 1 insignificant 0.100917 0.0472343 0.0726173 14 0.067613 0.0324185 0.0351946 2.5908e-05 9.9472e-01 weaklyHypermeth 1.9050e-04 1.0000e+00 weaklyHypermeth 4.7923e-05 9.9983e-01 weaklyHypermeth 6.0662e-04 1.0000e+00 weaklyHypermeth 0.00767615 8.7817e-01 insignificant 1.0000e+00 insignificant 0.101072 0.082249 0.02686784 13 0.081598 0.1089065 -0.02730806 3.4226e-01 6.8338e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6768e-01 3.4862e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00093665 9.4175e-01 insignificant 1.0000e+00 insignificant 0.072674 0.0472343 0.0380443 14 0.049758 0.0324185 0.0173395 4.7983e-03 9.8493e-01 weaklyHypermeth 2.8562e-02 1.0000e+00 weaklyHypermeth 2.8386e-02 9.9942e-01 weaklyHypermeth 1.7631e-01 1.00000000 insignificant -0.0057094 9.0963e-01 insignificant 1.0000e+00 insignificant 0.073181 0.082249 -0.00022051 13 0.074771 0.1089065 -0.03413574 9.5611e-01 2.3004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8424e-01 1.2833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0143222 3.1241e-01 insignificant 1.00000000 insignificant 0.0472637 0.081297 -0.04128529 11 0.0343255 0.0825033 -0.04817785 9.4073e-01 2.5651e-04 weaklyHypometh 1.0000000 2.6720e-03 weaklyHypometh 0.99773161 1.1165e-03 weaklyHypometh 1.00000 1.5950e-02 weaklyHypometh -0.00861280 8.6225e-01 insignificant 1.0000e+00 insignificant chr19 59078185 59079185 150882 PRKCG ENSG00000126583 0.031496 264 9 0.041402 265 11 0.210716 301 12 0.0292240 363 14 0.055227 238 11 0.0858728 504 14 0.059301 341 14 0.0630746 260 13 0.072615 452 14 0.040518 463 14 0.070362 255 11 0.035227 273 14 0.0502238 372 14 0.047739 189 12 0.0441098 412 14 0.053964 166 8 0.160523 201 11 0.0309011 398 12 0.0961975 205 11 0.063660 401 14 0.098137 175 11 0.0258848 370 14 0.074583 332 14 0.040193 206 9 0.0201286 346 14 0.022264 354 13 0.047096 367 12 0.121033 283 13 0.110811 262 11 0.066566 372 12 0.012769 356 11 0.0955757 545 14 0.0060533 253 12 0.0153624 175 9 0.2533784 178 5 0.0151302 114 9 0.077038 227 10 0.0340351 303 12 0.0977548 462 14 0.103318 388 11 0.0484355 321 11 0.076505 302 12 0.0485809 380 11 0.0662147 0.079276 0.113388 0.054987 0.101184 0.0876934 0.146811 0.089086 0.093352 0.1033320 0.147569 0.0563336 0.076274 0.120102 0.080639 0.1082862 0.071851 0.0741044 0.0874398 0.088888 0.104559 0.0177954 0.090043 0.061212 0.038126 0.052095 0.070561 0.078310 0.1011131 0.067104 0.030518 0.0565651 0.0174477 0.0176930 0.3659437 0.0205303 0.082799 0.0401981 0.052045 0.045798 0.1002004 0.070936 0.0724736 6 0.082239 0.054449 0.02812373 14 0.087747 0.057619 0.0301277 0.0062817 9.9180e-01 weaklyHypermeth 1 1.000000 insignificant 0.0063651 9.9053e-01 weaklyHypermeth 1 1.000000 insignificant 5.8641e-03 0.698664 insignificant 1 insignificant 0.081746 0.0352000 0.0630966 12 0.052116 0.0256929 0.0264235 1.3056e-04 9.8403e-01 weaklyHypermeth 9.0670e-04 1.0000e+00 weaklyHypermeth 1.9605e-03 9.9886e-01 weaklyHypermeth 1.6066e-02 1.0000e+00 weaklyHypermeth 0.00028465 9.9457e-01 insignificant 1.0000e+00 insignificant 0.081988 0.065300 0.02116681 11 0.068659 0.1051478 -0.03648924 4.3256e-01 5.4554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9138e-01 2.4736e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00780130 6.2300e-01 insignificant 1.0000e+00 insignificant 0.053897 0.0352000 0.0265400 12 0.035611 0.0256929 0.0099176 6.9368e-02 9.6204e-01 insignificant 3.3511e-01 1.0000e+00 insignificant 7.7921e-02 9.9737e-01 insignificant 4.3050e-01 1.00000000 insignificant -0.0055795 8.9450e-01 insignificant 1.0000e+00 insignificant 0.054545 0.065300 -0.00600304 11 0.064398 0.1051478 -0.04074966 9.6800e-01 1.6721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7394e-01 1.2831e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0136654 4.1385e-01 insignificant 1.00000000 insignificant 0.0352282 0.063991 -0.03726775 9 0.0274058 0.0747231 -0.04731731 8.9343e-01 6.3192e-03 weaklyHypometh 1.0000000 4.6464e-02 weaklyHypometh 0.98985839 1.1146e-02 weaklyHypometh 1.00000 1.0515e-01 insignificant -0.00808595 8.4828e-01 insignificant 1.0000e+00 insignificant chr19 59184701 59185701 150883 MIR935 ENSG00000215998 0.782911 59 2 0.532665 170 6 0.589286 129 6 0.6949761 47 2 0.720734 70 5 0.6319689 123 6 0.530862 65 5 0.7937360 136 6 0.691026 82 6 0.594228 96 5 0.734723 223 6 0.589988 53 5 0.7520584 191 6 0.578829 83 4 0.5969183 96 4 0.498611 56 2 0.416667 26 2 0.6513002 102 2 0.5694885 277 6 0.700811 112 6 0.798816 101 6 0.6534993 68 4 0.678902 82 6 0.797222 41 4 0.8657895 47 2 0.719091 224 6 0.710529 177 6 0.690476 38 4 0.647023 252 6 0.776052 198 6 0.663160 259 6 0.6712297 113 6 0.4169859 134 6 0.6856021 203 6 0.8522342 208 5 0.2000000 15 2 0.644768 113 6 0.4591279 228 6 0.5483660 52 5 0.650265 92 5 0.5162500 52 2 0.400000 40 2 0.5166667 36 2 0.7133308 0.403398 0.473153 0.589534 0.688759 0.5814205 0.484205 0.732851 0.628323 0.5990198 0.694513 0.4877353 0.742746 0.637427 0.586631 0.4477969 0.532105 0.5933806 0.4921365 0.648997 0.813998 0.5776982 0.573185 0.843870 0.743886 0.659696 0.626979 0.706076 0.5692007 0.695091 0.607086 0.6326652 0.3462513 0.6188233 0.8883590 0.1122378 0.531327 0.1989312 0.523552 0.612735 0.4996360 0.255172 0.5320562 2 0.632514 0.653750 -0.02944689 6 0.658626 0.695229 -0.0366027 0.9779672 8.6150e-02 insignificant 1 1.000000 insignificant 0.9825409 8.8439e-03 weaklyHypometh 1 0.853993 insignificant -9.0060e-02 0.005851 lowCoverage 1 lowCoverage 0.632514 0.5116537 0.1231112 6 0.658626 0.5587155 0.0999106 6.1867e-04 5.8394e-01 weaklyHypermeth 4.0173e-03 1.0000e+00 weaklyHypermeth 4.6538e-02 4.7527e-01 weaklyHypermeth 2.5292e-01 1.0000e+00 insignificant 0.08946951 3.9428e-01 lowCoverage 1.0000e+00 lowCoverage 0.632514 0.518382 0.08923525 2 0.658626 0.5245508 0.13407523 5.6195e-04 8.7929e-01 lowCoverage 1.7029e-02 1.0000e+00 lowCoverage 8.3756e-02 8.0120e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.10627981 5.4829e-02 lowCoverage 8.1834e-01 lowCoverage 0.653750 0.5116537 0.1481639 6 0.695229 0.5587155 0.1365132 1.5366e-04 5.6501e-01 weaklyHypermeth 1.1554e-03 1.0000e+00 weaklyHypermeth 1.1246e-02 3.2969e-01 weaklyHypermeth 8.1978e-02 1.00000000 weaklyHypermeth 0.1795295 1.1685e-01 insignificant 6.9967e-01 insignificant 0.653750 0.518382 0.11334965 2 0.695229 0.5245508 0.17067790 4.3879e-05 9.8422e-01 lowCoverage 1.8283e-03 1.0000e+00 lowCoverage 8.9049e-03 8.9459e-01 lowCoverage 2.5345e-01 1.0000e+00 lowCoverage 0.1963398 4.3689e-03 lowCoverage 0.24271475 lowCoverage 0.5116537 0.518382 -0.03594874 2 0.5587155 0.5245508 0.03416467 3.6086e-01 7.0341e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.72363663 8.1939e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.01681030 8.7451e-01 lowCoverage 1.0000e+00 lowCoverage chr19 60575462 60576462 150890 IL11 ENSG00000095752 0.477680 412 15 0.367248 626 15 0.401447 586 15 0.3947520 404 15 0.366844 477 15 0.4540461 760 15 0.455974 555 15 0.4309264 471 14 0.320324 466 15 0.355074 561 15 0.507743 697 15 0.464916 417 15 0.2026081 494 16 0.473243 404 12 0.2873762 663 15 0.407449 351 14 0.267536 74 5 0.4210777 525 15 0.2060479 950 15 0.397719 730 15 0.412904 299 15 0.3094843 219 9 0.382459 417 15 0.361888 281 15 0.4474827 265 12 0.404697 647 15 0.313858 682 15 0.333542 287 15 0.567088 672 15 0.336256 723 15 0.303845 757 15 0.5738922 654 15 0.1645370 490 15 0.2595122 621 15 0.3231587 319 7 0.1789661 190 10 0.275835 491 15 0.3433441 800 15 0.3308650 630 15 0.436055 559 15 0.2739381 344 16 0.391196 525 16 0.4249202 405 15 0.5326719 0.308137 0.485489 0.461702 0.439619 0.5297319 0.534727 0.453248 0.430586 0.4456309 0.566225 0.5348714 0.215616 0.481455 0.332453 0.5336625 0.335598 0.4329026 0.1767264 0.381688 0.419557 0.3781409 0.423649 0.359323 0.539104 0.448369 0.425557 0.361590 0.5194313 0.303049 0.353159 0.5118725 0.2374064 0.3565113 0.3017162 0.2141559 0.288084 0.4087241 0.434153 0.477064 0.3572322 0.489759 0.4366788 12 0.418723 0.399288 0.00912081 15 0.429093 0.384415 0.0446779 0.5155901 9.8676e-01 insignificant 1 1.000000 insignificant 0.8813508 8.2247e-01 insignificant 1 1.000000 insignificant -1.2615e-02 0.708356 insignificant 1 insignificant 0.419324 0.2755067 0.0980123 15 0.399400 0.3574929 0.0419074 7.0382e-17 9.9676e-01 weaklyHypermeth 1.3535e-15 1.0000e+00 weaklyHypermeth 3.9104e-14 9.7408e-01 weaklyHypermeth 3.5549e-12 1.0000e+00 weaklyHypermeth 0.12544277 5.8750e-03 weaklyHypermeth 6.2766e-02 weaklyHypermeth 0.418362 0.388551 -0.00775015 15 0.338184 0.3220965 0.01608705 5.0967e-01 8.6982e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3047e-01 8.9894e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01160679 7.5731e-01 insignificant 1.0000e+00 insignificant 0.399593 0.2751032 0.0925824 15 0.434585 0.3161764 0.1184090 3.5773e-17 9.9754e-01 weaklyHypermeth 1.0221e-15 1.0000e+00 weaklyHypermeth 5.0649e-12 9.9863e-01 weaklyHypermeth 3.8675e-10 1.00000000 weaklyHypermeth 0.1380574 4.6399e-03 weaklyHypermeth 5.3332e-02 weaklyHypermeth 0.399051 0.388460 -0.01641946 15 0.372856 0.3043061 0.06855003 4.8932e-01 2.5676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1144e-01 7.7751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0242214 5.6403e-01 insignificant 1.00000000 insignificant 0.2752577 0.390931 -0.10487946 15 0.3253676 0.3543061 -0.02893855 1.0000e+00 4.1468e-16 weaklyHypometh 1.0000000 2.5918e-14 weaklyHypometh 0.99998514 1.7390e-08 weaklyHypometh 1.00000 1.9323e-06 weaklyHypometh -0.11383598 2.6164e-02 weaklyHypometh 2.5921e-01 insignificant chr19 60575645 60576645 150891 IL11 ENSG00000095752 0.528162 384 14 0.374155 507 14 0.363864 471 14 0.4122554 362 13 0.325017 387 14 0.4012588 600 14 0.443547 403 14 0.3659645 331 13 0.297101 357 14 0.271920 374 14 0.491457 529 14 0.394507 258 14 0.1862834 357 15 0.413433 246 9 0.2289762 454 14 0.358142 256 13 0.264614 110 6 0.3721250 416 14 0.2046639 631 14 0.358379 546 14 0.402354 248 14 0.2527559 188 8 0.345636 359 14 0.368367 194 13 0.4557155 413 10 0.345520 521 14 0.259711 565 14 0.346591 195 13 0.491016 472 14 0.326431 547 14 0.303780 554 14 0.5311923 521 14 0.1141745 449 14 0.1911101 561 14 0.1979756 378 9 0.1492312 252 8 0.277604 379 13 0.2173410 681 14 0.2859614 513 14 0.366913 470 14 0.2075365 290 14 0.334465 533 14 0.3656518 350 14 0.4872954 0.269159 0.398361 0.423114 0.341151 0.4011407 0.465082 0.374797 0.364867 0.3298564 0.493603 0.4608920 0.168199 0.398407 0.235873 0.4160357 0.213478 0.3293784 0.1362029 0.336503 0.345922 0.2986897 0.321360 0.320567 0.451762 0.354463 0.301574 0.317208 0.4640965 0.251884 0.308760 0.4990419 0.1772183 0.2401972 0.2609422 0.1497025 0.206699 0.1901337 0.272454 0.372000 0.2811829 0.406469 0.3173275 10 0.347881 0.333473 0.00485197 14 0.414026 0.376328 0.0376980 0.6210542 9.7503e-01 insignificant 1 1.000000 insignificant 0.9700394 7.2978e-01 insignificant 1 1.000000 insignificant -1.6298e-02 0.616793 insignificant 1 insignificant 0.348504 0.2007407 0.1287055 14 0.378548 0.3203068 0.0582410 1.7364e-20 9.9993e-01 weaklyHypermeth 4.4523e-19 1.0000e+00 weaklyHypermeth 1.6209e-15 9.9489e-01 weaklyHypermeth 2.3203e-13 1.0000e+00 weaklyHypermeth 0.16155188 1.3049e-04 weaklyHypermeth 3.1828e-03 weaklyHypermeth 0.347417 0.292672 0.02657624 14 0.308763 0.3000514 0.00871136 1.7784e-01 9.8736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2791e-01 9.8495e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.04068569 2.9234e-01 insignificant 1.0000e+00 insignificant 0.333753 0.2002225 0.1254496 14 0.434389 0.2665951 0.1677942 1.0226e-20 1.0000e+00 weaklyHypermeth 3.5261e-19 1.0000e+00 weaklyHypermeth 9.0217e-14 9.9998e-01 weaklyHypermeth 1.2888e-11 1.00000000 weaklyHypermeth 0.1778497 1.1248e-04 weaklyHypermeth 3.6183e-03 weaklyHypermeth 0.333124 0.292479 0.02433001 14 0.361778 0.2765280 0.08525020 1.6362e-01 7.0428e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5404e-02 9.6883e-01 weaklyHypermeth 8.5668e-01 1.0000e+00 insignificant 0.0569835 1.7617e-01 insignificant 1.00000000 insignificant 0.2004446 0.294722 -0.10257970 14 0.2803248 0.3353516 -0.05502671 1.0000e+00 1.2603e-17 weaklyHypometh 1.0000000 9.6944e-16 weaklyHypometh 0.99996316 8.2282e-09 weaklyHypometh 1.00000 1.0788e-06 weaklyHypometh -0.12086619 1.2865e-02 weaklyHypometh 1.4316e-01 insignificant chr19 60861596 60862596 150896 U2AF2 ENSG00000063244 0.946668 253 10 0.822741 163 14 0.928444 224 11 0.9044613 260 10 0.677619 64 4 0.9665216 341 10 0.958566 79 6 0.8090909 72 4 0.725000 26 2 0.970000 37 2 0.886979 104 8 0.740741 30 2 0.8000000 24 2 0.416667 15 2 0.9687500 37 2 0.848214 32 2 0.728252 46 4 0.8088539 277 6 0.9680009 148 6 0.976681 190 9 0.715152 76 4 0.8449793 131 6 0.939852 153 9 0.750000 26 2 0.7833333 214 8 0.906335 149 12 0.695222 93 8 0.622222 26 2 0.818122 72 6 0.855437 142 12 0.953322 147 12 0.8391001 235 10 0.8480592 146 7 0.9461436 132 6 0.9843260 193 9 0.9035838 110 8 0.608333 72 7 0.9571813 132 12 0.9060204 328 10 0.919003 212 11 0.9851393 215 6 0.973529 156 6 0.9006238 243 6 0.9260489 0.852390 0.956186 0.981984 0.877761 0.9706299 0.932483 0.876289 0.938094 0.9113402 0.934094 0.8127148 1.000000 0.969022 0.974227 0.7511046 0.910021 0.9299209 0.9571141 0.962200 0.986254 0.9891916 0.970936 0.989691 0.974227 0.978623 0.832311 0.874227 0.9693994 0.912059 0.911668 0.9427785 0.8676976 0.9338704 0.9799509 0.8573372 0.934708 0.9478048 0.957978 0.967090 0.9732973 0.960431 0.9402377 2 0.927243 0.937842 -0.01146226 6 0.734695 0.738251 -0.0035553 0.9434427 3.3465e-01 insignificant 1 1.000000 insignificant 0.9318220 6.2018e-01 insignificant 1 1.000000 insignificant 3.2356e-02 0.454908 insignificant 1 insignificant 0.928957 0.9159236 0.0121485 6 0.751513 0.7613856 -0.0098723 8.9359e-01 8.0376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9087e-01 8.8327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03199204 6.3379e-01 insignificant 1.0000e+00 insignificant 0.929788 0.966205 -0.02902930 6 0.849917 0.9375605 -0.08764373 9.8692e-01 3.7418e-02 weaklyHypometh 1.0000e+00 9.0483e-01 insignificant 9.2262e-01 1.1449e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.09425069 1.5206e-02 weaklyHypometh 3.7612e-01 insignificant 0.939767 0.9159236 0.0259388 6 0.820278 0.7613856 0.0588928 6.4863e-01 9.8762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8294e-01 9.6964e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0643483 3.4341e-01 insignificant 1.0000e+00 insignificant 0.944099 0.966205 -0.01956084 6 0.790001 0.9375605 -0.14755973 8.8770e-01 2.0203e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5232e-01 4.0591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1266069 2.1065e-03 weaklyHypometh 0.19150415 insignificant 0.9204108 0.966028 -0.04146316 6 0.8836863 0.9286405 -0.04495425 9.8397e-01 7.7269e-02 insignificant 1.0000000 4.0455e-01 insignificant 0.98506018 6.3690e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06225865 3.3518e-01 insignificant 1.0000e+00 insignificant chr19 63615337 63616337 150908 ENSG00000221849 0.818882 457 15 0.746314 368 17 0.782249 215 17 0.8096591 233 13 0.763457 133 15 0.7950422 445 17 0.753278 195 15 0.7184980 305 17 0.634276 126 14 0.832384 160 12 0.849284 521 17 0.728608 125 11 0.8513462 294 17 0.818182 55 5 0.8462628 214 17 0.714799 94 10 0.708767 93 7 0.7713212 252 14 0.8391792 310 17 0.735218 414 17 0.857804 109 10 0.7288000 141 12 0.801037 273 17 0.847008 108 11 0.7906743 118 12 0.827501 483 17 0.843682 169 14 0.824405 62 5 0.802053 257 13 0.744818 409 17 0.821158 417 17 0.8016251 714 17 0.7319773 300 16 0.7523370 271 17 0.7446114 286 17 0.7249053 111 10 0.800481 112 7 0.7591755 427 16 0.8302475 327 15 0.866587 505 17 0.8325277 313 15 0.764702 254 9 0.8518019 285 14 0.8106812 0.782015 0.777819 0.823918 0.769082 0.7911298 0.768232 0.759702 0.666073 0.8415392 0.849765 0.7814221 0.848197 0.810964 0.854097 0.7012291 0.750356 0.8103769 0.8372032 0.806274 0.770656 0.6999957 0.804325 0.853138 0.746786 0.833804 0.810511 0.859217 0.8029986 0.779015 0.813671 0.7993819 0.7131934 0.7539961 0.6876929 0.7048745 0.774599 0.7415620 0.830092 0.873287 0.8453035 0.767454 0.8825791 5 0.809904 0.832822 -0.00391256 17 0.758426 0.817403 -0.0589766 0.5726997 2.4356e-01 insignificant 1 1.000000 insignificant 0.6457049 1.2738e-03 weaklyHypometh 1 0.318461 insignificant -3.1697e-02 0.077064 insignificant 1 insignificant 0.809742 0.7757133 0.0658163 16 0.718509 0.7739435 -0.0554344 1.1266e-07 9.9997e-01 weaklyHypermeth 1.0833e-06 1.0000e+00 weaklyHypermeth 4.1539e-04 9.9707e-01 weaklyHypermeth 4.1128e-03 1.0000e+00 weaklyHypermeth 0.02360235 1.8300e-01 insignificant 9.6825e-01 insignificant 0.810066 0.814133 -0.04069063 15 0.803040 0.8414045 -0.03836485 9.9958e-01 1.7911e-03 weaklyHypometh 1.0000e+00 1.7911e-01 insignificant 9.9974e-01 1.1833e-03 weaklyHypometh 1.0000e+00 0.16903729 insignificant -0.05332281 3.6627e-02 weaklyHypometh 6.4258e-01 insignificant 0.832822 0.7754153 0.0705182 16 0.817403 0.7613848 0.0560181 5.1124e-08 9.9999e-01 weaklyHypermeth 5.9446e-07 1.0000e+00 weaklyHypermeth 1.8894e-06 9.9999e-01 weaklyHypermeth 3.8560e-05 1.00000000 weaklyHypermeth 0.0552991 3.3822e-03 weaklyHypermeth 4.2812e-02 weaklyHypermeth 0.832771 0.814133 -0.04106861 15 0.806662 0.8414045 -0.03474260 9.9969e-01 7.8736e-04 weaklyHypometh 1.0000e+00 9.8420e-02 weaklyHypometh 9.5462e-01 1.6052e-02 weaklyHypometh 1.0000e+00 8.9178e-01 insignificant -0.0216261 3.2980e-01 insignificant 1.00000000 insignificant 0.7752660 0.814133 -0.11138726 14 0.7473486 0.8414045 -0.09405584 9.9999e-01 1.5098e-09 weaklyHypometh 1.0000000 4.5750e-08 weaklyHypometh 0.99999776 2.4721e-06 weaklyHypometh 1.00000 1.2361e-04 weaklyHypometh -0.07692515 7.4605e-03 weaklyHypometh 1.0658e-01 insignificant chr20 500209 501209 150914 CSNK2A1P ENSG00000101266 0.452731 208 6 0.216704 483 7 0.230354 292 8 0.2183502 215 7 0.089334 253 8 0.1670476 340 8 0.269555 268 8 0.3065727 420 8 0.109391 311 8 0.183855 302 7 0.353209 383 8 0.197619 161 7 0.0915314 341 7 0.336332 211 6 0.1674069 345 8 0.169414 141 8 0.142699 1337 3 0.0778501 240 6 0.0778528 487 8 0.274847 284 9 0.399322 163 9 0.2223810 139 8 0.201119 155 8 0.175678 182 8 0.1969231 82 6 0.241827 534 8 0.209614 338 7 0.154777 147 8 0.255329 353 7 0.138980 545 8 0.164748 451 8 0.2139603 331 8 0.0041336 358 8 0.0000000 181 7 0.0000000 362 8 0.0000000 29 1 0.210674 279 9 0.0014245 508 8 0.1688897 287 6 0.201196 223 7 0.4250653 224 6 0.205365 173 6 0.0408163 134 6 0.2920876 0.119506 0.171824 0.198016 0.176937 0.2266043 0.160277 0.216106 0.154436 0.1979551 0.325786 0.1055760 0.039886 0.245283 0.136643 0.1390053 0.304497 0.1617358 0.0533262 0.164889 0.208307 0.1175505 0.204442 0.078020 0.199875 0.162630 0.128658 0.107660 0.2535239 0.139542 0.188684 0.2190895 0.0070618 0.0000000 0.0000000 0.0018182 0.013058 0.0036927 0.176033 0.159166 0.2149752 0.097774 0.0839370 5 0.229805 0.188304 0.03350997 8 0.212127 0.232809 -0.0206820 0.4116176 2.4435e-02 inconclusive 1 0.740462 insignificant 0.6458424 3.1637e-01 insignificant 1 1.000000 insignificant -7.9220e-03 0.793610 insignificant 1 insignificant 0.229980 0.0110658 0.2222069 8 0.246850 0.1858687 0.0609809 1.1395e-12 9.9999e-01 hypermethylated 1.5827e-11 1.0000e+00 hypermethylated 3.8967e-12 9.9995e-01 hypermethylated 2.0509e-10 1.0000e+00 hypermethylated 0.17059425 2.3226e-03 weaklyHypermeth 3.1386e-02 weaklyHypermeth 0.229991 0.169068 0.04683263 6 0.247092 0.2215248 0.02556716 1.1067e-01 3.2624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2938e-01 8.4006e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00163370 9.8117e-01 insignificant 1.0000e+00 insignificant 0.188414 0.0099125 0.1839349 8 0.253974 0.1118568 0.1421171 5.9627e-18 9.9994e-01 weaklyHypermeth 1.8069e-16 1.0000e+00 weaklyHypermeth 5.4192e-11 1.0000e+00 weaklyHypermeth 3.0107e-09 1.00000000 weaklyHypermeth 0.1785163 1.9558e-03 weaklyHypermeth 2.8000e-02 weaklyHypermeth 0.188304 0.169231 0.01497959 6 0.232809 0.2399852 -0.00717575 1.6669e-01 4.0730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1091e-01 6.8630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0062883 9.2673e-01 insignificant 1.00000000 insignificant 0.0110658 0.169231 -0.15691992 6 0.1858687 0.2399852 -0.05411644 1.0000e+00 3.2401e-08 weaklyHypometh 1.0000000 8.1003e-07 weaklyHypometh 0.99999900 5.7921e-04 weaklyHypometh 1.00000 9.0090e-03 weaklyHypometh -0.17222795 4.8939e-02 weaklyHypometh 4.1125e-01 insignificant chr20 502872 503872 150915 CSNK2A1P ENSG00000101266 0.262733 304 10 0.215392 389 10 0.314062 375 10 0.1322126 171 8 0.041343 144 7 0.0817537 286 10 0.157306 417 9 0.2881586 252 8 0.144141 213 8 0.133235 278 8 0.254434 303 9 0.275794 117 7 0.1036725 305 7 0.416667 8 0 0.0886759 351 8 0.248542 182 7 0.172613 254 7 0.3449443 195 10 0.0553752 181 9 0.134968 360 10 0.382574 90 9 0.1634384 90 7 0.330171 329 11 0.270669 95 8 0.1066138 55 6 0.131359 498 10 0.174377 162 9 0.340035 64 7 0.171143 316 8 0.105054 690 10 0.206791 523 10 0.2172681 431 11 0.2939826 340 10 0.6173518 192 9 0.5611346 216 11 0.5036630 68 7 0.310185 52 4 0.3565653 486 11 0.2868589 327 10 0.409331 304 8 0.2554382 210 8 0.291165 294 8 0.1675689 335 8 0.1939706 0.113865 0.221670 0.113113 0.054756 0.0629050 0.138708 0.213035 0.133103 0.1192828 0.225037 0.2791328 0.064749 0.121951 0.107678 0.1465988 0.175956 0.3304496 0.0434245 0.071164 0.470671 0.0739012 0.247280 0.190181 0.122512 0.108218 0.144683 0.389105 0.1553909 0.073972 0.132472 0.1335113 0.2980428 0.7012865 0.5278131 0.5418270 0.322259 0.3670801 0.128932 0.279406 0.1779818 0.177975 0.2009286 7 0.165192 0.169907 0.00171222 9 0.202379 0.204880 -0.0025010 0.4462283 6.2398e-01 insignificant 1 1.000000 insignificant 0.6214475 2.7774e-01 insignificant 1 1.000000 insignificant -2.3323e-02 0.519164 insignificant 1 insignificant 0.165192 0.4475628 -0.2884165 9 0.202379 0.4365151 -0.2341365 1.0000e+00 1.2665e-21 hypomethylated 1.0000e+00 1.2665e-18 hypomethylated 1.0000e+00 1.1744e-10 hypomethylated 1.0000e+00 1.1744e-07 hypomethylated -0.24717942 5.1682e-03 weaklyHypometh 5.6793e-02 weaklyHypometh 0.165192 0.197959 -0.03617251 8 0.202379 0.2891455 -0.08676692 9.3926e-01 2.9043e-04 weaklyHypometh 1.0000e+00 4.1490e-02 weaklyHypometh 9.6654e-01 5.8887e-03 weaklyHypometh 1.0000e+00 0.53533760 insignificant -0.08877143 8.9297e-02 insignificant 1.0000e+00 insignificant 0.169907 0.4475628 -0.2730282 10 0.204880 0.4365151 -0.2316355 9.9999e-01 3.0959e-15 hypomethylated 1.0000e+00 3.0959e-12 hypomethylated 9.9998e-01 1.7427e-07 hypomethylated 1.0000e+00 0.00017427 hypomethylated -0.2238560 8.1882e-03 weaklyHypometh 8.1882e-02 weaklyHypometh 0.169907 0.197959 -0.03912544 8 0.204880 0.2891455 -0.08426589 8.6718e-01 4.6562e-05 weaklyHypometh 1.0000e+00 1.5521e-02 weaklyHypometh 7.5243e-01 2.6830e-03 weaklyHypometh 1.0000e+00 2.3397e-01 insignificant -0.0654480 2.0359e-01 insignificant 1.00000000 insignificant 0.4475628 0.197959 0.25915900 8 0.4365151 0.2891455 0.14736959 3.5781e-06 9.8555e-01 hypermethylated 0.0011927 1.0000e+00 hypermethylated 0.00039445 9.9618e-01 hypermethylated 0.19989 1.0000e+00 insignificant 0.15840799 4.7555e-02 weaklyHypermeth 4.0301e-01 insignificant chr20 609658 610658 150922 SCRT2 ENSG00000215397 0.831834 233 5 0.674300 170 5 0.831708 158 5 0.8058953 222 5 0.816883 42 3 0.8308958 271 5 0.925783 156 5 0.8964525 116 5 0.816410 121 4 0.946154 101 4 0.912548 159 5 0.778095 46 4 0.8264706 105 4 1.000000 1 0 0.9035877 96 4 0.772727 43 4 0.884573 84 4 0.7983288 249 5 0.8842567 95 5 0.910578 164 5 0.926136 57 4 0.6317143 109 4 0.916240 151 5 0.892872 123 5 0.7570055 64 5 0.900649 220 5 0.868254 69 4 0.790556 36 4 0.865561 106 5 0.907605 245 5 0.865759 237 5 0.8866384 261 5 0.4826819 140 5 0.1741560 67 4 0.0000000 49 1 0.3757576 42 4 0.558289 80 5 0.5702550 199 5 0.7577658 279 5 0.772716 228 5 0.6991444 256 5 0.702239 270 5 0.7940248 302 5 0.8473985 0.666845 0.798494 0.848035 0.804485 0.8598523 0.923616 0.936868 0.840233 0.9324920 0.914868 0.8691964 0.897748 NA 0.883034 0.7515045 0.873317 0.7830885 0.9442633 0.921282 0.901781 0.7606324 0.934763 0.930412 0.781418 0.915122 0.844535 0.821658 0.8991188 0.917010 0.888675 0.8859347 0.5676673 0.1839591 0.3728390 0.4800347 0.633236 0.6476961 0.795634 0.835100 0.7869170 0.764213 0.8639401 4 0.847529 0.882598 -0.03520877 5 0.836683 0.875064 -0.0383801 0.9958170 1.6603e-02 weaklyHypometh 1 0.592947 insignificant 0.7015183 3.5770e-01 insignificant 1 1.000000 insignificant 1.6249e-03 0.956739 lowCoverage 1 lowCoverage 0.847529 0.4419411 0.3622271 5 0.836683 0.4683712 0.3683121 2.3392e-22 1.0000e+00 hypermethylated 6.8801e-21 1.0000e+00 hypermethylated 5.6513e-11 1.0000e+00 hypermethylated 2.6911e-09 1.0000e+00 hypermethylated 0.49218423 2.9598e-03 lowCoverage 3.7349e-02 lowCoverage 0.847529 0.764794 0.06487001 5 0.836683 0.7471322 0.08955114 1.3236e-04 9.8098e-01 weaklyHypermeth 4.7273e-03 1.0000e+00 weaklyHypermeth 1.0901e-03 9.9460e-01 weaklyHypermeth 6.0561e-02 1.00000000 weaklyHypermeth 0.10719619 1.3746e-03 lowCoverage 8.6418e-02 lowCoverage 0.882598 0.4419411 0.4075799 5 0.875064 0.4683712 0.4066923 2.7255e-20 1.0000e+00 hypermethylated 9.0848e-19 1.0000e+00 hypermethylated 4.8290e-10 1.0000e+00 hypermethylated 2.2995e-08 1.00000000 hypermethylated 0.4905593 2.6606e-03 lowCoverage 3.5954e-02 lowCoverage 0.882598 0.764794 0.10316035 5 0.875064 0.7471322 0.12793128 2.2815e-07 9.9996e-01 weaklyHypermeth 1.7550e-05 1.0000e+00 weaklyHypermeth 1.8680e-03 9.9854e-01 weaklyHypermeth 8.1219e-02 1.0000e+00 weaklyHypermeth 0.1055713 4.3222e-03 lowCoverage 0.24271475 lowCoverage 0.4419411 0.764794 -0.28508093 5 0.4683712 0.7471322 -0.27876100 9.9999e-01 4.7677e-07 hypomethylated 1.0000000 9.3485e-06 hypomethylated 0.99999893 9.2064e-06 hypomethylated 1.00000 2.9698e-04 hypomethylated -0.38498803 8.5232e-03 lowCoverage 1.1222e-01 lowCoverage chr20 628120 629120 150923 SCRT2 ENSG00000215397 0.542914 123 3 0.589232 92 6 0.770623 88 6 0.6413818 68 6 0.469907 58 4 0.6016030 177 6 0.641919 61 5 0.7810658 97 6 0.513636 65 6 0.757063 77 6 0.692340 150 6 0.705556 45 3 0.4446694 144 6 0.898462 21 2 0.6519219 89 6 0.888889 14 2 0.703704 34 3 0.7577436 88 6 0.4710369 86 6 0.591926 185 6 0.817540 142 6 0.4750556 111 6 0.574528 78 3 0.675301 59 3 0.6301587 59 6 0.581617 138 6 0.677251 72 6 0.426708 49 4 0.623278 106 6 0.656998 141 6 0.446384 150 6 0.7371582 200 6 0.2042132 122 6 0.0690236 94 6 0.1302693 89 2 0.2873626 57 6 0.427545 93 6 0.4593254 132 6 0.5438115 99 6 0.673470 136 6 0.4913925 79 6 0.540876 101 3 0.7311041 96 3 0.6025369 0.615682 0.811789 0.691817 0.680060 0.6954778 0.758952 0.759459 0.601933 0.7873044 0.771993 0.7086735 0.508605 0.808578 0.692616 0.8088493 0.661740 0.7486536 0.6092853 0.721414 0.816612 0.5457515 0.635560 0.751598 0.706430 0.607052 0.672630 0.628285 0.6974599 0.662082 0.525212 0.7871291 0.2981826 0.1070398 0.1452786 0.3231610 0.446214 0.6008564 0.682583 0.745754 0.5900885 0.656075 0.7478888 3 0.681612 0.655939 0.01062127 6 0.586413 0.713167 -0.1267536 0.6084735 7.7067e-01 insignificant 1 1.000000 insignificant 0.2326609 9.5036e-01 insignificant 1 1.000000 insignificant 4.5615e-02 0.318270 insignificant 1 insignificant 0.681093 0.3168654 0.3739324 6 0.615217 0.2709769 0.3442405 2.6208e-18 9.9997e-01 hypermethylated 5.5762e-17 1.0000e+00 hypermethylated 6.8480e-09 1.0000e+00 hypermethylated 2.0752e-07 1.0000e+00 hypermethylated 0.39282320 7.8772e-04 hypermethylated 1.4178e-02 hypermethylated 0.681093 0.677104 0.00881326 6 0.615217 0.5838381 0.03137927 3.6266e-01 8.0279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2060e-01 8.8104e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.05964888 3.0173e-01 lowCoverage 1.0000e+00 lowCoverage 0.654881 0.3168654 0.3612802 6 0.617555 0.2709769 0.3465786 5.3892e-12 1.0000e+00 hypermethylated 9.1343e-11 1.0000e+00 hypermethylated 4.1317e-07 1.0000e+00 hypermethylated 1.0077e-05 1.00000000 hypermethylated 0.3472082 1.4879e-03 weaklyHypermeth 2.3249e-02 weaklyHypermeth 0.654881 0.677104 -0.00581014 6 0.617555 0.5838381 0.03371734 1.6480e-01 3.9022e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4299e-01 4.9744e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0140339 8.0966e-01 lowCoverage 1.00000000 lowCoverage 0.3168654 0.677104 -0.37179364 6 0.2709769 0.5838381 -0.31286125 9.7084e-01 5.5181e-08 hypomethylated 1.0000000 1.2263e-06 hypomethylated 0.99948789 3.2731e-05 hypomethylated 1.00000 8.6134e-04 hypomethylated -0.33317432 2.4893e-03 lowCoverage 5.5545e-02 lowCoverage chr20 628343 629343 150924 SCRT2 ENSG00000215397 0.564561 159 4 0.587199 132 7 0.771645 133 7 0.6739794 114 7 0.520425 75 5 0.6414361 269 7 0.671429 94 6 0.7962374 138 7 0.549103 107 7 0.762431 102 7 0.716450 186 7 0.727211 66 4 0.4910353 183 7 0.881197 60 3 0.6821668 133 7 0.796131 70 3 0.777778 37 3 0.7698438 143 7 0.4983642 115 7 0.628794 225 7 0.809992 159 7 0.5214762 136 7 0.614301 112 4 0.680174 101 4 0.6421769 66 7 0.623528 194 7 0.696903 99 7 0.476464 89 5 0.646039 129 7 0.681123 201 7 0.518329 190 7 0.7898478 249 7 0.2448811 167 7 0.0948773 102 7 0.0868462 96 3 0.2641680 65 7 0.422489 144 7 0.5008503 156 7 0.5780932 136 7 0.682523 174 7 0.5394202 108 7 0.578515 147 4 0.7429398 139 4 0.6209184 0.607546 0.804987 0.727367 0.708754 0.7324692 0.776858 0.788055 0.633927 0.7898435 0.789817 0.7383673 0.560730 0.805836 0.726820 0.7506508 0.729392 0.7698320 0.6253593 0.747131 0.806231 0.5966012 0.679036 0.744135 0.708001 0.660642 0.701067 0.657628 0.7144897 0.699666 0.610169 0.8088699 0.3363238 0.1356318 0.1162229 0.2835288 0.435403 0.6306851 0.702823 0.743971 0.6375880 0.685730 0.7611017 4 0.715073 0.698956 -0.00438549 7 0.609118 0.726474 -0.1173563 0.7199615 6.1061e-01 insignificant 1 1.000000 insignificant 0.2781760 9.5062e-01 insignificant 1 1.000000 insignificant 3.3675e-02 0.392929 insignificant 1 insignificant 0.714793 0.3410959 0.3687515 7 0.640295 0.2952030 0.3450916 4.6682e-22 1.0000e+00 hypermethylated 1.3338e-20 1.0000e+00 hypermethylated 9.4801e-12 1.0000e+00 hypermethylated 4.7401e-10 1.0000e+00 hypermethylated 0.40635206 1.1554e-03 weaklyHypermeth 1.8339e-02 weaklyHypermeth 0.714793 0.708807 0.00536876 7 0.640295 0.6136821 0.02661241 4.1930e-01 8.1680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8278e-01 9.2934e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.05107257 2.9533e-01 insignificant 1.0000e+00 insignificant 0.698256 0.3410959 0.3676600 7 0.648324 0.2952030 0.3531211 1.2177e-15 1.0000e+00 hypermethylated 2.7676e-14 1.0000e+00 hypermethylated 6.3308e-09 1.0000e+00 hypermethylated 2.4349e-07 1.00000000 hypermethylated 0.3726776 1.6523e-03 weaklyHypermeth 2.4662e-02 weaklyHypermeth 0.698256 0.708807 0.00728172 7 0.648324 0.6136821 0.03464193 1.0637e-01 5.2860e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4235e-01 5.9548e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0173981 7.2578e-01 insignificant 1.00000000 insignificant 0.3410959 0.708807 -0.36746412 7 0.2952030 0.6136821 -0.31847917 9.9091e-01 1.8344e-09 hypomethylated 1.0000000 5.3181e-08 hypomethylated 0.99992928 1.9555e-06 hypomethylated 1.00000 1.0292e-04 hypomethylated -0.35527949 2.1726e-03 weaklyHypometh 5.3690e-02 weaklyHypometh chr20 767998 768998 150926 ENSG00000101278 0.788682 304 7 0.706724 455 7 0.666040 354 7 0.8273914 306 6 0.813134 220 7 0.8362227 828 8 0.809735 339 7 0.7342990 377 7 0.634978 356 7 0.836964 282 7 0.772393 416 8 0.718011 242 7 0.6890214 352 7 0.805556 50 3 0.8266259 338 7 0.787478 194 7 0.809824 205 5 0.7686165 281 7 0.8126611 348 7 0.807232 594 8 0.848031 126 8 0.7677618 185 7 0.721829 283 7 0.784719 238 8 0.7711443 129 8 0.785803 443 7 0.718915 195 7 0.734203 204 7 0.849039 402 8 0.862667 493 7 0.806136 431 7 0.7708618 675 8 0.7622564 443 8 0.7434892 222 7 0.8152894 281 6 0.7646705 74 5 0.728088 284 7 0.6860958 372 7 0.8395365 382 7 0.796873 331 7 0.7352611 265 6 0.864189 323 6 0.7482337 323 7 0.7473347 0.645642 0.771640 0.710024 0.697427 0.7637461 0.720630 0.672223 0.685038 0.7368666 0.737521 0.6751337 0.667455 0.720497 0.750538 0.7301491 0.719003 0.7150067 0.7618734 0.726993 0.803839 0.6896563 0.773161 0.752074 0.714196 0.761574 0.679272 0.768920 0.7635872 0.761086 0.779104 0.7259918 0.8027730 0.7081885 0.8549692 0.7712593 0.831378 0.7611790 0.752143 0.757935 0.7119723 0.787512 0.7874090 6 0.732310 0.772871 -0.02448752 8 0.792287 0.803879 -0.0115920 0.9749491 4.7428e-02 weaklyHypometh 1 1.000000 insignificant 0.9848762 4.5431e-02 weaklyHypometh 1 1.000000 insignificant -1.2513e-02 0.526226 insignificant 1 insignificant 0.732349 0.8183990 -0.0721365 7 0.813058 0.7038508 0.1092077 1.2903e-01 1.3541e-06 weaklyHypometh 5.7603e-01 2.2568e-04 weaklyHypometh 7.9110e-01 1.1758e-05 weaklyHypometh 1.0000e+00 2.9396e-03 weaklyHypometh 0.02259791 3.2786e-01 insignificant 1.0000e+00 insignificant 0.732075 0.773399 -0.04299520 7 0.766323 0.8120981 -0.04577501 9.9328e-01 3.7744e-04 weaklyHypometh 1.0000e+00 4.7180e-02 weaklyHypometh 9.9516e-01 2.2583e-03 weaklyHypometh 1.0000e+00 0.26566839 insignificant -0.02423932 4.2370e-01 insignificant 1.0000e+00 insignificant 0.772871 0.8188882 -0.0453551 7 0.803879 0.7820564 0.0218228 1.4097e-01 5.2995e-03 weaklyHypometh 6.2103e-01 5.8883e-01 insignificant 7.3662e-01 7.1300e-03 weaklyHypometh 1.0000e+00 0.79221724 insignificant 0.0351110 1.4599e-01 insignificant 8.3422e-01 insignificant 0.772632 0.773399 -0.01756585 7 0.779364 0.8120981 -0.03273399 9.7467e-01 2.9161e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6633e-01 1.2920e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0117262 6.9566e-01 insignificant 1.00000000 insignificant 0.8189448 0.773399 0.03048428 7 0.7798135 0.8120981 -0.03228465 8.4944e-02 3.1370e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.08819605 5.2635e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04683723 1.6653e-01 insignificant 9.8537e-01 insignificant chr20 980154 981154 150933 RSPO4 ENSG00000101282 0.903392 107 5 0.884918 57 5 0.900000 48 4 0.9043831 101 5 0.922222 48 4 0.8869825 157 5 0.679167 74 5 0.9346667 64 4 0.702564 33 4 0.944444 10 1 0.872698 146 5 0.600000 13 1 1.0000000 17 1 0.973333 20 1 0.9777778 32 2 0.900000 16 3 NA 0 0 0.9544534 52 4 0.7072464 51 4 0.825079 87 5 0.873636 40 4 1.0000000 10 1 0.842963 44 2 0.910000 49 5 0.9482353 34 4 0.902415 76 5 0.667568 44 1 1.000000 23 3 0.900538 43 2 0.866573 70 5 0.876724 124 5 0.8930070 84 4 0.4584679 88 4 0.1169492 81 4 0.6000000 110 4 0.8500000 29 4 0.586928 70 5 0.3897917 126 5 0.9587807 160 4 0.853311 101 5 0.7924467 106 5 0.964602 122 1 0.8613807 114 5 0.8655926 0.866586 0.908163 0.913630 0.833333 0.8971966 0.728741 0.891429 0.799581 0.9014489 0.848397 0.8775510 1.000000 0.926531 0.938776 0.8656286 NA 0.9325787 0.8873114 0.785876 0.938404 1.0000000 0.897959 0.862245 0.943097 0.976043 0.849421 1.000000 0.9236340 0.896603 0.878958 0.8308120 0.3987916 0.1215266 0.4489796 0.6693878 0.417847 0.3106505 0.949734 0.812573 0.9068482 0.921979 0.8675771 1 0.873786 0.893916 -0.02216694 4 0.864155 0.871992 -0.0078370 0.8508438 5.1361e-02 lowCoverage 1 1.000000 lowCoverage 0.8791669 1.4755e-01 lowCoverage 1 1.000000 lowCoverage -2.3121e-02 0.523899 lowCoverage 1 lowCoverage 0.873786 0.4861111 0.3977267 4 0.864155 0.5073887 0.3567667 1.7117e-20 1.0000e+00 lowCoverage 4.4523e-19 1.0000e+00 lowCoverage 1.5007e-06 9.9999e-01 lowCoverage 2.6798e-05 1.0000e+00 lowCoverage 0.36666116 1.3279e-02 lowCoverage 1.1856e-01 lowCoverage 0.873786 0.883914 -0.01473306 4 0.864155 0.8743456 -0.01019014 8.7038e-01 4.7886e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6390e-01 8.1038e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.01908697 6.5970e-01 lowCoverage 1.0000e+00 lowCoverage 0.893916 0.4861111 0.4366424 4 0.871992 0.5073887 0.3646037 1.4148e-16 1.0000e+00 lowCoverage 3.8237e-15 1.0000e+00 lowCoverage 1.3285e-06 1.0000e+00 lowCoverage 2.7677e-05 1.00000000 lowCoverage 0.3897822 1.0371e-02 lowCoverage 9.9722e-02 lowCoverage 0.893916 0.883914 0.00705736 4 0.871992 0.8743456 -0.00235318 3.0607e-01 7.8490e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.5202e-01 9.3416e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0040341 9.2445e-01 lowCoverage 1.00000000 lowCoverage 0.4861111 0.883914 -0.40380469 5 0.5073887 0.8743456 -0.36695688 9.9967e-01 1.8614e-09 hypomethylated 1.0000000 5.3181e-08 hypomethylated 0.99991541 4.9593e-04 hypomethylated 1.00000 8.2655e-03 hypomethylated -0.38574812 1.0407e-02 lowCoverage 1.2363e-01 lowCoverage chr20 1824491 1825491 150952 SIRPA ENSG00000198053 0.170531 337 12 0.078596 388 14 0.184579 266 14 0.0414888 324 9 0.043563 236 13 0.1465031 531 12 0.054764 345 14 0.0544528 287 7 0.058629 331 7 0.104876 334 6 0.109303 294 14 0.157829 190 5 0.0398522 264 5 0.018160 120 3 0.0308425 261 6 0.060562 175 5 0.088986 125 5 0.0992869 272 6 0.1751904 256 12 0.041134 385 7 0.254774 158 9 0.0208333 99 3 0.173352 192 6 0.131089 202 14 0.1317474 462 9 0.080118 464 14 0.154677 139 8 0.178522 170 6 0.073045 406 12 0.095743 453 14 0.073189 468 14 0.1223707 323 7 0.0467116 379 14 0.0000000 194 11 0.0897436 206 9 0.0631679 236 7 0.204157 253 14 0.0453670 508 14 0.1039249 585 14 0.208126 393 12 0.0265166 251 6 0.054203 203 7 0.0896767 356 14 0.1154953 0.062629 0.217047 0.078180 0.031326 0.1849840 0.049442 0.090444 0.123308 0.0751788 0.135950 0.1181114 0.032736 0.081431 0.043257 0.1286616 0.077711 0.1954133 0.1721729 0.071782 0.234565 0.0309534 0.068177 0.184714 0.117258 0.091668 0.080789 0.062114 0.0781958 0.087062 0.075156 0.1432653 0.0769163 0.0000000 0.2310993 0.0060825 0.039002 0.0523789 0.182383 0.162215 0.0857727 0.138496 0.1660005 4 0.113617 0.096829 0.00694735 7 0.094919 0.124150 -0.0292312 0.5727580 8.2625e-01 insignificant 1 1.000000 insignificant 0.9809968 1.6936e-01 insignificant 1 1.000000 insignificant -3.6165e-02 0.106930 insignificant 1 insignificant 0.113617 0.0366610 0.0772936 7 0.094919 0.0691641 0.0257545 1.9863e-07 9.9907e-01 weaklyHypermeth 1.8917e-06 1.0000e+00 weaklyHypermeth 3.0821e-04 9.9108e-01 weaklyHypermeth 3.1132e-03 1.0000e+00 weaklyHypermeth 0.01309865 6.8430e-01 insignificant 1.0000e+00 insignificant 0.113855 0.133669 -0.02882946 7 0.101246 0.1212154 -0.01996893 9.0813e-03 3.6604e-03 weaklyHypometh 1.7464e-01 2.4402e-01 insignificant 1.4447e-01 6.9552e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.00853304 8.0708e-01 insignificant 1.0000e+00 insignificant 0.097002 0.0377465 0.0609380 12 0.165911 0.1725903 -0.0066794 5.2412e-04 9.9859e-01 weaklyHypermeth 3.5899e-03 1.0000e+00 weaklyHypermeth 5.0109e-04 9.9957e-01 weaklyHypermeth 5.0615e-03 1.00000000 weaklyHypermeth 0.0492641 1.7665e-01 insignificant 9.1741e-01 insignificant 0.096994 0.133669 -0.02042187 12 0.132426 0.1212154 0.01121105 3.2280e-02 9.7089e-04 weaklyHypometh 5.1238e-01 1.0788e-01 insignificant 5.3165e-02 1.2023e-01 insignificant 9.6020e-01 1.0000e+00 insignificant 0.0276324 4.6607e-01 insignificant 1.00000000 insignificant 0.0366817 0.133669 -0.07134234 13 0.0737750 0.1212154 -0.04744039 9.9999e-01 1.2050e-05 weaklyHypometh 1.0000000 1.6507e-04 weaklyHypometh 0.99954869 1.7043e-02 weaklyHypometh 1.00000 1.4820e-01 insignificant -0.02163169 6.2037e-01 insignificant 1.0000e+00 insignificant chr20 11546793 11547793 151530 ENSG00000175816 0.77578 179 8 0.72207 99 8 0.63750 48 8 0.72761 133 7 0.83164 79 8 0.73099 89 7 0.63714 61 3 0.81120 137 8 0.65071 102 8 0.85938 57 8 0.77534 160 8 0.70833 38 3 0.73635 163 8 0.7625 78 8 0.77648 83 8 0.71875 26 0 1.00000 3 0 0.54093 185 6 0.85000 44 1 0.68646 36 5 0.73482 44 7 NA 0 0 0.65353 81 5 0.69792 34 3 0.67879 63 3 0.82505 120 8 0.89618 56 4 0.78125 13 0 0.74375 122 8 0.68324 111 8 0.71201 93 5 0.77187 52 8 0.60474 114 8 0.73636 87 7 0.63910 74 8 0.75000 4 0 0.73551 87 4 0.71205 81 8 0.79991 131 8 0.84058 112 7 0.74510 131 8 0.66155 98 3 0.87143 118 7 0.76514 0.70055 0.60498 0.71705 0.84187 0.73745 0.59442 0.82056 0.72344 0.87562 0.77399 0.70738 0.73138 0.78416 0.76662 0.74425 0.85136 0.78871 0.86207 0.71782 0.74171 NA 0.76579 0.72414 0.67190 0.80848 0.89176 0.82184 0.74099 0.68430 0.81280 0.75575 0.61722 0.73896 0.63146 0.67412 0.61834 0.72475 0.79929 0.83643 0.75604 0.65254 0.86836 0 0.74944 0.75412 -0.0060742 8 0.65237 0.72230 -0.069933 0.78199 0.388821 insignificant 1 1 insignificant 0.91990 0.296885 insignificant 1 1 insignificant 0.0034666 0.91135 lowCoverage 1 lowCoverage 0.74917 0.66219 0.088667 8 0.62340 0.76948 -0.146076 2.8019e-03 0.92369 weaklyHypermeth 0.1867956 1 insignificant 0.1141232 0.95978 insignificant 1.00000 1 insignificant 0.050666 0.14596 insignificant 1 insignificant 0.75224 0.79492 -0.0345676 7 0.74969 0.78909 -0.0394017 0.90185 0.079641 insignificant 1 1 insignificant 0.88475 0.202992 insignificant 1 1 insignificant -0.036755 0.42246 insignificant 1 insignificant 0.75573 0.66219 0.0922357 8 0.75472 0.76948 -0.014759 3.2560e-03 1.00000 weaklyHypermeth 0.2035023 1 insignificant 0.0502009 0.99951 insignificant 1.000000 1 insignificant 0.047199 0.173134 lowCoverage 1 lowCoverage 0.75575 0.79492 -0.0352530 7 0.75708 0.78909 -0.032011 0.83801 0.112052 insignificant 1 1 insignificant 0.71145 0.54057 insignificant 1 1 insignificant -0.0402221 0.38106 lowCoverage 1 lowCoverage 0.65914 0.79492 -0.136691 7 0.65422 0.78909 -0.1348714 0.99996 7.5579e-05 weaklyHypometh 1 0.018895 weaklyHypometh 0.99704 0.0076220 weaklyHypometh 1 1.00000 insignificant -0.087422 0.089237 insignificant 1 insignificant chr20 14384581 14385581 151744 ENSG00000199570 0.86175 196 5 0.81085 83 5 0.73095 54 5 0.82851 107 5 0.90000 40 5 0.77321 172 5 0.75676 92 5 0.69535 77 5 0.83095 45 5 0.84697 58 5 0.81279 89 5 0.70773 64 5 0.77928 72 5 NA 0 0 0.80003 91 5 0.95325 42 5 0.71832 58 5 0.89019 97 5 0.77679 94 5 0.82161 144 5 0.79000 37 5 0.64667 29 5 0.82773 107 5 0.70333 26 3 0.94286 17 2 0.79035 79 5 0.73308 47 4 0.96667 24 2 0.83209 51 5 0.83644 92 5 0.75883 94 5 0.75866 184 5 0.72060 83 5 0.62360 74 5 0.82121 79 5 0.82051 53 5 0.77833 31 5 0.56850 90 5 0.85202 170 5 0.80087 176 5 0.83693 101 5 0.83286 139 5 0.86314 167 5 0.86278 0.81709 0.73565 0.82895 0.90559 0.77590 0.75921 0.70097 0.83467 0.85389 0.81984 0.71046 0.78734 NA 0.81009 0.95495 0.72783 0.89073 0.77897 0.82699 0.80000 0.65781 0.82821 0.70932 0.94006 0.79434 0.74336 0.96503 0.82559 0.83748 0.77173 0.76457 0.73027 0.62643 0.82471 0.82260 0.77634 0.57468 0.85529 0.80510 0.84282 0.83278 0.86756 5 0.80657 0.78907 0.0168295 5 0.80386 0.78584 0.018020 0.27023 0.912006 insignificant 1 1 insignificant 0.82312 0.620332 insignificant 1 1 insignificant 0.0061231 0.84425 lowCoverage 1 lowCoverage 0.80657 0.70488 0.099212 5 0.80386 0.70757 0.096285 1.0362e-05 0.99924 weaklyHypermeth 0.0012953 1 weaklyHypermeth 0.0068269 0.99226 weaklyHypermeth 0.76121 1 insignificant 0.082888 0.11842 lowCoverage 1 lowCoverage 0.80657 0.83798 -0.0309314 5 0.80386 0.83531 -0.0314488 0.96741 0.225219 insignificant 1 1 insignificant 0.95616 0.252715 insignificant 1 1 insignificant -0.032148 0.10482 lowCoverage 1 lowCoverage 0.78907 0.70488 0.0822623 5 0.78584 0.70757 0.078266 3.4647e-03 0.99250 weaklyHypermeth 0.2038045 1 insignificant 0.0230676 0.99465 weaklyHypermeth 1.000000 1 insignificant 0.076765 0.164297 lowCoverage 1 lowCoverage 0.78907 0.83798 -0.0479548 5 0.78584 0.83531 -0.049469 0.98408 0.096932 insignificant 1 1 insignificant 0.84904 0.46066 insignificant 1 1 insignificant -0.0382711 0.20044 lowCoverage 1 lowCoverage 0.70488 0.83798 -0.130696 5 0.70757 0.83531 -0.1277342 0.99996 2.3146e-04 weaklyHypometh 1 0.038577 weaklyHypometh 0.99979 0.0028436 weaklyHypometh 1 0.71091 insignificant -0.115036 0.044137 weaklyHypometh 1 insignificant chr20 15344552 15345552 151873 ENSG00000222500 0.75114 212 8 0.75671 189 8 0.63765 171 8 0.62670 115 7 0.74878 76 6 0.68728 346 8 0.71548 158 7 0.74504 103 7 0.75497 105 7 0.80247 104 6 0.73378 233 7 0.66818 104 6 0.82605 132 7 NA 0 0 0.66665 135 7 0.70609 140 7 0.61873 93 7 0.68878 181 8 0.72381 120 7 0.74652 232 8 0.68220 76 6 0.69738 101 5 0.73745 211 8 0.69913 53 4 0.80303 50 5 0.75200 204 8 0.71259 139 8 0.88810 30 3 0.77204 120 7 0.75970 206 8 0.71207 234 8 0.74162 353 8 0.62523 226 8 0.67676 141 7 0.69578 164 8 0.78571 11 0 0.57060 76 6 0.66925 190 8 0.74563 228 8 0.72568 230 8 0.72100 173 8 0.81084 194 8 0.76465 198 8 0.70363 0.71677 0.58236 0.54715 0.67757 0.61807 0.64071 0.67488 0.70081 0.73619 0.65428 0.60758 0.76800 NA 0.60792 0.61666 0.52789 0.63172 0.69924 0.66008 0.58793 0.66578 0.63729 0.64926 0.68414 0.67237 0.65651 0.86013 0.66894 0.70097 0.67902 0.69530 0.55527 0.61681 0.60909 0.73333 0.50667 0.63509 0.64747 0.64992 0.64302 0.73206 0.68303 4 0.69108 0.69893 -0.0172054 8 0.71778 0.73616 -0.018378 0.96302 0.075209 insignificant 1 1 insignificant 0.98899 0.027428 weaklyHypometh 1 1 insignificant -0.0304006 0.15817 insignificant 1 insignificant 0.69108 0.63119 0.049540 8 0.71778 0.67096 0.046817 3.8353e-03 0.99754 weaklyHypermeth 0.2397086 1 insignificant 0.0088853 0.99050 weaklyHypermeth 0.88853 1 insignificant 0.045489 0.19970 insignificant 1 insignificant 0.69108 0.73509 -0.0294610 8 0.71778 0.75483 -0.0370492 0.95739 0.034998 weaklyHypometh 1 1 insignificant 0.92126 0.054564 insignificant 1 1 insignificant -0.037520 0.10204 insignificant 1 insignificant 0.69893 0.63119 0.0671764 8 0.73616 0.67096 0.065195 1.8537e-05 0.99982 weaklyHypermeth 0.0023171 1 weaklyHypermeth 0.0004033 0.99994 weaklyHypermeth 0.050412 1 weaklyHypermeth 0.075890 0.053421 insignificant 1 insignificant 0.69893 0.73509 -0.0096025 8 0.73616 0.75483 -0.018671 0.62250 0.309813 insignificant 1 1 insignificant 0.65559 0.66468 insignificant 1 1 insignificant -0.0071197 0.76315 insignificant 1 insignificant 0.63119 0.73509 -0.075805 8 0.67096 0.75483 -0.0838664 0.99999 6.9608e-05 weaklyHypometh 1 0.018895 weaklyHypometh 0.99998 0.0010714 weaklyHypometh 1 0.35712 insignificant -0.083009 0.040206 weaklyHypometh 1 insignificant chr20 15838360 15839360 151937 MACROD2 ENSG00000172264 0.77403 204 8 0.88426 61 5 0.66895 59 5 0.86044 207 8 1.00000 23 2 0.77057 246 9 0.65368 30 2 0.92817 63 5 1.00000 22 2 0.64667 47 5 0.73332 140 9 0.80556 17 1 0.76296 74 4 NA 0 0 0.70198 48 4 0.88889 12 0 0.83333 22 1 0.90859 212 8 0.79762 87 8 0.80490 142 9 0.77778 20 0 0.74062 84 8 0.79117 111 9 0.75000 22 0 0.96296 42 4 0.76025 156 9 0.83368 50 4 0.83333 20 2 0.73333 36 4 0.81197 157 8 0.67713 142 8 0.82072 321 9 0.88611 68 5 0.70103 80 4 0.79153 140 9 0.73438 40 4 0.72487 26 2 0.83125 130 8 0.84392 155 8 0.76211 225 8 0.82321 259 8 0.69236 145 4 0.84296 273 8 0.92002 0.92576 0.83424 0.97666 0.98830 0.87703 0.69642 0.95473 0.98830 0.83848 0.88522 0.98636 0.95758 NA 0.87937 0.98182 0.98182 0.96754 0.97857 0.89016 0.98182 0.75464 0.93005 0.95191 0.95556 0.94769 0.83365 0.99213 0.95636 0.93140 0.84879 0.95613 0.94000 0.83083 0.89513 0.84939 0.85368 0.95351 0.95550 0.92687 0.91227 0.93059 0.92942 1 0.85023 0.78898 0.0224131 8 0.79486 0.73988 0.054974 0.19314 0.993210 insignificant 1 1 insignificant 0.33187 0.779290 insignificant 1 1 insignificant 0.0207059 0.52254 lowCoverage 1 lowCoverage 0.85055 0.82645 0.019189 9 0.80910 0.79833 0.010773 2.0793e-02 0.83710 weaklyHypermeth 0.9901304 1 insignificant 0.0224968 0.86399 weaklyHypermeth 1.00000 1 insignificant 0.033592 0.39286 lowCoverage 1 lowCoverage 0.85055 0.86187 -0.0020111 8 0.80910 0.80343 0.0056754 0.45941 0.680243 insignificant 1 1 insignificant 0.17004 0.898481 insignificant 1 1 insignificant 0.018875 0.63065 lowCoverage 1 lowCoverage 0.79016 0.82645 -0.0025419 8 0.78506 0.79833 -0.013273 3.9051e-01 0.47749 insignificant 1.0000000 1 insignificant 0.1478015 0.72981 insignificant 1.000000 1 insignificant 0.012886 0.725134 insignificant 1 insignificant 0.79016 0.86187 -0.0248837 8 0.78506 0.80343 -0.018370 0.90677 0.222386 insignificant 1 1 insignificant 0.39067 0.90489 insignificant 1 1 insignificant -0.0018311 0.96039 insignificant 1 insignificant 0.82645 0.86187 -0.019860 8 0.79833 0.80343 -0.0050972 0.79678 1.3620e-01 insignificant 1 1.000000 insignificant 0.75377 0.2261736 insignificant 1 1.00000 insignificant -0.014717 0.729426 insignificant 1 insignificant chr20 17255961 17256961 152012 PCSK2 ENSG00000125851 0.783512 382 8 0.556438 147 8 0.540675 86 8 0.818281 303 8 0.830026 47 6 0.71468 338 8 0.566138 54 4 0.763627 133 8 0.425044 53 6 0.673406 64 6 0.799418 225 9 0.750000 14 0 0.782564 108 8 0.880952 42 3 0.809127 77 6 0.000000 5 0 0.533333 13 0 0.621564 463 8 0.878650 189 8 0.806115 293 9 0.717153 85 8 0.500588 132 8 0.539177 186 8 0.752640 98 7 0.807180 100 8 0.789166 248 8 0.638936 81 6 0.6250000 10 0 0.725968 155 8 0.719460 255 8 0.748824 233 8 0.767555 344 8 0.6995274 125 8 0.315769 227 7 0.7511161 157 7 0.686756 103 8 0.589552 107 6 0.5761635 298 8 0.6918508 234 8 0.520871 373 8 0.791933 319 9 0.484046 284 8 0.6512047 278 8 0.698835 0.455630 0.470861 0.736847 0.7475869 0.65532 0.569337 0.778087 0.4799442 0.778731 0.787371 0.518018 0.810481 0.838957 0.811851 0.507390 0.620310 0.654977 0.834847 0.815400 0.518753 0.487555 0.586984 0.674188 0.716936 0.747677 0.519364 0.452703 0.7174169 0.766366 0.787945 0.701302 0.7488292 0.3268831 0.5637307 0.72055985 0.7303165 0.6002760 0.600898 0.310438 0.859149 0.364684 0.6305463 3 0.741107 0.744029 0.0060800 8 0.613415 0.617820 -0.0044047 0.850693 0.8044750 insignificant 1 1.00000 insignificant 0.77584 0.8539450 insignificant 1 1 insignificant -0.01762625 0.7461214 insignificant 1 insignificant 0.741107 0.6076696 0.1373927 8 0.613415 0.4791398 0.1342752 1.2388e-06 1.0000e+00 weaklyHypermeth 3.7541e-05 1.0000e+00 weaklyHypermeth 1.2229e-01 9.7717e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0735303 3.6960e-01 insignificant 1.0000e+00 insignificant 0.741107 0.6471774 0.1315965 8 0.613415 0.5938738 0.0195411 3.5311e-04 9.9997e-01 weaklyHypermeth 9.8087e-03 1.0000e+00 weaklyHypermeth 6.3979e-02 9.8237e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0486964 5.1837e-01 insignificant 1.00000000 insignificant 0.744029 0.6076696 0.1275840 8 0.617820 0.4791398 0.1386799 8.0301e-05 9.9996e-01 weaklyHypermeth 2.0590e-03 1.0000e+00 weaklyHypermeth 2.0384e-01 0.96445311 insignificant 1.0000e+00 1.00000 insignificant 0.09115655 2.3179e-01 insignificant 1.0000e+00 insignificant 0.744029 0.6471774 0.1262752 8 0.617820 0.593874 0.0239459 1.6900e-03 1.0000e+00 weaklyHypermeth 4.4473e-02 1.0000e+00 weaklyHypermeth 6.7417e-02 9.9864e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0663227 3.3294e-01 insignificant 1.00000000 insignificant 0.6076696 0.6471774 0.0116810 8 0.4791398 0.593874 -0.114734 8.7794e-01 2.0725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4148e-01 7.9397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.024834 0.77701291 insignificant 1.000000 insignificant chr20 17983502 17984502 152024 PTMAP3 ENSG00000218902 0.447522 455 11 0.087094 485 11 0.252436 429 11 0.297355 411 10 0.177794 299 11 0.37753 782 11 0.242723 424 11 0.152782 488 11 0.144600 653 11 0.291839 658 11 0.327294 422 11 0.128503 591 11 0.074629 631 11 0.288366 379 9 0.121012 626 11 0.191739 353 11 0.100366 238 11 0.315761 490 10 0.067976 259 11 0.139382 575 11 0.274268 148 11 0.206462 361 11 0.274263 366 11 0.346373 189 11 0.278307 213 10 0.262297 625 11 0.202377 443 11 0.2259295 271 11 0.233609 298 11 0.092106 734 11 0.136897 565 11 0.181270 659 11 0.1548743 427 11 0.248379 197 10 0.1555629 589 10 0.246465 101 10 0.274694 271 11 0.0991689 514 11 0.4269009 506 10 0.456378 434 11 0.333212 412 10 0.358566 394 11 0.2883175 380 11 0.399284 0.066414 0.278282 0.309520 0.1567342 0.40165 0.240645 0.149114 0.1435320 0.299225 0.332380 0.122842 0.060600 0.246143 0.098212 0.164273 0.087508 0.280271 0.053077 0.123883 0.302067 0.220871 0.280382 0.275067 0.297502 0.275884 0.189477 0.234360 0.2012910 0.085858 0.120729 0.185586 0.1773078 0.2397231 0.1856493 0.18887027 0.3126643 0.0602002 0.429776 0.437480 0.320625 0.373815 0.2920886 10 0.214138 0.198686 0.0080189 11 0.211726 0.202221 0.0095058 0.255957 0.8630879 insignificant 1 1.00000 insignificant 0.92452 0.2486771 insignificant 1 1 insignificant -0.01484463 0.6407295 insignificant 1 insignificant 0.214138 0.1572177 0.0464450 11 0.211726 0.1608058 0.0509207 8.6055e-03 9.9100e-01 weaklyHypermeth 1.4107e-01 1.0000e+00 insignificant 3.7618e-02 9.1317e-01 weaklyHypermeth 7.2342e-01 1.0000000 insignificant 0.0148114 6.9883e-01 insignificant 1.0000e+00 insignificant 0.214138 0.3913452 -0.1739140 11 0.211726 0.3686901 -0.1569637 1.0000e+00 4.3384e-12 weaklyHypometh 1.0000e+00 4.3384e-09 weaklyHypometh 1.0000e+00 2.3591e-12 weaklyHypometh 1.0000e+00 2.3591e-09 weaklyHypometh -0.1613393 2.1644e-03 weaklyHypometh 0.14435622 insignificant 0.198686 0.1572177 0.0382129 11 0.202221 0.1608058 0.0414149 4.3144e-02 9.8446e-01 weaklyHypermeth 5.9102e-01 1.0000e+00 insignificant 2.3576e-02 0.97328007 weaklyHypermeth 4.7151e-01 1.00000 insignificant 0.02965601 4.1210e-01 insignificant 1.0000e+00 insignificant 0.198686 0.3913452 -0.1699369 11 0.202221 0.368690 -0.1664695 1.0000e+00 4.1358e-16 weaklyHypometh 1.0000e+00 4.1358e-13 weaklyHypometh 1.0000e+00 5.6189e-11 weaklyHypometh 1.0000e+00 5.6189e-08 weaklyHypometh -0.1464947 4.3662e-03 weaklyHypometh 0.31187435 insignificant 0.1572177 0.3913452 -0.2022255 11 0.1608058 0.368690 -0.207884 1.0000e+00 3.7600e-11 hypomethylated 1.0000e+00 4.7000e-09 hypomethylated 1.0000e+00 9.8178e-06 hypomethylated 1.0000e+00 1.2272e-03 hypomethylated -0.176151 0.00244319 weaklyHypometh 0.128589 insignificant chr20 18111677 18112677 152027 CSRP2BP ENSG00000149474 0.936345 322 5 0.899737 149 5 0.938039 132 5 0.961565 341 5 0.973333 80 5 0.92086 295 5 0.932551 137 5 0.933064 155 5 0.914724 142 5 0.949082 87 5 0.896678 165 5 0.956140 75 5 0.968788 254 5 0.966667 43 5 0.913623 179 5 1.000000 24 3 0.853439 61 5 0.952741 350 5 0.981818 102 5 0.946133 234 5 0.824675 48 5 0.960171 79 5 0.886356 138 5 0.976190 82 5 0.961905 77 5 0.942370 296 5 0.975000 72 5 0.7797203 64 5 0.929088 207 5 0.974886 312 5 0.953926 258 5 0.945153 261 5 0.9805824 252 5 0.982828 134 5 1.0000000 116 3 1.000000 18 0 0.957124 73 5 0.9742089 247 5 0.9722496 342 5 0.969114 281 5 0.978506 271 5 0.974801 360 5 0.9385201 372 5 0.945110 0.914756 0.939136 0.963654 0.9826518 0.93926 0.948566 0.942787 0.9245253 0.961703 0.907644 0.945999 0.961648 0.978315 0.935941 1.000000 0.844427 0.953788 0.977526 0.947839 0.855638 0.957541 0.909309 0.981413 0.952735 0.957419 0.983736 0.931552 0.9394175 0.973502 0.957132 0.953897 0.9802302 0.9852240 0.9930353 1.00000000 0.9587191 0.9769382 0.968487 0.973585 0.973537 0.977285 0.9456232 5 0.943493 0.951954 -0.0092355 5 0.947195 0.900080 0.0471151 0.914077 0.3078297 insignificant 1 1.00000 insignificant 0.89910 0.3883173 insignificant 1 1 insignificant 0.01397935 0.4921730 lowCoverage 1 lowCoverage 0.943476 0.9809524 -0.0386655 5 0.936634 0.9797048 -0.0430706 9.8291e-01 8.0660e-05 weaklyHypometh 1.0000e+00 8.0660e-03 weaklyHypometh 9.9143e-01 1.3114e-03 weaklyHypometh 1.0000e+00 0.1772217 insignificant -0.0426911 4.8534e-04 lowCoverage 3.1988e-02 lowCoverage 0.943476 0.9680197 -0.0234302 5 0.936634 0.9656144 -0.0289801 9.6237e-01 2.4142e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2888e-01 1.0174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0268720 2.2049e-02 lowCoverage 0.73498113 lowCoverage 0.952406 0.9809524 -0.0291480 5 0.946763 0.9797048 -0.0329420 9.8995e-01 6.1658e-03 weaklyHypometh 1.0000e+00 8.8083e-01 insignificant 9.8061e-01 0.00764398 weaklyHypometh 1.0000e+00 0.93201 insignificant -0.05667041 1.1867e-02 lowCoverage 4.2381e-01 lowCoverage 0.952406 0.9680197 -0.0144174 5 0.946763 0.965614 -0.0188516 9.2793e-01 1.7223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6180e-01 1.3463e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0408513 5.7467e-02 insignificant 1.00000000 insignificant 0.9809524 0.9680197 0.0142751 5 0.9797048 0.965614 0.014090 4.8945e-02 9.6126e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0960e-01 9.1827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.015819 0.14224489 lowCoverage 1.000000 lowCoverage chr20 20900133 20901133 152145 ENSG00000218888 0.945413 632 6 0.888256 739 6 0.883443 159 6 0.813797 423 4 0.894698 102 6 0.88221 559 6 0.910950 373 6 0.887260 181 6 0.916609 150 6 0.961567 106 6 0.943875 393 6 0.834194 102 6 0.943888 118 6 1.000000 26 3 0.954435 139 6 0.827367 85 6 0.746387 778 6 0.841170 585 4 0.948587 430 6 0.943308 541 6 0.860071 88 6 0.833333 6 0 0.909996 266 6 0.806787 108 4 0.875000 29 3 0.939589 500 6 0.876392 113 6 0.9771739 71 4 0.955736 541 6 0.904217 564 6 0.904371 704 6 0.951934 470 6 0.7636786 347 6 0.726356 185 6 0.0000000 40 1 0.833333 4 0 0.814085 263 6 0.8816727 577 6 0.9681795 773 6 0.930937 446 6 0.828970 652 5 0.837968 633 4 0.9425470 494 4 0.933180 0.888841 0.875661 0.944318 0.8984157 0.88116 0.896263 0.863645 0.9348893 0.945867 0.937868 0.886773 0.921626 0.992718 0.966234 0.815765 0.734748 0.895388 0.944804 0.954829 0.911304 0.971264 0.924794 0.917886 0.827586 0.939398 0.913388 0.976574 0.9635897 0.924658 0.946848 0.944275 0.7649011 0.7413707 NA 0.75923178 0.7678008 0.8495614 0.954900 0.943791 0.877713 0.841003 0.9187555 4 0.890047 0.937861 -0.0472543 6 0.895046 0.916535 -0.0214886 0.693490 0.0842803 insignificant 1 1.00000 insignificant 0.83259 0.0748202 insignificant 1 1 insignificant -0.00117941 0.9541360 lowCoverage 1 lowCoverage 0.890047 0.7930791 0.0948187 6 0.895046 0.7845095 0.1105366 4.5393e-08 9.9835e-01 weaklyHypermeth 1.6212e-06 1.0000e+00 weaklyHypermeth 6.3832e-06 9.9861e-01 weaklyHypermeth 3.9895e-04 1.0000000 weaklyHypermeth 0.2285163 1.5372e-01 lowCoverage 1.0000e+00 lowCoverage 0.890047 0.9186124 -0.0286679 6 0.895046 0.9107549 -0.0157087 4.0217e-01 5.3749e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3737e-01 3.9578e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0033496 9.1928e-01 insignificant 1.00000000 insignificant 0.937861 0.7930791 0.1365779 6 0.916535 0.7845095 0.1320252 2.1309e-09 9.9993e-01 weaklyHypermeth 9.6860e-08 1.0000e+00 weaklyHypermeth 1.4619e-05 0.99538420 weaklyHypermeth 8.1218e-04 1.00000 weaklyHypermeth 0.22969567 1.5210e-01 lowCoverage 1.0000e+00 lowCoverage 0.937861 0.9186124 0.0230956 6 0.916535 0.910755 0.0057799 1.2057e-01 6.2925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9446e-01 7.0208e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0021702 9.4836e-01 lowCoverage 1.00000000 lowCoverage 0.7930791 0.9186124 -0.1083886 6 0.7845095 0.910755 -0.126245 9.9764e-01 6.3275e-04 weaklyHypometh 1.0000e+00 2.6365e-02 weaklyHypometh 9.9992e-01 7.7781e-04 weaklyHypometh 1.0000e+00 5.1854e-02 weaklyHypometh -0.231866 0.15082641 lowCoverage 1.000000 lowCoverage chr20 21043198 21044198 152159 ENSG00000217629 0.838009 46 5 0.861082 320 5 0.896119 250 5 0.875000 12 0 0.831150 174 5 0.90921 55 5 0.897720 284 5 0.909873 248 5 0.774261 205 5 0.850910 212 5 0.850163 291 5 0.875417 138 5 0.940911 207 5 NA 0 0 0.912748 232 5 0.718398 85 5 0.738444 133 5 0.769524 27 4 0.933686 227 5 0.908278 62 5 0.871731 71 5 0.533333 11 0 0.819318 133 5 0.921004 66 4 0.600000 8 0 0.933145 328 5 0.869231 55 5 0.9833333 46 5 0.911904 335 5 0.928693 334 5 0.907932 313 5 0.939850 75 4 0.8557113 311 5 0.892845 223 5 0.8833333 52 4 1.000000 4 0 0.856532 52 5 0.9313945 219 5 0.9750000 33 4 0.950000 50 4 1.000000 12 0 1.000000 16 0 0.8000000 9 0 0.857143 0.866085 0.902631 0.911449 0.8325880 0.91167 0.904892 0.918564 0.7959523 0.877129 0.861588 0.889185 0.949230 NA 0.917369 0.748909 0.760334 0.795139 0.942838 0.913752 0.869050 0.520833 0.854680 0.912244 0.656250 0.938249 0.879407 0.980903 0.9231606 0.938330 0.917557 0.947055 0.8734959 0.9069123 0.9184028 0.96866582 0.8566087 0.9319572 0.973958 0.947917 1.000000 1.000000 0.8750000 0 0.874377 0.915493 -0.0393452 5 0.866898 0.909019 -0.0421207 0.999951 0.0029059 weaklyHypometh 1 0.72648 insignificant 0.96062 0.0683649 insignificant 1 1 insignificant 0.00579298 0.8950259 lowCoverage 1 lowCoverage 0.874377 0.9047619 -0.0289764 5 0.866898 0.8877193 -0.0208213 6.9526e-01 9.8412e-03 weaklyHypometh 1.0000e+00 5.7889e-01 insignificant 9.9289e-01 6.4727e-03 weaklyHypometh 1.0000e+00 0.5393889 insignificant -0.0458869 1.2015e-01 lowCoverage 1.0000e+00 lowCoverage 0.874377 0.9750000 -0.1013036 3 0.866898 0.9659105 -0.0990125 9.9995e-01 2.3654e-07 lowCoverage 1.0000e+00 1.1827e-04 lowCoverage 1.0000e+00 2.6604e-07 lowCoverage 1.0000e+00 1.3302e-04 lowCoverage -0.0875842 7.8217e-02 lowCoverage 1.00000000 lowCoverage 0.915493 0.9047619 0.0099084 5 0.909019 0.8877193 0.0212993 7.6959e-02 5.4783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3985e-01 0.13938063 insignificant 1.0000e+00 1.00000 insignificant -0.05167986 2.8060e-01 lowCoverage 1.0000e+00 lowCoverage 0.915493 0.9750000 -0.0616500 3 0.909019 0.965910 -0.0568919 9.8567e-01 4.2374e-03 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.0000e+00 1.7534e-05 lowCoverage 1.0000e+00 5.8447e-03 lowCoverage -0.0933772 1.1466e-01 lowCoverage 1.00000000 lowCoverage 0.9047619 0.9750000 -0.0682792 3 0.8877193 0.965910 -0.078191 9.9744e-01 1.3028e-05 lowCoverage 1.0000e+00 1.0021e-03 lowCoverage 9.9999e-01 1.0155e-03 lowCoverage 1.0000e+00 5.9736e-02 lowCoverage -0.041697 0.37239353 lowCoverage 1.000000 lowCoverage chr20 21377416 21378416 152191 ENSG00000209268,ENSG00000223128 0.669481 78 5 0.604520 119 5 0.438889 35 3 0.616787 74 5 0.663095 31 2 0.55708 82 5 0.666667 34 4 0.751515 51 5 0.500000 10 0 0.700000 26 3 0.736371 96 5 0.800000 10 0 0.573333 30 5 0.760606 40 5 0.633333 30 5 0.666667 21 2 NA 0 0 0.568027 61 7 0.715986 29 2 0.752834 43 5 0.650000 21 1 0.500000 4 0 0.609524 36 2 0.671627 36 5 0.450054 66 5 0.691249 86 5 0.724762 30 5 0.7333333 11 0 0.657143 50 5 0.652613 92 5 0.621111 93 5 0.745833 45 5 0.6000886 84 5 0.449899 50 5 0.6622222 63 5 1.000000 2 0 0.441515 60 5 0.5192308 52 5 0.6768939 80 5 0.585357 83 5 0.579115 115 5 0.676190 37 2 0.6205952 75 5 0.715320 0.672742 0.435606 0.669960 0.7394308 0.74545 0.712121 0.800275 0.7272727 0.795455 0.722806 0.818182 0.678788 0.803719 0.719697 0.863636 NA 0.587446 0.707251 0.738095 0.715909 0.695625 0.698052 0.697240 0.709501 0.741508 0.749567 0.696970 0.7337662 0.686441 0.670960 0.755682 0.6348856 0.4902204 0.7267677 0.78408349 0.5434573 0.6975524 0.627686 0.676428 0.675049 0.743506 0.6702922 0 0.666295 0.675439 -0.0085355 5 0.648053 0.590917 0.0571362 0.285689 0.6345306 insignificant 1 1.00000 insignificant 0.51332 0.9374562 insignificant 1 1 insignificant 0.00905534 0.7911311 lowCoverage 1 lowCoverage 0.668934 0.5691318 0.0957690 5 0.666525 0.4662694 0.2002553 1.9289e-04 9.9963e-01 weaklyHypermeth 4.0186e-03 1.0000e+00 weaklyHypermeth 1.9469e-02 9.9860e-01 weaklyHypermeth 4.2324e-01 1.0000000 insignificant 0.0391668 6.7216e-01 lowCoverage 1.0000e+00 lowCoverage 0.667413 0.6384615 0.0385212 5 0.687394 0.6397466 0.0476470 3.5197e-01 9.3431e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9617e-01 9.2785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0236958 4.4918e-01 lowCoverage 1.00000000 lowCoverage 0.675485 0.5691318 0.1042107 5 0.553043 0.4662694 0.0867732 2.8985e-03 9.9991e-01 weaklyHypermeth 5.5741e-02 1.0000e+00 weaklyHypermeth 9.1366e-02 0.99794632 insignificant 1.0000e+00 1.00000 insignificant 0.03011149 7.4653e-01 lowCoverage 1.0000e+00 lowCoverage 0.674868 0.6384615 0.0397592 5 0.539782 0.639747 -0.0999646 2.6761e-01 7.5728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0831e-01 6.6281e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0146405 6.6814e-01 lowCoverage 1.00000000 lowCoverage 0.5691318 0.6382429 -0.0654191 5 0.4662694 0.602995 -0.136726 9.0583e-01 1.8918e-02 weaklyHypometh 1.0000e+00 4.5187e-01 insignificant 9.3934e-01 6.0949e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.015471 0.86613092 lowCoverage 1.000000 lowCoverage chr20 25027505 25028505 152285 ENSG00000214444 0.874446 253 6 0.767407 87 5 0.702586 95 6 0.842865 128 6 0.651984 57 6 0.80788 190 6 0.711927 104 6 0.697835 87 6 0.591449 62 4 0.789636 102 6 0.842972 166 6 0.756313 76 6 0.812858 77 6 0.928571 14 1 0.851337 92 6 0.699270 73 6 0.723710 55 6 0.808580 128 6 0.808120 91 6 0.848104 210 6 0.875000 21 3 0.891534 57 6 0.873718 109 6 0.906250 49 3 0.811741 45 4 0.781934 97 6 0.757136 72 3 0.9666667 48 3 0.733466 83 6 0.796423 130 6 0.792555 100 6 0.814194 325 6 0.8351827 75 4 0.775072 94 6 0.7867406 101 6 0.883246 62 6 0.861305 60 3 0.6775512 103 6 0.8596284 264 6 0.868196 222 6 0.816670 173 6 0.815735 204 6 0.8561891 227 6 0.906876 0.766734 0.688987 0.869523 0.7402494 0.85397 0.727160 0.766765 0.6139451 0.866683 0.867437 0.771044 0.856571 NA 0.894466 0.770597 0.796501 0.785854 0.868982 0.845606 0.885089 0.890485 0.882131 0.869268 0.833193 0.848794 0.780063 0.957672 0.7912866 0.822976 0.846432 0.826047 0.8522230 0.7685071 0.8051972 0.86846764 0.8549355 0.7245213 0.882192 0.887505 0.827440 0.853577 0.8804110 3 0.814625 0.834507 -0.0229932 6 0.791583 0.819632 -0.0280495 0.972664 0.1291787 insignificant 1 1.00000 insignificant 0.99810 0.0157143 weaklyHypometh 1 1 insignificant -0.05749242 0.0441677 lowCoverage 1 lowCoverage 0.814625 0.7939394 0.0176758 6 0.791583 0.7867060 0.0048770 4.2740e-01 5.3707e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0766e-01 1.1522e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0272906 4.6283e-01 insignificant 1.0000e+00 insignificant 0.814625 0.8605505 -0.0503646 6 0.791583 0.8455120 -0.0539290 9.9745e-01 4.8878e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9836e-01 3.4496e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0673914 5.2735e-03 weaklyHypometh 0.23545105 insignificant 0.834507 0.7939394 0.0395629 6 0.819632 0.7867060 0.0329265 3.0147e-02 8.7547e-01 weaklyHypermeth 4.2460e-01 1.0000e+00 insignificant 7.5755e-02 0.94639120 insignificant 1.0000e+00 1.00000 insignificant 0.03020183 4.2585e-01 lowCoverage 1.0000e+00 lowCoverage 0.834507 0.8605505 -0.0273949 6 0.819632 0.845512 -0.0258795 9.7173e-01 1.2156e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1397e-01 5.9666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0098989 6.7071e-01 lowCoverage 1.00000000 lowCoverage 0.7939394 0.8605505 -0.0675153 6 0.7867060 0.845512 -0.058806 9.3084e-01 7.6867e-03 weaklyHypometh 1.0000e+00 2.0775e-01 insignificant 7.5568e-01 4.8800e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.040101 0.25950840 insignificant 1.000000 insignificant chr20 29547846 29548846 152332 REM1 ENSG00000088320 0.788344 171 5 0.690223 164 6 0.608429 252 6 0.784547 128 3 0.850608 140 6 0.74643 227 5 0.726038 170 6 0.671198 109 6 0.646372 190 6 0.766194 173 6 0.877823 172 6 0.646414 180 6 0.577769 190 6 0.770468 53 3 0.782517 181 6 0.669780 90 4 0.528910 85 6 0.567622 159 3 0.746693 93 6 0.746373 165 6 0.813104 75 6 0.625144 114 3 0.806631 234 6 0.767547 80 5 0.847013 72 3 0.744711 156 5 0.587561 141 6 0.7477954 102 6 0.652804 171 6 0.558442 172 5 0.559028 182 6 0.797360 323 6 0.0088889 244 6 0.000000 139 6 0.0095238 156 5 0.000000 51 5 0.028446 119 6 0.0045045 162 6 0.7749035 194 5 0.768018 216 6 0.580534 153 5 0.778183 142 5 0.7860450 165 5 0.692189 0.645069 0.540258 0.795938 0.8226195 0.71573 0.669419 0.642389 0.5953677 0.729876 0.881751 0.526093 0.500965 0.768519 0.722837 0.472933 0.469666 0.589121 0.667629 0.704922 0.825557 0.503545 0.733942 0.680551 0.737469 0.704659 0.578665 0.658928 0.6392510 0.524838 0.513448 0.733816 0.0078607 0.0000000 0.0136816 0.00000000 0.0269356 0.0077652 0.661609 0.704273 0.578039 0.728609 0.7191879 3 0.700517 0.670143 0.0267607 6 0.718697 0.698234 0.0204636 0.105625 0.8025332 insignificant 1 1.00000 insignificant 0.51118 0.5970669 insignificant 1 1 insignificant 0.00070934 0.9849395 insignificant 1 insignificant 0.700517 0.0091848 0.6976112 6 0.718697 0.0100666 0.7086306 5.9576e-62 1.0000e+00 hypermethylated 5.9576e-59 1.0000e+00 hypermethylated 3.3542e-16 1.0000e+00 hypermethylated 6.7084e-14 1.0000000 hypermethylated 0.7010773 3.8180e-19 hypermethylated 3.8180e-16 hypermethylated 0.700517 0.6908046 -0.0179873 5 0.718697 0.7666735 -0.0479763 9.2065e-01 4.0285e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.4250e-01 9.0565e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0278988 5.5322e-01 insignificant 1.00000000 insignificant 0.670143 0.0091848 0.6644631 6 0.698234 0.0100666 0.6881670 5.5562e-45 1.0000e+00 hypermethylated 5.5562e-42 1.0000e+00 hypermethylated 9.8249e-15 1.00000000 hypermethylated 2.4562e-12 1.00000 hypermethylated 0.70036800 7.3305e-11 hypermethylated 7.3305e-08 hypermethylated 0.670143 0.6908046 -0.0411332 5 0.698234 0.766674 -0.0684398 9.7761e-01 5.1193e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4029e-01 2.1275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0286082 5.7996e-01 insignificant 1.00000000 insignificant 0.0091848 0.6908046 -0.6966855 5 0.0100666 0.766674 -0.756607 1.0000e+00 5.2527e-41 hypomethylated 1.0000e+00 5.2527e-38 hypomethylated 1.0000e+00 5.5650e-10 hypomethylated 1.0000e+00 2.7825e-07 hypomethylated -0.728976 0.00004291 hypomethylated 0.013657 hypomethylated chr20 30524672 30525672 152386 ASXL1 ENSG00000171456 0.712195 812 17 0.676627 651 18 0.911651 401 18 0.805312 669 18 0.856429 207 14 0.72716 881 18 0.770478 299 19 0.773357 497 17 0.833249 354 15 0.843824 351 15 0.795869 578 18 0.917776 193 15 0.933265 402 16 0.894108 277 16 0.889537 336 15 0.666667 33 3 0.581250 28 3 0.741281 1348 17 0.930988 552 17 0.749433 633 18 0.786075 275 17 0.524342 333 16 0.878890 380 18 0.655350 185 11 0.711397 421 16 0.788448 573 18 0.790910 454 18 0.7897003 183 17 0.909268 630 17 0.922574 741 17 0.877649 655 18 0.864096 1058 18 0.7609570 503 18 0.737457 358 17 0.7272727 509 10 0.808824 217 10 0.821716 286 15 0.8212731 603 17 0.5059062 698 14 0.407150 569 14 0.634598 487 17 0.661455 682 14 0.5890032 485 14 0.815861 0.631963 0.870368 0.767296 0.8173950 0.76706 0.852845 0.880589 0.8508443 0.845797 0.879977 0.875947 0.901459 0.816655 0.825900 0.654979 0.599697 0.657454 0.915055 0.833477 0.779955 0.464726 0.845144 0.599455 0.719365 0.815241 0.737073 0.760907 0.8610547 0.876010 0.878874 0.878074 0.7329584 0.7055445 0.7090816 0.85073435 0.7722972 0.8291372 0.438253 0.370092 0.534647 0.528564 0.5669470 7 0.803348 0.811449 0.0046053 18 0.786671 0.754301 0.0323698 0.518395 0.9630129 insignificant 1 1.00000 insignificant 0.17148 0.9993915 insignificant 1 1 insignificant 0.00896421 0.8253449 insignificant 1 insignificant 0.802806 0.8101777 0.0220793 17 0.786669 0.7602330 0.0264363 4.2991e-04 3.5904e-03 weaklyHypermeth 8.4296e-03 2.5645e-01 weaklyHypermeth 1.2465e-02 3.9696e-02 weaklyHypermeth 3.1163e-01 1.0000000 insignificant 0.0209392 4.6671e-01 insignificant 1.0000e+00 insignificant 0.803256 0.4166381 0.3317405 14 0.810529 0.5778825 0.2326466 4.0173e-48 9.9368e-01 hypermethylated 4.0173e-45 1.0000e+00 hypermethylated 2.4587e-22 9.9657e-01 hypermethylated 2.4587e-19 1.0000e+00 hypermethylated 0.2409001 3.4172e-03 weaklyHypermeth 0.18984552 insignificant 0.810635 0.8101777 0.0182114 17 0.751322 0.7602330 -0.0089112 2.0102e-01 3.2064e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 5.9517e-01 0.00249360 inconclusive 1.0000e+00 0.49872 insignificant 0.01197502 7.5550e-01 insignificant 1.0000e+00 insignificant 0.810913 0.4166381 0.3234624 14 0.790865 0.577882 0.2129826 4.5256e-24 9.9974e-01 hypermethylated 4.5256e-21 1.0000e+00 hypermethylated 1.0968e-13 9.7618e-01 hypermethylated 1.0968e-10 1.0000e+00 hypermethylated 0.2319359 3.2795e-03 weaklyHypermeth 0.25227258 insignificant 0.8105051 0.4166381 0.2560561 14 0.8002453 0.577882 0.222363 1.1529e-18 9.9998e-01 hypermethylated 1.1529e-15 1.0000e+00 hypermethylated 1.7865e-07 1.0000e+00 hypermethylated 4.4664e-05 1.0000e+00 hypermethylated 0.219961 0.00634492 weaklyHypermeth 0.288405 insignificant chr20 30526289 30527289 152387 ASXL1 ENSG00000171456 0.235131 250 11 0.245585 608 13 0.380734 535 13 0.427482 236 10 0.281162 352 11 0.39655 429 11 0.278064 489 11 0.260506 367 11 0.277507 485 11 0.392628 388 11 0.320593 575 11 0.302499 453 11 0.224494 451 11 0.539133 175 7 0.208870 405 11 0.291068 333 10 0.085140 305 6 0.355838 261 7 0.264154 592 11 0.390256 343 11 0.428237 260 11 0.191052 203 7 0.309234 234 12 0.320362 251 11 0.374741 141 7 0.273377 584 13 0.229587 325 11 0.1584113 254 11 0.318256 453 11 0.296739 725 13 0.330384 609 13 0.433617 626 11 0.0055622 522 13 0.015152 264 11 0.0725806 338 13 0.000000 55 3 0.063002 443 11 0.0058900 636 13 0.2288007 335 11 0.123650 346 12 0.260388 204 8 0.087957 163 10 0.3349923 227 8 0.309978 0.208666 0.327939 0.324608 0.3088562 0.44135 0.317779 0.298446 0.2726600 0.317548 0.328581 0.330801 0.217375 0.351252 0.239368 0.269393 0.207951 0.262388 0.281990 0.265002 0.374139 0.120102 0.317145 0.357273 0.371101 0.249454 0.247743 0.184179 0.3189128 0.271757 0.262919 0.345945 0.0096496 0.0155525 0.0052790 0.00000000 0.0264774 0.0138158 0.128045 0.097535 0.190400 0.073175 0.2242646 8 0.287102 0.295026 0.0095149 11 0.401267 0.355859 0.0454085 0.189878 0.7443371 insignificant 1 1.00000 insignificant 0.43331 0.7887965 insignificant 1 1 insignificant 0.00253654 0.9388189 insignificant 1 insignificant 0.286924 0.0119575 0.2918940 11 0.358501 0.0360575 0.3224432 1.7741e-50 1.0000e+00 hypermethylated 8.8703e-48 1.0000e+00 hypermethylated 9.3794e-25 1.0000e+00 hypermethylated 9.3794e-22 1.0000000 hypermethylated 0.2808385 8.4785e-11 hypermethylated 2.1196e-08 hypermethylated 0.286924 0.1513725 0.1730287 11 0.358501 0.2293591 0.1291416 4.0805e-12 9.9982e-01 weaklyHypermeth 2.7203e-10 1.0000e+00 weaklyHypermeth 1.8263e-08 9.9948e-01 weaklyHypermeth 2.1961e-06 1.0000e+00 weaklyHypermeth 0.1007122 9.1345e-02 insignificant 1.00000000 insignificant 0.294938 0.0119575 0.2959514 11 0.345563 0.0360575 0.3095055 2.3610e-40 1.0000e+00 hypermethylated 1.1805e-37 1.0000e+00 hypermethylated 3.4324e-23 1.00000000 hypermethylated 3.4324e-20 1.00000 hypermethylated 0.27830198 3.6883e-08 hypermethylated 1.2294e-05 hypermethylated 0.294938 0.1513725 0.1709108 11 0.345563 0.229359 0.1162039 1.8304e-09 9.9101e-01 weaklyHypermeth 1.4080e-07 1.0000e+00 weaklyHypermeth 8.1927e-06 9.9538e-01 weaklyHypermeth 6.8272e-04 1.0000e+00 weaklyHypermeth 0.0981757 1.0093e-01 insignificant 1.00000000 insignificant 0.0119575 0.1513725 -0.1419980 11 0.0360575 0.229359 -0.193302 1.0000e+00 7.7178e-14 weaklyHypometh 1.0000e+00 1.5436e-11 weaklyHypometh 1.0000e+00 2.2879e-10 weaklyHypometh 1.0000e+00 2.2879e-07 weaklyHypometh -0.180126 0.01392248 weaklyHypometh 0.526365 insignificant chr20 30526590 30527590 152388 ASXL1 ENSG00000171456 0.168724 259 10 0.192925 531 10 0.200330 537 10 0.316024 280 9 0.205819 384 10 0.31925 384 10 0.216044 523 10 0.139286 373 10 0.172613 556 10 0.130409 413 10 0.211866 595 10 0.248376 499 10 0.080249 466 10 0.261372 200 6 0.150178 502 10 0.310056 411 10 0.085140 305 6 0.187379 332 6 0.160027 572 10 0.177296 328 10 0.303234 254 10 0.201852 176 5 0.230669 246 10 0.191665 271 10 0.290501 126 6 0.111811 623 10 0.239966 339 10 0.1320543 255 10 0.199088 450 10 0.151755 765 10 0.168049 624 10 0.318028 629 10 0.0095107 397 10 0.000000 276 10 0.0016129 377 10 0.000000 48 3 0.016035 334 10 0.0057143 539 10 0.1086519 442 10 0.061915 358 10 0.113545 270 7 0.059573 220 9 0.3604974 245 7 0.223322 0.186377 0.209290 0.186014 0.2124640 0.37135 0.232004 0.168918 0.1771424 0.159394 0.220584 0.245466 0.070214 0.232538 0.162202 0.258493 0.114274 0.177974 0.149366 0.151516 0.252226 0.096981 0.221511 0.209558 0.270561 0.118668 0.227181 0.134586 0.2094417 0.136727 0.154392 0.224733 0.0106730 0.0000000 0.0049742 0.00102362 0.0158796 0.0113236 0.064550 0.051312 0.091452 0.038701 0.1968912 7 0.205444 0.184227 0.0150731 10 0.190465 0.176771 0.0136938 0.116555 0.7182956 insignificant 1 1.00000 insignificant 0.42075 0.3899627 insignificant 1 1 insignificant -0.01488808 0.5519463 insignificant 1 insignificant 0.205444 0.0065956 0.1939921 10 0.190465 0.0056183 0.1848463 3.3360e-33 1.0000e+00 weaklyHypermeth 4.7658e-31 1.0000e+00 weaklyHypermeth 4.5193e-22 1.0000e+00 weaklyHypermeth 2.2596e-19 1.0000000 weaklyHypermeth 0.1911892 8.0509e-11 weaklyHypermeth 2.1196e-08 weaklyHypermeth 0.205444 0.0931596 0.1134753 10 0.190465 0.1115752 0.0788894 8.4603e-07 9.9983e-01 weaklyHypermeth 3.8456e-05 1.0000e+00 weaklyHypermeth 8.5227e-07 9.9927e-01 weaklyHypermeth 7.1023e-05 1.0000e+00 weaklyHypermeth 0.0558316 3.8428e-01 insignificant 1.00000000 insignificant 0.184227 0.0065956 0.1790578 10 0.176771 0.0056183 0.1711525 2.4035e-24 1.0000e+00 weaklyHypermeth 3.4336e-22 1.0000e+00 weaklyHypermeth 2.1653e-19 1.00000000 weaklyHypermeth 1.0827e-16 1.00000 weaklyHypermeth 0.20607733 3.1998e-07 hypermethylated 5.3330e-05 hypermethylated 0.184227 0.0931596 0.0981964 10 0.176771 0.111575 0.0651956 1.0408e-04 9.7304e-01 weaklyHypermeth 3.4694e-03 1.0000e+00 weaklyHypermeth 3.6435e-05 9.8438e-01 weaklyHypermeth 2.6025e-03 1.0000e+00 weaklyHypermeth 0.0707196 2.8680e-01 insignificant 1.00000000 insignificant 0.0065956 0.0931596 -0.0849517 10 0.0056183 0.111575 -0.105957 1.0000e+00 4.1355e-09 weaklyHypometh 1.0000e+00 4.5950e-07 weaklyHypometh 1.0000e+00 2.0693e-08 weaklyHypometh 1.0000e+00 6.8976e-06 weaklyHypometh -0.135358 0.07314229 insignificant 1.000000 insignificant chr20 30533036 30534036 152391 ASXL1 ENSG00000171456 0.260762 106 2 0.271130 138 5 0.228490 150 6 0.139937 84 2 0.265422 114 5 0.45327 125 3 0.103002 119 5 0.153176 135 5 0.103436 96 4 0.233333 86 5 0.203926 111 5 0.073452 93 5 0.074084 105 3 0.041667 19 3 0.131944 100 5 0.070588 39 4 0.086636 81 2 0.111068 74 2 0.091038 68 2 0.217682 109 2 0.380383 61 5 0.227982 62 2 0.351261 115 5 0.235498 84 5 0.142857 30 1 0.307473 219 5 0.189351 194 5 0.2458333 37 5 0.120232 92 2 0.167808 190 5 0.313056 169 5 0.198004 218 5 0.2319136 109 5 0.187393 110 5 0.0666667 53 1 0.189103 40 2 0.292336 60 5 0.1559351 174 5 0.1321107 127 5 0.078631 110 5 0.051515 71 2 0.052892 104 2 0.0775418 93 5 0.354154 0.385729 0.470455 0.348341 0.3476097 0.50376 0.302199 0.344602 0.2561706 0.382069 0.456740 0.172727 0.176189 0.317991 0.297126 0.197160 0.109980 0.339485 0.216167 0.281764 0.538459 0.216529 0.538198 0.442508 0.318555 0.520219 0.462721 0.633103 0.3225253 0.392842 0.374276 0.513673 0.4840920 0.5505040 0.4746336 0.49104775 0.5222244 0.4954280 0.211193 0.221570 0.103657 0.137049 0.2338038 2 0.264344 0.336506 -0.1029003 5 0.260354 0.216957 0.0433968 0.760501 0.0088535 weaklyHypometh 1 0.94739 insignificant 0.97927 0.0090617 weaklyHypometh 1 1 insignificant -0.07427582 0.0318125 lowCoverage 1 lowCoverage 0.263725 0.4065934 -0.1635631 5 0.202310 0.2761313 -0.0738218 3.0849e-02 3.0506e-08 weaklyHypometh 4.3449e-01 6.1012e-06 weaklyHypometh 3.1639e-01 1.8625e-03 weaklyHypometh 1.0000e+00 0.1862461 insignificant -0.0215221 5.8413e-01 lowCoverage 1.0000e+00 lowCoverage 0.264344 0.1564356 0.1284376 5 0.260354 0.0772612 0.1830930 2.2444e-03 9.9894e-01 weaklyHypermeth 5.7549e-02 1.0000e+00 weaklyHypermeth 4.1623e-02 9.9977e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0871642 3.8109e-03 lowCoverage 0.20057595 lowCoverage 0.337423 0.4065934 -0.0623667 5 0.247951 0.2761313 -0.0281800 1.0306e-02 3.6522e-04 weaklyHypometh 1.7176e-01 6.0870e-02 weaklyHypometh 8.7424e-02 0.03772848 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.05275370 2.0371e-01 lowCoverage 1.0000e+00 lowCoverage 0.336506 0.1564356 0.2496661 5 0.216957 0.077261 0.1396962 1.1697e-05 9.9990e-01 hypermethylated 4.3321e-04 1.0000e+00 hypermethylated 3.8304e-04 1.0000e+00 hypermethylated 1.9152e-02 1.0000e+00 hypermethylated 0.1614400 3.7524e-05 lowCoverage 0.00625395 lowCoverage 0.4065934 0.1567460 0.2991162 5 0.2761313 0.088299 0.187833 3.5325e-04 7.9796e-01 hypermethylated 2.9437e-02 1.0000e+00 hypermethylated 3.3308e-02 9.0608e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.108686 0.01526459 lowCoverage 0.526365 lowCoverage chr20 30548097 30549097 152392 C20orf112 ENSG00000197183 0.840000 35 5 0.777389 40 5 0.872727 31 2 0.903083 114 5 0.597222 43 5 0.84620 56 4 0.946429 21 2 0.938235 39 2 0.692460 26 2 0.583333 23 2 0.766667 110 5 0.388889 6 0 0.690756 34 2 0.772228 33 2 0.895623 21 2 0.000000 2 0 NA 0 0 0.869444 29 2 1.000000 9 0 0.690476 23 2 0.950000 19 2 1.000000 5 0 1.000000 8 0 0.533333 15 2 0.946957 119 5 0.888571 43 5 0.876737 60 5 0.3611111 9 0 0.824074 30 2 0.898286 73 5 0.885498 89 5 0.840816 96 5 0.9044444 50 4 0.950000 110 5 0.8000000 87 5 1.000000 19 2 0.763636 44 4 0.8657197 90 4 0.6200000 25 3 0.734575 93 5 0.521569 52 5 0.000000 3 0 0.8000000 52 5 0.981818 0.820979 0.698347 0.959091 0.8674242 0.98930 0.872565 0.856952 0.7099567 0.761364 0.903182 0.600574 0.732238 0.713287 0.847567 0.427038 NA 0.888636 1.000000 0.743182 0.880682 0.992559 1.000000 0.581818 0.970356 0.827922 0.814325 0.314529 0.8825758 0.961818 0.885331 0.964502 0.8686869 0.9595960 1.0000000 1.00000000 0.7455234 0.7127238 0.981818 0.821285 0.950535 0.905188 1.0000000 0 0.829480 0.901060 -0.0669448 3 0.826501 0.875719 -0.0492178 0.998990 0.0495622 lowCoverage 1 1.00000 lowCoverage 0.99756 0.1614591 lowCoverage 1 1 lowCoverage -0.09319438 0.2377376 lowCoverage 1 lowCoverage 0.834328 0.8525000 -0.0174216 3 0.827102 0.8304006 -0.0032989 4.9620e-01 2.6037e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9273e-01 4.5623e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.1400459 4.2136e-02 lowCoverage 1.0000e+00 lowCoverage 0.828986 0.7111111 0.0724493 3 0.797585 0.7314277 0.0661569 3.0053e-04 5.5694e-01 lowCoverage 8.8392e-03 1.0000e+00 lowCoverage 2.2153e-03 1.9380e-01 lowCoverage 7.1462e-02 1.0000e+00 lowCoverage 0.2053589 2.3211e-01 lowCoverage 1.00000000 lowCoverage 0.903226 0.8525000 0.0578496 5 0.906007 0.8304006 0.0756060 9.4884e-02 4.4755e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6187e-01 0.23007310 insignificant 1.0000e+00 1.00000 insignificant -0.04685151 4.9106e-01 lowCoverage 1.0000e+00 lowCoverage 0.900533 0.7111111 0.1669008 5 0.855005 0.731428 0.1235777 4.8138e-07 8.5446e-01 weaklyHypermeth 2.1881e-05 1.0000e+00 weaklyHypermeth 2.4723e-03 5.7739e-01 weaklyHypermeth 8.8298e-02 1.0000e+00 weaklyHypermeth 0.2985533 1.0472e-01 lowCoverage 1.00000000 lowCoverage 0.8525000 0.7098214 0.1269523 5 0.8304006 0.677713 0.152687 2.1785e-04 7.6316e-01 weaklyHypermeth 1.9805e-02 1.0000e+00 weaklyHypermeth 4.5960e-03 8.5905e-01 weaklyHypermeth 5.4140e-01 1.0000e+00 insignificant 0.345405 0.07052354 lowCoverage 1.000000 lowCoverage chr20 30589423 30590423 152398 C20orf112 ENSG00000197183 0.434921 48 3 0.139899 65 4 0.186144 90 6 0.140287 79 4 0.085201 51 3 0.37817 93 4 0.213459 82 6 0.244017 68 5 0.138422 90 6 0.263245 76 5 0.140085 109 6 0.318780 76 6 0.142890 113 6 NA 0 0 0.140167 104 6 0.081145 59 4 0.103716 99 5 0.287751 49 4 0.241235 77 6 0.289731 76 3 0.406798 53 5 0.345163 61 4 0.254372 122 6 0.311111 37 4 0.509503 55 3 0.204421 137 6 0.342132 59 4 0.1138889 34 2 0.169530 63 5 0.201917 126 6 0.160542 131 6 0.318394 155 6 0.2946025 72 3 0.329125 61 4 0.1666667 15 1 0.655934 57 3 0.414983 44 3 0.5445527 78 5 0.6174825 76 4 0.196881 97 5 0.161477 60 4 0.219692 113 4 0.3575783 104 4 0.352552 0.155800 0.129317 0.135919 0.0313924 0.28559 0.188943 0.273310 0.0933848 0.230247 0.259197 0.204040 0.170314 NA 0.207995 0.035131 0.082583 0.307758 0.270975 0.189726 0.271863 0.222333 0.249179 0.364478 0.363829 0.225501 0.362833 0.102694 0.2161675 0.225361 0.137100 0.294496 0.3305583 0.2607897 NA 0.46354964 0.4465871 0.7583847 0.407467 0.186641 0.071632 0.225662 0.2080326 1 0.190824 0.260407 -0.0594763 6 0.197713 0.257979 -0.0602667 0.972047 0.0019631 weaklyHypometh 1 0.65438 insignificant 0.99379 0.0192704 weaklyHypometh 1 1 insignificant -0.06923866 0.1014321 lowCoverage 1 lowCoverage 0.190824 0.4250765 -0.2332407 4 0.197713 0.4375715 -0.2398587 5.1801e-01 1.8418e-13 lowCoverage 1.0000e+00 1.8418e-10 lowCoverage 5.3019e-01 1.4314e-05 lowCoverage 1.0000e+00 0.0087207 lowCoverage -0.1920684 4.4475e-02 lowCoverage 1.0000e+00 lowCoverage 0.190824 0.2844444 -0.0515961 4 0.197713 0.3136669 -0.1159542 9.8077e-01 3.1539e-03 lowCoverage 1.0000e+00 5.2564e-01 lowCoverage 9.3961e-01 1.8192e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1017132 2.9772e-01 lowCoverage 1.00000000 lowCoverage 0.260407 0.4250765 -0.1722434 4 0.257979 0.4375715 -0.1795920 2.5858e-01 8.8557e-08 lowCoverage 1.0000e+00 5.3134e-05 lowCoverage 3.7705e-01 0.00198558 lowCoverage 1.0000e+00 0.49640 lowCoverage -0.12282976 1.6586e-01 lowCoverage 1.0000e+00 lowCoverage 0.260407 0.2844444 0.0116127 4 0.257979 0.313667 -0.0556875 5.6201e-01 1.5137e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0618e-01 6.9488e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0324745 7.3206e-01 lowCoverage 1.00000000 lowCoverage 0.4250765 0.2844444 0.2505713 3 0.4375715 0.313667 0.123905 1.7925e-04 4.2569e-01 lowCoverage 1.7925e-02 1.0000e+00 lowCoverage 4.8726e-03 8.1524e-01 lowCoverage 5.4140e-01 1.0000e+00 lowCoverage 0.090355 0.43635723 lowCoverage 1.000000 lowCoverage chr20 30592540 30593540 152400 C20orf112 ENSG00000197183 0.683451 248 7 0.691500 128 7 0.703501 89 7 0.635878 227 7 0.723810 35 4 0.76233 150 7 0.746289 76 7 0.748943 118 7 0.754683 80 7 0.818254 76 6 0.743363 185 7 0.709416 59 4 0.651566 151 7 NA 0 0 0.704052 102 7 0.875000 45 3 0.658730 44 6 0.455269 270 7 0.726068 136 7 0.730314 182 7 0.798190 104 7 0.228868 226 7 0.671123 152 6 0.740263 89 7 0.763403 105 7 0.858890 194 7 0.695756 147 7 0.8634921 55 6 0.585836 81 7 0.761741 207 7 0.727244 146 7 0.823006 392 7 0.4947046 134 7 0.659841 174 7 1.0000000 210 3 0.543594 187 7 0.847619 88 7 0.6979166 207 7 0.1510668 400 7 0.342476 363 7 0.196194 270 7 0.226642 332 7 0.2930448 312 7 0.734160 0.731552 0.796237 0.696217 0.8019858 0.82963 0.856535 0.765292 0.7993492 0.839784 0.741779 0.800117 0.638736 NA 0.792653 0.861044 0.749409 0.470497 0.724211 0.749964 0.802541 0.247898 0.769787 0.808558 0.787211 0.885444 0.721307 0.838203 0.6185316 0.780559 0.704240 0.873666 0.5115220 0.6737477 0.7256273 0.57790653 0.8919149 0.6416847 0.162079 0.362269 0.211552 0.242782 0.3138972 6 0.709704 0.716017 -0.0091102 7 0.699551 0.710659 -0.0111084 0.859726 0.6081205 insignificant 1 1.00000 insignificant 0.84533 0.4256174 insignificant 1 1 insignificant 0.00188887 0.9720404 insignificant 1 insignificant 0.709704 0.6640000 0.0618970 7 0.699551 0.6615417 0.0380091 2.5114e-05 3.6710e-06 weaklyHypermeth 5.7077e-04 4.0788e-04 weaklyHypermeth 1.4106e-01 1.5155e-03 inconclusive 1.0000e+00 0.1772217 insignificant 0.0044272 9.5764e-01 insignificant 1.0000e+00 insignificant 0.709704 0.2265951 0.4688602 7 0.699551 0.2401057 0.4594451 8.4654e-34 1.0000e+00 hypermethylated 2.1163e-31 1.0000e+00 hypermethylated 2.4510e-14 1.0000e+00 hypermethylated 6.1274e-12 1.0000e+00 hypermethylated 0.4698217 8.1802e-06 hypermethylated 0.00161608 hypermethylated 0.716017 0.6640000 0.0884494 7 0.710659 0.6615417 0.0491174 2.0962e-02 9.1541e-03 weaklyHypermeth 3.1761e-01 9.1541e-01 insignificant 1.4553e-01 0.01025214 inconclusive 1.0000e+00 0.93201 insignificant 0.00253835 9.7853e-01 insignificant 1.0000e+00 insignificant 0.716017 0.2265951 0.4831621 7 0.710659 0.240106 0.4705535 5.3083e-19 1.0000e+00 hypermethylated 1.0617e-16 1.0000e+00 hypermethylated 4.1443e-12 1.0000e+00 hypermethylated 1.0361e-09 1.0000e+00 hypermethylated 0.4679328 1.3130e-06 hypermethylated 0.00032826 hypermethylated 0.6640000 0.2265951 0.4197636 7 0.6615417 0.240106 0.421436 1.3670e-15 9.9997e-01 hypermethylated 3.4175e-13 1.0000e+00 hypermethylated 1.6196e-07 9.9866e-01 hypermethylated 4.4664e-05 1.0000e+00 hypermethylated 0.465394 0.00099176 hypermethylated 0.070840 hypermethylated chr20 30592671 30593671 152401 C20orf112 ENSG00000197183 0.683451 248 7 0.691500 128 7 0.703501 89 7 0.635878 227 7 0.723810 35 4 0.76233 150 7 0.746289 76 7 0.748943 118 7 0.754683 80 7 0.818254 76 6 0.743363 185 7 0.709416 59 4 0.651566 151 7 NA 0 0 0.704052 102 7 0.875000 45 3 0.658730 44 6 0.455269 270 7 0.726068 136 7 0.730314 182 7 0.798190 104 7 0.228868 226 7 0.671123 152 6 0.740263 89 7 0.763403 105 7 0.858890 194 7 0.695756 147 7 0.8634921 55 6 0.585836 81 7 0.761741 207 7 0.727244 146 7 0.823006 392 7 0.4947046 134 7 0.659841 174 7 1.0000000 210 3 0.543594 187 7 0.847619 88 7 0.6979166 207 7 0.1510668 400 7 0.342476 363 7 0.196194 270 7 0.226642 332 7 0.2930448 312 7 0.734160 0.731552 0.796237 0.696217 0.8019858 0.82963 0.856535 0.765292 0.7993492 0.839784 0.741779 0.800117 0.638736 NA 0.792653 0.861044 0.749409 0.470497 0.724211 0.749964 0.802541 0.247898 0.769787 0.808558 0.787211 0.885444 0.721307 0.838203 0.6185316 0.780559 0.704240 0.873666 0.5115220 0.6737477 0.7256273 0.57790653 0.8919149 0.6416847 0.162079 0.362269 0.211552 0.242782 0.3138972 6 0.709704 0.716017 -0.0091102 7 0.699551 0.710659 -0.0111084 0.859726 0.6081205 insignificant 1 1.00000 insignificant 0.84533 0.4256174 insignificant 1 1 insignificant 0.00188887 0.9720404 insignificant 1 insignificant 0.709704 0.6640000 0.0618970 7 0.699551 0.6615417 0.0380091 2.5114e-05 3.6710e-06 weaklyHypermeth 5.7077e-04 4.0788e-04 weaklyHypermeth 1.4106e-01 1.5155e-03 inconclusive 1.0000e+00 0.1772217 insignificant 0.0044272 9.5764e-01 insignificant 1.0000e+00 insignificant 0.709704 0.2265951 0.4688602 7 0.699551 0.2401057 0.4594451 8.4654e-34 1.0000e+00 hypermethylated 2.1163e-31 1.0000e+00 hypermethylated 2.4510e-14 1.0000e+00 hypermethylated 6.1274e-12 1.0000e+00 hypermethylated 0.4698217 8.1802e-06 hypermethylated 0.00161608 hypermethylated 0.716017 0.6640000 0.0884494 7 0.710659 0.6615417 0.0491174 2.0962e-02 9.1541e-03 weaklyHypermeth 3.1761e-01 9.1541e-01 insignificant 1.4553e-01 0.01025214 inconclusive 1.0000e+00 0.93201 insignificant 0.00253835 9.7853e-01 insignificant 1.0000e+00 insignificant 0.716017 0.2265951 0.4831621 7 0.710659 0.240106 0.4705535 5.3083e-19 1.0000e+00 hypermethylated 1.0617e-16 1.0000e+00 hypermethylated 4.1443e-12 1.0000e+00 hypermethylated 1.0361e-09 1.0000e+00 hypermethylated 0.4679328 1.3130e-06 hypermethylated 0.00032826 hypermethylated 0.6640000 0.2265951 0.4197636 7 0.6615417 0.240106 0.421436 1.3670e-15 9.9997e-01 hypermethylated 3.4175e-13 1.0000e+00 hypermethylated 1.6196e-07 9.9866e-01 hypermethylated 4.4664e-05 1.0000e+00 hypermethylated 0.465394 0.00099176 hypermethylated 0.070840 hypermethylated chr20 30592834 30593834 152402 C20orf112 ENSG00000197183 0.683451 248 7 0.691500 128 7 0.703501 89 7 0.635878 227 7 0.723810 35 4 0.76233 150 7 0.746289 76 7 0.748943 118 7 0.754683 80 7 0.818254 76 6 0.743363 185 7 0.709416 59 4 0.651566 151 7 NA 0 0 0.704052 102 7 0.875000 45 3 0.658730 44 6 0.455269 270 7 0.726068 136 7 0.730314 182 7 0.798190 104 7 0.228868 226 7 0.671123 152 6 0.740263 89 7 0.763403 105 7 0.858890 194 7 0.695756 147 7 0.8634921 55 6 0.585836 81 7 0.761741 207 7 0.727244 146 7 0.823006 392 7 0.4947046 134 7 0.659841 174 7 1.0000000 210 3 0.543594 187 7 0.847619 88 7 0.6979166 207 7 0.1510668 400 7 0.342476 363 7 0.196194 270 7 0.226642 332 7 0.2930448 312 7 0.734160 0.731552 0.796237 0.696217 0.8019858 0.82963 0.856535 0.765292 0.7993492 0.839784 0.741779 0.800117 0.638736 NA 0.792653 0.861044 0.749409 0.470497 0.724211 0.749964 0.802541 0.247898 0.769787 0.808558 0.787211 0.885444 0.721307 0.838203 0.6185316 0.780559 0.704240 0.873666 0.5115220 0.6737477 0.7256273 0.57790653 0.8919149 0.6416847 0.162079 0.362269 0.211552 0.242782 0.3138972 6 0.709704 0.716017 -0.0091102 7 0.699551 0.710659 -0.0111084 0.859726 0.6081205 insignificant 1 1.00000 insignificant 0.84533 0.4256174 insignificant 1 1 insignificant 0.00188887 0.9720404 insignificant 1 insignificant 0.709704 0.6640000 0.0618970 7 0.699551 0.6615417 0.0380091 2.5114e-05 3.6710e-06 weaklyHypermeth 5.7077e-04 4.0788e-04 weaklyHypermeth 1.4106e-01 1.5155e-03 inconclusive 1.0000e+00 0.1772217 insignificant 0.0044272 9.5764e-01 insignificant 1.0000e+00 insignificant 0.709704 0.2265951 0.4688602 7 0.699551 0.2401057 0.4594451 8.4654e-34 1.0000e+00 hypermethylated 2.1163e-31 1.0000e+00 hypermethylated 2.4510e-14 1.0000e+00 hypermethylated 6.1274e-12 1.0000e+00 hypermethylated 0.4698217 8.1802e-06 hypermethylated 0.00161608 hypermethylated 0.716017 0.6640000 0.0884494 7 0.710659 0.6615417 0.0491174 2.0962e-02 9.1541e-03 weaklyHypermeth 3.1761e-01 9.1541e-01 insignificant 1.4553e-01 0.01025214 inconclusive 1.0000e+00 0.93201 insignificant 0.00253835 9.7853e-01 insignificant 1.0000e+00 insignificant 0.716017 0.2265951 0.4831621 7 0.710659 0.240106 0.4705535 5.3083e-19 1.0000e+00 hypermethylated 1.0617e-16 1.0000e+00 hypermethylated 4.1443e-12 1.0000e+00 hypermethylated 1.0361e-09 1.0000e+00 hypermethylated 0.4679328 1.3130e-06 hypermethylated 0.00032826 hypermethylated 0.6640000 0.2265951 0.4197636 7 0.6615417 0.240106 0.421436 1.3670e-15 9.9997e-01 hypermethylated 3.4175e-13 1.0000e+00 hypermethylated 1.6196e-07 9.9866e-01 hypermethylated 4.4664e-05 1.0000e+00 hypermethylated 0.465394 0.00099176 hypermethylated 0.070840 hypermethylated chr20 30614951 30615951 152404 C20orf112 ENSG00000197183 0.435053 137 5 0.668006 120 5 0.426661 137 5 0.684820 180 5 0.648459 56 3 0.51081 196 5 0.736905 72 5 0.630897 153 5 0.511722 107 4 0.813605 97 4 0.649919 192 5 0.478022 39 3 0.573259 161 4 0.641778 104 6 0.368961 121 4 0.041667 10 1 0.483333 32 3 0.696847 220 5 0.591329 161 5 0.503354 142 4 0.744988 83 4 0.552742 98 4 0.781853 98 6 0.572147 79 5 0.770145 211 5 0.755994 193 5 0.522176 137 5 0.8225427 70 3 0.630633 163 5 0.731913 227 5 0.669768 192 5 0.840799 253 5 0.4975591 102 5 0.699976 122 5 0.8288288 87 3 0.602222 130 5 0.582220 110 6 0.8344095 183 5 0.5399014 174 5 0.525755 137 5 0.511692 143 5 0.741327 123 3 0.4765396 148 5 0.603865 0.612242 0.474369 0.661938 0.5919489 0.81850 0.577561 0.642812 0.5212658 0.719721 0.735656 0.421134 0.527926 0.606236 0.494719 0.468610 0.229932 0.600767 0.616261 0.629832 0.558586 0.530802 0.784667 0.611953 0.734644 0.767477 0.619599 0.735771 0.7658752 0.640196 0.634342 0.774136 0.5767329 0.6298800 0.7471132 0.56066218 0.6069967 0.8866750 0.365433 0.535910 0.568981 0.671182 0.5187764 3 0.637259 0.678492 -0.0646727 5 0.576172 0.736250 -0.1600780 0.999760 0.0227473 weaklyHypometh 1 1.00000 insignificant 1.00000 0.0062387 weaklyHypometh 1 1 insignificant -0.14487145 0.0056801 lowCoverage 1 lowCoverage 0.637521 0.7257844 -0.0827722 5 0.640191 0.6847822 -0.0445915 8.4463e-01 4.5706e-03 weaklyHypometh 1.0000e+00 3.0471e-01 insignificant 8.9836e-01 2.8188e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.1194323 1.0788e-01 lowCoverage 1.0000e+00 lowCoverage 0.637186 0.4841379 0.1210703 5 0.620215 0.6472562 -0.0270416 2.0439e-04 8.2882e-01 weaklyHypermeth 6.5932e-03 1.0000e+00 weaklyHypermeth 2.5911e-01 6.3229e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0042727 9.4449e-01 lowCoverage 1.00000000 lowCoverage 0.678135 0.7257844 -0.0582351 5 0.706944 0.6847822 0.0221618 4.6040e-01 3.5292e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.0849e-01 0.35523009 insignificant 1.0000e+00 1.00000 insignificant 0.02543918 7.0266e-01 lowCoverage 1.0000e+00 lowCoverage 0.677957 0.4841379 0.1898686 5 0.670312 0.647256 0.0230558 1.4210e-06 9.7029e-01 weaklyHypermeth 6.1781e-05 1.0000e+00 weaklyHypermeth 7.0755e-03 9.7062e-01 weaklyHypermeth 2.2111e-01 1.0000e+00 insignificant 0.1405988 3.7620e-02 lowCoverage 1.00000000 lowCoverage 0.7267760 0.4841379 0.2316725 5 0.7703800 0.647256 0.123124 7.9836e-06 9.6823e-01 hypermethylated 1.1405e-03 1.0000e+00 hypermethylated 7.2435e-03 9.6278e-01 weaklyHypermeth 6.0363e-01 1.0000e+00 insignificant 0.115160 0.15025570 lowCoverage 1.000000 lowCoverage chr20 31619642 31620642 152419 CBFA2T2 ENSG00000078699 0.040718 220 5 0.021978 189 5 0.070382 151 5 0.040124 220 5 0.028571 52 5 0.11659 208 5 0.016036 126 5 0.049777 143 5 0.012500 148 5 0.035294 122 5 0.022125 192 5 0.120046 113 5 0.017316 176 5 NA 0 0 0.085190 141 5 0.050000 84 5 0.022222 135 5 0.097834 263 5 0.014286 102 5 0.058819 235 5 0.066154 55 5 0.100253 166 5 0.070843 152 5 0.095981 116 5 0.062273 111 5 0.068138 263 5 0.076111 115 5 0.0720588 59 5 0.024687 176 5 0.027017 272 5 0.047826 247 5 0.045613 387 5 0.4250124 94 4 0.380175 104 5 0.5866667 112 5 0.113563 43 2 0.334744 70 5 0.0762162 162 5 0.0404821 426 5 0.134450 243 5 0.069646 304 5 0.100645 250 5 0.0761919 350 5 0.034860 0.021742 0.068054 0.042397 0.0307474 0.12715 0.019092 0.051866 0.0082781 0.037982 0.025406 0.111339 0.018918 NA 0.074639 0.043460 0.018396 0.097440 0.015374 0.056338 0.055273 0.104036 0.066867 0.087645 0.062515 0.060411 0.080224 0.067613 0.0328816 0.031325 0.041451 0.044955 0.3822047 0.4727605 0.4743929 0.08936591 0.4024283 0.0847503 0.038214 0.134415 0.063841 0.104678 0.0730363 5 0.045033 0.053799 -0.0051174 5 0.053095 0.060663 -0.0075679 0.862793 0.3071291 insignificant 1 1.00000 insignificant 0.96940 0.1585162 insignificant 1 1 insignificant -0.01466858 0.1707120 lowCoverage 1 lowCoverage 0.045033 0.2769231 -0.2324424 5 0.053095 0.3247666 -0.2716717 1.0000e+00 1.4260e-11 hypomethylated 1.0000e+00 7.1300e-09 hypomethylated 1.0000e+00 3.1806e-05 hypomethylated 1.0000e+00 0.0106021 hypomethylated -0.2709854 1.8541e-02 lowCoverage 5.7939e-01 lowCoverage 0.045033 0.0699301 -0.0232490 5 0.053095 0.0778183 -0.0247235 9.2971e-01 2.7500e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4154e-01 9.6394e-04 weaklyHypometh 1.0000e+00 1.6066e-01 insignificant -0.0358721 8.7104e-02 lowCoverage 1.00000000 lowCoverage 0.053799 0.2769231 -0.2274072 5 0.060663 0.3247666 -0.2641038 1.0000e+00 1.5940e-07 hypomethylated 1.0000e+00 5.3134e-05 hypomethylated 9.9998e-01 0.00050787 hypomethylated 1.0000e+00 0.17885 insignificant -0.25631679 2.2831e-02 lowCoverage 6.5385e-01 lowCoverage 0.053799 0.0699301 -0.0174957 5 0.060663 0.077818 -0.0171556 8.5342e-01 1.5313e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.0011e-01 1.4807e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0212036 2.6702e-01 insignificant 1.00000000 insignificant 0.2769231 0.0699301 0.2091228 5 0.3247666 0.077818 0.246948 1.5840e-03 9.9988e-01 weaklyHypermeth 1.1315e-01 1.0000e+00 insignificant 3.9364e-02 9.9859e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.235113 0.03043875 lowCoverage 0.870123 lowCoverage chr20 33634584 33635584 152505 FER1L4 ENSG00000088340 0.891588 115 5 0.701523 224 6 0.768623 208 5 0.938425 168 5 0.825716 141 6 0.91244 302 5 0.896228 210 5 0.778154 194 6 0.777924 215 5 0.767689 156 5 0.772178 215 5 0.761110 115 5 0.763261 134 5 0.863915 79 5 0.761329 183 5 0.745514 117 5 0.592029 52 3 0.915198 167 5 0.850463 159 5 0.889174 196 5 0.917305 76 5 0.880518 107 5 0.739924 159 5 0.754658 112 5 0.763975 73 3 0.797886 286 5 0.655390 128 5 0.7134722 107 5 0.818611 179 5 0.947715 367 5 0.866055 280 5 0.929501 398 5 0.6735733 189 5 0.900381 125 5 0.7688889 128 4 0.794805 32 2 0.879774 184 5 0.9513647 247 5 0.9222485 267 5 0.915092 174 5 0.956364 123 5 0.791193 102 3 0.9804825 161 5 0.907789 0.851793 0.866841 0.943492 0.9514977 0.91340 0.900877 0.918128 0.8581512 0.896492 0.844772 0.888710 0.902553 0.825041 0.909147 0.871464 0.831458 0.934259 0.887257 0.933454 0.919200 0.887955 0.869039 0.925787 0.928363 0.958534 0.791014 0.903826 0.9052048 0.945445 0.936726 0.896360 0.7638470 0.8723615 0.9084054 0.81702362 0.8643235 0.9451638 0.914586 0.911878 0.938623 0.846462 0.9715714 4 0.890746 0.911532 -0.0158655 5 0.782762 0.811184 -0.0284213 0.979644 0.0845506 insignificant 1 1.00000 insignificant 0.89366 0.0953533 insignificant 1 1 insignificant -0.00679318 0.8394351 lowCoverage 1 lowCoverage 0.890746 0.8883978 0.0102138 5 0.782762 0.7935227 -0.0107604 2.5313e-01 3.2565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6160e-01 4.2392e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0195069 6.8186e-01 lowCoverage 1.0000e+00 lowCoverage 0.899637 0.9262394 -0.0302658 5 0.901219 0.9290459 -0.0278264 9.8485e-01 2.0380e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9275e-01 9.3059e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1044515 2.8035e-02 lowCoverage 0.80101283 lowCoverage 0.911532 0.8883978 0.0263319 5 0.811184 0.7935227 0.0176609 1.6536e-01 8.1650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3566e-01 0.78369917 insignificant 1.0000e+00 1.00000 insignificant -0.01271368 8.0273e-01 lowCoverage 1.0000e+00 lowCoverage 0.916186 0.9262394 -0.0156396 5 0.914597 0.929046 -0.0144492 9.2783e-01 3.2024e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5332e-01 2.3784e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0976583 4.4739e-02 lowCoverage 1.00000000 lowCoverage 0.8902439 0.9262394 -0.0503287 5 0.8855605 0.929046 -0.043485 9.2062e-01 1.1687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8323e-01 2.6142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.084945 0.14260980 lowCoverage 1.000000 lowCoverage chr20 33709819 33710819 152507 CPNE1 ENSG00000214078 0.563833 176 5 0.536586 140 5 0.440000 104 5 0.546105 113 5 0.451389 62 5 0.56668 229 5 0.528331 85 5 0.584879 121 5 0.496261 70 5 0.581746 71 5 0.498089 151 5 0.432294 49 5 0.586927 115 5 0.450000 19 2 0.560000 86 5 0.583782 55 4 0.751818 65 4 0.541599 89 5 0.487762 116 5 0.566949 176 5 0.637500 43 4 0.598133 71 4 0.573333 108 5 0.655882 54 4 0.520833 41 4 0.564942 128 5 0.564815 57 4 0.5916667 47 4 0.541769 116 5 0.569842 158 5 0.559506 114 5 0.598359 254 5 0.4427814 94 5 0.499048 63 5 0.4286896 101 5 0.541176 37 2 0.579960 81 5 0.4622577 124 5 0.6160953 174 5 0.603515 165 5 0.602797 101 5 0.616580 124 5 0.5343010 177 5 0.681988 0.597853 0.530952 0.667320 0.5516031 0.67910 0.664350 0.675179 0.5737719 0.662248 0.582639 0.560509 0.704923 0.642257 0.719947 0.681320 0.830440 0.691797 0.603251 0.729179 0.664894 0.688370 0.649113 0.759574 0.625000 0.711600 0.675926 0.701418 0.6668694 0.686451 0.699283 0.713821 0.5496597 0.6279129 0.5492369 0.64386733 0.7109454 0.5805572 0.729424 0.733817 0.732889 0.757863 0.6636647 3 0.631931 0.666667 -0.0343069 5 0.543381 0.577239 -0.0338579 0.968289 0.0385748 weaklyHypometh 1 1.00000 insignificant 0.75307 0.0321973 weaklyHypometh 1 1 insignificant -0.04363047 0.0330742 lowCoverage 1 lowCoverage 0.631931 0.5320000 0.0669127 5 0.543381 0.4735083 0.0698727 6.3695e-03 9.8458e-01 weaklyHypermeth 1.0616e-01 1.0000e+00 insignificant 1.6323e-01 9.1507e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0454325 1.4930e-01 lowCoverage 1.0000e+00 lowCoverage 0.631931 0.6815115 -0.0483804 5 0.543381 0.5869051 -0.0435240 9.0436e-01 2.8302e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5193e-01 6.9432e-03 weaklyHypometh 1.0000e+00 8.6790e-01 insignificant -0.0569064 2.2956e-02 lowCoverage 0.74052519 lowCoverage 0.666667 0.5320000 0.1035239 5 0.577239 0.4735083 0.1037306 4.9260e-04 9.9989e-01 weaklyHypermeth 1.0709e-02 1.0000e+00 weaklyHypermeth 1.4857e-02 0.98923532 weaklyHypermeth 3.3015e-01 1.00000 insignificant 0.08906297 1.1815e-02 lowCoverage 4.2381e-01 lowCoverage 0.666667 0.6815115 -0.0164008 5 0.577239 0.586905 -0.0096661 7.9447e-01 3.2567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8960e-01 1.2691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0132759 5.0109e-01 lowCoverage 1.00000000 lowCoverage 0.5320000 0.6815115 -0.1163145 5 0.4735083 0.586905 -0.113397 9.9505e-01 2.9342e-04 weaklyHypometh 1.0000e+00 1.3421e-02 weaklyHypometh 9.9748e-01 3.6829e-03 weaklyHypometh 1.0000e+00 1.7538e-01 insignificant -0.102339 0.00698813 lowCoverage 0.292111 lowCoverage chr20 34462587 34463587 152537 DLGAP4 ENSG00000080845 0.717462 347 9 0.692829 338 9 0.651914 268 9 0.723181 272 9 0.742572 180 9 0.77865 482 9 0.582286 233 9 0.732548 249 9 0.698740 193 9 0.755499 185 9 0.747379 423 9 0.663039 122 9 0.805160 235 9 0.536458 119 6 0.774843 238 9 0.599018 86 6 0.536371 78 4 0.582783 436 9 0.758337 348 9 0.785285 349 9 0.865213 128 9 0.574334 175 9 0.671927 235 9 0.630844 190 10 0.808333 174 9 0.816956 394 9 0.768449 247 9 0.7006899 125 10 0.726365 308 9 0.804538 348 9 0.781912 393 9 0.816541 438 9 0.1981088 255 9 0.342224 272 9 0.3915060 391 9 0.267138 114 7 0.187604 260 7 0.3153445 462 9 0.5688001 440 9 0.564136 412 9 0.563670 350 9 0.545883 378 9 0.5714670 304 9 0.723747 0.671820 0.650760 0.736147 0.7589003 0.76508 0.740244 0.737889 0.7209228 0.744205 0.747241 0.676200 0.803504 0.639028 0.797284 0.640419 0.639788 0.571157 0.735644 0.784025 0.860528 0.521557 0.757470 0.710124 0.783480 0.824106 0.744233 0.728459 0.7377104 0.809496 0.791955 0.814024 0.1813087 0.2089773 0.2640148 0.32254970 0.1976712 0.3250954 0.554088 0.558330 0.557580 0.539247 0.5621374 9 0.714148 0.762814 -0.0522051 9 0.644341 0.759735 -0.1153936 0.999978 0.0016574 weaklyHypometh 1 0.65438 insignificant 0.99999 0.0068884 weaklyHypometh 1 1 insignificant -0.05395751 0.1008995 insignificant 1 insignificant 0.714148 0.2298916 0.4799065 9 0.644341 0.2709093 0.3734319 2.5786e-45 1.0000e+00 hypermethylated 8.5953e-43 1.0000e+00 hypermethylated 6.4720e-17 1.0000e+00 hypermethylated 1.6180e-14 1.0000000 hypermethylated 0.4095633 2.9052e-06 hypermethylated 3.6315e-04 hypermethylated 0.714313 0.5891720 0.1671677 9 0.713454 0.5667037 0.1467503 5.9435e-13 1.0000e+00 weaklyHypermeth 4.9530e-11 1.0000e+00 weaklyHypermeth 5.4082e-09 1.0000e+00 weaklyHypermeth 7.7260e-07 1.0000e+00 weaklyHypermeth 0.1304264 1.3092e-06 weaklyHypermeth 0.00065459 weaklyHypermeth 0.761360 0.2303307 0.5317790 9 0.696424 0.3316668 0.3647567 2.1766e-36 1.0000e+00 hypermethylated 5.4415e-34 1.0000e+00 hypermethylated 4.6902e-17 1.00000000 hypermethylated 1.5634e-14 1.00000 hypermethylated 0.46352085 2.8787e-07 hypermethylated 5.3330e-05 hypermethylated 0.762831 0.5891720 0.2217201 9 0.761898 0.566704 0.1951943 1.5303e-16 1.0000e+00 hypermethylated 2.5506e-14 1.0000e+00 hypermethylated 8.0856e-11 1.0000e+00 hypermethylated 1.6171e-08 1.0000e+00 hypermethylated 0.1843839 1.2702e-05 weaklyHypermeth 0.00254045 weaklyHypermeth 0.2297143 0.5891720 -0.3197745 9 0.2755558 0.566704 -0.291148 9.9999e-01 1.0825e-11 hypomethylated 1.0000e+00 1.5464e-09 hypomethylated 1.0000e+00 4.7983e-08 hypomethylated 1.0000e+00 1.1996e-05 hypomethylated -0.279137 0.00033737 hypomethylated 0.033737 hypomethylated chr20 34524178 34525178 152538 DLGAP4 ENSG00000080845 0.089549 161 8 0.057005 116 5 0.153744 149 5 0.170754 156 5 0.100234 146 5 0.25391 107 9 0.176896 148 5 0.131422 92 5 0.096553 125 5 0.173605 147 5 0.256080 181 5 0.077731 171 5 0.052335 171 5 NA 0 0 0.094867 105 5 0.173068 114 5 0.065843 135 5 0.056710 73 7 0.095483 190 9 0.187805 74 5 0.130303 55 5 0.083333 8 1 0.092857 64 3 0.226667 50 5 0.200000 5 1 0.086851 128 10 0.123443 53 5 0.1427273 53 5 0.070857 90 4 0.134671 118 5 0.056978 105 10 0.214644 141 10 0.0000000 164 5 0.016897 83 4 0.0000000 166 8 0.000000 168 6 0.040000 36 5 0.0000000 149 10 0.0909091 145 6 0.102273 125 7 0.062500 63 6 0.000000 65 7 0.0000000 79 5 0.057039 0.000000 0.166360 0.026700 0.0039788 0.13996 0.216693 0.013220 0.0927900 0.077768 0.077924 0.159529 0.034483 NA 0.086699 0.070859 0.083420 0.128079 0.020871 0.047191 0.308255 0.155932 0.064039 0.193103 0.186890 0.032259 0.128079 0.089655 0.0078818 0.052545 0.061472 0.183135 0.0000000 0.0472057 0.0089655 0.00047562 0.0068966 0.0000000 0.000000 0.112069 0.034483 0.000000 0.0086207 1 0.111675 0.117647 -0.0119591 5 0.090547 0.115021 -0.0244739 0.715175 0.2324822 insignificant 1 1.00000 insignificant 0.18271 0.8366254 insignificant 1 1 insignificant -0.00061493 0.9779103 insignificant 1 insignificant 0.111675 0.0039474 0.1065746 5 0.090547 0.0030815 0.0874653 1.7870e-07 1.0000e+00 weaklyHypermeth 6.1619e-06 1.0000e+00 weaklyHypermeth 4.6326e-07 1.0000e+00 weaklyHypermeth 3.3090e-05 1.0000000 weaklyHypermeth 0.1201799 1.3571e-07 weaklyHypermeth 1.9387e-05 weaklyHypermeth 0.111675 0.0042105 0.0631721 1 0.090547 0.0084239 0.0821228 1.3143e-06 1.0000e+00 lowCoverage 5.7142e-05 1.0000e+00 lowCoverage 3.2764e-06 1.0000e+00 lowCoverage 2.1843e-04 1.0000e+00 lowCoverage 0.0785263 1.7365e-02 weaklyHypermeth 0.64011150 insignificant 0.118391 0.0039216 0.1139063 5 0.165400 0.0023704 0.1630301 9.1890e-04 1.0000e+00 weaklyHypermeth 1.9551e-02 1.0000e+00 weaklyHypermeth 2.3471e-03 1.00000000 weaklyHypermeth 7.0134e-02 1.00000 weaklyHypermeth 0.12079485 8.4954e-06 weaklyHypermeth 9.4394e-04 weaklyHypermeth 0.118664 0.0063025 0.0901165 1 0.195473 0.098567 0.0969061 7.1295e-04 1.0000e+00 lowCoverage 2.0370e-02 1.0000e+00 lowCoverage 2.4192e-03 1.0000e+00 lowCoverage 8.8298e-02 1.0000e+00 lowCoverage 0.0791412 1.8262e-02 weaklyHypermeth 0.86960614 insignificant 0.0039370 0.0083857 -0.0084446 6 0.0025679 0.173687 -0.171119 1.0000e+00 9.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.041654 0.13111130 insignificant 1.000000 insignificant chr20 34636995 34637995 152541 TGIF2 ENSG00000118707 0.097329 212 5 0.042395 263 6 0.036881 207 4 0.071756 245 5 0.034121 187 5 0.24374 330 4 0.055175 199 5 0.053063 203 5 0.033081 181 4 0.078663 174 4 0.136278 213 5 0.020967 129 4 0.022008 148 4 0.018018 76 2 0.021356 225 4 0.042555 106 4 0.052083 49 2 0.036703 246 5 0.023677 217 5 0.098931 329 5 0.059646 145 4 0.011628 76 2 0.032412 165 4 0.032010 174 4 0.043519 131 5 0.026062 245 5 0.034602 241 4 0.0514324 126 5 0.175103 242 5 0.026606 267 6 0.042795 288 6 0.055887 302 5 0.0092593 182 5 0.024471 221 5 0.2511713 143 5 0.017544 63 3 0.164736 138 6 0.1337683 271 5 0.0074935 355 5 0.050528 354 6 0.044359 173 5 0.012907 260 4 0.0063079 243 5 0.069313 0.056908 0.065195 0.042257 0.0262738 0.14239 0.083754 0.033897 0.0452911 0.089441 0.081016 0.023687 0.020111 0.047454 0.025404 0.057365 0.054872 0.044268 0.031069 0.069786 0.097488 0.029770 0.042329 0.037430 0.032720 0.033195 0.037799 0.083912 0.0568436 0.040570 0.036819 0.079694 0.0163546 0.0106742 0.2967982 0.07652327 0.0516551 0.1445836 0.013685 0.033007 0.076795 0.019439 0.0075640 4 0.061183 0.050417 0.0125423 5 0.055307 0.029956 0.0253510 0.083151 0.9911774 insignificant 1 1.00000 insignificant 0.32354 0.9860823 insignificant 1 1 insignificant 0.01163024 0.4987212 lowCoverage 1 lowCoverage 0.061214 0.0998024 -0.0407260 5 0.073742 0.1056220 -0.0318796 3.5909e-01 3.8959e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.9724e-02 2.9842e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0392195 3.8809e-01 lowCoverage 1.0000e+00 lowCoverage 0.061214 0.0238267 0.0358118 5 0.073742 0.0226442 0.0510983 2.8370e-03 9.9009e-01 weaklyHypermeth 7.0926e-02 1.0000e+00 weaklyHypermeth 5.3423e-03 9.4815e-01 weaklyHypermeth 1.5264e-01 1.0000e+00 insignificant 0.0366197 2.7895e-02 lowCoverage 0.80101283 lowCoverage 0.050897 0.1013780 -0.0504180 5 0.154956 0.2042165 -0.0492607 9.0839e-01 1.2121e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2677e-01 0.46115526 insignificant 1.0000e+00 1.00000 insignificant -0.05084973 2.7374e-01 lowCoverage 1.0000e+00 lowCoverage 0.050522 0.0238267 0.0250804 5 0.039941 0.022644 0.0172969 1.9418e-02 9.8802e-01 weaklyHypermeth 4.0453e-01 1.0000e+00 insignificant 4.1061e-02 9.6628e-01 weaklyHypermeth 9.5491e-01 1.0000e+00 insignificant 0.0249895 1.2737e-01 lowCoverage 1.00000000 lowCoverage 0.0998024 0.0238267 0.0709123 5 0.1056220 0.022644 0.082978 7.2457e-02 9.9042e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0874e-01 7.9355e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.075839 0.12132317 lowCoverage 1.000000 lowCoverage chr20 34923431 34924431 152546 C20orf117 ENSG00000149639 0.259455 261 7 0.206801 526 10 0.295710 460 10 0.255094 285 8 0.335932 227 7 0.44719 498 9 0.403004 367 7 0.386669 331 7 0.279619 353 7 0.362866 282 7 0.398864 423 7 0.334086 161 7 0.227291 248 7 0.267243 175 6 0.280958 302 7 0.454626 188 7 0.498355 29 2 0.178140 329 10 0.294075 453 7 0.325407 340 10 0.553483 178 7 0.164626 137 6 0.275384 308 10 0.358737 197 7 0.394331 141 7 0.240155 512 10 0.287745 341 7 0.3441797 306 7 0.373790 370 7 0.193124 661 10 0.165371 553 10 0.367711 383 9 0.0145968 441 10 0.004329 213 7 0.0090909 123 6 0.000000 74 6 0.026128 421 7 0.0514642 457 10 0.2229027 348 7 0.210913 281 7 0.222824 217 6 0.351848 222 7 0.1940731 199 10 0.315697 0.263280 0.354340 0.297144 0.3422239 0.50523 0.427635 0.258348 0.2686654 0.365544 0.353356 0.282819 0.178536 0.311228 0.254650 0.373776 0.360202 0.215403 0.230992 0.330066 0.379336 0.115755 0.331871 0.301747 0.326811 0.289135 0.233233 0.279634 0.3116501 0.216667 0.218211 0.437342 0.0060317 0.0056365 0.0150678 0.00000000 0.0340058 0.0683801 0.199214 0.213655 0.169673 0.203804 0.2268897 7 0.337183 0.301444 0.0252556 9 0.270027 0.344289 -0.0742616 0.017135 0.9884181 weaklyHypermeth 1 1.00000 insignificant 0.21307 0.9238809 insignificant 1 1 insignificant 0.01468269 0.7023635 insignificant 1 insignificant 0.337185 0.0387507 0.3261613 9 0.274033 0.0242398 0.2497932 7.8054e-34 1.0000e+00 hypermethylated 1.3009e-31 1.0000e+00 hypermethylated 2.0417e-17 1.0000e+00 hypermethylated 6.8056e-15 1.0000000 hypermethylated 0.3069676 2.6677e-13 hypermethylated 1.3339e-10 hypermethylated 0.337237 0.2770324 0.1074759 7 0.294575 0.2724509 0.0221245 1.9730e-06 9.9984e-01 weaklyHypermeth 8.2209e-05 1.0000e+00 weaklyHypermeth 8.4935e-06 9.9991e-01 weaklyHypermeth 5.3084e-04 1.0000e+00 weaklyHypermeth 0.0840570 3.9131e-02 weaklyHypermeth 0.90004345 insignificant 0.300662 0.0387507 0.3039721 9 0.238147 0.0242398 0.2139072 3.1255e-25 1.0000e+00 hypermethylated 5.2092e-23 1.0000e+00 hypermethylated 2.8200e-13 1.00000000 hypermethylated 5.6400e-11 1.00000 hypermethylated 0.29228490 1.3360e-06 hypermethylated 1.9085e-04 hypermethylated 0.301102 0.2770324 0.0885612 7 0.284679 0.272451 0.0122281 6.5467e-04 9.9690e-01 weaklyHypermeth 1.9255e-02 1.0000e+00 weaklyHypermeth 2.0885e-03 9.9953e-01 weaklyHypermeth 8.0327e-02 1.0000e+00 weaklyHypermeth 0.0693743 1.3143e-01 insignificant 1.00000000 insignificant 0.0387507 0.2764613 -0.2367070 7 0.0242398 0.199696 -0.175456 1.0000e+00 6.1158e-14 hypomethylated 1.0000e+00 1.5289e-11 hypomethylated 1.0000e+00 4.6275e-07 hypomethylated 1.0000e+00 9.2550e-05 hypomethylated -0.222911 0.00090896 hypomethylated 0.070840 hypomethylated chr20 35416639 35417639 152554 SRC ENSG00000197122 0.729059 305 5 0.823376 199 5 0.824962 125 5 0.926059 209 6 0.960000 54 5 0.85683 455 6 0.817030 91 3 0.902067 140 5 0.843322 103 5 0.891077 59 4 0.866639 253 5 0.818353 54 3 0.951111 98 5 0.935455 46 3 0.953333 71 4 0.827657 41 3 0.923077 24 2 0.703623 384 5 0.926702 150 5 0.925753 277 5 0.765749 122 5 0.668661 77 4 0.892468 148 5 0.808333 93 5 0.903434 214 4 0.923939 283 6 0.635287 138 5 0.9392857 56 3 0.890758 163 4 0.965396 229 6 0.881645 278 6 0.911659 353 5 0.6927656 167 5 0.829618 165 4 0.9523810 270 5 0.859572 58 5 0.942101 169 5 0.8130599 287 6 0.9417514 256 5 0.927795 285 5 0.929356 184 5 0.896631 154 5 0.9288877 227 6 0.899715 0.810406 0.828721 0.929832 0.9775510 0.90523 0.819908 0.900383 0.8417065 0.862251 0.902210 0.878858 0.970522 0.953858 0.958844 0.807888 0.877798 0.846963 0.928122 0.927375 0.911965 0.849914 0.864606 0.880527 0.949632 0.893739 0.793646 0.936619 0.9133126 0.954544 0.907438 0.924550 0.9032242 0.8458017 0.9679300 0.81618076 0.9209141 0.8994546 0.953359 0.941629 0.932891 0.919786 0.9312686 2 0.884603 0.886258 -0.0063774 5 0.845950 0.795113 0.0508365 0.144126 0.3690238 insignificant 1 1.00000 insignificant 0.38596 0.7728895 insignificant 1 1 insignificant 0.02138960 0.5473785 lowCoverage 1 lowCoverage 0.884603 0.8897849 0.0052068 5 0.845950 0.7455785 0.1003712 1.2904e-02 1.9562e-01 weaklyHypermeth 1.9853e-01 1.0000e+00 insignificant 5.8895e-01 7.2842e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0220248 6.1816e-01 lowCoverage 1.0000e+00 lowCoverage 0.884812 0.9321881 -0.0403960 5 0.875830 0.9317172 -0.0558870 9.9450e-01 3.9556e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8256e-01 1.6843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0546100 5.5425e-03 lowCoverage 0.23545105 lowCoverage 0.886258 0.8897849 0.0105783 5 0.795113 0.7455785 0.0495347 1.4922e-01 4.0474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8121e-01 0.63690105 insignificant 1.0000e+00 1.00000 insignificant 0.00063518 9.9003e-01 lowCoverage 1.0000e+00 lowCoverage 0.887855 0.9321881 -0.0323688 5 0.894299 0.931717 -0.0374185 9.9621e-01 3.0708e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9597e-01 1.2197e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0759996 3.3596e-02 lowCoverage 1.00000000 lowCoverage 0.8905830 0.9321881 -0.0369868 5 0.8698416 0.931717 -0.061876 8.3830e-01 7.1697e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0966e-01 2.5551e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.076635 0.10732199 insignificant 1.000000 insignificant chr20 35866192 35867192 152613 CTNNBL1 ENSG00000132792 0.957509 255 5 0.717310 61 5 1.000000 22 2 0.915465 170 5 0.981818 26 2 0.89558 276 5 0.965152 29 2 0.958947 48 3 0.666667 7 0 0.944444 20 2 0.931560 118 5 1.000000 3 0 0.875000 15 2 1.000000 10 0 1.000000 14 2 NA 0 0 NA 0 0 0.803828 231 5 0.968182 97 3 0.948958 184 5 0.960000 34 2 0.928571 14 2 0.912644 76 5 0.900000 46 3 0.954047 226 5 0.956620 86 5 0.933333 34 3 1.0000000 4 0 0.907879 77 4 0.952849 96 5 0.978378 109 5 0.982473 182 5 0.9500000 80 5 0.977143 75 4 1.0000000 95 4 0.958704 83 5 0.980000 49 4 0.9625506 148 5 0.8998551 165 5 0.972353 138 5 0.934927 155 5 0.940000 74 4 0.8850816 123 5 0.926031 0.893275 1.000000 0.975610 0.9545455 0.89550 0.912879 0.897368 1.0000000 0.888889 0.961111 NA 0.875000 1.000000 1.000000 NA NA 0.961483 0.920455 0.964839 0.900000 0.928571 0.948276 1.000000 0.951784 0.960769 0.916667 1.000000 0.9696970 0.962251 0.945946 0.986486 0.9464286 0.9761905 1.0000000 0.97368421 1.0000000 0.9711538 0.890244 1.000000 0.965116 0.933333 0.7884615 0 0.929968 0.955285 -0.0247743 5 0.937151 0.960486 -0.0233357 0.998959 0.0410459 weaklyHypometh 1 1.00000 insignificant 0.92209 0.5109546 insignificant 1 1 insignificant -0.02887624 0.2525313 lowCoverage 1 lowCoverage 0.929924 0.9716981 -0.0418018 5 0.924581 0.9672717 -0.0426910 9.9891e-01 3.2079e-03 weaklyHypometh 1.0000e+00 2.4676e-01 insignificant 9.9118e-01 7.8782e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0530430 3.8890e-02 lowCoverage 9.7224e-01 lowCoverage 0.929924 0.9221374 0.0064523 5 0.924581 0.9259390 -0.0013583 1.6414e-01 6.6618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3092e-01 9.8500e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0080866 7.7254e-01 lowCoverage 1.00000000 lowCoverage 0.955193 0.9716981 -0.0171584 5 0.952584 0.9672717 -0.0146882 8.4300e-01 1.2715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3590e-01 0.26251586 insignificant 1.0000e+00 1.00000 insignificant -0.02416672 5.5498e-02 lowCoverage 1.0000e+00 lowCoverage 0.955193 0.9221374 0.0339149 5 0.952584 0.925939 0.0266445 7.0154e-03 8.9458e-01 weaklyHypermeth 1.6703e-01 1.0000e+00 insignificant 1.0068e-01 9.3304e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0207897 2.8448e-01 lowCoverage 1.00000000 lowCoverage 0.9716981 0.9221374 0.0462351 5 0.9672717 0.925939 0.041333 1.6007e-02 9.9490e-01 weaklyHypermeth 8.0036e-01 1.0000e+00 insignificant 4.2777e-02 9.9815e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.044956 0.04069902 lowCoverage 1.000000 lowCoverage chr20 35928810 35929810 152628 CTNNBL1 ENSG00000132792 0.966667 10 1 0.912857 82 5 0.814343 78 5 0.900000 13 0 0.772007 72 5 0.74889 25 2 0.937500 45 2 0.865967 56 5 0.795568 48 4 0.907545 64 5 0.930554 148 5 0.676786 51 5 0.842840 96 5 NA 0 0 0.906883 84 5 0.555556 26 2 0.710000 43 3 0.416667 13 0 0.937122 138 5 0.915556 18 2 0.970707 92 5 0.111111 5 0 0.820513 31 2 0.985714 45 5 0.875000 9 0 0.906380 64 5 0.885431 50 5 0.9214286 39 2 0.805456 64 5 0.960390 74 5 0.917143 62 5 0.673333 24 2 0.9634921 43 2 0.973333 73 5 1.0000000 51 5 0.812500 8 0 0.915000 55 5 0.9202778 47 4 0.8250000 11 1 0.900000 9 0 0.650000 14 1 0.333333 7 0 0.9375000 15 0 0.958333 0.907398 0.823124 0.910714 0.7678638 0.75079 0.926339 0.861389 0.7976910 0.908980 0.926960 0.675702 0.846511 NA 0.911365 0.677900 0.705357 0.437500 0.930246 0.910317 0.969877 0.445544 0.823260 0.987245 0.875342 0.901373 0.894730 0.919643 0.8120140 0.956981 0.908673 0.696429 0.9623016 0.9761905 1.0000000 0.83964286 0.9241071 0.9177083 0.731746 0.910714 0.723214 0.465774 0.8174603 0 0.859459 0.880143 -0.0207926 5 0.863721 0.890241 -0.0265202 0.929920 0.2350929 insignificant 1 1.00000 insignificant 0.95355 0.0513577 insignificant 1 1 insignificant -0.00289409 0.9703117 lowCoverage 1 lowCoverage 0.859459 0.9350181 -0.0763349 5 0.863721 0.9478257 -0.0841048 9.9936e-01 2.1424e-03 weaklyHypometh 1.0000e+00 1.7853e-01 insignificant 9.9947e-01 1.5950e-03 weaklyHypometh 1.0000e+00 0.1772217 insignificant -0.1142774 1.5091e-02 lowCoverage 4.8680e-01 lowCoverage 0.859459 0.7857143 0.0783932 0 0.863721 0.7450050 0.1187160 4.3012e-04 6.1163e-01 noCoverage 1.1625e-02 1.0000e+00 noCoverage 3.0608e-01 1.7799e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.0873231 4.8539e-01 lowCoverage 1.00000000 lowCoverage 0.880143 0.9350181 -0.0572809 5 0.890241 0.9478257 -0.0575846 9.9255e-01 6.5442e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7742e-01 0.09122190 insignificant 1.0000e+00 1.00000 insignificant -0.11138335 1.5533e-01 lowCoverage 1.0000e+00 lowCoverage 0.880143 0.7857143 0.1104102 0 0.890241 0.745005 0.1452361 9.6188e-04 8.8238e-01 noCoverage 2.6719e-02 1.0000e+00 noCoverage 1.4472e-01 5.7310e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.0902172 5.1031e-01 lowCoverage 1.00000000 lowCoverage 0.9350181 0.7857143 0.1710945 0 0.9478257 0.745005 0.202821 5.8324e-04 9.9642e-01 noCoverage 4.4865e-02 1.0000e+00 noCoverage 7.9945e-02 9.7763e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.201601 0.14366081 lowCoverage 1.000000 lowCoverage chr20 35959857 35960857 152631 CTNNBL1 ENSG00000132792 0.891630 455 6 0.728351 168 3 0.539390 274 4 0.910933 333 5 0.635722 351 3 0.94239 476 8 0.664583 144 3 0.606579 143 3 0.583943 235 3 0.671050 255 3 0.668738 203 3 0.525537 277 3 0.639881 153 3 0.616606 55 3 0.653480 161 3 0.677716 386 3 0.755423 384 5 0.737396 384 8 0.703996 276 5 0.903449 406 9 0.638889 75 3 0.730159 70 3 0.780368 180 6 0.673148 116 3 0.880570 61 3 0.860078 158 6 0.659506 85 3 0.8024691 91 3 0.599020 94 3 0.705796 151 5 0.791594 116 5 0.912039 333 6 0.5913561 135 4 0.386275 84 3 0.4920732 345 5 0.667273 33 3 0.592014 199 3 0.5409923 256 5 0.7023473 475 5 0.785263 350 5 0.905441 343 5 0.632122 414 8 0.6700464 471 5 0.752717 0.615511 0.524083 0.897459 0.5990700 0.84617 0.632512 0.575758 0.5559288 0.634057 0.636152 0.493099 0.614224 0.591674 0.620657 0.638026 0.556245 0.761949 0.497660 0.832810 0.610837 0.716866 0.629417 0.642748 0.875938 0.620690 0.644218 0.782248 0.5699218 0.711599 0.703856 0.810205 0.6732467 0.3700956 0.1480792 0.45844156 0.5630664 0.3919246 0.583854 0.677495 0.822556 0.653080 0.5641084 3 0.553099 0.698496 -0.0585052 5 0.795721 0.852165 -0.0564440 0.658345 0.0342091 weaklyHypometh 1 1.00000 insignificant 0.50954 0.3524990 insignificant 1 1 insignificant -0.04996338 0.2226612 lowCoverage 1 lowCoverage 0.553099 0.4287072 0.1085221 5 0.795721 0.5960406 0.1996804 1.5591e-09 9.8076e-01 weaklyHypermeth 7.0866e-08 1.0000e+00 weaklyHypermeth 3.4727e-03 9.8551e-01 weaklyHypermeth 1.0214e-01 1.0000000 insignificant 0.1578425 8.1181e-03 lowCoverage 3.0067e-01 lowCoverage 0.552999 0.7613249 0.0839735 5 0.716149 0.6764894 0.0396595 3.1199e-07 4.5852e-02 weaklyHypermeth 1.5600e-05 1.0000e+00 weaklyHypermeth 3.4413e-04 8.9119e-01 weaklyHypermeth 1.4339e-02 1.0000e+00 weaklyHypermeth -0.0362042 5.3810e-01 lowCoverage 1.00000000 lowCoverage 0.698496 0.4287072 0.1934861 5 0.852165 0.5960406 0.2561244 7.4512e-06 9.8944e-01 weaklyHypermeth 2.4036e-04 1.0000e+00 weaklyHypermeth 4.2907e-03 0.99669765 weaklyHypermeth 1.1597e-01 1.00000 insignificant 0.20780593 1.6101e-03 lowCoverage 8.4743e-02 lowCoverage 0.698496 0.7616959 0.0665946 5 0.852165 0.751655 0.1005101 1.2388e-05 6.8994e-01 weaklyHypermeth 4.4242e-04 1.0000e+00 weaklyHypermeth 9.5512e-03 7.2441e-01 weaklyHypermeth 2.7683e-01 1.0000e+00 insignificant 0.0137592 8.1528e-01 lowCoverage 1.00000000 lowCoverage 0.4287072 0.7616959 -0.1425043 5 0.5960406 0.751655 -0.155614 9.2428e-01 2.7290e-03 weaklyHypometh 1.0000e+00 8.8032e-02 weaklyHypometh 9.3524e-01 2.7119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.194047 0.01447802 lowCoverage 0.526365 lowCoverage chr20 35977785 35978785 152635 VSTM2L ENSG00000132821 0.141809 346 9 0.011204 213 7 0.095624 155 7 0.073617 331 9 0.054545 102 7 0.12373 422 5 0.175034 229 7 0.036146 131 7 0.019175 133 7 0.044218 44 7 0.106494 250 7 0.047619 26 3 0.066667 29 3 0.027915 77 3 0.018634 73 3 0.062112 81 3 NA 0 0 0.180741 589 5 0.062127 243 7 0.153469 258 7 0.032565 94 3 0.000000 18 0 0.061905 101 3 0.134378 136 7 0.083409 220 7 0.208739 339 9 0.103284 86 3 0.0095238 66 7 0.086697 193 3 0.048306 319 7 0.068533 347 9 0.047543 257 4 0.1645101 131 7 0.112880 187 7 0.3334711 210 9 0.148370 67 6 0.084828 158 7 0.1272520 311 7 0.2074575 473 9 0.126770 307 9 0.198016 391 9 0.270541 600 5 0.2322714 337 9 0.156527 0.022579 0.155895 0.087311 0.1061295 0.13870 0.094030 0.069175 0.0483754 0.082792 0.186019 0.089646 0.062342 0.062642 0.037549 0.120224 NA 0.142320 0.047525 0.053144 0.063099 0.000000 0.043939 0.058178 0.159280 0.076232 0.085342 0.019192 0.1096390 0.041665 0.015324 0.121703 0.1134730 0.1748852 0.1534091 0.11811541 0.0836467 0.1318488 0.135293 0.064123 0.038142 0.073727 0.0625104 3 0.099490 0.078621 0.0205600 7 0.175900 0.184134 -0.0082340 0.478495 0.9548840 insignificant 1 1.00000 insignificant 0.35888 0.9761292 insignificant 1 1 insignificant 0.00525334 0.8007029 insignificant 1 insignificant 0.099569 0.1773585 -0.0531201 7 0.128670 0.2073200 -0.0786497 2.6050e-01 1.9969e-08 weaklyHypometh 1.0000e+00 4.9923e-06 weaklyHypometh 4.6254e-01 7.9630e-03 weaklyHypometh 1.0000e+00 0.6125359 insignificant -0.0828916 7.1428e-02 insignificant 1.0000e+00 insignificant 0.098949 0.0992403 0.0137860 7 0.178670 0.2369365 -0.0582663 9.2356e-02 5.8900e-06 inconclusive 1.0000e+00 1.9633e-03 inconclusive 2.8104e-01 8.8415e-06 inconclusive 1.0000e+00 2.9472e-03 inconclusive -0.1280178 2.5621e-03 weaklyHypometh 0.16013201 insignificant 0.078233 0.1796802 -0.0734461 7 0.126704 0.2793818 -0.1526778 8.5031e-01 3.2586e-05 weaklyHypometh 1.0000e+00 6.5172e-03 weaklyHypometh 9.7671e-01 0.00650123 weaklyHypometh 1.0000e+00 0.92875 insignificant -0.08814495 6.1097e-02 insignificant 1.0000e+00 insignificant 0.077808 0.1000949 -0.0074265 7 0.081249 0.306306 -0.2250564 7.7412e-01 7.0111e-04 weaklyHypometh 1.0000e+00 3.5056e-01 insignificant 9.3542e-01 1.6321e-05 weaklyHypometh 1.0000e+00 5.8447e-03 weaklyHypometh -0.1332711 1.6361e-03 weaklyHypometh 0.14873685 insignificant 0.1800189 0.0996678 0.0718476 9 0.3073200 0.236936 0.070383 1.4887e-01 9.9307e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3883e-01 9.6045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.045126 0.32557605 insignificant 1.000000 insignificant chr20 37114002 37115002 152682 ENSG00000219662 0.802065 193 7 0.831572 168 7 0.611825 94 5 0.772222 146 5 0.848589 96 7 0.83106 241 7 0.708657 116 6 0.778827 111 5 0.767040 101 6 0.759649 89 5 0.788187 179 7 0.781795 45 3 0.715581 111 5 0.973913 32 1 0.858081 83 4 0.628333 22 2 0.770833 60 3 0.534321 175 5 0.827910 124 7 0.857292 161 7 0.771825 48 4 0.633174 43 4 0.818571 68 6 0.786013 66 4 0.784242 37 4 0.761463 154 5 0.834542 121 6 0.7986395 38 4 0.758364 139 6 0.826766 159 4 0.827826 133 5 0.872103 210 5 0.4524069 85 4 0.446614 133 5 0.1548822 108 4 0.534747 48 4 0.710476 61 4 0.4396328 174 5 0.4310220 195 7 0.623451 155 7 0.380160 159 5 0.541567 172 5 0.4794025 158 5 0.780508 0.839530 0.608699 0.766377 0.8514714 0.80230 0.727257 0.786265 0.6934993 0.871350 0.824641 0.818763 0.698422 0.848911 0.823416 0.657899 0.730841 0.599341 0.803638 0.808274 0.743634 0.460897 0.810967 0.729086 0.825568 0.780724 0.755493 0.971528 0.7691214 0.803640 0.816712 0.881194 0.2921085 0.5194480 0.2603436 0.35528239 0.5632937 0.3505580 0.353717 0.411678 0.289456 0.472715 0.4568692 2 0.776451 0.796053 -0.0127075 6 0.797303 0.808069 -0.0107662 0.821317 0.1566844 insignificant 1 1.00000 insignificant 0.85386 0.1637716 insignificant 1 1 insignificant -0.01707280 0.5451699 lowCoverage 1 lowCoverage 0.776451 0.3957307 0.3616324 5 0.797303 0.4558854 0.3414177 1.4902e-20 9.8037e-01 hypermethylated 1.1463e-18 1.0000e+00 hypermethylated 1.6083e-05 9.3907e-01 hypermethylated 9.4605e-04 1.0000000 hypermethylated 0.3159281 6.4039e-03 lowCoverage 2.4630e-01 lowCoverage 0.776451 0.5113501 0.2590200 7 0.797303 0.5608910 0.2364120 1.6470e-17 8.9854e-01 hypermethylated 1.8300e-15 1.0000e+00 hypermethylated 2.3188e-07 8.8033e-01 hypermethylated 2.1080e-05 1.0000e+00 hypermethylated 0.2812673 8.8740e-04 hypermethylated 0.07395018 hypermethylated 0.796053 0.3957307 0.3680985 5 0.808069 0.4558854 0.3521840 8.7009e-15 9.9950e-01 hypermethylated 7.2507e-13 1.0000e+00 hypermethylated 7.2909e-06 0.99705752 hypermethylated 5.2078e-04 1.00000 hypermethylated 0.33300091 5.4139e-03 lowCoverage 2.3539e-01 lowCoverage 0.796053 0.5113501 0.2902840 6 0.808069 0.560891 0.2471783 4.3440e-13 9.8864e-01 hypermethylated 4.8266e-11 1.0000e+00 hypermethylated 2.8029e-06 9.9912e-01 hypermethylated 2.8029e-04 1.0000e+00 hypermethylated 0.2983402 9.7410e-04 lowCoverage 0.09740960 lowCoverage 0.3957307 0.5113501 -0.0813327 5 0.4558854 0.560891 -0.105006 5.1281e-01 1.8979e-02 weaklyHypometh 1.0000e+00 4.5187e-01 insignificant 9.5965e-01 4.5785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.034661 0.69400509 lowCoverage 1.000000 lowCoverage chr20 37204184 37205184 152695 ENSG00000219662 0.828372 157 7 0.782470 113 7 0.564114 175 7 0.688265 118 7 0.751701 60 7 0.62041 257 7 0.729379 86 7 0.889321 143 7 0.702760 99 7 0.780206 124 7 0.876551 282 7 0.752218 94 5 0.746847 240 7 0.806999 98 6 0.736240 152 7 0.213658 60 7 0.826333 48 2 0.656143 186 4 0.820959 232 6 0.719534 204 7 0.886673 97 7 0.545043 133 7 0.926354 135 6 0.817433 77 6 0.860675 65 4 0.784018 228 7 0.778101 316 7 0.6442866 86 5 0.767855 168 6 0.822453 261 7 0.783494 187 7 0.838889 276 7 0.3535079 177 7 0.152920 164 6 0.5714286 95 7 0.207962 58 4 0.406473 127 7 0.4252632 225 7 0.4148659 204 5 0.540248 199 5 0.341594 111 4 0.549041 110 4 0.3212774 185 5 0.783976 0.823968 0.532546 0.737356 0.8515455 0.74471 0.761033 0.880396 0.7863205 0.830028 0.900624 0.744476 0.731860 0.708687 0.814073 0.248814 0.844536 0.667629 0.827807 0.712344 0.901810 0.509633 0.871946 0.800461 0.849283 0.734527 0.778852 0.754325 0.7564281 0.769405 0.809203 0.862156 0.3672671 0.1567059 0.5368421 0.28789404 0.3570865 0.4090496 0.353331 0.498601 0.342302 0.622005 0.2748269 4 0.754781 0.783637 -0.0264201 7 0.646615 0.813756 -0.1671404 0.995499 0.1374386 insignificant 1 1.00000 insignificant 0.99848 0.0676209 insignificant 1 1 insignificant -0.06331577 0.1628629 insignificant 1 insignificant 0.754781 0.3486998 0.4098816 7 0.646615 0.4313597 0.2152555 4.2873e-24 1.0000e+00 hypermethylated 4.2873e-22 1.0000e+00 hypermethylated 1.0169e-09 9.9999e-01 hypermethylated 1.2217e-07 1.0000000 hypermethylated 0.3716982 7.6846e-04 hypermethylated 4.5204e-02 hypermethylated 0.755039 0.4029666 0.3512514 5 0.738989 0.4362903 0.3026986 6.7779e-20 7.8325e-01 hypermethylated 1.1297e-17 1.0000e+00 hypermethylated 3.2428e-09 6.5344e-01 hypermethylated 5.4046e-07 1.0000e+00 hypermethylated 0.2912185 9.7322e-04 lowCoverage 0.07486297 lowCoverage 0.783637 0.3486998 0.4376653 7 0.813756 0.4313597 0.3823959 1.6728e-22 1.0000e+00 hypermethylated 1.8586e-20 1.0000e+00 hypermethylated 9.6384e-10 1.00000000 hypermethylated 1.2367e-07 1.00000 hypermethylated 0.43501392 3.2785e-04 hypermethylated 2.3418e-02 hypermethylated 0.783531 0.4029666 0.3678686 5 0.787149 0.436290 0.3508590 4.4419e-19 9.5920e-01 hypermethylated 1.0617e-16 1.0000e+00 hypermethylated 6.9031e-10 9.0826e-01 hypermethylated 1.1505e-07 1.0000e+00 hypermethylated 0.3545343 3.4859e-04 lowCoverage 0.03873271 lowCoverage 0.3479290 0.4029666 -0.0638122 5 0.3501254 0.436290 -0.086165 5.8261e-01 2.2738e-03 weaklyHypometh 1.0000e+00 7.5792e-02 weaklyHypometh 7.7467e-01 5.4788e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.080480 0.33404885 lowCoverage 1.000000 lowCoverage chr20 37382033 37383033 152721 ENSG00000211534 0.899721 209 5 0.881540 219 5 0.849784 63 5 0.955603 135 5 0.907326 63 5 0.94248 315 5 0.901898 182 5 0.939394 124 5 0.866528 99 5 0.854762 32 4 0.912358 271 5 0.909524 28 4 0.971569 61 5 0.900000 31 4 0.905050 76 4 1.000000 25 2 1.000000 140 1 0.882631 110 5 0.912335 224 5 0.944040 334 5 0.800000 34 4 1.000000 2 0 0.769095 145 5 1.000000 43 2 0.954023 33 1 0.915317 308 5 0.959048 63 5 0.8916667 53 5 0.955802 199 5 0.975610 286 5 0.940280 278 5 0.905407 218 5 0.8454864 189 5 0.637436 122 5 0.4183333 234 5 1.000000 27 1 0.856790 244 5 0.7795995 333 5 0.9430413 425 5 0.952682 238 5 0.958425 145 5 0.895619 200 5 0.9464184 171 5 0.874629 0.849760 0.829227 0.960143 0.9062535 0.92502 0.885261 0.925961 0.8526880 0.855302 0.901551 0.892980 0.969881 0.876289 0.901693 1.000000 NA 0.886439 0.904630 0.936688 0.789691 0.935141 0.939370 1.000000 0.939071 0.916974 0.951105 0.843814 0.9562725 0.972341 0.923230 0.912145 0.8203716 0.5906247 0.3203731 NA 0.8579702 0.7765875 0.944289 0.961397 0.957479 0.881925 0.9472590 2 0.910252 0.937387 -0.0275119 5 0.947185 0.835908 0.1112768 0.976400 0.0202033 weaklyHypometh 1 1.00000 insignificant 0.95951 0.0460588 weaklyHypometh 1 1 insignificant -0.00535999 0.8195529 lowCoverage 1 lowCoverage 0.910055 0.7345518 0.1858471 5 0.915495 0.7407905 0.1747049 2.6612e-08 1.0000e+00 weaklyHypermeth 1.0296e-06 1.0000e+00 weaklyHypermeth 1.1195e-04 9.9992e-01 weaklyHypermeth 5.3311e-03 1.0000000 weaklyHypermeth 0.1605531 1.1096e-01 lowCoverage 1.0000e+00 lowCoverage 0.910055 0.9423240 -0.0313623 5 0.915495 0.9387798 -0.0232845 9.5619e-01 8.9290e-03 weaklyHypometh 1.0000e+00 9.9211e-01 insignificant 9.8558e-01 3.3930e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0224098 1.5721e-01 lowCoverage 1.00000000 lowCoverage 0.937839 0.7345518 0.2151807 5 0.937453 0.7407905 0.1966620 3.6764e-06 1.0000e+00 hypermethylated 1.2255e-04 1.0000e+00 hypermethylated 3.5675e-05 0.99993291 hypermethylated 1.8776e-03 1.00000 hypermethylated 0.16591310 1.0352e-01 lowCoverage 1.0000e+00 lowCoverage 0.937839 0.9423240 -0.0027254 5 0.937453 0.938780 -0.0013273 7.6331e-01 4.7369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1348e-01 7.3314e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0170498 4.8564e-01 lowCoverage 1.00000000 lowCoverage 0.7345518 0.9423240 -0.2171022 5 0.7407905 0.938780 -0.197989 9.9996e-01 2.0376e-03 weaklyHypometh 1.0000e+00 7.0261e-02 weaklyHypometh 1.0000e+00 1.5716e-04 hypomethylated 1.0000e+00 1.2089e-02 hypomethylated -0.182963 0.07856346 lowCoverage 1.000000 lowCoverage chr20 40075617 40076617 153016 ENSG00000220309 0.68296 210 5 0.69021 199 5 0.73175 123 5 0.93143 135 5 0.65212 59 5 0.69898 221 5 0.68470 101 5 0.81314 63 5 0.69294 54 5 0.82440 42 5 0.86588 199 5 0.85197 57 5 0.68565 72 4 0.61111 14 1 0.75312 86 5 0.68000 23 4 0.85881 70 4 0.71820 191 5 0.82200 118 5 0.80089 247 5 0.98000 37 4 0.91182 30 2 0.88609 138 5 0.69090 89 3 0.92063 52 3 0.67778 181 5 0.73993 53 3 0.78182 42 3 0.87758 81 5 0.83668 203 5 0.80176 209 5 0.81622 249 5 0.659415 142 5 0.527808 99 5 0.742672 213 5 0.840635 53 5 0.660290 118 4 0.800706 195 5 0.87692 251 5 0.87285 210 5 0.84868 244 5 0.87999 248 5 0.89503 204 5 0.83714 0.86763 0.72017 0.93697 0.81746 0.86468 0.84993 0.86203 0.75276 0.84804 0.90443 0.92473 0.84409 0.87152 0.93540 0.69801 0.90603 0.89837 0.87325 0.84548 0.96623 0.916315 0.92681 0.75182 0.88143 0.83757 0.76687 0.80674 0.93036 0.86992 0.85270 0.82868 0.692521 0.546165 0.759058 0.8346578 0.627709 0.8440631 0.898217 0.90045 0.869078 0.91139 0.91519 3 0.85114 0.85997 0.00421297 5 0.70913 0.69051 0.01862160 3.0152e-01 0.74022788 insignificant 1.00000000 1.00000 insignificant 0.3854381 0.6700452 insignificant 1 1 insignificant -0.0742541 0.036372 lowCoverage 1 lowCoverage 0.85664 0.670732 0.176995 5 0.82742 0.708829 0.1185937 2.6287e-12 0.726625 weaklyHypermeth 1.2518e-10 1 weaklyHypermeth 1.8375e-06 0.953737 weaklyHypermeth 1.2250e-04 1 weaklyHypermeth 0.047258 3.7895e-01 lowCoverage 1.0000e+00 lowCoverage 0.85664 0.88581 -0.0298474 5 0.82742 0.87054 -0.04311219 8.9291e-01 0.09118153 insignificant 1.0000e+00 1.000000 insignificant 8.1802e-01 0.16716487 insignificant 1.0000e+00 1.000000 insignificant -0.1221789 5.8400e-06 lowCoverage 0.0057071 lowCoverage 0.86060 0.670732 0.167815 5 0.82861 0.708829 0.1197772 1.2485e-06 0.67246115 weaklyHypermeth 3.2014e-05 1.00000 weaklyHypermeth 9.7817e-05 0.988383 weaklyHypermeth 3.9127e-03 1 weaklyHypermeth 0.1215125 5.1375e-02 lowCoverage 8.1548e-01 lowCoverage 0.86060 0.88581 -0.0377713 5 0.82861 0.87054 -0.0419287 9.7399e-01 1.9062e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.3470e-01 0.152363 insignificant 1.0000000 1 insignificant -0.047925 0.11252837 lowCoverage 1.00000 lowCoverage 0.6707317 0.88581 -0.227469 5 0.708829 0.87054 -0.16170593 9.9969e-01 1.1017e-05 hypomethylated 1.0000e+00 5.0079e-04 hypomethylated 9.9997e-01 1.2275e-05 hypomethylated 1.0000000 1.5343e-03 hypomethylated -0.1694372 1.4108e-02 lowCoverage 3.9510e-01 lowCoverage chr20 40629316 40630316 153084 ENSG00000220309 0.86451 107 5 0.71052 94 5 0.69722 43 5 0.82133 112 5 0.90556 40 5 0.80995 128 5 0.80000 40 4 0.81804 63 5 0.85595 35 5 0.75000 49 5 0.77516 166 5 0.93333 7 0 0.85576 53 5 0.78222 41 5 0.73590 37 5 0.60000 13 0 0.80000 11 0 0.81948 66 5 0.99200 52 5 0.78609 124 5 0.95000 25 2 1.00000 16 1 0.73636 53 5 0.88333 19 1 0.83333 31 5 0.80185 126 5 0.82381 31 5 0.66667 19 1 0.77333 55 5 0.85758 72 5 0.66938 113 5 0.76979 157 5 0.743708 86 5 0.507576 57 5 0.613871 75 5 0.625000 6 0 0.741667 40 5 0.740292 112 5 0.81626 85 5 0.85972 87 5 0.86488 97 5 0.75119 40 5 0.87169 141 5 0.85030 0.67685 0.72928 0.84153 0.92259 0.82688 0.83607 0.83187 0.85939 0.75000 0.77964 0.88525 0.88177 0.78543 0.75578 0.67213 0.83607 0.81769 0.98623 0.80827 0.95902 1.000000 0.74784 0.88934 0.86339 0.79430 0.72678 0.69672 0.75410 0.87506 0.69621 0.79743 0.742470 0.461128 0.673482 0.6953696 0.765710 0.7270156 0.843386 0.88502 0.882567 0.73595 0.86709 0 0.80640 0.78801 0.01890717 5 0.80188 0.78218 0.01969625 3.0350e-01 0.67438735 insignificant 1.00000000 1.00000 insignificant 0.7041658 0.2840924 insignificant 1 1 insignificant -0.0081345 0.818895 lowCoverage 1 lowCoverage 0.80640 0.680851 0.126418 5 0.80188 0.676677 0.1251997 5.5264e-05 0.999998 weaklyHypermeth 9.0596e-04 1 weaklyHypermeth 9.8474e-04 0.999946 weaklyHypermeth 2.2901e-02 1 weaklyHypermeth 0.143632 1.2250e-02 lowCoverage 3.1410e-01 lowCoverage 0.80640 0.85778 -0.0506039 5 0.80188 0.85195 -0.05007755 9.7678e-01 0.03490305 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.6001e-01 0.33301052 insignificant 1.0000e+00 1.000000 insignificant -0.0270992 3.8256e-01 lowCoverage 1.0000000 lowCoverage 0.78801 0.680851 0.107396 5 0.78218 0.676677 0.1055035 2.2884e-03 0.99971367 weaklyHypermeth 3.1348e-02 1.00000 weaklyHypermeth 1.3646e-03 0.999934 weaklyHypermeth 3.0325e-02 1 weaklyHypermeth 0.1517664 1.0746e-02 lowCoverage 2.6865e-01 lowCoverage 0.78801 0.85778 -0.0696412 5 0.78218 0.85195 -0.0697738 9.8764e-01 4.6504e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 5.8496e-01 0.635527 insignificant 1.0000000 1 insignificant -0.018965 0.61546747 lowCoverage 1.00000 lowCoverage 0.6808511 0.85778 -0.177423 5 0.676677 0.85195 -0.17527728 1.0000e+00 2.0633e-04 weaklyHypometh 1.0000e+00 6.4479e-03 weaklyHypometh 9.9979e-01 2.9535e-03 weaklyHypometh 1.0000000 1.1814e-01 insignificant -0.1707311 5.8773e-03 lowCoverage 2.5139e-01 lowCoverage chr20 40841346 40842346 153110 ENSG00000217390 0.96129 266 5 0.91699 265 5 0.74444 40 4 0.95923 132 5 0.80000 14 0 0.95254 366 5 0.78667 26 5 0.94000 84 5 0.82667 23 4 1.00000 24 4 0.92062 205 5 0.00000 1 0 0.90066 59 5 0.95325 39 5 1.00000 10 0 NA 0 0 0.66667 3 0 0.95031 259 5 0.95760 167 5 0.95508 225 5 0.83333 21 1 0.65000 17 0 0.98947 44 5 1.00000 42 5 0.73684 38 1 0.95443 264 5 0.83879 30 3 1.00000 10 0 0.97447 94 5 0.96473 306 5 0.89748 291 5 0.93632 252 5 0.686051 127 5 0.735088 50 1 0.000000 12 1 1.000000 10 1 0.721071 136 5 0.881846 211 5 0.91135 71 5 0.89493 136 5 0.86469 205 5 0.92051 94 1 0.84754 93 5 0.95391 0.90798 0.75926 0.98077 0.76190 0.94635 0.78413 0.95238 0.83175 0.92760 0.92231 NA 0.90895 0.97155 1.00000 NA 0.68517 0.94085 0.95860 0.95807 1.00000 0.583333 0.98747 1.00000 NA 0.95653 0.87157 0.95006 0.96960 0.96119 0.88410 0.94233 0.689743 0.748120 NA 1.0000000 0.715561 0.8708848 0.894461 0.90666 0.881250 0.90537 0.84231 0 0.91984 0.92898 0.00419047 5 0.93905 0.93836 0.00068134 5.8539e-01 0.47860238 insignificant 1.00000000 1.00000 insignificant 0.9067518 0.1314250 insignificant 1 1 insignificant -0.0457774 0.460288 lowCoverage 1 lowCoverage 0.91984 0.699634 0.222614 5 0.93905 0.776808 0.1622371 8.6372e-12 1.000000 hypermethylated 3.8001e-10 1 hypermethylated 3.4735e-03 0.999862 weaklyHypermeth 6.8107e-02 1 weaklyHypermeth 0.181536 2.7399e-01 lowCoverage 1.0000e+00 lowCoverage 0.91984 0.76628 0.1096244 5 0.93905 0.87586 0.06318937 2.0564e-04 0.97196735 weaklyHypermeth 1.4688e-02 1.000000 weaklyHypermeth 1.0641e-01 0.90848983 insignificant 1.0000e+00 1.000000 insignificant -0.0355929 5.1427e-01 lowCoverage 1.0000000 lowCoverage 0.92898 0.699634 0.212060 5 0.93836 0.776808 0.1615558 6.8924e-10 1.00000000 hypermethylated 3.2821e-08 1.00000 hypermethylated 1.3461e-03 0.999992 weaklyHypermeth 3.0325e-02 1 weaklyHypermeth 0.2273130 1.7524e-01 lowCoverage 1.0000e+00 lowCoverage 0.92898 0.76628 0.0916146 5 0.93836 0.87586 0.0625080 1.7029e-03 9.9582e-01 weaklyHypermeth 8.9626e-02 1.000000 weaklyHypermeth 9.8247e-02 0.985386 insignificant 1.0000000 1 insignificant 0.010184 0.77721559 lowCoverage 1.00000 lowCoverage 0.6996337 0.76628 -0.163958 5 0.776808 0.87586 -0.09904775 9.9978e-01 4.8328e-03 weaklyHypometh 1.0000e+00 8.6300e-02 weaklyHypometh 9.9948e-01 4.7147e-02 weaklyHypometh 1.0000000 7.1435e-01 insignificant -0.2171285 1.8893e-01 lowCoverage 1.0000e+00 lowCoverage chr20 40841529 40842529 153111 ENSG00000217390 0.93440 306 6 0.88916 293 6 0.68900 57 5 0.94716 185 6 0.66667 15 0 0.90798 420 6 0.75556 41 6 0.91354 116 6 0.79495 34 5 0.95714 38 5 0.88623 233 6 0.00000 4 0 0.89499 89 6 0.94318 67 6 0.97701 39 1 1.00000 5 1 0.66667 3 0 0.90981 300 6 0.94434 208 6 0.92368 255 6 0.78571 27 2 0.63542 33 1 0.98365 66 6 1.00000 52 6 0.86842 50 2 0.93702 304 6 0.81010 60 4 0.97143 24 1 0.92788 153 6 0.96394 356 6 0.86756 330 6 0.91795 275 6 0.610598 157 6 0.624919 77 2 0.500000 38 2 0.875000 14 1 0.622822 174 6 0.796777 246 6 0.87612 101 6 0.87077 168 6 0.84024 244 6 0.90907 121 2 0.85571 122 6 0.86877 0.82059 0.56703 0.92878 0.34043 0.80187 0.68227 0.85771 0.72366 0.84911 0.80723 0.32278 0.88556 0.92802 0.92370 NA 0.68537 0.81166 0.91404 0.85219 0.72340 0.571809 0.96926 1.00000 0.95750 0.89760 0.75822 0.89866 0.81765 0.96053 0.79219 0.87802 0.437261 0.375244 0.856821 0.5851064 0.392507 0.5945899 0.786887 0.82000 0.790913 0.87577 0.87232 1 0.89217 0.90515 -0.00293469 6 0.91087 0.91541 -0.00453606 6.9608e-01 0.43135771 insignificant 1.00000000 1.00000 insignificant 0.9534611 0.1029669 insignificant 1 1 insignificant -0.0590163 0.316147 lowCoverage 1 lowCoverage 0.89217 0.617564 0.267848 6 0.91087 0.703590 0.2072809 1.0318e-14 1.000000 hypermethylated 6.0696e-13 1 hypermethylated 1.0475e-03 0.999984 weaklyHypermeth 2.3806e-02 1 weaklyHypermeth 0.158388 5.3195e-02 lowCoverage 9.0161e-01 lowCoverage 0.89217 0.76852 0.0811623 6 0.91087 0.85939 0.05147947 4.7856e-04 0.96056085 weaklyHypermeth 2.9910e-02 1.000000 weaklyHypermeth 1.6744e-01 0.86790071 insignificant 1.0000e+00 1.000000 insignificant -0.0403081 4.3529e-01 lowCoverage 1.0000000 lowCoverage 0.90515 0.617564 0.270235 6 0.91541 0.703590 0.2118170 4.7886e-12 1.00000000 hypermethylated 2.9929e-10 1.00000 hypermethylated 1.6188e-04 1.000000 hypermethylated 5.5819e-03 1 hypermethylated 0.2174045 9.2574e-03 lowCoverage 2.3737e-01 lowCoverage 0.90515 0.76852 0.0716075 6 0.91541 0.85939 0.0560155 2.6365e-03 9.9570e-01 weaklyHypermeth 1.1463e-01 1.000000 insignificant 1.2804e-01 0.985253 insignificant 1.0000000 1 insignificant 0.018708 0.57220958 lowCoverage 1.00000 lowCoverage 0.6175637 0.76852 -0.242564 6 0.703590 0.85939 -0.15580147 9.9998e-01 5.7379e-04 hypomethylated 1.0000e+00 1.5100e-02 hypomethylated 9.9993e-01 1.5409e-02 weaklyHypometh 1.0000000 3.9510e-01 insignificant -0.1986962 1.5804e-02 lowCoverage 3.9510e-01 lowCoverage chr20 41966005 41967005 153209 ENSG00000206801 0.47030 383 7 0.52580 127 5 0.46886 123 7 0.39853 361 7 0.50406 78 7 0.35706 268 7 0.53492 69 5 0.39924 174 7 0.46330 146 7 0.49956 135 7 0.68485 191 7 0.47678 90 7 0.33237 218 7 0.32828 38 4 0.31362 120 7 0.63194 82 7 0.27747 106 7 0.36216 394 7 0.28648 112 7 0.29223 230 7 0.37085 71 4 0.07703 228 7 0.49771 181 7 0.27744 109 7 0.28413 57 5 0.48820 224 7 0.23734 62 4 0.38923 44 7 0.55177 169 7 0.44655 197 5 0.32466 243 7 0.55567 256 7 0.492166 154 7 0.702031 109 7 0.000000 3 0 0.265657 30 3 0.628810 52 5 0.291779 204 7 0.04795 546 7 0.13225 257 5 0.10079 403 7 0.13798 422 7 0.23328 516 7 0.46420 0.53465 0.45147 0.33014 0.50337 0.31751 0.56503 0.38367 0.42434 0.42543 0.66559 0.41546 0.32037 0.42734 0.26006 0.64363 0.27804 0.33623 0.23279 0.22948 0.45039 0.048139 0.52233 0.27413 0.28153 0.45170 0.26608 0.36216 0.53986 0.42404 0.28826 0.52032 0.456265 0.638755 NA 0.4034842 0.623758 0.3092942 0.026039 0.11013 0.078668 0.13803 0.09126 2 0.43135 0.42586 0.00308143 7 0.41383 0.36964 0.04418846 5.1794e-01 0.79730696 insignificant 1.00000000 1.00000 insignificant 0.2344906 0.6570958 insignificant 1 1 insignificant 0.0553434 0.268982 insignificant 1 insignificant 0.43152 0.452899 -0.020496 7 0.42533 0.460590 -0.0352647 2.5171e-01 0.020677 weaklyHypometh 1.0000e+00 1 insignificant 4.7617e-01 0.037314 weaklyHypometh 1.0000e+00 1 insignificant 0.033650 7.7030e-01 lowCoverage 1.0000e+00 lowCoverage 0.43135 0.10168 0.3271984 7 0.41383 0.15787 0.25595904 1.7490e-20 0.99998740 hypermethylated 1.7490e-17 1.000000 hypermethylated 6.3986e-13 0.99999901 hypermethylated 6.3986e-10 1.000000 hypermethylated 0.2999407 1.3336e-05 hypermethylated 0.0057071 hypermethylated 0.42632 0.452899 -0.019698 7 0.42244 0.460590 -0.0381467 6.0609e-01 0.09742446 insignificant 1.0000e+00 1.00000 insignificant 5.2528e-01 0.051088 insignificant 1.0000e+00 1 insignificant -0.0216930 8.5541e-01 lowCoverage 1.0000e+00 lowCoverage 0.42586 0.10168 0.3248868 7 0.36964 0.15787 0.2117706 5.2719e-11 9.9971e-01 hypermethylated 5.2719e-08 1.000000 hypermethylated 1.4475e-06 0.997285 hypermethylated 0.0014475 1 hypermethylated 0.244597 0.00026852 hypermethylated 0.26852 insignificant 0.4528986 0.10131 0.351674 7 0.460590 0.10899 0.35159883 4.1772e-11 1.0000e+00 hypermethylated 4.1772e-08 1.0000e+00 hypermethylated 6.3519e-06 1.0000e+00 hypermethylated 0.0063519 1.0000e+00 hypermethylated 0.2662903 5.4776e-02 lowCoverage 1.0000e+00 lowCoverage chr20 42469166 42470166 153226 HNF4A ENSG00000101076 0.94376 190 4 0.88522 154 5 0.66939 160 5 0.92333 76 4 0.83610 64 5 0.89504 237 5 0.89556 98 5 0.88142 159 5 0.81619 112 5 0.89399 125 5 0.88300 223 5 0.89232 65 5 0.89907 160 5 1.00000 16 2 0.91393 125 5 0.88333 35 4 0.77143 48 4 0.89127 97 4 0.90598 80 4 0.86705 166 5 0.86600 72 5 0.89697 65 5 0.88429 157 4 0.90701 61 5 0.91962 36 4 0.92149 170 5 0.85917 91 5 0.90833 46 5 0.80462 111 4 0.94619 218 5 0.89710 233 5 0.94603 225 5 0.860833 126 5 0.993103 99 4 1.000000 184 3 0.812500 32 2 0.845933 69 3 0.942099 172 5 0.92551 210 4 0.91061 212 5 0.89987 114 4 0.88000 112 4 0.92266 118 4 0.94961 0.85996 0.66988 0.96526 0.85916 0.90957 0.89935 0.89973 0.82252 0.90984 0.88139 0.86754 0.87914 0.92809 0.87632 0.80572 0.83934 0.87629 0.87733 0.87794 0.85116 0.867348 0.89635 0.87886 0.90601 0.91452 0.85723 0.91817 0.81656 0.94349 0.87083 0.95188 0.875097 0.995430 0.982907 0.7302252 0.891993 0.9435268 0.900754 0.92223 0.891635 0.89044 0.89921 3 0.87615 0.91178 -0.03565982 5 0.87684 0.91596 -0.03911773 9.9767e-01 0.00671264 weaklyHypometh 1.00000000 1.00000 insignificant 0.9505705 0.0766197 insignificant 1 1 insignificant -0.0190309 0.321342 lowCoverage 1 lowCoverage 0.87615 0.922287 -0.045336 5 0.87684 0.912167 -0.0353235 7.6914e-01 0.015330 weaklyHypometh 1.0000e+00 1 insignificant 9.6542e-01 0.013150 weaklyHypometh 1.0000e+00 1 insignificant -0.031708 4.0638e-01 lowCoverage 1.0000e+00 lowCoverage 0.87615 0.90470 -0.0270499 4 0.87684 0.91135 -0.03451037 9.7289e-01 0.09172215 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5485e-01 0.08588883 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0303574 9.0456e-02 lowCoverage 1.0000000 lowCoverage 0.91178 0.922287 -0.012248 5 0.91596 0.912167 0.0037942 2.8756e-01 0.26770324 insignificant 1.0000e+00 1.00000 insignificant 9.0785e-01 0.108692 insignificant 1.0000e+00 1 insignificant -0.0126773 7.2638e-01 lowCoverage 1.0000e+00 lowCoverage 0.91178 0.90470 0.0076501 4 0.91596 0.91135 0.0046074 5.7488e-01 7.0751e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.3408e-01 0.372790 lowCoverage 1.0000000 1 lowCoverage -0.011326 0.43559311 lowCoverage 1.00000 lowCoverage 0.9222874 0.90470 0.033666 4 0.912167 0.91135 0.00081317 2.0691e-01 6.2797e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.9067e-01 6.4406e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0013508 9.6943e-01 lowCoverage 1.0000e+00 lowCoverage chr20 44252184 44253184 153273 CD40 ENSG00000101017 0.85038 206 5 0.81806 193 5 0.77146 212 5 0.93712 64 4 0.95785 92 4 0.71817 123 4 0.75060 181 4 0.88030 124 4 0.78304 163 4 0.91616 104 4 0.90616 157 4 0.88117 152 4 0.77158 149 4 NA 0 0 0.83771 110 4 0.77101 94 4 0.82405 99 4 0.90856 85 5 0.92572 128 4 0.78964 201 5 0.79201 96 4 0.78942 45 4 0.93358 122 5 0.89128 90 4 0.85187 31 4 0.93258 143 5 0.86288 95 4 0.88661 85 4 0.86255 118 4 0.94316 210 5 0.87637 135 5 0.87009 222 5 0.468906 198 5 0.437657 98 4 0.980769 62 4 0.617045 40 3 0.785809 96 4 0.372712 194 5 0.78792 173 5 0.86581 212 4 0.88517 91 4 0.75930 191 4 0.85056 101 4 0.88917 0.83290 0.78413 0.92659 0.95608 0.91296 0.75966 0.89575 0.79268 0.91239 0.90572 0.88302 0.77940 NA 0.83638 0.79083 0.83031 0.88134 0.92774 0.85805 0.74564 0.811074 0.96246 0.90434 0.84907 0.94238 0.86347 0.91154 0.83322 0.94932 0.90532 0.90265 0.593070 0.417217 0.984228 0.6243787 0.737263 0.2428263 0.726279 0.84094 0.876527 0.77726 0.81271 4 0.84793 0.88769 -0.04197365 5 0.82504 0.87847 -0.05342722 9.9890e-01 0.00932486 weaklyHypometh 1.00000000 1.00000 insignificant 0.9658323 0.0993340 insignificant 1 1 insignificant -0.0323282 0.148333 lowCoverage 1 lowCoverage 0.84793 0.536443 0.311771 5 0.82504 0.545286 0.2797571 3.3354e-13 0.999999 hypermethylated 1.7555e-11 1 hypermethylated 1.1881e-04 0.999728 hypermethylated 3.7129e-03 1 hypermethylated 0.231555 5.9817e-02 lowCoverage 9.6479e-01 lowCoverage 0.84793 0.79688 0.0479067 4 0.82504 0.82515 -0.00010213 1.6982e-02 0.26052719 lowCoverage 6.7928e-01 1.000000 lowCoverage 3.2449e-02 0.55390514 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0122875 6.8352e-01 lowCoverage 1.0000000 lowCoverage 0.88793 0.536337 0.354325 5 0.89873 0.537738 0.3609869 1.2041e-11 0.99999994 hypermethylated 7.0831e-10 1.00000 hypermethylated 4.2177e-05 1.000000 hypermethylated 1.8758e-03 1 hypermethylated 0.2638830 3.9461e-02 lowCoverage 6.7597e-01 lowCoverage 0.88769 0.79688 0.0884715 4 0.87847 0.82515 0.0533251 4.6664e-04 8.2181e-01 lowCoverage 3.3792e-02 1.000000 lowCoverage 1.0996e-02 0.648724 lowCoverage 0.5787276 1 lowCoverage 0.044616 0.15399257 lowCoverage 1.00000 lowCoverage 0.5364431 0.79688 -0.264765 4 0.545286 0.82515 -0.27985919 9.9990e-01 6.8843e-05 lowCoverage 1.0000e+00 2.6478e-03 lowCoverage 9.8512e-01 2.3388e-03 lowCoverage 1.0000000 9.7450e-02 lowCoverage -0.2192673 7.0819e-02 lowCoverage 1.0000e+00 lowCoverage chr20 44990598 44991598 153309 EYA2 ENSG00000064655 0.52633 197 8 0.61476 281 8 0.73369 175 8 0.67757 152 7 0.70539 144 8 0.72437 235 8 0.63494 197 8 0.72934 151 8 0.57273 165 8 0.73828 100 6 0.66453 126 6 0.78115 71 6 0.59420 158 8 0.80032 59 5 0.58112 171 8 0.51894 42 4 0.65033 39 4 0.65914 192 8 0.63382 178 6 0.51802 260 8 0.66478 130 8 0.19508 78 5 0.76325 212 8 0.79590 70 6 0.38782 43 1 0.55753 381 8 0.57239 99 8 0.62803 43 4 0.46643 99 6 0.53485 304 8 0.60113 219 8 0.82853 248 8 0.082921 293 8 0.133523 82 5 0.125000 168 8 0.446667 20 2 0.145976 223 8 0.442385 257 8 0.42745 263 8 0.68555 306 6 0.72981 263 6 0.79188 220 6 0.47829 180 7 0.46512 0.56628 0.65621 0.56433 0.56783 0.63954 0.51112 0.62862 0.45549 0.55935 0.58341 0.70154 0.45233 0.64105 0.46534 0.38431 0.53157 0.55515 0.58402 0.44233 0.50161 0.228680 0.67309 0.64580 0.36990 0.45008 0.49251 0.58264 0.45570 0.42111 0.48906 0.72894 0.103016 0.122475 0.098765 0.5237327 0.125258 0.3089052 0.328737 0.54324 0.530289 0.64654 0.37554 2 0.58635 0.55815 0.04108624 8 0.64900 0.60542 0.04357963 9.7051e-02 0.98730312 insignificant 1.00000000 1.00000 insignificant 0.1108703 0.9966572 insignificant 1 1 insignificant 0.0699724 0.224172 insignificant 1 insignificant 0.58635 0.185043 0.438806 8 0.64900 0.193290 0.4557086 7.6789e-32 1.000000 hypermethylated 1.0970e-29 1 hypermethylated 6.4610e-13 1.000000 hypermethylated 1.0768e-10 1 hypermethylated 0.423537 1.1488e-03 weaklyHypermeth 4.7865e-02 weaklyHypermeth 0.58635 0.49594 0.0772568 6 0.64900 0.58416 0.06484279 2.5256e-03 0.78499852 weaklyHypermeth 1.4142e-01 1.000000 insignificant 3.5685e-02 0.82359893 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0303519 7.0103e-01 insignificant 1.0000000 insignificant 0.55815 0.185043 0.398233 8 0.60542 0.193290 0.4121289 1.9167e-16 1.00000000 hypermethylated 1.7425e-14 1.00000 hypermethylated 1.8797e-07 1.000000 hypermethylated 2.3497e-05 1 hypermethylated 0.3535643 1.8017e-03 weaklyHypermeth 6.9298e-02 weaklyHypermeth 0.55815 0.49594 0.0469902 6 0.60542 0.58416 0.0212632 3.5262e-01 7.2271e-01 insignificant 1.0000e+00 1.000000 insignificant 6.4194e-01 0.609958 insignificant 1.0000000 1 insignificant -0.039621 0.66546643 insignificant 1.00000 insignificant 0.1850431 0.49594 -0.389016 6 0.193290 0.58416 -0.39086577 1.0000e+00 2.2340e-08 hypomethylated 1.0000e+00 1.7184e-06 hypomethylated 1.0000e+00 8.2314e-06 hypomethylated 1.0000000 1.1759e-03 hypomethylated -0.3931848 3.4637e-03 weaklyHypometh 1.7888e-01 insignificant chr20 47499836 47500836 153366 SNORD12 ENSG00000212304 0.90901 159 5 0.69481 173 5 0.68737 66 5 0.98072 91 2 0.91111 45 5 0.89452 224 5 0.94000 37 3 0.89573 80 5 0.94286 23 2 0.96667 21 3 0.87562 219 5 0.96000 19 2 0.83146 62 5 0.92727 32 2 0.91212 46 5 1.00000 8 0 NA 0 0 0.90578 128 2 0.83420 55 2 0.93299 128 5 0.93333 19 2 0.75000 16 0 0.84111 65 5 0.94133 96 5 1.00000 2 0 0.88059 172 5 0.88667 28 5 0.95682 26 2 0.80833 88 5 0.93498 176 5 0.84691 141 5 0.92640 169 5 0.795470 105 5 0.750000 11 2 0.700669 273 3 0.600000 5 0 0.914402 124 5 0.527839 120 5 0.67464 50 2 0.96667 39 2 0.98000 69 2 1.00000 33 2 0.63333 40 2 0.91985 0.69310 0.75236 0.97034 0.88319 0.91058 0.96154 0.91935 0.91209 0.97863 0.88420 0.93846 0.77498 0.88811 0.91375 0.96057 NA 0.85505 0.83467 0.92999 0.89744 0.750000 0.88020 0.93368 0.96470 0.87152 0.85556 0.93357 0.77244 0.91433 0.82377 0.92107 0.768179 0.725741 0.730206 0.5641026 0.896178 0.6651169 0.678935 0.94872 0.969231 1.00000 0.61538 0 0.86510 0.87876 -0.01101262 5 0.86457 0.89083 -0.02626073 7.8626e-01 0.04972665 weaklyHypometh 1.00000000 1.00000 insignificant 0.5873856 0.6979155 insignificant 1 1 insignificant 0.0026486 0.925493 lowCoverage 1 lowCoverage 0.86510 0.747649 0.090849 5 0.86457 0.755232 0.1093393 7.4784e-04 0.836013 weaklyHypermeth 1.0449e-02 1 weaklyHypermeth 3.1182e-02 0.972668 weaklyHypermeth 4.1029e-01 1 insignificant 0.180125 2.2588e-02 lowCoverage 4.7058e-01 lowCoverage 0.86510 0.83550 0.0298523 2 0.86457 0.83516 0.02941245 2.5980e-01 0.89745905 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.8968e-01 0.83797956 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0439266 6.2229e-01 lowCoverage 1.0000000 lowCoverage 0.87876 0.747649 0.114040 5 0.89083 0.755232 0.1356000 1.4711e-04 0.92874069 weaklyHypermeth 2.4518e-03 1.00000 weaklyHypermeth 1.1295e-01 0.972033 insignificant 1.0000e+00 1 insignificant 0.1774763 2.3938e-02 lowCoverage 4.7877e-01 lowCoverage 0.87876 0.83550 0.0248412 2 0.89083 0.83516 0.0556732 8.1070e-02 9.8290e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.9449e-01 0.807798 lowCoverage 1.0000000 1 lowCoverage 0.041278 0.64366039 lowCoverage 1.00000 lowCoverage 0.7476489 0.83550 -0.029339 2 0.755232 0.83516 -0.07992685 7.9022e-01 1.3594e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7510e-01 1.7777e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.1361983 2.0743e-01 lowCoverage 1.0000e+00 lowCoverage chr20 48035231 48036231 153376 SNAI1 ENSG00000124216 0.61667 32 4 0.76588 116 6 0.86111 28 4 0.75000 8 0 0.76667 32 3 0.94583 39 5 0.72201 54 4 0.74838 69 6 0.48611 26 3 0.70664 66 6 0.82618 178 6 0.60086 63 6 0.76830 175 6 NA 0 0 0.75000 42 6 0.39583 36 4 0.83333 18 0 0.88333 20 2 0.94586 132 6 0.81667 31 4 0.82236 52 4 NA 0 0 0.72778 24 2 0.94444 12 0 0.75000 4 0 0.90230 132 6 0.55556 19 0 0.80000 5 0 0.84463 145 6 0.87661 186 6 0.93442 167 6 0.93333 38 6 0.242439 103 6 0.074306 120 6 0.247074 214 6 0.250000 8 0 0.144444 24 4 0.432309 143 6 0.75000 8 0 0.70833 68 6 NA 0 0 0.50000 7 0 NA 0 0 0.70000 0.78025 0.88889 0.66667 0.75000 0.95833 0.62179 0.73485 0.50000 0.78990 0.87706 0.60913 0.72125 NA 0.75556 0.45833 0.66667 0.93333 0.92875 0.83333 0.90028 NA 0.62222 0.88889 0.66667 0.87909 0.47222 0.66667 0.81211 0.88390 0.93135 1.00000 0.281703 0.104167 0.378205 0.1666667 0.177778 0.5002395 0.666667 0.72222 NA 0.16667 NA 0 0.79142 0.87755 -0.08603803 6 0.77374 0.86500 -0.09125491 9.9998e-01 0.00036684 weaklyHypometh 1.00000000 0.36684 insignificant 0.9989045 0.0086927 weaklyHypometh 1 1 insignificant -0.0796703 0.108636 lowCoverage 1 lowCoverage 0.79142 0.297386 0.487320 6 0.77374 0.261217 0.5125283 1.9830e-31 1.000000 hypermethylated 2.4788e-29 1 hypermethylated 5.7341e-11 1.000000 hypermethylated 8.1916e-09 1 hypermethylated 0.515062 6.5601e-06 lowCoverage 5.4667e-04 lowCoverage 0.79142 0.72289 0.0668346 0 0.77374 0.70435 0.06939035 5.8159e-02 0.66121490 noCoverage 1.0000e+00 1.000000 noCoverage 2.5873e-01 0.56386627 noCoverage 1.0000e+00 1.000000 noCoverage 0.0940458 3.5025e-01 lowCoverage 1.0000000 lowCoverage 0.87755 0.297386 0.575576 6 0.86500 0.261217 0.6037832 9.6112e-31 1.00000000 hypermethylated 1.6019e-28 1.00000 hypermethylated 5.3427e-10 1.000000 hypermethylated 8.9046e-08 1 hypermethylated 0.5947320 1.8493e-06 lowCoverage 2.0548e-04 lowCoverage 0.87755 0.72289 0.1554353 0 0.86500 0.70435 0.1606453 6.4221e-04 9.8603e-01 noCoverage 4.0138e-02 1.000000 noCoverage 7.7345e-02 0.925353 noCoverage 1.0000000 1 noCoverage 0.173716 0.13698804 lowCoverage 1.00000 lowCoverage 0.2973856 0.72289 -0.411595 0 0.261217 0.70435 -0.44313794 1.0000e+00 1.3318e-07 noCoverage 1.0000e+00 8.8785e-06 noCoverage 9.9999e-01 5.7206e-03 noCoverage 1.0000000 1.8454e-01 noCoverage -0.4210158 1.1998e-02 lowCoverage 3.6357e-01 lowCoverage chr20 48102744 48103744 153380 SNAI1 ENSG00000124216 0.66564 87 7 0.58619 109 8 0.78438 92 8 0.71162 107 7 0.76042 31 1 0.77131 102 7 0.69762 69 6 0.85883 74 6 0.72222 46 6 0.61728 37 2 0.81885 133 7 0.86111 12 1 0.44970 39 3 0.65143 20 2 0.49432 53 2 0.86111 9 0 NA 0 0 0.55181 82 6 0.70787 74 6 0.81242 86 6 0.85238 31 2 0.73810 47 5 0.74672 81 8 0.92361 24 1 0.71684 140 5 0.73409 69 8 0.67786 75 7 0.73333 19 2 0.90023 49 6 0.77885 97 8 0.80748 79 7 0.76860 109 7 0.151682 117 8 0.169341 112 7 0.045455 177 7 0.224336 127 5 0.102381 59 7 0.104050 153 8 0.71901 107 6 0.46936 125 7 0.81111 57 5 0.63194 58 1 0.64509 56 6 0.71157 0.34121 0.79102 0.65528 0.67090 0.72022 0.70113 0.78410 0.62658 0.88701 0.83208 0.80226 0.63400 0.86925 0.47227 0.80226 NA 0.46565 0.69043 0.74261 0.87288 0.576877 0.87197 0.91268 0.58782 0.66533 0.68307 0.89181 0.86414 0.69007 0.90169 0.80137 0.108629 0.129112 0.036980 0.3741710 0.111077 0.1068292 0.693503 0.45101 0.634652 0.61582 0.59050 0 0.71429 0.76585 -0.03959786 7 0.72217 0.60922 0.11295041 6.8825e-01 0.06356802 insignificant 1.00000000 1.00000 insignificant 0.9036136 0.0465962 weaklyHypometh 1 1 insignificant -0.0770794 0.038632 lowCoverage 1 lowCoverage 0.71406 0.096644 0.621608 7 0.69439 0.078790 0.6155985 1.3144e-43 1.000000 hypermethylated 3.2861e-41 1 hypermethylated 6.5041e-16 1.000000 hypermethylated 2.1680e-13 1 hypermethylated 0.571555 1.9722e-11 lowCoverage 7.2812e-09 lowCoverage 0.71383 0.54094 0.1626451 6 0.68583 0.60500 0.08082760 1.6442e-05 0.40588114 weaklyHypermeth 1.4947e-03 1.000000 weaklyHypermeth 1.2062e-03 0.34873282 weaklyHypermeth 1.0966e-01 1.000000 insignificant 0.0491255 4.6443e-01 lowCoverage 1.0000000 lowCoverage 0.76773 0.096904 0.666194 7 0.74460 0.087544 0.6570589 4.5411e-47 1.00000000 hypermethylated 1.5137e-44 1.00000 hypermethylated 3.4738e-15 1.000000 hypermethylated 1.8737e-12 1 hypermethylated 0.6486341 1.8747e-10 hypermethylated 8.3023e-08 hypermethylated 0.76838 0.53865 0.1839598 6 0.77518 0.55563 0.2195528 4.0572e-07 9.4391e-01 weaklyHypermeth 5.8383e-05 1.000000 weaklyHypermeth 3.6637e-04 0.903162 weaklyHypermeth 0.0509017 1 weaklyHypermeth 0.126205 0.08853838 insignificant 1.00000 insignificant 0.0970350 0.53865 -0.470900 6 0.098487 0.55563 -0.45713848 9.9997e-01 6.6070e-22 hypomethylated 1.0000e+00 1.3214e-19 hypomethylated 1.0000e+00 5.7430e-09 hypomethylated 1.0000000 1.9143e-06 hypomethylated -0.5224292 2.1366e-04 hypomethylated 1.9423e-02 hypomethylated chr20 48282866 48283866 153386 CEBPB ENSG00000172216 0.79976 204 8 0.68071 243 8 0.67674 252 8 0.79043 212 4 0.80859 152 8 0.72158 321 8 0.87151 261 8 0.86567 203 8 0.82974 179 8 0.73197 176 8 0.78948 279 8 0.82288 141 8 0.75768 192 7 0.81470 48 3 0.81978 258 8 0.87094 152 8 0.72310 84 5 0.82556 217 6 0.88405 180 8 0.76858 238 8 0.67558 121 8 0.49508 97 6 0.72528 215 8 0.74409 118 8 0.87500 68 4 0.87821 279 8 0.72501 148 8 0.76144 141 8 0.66963 149 8 0.72054 315 8 0.84875 287 8 0.88053 254 8 0.628003 197 8 0.632008 180 8 0.779932 161 5 0.542857 49 4 0.797422 167 9 0.756969 298 8 0.79087 231 8 0.65896 205 6 0.67286 183 8 0.65994 179 4 0.71332 225 8 0.88816 0.65611 0.79381 0.82759 0.91251 0.89475 0.86574 0.88331 0.85906 0.85074 0.87779 0.79716 0.82879 0.86131 0.84782 0.90541 0.68855 0.82026 0.85073 0.83103 0.85914 0.610692 0.80993 0.76038 0.89544 0.86967 0.75646 0.86834 0.83559 0.91359 0.86694 0.88425 0.674857 0.690915 0.803323 0.7695506 0.841158 0.8097387 0.802333 0.77084 0.717593 0.73884 0.79139 4 0.82866 0.84261 -0.01713976 8 0.67496 0.67378 0.00118120 7.4451e-01 0.53942580 insignificant 1.00000000 1.00000 insignificant 0.5772926 0.9438013 insignificant 1 1 insignificant 0.0427455 0.242824 insignificant 1 insignificant 0.82886 0.737643 0.093472 8 0.74996 0.696065 0.0538950 4.1819e-11 0.100787 weaklyHypermeth 1.6084e-09 1 weaklyHypermeth 6.1854e-03 0.115656 weaklyHypermeth 1.0496e-01 1 insignificant 0.103143 5.7653e-02 insignificant 9.4512e-01 insignificant 0.82886 0.79668 0.0552245 8 0.74996 0.74745 0.00251153 3.5499e-08 0.31124051 weaklyHypermeth 4.4374e-06 1.000000 weaklyHypermeth 1.6799e-04 0.89636090 weaklyHypermeth 2.7999e-02 1.000000 weaklyHypermeth 0.0934830 1.4427e-02 weaklyHypermeth 0.8336022 insignificant 0.84415 0.737643 0.088091 8 0.74865 0.696065 0.0525825 5.6296e-06 0.67353385 weaklyHypermeth 1.1978e-04 1.00000 weaklyHypermeth 7.7141e-02 0.103968 insignificant 8.7661e-01 1 insignificant 0.0603970 2.7904e-01 insignificant 1.0000e+00 insignificant 0.84415 0.79668 0.0671244 8 0.74865 0.74745 0.0011991 8.4271e-05 9.9707e-01 weaklyHypermeth 7.6610e-03 1.000000 weaklyHypermeth 1.7467e-02 0.762386 weaklyHypermeth 0.8317706 1 insignificant 0.050737 0.23441747 insignificant 1.00000 insignificant 0.7376426 0.79668 -0.019420 8 0.696065 0.74745 -0.05138343 1.7664e-01 4.4222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9503e-01 8.3266e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0096596 8.4830e-01 insignificant 1.0000e+00 insignificant chr20 48358359 48359359 153388 ENSG00000203999 0.51622 217 6 0.28808 151 7 0.37703 165 10 0.16011 204 7 0.25117 168 8 0.33619 249 10 0.28882 247 10 0.35234 178 9 0.29776 235 10 0.32965 220 10 0.33853 213 8 0.27395 157 7 0.20641 265 9 0.53385 69 2 0.20790 234 10 0.21519 131 6 0.25813 139 9 0.17077 287 6 0.24620 162 9 0.26293 329 10 0.34852 95 8 0.27962 134 8 0.32435 172 10 0.31071 82 7 0.34673 85 6 0.21094 206 9 0.50206 118 10 0.37891 99 9 0.35636 118 7 0.19801 260 9 0.26021 228 10 0.51821 276 10 0.011111 158 9 0.000000 154 7 0.000000 79 3 0.070370 73 6 0.035833 89 8 0.042930 207 9 0.33993 222 8 0.32774 202 7 0.15851 191 4 0.34375 191 6 0.27968 212 8 0.53788 0.42711 0.49108 0.34885 0.24247 0.42464 0.41755 0.40457 0.32866 0.42750 0.41436 0.28101 0.36581 0.40230 0.28721 0.23198 0.21935 0.19702 0.32272 0.23242 0.39452 0.473036 0.43762 0.42716 0.48454 0.32943 0.60111 0.46902 0.47828 0.28403 0.27557 0.57140 0.011791 0.000000 0.000000 0.0316667 0.026190 0.0225462 0.488606 0.41178 0.361212 0.37349 0.34042 4 0.33259 0.39722 -0.05549211 10 0.28179 0.32483 -0.04304306 9.8207e-01 0.00921842 weaklyHypometh 1.00000000 1.00000 insignificant 0.9977028 0.0112797 weaklyHypometh 1 1 insignificant -0.0406574 0.270754 insignificant 1 insignificant 0.33259 0.015789 0.313509 9 0.28179 0.024253 0.2575353 9.9314e-24 1.000000 hypermethylated 9.9314e-22 1 hypermethylated 3.7663e-13 1.000000 hypermethylated 7.5326e-11 1 hypermethylated 0.268854 9.7000e-11 hypermethylated 1.9400e-08 hypermethylated 0.33259 0.36739 -0.0571024 6 0.28179 0.30843 -0.02663689 2.5130e-01 0.00010740 weaklyHypometh 1.0000e+00 0.056459 weaklyHypometh 2.1998e-01 0.05033515 insignificant 1.0000e+00 1.000000 insignificant 0.0056402 8.9454e-01 insignificant 1.0000000 insignificant 0.39722 0.015789 0.362502 9 0.32483 0.024253 0.3005783 5.2691e-18 1.00000000 hypermethylated 5.2915e-16 1.00000 hypermethylated 8.9061e-13 1.000000 hypermethylated 2.2265e-10 1 hypermethylated 0.3095115 8.5792e-08 hypermethylated 1.4299e-05 hypermethylated 0.39722 0.36739 0.0204939 6 0.32483 0.30843 0.0164062 1.8007e-01 2.4525e-01 insignificant 1.0000e+00 1.000000 insignificant 5.5290e-02 0.763078 insignificant 1.0000000 1 insignificant 0.046298 0.32882580 insignificant 1.00000 insignificant 0.0157895 0.36739 -0.354165 6 0.024253 0.30843 -0.28417217 1.0000e+00 7.3160e-21 hypomethylated 1.0000e+00 1.2193e-18 hypomethylated 1.0000e+00 8.2873e-08 hypomethylated 1.0000000 2.0718e-05 hypomethylated -0.2632138 9.0890e-04 hypomethylated 6.9915e-02 hypomethylated chr20 48362558 48363558 153389 ENSG00000203999 0.92857 98 4 0.91062 177 5 0.73539 68 4 0.82199 117 4 0.85058 53 4 0.86740 179 5 0.70960 67 2 0.85994 123 5 0.88061 55 4 0.90196 55 4 0.88156 144 5 0.75833 32 3 0.87527 93 4 0.87361 63 4 0.90181 110 4 NA 0 0 NA 0 0 0.52885 123 4 0.91087 78 5 0.95177 113 4 0.80340 60 4 0.82188 42 3 0.88342 65 5 0.74530 46 5 0.96032 48 5 0.91076 212 5 0.82384 101 4 0.57724 69 4 0.76825 198 4 0.90146 271 5 0.89735 238 5 0.91014 155 5 0.200000 185 5 0.000000 69 4 0.250000 88 4 0.250000 33 4 0.130952 227 5 0.202564 267 5 0.90924 116 4 0.89281 99 4 0.83263 93 5 0.86469 87 4 0.85780 73 5 0.91629 0.91038 0.59371 0.91060 0.83250 0.88143 0.63264 0.89764 0.88371 0.91575 0.88110 0.83594 0.89132 0.89062 0.90062 NA NA 0.68120 0.89525 0.94180 0.76465 0.843880 0.91698 0.75000 0.93006 0.92618 0.80920 0.61573 0.91807 0.91832 0.90514 0.90077 0.000000 0.000000 0.000000 0.0000000 0.000000 0.0040064 0.892609 0.86678 0.809589 0.88424 0.85296 3 0.85240 0.87159 -0.01914366 4 0.84942 0.72503 0.12439282 6.2354e-01 0.52815538 lowCoverage 1.00000000 1.00000 lowCoverage 0.6997861 0.8010756 lowCoverage 1 1 lowCoverage 0.0079836 0.836909 lowCoverage 1 lowCoverage 0.85240 0.044879 0.819834 4 0.84942 0.155181 0.6942390 6.5712e-51 0.996877 lowCoverage 2.5508e-48 1 lowCoverage 6.1440e-10 0.993497 lowCoverage 7.6800e-08 1 lowCoverage 0.669344 1.1154e-07 lowCoverage 1.2393e-05 lowCoverage 0.85240 0.85897 -0.0140883 4 0.84942 0.86045 -0.01102684 5.6379e-01 0.33530805 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.5765e-01 0.55332618 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0298350 2.9120e-01 lowCoverage 1.0000000 lowCoverage 0.87159 0.044879 0.826611 5 0.72503 0.155181 0.5698462 1.6051e-41 0.99620475 hypermethylated 4.0128e-39 1.00000 hypermethylated 1.8986e-08 0.997232 hypermethylated 2.7124e-06 1 hypermethylated 0.6613603 3.6198e-08 lowCoverage 7.2396e-06 lowCoverage 0.87159 0.85897 0.0049605 4 0.72503 0.86045 -0.1354197 7.0082e-01 5.4591e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.3005e-01 0.430686 lowCoverage 1.0000000 1 lowCoverage -0.037819 0.26758931 lowCoverage 1.00000 lowCoverage 0.0448792 0.85897 -0.837021 4 0.155181 0.86045 -0.70526581 1.0000e+00 2.0645e-32 lowCoverage 1.0000e+00 1.0322e-29 lowCoverage 1.0000e+00 1.0358e-06 lowCoverage 1.0000000 1.7263e-04 lowCoverage -0.6991788 2.0428e-06 lowCoverage 5.1070e-04 lowCoverage chr20 48596495 48597495 153398 PTPN1 ENSG00000196396 0.65078 312 8 0.57157 181 8 0.66517 139 8 0.67473 236 8 0.72842 126 8 0.62756 396 8 0.66703 121 8 0.65348 158 8 0.66327 126 8 0.65969 133 8 0.57462 220 8 0.52241 99 8 0.68200 180 8 1.00000 2 0 0.63681 155 8 0.53906 112 8 0.62894 101 8 0.68584 235 8 0.69561 192 8 0.69723 333 8 0.72515 63 6 0.68276 111 6 0.59116 173 8 0.61968 104 6 0.55792 72 6 0.68908 277 8 0.62314 78 6 0.73201 68 6 0.55784 149 7 0.64870 275 8 0.67295 292 8 0.65191 454 8 0.400440 230 8 0.353872 139 8 0.424309 161 7 0.480903 64 8 0.505019 112 7 0.408128 339 8 0.65280 282 8 0.65215 281 8 0.64064 270 8 0.66380 248 8 0.71555 237 8 0.74777 0.66684 0.73804 0.75601 0.79486 0.70290 0.72147 0.70194 0.74861 0.74784 0.65095 0.60019 0.76451 NA 0.74902 0.63450 0.73427 0.73048 0.76542 0.76988 0.77684 0.695292 0.67877 0.75336 0.65399 0.75906 0.62006 0.78094 0.64324 0.70807 0.74041 0.71620 0.463484 0.385931 0.414664 0.4770473 0.548500 0.4711215 0.724928 0.73366 0.724508 0.73275 0.75893 6 0.72561 0.71928 0.00604851 8 0.64814 0.65084 -0.00270594 3.1613e-01 0.41168746 insignificant 1.00000000 1.00000 insignificant 0.2529894 0.6996908 insignificant 1 1 insignificant 0.0151856 0.582264 insignificant 1 insignificant 0.72561 0.414354 0.311662 8 0.64814 0.409960 0.2381752 3.7452e-32 0.943905 hypermethylated 6.2420e-30 1 hypermethylated 1.5642e-06 0.895207 hypermethylated 1.1173e-04 1 hypermethylated 0.232432 2.1654e-06 hypermethylated 1.9685e-04 hypermethylated 0.72561 0.74355 -0.0024005 8 0.64814 0.66295 -0.01481157 4.5507e-01 0.21683377 insignificant 1.0000e+00 1.000000 insignificant 6.8609e-01 0.26098179 insignificant 1.0000e+00 1.000000 insignificant -0.0037791 8.8224e-01 insignificant 1.0000000 insignificant 0.71928 0.414354 0.303041 8 0.65084 0.409960 0.2408811 1.0691e-22 0.99360543 hypermethylated 1.5274e-20 1.00000 hypermethylated 3.5765e-05 0.975218 hypermethylated 1.8758e-03 1 hypermethylated 0.2172465 1.1829e-05 hypermethylated 1.1829e-03 hypermethylated 0.71928 0.74355 -0.0100423 8 0.65084 0.66295 -0.0121056 7.8842e-01 3.0938e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4283e-01 0.181810 insignificant 1.0000000 1 insignificant -0.018965 0.38964762 insignificant 1.00000 insignificant 0.4143541 0.74355 -0.311769 8 0.409960 0.66295 -0.25298676 9.9890e-01 4.7516e-15 hypomethylated 1.0000e+00 6.7880e-13 hypomethylated 9.9895e-01 2.1317e-05 hypomethylated 1.0000000 2.3686e-03 hypomethylated -0.2362112 2.0958e-05 hypomethylated 3.4930e-03 hypomethylated chr20 49881639 49882639 153419 SALL4 ENSG00000101115 0.86166 60 6 0.82739 106 6 0.75728 45 4 0.81077 65 5 0.95238 24 2 0.88030 161 5 0.66612 38 3 0.94424 54 4 0.86753 35 2 0.88889 25 1 0.94117 197 6 0.83333 4 0 0.96252 68 4 0.76471 25 1 0.73905 39 4 0.90000 24 3 0.75000 11 1 0.82612 33 4 0.75789 42 4 0.86652 94 5 0.70702 109 5 0.74058 100 4 0.73724 47 3 0.64563 117 5 0.72961 90 4 0.79734 144 5 0.63811 407 5 0.52213 56 4 0.71713 37 4 0.87034 102 6 0.97068 79 5 0.86466 186 5 0.286394 111 6 0.451840 37 3 0.530159 56 3 0.269231 20 1 0.437831 142 6 0.401149 98 6 0.69815 47 3 0.62065 86 5 0.28333 20 1 0.59848 19 2 0.59492 50 3 0.88864 0.87530 0.68039 0.81111 1.00000 0.94131 0.64583 0.87898 0.78314 0.89931 0.90078 0.71348 0.86926 0.89400 0.78770 0.76042 0.57441 0.82129 0.78399 0.85483 0.77363 0.818841 0.73289 0.75741 0.88773 0.85673 0.75779 0.70359 0.88854 0.85254 0.90132 0.90914 0.199430 0.513122 0.769841 0.4583333 0.546494 0.4649395 0.616898 0.48906 0.389583 0.38307 0.43858 1 0.86957 0.66961 0.07437531 4 0.88397 0.72780 0.15617365 1.0910e-08 0.96627419 lowCoverage 0.00001091 1.00000 lowCoverage 0.0134056 0.9790594 lowCoverage 1 1 lowCoverage 0.0948541 0.026374 lowCoverage 1 lowCoverage 0.86957 0.352052 0.516996 4 0.88397 0.370069 0.5139021 2.1303e-30 1.000000 lowCoverage 2.3670e-28 1 lowCoverage 4.7057e-09 1.000000 lowCoverage 5.2286e-07 1 lowCoverage 0.443793 2.1794e-05 lowCoverage 1.6764e-03 lowCoverage 0.86957 0.58108 0.2927337 4 0.88397 0.64844 0.23553334 1.0697e-12 0.99998008 lowCoverage 2.6741e-10 1.000000 lowCoverage 1.5640e-05 0.99999239 lowCoverage 3.1280e-03 1.000000 lowCoverage 0.2807863 1.5005e-02 lowCoverage 0.8336022 lowCoverage 0.66961 0.352052 0.419823 6 0.72780 0.370069 0.3577285 5.2915e-18 0.98813400 hypermethylated 5.2915e-16 1.00000 hypermethylated 4.9594e-05 0.999630 hypermethylated 2.0664e-03 1 hypermethylated 0.3489392 3.1920e-05 lowCoverage 2.9018e-03 lowCoverage 0.66961 0.58108 0.2425264 4 0.72780 0.64844 0.0793597 5.3745e-09 5.6757e-01 lowCoverage 1.3436e-06 1.000000 lowCoverage 3.9584e-05 0.928118 lowCoverage 0.0105436 1 lowCoverage 0.185932 0.05774276 lowCoverage 1.00000 lowCoverage 0.3520518 0.58108 -0.229510 4 0.370069 0.64844 -0.27836877 9.9943e-01 8.9221e-05 lowCoverage 1.0000e+00 3.3045e-03 lowCoverage 9.8864e-01 1.0312e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.1630069 9.1556e-02 lowCoverage 1.0000e+00 lowCoverage chr20 52790314 52791314 153716 DOK5 ENSG00000101134 0.64922 139 5 0.64398 49 5 0.62451 65 5 0.72028 101 5 0.60960 56 5 0.72503 147 5 0.58776 96 5 0.69778 42 5 0.64000 32 4 0.71154 72 5 0.71894 113 5 0.60368 59 5 0.76437 68 5 NA 0 0 0.68420 103 5 0.65778 90 5 0.68000 43 5 0.71392 116 5 0.74907 67 5 0.72058 147 5 0.80000 25 3 0.76667 29 3 0.69437 98 5 0.71429 7 1 0.77556 32 5 0.74444 26 1 0.59056 39 4 0.54286 11 1 0.47286 37 4 0.58667 43 4 0.75000 28 1 0.74445 199 5 0.353077 28 2 0.638690 77 5 0.512302 49 5 0.715568 53 5 0.705556 20 1 0.767857 29 1 0.75289 186 5 0.71541 199 5 0.74328 132 5 0.74828 148 5 0.79661 138 5 0.64626 0.74708 0.66446 0.70344 0.63443 0.75458 0.60330 0.64222 0.56167 0.79801 0.65583 0.60124 0.80838 NA 0.67107 0.66130 0.63667 0.77418 0.68666 0.70669 0.90000 0.668056 0.72895 NA 0.77963 0.72870 0.56565 0.64048 0.61115 0.71389 NA 0.72960 0.486154 0.527679 0.617394 0.6363553 0.737963 0.5639020 0.772454 0.71893 0.782248 0.79064 0.78994 1 0.67850 0.70557 -0.02382400 5 0.68064 0.69991 -0.01927422 6.2887e-01 0.14188032 insignificant 1.00000000 1.00000 insignificant 0.8046984 0.1180487 insignificant 1 1 insignificant -0.0028285 0.932588 lowCoverage 1 lowCoverage 0.67850 0.613281 0.070991 5 0.68064 0.620144 0.0604921 2.6553e-03 0.973949 weaklyHypermeth 3.2874e-02 1 weaklyHypermeth 5.4503e-03 0.955199 weaklyHypermeth 9.7485e-02 1 weaklyHypermeth 0.063556 3.6827e-01 lowCoverage 1.0000e+00 lowCoverage 0.67850 0.74720 -0.0691926 5 0.68064 0.74746 -0.06682030 9.9927e-01 0.00063940 weaklyHypometh 1.0000e+00 0.145291 insignificant 9.9956e-01 0.00019605 weaklyHypometh 1.0000e+00 0.065351 weaklyHypometh -0.0722305 1.6078e-03 lowCoverage 0.2679707 lowCoverage 0.70557 0.613281 0.094569 5 0.69991 0.620144 0.0797663 7.1093e-03 0.98864297 weaklyHypermeth 8.6699e-02 1.00000 weaklyHypermeth 3.5243e-02 0.982898 weaklyHypermeth 4.3510e-01 1 insignificant 0.0663841 3.7677e-01 lowCoverage 1.0000e+00 lowCoverage 0.70557 0.74720 -0.0487112 5 0.69991 0.74746 -0.0475461 9.7186e-01 7.4895e-02 insignificant 1.0000e+00 1.000000 insignificant 9.5955e-01 0.117196 insignificant 1.0000000 1 insignificant -0.069402 0.05597496 lowCoverage 1.00000 lowCoverage 0.6132812 0.74720 -0.143760 5 0.620144 0.74746 -0.12731237 9.9889e-01 1.3418e-03 weaklyHypometh 1.0000e+00 2.7954e-02 weaklyHypometh 9.9407e-01 7.2677e-04 weaklyHypometh 1.0000000 3.8251e-02 weaklyHypometh -0.1357861 8.6474e-02 lowCoverage 1.0000e+00 lowCoverage chr20 55706490 55707490 153814 PMEPA1 ENSG00000124225 0.92259 371 6 0.93197 70 7 0.53039 178 7 0.95576 262 7 0.92892 91 6 0.93902 273 7 0.96407 114 6 0.81781 33 1 0.95291 60 6 1.00000 50 6 0.89274 196 6 0.89066 68 6 0.97569 94 6 NA 0 0 0.91427 153 6 0.93981 28 1 0.94643 93 6 0.67200 398 6 0.87665 57 6 0.93940 260 6 0.72831 50 6 0.79982 100 6 0.89637 128 7 0.78968 34 4 0.80873 83 6 0.88546 129 7 0.89970 88 6 0.97222 34 5 0.79545 46 5 0.89761 111 7 0.96250 67 7 0.95071 237 6 0.300361 159 7 0.013333 143 6 0.000000 69 6 0.135823 100 6 0.159150 43 4 0.045637 222 7 0.89193 384 6 0.90969 322 6 0.96316 287 6 0.97523 469 6 0.71318 268 6 0.90340 0.91616 0.53127 0.94218 0.91185 0.92456 0.95123 0.82371 0.94965 1.00000 0.88741 0.88063 0.97085 NA 0.90480 0.93371 0.95174 0.60130 0.87852 0.92202 0.75061 0.808006 0.89755 0.80280 0.80476 0.87171 0.89525 0.97342 0.78455 0.89536 0.95238 0.93928 0.268946 0.011043 0.073675 0.1318022 0.205221 0.0257429 0.930613 0.91128 0.958033 0.97371 0.77811 3 0.85749 0.88528 -0.03141811 6 0.84760 0.89000 -0.04239754 8.1055e-01 0.03318608 weaklyHypometh 1.00000000 1.00000 insignificant 0.0096084 0.6038897 inconclusive 1 1 insignificant 0.0287214 0.412742 insignificant 1 insignificant 0.85749 0.153533 0.740415 6 0.84760 0.136121 0.7114780 1.7809e-56 1.000000 hypermethylated 1.7809e-53 1 hypermethylated 2.7675e-17 1.000000 hypermethylated 2.7675e-14 1 hypermethylated 0.785217 2.7776e-07 hypermethylated 2.7776e-05 hypermethylated 0.85749 0.91734 -0.0555919 6 0.84760 0.86982 -0.02222101 8.9283e-01 0.07997008 insignificant 1.0000e+00 1.000000 insignificant 3.8873e-01 0.55757593 insignificant 1.0000e+00 1.000000 insignificant 0.0036296 9.4813e-01 insignificant 1.0000000 insignificant 0.88528 0.153533 0.755320 7 0.89000 0.136121 0.7538755 1.3841e-53 1.00000000 hypermethylated 1.3841e-50 1.00000 hypermethylated 3.7474e-15 1.000000 hypermethylated 1.8737e-12 1 hypermethylated 0.7564959 8.9169e-07 hypermethylated 1.1146e-04 hypermethylated 0.88528 0.91734 -0.0339571 6 0.89000 0.86982 0.0201765 5.5369e-01 1.0317e-01 insignificant 1.0000e+00 1.000000 insignificant 8.9406e-01 0.159001 insignificant 1.0000000 1 insignificant -0.025092 0.64833329 insignificant 1.00000 insignificant 0.1535326 0.91734 -0.808833 6 0.136121 0.86982 -0.73369901 1.0000e+00 1.0239e-33 hypomethylated 1.0000e+00 1.0239e-30 hypomethylated 1.0000e+00 9.7357e-10 hypomethylated 1.0000000 5.0659e-07 hypomethylated -0.7815877 1.0046e-06 hypomethylated 3.3488e-04 hypomethylated chr20 55956002 55957002 153821 ENSG00000221007 0.85989 120 5 0.91978 160 4 0.77667 31 4 0.94987 65 4 0.90794 34 3 0.86834 195 5 0.63833 23 2 0.89808 73 5 0.82792 30 3 0.94444 31 4 0.96931 243 7 0.66667 5 0 0.97253 118 5 0.91789 49 3 0.81071 41 4 0.28571 21 3 0.88889 5 0 0.55407 81 5 0.97847 103 4 0.93706 134 5 0.84682 114 5 0.84013 49 5 0.80808 38 2 0.95468 63 4 0.84333 24 2 0.93807 271 5 0.92344 77 4 0.36667 10 0 0.87582 90 4 0.98095 327 5 0.98135 289 5 0.95785 207 5 0.005102 98 5 0.000000 34 4 0.000000 31 3 0.066667 16 3 0.173169 155 4 0.000000 176 5 0.96154 35 1 0.78846 90 4 0.98049 54 2 0.76471 17 1 0.88592 66 4 0.84326 0.86960 0.75526 0.92024 0.81930 0.87071 0.57522 0.84818 0.80366 0.85088 0.93155 0.81622 0.97470 0.90877 0.74530 0.35058 0.76359 0.55750 0.96799 0.91999 0.77570 0.914087 0.76077 0.91990 0.78947 0.95629 0.86741 0.25000 0.83513 0.97293 0.97097 0.96185 0.019737 0.000000 0.000000 0.0006579 0.013337 0.0000000 0.974696 0.77126 0.987163 0.90093 0.91106 0 0.86684 0.92559 -0.05362827 5 0.91092 0.94280 -0.03187883 9.9929e-01 0.14390521 insignificant 1.00000000 1.00000 insignificant 0.9716220 0.4217789 insignificant 1 1 insignificant -0.0311365 0.618870 lowCoverage 1 lowCoverage 0.86684 0.009804 0.856611 5 0.91092 0.055215 0.8557043 7.6523e-51 1.000000 hypermethylated 2.5508e-48 1 hypermethylated 1.5962e-14 1.000000 hypermethylated 3.9904e-12 1 hypermethylated 0.787805 1.4820e-13 lowCoverage 1.4820e-10 lowCoverage 0.86316 0.84733 -0.0075316 2 0.87529 0.86416 0.01112356 6.0128e-01 0.78769090 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5693e-01 0.09113530 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0475938 4.3287e-01 lowCoverage 1.0000000 lowCoverage 0.92559 0.009804 0.913561 5 0.94280 0.055215 0.8875831 1.4324e-48 1.00000000 hypermethylated 7.1618e-46 1.00000 hypermethylated 4.9685e-12 1.000000 hypermethylated 9.9371e-10 1 hypermethylated 0.8189420 1.3070e-10 lowCoverage 8.3023e-08 lowCoverage 0.92472 0.84733 0.0445742 2 0.91992 0.86416 0.0557539 6.5312e-02 9.8906e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.6525e-01 0.207594 lowCoverage 1.0000000 1 lowCoverage -0.016457 0.80430405 lowCoverage 1.00000 lowCoverage 0.0079365 0.84733 -0.847249 2 0.010634 0.86416 -0.85352913 1.0000e+00 1.1628e-27 lowCoverage 1.0000e+00 3.8759e-25 lowCoverage 1.0000e+00 2.5882e-07 lowCoverage 1.0000000 5.1765e-05 lowCoverage -0.8353992 8.0014e-07 lowCoverage 3.3488e-04 lowCoverage chr20 60462042 60463042 153954 C20orf151 ENSG00000130701 0.91562 299 7 0.89639 456 7 0.90121 199 6 0.96056 258 7 0.88286 126 7 0.90693 427 7 0.86517 199 7 0.91556 202 7 0.90436 225 6 0.94993 169 6 0.92153 338 8 0.89059 67 6 0.93441 219 6 0.90458 145 6 0.93525 162 6 0.63699 58 5 0.88299 42 3 0.82604 292 6 0.94117 241 6 0.97324 289 6 0.93567 94 6 0.88411 118 6 0.90129 184 6 0.87689 154 8 0.79465 91 6 0.92357 328 7 0.77346 198 6 0.80314 127 5 0.89570 290 6 0.93624 443 7 0.90804 371 7 0.94775 422 7 0.663983 239 7 0.511526 107 6 0.856864 397 6 0.693357 31 2 0.672560 315 7 0.604753 330 7 0.93535 328 7 0.89891 299 7 0.91362 217 7 0.85388 207 5 0.96704 345 7 0.92263 0.85276 0.91411 0.93558 0.87280 0.89010 0.85647 0.87334 0.90134 0.91779 0.91801 0.86357 0.93044 0.92088 0.92009 0.58131 0.82491 0.89901 0.92247 0.95840 0.90165 0.897737 0.89253 0.91400 0.91735 0.88989 0.80372 0.79175 0.89727 0.91137 0.92702 0.93016 0.736574 0.579576 0.825797 0.5994067 0.689307 0.7347072 0.917302 0.92566 0.928640 0.96667 0.95691 6 0.90390 0.90284 -0.00048178 7 0.86243 0.89084 -0.02841305 1.6382e-01 0.19060293 insignificant 1.00000000 1.00000 insignificant 0.2950008 0.2458172 insignificant 1 1 insignificant 0.0155618 0.508368 insignificant 1 insignificant 0.90390 0.730092 0.163809 6 0.86243 0.707990 0.1544378 8.3673e-13 0.999938 weaklyHypermeth 4.1837e-11 1 weaklyHypermeth 1.0403e-05 0.999994 weaklyHypermeth 5.2014e-04 1 weaklyHypermeth 0.230095 3.1105e-03 weaklyHypermeth 1.1004e-01 insignificant 0.90408 0.93625 -0.0327606 7 0.90773 0.91136 -0.00363291 8.8050e-01 0.08284537 insignificant 1.0000e+00 1.000000 insignificant 8.6280e-01 0.02682838 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0164913 5.1567e-01 insignificant 1.0000000 insignificant 0.90284 0.730092 0.170666 6 0.89084 0.707990 0.1828509 8.6505e-07 1.00000000 weaklyHypermeth 2.2764e-05 1.00000 weaklyHypermeth 4.3143e-05 1.000000 weaklyHypermeth 1.8758e-03 1 weaklyHypermeth 0.2145336 4.2435e-03 weaklyHypermeth 1.4629e-01 insignificant 0.90280 0.93625 -0.0326914 7 0.87720 0.91136 -0.0341682 4.2431e-01 5.8499e-02 insignificant 1.0000e+00 1.000000 insignificant 6.5533e-01 0.064176 insignificant 1.0000000 1 insignificant -0.032053 0.23520985 insignificant 1.00000 insignificant 0.7299013 0.93625 -0.197841 6 0.671489 0.91136 -0.23987546 1.0000e+00 3.4658e-05 weaklyHypometh 1.0000e+00 1.4441e-03 weaklyHypometh 1.0000e+00 1.7585e-04 weaklyHypometh 1.0000000 1.1934e-02 weaklyHypometh -0.2465867 2.0749e-03 weaklyHypometh 1.2391e-01 insignificant chr20 61936443 61937443 153958 ZBTB46 ENSG00000130584 0.36449 119 6 0.33825 119 9 0.43820 111 9 0.45212 84 9 0.45060 80 6 0.52010 134 9 0.38793 166 9 0.51138 122 8 0.40078 123 9 0.61247 134 9 0.57862 233 9 0.39559 80 5 0.43165 142 9 0.31282 44 5 0.51722 133 9 0.82059 59 5 0.81429 65 5 0.43250 90 7 0.30253 233 9 0.52429 135 9 0.43242 161 9 0.55583 139 9 0.58926 174 9 0.52220 105 8 0.48265 343 5 0.43664 195 9 0.48804 127 9 0.25811 49 4 0.46367 109 7 0.43110 211 9 0.54063 177 9 0.48334 242 9 0.032046 175 9 0.057008 163 9 0.042636 278 6 0.106981 181 9 0.099084 133 10 0.114058 297 9 0.54823 89 6 0.57320 174 9 0.62363 74 7 0.56350 193 9 0.52251 91 9 0.49336 0.48487 0.49899 0.51483 0.45827 0.70431 0.50806 0.60418 0.51898 0.63387 0.62613 0.45396 0.55467 0.58186 0.62710 0.67291 0.63129 0.50707 0.36575 0.62268 0.49194 0.641947 0.61965 0.66075 0.61520 0.60273 0.55160 0.32810 0.58356 0.53600 0.63623 0.54172 0.042620 0.046539 0.075841 0.1001160 0.120644 0.1143342 0.669042 0.69516 0.700569 0.63391 0.59910 4 0.54988 0.47195 -0.00581255 9 0.46254 0.48361 -0.02106829 7.3095e-01 0.66950804 insignificant 1.00000000 1.00000 insignificant 0.9510805 0.5270906 insignificant 1 1 insignificant 0.0066635 0.869079 insignificant 1 insignificant 0.54973 0.077425 0.464661 9 0.44212 0.066710 0.3754150 6.7949e-38 1.000000 hypermethylated 1.3590e-35 1 hypermethylated 2.9639e-16 1.000000 hypermethylated 1.4820e-13 1 hypermethylated 0.405018 2.8170e-11 hypermethylated 7.2812e-09 hypermethylated 0.55138 0.66345 -0.1019316 9 0.47890 0.56570 -0.08679591 8.0185e-01 0.00014120 weaklyHypometh 1.0000e+00 0.056459 weaklyHypometh 8.9881e-01 0.00015279 weaklyHypometh 1.0000e+00 0.065351 weaklyHypometh -0.0858941 2.5419e-02 weaklyHypometh 1.0000000 insignificant 0.47169 0.077425 0.433206 9 0.43197 0.066710 0.3652568 1.1577e-31 1.00000000 hypermethylated 2.3154e-29 1.00000 hypermethylated 8.8711e-15 1.000000 hypermethylated 2.9570e-12 1 hypermethylated 0.3983549 2.4907e-10 hypermethylated 8.3023e-08 hypermethylated 0.47215 0.66345 -0.0976986 9 0.47996 0.56570 -0.0857371 7.5911e-01 2.4436e-04 weaklyHypometh 1.0000e+00 0.122178 insignificant 7.5861e-01 0.005836 weaklyHypometh 1.0000000 1 insignificant -0.092558 0.00702102 weaklyHypometh 0.78011 insignificant 0.0778051 0.66345 -0.577755 9 0.074122 0.56570 -0.49157804 9.9987e-01 3.7264e-27 hypomethylated 1.0000e+00 9.3161e-25 hypomethylated 9.9993e-01 1.0132e-09 hypomethylated 1.0000000 5.0659e-07 hypomethylated -0.4909125 8.5469e-09 hypomethylated 8.5469e-06 hypomethylated chr20 61949450 61950450 153960 ZBTB46 ENSG00000130584 0.44613 145 11 0.38806 291 16 0.54964 397 14 0.54826 144 9 0.36786 307 15 0.56929 311 13 0.46470 310 15 0.52296 324 12 0.36990 297 12 0.62326 328 13 0.58000 375 16 0.55476 154 11 0.31329 348 12 0.42845 188 8 0.38272 283 13 0.47153 128 10 0.41518 65 4 0.47718 124 10 0.39466 415 14 0.50462 234 14 0.47908 191 15 0.38790 150 10 0.52054 162 15 0.45276 222 13 0.49223 282 10 0.41971 510 16 0.38622 413 13 0.34213 228 11 0.50580 314 11 0.36219 537 16 0.48553 433 13 0.41825 270 9 0.503145 328 13 0.348167 385 14 0.407741 354 13 0.390533 193 9 0.317349 243 13 0.648149 528 15 0.46042 230 11 0.55569 190 9 0.50148 93 5 0.41307 133 12 0.58671 128 10 0.29652 0.40894 0.46353 0.40647 0.30403 0.52356 0.44000 0.45372 0.40693 0.49785 0.47955 0.51037 0.25747 0.45264 0.28791 0.46447 0.35825 0.37657 0.30001 0.39253 0.41821 0.191083 0.41286 0.33405 0.39927 0.28354 0.29211 0.29985 0.45355 0.24081 0.38993 0.36300 0.423549 0.348803 0.270027 0.4441372 0.341479 0.5407105 0.455541 0.50113 0.322393 0.32754 0.44982 4 0.42871 0.38285 0.06097274 11 0.46828 0.45094 0.01733288 1.1484e-03 0.96931785 weaklyHypermeth 0.57420750 1.00000 insignificant 0.0096674 0.9071490 weaklyHypermeth 1 1 insignificant 0.0309274 0.240148 insignificant 1 insignificant 0.42890 0.385108 0.063338 11 0.46177 0.458369 0.0034045 4.4313e-05 0.025489 weaklyHypermeth 7.3855e-04 1 weaklyHypermeth 5.5469e-03 0.407280 weaklyHypermeth 9.7485e-02 1 weaklyHypermeth 0.032775 5.5924e-01 insignificant 1.0000e+00 insignificant 0.42904 0.44114 0.0021431 11 0.49486 0.48533 0.00953742 5.3321e-01 0.16509070 insignificant 1.0000e+00 1.000000 insignificant 7.4487e-01 0.23760921 insignificant 1.0000e+00 1.000000 insignificant -0.0348503 3.7332e-01 insignificant 1.0000000 insignificant 0.38275 0.384615 0.019456 14 0.42840 0.456288 -0.0278915 2.4588e-02 0.00035418 weaklyHypermeth 2.7020e-01 0.35418 insignificant 9.6211e-02 0.039668 inconclusive 1.0000e+00 1 insignificant 0.0018475 9.7310e-01 insignificant 1.0000e+00 insignificant 0.38265 0.44243 -0.0654245 11 0.42840 0.53533 -0.1069288 7.2699e-01 8.4633e-05 weaklyHypometh 1.0000e+00 0.084633 weaklyHypometh 9.5178e-01 0.018740 weaklyHypometh 1.0000000 1 insignificant -0.065778 0.11161495 insignificant 1.00000 insignificant 0.3851852 0.44171 -0.045369 11 0.480303 0.51087 -0.03056557 7.8098e-01 4.5203e-02 weaklyHypometh 1.0000e+00 5.7218e-01 insignificant 9.4469e-01 1.2765e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0676252 2.8266e-01 insignificant 1.0000e+00 insignificant chr20 62255152 62256152 153963 NPBWR2 ENSG00000125522 0.92749 356 9 0.85943 88 7 0.95807 268 7 0.91361 173 6 0.95674 178 7 0.94000 262 9 0.93494 220 7 0.84524 81 7 0.91443 172 7 0.92169 193 7 0.93743 350 7 0.94141 217 7 0.97520 120 7 NA 0 0 0.95698 184 7 0.91604 237 7 0.91276 210 7 0.88100 220 8 0.81157 253 9 0.87244 198 7 0.94973 112 7 0.93571 48 3 0.91484 239 7 0.93774 67 7 0.96984 67 7 0.94724 115 9 0.89280 91 7 0.85918 76 7 0.92716 77 7 0.92749 130 9 0.96937 112 9 0.91307 354 9 0.769977 105 7 0.773846 192 7 0.768484 319 6 0.925805 178 9 0.842629 94 7 0.804280 139 9 0.97077 239 9 0.91752 305 9 0.95309 155 9 0.92891 262 9 0.96585 257 9 0.95055 0.85686 0.95901 0.92952 0.95895 0.97876 0.93871 0.85382 0.92076 0.92022 0.93730 0.94420 0.97526 NA 0.95491 0.92622 0.91050 0.93284 0.91271 0.95689 0.95397 0.944888 0.94151 0.94442 0.97096 0.95140 0.89651 0.86128 0.93551 0.95538 0.95997 0.94060 0.767276 0.771435 0.806835 0.9751509 0.848591 0.9456627 0.984601 0.94087 0.963791 0.94408 0.95521 7 0.93764 0.93548 -0.00047647 7 0.92088 0.92489 -0.00400703 6.8628e-01 0.42098710 insignificant 1.00000000 1.00000 insignificant 0.8826386 0.1725793 insignificant 1 1 insignificant -0.0141292 0.299359 insignificant 1 insignificant 0.93719 0.840312 0.071147 7 0.86213 0.749474 0.1126525 2.3606e-06 0.999989 weaklyHypermeth 4.4540e-05 1 weaklyHypermeth 1.7548e-02 0.999838 weaklyHypermeth 2.4715e-01 1 insignificant 0.100381 8.3815e-03 weaklyHypermeth 2.3282e-01 insignificant 0.93719 0.95238 -0.0163566 7 0.86213 0.95213 -0.09000684 9.8314e-01 0.01234873 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.7559e-01 0.02697750 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0326771 4.0855e-02 weaklyHypometh 1.0000000 insignificant 0.93548 0.841131 0.074043 7 0.92489 0.832749 0.0921395 7.8397e-05 0.99999977 weaklyHypermeth 1.3517e-03 1.00000 weaklyHypermeth 1.6920e-03 0.999997 weaklyHypermeth 3.6782e-02 1 weaklyHypermeth 0.1145097 4.6209e-03 weaklyHypermeth 1.4906e-01 insignificant 0.93548 0.95234 -0.0172503 7 0.92489 0.94681 -0.0219265 9.4445e-01 1.8875e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.3936e-01 0.096319 insignificant 1.0000000 1 insignificant -0.018548 0.20710429 insignificant 1.00000 insignificant 0.8403116 0.95238 -0.100495 9 0.749474 0.95213 -0.20265938 1.0000e+00 9.9514e-05 weaklyHypometh 1.0000e+00 3.5541e-03 weaklyHypometh 1.0000e+00 2.1852e-03 weaklyHypometh 1.0000000 9.5010e-02 weaklyHypometh -0.1330576 2.1064e-03 weaklyHypometh 1.2391e-01 insignificant chr20 62278481 62279481 153964 MYT1 ENSG00000196132 0.45182 239 7 0.37091 263 7 0.47891 333 7 0.38660 180 6 0.54083 165 8 0.59200 279 7 0.57055 259 8 0.33570 221 7 0.27209 250 7 0.42579 254 7 0.35535 298 7 0.51685 192 8 0.38888 270 8 0.53974 58 3 0.38555 324 7 0.33226 166 7 0.32800 152 6 0.31966 192 5 0.42937 215 7 0.52239 319 7 0.56006 254 8 0.32131 213 7 0.47641 363 9 0.36318 122 7 0.54000 95 5 0.47522 404 7 0.31803 175 6 0.42726 107 6 0.30144 245 7 0.41184 412 7 0.30023 393 7 0.48371 311 7 0.209273 305 8 0.326106 188 7 0.360165 384 6 0.254174 42 3 0.380121 127 6 0.249936 313 7 0.41324 354 7 0.41255 280 7 0.47454 174 6 0.39817 223 7 0.29033 255 6 0.42585 0.37580 0.44715 0.38853 0.47851 0.46441 0.47846 0.41430 0.32770 0.43966 0.37559 0.47462 0.29651 0.46255 0.35202 0.40530 0.31996 0.39119 0.30150 0.37227 0.55511 0.259276 0.40889 0.38157 0.35146 0.37556 0.30141 0.49399 0.33916 0.37125 0.29558 0.53153 0.154146 0.279243 0.293929 0.1597906 0.263639 0.1927636 0.346266 0.39908 0.400767 0.41210 0.30058 6 0.40916 0.41403 0.01608422 7 0.46615 0.42629 0.03986182 9.3791e-02 0.87244539 insignificant 1.00000000 1.00000 insignificant 0.1712808 0.7688459 insignificant 1 1 insignificant 0.0122716 0.723303 insignificant 1 insignificant 0.40916 0.278882 0.158955 7 0.46615 0.255217 0.2109357 8.7401e-12 1.000000 weaklyHypermeth 3.8001e-10 1 weaklyHypermeth 1.4212e-06 0.998641 weaklyHypermeth 1.0933e-04 1 weaklyHypermeth 0.130533 3.1913e-03 weaklyHypermeth 1.1004e-01 insignificant 0.40916 0.30638 0.0283390 7 0.46615 0.48511 -0.01895263 9.0745e-02 0.82757180 insignificant 1.0000e+00 1.000000 insignificant 5.2589e-02 0.95299939 insignificant 1.0000e+00 1.000000 insignificant 0.0293947 4.4397e-01 insignificant 1.0000000 insignificant 0.41403 0.278882 0.150569 8 0.42629 0.255217 0.1710739 6.3826e-08 0.99999870 weaklyHypermeth 2.0589e-06 1.00000 weaklyHypermeth 1.1947e-05 0.999955 weaklyHypermeth 8.5333e-04 1 weaklyHypermeth 0.1182613 9.1616e-03 weaklyHypermeth 2.3737e-01 insignificant 0.41403 0.30638 0.0130439 7 0.42629 0.48511 -0.0588144 5.1887e-01 3.9451e-01 insignificant 1.0000e+00 1.000000 insignificant 2.1036e-01 0.754695 insignificant 1.0000000 1 insignificant 0.017123 0.67914467 insignificant 1.00000 insignificant 0.2788815 0.30638 -0.137110 7 0.255217 0.48511 -0.22988831 9.9999e-01 1.5229e-06 weaklyHypometh 1.0000e+00 8.9582e-05 weaklyHypometh 9.9991e-01 1.0939e-02 weaklyHypometh 1.0000000 3.1254e-01 insignificant -0.1011383 3.6417e-02 weaklyHypometh 7.8194e-01 insignificant chr20 62278618 62279618 153965 MYT1 ENSG00000196132 0.62520 195 5 0.47779 194 5 0.60019 259 5 0.54505 146 6 0.65707 129 6 0.70374 223 6 0.66853 206 6 0.41665 172 5 0.34763 188 5 0.55633 200 5 0.43059 220 5 0.63159 131 6 0.51850 208 6 0.53974 58 3 0.50800 252 5 0.41697 121 5 0.44189 91 4 0.49389 150 4 0.63357 182 5 0.66179 249 5 0.70579 213 6 0.41312 168 6 0.64221 317 7 0.42869 94 5 0.60619 74 4 0.65666 298 6 0.41494 140 5 0.52801 92 5 0.38390 192 5 0.56684 321 6 0.49564 298 6 0.64179 256 6 0.266419 239 6 0.456549 147 5 0.367917 290 6 0.437562 46 3 0.506827 109 5 0.385989 252 6 0.58919 274 6 0.63687 228 5 0.67180 142 5 0.61786 169 5 0.42205 218 6 0.53464 0.46872 0.55719 0.47884 0.55359 0.56053 0.58625 0.50812 0.40257 0.53902 0.46249 0.54660 0.38865 0.57443 0.45061 0.48489 0.39523 0.48308 0.39519 0.46749 0.69795 0.339842 0.49146 0.48197 0.41783 0.48085 0.35013 0.57334 0.41248 0.47442 0.37919 0.60909 0.196551 0.366013 0.385262 0.2094431 0.345560 0.2476346 0.443451 0.50331 0.497492 0.51642 0.39398 5 0.50448 0.51076 0.01368814 5 0.59976 0.57107 0.02868821 4.5375e-01 0.70515998 insignificant 1.00000000 1.00000 insignificant 0.3863462 0.7210258 insignificant 1 1 insignificant 0.0034215 0.931751 insignificant 1 insignificant 0.50448 0.368421 0.185077 5 0.59976 0.311163 0.2885940 3.3744e-10 0.999996 weaklyHypermeth 9.9248e-09 1 weaklyHypermeth 1.6259e-04 0.994859 weaklyHypermeth 4.8767e-03 1 weaklyHypermeth 0.140192 6.6858e-03 weaklyHypermeth 1.9664e-01 insignificant 0.50448 0.38215 0.0216660 5 0.59976 0.63440 -0.03463919 2.9670e-01 0.64608899 insignificant 1.0000e+00 1.000000 insignificant 2.9564e-01 0.81805152 insignificant 1.0000e+00 1.000000 insignificant -0.0438183 4.0436e-01 insignificant 1.0000000 insignificant 0.51076 0.368421 0.183767 6 0.57107 0.311163 0.2599058 1.1918e-08 0.99999920 weaklyHypermeth 4.4099e-07 1.00000 weaklyHypermeth 2.7201e-04 0.999818 weaklyHypermeth 8.2428e-03 1 weaklyHypermeth 0.1367701 1.2059e-02 weaklyHypermeth 2.9411e-01 insignificant 0.51076 0.38215 0.0073820 5 0.57107 0.63440 -0.0633274 5.4072e-01 4.7537e-01 insignificant 1.0000e+00 1.000000 insignificant 3.9762e-01 0.445471 insignificant 1.0000000 1 insignificant -0.047240 0.40669818 insignificant 1.00000 insignificant 0.3684211 0.38215 -0.188490 5 0.311163 0.63440 -0.32323316 9.9994e-01 4.3655e-06 weaklyHypometh 1.0000e+00 2.1827e-04 weaklyHypometh 9.9969e-01 2.0575e-02 weaklyHypometh 1.0000000 4.5284e-01 insignificant -0.1840098 1.0402e-02 weaklyHypometh 3.2506e-01 insignificant chr21 14791653 14792653 154047 HSPA13 ENSG00000155304 0.55491 373 10 0.54221 448 10 0.49868 365 10 0.58183 358 10 0.48046 437 10 0.53595 546 10 0.47362 361 10 0.49068 472 10 0.53938 426 10 0.58838 453 10 0.50150 504 10 0.49209 379 10 0.50374 406 10 0.56303 185 9 0.54987 554 10 0.57261 333 10 0.41670 578 10 0.55896 462 9 0.53220 367 10 0.53942 405 10 0.47888 225 10 0.37369 270 9 0.51387 265 10 0.47449 288 10 0.48534 149 9 0.46189 390 10 0.48446 209 10 0.50345 278 10 0.62929 285 10 0.41449 440 10 0.45146 406 10 0.52672 629 10 0.42651 368 10 0.42563 218 10 0.63596 568 10 0.55838 43 4 0.49877 340 10 0.44732 380 10 0.64630 477 9 0.53611 385 9 0.62101 355 9 0.62722 273 9 0.58995 493 10 0.63945 0.64939 0.59894 0.70560 0.56767 0.63320 0.56853 0.59294 0.65153 0.68256 0.59519 0.58111 0.60598 0.70269 0.66500 0.68404 0.52597 0.67285 0.64017 0.63842 0.54378 0.44292 0.62543 0.56646 0.60331 0.57033 0.54855 0.53936 0.72745 0.51006 0.54261 0.62258 0.50710 0.52882 0.75312 0.63502 0.53399 0.52744 0.72008 0.63884 0.70088 0.75174 0.66436 9 0.59510 0.53339 0.0557794 10 0.52437 0.47627 0.0481060 6.0243e-10 0.58570461 weaklyHypermeth 6.0243e-07 1.00000 weaklyHypermeth 4.5569e-07 0.817904 weaklyHypermeth 0.00045569 1 weaklyHypermeth 4.2640e-02 0.051717 insignificant 1 insignificant 0.59510 0.57150 0.023998 10 0.52437 0.50687 0.017502 1.0088e-03 0.88646555 weaklyHypermeth 3.8799e-02 1.00000 weaklyHypermeth 2.4021e-04 0.99951 weaklyHypermeth 0.0160142 1 weaklyHypermeth 0.027048 0.4789176 insignificant 1.00000 insignificant 0.59510 0.68734 -0.0608700 9 0.52437 0.60171 -0.077335 9.9931e-01 1.0912e-06 weaklyHypometh 1.0000e+00 0.0010912 weaklyHypometh 9.9854e-01 2.9795e-05 weaklyHypometh 1.000000 0.029795 weaklyHypometh -0.078308 0.010411 weaklyHypometh 1 insignificant 0.53339 0.57150 -0.035260 10 0.47627 0.50687 -0.0306042 6.3341e-02 4.7108e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.18038127 0.50941 insignificant 1.000000 1 insignificant -0.015591 0.699070 insignificant 1.0000 insignificant 0.53339 0.68734 -0.1258928 9 0.47627 0.60171 -0.12544056 9.9371e-01 2.9956e-11 weaklyHypometh 1.000000 2.9956e-08 weaklyHypometh 0.9837809 1.4460e-07 weaklyHypometh 1.00000 0.0001446 weaklyHypometh -0.1209476 0.0007846 weaklyHypometh 0.63173 insignificant 0.57150 0.68734 -0.088792 9 0.50687 0.60171 -0.094836 9.9944e-01 2.0364e-03 weaklyHypometh 1.0000e+00 1.0718e-01 insignificant 0.9999804 0.00029302 weaklyHypometh 1 0.058604 weaklyHypometh -0.105356 0.0294398 weaklyHypometh 1.00000 insignificant chr21 15439541 15440541 154125 NRIP1 ENSG00000180530 0.71333 223 8 0.65693 195 8 0.51461 72 8 0.75242 189 8 0.70479 108 8 0.56898 100 8 0.60167 101 7 0.63832 136 8 0.59048 49 8 0.53750 54 5 0.60104 156 8 0.62381 63 7 0.60398 116 8 0.54505 114 8 0.56042 135 8 0.58333 55 7 1.00000 1 0 0.73676 512 8 0.61819 115 8 0.73277 111 7 0.80417 41 7 0.58333 12 0 0.70294 125 8 0.54241 51 8 0.85826 177 7 0.71429 81 8 0.55993 69 8 0.62411 53 7 0.64675 189 8 0.62694 95 8 0.68833 120 8 0.73889 74 8 0.56178 167 8 0.61683 92 7 0.40625 138 8 0.65625 21 0 0.54480 146 8 0.74167 106 8 0.75969 212 7 0.74421 158 7 0.72751 196 8 0.67506 176 7 0.75241 157 8 0.73388 0.68416 0.55515 0.82624 0.70347 0.69888 0.63388 0.66982 0.65040 0.57847 0.62226 0.64443 0.61988 0.59349 0.58389 0.57735 NA 0.75585 0.65855 0.79701 0.89872 0.60271 0.70035 0.57151 0.83386 0.72112 0.61347 0.60202 0.65662 0.67218 0.73616 0.83692 0.59947 0.65040 0.43397 0.64234 0.54893 0.76683 0.78956 0.76506 0.78053 0.75941 0.77638 4 0.67908 0.69273 -0.0212048 8 0.58051 0.60476 -0.0242530 9.1543e-01 0.18585913 insignificant 1.0000e+00 1.00000 insignificant 9.7325e-01 0.052976 insignificant 1.00000000 1 insignificant -2.9976e-02 0.425175 insignificant 1 insignificant 0.67934 0.55224 0.118372 8 0.65308 0.53674 0.116336 1.0448e-06 0.99994135 weaklyHypermeth 5.2240e-05 1.00000 weaklyHypermeth 9.9810e-03 0.79008 weaklyHypermeth 0.4158762 1 insignificant 0.056289 0.3147371 insignificant 1.00000 insignificant 0.67934 0.77753 -0.0799782 7 0.65308 0.73548 -0.082408 9.9516e-01 2.9354e-03 weaklyHypometh 1.0000e+00 0.5870825 insignificant 9.9227e-01 3.2801e-04 weaklyHypometh 1.000000 0.164005 insignificant -0.087557 0.006076 weaklyHypometh 1 insignificant 0.69337 0.55224 0.141805 8 0.68036 0.53674 0.1436209 1.9777e-05 1.0000e+00 weaklyHypermeth 1.0409e-03 1.000000 weaklyHypermeth 0.00377621 0.99603 weaklyHypermeth 0.236013 1 insignificant 0.086265 0.146432 insignificant 1.0000 insignificant 0.69337 0.77753 -0.0694265 7 0.68036 0.73548 -0.05512322 9.4578e-01 3.1770e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9619005 3.2900e-02 weaklyHypometh 1.00000 1.0000000 insignificant -0.0575805 0.0888754 insignificant 1.00000 insignificant 0.55224 0.77753 -0.211143 7 0.53674 0.73548 -0.198744 9.9975e-01 1.7993e-07 hypomethylated 1.0000e+00 4.9736e-05 hypomethylated 0.9992229 0.00089743 hypomethylated 1 0.128204 insignificant -0.143846 0.0256025 weaklyHypometh 1.00000 insignificant chr21 16458550 16459550 154206 ENSG00000220416 0.69979 192 6 0.70347 94 6 0.57285 109 6 0.64838 127 6 0.74286 38 6 0.71525 308 6 0.72729 77 6 0.72115 68 5 0.67849 109 6 0.73063 81 5 0.66858 156 6 0.60152 64 6 0.73254 94 5 NA 0 0 0.66111 104 6 0.65055 47 6 0.60755 98 6 0.72492 137 6 0.68226 211 6 0.72602 219 6 0.64352 42 4 0.78644 44 6 0.75686 156 6 0.74566 52 5 0.62500 42 5 0.75188 194 6 0.57017 54 5 0.67670 66 4 0.72192 85 6 0.71194 162 6 0.69315 152 6 0.71259 343 6 0.63547 139 6 0.56323 98 6 0.63872 132 6 0.70614 77 4 0.66429 62 6 0.69069 244 6 0.70945 203 6 0.74333 214 6 0.72445 116 6 0.67720 213 6 0.74200 174 6 0.71467 0.67940 0.53588 0.67621 0.74257 0.66858 0.69448 0.65571 0.67216 0.71285 0.65999 0.54638 0.72949 NA 0.63435 0.60249 0.57315 0.70427 0.67789 0.68775 0.61830 0.76910 0.72977 0.68713 0.57487 0.77350 0.56109 0.67889 0.71580 0.70013 0.63960 0.69682 0.61646 0.50274 0.62543 0.66463 0.67973 0.65403 0.69698 0.72493 0.71803 0.65557 0.71667 4 0.67895 0.70115 -0.0316544 6 0.68045 0.71430 -0.0338450 9.9287e-01 0.07121436 insignificant 1.0000e+00 1.00000 insignificant 9.6121e-01 0.244382 insignificant 1.00000000 1 insignificant -1.5695e-02 0.469160 insignificant 1 insignificant 0.67895 0.62766 0.035005 6 0.68045 0.65175 0.028700 3.9676e-02 0.96457515 weaklyHypermeth 1.0000e+00 1.00000 insignificant 4.1371e-02 0.98072 weaklyHypermeth 1.0000000 1 insignificant 0.034203 0.1849017 insignificant 1.00000 insignificant 0.67895 0.72717 -0.0355779 6 0.68045 0.71797 -0.037520 9.8730e-01 1.1402e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7300e-01 6.9152e-02 insignificant 1.000000 1.000000 insignificant -0.035328 0.056260 insignificant 1 insignificant 0.70115 0.62766 0.067032 6 0.71430 0.65175 0.0625451 2.5197e-03 9.9958e-01 weaklyHypermeth 1.0955e-01 1.000000 insignificant 0.03704446 0.99154 weaklyHypermeth 1.000000 1 insignificant 0.049898 0.093324 insignificant 1.0000 insignificant 0.70115 0.72717 -0.0026581 6 0.71430 0.71797 -0.00367472 7.3394e-01 4.8990e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8216961 4.7401e-01 insignificant 1.00000 1.0000000 insignificant -0.0196328 0.3804216 insignificant 1.00000 insignificant 0.62766 0.72717 -0.070137 6 0.65175 0.71797 -0.066220 9.9890e-01 6.9253e-03 weaklyHypometh 1.0000e+00 3.0110e-01 insignificant 0.9920020 0.01034965 weaklyHypometh 1 0.529416 insignificant -0.069531 0.0204835 weaklyHypometh 1.00000 insignificant chr21 25780933 25781933 154614 NCRNA00158 ENSG00000185433 0.71667 86 5 0.57240 93 5 0.75851 55 5 0.66722 67 5 0.77518 44 5 0.72144 143 5 0.72667 50 5 0.69175 89 5 0.56655 39 5 0.77444 42 5 0.69598 131 5 0.90000 14 0 0.82828 54 5 0.55333 31 5 0.63905 50 3 0.63333 10 0 0.79167 14 0 0.68919 88 4 0.64974 55 5 0.77079 153 5 0.77500 38 5 0.53750 35 4 0.72359 54 5 0.72929 39 4 0.57500 20 1 0.57626 124 5 0.64086 67 5 0.65000 16 0 0.74643 47 5 0.70550 106 5 0.64086 113 5 0.74449 153 5 0.57805 95 5 0.55238 52 5 0.63567 72 5 0.66667 3 0 0.53346 66 5 0.61805 97 5 0.69402 59 5 0.68205 92 5 0.68000 38 3 0.63333 28 3 0.70769 48 3 0.76337 0.70809 0.78596 0.74005 0.82595 0.74560 0.74897 0.72481 0.57580 0.78224 0.75900 0.87654 0.81544 0.55144 0.67695 0.67078 0.70988 0.73895 0.69057 0.81176 0.81481 0.57639 0.73140 0.76301 0.59414 0.71508 0.70896 0.69136 0.77513 0.73574 0.67802 0.72026 0.61945 0.64139 0.68519 0.61804 0.57063 0.64243 0.77313 0.72143 0.72840 0.67078 0.76258 0 0.74465 0.70813 0.0365587 5 0.68131 0.65168 0.0296281 6.6038e-02 0.95009980 insignificant 1.0000e+00 1.00000 insignificant 1.2361e-01 0.945064 insignificant 1.00000000 1 insignificant 3.5712e-02 0.248149 lowCoverage 1 lowCoverage 0.74502 0.62597 0.116573 5 0.71757 0.59218 0.125388 9.1444e-06 0.99999598 weaklyHypermeth 4.3545e-04 1.00000 weaklyHypermeth 3.4841e-04 0.99999 weaklyHypermeth 0.0217753 1 weaklyHypermeth 0.108731 0.0019305 lowCoverage 0.12870 lowCoverage 0.74502 0.75094 0.0088192 5 0.71757 0.68222 0.035349 1.0700e-01 2.4332e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.7800e-01 8.3318e-02 insignificant 1.000000 1.000000 insignificant 0.026691 0.271555 lowCoverage 1 lowCoverage 0.70864 0.62597 0.081128 5 0.68202 0.59218 0.0898342 1.4868e-04 9.9432e-01 weaklyHypermeth 7.0802e-03 1.000000 weaklyHypermeth 0.01029656 0.99195 weaklyHypermeth 0.447677 1 insignificant 0.073019 0.032270 lowCoverage 1.0000 lowCoverage 0.70864 0.75094 -0.0272550 5 0.68202 0.68222 -0.00020466 1.5212e-01 1.7277e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.4713014 7.8091e-02 insignificant 1.00000 1.0000000 insignificant -0.0090207 0.7320944 lowCoverage 1.00000 lowCoverage 0.62597 0.75094 -0.100637 5 0.59218 0.68222 -0.090039 8.5549e-01 6.6225e-06 weaklyHypometh 1.0000e+00 1.1038e-03 weaklyHypometh 0.9077363 0.00688364 weaklyHypometh 1 0.458909 insignificant -0.082040 0.0100410 lowCoverage 1.00000 lowCoverage chr21 29196976 29197976 154722 ENSG00000215317 0.92474 473 6 0.89904 199 6 0.91369 86 6 0.96872 359 6 0.91071 68 6 0.93374 396 6 0.88158 106 6 0.93776 127 6 0.97436 54 6 0.96242 106 6 0.92529 196 6 0.89583 36 3 0.99275 86 6 0.94066 65 6 0.90409 135 6 0.97917 54 6 NA 0 0 0.94451 561 6 0.95100 187 6 0.91884 312 6 0.81888 32 3 1.00000 22 3 0.94412 217 6 0.84286 55 6 1.00000 27 3 0.90735 166 6 0.90073 145 6 0.68006 43 3 0.93382 152 6 0.93896 183 6 0.80230 178 6 0.93674 285 6 0.83264 119 6 0.63703 202 6 0.85417 236 3 0.75000 4 0 0.61553 74 6 0.76726 271 6 0.91819 462 6 0.95979 299 6 0.82700 311 6 0.92843 346 6 0.94539 281 6 0.91503 0.88514 0.94669 0.97065 0.97671 0.93274 0.85564 0.98106 0.95541 0.94913 0.92535 0.88043 0.98740 0.96399 0.94100 0.96377 NA 0.94363 0.97638 0.92828 0.92236 1.00000 0.90902 0.92381 1.00000 0.95405 0.89051 0.75086 0.95812 0.95091 0.93841 0.93555 0.93581 0.84263 0.82497 0.66192 0.80817 0.87374 0.94845 0.98046 0.98217 0.94301 0.96416 3 0.93233 0.92672 0.0062717 6 0.93894 0.93402 0.0049272 3.2639e-01 0.89408348 insignificant 1.0000e+00 1.00000 insignificant 7.8472e-01 0.734169 insignificant 1.00000000 1 insignificant 4.2529e-02 0.146503 insignificant 1 insignificant 0.93233 0.82762 0.107107 6 0.93894 0.72107 0.217869 3.9564e-19 0.95208613 weaklyHypermeth 9.8910e-17 1.00000 weaklyHypermeth 3.2128e-05 0.99676 weaklyHypermeth 0.0045897 1 weaklyHypermeth 0.191908 0.0045623 lowCoverage 0.28515 lowCoverage 0.93233 0.94408 -0.0140339 6 0.93894 0.80560 0.133340 9.6658e-01 1.6558e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.8737e-01 4.3864e-01 insignificant 1.000000 1.000000 insignificant 0.018919 0.474149 insignificant 1 insignificant 0.92487 0.82671 0.118383 6 0.81726 0.63094 0.1863240 1.4458e-09 9.1294e-01 weaklyHypermeth 1.8073e-07 1.000000 weaklyHypermeth 0.00859906 0.99175 weaklyHypermeth 0.392611 1 insignificant 0.149379 0.011950 lowCoverage 0.7967 lowCoverage 0.92672 0.94408 -0.0204812 6 0.93402 0.80560 0.12841234 9.6790e-01 1.2409e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5473741 4.8832e-01 insignificant 1.00000 1.0000000 insignificant -0.0236099 0.5155175 insignificant 1.00000 insignificant 0.82762 0.94408 -0.126104 6 0.72107 0.80560 -0.084529 9.8269e-01 1.1413e-07 weaklyHypometh 1.0000e+00 4.9736e-05 weaklyHypometh 0.9991334 0.00192611 weaklyHypometh 1 0.214013 insignificant -0.172989 0.0060953 lowCoverage 0.95171 lowCoverage chr21 31628620 31629620 154807 ENSG00000216276 0.92351 336 5 0.85324 749 5 0.88515 144 5 0.79839 352 5 0.78791 133 5 0.94575 548 5 0.84463 190 5 0.77065 213 5 0.91623 127 5 0.93423 85 5 0.88296 393 5 0.70285 47 4 0.94509 136 5 0.94038 99 5 0.91603 179 5 0.85417 31 3 0.00000 1 0 0.71943 313 5 0.90877 395 5 0.92595 443 5 0.81153 89 5 0.79048 59 3 0.77268 248 5 0.86325 141 5 0.88394 64 4 0.95270 565 5 0.69053 138 6 0.84848 88 4 0.75301 343 5 0.85556 609 5 0.79408 584 5 0.78813 376 5 0.54307 324 5 0.76806 123 4 0.81176 290 4 0.33333 4 0 0.72064 303 5 0.45995 555 5 0.93260 460 5 0.80294 353 5 0.81464 326 4 0.89835 266 5 0.93417 304 6 0.90996 0.86766 0.86564 0.94995 0.91816 0.94437 0.92946 0.93873 0.91047 0.93329 0.92006 0.77455 0.94786 0.94034 0.92220 0.66302 NA 0.93127 0.92570 0.94630 0.94116 0.97703 0.90904 0.92879 0.91136 0.94917 0.84617 0.97551 0.96379 0.96308 0.95385 0.94574 0.61315 0.77691 0.78397 0.66271 0.77872 0.58061 0.92141 0.92342 0.92617 0.87430 0.89853 3 0.91514 0.94268 -0.0262645 5 0.74500 0.82026 -0.0752613 9.9767e-01 0.00027436 weaklyHypometh 1.0000e+00 0.27436 insignificant 9.8860e-01 0.012945 weaklyHypometh 1.00000000 1 insignificant 5.7353e-03 0.910392 lowCoverage 1 lowCoverage 0.91526 0.68793 0.231339 5 0.82666 0.57922 0.247441 2.4749e-11 0.99999746 hypermethylated 2.4749e-09 1.00000 hypermethylated 1.1100e-03 0.99980 weaklyHypermeth 0.0616653 1 weaklyHypermeth 0.216632 0.0406987 lowCoverage 1.00000 lowCoverage 0.91514 0.91750 -0.0032220 5 0.74500 0.84402 -0.099025 9.2109e-01 2.2418e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.5947e-01 7.2682e-01 insignificant 1.000000 1.000000 insignificant -0.053773 0.334201 lowCoverage 1 lowCoverage 0.94293 0.68793 0.255992 5 0.84368 0.57922 0.2644558 1.0612e-08 9.9999e-01 hypermethylated 9.0916e-07 1.000000 hypermethylated 0.00014504 0.99987 hypermethylated 0.018357 1 hypermethylated 0.210896 0.041371 lowCoverage 1.0000 lowCoverage 0.94268 0.91750 0.0234999 5 0.82026 0.84402 -0.02376328 9.3403e-02 9.1912e-01 insignificant 1.000000 1.0000e+00 insignificant 0.1110153 9.2992e-01 insignificant 1.00000 1.0000000 insignificant -0.0595086 0.1237241 lowCoverage 1.00000 lowCoverage 0.68793 0.91740 -0.229916 5 0.57922 0.84759 -0.268362 9.9957e-01 9.7574e-04 hypomethylated 1.0000e+00 6.2342e-02 hypomethylated 0.9980335 0.00878527 weaklyHypometh 1 0.516781 insignificant -0.270405 0.0160127 lowCoverage 1.00000 lowCoverage chr21 32209399 32210399 154823 HUNK ENSG00000142149 0.71136 163 6 0.77302 56 3 0.76190 64 3 0.73524 137 7 0.85820 36 3 0.63884 236 7 0.74369 36 3 0.81105 70 3 0.85931 35 3 0.93056 56 3 0.91936 102 3 0.88037 46 3 0.86590 66 3 0.87500 8 1 0.82292 72 3 0.79643 25 3 0.49893 688 6 0.71891 115 6 0.77225 116 6 0.76282 163 6 0.84341 28 3 0.77249 32 3 0.79027 95 6 0.84615 36 3 0.91071 23 3 0.61815 198 7 0.93254 48 3 0.84848 30 3 0.81502 80 3 0.74707 172 6 0.76118 149 7 0.79180 213 7 0.74747 77 3 0.63384 67 3 0.49569 130 6 0.79167 53 4 0.72963 39 3 0.75042 169 7 0.84565 175 7 0.72270 213 7 0.84153 180 7 0.70548 155 6 0.79360 248 7 0.81376 0.76247 0.76572 0.85048 0.86590 0.85069 0.74290 0.80990 0.86543 0.93143 0.92039 0.87010 0.87990 0.84355 0.84941 0.80000 0.81157 0.85998 0.88437 0.84797 0.85461 0.80752 0.76945 0.86978 0.90945 0.81575 0.93288 0.87473 0.82029 0.86672 0.86268 0.87627 0.76963 0.66333 0.75451 0.86253 0.73193 0.77954 0.90808 0.89901 0.90568 0.90772 0.88903 3 0.80393 0.83062 -0.0129765 6 0.58825 0.67211 -0.0838630 9.9185e-01 0.04612320 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.6610e-01 0.095253 insignificant 1.00000000 1 insignificant -1.9636e-02 0.554058 lowCoverage 1 lowCoverage 0.80393 0.74766 0.074080 6 0.58825 0.66318 -0.074934 9.6086e-04 0.52252937 weaklyHypermeth 3.8434e-02 1.00000 weaklyHypermeth 8.5073e-02 0.58477 insignificant 1.0000000 1 insignificant 0.095349 0.0942863 lowCoverage 1.00000 lowCoverage 0.80773 0.85788 -0.0515414 6 0.77760 0.71969 0.057908 9.6585e-01 6.9397e-04 weaklyHypometh 1.0000e+00 0.2313232 insignificant 9.6867e-01 2.2657e-03 weaklyHypometh 1.000000 0.755232 insignificant 0.005010 0.895044 lowCoverage 1 lowCoverage 0.83062 0.74766 0.087388 6 0.67211 0.66318 0.0089293 2.6629e-03 9.8667e-01 weaklyHypermeth 1.1095e-01 1.000000 insignificant 0.06818494 0.99303 insignificant 1.000000 1 insignificant 0.114986 0.052733 lowCoverage 1.0000 lowCoverage 0.83257 0.85788 -0.0451797 6 0.68457 0.71969 -0.03511376 9.8381e-01 4.9350e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9546920 9.8421e-02 insignificant 1.00000 1.0000000 insignificant 0.0246464 0.5282254 lowCoverage 1.00000 lowCoverage 0.74570 0.85788 -0.132450 6 0.59938 0.71969 -0.120308 1.0000e+00 6.1681e-06 weaklyHypometh 1.0000e+00 1.1038e-03 weaklyHypometh 0.9992966 0.00112604 weaklyHypometh 1 0.140755 insignificant -0.090339 0.1275246 lowCoverage 1.00000 lowCoverage chr21 33212680 33213680 154841 ENSG00000207098 0.77078 68 5 0.63513 185 5 0.40952 50 3 0.54725 112 5 0.46494 45 5 0.75132 41 2 0.52755 62 5 0.67670 52 5 0.45000 13 0 1.00000 3 0 0.74810 166 5 0.76000 21 3 0.41667 12 0 0.75000 6 0 0.54333 16 1 0.80000 7 0 NA 0 0 0.68819 23 3 1.00000 11 0 0.57677 32 2 0.78286 30 5 1.00000 12 0 0.60595 36 5 0.70000 15 1 0.69103 54 5 0.40275 105 5 0.48611 20 0 0.75000 8 0 0.60000 7 0 0.49762 142 5 0.52616 151 5 0.86232 71 5 0.73421 50 2 0.80000 22 2 NA 0 0 0.39111 37 5 0.85121 91 5 0.89281 165 5 0.15610 160 5 0.43158 95 5 0.54567 180 5 0.60000 11 0 0.43534 138 5 0.79444 0.78077 0.57143 0.67471 0.81818 0.83333 0.85000 0.82784 0.66667 1.00000 0.89113 0.93333 0.69444 0.92561 0.73889 1.00000 NA 0.58426 1.00000 0.83333 0.77143 1.00000 0.80159 0.60000 0.83333 0.55556 0.72222 0.75000 1.00000 0.66270 0.67901 1.00000 0.75000 0.66667 NA 0.51852 0.80044 0.95694 0.18691 0.50877 0.72947 0.66667 0.43434 0 0.63164 0.52688 0.0912623 5 0.54463 0.55799 -0.0133588 1.4763e-02 0.94192061 weaklyHypermeth 1.0000e+00 1.00000 insignificant 4.2632e-01 0.845207 insignificant 1.00000000 1 insignificant 1.7876e-05 0.999780 lowCoverage 1 lowCoverage 0.63301 0.79178 -0.159644 5 0.65356 0.79066 -0.137101 9.7453e-01 0.00029828 weaklyHypometh 1.0000e+00 0.14914 insignificant 5.0127e-01 0.16027 insignificant 1.0000000 1 insignificant -0.075119 0.4751066 lowCoverage 1.00000 lowCoverage 0.63301 0.38356 0.2667907 5 0.65356 0.37552 0.278038 2.8889e-10 1.0000e+00 hypermethylated 2.8889e-07 1.0000000 hypermethylated 5.5598e-05 9.9993e-01 hypermethylated 0.013899 1.000000 hypermethylated 0.225012 0.038250 lowCoverage 1 lowCoverage 0.52696 0.79178 -0.275466 5 0.56959 0.79066 -0.2210706 9.9707e-01 1.0782e-05 hypomethylated 1.0000e+00 0.010782 hypomethylated 0.68525796 0.20157 insignificant 1.000000 1 insignificant -0.075137 0.489297 lowCoverage 1.0000 lowCoverage 0.52696 0.38356 0.1656228 5 0.56959 0.37552 0.19406880 8.9572e-05 9.9663e-01 weaklyHypermeth 0.017914 1.0000e+00 weaklyHypermeth 0.0021420 9.9173e-01 weaklyHypermeth 0.35699 1.0000000 insignificant 0.2249940 0.0406698 lowCoverage 1.00000 lowCoverage 0.79178 0.38356 0.444873 5 0.79066 0.37552 0.415139 3.3488e-08 1.0000e+00 hypermethylated 3.3488e-05 1.0000e+00 hypermethylated 0.0012243 0.99983457 weaklyHypermeth 1 1.000000 insignificant 0.300131 0.0351136 lowCoverage 1.00000 lowCoverage chr21 36736362 36737362 155010 ENSG00000219968 0.8301544 290 6 0.7370236 153 6 0.670046 101 6 0.8362167 152 6 0.8010323 73 6 0.749377 277 6 0.685533 149 6 0.680419 90 6 0.769277 103 6 0.718874 119 6 0.7528660 196 6 0.732323 69 6 0.7736111 124 6 NA 0 0 0.726363 135 6 0.803092 90 6 0.694335 105 6 0.7933882 189 6 0.7842734 174 6 0.787417 276 6 0.6132120 65 4 0.7391791 64 6 0.778737 198 6 0.778680 80 6 0.719199 61 6 0.888998 166 6 0.799839 104 6 0.8568723 39 4 0.752747 100 6 0.829181 160 6 0.7884132 196 6 0.799055 322 6 0.7027880 66 6 0.618397 102 6 0.7182792 136 6 0.778949 99 6 0.6970899 85 6 0.7310207 179 6 0.8189992 253 6 0.8748689 254 6 0.8354570 173 6 0.819699 281 6 0.804829 290 6 0.8433426 0.747650 0.678597 0.8429889 0.8274950 0.765308 0.729267 0.711381 0.781146 0.737052 0.7697829 0.768445 0.775531 NA 0.756346 0.830009 0.7097818 0.8035853 0.8067311 0.8057326 0.6370976 0.7501762 0.784978 0.808142 0.728285 0.885124 0.8021271 0.854949 0.788541 0.843172 0.7999697 0.817084 0.731332 0.625296 0.7376624 0.790562 0.703215 0.7405468 0.8299981 0.8804299 0.8518390 0.833693 0.805931 6 0.779058 0.802572 -0.01740203 6 0.764108 0.789064 -0.02495620 9.4692e-01 1.3625e-01 insignificant 1.000000 1.0000000 insignificant 0.96704 7.5730e-02 insignificant 1 1.0000000 insignificant -0.02469596 0.30520507 insignificant 1.00000 insignificant 0.779058 0.7196402 0.0627714 6 0.764108 0.7057899 0.05831818 1.5690e-03 9.9936e-01 weaklyHypermeth 1.5086e-02 1.0000e+00 weaklyHypermeth 2.7124e-02 9.9477e-01 weaklyHypermeth 2.8254e-01 1.00000000 insignificant 4.6226e-02 9.3839e-02 insignificant 8.6596e-01 insignificant 0.779058 0.8417266 -0.0596495 6 0.764108 0.830582 -0.06647432 9.9601e-01 6.6664e-04 weaklyHypometh 1.0000e+00 1.6666e-01 insignificant 9.9978e-01 8.0204e-05 weaklyHypometh 1.0000e+00 0.02673453 weaklyHypometh -0.07679063 5.5598e-04 weaklyHypometh 0.06949723 weaklyHypometh 0.802572 0.7196402 0.0799191 6 0.789064 0.7057899 0.0832744 3.0356e-04 9.9965e-01 weaklyHypermeth 3.3729e-03 1.0000e+00 weaklyHypermeth 7.1372e-03 9.9985e-01 weaklyHypermeth 9.0345e-02 1.000000 weaklyHypermeth 0.0709220 3.2186e-02 weaklyHypermeth 3.8684e-01 insignificant 0.802572 0.8417266 -0.0382438 6 0.789064 0.830582 -0.0415181 9.9227e-01 1.5816e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9284e-01 2.9907e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0520947 4.3992e-02 weaklyHypometh 1.0000000 insignificant 0.7196402 0.8417266 -0.1160286 6 0.7057899 0.830582 -0.1247925 9.9998e-01 2.4800e-06 weaklyHypometh 1.0000e+00 7.7500e-05 weaklyHypometh 9.9996e-01 4.9688e-05 weaklyHypometh 1.0000e+00 2.4844e-03 weaklyHypometh -0.1230166 1.1928e-03 weaklyHypometh 4.2598e-02 weaklyHypometh chr21 41788589 41789589 155105 TMPRSS2 ENSG00000184012 0.7026539 195 5 0.6911579 143 5 0.544902 100 5 0.7209954 109 5 0.6481203 59 5 0.679238 398 5 0.715996 110 5 0.771238 76 5 0.726190 63 5 0.698265 76 5 0.6276559 129 5 0.574762 62 5 0.7307792 125 5 NA 0 0 0.760476 96 5 0.499048 45 5 0.579830 99 5 0.7338680 128 5 0.6506583 140 5 0.703750 283 5 0.5795455 31 3 0.6400000 47 5 0.664238 134 5 0.475000 29 3 0.746667 32 3 0.711408 270 5 0.648990 30 3 0.7600000 31 3 0.665704 128 5 0.696227 260 5 0.7394008 272 5 0.669629 314 5 0.5697122 129 5 0.451356 91 5 0.5647510 177 5 0.520000 31 4 0.6231235 67 5 0.6800556 220 5 0.7273142 196 5 0.7558464 200 5 0.7100299 153 5 0.783385 176 5 0.727866 193 5 0.6079056 0.639916 0.470851 0.6129519 0.5991579 0.589988 0.652220 0.700716 0.660952 0.597430 0.5756071 0.430324 0.628379 NA 0.703505 0.401295 0.4668458 0.6667950 0.5585580 0.6062527 0.5058612 0.6756000 0.619628 0.536000 0.756000 0.628500 0.5854167 0.657600 0.568605 0.598656 0.6399296 0.569559 0.565277 0.482625 0.4829425 0.508600 0.551899 0.6002805 0.6482076 0.6726846 0.6043586 0.689354 0.652189 3 0.715517 0.688847 -0.01267384 5 0.679627 0.692453 -0.01282614 9.0285e-01 3.4765e-01 insignificant 1.000000 1.0000000 insignificant 0.91737 1.3069e-01 insignificant 1 1.0000000 insignificant 0.00515634 0.85862212 lowCoverage 1.00000 lowCoverage 0.715517 0.6041958 0.1219363 5 0.679627 0.5835176 0.09610973 1.1137e-04 9.9357e-01 weaklyHypermeth 1.2239e-03 1.0000e+00 weaklyHypermeth 4.3068e-03 9.8799e-01 weaklyHypermeth 5.6669e-02 1.00000000 weaklyHypermeth 1.0339e-01 2.2498e-02 lowCoverage 3.2140e-01 lowCoverage 0.715517 0.7995643 -0.0629331 5 0.679627 0.742478 -0.06285034 9.9869e-01 1.5286e-03 weaklyHypometh 1.0000e+00 3.0571e-01 insignificant 9.9509e-01 1.3227e-03 weaklyHypometh 1.0000e+00 0.26454710 insignificant -0.06933118 4.7804e-03 lowCoverage 0.26213077 lowCoverage 0.688847 0.6041958 0.1252710 5 0.692453 0.5835176 0.1089359 2.0522e-04 9.9611e-01 weaklyHypermeth 2.3058e-03 1.0000e+00 weaklyHypermeth 5.7227e-03 9.9526e-01 weaklyHypermeth 7.7334e-02 1.000000 weaklyHypermeth 0.0982343 3.2495e-02 lowCoverage 3.8684e-01 lowCoverage 0.688847 0.7995643 -0.0499348 5 0.692453 0.742478 -0.0500242 9.9716e-01 1.4717e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3519e-01 7.4637e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0744875 1.2385e-02 lowCoverage 0.5629709 lowCoverage 0.6041958 0.7995643 -0.1857821 5 0.5835176 0.742478 -0.1589601 9.9975e-01 3.0843e-04 weaklyHypometh 1.0000e+00 6.2945e-03 weaklyHypometh 9.9994e-01 2.2411e-04 weaklyHypometh 1.0000e+00 8.9646e-03 weaklyHypometh -0.1727218 2.0431e-03 lowCoverage 6.3846e-02 lowCoverage chr22 15557680 15558680 155167 ENSG00000189295 0.8651231 292 9 0.8051872 188 8 0.794557 175 9 0.8538727 176 6 0.8230159 94 8 0.817830 285 9 0.806557 213 9 0.898608 193 9 0.814685 176 9 0.899705 138 6 0.8545628 222 9 0.877227 95 6 0.8126637 140 7 0.921212 34 4 0.884110 197 8 0.953125 85 7 0.883627 105 5 0.7657467 350 6 0.9056407 245 9 0.831591 287 9 0.8480575 74 7 0.8285714 39 2 0.918822 213 9 0.891534 65 7 0.928800 109 6 0.877751 253 10 0.867940 120 8 0.7259133 70 7 0.749911 272 9 0.916574 283 10 0.9133746 265 9 0.894125 291 9 0.6912722 239 9 0.641308 223 9 0.8325868 246 7 0.721753 55 7 0.7400462 161 10 0.7660040 304 9 0.8569001 280 9 0.8581601 252 9 0.7550713 248 8 0.874122 315 9 0.930526 188 9 0.9083424 0.842078 0.815719 0.8846798 0.8845341 0.920848 0.847619 0.919600 0.833207 0.908431 0.8854719 0.880587 0.837597 0.903394 0.926399 0.950257 0.8692912 0.8636365 0.9232788 0.8828656 0.8024990 0.8673582 0.914583 0.928159 0.941570 0.900613 0.8887147 0.820074 0.889707 0.944443 0.9245013 0.916410 0.729117 0.762616 0.8422339 0.785726 0.822228 0.8378388 0.9177784 0.9104501 0.8358998 0.926998 0.967082 3 0.886690 0.904832 -0.01784409 9 0.793738 0.728161 0.06557675 9.9895e-01 8.8999e-02 insignificant 1.000000 1.0000000 insignificant 0.91156 3.7382e-01 insignificant 1 1.0000000 insignificant -0.01001554 0.65374462 insignificant 1.00000 insignificant 0.886690 0.7885246 0.1063846 9 0.793738 0.7072407 0.08649716 1.9053e-13 9.7272e-01 weaklyHypermeth 4.3517e-12 1.0000e+00 weaklyHypermeth 2.5722e-05 9.6400e-01 weaklyHypermeth 6.1243e-04 1.00000000 weaklyHypermeth 1.2127e-01 4.2989e-03 weaklyHypermeth 8.5978e-02 weaklyHypermeth 0.886869 0.8854248 -0.0128634 9 0.859013 0.865232 -0.00621890 6.3777e-01 1.3690e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7965e-01 1.2933e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00152355 9.6186e-01 insignificant 1.00000000 insignificant 0.905439 0.7903752 0.1285550 9 0.812577 0.7526953 0.0598814 1.3247e-13 8.5088e-01 weaklyHypermeth 4.0142e-12 1.0000e+00 weaklyHypermeth 6.8558e-05 9.3329e-01 weaklyHypermeth 1.5581e-03 1.000000 weaklyHypermeth 0.1312860 2.3959e-03 weaklyHypermeth 5.7044e-02 weaklyHypermeth 0.905726 0.8854248 0.0085064 9 0.889975 0.865232 0.0247428 5.7362e-02 4.4878e-01 insignificant 6.9953e-01 1.0000e+00 insignificant 2.0416e-01 3.6214e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0084920 8.0999e-01 insignificant 1.0000000 insignificant 0.7891269 0.8854248 -0.1255297 9 0.7255164 0.865232 -0.1397154 9.9722e-01 5.5673e-08 weaklyHypometh 1.0000e+00 2.2269e-06 weaklyHypometh 9.9895e-01 5.6613e-05 weaklyHypometh 1.0000e+00 2.6959e-03 weaklyHypometh -0.1227941 1.2070e-02 weaklyHypometh 2.4139e-01 insignificant chr22 15992084 15993084 155179 CECR6 ENSG00000183307 0.8198887 144 5 0.8224483 93 5 0.745192 84 5 0.8938424 109 5 0.8000000 50 5 0.767941 203 5 0.820085 75 4 0.905658 86 5 0.826293 63 5 0.900766 59 5 0.8476206 173 5 0.800000 33 3 0.8273735 99 5 0.833333 24 2 0.860702 82 5 0.747672 48 4 0.780915 46 4 0.8608497 88 5 0.8599736 123 5 0.892627 218 5 0.7201527 77 3 0.7180031 74 5 0.917835 117 5 0.797222 76 4 0.741667 42 5 0.809853 115 5 0.784374 87 5 0.7826840 32 3 0.930309 81 4 0.820184 111 5 0.7865372 114 5 0.868424 239 5 0.7714286 99 5 0.714775 78 5 0.7091419 186 5 0.704040 47 4 0.7527419 56 4 0.8117399 117 5 0.9328791 146 5 0.8683892 151 5 0.9153030 88 4 0.880089 154 4 0.904545 119 5 0.8469604 0.784978 0.746712 0.9039836 0.8391137 0.800945 0.815881 0.914697 0.824330 0.901576 0.8525555 0.781631 0.851516 0.824276 0.866322 0.789321 0.7795308 0.8659016 0.8570419 0.9139361 0.7332970 0.7272680 0.933795 0.802746 0.750482 0.843320 0.8135113 0.780572 0.947871 0.837701 0.8413751 0.885605 0.808629 0.762149 0.8168591 0.736329 0.783913 0.8559220 0.9445442 0.8717584 0.9160799 0.885424 0.890502 3 0.845263 0.846352 0.00236366 5 0.837835 0.826031 0.01180364 3.9982e-01 7.2559e-01 insignificant 1.000000 1.0000000 insignificant 0.29950 8.5818e-01 insignificant 1 1.0000000 insignificant 0.02422196 0.30084293 lowCoverage 1.00000 lowCoverage 0.845263 0.7770154 0.0692921 5 0.837835 0.7440355 0.09379914 1.0344e-04 9.6387e-01 weaklyHypermeth 1.1494e-03 1.0000e+00 weaklyHypermeth 2.3332e-03 9.9677e-01 weaklyHypermeth 3.6456e-02 1.00000000 weaklyHypermeth 8.6681e-02 2.0771e-03 lowCoverage 5.1928e-02 lowCoverage 0.845263 0.8814590 -0.0532559 5 0.837835 0.899310 -0.06147527 9.9867e-01 3.9613e-03 weaklyHypometh 1.0000e+00 4.4015e-01 insignificant 9.9965e-01 1.6080e-03 weaklyHypometh 1.0000e+00 0.26800317 insignificant -0.06958211 9.2098e-04 lowCoverage 0.08755529 lowCoverage 0.846352 0.7770154 0.0708696 5 0.826031 0.7440355 0.0819955 4.2393e-03 9.7636e-01 weaklyHypermeth 3.8892e-02 1.0000e+00 weaklyHypermeth 2.2343e-02 9.8768e-01 weaklyHypermeth 2.3274e-01 1.000000 insignificant 0.0624592 3.2464e-02 lowCoverage 3.8684e-01 lowCoverage 0.846352 0.8814590 -0.0558933 5 0.826031 0.899310 -0.0732789 9.9918e-01 2.3620e-03 weaklyHypometh 1.0000e+00 3.3743e-01 insignificant 9.9996e-01 1.2334e-03 weaklyHypometh 1.0000e+00 0.616706 insignificant -0.0938041 1.0490e-03 lowCoverage 0.1311258 lowCoverage 0.7770154 0.8814590 -0.1018714 5 0.7440355 0.899310 -0.1552744 9.9989e-01 5.6583e-06 weaklyHypometh 1.0000e+00 1.6642e-04 weaklyHypometh 1.0000e+00 1.4154e-05 weaklyHypometh 1.0000e+00 7.8633e-04 weaklyHypometh -0.1562633 5.6210e-05 lowCoverage 4.3239e-03 lowCoverage chr22 16175167 16176167 155181 CECR1 ENSG00000093072 0.9467245 280 5 0.9248761 294 5 0.917641 148 5 0.9465581 369 5 0.8671224 89 5 0.940277 416 5 0.928259 104 5 0.947581 200 5 0.903858 157 5 0.956151 146 5 0.9260131 235 5 0.990476 55 5 0.9181481 165 5 0.958259 122 5 0.946033 229 5 0.963492 52 5 1.000000 16 2 0.9054069 344 5 0.9481530 141 5 0.945061 301 5 0.8910714 64 5 0.8770274 97 5 0.898396 183 5 0.923810 91 5 0.954474 97 5 0.956192 268 5 0.943137 62 5 0.9846154 88 5 0.977497 203 5 0.974649 325 5 0.9649487 267 5 0.940378 282 5 0.7025842 205 5 0.605062 52 5 1.0000000 56 1 0.750000 6 0 0.7484753 167 5 0.8228143 219 5 0.8557551 206 5 0.7646790 219 5 0.8794557 235 5 0.868284 219 5 0.843251 264 5 0.9479090 0.925861 0.923654 0.9478386 0.8852132 0.941113 0.932463 0.953677 0.910772 0.947465 0.9277104 0.989042 0.923175 0.959432 0.947236 0.969682 1.0000000 0.9081407 0.9485787 0.9351594 0.8837791 0.8622391 0.905260 0.933533 0.959794 0.960016 0.9412995 0.983585 0.972665 0.973996 0.9648017 0.942692 0.729973 0.614848 NA 0.707392 0.761752 0.8461480 0.8552616 0.7638224 0.8819005 0.880269 0.851517 5 0.935801 0.946719 -0.00885388 5 0.945711 0.951583 -0.00587180 9.5484e-01 3.2896e-01 insignificant 1.000000 1.0000000 insignificant 0.88104 5.6765e-01 insignificant 1 1.0000000 insignificant -0.00151170 0.90328920 lowCoverage 1.00000 lowCoverage 0.935768 0.7929078 0.1445631 5 0.934853 0.7544008 0.18045228 2.6009e-18 9.8213e-01 weaklyHypermeth 8.9688e-17 1.0000e+00 weaklyHypermeth 1.5148e-05 9.9052e-01 weaklyHypermeth 3.7870e-04 1.00000000 weaklyHypermeth 1.6752e-01 2.6879e-02 lowCoverage 3.7332e-01 lowCoverage 0.935768 0.8398950 0.0910270 5 0.934853 0.841164 0.09368957 2.4324e-09 1.0000e+00 weaklyHypermeth 1.6216e-07 1.0000e+00 weaklyHypermeth 4.4173e-07 1.0000e+00 weaklyHypermeth 5.9975e-05 1.00000000 weaklyHypermeth 0.09671959 6.6030e-03 lowCoverage 0.30013738 lowCoverage 0.946667 0.7929078 0.1543827 5 0.941899 0.7544008 0.1874984 3.6181e-11 9.8831e-01 weaklyHypermeth 9.2773e-10 1.0000e+00 weaklyHypermeth 4.3827e-05 9.6140e-01 weaklyHypermeth 1.1238e-03 1.000000 weaklyHypermeth 0.1690270 2.5622e-02 lowCoverage 3.3275e-01 lowCoverage 0.946667 0.8398950 0.0975041 5 0.941899 0.841164 0.1007357 8.0481e-07 9.9994e-01 weaklyHypermeth 3.8324e-05 1.0000e+00 weaklyHypermeth 1.1088e-05 1.0000e+00 weaklyHypermeth 1.5840e-03 1.000000 weaklyHypermeth 0.0982313 4.7119e-03 weaklyHypermeth 0.3707382 insignificant 0.7929078 0.8398950 -0.0601683 5 0.7544008 0.841164 -0.0867627 3.2456e-01 8.3678e-03 weaklyHypometh 1.0000e+00 9.9616e-02 weaklyHypometh 3.0669e-01 9.9330e-02 insignificant 1.0000e+00 9.7382e-01 insignificant -0.0707957 2.6513e-01 lowCoverage 1.0000e+00 lowCoverage chr22 18118380 18119380 155212 GP1BB ENSG00000203618 0.6798624 263 6 0.5362232 144 6 0.595601 122 6 0.6287391 260 6 0.8159555 61 6 0.729625 291 6 0.625567 68 6 0.776400 156 6 0.697727 88 4 0.735370 91 4 0.8872340 171 5 0.686469 62 4 0.7209318 208 6 0.846548 82 3 0.584408 138 4 0.367424 50 3 0.753788 37 1 0.6282825 588 6 0.7261318 226 6 0.779228 203 6 0.9452381 101 6 0.6489212 202 6 0.905232 88 6 0.547959 136 6 0.721606 456 6 0.686521 196 6 0.764878 123 6 0.6038889 69 4 0.874717 131 6 0.520823 225 6 0.7817495 143 6 0.902625 247 6 0.6244048 134 6 0.649904 226 6 0.6879075 168 6 0.721158 191 5 0.7867659 127 4 0.6704731 276 6 0.6522696 160 6 0.7507704 197 6 0.5921746 219 6 0.672925 325 6 0.556019 153 6 0.6884616 0.607674 0.673750 0.5967612 0.7337925 0.670976 0.705644 0.742170 0.680078 0.745940 0.8159222 0.586797 0.584288 0.711978 0.544229 0.433257 0.6914716 0.6188889 0.6485894 0.6002981 0.8800245 0.6365104 0.796361 0.625368 0.715289 0.647718 0.8027785 0.724011 0.858097 0.509604 0.6946748 0.849666 0.500731 0.563400 0.4241920 0.690202 0.713067 0.4523543 0.6002412 0.6341520 0.5161552 0.621072 0.342742 4 0.644888 0.720359 -0.07336765 6 0.657555 0.701699 -0.04414402 9.9953e-01 9.2378e-04 weaklyHypometh 1.000000 0.1539637 insignificant 0.99938 2.5048e-02 weaklyHypometh 1 0.9633847 insignificant -0.05193747 0.30653318 insignificant 1.00000 insignificant 0.644438 0.6604278 0.0176561 6 0.637596 0.7596167 -0.12202050 3.1183e-01 4.7997e-03 inconclusive 1.0000e+00 2.6665e-01 insignificant 6.9610e-01 3.3046e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.6487e-05 9.9941e-01 insignificant 1.0000e+00 insignificant 0.645064 0.5749526 0.0991533 6 0.689977 0.754695 -0.06471790 6.1999e-02 8.5740e-01 insignificant 8.3782e-01 1.0000e+00 insignificant 4.1193e-02 9.8805e-01 weaklyHypermeth 7.3558e-01 1.00000000 insignificant 0.04524405 3.1626e-01 insignificant 1.00000000 insignificant 0.719431 0.6604278 0.0811254 6 0.671869 0.7596167 -0.0877478 1.0407e-01 1.0269e-01 insignificant 7.0317e-01 1.0000e+00 insignificant 7.9489e-02 4.1979e-01 insignificant 6.4258e-01 1.000000 insignificant 0.0519110 2.9614e-01 insignificant 1.0000e+00 insignificant 0.720512 0.5745489 0.1697468 6 0.690965 0.727439 -0.0364735 3.1052e-04 9.8791e-01 weaklyHypermeth 9.1329e-03 1.0000e+00 weaklyHypermeth 1.3346e-04 9.9705e-01 weaklyHypermeth 6.6732e-03 1.000000 weaklyHypermeth 0.0971815 9.2313e-02 insignificant 1.0000000 insignificant 0.6601073 0.5737393 0.0975383 6 0.7620209 0.693369 0.0686521 2.1349e-04 9.7428e-01 weaklyHypermeth 1.7790e-02 1.0000e+00 weaklyHypermeth 1.9979e-02 9.8581e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0452705 3.0526e-01 insignificant 1.0000e+00 insignificant chr22 18246089 18247089 155213 GNB1L ENSG00000185838 0.9360731 235 7 0.8761741 231 12 0.694780 279 11 0.9648439 256 10 0.9133417 151 10 0.922037 204 10 0.949348 243 12 0.918296 197 11 0.887820 186 12 0.947728 154 11 0.9261277 241 12 0.820239 182 11 0.8971357 245 12 NA 0 0 0.838959 201 11 0.818628 121 6 0.765398 153 10 0.5151728 296 7 0.8759543 124 9 0.892100 209 11 0.8332112 111 10 0.7350741 124 6 0.799131 207 8 0.676984 59 6 0.900577 63 5 0.899422 187 12 0.843048 96 7 0.9394841 95 9 0.869339 88 10 0.926233 191 11 0.9134285 189 11 0.931984 300 8 0.2781120 222 12 0.666867 180 11 0.7686966 557 10 0.012044 80 5 0.8616434 123 10 0.0526182 280 11 0.8233890 220 10 0.8779741 256 11 0.9225397 264 6 0.920602 309 7 0.891474 277 6 0.8919891 0.905201 0.756919 0.9378969 0.8762248 0.926278 0.984326 0.907581 0.885969 0.939867 0.9131283 0.823590 0.891142 NA 0.866476 0.836209 0.8482086 0.6750606 0.8648679 0.8906015 0.9469892 0.8085842 0.838678 0.797093 0.813643 0.899738 0.8442204 0.957449 0.861885 0.911484 0.8840215 0.927714 0.299850 0.698340 0.6839302 0.024387 0.847136 0.0425688 0.8661056 0.8858421 0.9112829 0.917147 0.890971 6 0.869243 0.881287 -0.01522619 9 0.860636 0.874524 -0.01388845 9.4667e-01 1.7820e-01 insignificant 1.000000 1.0000000 insignificant 0.68603 6.4192e-01 insignificant 1 1.0000000 insignificant 0.00540120 0.87647762 insignificant 1.00000 insignificant 0.869243 0.4771151 0.3820008 11 0.860636 0.4626316 0.39800427 1.9311e-34 1.0000e+00 hypermethylated 1.9311e-32 1.0000e+00 hypermethylated 1.3339e-13 1.0000e+00 hypermethylated 2.2231e-11 1.00000000 hypermethylated 4.2106e-01 3.9226e-02 weaklyHypermeth 4.7845e-01 insignificant 0.869243 0.8898944 -0.0183274 6 0.860636 0.868811 -0.00817518 8.1805e-01 3.9336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1578e-01 4.5481e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02613479 4.0473e-01 insignificant 1.00000000 insignificant 0.881287 0.4771151 0.4001345 9 0.874524 0.4626316 0.4118927 8.6498e-24 1.0000e+00 hypermethylated 5.0881e-22 1.0000e+00 hypermethylated 5.1954e-12 1.0000e+00 hypermethylated 6.4942e-10 1.000000 hypermethylated 0.4156630 4.0982e-02 weaklyHypermeth 4.5680e-01 insignificant 0.881287 0.8898944 -0.0030270 6 0.874524 0.868811 0.0057133 5.8692e-01 6.8591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4656e-01 3.0211e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0315360 3.1054e-01 insignificant 1.0000000 insignificant 0.4771151 0.8898944 -0.4057339 6 0.4626316 0.868811 -0.4061794 1.0000e+00 2.5437e-11 hypomethylated 1.0000e+00 1.4132e-09 hypomethylated 1.0000e+00 2.2181e-08 hypomethylated 1.0000e+00 3.1687e-06 hypomethylated -0.4471990 3.2165e-02 weaklyHypometh 4.8572e-01 insignificant chr22 18272123 18273123 155214 ENSG00000217984 0.8692108 227 8 0.8708222 190 7 0.612099 99 7 0.9090039 245 8 0.9045954 54 6 0.816843 349 7 0.863057 65 5 0.849500 101 6 0.903247 97 6 0.853896 67 6 0.8772447 181 7 0.569388 34 5 0.8427709 150 6 0.767857 34 2 0.908163 58 6 0.666667 8 0 0.583333 18 0 0.8672573 285 7 0.9571429 67 6 0.863045 209 7 0.8177083 61 6 0.7183244 115 5 0.850348 89 6 0.696624 78 7 0.975406 61 5 0.854080 256 7 0.661905 92 6 0.8775510 36 5 0.908137 101 6 0.861957 259 6 0.9081868 213 7 0.939868 348 7 0.8533151 172 7 0.941270 65 6 0.7564626 70 5 0.638889 9 0 0.8322968 119 7 0.7008411 183 6 0.6921462 239 6 0.8291939 265 9 0.6929516 254 8 0.707604 210 7 0.918053 331 9 0.8930601 0.859011 0.590529 0.9374272 0.9129477 0.908732 0.865422 0.864017 0.905207 0.908815 0.8588907 0.610649 0.873350 0.859472 0.975325 0.763636 0.6985133 0.7809707 0.9445455 0.7976469 0.9160354 0.7341240 0.841053 0.754411 0.967999 0.843011 0.8045887 0.848052 0.877377 0.860585 0.8758934 0.900190 0.845591 0.964545 0.8354978 0.798369 0.931625 0.8188381 0.9020878 0.8140509 0.7975019 0.677206 0.883860 0 0.859621 0.878806 -0.01599126 7 0.776013 0.828543 -0.05252972 9.9274e-01 4.3063e-01 insignificant 1.000000 1.0000000 insignificant 0.97625 3.4070e-01 insignificant 1 1.0000000 insignificant -0.02141740 0.58250963 insignificant 1.00000 insignificant 0.856968 0.8300971 0.0125639 6 0.741109 0.7615056 -0.02039676 1.7409e-01 7.3762e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3752e-01 6.9082e-02 insignificant 1.0000e+00 1.00000000 insignificant 3.0578e-02 5.7030e-01 insignificant 1.0000e+00 insignificant 0.859961 0.8251156 0.0339656 6 0.853614 0.786810 0.06680420 1.4340e-02 9.3919e-01 weaklyHypermeth 2.4305e-01 1.0000e+00 insignificant 6.0201e-02 9.2801e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.04976738 3.7338e-01 insignificant 1.00000000 insignificant 0.878521 0.8300971 0.0408219 6 0.790441 0.7615056 0.0289353 2.1642e-01 1.1368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0919e-01 7.1709e-02 insignificant 1.0000e+00 1.000000 insignificant 0.0519955 3.5358e-01 insignificant 1.0000e+00 insignificant 0.880869 0.8251156 0.0447609 6 0.911397 0.786810 0.1245869 5.9076e-03 9.7126e-01 weaklyHypermeth 1.2056e-01 1.0000e+00 insignificant 1.7821e-02 9.7954e-01 weaklyHypermeth 4.1445e-01 1.000000 insignificant 0.0711848 2.2425e-01 insignificant 1.0000000 insignificant 0.8327922 0.8330523 -0.0133211 6 0.8566938 0.798245 0.0584493 3.2521e-03 3.7600e-01 inconclusive 1.6260e-01 1.0000e+00 insignificant 7.6915e-03 6.5946e-01 inconclusive 5.4939e-01 1.0000e+00 insignificant 0.0191893 7.7086e-01 insignificant 1.0000e+00 insignificant chr22 18400198 18401198 155215 MIR185 ENSG00000208023 0.9109766 192 5 0.7727419 184 5 0.860963 72 5 0.9574661 146 5 0.8733333 63 5 0.961178 227 5 0.786667 40 5 0.817843 131 5 0.787857 47 5 0.951373 92 5 0.9249784 183 5 0.950000 20 0 0.9330599 144 5 0.960000 66 5 0.927213 159 5 1.000000 39 5 NA 0 0 0.8553130 210 5 0.8576016 252 5 0.912405 298 5 0.9377778 50 4 0.6333333 16 1 0.790609 112 5 1.000000 22 1 0.933333 10 0 0.889312 204 5 0.877778 57 4 0.8333333 21 2 0.947072 296 5 0.902445 151 5 0.9008497 278 5 0.862874 213 5 0.7322727 98 5 0.578010 197 5 1.0000000 91 3 NA 0 0 0.6628372 63 5 0.8994438 217 5 0.9282251 149 5 0.9597902 174 5 0.9014951 99 5 0.933669 225 5 0.927455 154 5 0.9028272 0.749017 0.844984 0.9626015 0.8493976 0.954620 0.751807 0.799457 0.760815 0.945429 0.9174751 0.936747 0.925690 0.951807 0.918587 1.000000 NA 0.8308737 0.8414969 0.9111901 0.9226238 0.5883534 0.785131 1.000000 0.971888 0.885343 0.8764364 0.799197 0.944734 0.893216 0.8898953 0.849811 0.690121 0.527091 0.8419056 NA 0.676348 0.8862746 0.9258462 0.9589477 0.8910101 0.921642 0.917481 0 0.917739 0.923077 0.00087675 5 0.900555 0.887225 0.01333048 2.7924e-01 6.4906e-01 insignificant 1.000000 1.0000000 insignificant 0.66996 3.8178e-01 insignificant 1 1.0000000 insignificant 0.01906135 0.54957610 lowCoverage 1.00000 lowCoverage 0.917739 0.7432432 0.1725610 5 0.900555 0.7699561 0.13059888 1.2699e-05 9.8271e-01 weaklyHypermeth 1.5678e-04 1.0000e+00 weaklyHypermeth 2.9129e-03 9.8628e-01 weaklyHypermeth 4.2837e-02 1.00000000 weaklyHypermeth 1.2028e-01 1.9623e-01 lowCoverage 1.0000e+00 lowCoverage 0.917739 0.9350811 -0.0165959 5 0.900555 0.932571 -0.03201641 9.1406e-01 7.7479e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4162e-01 2.4165e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03533897 6.4106e-02 lowCoverage 0.98624649 lowCoverage 0.923077 0.7432432 0.1871076 5 0.887225 0.7699561 0.1172684 1.2252e-03 8.9828e-01 weaklyHypermeth 1.2252e-02 1.0000e+00 weaklyHypermeth 1.0035e-02 9.6988e-01 weaklyHypermeth 1.2193e-01 1.000000 insignificant 0.1012137 2.7104e-01 lowCoverage 1.0000e+00 lowCoverage 0.923077 0.9350811 -0.0107591 5 0.887225 0.932571 -0.0453469 3.0819e-01 6.1335e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5743e-01 4.7885e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0544003 7.9899e-02 lowCoverage 1.0000000 lowCoverage 0.7432432 0.9350811 -0.1882665 5 0.7699561 0.932571 -0.1626153 9.9911e-01 5.5704e-03 weaklyHypometh 1.0000e+00 7.1415e-02 weaklyHypometh 9.9899e-01 1.3813e-02 weaklyHypometh 1.0000e+00 2.5115e-01 insignificant -0.1556140 1.1410e-01 lowCoverage 1.0000e+00 lowCoverage chr22 18514584 18515584 155216 ZDHHC8 ENSG00000099904 0.9358547 258 7 0.8685267 335 11 0.854693 189 11 0.9785575 290 6 0.9141204 119 10 0.908387 240 8 0.816786 111 9 0.943952 335 11 0.922988 210 11 0.966405 171 11 0.9290051 360 11 0.875140 101 8 0.9350798 347 11 1.000000 4 0 0.901304 161 11 0.565882 59 5 0.928438 62 6 0.9642871 342 6 0.9571383 309 11 0.953085 194 9 0.9731034 149 9 0.9624183 77 6 0.773615 153 11 0.792857 70 9 0.965267 117 6 0.934496 409 11 0.659728 137 9 0.8500000 35 2 0.949154 424 11 0.939679 442 11 0.9668051 411 11 0.756875 279 7 0.8312591 342 11 0.882872 337 11 0.8621761 280 11 0.728777 73 5 0.9642857 105 7 0.7754405 339 9 0.8520457 154 6 0.9623020 343 9 0.7975706 244 6 0.959795 138 6 0.851298 299 9 0.9103881 0.846794 0.804383 0.9682282 0.8736724 0.884754 0.724344 0.948749 0.901089 0.951690 0.9321418 0.796987 0.940111 NA 0.950471 0.802305 0.9006274 0.9386904 0.9500676 0.9796239 0.9622211 0.9706327 0.933867 0.879202 0.948857 0.926615 0.9081031 0.981618 0.917626 0.942881 0.9712161 0.893497 0.832956 0.790480 0.9734379 0.675367 0.947479 0.7845451 0.9424639 0.9532435 0.9291540 0.951248 0.934345 3 0.912566 0.930370 -0.01685624 11 0.926109 0.858316 0.06779303 9.9758e-01 2.4298e-01 insignificant 1.000000 1.0000000 insignificant 0.64480 3.6850e-01 insignificant 1 1.0000000 insignificant 0.02898168 0.44183542 insignificant 1.00000 insignificant 0.912461 0.8394309 0.0713989 11 0.919951 0.8494082 0.07054289 5.5019e-10 7.3052e-01 weaklyHypermeth 9.6524e-09 1.0000e+00 weaklyHypermeth 2.0001e-01 2.3064e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.5180e-02 1.3383e-01 insignificant 1.0000e+00 insignificant 0.912795 0.9379779 -0.0212642 6 0.935961 0.862401 0.07355947 9.1844e-01 3.4044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8801e-01 3.0854e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02137930 5.9588e-01 insignificant 1.00000000 insignificant 0.930715 0.8394309 0.0962018 11 0.929842 0.8494082 0.0804338 3.4819e-10 9.1858e-01 weaklyHypermeth 7.9135e-09 1.0000e+00 weaklyHypermeth 1.0313e-01 4.1218e-01 insignificant 7.9946e-01 1.000000 insignificant 0.0361981 4.4331e-01 insignificant 1.0000e+00 insignificant 0.930370 0.9386189 -0.0041268 6 0.858316 0.918155 -0.0598398 8.7260e-01 6.5566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7445e-01 2.0984e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0076024 8.6868e-01 insignificant 1.0000000 insignificant 0.8394309 0.9385141 -0.1231811 6 0.8494082 0.911335 -0.0619269 9.9606e-01 8.0509e-05 weaklyHypometh 1.0000e+00 1.8298e-03 weaklyHypometh 9.9533e-01 1.6628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0438005 3.7677e-01 insignificant 1.0000e+00 insignificant chr22 18611182 18612182 155221 ZDHHC8 ENSG00000099904 0.6002564 46 3 0.5752657 189 5 0.610330 260 5 0.5858586 32 2 0.5751453 166 5 0.699201 65 5 0.480328 242 5 0.634830 140 5 0.500408 169 5 0.697252 116 4 0.7190592 171 5 0.489868 137 4 0.4722373 187 4 0.666667 3 0 0.516709 160 4 0.798615 171 4 0.391429 161 4 0.8000000 12 0 0.5893301 169 4 0.569270 56 5 0.8764760 76 4 1.0000000 4 0 0.714864 87 5 0.752775 61 5 0.519231 15 1 0.483022 184 5 0.481364 36 4 0.5811404 63 4 0.616878 167 4 0.442812 191 5 0.5624912 207 5 0.766387 105 5 0.5205195 176 5 0.718035 114 5 0.7456140 63 3 0.314167 32 2 0.6499761 89 5 0.7745145 170 5 0.7220168 35 3 0.8629446 94 5 0.5823529 27 1 0.722222 7 0 0.509402 47 2 0.3823077 0.540023 0.565031 0.5921029 0.4953611 0.629870 0.462511 0.517939 0.442398 0.586782 0.7197901 0.581707 0.263528 NA 0.566570 0.776320 0.3081238 0.6333333 0.4594278 0.5567599 0.7704303 0.9657140 0.732745 0.771342 0.589332 0.410951 0.3559091 0.532456 0.641917 0.389439 0.5147437 0.674790 0.587042 0.631435 0.8321637 0.440556 0.652166 0.9196631 0.7085714 0.9007692 0.5111111 0.641111 0.595000 0 0.557315 0.589121 -0.02152282 5 0.595071 0.608749 -0.01367873 8.0323e-01 2.6132e-01 insignificant 1.000000 1.0000000 insignificant 0.82444 1.9319e-01 insignificant 1 1.0000000 insignificant -0.05118370 0.37176239 lowCoverage 1.00000 lowCoverage 0.557315 0.6583851 -0.1078145 5 0.595071 0.6358799 -0.04080919 1.4754e-01 2.8969e-03 weaklyHypometh 9.9686e-01 1.8105e-01 insignificant 3.4264e-01 4.7163e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -2.1868e-02 7.8172e-01 lowCoverage 1.0000e+00 lowCoverage 0.557315 0.6363636 -0.1161486 3 0.595071 0.755744 -0.16067341 8.2239e-01 2.2164e-06 lowCoverage 1.0000e+00 1.1082e-03 lowCoverage 9.0255e-01 2.7565e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.08118473 2.7111e-01 lowCoverage 1.00000000 lowCoverage 0.589121 0.6583851 -0.0771013 5 0.608749 0.6358799 -0.0271305 2.4226e-01 3.7632e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.9566e-01 3.8459e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0293157 7.4416e-01 lowCoverage 1.0000e+00 lowCoverage 0.589465 0.6380952 -0.1155334 3 0.673958 0.796453 -0.1224956 9.9756e-01 1.1094e-03 lowCoverage 1.0000e+00 2.9302e-01 lowCoverage 9.8577e-01 3.5357e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0300010 7.1366e-01 lowCoverage 1.0000000 lowCoverage 0.6583851 0.6363636 -0.0616930 3 0.6358799 0.755744 -0.1198642 8.2014e-01 6.7899e-02 lowCoverage 1.0000e+00 5.6583e-01 lowCoverage 5.1692e-01 4.0066e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0593167 5.4521e-01 lowCoverage 1.0000e+00 lowCoverage chr22 18673530 18674530 155223 ENSG00000161132 0.8717893 296 10 0.7892123 288 10 0.830793 271 10 0.8540801 249 9 0.8450074 126 8 0.828968 473 9 0.854922 230 10 0.812081 304 9 0.869583 320 10 0.755502 305 8 0.7938574 384 10 0.677392 202 8 0.8747817 334 10 0.912762 220 9 0.903100 308 10 0.802381 128 4 0.705467 134 7 0.8476513 406 9 0.9043703 405 10 0.917779 340 9 0.9038696 181 10 0.8282135 205 9 0.898032 262 10 0.887498 169 10 0.878046 206 9 0.880839 379 10 0.737595 252 10 0.8149441 193 8 0.761385 294 10 0.858230 344 10 0.9021782 366 10 0.909064 361 9 0.5746007 234 10 0.503385 235 10 0.6927998 218 4 0.658214 70 4 0.5069857 316 10 0.6398192 423 10 0.8499862 242 9 0.8991515 271 9 0.8609499 252 9 0.868721 343 9 0.835550 311 9 0.8632354 0.753791 0.838630 0.8370989 0.9072124 0.864784 0.870943 0.834842 0.814675 0.884307 0.8256854 0.763002 0.805462 0.894675 0.866006 0.928507 0.8181745 0.7971199 0.8924195 0.8660971 0.9014073 0.7652823 0.868061 0.879203 0.843093 0.862476 0.8301755 0.863878 0.825551 0.821841 0.8488090 0.918575 0.438160 0.431472 0.4318688 0.516466 0.409280 0.5490240 0.7876470 0.8609002 0.8454534 0.825448 0.807350 7 0.845186 0.855140 -0.00997178 10 0.807484 0.845684 -0.03819967 9.0729e-01 6.9724e-02 insignificant 1.000000 1.0000000 insignificant 0.96960 3.4277e-01 insignificant 1 1.0000000 insignificant -0.02241716 0.32028439 insignificant 1.00000 insignificant 0.845159 0.5541444 0.3163611 10 0.792676 0.5735041 0.21917147 1.6136e-33 9.9999e-01 hypermethylated 1.3447e-31 1.0000e+00 hypermethylated 4.5357e-09 1.0000e+00 hypermethylated 2.3872e-07 1.00000000 hypermethylated 2.3661e-01 2.8344e-04 hypermethylated 1.2324e-02 hypermethylated 0.846073 0.8139535 0.0223829 9 0.856669 0.859938 -0.00326895 3.4457e-01 2.3618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3892e-01 1.8447e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03029774 1.0964e-01 insignificant 1.00000000 insignificant 0.855362 0.5541444 0.3214375 10 0.872275 0.5735041 0.2987711 1.3219e-25 1.0000e+00 hypermethylated 9.4419e-24 1.0000e+00 hypermethylated 1.0871e-09 1.0000e+00 hypermethylated 6.7944e-08 1.000000 hypermethylated 0.2590237 1.2930e-04 hypermethylated 5.6217e-03 hypermethylated 0.855403 0.8139535 0.0332852 9 0.867291 0.859938 0.0073534 8.5892e-03 5.7620e-01 weaklyHypermeth 1.6206e-01 1.0000e+00 insignificant 5.9265e-02 5.4153e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0078806 6.9551e-01 insignificant 1.0000000 insignificant 0.5542895 0.8139535 -0.3146556 9 0.5955553 0.859938 -0.2643823 1.0000e+00 1.3645e-12 hypomethylated 1.0000e+00 9.7465e-11 hypomethylated 1.0000e+00 2.5956e-07 hypomethylated 1.0000e+00 2.3596e-05 hypomethylated -0.2669043 2.3555e-04 hypomethylated 1.1455e-02 hypomethylated chr22 18673784 18674784 155224 ENSG00000161132 0.8717893 296 10 0.7892123 288 10 0.830793 271 10 0.8540801 249 9 0.8450074 126 8 0.828968 473 9 0.854922 230 10 0.812081 304 9 0.869583 320 10 0.755502 305 8 0.7938574 384 10 0.677392 202 8 0.8747817 334 10 0.912762 220 9 0.903100 308 10 0.802381 128 4 0.705467 134 7 0.8476513 406 9 0.9043703 405 10 0.917779 340 9 0.9038696 181 10 0.8282135 205 9 0.898032 262 10 0.887498 169 10 0.878046 206 9 0.880839 379 10 0.737595 252 10 0.8149441 193 8 0.761385 294 10 0.858230 344 10 0.9021782 366 10 0.909064 361 9 0.5746007 234 10 0.503385 235 10 0.6927998 218 4 0.658214 70 4 0.5069857 316 10 0.6398192 423 10 0.8499862 242 9 0.8991515 271 9 0.8609499 252 9 0.868721 343 9 0.835550 311 9 0.8632354 0.753791 0.838630 0.8370989 0.9072124 0.864784 0.870943 0.834842 0.814675 0.884307 0.8256854 0.763002 0.805462 0.894675 0.866006 0.928507 0.8181745 0.7971199 0.8924195 0.8660971 0.9014073 0.7652823 0.868061 0.879203 0.843093 0.862476 0.8301755 0.863878 0.825551 0.821841 0.8488090 0.918575 0.438160 0.431472 0.4318688 0.516466 0.409280 0.5490240 0.7876470 0.8609002 0.8454534 0.825448 0.807350 7 0.845186 0.855140 -0.00997178 10 0.807484 0.845684 -0.03819967 9.0729e-01 6.9724e-02 insignificant 1.000000 1.0000000 insignificant 0.96960 3.4277e-01 insignificant 1 1.0000000 insignificant -0.02241716 0.32028439 insignificant 1.00000 insignificant 0.845159 0.5541444 0.3163611 10 0.792676 0.5735041 0.21917147 1.6136e-33 9.9999e-01 hypermethylated 1.3447e-31 1.0000e+00 hypermethylated 4.5357e-09 1.0000e+00 hypermethylated 2.3872e-07 1.00000000 hypermethylated 2.3661e-01 2.8344e-04 hypermethylated 1.2324e-02 hypermethylated 0.846073 0.8139535 0.0223829 9 0.856669 0.859938 -0.00326895 3.4457e-01 2.3618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3892e-01 1.8447e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03029774 1.0964e-01 insignificant 1.00000000 insignificant 0.855362 0.5541444 0.3214375 10 0.872275 0.5735041 0.2987711 1.3219e-25 1.0000e+00 hypermethylated 9.4419e-24 1.0000e+00 hypermethylated 1.0871e-09 1.0000e+00 hypermethylated 6.7944e-08 1.000000 hypermethylated 0.2590237 1.2930e-04 hypermethylated 5.6217e-03 hypermethylated 0.855403 0.8139535 0.0332852 9 0.867291 0.859938 0.0073534 8.5892e-03 5.7620e-01 weaklyHypermeth 1.6206e-01 1.0000e+00 insignificant 5.9265e-02 5.4153e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0078806 6.9551e-01 insignificant 1.0000000 insignificant 0.5542895 0.8139535 -0.3146556 9 0.5955553 0.859938 -0.2643823 1.0000e+00 1.3645e-12 hypomethylated 1.0000e+00 9.7465e-11 hypomethylated 1.0000e+00 2.5956e-07 hypomethylated 1.0000e+00 2.3596e-05 hypomethylated -0.2669043 2.3555e-04 hypomethylated 1.1455e-02 hypomethylated chr22 18782305 18783305 155227 PI4KAP1 ENSG00000215513 0.4273810 28 2 0.2324375 116 8 0.542209 111 9 0.4724989 71 6 0.2778144 130 9 0.437800 162 10 0.566747 102 9 0.245774 112 8 0.361677 156 9 0.369076 170 9 0.4512621 112 7 0.639933 116 8 0.2111647 102 7 0.474167 68 8 0.294275 114 7 0.319136 50 7 0.191667 26 2 0.4826923 45 1 0.3537879 72 6 0.281432 92 7 0.4738462 80 8 0.2432994 92 9 0.336192 98 8 0.277917 75 8 0.546667 45 3 0.471102 76 4 0.294618 240 10 0.3203828 173 10 0.404717 101 5 0.291787 129 9 0.3151245 90 9 0.609199 86 8 0.5299078 107 8 0.529762 49 5 0.5170940 140 6 0.270833 40 3 0.5413556 85 8 0.1842593 81 7 0.4259259 42 2 0.3416226 71 4 0.1388889 44 1 0.166667 37 1 0.350000 34 1 0.3834904 0.174626 0.512098 0.4177356 0.1677572 0.404103 0.547195 0.208984 0.318766 0.324144 0.4738496 0.491924 0.206823 0.430116 0.247539 0.281683 0.1357018 0.3928837 0.3981335 0.2308440 0.3970829 0.2006667 0.303748 0.218931 0.517150 0.335836 0.2874551 0.281646 0.225240 0.187551 0.2590356 0.602997 0.370348 0.392598 0.3807135 0.273503 0.638322 0.0935990 0.2487923 0.2648723 0.0905797 0.030193 0.272947 1 0.365729 0.330739 0.02964794 8 0.352745 0.320179 0.03256555 2.0037e-01 9.5113e-01 insignificant 1.000000 1.0000000 insignificant 0.58182 6.7069e-01 insignificant 1 1.0000000 insignificant -0.00042428 0.99240889 insignificant 1.00000 insignificant 0.365729 0.4163347 -0.0582726 6 0.352745 0.4178468 -0.06510220 9.3786e-01 4.6033e-03 weaklyHypometh 1.0000e+00 2.6665e-01 insignificant 8.1370e-01 1.0608e-01 insignificant 1.0000e+00 1.00000000 insignificant -4.7222e-02 5.2503e-01 insignificant 1.0000e+00 insignificant 0.365916 0.1798246 0.1273123 1 0.388019 0.318340 0.06967940 6.5169e-03 9.7934e-01 lowCoverage 1.2296e-01 1.0000e+00 lowCoverage 3.4470e-03 9.9751e-01 lowCoverage 9.0712e-02 1.00000000 lowCoverage 0.09702579 1.7099e-01 lowCoverage 1.00000000 lowCoverage 0.330739 0.4163347 -0.0859497 6 0.320179 0.4178468 -0.0976677 9.9557e-01 7.3486e-03 weaklyHypometh 1.0000e+00 5.2490e-01 insignificant 9.5504e-01 2.0570e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0467978 5.4007e-01 insignificant 1.0000e+00 insignificant 0.330997 0.1798246 0.0947812 1 0.352197 0.318340 0.0338573 3.1874e-02 8.8792e-01 lowCoverage 4.3662e-01 1.0000e+00 lowCoverage 3.7858e-03 9.8978e-01 lowCoverage 1.0817e-01 1.000000 lowCoverage 0.0974501 1.7930e-01 lowCoverage 1.0000000 lowCoverage 0.4171657 0.1798246 0.1426814 1 0.4596315 0.318340 0.1412918 1.7715e-02 9.9748e-01 lowCoverage 7.3814e-01 1.0000e+00 lowCoverage 3.3394e-02 9.9859e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1442478 1.2611e-01 lowCoverage 1.0000e+00 lowCoverage chr22 18940700 18941700 155232 ENSG00000219315 0.9630893 388 7 0.8863193 342 8 0.923255 221 7 0.9629776 204 7 0.9900078 147 7 0.976335 314 7 0.963719 363 8 0.890255 208 7 0.940837 133 7 0.971871 171 7 0.9620464 333 7 0.900038 174 7 0.9753588 196 7 0.000000 1 0 0.908021 187 7 0.883673 74 7 0.950340 87 7 0.9230903 148 7 0.9350649 136 7 0.924220 303 7 0.9283685 100 7 0.9446581 83 7 0.971964 270 7 0.982759 124 7 0.933333 48 3 0.969829 220 7 0.894532 163 7 0.9790441 131 7 0.971832 347 7 0.971204 366 7 0.9363366 344 7 0.954558 481 8 0.7108966 357 7 0.500276 260 7 0.7935764 101 6 0.790664 186 7 0.4658685 113 7 0.7003016 358 7 0.9646925 302 7 0.9611848 570 7 0.9514069 126 7 0.965697 184 7 0.958051 149 7 0.9556752 0.916888 0.920536 0.9597996 0.9879544 0.971285 0.958001 0.882813 0.939892 0.965984 0.9560922 0.905179 0.970344 NA 0.914506 0.887122 0.9497367 0.9228507 0.9323862 0.9246556 0.9162478 0.9373151 0.972886 0.971485 0.922196 0.969183 0.8943938 0.968828 0.970999 0.966480 0.9325814 0.944572 0.697960 0.484069 0.7326055 0.778016 0.529083 0.6976701 0.9611116 0.9609561 0.9516536 0.956266 0.956794 7 0.941404 0.952185 -0.00839560 7 0.946116 0.962686 -0.01657031 9.9202e-01 5.8128e-02 insignificant 1.000000 1.0000000 insignificant 0.99388 4.6619e-02 weaklyHypometh 1 1.0000000 insignificant -0.06167570 0.21438656 insignificant 1.00000 insignificant 0.941390 0.6378182 0.3054054 7 0.939380 0.6579305 0.28144959 5.8774e-35 1.0000e+00 hypermethylated 6.5305e-33 1.0000e+00 hypermethylated 2.0114e-12 1.0000e+00 hypermethylated 1.8286e-10 1.00000000 hypermethylated 2.3126e-01 9.3712e-03 weaklyHypermeth 1.6441e-01 insignificant 0.941520 0.9564237 -0.0166845 7 0.942149 0.961361 -0.01921205 9.8413e-01 2.6902e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7978e-01 7.2488e-03 weaklyHypometh 1.0000e+00 0.72488391 insignificant -0.06868050 1.6488e-01 insignificant 1.00000000 insignificant 0.952167 0.6378182 0.2913858 7 0.958022 0.6579305 0.3000912 7.1914e-27 1.0000e+00 hypermethylated 6.5376e-25 1.0000e+00 hypermethylated 5.7277e-14 1.0000e+00 hypermethylated 1.9092e-11 1.000000 hypermethylated 0.2929378 3.8266e-03 weaklyHypermeth 8.3187e-02 weaklyHypermeth 0.951807 0.9564237 -0.0090096 7 0.952025 0.961361 -0.0093359 8.9419e-01 3.3888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7046e-01 2.2706e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0070048 3.9922e-01 insignificant 1.0000000 insignificant 0.6379562 0.9564237 -0.3251040 7 0.6662063 0.961361 -0.2951544 1.0000e+00 7.2332e-13 hypomethylated 1.0000e+00 6.0277e-11 hypomethylated 1.0000e+00 2.0771e-08 hypomethylated 1.0000e+00 3.1687e-06 hypomethylated -0.2999426 3.6331e-03 weaklyHypometh 1.0092e-01 insignificant chr22 19271658 19272658 155240 MED15 ENSG00000099917 0.8889396 127 7 0.7977273 118 7 0.858420 128 6 0.9741139 107 5 0.9309524 65 6 0.928110 182 7 0.876190 25 3 0.914315 105 5 0.865344 87 6 0.903571 114 6 0.8431570 193 6 0.752381 27 3 0.8550662 164 6 0.953502 77 4 0.935335 131 6 0.679167 20 2 0.791667 17 2 0.9598593 128 5 0.8696992 198 7 0.854694 115 7 0.8374150 80 7 0.9578373 74 5 0.859298 86 6 0.878035 110 7 0.964502 51 4 0.940590 127 6 0.801569 132 7 0.8643321 69 7 0.878205 97 6 0.914050 115 7 0.9243661 122 6 0.900310 137 7 0.8271748 104 6 0.878472 107 6 0.6500000 94 3 0.809524 19 1 0.8442744 92 7 0.8811215 137 6 0.9235348 72 4 0.9691558 111 6 0.9078195 101 4 0.948485 58 4 0.977161 64 4 0.9304641 0.702589 0.857349 0.9728029 0.9260929 0.903763 0.911202 0.874073 0.898178 0.936475 0.8029104 0.868852 0.928267 0.930349 0.915099 0.707274 0.8124650 0.9310910 0.8929817 0.8742350 0.8262100 0.9206169 0.889185 0.877042 0.943070 0.927557 0.7715226 0.889531 0.884007 0.937030 0.9106078 0.860508 0.830655 0.801571 0.6562155 0.918033 0.852475 0.7935936 0.9062106 0.9578055 0.9230371 0.929396 0.953569 2 0.898496 0.884167 0.00496364 6 0.882559 0.883970 -0.00141117 2.9305e-01 4.0219e-01 insignificant 1.000000 1.0000000 insignificant 0.49356 4.0847e-01 insignificant 1 1.0000000 insignificant -0.02176510 0.32686237 insignificant 1.00000 insignificant 0.898496 0.8390597 0.0552653 6 0.882559 0.8365071 0.04605219 3.5464e-03 1.6768e-01 weaklyHypermeth 3.1949e-02 1.0000e+00 weaklyHypermeth 3.2716e-01 1.4306e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.6516e-02 1.8501e-01 lowCoverage 1.0000e+00 lowCoverage 0.898496 0.9433498 -0.0494750 5 0.882559 0.954192 -0.07163245 9.9990e-01 2.2396e-03 weaklyHypometh 1.0000e+00 3.1994e-01 insignificant 9.9964e-01 6.4644e-03 weaklyHypometh 1.0000e+00 0.71827148 insignificant -0.07362052 2.7573e-03 lowCoverage 0.18381736 lowCoverage 0.884167 0.8390597 0.0671399 7 0.883970 0.8365071 0.0474634 1.3452e-02 2.8204e-01 weaklyHypermeth 1.1117e-01 1.0000e+00 insignificant 2.9098e-01 2.8192e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0782813 7.8517e-02 lowCoverage 7.3380e-01 lowCoverage 0.884167 0.9433498 -0.0637027 5 0.883970 0.954192 -0.0702213 9.9937e-01 1.9159e-03 weaklyHypometh 1.0000e+00 3.1931e-01 insignificant 9.9975e-01 3.4583e-03 weaklyHypometh 1.0000e+00 0.696372 insignificant -0.0518554 1.9746e-02 lowCoverage 0.7313376 lowCoverage 0.8390597 0.9433498 -0.1228705 5 0.8365071 0.954192 -0.1176846 9.8978e-01 9.5414e-04 weaklyHypometh 1.0000e+00 1.8709e-02 weaklyHypometh 9.7673e-01 2.8939e-02 weaklyHypometh 1.0000e+00 4.1240e-01 insignificant -0.1301367 1.1910e-02 lowCoverage 2.4139e-01 lowCoverage chr22 19294457 19295457 155242 ENSG00000220624 0.8765419 253 5 0.8218597 204 6 0.802478 181 6 0.8542384 246 5 0.8961431 90 6 0.917716 328 5 0.870246 134 6 0.891829 170 6 0.846158 158 6 0.895259 141 6 0.9036512 204 6 0.778086 116 5 0.8092266 206 6 NA 0 0 0.823937 155 6 0.819048 65 6 0.797453 77 6 0.7634855 220 5 0.8990032 119 5 0.869772 254 6 0.8298611 89 6 0.8083364 101 6 0.726819 224 5 0.918871 93 6 0.913937 70 5 0.860022 292 6 0.764554 114 5 0.8608881 81 6 0.891752 171 5 0.882010 295 5 0.9078741 258 6 0.889607 380 6 0.6499700 215 6 0.439412 154 6 0.4515152 154 6 0.513268 82 5 0.8003074 66 6 0.5539908 319 6 0.8037299 274 5 0.8201193 334 5 0.7029831 242 5 0.795582 285 5 0.735713 255 5 0.8412019 0.772098 0.819667 0.8860139 0.8720257 0.891595 0.825804 0.867184 0.840620 0.881645 0.8694833 0.747547 0.785175 NA 0.821423 0.752373 0.7210642 0.7739475 0.8906479 0.8621412 0.8930328 0.8088344 0.862385 0.914948 0.899588 0.871074 0.7259952 0.856466 0.855743 0.907077 0.8931897 0.871585 0.643469 0.540741 0.3424143 0.604877 0.795676 0.5200330 0.8281996 0.8025237 0.8554091 0.783447 0.757437 5 0.840108 0.868081 -0.03001435 6 0.854338 0.870731 -0.01639315 9.4469e-01 3.5538e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.79035 1.6532e-02 weaklyHypometh 1 0.7540382 insignificant -0.00527438 0.80097864 insignificant 1.00000 insignificant 0.840108 0.5565657 0.2891550 6 0.854338 0.5610780 0.29325995 2.3340e-22 1.0000e+00 hypermethylated 1.1670e-20 1.0000e+00 hypermethylated 5.2802e-07 1.0000e+00 hypermethylated 1.7033e-05 1.00000000 hypermethylated 2.8119e-01 3.5701e-03 weaklyHypermeth 7.2860e-02 weaklyHypermeth 0.840108 0.7812950 0.0379838 5 0.854338 0.779627 0.07471136 8.6970e-05 7.4495e-01 weaklyHypermeth 2.8055e-03 1.0000e+00 weaklyHypermeth 1.0360e-03 6.0177e-01 weaklyHypermeth 3.5723e-02 1.00000000 weaklyHypermeth 0.07764457 2.0218e-02 weaklyHypermeth 0.50661230 insignificant 0.868081 0.5565657 0.3117065 6 0.870731 0.5610780 0.3096531 1.4853e-17 1.0000e+00 hypermethylated 5.5011e-16 1.0000e+00 hypermethylated 6.4796e-07 1.0000e+00 hypermethylated 2.0902e-05 1.000000 hypermethylated 0.2864673 2.7417e-03 weaklyHypermeth 6.3668e-02 weaklyHypermeth 0.868081 0.7812950 0.0711910 5 0.870731 0.779627 0.0911045 2.8151e-07 9.3864e-01 weaklyHypermeth 1.6559e-05 1.0000e+00 weaklyHypermeth 1.7717e-04 8.0934e-01 weaklyHypermeth 8.0530e-03 1.000000 weaklyHypermeth 0.0829189 1.6697e-02 weaklyHypermeth 0.6956910 insignificant 0.5565657 0.7812950 -0.2628050 5 0.5610780 0.779627 -0.2185486 9.9957e-01 1.6363e-06 hypomethylated 1.0000e+00 5.2782e-05 hypomethylated 9.9999e-01 4.7633e-04 hypomethylated 1.0000e+00 1.4885e-02 hypomethylated -0.2035484 1.3152e-02 weaklyHypometh 2.5293e-01 insignificant chr22 19382641 19383641 155245 ENSG00000217882 0.7283272 139 4 0.7488502 223 6 0.741162 60 6 0.9400000 147 4 0.8658154 61 3 0.888104 171 6 0.872222 34 3 0.909897 113 6 0.797449 43 5 0.910276 54 5 0.8786188 232 6 0.865527 40 3 0.9236453 95 3 1.000000 16 1 0.957174 67 6 0.250000 6 0 0.875000 16 1 0.8113625 105 4 0.8699213 179 6 0.805073 121 5 0.8598639 56 4 0.8333333 10 1 0.764935 97 6 0.448291 29 3 0.881369 217 4 0.809037 230 6 0.709838 72 5 0.7142857 18 0 0.736082 136 6 0.764918 173 6 0.9064103 250 6 0.866794 156 6 0.5039099 139 6 0.488816 174 6 0.6449580 170 5 0.666667 23 1 0.6083153 75 6 0.7734136 242 6 0.7125000 51 4 0.7045752 98 4 0.8746606 108 4 0.722719 121 4 0.837566 99 4 0.8365671 0.802788 0.852154 0.9093750 0.9013777 0.938388 0.871875 0.913688 0.685268 0.944901 0.9051785 0.830208 0.908020 0.996940 0.927637 0.959235 0.9729064 0.8984690 0.8582828 0.9166476 0.9174107 0.9218750 0.993324 0.741787 0.951153 0.902115 0.8895948 0.843750 0.791244 0.930055 0.9257512 0.848857 0.691959 0.763215 0.7985163 0.855604 0.652132 0.8941427 0.8653646 0.8948529 0.8917562 0.788350 0.886781 1 0.857960 0.875087 -0.01650478 6 0.840000 0.764800 0.07520066 3.7734e-01 2.9561e-01 insignificant 1.000000 1.0000000 insignificant 0.15422 4.3463e-01 insignificant 1 1.0000000 insignificant 0.05732478 0.25677468 lowCoverage 1.00000 lowCoverage 0.857815 0.6160389 0.1746561 6 0.831852 0.5866069 0.24524551 2.1415e-10 9.5447e-01 weaklyHypermeth 3.8241e-09 1.0000e+00 weaklyHypermeth 7.2644e-05 7.6714e-01 weaklyHypermeth 1.5146e-03 1.00000000 weaklyHypermeth 2.1757e-01 2.0619e-03 lowCoverage 5.1928e-02 lowCoverage 0.857960 0.8113208 0.0522222 4 0.840000 0.727457 0.11254306 2.0465e-04 2.7399e-01 lowCoverage 5.6848e-03 1.0000e+00 lowCoverage 6.6615e-03 4.7500e-01 lowCoverage 1.5187e-01 1.00000000 lowCoverage 0.06151699 2.3775e-01 lowCoverage 1.00000000 lowCoverage 0.876827 0.6160389 0.2400898 6 0.850600 0.5866069 0.2639929 2.6771e-07 9.9839e-01 hypermethylated 4.6156e-06 1.0000e+00 hypermethylated 6.0966e-03 9.9185e-01 weaklyHypermeth 8.1289e-02 1.000000 weaklyHypermeth 0.1602499 1.5046e-02 lowCoverage 2.3883e-01 lowCoverage 0.875087 0.8113208 0.0734074 4 0.764800 0.727457 0.0373424 6.1888e-02 5.0130e-01 lowCoverage 7.3677e-01 1.0000e+00 lowCoverage 3.0961e-01 7.4529e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0041922 9.3484e-01 lowCoverage 1.0000000 lowCoverage 0.6160389 0.8130252 -0.1771982 4 0.5866069 0.848700 -0.2620934 9.9307e-01 1.3741e-03 lowCoverage 1.0000e+00 2.4983e-02 lowCoverage 9.8797e-01 9.2433e-03 lowCoverage 1.0000e+00 1.7776e-01 lowCoverage -0.1560576 2.1786e-02 lowCoverage 3.6925e-01 lowCoverage chr22 19896926 19897926 155255 GGT8P ENSG00000133475 0.9600637 376 7 0.9082001 358 7 0.936613 261 7 0.9774198 218 7 0.9668457 95 7 0.958446 290 7 0.942275 398 8 0.966902 228 7 0.932277 116 7 0.959147 202 7 0.9588583 294 7 0.911370 138 7 0.9597792 176 7 1.000000 2 0 0.984583 175 7 0.880800 76 7 0.958630 105 7 0.9571846 111 7 0.9438066 155 7 0.966746 227 7 0.8927484 76 7 0.9125450 69 7 0.831616 386 7 0.959148 65 6 0.994709 31 1 0.965116 181 7 0.941264 201 7 0.9560658 106 7 0.951261 369 7 0.959416 344 7 0.9605909 379 7 0.957800 415 7 0.7438781 384 7 0.430266 304 7 0.8110119 93 5 0.750964 120 7 0.6633497 133 7 0.7562997 392 7 0.9655313 394 7 0.9587763 455 7 0.9603254 149 7 0.964923 187 7 0.962984 198 7 0.9554888 0.896388 0.923150 0.9734120 0.9555235 0.948458 0.932807 0.963204 0.922758 0.950882 0.9540808 0.917231 0.959361 NA 0.983749 0.879745 0.9580290 0.9520652 0.9265149 0.9576218 0.9092595 0.9090206 0.952456 0.963876 0.989876 0.966736 0.9400991 0.949124 0.941482 0.958493 0.9557756 0.952249 0.686786 0.410615 0.7566554 0.747823 0.561649 0.7063628 0.9653177 0.9616139 0.9567191 0.960339 0.951073 7 0.939265 0.948894 -0.00745576 7 0.959182 0.936020 0.02316151 6.3993e-01 3.8070e-01 insignificant 1.000000 1.0000000 insignificant 0.50063 4.1304e-01 insignificant 1 1.0000000 insignificant 0.01130737 0.42514469 insignificant 1.00000 insignificant 0.939250 0.6353436 0.3157050 7 0.954646 0.7229154 0.23173100 2.9992e-35 1.0000e+00 hypermethylated 3.7490e-33 1.0000e+00 hypermethylated 4.4960e-11 1.0000e+00 hypermethylated 3.4585e-09 1.00000000 hypermethylated 2.5887e-01 5.4909e-03 weaklyHypermeth 1.0360e-01 insignificant 0.939220 0.9573391 -0.0203556 7 0.948977 0.966284 -0.01730699 9.9989e-01 5.6634e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9840e-01 2.0027e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01101074 9.5349e-02 insignificant 1.00000000 insignificant 0.948874 0.6353436 0.2992266 7 0.928911 0.7229154 0.2059960 2.9966e-24 9.9912e-01 hypermethylated 1.8729e-22 1.0000e+00 hypermethylated 3.5043e-10 9.9906e-01 hypermethylated 2.6956e-08 1.000000 hypermethylated 0.2475617 6.0818e-03 weaklyHypermeth 1.2164e-01 insignificant 0.948855 0.9573391 -0.0131175 7 0.920025 0.966284 -0.0462589 9.9223e-01 1.4352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6107e-01 3.5523e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0223181 9.9896e-02 insignificant 1.0000000 insignificant 0.6350877 0.9573391 -0.3353724 7 0.6882798 0.966284 -0.2780044 1.0000e+00 4.2275e-12 hypomethylated 1.0000e+00 2.6422e-10 hypomethylated 1.0000e+00 7.4164e-07 hypomethylated 1.0000e+00 5.7050e-05 hypomethylated -0.2698798 4.7619e-03 weaklyHypometh 1.2870e-01 insignificant chr22 19976047 19977047 155269 ENSG00000169662 0.9579146 315 8 0.7980895 258 8 0.867196 227 8 0.9173650 330 10 0.9315018 194 8 0.886976 387 10 0.860384 255 8 0.855811 275 8 0.876794 203 8 0.935956 189 8 0.8245579 246 8 0.919444 111 8 0.9198392 277 8 0.908545 208 8 0.892456 307 8 0.779551 121 8 0.861111 22 2 0.9056721 281 8 0.8932059 160 8 0.942552 231 8 0.8353616 116 8 0.9297755 161 4 0.924059 380 8 0.940497 123 6 0.914668 91 6 0.955863 220 10 0.854317 331 8 0.8170723 241 8 0.924103 398 9 0.931701 363 10 0.9117209 300 10 0.946934 427 10 0.6322980 281 8 0.805556 159 6 0.5544714 133 8 0.789108 217 8 0.7273102 241 8 0.7840037 359 10 0.8983836 316 10 0.9225941 217 6 0.9151180 322 10 0.802473 218 8 0.894606 314 8 0.9179330 0.796866 0.828976 0.9139080 0.9168188 0.912564 0.829567 0.851347 0.850715 0.912263 0.8949380 0.894203 0.929025 0.867174 0.905068 0.764079 0.8521971 0.8320204 0.8181338 0.9129206 0.8690054 0.9276254 0.888246 0.919616 0.887428 0.915993 0.8248451 0.870930 0.900196 0.879189 0.8650613 0.928815 0.610988 0.682917 0.6007584 0.695537 0.704778 0.7256508 0.8944768 0.9284977 0.9099258 0.888019 0.882442 6 0.876441 0.892664 -0.01357440 8 0.892907 0.927155 -0.03424783 9.9010e-01 1.0601e-01 insignificant 1.000000 1.0000000 insignificant 0.99892 2.3545e-01 insignificant 1 1.0000000 insignificant -0.02042653 0.23853877 insignificant 1.00000 insignificant 0.876500 0.6887608 0.1973562 8 0.899951 0.7523688 0.14758219 9.5177e-25 1.0000e+00 weaklyHypermeth 5.2876e-23 1.0000e+00 weaklyHypermeth 7.2745e-10 9.9977e-01 weaklyHypermeth 4.5466e-08 1.00000000 weaklyHypermeth 1.7129e-01 7.8491e-03 weaklyHypermeth 1.4271e-01 insignificant 0.876387 0.8989899 -0.0301170 8 0.883983 0.906345 -0.02236247 8.5266e-01 8.8171e-03 weaklyHypometh 1.0000e+00 7.5661e-01 insignificant 7.2344e-01 4.0634e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 0.00011112 9.9647e-01 insignificant 1.00000000 insignificant 0.892116 0.6889849 0.2130479 8 0.921085 0.7730048 0.1480799 2.1224e-19 1.0000e+00 hypermethylated 1.0106e-17 1.0000e+00 hypermethylated 1.3599e-09 9.9999e-01 hypermethylated 7.9995e-08 1.000000 hypermethylated 0.1917148 4.3971e-03 weaklyHypermeth 9.1607e-02 weaklyHypermeth 0.892664 0.8990627 -0.0084723 8 0.927155 0.913550 0.0136056 5.4040e-01 4.2344e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4556e-01 2.7433e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0205376 4.4407e-01 insignificant 1.0000000 insignificant 0.6887608 0.8988439 -0.2086420 10 0.7523688 0.897831 -0.1454625 9.9911e-01 3.0056e-12 hypomethylated 1.0000e+00 2.0037e-10 hypomethylated 9.9783e-01 1.1592e-06 hypomethylated 1.0000e+00 7.6742e-05 hypomethylated -0.1711772 7.1901e-03 weaklyHypometh 1.5631e-01 insignificant chr22 20126170 20127170 155274 HIC2 ENSG00000169635 0.5420677 92 7 0.3411486 168 12 0.541636 234 12 0.4542735 81 6 0.4014953 231 13 0.570067 183 13 0.584123 286 12 0.394191 178 12 0.490827 201 13 0.515064 241 12 0.5051724 273 11 0.493733 186 11 0.3635291 116 8 0.460000 59 5 0.516091 259 12 0.497063 221 4 0.419567 79 6 0.5247255 76 4 0.3834994 135 8 0.483911 130 12 0.5304663 109 8 0.3027223 73 6 0.525956 157 8 0.389892 123 12 0.554068 65 4 0.480567 119 11 0.439250 235 11 0.4702016 207 12 0.566075 142 8 0.405620 174 12 0.4983046 148 11 0.657676 138 12 0.4496347 159 12 0.605828 171 10 0.6515050 139 8 0.386667 36 2 0.6329762 130 9 0.2303235 180 11 0.4472222 66 3 0.3892045 117 8 0.5148485 45 1 0.338889 35 1 0.482051 96 7 0.4925985 0.266444 0.489857 0.4137016 0.2996173 0.526878 0.591922 0.349220 0.386137 0.458407 0.4266709 0.420127 0.298010 0.434209 0.361254 0.457803 0.3229657 0.4035121 0.3558690 0.4209409 0.4338319 0.2308022 0.423362 0.381445 0.406068 0.352111 0.3544832 0.381582 0.444144 0.301870 0.4177400 0.633170 0.415309 0.510356 0.4604625 0.281843 0.582087 0.1836944 0.3559925 0.2971995 0.4426115 0.303052 0.374264 1 0.592182 0.469231 0.02402769 11 0.491696 0.468288 0.02340801 2.1793e-01 9.5607e-01 insignificant 1.000000 1.0000000 insignificant 0.65431 6.2161e-01 insignificant 1 1.0000000 insignificant -0.01095721 0.72891295 insignificant 1.00000 insignificant 0.592182 0.5447853 0.0058510 10 0.491696 0.4775797 0.01411612 2.1301e-02 1.2834e-01 weaklyHypermeth 1.6772e-01 1.0000e+00 insignificant 4.5171e-01 3.5354e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.8713e-02 7.9884e-01 insignificant 1.0000e+00 insignificant 0.592182 0.3481894 0.0792493 3 0.491696 0.414784 0.07691156 6.5979e-05 9.6428e-01 lowCoverage 2.2447e-03 1.0000e+00 lowCoverage 8.5504e-03 4.7595e-01 lowCoverage 1.8588e-01 1.00000000 lowCoverage 0.03966623 3.0345e-01 lowCoverage 1.00000000 lowCoverage 0.469231 0.5447853 -0.0240934 10 0.468288 0.4775797 -0.0092919 3.6648e-01 1.8585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0037e-01 3.4974e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0077557 9.1894e-01 insignificant 1.0000e+00 insignificant 0.469231 0.3481894 0.0499532 3 0.468288 0.414784 0.0535036 2.3497e-02 9.7279e-01 lowCoverage 3.4054e-01 1.0000e+00 lowCoverage 1.6370e-01 8.1384e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0506234 2.5163e-01 lowCoverage 1.0000000 lowCoverage 0.5447853 0.3481894 0.0621542 3 0.4775797 0.414784 0.0627954 3.5900e-02 8.1518e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.3629e-01 5.4187e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0583792 4.6315e-01 lowCoverage 1.0000e+00 lowCoverage chr22 20176252 20177252 155276 PI4KAP2 ENSG00000183506 0.6085294 43 3 0.2728084 130 9 0.564651 154 10 0.4252588 67 6 0.3251424 155 10 0.441542 151 10 0.630018 107 9 0.135238 116 9 0.241263 108 9 0.399638 172 9 0.4488690 122 9 0.487640 135 7 0.2153968 80 6 0.409834 47 3 0.253183 108 9 0.365833 64 6 0.370370 35 1 0.3354315 54 2 0.3452381 54 4 0.347128 84 7 0.5129221 66 7 0.2453470 120 10 0.303677 124 8 0.310011 67 8 0.473043 52 3 0.294697 65 6 0.356873 238 9 0.3278463 169 10 0.344290 107 6 0.377439 170 10 0.4771089 63 5 0.537897 90 10 0.4467411 112 9 0.416958 61 5 0.5760000 134 7 0.142325 49 4 0.5787879 66 8 0.1556999 110 7 0.2288961 66 4 0.2312281 109 8 0.0925926 50 1 0.356667 38 1 0.381452 54 1 0.5200484 0.198771 0.423632 0.3920316 0.2391346 0.434259 0.596998 0.131555 0.192581 0.333318 0.3575949 0.454304 0.139090 0.389516 0.269736 0.255538 0.2701971 0.2958756 0.2577496 0.3161890 0.4093991 0.2092004 0.281600 0.237951 0.374849 0.211939 0.2976699 0.283822 0.264578 0.280539 0.3282184 0.538339 0.422780 0.337337 0.4149367 0.201736 0.547890 0.1115541 0.2042269 0.2101932 0.1068038 0.254747 0.342538 1 0.361531 0.339353 0.02421849 9 0.386302 0.357955 0.02834786 2.7017e-01 9.5772e-01 insignificant 1.000000 1.0000000 insignificant 0.77982 5.3820e-01 insignificant 1 1.0000000 insignificant 0.00105472 0.97910412 insignificant 1.00000 insignificant 0.361531 0.4369115 -0.0617136 7 0.386302 0.4293420 -0.04303947 6.3951e-01 1.9335e-02 weaklyHypometh 1.0000e+00 9.6675e-01 insignificant 4.3826e-01 1.5517e-01 insignificant 1.0000e+00 1.00000000 insignificant -4.9346e-03 9.5532e-01 insignificant 1.0000e+00 insignificant 0.361531 0.2056962 0.0993453 2 0.386302 0.261510 0.12479256 5.5589e-04 9.9891e-01 lowCoverage 1.2634e-02 1.0000e+00 lowCoverage 1.5906e-03 9.9925e-01 lowCoverage 4.9706e-02 1.00000000 lowCoverage 0.12298366 7.8730e-02 lowCoverage 1.00000000 lowCoverage 0.338843 0.4360902 -0.0962761 7 0.325413 0.3903109 -0.0648976 8.6382e-01 1.7615e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.2281e-01 3.3240e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0059893 9.4560e-01 insignificant 1.0000e+00 insignificant 0.338843 0.2050473 0.0734559 2 0.325413 0.237736 0.0876770 2.3514e-03 9.9848e-01 lowCoverage 5.1118e-02 1.0000e+00 lowCoverage 3.2060e-03 9.9976e-01 lowCoverage 9.4293e-02 1.000000 lowCoverage 0.1219289 8.0634e-02 lowCoverage 1.0000000 lowCoverage 0.4360902 0.2050473 0.1285595 2 0.3903109 0.237736 0.1525746 1.1672e-02 9.8226e-01 lowCoverage 5.0748e-01 1.0000e+00 lowCoverage 6.6143e-02 9.4342e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1279182 2.1416e-01 lowCoverage 1.0000e+00 lowCoverage chr22 21770384 21771384 155298 GNAZ ENSG00000128266 0.9278797 219 7 0.9480392 80 5 0.910833 79 5 0.9248521 111 7 0.6000000 11 0 0.879207 156 5 0.608333 17 1 0.819876 53 5 0.859048 70 5 0.847619 37 5 0.8255717 125 5 0.880000 30 5 0.8730119 104 5 NA 0 0 0.960000 30 5 0.680000 9 1 0.900000 28 4 0.8785714 67 4 0.8953360 112 5 0.909073 137 5 0.9333333 48 5 0.8711111 44 5 0.780137 103 5 0.935897 41 4 0.880000 28 5 0.755495 61 5 0.830000 61 5 0.6600000 25 4 0.855615 61 5 0.925556 54 5 0.9536364 96 5 0.933969 138 5 0.6408333 75 5 0.730753 90 5 NA 0 0 0.838095 44 5 0.7336508 43 5 0.8539487 74 5 0.9236392 77 7 0.9237867 168 7 0.8465006 125 7 0.855038 170 7 0.665883 129 7 0.9110600 0.949883 0.909266 0.8949032 0.6268657 0.853264 0.637438 0.815627 0.871500 0.874911 0.8324417 0.901493 0.875917 NA 0.949254 0.683582 0.8880597 0.8440299 0.8872161 0.9305824 0.9154229 0.8643449 0.897149 0.933601 0.901493 0.771732 0.8395522 0.667164 0.849389 0.925456 0.9574627 0.932529 0.636132 0.736557 NA 0.807392 0.704738 0.8445618 0.8831416 0.8796345 0.7732306 0.793953 0.642365 0 0.882138 0.882895 -0.00215854 5 0.913400 0.773563 0.13983772 9.0608e-01 8.6746e-01 insignificant 1.000000 1.0000000 insignificant 0.72232 6.9212e-01 insignificant 1 1.0000000 insignificant -0.01075971 0.76358212 lowCoverage 1.00000 lowCoverage 0.880741 0.7423313 0.1369671 5 0.878760 0.7486490 0.13011143 8.1218e-06 9.9981e-01 weaklyHypermeth 1.0413e-04 1.0000e+00 weaklyHypermeth 1.5901e-02 9.7884e-01 weaklyHypermeth 1.7866e-01 1.00000000 insignificant 8.9346e-02 9.1133e-02 lowCoverage 8.6596e-01 lowCoverage 0.886024 0.8206278 0.0749553 5 0.926443 0.849167 0.07727630 2.3986e-03 9.9977e-01 weaklyHypermeth 5.1033e-02 1.0000e+00 weaklyHypermeth 4.2139e-02 9.9674e-01 weaklyHypermeth 7.3928e-01 1.00000000 insignificant 0.00583309 9.1584e-01 lowCoverage 1.00000000 lowCoverage 0.883905 0.7423313 0.1409352 5 0.882988 0.7486490 0.1343386 1.8838e-04 9.9864e-01 weaklyHypermeth 2.1407e-03 1.0000e+00 weaklyHypermeth 2.5140e-02 9.8697e-01 weaklyHypermeth 2.5223e-01 1.000000 insignificant 0.1001061 6.6759e-02 lowCoverage 6.4691e-01 lowCoverage 0.882895 0.8136882 0.0728928 5 0.773563 0.828933 -0.0553708 3.8890e-02 7.2279e-01 weaklyHypermeth 5.1172e-01 1.0000e+00 insignificant 6.1112e-02 9.6937e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0165928 7.6746e-01 lowCoverage 1.0000000 lowCoverage 0.7423313 0.8113949 -0.0614808 5 0.7486490 0.807729 -0.0590800 9.7596e-01 1.8184e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5906e-01 4.5058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0835133 2.1163e-01 lowCoverage 1.0000e+00 lowCoverage chr22 22064912 22065912 155302 ENSG00000215478 0.9220459 186 6 0.5578792 231 5 0.830431 167 6 0.7641143 165 6 0.9467593 86 5 0.880818 235 6 0.613302 86 6 0.775363 180 6 0.677419 140 5 0.909476 137 5 0.8574504 220 6 0.800000 25 2 0.7924947 145 5 0.863194 118 5 0.753175 184 5 0.681319 74 4 0.000000 1 0 0.8556892 332 7 0.8790378 278 6 0.891507 116 6 0.6971561 73 6 0.8091372 161 6 0.830349 116 6 0.772898 60 4 0.864784 198 4 0.919450 172 5 0.822363 190 6 0.7327837 71 4 0.767330 282 5 0.819652 105 6 0.9325303 213 6 0.768140 227 6 0.3923282 115 6 0.315069 255 6 0.2064677 155 4 0.730655 62 4 0.2078207 89 5 0.3773759 320 6 0.9253872 168 6 0.7797556 218 6 0.7248187 186 6 0.767395 341 6 0.883308 165 6 0.8146893 0.639029 0.762348 0.8839774 0.8553143 0.906886 0.830893 0.790035 0.838791 0.871475 0.8169170 0.690425 0.882493 0.906038 0.853869 0.853325 NA 0.8284327 0.8474939 0.8289227 0.8079298 0.8372222 0.907830 0.900216 0.912156 0.865904 0.8193095 0.816189 0.878666 0.806163 0.9067317 0.853903 0.388906 0.338476 0.1799173 0.522586 0.286835 0.3136112 0.9104972 0.8333684 0.8511348 0.889115 0.894713 2 0.826960 0.854390 -0.02928780 6 0.611331 0.669612 -0.05828094 9.9737e-01 1.0281e-01 insignificant 1.000000 1.0000000 insignificant 0.99318 4.4093e-01 insignificant 1 1.0000000 insignificant -0.04880736 0.34458555 insignificant 1.00000 insignificant 0.827497 0.3236181 0.5022676 6 0.672464 0.2573995 0.41506485 1.5468e-30 1.0000e+00 hypermethylated 1.1048e-28 1.0000e+00 hypermethylated 6.1792e-08 1.0000e+00 hypermethylated 2.4717e-06 1.00000000 hypermethylated 3.9095e-01 2.1931e-03 weaklyHypermeth 5.3490e-02 weaklyHypermeth 0.827252 0.8625812 -0.0401395 6 0.761981 0.832143 -0.07016285 9.4826e-01 2.7568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0128e-01 3.8100e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05355932 3.8325e-01 insignificant 1.00000000 insignificant 0.854847 0.3236181 0.5240969 6 0.736573 0.2573995 0.4791739 3.3322e-29 1.0000e+00 hypermethylated 3.7024e-27 1.0000e+00 hypermethylated 8.8744e-09 1.0000e+00 hypermethylated 4.6394e-07 1.000000 hypermethylated 0.4397617 1.9908e-03 weaklyHypermeth 4.8556e-02 weaklyHypermeth 0.857374 0.8631678 -0.0100084 6 0.837383 0.894197 -0.0568138 2.3624e-01 4.8327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5136e-01 7.0041e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0047520 9.1506e-01 insignificant 1.0000000 insignificant 0.3245968 0.8631678 -0.5412639 6 0.3217493 0.894197 -0.5724478 1.0000e+00 2.2436e-14 hypomethylated 1.0000e+00 2.8045e-12 hypomethylated 1.0000e+00 2.3731e-05 hypomethylated 1.0000e+00 1.2490e-03 hypomethylated -0.4445137 1.3736e-03 weaklyHypometh 4.5786e-02 weaklyHypometh chr22 22066348 22067348 155303 ENSG00000215478 0.8003656 245 6 0.8425370 181 11 0.893397 208 13 0.9693874 191 5 0.7918390 151 9 0.910695 247 7 0.898076 184 8 0.949334 200 11 0.859878 134 10 0.892396 194 11 0.9471512 331 11 0.875408 98 9 0.8989277 208 13 0.960000 39 5 0.801047 218 9 0.704941 81 4 0.901166 63 5 0.7978811 387 6 0.9497505 259 11 0.873517 211 7 0.9044508 120 9 0.9718298 72 5 0.858124 121 6 0.793828 140 11 0.912698 99 5 0.956196 222 10 0.638481 159 7 0.8593795 61 6 0.923485 208 9 0.947586 221 11 0.8859467 261 11 0.925927 218 6 0.8916054 156 9 0.798384 239 11 0.7415330 158 8 0.719444 23 2 0.7534158 145 10 0.8776678 236 9 0.7998575 114 3 0.8719980 207 7 0.9542355 113 6 0.788017 291 5 0.601664 138 6 0.8543933 0.860514 0.836589 0.9239348 0.8921944 0.886341 0.813436 0.917925 0.873510 0.829284 0.9169877 0.851054 0.889702 0.905325 0.894389 0.511664 0.8667416 0.9358784 0.9213323 0.9586445 0.8668812 0.9590684 0.899173 0.908266 0.912516 0.938205 0.8247631 0.870598 0.915948 0.918316 0.9494676 0.920631 0.834419 0.777746 0.7317454 0.791454 0.766253 0.7880059 0.9229173 0.9488491 0.9311782 0.868176 0.925426 3 0.907050 0.919558 -0.01821568 9 0.825513 0.762697 0.06281665 7.8631e-01 4.2787e-01 insignificant 1.000000 1.0000000 insignificant 0.85399 5.0930e-01 insignificant 1 1.0000000 insignificant -0.00560958 0.85589247 insignificant 1.00000 insignificant 0.908013 0.8108673 0.0892458 11 0.891942 0.7482015 0.14374079 2.5442e-05 9.9331e-01 weaklyHypermeth 3.0653e-04 1.0000e+00 weaklyHypermeth 4.9853e-03 9.9240e-01 weaklyHypermeth 6.2337e-02 1.00000000 weaklyHypermeth 7.8876e-02 4.6485e-02 weaklyHypermeth 5.2824e-01 insignificant 0.904933 0.9084589 -0.0094732 4 0.857435 0.764502 0.09293222 3.4198e-04 4.4384e-01 lowCoverage 8.1423e-03 1.0000e+00 lowCoverage 5.2566e-01 2.8925e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.07273022 2.8772e-01 insignificant 1.00000000 insignificant 0.920969 0.8108673 0.1146167 9 0.900242 0.7482015 0.1520405 8.3773e-05 9.9986e-01 weaklyHypermeth 9.9730e-04 1.0000e+00 weaklyHypermeth 6.9329e-03 9.9321e-01 weaklyHypermeth 8.9430e-02 1.000000 weaklyHypermeth 0.0844858 5.3709e-02 insignificant 5.4252e-01 insignificant 0.919364 0.9084589 0.0070511 4 0.804803 0.764502 0.0403011 6.8741e-02 6.5443e-01 lowCoverage 7.6379e-01 1.0000e+00 lowCoverage 6.9463e-01 7.2968e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0783398 2.6992e-01 insignificant 1.0000000 insignificant 0.8043956 0.9071429 -0.1173723 4 0.7325374 0.808586 -0.0760487 3.9072e-01 7.3125e-05 lowCoverage 1.0000e+00 1.7411e-03 lowCoverage 9.9522e-01 1.7074e-02 lowCoverage 1.0000e+00 2.7539e-01 lowCoverage -0.0061460 9.2839e-01 insignificant 1.0000e+00 insignificant chr22 22066464 22067464 155304 ENSG00000215478 0.8003656 245 6 0.8425370 181 11 0.893397 208 13 0.9693874 191 5 0.7918390 151 9 0.910695 247 7 0.898076 184 8 0.949334 200 11 0.859878 134 10 0.892396 194 11 0.9471512 331 11 0.875408 98 9 0.8989277 208 13 0.960000 39 5 0.801047 218 9 0.704941 81 4 0.901166 63 5 0.7978811 387 6 0.9497505 259 11 0.873517 211 7 0.9044508 120 9 0.9718298 72 5 0.858124 121 6 0.793828 140 11 0.912698 99 5 0.956196 222 10 0.638481 159 7 0.8593795 61 6 0.923485 208 9 0.947586 221 11 0.8859467 261 11 0.925927 218 6 0.8916054 156 9 0.798384 239 11 0.7415330 158 8 0.719444 23 2 0.7534158 145 10 0.8776678 236 9 0.7998575 114 3 0.8719980 207 7 0.9542355 113 6 0.788017 291 5 0.601664 138 6 0.8543933 0.860514 0.836589 0.9239348 0.8921944 0.886341 0.813436 0.917925 0.873510 0.829284 0.9169877 0.851054 0.889702 0.905325 0.894389 0.511664 0.8667416 0.9358784 0.9213323 0.9586445 0.8668812 0.9590684 0.899173 0.908266 0.912516 0.938205 0.8247631 0.870598 0.915948 0.918316 0.9494676 0.920631 0.834419 0.777746 0.7317454 0.791454 0.766253 0.7880059 0.9229173 0.9488491 0.9311782 0.868176 0.925426 3 0.907050 0.919558 -0.01821568 9 0.825513 0.762697 0.06281665 7.8631e-01 4.2787e-01 insignificant 1.000000 1.0000000 insignificant 0.85399 5.0930e-01 insignificant 1 1.0000000 insignificant -0.00560958 0.85589247 insignificant 1.00000 insignificant 0.908013 0.8108673 0.0892458 11 0.891942 0.7482015 0.14374079 2.5442e-05 9.9331e-01 weaklyHypermeth 3.0653e-04 1.0000e+00 weaklyHypermeth 4.9853e-03 9.9240e-01 weaklyHypermeth 6.2337e-02 1.00000000 weaklyHypermeth 7.8876e-02 4.6485e-02 weaklyHypermeth 5.2824e-01 insignificant 0.904933 0.9084589 -0.0094732 4 0.857435 0.764502 0.09293222 3.4198e-04 4.4384e-01 lowCoverage 8.1423e-03 1.0000e+00 lowCoverage 5.2566e-01 2.8925e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.07273022 2.8772e-01 insignificant 1.00000000 insignificant 0.920969 0.8108673 0.1146167 9 0.900242 0.7482015 0.1520405 8.3773e-05 9.9986e-01 weaklyHypermeth 9.9730e-04 1.0000e+00 weaklyHypermeth 6.9329e-03 9.9321e-01 weaklyHypermeth 8.9430e-02 1.000000 weaklyHypermeth 0.0844858 5.3709e-02 insignificant 5.4252e-01 insignificant 0.919364 0.9084589 0.0070511 4 0.804803 0.764502 0.0403011 6.8741e-02 6.5443e-01 lowCoverage 7.6379e-01 1.0000e+00 lowCoverage 6.9463e-01 7.2968e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0783398 2.6992e-01 insignificant 1.0000000 insignificant 0.8043956 0.9071429 -0.1173723 4 0.7325374 0.808586 -0.0760487 3.9072e-01 7.3125e-05 lowCoverage 1.0000e+00 1.7411e-03 lowCoverage 9.9522e-01 1.7074e-02 lowCoverage 1.0000e+00 2.7539e-01 lowCoverage -0.0061460 9.2839e-01 insignificant 1.0000e+00 insignificant chr22 22986911 22987911 155321 POM121L9P ENSG00000128262 0.9104663 519 10 0.8933712 894 10 0.902152 792 10 0.9316323 759 11 0.8934872 427 8 0.919042 935 11 0.848657 622 8 0.906750 519 8 0.812631 463 8 0.928478 420 8 0.9136624 573 8 0.902244 264 8 0.9313414 426 8 0.890913 300 8 0.917967 503 8 0.952813 192 8 0.718750 13 0 0.9309590 652 10 0.9362428 757 8 0.855086 676 11 0.8488135 258 8 0.8989039 260 8 0.928663 511 11 0.949355 303 8 0.811318 168 8 0.964431 1024 11 0.912583 547 8 0.7645873 352 8 0.922084 902 8 0.955489 919 11 0.9528557 961 11 0.967920 825 11 0.7611539 622 10 0.821176 368 8 0.7893814 547 10 0.687723 108 4 0.8183136 502 8 0.7899432 1018 11 0.9212523 647 11 0.9117635 482 10 0.9464126 420 11 0.922694 421 10 0.957632 460 11 0.9315656 0.895476 0.906841 0.9470882 0.9045738 0.918896 0.905389 0.915750 0.907049 0.932582 0.9075217 0.929003 0.932583 0.912164 0.937505 0.937495 0.6480424 0.9167321 0.9284880 0.9236760 0.9467641 0.9049311 0.942935 0.939742 0.990461 0.961528 0.9253373 0.901631 0.928979 0.954092 0.9590935 0.951579 0.772978 0.823412 0.7374031 0.584347 0.783458 0.7411449 0.9023747 0.9217095 0.9238600 0.912409 0.939042 8 0.917523 0.945204 -0.02617072 10 0.898186 0.855555 0.04263169 1.0000e+00 3.6498e-06 weaklyHypometh 1.000000 0.0025452 weaklyHypometh 0.99977 6.8319e-04 weaklyHypometh 1 0.2277306 insignificant -0.01158461 0.60885396 insignificant 1.00000 insignificant 0.917507 0.7519747 0.1699879 10 0.889702 0.7978405 0.09186150 1.4561e-27 9.8710e-01 weaklyHypermeth 9.1008e-26 1.0000e+00 weaklyHypermeth 1.1047e-10 9.8475e-01 weaklyHypermeth 7.8906e-09 1.00000000 weaklyHypermeth 1.1688e-01 7.9741e-04 weaklyHypermeth 2.2783e-02 weaklyHypermeth 0.917734 0.9266886 -0.0061040 10 0.917480 0.937043 -0.01956282 7.6229e-01 1.2085e-02 weaklyHypometh 1.0000e+00 8.0565e-01 insignificant 6.7158e-01 1.2185e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03711854 2.0264e-02 weaklyHypometh 0.50661230 insignificant 0.945338 0.7519747 0.1938660 10 0.926851 0.7978405 0.1290105 1.1796e-27 9.9999e-01 weaklyHypermeth 1.1796e-25 1.0000e+00 weaklyHypermeth 5.4311e-13 9.9999e-01 weaklyHypermeth 7.7588e-11 1.000000 weaklyHypermeth 0.1284684 4.4749e-04 weaklyHypermeth 1.4435e-02 weaklyHypermeth 0.945180 0.9267490 0.0199439 10 0.791042 0.946036 -0.1549942 2.5027e-02 8.3812e-01 weaklyHypermeth 3.5753e-01 1.0000e+00 insignificant 3.0307e-01 8.3825e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0255339 2.3742e-01 insignificant 1.0000000 insignificant 0.7518963 0.9266584 -0.1559520 11 0.7794623 0.931319 -0.1518568 1.0000e+00 6.0666e-13 weaklyHypometh 1.0000e+00 5.5151e-11 weaklyHypometh 1.0000e+00 3.4583e-08 weaklyHypometh 1.0000e+00 4.3228e-06 weaklyHypometh -0.1540023 2.5201e-04 weaklyHypometh 1.1455e-02 weaklyHypometh chr22 23059375 23060375 155322 ADORA2A,CYTSA ENSG00000100014,ENSG00000128271 0.5998446 86 6 0.6137566 109 6 0.475893 32 4 0.6435516 39 4 0.5694444 35 4 0.706454 151 4 0.458333 17 1 0.664646 73 6 0.666667 22 2 0.744048 35 3 0.6263228 131 6 0.433333 14 0 0.6959064 93 6 0.718182 46 6 0.654630 51 4 0.625000 13 0 NA 0 0 0.6107143 85 6 0.7235450 141 6 0.646397 139 6 0.6666667 14 2 0.6250000 6 0 0.773529 47 3 0.466270 35 5 0.583333 8 0 0.655238 105 6 0.575000 23 3 0.8500000 11 0 0.692617 63 5 0.686728 148 6 0.6010165 109 6 0.740509 147 6 0.6185897 82 6 0.521717 62 6 0.4783163 95 6 0.383929 27 4 0.5242036 57 6 0.6093961 155 6 0.6492063 37 4 0.6774411 57 6 0.5714286 42 2 0.500000 43 2 0.682057 73 4 0.6555112 0.617630 0.547194 0.6188350 0.5773810 0.659976 0.669643 0.628788 0.607143 0.730867 0.6510771 0.558759 0.634085 0.674675 0.590278 0.677807 NA 0.6268707 0.6298186 0.6252602 0.6794997 0.6791572 0.753992 0.490646 0.589286 0.673469 0.6387354 0.794985 0.636435 0.644855 0.6181526 0.690972 0.673764 0.558983 0.5736607 0.507228 0.557567 0.6223612 0.6003401 0.6758297 0.7023810 0.571429 0.642605 0 0.688600 0.667598 -0.00289534 6 0.671297 0.669235 0.00206245 7.5413e-01 3.8534e-01 insignificant 1.000000 1.0000000 insignificant 0.81051 1.3580e-01 insignificant 1 1.0000000 insignificant -0.03457121 0.34164553 lowCoverage 1.00000 lowCoverage 0.688073 0.5774059 0.0757830 6 0.575398 0.4794784 0.09591924 1.6408e-03 9.9981e-01 weaklyHypermeth 1.5626e-02 1.0000e+00 weaklyHypermeth 2.8058e-02 9.9993e-01 weaklyHypermeth 2.8886e-01 1.00000000 insignificant 1.0240e-01 3.5117e-02 lowCoverage 4.4747e-01 lowCoverage 0.688073 0.6785714 -0.0092992 4 0.575398 0.565501 0.00989642 8.4051e-01 7.8488e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9356e-01 8.5066e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.00906123 8.2959e-01 lowCoverage 1.00000000 lowCoverage 0.667598 0.5786164 0.0785488 6 0.669235 0.5593914 0.1098433 1.1705e-03 9.9274e-01 weaklyHypermeth 1.1823e-02 1.0000e+00 weaklyHypermeth 3.3729e-03 9.9930e-01 weaklyHypermeth 5.0342e-02 1.000000 weaklyHypermeth 0.1369671 1.1940e-02 lowCoverage 1.9598e-01 lowCoverage 0.667598 0.6812749 -0.0025594 4 0.669235 0.659751 0.0094834 6.6253e-01 6.3403e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5465e-01 8.6371e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0436324 3.6268e-01 lowCoverage 1.0000000 lowCoverage 0.5774059 0.6785714 -0.0731789 4 0.4794784 0.565501 -0.0860228 9.9996e-01 2.8805e-02 lowCoverage 1.0000e+00 2.7966e-01 lowCoverage 9.9997e-01 1.2458e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0933346 9.5062e-02 lowCoverage 9.0010e-01 lowCoverage chr22 23314034 23315034 155328 GGT1 ENSG00000100031 0.7351867 383 10 0.8742060 192 10 0.872260 148 8 0.9644343 337 10 0.8727273 72 8 0.852421 341 10 0.861985 101 8 0.922148 172 8 0.809053 122 8 0.757118 121 8 0.9340094 293 10 0.926240 101 8 0.9028295 172 8 0.500000 2 0 0.822991 144 8 1.000000 10 0 0.881944 24 3 0.6454339 410 9 0.9480519 160 8 0.920023 232 9 0.9214659 151 8 0.7671942 200 8 0.936493 150 8 0.868352 114 9 0.866720 209 10 0.920696 238 9 0.810209 211 8 0.7517787 84 6 0.778896 133 8 0.881462 304 9 0.9589884 246 9 0.793396 338 10 0.8010552 199 9 0.632193 235 10 0.8750000 139 7 0.872550 147 10 0.5483044 122 7 0.9241321 190 11 0.7534696 306 10 0.8485416 448 10 0.8605701 279 9 0.911073 361 8 0.667665 410 10 0.9189136 0.876946 0.881939 0.9626449 0.9573248 0.922010 0.845937 0.905189 0.893207 0.940559 0.9058898 0.921289 0.882467 NA 0.890622 0.950212 0.8646019 0.7596897 0.9372409 0.9019251 0.8636192 0.7408927 0.909305 0.901718 0.856757 0.896731 0.8915731 0.940573 0.941015 0.943072 0.9398616 0.898171 0.746443 0.546987 0.9279108 0.849927 0.814234 0.8915662 0.7693629 0.8168697 0.8106065 0.890308 0.584317 7 0.896317 0.890993 0.00552493 8 0.718315 0.724829 -0.00651419 2.5948e-01 9.6967e-01 insignificant 1.000000 1.0000000 insignificant 0.42113 9.6628e-01 insignificant 1 1.0000000 insignificant -0.00448441 0.89445615 insignificant 1.00000 insignificant 0.896796 0.8050436 0.0976997 8 0.732869 0.6129188 0.11995021 1.3139e-04 9.9998e-01 weaklyHypermeth 1.4282e-03 1.0000e+00 weaklyHypermeth 2.0033e-02 9.9999e-01 weaklyHypermeth 2.1541e-01 1.00000000 insignificant 7.4614e-02 3.0305e-01 insignificant 1.0000e+00 insignificant 0.897305 0.7793792 0.1146790 8 0.832798 0.759209 0.07358819 1.0590e-09 9.9870e-01 weaklyHypermeth 7.5641e-08 1.0000e+00 weaklyHypermeth 4.7980e-07 9.9963e-01 weaklyHypermeth 5.9975e-05 1.00000000 weaklyHypermeth 0.04188931 4.3539e-01 insignificant 1.00000000 insignificant 0.891653 0.8058252 0.0870335 10 0.780757 0.6566987 0.1240581 7.7769e-03 9.9830e-01 weaklyHypermeth 6.7625e-02 1.0000e+00 weaklyHypermeth 9.2074e-02 9.9996e-01 insignificant 7.3075e-01 1.000000 insignificant 0.0790984 2.6894e-01 insignificant 1.0000e+00 insignificant 0.892691 0.7798114 0.1103302 9 0.827550 0.822477 0.0050728 3.5697e-07 8.9209e-01 weaklyHypermeth 1.8788e-05 1.0000e+00 weaklyHypermeth 1.8246e-05 9.8481e-01 weaklyHypermeth 1.8246e-03 1.000000 weaklyHypermeth 0.0463737 3.7303e-01 insignificant 1.0000000 insignificant 0.8073930 0.7798114 0.0303443 9 0.7661485 0.822477 -0.0563283 2.7346e-01 7.3088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1804e-01 6.3006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0327247 6.7520e-01 insignificant 1.0000e+00 insignificant chr22 23374797 23375797 155329 ENSG00000215456 0.9590433 584 10 0.8662750 921 10 0.881292 764 10 0.9129789 707 12 0.8939678 288 8 0.947114 932 12 0.928639 576 8 0.909238 481 8 0.918501 368 8 0.956118 300 8 0.9447119 681 8 0.915972 172 8 0.9290585 317 8 0.930171 268 8 0.918856 444 8 0.872927 151 6 0.920000 11 1 0.8002503 586 10 0.9074436 684 10 0.926186 599 10 0.8377843 263 8 0.9233324 275 8 0.896566 600 10 0.945772 307 8 0.935616 192 8 0.948422 815 12 0.903254 523 8 0.8205048 346 8 0.935473 842 8 0.879315 921 12 0.9268619 868 12 0.944476 772 12 0.7215455 650 10 0.638915 374 8 0.7421948 378 10 0.763743 168 5 0.7549222 472 8 0.7943874 979 12 0.9219047 606 10 0.9455136 492 12 0.8667395 497 12 0.944352 387 10 0.931343 544 12 0.9488221 0.883775 0.879994 0.9671938 0.9091787 0.931641 0.927116 0.922158 0.915448 0.943554 0.9421034 0.931198 0.938713 0.947110 0.937734 0.904829 0.9366490 0.9087316 0.9177594 0.9303965 0.9424743 0.9345154 0.952685 0.942361 0.937087 0.962183 0.9184102 0.928665 0.932964 0.949380 0.9291631 0.940609 0.716275 0.717412 0.7000163 0.705849 0.753320 0.7743852 0.9315314 0.9397345 0.9134724 0.941784 0.904399 8 0.925862 0.940809 -0.01545450 10 0.919828 0.825085 0.09474250 9.8133e-01 3.6671e-03 weaklyHypometh 1.000000 0.3398024 insignificant 0.88963 2.3174e-01 insignificant 1 1.0000000 insignificant 0.00382248 0.79836456 insignificant 1.00000 insignificant 0.925832 0.7500828 0.1724954 10 0.907494 0.7052495 0.20224423 1.1219e-35 9.9999e-01 weaklyHypermeth 1.6028e-33 1.0000e+00 weaklyHypermeth 1.0757e-12 1.0000e+00 weaklyHypermeth 1.1953e-10 1.00000000 weaklyHypermeth 1.7599e-01 1.9233e-04 weaklyHypermeth 1.0123e-02 weaklyHypermeth 0.925839 0.9271576 -0.0008790 10 0.907494 0.922459 -0.01496567 9.4642e-01 4.2081e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0157e-01 7.0622e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01003343 5.6541e-01 insignificant 1.00000000 insignificant 0.941071 0.7500828 0.1919404 10 0.900740 0.7052495 0.1954901 4.8559e-34 1.0000e+00 weaklyHypermeth 9.7117e-32 1.0000e+00 weaklyHypermeth 4.9234e-13 1.0000e+00 weaklyHypermeth 7.7588e-11 1.000000 weaklyHypermeth 0.1721633 1.0437e-04 weaklyHypermeth 4.9698e-03 weaklyHypermeth 0.941063 0.9271576 0.0143074 10 0.862278 0.922459 -0.0601814 2.0210e-02 9.5429e-01 weaklyHypermeth 3.0621e-01 1.0000e+00 insignificant 2.2141e-01 8.7482e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0138559 4.8297e-01 insignificant 1.0000000 insignificant 0.7503311 0.9271287 -0.1597957 12 0.7640203 0.915998 -0.1519774 1.0000e+00 3.4853e-17 weaklyHypometh 1.0000e+00 6.9706e-15 weaklyHypometh 1.0000e+00 1.4668e-08 weaklyHypometh 1.0000e+00 2.9336e-06 weaklyHypometh -0.1860192 8.0776e-05 weaklyHypometh 5.0485e-03 weaklyHypometh chr22 24101382 24102382 155337 LRP5L ENSG00000100068 0.6997816 225 7 0.6532615 313 7 0.475380 117 7 0.4938970 240 7 0.7842544 115 7 0.724517 239 7 0.562997 140 7 0.706113 178 6 0.649267 90 5 0.730060 101 7 0.5805475 367 7 0.709851 60 5 0.6030792 107 6 0.766056 98 6 0.636382 118 6 0.520106 46 4 0.451128 136 1 0.5297604 208 7 0.6329634 323 7 0.736323 184 6 0.6909337 96 6 0.7805135 53 5 0.848357 156 7 0.472442 101 5 0.615688 177 6 0.662071 430 7 0.618103 90 7 0.5269841 46 4 0.675971 291 7 0.591941 576 8 0.5709771 461 7 0.641176 240 7 0.7396859 229 6 0.800516 172 7 0.5155847 266 6 0.805556 70 3 0.6303018 227 7 0.8599420 433 7 0.4404281 273 7 0.7686590 278 7 0.6919173 251 6 0.738190 133 6 0.770504 288 7 0.7553637 0.712793 0.754388 0.7405463 0.8298679 0.782870 0.792326 0.823892 0.774686 0.799617 0.8084616 0.738674 0.730711 0.847235 0.796626 0.852077 0.7787517 0.7224333 0.7770380 0.8241933 0.8024679 0.8653964 0.816606 0.826600 0.802991 0.742438 0.7468742 0.746369 0.781083 0.681701 0.7185203 0.844511 0.809781 0.872336 0.6497409 0.897385 0.842912 0.8134581 0.6906319 0.7666073 0.6638723 0.698161 0.788573 3 0.726204 0.680898 0.02569649 7 0.573268 0.588415 -0.01514783 1.7407e-01 4.9424e-01 insignificant 1.000000 1.0000000 insignificant 0.96839 1.9262e-01 insignificant 1 1.0000000 insignificant -0.00897693 0.81218385 insignificant 1.00000 insignificant 0.726765 0.7902649 -0.0537342 7 0.557883 0.6319250 -0.07404198 7.2610e-01 2.2266e-03 weaklyHypometh 1.0000e+00 1.4844e-01 insignificant 9.4164e-01 4.7726e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -9.2978e-02 1.4955e-01 insignificant 1.0000e+00 insignificant 0.726576 0.7105478 0.0095435 7 0.536084 0.544951 -0.00886710 1.0193e-01 2.0939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7006e-01 3.8212e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04965345 4.8520e-01 insignificant 1.00000000 insignificant 0.682540 0.7912482 -0.0925629 7 0.627033 0.6568076 -0.0297742 2.2090e-01 3.8027e-03 weaklyHypometh 1.0000e+00 4.2253e-01 insignificant 5.1989e-01 3.0222e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0840012 2.0134e-01 insignificant 1.0000e+00 insignificant 0.680310 0.7105478 -0.0246103 7 0.513582 0.544951 -0.0313692 2.8589e-01 2.5685e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.2207e-01 2.7253e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0406765 5.7607e-01 insignificant 1.0000000 insignificant 0.7909483 0.7111293 0.0679855 7 0.5881692 0.599446 -0.0112770 7.3378e-02 6.5568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4767e-01 8.1427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0433247 6.0847e-01 insignificant 1.0000e+00 insignificant chr22 24685664 24686664 155358 MYO18B ENSG00000133454 0.9085846 181 5 0.8329630 357 5 0.786221 148 5 0.8795019 119 5 0.8298605 121 5 0.881754 301 5 0.834065 218 5 0.838830 156 4 0.819389 128 4 0.781486 72 4 0.8459460 226 5 0.831551 75 4 0.8789633 77 4 0.930000 78 4 0.859408 151 4 0.863077 64 4 0.166667 4 0 0.6582362 119 4 0.9282925 252 4 0.924656 329 5 0.9339286 86 4 0.8417508 21 2 0.848064 153 4 0.919546 121 5 0.752381 41 2 0.911951 283 5 0.859324 110 4 0.6343990 84 4 0.914186 210 4 0.920489 327 5 0.9201628 380 5 0.818392 257 5 0.1879178 238 5 0.098401 145 5 0.1689815 265 5 0.083333 12 1 0.0879674 265 5 0.2438869 364 5 0.8887279 276 5 0.8779843 189 5 0.8709644 137 5 0.822664 128 4 0.857455 171 5 0.8968380 0.835979 0.738096 0.8966040 0.8033989 0.889064 0.837626 0.870811 0.816116 0.854023 0.8287865 0.814147 0.844941 0.914286 0.874329 0.829021 0.4480987 0.7121901 0.9117934 0.9135542 0.9192776 0.8476496 0.871101 0.899644 0.900114 0.921590 0.8140602 0.837820 0.908229 0.922500 0.8896532 0.853507 0.207595 0.114813 0.0032197 0.198070 0.147643 0.2498425 0.8666870 0.8445426 0.8566406 0.816356 0.847588 4 0.852960 0.887977 -0.03464206 5 0.898428 0.919010 -0.02058189 9.9957e-01 1.3791e-01 insignificant 1.000000 1.0000000 insignificant 0.99926 1.7300e-01 insignificant 1 1.0000000 insignificant -0.04224191 0.35317961 lowCoverage 1.00000 lowCoverage 0.852960 0.1693862 0.6706063 5 0.898428 0.2487780 0.64965051 1.5585e-49 1.0000e+00 hypermethylated 7.7925e-47 1.0000e+00 hypermethylated 3.0593e-13 1.0000e+00 hypermethylated 3.8241e-11 1.00000000 hypermethylated 6.6889e-01 1.0252e-12 lowCoverage 3.4172e-10 lowCoverage 0.852913 0.8645949 -0.0067015 5 0.881500 0.889217 -0.00771723 5.6594e-01 3.7715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9625e-01 6.4544e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04958651 2.1109e-01 lowCoverage 1.00000000 lowCoverage 0.887548 0.1692547 0.7079032 5 0.804134 0.2176807 0.5864533 9.5371e-43 1.0000e+00 hypermethylated 4.7685e-40 1.0000e+00 hypermethylated 4.7658e-10 1.0000e+00 hypermethylated 3.4042e-08 1.000000 hypermethylated 0.7111333 4.3594e-11 lowCoverage 2.1797e-08 lowCoverage 0.887869 0.8645949 0.0256660 5 0.905512 0.889217 0.0162950 1.5391e-01 8.2674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1480e-01 9.8629e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0073446 7.9698e-01 lowCoverage 1.0000000 lowCoverage 0.1687403 0.8645949 -0.6745485 5 0.1235743 0.889217 -0.7656428 1.0000e+00 3.9049e-26 hypomethylated 1.0000e+00 1.3016e-23 hypomethylated 1.0000e+00 4.8662e-08 hypomethylated 1.0000e+00 5.4069e-06 hypomethylated -0.7184779 7.6305e-08 lowCoverage 7.1238e-05 lowCoverage chr22 24847509 24848509 155364 ENSG00000209345,ENSG00000223056 0.8307217 337 5 0.7894372 289 5 0.643557 115 5 0.9128429 307 5 0.7743590 62 5 0.885438 323 5 0.796893 123 5 0.921216 161 5 0.864593 112 5 0.972593 96 5 0.8773737 222 5 0.928571 48 3 0.8991975 145 5 0.950000 38 5 0.844857 156 5 0.800000 18 1 0.882143 48 4 0.8601174 449 5 0.8209784 194 4 0.889749 281 5 0.9607143 38 3 0.8559879 56 4 0.881125 156 5 0.722222 41 5 0.859524 62 5 0.929351 325 5 0.830414 68 5 0.9022222 58 5 0.899720 242 5 0.950074 339 5 0.9662975 335 5 0.879476 273 5 0.4314013 178 5 0.501414 86 4 0.8887218 302 5 0.329167 15 1 0.4534236 154 5 0.7409191 201 5 0.9335923 314 5 0.8927318 292 5 0.9277526 331 5 0.875470 380 5 0.901317 332 5 0.8500360 0.810735 0.630820 0.9144227 0.7641382 0.899468 0.835544 0.920126 0.892831 0.981091 0.8783614 0.909921 0.907279 0.961111 0.866027 0.752778 0.9165052 0.8806212 0.8616869 0.8952179 0.9770833 0.8817111 0.890168 0.653395 0.891534 0.937612 0.8229533 0.929506 0.933455 0.960748 0.9674754 0.888048 0.479539 0.588171 0.9134503 0.349255 0.478763 0.7888883 0.9332950 0.9226539 0.9405976 0.870818 0.904216 4 0.847049 0.912104 -0.06878290 5 0.860397 0.909715 -0.04931747 9.9871e-01 2.1133e-03 weaklyHypometh 1.000000 0.2348118 insignificant 0.99661 1.6906e-02 weaklyHypometh 1 0.7540382 insignificant -0.02919541 0.26496708 lowCoverage 1.00000 lowCoverage 0.847049 0.6068376 0.2318944 5 0.860397 0.6353103 0.22508686 5.9124e-11 1.0000e+00 hypermethylated 1.1825e-09 1.0000e+00 hypermethylated 5.3575e-06 1.0000e+00 hypermethylated 1.5757e-04 1.00000000 hypermethylated 2.9972e-01 1.7282e-02 lowCoverage 2.5794e-01 lowCoverage 0.847049 0.9072165 -0.0598647 5 0.860397 0.907560 -0.04716314 9.9221e-01 2.6733e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8924e-01 1.0003e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04894082 2.2622e-02 lowCoverage 0.53861374 lowCoverage 0.912104 0.6068376 0.3043081 5 0.909715 0.6353103 0.2744043 4.4097e-10 1.0000e+00 hypermethylated 9.7994e-09 1.0000e+00 hypermethylated 9.2189e-06 1.0000e+00 hypermethylated 2.6340e-04 1.000000 hypermethylated 0.3289195 1.1719e-02 lowCoverage 1.9598e-01 lowCoverage 0.912104 0.9072165 0.0066588 5 0.909715 0.907560 0.0021543 6.6327e-01 6.8697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2962e-01 7.9302e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0197454 3.8998e-01 lowCoverage 1.0000000 lowCoverage 0.6068376 0.9072165 -0.2980246 5 0.6353103 0.907560 -0.2722500 9.9998e-01 2.6766e-05 hypomethylated 1.0000e+00 7.0436e-04 hypomethylated 1.0000e+00 1.3239e-04 hypomethylated 1.0000e+00 5.7561e-03 hypomethylated -0.3486649 9.7802e-03 lowCoverage 2.0376e-01 lowCoverage chr22 26167712 26168712 155470 ENSG00000200443 0.8010941 350 11 0.8134390 200 12 0.765702 211 12 0.8703133 198 8 0.9066064 112 9 0.849382 290 12 0.871982 168 10 0.888561 195 11 0.820576 158 12 0.951347 132 10 0.8755899 449 12 0.811111 91 5 0.7638086 265 12 NA 0 0 0.847348 141 9 0.830159 64 5 0.837459 94 5 0.8705556 262 7 0.9209743 166 10 0.870143 336 12 0.9728535 132 10 0.5818559 115 6 0.919155 270 11 0.855492 136 10 0.929464 66 5 0.860433 230 12 0.820779 129 10 0.7799348 69 4 0.769946 121 9 0.883126 304 11 0.8197319 222 11 0.879063 502 12 0.4617810 256 12 0.445402 213 10 0.6454094 255 9 0.289355 108 8 0.7139083 113 10 0.4599058 353 12 0.4151345 324 9 0.6489240 430 9 0.4871782 292 7 0.307378 362 8 0.633190 278 8 0.7778065 0.798828 0.766814 0.8580692 0.8830451 0.872358 0.870803 0.889150 0.816051 0.918309 0.8797324 0.896479 0.770979 NA 0.881551 0.746596 0.8624965 0.8238431 0.9018898 0.8898171 0.9757605 0.4698185 0.838483 0.775592 0.941776 0.867318 0.8519456 0.830821 0.792935 0.851689 0.8526080 0.879595 0.382743 0.387391 0.4889247 0.093223 0.700356 0.4608383 0.2812305 0.5735837 0.4178959 0.192886 0.503404 4 0.839773 0.844512 -0.00715249 11 0.839941 0.853338 -0.01339679 9.7132e-01 4.4295e-01 insignificant 1.000000 1.0000000 insignificant 0.83062 5.8890e-01 insignificant 1 1.0000000 insignificant 0.01153055 0.71731992 insignificant 1.00000 insignificant 0.839773 0.4506934 0.3907220 12 0.839941 0.5048011 0.33514035 8.4262e-42 1.0000e+00 hypermethylated 2.1065e-39 1.0000e+00 hypermethylated 2.9329e-15 1.0000e+00 hypermethylated 1.2136e-12 1.00000000 hypermethylated 3.4822e-01 2.2567e-03 weaklyHypermeth 5.3730e-02 weaklyHypermeth 0.839773 0.4205219 0.4310117 9 0.839941 0.506185 0.33375616 3.3685e-42 9.9932e-01 hypermethylated 3.3685e-39 1.0000e+00 hypermethylated 7.2072e-17 9.9972e-01 hypermethylated 7.2072e-14 1.00000000 hypermethylated 0.35248913 4.9805e-03 weaklyHypermeth 0.26213077 insignificant 0.844512 0.4506934 0.3887121 11 0.853338 0.5048011 0.3485371 1.1146e-26 1.0000e+00 hypermethylated 9.2884e-25 1.0000e+00 hypermethylated 2.6603e-11 1.0000e+00 hypermethylated 2.6603e-09 1.000000 hypermethylated 0.3366927 1.6210e-03 weaklyHypermeth 4.0525e-02 weaklyHypermeth 0.844512 0.4205219 0.4375684 9 0.853338 0.506185 0.3471530 1.1018e-27 9.9990e-01 hypermethylated 1.1018e-24 1.0000e+00 hypermethylated 2.8461e-13 9.9993e-01 hypermethylated 2.8461e-10 1.000000 hypermethylated 0.3409586 3.5042e-03 weaklyHypermeth 0.3185597 insignificant 0.4506934 0.4205219 0.0265021 9 0.5048011 0.506185 -0.0013842 1.1004e-01 1.9164e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4300e-01 3.0414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0042659 9.6332e-01 insignificant 1.0000e+00 insignificant chr22 26230055 26231055 155473 ENSG00000200443 0.8037087 206 4 0.6366667 99 4 0.647151 124 5 0.9216011 226 4 0.8950000 61 4 0.880798 281 5 0.868914 94 5 0.878654 130 5 0.751914 117 5 0.867222 81 4 0.9035164 184 5 0.620952 43 4 0.8348208 124 4 0.964286 18 1 0.809615 118 5 0.714286 29 3 0.682828 25 2 0.4314021 242 4 0.8170130 96 4 0.854303 205 5 0.9182577 69 5 0.6355190 126 4 0.878787 105 4 0.864663 95 5 0.906044 48 4 0.811128 158 5 0.798319 99 5 0.9354248 97 5 0.919680 79 4 0.895916 157 5 0.7128701 118 5 0.941422 226 5 0.5917078 114 5 0.671123 86 4 0.9777778 119 4 0.388889 33 2 0.8401786 73 5 0.3684327 190 5 0.7182504 237 4 0.7163012 205 4 0.8469732 206 4 0.540246 218 4 0.756344 281 4 0.8246530 0.757167 0.631492 0.8966091 0.8782083 0.928724 0.889605 0.867386 0.753517 0.896611 0.9155452 0.822905 0.777978 0.872725 0.811587 0.558719 0.7602525 0.5392892 0.8511721 0.8334689 0.9225481 0.5521101 0.859437 0.835507 0.837486 0.838458 0.8216387 0.929170 0.856974 0.845956 0.6798225 0.924541 0.521682 0.766290 0.9994444 0.261333 0.775022 0.2501096 0.6513552 0.6534625 0.7984809 0.410257 0.707466 4 0.811426 0.827887 -0.01597782 5 0.804166 0.836510 -0.03234346 9.0976e-01 1.4745e-01 insignificant 1.000000 1.0000000 insignificant 0.94078 3.8759e-02 weaklyHypometh 1 1.0000000 insignificant -0.06226997 0.13297197 lowCoverage 1.00000 lowCoverage 0.811426 0.5886179 0.2283147 5 0.804166 0.6384543 0.16571216 2.4198e-04 9.9309e-01 hypermethylated 2.5742e-03 1.0000e+00 hypermethylated 4.8874e-02 9.5659e-01 weaklyHypermeth 4.5404e-01 1.00000000 insignificant 1.4955e-01 1.9862e-01 lowCoverage 1.0000e+00 lowCoverage 0.811426 0.6547515 0.1628374 4 0.804166 0.727195 0.07697102 2.9457e-04 4.4894e-01 lowCoverage 7.4766e-03 1.0000e+00 lowCoverage 1.4180e-03 3.9681e-01 lowCoverage 4.5741e-02 1.00000000 lowCoverage 0.07360970 2.4332e-01 lowCoverage 1.00000000 lowCoverage 0.827887 0.5886179 0.2426511 5 0.836510 0.6384543 0.1980556 4.0395e-04 9.9981e-01 hypermethylated 4.4390e-03 1.0000e+00 hypermethylated 4.9244e-03 9.7111e-01 weaklyHypermeth 6.7458e-02 1.000000 weaklyHypermeth 0.2118178 8.6724e-02 lowCoverage 7.8363e-01 lowCoverage 0.827887 0.6547515 0.1723346 4 0.836510 0.727195 0.1093145 1.5425e-04 8.6450e-01 lowCoverage 4.9758e-03 1.0000e+00 lowCoverage 1.4237e-04 8.8159e-01 lowCoverage 6.7794e-03 1.000000 lowCoverage 0.1358797 5.0609e-02 lowCoverage 1.0000000 lowCoverage 0.5886179 0.6547515 -0.0800033 4 0.6384543 0.727195 -0.0887411 8.2085e-01 4.5494e-02 lowCoverage 1.0000e+00 3.9907e-01 lowCoverage 7.8878e-01 8.9926e-02 lowCoverage 1.0000e+00 8.9926e-01 lowCoverage -0.0759381 5.1464e-01 lowCoverage 1.0000e+00 lowCoverage chr22 26355954 26356954 155478 ENSG00000200443 0.3667989 79 7 0.4181688 138 8 0.480594 111 9 0.3776190 66 5 0.3684945 130 9 0.545005 152 9 0.265649 198 9 0.456279 109 9 0.369878 140 9 0.215238 166 9 0.4581590 223 9 0.408333 46 6 0.3054701 234 9 0.138889 16 1 0.312643 228 9 0.363636 72 9 0.283117 110 7 0.4259259 55 3 0.2712879 206 8 0.326637 171 9 0.4831628 77 7 0.3181933 76 4 0.367582 140 8 0.300316 82 10 0.308824 31 1 0.400568 153 8 0.294958 118 11 0.5371795 66 4 0.314569 71 6 0.254987 202 8 0.3937293 175 8 0.396421 142 9 0.3701440 119 8 0.516765 157 7 0.6657576 84 7 0.738095 16 0 0.4604901 71 6 0.5592593 105 8 0.4254448 80 6 0.5674603 80 7 0.1166667 17 1 0.323958 48 5 0.448860 51 4 0.2808739 0.336223 0.492538 0.2480377 0.2720494 0.406838 0.249964 0.496103 0.365542 0.229716 0.4371891 0.524725 0.210589 0.287616 0.262445 0.248751 0.2282836 0.4780220 0.1804862 0.1592715 0.4351228 0.1422846 0.429447 0.298778 0.315845 0.343837 0.2920483 0.583820 0.286803 0.226376 0.3590445 0.383448 0.477987 0.550280 0.8323343 0.737415 0.607822 0.6628205 0.3296760 0.5132130 0.2438069 0.446734 0.404691 0 0.309434 0.346587 -0.03109422 9 0.366208 0.352574 0.01363386 1.4834e-01 1.1881e-01 insignificant 1.000000 1.0000000 insignificant 0.33134 5.1310e-01 insignificant 1 1.0000000 insignificant -0.00631637 0.84622684 insignificant 1.00000 insignificant 0.309434 0.5652174 -0.2476562 9 0.366208 0.4967477 -0.13053985 3.1126e-01 1.2873e-14 hypomethylated 1.0000e+00 4.2911e-12 hypomethylated 7.7392e-01 3.8424e-05 hypomethylated 1.0000e+00 0.01280801 hypomethylated -1.9386e-01 1.4430e-02 weaklyHypometh 2.1864e-01 insignificant 0.309434 0.4057971 -0.1120687 4 0.366208 0.488164 -0.12195662 9.9635e-01 6.1867e-04 lowCoverage 1.0000e+00 1.6666e-01 lowCoverage 9.6543e-01 1.3169e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.01858694 8.2317e-01 lowCoverage 1.00000000 lowCoverage 0.346587 0.5652174 -0.2141844 9 0.352574 0.4967477 -0.1441737 7.7106e-01 3.6655e-09 hypomethylated 1.0000e+00 1.2218e-06 hypomethylated 8.6926e-01 1.3759e-03 weaklyHypometh 1.0000e+00 0.343963 insignificant -0.1875443 1.6633e-02 weaklyHypometh 2.4460e-01 insignificant 0.346587 0.4057971 -0.0712407 4 0.352574 0.488164 -0.1355905 9.9500e-01 1.1721e-03 lowCoverage 1.0000e+00 2.9302e-01 lowCoverage 9.3956e-01 1.3788e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0122706 8.8333e-01 lowCoverage 1.0000000 lowCoverage 0.5652174 0.4057971 0.1897587 4 0.4967477 0.488164 0.0085832 1.7613e-03 5.2255e-01 lowCoverage 1.0361e-01 1.0000e+00 lowCoverage 1.0612e-01 7.2906e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1752737 9.9297e-02 lowCoverage 9.2801e-01 lowCoverage chr22 26396311 26397311 155480 ENSG00000200443 0.1703538 395 10 0.1096413 426 11 0.147175 308 11 0.1266279 397 10 0.0870391 236 10 0.067868 448 11 0.063439 415 11 0.064625 265 10 0.041377 283 10 0.066432 218 10 0.1229243 374 11 0.169350 277 10 0.0060663 242 10 0.487395 82 2 0.144039 319 10 0.140863 252 10 0.014286 212 9 0.1390810 425 9 0.1038462 325 8 0.106902 440 11 0.1347222 158 9 0.0000000 166 9 0.128802 326 10 0.141038 156 7 0.035546 157 8 0.143140 472 11 0.075051 246 7 0.1692164 113 5 0.152230 313 7 0.106314 522 11 0.1563456 460 11 0.114829 509 11 0.2718746 297 9 0.300049 206 7 0.2010067 512 10 0.113514 121 7 0.2897204 181 8 0.1139136 440 11 0.0447895 611 11 0.0531518 500 11 0.0304365 376 10 0.132403 490 9 0.064349 498 10 0.0681019 0.055178 0.086141 0.0562855 0.0617652 0.073495 0.057606 0.062874 0.048933 0.050690 0.1357615 0.078698 0.019063 NA 0.035447 0.090668 0.0737859 0.0809234 0.0112963 0.0764991 0.0671906 0.0000000 0.064216 0.094468 0.028948 0.069692 0.0450513 0.085181 0.093125 0.030062 0.0849772 0.109580 0.406114 0.396172 0.4333886 0.324802 0.370739 0.2208639 0.0198910 0.0217338 0.0069308 0.052732 0.061788 7 0.074144 0.088382 -0.00370797 11 0.153449 0.127581 0.02586718 4.9880e-01 7.6042e-01 insignificant 1.000000 1.0000000 insignificant 0.43094 9.8073e-01 insignificant 1 1.0000000 insignificant 0.00586378 0.82743202 insignificant 1.00000 insignificant 0.074144 0.3511668 -0.2404993 11 0.153449 0.1759131 -0.02246448 9.5029e-01 7.6470e-15 hypomethylated 1.0000e+00 3.8235e-12 hypomethylated 9.5833e-01 1.4702e-06 hypomethylated 1.0000e+00 0.00073509 hypomethylated -9.6046e-02 4.4383e-02 weaklyHypometh 5.1608e-01 insignificant 0.073910 0.0363636 0.0338690 11 0.130412 0.132471 -0.00205908 8.8957e-02 6.9235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1893e-02 2.1508e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.05394070 7.3831e-02 insignificant 1.00000000 insignificant 0.088382 0.3511668 -0.2492772 11 0.127581 0.1759131 -0.0483317 9.8275e-01 2.0276e-09 hypomethylated 1.0000e+00 1.0138e-06 hypomethylated 9.7856e-01 3.3605e-05 hypomethylated 1.0000e+00 0.016802 hypomethylated -0.1019103 3.2146e-02 weaklyHypometh 3.8684e-01 insignificant 0.088276 0.0363636 0.0433071 11 0.134956 0.132471 0.0024848 1.7812e-01 5.6606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9528e-01 9.1920e-02 insignificant 1.0000e+00 1.000000 insignificant 0.0480769 6.4980e-02 insignificant 1.0000000 insignificant 0.3517674 0.0363636 0.2972437 11 0.2052319 0.132471 0.0727606 1.5526e-05 9.9995e-01 hypermethylated 2.2181e-03 1.0000e+00 hypermethylated 1.2822e-02 9.6985e-01 weaklyHypermeth 8.0134e-01 1.0000e+00 insignificant 0.1499872 6.0356e-03 weaklyHypermeth 1.5228e-01 insignificant chr22 26535954 26536954 155485 MN1 ENSG00000169184 0.5379034 325 9 0.3501164 230 10 0.441296 213 8 0.4194625 285 9 0.2025162 109 8 0.478586 318 9 0.306746 183 9 0.341880 235 9 0.233980 297 9 0.388644 250 8 0.4280321 271 9 0.243256 174 8 0.1497185 326 8 0.322209 101 5 0.262926 178 8 0.322285 123 7 0.085561 184 7 0.4666773 440 9 0.2187136 211 9 0.274638 427 9 0.6610614 90 8 0.4764613 174 8 0.457073 165 8 0.462847 112 8 0.501043 254 9 0.463944 291 9 0.381223 166 9 0.3773096 95 8 0.539378 191 8 0.369490 405 9 0.4023018 322 9 0.492950 317 9 0.0075819 340 9 0.022899 203 9 0.0050505 256 8 0.111408 102 8 0.0354928 159 9 0.1946926 397 9 0.4545109 302 9 0.5088575 293 9 0.3605692 310 9 0.300849 347 9 0.400414 223 9 0.5134249 0.294215 0.340373 0.3730082 0.1917992 0.463314 0.320697 0.222918 0.213799 0.319449 0.4026641 0.209181 0.103702 0.312638 0.173124 0.281969 0.0661166 0.4417506 0.1812567 0.2520817 0.7038126 0.3604256 0.377957 0.420324 0.465885 0.366942 0.3652858 0.394854 0.405845 0.327481 0.3810555 0.476965 0.009624 0.017339 0.0046457 0.015443 0.068154 0.1754443 0.3877036 0.4191273 0.3118491 0.197054 0.428276 8 0.312295 0.418189 -0.10613641 9 0.349824 0.436363 -0.08653822 1.0000e+00 1.2473e-05 weaklyHypometh 1.000000 0.0041577 weaklyHypometh 1.00000 4.0152e-06 weaklyHypometh 1 0.0020076 weaklyHypometh -0.14166631 0.00039425 weaklyHypometh 0.39425 insignificant 0.312295 0.0707904 0.2521119 9 0.349824 0.1039637 0.24586066 2.1823e-17 1.0000e+00 hypermethylated 6.6131e-16 1.0000e+00 hypermethylated 4.8546e-15 1.0000e+00 hypermethylated 1.2136e-12 1.00000000 hypermethylated 2.6090e-01 2.1126e-05 hypermethylated 1.5090e-03 hypermethylated 0.310869 0.3891525 -0.0530941 9 0.300191 0.364287 -0.06409597 9.1822e-01 1.1536e-02 weaklyHypometh 1.0000e+00 8.0565e-01 insignificant 9.9433e-01 9.2789e-03 weaklyHypometh 1.0000e+00 0.77324522 insignificant -0.08128286 1.0279e-01 insignificant 1.00000000 insignificant 0.418189 0.0707904 0.3578204 9 0.436363 0.1039637 0.3323989 3.8163e-31 1.0000e+00 hypermethylated 4.7704e-29 1.0000e+00 hypermethylated 1.3480e-17 1.0000e+00 hypermethylated 6.7401e-15 1.000000 hypermethylated 0.4025695 5.5239e-07 hypermethylated 7.8913e-05 hypermethylated 0.416764 0.3891525 0.0623403 9 0.392499 0.364287 0.0282115 1.2308e-02 7.4116e-01 weaklyHypermeth 2.1593e-01 1.0000e+00 insignificant 1.1820e-01 8.6588e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0603834 2.0115e-01 insignificant 1.0000000 insignificant 0.0701996 0.3891525 -0.3214971 9 0.0643600 0.364287 -0.2999273 1.0000e+00 2.2754e-15 hypomethylated 1.0000e+00 3.2506e-13 hypomethylated 1.0000e+00 5.0052e-11 hypomethylated 1.0000e+00 5.0052e-08 hypomethylated -0.3421860 7.2252e-05 hypomethylated 4.8168e-03 hypomethylated chr22 26536281 26537281 155486 MN1 ENSG00000169184 0.5932424 347 11 0.3473704 251 13 0.481979 248 11 0.4534858 294 9 0.2327048 123 9 0.497828 368 12 0.394411 199 10 0.396179 292 12 0.328054 331 12 0.446344 274 11 0.4544416 323 12 0.241307 189 9 0.1679716 398 11 0.333046 129 8 0.348771 203 11 0.270753 132 8 0.221317 194 7 0.5106140 471 12 0.2850081 223 11 0.356459 471 12 0.6815857 103 9 0.5205404 202 11 0.486210 185 11 0.478214 142 11 0.549135 275 11 0.483282 346 12 0.412306 197 11 0.3891256 110 10 0.594394 201 8 0.435170 459 12 0.4200270 369 12 0.505678 372 12 0.1371454 385 12 0.100508 209 9 0.0871212 289 9 0.200630 112 8 0.0699281 207 12 0.3090680 449 12 0.4575499 312 10 0.5066431 303 9 0.3704269 321 11 0.270081 360 11 0.384934 237 11 0.5340736 0.297449 0.363197 0.3855246 0.2053948 0.471911 0.349721 0.249764 0.244489 0.343747 0.4126986 0.212210 0.114086 0.315874 0.207984 0.272175 0.1099113 0.4579641 0.2063393 0.2814869 0.7064672 0.3823792 0.395518 0.426237 0.486227 0.380446 0.3780661 0.396031 0.434477 0.352070 0.3890094 0.483882 0.056416 0.043882 0.0321302 0.056041 0.079476 0.2120156 0.3978925 0.4251289 0.3221015 0.194181 0.421230 8 0.330403 0.438008 -0.10252815 12 0.383016 0.465929 -0.08291308 1.0000e+00 5.0904e-06 weaklyHypometh 1.000000 0.0025452 weaklyHypometh 1.00000 2.1268e-06 weaklyHypometh 1 0.0020076 weaklyHypometh -0.12824114 0.00093488 weaklyHypometh 0.46744 insignificant 0.330403 0.1049121 0.2335789 12 0.383016 0.1726646 0.21035152 2.2640e-17 1.0000e+00 hypermethylated 6.6588e-16 1.0000e+00 hypermethylated 1.4159e-14 1.0000e+00 hypermethylated 2.8318e-12 1.00000000 hypermethylated 2.1733e-01 6.2815e-04 hypermethylated 2.0938e-02 hypermethylated 0.329172 0.3900848 -0.0453030 9 0.347390 0.373170 -0.02577960 7.2037e-01 5.1325e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6853e-01 4.5628e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.02986260 5.4883e-01 insignificant 1.00000000 insignificant 0.438008 0.1049121 0.3346117 12 0.465929 0.1726646 0.2932646 8.0662e-32 1.0000e+00 hypermethylated 1.1523e-29 1.0000e+00 hypermethylated 3.6740e-18 1.0000e+00 hypermethylated 3.6740e-15 1.000000 hypermethylated 0.3455722 2.0407e-05 hypermethylated 1.3447e-03 hypermethylated 0.436821 0.3900848 0.0685217 9 0.434462 0.373170 0.0612925 1.1922e-03 9.3295e-01 weaklyHypermeth 2.9537e-02 1.0000e+00 weaklyHypermeth 1.1253e-02 9.6744e-01 weaklyHypermeth 2.8309e-01 1.000000 insignificant 0.0983785 7.4569e-02 insignificant 1.0000000 insignificant 0.1044323 0.3900848 -0.3027225 9 0.1474850 0.373170 -0.2256848 9.9999e-01 2.8265e-14 hypomethylated 1.0000e+00 3.1406e-12 hypomethylated 1.0000e+00 7.0667e-10 hypomethylated 1.0000e+00 2.3556e-07 hypomethylated -0.2471936 1.6070e-03 weaklyHypometh 5.1839e-02 weaklyHypometh chr22 26734825 26735825 155494 PITPNB ENSG00000180957 0.2314895 324 5 0.0170213 199 5 0.041098 99 5 0.0485331 230 5 0.0260870 118 5 0.116631 433 5 0.036029 165 5 0.090716 140 5 0.163832 122 5 0.121445 62 5 0.0612245 178 5 0.120000 44 5 0.0359231 80 5 0.092308 56 5 0.023996 143 5 0.080000 102 5 NA 0 0 0.0883285 472 5 0.0327796 213 5 0.028476 307 5 0.0768116 77 5 0.3000000 12 0 0.036770 126 5 0.074286 138 5 0.140000 50 5 0.273027 233 5 0.062879 144 5 0.0086957 57 2 0.073679 141 5 0.024555 279 5 0.0413999 317 5 0.152798 247 5 0.0250000 158 5 0.000000 198 5 0.0404494 199 5 0.063492 61 3 0.0251225 144 5 0.0054805 336 5 0.0473444 322 5 0.0867925 266 5 0.0460701 196 5 0.216155 455 5 0.086727 248 5 0.0835547 0.018954 0.041007 0.0526521 0.0290488 0.130360 0.037664 0.099145 0.031781 0.132938 0.0687105 0.135371 0.037437 0.103796 0.036442 0.089083 NA 0.0994222 0.0348813 0.0318988 0.0862604 0.3158661 0.056131 0.082845 0.156332 0.041313 0.0701998 0.009683 0.082739 0.026613 0.0462923 0.168420 0.028166 0.000000 0.0458761 0.057766 0.033955 0.0061617 0.0523892 0.0953283 0.0504946 0.112648 0.095284 5 0.074892 0.080814 -0.00227177 5 0.188032 0.117446 0.07058662 6.2468e-01 9.0447e-01 insignificant 1.000000 1.0000000 insignificant 0.60934 8.1636e-01 insignificant 1 1.0000000 insignificant -0.02878105 0.35498664 lowCoverage 1.00000 lowCoverage 0.074935 0.0310219 0.0460654 5 0.219371 0.0217552 0.19761601 2.9347e-02 9.9572e-01 weaklyHypermeth 2.2574e-01 1.0000e+00 insignificant 1.1003e-02 9.9989e-01 weaklyHypermeth 1.3098e-01 1.00000000 insignificant 5.0037e-02 5.0934e-03 lowCoverage 9.7950e-02 lowCoverage 0.074935 0.0888291 -0.0153555 5 0.219371 0.064647 0.15472454 9.4579e-01 3.4552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0246e-01 2.4925e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01999045 5.7729e-01 lowCoverage 1.00000000 lowCoverage 0.080858 0.0310219 0.0494446 5 0.137020 0.0217552 0.1152649 4.6928e-02 9.5968e-01 weaklyHypermeth 3.3520e-01 1.0000e+00 insignificant 1.2817e-02 9.9796e-01 weaklyHypermeth 1.4732e-01 1.000000 insignificant 0.0788176 1.7055e-02 lowCoverage 2.4598e-01 lowCoverage 0.081363 0.0894418 -0.0139521 5 0.260303 0.198269 0.0620344 8.9174e-01 3.5301e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4265e-01 1.0976e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0087906 8.3633e-01 lowCoverage 1.0000000 lowCoverage 0.0310219 0.0888291 -0.0623712 5 0.0217552 0.064647 -0.0428915 9.9999e-01 3.7121e-03 weaklyHypometh 1.0000e+00 5.2283e-02 weaklyHypometh 1.0000e+00 2.4870e-03 weaklyHypometh 1.0000e+00 5.7837e-02 weaklyHypometh -0.0700270 8.7512e-02 lowCoverage 8.9065e-01 lowCoverage chr22 27312926 27313926 155581 TTC28 ENSG00000100154 0.7997101 219 5 0.7246032 63 3 0.920000 68 3 0.9000000 71 3 0.4866667 23 3 0.912024 141 5 0.700833 38 3 0.971429 25 2 0.665818 41 2 1.000000 31 2 0.9485528 66 5 0.935065 31 3 0.7724359 47 4 NA 0 0 0.750000 38 2 0.892593 24 3 0.904444 30 3 0.8146429 110 3 0.9123932 44 3 0.935838 133 5 0.9200000 28 2 0.5913043 48 3 0.851922 146 5 0.791111 66 3 0.860227 53 4 0.814457 61 4 0.811916 79 5 0.9894737 26 1 0.804669 55 5 0.950000 49 4 0.8857143 41 5 0.824910 187 5 0.7136905 41 3 0.870370 48 2 0.8703297 50 5 0.870000 48 2 0.8645455 40 2 0.8338817 44 5 0.9337848 126 5 0.8762575 154 5 0.8524517 123 5 0.907408 155 5 0.898937 133 5 0.9145465 0.881677 0.942788 0.9759615 0.7349359 0.930409 0.848718 0.949176 0.890927 0.998642 0.9728013 0.900724 0.931211 NA 0.950565 0.841078 0.8688034 0.9122424 0.9595455 0.9505727 0.9608974 0.8804348 0.892793 0.877350 0.880299 0.894560 0.8959377 0.971660 0.791110 0.987981 0.9780220 0.919938 0.896410 0.915420 0.9451606 0.910417 0.804065 0.8889916 0.9580070 0.9638663 0.9347945 0.973099 0.904929 2 0.918745 0.895113 0.01761914 3 0.864600 0.842128 0.02247204 2.0655e-01 8.8688e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.51864 5.8963e-01 lowCoverage 1 1.0000000 lowCoverage -0.00199034 0.96211237 lowCoverage 1.00000 lowCoverage 0.918745 0.8671587 0.0417237 2 0.864600 0.8262634 0.03833679 4.8663e-02 9.5468e-01 lowCoverage 3.5781e-01 1.0000e+00 lowCoverage 3.0685e-01 8.5612e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.1821e-03 9.5609e-01 lowCoverage 1.0000e+00 lowCoverage 0.918745 0.9450072 -0.0235785 3 0.864600 0.886623 -0.02202320 9.2102e-01 1.9268e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9362e-01 2.0566e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.05444935 1.1134e-01 lowCoverage 1.00000000 lowCoverage 0.895113 0.8671587 0.0210027 2 0.842128 0.8262634 0.0158648 3.2058e-01 8.9105e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.8929e-01 8.6411e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0041724 9.1510e-01 lowCoverage 1.0000e+00 lowCoverage 0.895113 0.9450072 -0.0417548 5 0.842128 0.886623 -0.0444952 9.5571e-01 2.9220e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.6191e-01 1.3383e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0524590 1.2354e-01 lowCoverage 1.0000000 lowCoverage 0.8671587 0.9450072 -0.0636000 2 0.8262634 0.886623 -0.0603600 8.6358e-01 3.2818e-02 lowCoverage 1.0000e+00 3.0671e-01 lowCoverage 8.7800e-01 1.6195e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0566314 8.7573e-02 lowCoverage 8.9065e-01 lowCoverage chr22 27600622 27601622 155588 ENSG00000216570 0.7253735 193 6 0.7344621 120 6 0.740741 34 4 0.7385340 193 6 0.5333333 20 3 0.704237 162 6 0.717504 59 4 0.773810 42 6 0.571429 7 1 0.888889 16 1 0.7348806 84 6 0.500000 4 0 0.8194444 23 1 0.772727 20 1 0.781250 30 3 1.000000 17 1 NA 0 0 0.7270034 299 6 0.7104342 81 6 0.730937 125 6 0.7083333 14 0 1.0000000 18 3 0.709596 51 4 0.759259 43 4 0.880952 127 4 0.777778 98 6 0.714286 21 1 0.6111111 11 1 0.756250 86 6 0.740979 134 6 0.7451686 131 6 0.724747 169 6 0.7400794 103 6 0.735441 83 6 0.7122387 363 6 0.837500 75 4 0.7550287 59 4 0.7186022 177 6 0.7202312 150 6 0.7533885 142 6 0.7342796 150 6 0.743056 129 6 0.726307 166 6 0.6566356 0.708137 0.609610 0.6826150 0.8519205 0.579107 0.790508 0.749035 0.691303 0.912913 0.7065238 0.641110 0.941441 0.744472 0.780405 1.000000 NA 0.7097845 0.6908926 0.7042042 0.8243243 1.0000000 0.712531 0.687688 0.665380 0.765766 0.4980695 0.558293 0.755068 0.696462 0.6883904 0.628174 0.707207 0.765786 0.6707341 0.685135 0.757689 0.6601381 0.6294258 0.7663430 0.7512870 0.619369 0.630372 1 0.781557 0.796235 -0.00401560 6 0.737441 0.745066 -0.00762549 9.4477e-01 3.7542e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.92133 1.7907e-01 insignificant 1 1.0000000 insignificant -0.02886356 0.45692320 lowCoverage 1.00000 lowCoverage 0.781557 0.8441860 0.0039169 6 0.737441 0.7272266 0.01021411 4.3044e-01 6.9461e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4330e-01 9.2598e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.7974e-02 5.7972e-01 lowCoverage 1.0000e+00 lowCoverage 0.781557 0.7666214 0.0050903 6 0.737441 0.736787 0.00065348 8.8962e-01 5.5262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0153e-01 7.6489e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00361083 8.9352e-01 lowCoverage 1.00000000 lowCoverage 0.796235 0.8441860 0.0081372 6 0.745066 0.7272266 0.0178396 1.2204e-01 8.4062e-01 insignificant 8.1361e-01 1.0000e+00 insignificant 9.9049e-02 9.5431e-01 insignificant 7.7607e-01 1.000000 insignificant 0.0108900 7.5054e-01 lowCoverage 1.0000e+00 lowCoverage 0.796235 0.7666214 0.0067435 6 0.745066 0.736787 0.0082790 3.8209e-01 8.2673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4005e-01 9.5366e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0252527 3.9570e-01 lowCoverage 1.0000000 lowCoverage 0.8441860 0.7666214 -0.0022575 6 0.7272266 0.736787 -0.0095606 8.0175e-01 2.5568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6217e-01 3.6390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0143627 4.9001e-01 insignificant 1.0000e+00 insignificant chr22 27842469 27843469 155626 KREMEN1 ENSG00000183762 0.7356549 176 7 0.5556922 119 6 0.617216 82 7 0.8170575 161 7 0.7182540 66 7 0.695677 266 7 0.634650 80 7 0.648496 106 6 0.633056 59 6 0.716667 55 4 0.6656641 278 7 0.578571 31 3 0.6815803 79 7 0.714286 26 1 0.623651 94 7 0.633866 54 4 0.635317 42 4 0.5691127 147 7 0.6818681 103 7 0.703168 183 7 0.6768707 35 2 0.8569728 59 7 0.646586 91 7 0.785714 27 1 0.846154 65 6 0.693045 137 7 0.691558 68 6 0.7063492 22 1 0.625425 82 4 0.793962 152 7 0.6077316 132 7 0.766095 249 7 0.5987069 120 7 0.599024 103 7 0.6510073 120 7 0.809524 41 4 0.4051686 54 4 0.7120122 124 7 0.6771427 197 7 0.7539223 268 7 0.6575115 208 7 0.691730 194 7 0.657792 218 7 0.7964872 0.654219 0.655180 0.8502260 0.7750343 0.740936 0.701245 0.752870 0.696682 0.799383 0.7323697 0.689506 0.755687 0.734677 0.695844 0.694034 0.6841564 0.7068657 0.7395537 0.7561673 0.7284685 0.8806143 0.738384 0.800641 0.868471 0.724145 0.7613356 0.741427 0.710299 0.847900 0.6919544 0.811059 0.678517 0.613737 0.7179487 0.874486 0.510294 0.7472292 0.7643314 0.8052338 0.7346467 0.754471 0.736467 1 0.709751 0.751564 -0.04082178 7 0.592841 0.763227 -0.17038584 9.9926e-01 1.8803e-02 weaklyHypometh 1.000000 0.7861588 insignificant 0.99392 2.7449e-02 weaklyHypometh 1 1.0000000 insignificant -0.06173005 0.03999079 weaklyHypometh 1.00000 insignificant 0.710073 0.6797153 0.0353572 7 0.677533 0.6520377 0.02549527 6.6430e-02 7.9401e-01 insignificant 4.7791e-01 1.0000e+00 insignificant 2.5668e-01 9.0352e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.3735e-02 5.7751e-01 insignificant 1.0000e+00 insignificant 0.709560 0.7529954 -0.0201854 7 0.574273 0.688047 -0.11377381 8.6086e-01 2.2535e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5402e-01 2.2544e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02464441 3.0342e-01 insignificant 1.00000000 insignificant 0.751342 0.6797153 0.0748050 7 0.729402 0.6520377 0.0773648 4.4332e-03 9.9782e-01 weaklyHypermeth 4.0302e-02 1.0000e+00 weaklyHypermeth 3.9820e-02 9.9635e-01 weaklyHypermeth 3.5239e-01 1.000000 insignificant 0.0954648 1.5803e-01 insignificant 1.0000e+00 insignificant 0.751564 0.7534626 0.0292905 7 0.763227 0.735059 0.0281686 2.6122e-01 9.5463e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6449e-01 9.7597e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0370856 2.3562e-01 insignificant 1.0000000 insignificant 0.6797153 0.7532348 -0.0461559 7 0.6520377 0.697210 -0.0451721 8.8796e-01 5.7630e-02 insignificant 1.0000e+00 4.9256e-01 insignificant 8.6270e-01 9.5436e-02 insignificant 1.0000e+00 9.4491e-01 insignificant -0.0583792 3.5395e-01 insignificant 1.0000e+00 insignificant chr22 28976173 28977173 155689 LIF ENSG00000128342 0.7262787 133 6 0.5668772 280 7 0.616995 217 8 0.7063492 86 4 0.6509117 111 6 0.675936 174 8 0.696051 340 8 0.681580 246 8 0.749702 214 7 0.621413 175 8 0.7932102 230 8 0.714071 154 5 0.7266719 245 8 0.749373 48 4 0.554090 166 7 0.659524 128 6 0.776543 102 4 0.3903050 115 4 0.6995617 290 8 0.743410 169 8 0.7589286 101 8 0.6666667 28 2 0.685588 178 8 0.721497 88 8 0.537338 50 5 0.718538 288 8 0.592985 152 7 0.7416953 79 7 0.704691 227 8 0.705534 286 8 0.6367789 276 8 0.727076 160 8 0.2302141 252 8 0.247618 260 8 0.3464482 173 5 0.250000 10 0 0.3313898 119 7 0.2538426 339 8 0.6413547 163 6 0.6340643 137 8 0.5525573 83 5 0.612428 155 4 0.534323 101 6 0.7309581 0.621722 0.715504 0.8497403 0.7307360 0.755097 0.763808 0.702829 0.763699 0.675964 0.8040925 0.731284 0.712196 0.727138 0.657222 0.680202 0.7374133 0.5066132 0.6994551 0.7217551 0.7871560 0.6870360 0.767315 0.718417 0.589214 0.742347 0.5944149 0.773392 0.755237 0.702504 0.6562504 0.800991 0.361567 0.364183 0.3888758 0.408536 0.440235 0.4088030 0.6652299 0.6340715 0.6306840 0.676714 0.528139 1 0.698592 0.725562 -0.01173205 8 0.655811 0.673582 -0.01777014 9.3461e-01 2.6972e-01 insignificant 1.000000 1.0000000 insignificant 0.86947 6.4037e-01 insignificant 1 1.0000000 insignificant -0.00816708 0.77246598 insignificant 1.00000 insignificant 0.698592 0.3165655 0.4335321 8 0.655811 0.2476100 0.40820143 1.2159e-45 9.9997e-01 hypermethylated 4.0530e-43 1.0000e+00 hypermethylated 3.9649e-12 9.9993e-01 hypermethylated 3.3040e-10 1.00000000 hypermethylated 3.9836e-01 1.8447e-10 hypermethylated 4.6117e-08 hypermethylated 0.698592 0.6056338 0.0710440 6 0.655811 0.611005 0.04480687 2.6908e-03 9.5924e-01 weaklyHypermeth 5.5441e-02 1.0000e+00 weaklyHypermeth 8.9782e-02 9.8168e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.07999711 2.0207e-02 weaklyHypermeth 0.50661230 insignificant 0.725562 0.3165655 0.4371259 8 0.673582 0.2476100 0.4259716 2.6493e-39 1.0000e+00 hypermethylated 6.6231e-37 1.0000e+00 hypermethylated 1.5196e-10 9.9999e-01 hypermethylated 1.2663e-08 1.000000 hypermethylated 0.4065244 1.5832e-09 hypermethylated 3.9581e-07 hypermethylated 0.725562 0.6056338 0.0841123 6 0.673582 0.611005 0.0625770 1.6077e-03 9.8786e-01 weaklyHypermeth 3.6539e-02 1.0000e+00 weaklyHypermeth 1.8050e-01 9.8815e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0881642 1.1706e-02 weaklyHypermeth 0.5574420 insignificant 0.3165655 0.6056338 -0.2461853 6 0.2476100 0.611005 -0.3633946 9.9991e-01 3.9468e-10 hypomethylated 1.0000e+00 1.8794e-08 hypomethylated 9.9980e-01 1.6731e-04 hypomethylated 1.0000e+00 6.9714e-03 hypomethylated -0.3183602 2.6031e-06 hypomethylated 4.3385e-04 hypomethylated chr22 28982981 28983981 155691 LIF ENSG00000128342 0.7445205 207 14 0.4990704 478 14 0.731141 377 14 0.7735300 155 9 0.7515692 173 13 0.604777 271 14 0.594238 282 11 0.651987 353 14 0.610254 398 14 0.677258 320 14 0.7646346 357 14 0.685138 229 14 0.5772041 508 14 0.433866 137 7 0.550425 328 14 0.817026 221 12 0.417912 139 8 0.7797207 185 8 0.3776523 366 14 0.547136 294 14 0.6012865 139 9 0.7286860 154 7 0.682164 206 14 0.653524 144 9 0.719714 113 8 0.797214 512 14 0.636543 178 14 0.5945462 97 9 0.694279 427 14 0.544828 687 14 0.5729992 501 14 0.649269 254 14 0.7572778 447 14 0.795390 291 14 0.7175758 122 5 0.551020 48 4 0.6022817 152 10 0.7858152 406 14 0.8045918 102 13 0.8310802 192 14 0.7951887 152 9 0.754394 100 8 0.713816 127 9 0.7533426 0.499972 0.721467 0.7691241 0.7560897 0.665129 0.634199 0.637499 0.565561 0.773837 0.7505007 0.692883 0.553784 0.654899 0.613350 0.829350 0.3848514 0.7749834 0.4072566 0.5694372 0.6262512 0.7109478 0.726627 0.699584 0.716714 0.808147 0.6509622 0.558350 0.684579 0.525116 0.5914764 0.704402 0.772939 0.829008 0.6897027 0.596838 0.571968 0.8071546 0.8135799 0.8276019 0.8118237 0.780414 0.739446 1 0.676012 0.718099 -0.02528290 14 0.561106 0.576763 -0.01565692 9.9343e-01 9.4943e-02 insignificant 1.000000 1.0000000 insignificant 0.98504 5.6341e-01 insignificant 1 1.0000000 insignificant -0.02680134 0.46090624 insignificant 1.00000 insignificant 0.676252 0.7978142 -0.0731844 14 0.589577 0.7405220 -0.15094484 9.9989e-01 1.3501e-10 weaklyHypometh 1.0000e+00 3.3752e-08 weaklyHypometh 9.9695e-01 1.0682e-04 weaklyHypometh 1.0000e+00 0.02670408 weaklyHypometh -7.2107e-02 1.8443e-01 insignificant 1.0000e+00 insignificant 0.676838 0.7949480 -0.1596363 12 0.628882 0.800412 -0.17152953 1.0000e+00 3.8282e-10 weaklyHypometh 1.0000e+00 3.8282e-07 weaklyHypometh 9.9999e-01 6.8743e-07 weaklyHypometh 1.0000e+00 0.00068743 weaklyHypometh -0.15036117 4.4470e-04 weaklyHypometh 0.06352875 weaklyHypometh 0.718521 0.7967258 -0.0340889 14 0.640102 0.6969619 -0.0568604 9.9386e-01 7.3177e-06 weaklyHypometh 1.0000e+00 1.4635e-03 weaklyHypometh 9.6197e-01 7.6466e-03 weaklyHypometh 1.0000e+00 0.870656 insignificant -0.0453057 3.5998e-01 insignificant 1.0000e+00 insignificant 0.718860 0.7949480 -0.1529988 12 0.658782 0.800412 -0.1416301 9.9963e-01 3.4286e-08 weaklyHypometh 1.0000e+00 3.4286e-05 weaklyHypometh 9.9953e-01 1.4002e-05 weaklyHypometh 1.0000e+00 0.014002 weaklyHypometh -0.1235598 1.2346e-03 weaklyHypometh 0.1371760 insignificant 0.7979452 0.7949480 -0.0352077 12 0.7398902 0.800412 -0.0605217 5.8253e-01 4.2541e-02 weaklyHypometh 1.0000e+00 3.7647e-01 insignificant 9.6196e-01 3.2827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0782541 1.3407e-01 insignificant 1.0000e+00 insignificant chr22 29826233 29827233 155709 SMTN ENSG00000183963 0.9048455 405 5 0.7659390 201 7 0.707720 270 7 0.9075299 322 4 0.9050039 174 7 0.809649 442 6 0.751139 177 7 0.736269 239 7 0.842735 209 7 0.810900 266 7 0.8346874 301 7 0.841164 141 7 0.8231152 191 7 0.814610 146 4 0.872239 279 7 0.851190 116 6 0.775132 6414 7 0.7553537 555 4 0.9320201 389 7 0.782197 334 7 0.8847539 92 7 0.7767691 126 5 0.887477 176 7 0.738186 147 6 0.755908 303 4 0.947091 244 7 0.687420 320 6 0.7178257 148 6 0.879166 253 6 0.874044 249 7 0.8837649 192 7 0.868453 324 6 0.7843507 217 7 0.616000 234 7 0.8571429 183 6 0.838169 184 4 0.5680826 164 7 0.7841548 214 6 0.8888419 294 5 0.9108844 311 6 0.8365376 379 4 0.917924 577 4 0.837748 309 5 0.9289855 0.812549 0.762293 0.9228604 0.9456329 0.906058 0.898964 0.914059 0.887278 0.914917 0.8860821 0.911202 0.915422 0.885774 0.914167 0.849553 0.9811622 0.8921752 0.9263544 0.9221351 0.9751131 0.9405523 0.950928 0.874169 0.872763 0.929092 0.7867392 0.861907 0.901429 0.896576 0.8922089 0.896014 0.753208 0.585771 0.7344877 0.875777 0.789418 0.9055529 0.9544004 0.9402893 0.9536272 0.976771 0.941298 4 0.946850 0.864749 0.04839751 6 0.799231 0.724446 0.07478470 7.8992e-05 5.5162e-01 weaklyHypermeth 0.078992 1.0000000 weaklyHypermeth 0.67008 2.9204e-01 insignificant 1 1.0000000 insignificant -0.00389971 0.89103499 insignificant 1.00000 insignificant 0.946850 0.7851171 0.1250044 7 0.799231 0.6562739 0.14295725 6.9276e-07 9.6904e-01 weaklyHypermeth 1.0188e-05 1.0000e+00 weaklyHypermeth 1.2369e-01 9.7202e-01 insignificant 9.9752e-01 1.00000000 insignificant 7.9855e-02 1.6992e-01 insignificant 1.0000e+00 insignificant 0.946927 0.9556150 -0.0020812 4 0.841978 0.862523 -0.02054410 5.1630e-01 2.9061e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8457e-01 4.2826e-05 lowCoverage 1.0000e+00 0.02141298 lowCoverage -0.05721520 2.8992e-02 lowCoverage 0.65890661 lowCoverage 0.864749 0.7851171 0.0781579 6 0.724446 0.6562739 0.0681726 1.8248e-02 9.8510e-01 weaklyHypermeth 1.4716e-01 1.0000e+00 insignificant 1.1747e-01 9.9007e-01 insignificant 8.9669e-01 1.000000 insignificant 0.0837550 1.6686e-01 insignificant 1.0000e+00 insignificant 0.865086 0.9556150 -0.0648160 4 0.827939 0.862523 -0.0345838 9.8741e-01 5.6696e-04 lowCoverage 1.0000e+00 2.8348e-01 lowCoverage 9.9694e-01 4.2537e-03 lowCoverage 1.0000e+00 0.696372 lowCoverage -0.0533155 9.6110e-02 lowCoverage 1.0000000 lowCoverage 0.7857741 0.9556150 -0.1398575 4 0.7500273 0.862523 -0.1124952 9.8536e-01 5.8034e-03 lowCoverage 1.0000e+00 7.3461e-02 lowCoverage 9.8811e-01 8.8547e-04 lowCoverage 1.0000e+00 2.4596e-02 lowCoverage -0.1370705 3.7642e-02 lowCoverage 5.1023e-01 lowCoverage chr22 29938984 29939984 155713 LIMK2 ENSG00000182541 0.6643353 414 6 0.7472235 170 6 0.691408 146 6 0.7859950 198 6 0.6938492 118 6 0.712377 617 6 0.747101 129 6 0.675089 206 6 0.536145 176 6 0.640699 101 6 0.7456190 247 6 0.672768 93 6 0.7825244 172 6 0.875000 8 1 0.760856 135 6 0.677686 81 6 0.721077 91 6 0.7961243 178 6 0.6193065 171 6 0.756694 553 6 0.7272020 159 6 0.6549116 268 6 0.738425 297 6 0.694463 357 6 0.732906 103 6 0.798122 213 6 0.679087 381 6 0.6021608 142 6 0.703099 135 6 0.766325 201 6 0.6678571 198 6 0.678269 410 6 0.5984823 134 6 0.598101 144 6 0.7183860 189 6 0.732650 160 6 0.6139766 450 5 0.6566135 185 6 0.7470636 429 6 0.7254602 353 6 0.8531558 231 6 0.800298 274 6 0.741317 302 6 0.7520963 0.803907 0.785327 0.8669289 0.7732075 0.801412 0.801854 0.752509 0.680124 0.792428 0.8217444 0.728307 0.875275 NA 0.821407 0.793562 0.7716463 0.8827326 0.7685447 0.8444088 0.7995838 0.7341176 0.785004 0.784541 0.815028 0.872132 0.7520298 0.724003 0.790165 0.870133 0.7586443 0.774954 0.711068 0.708482 0.8054673 0.776482 0.727960 0.7581548 0.8230759 0.8115496 0.9175582 0.851617 0.845770 6 0.788711 0.767109 0.02247042 6 0.712136 0.694656 0.01748001 6.8034e-02 7.4243e-01 insignificant 1.000000 1.0000000 insignificant 0.19683 7.4022e-01 insignificant 1 1.0000000 insignificant 0.01152503 0.61225902 insignificant 1.00000 insignificant 0.788711 0.7353407 0.0468555 6 0.712136 0.6636172 0.04851828 8.5166e-03 9.9819e-01 weaklyHypermeth 7.0972e-02 1.0000e+00 weaklyHypermeth 2.9288e-02 9.9825e-01 weaklyHypermeth 2.9288e-01 1.00000000 insignificant 6.2059e-02 6.2625e-02 insignificant 6.3903e-01 insignificant 0.788711 0.8458150 -0.0405706 6 0.712136 0.763041 -0.05090567 9.9710e-01 2.2974e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9886e-01 6.0465e-03 weaklyHypometh 1.0000e+00 0.71827148 insignificant -0.05836493 7.5129e-02 insignificant 1.00000000 insignificant 0.767109 0.7353407 0.0242792 6 0.694656 0.6636172 0.0310383 7.9707e-02 9.8621e-01 insignificant 5.5352e-01 1.0000e+00 insignificant 1.3707e-01 9.9177e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0505340 1.1482e-01 insignificant 9.6485e-01 insignificant 0.767109 0.8458150 -0.0638375 6 0.694656 0.763041 -0.0683857 9.9994e-01 1.6531e-03 weaklyHypometh 1.0000e+00 3.1931e-01 insignificant 9.9997e-01 4.9910e-03 weaklyHypometh 1.0000e+00 0.696372 insignificant -0.0698900 3.9151e-02 weaklyHypometh 1.0000000 insignificant 0.7353407 0.8458150 -0.0887733 6 0.6636172 0.763041 -0.0994240 1.0000e+00 7.9885e-05 weaklyHypometh 1.0000e+00 1.8298e-03 weaklyHypometh 1.0000e+00 6.0248e-04 weaklyHypometh 1.0000e+00 1.7720e-02 weaklyHypometh -0.1204240 6.4037e-03 weaklyHypometh 1.5247e-01 insignificant chr22 30068923 30069923 155720 ENSG00000212542 0.1081794 186 5 0.0152299 150 5 0.106439 170 5 0.1252488 261 5 0.0867647 108 5 0.192872 383 5 0.124238 194 5 0.062733 198 5 0.050857 321 5 0.100675 262 5 0.1161704 176 5 0.119566 161 5 0.0358948 248 5 0.076557 145 5 0.076638 291 5 0.128273 115 5 0.060122 161 5 0.1629691 268 5 0.0217391 107 4 0.106992 325 5 0.0503968 99 5 0.0193062 172 5 0.194035 200 5 0.067323 122 5 0.031128 125 4 0.024159 255 5 0.092431 149 5 0.1285215 121 5 0.184743 159 5 0.091165 265 5 0.0386209 227 5 0.272537 289 5 0.3346594 130 5 0.255482 67 4 0.0000000 80 2 0.240000 28 3 0.4423300 130 5 0.0926294 155 5 0.0062500 256 5 0.0434680 229 5 0.0176136 137 4 0.121104 190 4 0.039971 191 5 0.0734688 0.013940 0.108931 0.0619240 0.0307152 0.130051 0.105691 0.050243 0.052708 0.072714 0.0989504 0.125418 0.034126 0.055446 0.041094 0.073314 0.0647372 0.1326357 0.0206174 0.0826937 0.0566558 0.0055327 0.154714 0.058398 0.032258 0.018557 0.0766991 0.088876 0.115002 0.054873 0.0250978 0.220081 0.263158 0.252704 0.0494166 0.218636 0.453002 0.0966199 0.0086648 0.0204053 0.0168846 0.038886 0.049879 4 0.079196 0.086578 -0.00610577 5 0.099536 0.108370 -0.00883470 8.4358e-01 4.4292e-01 insignificant 1.000000 1.0000000 insignificant 0.32715 8.4276e-01 insignificant 1 1.0000000 insignificant -0.00562265 0.82709050 lowCoverage 1.00000 lowCoverage 0.079196 0.2101695 -0.1313607 5 0.099536 0.2327816 -0.13324599 9.9959e-01 1.8755e-08 weaklyHypometh 1.0000e+00 3.7510e-06 weaklyHypometh 5.7382e-01 7.5225e-03 weaklyHypometh 1.0000e+00 0.83582914 insignificant -1.3361e-01 9.7093e-02 lowCoverage 8.8266e-01 lowCoverage 0.079196 0.0249252 0.0492797 4 0.099536 0.036276 0.06325912 9.3217e-05 9.9999e-01 lowCoverage 2.9130e-03 1.0000e+00 lowCoverage 8.3269e-04 9.9995e-01 lowCoverage 2.9739e-02 1.00000000 lowCoverage 0.04822674 7.4175e-02 lowCoverage 1.00000000 lowCoverage 0.086578 0.2101695 -0.1266844 5 0.108370 0.2327816 -0.1244113 9.9399e-01 1.1936e-04 weaklyHypometh 1.0000e+00 1.7051e-02 weaklyHypometh 8.0536e-01 2.2684e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.1279863 1.1262e-01 lowCoverage 9.6260e-01 lowCoverage 0.086578 0.0249252 0.0540347 4 0.108370 0.036276 0.0720938 5.4745e-03 9.9977e-01 lowCoverage 1.1405e-01 1.0000e+00 lowCoverage 1.1323e-02 9.9771e-01 lowCoverage 2.8309e-01 1.000000 lowCoverage 0.0538494 1.0240e-01 lowCoverage 1.0000000 lowCoverage 0.2101695 0.0249252 0.1824546 4 0.2327816 0.036276 0.1965051 1.3654e-04 9.9994e-01 lowCoverage 1.2413e-02 1.0000e+00 lowCoverage 1.5271e-02 9.7356e-01 lowCoverage 8.4839e-01 1.0000e+00 lowCoverage 0.1818357 3.8217e-02 lowCoverage 5.1023e-01 lowCoverage chr22 30069494 30070494 155721 ENSG00000212542 0.2143838 98 3 0.1441794 127 5 0.232970 175 5 0.4878788 72 3 0.1781038 153 5 0.334564 166 4 0.251463 171 5 0.150907 153 5 0.164815 229 5 0.218871 175 5 0.2840242 133 5 0.161583 184 5 0.1380077 185 5 0.133929 22 2 0.208211 167 5 0.224167 107 5 0.128702 206 5 0.2742022 87 4 0.0480769 118 4 0.297395 156 5 0.1828283 53 5 0.1718600 87 3 0.327682 110 4 0.218415 71 3 0.183333 29 2 0.090580 182 5 0.130000 88 5 0.2854977 81 5 0.226905 141 5 0.199376 191 5 0.1056190 186 5 0.423170 171 5 0.3375290 175 5 0.123607 111 4 0.5600000 53 3 0.068571 18 2 0.4261183 64 5 0.1450337 118 5 0.1470588 96 3 0.1403361 108 4 0.2937500 56 2 0.243479 74 2 0.189000 78 3 0.2483313 0.229219 0.342398 0.2408349 0.2047428 0.400761 0.298755 0.218148 0.280849 0.317986 0.3476792 0.218371 0.214305 0.309774 0.266146 0.275670 0.2312531 0.3244282 0.0820317 0.3250270 0.2555273 0.2243057 0.371830 0.396996 0.203817 0.130442 0.1725524 0.322823 0.257726 0.267629 0.1286165 0.470535 0.478876 0.216916 0.3566434 0.163237 0.526660 0.1981291 0.2056767 0.2063819 0.2232018 0.209725 0.335839 2 0.158114 0.212950 -0.01429207 5 0.201090 0.216510 -0.01541944 9.5598e-01 2.6668e-01 insignificant 1.000000 1.0000000 insignificant 0.76603 5.2964e-01 insignificant 1 1.0000000 insignificant 0.00171607 0.96094759 lowCoverage 1.00000 lowCoverage 0.158114 0.2968460 -0.1161282 5 0.201090 0.3004651 -0.09937481 9.3020e-01 2.8834e-07 weaklyHypometh 1.0000e+00 4.1191e-05 weaklyHypometh 7.5422e-01 2.8763e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -6.2988e-02 4.7501e-01 lowCoverage 1.0000e+00 lowCoverage 0.158114 0.2160194 0.0505279 2 0.201090 0.141072 0.06001781 1.5094e-03 9.9922e-01 lowCoverage 3.2812e-02 1.0000e+00 lowCoverage 1.9166e-03 9.9890e-01 lowCoverage 5.1800e-02 1.00000000 lowCoverage 0.01109675 7.6561e-01 lowCoverage 1.00000000 lowCoverage 0.212950 0.2968460 -0.0931944 5 0.216510 0.3004651 -0.0839554 9.2158e-01 9.4127e-04 weaklyHypometh 1.0000e+00 1.1766e-01 insignificant 8.0284e-01 1.3657e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0647043 4.7075e-01 lowCoverage 1.0000e+00 lowCoverage 0.212950 0.2160194 0.0617928 2 0.216510 0.141072 0.0754372 4.1927e-03 9.9901e-01 lowCoverage 8.9207e-02 1.0000e+00 lowCoverage 2.6784e-03 9.9318e-01 lowCoverage 8.1163e-02 1.000000 lowCoverage 0.0093807 8.1958e-01 lowCoverage 1.0000000 lowCoverage 0.2968460 0.2160194 0.1110380 2 0.3004651 0.141072 0.1593926 2.0175e-03 9.8514e-01 lowCoverage 1.1209e-01 1.0000e+00 lowCoverage 1.0673e-02 9.6088e-01 lowCoverage 7.1156e-01 1.0000e+00 lowCoverage 0.0740850 4.1472e-01 lowCoverage 1.0000e+00 lowCoverage chr22 31682965 31683965 155761 ENSG00000183531 0.7587302 55 2 0.7186357 187 6 0.790981 104 6 0.8425568 60 4 0.8750000 32 4 0.968750 118 4 0.965278 55 4 0.890000 55 4 0.975000 25 4 1.000000 16 0 0.8979489 186 4 0.964286 22 3 0.9230769 14 1 0.858333 22 3 0.961538 19 1 1.000000 8 0 NA 0 0 0.5069444 19 1 0.9687500 11 1 0.993750 50 4 0.9000000 32 4 1.0000000 6 0 0.782053 69 5 0.937500 13 1 1.000000 2 0 0.900658 218 6 0.811364 39 4 1.0000000 19 2 0.980769 22 1 0.866898 190 6 0.9187666 162 6 0.913889 82 4 0.2577392 272 6 0.356845 68 4 0.8095238 148 4 0.000000 5 0 0.3373234 97 4 0.1149244 291 6 0.5846774 80 4 0.5212142 149 4 0.4787353 76 4 0.520833 18 1 0.638474 160 4 0.8184524 0.724626 0.871032 0.9131274 0.8750000 0.992188 0.977431 0.862500 0.968750 1.000000 0.8849361 0.955357 0.922948 0.822917 0.951923 1.000000 NA 0.9032880 0.9609375 0.9902344 0.9166667 0.9784011 0.856975 0.921875 0.957761 0.895995 0.7642045 1.000000 0.975962 0.835156 0.8704147 0.916667 0.239712 0.374628 0.6428571 0.197818 0.489624 0.1190985 0.5641801 0.3642958 0.3738192 0.669791 0.633437 0 0.870265 0.906323 -0.03203951 4 0.821067 0.894825 -0.07375845 7.4920e-01 1.8626e-02 lowCoverage 1.000000 0.7861588 lowCoverage 0.83729 4.8585e-02 lowCoverage 1 1.0000000 lowCoverage -0.03031291 0.39843516 lowCoverage 1.00000 lowCoverage 0.870510 0.3943182 0.4466258 4 0.846628 0.2658456 0.58078289 8.2241e-24 1.0000e+00 lowCoverage 4.3285e-22 1.0000e+00 lowCoverage 2.7864e-08 9.9999e-01 lowCoverage 1.3932e-06 1.00000000 lowCoverage 5.7462e-01 3.2395e-03 lowCoverage 6.8927e-02 lowCoverage 0.870510 0.5797101 0.3031151 4 0.846628 0.493473 0.35315573 2.3449e-15 9.8532e-01 lowCoverage 3.9081e-13 1.0000e+00 lowCoverage 4.6999e-07 9.9439e-01 lowCoverage 5.9975e-05 1.00000000 lowCoverage 0.33855834 1.0022e-06 lowCoverage 0.00047074 lowCoverage 0.906323 0.3947668 0.4724365 6 0.894825 0.3101532 0.5846718 3.3603e-20 1.0000e+00 hypermethylated 1.6802e-18 1.0000e+00 hypermethylated 2.6631e-07 1.0000e+00 hypermethylated 1.0243e-05 1.000000 hypermethylated 0.6049321 2.8014e-03 lowCoverage 6.3668e-02 lowCoverage 0.906323 0.5809129 0.3163945 4 0.894825 0.575718 0.3191068 5.6019e-14 9.9992e-01 lowCoverage 1.1204e-11 1.0000e+00 lowCoverage 1.0086e-06 9.9881e-01 lowCoverage 2.0171e-04 1.000000 lowCoverage 0.3688712 3.0665e-06 lowCoverage 0.0030665 lowCoverage 0.3943182 0.5797101 -0.1289542 4 0.2658456 0.493473 -0.2276272 9.9976e-01 6.3656e-03 lowCoverage 1.0000e+00 7.9570e-02 lowCoverage 9.9957e-01 8.4082e-02 lowCoverage 1.0000e+00 8.5798e-01 lowCoverage -0.2360609 9.4292e-02 lowCoverage 9.0010e-01 lowCoverage chr22 31719642 31720642 155766 ENSG00000183531 0.6639385 139 5 0.6991508 189 5 0.820096 135 5 0.8601814 174 5 0.8818182 51 5 0.809048 195 5 0.887273 54 5 0.882827 154 5 0.747368 75 5 0.894587 114 5 0.7586512 280 5 0.900000 26 4 0.8232564 105 5 0.855939 121 5 0.770715 169 5 0.800000 21 4 0.000000 4 0 0.5511484 132 5 0.7794261 368 5 0.807750 118 5 0.8085410 81 5 0.2212403 95 5 0.825871 107 5 0.637882 59 5 0.670455 49 5 0.832565 257 5 0.802753 147 5 0.9833333 35 5 0.843791 240 5 0.901205 292 5 0.6948280 226 5 0.890351 201 5 0.9170899 132 5 0.860000 121 5 1.0000000 55 1 0.833333 14 0 0.8195687 103 5 0.7634049 223 5 0.1194821 173 5 0.4923687 115 5 0.2427889 129 5 0.217273 55 5 0.280255 108 5 0.7962637 0.700808 0.818661 0.8596825 0.8894702 0.808851 0.888685 0.882694 0.749337 0.894771 0.9105282 0.906475 0.822492 0.856042 0.772697 0.812950 0.1449703 0.5481298 0.7799180 0.8110114 0.9327770 0.2641120 0.826198 0.773451 0.670471 0.832219 0.7623965 0.984412 0.811410 0.886699 0.6977776 0.895134 0.913380 0.856886 NA 0.832134 0.886335 0.9158157 0.1205355 0.3909136 0.2493958 0.217430 0.283446 5 0.806784 0.791597 0.01199664 5 0.671385 0.768212 -0.09682718 5.2785e-01 6.2035e-01 insignificant 1.000000 1.0000000 insignificant 0.71941 6.3721e-01 insignificant 1 1.0000000 insignificant 0.00025741 0.99718155 lowCoverage 1.00000 lowCoverage 0.806784 0.8981481 -0.0916866 5 0.671385 0.8061377 -0.13475245 9.9994e-01 3.1597e-04 weaklyHypometh 1.0000e+00 2.4305e-02 weaklyHypometh 9.9787e-01 5.5491e-03 weaklyHypometh 1.0000e+00 0.69363761 insignificant -1.0591e-01 7.2049e-02 lowCoverage 7.1336e-01 lowCoverage 0.807399 0.2452504 0.5626596 5 0.805662 0.238293 0.56736923 4.8901e-40 1.0000e+00 hypermethylated 2.4450e-37 1.0000e+00 hypermethylated 1.6767e-10 1.0000e+00 hypermethylated 5.5890e-08 1.00000000 hypermethylated 0.48922530 1.3368e-04 lowCoverage 0.02228071 lowCoverage 0.791597 0.8981481 -0.1134910 5 0.768212 0.8061377 -0.0379253 9.8204e-01 6.0439e-03 weaklyHypometh 1.0000e+00 4.9976e-01 insignificant 9.7514e-01 3.8209e-03 weaklyHypometh 1.0000e+00 0.609738 insignificant -0.1061648 1.2786e-01 lowCoverage 1.0000e+00 lowCoverage 0.791153 0.2465517 0.5494804 5 0.740435 0.365244 0.3751904 1.4841e-21 9.9684e-01 hypermethylated 7.4205e-19 1.0000e+00 hypermethylated 1.6112e-10 9.9912e-01 hypermethylated 5.3708e-08 1.000000 hypermethylated 0.4889679 1.1878e-04 hypermethylated 0.0237554 hypermethylated 0.9007752 0.2452504 0.6522348 5 0.9006986 0.238293 0.6624055 1.2508e-23 1.0000e+00 hypermethylated 1.2508e-20 1.0000e+00 hypermethylated 5.3634e-08 1.0000e+00 hypermethylated 5.3634e-05 1.0000e+00 hypermethylated 0.5951327 1.1121e-04 lowCoverage 6.5415e-03 lowCoverage chr22 32580071 32581071 155794 ENSG00000209422 0.6874057 169 5 0.8516372 412 5 0.674435 87 5 0.7832711 178 5 0.8095238 82 5 0.761588 297 5 0.702969 126 5 0.850078 125 5 0.748319 63 5 0.834921 53 5 0.8199393 267 5 0.776471 33 3 0.7728193 121 5 0.819048 88 5 0.859333 94 5 0.866667 29 5 1.000000 6 0 0.4987352 187 5 0.7112232 245 5 0.902329 191 5 0.6247024 78 3 0.7607143 46 3 0.773103 78 5 0.805000 51 5 0.914773 39 3 0.766306 352 5 0.675560 115 3 0.8717949 38 3 0.807608 198 5 0.851658 608 5 0.8260345 372 5 0.810018 248 5 0.6392608 169 5 0.696071 81 5 0.8210526 194 5 0.900000 10 0 0.7481776 112 5 0.8126432 281 5 0.7823612 202 5 0.7920421 188 5 0.8054571 156 5 0.786884 87 5 0.741170 217 5 0.8665758 0.897262 0.755200 0.8938155 0.9277733 0.896135 0.799461 0.947288 0.798214 0.931808 0.8891345 0.926388 0.916656 0.915204 0.922402 0.970205 0.9290552 0.8818164 0.8918100 0.9586212 0.8999638 0.9019354 0.887690 0.958939 0.872710 0.902007 0.7806679 0.883971 0.890945 0.936162 0.8960635 0.915791 0.769133 0.904020 0.9605998 0.972067 0.898609 0.9442975 0.8858502 0.9123041 0.9131213 0.898312 0.837757 3 0.874079 0.910931 -0.00910356 5 0.742327 0.662552 0.07977423 8.1105e-01 4.5231e-01 insignificant 1.000000 1.0000000 insignificant 0.79122 6.5341e-01 insignificant 1 1.0000000 insignificant -0.00407041 0.90190755 lowCoverage 1.00000 lowCoverage 0.874342 0.8772137 -0.0038689 5 0.790792 0.7622637 0.02852833 2.5948e-01 2.3375e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9941e-01 1.2933e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7001e-02 7.1375e-01 lowCoverage 1.0000e+00 lowCoverage 0.874342 0.8305882 0.0070042 5 0.790792 0.778956 0.01183568 1.4497e-01 3.2248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1713e-01 5.2096e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00495270 8.4821e-01 lowCoverage 1.00000000 lowCoverage 0.911341 0.8772137 -0.0021704 5 0.795063 0.7622637 0.0327992 2.8593e-01 6.1564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2792e-01 2.9527e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0210717 6.5002e-01 lowCoverage 1.0000e+00 lowCoverage 0.911341 0.8305882 0.0120749 5 0.795063 0.778956 0.0161066 1.6458e-01 5.7928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6168e-01 8.0932e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0090231 7.2862e-01 lowCoverage 1.0000000 lowCoverage 0.8772137 0.8305882 0.0085349 5 0.7622637 0.778956 -0.0166926 4.8425e-01 3.4444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1532e-01 3.0911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0120486 7.7350e-01 lowCoverage 1.0000e+00 lowCoverage chr22 35051598 35052598 155901 APOL1 ENSG00000100342 0.8148522 164 6 0.8168670 104 6 0.809253 76 5 0.8328665 186 6 0.8095238 13 1 0.858770 284 6 0.753205 58 4 0.828571 91 6 0.955808 59 5 1.000000 45 6 0.9251925 225 6 0.765079 39 5 0.8035920 164 6 0.500000 2 0 0.774026 61 6 0.950000 20 4 0.966667 19 1 0.7774233 204 6 0.8207825 103 6 0.934979 192 6 0.9376263 63 5 0.9339827 62 6 0.758052 118 6 0.619048 26 3 0.738636 73 6 0.966346 74 6 0.838488 84 6 0.7275132 32 3 0.802721 85 6 0.946581 135 6 0.8474905 113 6 0.952164 296 6 0.8977025 65 6 0.694424 131 6 0.7142857 25 1 0.870370 52 6 0.7246914 77 6 0.9574275 130 6 0.8220191 240 4 0.9581448 239 6 0.9779225 229 6 0.773311 236 4 0.831448 200 6 0.9448789 0.924077 0.946453 0.9814485 0.9758302 0.924137 0.914225 0.982828 0.940618 1.000000 0.9352534 0.860221 0.946646 NA 0.934435 0.941708 0.9494949 0.9281141 0.9528441 0.9319904 0.9221763 0.9073200 0.888200 0.521789 0.984389 0.960373 0.8534088 0.823473 0.947523 0.940624 0.9788376 0.958169 0.891620 0.870432 0.8372102 0.874299 0.954770 0.9468599 0.9254357 0.9535856 0.9739014 0.936589 0.965641 0 0.930773 0.924675 0.00702305 6 0.781463 0.822082 -0.04061869 2.7154e-01 6.1042e-01 insignificant 1.000000 1.0000000 insignificant 0.11936 7.3681e-01 insignificant 1 1.0000000 insignificant -0.00418118 0.91865520 lowCoverage 1.00000 lowCoverage 0.930773 0.8580376 0.0545313 6 0.781463 0.7870102 -0.00554677 9.6664e-02 8.3408e-01 insignificant 6.6665e-01 1.0000e+00 insignificant 4.8152e-01 6.5428e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.5056e-02 6.4177e-01 lowCoverage 1.0000e+00 lowCoverage 0.931559 0.9632867 -0.0149433 6 0.807387 0.818029 -0.01064228 9.0480e-01 3.1482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3147e-01 9.2273e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03769615 4.4898e-01 lowCoverage 1.00000000 lowCoverage 0.923941 0.8562500 0.0541448 6 0.786295 0.6995646 0.0867306 2.2077e-01 9.0353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4027e-01 5.6688e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0292372 6.1322e-01 insignificant 1.0000e+00 insignificant 0.924545 0.9632867 -0.0253393 6 0.796665 0.818029 -0.0213638 9.8564e-01 3.5083e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1542e-01 7.6938e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0335150 5.3234e-01 insignificant 1.0000000 insignificant 0.8571429 0.9632867 -0.0593395 6 0.7565831 0.818029 -0.0614460 9.7576e-01 2.2328e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9264e-01 7.5659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0627522 3.3051e-01 insignificant 1.0000e+00 insignificant chr22 35111775 35112775 155905 MYH9 ENSG00000100345 0.1311802 170 8 0.0446742 303 9 0.064284 301 9 0.0650794 53 3 0.0456349 174 9 0.116719 248 9 0.056865 409 9 0.030919 248 9 0.062299 305 9 0.031884 236 9 0.0614442 411 9 0.056987 316 9 0.0301859 357 9 NA 0 0 0.032214 346 9 0.073812 293 9 0.041858 332 9 0.0340909 109 9 0.0037037 206 9 0.064893 325 9 0.0061728 102 9 0.0074074 70 6 0.095283 275 9 0.071155 136 9 0.067901 39 3 0.033109 352 9 0.045375 129 9 0.0895933 111 8 0.063590 226 9 0.074076 420 9 0.0274347 460 9 0.136050 366 9 0.0000000 235 9 0.038021 191 9 0.0000000 161 8 0.000000 55 6 0.0074074 83 8 0.0000000 293 9 0.0397707 185 9 0.0055556 231 9 0.0076628 95 6 0.038183 149 6 0.061260 98 6 0.1272583 0.047874 0.067937 0.0830142 0.0523441 0.113451 0.063327 0.033812 0.068940 0.031602 0.0692682 0.059262 0.034311 NA 0.028256 0.078151 0.0412671 0.0404952 0.0017182 0.0788362 0.0097365 0.0116838 0.091288 0.084697 0.045246 0.042801 0.0657328 0.094194 0.062788 0.085860 0.0349132 0.154031 0.000000 0.037623 0.0000000 0.000000 0.015120 0.0000000 0.0365816 0.0087629 0.0120867 0.041518 0.092744 6 0.051147 0.067014 -0.01646504 9 0.054246 0.064291 -0.01004574 7.4680e-01 1.0034e-01 insignificant 1.000000 1.0000000 insignificant 0.21615 8.9799e-01 insignificant 1 1.0000000 insignificant -0.00456616 0.72828364 insignificant 1.00000 insignificant 0.051147 0.0049116 0.0491270 9 0.054246 0.0048643 0.04938146 1.1347e-08 9.9998e-01 weaklyHypermeth 1.9232e-07 1.0000e+00 weaklyHypermeth 1.7979e-07 1.0000e+00 weaklyHypermeth 6.1997e-06 1.00000000 weaklyHypermeth 4.7625e-02 7.4149e-05 weaklyHypermeth 4.3617e-03 weaklyHypermeth 0.051147 0.0329815 0.0206636 8 0.054246 0.027584 0.02666137 3.0956e-03 9.8837e-01 weaklyHypermeth 6.0697e-02 1.0000e+00 weaklyHypermeth 6.6821e-03 9.9967e-01 weaklyHypermeth 1.5187e-01 1.00000000 insignificant 0.02470966 8.6545e-02 insignificant 1.00000000 insignificant 0.067014 0.0049116 0.0674878 9 0.064291 0.0048643 0.0594272 1.0319e-06 9.9984e-01 weaklyHypermeth 1.6644e-05 1.0000e+00 weaklyHypermeth 4.8107e-05 9.9994e-01 weaklyHypermeth 1.2027e-03 1.000000 weaklyHypermeth 0.0521909 8.1654e-04 weaklyHypermeth 2.3330e-02 weaklyHypermeth 0.067014 0.0329815 0.0399239 8 0.064291 0.027584 0.0367071 1.0801e-02 9.9820e-01 weaklyHypermeth 1.9287e-01 1.0000e+00 insignificant 1.1703e-01 9.9863e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0292758 7.8716e-02 insignificant 1.0000000 insignificant 0.0049116 0.0329815 -0.0300068 8 0.0048643 0.027584 -0.0227201 9.9590e-01 3.3846e-03 weaklyHypometh 1.0000e+00 4.9053e-02 weaklyHypometh 9.9898e-01 2.2215e-02 weaklyHypometh 1.0000e+00 3.3659e-01 insignificant -0.0229151 1.0631e-01 insignificant 9.8435e-01 insignificant chr22 35786687 35787687 155919 ENSG00000201078 0.8905255 532 12 0.6966066 570 12 0.671722 577 13 0.9094551 414 9 0.8568209 276 12 0.776158 608 11 0.764266 371 12 0.833821 412 11 0.802011 388 12 0.890652 372 12 0.8397519 618 12 0.849183 235 12 0.8314106 474 12 0.793387 148 6 0.817642 359 12 0.757332 146 8 0.693024 1451 6 0.8461045 597 9 0.8229677 668 12 0.764985 567 11 0.8147785 219 12 0.8211400 208 6 0.683916 384 12 0.888630 225 11 0.900040 346 5 0.829505 695 12 0.811117 425 11 0.7313092 193 10 0.819063 552 11 0.711539 663 12 0.7825414 735 13 0.885985 583 11 0.7502565 612 13 0.664506 526 12 0.8513762 644 13 0.799199 196 6 0.6074834 252 11 0.8409547 710 12 0.8499881 477 9 0.8579710 586 9 0.7461699 440 8 0.728156 681 8 0.737684 402 9 0.8513807 0.735172 0.800674 0.8731113 0.8709089 0.809174 0.815088 0.830426 0.832571 0.906309 0.8719812 0.800839 0.810904 0.890422 0.832433 0.699976 0.5842332 0.8241039 0.8360618 0.8612383 0.8778170 0.7663942 0.812764 0.815377 0.847084 0.866997 0.8047253 0.897164 0.865716 0.880260 0.8058447 0.887293 0.766050 0.731970 0.8733771 0.830297 0.831330 0.8233590 0.8106118 0.8107592 0.8215775 0.778502 0.778802 8 0.821297 0.850803 -0.02575943 11 0.656532 0.684968 -0.02843664 9.9743e-01 3.1431e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.99253 2.3679e-01 insignificant 1 1.0000000 insignificant -0.00123904 0.96082411 insignificant 1.00000 insignificant 0.821111 0.7959184 0.0320687 12 0.621444 0.6448242 -0.02338012 2.4541e-02 1.6863e-03 weaklyHypermeth 1.9173e-01 1.2045e-01 insignificant 5.6821e-01 4.4759e-02 inconclusive 1.0000e+00 1.00000000 insignificant 5.3095e-02 2.5899e-01 insignificant 1.0000e+00 insignificant 0.821644 0.8116054 0.0106344 9 0.771960 0.738237 0.03372244 1.6697e-02 8.7141e-01 weaklyHypermeth 2.7176e-01 1.0000e+00 insignificant 1.5970e-01 6.9030e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02139755 5.3163e-01 insignificant 1.00000000 insignificant 0.851100 0.7961892 0.0573038 12 0.704504 0.6806477 0.0238560 4.7770e-02 1.1224e-01 weaklyHypermeth 3.3879e-01 1.0000e+00 insignificant 6.0349e-01 2.1104e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0543342 2.6313e-01 insignificant 1.0000e+00 insignificant 0.852236 0.8116054 0.0472872 9 0.792695 0.738237 0.0544579 5.4885e-04 9.9841e-01 weaklyHypermeth 1.5246e-02 1.0000e+00 weaklyHypermeth 3.2080e-02 8.2582e-01 weaklyHypermeth 6.8255e-01 1.000000 insignificant 0.0226366 5.3610e-01 insignificant 1.0000000 insignificant 0.7967951 0.8116054 -0.0174116 9 0.7322614 0.738237 -0.0059760 4.3484e-04 6.8471e-01 inconclusive 3.1060e-02 1.0000e+00 inconclusive 5.2366e-02 6.9657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0316976 5.3817e-01 insignificant 1.0000e+00 insignificant chr22 36072042 36073042 155923 CYTH4 ENSG00000100055 0.8847491 204 6 0.7177775 187 6 0.598748 74 4 0.8678424 217 6 0.8314815 49 4 0.858661 230 6 0.791002 79 4 0.845824 85 6 0.929630 48 4 0.857402 42 4 0.9489967 241 6 0.812500 12 1 0.9450230 94 4 0.956522 24 1 0.765603 74 4 0.833333 9 1 1.000000 2 0 0.6544619 199 6 0.9590201 131 6 0.845895 160 6 0.7890086 92 6 0.8509768 78 4 0.930362 95 6 0.746212 59 4 0.764326 111 6 0.894111 144 6 0.730432 111 4 0.7400000 34 2 0.857672 124 5 0.941500 161 6 0.8906931 172 6 0.939304 222 6 0.0357143 189 6 0.051015 109 6 0.0000000 129 4 0.069298 156 6 0.1748016 146 5 0.0486111 266 6 0.7316532 173 6 0.8250794 180 6 0.7638116 244 6 0.694628 72 4 0.623120 194 6 0.8788417 0.712485 0.642659 0.8645737 0.8762781 0.916832 0.809207 0.834359 0.899932 0.797082 0.9600884 0.621166 0.908666 0.921686 0.661315 0.944263 0.9756903 0.5762562 0.9054136 0.9065502 0.8787101 0.6792175 0.947135 0.797407 0.875548 0.811294 0.8425224 0.901227 0.718405 0.852443 0.8980074 0.913544 0.021034 0.028158 0.0000000 0.037746 0.022845 0.0286299 0.7552794 0.8159100 0.7249080 0.721902 0.562729 1 0.823230 0.855207 -0.02855293 6 0.787644 0.789346 -0.00170255 9.4135e-01 1.0145e-01 insignificant 1.000000 1.0000000 insignificant 0.87664 4.3529e-01 insignificant 1 1.0000000 insignificant 0.00567369 0.86491754 lowCoverage 1.00000 lowCoverage 0.823230 0.0261569 0.7969887 6 0.787644 0.0370187 0.75062492 1.1491e-61 1.0000e+00 hypermethylated 1.1491e-58 1.0000e+00 hypermethylated 4.1723e-15 1.0000e+00 hypermethylated 1.2136e-12 1.00000000 hypermethylated 7.8198e-01 3.2975e-13 lowCoverage 1.6487e-10 lowCoverage 0.823230 0.7079954 0.1058808 6 0.787644 0.631191 0.15645276 2.7030e-04 9.9998e-01 weaklyHypermeth 7.1132e-03 1.0000e+00 weaklyHypermeth 1.6990e-03 9.9996e-01 weaklyHypermeth 5.1180e-02 1.00000000 weaklyHypermeth 0.11756519 2.0156e-02 lowCoverage 0.50661230 lowCoverage 0.855207 0.0261569 0.8250392 6 0.789346 0.0370187 0.7523275 5.7761e-59 1.0000e+00 hypermethylated 5.7761e-56 1.0000e+00 hypermethylated 2.9256e-13 1.0000e+00 hypermethylated 5.8512e-11 1.000000 hypermethylated 0.7763098 3.4221e-12 hypermethylated 3.4221e-09 hypermethylated 0.855207 0.7079954 0.1374596 6 0.789346 0.631191 0.1581553 3.4956e-07 1.0000e+00 weaklyHypermeth 1.8788e-05 1.0000e+00 weaklyHypermeth 1.3104e-04 1.0000e+00 weaklyHypermeth 6.6732e-03 1.000000 weaklyHypermeth 0.1118915 2.6003e-02 weaklyHypermeth 0.8101333 insignificant 0.0261569 0.7079954 -0.6826436 6 0.0370187 0.631191 -0.5941722 1.0000e+00 1.6343e-31 hypomethylated 1.0000e+00 1.6343e-28 hypomethylated 1.0000e+00 4.3187e-09 hypomethylated 1.0000e+00 1.0797e-06 hypomethylated -0.6644183 4.1857e-07 hypomethylated 1.3952e-04 hypomethylated chr22 36110401 36111401 155926 ELFN2 ENSG00000166897 0.7683684 230 6 0.5760520 181 5 0.945456 97 5 0.8918942 220 6 0.8618421 77 5 0.948427 395 6 0.844742 62 5 0.850478 116 6 0.907003 88 5 0.949279 141 5 0.9110664 225 6 0.750812 41 5 0.9843074 102 5 0.955214 105 5 0.895179 155 5 0.952381 13 2 NA 0 0 0.9499785 419 6 0.9204655 350 6 0.916412 290 5 0.9666667 74 5 0.9639706 52 3 0.841003 130 5 0.990783 67 3 0.944444 47 6 0.918417 222 5 0.892643 185 6 0.7191043 45 5 0.930280 266 6 0.707444 213 5 0.9734910 223 5 0.904390 304 5 0.8431644 120 6 0.800785 349 6 0.8083117 247 6 0.900000 18 0 0.5989230 113 6 0.8069720 347 6 0.8083420 200 6 0.9666737 258 6 0.9609059 184 5 0.981818 165 5 0.940631 164 6 0.8713244 0.780138 0.928969 0.8868393 0.9682342 0.940410 0.854818 0.951021 0.893767 0.939018 0.8945817 0.639361 0.979617 0.939924 0.928105 0.926535 NA 0.9091700 0.9311345 0.8995912 0.9621302 0.9523271 0.862773 0.980531 0.899408 0.934178 0.9014686 0.812752 0.917378 0.929875 0.9544160 0.889849 0.905535 0.765653 0.6542674 0.916061 0.786350 0.9583091 0.9242021 0.9543388 0.9508213 0.967079 0.928294 5 0.905843 0.910832 -0.00878540 5 0.799253 0.731329 0.06792415 9.2892e-01 8.6952e-01 insignificant 1.000000 1.0000000 insignificant 0.98632 7.2407e-01 insignificant 1 1.0000000 insignificant -0.01292892 0.71691176 lowCoverage 1.00000 lowCoverage 0.905324 0.8308208 0.0815061 5 0.756897 0.6044253 0.15247137 1.3126e-02 9.6146e-01 weaklyHypermeth 1.0775e-01 1.0000e+00 insignificant 2.9770e-01 9.5254e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.0098e-02 9.2639e-02 lowCoverage 8.6596e-01 lowCoverage 0.906335 0.9433574 -0.0359391 5 0.927504 0.929722 -0.00221793 9.7435e-01 7.0215e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3354e-01 1.6080e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04854989 2.4179e-01 lowCoverage 1.00000000 lowCoverage 0.910832 0.8329135 0.0995294 5 0.731329 0.6648678 0.0664610 1.3059e-01 9.8792e-01 insignificant 8.6482e-01 1.0000e+00 insignificant 2.9491e-01 9.9000e-01 insignificant 1.0000e+00 1.000000 insignificant 0.1030271 6.7279e-02 lowCoverage 6.4691e-01 lowCoverage 0.911781 0.9433574 -0.0287930 5 0.901898 0.929722 -0.0278239 9.7925e-01 1.8492e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1663e-01 6.5157e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0356210 4.1292e-01 lowCoverage 1.0000000 lowCoverage 0.8341751 0.9433574 -0.1118937 6 0.8069540 0.929722 -0.1227682 9.2479e-01 1.2059e-02 weaklyHypometh 1.0000e+00 1.3251e-01 insignificant 7.8591e-01 1.1311e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1386481 2.6931e-02 weaklyHypometh 4.3437e-01 insignificant chr22 36272545 36273545 155934 CARD10 ENSG00000100065 0.6633281 131 7 0.3624891 115 4 0.803973 105 4 0.7456116 72 4 0.7042017 64 5 0.664966 171 5 0.451270 57 3 0.639656 118 5 0.464782 88 4 0.596029 94 5 0.8236843 217 7 0.383506 53 4 0.5577753 108 4 0.766667 16 1 0.548413 45 4 0.625000 24 1 0.177083 31 4 0.6332133 104 4 0.4742310 107 7 0.592175 143 5 0.6142113 97 6 0.4573953 73 4 0.822099 107 4 0.620442 65 4 0.678586 151 6 0.474169 167 5 0.580491 110 7 0.4793651 23 2 0.659851 67 5 0.698037 156 7 0.5354738 171 5 0.506967 188 5 0.0668934 189 7 0.034341 95 5 0.0128676 175 7 0.008658 187 6 0.2396978 71 5 0.0738274 240 7 0.4613995 76 5 0.6250916 137 7 0.4848214 47 4 0.588029 82 5 0.279684 83 5 0.6614872 0.463360 0.765627 0.6462309 0.5373203 0.816270 0.477296 0.641374 0.596032 0.698607 0.6651717 0.359171 0.554465 0.603251 0.629286 0.573285 0.2156572 0.5542106 0.4219139 0.6156131 0.6995040 0.4112521 0.711401 0.692318 0.735569 0.592186 0.6222164 0.447619 0.509977 0.678653 0.5514733 0.606631 0.098730 0.083654 0.0100490 0.000000 0.213942 0.1081573 0.5428862 0.5551282 0.5616575 0.432194 0.377495 2 0.615385 0.608601 0.00892802 5 0.703093 0.528020 0.17507290 7.4358e-01 9.5587e-01 insignificant 1.000000 1.0000000 insignificant 0.93649 5.7686e-01 insignificant 1 1.0000000 insignificant -0.01002122 0.83674690 lowCoverage 1.00000 lowCoverage 0.615094 0.0554393 0.5452355 5 0.670533 0.1817765 0.48875662 1.4581e-31 1.0000e+00 hypermethylated 1.1216e-29 1.0000e+00 hypermethylated 1.9451e-13 1.0000e+00 hypermethylated 2.7787e-11 1.00000000 hypermethylated 5.1119e-01 1.8152e-08 lowCoverage 3.0253e-06 lowCoverage 0.614887 0.4988235 0.1129566 5 0.623466 0.524986 0.09848032 1.7017e-02 9.9471e-01 weaklyHypermeth 2.7176e-01 1.0000e+00 insignificant 2.8905e-02 9.9457e-01 weaklyHypermeth 5.4538e-01 1.00000000 insignificant 0.09609778 2.1358e-01 lowCoverage 1.00000000 lowCoverage 0.608315 0.0553814 0.5475921 5 0.475578 0.1615791 0.3139990 9.8080e-34 1.0000e+00 hypermethylated 1.6347e-31 1.0000e+00 hypermethylated 1.2872e-11 1.0000e+00 hypermethylated 1.4302e-09 1.000000 hypermethylated 0.5212098 7.6371e-08 hypermethylated 1.5274e-05 hypermethylated 0.609204 0.4988235 0.0985810 5 0.611458 0.524986 0.0864714 7.8007e-03 9.9308e-01 weaklyHypermeth 1.5295e-01 1.0000e+00 insignificant 1.6539e-02 9.9837e-01 weaklyHypermeth 3.9378e-01 1.000000 insignificant 0.1061190 1.6812e-01 insignificant 1.0000000 insignificant 0.0544503 0.4988235 -0.4282353 5 0.0648874 0.524986 -0.4600987 1.0000e+00 1.3063e-16 hypomethylated 1.0000e+00 2.1772e-14 hypomethylated 1.0000e+00 4.6722e-07 hypomethylated 1.0000e+00 3.8935e-05 hypomethylated -0.4150908 7.2962e-04 hypomethylated 2.9185e-02 hypomethylated chr22 36434847 36435847 155935 TRIOBP ENSG00000100106 0.9160290 181 8 0.8492855 240 10 0.709793 280 10 0.9153620 154 6 0.9281464 182 10 0.790565 219 9 0.778770 262 9 0.715591 179 10 0.897411 236 9 0.819042 199 10 0.7868578 344 10 0.789658 237 10 0.8264383 316 10 NA 0 0 0.901387 244 10 0.728941 188 8 0.911364 162 8 0.7612485 157 6 0.8656707 271 10 0.861281 209 9 0.8492329 138 10 0.7735598 55 3 0.821437 227 10 0.822281 145 7 0.954340 53 3 0.914138 237 10 0.718836 125 8 0.8034382 92 8 0.762036 176 9 0.766766 271 10 0.8100803 224 9 0.923932 286 8 0.8410407 243 10 0.900382 244 10 0.7005771 251 7 0.816417 125 5 0.7547505 151 10 0.7139984 272 12 0.7998025 220 6 0.9649420 235 8 0.8589466 156 6 0.883492 239 6 0.830150 212 8 0.8340012 0.824977 0.686405 0.8676303 0.8471702 0.838253 0.863741 0.794866 0.836941 0.731008 0.8213476 0.830581 0.921907 NA 0.897798 0.582823 0.8866536 0.7987024 0.9272511 0.8465382 0.9323998 0.8152961 0.842146 0.885171 0.886171 0.846002 0.7654459 0.919824 0.810913 0.911003 0.8481548 0.897521 0.731800 0.937349 0.6196538 0.935221 0.878208 0.8484017 0.7593612 0.9511605 0.8875093 0.838180 0.736957 4 0.863113 0.867785 -0.01665344 10 0.829722 0.836138 -0.00641630 7.8033e-01 1.2191e-01 insignificant 1.000000 1.0000000 insignificant 0.97773 1.3838e-01 insignificant 1 1.0000000 insignificant 0.00242375 0.92804320 insignificant 1.00000 insignificant 0.863113 0.8244930 0.0328019 10 0.829722 0.7793662 0.05035590 4.9268e-03 8.5354e-01 weaklyHypermeth 4.3217e-02 1.0000e+00 weaklyHypermeth 3.3077e-01 5.6215e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.1236e-02 2.8438e-01 insignificant 1.0000e+00 insignificant 0.862911 0.8388313 -0.0058077 6 0.770456 0.880960 -0.11050386 9.7505e-01 1.3337e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9305e-01 1.0854e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03836979 2.7749e-01 insignificant 1.00000000 insignificant 0.867915 0.8250389 0.0470970 10 0.847843 0.7951258 0.0527170 3.9215e-02 9.7625e-01 weaklyHypermeth 2.9048e-01 1.0000e+00 insignificant 3.4420e-01 7.9500e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0388122 3.3326e-01 insignificant 1.0000e+00 insignificant 0.867785 0.8385269 0.0163757 6 0.836138 0.871803 -0.0356648 5.7113e-01 3.0129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1182e-01 3.2481e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0407935 2.7444e-01 insignificant 1.0000000 insignificant 0.8244930 0.8385269 -0.0315322 6 0.7793662 0.871803 -0.0924370 9.6080e-01 4.2010e-02 weaklyHypometh 1.0000e+00 3.7647e-01 insignificant 9.5206e-01 1.6013e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0796057 9.3818e-02 insignificant 9.0010e-01 insignificant chr22 36478252 36479252 155937 TRIOBP ENSG00000100106 0.7681287 74 2 0.7310774 122 4 0.604561 144 5 0.7409420 77 1 0.7315117 79 4 0.881838 109 5 0.752941 133 5 0.576136 140 5 0.648046 128 5 0.699487 153 5 0.8140329 151 5 0.621227 99 5 0.4754290 172 5 0.659091 35 1 0.664740 110 5 0.520238 58 5 0.289216 68 4 0.3607595 89 1 0.5607777 161 5 0.826667 75 4 0.7109923 78 4 0.5456885 45 2 0.702500 82 5 0.911376 70 4 0.786232 28 1 0.621881 130 5 0.748810 83 4 0.5521978 55 3 0.795534 145 5 0.818690 166 5 0.7927254 120 5 0.817354 91 5 0.0063492 228 5 0.000000 156 5 0.0000000 126 4 0.000000 34 1 0.0323529 78 4 0.0000000 159 5 0.5184397 56 1 0.3052632 91 2 0.4836601 53 1 0.140086 66 1 0.474702 63 1 0.8215556 0.692918 0.657343 0.7873214 0.7054766 0.826886 0.787509 0.553050 0.704050 0.756792 0.7487353 0.609799 0.430656 0.793732 0.697470 0.769647 0.3315988 0.4285872 0.5607130 0.8109557 0.9871109 0.3534414 0.850804 0.942761 0.621658 0.775948 0.6757826 0.605952 0.748014 0.817714 0.6908861 0.807030 0.029082 0.000000 0.0000000 0.000000 0.058145 0.0000000 0.4329465 0.2915900 0.4853970 0.286924 0.255786 1 0.665136 0.773102 -0.11463334 4 0.580836 0.701787 -0.12095133 9.9944e-01 3.2271e-04 lowCoverage 1.000000 0.0806763 lowCoverage 0.99490 2.4046e-03 lowCoverage 1 0.4007703 lowCoverage -0.08732270 0.07300407 lowCoverage 1.00000 lowCoverage 0.665136 0.0089629 0.6538857 5 0.580836 0.0039642 0.57687196 5.1963e-36 1.0000e+00 hypermethylated 8.6605e-34 1.0000e+00 hypermethylated 1.5235e-12 1.0000e+00 hypermethylated 1.5235e-10 1.00000000 hypermethylated 6.3989e-01 4.6806e-14 lowCoverage 4.6806e-11 lowCoverage 0.666206 0.3343465 0.3482113 1 0.666504 0.365288 0.30121549 1.5246e-10 1.0000e+00 lowCoverage 1.1728e-08 1.0000e+00 lowCoverage 6.9263e-06 1.0000e+00 lowCoverage 6.2966e-04 1.00000000 lowCoverage 0.26191204 1.6341e-02 lowCoverage 0.49272811 lowCoverage 0.773102 0.0089629 0.7667075 4 0.701787 0.0039642 0.6978233 4.0879e-41 1.0000e+00 lowCoverage 1.3626e-38 1.0000e+00 lowCoverage 3.9030e-11 1.0000e+00 lowCoverage 3.5482e-09 1.000000 lowCoverage 0.7272147 7.6671e-11 lowCoverage 2.5557e-08 lowCoverage 0.777985 0.3343465 0.4137076 1 0.782502 0.365288 0.4172140 2.9338e-13 1.0000e+00 lowCoverage 4.8896e-11 1.0000e+00 lowCoverage 2.8809e-07 1.0000e+00 lowCoverage 7.2022e-05 1.000000 lowCoverage 0.3492347 4.8196e-03 lowCoverage 0.3707382 lowCoverage 0.0090090 0.3343465 -0.3224824 1 0.0055499 0.365288 -0.3597386 1.0000e+00 2.1532e-11 lowCoverage 1.0000e+00 1.2666e-09 lowCoverage 1.0000e+00 1.2279e-06 lowCoverage 1.0000e+00 7.6742e-05 lowCoverage -0.3779800 5.9842e-03 lowCoverage 1.5228e-01 lowCoverage chr22 37133681 37134681 155945 CSNK1E ENSG00000100181,ENSG00000213923 0.6388889 35 4 0.4437063 75 6 0.419192 41 3 0.4571429 43 4 0.5813492 53 6 0.585755 50 5 0.292929 34 2 0.532357 60 6 0.619048 37 6 0.534722 41 5 0.6099780 146 5 0.055556 14 1 0.5788515 68 6 0.601852 49 5 0.540410 45 6 0.340000 12 1 0.208333 21 2 0.5230880 62 5 0.8000000 29 4 0.513889 30 4 0.6700000 19 2 0.6000000 13 0 0.483165 50 6 0.675000 29 1 0.657143 30 4 0.719298 73 4 0.845635 36 4 0.7166667 20 2 0.750000 32 5 0.742857 46 5 0.5186508 69 4 0.379630 40 4 0.6041412 63 6 0.613889 24 2 0.4820261 84 6 0.500000 11 0 0.4006536 39 4 0.5859649 71 4 0.5534188 37 3 0.5789195 78 6 0.5753691 62 5 0.300000 29 2 0.558059 73 5 0.7067901 0.451832 0.413580 0.4965608 0.6289683 0.620339 0.292368 0.680912 0.589506 0.540895 0.6497309 0.061728 0.604388 0.619342 0.578491 0.387950 0.5132794 0.5853909 0.7122365 0.5077160 0.6266975 0.7031425 0.520389 0.704630 0.682015 0.730994 0.7742063 0.768519 0.756173 0.700000 0.5459436 0.402263 0.635932 0.632716 0.5243282 0.601852 0.446115 0.6328460 0.5593542 0.6084501 0.5741604 0.398810 0.572945 0 0.546032 0.691466 -0.07681769 4 0.524247 0.683995 -0.15974738 9.9931e-01 4.2953e-03 lowCoverage 1.000000 0.3579425 lowCoverage 0.99829 1.7343e-02 lowCoverage 1 0.7540382 lowCoverage -0.15265142 0.00771612 lowCoverage 1.00000 lowCoverage 0.546809 0.6061644 -0.0158134 5 0.544955 0.5550235 -0.01006833 4.1206e-01 8.3383e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8994e-01 3.5777e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.7260e-02 4.7365e-01 lowCoverage 1.0000e+00 lowCoverage 0.546809 0.5268817 -0.0016200 5 0.544955 0.549276 -0.00432124 6.2558e-01 3.4141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7666e-01 3.1360e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01930088 7.7471e-01 lowCoverage 1.00000000 lowCoverage 0.690789 0.6061644 0.0762563 4 0.631327 0.5550235 0.0763036 1.0266e-02 7.9048e-01 lowCoverage 8.5552e-02 1.0000e+00 lowCoverage 4.9231e-02 9.2148e-01 lowCoverage 4.3185e-01 1.000000 lowCoverage 0.1153913 3.9607e-02 lowCoverage 4.5008e-01 lowCoverage 0.690789 0.5268817 0.0692803 3 0.631327 0.549276 0.0820507 1.3005e-01 9.6447e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0871e-01 9.2251e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.1333505 7.5077e-02 lowCoverage 1.0000000 lowCoverage 0.6061644 0.5268817 0.0253366 4 0.5550235 0.549276 0.0057471 2.9476e-01 2.5599e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.4851e-01 1.3700e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0179592 7.8590e-01 lowCoverage 1.0000e+00 lowCoverage chr22 37257521 37258521 155952 DDX17 ENSG00000100201 0.8743849 257 6 0.8447293 159 6 0.826677 172 6 0.8747138 155 6 0.9038462 61 6 0.885118 301 6 0.892198 98 6 0.867690 82 6 0.719192 86 6 0.846703 83 6 0.9023941 167 6 0.871429 69 6 0.8805556 100 6 NA 0 0 0.924314 131 6 0.927885 54 6 0.776923 46 6 0.8276515 120 6 0.9252558 137 6 0.878303 251 6 0.8275835 67 6 0.8354701 61 6 0.917140 160 6 0.920635 44 6 0.797619 64 4 0.879712 143 6 0.834512 58 6 0.8825758 47 6 0.797436 66 6 0.872705 156 6 0.8711762 175 6 0.891127 386 6 0.8845238 96 6 0.832407 114 6 0.8735632 82 6 0.897603 81 6 0.8569444 59 6 0.8090626 154 6 0.9084279 247 6 0.9147723 306 6 0.8748655 204 6 0.908598 270 6 0.865528 177 6 0.8465570 0.817299 0.808707 0.8534924 0.8763736 0.863752 0.870542 0.835489 0.686020 0.830269 0.8874496 0.851921 0.846429 NA 0.911765 0.913058 0.7703297 0.8082028 0.9085443 0.8502727 0.8001704 0.8108705 0.900425 0.904562 0.755702 0.856352 0.7970334 0.865833 0.783678 0.842364 0.8414282 0.869384 0.859634 0.795658 0.8374384 0.871066 0.841282 0.7707456 0.8895682 0.9038237 0.8494755 0.885421 0.834101 6 0.879004 0.871058 -0.00166572 6 0.871601 0.872765 -0.00116415 6.0242e-01 1.0899e-01 insignificant 1.000000 1.0000000 insignificant 0.61686 1.7340e-01 insignificant 1 1.0000000 insignificant 0.00514649 0.76361450 insignificant 1.00000 insignificant 0.879004 0.8174061 0.0302519 6 0.871601 0.8498470 0.02175436 7.3225e-02 5.2875e-01 insignificant 5.1698e-01 1.0000e+00 insignificant 3.7186e-01 3.0468e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.7700e-03 7.1393e-01 insignificant 1.0000e+00 insignificant 0.879004 0.9410299 -0.0222774 6 0.871601 0.893671 -0.02206980 9.8471e-01 7.5062e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9135e-01 1.6793e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02865082 8.4688e-02 insignificant 1.00000000 insignificant 0.871058 0.8174061 0.0309682 6 0.872765 0.8498470 0.0229185 4.0414e-02 8.2077e-01 weaklyHypermeth 2.9716e-01 1.0000e+00 insignificant 4.3694e-01 4.8860e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0016235 9.3029e-01 insignificant 1.0000e+00 insignificant 0.871058 0.9410299 -0.0195577 6 0.872765 0.893671 -0.0209056 6.6234e-01 2.3177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1727e-01 2.1834e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0337973 5.0029e-02 insignificant 1.0000000 insignificant 0.8174061 0.9410299 -0.0465343 6 0.8498470 0.893671 -0.0438242 9.8135e-01 3.7712e-02 weaklyHypometh 1.0000e+00 3.4919e-01 insignificant 8.6462e-01 2.6206e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0354208 6.7007e-02 insignificant 7.6348e-01 insignificant chr22 37845828 37846828 155959 ENSG00000217676 0.7986928 122 5 0.6780837 87 5 0.620513 45 5 0.7307688 124 5 0.7138528 47 5 0.710275 180 5 0.755000 44 5 0.719307 103 5 0.642857 24 2 0.798611 31 3 0.7284478 170 5 0.740000 16 2 0.6636508 95 5 0.835714 27 3 0.731270 56 5 0.400000 16 0 NA 0 0 0.8366722 112 5 0.6974654 85 5 0.740906 102 5 0.8571429 24 2 0.8869048 69 5 0.735556 51 5 0.767619 56 5 0.592593 36 5 0.706235 98 5 0.804762 55 5 0.5714286 14 2 0.746223 93 5 0.702965 99 5 0.6980323 118 5 0.710810 191 5 0.6346154 41 5 0.835714 26 2 0.6626840 73 5 0.833333 13 0 0.7350916 45 5 0.7346667 78 5 0.7697778 79 5 0.7373529 109 5 0.7758095 93 5 0.809091 60 5 0.803143 89 5 0.7765894 0.661362 0.623932 0.7088034 0.7069833 0.690387 0.744444 0.713018 0.692641 0.777357 0.7183112 0.712121 0.651724 0.812049 0.733381 0.310606 NA 0.8172107 0.6918377 0.7274539 0.7734488 0.8578644 0.716274 0.766009 0.707071 0.698714 0.7769761 0.676323 0.736072 0.699711 0.7102080 0.696070 0.624476 0.810606 0.6370021 0.814815 0.723129 0.7206734 0.7292256 0.7205981 0.7555459 0.807239 0.787192 2 0.723419 0.735619 -0.01034845 5 0.773226 0.724795 0.04843051 6.9115e-01 4.6236e-01 insignificant 1.000000 1.0000000 insignificant 0.88073 2.8611e-01 insignificant 1 1.0000000 insignificant -0.01894775 0.58928915 lowCoverage 1.00000 lowCoverage 0.723232 0.6920290 0.0167602 5 0.727871 0.7179968 0.00987412 3.6560e-01 7.1810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7085e-01 3.0455e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.6609e-02 5.2768e-01 lowCoverage 1.0000e+00 lowCoverage 0.723232 0.7627907 -0.0367544 5 0.727871 0.768295 -0.04042394 9.7953e-01 9.6252e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8696e-01 6.0740e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.06629342 1.6416e-02 lowCoverage 0.49272811 lowCoverage 0.735849 0.6920290 0.0307481 5 0.736421 0.7179968 0.0184242 1.7951e-01 8.2361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9993e-01 8.0327e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0076617 8.6309e-01 lowCoverage 1.0000e+00 lowCoverage 0.735849 0.7627907 -0.0252504 5 0.736421 0.768295 -0.0318739 8.4802e-01 1.2029e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8052e-01 1.3712e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0473457 1.3276e-01 lowCoverage 1.0000000 lowCoverage 0.6920290 0.7627907 -0.0465249 5 0.7179968 0.768295 -0.0502981 9.7951e-01 1.1303e-01 insignificant 1.0000e+00 9.0420e-01 insignificant 8.5541e-01 3.1837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0396840 3.1649e-01 lowCoverage 1.0000e+00 lowCoverage chr22 37900119 37901119 155960 ENSG00000218071 0.0086835 199 5 0.0098413 173 5 0.023718 185 5 0.0083333 203 4 0.0045455 162 5 0.050448 313 5 0.000000 191 5 0.039568 152 5 0.018526 249 5 0.026757 211 5 0.0068966 134 5 0.063959 172 5 0.0000000 203 5 0.011905 61 3 0.023842 195 5 0.000000 114 5 0.010714 189 5 0.0038462 228 4 0.0335632 86 5 0.011849 229 5 0.0222222 98 5 0.0338095 143 5 0.063930 155 5 0.000000 98 5 0.000000 99 5 0.000000 179 5 0.016667 156 5 0.1526882 103 4 0.025762 139 5 0.012481 210 5 0.0090909 192 5 0.020748 247 5 0.0000000 149 5 0.042424 92 5 0.0000000 1 0 0.000000 61 5 0.0331110 91 4 0.0307692 142 5 0.0019231 244 5 0.0108108 234 5 0.0378882 188 5 0.000000 257 5 0.022829 229 5 0.0083594 0.013330 0.020556 0.0095986 0.0045217 0.028598 0.000000 0.024232 0.012797 0.033925 0.0079437 0.066135 0.000000 0.015675 0.029413 0.000000 0.0099476 0.0044301 0.0315821 0.0073809 0.0075625 0.0173024 0.042356 0.000000 0.000000 0.000000 0.0056719 0.119096 0.028408 0.009128 0.0030938 0.013100 0.000000 0.018007 NA 0.000000 0.025284 0.0104712 0.0034233 0.0107542 0.0206985 0.000000 0.020840 5 0.016169 0.014843 0.00219462 5 0.019568 0.020496 -0.00092844 3.0539e-01 6.2459e-01 insignificant 1.000000 1.0000000 insignificant 0.35565 3.9653e-01 insignificant 1 1.0000000 insignificant -0.01193337 0.37223712 lowCoverage 1.00000 lowCoverage 0.016169 0.0130597 0.0040077 5 0.019568 0.0191959 0.00037188 2.1518e-01 5.9450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7638e-01 7.0984e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.3245e-04 9.8862e-01 lowCoverage 1.0000e+00 lowCoverage 0.016169 0.0095486 0.0049548 5 0.019568 0.013805 0.00576302 1.0627e-01 5.2453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8676e-01 4.9125e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00315963 7.0800e-01 lowCoverage 1.00000000 lowCoverage 0.014843 0.0130597 0.0024120 5 0.020496 0.0191959 0.0013003 4.9033e-01 6.5516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9319e-01 8.4335e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0120658 4.2463e-01 lowCoverage 1.0000e+00 lowCoverage 0.014843 0.0095486 0.0019446 5 0.020496 0.013805 0.0066915 2.2637e-01 2.1163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2892e-01 3.2503e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0150930 3.0446e-01 lowCoverage 1.0000000 lowCoverage 0.0130597 0.0095486 0.0006005 5 0.0191959 0.013805 0.0053911 6.1705e-01 7.6698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3091e-01 6.9568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0030272 7.8432e-01 lowCoverage 1.0000e+00 lowCoverage chr22 37959378 37960378 155962 ENSG00000218071 0.5866740 217 9 0.6957574 232 7 0.687587 213 7 0.5747613 257 9 0.4728070 126 7 0.632688 306 9 0.793708 169 7 0.665101 276 7 0.585666 179 7 0.805852 234 7 0.7336855 203 7 0.780782 62 7 0.3951315 273 7 0.643780 188 7 0.510240 194 7 0.741224 131 6 0.678571 18 0 0.6053850 287 9 0.6439890 407 7 0.448504 252 9 0.7840040 164 7 0.3186424 127 7 0.598056 167 7 0.696370 118 7 0.904762 35 3 0.731197 308 8 0.693849 250 7 0.7224583 116 7 0.510944 323 7 0.667187 462 7 0.5851630 380 8 0.809572 291 9 0.8040067 217 7 0.959393 285 7 0.7450466 170 9 0.344753 84 5 0.8881674 118 7 0.5857235 427 9 0.3370791 265 9 0.4159716 240 9 0.4512989 204 9 0.362239 207 7 0.418529 261 9 0.6485385 0.692351 0.694311 0.4870330 0.4868277 0.675532 0.767526 0.675528 0.606723 0.803372 0.7364188 0.768291 0.391384 0.643293 0.491086 0.700856 0.6686198 0.6297880 0.6379848 0.3882074 0.7689699 0.3162486 0.635762 0.685462 0.851563 0.623183 0.6762828 0.781802 0.531331 0.645544 0.5994201 0.803253 0.822482 0.947909 0.8788789 0.305859 0.888678 0.6634619 0.2324251 0.3969380 0.3112425 0.342935 0.346080 7 0.622838 0.637692 -0.01478154 7 0.521335 0.724654 -0.20331915 9.8846e-01 6.4809e-01 insignificant 1.000000 1.0000000 insignificant 0.98303 2.1788e-01 insignificant 1 1.0000000 insignificant -0.03442223 0.50795123 insignificant 1.00000 insignificant 0.622928 0.7661538 -0.1590401 7 0.566790 0.6842614 -0.11747182 9.6291e-01 1.1347e-06 weaklyHypometh 1.0000e+00 1.4184e-04 weaklyHypometh 9.9324e-01 2.4400e-03 weaklyHypometh 1.0000e+00 0.34857356 insignificant -8.7087e-02 3.9666e-01 insignificant 1.0000e+00 insignificant 0.622928 0.3432455 0.2898678 7 0.566790 0.486572 0.08021788 5.0227e-17 1.0000e+00 hypermethylated 1.0045e-14 1.0000e+00 hypermethylated 4.7681e-12 1.0000e+00 hypermethylated 2.3841e-09 1.00000000 hypermethylated 0.23707128 1.4122e-06 hypermethylated 0.00047074 hypermethylated 0.636596 0.7667436 -0.1458101 7 0.633745 0.6842614 -0.0505163 9.8252e-01 7.9528e-05 weaklyHypometh 1.0000e+00 1.3255e-02 weaklyHypometh 9.9794e-01 7.7533e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0526646 6.1975e-01 insignificant 1.0000e+00 insignificant 0.637427 0.3426871 0.3047080 7 0.697120 0.435229 0.2618907 1.1362e-15 1.0000e+00 hypermethylated 2.8406e-13 1.0000e+00 hypermethylated 7.4728e-11 1.0000e+00 hypermethylated 3.7364e-08 1.000000 hypermethylated 0.2714935 6.0820e-05 hypermethylated 0.0202734 hypermethylated 0.7659738 0.3426871 0.4247084 9 0.6526876 0.435229 0.2174587 6.4701e-16 9.9997e-01 hypermethylated 3.2351e-13 1.0000e+00 hypermethylated 1.6799e-05 9.9784e-01 hypermethylated 6.8183e-03 1.0000e+00 hypermethylated 0.3241581 1.5650e-02 weaklyHypermeth 2.7946e-01 insignificant chr22 37965221 37966221 155965 ENSG00000218071 0.9514428 221 5 0.8163423 211 5 0.878909 218 6 0.6438676 236 5 0.7199567 176 8 0.738312 381 7 0.545743 194 8 0.680862 234 6 0.862323 252 5 0.799375 264 5 0.7143484 217 7 0.591709 140 6 0.6365455 252 6 0.764931 175 8 0.701476 260 7 0.854597 93 4 0.550487 47 4 0.7576661 227 6 0.9778022 193 6 0.924497 215 5 0.8798599 98 6 0.9310217 123 4 0.776567 214 7 0.704806 111 5 0.867061 151 6 0.900998 271 6 0.647928 164 4 0.6892046 205 6 0.846768 260 7 0.855166 367 7 0.7562389 310 7 0.919745 230 7 0.4855041 219 8 0.643840 144 6 0.5682734 230 4 0.725238 35 3 0.5750748 217 7 0.7874005 227 6 0.8532682 220 5 0.9435944 259 5 0.8958095 215 5 0.946586 171 5 0.844905 208 5 0.9057506 0.865557 0.842359 0.9040960 0.8863024 0.848324 0.841228 0.885243 0.837964 0.860775 0.8422629 0.825515 0.884014 0.856225 0.841328 0.727145 0.5279819 0.8846355 0.9585550 0.9192936 0.8679830 0.8572684 0.862352 0.941640 0.911295 0.888987 0.8505282 0.866961 0.891844 0.925222 0.8836172 0.886935 0.805778 0.602977 0.7079093 0.828714 0.798365 0.6833860 0.8518584 0.9424642 0.9241721 0.913052 0.851621 4 0.847361 0.880304 -0.02461823 6 0.577950 0.689580 -0.11163048 9.9975e-01 2.4955e-01 insignificant 1.000000 1.0000000 insignificant 0.99939 4.5096e-01 insignificant 1 1.0000000 insignificant -0.05905409 0.14958780 insignificant 1.00000 insignificant 0.847526 0.6987839 0.1592486 6 0.588343 0.5532731 0.03507015 3.8914e-11 5.9487e-01 weaklyHypermeth 7.9416e-10 1.0000e+00 weaklyHypermeth 8.8285e-03 4.8935e-01 weaklyHypermeth 1.0637e-01 1.00000000 insignificant 1.2467e-01 4.4007e-02 weaklyHypermeth 5.1608e-01 insignificant 0.869133 0.8909599 -0.0257667 5 0.626907 0.927980 -0.30107379 6.6408e-01 7.9056e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3813e-01 2.7831e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.14127300 8.9778e-04 weaklyHypometh 0.08755529 weaklyHypometh 0.880496 0.6977612 0.1878418 7 0.722263 0.5395269 0.1827357 3.8713e-11 7.1889e-01 weaklyHypermeth 9.6782e-10 1.0000e+00 weaklyHypermeth 4.9004e-04 7.8249e-01 weaklyHypermeth 9.0749e-03 1.000000 weaklyHypermeth 0.1837252 7.3737e-03 weaklyHypermeth 1.4458e-01 insignificant 0.886655 0.8909599 -0.0019606 5 0.615156 0.927980 -0.3128243 4.7714e-01 1.7487e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5703e-01 1.7500e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0822189 3.4576e-02 weaklyHypometh 0.9604436 insignificant 0.6903553 0.8908582 -0.1945003 5 0.5373871 0.918978 -0.3815909 9.9835e-01 1.7982e-05 weaklyHypometh 1.0000e+00 4.9950e-04 weaklyHypometh 9.9435e-01 1.1225e-03 weaklyHypometh 1.0000e+00 2.8727e-02 weaklyHypometh -0.2659441 1.0987e-03 weaklyHypometh 4.2259e-02 weaklyHypometh chr22 37978752 37979752 155966 ENSG00000223020 0.3950289 162 10 0.4010833 209 12 0.407436 254 12 0.5816434 116 7 0.4870655 105 9 0.489431 141 9 0.350522 131 9 0.357705 145 9 0.400163 129 9 0.544982 74 9 0.5187569 299 9 0.325512 153 6 0.1929468 249 9 NA 0 0 0.357541 188 9 0.285440 98 6 0.389033 132 9 0.3165237 146 6 0.4329549 176 9 0.448563 164 11 0.4663282 98 8 0.4433207 73 4 0.368948 113 12 0.266591 82 8 0.222222 61 4 0.367899 278 12 0.429894 90 6 0.1451178 81 8 0.457648 86 9 0.182868 336 12 0.4985136 305 12 0.677305 209 11 0.0441755 245 12 0.055177 178 9 0.0376623 88 9 0.022511 59 4 0.1740861 65 8 0.0276945 257 12 0.3814948 136 7 0.4736607 194 11 0.3893502 84 4 0.428445 175 7 0.474968 188 11 0.4835122 0.461121 0.429172 0.5170656 0.5501970 0.676229 0.316545 0.495232 0.540371 0.645385 0.4897143 0.242749 0.232041 NA 0.329828 0.210113 0.4282285 0.3307163 0.5446039 0.4253891 0.6102483 0.3978804 0.403010 0.332146 0.346903 0.415794 0.4288503 0.195435 0.680673 0.229006 0.5882368 0.611441 0.038212 0.044250 0.0380297 0.039512 0.134661 0.0587540 0.4332972 0.4452857 0.4314765 0.408782 0.470660 4 0.423966 0.395695 0.03620507 9 0.434246 0.395432 0.03881398 8.7088e-03 9.6996e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.19827 9.3774e-01 insignificant 1 1.0000000 insignificant 0.02711191 0.58737664 insignificant 1.00000 insignificant 0.423966 0.0582960 0.3592681 9 0.434246 0.0523175 0.38192805 5.4074e-40 1.0000e+00 hypermethylated 1.0815e-37 1.0000e+00 hypermethylated 3.0712e-17 1.0000e+00 hypermethylated 3.0712e-14 1.00000000 hypermethylated 3.4412e-01 2.5456e-08 hypermethylated 3.6366e-06 hypermethylated 0.423966 0.4954955 -0.0010301 4 0.434246 0.447270 -0.01302456 1.0855e-01 3.4118e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2251e-02 2.5301e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.02525034 4.0555e-01 insignificant 1.00000000 insignificant 0.395695 0.0582960 0.3306300 11 0.395432 0.0523175 0.3431141 5.5367e-19 1.0000e+00 hypermethylated 2.4073e-17 1.0000e+00 hypermethylated 1.0243e-13 1.0000e+00 hypermethylated 2.5608e-11 1.000000 hypermethylated 0.3170036 1.0987e-05 hypermethylated 9.1562e-04 hypermethylated 0.395695 0.4954955 -0.0183088 6 0.395432 0.447270 -0.0518385 7.6493e-01 4.9522e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.1257e-01 1.6423e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0523622 2.9533e-01 insignificant 1.0000000 insignificant 0.0582960 0.4954955 -0.4173429 6 0.0523175 0.447270 -0.3949526 1.0000e+00 3.5053e-29 hypomethylated 1.0000e+00 1.7527e-26 hypomethylated 1.0000e+00 2.4509e-10 hypomethylated 1.0000e+00 1.2254e-07 hypomethylated -0.3693658 7.5027e-07 hypomethylated 1.8757e-04 hypomethylated chr22 37981926 37982926 155967 ENSG00000223020 0.9165088 56 6 0.8707528 301 8 0.876142 373 8 0.7552083 26 2 0.9198771 406 8 0.858440 55 4 0.896146 462 8 0.907779 237 8 0.853579 353 8 0.900251 244 7 0.8638110 333 8 0.908406 376 8 0.9452602 309 8 NA 0 0 0.857456 315 8 0.917361 321 8 0.928596 377 8 0.9041126 36 3 0.9085291 306 8 0.853157 60 6 0.9256389 145 8 1.0000000 5 0 0.910417 104 6 0.881811 71 8 1.000000 9 0 0.879604 295 8 0.843750 71 8 0.8969907 128 8 0.768911 265 7 0.930512 304 7 0.8826189 272 8 0.953400 101 7 0.6237608 291 8 0.744227 241 8 0.6241999 166 8 0.666667 12 0 0.8090701 113 8 0.6448540 250 8 0.9062500 18 0 0.8156250 60 4 0.8333333 10 0 0.964286 16 1 0.859921 31 3 0.9249272 0.872100 0.853868 0.8446328 0.9126327 0.909967 0.898085 0.930349 0.859704 0.880838 0.8469938 0.892381 0.945971 NA 0.865993 0.896392 0.9105978 0.9048353 0.9175662 0.8554357 0.9116971 0.9409435 0.890395 0.858105 0.988788 0.896551 0.8698547 0.902982 0.813668 0.932966 0.9037306 0.942119 0.665581 0.812656 0.5525088 0.631030 0.819376 0.7024767 0.9067797 0.9011299 0.9706921 0.967514 0.815981 0 0.887788 0.902260 -0.01501841 7 0.894176 0.896662 -0.00248606 7.9106e-01 1.0263e-01 insignificant 1.000000 1.0000000 insignificant 0.98854 8.2753e-02 insignificant 1 1.0000000 insignificant -0.01974968 0.35888871 insignificant 1.00000 insignificant 0.887788 0.7157502 0.1724337 8 0.894176 0.6933307 0.20084556 2.4839e-17 1.0000e+00 weaklyHypermeth 7.0968e-16 1.0000e+00 weaklyHypermeth 7.0550e-05 9.9957e-01 weaklyHypermeth 1.5146e-03 1.00000000 weaklyHypermeth 2.0093e-01 7.7044e-04 hypermethylated 2.2660e-02 hypermethylated 0.887788 0.8814815 0.0062912 2 0.894176 0.838913 0.05526351 1.5180e-02 6.6641e-02 lowCoverage 2.5300e-01 1.0000e+00 lowCoverage 9.6799e-01 1.0706e-02 lowCoverage 1.0000e+00 0.81358879 lowCoverage 0.01050513 7.2780e-01 lowCoverage 1.00000000 lowCoverage 0.902260 0.7157502 0.1864028 7 0.896662 0.6933307 0.2033316 2.3585e-10 1.0000e+00 weaklyHypermeth 5.4848e-09 1.0000e+00 weaklyHypermeth 1.6285e-04 9.9997e-01 weaklyHypermeth 3.2832e-03 1.000000 weaklyHypermeth 0.2206747 1.8637e-04 hypermethylated 6.9027e-03 hypermethylated 0.902260 0.8814815 0.0201235 2 0.896662 0.838913 0.0577496 9.3906e-02 6.0212e-01 lowCoverage 9.6811e-01 1.0000e+00 lowCoverage 9.2290e-01 2.0207e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0302548 3.8109e-01 lowCoverage 1.0000000 lowCoverage 0.7157502 0.8814815 -0.1631282 2 0.6933307 0.838913 -0.1455820 9.9927e-01 1.3093e-03 lowCoverage 1.0000e+00 2.4247e-02 lowCoverage 9.9997e-01 1.0274e-03 lowCoverage 1.0000e+00 2.7038e-02 lowCoverage -0.1904199 1.1753e-03 lowCoverage 4.2598e-02 lowCoverage chr22 39952979 39953979 156034 L3MBTL2 ENSG00000100395 0.90379 421 9 0.95138 280 10 0.76417 328 12 0.95853 561 10 0.89545 135 8 0.95676 502 10 0.93175 281 9 0.79252 304 10 0.87287 249 9 0.89972 245 8 0.85539 584 12 0.92830 135 9 0.85912 277 9 0.87000 210 8 0.90688 466 9 0.92619 42 6 0.54667 34 2 0.95892 545 10 0.95649 572 9 0.89416 468 9 0.81735 183 10 0.874250 202 9 0.84117 226 12 0.77390 208 8 0.91527 137 8 0.80593 351 10 0.91355 396 10 0.74524 185 9 0.822060 458 8 0.90507 329 11 0.90268 304 10 0.95728 498 12 0.951533 255 10 0.8151089 230 9 0.79329545 493 9 0.903889 39 3 0.648947 244 11 0.8604789 492 10 0.700295 340 9 0.88775 493 11 0.89713 422 9 0.97171 382 8 0.904755 399 8 0.96843 0.92398 0.91389 0.95382 0.97896 0.95500 0.91215 0.96077 0.95030 0.96334 0.94477 0.90810 0.964016 0.93101 0.92193 0.90585 0.85782 0.94839 0.937309 0.95571 0.92183 0.969674 0.90708 0.97870 0.96283 0.97074 0.90036 0.99173 0.951381 0.92872 0.96552 0.95507 0.9255652 0.977856 0.9894302 0.93732 0.8968495 0.9697423 0.981021 0.95121 0.975930 0.966252 0.971949 8 0.94079 0.94277 -0.0040527 10 0.76312 0.75007 0.0130469 0.75272 5.5898e-01 insignificant 1 1.0000000 insignificant 0.69279 5.5445e-01 insignificant 1 1.0000000 insignificant 0.0253080 0.3792316 insignificant 1 insignificant 0.94103 0.9418140 -0.0059800 10 0.76599 0.647191 0.1188025 1.3748e-01 4.2737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5976e-01 4.0626e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0525782 3.0657e-01 insignificant 1.0000e+00 insignificant 0.94143 0.96611 -0.0252688 9 0.73168 0.69930 0.0323769 9.9949e-01 3.2887e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9839e-01 1.3292e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0091267 8.6186e-01 insignificant 1.000000 insignificant 0.94302 0.9418140 0.00052485 10 0.76478 0.647191 0.1175932 8.2114e-01 7.7640e-01 insignificant 1.0000e+00 1.000000 insignificant 9.5794e-01 0.8301526 insignificant 1.0000e+00 1 insignificant 0.02727011 5.7941e-01 insignificant 1.0000e+00 insignificant 0.94382 0.967060 -0.02190692 9 0.80009 0.79254 0.0075454 9.9349e-01 3.0372e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.7265e-01 0.1090206 insignificant 1.0000e+00 1 insignificant -0.0161813 0.7545556 insignificant 1 insignificant 0.9434286 0.967060 -0.0160583 9 0.7334834 0.79254 -0.05906018 0.9954953 1.6856e-01 insignificant 1 1.0000e+00 insignificant 0.9568718 5.3419e-01 insignificant 1 1.0000e+00 insignificant -0.0434514 5.0562e-01 insignificant 1.0000000 insignificant chr22 40475152 40476152 156040 ENSG00000206813 0.75157 183 6 0.57155 216 7 0.58750 152 7 0.64936 100 6 0.57485 131 7 0.66735 446 7 0.69277 180 7 0.59585 119 7 0.64935 91 6 0.74948 95 6 0.74712 232 7 0.63167 123 7 0.60737 134 7 NA 0 0 0.71795 128 7 0.50357 83 6 0.67885 107 6 0.64410 161 7 0.66725 148 7 0.71767 330 7 0.60749 89 5 0.647662 126 7 0.61400 156 7 0.61216 111 6 0.50340 40 5 0.70510 205 7 0.63636 60 5 0.86905 55 5 0.660542 147 7 0.64846 220 7 0.64636 207 7 0.65345 413 7 0.436084 216 7 0.3814076 110 7 0.57302613 175 7 0.600461 44 2 0.456127 115 6 0.5311654 211 7 0.675746 151 7 0.66512 199 7 0.71596 155 7 0.66917 143 6 0.596255 152 7 0.75019 0.61226 0.60680 0.67804 0.63534 0.69917 0.65358 0.64378 0.71741 0.79618 0.75087 0.66558 0.649881 NA 0.71329 0.45935 0.63348 0.69265 0.729923 0.73601 0.59435 0.670092 0.63375 0.66069 0.60745 0.71585 0.64898 0.84861 0.667988 0.64311 0.64014 0.67269 0.4425604 0.298982 0.5568931 0.66833 0.4904610 0.5796221 0.705605 0.71284 0.745331 0.728917 0.620503 4 0.67521 0.66922 0.0141812 7 0.66025 0.64775 0.0124979 0.22300 3.6652e-01 insignificant 1 1.0000000 insignificant 0.57703 3.9948e-01 insignificant 1 1.0000000 insignificant 0.0025692 0.9299256 insignificant 1 insignificant 0.67521 0.4948335 0.1763503 7 0.66025 0.490870 0.1693800 2.1968e-15 1.0000e+00 weaklyHypermeth 1.8307e-13 1.0000e+00 weaklyHypermeth 6.7412e-07 1.0000e+00 weaklyHypermeth 7.4903e-05 1.00000000 weaklyHypermeth 0.1565265 4.3793e-03 weaklyHypermeth 2.0854e-01 insignificant 0.67521 0.74750 -0.0192315 7 0.66025 0.66175 -0.0015045 6.0812e-01 4.9196e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.5224e-01 2.7739e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0115464 6.5246e-01 insignificant 1.000000 insignificant 0.66922 0.4948335 0.15994667 7 0.64775 0.490870 0.1568822 3.8618e-12 1.0000e+00 weaklyHypermeth 3.2182e-10 1.000000 weaklyHypermeth 1.0264e-06 0.9999999 weaklyHypermeth 1.1404e-04 1 weaklyHypermeth 0.15395730 4.6581e-03 weaklyHypermeth 2.3391e-01 insignificant 0.66922 0.747500 -0.02973405 7 0.64775 0.66175 -0.0140024 7.3388e-01 3.5718e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.1266e-01 0.0523686 insignificant 1.0000e+00 1 insignificant -0.0141156 0.6555209 insignificant 1 insignificant 0.4948335 0.747500 -0.1888439 7 0.4908699 0.66175 -0.17088453 0.9984576 9.6173e-10 weaklyHypometh 1 1.3739e-07 weaklyHypometh 0.9998629 7.2637e-06 weaklyHypometh 1 1.2106e-03 weaklyHypometh -0.1680729 3.2286e-03 weaklyHypometh 0.1735869 insignificant chr22 40725962 40726962 156042 WBP2NL ENSG00000183066 0.69120 84 5 0.55871 60 4 0.67500 51 5 0.61531 95 5 0.58333 23 3 0.78080 143 5 0.50615 43 4 0.78705 84 5 0.63664 50 5 0.59435 43 5 0.71641 146 5 0.67500 16 1 0.72220 84 5 0.76488 32 4 0.65417 36 2 0.66414 21 1 0.83333 8 1 0.80774 83 4 0.81273 77 5 0.87457 91 4 0.75698 34 5 0.683333 18 0 0.54918 45 5 0.75667 28 2 0.85556 43 4 0.87359 77 4 0.93333 17 0 0.77500 12 1 0.744444 27 4 0.54327 60 5 0.72000 59 4 0.83436 129 4 0.610000 29 4 0.6600000 51 5 0.87272727 60 5 0.933333 10 0 0.607576 53 5 0.8478431 63 4 0.717593 82 4 0.75238 66 4 0.65926 96 4 0.94947 51 4 0.713636 106 5 0.83502 0.68418 0.65783 0.74904 0.68485 0.75943 0.54079 0.80052 0.76849 0.75974 0.72725 0.66667 0.882154 0.91775 0.81212 0.81451 0.79099 0.82535 0.819274 0.85052 0.77042 0.676768 0.66990 0.77778 0.84747 0.87809 0.94949 0.93682 0.890909 0.68386 0.74394 0.83823 0.6212121 0.660269 0.8677686 0.91919 0.5705234 0.8357695 0.853295 0.89957 0.664116 0.950877 0.865634 0 0.77165 0.78142 -0.0068857 4 0.68001 0.68159 -0.0015726 0.28193 2.2015e-01 lowCoverage 1 1.0000000 lowCoverage 0.85325 2.7883e-01 lowCoverage 1 1.0000000 lowCoverage -0.0544570 0.1992080 lowCoverage 1 lowCoverage 0.77165 0.7293233 0.0391860 5 0.68001 0.735548 -0.0555330 2.5230e-02 4.7504e-01 weaklyHypermeth 3.3640e-01 1.0000e+00 insignificant 2.8800e-01 2.7506e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0575605 3.9730e-01 lowCoverage 1.0000e+00 lowCoverage 0.77165 0.80549 -0.0266586 4 0.68001 0.68829 -0.0082793 8.5592e-01 1.8685e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2934e-01 1.1719e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0607825 3.1178e-01 lowCoverage 1.000000 lowCoverage 0.78142 0.7293233 0.05384554 4 0.68159 0.735548 -0.0539604 9.5260e-03 5.5389e-01 lowCoverage 1.4655e-01 1.000000 lowCoverage 7.8505e-02 0.6802335 lowCoverage 1.0000e+00 1 lowCoverage -0.00310348 9.6501e-01 lowCoverage 1.0000e+00 lowCoverage 0.78142 0.805486 -0.02723723 4 0.68159 0.68829 -0.0067067 6.7598e-01 3.0718e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.7783e-01 0.4178634 lowCoverage 1.0000e+00 1 lowCoverage -0.0063255 0.9195755 lowCoverage 1 lowCoverage 0.7293233 0.805486 -0.0797212 4 0.7355479 0.68829 0.04725372 0.9943948 9.3494e-02 lowCoverage 1 1.0000e+00 lowCoverage 0.8449297 1.6441e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0032220 9.6783e-01 lowCoverage 1.0000000 lowCoverage chr22 41022013 41023013 156049 ENSG00000182057 0.83490 211 9 0.78036 183 9 0.83131 148 9 0.75802 118 7 0.79091 95 8 0.89639 236 8 0.73792 144 9 0.78008 113 8 0.85856 168 9 0.84987 127 9 0.84461 367 9 0.80740 108 9 0.90604 231 9 NA 0 0 0.84457 142 9 0.91270 73 6 0.81420 63 5 0.81451 154 9 0.83525 261 9 0.80658 200 8 0.89903 144 9 0.812963 92 5 0.76466 189 9 0.83357 120 9 0.51859 55 5 0.83044 186 9 0.79454 135 9 0.69850 84 7 0.819943 137 9 0.80244 168 8 0.82890 177 9 0.75938 299 8 0.047938 229 9 0.0179108 240 9 0.00000000 168 7 0.031054 125 5 0.470964 102 9 0.0252525 271 9 0.644630 213 8 0.73841 277 8 0.86565 125 5 0.72941 171 8 0.383078 190 8 0.80576 0.77735 0.79303 0.76743 0.80617 0.83800 0.76473 0.84224 0.86333 0.80676 0.86100 0.79258 0.897323 NA 0.81755 0.86565 0.90270 0.77585 0.814209 0.83095 0.92037 0.703761 0.80422 0.84932 0.72271 0.84790 0.70595 0.85184 0.848449 0.75246 0.83809 0.84952 0.0377651 0.014139 0.0237034 0.04767 0.4781280 0.0190963 0.643484 0.77409 0.806873 0.808190 0.456923 5 0.83768 0.83091 0.0028770 9 0.82982 0.81463 0.0151842 0.39452 8.4671e-01 insignificant 1 1.0000000 insignificant 0.39422 7.5169e-01 insignificant 1 1.0000000 insignificant 0.0462907 0.1408721 insignificant 1 insignificant 0.83768 0.0704846 0.7652336 9 0.82982 0.076047 0.7537703 1.2211e-100 1.0000e+00 hypermethylated 1.2211e-97 1.0000e+00 hypermethylated 1.4392e-21 1.0000e+00 hypermethylated 7.1959e-19 1.00000000 hypermethylated 0.7276838 1.6173e-04 hypermethylated 2.0216e-02 hypermethylated 0.83768 0.69365 0.1332213 8 0.82982 0.66734 0.1624818 6.7542e-10 1.0000e+00 weaklyHypermeth 1.6885e-07 1.0000e+00 weaklyHypermeth 1.1041e-05 9.9999e-01 weaklyHypermeth 3.6804e-03 1.0000000 weaklyHypermeth 0.1543001 1.2759e-01 insignificant 1.000000 insignificant 0.83091 0.0704846 0.75856215 9 0.81463 0.076047 0.7385860 4.8006e-59 1.0000e+00 hypermethylated 2.4003e-56 1.000000 hypermethylated 5.2518e-16 1.0000000 hypermethylated 2.6259e-13 1 hypermethylated 0.68139306 9.7509e-05 hypermethylated 1.2189e-02 hypermethylated 0.83091 0.693648 0.13392913 8 0.81463 0.66734 0.1472976 4.0318e-05 1.0000e+00 weaklyHypermeth 4.7040e-03 1.0000000 weaklyHypermeth 1.0521e-02 0.9999357 weaklyHypermeth 7.5152e-01 1 insignificant 0.1080093 0.2603374 insignificant 1 insignificant 0.0704846 0.693648 -0.6268273 8 0.0760467 0.66734 -0.59128848 1.0000000 1.0020e-25 hypomethylated 1 5.0102e-23 hypomethylated 1.0000000 4.9667e-10 hypomethylated 1 2.4496e-07 hypomethylated -0.5733837 6.1082e-04 hypomethylated 0.1018041 insignificant chr22 41982464 41983464 156059 TTLL12 ENSG00000100304 0.88239 208 8 0.85329 264 9 0.71335 161 8 0.90468 213 8 0.84538 110 8 0.90798 249 9 0.92438 129 9 0.88192 167 8 0.69734 107 6 0.87963 87 5 0.90626 205 8 0.59179 72 5 0.86237 130 5 0.86667 12 0 0.81784 116 5 0.73049 47 5 0.65774 75 5 0.75338 189 6 0.88026 112 8 0.88428 203 9 0.93873 102 8 0.926606 88 3 0.68875 162 8 0.80470 108 9 0.91525 142 7 0.92706 239 8 0.82361 118 7 0.81259 111 6 0.811796 157 8 0.94338 252 8 0.93873 276 8 0.86005 284 8 0.736681 189 8 0.6725826 141 8 0.52173913 104 2 0.679563 107 7 0.686878 195 9 0.6860231 282 8 0.921517 233 8 0.91448 236 8 0.92637 203 7 0.94423 177 7 0.965805 291 9 0.89553 0.87232 0.90240 0.88572 0.94961 0.88827 0.93687 0.93463 0.84812 0.97271 0.86616 0.76655 0.845146 0.89588 0.88141 0.78463 0.70932 0.85529 0.930045 0.91447 0.90845 0.842894 0.80732 0.83465 0.97822 0.89963 0.82575 0.95659 0.817117 0.91419 0.91564 0.93829 0.6236776 0.507374 0.7676290 0.66677 0.7173219 0.6719037 0.889549 0.90334 0.921269 0.930742 0.923741 3 0.87285 0.89505 -0.0223318 8 0.86231 0.81451 0.0477975 0.35733 9.0251e-02 insignificant 1 1.0000000 insignificant 0.80050 3.3426e-02 weaklyHypometh 1 1.0000000 insignificant -0.0438671 0.1737012 insignificant 1 insignificant 0.87255 0.6637168 0.2080727 8 0.79045 0.610276 0.1801726 2.6601e-13 1.0000e+00 hypermethylated 1.5648e-11 1.0000e+00 hypermethylated 5.0206e-05 9.9971e-01 hypermethylated 3.1379e-03 1.00000000 hypermethylated 0.1581599 1.3395e-03 weaklyHypermeth 9.5678e-02 weaklyHypermeth 0.87272 0.93246 -0.0424916 8 0.84854 0.94080 -0.0922637 9.9968e-01 1.3660e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9925e-01 1.6997e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.1124094 7.5524e-05 weaklyHypometh 0.037762 weaklyHypometh 0.89505 0.6643701 0.23589033 8 0.81451 0.665755 0.1487544 1.3723e-14 9.9984e-01 hypermethylated 1.9605e-12 1.000000 hypermethylated 1.0260e-06 0.9979873 hypermethylated 1.1404e-04 1 hypermethylated 0.20202698 2.3819e-04 hypermethylated 2.6466e-02 hypermethylated 0.89587 0.932456 -0.02533867 8 0.86263 0.94080 -0.0781742 7.9388e-01 4.7808e-03 weaklyHypometh 1.0000e+00 0.9001970 insignificant 9.5237e-01 0.0434681 weaklyHypometh 1.0000e+00 1 insignificant -0.0685423 0.0149762 weaklyHypometh 1 insignificant 0.6640394 0.932456 -0.2590096 8 0.6323309 0.94080 -0.30847079 1.0000000 1.2674e-09 hypomethylated 1 1.5843e-07 hypomethylated 1.0000000 1.1932e-06 hypomethylated 1 2.3863e-04 hypomethylated -0.2705693 1.4056e-04 hypomethylated 0.0281124 hypomethylated chr22 42023606 42024606 156063 TTLL12 ENSG00000100304 0.87813 120 4 0.85566 108 5 0.69034 102 5 0.94839 152 4 0.72857 72 6 0.77171 145 4 0.74702 49 5 0.75146 129 5 0.81051 88 4 0.92846 90 5 0.78256 174 5 0.92182 33 4 0.88748 77 4 0.92698 69 5 0.81811 130 4 0.80000 34 4 0.66667 3 0 0.75868 136 4 0.90072 162 4 0.78602 94 4 0.84127 47 3 0.776667 52 4 0.67857 62 4 0.83532 62 3 0.97778 58 5 0.93426 138 5 0.84503 109 5 0.81620 76 4 0.943216 91 4 0.85533 133 5 0.77766 99 5 0.94037 119 4 0.077778 115 5 0.0857143 57 5 0.36153846 76 3 0.080000 20 1 0.050439 150 4 0.1799430 146 5 0.909677 95 4 0.75933 86 4 0.79520 74 4 0.65382 85 4 0.832755 84 4 0.87163 0.74931 0.82198 0.93227 0.98321 0.91771 0.87439 0.86475 0.79452 0.90890 0.93060 0.91685 0.872658 0.90221 0.89241 1.00000 0.77487 0.77567 0.835452 0.94719 0.97161 0.728954 0.89781 0.94404 0.98135 0.93429 0.77075 0.91840 0.914748 0.85665 0.92341 0.93489 0.0093268 0.000000 0.3320170 0.00000 0.0215136 0.0189864 0.924182 0.78415 0.780205 0.711055 0.808726 2 0.86731 0.88995 -0.0236405 5 0.72302 0.77829 -0.0552771 0.87377 5.7360e-02 insignificant 1 1.0000000 insignificant 0.96675 8.8595e-02 insignificant 1 1.0000000 insignificant -0.0338419 0.2887253 lowCoverage 1 lowCoverage 0.87282 0.0817052 0.8026875 5 0.80430 0.076254 0.7280501 1.3053e-60 1.0000e+00 hypermethylated 4.3509e-58 1.0000e+00 hypermethylated 1.0567e-12 1.0000e+00 hypermethylated 2.6418e-10 1.00000000 hypermethylated 0.6787286 5.5268e-06 lowCoverage 9.2114e-04 lowCoverage 0.87404 0.74292 0.1174639 4 0.88516 0.81012 0.0750433 1.0248e-05 5.8823e-01 lowCoverage 1.2810e-03 1.0000e+00 lowCoverage 2.7530e-03 7.8345e-01 lowCoverage 2.7530e-01 1.0000000 lowCoverage 0.0278067 5.7047e-01 lowCoverage 1.000000 lowCoverage 0.89220 0.0833333 0.82204004 5 0.83952 0.208217 0.6313008 1.3498e-42 1.0000e+00 hypermethylated 4.4995e-40 1.000000 hypermethylated 9.4286e-11 1.0000000 hypermethylated 2.3572e-08 1 hypermethylated 0.71257057 1.3257e-06 lowCoverage 4.0893e-04 lowCoverage 0.89448 0.742925 0.11607943 4 0.89533 0.81012 0.0852043 2.0620e-04 6.4636e-01 lowCoverage 1.7183e-02 1.0000000 lowCoverage 1.9786e-03 0.8200380 lowCoverage 2.4733e-01 1 lowCoverage 0.0616486 0.2490534 lowCoverage 1 lowCoverage 0.0818505 0.742925 -0.7205451 4 0.0915045 0.81012 -0.71861684 1.0000000 1.0507e-21 lowCoverage 1 3.5025e-19 lowCoverage 1.0000000 2.0495e-08 lowCoverage 1 5.1238e-06 lowCoverage -0.6509219 3.0851e-06 lowCoverage 0.0019379 lowCoverage chr22 42461210 42462210 156087 MPPED1 ENSG00000186732 0.78745 61 3 0.86769 147 6 0.71948 132 5 0.82619 25 2 0.74279 52 3 0.84134 88 5 0.75884 131 3 0.88714 129 5 0.69238 106 3 0.84120 104 5 0.90530 146 6 0.69697 83 3 0.79022 146 5 0.78571 14 2 0.91734 119 4 0.91564 74 3 0.69848 80 3 0.67289 77 4 0.81437 99 5 0.89318 95 5 0.84781 52 3 0.500000 8 0 0.92381 87 3 0.85923 63 5 0.51667 10 1 0.89277 166 6 0.90476 65 5 0.72778 25 1 0.702637 87 5 0.90906 192 5 0.83370 156 5 0.90428 117 5 0.570194 104 3 0.5340756 56 3 0.55303030 39 3 0.400000 21 3 0.600433 46 4 0.3067273 184 5 0.728182 98 5 0.79326 91 5 0.74167 33 3 0.80737 60 5 0.838889 36 3 0.79617 0.85173 0.70275 0.86049 0.77091 0.85106 0.79685 0.87006 0.69631 0.82119 0.89337 0.69791 0.767034 0.80361 0.89783 0.89230 0.71176 0.62522 0.803638 0.91394 0.84045 0.533708 0.90722 0.88263 0.61419 0.87875 0.90519 0.73283 0.683854 0.89134 0.79551 0.90450 0.4895191 0.471978 0.6207226 0.24719 0.5508293 0.2472003 0.694842 0.75931 0.725187 0.772147 0.819476 0 0.81447 0.86576 -0.0516117 5 0.83947 0.87213 -0.0326558 0.98790 5.2641e-04 weaklyHypometh 1 0.1052815 insignificant 0.93433 1.5288e-02 weaklyHypometh 1 1.0000000 insignificant 0.0091889 0.8477696 lowCoverage 1 lowCoverage 0.81447 0.3711111 0.4431751 5 0.83947 0.437872 0.4015983 8.3325e-17 9.9996e-01 hypermethylated 7.5750e-15 1.0000e+00 hypermethylated 1.8795e-05 9.9796e-01 hypermethylated 1.3425e-03 1.00000000 hypermethylated 0.3086537 6.1389e-04 lowCoverage 4.7222e-02 lowCoverage 0.81447 0.75786 0.0566331 5 0.83947 0.81051 0.0289644 6.5371e-02 8.5067e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5523e-01 8.7178e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0208579 4.6285e-01 lowCoverage 1.000000 lowCoverage 0.86576 0.3711111 0.49195571 5 0.87213 0.437872 0.4342542 2.5035e-12 9.9992e-01 hypermethylated 2.5035e-10 1.000000 hypermethylated 2.4662e-05 0.9975447 hypermethylated 2.0552e-03 1 hypermethylated 0.29946484 4.3611e-04 lowCoverage 4.3611e-02 lowCoverage 0.86576 0.757862 0.11009442 5 0.87213 0.81051 0.0616202 3.3500e-03 9.6841e-01 weaklyHypermeth 1.9706e-01 1.0000000 insignificant 6.8902e-02 0.9666568 insignificant 1.0000e+00 1 insignificant 0.0116690 0.8117087 lowCoverage 1 lowCoverage 0.3711111 0.757862 -0.3787695 5 0.4378716 0.81051 -0.37263397 0.9999835 8.1585e-05 hypomethylated 1 3.5472e-03 hypomethylated 0.9999059 2.1783e-03 weaklyHypometh 1 1.1465e-01 insignificant -0.2877958 8.9041e-04 lowCoverage 0.1077050 lowCoverage chr22 43639891 43640891 156101 PRR5-ARHGAP8 ENSG00000186654 0.89325 215 6 0.86824 80 5 0.84162 175 8 0.83397 108 3 0.97727 72 4 0.76339 198 6 0.93988 103 4 0.90972 54 6 0.72670 90 3 0.94753 27 2 0.88550 97 6 0.96704 159 6 0.93651 30 4 0.87500 10 0 0.90837 76 6 0.93692 66 4 0.90018 39 3 0.92606 150 6 0.86869 301 11 0.91102 181 8 0.93918 60 6 0.902063 54 6 0.93413 127 6 0.95457 113 8 0.85547 90 4 0.88296 229 8 0.94792 58 3 0.82609 64 4 0.895341 140 6 0.96603 140 6 0.96676 273 6 0.91738 188 6 0.871024 141 8 0.4986801 128 6 0.39062500 38 3 0.613168 164 6 0.558750 144 6 0.8206470 214 8 0.870571 190 6 0.94928 136 6 0.93322 73 5 0.85826 195 6 0.937073 165 6 0.90368 0.91430 0.91468 0.90815 0.93420 0.90436 0.87906 0.87500 0.85367 0.86816 0.88269 0.93057 0.895775 0.76307 0.90066 0.92295 0.90041 0.92994 0.860790 0.91259 0.88253 0.850585 0.91584 0.94300 0.89609 0.93843 0.87354 0.98260 0.902143 0.97676 0.95862 0.91249 0.8067462 0.716368 0.3775658 0.88082 0.8065237 0.8682657 0.943861 0.95588 0.985025 0.912349 0.895727 2 0.91023 0.92513 -0.0138198 7 0.92942 0.91743 0.0119937 0.48129 3.4765e-01 insignificant 1 1.0000000 insignificant 0.69116 1.8388e-01 insignificant 1 1.0000000 insignificant -0.0248140 0.2042447 insignificant 1 insignificant 0.91023 0.7118644 0.1517827 7 0.92942 0.784077 0.1453452 6.6618e-13 9.9970e-01 weaklyHypermeth 3.7010e-11 1.0000e+00 weaklyHypermeth 1.0715e-04 9.9976e-01 weaklyHypermeth 5.3581e-03 1.00000000 weaklyHypermeth 0.2653603 1.6872e-02 weaklyHypermeth 4.7176e-01 insignificant 0.90117 0.92095 -0.0205776 6 0.89343 0.90296 -0.0095354 8.6900e-01 1.0418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7080e-01 8.1463e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0188389 4.4266e-01 insignificant 1.000000 insignificant 0.92513 0.7118644 0.14219955 8 0.91743 0.784077 0.1333514 1.7162e-09 9.9922e-01 weaklyHypermeth 8.1722e-08 1.000000 weaklyHypermeth 3.2706e-04 0.9998523 weaklyHypermeth 1.4246e-02 1 weaklyHypermeth 0.29017434 1.1938e-02 weaklyHypermeth 4.4216e-01 insignificant 0.92441 0.920949 -0.00082409 6 0.91935 0.90296 0.0163897 2.7798e-01 7.0991e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.4127e-01 0.6920304 insignificant 1.0000e+00 1 insignificant 0.0059752 0.7995989 insignificant 1 insignificant 0.6809986 0.920949 -0.2100477 6 0.6480155 0.90296 -0.25494656 0.9999936 5.9936e-06 hypomethylated 1 3.5257e-04 hypomethylated 0.9999933 1.9026e-04 hypomethylated 1 1.5855e-02 hypomethylated -0.2841992 1.2492e-02 weaklyHypometh 0.4626640 insignificant chr22 43756769 43757769 156103 ENSG00000220288 0.58643 210 7 0.71632 77 4 0.36017 90 5 0.80737 188 6 0.59538 61 3 0.60661 136 6 0.52621 41 3 0.74896 62 3 0.91515 44 2 0.58170 51 3 0.82686 65 3 0.48571 30 3 0.89621 75 3 1.00000 10 0 0.58831 66 3 0.30208 24 2 0.61908 79 5 0.54269 146 6 0.58292 76 5 0.75296 131 6 0.96071 43 2 0.685417 34 4 0.68866 129 7 0.84615 33 2 0.92143 39 4 0.76592 101 6 0.97778 31 2 1.00000 15 2 0.853571 38 3 0.59642 96 4 0.77875 70 6 0.75951 143 5 0.804960 88 3 0.6373626 38 3 0.63787851 112 6 0.708333 16 0 0.488095 33 3 0.7680960 72 4 0.802590 136 6 0.73608 182 6 0.77597 122 6 0.79543 119 6 0.835213 158 6 0.86543 0.84357 0.85113 0.91886 0.97994 0.95115 0.70106 0.90284 0.93626 0.94985 0.91867 0.67118 0.901685 0.90910 0.87907 0.30747 0.86157 0.91532 0.912666 0.97143 0.89967 0.699391 0.87462 0.95093 0.99142 0.96839 0.92054 0.99142 0.911330 0.92647 0.85047 0.90986 0.8053914 0.715517 0.6753968 0.89655 0.9117406 0.8804348 0.968711 0.90780 0.948229 0.914831 0.943695 1 0.77497 0.82642 -0.0207857 6 0.65554 0.75854 -0.1029989 0.96749 1.3356e-01 insignificant 1 1.0000000 insignificant 0.99644 7.1335e-02 insignificant 1 1.0000000 insignificant -0.1674696 0.0048071 lowCoverage 1 lowCoverage 0.77497 0.7186630 0.0918814 6 0.65554 0.640639 0.0149026 9.4026e-03 7.8517e-01 weaklyHypermeth 1.3243e-01 1.0000e+00 insignificant 4.2329e-01 7.9726e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0220635 7.2484e-01 lowCoverage 1.0000e+00 lowCoverage 0.77497 0.79079 -0.0571136 6 0.65554 0.78148 -0.1259337 9.9921e-01 3.6733e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9932e-01 2.5387e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.1369984 4.4719e-03 lowCoverage 0.711796 lowCoverage 0.82642 0.7186630 0.11251531 6 0.75854 0.640639 0.1179015 1.1684e-03 9.9111e-01 weaklyHypermeth 2.1637e-02 1.000000 weaklyHypermeth 1.1232e-01 0.9976624 insignificant 1.0000e+00 1 insignificant 0.14540609 3.1758e-02 lowCoverage 6.9040e-01 lowCoverage 0.82642 0.790795 -0.02763202 6 0.75854 0.78148 -0.0229349 9.0721e-01 1.3565e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.6167e-01 0.3097661 insignificant 1.0000e+00 1 insignificant 0.0304712 0.4656332 lowCoverage 1 lowCoverage 0.7186630 0.790795 -0.1450051 6 0.6406390 0.78148 -0.14083639 0.9853805 1.2835e-03 weaklyHypometh 1 3.5652e-02 weaklyHypometh 0.9985047 2.9828e-02 weaklyHypometh 1 6.3463e-01 insignificant -0.1149349 5.6500e-02 lowCoverage 1.0000000 lowCoverage chr22 44007729 44008729 156105 C22orf9 ENSG00000100364 0.88199 150 6 0.78679 194 6 0.88230 134 6 0.96924 162 5 0.79776 68 6 0.91638 196 6 0.83884 132 6 0.85469 121 6 0.83506 129 6 0.90471 142 6 0.82428 175 6 0.77154 83 6 0.94808 178 6 NA 0 0 0.83570 105 6 0.68934 68 5 0.89127 71 6 0.92880 133 5 0.86472 128 6 0.87348 155 6 0.84514 102 6 0.934676 87 4 0.87519 167 6 0.82208 108 6 0.85797 50 3 0.87449 139 6 0.81549 115 6 0.78696 99 6 0.870151 120 6 0.89760 173 6 0.87770 139 6 0.86812 234 6 0.812782 177 6 0.7274958 117 6 0.79375000 109 3 0.929293 45 4 0.844688 111 6 0.8866407 166 6 0.915042 170 6 0.91844 200 6 0.86566 120 6 0.89023 149 6 0.973636 182 5 0.88191 0.78165 0.88695 0.96059 0.81256 0.91100 0.86685 0.87161 0.82182 0.90408 0.81949 0.78138 0.941277 NA 0.84515 0.72972 0.87965 0.90951 0.851422 0.87107 0.86631 0.910483 0.88478 0.82115 0.85098 0.87836 0.78801 0.80640 0.890283 0.87715 0.88710 0.85873 0.7978653 0.707340 0.7651082 0.90960 0.8341928 0.8850575 0.900450 0.91774 0.874517 0.872879 0.969350 4 0.86212 0.86954 -0.0088373 6 0.85908 0.86806 -0.0089743 0.72152 2.0401e-01 insignificant 1 1.0000000 insignificant 0.75837 2.8953e-01 insignificant 1 1.0000000 insignificant -0.0028335 0.8830046 insignificant 1 insignificant 0.86212 0.8193103 0.0335936 6 0.85908 0.844286 0.0147989 1.7583e-01 4.5566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5761e-01 3.9339e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0251893 4.6572e-01 insignificant 1.0000e+00 insignificant 0.86212 0.91230 -0.0465323 6 0.85908 0.91351 -0.0544297 9.9806e-01 7.4380e-03 weaklyHypometh 1.0000e+00 8.2708e-01 insignificant 9.9834e-01 9.9445e-03 weaklyHypometh 1.0000e+00 0.8268594 insignificant -0.0549690 4.0933e-02 weaklyHypometh 1.000000 insignificant 0.86954 0.8193103 0.04015786 6 0.86806 0.844286 0.0237732 1.1532e-01 3.2068e-01 insignificant 1.0000e+00 1.000000 insignificant 5.4995e-01 0.2723368 insignificant 1.0000e+00 1 insignificant 0.02802276 4.0086e-01 insignificant 1.0000e+00 insignificant 0.86954 0.912302 -0.03910344 6 0.86806 0.91351 -0.0454554 9.8454e-01 4.1418e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9101e-01 0.0654909 insignificant 1.0000e+00 1 insignificant -0.0521355 0.0421777 weaklyHypometh 1 insignificant 0.8193103 0.912302 -0.0838292 6 0.8442857 0.91351 -0.06922857 0.9754680 2.8149e-02 weaklyHypometh 1 5.1180e-01 insignificant 0.9952452 1.4666e-01 insignificant 1 1.0000e+00 insignificant -0.0801583 4.6784e-02 weaklyHypometh 1.0000000 insignificant chr22 44102255 44103255 156106 FAM118A ENSG00000100376 0.91971 1177 15 0.89203 362 16 0.88249 130 9 0.92318 451 15 0.83444 124 10 0.88490 1466 16 0.83690 86 9 0.91748 1712 15 0.91668 437 15 0.87539 239 14 0.91675 2214 16 0.88690 51 3 0.96444 1711 15 1.00000 34 3 0.91596 354 15 0.90741 17 0 0.93333 31 3 0.92212 1858 15 0.96796 777 15 0.96965 156 10 0.94085 288 11 0.881401 544 12 0.91189 252 11 0.75298 113 10 0.91860 988 16 0.90370 1506 16 0.86783 352 11 0.83333 16 0 0.946114 527 15 0.96603 1986 16 0.96619 1378 16 0.92900 1775 16 0.947337 303 14 0.9818875 388 16 0.96201600 740 16 0.972930 128 9 0.918127 464 15 0.9158243 1443 16 0.976157 292 13 0.98921 850 16 0.96490 475 16 0.96585 903 14 0.962693 650 15 0.90764 0.89880 0.88774 0.91348 0.85456 0.93973 0.81665 0.91345 0.91682 0.94231 0.93216 0.79528 0.954570 0.95799 0.91324 0.92324 0.85870 0.94552 0.966715 0.92606 0.95227 0.932632 0.93243 0.95889 0.96243 0.95058 0.96431 0.94808 0.959938 0.95954 0.96066 0.93473 0.9458021 0.981469 0.9499624 0.96009 0.9831027 0.9582911 0.965369 0.98700 0.958844 0.975533 0.959510 3 0.93016 0.94570 -0.0154701 15 0.90317 0.90493 -0.0017620 0.99981 1.5350e-03 weaklyHypometh 1 0.2192898 insignificant 0.99971 1.2042e-02 weaklyHypometh 1 1.0000000 insignificant 0.0118938 0.5601072 insignificant 1 insignificant 0.93016 0.9636364 -0.0351980 15 0.90317 0.911684 -0.0085147 1.0000e+00 6.6798e-10 weaklyHypometh 1.0000e+00 6.6798e-07 weaklyHypometh 1.0000e+00 7.7331e-07 weaklyHypometh 1.0000e+00 0.00038666 weaklyHypometh -0.0363000 2.9025e-02 weaklyHypometh 6.7499e-01 insignificant 0.93028 0.96814 -0.0395179 15 0.92837 0.96879 -0.0404210 9.9996e-01 1.2327e-10 weaklyHypometh 1.0000e+00 1.2327e-07 weaklyHypometh 9.9999e-01 1.4702e-06 weaklyHypometh 1.0000e+00 0.0014702 weaklyHypometh -0.0583756 1.3920e-05 weaklyHypometh 0.013920 weaklyHypometh 0.94560 0.9633583 -0.01746473 15 0.85466 0.861035 -0.0063775 9.9841e-01 5.7269e-05 weaklyHypometh 1.0000e+00 0.057269 weaklyHypometh 1.0000e+00 0.0039220 weaklyHypometh 1.0000e+00 1 insignificant -0.04819380 3.5820e-02 weaklyHypometh 7.4829e-01 insignificant 0.94599 0.968139 -0.02375756 15 0.94586 0.96879 -0.0229238 9.9941e-01 5.7034e-06 weaklyHypometh 1.0000e+00 0.0057034 weaklyHypometh 9.9889e-01 0.0015461 weaklyHypometh 1.0000e+00 1 insignificant -0.0702694 0.0022231 weaklyHypometh 1 insignificant 0.9639145 0.968139 -0.0010712 16 0.9686644 0.96879 -0.00012413 0.3632504 3.8685e-01 insignificant 1 1.0000e+00 insignificant 0.7902117 6.8909e-01 insignificant 1 1.0000e+00 insignificant -0.0220756 1.1961e-01 insignificant 1.0000000 insignificant chr22 44693700 44694700 156121 ENSG00000219324 0.92838 460 14 0.83755 542 14 0.83615 333 14 0.86178 481 14 0.83198 286 14 0.93635 409 15 0.79628 252 14 0.85922 442 15 0.84617 348 14 0.91381 392 14 0.86865 566 15 0.78589 250 11 0.84269 462 14 0.94614 240 10 0.90755 532 16 0.70153 198 14 0.38591 54 3 0.90997 482 14 0.88512 635 15 0.73610 344 15 0.78173 189 14 0.872658 263 13 0.94290 270 14 0.96059 105 5 0.88182 193 12 0.88922 519 14 0.89355 349 14 0.82043 250 14 0.847996 437 14 0.95524 755 14 0.88947 453 14 0.93349 433 14 0.724046 335 14 0.6266500 269 15 0.86285714 275 13 0.738421 162 11 0.651042 260 14 0.7682370 432 14 0.946406 469 14 0.94414 479 14 0.93772 331 13 0.94968 396 13 0.798226 445 14 0.92836 0.83850 0.90070 0.85494 0.87783 0.92264 0.85225 0.92185 0.85609 0.92492 0.87141 0.87842 0.881753 0.93934 0.90657 0.71218 0.34183 0.91810 0.939366 0.76074 0.88136 0.887281 0.94439 0.95606 0.93343 0.92949 0.89590 0.89212 0.920944 0.95152 0.96207 0.95124 0.7465511 0.718006 0.8527267 0.73672 0.7753892 0.8037350 0.943845 0.93928 0.923512 0.952899 0.930298 10 0.88998 0.92572 -0.0363695 14 0.79330 0.85160 -0.0582960 0.95624 5.0333e-04 weaklyHypometh 1 0.1052815 insignificant 0.96244 4.3365e-06 weaklyHypometh 1 0.0043365 weaklyHypometh -0.0582304 0.0762155 insignificant 1 insignificant 0.88998 0.7593768 0.1231532 14 0.79330 0.668957 0.1243449 3.9647e-19 8.9357e-01 weaklyHypermeth 5.6638e-17 1.0000e+00 weaklyHypermeth 8.5340e-04 6.5055e-01 weaklyHypermeth 2.8447e-02 1.00000000 weaklyHypermeth 0.1023192 3.9330e-02 weaklyHypermeth 8.1938e-01 insignificant 0.89022 0.94245 -0.0489486 13 0.83997 0.83054 0.0094281 9.1418e-01 7.4437e-03 weaklyHypometh 1.0000e+00 8.2708e-01 insignificant 9.9995e-01 2.0426e-04 weaklyHypometh 1.0000e+00 0.0680881 weaklyHypometh -0.0843718 5.7245e-02 insignificant 1.000000 insignificant 0.92572 0.7593768 0.15899145 14 0.85160 0.668957 0.1826409 8.9326e-18 1.0000e+00 weaklyHypermeth 1.4888e-15 1.000000 weaklyHypermeth 1.3639e-04 0.9992721 weaklyHypermeth 7.5771e-03 1 weaklyHypermeth 0.16054954 3.8072e-03 weaklyHypermeth 2.2343e-01 insignificant 0.92593 0.942453 -0.01216920 13 0.87228 0.83054 0.0417415 8.7166e-01 2.5591e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.8796e-01 0.3965076 insignificant 1.0000e+00 1 insignificant -0.0261414 0.4599166 insignificant 1 insignificant 0.7596765 0.942453 -0.1572696 13 0.6788957 0.83054 -0.15164296 0.9998794 4.3602e-09 weaklyHypometh 1 4.8447e-07 weaklyHypometh 0.9809701 7.5466e-04 weaklyHypometh 1 5.0310e-02 weaklyHypometh -0.1866910 2.6558e-03 weaklyHypometh 0.1686767 insignificant chr22 44734718 44735718 156123 ENSG00000219324 0.83946 290 10 0.69853 251 10 0.88832 266 10 0.82471 342 9 0.82152 229 10 0.78384 427 10 0.72281 298 10 0.62249 211 9 0.77481 274 10 0.87853 207 10 0.81725 428 10 0.74593 253 10 0.72200 311 10 0.79821 99 4 0.71400 274 10 0.80261 253 10 0.64800 189 8 0.70460 360 6 0.77064 283 10 0.72676 325 9 0.84296 161 10 0.524932 165 6 0.80442 245 10 0.81254 169 10 0.61147 137 6 0.72430 315 10 0.66918 214 10 0.58349 133 8 0.775937 239 10 0.84948 292 10 0.83700 229 9 0.90966 338 9 0.761553 263 10 0.3900280 267 10 0.55662393 244 9 0.792298 91 6 0.589812 420 11 0.7525503 246 8 0.726041 278 6 0.75892 272 9 0.85379 205 9 0.64348 260 6 0.863015 347 9 0.82172 0.74762 0.87891 0.80981 0.80886 0.85820 0.78752 0.73325 0.77194 0.86591 0.88496 0.75356 0.649033 0.74942 0.74146 0.89272 0.67446 0.66336 0.771649 0.81535 0.81045 0.462354 0.82640 0.82645 0.70429 0.77718 0.75271 0.78211 0.833139 0.82894 0.79356 0.90635 0.6089053 0.367347 0.3576707 0.53061 0.5604024 0.7415103 0.776256 0.65072 0.757025 0.667250 0.788583 6 0.78276 0.79181 -0.0025386 10 0.77412 0.73334 0.0407743 0.67031 7.2875e-01 insignificant 1 1.0000000 insignificant 0.69555 7.6309e-01 insignificant 1 1.0000000 insignificant 0.0198044 0.6154761 insignificant 1 insignificant 0.78276 0.5388635 0.2405039 10 0.77412 0.572473 0.2016462 5.1185e-12 9.9998e-01 hypermethylated 2.6939e-10 1.0000e+00 hypermethylated 2.2653e-03 8.8749e-01 weaklyHypermeth 5.6632e-02 1.00000000 weaklyHypermeth 0.1247733 1.1021e-01 insignificant 1.0000e+00 insignificant 0.78269 0.77606 0.0518323 8 0.75530 0.73472 0.0205774 1.7964e-01 1.2899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6562e-01 1.2286e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0037981 9.3446e-01 insignificant 1.000000 insignificant 0.79181 0.5388635 0.25185519 10 0.73334 0.572473 0.1608719 9.8941e-08 9.9946e-01 hypermethylated 3.8054e-06 1.000000 hypermethylated 1.9315e-02 0.9162777 weaklyHypermeth 3.7145e-01 1 insignificant 0.10496893 1.8760e-01 insignificant 1.0000e+00 insignificant 0.79225 0.776065 0.05520380 8 0.75279 0.73472 0.0180719 3.8040e-01 3.8939e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.9199e-01 0.4729128 insignificant 1.0000e+00 1 insignificant -0.0236025 0.6718192 insignificant 1 insignificant 0.5395683 0.776065 -0.2026129 8 0.6201786 0.73472 -0.11453933 0.9999999 5.2145e-04 hypomethylated 1 1.6821e-02 hypomethylated 0.9993366 4.0856e-02 weaklyHypometh 1 8.1121e-01 insignificant -0.1285714 1.2803e-01 insignificant 1.0000000 insignificant chr22 44741262 44742262 156124 ENSG00000219324 0.52889 226 8 0.50465 143 10 0.78793 148 10 0.43340 189 7 0.47574 93 7 0.51820 278 9 0.58042 115 9 0.69370 195 10 0.69530 125 10 0.59247 168 10 0.81042 245 10 0.75132 67 7 0.51854 204 10 0.42175 76 5 0.44381 183 10 0.68419 46 5 0.67311 40 3 0.57840 186 8 0.79995 197 10 0.43121 234 10 0.55557 144 10 0.421613 150 7 0.60849 153 10 0.53953 155 10 0.42250 81 8 0.50911 262 10 0.51729 231 10 0.50356 101 10 0.605398 137 9 0.41972 278 10 0.63471 211 10 0.87136 218 9 0.529989 210 10 0.6465455 221 10 0.41146424 258 8 0.568305 80 6 0.469709 136 11 0.6843525 227 9 0.305651 204 9 0.53370 196 8 0.39347 174 7 0.49917 232 9 0.421345 212 8 0.55064 0.54189 0.77808 0.45213 0.45170 0.47091 0.56212 0.68705 0.65768 0.59437 0.79016 0.77711 0.550053 0.62057 0.47028 0.63058 0.65025 0.62152 0.794760 0.41525 0.69179 0.455432 0.65340 0.58416 0.50583 0.56674 0.63174 0.60581 0.675444 0.46301 0.66229 0.84379 0.5147689 0.678967 0.4264815 0.56180 0.6150982 0.7520479 0.332013 0.52120 0.409149 0.555708 0.491641 6 0.58220 0.57650 -0.0024141 10 0.65272 0.53510 0.1176142 0.12700 4.6615e-01 insignificant 1 1.0000000 insignificant 0.45585 6.2567e-01 insignificant 1 1.0000000 insignificant 0.0454317 0.3385645 insignificant 1 insignificant 0.58220 0.5680212 0.0143573 10 0.65272 0.490662 0.1620530 2.0508e-03 1.5366e-01 weaklyHypermeth 3.2553e-02 1.0000e+00 weaklyHypermeth 1.9597e-01 6.1298e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0444426 4.0801e-01 insignificant 1.0000e+00 insignificant 0.58167 0.56876 0.1128934 8 0.58326 0.45503 0.1282295 9.7529e-06 9.6933e-01 weaklyHypermeth 1.2810e-03 1.0000e+00 weaklyHypermeth 2.1684e-05 9.9033e-01 weaklyHypermeth 5.4210e-03 1.0000000 weaklyHypermeth 0.1655039 9.1133e-03 weaklyHypermeth 0.867511 insignificant 0.57650 0.5680212 0.02771707 10 0.53510 0.490662 0.0444388 6.7643e-02 1.3502e-01 insignificant 8.7848e-01 1.000000 insignificant 2.1371e-01 0.7429132 insignificant 1.0000e+00 1 insignificant -0.00098907 9.8610e-01 insignificant 1.0000e+00 insignificant 0.57852 0.568762 0.12900290 8 0.57485 0.45503 0.1198197 6.1835e-06 9.9710e-01 weaklyHypermeth 1.2367e-03 1.0000000 weaklyHypermeth 4.5213e-05 0.9998663 weaklyHypermeth 1.2937e-02 1 weaklyHypermeth 0.1200722 0.0492591 weaklyHypermeth 1 insignificant 0.5716830 0.568762 0.1115392 8 0.5745090 0.45503 0.11948016 0.0020493 9.6656e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0222252 9.9762e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.1210612 6.8178e-02 insignificant 1.0000000 insignificant chr22 44830256 44831256 156125 C22orf26 ENSG00000182257 0.83178 220 6 0.88275 125 6 0.54683 53 3 0.84630 142 6 0.74286 37 4 0.89950 247 6 0.66667 23 1 0.88464 104 6 0.83148 57 6 0.97075 77 6 0.86702 192 6 0.88333 23 2 0.90430 109 6 NA 0 0 0.88743 76 6 0.83333 15 2 0.85354 32 3 0.86598 190 6 0.80733 90 6 0.92925 172 6 0.86039 68 6 0.740741 92 6 0.91583 140 6 0.90365 77 6 0.90093 77 6 0.84706 132 6 0.77010 123 6 0.88889 15 2 0.675386 75 6 0.94304 167 6 0.88880 141 6 0.88198 226 6 0.019817 170 6 0.0360119 125 6 0.14285714 266 5 0.000000 140 6 0.015152 77 6 0.0000000 198 6 0.543019 137 6 0.86074 254 6 0.83441 154 6 0.81703 183 6 0.687830 173 6 0.82973 0.86943 0.58036 0.83673 0.70476 0.87769 0.75000 0.84762 0.79402 0.95826 0.88037 0.89328 0.885817 NA 0.88332 0.78151 0.83881 0.87834 0.798982 0.92137 0.79698 0.735387 0.90282 0.91494 0.85720 0.83353 0.87826 0.88702 0.748246 0.94102 0.85811 0.87545 0.0222872 0.049850 0.0000000 0.00000 0.0076394 0.0000000 0.630254 0.81432 0.835168 0.779067 0.624815 2 0.86492 0.87022 -0.0061766 6 0.85119 0.85438 -0.0031923 0.76925 4.2154e-01 insignificant 1 1.0000000 insignificant 0.54490 7.5750e-01 insignificant 1 1.0000000 insignificant -0.0127137 0.6958515 lowCoverage 1 lowCoverage 0.86492 0.0092213 0.8544987 6 0.85119 0.080869 0.7703164 6.4800e-85 1.0000e+00 hypermethylated 3.2400e-82 1.0000e+00 hypermethylated 2.1952e-16 1.0000e+00 hypermethylated 7.3173e-14 1.00000000 hypermethylated 0.8030479 3.0698e-14 lowCoverage 3.0698e-11 lowCoverage 0.86492 0.78246 0.0996801 6 0.85119 0.73754 0.1136497 3.4117e-05 9.9933e-01 weaklyHypermeth 3.4117e-03 1.0000e+00 weaklyHypermeth 2.4998e-04 9.9916e-01 weaklyHypermeth 4.1664e-02 1.0000000 weaklyHypermeth 0.0900838 2.1285e-01 lowCoverage 1.000000 lowCoverage 0.87022 0.0092213 0.86271704 6 0.85438 0.080869 0.7735087 6.5874e-67 1.0000e+00 hypermethylated 6.5874e-64 1.000000 hypermethylated 3.8698e-14 1.0000000 hypermethylated 1.2899e-11 1 hypermethylated 0.81576154 2.8885e-13 hypermethylated 2.8885e-10 hypermethylated 0.87022 0.782464 0.10528496 6 0.85438 0.73754 0.1168420 4.2336e-05 9.9626e-01 weaklyHypermeth 4.7040e-03 1.0000000 weaklyHypermeth 3.6928e-04 0.9974431 weaklyHypermeth 5.2754e-02 1 weaklyHypermeth 0.1027975 0.1649656 insignificant 1 insignificant 0.0092213 0.782464 -0.7769029 6 0.0808692 0.73754 -0.65666671 0.9999917 9.2556e-38 hypomethylated 1 9.2556e-35 hypomethylated 0.9999997 7.3488e-10 hypomethylated 1 2.4496e-07 hypomethylated -0.7129641 8.4796e-05 hypomethylated 0.0211991 hypomethylated chr22 45772249 45773249 156136 ENSG00000221672 0.91920 440 11 0.85555 280 12 0.82354 124 7 0.97273 498 11 0.90241 101 7 0.90238 531 12 0.83656 125 11 0.91121 202 12 0.90907 155 7 0.89180 180 7 0.88911 362 11 0.85985 75 6 0.90693 285 12 0.91017 108 10 0.96554 196 11 0.87500 18 0 0.73929 46 6 0.90580 521 7 0.86517 236 7 0.91086 368 12 0.86133 105 10 0.861001 140 6 0.89660 222 11 0.94444 60 3 0.96875 85 7 0.88561 391 11 0.88004 129 8 0.74337 56 7 0.908047 275 8 0.97055 350 11 0.97285 340 11 0.95977 501 12 0.891297 286 11 0.9653853 194 7 1.00000000 33 4 0.957963 74 3 0.902034 100 8 0.8386111 335 11 0.896842 396 11 0.93665 586 11 0.89785 454 11 0.87801 506 7 0.888443 550 11 0.89861 0.89876 0.88961 0.96242 0.89215 0.91827 0.88716 0.95818 0.93092 0.93855 0.92819 0.88990 0.924657 0.89861 0.94446 0.99936 0.86521 0.93040 0.909492 0.94312 0.82942 0.837923 0.93668 0.96111 0.96191 0.96814 0.88848 0.75810 0.917720 0.96954 0.95457 0.93351 0.9236217 0.988467 0.9312437 0.94881 0.9379960 0.8291944 0.887416 0.90769 0.913930 0.934556 0.891975 4 0.92290 0.93142 -0.0094000 11 0.88858 0.91758 -0.0290001 0.98473 2.9299e-02 weaklyHypometh 1 1.0000000 insignificant 0.98214 1.4448e-01 insignificant 1 1.0000000 insignificant -0.0167551 0.4612579 insignificant 1 insignificant 0.92290 0.9119374 0.0062822 11 0.88858 0.894600 -0.0060159 6.0435e-01 1.0703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9341e-01 2.3963e-02 inconclusive 1.0000e+00 1.00000000 insignificant -0.0382726 1.9216e-01 insignificant 1.0000e+00 insignificant 0.92290 0.91091 0.0170874 11 0.88858 0.90064 -0.0120516 3.6047e-02 7.2626e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.2132e-03 9.0677e-01 weaklyHypermeth 2.4591e-01 1.0000000 insignificant -0.0119503 4.3948e-01 insignificant 1.000000 insignificant 0.93142 0.9119374 0.01236660 11 0.91758 0.894600 0.0229842 1.0890e-01 8.2424e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1169e-01 0.2825000 insignificant 1.0000e+00 1 insignificant -0.02151749 4.9926e-01 insignificant 1.0000e+00 insignificant 0.93142 0.910915 0.02626457 11 0.91758 0.90064 0.0169485 2.3564e-05 9.7590e-01 weaklyHypermeth 3.3662e-03 1.0000000 weaklyHypermeth 5.3010e-05 0.9991671 weaklyHypermeth 1.2937e-02 1 weaklyHypermeth 0.0048048 0.8270150 insignificant 1 insignificant 0.9119374 0.910915 0.0057893 11 0.8946002 0.90064 -0.00603571 0.0370641 8.8156e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0010904 9.9856e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0263223 3.4861e-01 insignificant 1.0000000 insignificant chr22 45944187 45945187 156140 ENSG00000221672 0.90345 116 5 0.87257 902 5 0.90947 609 5 0.90859 191 5 0.91746 823 5 0.90756 280 5 0.87889 649 5 0.89216 181 5 0.87090 711 5 0.93051 491 5 0.94324 756 5 0.90702 842 5 0.96259 301 5 0.87619 52 2 0.92000 214 5 0.81038 333 5 0.77285 512 5 0.93709 335 5 0.95097 165 5 0.90221 224 5 0.92009 262 5 0.957553 79 5 0.91281 370 5 0.94196 206 5 0.90522 68 4 0.94464 1032 5 0.90915 263 5 0.94979 457 5 0.902680 1028 5 0.93876 661 5 0.94265 579 5 0.89192 266 5 0.939514 773 5 0.9552042 432 5 0.94074111 648 5 0.978363 60 4 0.963367 278 5 0.9361537 582 5 0.908889 168 5 0.97573 326 5 0.94907 159 5 0.94693 248 5 0.923013 315 5 0.89845 0.87405 0.90136 0.91731 0.91529 0.91021 0.86948 0.89966 0.86611 0.92425 0.93705 0.89256 0.956819 0.89223 0.91095 0.82086 0.76054 0.92180 0.945032 0.91288 0.92935 0.951054 0.89485 0.94825 0.88202 0.94882 0.89732 0.94464 0.921499 0.94171 0.93951 0.90658 0.9482991 0.955552 0.9432663 0.97463 0.9578736 0.9386305 0.907427 0.97184 0.938805 0.957630 0.923036 5 0.89340 0.93132 -0.0380405 5 0.89757 0.92947 -0.0319014 0.99681 4.5315e-06 weaklyHypometh 1 0.0045315 weaklyHypometh 0.99958 2.0011e-03 weaklyHypometh 1 0.6670488 insignificant -0.0277307 0.0266314 lowCoverage 1 lowCoverage 0.89340 0.9473494 -0.0533711 5 0.89757 0.945425 -0.0478588 9.9976e-01 3.3621e-06 weaklyHypometh 1.0000e+00 1.6811e-03 weaklyHypometh 1.0000e+00 7.1348e-07 weaklyHypometh 1.0000e+00 0.00038666 weaklyHypometh -0.0535190 2.0788e-04 lowCoverage 2.0788e-02 lowCoverage 0.89340 0.94490 -0.0520086 5 0.89757 0.94314 -0.0455716 9.9976e-01 1.2416e-04 weaklyHypometh 1.0000e+00 4.1387e-02 weaklyHypometh 9.9997e-01 1.8786e-04 weaklyHypometh 1.0000e+00 0.0680881 weaklyHypometh -0.0420210 1.8978e-02 lowCoverage 1.000000 lowCoverage 0.93132 0.9473494 -0.01617767 5 0.92947 0.945425 -0.0159573 9.9502e-01 2.1834e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9719e-01 0.0031675 weaklyHypometh 1.0000e+00 1 insignificant -0.02578823 1.5219e-02 lowCoverage 4.6867e-01 lowCoverage 0.93132 0.944901 -0.01356502 5 0.92947 0.94314 -0.0136701 9.5943e-01 1.4001e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8619e-01 0.1710376 insignificant 1.0000e+00 1 insignificant -0.0142902 0.3153183 lowCoverage 1 lowCoverage 0.9473494 0.944901 0.0034058 5 0.9454251 0.94314 0.00228719 0.5231152 7.5708e-01 insignificant 1 1.0000e+00 insignificant 0.4454233 8.9528e-01 insignificant 1 1.0000e+00 insignificant 0.0114980 4.1981e-01 lowCoverage 1.0000000 lowCoverage chr22 46769010 46770010 156162 ENSG00000216847 0.83415 304 8 0.85143 168 6 0.66183 160 10 0.67595 274 8 0.89978 95 6 0.87858 300 7 0.70699 176 6 0.85419 211 7 0.76680 185 6 0.85872 191 6 0.88577 260 12 0.84747 116 6 0.95156 272 12 0.90278 33 4 0.87984 157 6 0.82606 78 6 0.74507 95 5 0.84071 381 11 0.91573 151 11 0.87058 251 7 0.72894 71 7 0.807773 163 7 0.75268 179 6 0.78403 144 9 0.93500 101 9 0.96977 310 12 0.79616 175 10 0.90258 132 6 0.765792 221 11 0.94112 289 12 0.90491 278 12 0.88960 391 12 0.566648 260 6 0.5845650 250 12 0.75000000 110 3 0.514262 118 12 0.784545 139 6 0.7075907 323 12 0.457833 275 6 0.77753 308 12 0.81415 284 5 0.85120 320 5 0.755730 315 11 0.84355 0.82979 0.78542 0.90439 0.92971 0.86990 0.82559 0.91834 0.87867 0.88572 0.83902 0.93965 0.945983 0.89824 0.87101 0.86503 0.92300 0.88142 0.953700 0.90787 0.85245 0.875523 0.89574 0.87763 0.90802 0.97082 0.88042 0.90219 0.776229 0.96900 0.95702 0.92331 0.5854866 0.291047 0.9153230 0.39307 0.6514134 0.6729760 0.844259 0.86838 0.801845 0.931041 0.857960 5 0.86755 0.88712 -0.0225307 6 0.85248 0.86882 -0.0163399 0.97474 1.1036e-01 insignificant 1 1.0000000 insignificant 0.93148 1.6127e-01 insignificant 1 1.0000000 insignificant -0.0154967 0.6122317 insignificant 1 insignificant 0.86755 0.6558333 0.2256487 6 0.85248 0.673508 0.1789728 1.6754e-14 9.9999e-01 hypermethylated 1.2888e-12 1.0000e+00 hypermethylated 6.2100e-07 1.0000e+00 hypermethylated 7.4903e-05 1.00000000 hypermethylated 0.1814309 7.9776e-03 weaklyHypermeth 2.9547e-01 insignificant 0.86755 0.84354 0.0364617 6 0.85248 0.76192 0.0905626 1.0273e-03 9.8535e-01 weaklyHypermeth 8.5607e-02 1.0000e+00 weaklyHypermeth 9.0294e-03 9.7167e-01 weaklyHypermeth 7.9191e-01 1.0000000 insignificant 0.1014112 2.2656e-01 insignificant 1.000000 insignificant 0.88712 0.6558333 0.23716283 12 0.86882 0.673508 0.1953127 1.9871e-10 1.0000e+00 hypermethylated 1.1689e-08 1.000000 hypermethylated 3.8064e-07 0.9999991 hypermethylated 6.3144e-05 1 hypermethylated 0.19692759 4.9121e-03 weaklyHypermeth 2.3391e-01 insignificant 0.88712 0.843542 0.06143020 7 0.86882 0.76192 0.1069026 2.4035e-04 9.9986e-01 weaklyHypermeth 1.8488e-02 1.0000000 weaklyHypermeth 8.4280e-03 0.9998885 weaklyHypermeth 6.8819e-01 1 insignificant 0.1169079 0.1767721 insignificant 1 insignificant 0.6558333 0.843542 -0.1972317 7 0.6735078 0.76192 -0.08841017 0.8148659 2.9254e-03 weaklyHypometh 1 6.9652e-02 weaklyHypometh 0.9493453 8.9385e-03 weaklyHypometh 1 2.4829e-01 insignificant -0.0800197 3.6976e-01 insignificant 1.0000000 insignificant chr22 47330409 47331409 156176 ENSG00000215322 0.91873 175 5 0.86616 150 5 0.72977 82 5 0.93417 181 5 0.94738 58 5 0.77043 204 5 0.69113 98 5 0.82226 69 5 0.83908 62 4 0.93953 73 5 0.91808 156 5 0.87556 25 3 0.94233 71 4 0.93750 31 3 0.92351 59 4 1.00000 18 2 0.58974 21 2 0.80198 205 5 0.87822 150 4 0.87603 186 5 1.00000 31 2 0.719753 48 4 0.94225 102 5 0.83983 64 5 0.83472 91 2 0.88697 165 5 0.81944 31 3 0.78268 54 5 0.807870 179 4 0.94832 176 5 0.90959 185 5 0.91605 190 5 0.711484 177 5 0.7815359 86 5 0.79202899 142 4 0.613770 82 2 0.656874 122 5 0.5543229 231 5 0.791515 200 5 0.86674 176 5 0.88683 137 4 0.92218 197 5 0.778148 162 5 0.89812 0.86299 0.81468 0.90456 0.94194 0.90500 0.88134 0.82984 0.83916 0.91499 0.93688 0.81995 0.929526 0.94269 0.90948 1.00000 0.67604 0.81008 0.858013 0.88486 1.00000 0.843471 0.93411 0.92094 0.94702 0.88844 0.79785 0.80236 0.869843 0.97333 0.92881 0.91078 0.6124521 0.678916 0.6252481 0.49937 0.8053303 0.4027309 0.717795 0.86577 0.857078 0.887863 0.741863 1 0.87753 0.90426 -0.0277525 5 0.73729 0.68780 0.0494887 0.95050 1.5502e-01 insignificant 1 1.0000000 insignificant 0.96338 3.8209e-01 insignificant 1 1.0000000 insignificant -0.0072103 0.8256606 lowCoverage 1 lowCoverage 0.87795 0.6726190 0.2383256 5 0.84262 0.634360 0.2082590 2.4980e-09 9.9957e-01 hypermethylated 9.9920e-08 1.0000e+00 hypermethylated 2.2242e-03 9.9855e-01 weaklyHypermeth 5.6632e-02 1.00000000 weaklyHypermeth 0.1750768 3.6704e-03 lowCoverage 1.8456e-01 lowCoverage 0.87826 0.82913 0.0447566 5 0.87967 0.83356 0.0461060 1.8328e-03 4.4574e-01 weaklyHypermeth 1.4099e-01 1.0000e+00 insignificant 4.8515e-02 5.8576e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.0109961 7.6526e-01 lowCoverage 1.000000 lowCoverage 0.90411 0.6726190 0.24693105 5 0.64320 0.634360 0.0088434 5.5607e-07 1.0000e+00 hypermethylated 1.9860e-05 1.000000 hypermethylated 3.3207e-03 0.9994493 weaklyHypermeth 8.3620e-02 1 weaklyHypermeth 0.18228707 3.0131e-03 lowCoverage 2.1522e-01 lowCoverage 0.90549 0.829128 0.06273222 5 0.90048 0.83356 0.0669241 7.5587e-04 5.5788e-01 weaklyHypermeth 5.0391e-02 1.0000000 weaklyHypermeth 8.5240e-03 0.8928310 weaklyHypermeth 6.8819e-01 1 insignificant 0.0182064 0.6258821 lowCoverage 1 lowCoverage 0.6730310 0.829128 -0.1915712 5 0.6881038 0.83356 -0.14545659 0.9543368 1.5923e-03 weaklyHypometh 1 4.0008e-02 weaklyHypometh 0.9646989 6.4298e-03 weaklyHypometh 1 2.2172e-01 insignificant -0.1640807 7.6482e-03 lowCoverage 0.3186756 lowCoverage chr22 47875891 47876891 156182 ENSG00000205632 0.94355 121 5 0.95849 96 3 0.72195 63 5 0.98702 101 5 0.85714 33 3 0.70146 128 5 0.86931 73 3 0.89885 60 5 0.83547 98 5 0.92039 79 5 0.91740 88 5 0.86147 43 3 0.88036 109 5 0.91667 12 2 0.94432 81 5 0.95833 39 3 0.88506 51 3 0.87085 124 5 0.96875 55 3 0.72922 118 5 0.97778 29 3 0.796667 64 5 0.85682 80 5 0.98077 40 3 0.92528 59 4 0.91029 90 5 0.90387 71 4 0.66718 45 3 0.885606 78 3 0.77003 134 5 0.84111 99 5 0.92344 164 5 0.682025 85 5 0.7005495 70 3 0.00000000 3 0 0.676523 73 3 0.856944 58 5 0.4729422 140 5 0.898146 128 3 0.95011 147 3 0.94314 101 3 0.67041 138 3 0.851042 102 3 0.92351 0.92867 0.74445 0.97774 0.91083 0.83944 0.86087 0.92826 0.87733 0.89770 0.91092 0.86185 0.872333 NA 0.90806 0.94799 0.85651 0.92754 0.960990 0.91285 0.96644 0.805705 0.93052 0.97677 0.86560 0.86512 0.90419 0.95163 0.914963 0.92060 0.84653 0.87040 0.7651537 0.528579 NA 0.68511 0.8757457 0.5375550 0.825001 0.92254 0.903227 0.895571 0.770624 3 0.88740 0.90241 -0.0156438 5 0.79766 0.75466 0.0430011 0.43446 1.5729e-01 insignificant 1 1.0000000 insignificant 0.14304 3.0154e-01 insignificant 1 1.0000000 insignificant 0.0114002 0.7244771 lowCoverage 1 lowCoverage 0.88740 0.6526807 0.2319348 5 0.79766 0.509271 0.2883907 2.0281e-13 9.9999e-01 hypermethylated 1.2675e-11 1.0000e+00 hypermethylated 6.1356e-05 9.9998e-01 hypermethylated 3.6092e-03 1.00000000 hypermethylated 0.3164722 5.0184e-02 lowCoverage 9.8400e-01 lowCoverage 0.88740 0.87825 0.0085699 3 0.79766 0.76807 0.0295892 3.5130e-01 8.3971e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6197e-01 1.1622e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0187330 7.4437e-01 lowCoverage 1.000000 lowCoverage 0.90241 0.6526807 0.24801421 5 0.75466 0.509271 0.2453896 1.7393e-11 1.0000e+00 hypermethylated 1.3379e-09 1.000000 hypermethylated 3.6322e-04 0.9999869 hypermethylated 1.5134e-02 1 hypermethylated 0.30507195 5.6196e-02 lowCoverage 1.0000e+00 lowCoverage 0.90241 0.878247 0.02369932 3 0.75466 0.76807 -0.0134119 2.4089e-01 5.0984e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.7573e-01 0.2396854 lowCoverage 1.0000e+00 1 lowCoverage 0.0073328 0.9025833 lowCoverage 1 lowCoverage 0.6526807 0.878247 -0.2033958 3 0.5092706 0.76807 -0.25880144 1.0000000 2.9215e-06 lowCoverage 1 2.0868e-04 lowCoverage 0.9999999 5.3709e-03 lowCoverage 1 1.9892e-01 lowCoverage -0.2977391 6.3368e-02 lowCoverage 1.0000000 lowCoverage chr22 48497187 48498187 156195 C22orf34 ENSG00000188511 0.51733 335 8 0.34806 149 8 0.45470 210 8 0.57491 314 6 0.34110 68 5 0.70513 414 6 0.33895 175 6 0.33439 158 6 0.26435 103 6 0.63634 91 4 0.56105 137 6 0.66264 45 6 0.21311 120 4 0.28571 21 3 0.52262 122 6 0.74359 45 5 0.82967 53 4 0.47918 394 6 0.32107 136 6 0.11233 424 6 0.82202 65 6 0.493187 124 4 0.35419 188 6 0.26718 110 5 0.48448 271 6 0.74347 133 7 0.27249 102 6 0.38950 49 4 0.047851 134 6 0.26631 224 6 0.18000 225 6 0.81307 292 6 0.411081 198 6 0.1399604 159 6 0.50550000 137 9 0.562670 119 6 0.497278 130 6 0.3311192 197 6 0.533393 383 6 0.59451 313 8 0.38986 262 6 0.63514 337 6 0.551368 319 6 0.39669 0.30776 0.43345 0.39176 0.37996 0.62210 0.32750 0.33380 0.35727 0.37162 0.42505 0.71606 0.180404 0.36909 0.57203 0.65325 0.74932 0.34301 0.407090 0.10060 0.81977 0.415392 0.45715 0.37160 0.57539 0.60731 0.13897 0.47146 0.052037 0.14905 0.11894 0.82574 0.5078032 0.128717 0.4765334 0.49137 0.3272575 0.4136555 0.289803 0.58716 0.052015 0.463425 0.414358 3 0.38823 0.43558 -0.0491165 6 0.48959 0.43759 0.0520045 0.99374 3.6253e-01 insignificant 1 1.0000000 insignificant 0.76411 9.4633e-01 insignificant 1 1.0000000 insignificant 0.0344991 0.6881292 insignificant 1 insignificant 0.39470 0.4042553 -0.0201798 6 0.51793 0.416966 0.1009683 3.1429e-01 5.9247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9426e-01 9.5754e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0543770 4.9245e-01 insignificant 1.0000e+00 insignificant 0.39478 0.36493 0.0143731 6 0.54154 0.54402 -0.0024734 6.4290e-01 1.2791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3241e-01 6.5028e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0785423 2.1172e-01 insignificant 1.000000 insignificant 0.43596 0.4002146 0.02931050 6 0.45322 0.361460 0.0917612 6.6893e-01 9.6369e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6313e-01 0.9353161 insignificant 1.0000e+00 1 insignificant 0.01987787 8.3922e-01 insignificant 1.0000e+00 insignificant 0.43684 0.361371 0.05948023 6 0.51053 0.49842 0.0121154 4.9357e-01 8.5290e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7860e-01 0.8714526 insignificant 1.0000e+00 1 insignificant -0.1130414 0.1978465 insignificant 1 insignificant 0.4049946 0.364932 0.0449926 6 0.4094714 0.54402 -0.13454366 0.8618319 2.5098e-01 insignificant 1 1.0000e+00 insignificant 0.9562611 5.8368e-01 insignificant 1 1.0000e+00 insignificant -0.1329193 1.1507e-01 insignificant 1.0000000 insignificant chr22 49086124 49087124 156196 PLXNB2 ENSG00000196576 0.38627 522 13 0.27459 910 14 0.28630 651 14 0.19210 694 11 0.30896 725 14 0.38954 787 14 0.29276 841 14 0.28135 776 14 0.25946 1038 14 0.40254 895 14 0.45236 740 14 0.33920 530 14 0.11732 835 14 0.32756 524 11 0.23083 931 14 0.24991 415 14 0.14674 291 10 0.19124 859 13 0.17198 930 14 0.14568 791 13 0.32967 346 14 0.072794 403 9 0.34226 565 14 0.36043 383 13 0.24714 282 9 0.24941 1046 14 0.20919 554 13 0.21884 415 13 0.254073 836 14 0.19101 1179 14 0.16974 1053 14 0.47055 783 14 0.002588 849 14 0.0079183 683 14 0.00085034 706 13 0.000000 91 7 0.048895 620 14 0.0077466 1002 14 0.091219 847 13 0.12137 892 13 0.19449 531 11 0.18770 777 11 0.090196 632 13 0.29186 0.20744 0.25874 0.22762 0.20978 0.35704 0.24279 0.18459 0.19271 0.24783 0.38579 0.25205 0.066442 0.32168 0.14110 0.22927 0.14608 0.20689 0.087602 0.14029 0.32006 0.049176 0.28087 0.25745 0.21528 0.17067 0.16910 0.20240 0.232447 0.11055 0.10644 0.37304 0.0024453 0.008081 0.0019506 0.00000 0.0114093 0.0020066 0.065088 0.05390 0.081202 0.055086 0.085028 11 0.24893 0.21797 0.0205246 14 0.23700 0.23852 -0.0015216 0.21999 9.9043e-01 insignificant 1 1.0000000 insignificant 0.53899 9.9354e-01 insignificant 1 1.0000000 insignificant 0.0127424 0.7309433 insignificant 1 insignificant 0.24891 0.0058213 0.2476797 14 0.25773 0.039689 0.2180454 1.4911e-52 1.0000e+00 hypermethylated 3.7278e-50 1.0000e+00 hypermethylated 1.2670e-32 1.0000e+00 hypermethylated 1.2670e-29 1.00000000 hypermethylated 0.2610018 3.9842e-11 hypermethylated 1.9921e-08 hypermethylated 0.24910 0.06904 0.1610308 12 0.28624 0.20109 0.0851506 3.1652e-23 1.0000e+00 weaklyHypermeth 3.1652e-20 1.0000e+00 weaklyHypermeth 1.2520e-19 1.0000e+00 weaklyHypermeth 1.2520e-16 1.0000000 weaklyHypermeth 0.1353405 9.4470e-04 weaklyHypermeth 0.236174 insignificant 0.21797 0.0058213 0.21612876 14 0.24178 0.039689 0.2020936 2.4693e-36 1.0000e+00 hypermethylated 6.1733e-34 1.000000 hypermethylated 3.8303e-26 1.0000000 hypermethylated 3.8303e-23 1 hypermethylated 0.24825937 3.0004e-06 hypermethylated 6.0009e-04 hypermethylated 0.21794 0.068806 0.13374591 12 0.24178 0.16123 0.0805521 2.3848e-13 1.0000e+00 weaklyHypermeth 2.3848e-10 1.0000000 weaklyHypermeth 2.9640e-11 0.9999991 weaklyHypermeth 2.9640e-08 1 weaklyHypermeth 0.1225982 0.0056334 weaklyHypermeth 1 insignificant 0.0055710 0.068553 -0.0654527 12 0.0068099 0.10132 -0.09450869 1.0000000 1.1506e-18 weaklyHypometh 1 2.8764e-16 weaklyHypometh 1.0000000 3.3360e-13 weaklyHypometh 1 3.3360e-10 weaklyHypometh -0.1256612 3.6103e-03 weaklyHypometh 0.1805146 insignificant chrX 9242773 9243773 156263 ENSG00000219308 0.79198 304 13 0.78085 183 10 0.52320 157 12 0.86993 228 10 0.65148 175 13 0.76748 363 10 0.64947 198 13 0.75971 236 13 0.81898 173 12 0.63896 165 10 0.73804 377 13 0.70143 165 13 0.82459 247 13 0.67436 174 11 0.65880 205 13 0.68572 113 8 0.72147 95 7 0.77324 353 11 0.63198 228 10 0.77225 388 10 0.82593 98 8 0.851940 107 8 0.76232 240 13 0.77795 113 10 0.80177 141 8 0.79850 226 10 0.80066 131 9 0.60175 83 5 0.766983 244 13 0.67877 206 10 0.74127 236 10 0.65529 387 10 0.738998 259 12 0.5879818 149 10 0.64455675 200 13 0.827922 55 3 0.801762 140 10 0.6945347 271 10 0.735899 217 13 0.77250 274 10 0.79263 257 13 0.81096 217 13 0.704465 267 13 0.83111 0.74960 0.59917 0.86010 0.67670 0.81498 0.71411 0.82036 0.79119 0.78055 0.79415 0.74377 0.834069 0.81860 0.77913 0.68315 0.77848 0.85441 0.794373 0.77687 0.82142 0.839233 0.77728 0.78440 0.80196 0.82770 0.74433 0.77977 0.774840 0.76491 0.81961 0.81829 0.7104041 0.707366 0.7327585 0.84442 0.7755650 0.7369845 0.804194 0.78586 0.802990 0.814490 0.733601 5 0.77532 0.79702 -0.0178295 10 0.68147 0.71000 -0.0285314 0.94108 6.1171e-02 insignificant 1 1.0000000 insignificant 0.98827 2.5644e-02 weaklyHypometh 1 1.0000000 insignificant -0.0335642 0.2483344 insignificant 1 insignificant 0.77564 0.7169460 0.0628916 10 0.69694 0.654438 0.0425009 1.0499e-03 9.9634e-01 weaklyHypermeth 1.8419e-02 1.0000e+00 weaklyHypermeth 1.2139e-01 7.0525e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0057367 8.9474e-01 insignificant 1.0000e+00 insignificant 0.77634 0.80519 -0.0257695 13 0.69072 0.76303 -0.0723163 5.9521e-01 1.0934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7022e-01 4.4092e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0415957 1.4534e-01 insignificant 1.000000 insignificant 0.79710 0.7169460 0.08009364 10 0.73471 0.654438 0.0802713 8.7851e-06 9.9968e-01 weaklyHypermeth 2.4403e-04 1.000000 weaklyHypermeth 6.3842e-02 0.9886239 insignificant 9.9754e-01 1 insignificant 0.03930093 3.8909e-01 insignificant 1.0000e+00 insignificant 0.79872 0.804878 0.00138226 10 0.73545 0.73144 0.0040123 6.6911e-01 7.8804e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2943e-01 0.7265285 insignificant 1.0000e+00 1 insignificant -0.0080315 0.7850485 insignificant 1 insignificant 0.7184557 0.805375 -0.0826798 10 0.7019570 0.76704 -0.06508415 0.9980412 5.3098e-06 weaklyHypometh 1 3.3186e-04 weaklyHypometh 0.9715342 4.2183e-02 weaklyHypometh 1 8.1121e-01 insignificant -0.0473324 2.9771e-01 insignificant 1.0000000 insignificant chrX 15559512 15560512 156720 ACE2 ENSG00000130234 0.61043 218 6 0.49767 64 6 0.74019 99 6 0.45637 133 6 0.72222 32 3 0.61583 265 9 0.59003 94 6 0.66481 83 6 0.55417 88 3 0.84048 58 6 0.50354 209 6 0.49966 37 3 0.70661 89 6 1.00000 16 0 0.54926 67 3 0.41905 57 3 0.57703 59 3 0.56797 189 6 0.69990 146 6 0.61018 194 9 0.62500 29 3 0.777778 54 6 0.70205 84 6 0.61608 49 4 0.77302 50 6 0.61235 163 9 0.69392 50 4 0.39377 25 1 0.479988 66 5 0.68376 148 6 0.49857 146 6 0.70015 248 7 0.519444 113 6 0.4036311 79 3 0.44384741 109 6 0.626712 35 3 0.363105 57 4 0.5344875 91 6 0.662223 142 6 0.56942 144 6 0.79193 135 6 0.59385 129 6 0.587776 134 6 0.77395 0.51357 0.69451 0.72779 0.71208 0.72202 0.61853 0.76944 0.61253 0.80557 0.77450 0.62363 0.726227 0.79377 0.62226 0.62346 0.59409 0.71067 0.742134 0.73692 0.86130 0.839885 0.74934 0.86616 0.79514 0.69072 0.85171 0.67226 0.594248 0.69774 0.67641 0.73121 0.5579791 0.573935 0.7003287 0.74872 0.6403803 0.5403416 0.673620 0.72607 0.721818 0.702648 0.745359 3 0.68594 0.70683 -0.0077257 6 0.61421 0.60172 0.0124885 0.63160 6.3022e-01 insignificant 1 1.0000000 insignificant 0.84120 2.4276e-01 insignificant 1 1.0000000 insignificant -0.0084339 0.8561654 insignificant 1 insignificant 0.68594 0.6115702 0.0897382 6 0.61421 0.509541 0.1046652 7.7108e-05 9.9952e-01 weaklyHypermeth 1.5422e-03 1.0000e+00 weaklyHypermeth 3.4491e-03 9.9876e-01 weaklyHypermeth 7.3386e-02 1.00000000 weaklyHypermeth 0.1393986 1.6791e-02 lowCoverage 4.7176e-01 lowCoverage 0.68594 0.68275 -0.0055122 6 0.61421 0.65305 -0.0388389 8.3705e-01 2.5683e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1503e-01 2.9069e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0197697 7.0786e-01 insignificant 1.000000 insignificant 0.70683 0.6115702 0.09619007 6 0.60172 0.509541 0.0921767 1.8525e-04 9.9834e-01 weaklyHypermeth 3.9298e-03 1.000000 weaklyHypermeth 7.1443e-04 0.9996579 weaklyHypermeth 2.6460e-02 1 weaklyHypermeth 0.14783252 1.5083e-02 lowCoverage 4.6867e-01 lowCoverage 0.70683 0.682749 -0.00066461 6 0.60172 0.65305 -0.0513274 8.2057e-01 9.5853e-02 insignificant 1.0000e+00 1.0000000 insignificant 6.3456e-01 0.3177518 insignificant 1.0000e+00 1 insignificant -0.0113358 0.8361299 insignificant 1 insignificant 0.6115702 0.682749 -0.0995510 6 0.5095413 0.65305 -0.14350411 0.9980107 7.8161e-04 weaklyHypometh 1 2.2989e-02 weaklyHypometh 0.9913072 4.8014e-03 weaklyHypometh 1 1.8467e-01 insignificant -0.1591683 2.1131e-02 lowCoverage 0.6278801 lowCoverage chrX 16375093 16376093 156768 ENSG00000215313 0.77379 142 6 0.67945 128 6 0.58340 105 6 0.82162 100 6 0.70278 52 6 0.80090 244 6 0.74748 62 6 0.74856 130 6 0.71356 67 4 0.82193 79 6 0.72782 221 6 0.42917 36 4 0.81220 113 6 0.83056 35 5 0.62546 36 4 0.20000 9 0 0.73626 22 2 0.78120 81 4 0.80126 76 6 0.76140 193 6 0.73810 32 4 0.798818 79 6 0.71376 66 4 0.79361 49 4 0.72619 41 5 0.76668 142 6 0.77863 65 5 0.72292 21 3 0.780199 85 6 0.81146 128 6 0.74714 76 5 0.78709 278 6 0.839674 112 6 0.6359127 69 5 0.57948425 171 6 0.722222 17 0 0.676190 55 5 0.6765579 164 6 0.753075 87 4 0.90097 84 6 0.81236 107 6 0.74369 54 4 0.780159 75 6 0.79688 0.70085 0.63731 0.82460 0.72003 0.79961 0.75861 0.78273 0.73500 0.85585 0.76317 0.47926 0.834048 0.79998 0.63557 0.27435 0.75507 0.80053 0.812457 0.77983 0.72757 0.820744 0.75634 0.78609 0.73447 0.78555 0.78915 0.74182 0.801212 0.81567 0.76270 0.79294 0.8517779 0.665605 0.6011126 0.72868 0.6881506 0.7242002 0.787495 0.90866 0.829987 0.778248 0.785161 3 0.75608 0.78249 -0.0267574 6 0.74002 0.78017 -0.0401555 0.72161 1.1689e-02 weaklyHypometh 1 1.0000000 insignificant 0.78542 1.1034e-02 weaklyHypometh 1 1.0000000 insignificant -0.0587760 0.1122334 insignificant 1 insignificant 0.75608 0.6870748 0.0589748 6 0.74002 0.684307 0.0557113 1.0404e-01 9.8418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0244e-01 8.9090e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0166000 7.4295e-01 lowCoverage 1.0000e+00 lowCoverage 0.75608 0.83784 -0.0893607 6 0.74002 0.81445 -0.0744360 9.9059e-01 5.9128e-03 weaklyHypometh 1.0000e+00 8.2708e-01 insignificant 9.8451e-01 2.1832e-03 weaklyHypometh 1.0000e+00 0.4366384 insignificant -0.0931097 5.1772e-02 insignificant 1.000000 insignificant 0.78249 0.6870748 0.08653580 6 0.78017 0.684307 0.0958668 6.3612e-04 9.5490e-01 weaklyHypermeth 1.2002e-02 1.000000 weaklyHypermeth 1.1605e-02 0.8684423 weaklyHypermeth 2.3211e-01 1 insignificant 0.07537606 9.1947e-02 lowCoverage 1.0000e+00 lowCoverage 0.78249 0.837838 -0.06561261 6 0.78017 0.81445 -0.0342805 3.1570e-01 5.3908e-03 weaklyHypometh 1.0000e+00 0.9001970 insignificant 5.1389e-01 0.0021560 weaklyHypometh 1.0000e+00 1 insignificant -0.0343337 0.3038274 insignificant 1 insignificant 0.6870748 0.837838 -0.1520929 6 0.6843072 0.81445 -0.13014727 0.9980931 1.7885e-02 weaklyHypometh 1 3.4394e-01 insignificant 0.9757592 2.8598e-02 weaklyHypometh 1 6.2169e-01 insignificant -0.1097097 4.0788e-02 lowCoverage 1.0000000 lowCoverage chrX 18334343 18335343 156990 ENSG00000207025 0.79444 65 4 0.63203 73 6 0.75714 21 2 0.81601 119 6 0.78571 39 4 0.87284 60 4 0.74107 36 4 0.84091 52 6 0.55000 20 2 0.66667 10 0 0.77937 134 6 0.50000 6 0 0.59921 52 4 0.61395 35 3 0.76190 45 3 0.61905 21 3 0.88889 9 0 0.69167 94 5 0.53333 16 1 0.76852 33 4 0.68000 9 1 1.000000 5 0 0.61411 40 4 0.78333 41 5 0.72273 42 5 0.82323 73 6 0.66048 36 5 0.71429 13 0 0.803819 34 3 0.68042 51 6 0.70694 69 6 0.56720 59 6 0.580682 57 6 0.6990741 51 6 0.64814815 84 4 0.719807 49 2 0.556667 33 3 0.3742529 72 6 0.526129 60 6 0.67459 119 6 0.53589 100 6 0.56000 18 3 0.693003 90 6 0.76667 0.66883 0.64286 0.72942 0.64286 0.81162 0.83333 0.78896 0.81429 0.57143 0.66354 0.48946 0.717687 0.81122 0.78571 0.59150 0.82279 0.73810 0.666667 0.68254 0.91429 0.905525 0.76009 0.83810 0.74286 0.78297 0.89116 0.85714 0.658730 0.66032 0.74683 0.43764 0.7415584 0.734127 0.7539683 0.67784 0.6761905 0.5125313 0.661101 0.67521 0.788429 0.800000 0.767157 0 0.73085 0.72553 0.0221704 4 0.65580 0.70585 -0.0500497 0.79113 9.6917e-01 lowCoverage 1 1.0000000 lowCoverage 0.79015 4.5530e-01 lowCoverage 1 1.0000000 lowCoverage -0.0190765 0.6506080 lowCoverage 1 lowCoverage 0.73212 0.6473988 0.0642602 4 0.68805 0.479354 0.2086914 1.7575e-02 9.9994e-01 lowCoverage 2.4409e-01 1.0000e+00 lowCoverage 6.9628e-02 9.9990e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.1141974 8.4212e-02 lowCoverage 1.0000e+00 lowCoverage 0.73212 0.68653 0.0394296 4 0.69042 0.57620 0.1142191 8.4891e-03 9.5784e-01 lowCoverage 5.3057e-01 1.0000e+00 lowCoverage 1.5794e-02 9.2142e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.1127149 3.1071e-02 lowCoverage 1.000000 lowCoverage 0.72863 0.6473988 0.06206780 6 0.77643 0.479354 0.2970794 1.3159e-01 9.9622e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8185e-02 0.9999318 insignificant 9.3847e-01 1 insignificant 0.13327386 5.6187e-02 lowCoverage 1.0000e+00 lowCoverage 0.72068 0.684755 0.04113944 6 0.57643 0.51858 0.0578519 3.2946e-01 9.9447e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.3871e-01 0.9999236 insignificant 1.0000e+00 1 insignificant 0.1317914 0.0199462 lowCoverage 1 lowCoverage 0.6511628 0.688312 -0.0064798 6 0.5991920 0.64823 -0.04903436 0.9053422 4.4106e-01 insignificant 1 1.0000e+00 insignificant 0.9140934 6.7479e-01 insignificant 1 1.0000e+00 insignificant -0.0014825 9.8166e-01 lowCoverage 1.0000000 lowCoverage chrX 20146490 20147490 157116 RPS6KA3 ENSG00000177189 0.71034 125 5 0.57946 50 3 0.48130 118 5 0.77917 37 2 0.53688 85 5 0.69307 128 4 0.62068 70 5 0.74064 144 5 0.63109 109 5 0.66242 72 4 0.67266 173 5 0.066667 26 2 0.52824 155 5 0.35714 14 2 0.49576 59 5 0.44000 40 3 0.31864 59 4 0.52646 49 4 0.79180 83 4 0.81093 202 5 0.68995 21 3 0.42333 23 1 0.50639 72 5 0.72316 84 5 0.45833 19 1 0.64868 131 5 0.66284 57 4 0.52333 39 4 0.68714 70 5 0.55231 92 5 0.52739 119 5 0.73426 221 5 0.58422 98 5 0.26381 60 5 0.90152 116 4 0.64667 17 2 0.19642 65 2 0.71067 102 5 0.67796 173 5 0.42222 37 4 0.49829 87 4 0.61484 84 4 0.40751 68 4 0.68394 0.53710 0.41959 0.66471 0.45579 0.63253 0.55763 0.67119 0.57186 0.56886 0.66714 0.020576 0.42458 0.42725 0.51796 0.46235 0.29726 0.46884 0.69018 0.77132 0.65760 0.36152 0.41119 0.66828 0.46713 0.57167 0.59774 0.45494 0.71076 0.42498 0.45418 0.68552 0.43423 0.21737 0.81727 0.45679 0.18211 0.66203 0.59374 0.36626 0.42804 0.58838 0.39304 1 0.60011 0.60549 0.00097656 5 0.63106 0.63664 -0.0055835 0.6479960 0.511344 insignificant 1 1 insignificant 0.629834 0.40928 insignificant 1 1 insignificant -0.02259336 0.663827 lowCoverage 1 lowCoverage 0.60011 0.60262 -3.2676e-03 5 0.63106 0.61870 0.0123589 3.0547e-01 0.369111 insignificant 1.0000e+00 1 insignificant 1.5247e-01 0.739646 insignificant 1.000000 1 insignificant 0.02161537 8.6019e-01 lowCoverage 1.000000 lowCoverage 0.60011 0.55902 0.0760780 4 0.63106 0.56428 0.066778 6.7969e-02 0.88397021 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.7699e-02 0.8517355 lowCoverage 1.000000 1.0000 lowCoverage 0.0480033 0.49172832 lowCoverage 1.00000 lowCoverage 0.60549 0.60262 0.0172283 5 0.63664 0.61870 0.0179424 4.0264e-01 0.58870 insignificant 1.0000e+00 1 insignificant 0.23011059 0.78667 insignificant 1.000000 1 insignificant 0.0442087 0.7140779 lowCoverage 1.00000 lowCoverage 0.60549 0.55902 0.062211 4 0.63664 0.56428 0.07236162 5.6855e-02 0.91741720 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.3745e-02 0.915967 lowCoverage 1.000000 1 lowCoverage 0.0705966 0.290105 lowCoverage 1 lowCoverage 0.60262 0.55902 0.034491 4 0.61870 0.56428 0.0544192 0.25508 6.5712e-01 lowCoverage 1 1.0000000 lowCoverage 0.57652 3.5059e-01 lowCoverage 1 1.000000 lowCoverage 0.0263879 0.8357583 lowCoverage 1 lowCoverage chrX 21918362 21919362 157319 SMS ENSG00000102172 0.74043 147 6 0.58671 69 4 0.65351 122 5 0.64902 153 5 0.72639 56 5 0.76275 87 5 0.65926 35 4 0.67322 52 5 0.69365 29 4 0.73333 16 0 0.80598 93 5 0.583333 15 0 0.72240 70 5 0.61869 40 5 0.66667 35 5 0.46667 10 0 0.69697 23 2 0.72404 223 6 0.54924 38 3 0.74989 53 5 0.83333 10 0 0.66667 6 0 0.50480 140 5 0.61667 22 2 0.70985 80 5 0.67507 71 5 0.80545 36 3 0.42190 28 4 0.80667 56 5 0.71566 49 5 0.48029 51 5 0.68824 41 2 0.73032 59 5 0.68226 75 5 0.57956 86 5 0.73333 15 3 0.65476 49 5 0.78866 86 5 0.69460 182 5 0.58215 153 5 0.70137 179 5 0.77569 177 5 0.51690 169 5 0.67723 0.50428 0.66898 0.63629 0.66021 0.69926 0.56808 0.66286 0.61167 0.71831 0.76430 0.490610 0.65616 0.72791 0.64789 0.47418 0.69249 0.73469 0.54364 0.69423 0.82394 0.70684 0.59482 0.62324 0.63221 0.59516 0.79449 0.40060 0.75494 0.63957 0.56186 0.74565 0.66520 0.59723 0.46704 0.62788 0.67505 0.73211 0.75372 0.68442 0.62146 0.71567 0.60945 0 0.62299 0.59661 0.02707201 5 0.69346 0.62623 0.0672292 0.1431806 0.947763 insignificant 1 1 insignificant 0.634591 0.66006 insignificant 1 1 insignificant 0.01272349 0.768374 lowCoverage 1 lowCoverage 0.62299 0.61892 2.5448e-02 5 0.69346 0.68349 0.0099693 2.2091e-01 0.353994 insignificant 1.0000e+00 1 insignificant 5.9566e-01 0.357823 insignificant 1.000000 1 insignificant -0.02170984 5.4928e-01 lowCoverage 1.000000 lowCoverage 0.62299 0.61628 -0.0078351 5 0.69346 0.67375 0.019704 6.3345e-01 0.56094586 insignificant 1.0000e+00 1.00000 insignificant 5.9521e-01 0.5402969 insignificant 1.000000 1.0000 insignificant 0.0189655 0.71727846 lowCoverage 1.00000 lowCoverage 0.59661 0.61892 -0.0061268 5 0.62623 0.68349 -0.0572598 6.2394e-01 0.22226 insignificant 1.0000e+00 1 insignificant 0.48115479 0.54988 insignificant 1.000000 1 insignificant -0.0344333 0.4887203 lowCoverage 1.00000 lowCoverage 0.59661 0.61628 -0.033297 5 0.62623 0.67375 -0.04752527 9.5544e-01 0.26720042 insignificant 1.0000e+00 1.00000 insignificant 6.2057e-01 0.736052 insignificant 1.000000 1 insignificant 0.0062420 0.919311 lowCoverage 1 lowCoverage 0.61892 0.61628 -0.032140 5 0.68349 0.67375 0.0097346 0.46416 1.2961e-01 insignificant 1 1.0000000 insignificant 0.41305 2.4182e-01 insignificant 1 1.000000 insignificant 0.0406754 0.4831161 lowCoverage 1 lowCoverage chrX 22051324 22052324 157335 PHEX ENSG00000102174 0.72767 178 5 0.66332 119 5 0.59651 64 5 0.68897 107 5 0.71251 96 5 0.73528 79 5 0.63571 76 5 0.71459 90 5 0.63261 71 5 0.73611 49 5 0.67018 132 5 0.753846 44 3 0.77500 85 5 0.67619 31 4 0.75714 54 5 0.74667 49 3 0.50000 8 0 0.70901 116 6 0.67533 49 2 0.62687 96 2 0.80000 14 0 0.70000 13 1 0.57000 120 5 0.57143 34 2 0.72333 54 3 0.67493 92 5 0.61335 58 5 0.65000 30 3 0.67812 111 5 0.78667 63 2 0.75928 73 2 0.72279 113 3 0.46057 115 5 0.52523 58 5 0.35049 79 4 0.66667 3 0 0.47798 85 5 0.51898 83 5 0.72308 72 5 0.71064 109 5 0.70488 109 5 0.64721 82 4 0.61111 97 5 0.74909 0.66709 0.62069 0.70551 0.73495 0.75637 0.70968 0.73796 0.63914 0.68683 0.68869 0.761787 0.79234 0.68030 0.77074 0.74946 0.52419 0.76293 0.68108 0.78321 0.82258 0.74194 0.59812 0.82258 0.75000 0.69385 0.62017 0.68145 0.68030 0.81075 0.78856 0.73945 0.49969 0.56153 0.48031 0.62888 0.40531 0.51972 0.72953 0.73516 0.71870 0.67297 0.74578 0 0.71891 0.76486 0.00133365 5 0.58369 0.57898 0.0047039 0.3793663 0.900262 insignificant 1 1 insignificant 0.678070 0.33125 insignificant 1 1 insignificant -0.00081518 0.975847 lowCoverage 1 lowCoverage 0.71779 0.51064 2.1601e-01 5 0.67744 0.47571 0.2017318 1.9073e-13 0.999982 hypermethylated 9.5364e-11 1 hypermethylated 4.4910e-05 0.997756 hypermethylated 0.013105 1 hypermethylated 0.18668940 5.2333e-03 lowCoverage 1.000000 lowCoverage 0.71779 0.71855 -0.0144240 5 0.67744 0.59683 0.080606 6.1902e-01 0.37004660 insignificant 1.0000e+00 1.00000 insignificant 7.4425e-01 0.5357899 insignificant 1.000000 1.0000 insignificant 0.0072931 0.78638380 lowCoverage 1.00000 lowCoverage 0.76585 0.51190 0.2315914 5 0.69478 0.50418 0.1906002 1.8633e-08 0.99997 hypermethylated 9.3167e-06 1 hypermethylated 0.00017619 0.99999 hypermethylated 0.058732 1 hypermethylated 0.1875046 0.0044194 lowCoverage 0.73015 lowCoverage 0.76585 0.72009 -0.023532 5 0.69478 0.71620 -0.02141796 9.6851e-01 0.06204561 insignificant 1.0000e+00 1.00000 insignificant 5.7483e-01 0.238469 insignificant 1.000000 1 insignificant 0.0081083 0.797166 lowCoverage 1 lowCoverage 0.51064 0.71855 -0.216708 5 0.47571 0.59683 -0.1211263 0.99680 6.5064e-06 hypomethylated 1 0.0016266 hypomethylated 0.98742 2.8131e-03 weaklyHypometh 1 0.592778 insignificant -0.1793963 0.0062084 lowCoverage 1 lowCoverage chrX 22988751 22989751 157468 DDX53 ENSG00000184735 0.85627 251 6 0.75106 190 8 0.75405 493 6 0.75951 148 6 0.82945 464 6 0.70469 298 8 0.83692 122 6 0.69116 284 7 0.72743 397 6 0.76719 419 4 0.68450 556 6 0.749567 97 6 0.77962 443 6 0.84702 63 3 0.73486 215 6 0.64608 92 4 0.67500 50 5 0.60470 214 6 0.78781 280 6 0.77746 269 8 0.62690 120 5 0.70769 69 6 0.88040 136 6 0.75756 141 5 0.74132 69 6 0.76346 179 8 0.65787 152 6 0.53824 90 4 0.79296 151 6 0.71881 149 8 0.71714 128 6 0.76553 341 8 0.52912 141 8 0.69474 178 8 0.63661 179 5 0.74167 24 3 0.67924 282 6 0.61904 141 6 0.73983 199 6 0.76932 160 8 0.71993 166 6 0.79847 155 6 0.78391 171 6 0.86946 0.79888 0.82811 0.83813 0.84336 0.83691 0.80362 0.86716 0.84581 0.87719 0.84687 0.822433 0.86094 0.84193 0.86449 0.73866 0.85119 0.75760 0.84724 0.85420 0.78217 0.73731 0.82431 0.81059 0.80977 0.80207 0.79178 0.79149 0.84207 0.85898 0.79690 0.81776 0.65149 0.68524 0.66675 0.71035 0.82288 0.66977 0.81043 0.85893 0.85291 0.76910 0.82319 4 0.87147 0.81971 0.02798921 6 0.76403 0.74467 0.0193641 0.0057364 0.424313 weaklyHypermeth 1 1 insignificant 0.042188 0.35237 weaklyHypermeth 1 1 insignificant 0.02589383 0.386063 insignificant 1 insignificant 0.87147 0.75556 9.6635e-02 6 0.76403 0.68481 0.0792191 6.6286e-04 0.988298 weaklyHypermeth 4.4191e-02 1 weaklyHypermeth 3.6307e-03 0.969503 weaklyHypermeth 0.403410 1 insignificant 0.09815007 1.9979e-02 weaklyHypermeth 1.000000 insignificant 0.87147 0.81551 0.0151295 6 0.76403 0.74417 0.019861 3.9576e-02 0.65353193 weaklyHypermeth 1.0000e+00 1.00000 insignificant 4.6896e-01 0.3503776 insignificant 1.000000 1.0000 insignificant -0.0140747 0.50963086 insignificant 1.00000 insignificant 0.81971 0.75556 0.0666316 6 0.74467 0.68481 0.0598550 1.3959e-02 0.99266 weaklyHypermeth 4.9853e-01 1 insignificant 0.01300745 0.97938 weaklyHypermeth 0.722636 1 insignificant 0.0722562 0.0895677 insignificant 1.00000 insignificant 0.81971 0.81551 0.003101 6 0.74467 0.74417 0.00049671 6.5817e-01 0.74410012 insignificant 1.0000e+00 1.00000 insignificant 9.0895e-01 0.561888 insignificant 1.000000 1 insignificant -0.0399685 0.186024 insignificant 1 insignificant 0.75556 0.81551 -0.069646 6 0.68481 0.74417 -0.0593583 0.98137 9.4615e-02 insignificant 1 1.0000000 insignificant 0.98748 3.9202e-02 weaklyHypometh 1 1.000000 insignificant -0.1122247 0.0116412 weaklyHypometh 1 insignificant chrX 23102961 23103961 157483 ENSG00000221786 0.67168 196 5 0.50974 117 5 0.56791 106 5 0.79862 90 5 0.66389 71 5 0.57697 271 5 0.58002 134 5 0.63131 143 5 0.58966 86 5 0.58009 115 5 0.59170 210 5 0.538847 83 5 0.69531 143 5 1.00000 5 1 0.65774 140 5 0.53333 89 5 0.56459 116 5 0.60499 105 4 0.67512 127 4 0.58839 193 5 0.63333 33 4 0.36698 71 5 0.60640 72 5 0.65511 68 5 0.59515 69 4 0.74297 210 5 0.54978 79 5 0.69325 46 5 0.69480 155 5 0.69885 192 5 0.63385 193 5 0.66353 314 5 0.64031 142 5 0.57417 139 5 0.73194 86 5 0.70725 57 5 0.45495 78 5 0.68090 155 5 0.70079 123 5 0.65803 129 5 0.63465 120 5 0.59802 190 5 0.59472 146 5 0.68686 0.55794 0.61121 0.81072 0.71802 0.60514 0.61967 0.65485 0.62549 0.61496 0.62675 0.568755 0.72248 NA 0.70694 0.55493 0.58088 0.62453 0.69125 0.63756 0.67195 0.41667 0.65056 0.66553 0.61263 0.77074 0.57446 0.72055 0.72426 0.72330 0.67697 0.69670 0.66959 0.66489 0.76077 0.74442 0.50770 0.73195 0.74619 0.67391 0.66190 0.61760 0.62532 4 0.62756 0.68775 -0.04036535 5 0.60772 0.65081 -0.0430977 0.9992834 0.018815 weaklyHypometh 1 1 insignificant 0.971450 0.20290 insignificant 1 1 insignificant 0.00316151 0.933228 lowCoverage 1 lowCoverage 0.62756 0.67732 -3.5381e-02 5 0.60772 0.63504 -0.0273235 1.5826e-01 0.024623 weaklyHypometh 1.0000e+00 1 insignificant 3.0054e-01 0.072043 insignificant 1.000000 1 insignificant -0.00059019 9.9058e-01 lowCoverage 1.000000 lowCoverage 0.62756 0.62006 -0.0153947 5 0.60772 0.62985 -0.022137 9.3278e-01 0.18275319 insignificant 1.0000e+00 1.00000 insignificant 9.6583e-01 0.1960797 insignificant 1.000000 1.0000 insignificant -0.0062471 0.84519679 lowCoverage 1.00000 lowCoverage 0.68775 0.67732 0.0072062 5 0.65081 0.63504 0.0157742 1.1172e-02 0.58601 weaklyHypermeth 4.4688e-01 1 insignificant 0.03259343 0.28556 weaklyHypermeth 1.000000 1 insignificant -0.0037517 0.9423416 lowCoverage 1.00000 lowCoverage 0.68775 0.62006 0.023842 5 0.65081 0.62985 0.02096091 4.4625e-01 0.77390460 insignificant 1.0000e+00 1.00000 insignificant 6.4078e-01 0.715324 insignificant 1.000000 1 insignificant -0.0094086 0.788435 lowCoverage 1 lowCoverage 0.67732 0.62006 0.025088 5 0.63504 0.62985 0.0051867 0.19414 1.0194e-01 insignificant 1 1.0000000 insignificant 0.33538 2.0088e-01 insignificant 1 1.000000 insignificant -0.0056569 0.9063396 insignificant 1 insignificant chrX 23863901 23864901 157546 CXorf58 ENSG00000165182 0.82590 168 4 0.74073 108 5 0.73526 72 4 0.86257 87 4 0.77778 42 4 0.82137 201 4 0.87900 58 3 0.76974 63 4 0.84579 55 4 0.65074 50 4 0.74925 124 4 0.791667 25 3 0.82310 97 4 NA 0 0 0.86607 90 4 0.83586 41 3 0.69201 54 3 0.82383 96 4 0.88797 106 4 0.81714 209 5 0.83697 43 4 0.83586 51 3 0.74519 97 4 0.93182 50 4 0.75652 44 3 0.78369 135 5 0.86984 52 4 0.50000 12 1 0.72794 86 4 0.72243 120 4 0.82520 187 5 0.82797 268 5 0.72090 63 5 0.70524 75 5 0.62375 102 3 0.50952 42 3 0.85254 33 3 0.85307 141 5 0.86551 93 3 0.89413 104 5 0.87968 131 3 0.88995 118 3 0.85629 99 4 0.80551 0.68193 0.73973 0.84655 0.86834 0.76809 0.82997 0.80242 0.81956 0.79017 0.73288 0.784247 0.80557 NA 0.86130 0.81424 0.63487 0.78637 0.85143 0.78792 0.85857 0.81355 0.81410 0.93275 0.71894 0.77463 0.80300 0.59302 0.76981 0.80146 0.87386 0.81442 0.67248 0.61453 0.62928 0.66145 0.82594 0.81498 0.81098 0.85754 0.83166 0.84817 0.81648 3 0.80412 0.81310 -0.01112759 5 0.81158 0.80341 0.0081669 0.1708540 0.172861 insignificant 1 1 insignificant 0.351571 0.43115 insignificant 1 1 insignificant 0.01949147 0.579261 lowCoverage 1 lowCoverage 0.80412 0.72149 6.9497e-02 4 0.81158 0.75898 0.0525967 3.0837e-04 0.600093 lowCoverage 2.3721e-02 1 lowCoverage 9.0952e-03 0.657602 lowCoverage 0.757931 1 lowCoverage 0.08894047 1.6727e-01 lowCoverage 1.000000 lowCoverage 0.80412 0.85505 -0.0494067 4 0.81158 0.87875 -0.067170 9.7951e-01 0.00066215 lowCoverage 1.0000e+00 0.66215 lowCoverage 9.6948e-01 0.0004699 lowCoverage 1.000000 0.4699 lowCoverage -0.0773316 0.00010197 lowCoverage 0.10197 lowCoverage 0.81310 0.72149 0.0815296 4 0.80341 0.75898 0.0444298 4.9727e-04 0.61261 lowCoverage 3.8252e-02 1 lowCoverage 0.01284238 0.83249 lowCoverage 0.722636 1 lowCoverage 0.0694490 0.2981278 lowCoverage 1.00000 lowCoverage 0.81310 0.85505 -0.026549 4 0.80341 0.87875 -0.07533674 9.5511e-01 0.00056004 lowCoverage 1.0000e+00 0.29256 lowCoverage 9.8417e-01 0.011572 lowCoverage 1.000000 1 lowCoverage -0.0968231 0.010383 lowCoverage 1 lowCoverage 0.72149 0.85505 -0.114810 3 0.75898 0.87875 -0.1197665 0.82195 9.8246e-05 lowCoverage 1 0.0163743 lowCoverage 0.84832 5.2115e-05 lowCoverage 1 0.052115 lowCoverage -0.1662721 0.0277086 lowCoverage 1 lowCoverage chrX 24102944 24103944 157565 ZFX ENSG00000005889 0.80165 132 5 0.85987 101 5 0.72551 64 5 0.82951 168 5 0.84286 32 5 0.75710 201 5 0.66667 30 2 0.67330 110 5 0.80000 34 5 0.82323 51 5 0.83751 168 5 0.500000 18 0 0.80152 35 5 0.77500 36 5 0.79861 49 5 0.58333 19 0 0.26667 14 0 0.60987 87 5 0.78909 63 5 0.90799 104 5 0.72381 22 1 0.61667 31 4 0.89319 51 5 0.82450 50 4 0.92347 36 5 0.79490 105 5 0.89066 40 4 1.00000 5 1 0.85333 51 5 0.64535 69 5 0.79869 80 5 0.82397 184 5 0.71417 62 5 0.66667 73 5 0.78048 82 6 0.93056 21 1 0.71116 40 5 0.81241 79 5 0.72833 84 5 0.71006 109 5 0.85946 124 6 0.83971 79 5 0.84619 106 6 0.80514 0.79857 0.68326 0.77048 0.87755 0.76383 0.74490 0.75145 0.77493 0.82380 0.81176 0.515306 0.77882 0.78663 0.80067 0.59694 0.28231 0.73964 0.79295 0.89091 0.81701 0.74456 0.87358 0.79499 0.88812 0.87510 0.89706 NA 0.85714 0.65840 0.81958 0.79323 0.71161 0.80102 0.74242 0.91327 0.74076 0.84401 0.82355 0.85495 0.81064 0.83974 0.78842 0 0.77836 0.81906 -0.03130991 5 0.74205 0.76240 -0.0203473 0.9794972 0.268681 insignificant 1 1 insignificant 0.996811 0.10788 insignificant 1 1 insignificant -0.08324745 0.083996 lowCoverage 1 lowCoverage 0.77836 0.78711 6.6114e-06 5 0.74205 0.76655 -0.0245018 3.5778e-01 0.693397 insignificant 1.0000e+00 1 insignificant 6.3516e-01 0.555934 insignificant 1.000000 1 insignificant -0.03677702 4.8522e-01 lowCoverage 1.000000 lowCoverage 0.77873 0.83068 -0.0481429 5 0.77663 0.80060 -0.023971 9.8592e-01 0.22795297 insignificant 1.0000e+00 1.00000 insignificant 9.9481e-01 0.1568181 insignificant 1.000000 1.0000 insignificant -0.0642856 0.18695020 lowCoverage 1.00000 lowCoverage 0.81906 0.78711 0.0323003 5 0.76240 0.76655 -0.0041545 2.6086e-01 0.95636 insignificant 1.0000e+00 1 insignificant 0.41372159 0.99458 insignificant 1.000000 1 insignificant 0.0464704 0.3743756 lowCoverage 1.00000 lowCoverage 0.81994 0.83068 -0.015398 5 0.79989 0.80060 -0.00071660 7.5879e-01 0.63465006 insignificant 1.0000e+00 1.00000 insignificant 7.8313e-01 0.819464 insignificant 1.000000 1 insignificant 0.0189618 0.683283 lowCoverage 1 lowCoverage 0.78652 0.83068 -0.046527 5 0.73320 0.80060 -0.0673972 0.97340 1.0116e-01 insignificant 1 1.0000000 insignificant 0.99638 2.3411e-01 insignificant 1 1.000000 insignificant -0.0275086 0.5970351 lowCoverage 1 lowCoverage chrX 25053188 25054188 157746 ENSG00000210567,ENSG00000222603 0.69362 85 5 0.56393 101 5 0.69714 34 5 0.69741 94 5 0.67333 24 2 0.75600 133 5 0.60606 44 4 0.73544 112 5 0.62500 37 5 0.60000 25 5 0.74371 122 5 0.640000 13 1 0.77798 67 5 0.70476 31 4 0.77262 41 5 0.45000 8 0 0.50000 14 0 0.77953 101 5 0.76460 54 5 0.68986 112 5 0.74286 32 4 0.82418 41 5 0.58939 69 5 0.54939 48 5 0.77143 35 5 0.72253 66 5 0.67143 41 4 0.60000 14 1 0.69444 57 5 0.75362 35 1 0.69474 35 1 0.69433 183 5 0.59196 58 5 0.66187 88 5 0.67333 55 5 0.93333 13 0 0.71702 33 2 0.69745 69 5 0.60889 59 5 0.81889 98 5 0.70552 96 5 0.65606 64 5 0.80573 96 5 0.67445 0.54993 0.66667 0.67750 0.67531 0.73143 0.61055 0.70711 0.61045 0.57037 0.73800 0.607407 0.76973 0.70194 0.74625 0.43519 0.50000 0.76480 0.75305 0.67938 0.71958 0.81441 0.57604 0.53563 0.75661 0.69711 0.66931 0.59259 0.68621 0.73001 0.67836 0.67799 0.57505 0.66716 0.65309 0.93827 0.69120 0.70209 0.61564 0.80761 0.68869 0.64450 0.77938 0 0.69249 0.65549 0.01356786 5 0.70234 0.68623 0.0161080 0.2847772 0.693277 insignificant 1 1 insignificant 0.450995 0.35128 insignificant 1 1 insignificant -0.01881248 0.550789 lowCoverage 1 lowCoverage 0.69249 0.65190 2.9120e-02 5 0.70234 0.66289 0.0394521 1.3326e-02 0.869618 weaklyHypermeth 4.2988e-01 1 insignificant 1.3087e-01 0.487949 insignificant 1.000000 1 insignificant -0.03894511 4.7683e-01 lowCoverage 1.000000 lowCoverage 0.69249 0.72881 -0.0410444 5 0.70234 0.74142 -0.039080 9.7125e-01 0.19988034 insignificant 1.0000e+00 1.00000 insignificant 9.2331e-01 0.2196930 insignificant 1.000000 1.0000 insignificant -0.0454679 0.36025195 lowCoverage 1.00000 lowCoverage 0.65549 0.65190 0.0139969 5 0.68623 0.66289 0.0233441 6.3746e-02 0.76667 insignificant 1.0000e+00 1 insignificant 0.29275378 0.66403 insignificant 1.000000 1 insignificant -0.0201326 0.7137747 lowCoverage 1.00000 lowCoverage 0.65549 0.72881 -0.058417 5 0.68623 0.74142 -0.05518769 9.6366e-01 0.09127356 insignificant 1.0000e+00 1.00000 insignificant 8.9957e-01 0.380753 insignificant 1.000000 1 insignificant -0.0266554 0.590431 lowCoverage 1 lowCoverage 0.65190 0.72881 -0.072370 5 0.66289 0.74142 -0.0785318 0.98511 3.0502e-02 weaklyHypometh 1 1.0000000 insignificant 0.90179 3.6436e-01 insignificant 1 1.000000 insignificant -0.0065228 0.9195479 lowCoverage 1 lowCoverage chrX 25071352 25072352 157749 ENSG00000210567,ENSG00000222603 0.70099 280 6 0.66705 103 6 0.67234 159 6 0.53333 114 4 0.73965 84 4 0.59275 146 5 0.59740 84 6 0.69960 119 6 0.57870 170 5 0.62283 93 6 0.76936 163 6 0.838889 26 4 0.71372 152 6 0.45000 12 2 0.54911 72 6 0.41667 8 0 0.74107 63 4 0.56102 120 4 0.80204 80 6 0.56079 282 6 0.46667 19 2 0.70988 63 4 0.68752 87 6 0.48770 76 4 0.69865 72 4 0.65884 129 4 0.58087 87 4 0.74210 53 4 0.66380 96 4 0.77603 89 5 0.81873 149 6 0.71972 284 6 0.76720 77 4 0.58018 83 6 0.39352 200 4 0.50000 30 2 0.75000 54 4 0.41939 158 6 0.34731 329 6 0.30981 120 4 0.37080 218 4 0.77463 199 6 0.44320 118 4 0.64540 0.53691 0.63934 0.46059 0.76580 0.67046 0.61222 0.67660 0.69580 0.63372 0.69145 0.801361 0.63483 0.41361 0.57450 0.51701 0.62561 0.48472 0.72814 0.58982 0.60998 0.49253 0.65976 0.58886 0.61981 0.66197 0.67919 0.60384 0.59853 0.59331 0.66706 0.67923 0.53526 0.52980 0.33308 0.40816 0.49660 0.27731 0.41517 0.40924 0.31538 0.62887 0.35950 4 0.63691 0.64369 -0.01319418 4 0.66021 0.68559 -0.0253858 0.9361064 0.321529 lowCoverage 1 1 lowCoverage 0.742330 0.54374 lowCoverage 1 1 lowCoverage -0.02717518 0.503025 lowCoverage 1 lowCoverage 0.63691 0.39701 2.1957e-01 6 0.66021 0.50317 0.1570433 1.3480e-09 0.253146 hypermethylated 2.6960e-07 1 hypermethylated 1.2441e-03 0.054483 weaklyHypermeth 0.177733 1 insignificant 0.07198504 3.4377e-01 lowCoverage 1.000000 lowCoverage 0.63691 0.46545 0.2005872 4 0.66021 0.44466 0.215551 2.7437e-09 0.99999992 lowCoverage 2.7437e-06 1.00000 lowCoverage 2.6686e-05 0.9999969 lowCoverage 0.026686 1.0000 lowCoverage 0.1912168 0.08462971 lowCoverage 1.00000 lowCoverage 0.64369 0.39701 0.2393851 4 0.68559 0.50317 0.1824290 8.0894e-08 0.75804 lowCoverage 2.0223e-05 1 lowCoverage 0.00404842 0.51990 lowCoverage 0.349710 1 lowCoverage 0.0991602 0.2135390 lowCoverage 1.00000 lowCoverage 0.64369 0.46545 0.214645 4 0.68559 0.44466 0.24093713 1.1728e-08 0.99999907 lowCoverage 1.1728e-05 1.00000 lowCoverage 2.7386e-05 0.999999 lowCoverage 0.027386 1 lowCoverage 0.2183919 0.057957 lowCoverage 1 lowCoverage 0.39701 0.46545 -0.025701 4 0.50317 0.44466 0.0585081 0.24709 2.2011e-02 lowCoverage 1 1.0000000 lowCoverage 0.14940 2.6539e-01 lowCoverage 1 1.000000 lowCoverage 0.1192317 0.2971788 lowCoverage 1 lowCoverage chrX 25167856 25168856 157777 ENSG00000203535 0.79025 74 5 0.66095 121 5 0.60000 46 5 0.71334 115 5 0.70527 50 6 0.74387 202 5 0.68805 60 6 0.73278 102 5 0.72814 48 5 0.77000 37 2 0.74705 152 5 1.000000 6 0 0.80561 119 6 0.74206 50 2 0.84354 49 6 0.67857 23 0 0.58333 12 0 0.82096 72 5 0.66366 74 5 0.72061 174 5 0.83333 29 1 0.72009 68 5 0.57043 72 5 0.60357 37 5 0.39116 58 5 0.78859 162 5 0.58724 60 5 0.56000 17 1 0.53528 59 5 0.70663 145 5 0.67669 101 5 0.63061 197 5 0.49928 96 6 0.50819 75 5 0.62381 84 5 0.63333 16 0 0.53038 85 6 0.58413 131 5 0.63357 68 5 0.78741 62 5 0.74108 97 5 0.60000 19 1 0.60738 96 5 0.70345 0.67900 0.63631 0.75675 0.63994 0.66831 0.71061 0.71932 0.66376 0.63351 0.72550 0.829380 0.77488 0.68958 0.79774 0.65464 0.75258 0.77708 0.69302 0.70988 0.83505 0.75187 0.64064 0.68041 0.62089 0.74061 0.67051 0.59175 0.60775 0.69088 0.72746 0.72415 0.63253 0.60825 0.69505 0.58419 0.63093 0.63486 0.70968 0.73834 0.74918 0.67010 0.67954 1 0.71628 0.67761 0.01810777 5 0.77448 0.64024 0.1342349 0.0018496 0.956503 weaklyHypermeth 1 1 insignificant 0.019670 0.98285 weaklyHypermeth 1 1 insignificant 0.10326698 0.019236 lowCoverage 1 lowCoverage 0.71628 0.62628 8.2846e-02 5 0.77448 0.47908 0.2953946 5.6572e-07 0.999643 weaklyHypermeth 8.0818e-05 1 weaklyHypermeth 5.2421e-05 0.998926 weaklyHypermeth 0.013105 1 weaklyHypermeth 0.17371708 9.6766e-05 lowCoverage 0.032255 lowCoverage 0.71717 0.69591 0.0036545 5 0.79953 0.70403 0.095504 2.5334e-02 0.77959772 weaklyHypermeth 1.0000e+00 1.00000 insignificant 5.8663e-01 0.8813061 insignificant 1.000000 1.0000 insignificant 0.0630142 0.19054699 lowCoverage 1.00000 lowCoverage 0.67761 0.62628 0.0674007 5 0.64024 0.47908 0.1611598 6.6009e-04 0.95211 weaklyHypermeth 4.5853e-02 1 weaklyHypermeth 0.01242981 0.91437 weaklyHypermeth 0.722636 1 insignificant 0.0704501 0.1146220 lowCoverage 1.00000 lowCoverage 0.67697 0.69412 -0.011440 5 0.58885 0.61947 -0.03062069 7.4692e-01 0.06903712 insignificant 1.0000e+00 1.00000 insignificant 8.7332e-01 0.129597 insignificant 1.000000 1 insignificant -0.0402528 0.451457 lowCoverage 1 lowCoverage 0.62757 0.69412 -0.077937 5 0.54752 0.61947 -0.0719461 0.51501 6.2716e-03 weaklyHypometh 1 0.3919735 insignificant 0.87763 1.3545e-02 weaklyHypometh 1 1.000000 insignificant -0.1107029 0.0435789 lowCoverage 1 lowCoverage chrX 27725273 27726273 158007 ENSG00000218243 0.86306 228 5 0.83685 62 5 0.66239 79 5 0.91451 81 5 0.87500 28 3 0.79480 143 5 0.76505 80 5 0.83662 70 5 0.88852 76 5 0.81750 67 5 0.87806 131 5 0.91667 35 5 0.798775 69 5 NA 0 0 0.873333 60 5 0.733333 31 2 0.68333 28 4 0.92179 49 5 0.73734 89 5 0.81996 198 5 0.791169 45 5 0.80159 59 5 0.82421 97 5 0.77424 56 5 0.66000 29 2 0.82549 171 5 0.74747 62 5 0.81548 34 3 0.74741 56 5 0.84254 95 5 0.77367 144 5 0.86877 300 5 0.60710 69 5 0.61152 36 3 0.69405 129 5 0.73675 44 5 0.70388 52 5 0.74584 104 5 0.88245 184 5 0.85202 112 5 0.85452 95 5 0.84641 182 5 0.83683 78 5 0.85773 0.81746 0.67527 0.91250 0.90196 0.79712 0.756784 0.81346 0.87449 0.80123 0.85537 0.91939 0.758138 NA 0.882353 0.702614 0.68083 0.90309 0.737397 0.82251 0.806044 0.80639 0.78861 0.76547 0.67843 0.80682 0.77418 0.80719 0.73823 0.826974 0.78170 0.857606 0.603726 0.54263 0.74027 0.73548 0.721286 0.73894 0.86897 0.84692 0.857633 0.84375 0.81762 3 0.82232 0.80488 0.00769147 5 0.82399 0.81619 0.0078028 0.507186 0.821242 insignificant 1 1 insignificant 0.132976 0.98451364 insignificant 1 1.00000 insignificant 0.032607 0.180537 lowCoverage 1 lowCoverage 0.82232 0.67972 0.134430 5 0.82399 0.68401 0.1399810 1.9723e-05 0.99870 weaklyHypermeth 1.2327e-03 1 weaklyHypermeth 0.01107008 0.99521 weaklyHypermeth 0.691313 1 insignificant 0.138754 0.0008671 lowCoverage 0.17342 lowCoverage 0.82232 0.87097 -0.0292765 5 0.82399 0.85339 -0.02939345 9.8179e-01 0.184036 insignificant 1.000000 1 insignificant 0.9409630 0.4014662 insignificant 1 1 insignificant -0.03250371 0.10561 lowCoverage 1 lowCoverage 0.80488 0.67972 0.126028 5 0.81619 0.68401 0.132178 1.0060e-03 0.98924 weaklyHypermeth 5.5890e-02 1 weaklyHypermeth 0.0580526 0.92794 insignificant 1.00000 1 insignificant 0.106148 0.0053211 lowCoverage 0.48374 lowCoverage 0.80488 0.87097 -0.0375190 5 0.81619 0.85339 -3.7196e-02 0.987025 0.098748 insignificant 1 1 insignificant 0.994738 0.085945 insignificant 1 1 insignificant -0.0651103 0.0022484 lowCoverage 1 lowCoverage 0.67972 0.87097 -0.163266 5 0.68401 0.85339 -0.169374 0.99930 4.0807e-03 weaklyHypometh 1 0.2400412 insignificant 0.99822 0.0048720 weaklyHypometh 1 0.40600 insignificant -0.171258 0.00059354 lowCoverage 0.19785 lowCoverage chrX 28699892 28700892 158124 ENSG00000220147 0.93402 117 6 0.94164 186 6 0.93810 57 6 0.94286 55 6 0.89334 51 4 0.96526 115 6 0.81446 54 6 0.94333 109 6 0.85707 51 4 0.94613 82 4 0.93132 321 6 0.86184 38 4 0.941043 170 6 NA 0 0 0.972222 56 6 0.555556 13 0 0.81667 21 3 0.92202 32 4 0.91582 158 6 0.93274 74 6 0.948413 46 6 0.87500 21 2 0.93737 97 6 0.83333 22 4 1.00000 8 0 0.95994 284 6 0.95000 65 6 1.00000 19 2 0.97242 160 6 0.94677 285 6 0.98691 212 6 0.92885 136 6 0.89057 151 6 0.88878 121 6 0.89695 122 6 1.00000 6 0 0.95833 31 2 0.90743 335 6 0.89167 43 5 0.95055 133 6 1.00000 45 6 1.00000 8 0 0.97222 48 5 0.91929 0.93386 0.95011 0.93084 0.90239 0.95354 0.786460 0.92921 0.87552 0.93194 0.92489 0.83561 0.951358 NA 0.973545 0.507937 0.75556 0.91412 0.940454 0.91475 0.932351 0.92063 0.90792 0.84127 0.99280 0.95858 0.93810 1.00000 0.97427 0.943278 0.97945 0.933515 0.856630 0.88656 0.86467 0.98639 0.934524 0.89101 0.87619 0.95609 1.000000 0.99752 0.97354 0 0.92386 0.95424 -0.03061589 6 0.92754 0.95705 -0.0295100 0.994906 0.018185 weaklyHypometh 1 1 insignificant 0.998846 0.00014340 weaklyHypometh 1 0.14340 insignificant -0.048841 0.069277 lowCoverage 1 lowCoverage 0.92386 0.88381 0.038447 6 0.92754 0.89852 0.0290227 1.4158e-02 0.93865 weaklyHypermeth 5.2436e-01 1 insignificant 0.59145639 0.64327 insignificant 1.000000 1 insignificant -0.027603 0.3452718 lowCoverage 1.00000 lowCoverage 0.92386 0.96029 -0.0345657 6 0.92754 0.95708 -0.02954157 9.8008e-01 0.040628 weaklyHypometh 1.000000 1 insignificant 0.9992413 0.0027829 weaklyHypometh 1 1 insignificant -0.06681150 0.03959 lowCoverage 1 lowCoverage 0.95424 0.88381 0.070548 6 0.95705 0.89852 0.058533 4.5493e-06 0.99933 weaklyHypermeth 5.0548e-04 1 weaklyHypermeth 0.0075233 0.99715 weaklyHypermeth 0.47021 1 insignificant 0.021238 0.3825978 lowCoverage 1.00000 lowCoverage 0.95424 0.96029 -0.0069084 6 0.95705 0.95708 -3.1590e-05 0.591909 0.269110 insignificant 1 1 insignificant 0.850626 0.426940 insignificant 1 1 insignificant -0.0179702 0.4850003 lowCoverage 1 lowCoverage 0.88381 0.96029 -0.072144 6 0.89852 0.95708 -0.058564 0.99943 3.1903e-05 weaklyHypometh 1 0.0045576 weaklyHypometh 0.99793 0.0099151 weaklyHypometh 1 0.70822 insignificant -0.039208 0.18650615 lowCoverage 1.00000 lowCoverage chrX 29148155 29149155 158174 ENSG00000201356 0.86121 228 5 0.73156 98 5 0.61464 89 5 0.82000 150 5 0.77862 121 5 0.79015 149 5 0.80058 84 5 0.80693 117 5 0.80527 87 5 0.76703 82 5 0.81667 159 5 0.71005 53 5 0.802820 157 5 0.85556 67 5 0.918922 111 5 0.798319 37 2 0.72582 91 5 0.77420 245 5 0.79545 101 5 0.68635 224 5 0.619365 32 5 0.83476 41 5 0.70055 146 5 0.64267 66 5 0.77375 54 5 0.79777 150 5 0.71296 78 5 0.81818 98 5 0.75060 122 5 0.81607 103 5 0.72300 134 5 0.79678 250 5 0.73083 67 5 0.64274 79 5 0.52284 140 5 0.81136 42 2 0.75480 69 5 0.73875 95 5 0.85481 230 5 0.75584 144 5 0.82179 262 5 0.85068 229 5 0.80818 151 5 0.85768 0.71905 0.61961 0.80781 0.78403 0.78863 0.790590 0.79789 0.80752 0.75781 0.80997 0.70837 0.793173 0.84306 0.912554 0.798582 0.72422 0.77767 0.786384 0.69324 0.644444 0.83333 0.70501 0.65234 0.76936 0.78389 0.74075 0.81294 0.73171 0.811988 0.72331 0.790528 0.738694 0.65610 0.56232 0.71066 0.779491 0.73498 0.85160 0.74471 0.808280 0.84358 0.81093 5 0.78082 0.77002 0.01891408 5 0.78200 0.76306 0.0189341 0.331941 0.913471 insignificant 1 1 insignificant 0.256782 0.72795728 insignificant 1 1.00000 insignificant 0.034136 0.188250 lowCoverage 1 lowCoverage 0.78082 0.63618 0.150062 5 0.78200 0.64628 0.1357129 1.1618e-04 0.77905 weaklyHypermeth 6.4546e-03 1 weaklyHypermeth 0.01248650 0.66078 weaklyHypermeth 0.693695 1 insignificant 0.082787 0.1090883 lowCoverage 1.00000 lowCoverage 0.78082 0.81693 -0.0428543 5 0.78200 0.82633 -0.04433313 9.7285e-01 0.071711 insignificant 1.000000 1 insignificant 0.9684962 0.2221636 insignificant 1 1 insignificant -0.03525209 0.15928 lowCoverage 1 lowCoverage 0.77002 0.63618 0.131604 5 0.76306 0.64628 0.116779 1.3973e-02 0.74318 weaklyHypermeth 4.9903e-01 1 insignificant 0.1641415 0.88055 insignificant 1.00000 1 insignificant 0.048651 0.3282602 lowCoverage 1.00000 lowCoverage 0.77002 0.81693 -0.0694267 5 0.76306 0.82633 -6.3267e-02 0.990396 0.034246 weaklyHypometh 1 1 insignificant 0.940200 0.033449 weaklyHypometh 1 1 insignificant -0.0693880 0.0234321 weaklyHypometh 1 insignificant 0.63618 0.81693 -0.199042 5 0.64628 0.82633 -0.180046 0.92442 7.7152e-03 weaklyHypometh 1 0.3614359 insignificant 0.91127 0.0035892 weaklyHypometh 1 0.35892 insignificant -0.118039 0.03706211 lowCoverage 1.00000 lowCoverage chrX 30475154 30476154 158348 ENSG00000216183 0.78980 321 7 0.64620 257 6 0.75014 130 6 0.83675 186 6 0.50000 93 6 0.65788 268 6 0.57082 87 3 0.41792 168 6 0.63345 78 5 0.85185 40 5 0.81004 326 6 0.53958 27 2 0.713507 90 5 0.61611 75 6 0.815179 63 5 0.625000 32 3 0.80000 829 2 0.76915 213 7 0.81768 136 6 0.58222 365 6 0.576720 45 5 0.74167 26 4 0.69453 144 6 0.66321 81 5 0.87820 41 5 0.84920 225 6 0.68855 110 6 0.78912 21 2 0.83755 112 6 0.77922 208 6 0.81799 218 6 0.83313 351 6 0.76808 124 6 0.67015 123 6 0.75475 158 6 0.66667 14 0 0.60274 85 6 0.51360 249 6 0.72065 430 6 0.63323 236 6 0.79133 307 7 0.73678 159 6 0.72212 273 6 0.85899 0.71728 0.73764 0.82153 0.71340 0.78081 0.703326 0.78429 0.76042 0.86202 0.86421 0.56382 0.781476 0.80335 0.870709 0.702842 0.80842 0.86276 0.827805 0.83019 0.825568 0.75051 0.78777 0.73449 0.86721 0.85785 0.71889 0.75370 0.77487 0.779526 0.81198 0.818739 0.749384 0.73052 0.77864 0.75602 0.744508 0.78705 0.83077 0.81293 0.835475 0.78747 0.86199 1 0.86047 0.82301 0.01206283 6 0.68892 0.68576 0.0031658 0.273823 0.571417 insignificant 1 1 insignificant 0.804605 0.09776369 insignificant 1 1.00000 insignificant -0.075259 0.059960 insignificant 1 insignificant 0.86047 0.79681 0.051579 6 0.68892 0.62547 0.0634529 2.7418e-03 0.86760 weaklyHypermeth 1.2463e-01 1 insignificant 0.14223349 0.55896 insignificant 1.000000 1 insignificant 0.024498 0.6203126 insignificant 1.00000 insignificant 0.86047 0.88327 -0.0067467 6 0.68892 0.68540 0.00352543 5.6860e-01 0.401778 insignificant 1.000000 1 insignificant 0.8829107 0.2436868 insignificant 1 1 insignificant -0.03365833 0.38850 insignificant 1 insignificant 0.82301 0.79681 0.037733 6 0.68576 0.62547 0.060287 4.5531e-03 0.79620 weaklyHypermeth 1.8971e-01 1 insignificant 0.0237465 0.84460 weaklyHypermeth 1.00000 1 insignificant 0.099758 0.0603892 insignificant 1.00000 insignificant 0.82301 0.88327 -0.0199462 6 0.68576 0.68540 3.5961e-04 0.317753 0.086026 insignificant 1 1 insignificant 0.245808 0.090399 insignificant 1 1 insignificant 0.0416008 0.2762092 insignificant 1 insignificant 0.79681 0.88327 -0.058488 6 0.62547 0.68540 -0.059928 0.97640 2.4001e-02 weaklyHypometh 1 0.8571686 insignificant 0.99291 0.1495622 insignificant 1 1.00000 insignificant -0.058157 0.24507644 insignificant 1.00000 insignificant chrX 31358788 31359788 158449 DMD ENSG00000198947 0.66715 245 8 0.61058 57 4 0.65278 32 3 0.70784 162 10 0.77891 50 6 0.75570 90 7 0.60582 74 6 0.71657 65 6 0.77063 44 4 0.63333 38 6 0.86730 120 7 0.83333 21 1 0.853632 47 4 0.67177 38 2 0.785714 48 4 0.826667 17 2 0.33333 21 1 0.71923 250 10 0.56508 38 3 0.74325 116 7 0.655612 25 2 0.62500 8 0 0.71294 154 8 0.80556 18 1 0.68333 41 3 0.62624 123 10 0.61905 30 2 0.75694 27 2 0.74819 70 6 0.65839 126 10 0.65500 89 7 0.60714 62 6 0.70868 93 6 0.57116 41 3 0.55060 67 5 0.33333 5 0 0.73810 35 3 0.57601 80 9 0.68730 281 11 0.70706 195 8 0.66871 173 9 0.72969 207 9 0.73510 195 10 0.62346 0.57846 0.50532 0.65052 0.65502 0.69742 0.667246 0.64891 0.66194 0.41489 0.77680 0.74468 0.838789 0.58815 0.676292 0.916337 0.64186 0.66623 0.566565 0.70847 0.587386 0.56383 0.69086 0.78014 0.67376 0.55704 0.55319 0.49470 0.68309 0.719052 0.74704 0.661601 0.643528 0.56537 0.51330 0.53645 0.642553 0.64016 0.69772 0.79178 0.668196 0.68786 0.69344 0 0.70375 0.69858 0.01225409 5 0.71978 0.65225 0.0675222 0.035729 0.838744 weaklyHypermeth 1 1 insignificant 0.126792 0.83441138 insignificant 1 1.00000 insignificant 0.025481 0.446290 lowCoverage 1 lowCoverage 0.70375 0.64174 0.074331 4 0.71978 0.60667 0.1131047 6.7557e-03 0.98334 lowCoverage 2.7023e-01 1 lowCoverage 0.14048112 0.99871 lowCoverage 1.000000 1 lowCoverage 0.125284 0.0925786 lowCoverage 1.00000 lowCoverage 0.70375 0.69458 -0.0390260 5 0.71978 0.71672 0.00306080 7.2208e-01 0.152311 insignificant 1.000000 1 insignificant 0.8518574 0.3671175 insignificant 1 1 insignificant -0.00064174 0.98324 insignificant 1 insignificant 0.69858 0.64174 0.070563 4 0.65225 0.60667 0.045582 1.1666e-01 0.87500 lowCoverage 1.0000e+00 1 lowCoverage 0.4277487 0.97854 lowCoverage 1.00000 1 lowCoverage 0.099803 0.1556828 lowCoverage 1.00000 lowCoverage 0.69858 0.69458 -0.0497827 5 0.65225 0.71672 -6.4461e-02 0.957737 0.040355 weaklyHypometh 1 1 insignificant 0.846299 0.162515 insignificant 1 1 insignificant -0.0261225 0.2571410 lowCoverage 1 lowCoverage 0.64174 0.69458 -0.112969 4 0.60667 0.71672 -0.110044 0.99114 2.6416e-03 lowCoverage 1 0.1761039 lowCoverage 0.99209 0.1357318 lowCoverage 1 1.00000 lowCoverage -0.125926 0.08535152 lowCoverage 1.00000 lowCoverage chrX 32452117 32453117 158592 DMD ENSG00000198947 0.89182 97 5 0.69180 103 5 0.61364 27 1 0.83772 102 5 0.84057 41 5 0.84603 126 5 0.90476 24 1 0.84934 93 5 0.81238 37 5 0.63646 43 5 0.73851 145 5 0.63333 22 1 0.896732 82 5 0.66254 44 5 0.724725 64 5 0.800000 13 0 NA 0 0 0.88755 109 5 0.74778 44 2 0.87129 104 5 0.812500 17 1 0.85333 28 5 0.78718 73 5 0.70000 35 5 0.86571 34 5 0.93031 75 5 0.96230 49 4 0.67284 18 1 0.63411 64 5 0.71431 83 5 0.75391 86 5 0.86899 224 5 0.80344 92 5 0.64000 51 5 0.62963 49 5 0.92857 23 0 0.60989 51 5 0.82952 86 5 0.87745 66 5 0.85057 104 5 0.84657 113 5 0.74667 46 5 0.75609 115 5 0.85509 0.72461 0.64483 0.86420 0.85204 0.86427 0.890071 0.85069 0.83105 0.68467 0.86059 0.76649 0.913364 0.69355 0.769815 0.833333 NA 0.89917 0.770272 0.83273 1.000000 0.87943 0.82420 0.86596 0.87857 0.92085 0.94820 0.51300 0.82848 0.736650 0.77259 0.834077 0.824819 0.67589 0.77879 0.91755 0.624259 0.84807 0.89145 0.86496 0.861363 0.78759 0.74597 1 0.82045 0.82188 0.00052043 5 0.79880 0.76301 0.0357838 0.069110 0.597629 insignificant 1 1 insignificant 0.671093 0.40519392 insignificant 1 1.00000 insignificant -0.012767 0.737284 lowCoverage 1 lowCoverage 0.82053 0.78409 0.045377 5 0.79866 0.72767 0.0709881 2.8478e-02 0.86126 weaklyHypermeth 9.4926e-01 1 insignificant 0.07634000 0.89465 insignificant 1.000000 1 insignificant 0.043350 0.4821543 lowCoverage 1.00000 lowCoverage 0.82148 0.81982 -0.0119067 5 0.80759 0.82199 -0.01439287 8.2657e-01 0.475670 insignificant 1.000000 1 insignificant 0.9082391 0.4186612 insignificant 1 1 insignificant -0.03194460 0.38263 lowCoverage 1 lowCoverage 0.82120 0.78409 0.041421 5 0.73668 0.72767 0.009006 3.6239e-01 0.96484 insignificant 1.0000e+00 1 insignificant 0.2442138 0.99617 insignificant 1.00000 1 insignificant 0.056117 0.3878462 lowCoverage 1.00000 lowCoverage 0.82637 0.81982 -0.0091912 5 0.81174 0.82199 -1.0246e-02 0.664213 0.472288 insignificant 1 1 insignificant 0.344873 0.843130 insignificant 1 1 insignificant -0.0191781 0.6409878 lowCoverage 1 lowCoverage 0.78551 0.81982 -0.056470 5 0.75981 0.82199 -0.062171 0.91585 9.8904e-03 weaklyHypometh 1 0.4120990 insignificant 0.97115 0.0369791 weaklyHypometh 1 1.00000 insignificant -0.075295 0.24889000 lowCoverage 1.00000 lowCoverage chrX 33578606 33579606 158692 ENSG00000221404 0.57986 67 7 0.43959 138 7 0.47381 36 5 0.50911 81 7 0.48958 36 3 0.55445 76 7 0.45556 62 7 0.69261 115 7 0.60417 44 7 0.70312 44 5 0.53503 176 7 0.41667 18 0 0.578125 58 8 0.42679 48 7 0.421429 30 2 0.250000 26 0 NA 0 0 0.65417 37 5 0.74762 37 7 0.68980 39 7 0.733333 15 0 0.76190 11 0 0.63929 49 7 0.64167 42 7 0.51042 28 0 0.59057 89 7 0.73333 26 4 0.62500 8 0 0.54167 49 7 0.66535 105 7 0.53400 78 7 0.44444 64 7 0.47802 92 7 0.41837 43 7 0.40659 98 8 0.50000 14 0 0.50893 36 2 0.54271 72 7 0.62041 46 7 0.58534 56 7 0.52043 109 7 0.56250 14 1 0.65561 54 7 0.66966 0.46267 0.44590 0.60700 0.55513 0.62372 0.542906 0.66224 0.69487 0.76731 0.62118 0.47179 0.644231 0.48549 0.388462 0.246154 NA 0.67949 0.737949 0.68527 0.726177 0.77949 0.73626 0.74564 0.59872 0.65294 0.72618 0.66154 0.62344 0.660275 0.60451 0.488889 0.508707 0.39451 0.45816 0.40769 0.543956 0.59936 0.62418 0.55914 0.562574 0.62308 0.61841 0 0.58904 0.64184 -0.04720966 7 0.53581 0.57245 -0.0366341 0.848118 0.104667 insignificant 1 1 insignificant 0.922894 0.01520251 weaklyHypometh 1 1.00000 insignificant -0.080442 0.057148 lowCoverage 1 lowCoverage 0.58904 0.51549 0.082136 7 0.53581 0.45872 0.0770960 8.0383e-03 0.98995 weaklyHypermeth 3.0916e-01 1 insignificant 0.04722481 0.97042 weaklyHypermeth 1.000000 1 insignificant 0.062202 0.1013039 insignificant 1.00000 insignificant 0.58904 0.59498 -0.0043597 7 0.53581 0.53591 -0.00010280 4.5272e-01 0.156478 insignificant 1.000000 1 insignificant 0.7409993 0.0893809 insignificant 1 1 insignificant -0.05088722 0.18883 insignificant 1 insignificant 0.64184 0.51549 0.122961 7 0.57245 0.45872 0.113730 1.9104e-04 0.99976 weaklyHypermeth 1.1940e-02 1 weaklyHypermeth 0.0007982 0.99767 weaklyHypermeth 0.08869 1 weaklyHypermeth 0.142644 0.0010835 lowCoverage 0.29268 lowCoverage 0.64184 0.59498 0.0366502 7 0.57245 0.53591 3.6531e-02 0.145043 0.373323 insignificant 1 1 insignificant 0.398702 0.448161 insignificant 1 1 insignificant 0.0295548 0.4340263 lowCoverage 1 lowCoverage 0.51549 0.59498 -0.084934 7 0.45872 0.53591 -0.077199 0.99791 8.7307e-03 weaklyHypometh 1 0.3795964 insignificant 0.99845 0.0246589 weaklyHypometh 1 1.00000 insignificant -0.113089 0.00657328 weaklyHypometh 0.93904 insignificant chrX 37650535 37651535 158813 ENSG00000206983 0.57320 279 9 0.29083 119 9 0.26038 206 9 0.36071 127 9 0.30204 214 9 0.25784 176 9 0.18111 155 6 0.47912 137 6 0.33865 281 6 0.29799 212 6 0.33038 177 9 0.40909 44 6 0.034649 148 6 0.24411 61 5 0.084596 76 6 0.055556 26 2 0.62203 121 9 0.40189 100 5 0.23410 58 6 0.48964 337 9 0.056122 28 3 0.24921 83 6 0.25577 74 5 0.57949 168 9 0.33924 97 6 0.48454 257 9 0.14467 103 6 0.32008 72 6 0.26703 96 6 0.18900 204 9 0.48132 282 9 0.13364 349 9 0.31835 137 6 0.47531 52 6 0.35038 103 2 0.53535 74 4 0.16273 103 9 0.45233 302 9 0.54852 360 9 0.36044 115 9 0.21281 215 9 0.45120 60 6 0.22612 154 8 0.51819 0.13442 0.12177 0.20375 0.25284 0.11898 0.045157 0.36948 0.32882 0.15214 0.21537 0.13006 0.030875 0.13816 0.075383 0.049505 0.39469 0.16040 0.093496 0.40966 0.080976 0.20603 0.17886 0.54500 0.36584 0.36901 0.10002 0.47987 0.39386 0.039507 0.39239 0.068664 0.071111 0.30803 0.31052 0.51845 0.024443 0.38980 0.48234 0.19847 0.077517 0.44029 0.15058 5 0.27940 0.30502 -0.00953719 9 0.32878 0.31190 0.0168738 0.250324 0.807985 insignificant 1 1 insignificant 0.051759 0.35893517 insignificant 1 1.00000 insignificant 0.020720 0.722854 insignificant 1 insignificant 0.27949 0.31647 -0.021661 9 0.36531 0.35878 0.0065288 2.5835e-01 0.51905 insignificant 1.0000e+00 1 insignificant 0.67152695 0.57776 insignificant 1.000000 1 insignificant -0.070013 0.3094900 insignificant 1.00000 insignificant 0.27949 0.37611 -0.0480120 9 0.36531 0.40723 -0.04192309 6.3994e-01 0.052438 insignificant 1.000000 1 insignificant 0.7032590 0.2493071 insignificant 1 1 insignificant -0.04742069 0.54108 insignificant 1 insignificant 0.30536 0.31647 -0.021155 9 0.34656 0.35878 -0.012220 5.8859e-01 0.42810 insignificant 1.0000e+00 1 insignificant 0.8361854 0.15899 insignificant 1.00000 1 insignificant -0.090733 0.2282869 insignificant 1.00000 insignificant 0.30536 0.37611 -0.0427330 9 0.34656 0.40723 -6.0672e-02 0.981767 0.161618 insignificant 1 1 insignificant 0.950899 0.326868 insignificant 1 1 insignificant -0.0681412 0.4133856 insignificant 1 insignificant 0.31647 0.37611 -0.008634 9 0.35878 0.40723 -0.048452 0.66068 7.9470e-02 insignificant 1 1.0000000 insignificant 0.56366 0.5386846 insignificant 1 1.00000 insignificant 0.022592 0.79624320 insignificant 1.00000 insignificant chrX 39320901 39321901 158991 ENSG00000207122 0.77510 294 7 0.79190 276 8 0.67240 245 7 0.88435 131 7 0.75095 192 7 0.90026 276 8 0.84297 311 7 0.76228 312 8 0.71915 287 7 0.82545 168 7 0.77663 501 8 0.70520 71 6 0.810888 221 7 0.82689 103 7 0.891800 182 6 0.987013 82 7 0.40000 8 1 0.82568 116 6 0.88441 457 7 0.89291 403 8 0.654762 69 5 0.76766 75 6 0.80266 121 8 0.78010 227 8 0.77030 74 6 0.77929 516 7 0.72681 201 8 0.76409 189 8 0.68288 304 8 0.85952 278 8 0.72658 494 8 0.82516 360 7 0.71143 185 8 0.49641 170 7 0.49706 445 7 0.83333 8 0 0.61454 221 8 0.55263 526 8 0.74623 508 8 0.85016 111 7 0.79597 209 7 0.75081 183 4 0.70067 100 6 0.82413 0.82833 0.65166 0.85358 0.80002 0.90185 0.850859 0.79880 0.77874 0.86678 0.82411 0.78600 0.875008 0.87147 0.894953 0.973763 0.78940 0.81442 0.902244 0.90493 0.859784 0.84225 0.88995 0.84130 0.77330 0.77872 0.70622 0.80938 0.74221 0.914198 0.68723 0.886469 0.714248 0.55799 0.42074 0.83433 0.678113 0.63518 0.74360 0.85483 0.726464 0.71573 0.68976 4 0.83995 0.79346 0.04441106 7 0.82821 0.77179 0.0564299 0.003896 0.866349 weaklyHypermeth 1 1 insignificant 0.127748 0.91516357 insignificant 1 1.00000 insignificant 0.034661 0.282679 insignificant 1 insignificant 0.83995 0.56637 0.268954 7 0.82821 0.63615 0.1920680 7.4462e-16 0.98639 hypermethylated 1.8616e-13 1 hypermethylated 0.00001636 0.98512 hypermethylated 0.003272 1 hypermethylated 0.178745 0.0195809 weaklyHypermeth 1.00000 insignificant 0.83991 0.73807 0.1021517 7 0.80674 0.76241 0.04433090 4.1223e-05 0.769757 weaklyHypermeth 0.020612 1 weaklyHypermeth 0.0013393 0.6321570 weaklyHypermeth 1 1 insignificant 0.02754328 0.46885 insignificant 1 insignificant 0.79353 0.56564 0.223601 7 0.79461 0.57253 0.222074 1.1304e-07 0.83444 hypermethylated 1.6149e-05 1 hypermethylated 0.0032107 0.98033 weaklyHypermeth 0.22934 1 insignificant 0.144084 0.0448073 weaklyHypermeth 1.00000 insignificant 0.79310 0.73807 0.0609836 7 0.74326 0.76241 -1.9153e-02 0.012384 0.213564 weaklyHypermeth 1 1 insignificant 0.018674 0.279732 weaklyHypermeth 1 1 insignificant -0.0071176 0.8201971 insignificant 1 insignificant 0.56609 0.73807 -0.184959 7 0.59067 0.76241 -0.171746 0.95390 1.9863e-04 weaklyHypometh 1 0.0180571 weaklyHypometh 0.93954 0.0075962 weaklyHypometh 1 0.58433 insignificant -0.151202 0.03987236 weaklyHypometh 1.00000 insignificant chrX 39422254 39423254 159007 ENSG00000207122 0.76303 418 5 0.5715113 71 4 0.820635 107 6 0.7604489 202 5 0.6760372 94 5 0.957762 169 5 0.8351490 155 5 0.85552 110 6 0.78882 77 6 0.91898 66 4 0.81177 248 6 0.742857 16 1 0.964444 77 3 0.941667 31 2 0.799720 57 3 0.605263 25 1 NA 0 0 0.522438 274 5 0.7457396 208 5 0.709695 346 5 0.857143 23 2 0.8014706 33 3 0.932141 81 5 0.796261 103 5 0.91443 86 4 0.778897 209 6 0.82602 84 5 0.712406 38 2 0.898307 175 5 0.8227583 109 6 0.732064 187 6 0.8431882 302 5 0.479085 78 4 0.446362 214 6 0.72136 351 6 0.488889 19 2 0.448810 51 4 0.629185 281 6 0.812176 484 6 0.631507 173 5 0.857634 445 6 0.81980 482 5 0.766852 137 5 0.82578 0.5493778 0.726953 0.9243414 0.7508304 0.937640 0.792949 0.90916 0.7322539 0.792629 0.84929 0.7001414 0.8996700 0.889109 0.779308 0.5628137 NA 0.676085 0.8362820 0.7997645 0.9901204 0.7109270 0.8304116 0.948486 0.82151 0.85636 0.84788 0.879774 0.78122 0.9028313 0.77000 0.819847 0.443495 0.381578 0.6459031 0.477389 0.515559 0.615253 0.744621 0.770884 0.762043 0.71741 0.763150 1 0.82460 0.834502 -0.01491076 5 0.717914 0.75571 -0.0377993 0.9577155 4.5861e-01 insignificant 1 1.000000 insignificant 0.999346 0.14794801 insignificant 1 1.00000 insignificant -0.04775763 0.180757 lowCoverage 1 lowCoverage 0.82490 0.56250 0.2162969 5 0.797682 0.40982 0.3878627 1.8832e-07 9.7990e-01 hypermethylated 4.6183e-06 1.0000e+00 hypermethylated 1.1674e-02 0.985855 weaklyHypermeth 1.7960e-01 1 insignificant 0.242884 0.0014804 lowCoverage 0.058522 lowCoverage 0.82484 0.786504 0.0348389 5 0.772392 0.677447 0.0949453 3.0089e-01 4.1972e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1806e-01 0.74017527 insignificant 1.0000e+00 1.00000 insignificant 0.00090598 0.98555593 lowCoverage 1.00000 lowCoverage 0.834034 0.56193 0.2371113 5 0.755713 0.36884 0.3868757 1.1272e-06 0.999753 hypermethylated 3.6362e-05 1 hypermethylated 2.3885e-04 0.99973 hypermethylated 7.4641e-03 1 hypermethylated 0.29064160 0.00072165 lowCoverage 0.040092 lowCoverage 0.833684 0.786628 0.0416191 5 0.69464 0.739947 -0.0453055 1.7079e-02 3.3562e-01 weaklyHypermeth 4.1656e-01 1.0000000 insignificant 8.8699e-02 0.8839073 insignificant 1.0000000 1 insignificant 0.048664 0.3094672 lowCoverage 1.00000 lowCoverage 0.56250 0.786171 -0.194626 5 0.40982 0.657730 -0.247911 0.9936274 9.4173e-06 weaklyHypometh 1 8.0796e-04 weaklyHypometh 0.986310 4.6199e-02 weaklyHypometh 1 0.888449 insignificant -0.241978 0.0031795 lowCoverage 0.24458 lowCoverage chrX 39499025 39500025 159021 ENSG00000207122 0.71507 316 9 0.6763688 64 5 0.490615 98 6 0.4879167 115 6 0.7659128 60 6 0.921475 188 8 0.5927249 77 7 0.80064 112 7 0.56836 64 5 0.76542 43 4 0.82674 234 10 0.800000 9 1 0.600323 158 6 0.747222 32 3 0.580972 46 4 0.333333 3 0 0.708333 9 0 0.390349 254 7 0.6941140 178 9 0.673314 246 9 0.700000 42 4 0.1201681 59 4 0.746667 59 4 0.427619 80 7 0.70649 157 9 0.743531 197 9 0.72130 100 6 0.631083 35 3 0.775424 199 7 0.7611271 105 7 0.639617 224 9 0.8166256 269 9 0.544444 108 6 0.482887 215 9 0.65162 144 6 0.350595 58 6 0.377870 75 4 0.588363 265 9 0.431077 301 9 0.210103 182 9 0.456013 283 9 0.52100 204 7 0.384166 160 8 0.69365 0.6235239 0.478536 0.2851080 0.8256035 0.920850 0.638801 0.76769 0.6820080 0.747675 0.79965 0.9494169 0.6443148 0.896091 0.594650 0.6681316 0.742839 0.284859 0.7623925 0.5907920 0.9351852 0.1926837 0.9379244 0.658554 0.69963 0.77361 0.73302 0.608466 0.75442 0.7500281 0.64482 0.825042 0.624102 0.543511 0.4985963 0.386508 0.600917 0.438944 0.324573 0.146110 0.374070 0.34490 0.219311 1 0.63400 0.668852 -0.03393540 9 0.669476 0.52328 0.1461975 0.9995651 6.5757e-01 insignificant 1 1.000000 insignificant 0.989820 0.68860051 insignificant 1 1.00000 insignificant 0.00782250 0.906139 insignificant 1 insignificant 0.63407 0.39468 0.2342654 8 0.687267 0.45485 0.2324166 1.2963e-06 9.9999e-01 hypermethylated 2.8180e-05 1.0000e+00 hypermethylated 4.9784e-04 0.995558 hypermethylated 1.3829e-02 1 hypermethylated 0.157663 0.0227056 weaklyHypermeth 0.452768 insignificant 0.63396 0.374336 0.2597780 9 0.670243 0.436378 0.2338647 2.2772e-16 9.9904e-01 hypermethylated 2.2772e-13 1.000000 hypermethylated 6.1679e-08 0.99960763 hypermethylated 6.1679e-05 1.00000 hypermethylated 0.25648836 0.00365581 weaklyHypermeth 0.40620 insignificant 0.671053 0.39468 0.2726796 8 0.732590 0.45485 0.2777401 3.6957e-08 0.999957 hypermethylated 1.6068e-06 1 hypermethylated 2.1751e-04 0.99989 hypermethylated 7.0164e-03 1 hypermethylated 0.14984066 0.06125026 insignificant 0.900739 insignificant 0.670611 0.374336 0.3119140 9 0.66599 0.436378 0.2296133 1.9659e-15 9.9945e-01 hypermethylated 1.9659e-12 1.0000000 hypermethylated 1.3408e-06 0.9999904 hypermethylated 0.0013408 1 hypermethylated 0.248666 0.0068134 weaklyHypermeth 0.65838 insignificant 0.39468 0.372217 0.034576 8 0.45485 0.408587 0.046263 0.0087547 4.8091e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.019665 4.9760e-01 weaklyHypermeth 1 1.000000 insignificant 0.098825 0.2008032 insignificant 1.00000 insignificant chrX 39499601 39500601 159022 ENSG00000207122 0.75272 488 9 0.7467850 239 6 0.540725 128 7 0.8364493 222 9 0.7688967 116 7 0.894207 295 9 0.7101684 110 7 0.81440 214 7 0.56309 112 7 0.85529 65 7 0.84991 513 10 0.666667 11 0 0.634757 231 7 0.765388 72 6 0.719438 91 7 0.566667 14 2 NA 0 0 0.566597 334 7 0.6937502 591 9 0.791680 512 9 0.812637 80 6 0.3158974 37 3 0.926793 101 7 0.656962 157 9 0.73806 126 7 0.751118 527 9 0.58827 177 7 0.580316 71 5 0.794414 541 9 0.7137300 259 7 0.774215 545 9 0.8781895 553 9 0.254321 196 9 0.380411 295 9 0.75779 422 7 0.333333 12 2 0.058055 213 7 0.451581 596 9 0.648842 355 9 0.653426 179 9 0.690768 321 8 0.79529 300 6 0.498488 165 9 0.91033 0.7229814 0.522033 0.8659310 0.8236791 0.899806 0.765675 0.80208 0.6603782 0.895211 0.84129 0.4827138 0.5814989 0.654601 0.690886 0.7185128 NA 0.500349 0.6836031 0.8605913 0.8839802 0.5612898 0.8896705 0.723025 0.81755 0.78521 0.70284 0.638756 0.80038 0.7568522 0.75181 0.904858 0.042775 0.439678 0.4726305 NA 0.030500 0.414930 0.687707 0.743189 0.769245 0.78654 0.545363 3 0.73209 0.768988 -0.03447772 9 0.794389 0.75157 0.0428194 0.9998686 1.1786e-01 insignificant 1 1.000000 insignificant 0.971084 0.24264472 insignificant 1 1.00000 insignificant 0.01214754 0.821658 insignificant 1 insignificant 0.73193 0.35813 0.3713993 9 0.752722 0.35581 0.3969143 5.8117e-16 1.0000e+00 hypermethylated 3.8745e-14 1.0000e+00 hypermethylated 2.3448e-09 1.000000 hypermethylated 7.8158e-07 1 hypermethylated 0.350450 0.0126893 weaklyHypermeth 0.325367 insignificant 0.73197 0.600455 0.0707831 9 0.753267 0.678317 0.0749498 2.2381e-03 9.0334e-01 weaklyHypermeth 7.4603e-02 1.000000 weaklyHypermeth 5.1163e-02 0.86308634 insignificant 1.0000e+00 1.00000 insignificant 0.06566867 0.26564618 insignificant 1.00000 insignificant 0.768916 0.35834 0.4053683 9 0.728985 0.38815 0.3408308 2.9344e-17 1.000000 hypermethylated 4.8906e-15 1 hypermethylated 9.5128e-09 1.00000 hypermethylated 3.1709e-06 1 hypermethylated 0.33830222 0.01360685 weaklyHypermeth 0.312113 insignificant 0.769886 0.600455 0.1076280 9 0.80188 0.678317 0.1235665 1.4094e-06 9.9963e-01 weaklyHypermeth 1.4094e-04 1.0000000 weaklyHypermeth 4.8875e-02 0.9947656 weaklyHypermeth 1.0000000 1 insignificant 0.053521 0.4393527 insignificant 1.00000 insignificant 0.35855 0.600455 -0.283474 9 0.42697 0.678317 -0.251347 0.9987841 5.2338e-06 hypomethylated 1 5.4307e-04 hypomethylated 0.999998 1.5817e-04 hypomethylated 1 0.017600 hypomethylated -0.284781 0.0301971 weaklyHypometh 0.77112 insignificant chrX 39586092 39587092 159039 ENSG00000219004 0.61890 293 5 0.4701170 110 5 0.692244 107 5 0.5423077 218 5 0.4811905 57 5 0.717705 170 5 0.5197641 106 5 0.76817 98 5 0.74013 92 5 0.62459 42 5 0.61117 139 5 0.850000 18 0 0.636899 146 5 0.000000 2 0 0.566667 38 3 0.632381 43 5 0.643697 73 5 0.587706 183 5 0.8400358 128 5 0.604019 200 5 0.726190 28 2 0.7026754 72 5 0.612508 89 5 0.674275 55 5 0.78414 69 5 0.646852 209 5 0.45259 84 5 0.650000 56 4 0.778038 141 5 0.6142375 157 5 0.686784 171 5 0.5916933 282 5 0.939474 43 3 0.440472 130 5 0.53623 69 1 0.749301 55 3 0.715241 76 5 0.655608 172 5 0.776944 395 5 0.659542 125 5 0.727038 316 5 0.75002 257 5 0.678462 133 5 0.75425 0.4787147 0.699266 0.5376594 0.4534845 0.707869 0.518511 0.76186 0.7272248 0.636079 0.62787 0.8321168 0.6321034 NA 0.571776 0.6466458 0.661289 0.575263 0.8140391 0.6072921 0.7334029 0.6957101 0.6257305 0.621575 0.74362 0.63919 0.46851 0.671533 0.80268 0.6100779 0.66951 0.604858 0.939877 0.435253 NA 0.744602 0.863847 0.701358 0.768334 0.649605 0.730415 0.76816 0.677765 1 0.64412 0.648266 -0.00350573 5 0.646206 0.64873 -0.0025202 0.7072571 6.6911e-01 insignificant 1 1.000000 insignificant 0.857722 0.50884898 insignificant 1 1.00000 insignificant -0.05261455 0.275576 lowCoverage 1 lowCoverage 0.64384 0.65872 -0.0122913 5 0.538505 0.53242 0.0060891 6.5414e-01 7.5535e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9972e-01 0.097139 insignificant 1.0000e+00 1 insignificant -0.065337 0.4443731 lowCoverage 1.000000 lowCoverage 0.64412 0.733279 -0.0881122 5 0.646206 0.734238 -0.0880321 9.9933e-01 1.6805e-03 weaklyHypometh 1.0000e+00 0.336096 insignificant 9.9984e-01 0.00353722 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.11101742 0.02238609 lowCoverage 0.82911 lowCoverage 0.648266 0.65993 -0.0110200 5 0.648726 0.63890 0.0098272 5.4233e-01 0.641283 insignificant 1.0000e+00 1 insignificant 9.8990e-01 0.13115 insignificant 1.0000e+00 1 insignificant -0.01272236 0.87172833 lowCoverage 1.000000 lowCoverage 0.648266 0.733279 -0.0848188 5 0.64873 0.734238 -0.0855118 9.9608e-01 8.4685e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.8598e-01 0.0609815 insignificant 1.0000000 1 insignificant -0.058403 0.1079763 lowCoverage 1.00000 lowCoverage 0.65993 0.733279 -0.072553 5 0.63890 0.734238 -0.095339 0.9737350 7.4118e-02 insignificant 1 8.9298e-01 insignificant 0.374020 8.9401e-01 insignificant 1 1.000000 insignificant -0.045681 0.5620137 lowCoverage 1.00000 lowCoverage chrX 39599550 39600550 159042 ENSG00000219004 0.65955 134 7 0.3875421 93 8 0.582875 66 7 0.7730159 116 3 0.5206790 68 7 0.672560 67 3 0.5178232 103 7 0.64085 79 7 0.73958 33 3 0.94286 25 3 0.71186 269 7 0.404762 16 0 0.425468 70 4 0.666667 10 0 0.770833 27 3 NA 0 0 0.900000 16 3 0.579120 116 3 0.4627778 166 7 0.653251 95 6 0.746753 38 4 0.5000000 9 1 0.787037 37 4 0.364577 66 8 0.56444 104 4 0.604091 235 8 0.67424 43 4 0.569728 34 2 0.602718 104 7 0.5305299 133 8 0.639709 263 8 0.5263749 131 7 0.248359 95 8 0.330864 181 7 0.52166 354 6 0.622259 64 4 0.300595 102 7 0.668540 195 8 0.677024 143 4 0.659858 63 4 0.758102 178 4 0.44689 116 3 0.530754 84 3 0.69933 0.3783699 0.495074 0.7182266 0.5600575 0.570100 0.429740 0.66249 0.9568966 1.000000 0.73255 0.3678161 0.3721949 0.678727 0.648961 NA 0.700685 0.510268 0.3460065 0.5122780 0.6896552 0.4817939 0.6820572 0.352122 0.53977 0.58160 0.55486 0.497537 0.60730 0.4648478 0.59658 0.494253 0.179021 0.344243 0.5075862 0.386267 0.218391 0.593030 0.762808 0.629479 0.703065 0.66273 0.503900 0 0.55832 0.548037 -0.01296831 7 0.532955 0.61292 -0.0799668 0.8870167 2.7663e-01 insignificant 1 1.000000 insignificant 0.594139 0.65485360 insignificant 1 1.00000 insignificant 0.03969753 0.420857 lowCoverage 1 lowCoverage 0.55832 0.43895 0.1612585 7 0.532955 0.38417 0.1487831 2.7667e-04 9.9863e-01 weaklyHypermeth 4.0686e-03 1.0000e+00 weaklyHypermeth 9.1596e-04 0.999880 weaklyHypermeth 2.2341e-02 1 weaklyHypermeth 0.183502 0.0557903 lowCoverage 0.851195 lowCoverage 0.56018 0.689003 -0.2042424 3 0.603693 0.755512 -0.1518187 9.3517e-01 2.4404e-05 lowCoverage 1.0000e+00 0.012202 lowCoverage 7.5190e-01 0.01538482 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.01768848 0.79622691 lowCoverage 1.00000 lowCoverage 0.548037 0.43895 0.1663925 7 0.612921 0.38417 0.2287499 1.8880e-05 0.999508 weaklyHypermeth 3.9334e-04 1 weaklyHypermeth 2.0984e-03 0.99804 weaklyHypermeth 4.2824e-02 1 weaklyHypermeth 0.14380435 0.11463476 insignificant 1.000000 insignificant 0.548739 0.689003 -0.2241023 3 0.61615 0.755512 -0.1393603 9.6281e-01 2.6163e-06 lowCoverage 1.0000e+00 0.0026163 lowCoverage 9.1770e-01 0.0070520 lowCoverage 1.0000000 1 lowCoverage -0.022009 0.7427670 lowCoverage 1.00000 lowCoverage 0.44028 0.689003 -0.388943 3 0.48021 0.755512 -0.275298 0.9769855 2.6240e-08 lowCoverage 1 4.3734e-06 lowCoverage 0.875905 1.7268e-04 lowCoverage 1 0.017600 lowCoverage -0.165813 0.1048445 lowCoverage 1.00000 lowCoverage chrX 40054159 40055159 159084 BCOR ENSG00000183337 0.50336 79 5 0.6873316 87 9 0.754411 131 8 0.3333333 4 0 0.7314815 40 2 0.870466 66 3 0.8105006 48 6 0.79475 100 6 0.92130 33 3 0.83359 55 3 0.90137 111 6 0.893333 17 2 0.851156 70 6 0.772024 34 5 0.905820 37 3 1.000000 6 1 1.000000 1 0 0.200000 10 2 0.9864865 64 2 0.938375 59 4 0.928571 23 2 0.8489975 35 3 0.777778 26 2 0.828072 37 3 0.81757 252 6 0.831553 171 9 0.67601 56 3 0.866667 20 1 0.911896 81 6 0.7385830 120 9 0.810142 163 9 0.9264133 94 4 0.568489 99 8 0.753040 107 5 0.48614 228 9 0.737103 41 5 0.587607 30 2 0.712716 254 9 0.713777 44 2 0.273810 34 2 0.898148 19 1 0.84615 32 2 1.000000 6 0 0.91667 0.6916667 0.584034 NA 0.7453704 0.929894 0.629487 0.84196 0.8148148 0.844697 0.80247 0.6888889 0.7769424 0.818452 0.796296 1.0000000 0.962813 NA 1.0000000 0.6820728 1.0000000 0.7976190 0.9444444 0.668981 0.81640 0.57764 0.49158 0.888889 0.88472 0.7483660 0.91130 0.766813 0.813725 0.547619 0.1666667 0.340278 0.948718 0.864302 0.807692 0.777778 1.000000 0.97222 NA 0 0.81429 0.817254 0.00564151 3 0.805531 0.81339 -0.0078616 0.4880219 2.7944e-01 lowCoverage 1 1.000000 lowCoverage 0.846255 0.44737442 lowCoverage 1 1.00000 lowCoverage -0.04573310 0.392221 lowCoverage 1 lowCoverage 0.81429 0.65744 0.1542071 3 0.805531 0.61860 0.1869326 4.2748e-05 9.2903e-01 lowCoverage 7.4996e-04 1.0000e+00 lowCoverage 2.7436e-02 0.999701 lowCoverage 3.3429e-01 1 lowCoverage 0.143605 0.0415674 lowCoverage 0.710410 lowCoverage 0.81429 0.733333 0.0992136 2 0.805531 0.693279 0.1122517 1.0408e-02 9.6649e-01 lowCoverage 2.9738e-01 1.000000 lowCoverage 6.4116e-01 0.80538214 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.03807660 0.78961399 lowCoverage 1.00000 lowCoverage 0.817254 0.65744 0.1514654 8 0.813393 0.61860 0.1947943 7.5574e-05 0.983708 weaklyHypermeth 1.2809e-03 1 weaklyHypermeth 1.1338e-03 0.99980 weaklyHypermeth 2.9072e-02 1 weaklyHypermeth 0.18933848 0.00564720 lowCoverage 0.171127 lowCoverage 0.817254 0.733333 0.0670129 2 0.81339 0.693279 0.1201134 1.0001e-02 9.4314e-01 lowCoverage 2.6318e-01 1.0000000 lowCoverage 4.3490e-01 0.7974660 lowCoverage 1.0000000 1 lowCoverage 0.083810 0.5485051 lowCoverage 1.00000 lowCoverage 0.65744 0.733333 -0.105425 2 0.61860 0.693279 -0.074681 0.8750138 3.7978e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.999081 1.9921e-01 lowCoverage 1 1.000000 lowCoverage -0.105529 0.4679157 lowCoverage 1.00000 lowCoverage chrX 40193612 40194612 159093 ENSG00000214045 0.81735 252 7 0.8142123 100 7 0.737821 178 7 0.8753229 103 7 0.7473354 128 7 0.777110 189 7 0.7254081 115 7 0.82730 217 7 0.80223 141 7 0.77754 124 7 0.87062 222 7 0.805556 19 2 0.786848 222 7 0.907273 50 5 0.781937 98 7 0.555711 38 3 0.377778 48 2 0.776468 150 7 0.7949811 184 7 0.854297 292 7 0.673923 51 6 0.5101620 111 7 0.830159 82 7 0.749784 85 7 0.77532 53 5 0.732183 283 7 0.77004 135 7 0.749773 67 6 0.770408 169 7 0.7571537 152 7 0.774617 259 7 0.9100649 356 7 0.594508 119 7 0.616050 94 7 0.31329 324 7 0.690476 23 1 0.590849 91 7 0.483543 245 7 0.699232 230 7 0.729365 115 7 0.732797 152 7 0.78651 152 7 0.720238 76 5 0.84609 0.8340629 0.746710 0.8912664 0.7633520 0.777096 0.694909 0.81644 0.8385685 0.761489 0.87068 0.8078903 0.7719552 0.842289 0.783264 0.6640959 0.484459 0.816011 0.8228181 0.8571663 0.6158730 0.4897064 0.8064103 0.737814 0.75194 0.71718 0.77763 0.755291 0.77176 0.7317814 0.78674 0.909812 0.630056 0.591886 0.3803759 0.767094 0.602340 0.451306 0.743273 0.764696 0.763307 0.80635 0.737633 4 0.78955 0.757626 0.03138462 7 0.803514 0.77301 0.0305076 0.0618038 9.3302e-01 insignificant 1 1.000000 insignificant 0.083392 0.87002056 insignificant 1 1.00000 insignificant 0.02035493 0.594601 insignificant 1 insignificant 0.78955 0.45089 0.2835532 7 0.803514 0.53088 0.2726358 5.6937e-17 1.0000e+00 hypermethylated 4.3797e-15 1.0000e+00 hypermethylated 7.6943e-06 0.999983 hypermethylated 5.3352e-04 1 hypermethylated 0.222536 0.0068079 weaklyHypermeth 0.195567 insignificant 0.78955 0.633103 0.1044868 7 0.803514 0.729499 0.0740148 6.0353e-05 3.3730e-01 weaklyHypermeth 3.3529e-03 1.000000 weaklyHypermeth 2.9222e-02 0.14879639 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.03702658 0.22909386 insignificant 1.00000 insignificant 0.757626 0.45089 0.2656974 7 0.773006 0.53088 0.2421282 3.4754e-09 0.999997 hypermethylated 1.9308e-07 1 hypermethylated 2.7918e-05 0.99645 hypermethylated 1.8612e-03 1 hypermethylated 0.20218075 0.01109159 weaklyHypermeth 0.292708 insignificant 0.757626 0.633103 0.0862325 7 0.77301 0.729499 0.0435072 3.5946e-03 3.8283e-02 weaklyHypermeth 1.3825e-01 1.0000000 insignificant 2.2851e-02 0.0036014 weaklyHypermeth 0.8788883 1 insignificant 0.016672 0.5965485 insignificant 1.00000 insignificant 0.45089 0.633103 -0.157146 7 0.53088 0.729499 -0.198621 0.9969631 1.4876e-04 weaklyHypometh 1 7.0840e-03 weaklyHypometh 0.998458 2.5594e-03 weaklyHypometh 1 0.134704 insignificant -0.185509 0.0175575 weaklyHypometh 0.51889 insignificant chrX 40218149 40219149 159097 ENSG00000214045 0.30877 79 5 0.0451613 134 5 0.076923 170 5 0.0000000 94 4 0.0055556 162 5 0.042431 277 5 0.0139535 382 5 0.26326 146 5 0.02000 129 5 0.11215 111 5 0.12121 282 5 0.050000 37 4 0.006250 130 4 0.000000 61 4 0.000000 86 5 0.000000 33 4 NA 0 0 0.000000 84 5 0.0025974 324 5 0.010145 394 5 0.016667 46 4 0.0000000 36 4 0.022222 113 5 0.086515 111 5 0.19302 37 4 0.281704 337 5 0.30597 107 5 0.157652 57 4 0.360719 225 5 0.0100000 253 5 0.132847 344 5 0.0123700 417 5 0.125758 94 4 0.264295 190 5 0.00000 55 4 0.000000 2 0 0.063276 75 5 0.118093 315 5 0.062285 145 5 0.028182 100 5 0.164286 34 5 0.11161 62 4 0.000000 68 5 0.27943 0.0616634 0.098552 0.0000000 0.0020786 0.041521 0.021041 0.20312 0.0034014 0.083668 0.14184 0.0697279 0.0095663 0.000000 0.000000 0.0000000 NA 0.000000 0.0039756 0.0047778 0.0034014 0.0000000 0.0037793 0.070238 0.13819 0.31546 0.22185 0.178046 0.39465 0.0017007 0.16051 0.013265 0.158679 0.238395 0.0049887 NA 0.096480 0.083433 0.038248 0.018398 0.244655 0.11879 0.000000 3 0.04687 0.139076 -0.09183218 5 0.049985 0.13676 -0.0867758 0.9999982 2.7481e-05 weaklyHypometh 1 0.027481 weaklyHypometh 0.999971 0.00087618 weaklyHypometh 1 0.51150 insignificant -0.07488116 0.095669 lowCoverage 1 lowCoverage 0.04687 0.13151 -0.0843174 5 0.049985 0.14371 -0.0937249 9.9196e-01 4.2282e-05 weaklyHypometh 1.0000e+00 8.4564e-03 weaklyHypometh 9.8658e-01 0.043415 weaklyHypometh 1.0000e+00 1 insignificant -0.038478 0.4219854 lowCoverage 1.000000 lowCoverage 0.04687 0.056235 -0.0085550 5 0.049985 0.060012 -0.0100276 8.5635e-01 5.5065e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4545e-01 0.27293454 insignificant 1.0000e+00 1.00000 insignificant -0.01651340 0.65662006 lowCoverage 1.00000 lowCoverage 0.138742 0.13133 0.0071513 5 0.113967 0.11976 -0.0057909 7.4974e-01 0.551933 insignificant 1.0000e+00 1 insignificant 6.4477e-01 0.92019 insignificant 1.0000e+00 1 insignificant 0.03640269 0.52003065 lowCoverage 1.000000 lowCoverage 0.139076 0.056235 0.0819032 5 0.13676 0.060012 0.0767482 3.7669e-02 9.9798e-01 weaklyHypermeth 8.3710e-01 1.0000000 insignificant 2.0254e-01 0.9726479 insignificant 1.0000000 1 insignificant 0.058368 0.2390730 lowCoverage 1.00000 lowCoverage 0.13151 0.056235 0.077275 5 0.14371 0.060012 0.083697 0.0241812 9.8347e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.500417 9.1377e-01 insignificant 1 1.000000 insignificant 0.021965 0.6714318 lowCoverage 1.00000 lowCoverage chrX 41842616 41843616 159178 ENSG00000218164 0.82312 296 6 0.8507937 50 6 0.000000 22 2 0.8072612 98 6 0.6944444 42 6 0.747913 192 6 0.8816993 94 6 0.76295 154 6 0.70863 102 6 0.73611 57 6 0.87845 66 6 0.808333 42 6 0.660056 214 6 0.750000 4 0 NA 0 0 NA 0 0 0.411111 39 6 1.000000 1 0 0.7407407 46 6 NA 0 0 0.750000 3 0 NA 0 0 1.000000 1 0 0.768353 56 6 0.81746 52 6 0.883860 225 6 NA 0 0 0.500000 2 0 1.000000 1 0 0.8089494 90 6 0.661132 163 6 0.8214631 231 6 NA 0 0 0.363889 46 5 0.00000 1 0 NA 0 0 0.508201 34 4 0.622512 201 6 0.611705 329 6 0.567857 92 6 NA 0 0 0.80499 128 6 NA 0 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.74720 0.803398 -0.05541698 6 0.747873 0.80283 -0.0549589 0.9851990 1.0430e-01 insignificant 1 1.000000 insignificant 0.977532 0.06625644 insignificant 1 1.00000 insignificant -0.07985075 0.276799 lowCoverage 1 lowCoverage 0.74720 0.57092 0.1776129 6 0.747873 0.57708 0.1707889 1.2565e-05 9.8793e-01 weaklyHypermeth 2.3707e-04 1.0000e+00 weaklyHypermeth 2.8265e-03 0.999796 weaklyHypermeth 5.2342e-02 1 weaklyHypermeth 0.347621 0.0752958 lowCoverage 1.000000 lowCoverage 0.74720 0.653916 0.0968176 6 0.747873 0.648320 0.0995530 3.8685e-02 9.9735e-01 weaklyHypermeth 8.4098e-01 1.000000 insignificant 7.3463e-02 0.99898385 insignificant 1.0000e+00 1.00000 insignificant 0.05975497 0.54139106 lowCoverage 1.00000 lowCoverage 0.803398 0.57092 0.2350309 6 0.802831 0.57708 0.2257478 2.5820e-07 0.998212 hypermethylated 9.5630e-06 1 hypermethylated 1.7142e-04 1.00000 hypermethylated 5.7139e-03 1 hypermethylated 0.42747136 0.04399905 lowCoverage 0.698398 lowCoverage 0.803398 0.653916 0.1554679 6 0.80283 0.648320 0.1545119 4.2860e-04 9.9999e-01 weaklyHypermeth 2.2219e-02 1.0000000 weaklyHypermeth 9.0592e-03 0.9998895 weaklyHypermeth 0.4117802 1 insignificant 0.139606 0.1852284 lowCoverage 1.00000 lowCoverage 0.57092 0.653916 -0.075120 6 0.57708 0.648320 -0.071236 0.8148782 2.5837e-02 weaklyHypometh 1 4.1011e-01 insignificant 0.998955 1.2357e-01 insignificant 1 1.000000 insignificant -0.287866 0.1273472 lowCoverage 1.00000 lowCoverage chrX 43713516 43714516 159331 MAOB ENSG00000069535 0.79660 308 10 0.7242238 195 11 0.667891 357 11 0.6080209 123 9 0.7279914 179 11 0.804103 230 9 0.7753169 273 11 0.81842 310 11 0.69062 314 11 0.83619 258 11 0.77975 478 11 0.729617 126 11 0.603934 353 11 0.796280 65 8 0.768609 152 11 0.712754 62 6 0.484048 137 9 0.755355 185 8 0.7662207 331 11 0.774497 397 11 0.723396 76 7 0.5371961 131 9 0.678505 137 11 0.608321 145 10 0.85748 93 9 0.862395 393 11 0.76653 252 11 0.829013 181 11 0.763762 365 11 0.8090116 225 11 0.735639 425 11 0.8236074 422 11 0.723483 154 10 0.621190 329 9 0.68150 384 11 0.232540 68 6 0.927412 116 10 0.136166 623 11 0.553127 407 9 0.524479 165 8 0.657797 230 9 0.70551 233 9 0.634565 137 8 0.76813 0.6422973 0.739256 0.6315061 0.7572734 0.755873 0.748885 0.80839 0.6769664 0.835318 0.85874 0.6685725 0.5087789 0.697813 0.784240 0.7489501 0.559949 0.688403 0.7330576 0.7672913 0.7651081 0.4388151 0.6807310 0.703666 0.80278 0.82466 0.72253 0.841250 0.78354 0.7722563 0.74625 0.786919 0.673168 0.476413 0.5757674 0.358030 0.875119 0.100598 0.554346 0.467546 0.666372 0.73084 0.518517 7 0.74922 0.785865 -0.03296801 11 0.702555 0.72943 -0.0268773 0.9898746 5.4914e-02 insignificant 1 1.000000 insignificant 0.947078 0.15130337 insignificant 1 1.00000 insignificant -0.01854960 0.599825 insignificant 1 insignificant 0.74948 0.46714 0.3053999 11 0.733324 0.41367 0.3196560 5.1235e-21 1.0000e+00 hypermethylated 6.4044e-19 1.0000e+00 hypermethylated 8.3047e-03 0.999733 weaklyHypermeth 1.3718e-01 1 insignificant 0.177307 0.2165148 insignificant 1.000000 insignificant 0.74948 0.565700 0.1401228 9 0.733324 0.583135 0.1501888 9.6165e-08 9.9997e-01 weaklyHypermeth 6.8689e-06 1.000000 weaklyHypermeth 8.2155e-04 0.99752520 weaklyHypermeth 5.1347e-02 1.00000 weaklyHypermeth 0.11592652 0.02017703 weaklyHypermeth 0.77604 insignificant 0.786695 0.46714 0.3478676 11 0.790219 0.41367 0.3765508 2.3281e-17 1.000000 hypermethylated 4.6561e-15 1 hypermethylated 3.5107e-03 0.99941 weaklyHypermeth 6.8836e-02 1 weaklyHypermeth 0.19585666 0.18104329 insignificant 1.000000 insignificant 0.786695 0.565700 0.1622835 9 0.79022 0.583135 0.2070836 5.4400e-10 1.0000e+00 weaklyHypermeth 1.8133e-07 1.0000000 weaklyHypermeth 1.0045e-04 0.9999625 weaklyHypermeth 0.0143494 1 weaklyHypermeth 0.134476 0.0123380 weaklyHypermeth 0.85237 insignificant 0.46714 0.565700 -0.232025 9 0.41367 0.583135 -0.169467 0.9999172 4.6224e-03 weaklyHypometh 1 1.1006e-01 insignificant 0.987325 7.4767e-01 insignificant 1 1.000000 insignificant -0.061381 0.6522639 insignificant 1.00000 insignificant chrX 43713751 43714751 159332 MAOB ENSG00000069535 0.74332 208 5 0.6800000 60 5 0.727655 153 5 0.6093126 86 5 0.7822222 65 5 0.682172 132 5 0.7579819 97 5 0.74725 126 5 0.71648 129 5 0.81224 128 5 0.87435 159 5 0.721082 65 5 0.494602 165 5 0.747321 32 4 0.780614 75 5 0.923636 29 2 0.471429 64 5 0.640197 144 5 0.6774233 108 5 0.700369 200 5 0.604762 26 1 0.4332158 93 5 0.708413 61 5 0.601515 48 4 0.71352 60 5 0.785051 118 5 0.69332 100 5 0.838870 106 5 0.705356 113 5 0.6971126 85 5 0.713339 120 5 0.8024056 228 5 0.643939 46 4 0.519312 91 3 0.61737 79 5 0.103333 56 5 0.913333 48 4 0.030000 163 5 0.437572 251 5 0.464858 94 3 0.536043 170 5 0.69632 151 5 0.502581 86 3 0.70498 0.5920000 0.754438 0.5920706 0.7323333 0.660583 0.741396 0.75742 0.6820071 0.789495 0.88283 0.6614610 0.3875915 0.584021 0.711191 0.8743636 0.482857 0.585658 0.6642151 0.6866776 0.6813095 0.3332030 0.6438810 0.591364 0.70739 0.76779 0.64331 0.836772 0.76503 0.6751371 0.67959 0.774529 0.561455 0.303294 0.5200000 0.173500 0.819500 0.015750 0.442615 0.357727 0.521710 0.67873 0.336803 3 0.68764 0.708981 -0.02169102 5 0.707960 0.72489 -0.0169339 0.8506783 4.8000e-01 insignificant 1 1.000000 insignificant 0.424575 0.78754735 insignificant 1 1.00000 insignificant 0.02307615 0.562114 lowCoverage 1 lowCoverage 0.68764 0.28571 0.3925895 5 0.707960 0.34302 0.3649424 8.4663e-13 1.0000e+00 hypermethylated 4.2331e-11 1.0000e+00 hypermethylated 5.5729e-03 0.979228 weaklyHypermeth 9.6084e-02 1 weaklyHypermeth 0.243269 0.1416902 lowCoverage 1.000000 lowCoverage 0.68764 0.461436 0.2067849 5 0.707960 0.512822 0.1951381 1.5691e-07 1.0000e+00 hypermethylated 9.2302e-06 1.000000 hypermethylated 9.4082e-05 0.99980751 hypermethylated 9.0947e-03 1.00000 hypermethylated 0.18700774 0.00952582 lowCoverage 0.60904 lowCoverage 0.708981 0.28571 0.4152950 5 0.724894 0.34302 0.3818763 4.3662e-09 1.000000 hypermethylated 2.2980e-07 1 hypermethylated 2.2693e-02 0.90131 weaklyHypermeth 2.7674e-01 1 insignificant 0.22019249 0.17722327 lowCoverage 1.000000 lowCoverage 0.708981 0.461436 0.2289038 5 0.72489 0.512822 0.2120720 3.9455e-06 1.0000e+00 hypermethylated 3.4382e-04 1.0000000 hypermethylated 1.6783e-03 0.9976594 weaklyHypermeth 0.1118899 1 insignificant 0.163932 0.0176006 lowCoverage 1.00000 lowCoverage 0.28571 0.461436 -0.195542 5 0.34302 0.512822 -0.169804 0.9811830 4.2276e-02 weaklyHypometh 1 5.7130e-01 insignificant 0.854462 5.4935e-01 insignificant 1 1.000000 insignificant -0.056261 0.7134654 lowCoverage 1.00000 lowCoverage chrX 44054453 44055453 159387 ENSG00000214018 0.96568 263 5 0.9086538 72 5 0.765714 84 5 0.9593632 75 5 0.7064935 91 8 0.677084 123 5 0.8178363 101 5 0.80432 97 7 0.81341 83 5 0.65162 107 9 0.85457 135 8 0.307692 76 5 0.731829 146 7 1.000000 18 2 0.866434 62 5 0.943452 67 8 0.355515 76 5 0.981250 112 8 0.6685859 140 8 0.635086 204 8 0.378788 26 0 0.9714286 53 5 0.974603 67 5 0.652778 46 5 0.79921 57 5 0.940661 114 8 0.72898 131 8 0.288542 62 5 0.950471 76 9 0.6831502 85 8 0.794293 170 8 0.7568042 205 5 0.708225 44 3 0.338648 174 8 0.50000 72 3 0.275772 83 5 0.443485 59 6 0.601005 152 11 0.875091 306 8 0.881706 168 8 0.866278 240 5 0.76852 223 5 0.938243 149 5 0.92251 0.9610636 0.819735 0.9341805 0.9297419 0.885893 0.941412 0.90571 0.8752194 0.923948 0.91557 0.7982804 0.9582674 NA 0.929163 0.9074074 0.651551 0.983128 0.9260288 0.9175184 0.8055556 0.9638448 0.9705075 1.000000 0.88928 0.90034 0.83214 0.826132 0.89997 0.8534685 0.94547 0.902180 0.952263 0.230051 0.6414880 0.584897 0.779854 0.326400 0.943877 0.932491 0.951113 0.92424 0.962828 5 0.88163 0.862637 0.01459198 5 0.672387 0.62487 0.0475210 0.3256149 9.1396e-01 insignificant 1 1.000000 insignificant 0.373732 0.90690786 insignificant 1 1.00000 insignificant 0.02742121 0.725453 insignificant 1 insignificant 0.89027 0.44178 0.4374862 5 0.846080 0.46552 0.3805600 3.6347e-33 9.9999e-01 hypermethylated 1.2116e-30 1.0000e+00 hypermethylated 2.0440e-06 0.999990 hypermethylated 1.8582e-04 1 hypermethylated 0.292874 0.0041578 weaklyHypermeth 0.134122 insignificant 0.88841 0.932781 -0.0324623 5 0.819459 0.839099 -0.0196401 7.2152e-01 1.3345e-01 insignificant 1.0000e+00 1.000000 insignificant 7.3661e-01 0.10447151 insignificant 1.0000e+00 1.00000 insignificant -0.09523859 0.07354033 insignificant 1.00000 insignificant 0.871508 0.44178 0.4275042 7 0.811307 0.46552 0.3457864 5.2538e-18 0.999675 hypermethylated 1.3134e-15 1 hypermethylated 7.9630e-05 0.99986 hypermethylated 3.1852e-03 1 hypermethylated 0.26545271 0.01237133 weaklyHypermeth 0.299009 insignificant 0.868640 0.932781 -0.0436917 5 0.78187 0.839099 -0.0572333 9.8541e-01 4.7161e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9650e-01 0.1278828 insignificant 1.0000000 1 insignificant -0.122660 0.1008629 insignificant 1.00000 insignificant 0.44178 0.933641 -0.470310 5 0.46552 0.909024 -0.443503 1.0000000 2.1389e-12 hypomethylated 1 1.6065e-09 hypomethylated 1.000000 6.2275e-05 hypomethylated 1 0.010379 hypomethylated -0.388113 0.0011535 weaklyHypometh 0.18480 insignificant chrX 44222021 44223021 159400 ENSG00000220833 0.76022 149 6 0.6819892 122 6 0.648108 90 6 0.7584184 101 6 0.6564815 49 4 0.731260 306 6 0.7310895 83 6 0.63231 89 6 0.69321 73 3 0.76984 58 6 0.69461 206 6 0.583155 39 3 0.734031 89 6 0.750000 22 3 0.818182 82 6 0.686508 29 3 0.586462 33 3 0.683644 127 6 0.6546919 95 6 0.719924 223 6 0.542857 37 3 0.6703704 70 6 0.782937 74 6 0.664773 54 3 0.60741 67 6 0.666135 181 6 0.52135 75 6 0.548718 53 6 0.723719 92 6 0.5292013 179 6 0.695732 149 6 0.6958087 233 6 0.716567 121 6 0.664275 84 6 0.66534 126 6 0.650000 22 1 0.497199 64 7 0.683034 151 6 0.734235 123 6 0.787262 148 6 0.735655 179 6 0.67500 101 6 0.752914 179 6 0.79292 0.7055382 0.680612 0.8099656 0.7043876 0.769648 0.755518 0.66472 0.7391625 0.789232 0.72999 0.6692951 0.7678508 0.794773 0.845386 0.7149621 0.673241 0.754215 0.6713040 0.7421389 0.6920455 0.6887626 0.8266369 0.844267 0.76684 0.68488 0.65863 0.744930 0.71545 0.7528099 0.69195 0.751184 0.749435 0.620932 0.7262807 0.685511 0.726270 0.722261 0.775607 0.811303 0.768317 0.72530 0.804768 3 0.74286 0.722310 0.01427596 6 0.656784 0.56115 0.0956364 0.2735384 9.6340e-01 insignificant 1 1.000000 insignificant 0.419119 0.89742336 insignificant 1 1.00000 insignificant 0.06129015 0.044004 weaklyHypermeth 1 insignificant 0.74286 0.70599 0.0315769 6 0.656784 0.54579 0.1109964 9.4158e-02 9.9885e-01 insignificant 8.0477e-01 1.0000e+00 insignificant 2.0942e-01 0.996203 insignificant 1.0000e+00 1 insignificant 0.052637 0.1659313 insignificant 1.000000 insignificant 0.74297 0.794521 -0.0374936 6 0.709045 0.742103 -0.0330582 9.7625e-01 7.3903e-02 insignificant 1.0000e+00 1.000000 insignificant 9.4443e-01 0.15172927 insignificant 1.0000e+00 1.00000 insignificant -0.03830636 0.12589518 insignificant 1.00000 insignificant 0.722310 0.70599 0.0170312 6 0.561147 0.54579 0.0153599 3.0677e-01 0.931747 insignificant 1.0000e+00 1 insignificant 3.3545e-01 0.82654 insignificant 1.0000e+00 1 insignificant -0.00865296 0.83195671 insignificant 1.000000 insignificant 0.728800 0.794521 -0.0503629 6 0.70058 0.742103 -0.0415259 9.9168e-01 6.3927e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.4446e-01 0.2153780 insignificant 1.0000000 1 insignificant -0.099597 0.0057182 weaklyHypometh 0.65838 insignificant 0.71123 0.794521 -0.067556 6 0.67216 0.742103 -0.069942 0.9986964 6.5412e-03 weaklyHypometh 1 1.3802e-01 insignificant 0.979870 1.0435e-02 weaklyHypometh 1 0.386478 insignificant -0.090944 0.0365182 weaklyHypometh 0.79357 insignificant chrX 44606606 44607606 159426 DUSP21 ENSG00000189037 0.65152 25 1 0.6845238 53 5 0.345455 26 1 0.9818182 26 1 0.6722222 37 5 0.815990 65 5 0.5858974 24 1 0.76105 56 5 0.65833 41 5 0.64722 34 5 0.74121 103 5 0.950000 8 0 0.744312 57 5 0.620000 13 1 0.700000 27 3 0.600000 5 0 0.416667 9 0 0.584000 31 1 0.8154762 57 5 0.775773 58 5 0.800000 19 1 0.5291667 23 3 0.571429 42 5 0.402778 31 3 0.88889 10 0 0.893333 78 5 0.62607 21 1 0.628571 25 3 0.751429 40 3 0.9129412 36 4 0.717778 58 5 0.8095602 102 5 0.749412 33 3 0.904444 30 5 0.65098 71 5 0.666667 4 0 0.669804 34 3 0.835714 59 5 0.169231 33 1 0.789048 46 3 0.800000 26 1 0.40000 15 1 0.623333 33 2 0.76519 0.7425958 0.494457 0.9534368 0.7134146 0.805642 0.687461 0.82428 0.7136179 0.785772 0.80672 0.8719512 0.8140741 0.612195 0.817073 0.7560976 0.641081 0.715122 0.8689024 0.7954077 0.8780488 0.6942509 0.7386760 0.684959 0.86780 0.86063 0.69637 0.616725 0.79268 0.8550933 0.76287 0.822261 0.709469 0.898374 0.7110351 0.814605 0.752750 0.830139 0.433396 0.843496 0.878049 0.63415 0.750813 0 0.75894 0.775258 -0.01844571 5 0.599029 0.73508 -0.1360564 0.8582547 3.0735e-01 insignificant 1 1.000000 insignificant 0.826837 0.51359372 insignificant 1 1.00000 insignificant -0.02342201 0.688143 lowCoverage 1 lowCoverage 0.75995 0.77922 -0.0109371 3 0.718834 0.76098 -0.0421461 5.1214e-01 2.8344e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4977e-01 0.390020 lowCoverage 1.0000e+00 1 lowCoverage -0.058596 0.3022112 lowCoverage 1.000000 lowCoverage 0.75995 0.816993 0.0010691 1 0.718834 0.650675 0.0681592 1.8378e-01 5.4069e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.2927e-01 0.35691221 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.13125088 0.34712684 lowCoverage 1.00000 lowCoverage 0.775934 0.77922 0.0079388 3 0.748769 0.76098 -0.0122118 5.1251e-01 0.572919 lowCoverage 1.0000e+00 1 lowCoverage 7.7356e-01 0.39533 lowCoverage 1.0000e+00 1 lowCoverage -0.03517422 0.58561158 lowCoverage 1.000000 lowCoverage 0.775934 0.816993 0.0095501 1 0.74877 0.650675 0.0980935 1.9753e-01 5.1359e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.3406e-01 0.5669374 lowCoverage 1.0000000 1 lowCoverage 0.154673 0.2838290 lowCoverage 1.00000 lowCoverage 0.77922 0.816993 -0.028765 1 0.76098 0.650675 0.110305 0.2233206 2.9911e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.153500 5.6936e-01 lowCoverage 1 1.000000 lowCoverage 0.189847 0.1987151 lowCoverage 1.00000 lowCoverage chrX 46819622 46820622 159525 PHF16 ENSG00000102221 0.60835 127 5 0.5421242 47 5 0.518135 66 5 0.6698529 86 5 0.7076146 66 5 0.610040 240 5 0.6805334 120 5 0.56464 98 5 0.62250 82 5 0.63111 60 5 0.64220 144 5 0.587879 30 2 0.686414 83 5 0.604762 32 5 0.576923 80 5 0.591126 65 5 0.767857 80 5 0.731032 94 5 0.6584416 57 5 0.687539 154 5 0.663333 19 1 0.6678755 60 5 0.607500 63 5 0.688889 40 5 0.61399 36 5 0.594444 90 5 0.85417 12 0 0.883333 23 2 0.616323 75 5 0.5223224 90 5 0.635528 99 5 0.6759623 251 5 0.432143 33 5 0.539461 77 5 0.42190 79 5 0.621429 16 1 0.452273 61 5 0.539735 106 5 0.621135 122 5 0.632540 101 5 0.603929 107 5 0.57100 90 5 0.649778 137 5 0.62226 0.5702307 0.527783 0.6860994 0.7056014 0.624269 0.675552 0.56775 0.6264098 0.657393 0.64071 0.6154021 0.7024113 0.624239 0.569404 0.5952544 0.757116 0.729592 0.6722488 0.6873667 0.6654135 0.6702374 0.6221805 0.709273 0.64318 0.61873 0.88123 0.897870 0.63168 0.5572187 0.65683 0.671222 0.469209 0.545289 0.4431794 0.633190 0.469107 0.561960 0.648918 0.639814 0.629901 0.59690 0.657397 2 0.61789 0.653846 -0.01650043 5 0.636733 0.64990 -0.0131652 0.7449861 2.2008e-01 insignificant 1 1.000000 insignificant 0.764051 0.10894520 insignificant 1 1.00000 insignificant -0.03418527 0.318791 lowCoverage 1 lowCoverage 0.61789 0.50269 0.1395751 5 0.636733 0.50021 0.1365200 4.3006e-08 9.9734e-01 weaklyHypermeth 1.2287e-06 1.0000e+00 weaklyHypermeth 9.3042e-06 0.999196 weaklyHypermeth 5.4730e-04 1 weaklyHypermeth 0.133296 0.0065392 lowCoverage 0.195567 lowCoverage 0.61789 0.608618 -0.0038853 5 0.636733 0.623613 0.0131198 1.9674e-01 7.5955e-02 insignificant 1.0000e+00 1.000000 insignificant 1.4265e-01 0.11873616 insignificant 1.0000e+00 1.00000 insignificant 0.01877792 0.35578415 lowCoverage 1.00000 lowCoverage 0.653846 0.50269 0.1517621 5 0.649898 0.50021 0.1496852 2.9024e-06 0.999976 weaklyHypermeth 6.9105e-05 1 weaklyHypermeth 3.1564e-05 1.00000 weaklyHypermeth 1.9728e-03 1 weaklyHypermeth 0.16748174 0.00213310 lowCoverage 0.079004 lowCoverage 0.653846 0.608618 0.0207412 5 0.64990 0.623613 0.0262850 2.1967e-01 7.5596e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.8098e-01 0.8849376 insignificant 1.0000000 1 insignificant 0.052963 0.1286114 lowCoverage 1.00000 lowCoverage 0.50269 0.608618 -0.124186 5 0.50021 0.623613 -0.123400 0.9999755 4.9999e-04 weaklyHypometh 1 2.0833e-02 weaklyHypometh 0.999888 2.6991e-03 weaklyHypometh 1 0.134957 insignificant -0.114519 0.0142391 lowCoverage 0.51889 lowCoverage chrX 48216762 48217762 159558 SLC38A5 ENSG00000017483 0.53189 297 5 0.3223510 67 5 0.553955 145 5 0.3381504 153 5 0.6432872 71 5 0.581764 144 5 0.5589191 186 5 0.41392 102 5 0.61750 167 5 0.47112 145 5 0.61292 169 5 0.523485 68 5 0.439861 149 5 NA 0 0 0.192051 83 5 0.282540 35 3 0.556746 120 5 0.404910 193 5 0.1755037 85 5 0.453528 247 5 0.575238 69 4 0.3013234 147 5 0.622143 114 5 0.564490 74 5 0.51664 123 5 0.463370 224 5 0.47847 147 5 0.646905 57 5 0.578943 114 5 0.3247812 121 5 0.369595 187 5 0.5097337 313 5 0.427672 90 5 0.450228 141 5 0.35970 150 5 0.166573 76 5 0.512063 42 4 0.378094 197 5 0.449791 371 5 0.391711 184 5 0.491735 262 5 0.55290 306 5 0.430450 227 5 0.54328 0.3710466 0.556646 0.3574783 0.6209755 0.560308 0.556525 0.45733 0.6182931 0.479288 0.63516 0.5175997 0.4558694 NA 0.172917 0.3298876 0.592308 0.449420 0.1376942 0.4449432 0.5126504 0.3236905 0.6528470 0.556540 0.52956 0.46101 0.51448 0.625669 0.58450 0.3260166 0.38279 0.511345 0.477969 0.441696 0.4034006 0.210266 0.619516 0.418676 0.489516 0.412927 0.502470 0.59208 0.445351 5 0.49315 0.489349 -0.00086478 5 0.481641 0.47602 0.0056180 0.2638860 3.2594e-01 insignificant 1 1.000000 insignificant 0.533991 0.15712737 insignificant 1 1.00000 insignificant -0.03942163 0.399214 lowCoverage 1 lowCoverage 0.49315 0.40948 0.0762953 5 0.481641 0.39150 0.0901430 3.1204e-02 9.8973e-01 weaklyHypermeth 2.9438e-01 1.0000e+00 insignificant 1.2275e-01 0.970005 insignificant 1.0000e+00 1 insignificant 0.074158 0.2323790 lowCoverage 1.000000 lowCoverage 0.49315 0.500000 -0.0063818 5 0.481641 0.469920 0.0117215 3.9091e-01 5.4881e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1750e-01 0.54827717 insignificant 1.0000e+00 1.00000 insignificant -0.00676979 0.87543860 lowCoverage 1.00000 lowCoverage 0.489349 0.40948 0.0698162 5 0.476023 0.39150 0.0845250 6.8082e-02 0.970159 insignificant 6.3998e-01 1 insignificant 4.9763e-02 0.98037 weaklyHypermeth 5.2382e-01 1 insignificant 0.11357974 0.08196066 lowCoverage 1.000000 lowCoverage 0.489349 0.500000 -0.0063920 5 0.47602 0.469920 0.0061034 2.4450e-01 1.6802e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.3425e-02 0.2768025 insignificant 1.0000000 1 insignificant 0.032652 0.4590119 lowCoverage 1.00000 lowCoverage 0.40948 0.500000 -0.073853 5 0.39150 0.469920 -0.078422 0.9305255 1.2350e-01 insignificant 1 1.0000e+00 insignificant 0.964055 7.3824e-02 insignificant 1 1.000000 insignificant -0.080928 0.1862336 lowCoverage 1.00000 lowCoverage chrX 48783930 48784930 159572 GRIPAP1 ENSG00000068400 0.23117 114 5 0.0095238 193 5 0.172187 266 5 0.0000000 58 2 0.2867212 189 5 0.100000 157 5 0.0153788 377 5 0.20956 178 5 0.17800 264 5 0.26718 250 5 0.31008 242 5 0.010526 142 5 0.326034 217 5 0.015625 64 2 0.014219 217 5 0.015873 196 5 0.092473 70 3 0.084762 110 5 0.0240476 331 5 0.297757 174 5 0.069444 87 5 0.0628571 62 2 0.101864 93 5 0.139057 101 5 0.35143 61 2 0.257492 237 5 0.28814 264 5 0.225433 65 5 0.254113 207 5 0.0240000 185 5 0.237950 280 5 0.0294118 256 5 0.000000 134 5 0.450109 106 5 0.13984 413 5 0.200000 26 4 0.113563 72 3 0.218612 224 5 0.342054 153 5 0.066667 81 5 0.428922 89 4 0.40079 145 5 0.080000 50 3 0.29666 0.0036364 0.246230 0.0030847 0.3327974 0.038182 0.011148 0.26438 0.2559229 0.254744 0.30028 0.0040191 0.4023668 0.039285 0.014473 0.0072727 0.092248 0.040762 0.0087273 0.3246229 0.0318182 0.1286234 0.0633357 0.120763 0.39086 0.31106 0.25400 0.264680 0.25920 0.0091636 0.26978 0.011230 0.000000 0.379565 0.2544004 0.357576 0.066278 0.295310 0.371581 0.025455 0.434670 0.46328 0.030545 2 0.15175 0.183351 -0.03274960 5 0.145128 0.14751 -0.0023800 0.8292677 3.5481e-01 insignificant 1 1.000000 insignificant 0.840966 0.55499296 insignificant 1 1.00000 insignificant -0.03704320 0.387130 lowCoverage 1 lowCoverage 0.15175 0.20308 -0.0513401 5 0.145128 0.19789 -0.0527582 6.6927e-01 2.2935e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3166e-01 0.147308 insignificant 1.0000e+00 1 insignificant -0.053965 0.4471233 lowCoverage 1.000000 lowCoverage 0.15182 0.324324 -0.1704011 5 0.147487 0.308087 -0.1606001 9.9457e-01 1.4646e-05 weaklyHypometh 1.0000e+00 0.012202 weaklyHypometh 9.6753e-01 0.00941749 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.13062985 0.17868532 lowCoverage 1.00000 lowCoverage 0.183351 0.20308 -0.0214341 5 0.147508 0.19789 -0.0503782 5.3225e-01 0.512534 insignificant 1.0000e+00 1 insignificant 6.6808e-01 0.41939 insignificant 1.0000e+00 1 insignificant -0.01692198 0.81343650 lowCoverage 1.000000 lowCoverage 0.183932 0.324324 -0.1340136 5 0.17701 0.308087 -0.1310774 9.8192e-01 6.4876e-04 weaklyHypometh 1.0000e+00 0.2162519 insignificant 9.2595e-01 0.0843062 insignificant 1.0000000 1 insignificant -0.093587 0.3193122 lowCoverage 1.00000 lowCoverage 0.20267 0.324324 -0.104808 5 0.17080 0.308087 -0.137290 0.9979136 4.0691e-03 weaklyHypometh 1 1.0173e-01 insignificant 0.983565 1.3763e-01 insignificant 1 1.000000 insignificant -0.076665 0.4655336 lowCoverage 1.00000 lowCoverage chrX 50846780 50847780 159660 ENSG00000219208 0.65133 284 5 0.4981319 109 5 0.590333 110 5 0.6320944 210 5 0.5261472 87 5 0.564392 216 5 0.5648953 131 5 0.44253 136 5 0.64545 74 5 0.57653 113 5 0.56907 198 5 0.594318 92 5 0.571360 132 5 0.597222 53 5 0.585994 104 5 0.651648 69 5 0.592761 88 5 0.625002 242 5 0.6688095 123 5 0.605424 174 5 0.683834 58 5 0.6590476 77 5 0.571713 134 5 0.629004 44 3 0.66734 103 5 0.581322 134 5 0.68333 31 3 0.649444 48 5 0.583523 145 5 0.6051541 167 5 0.564116 114 5 0.6089596 278 5 0.427778 41 5 0.470776 109 5 0.56429 29 3 0.538713 69 5 0.544638 97 5 0.560510 161 5 0.593483 224 5 0.580275 237 5 0.599787 235 5 0.66585 178 5 0.609058 185 5 0.65744 0.5163207 0.603585 0.6369743 0.5312401 0.580977 0.585080 0.46503 0.6368625 0.583909 0.58179 0.6212823 0.5812862 0.599223 0.610013 0.6496631 0.614333 0.620131 0.6829512 0.6231251 0.6894903 0.6576524 0.5738279 0.618032 0.65116 0.59844 0.68633 0.625103 0.61201 0.6181922 0.58237 0.629715 0.439415 0.476216 0.5608466 0.518028 0.559126 0.576666 0.608884 0.582235 0.617487 0.68750 0.622532 5 0.59854 0.627157 -0.02024544 5 0.588482 0.60869 -0.0202071 0.9477419 1.1895e-01 insignificant 1 1.000000 insignificant 0.910013 0.22587096 insignificant 1 1.00000 insignificant -0.03622693 0.049254 lowCoverage 1 lowCoverage 0.59854 0.53755 0.0731692 5 0.588482 0.51791 0.0705742 1.1117e-03 9.9667e-01 weaklyHypermeth 1.4438e-02 1.0000e+00 weaklyHypermeth 1.2529e-02 0.980902 weaklyHypermeth 1.8684e-01 1 insignificant 0.069889 0.0261970 lowCoverage 0.476972 lowCoverage 0.59854 0.618508 -0.0184554 5 0.588482 0.605758 -0.0172759 8.7403e-01 2.1603e-01 insignificant 1.0000e+00 1.000000 insignificant 9.5339e-01 0.13484454 insignificant 1.0000e+00 1.00000 insignificant -0.02201760 0.27700741 insignificant 1.00000 insignificant 0.627157 0.53755 0.0935913 5 0.608689 0.51791 0.0907813 3.8996e-04 0.997590 weaklyHypermeth 5.6516e-03 1 weaklyHypermeth 4.1330e-03 0.99950 weaklyHypermeth 7.3680e-02 1 weaklyHypermeth 0.10611592 0.00331204 lowCoverage 0.114208 lowCoverage 0.627157 0.618508 0.0003186 5 0.60869 0.605758 0.0029311 5.0486e-01 4.4654e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.1890e-01 0.3284238 insignificant 1.0000000 1 insignificant 0.014209 0.4826198 lowCoverage 1.00000 lowCoverage 0.53755 0.618508 -0.093682 5 0.51791 0.605758 -0.087850 0.9986487 1.2067e-02 weaklyHypometh 1 2.1939e-01 insignificant 0.998521 1.0358e-02 weaklyHypometh 1 0.386478 insignificant -0.091907 0.0090022 lowCoverage 0.37434 lowCoverage chrX 51826294 51827294 159669 SNORA11E ENSG00000221705 0.77798 633 17 0.8477973 131 13 0.800460 416 17 0.9406941 301 16 0.8393305 163 12 0.796983 413 17 0.8614103 226 17 0.91681 445 17 0.80595 295 17 0.88956 448 17 0.76262 514 17 0.789583 80 6 0.762593 523 17 0.889842 139 11 0.915417 256 17 0.730981 58 5 0.665476 63 6 0.883775 401 16 0.9225394 414 17 0.859643 541 17 0.759050 106 8 0.8085935 203 16 0.902499 194 16 0.837118 233 17 0.89922 229 16 0.819261 362 17 0.82127 455 17 0.855316 234 15 0.803596 463 16 0.9574230 174 14 0.671223 396 17 0.8491520 569 17 0.871587 180 14 0.649192 301 17 0.71718 282 15 0.769327 135 8 0.825376 136 13 0.688901 471 17 0.804934 654 17 0.932692 273 17 0.794428 586 16 0.79137 561 17 0.943510 273 16 0.86693 0.8553722 0.817532 0.9496035 0.8827816 0.940610 0.860714 0.89372 0.8343188 0.889155 0.90289 0.8642892 0.8322321 0.874653 0.923590 0.7337688 0.793187 0.912868 0.9218776 0.8737553 0.8326967 0.7812577 0.9537042 0.931557 0.90382 0.86048 0.82652 0.907635 0.80651 0.9504730 0.75808 0.899545 0.806495 0.682314 0.7438953 0.729708 0.840842 0.690657 0.806082 0.923964 0.802642 0.89442 0.951324 7 0.88638 0.858131 0.02538835 17 0.807662 0.75830 0.0493636 0.0163811 9.9344e-01 weaklyHypermeth 1 1.000000 insignificant 0.667643 0.79223787 insignificant 1 1.00000 insignificant 0.00099483 0.970555 insignificant 1 insignificant 0.88638 0.71561 0.1647753 17 0.807662 0.61417 0.1934947 4.1962e-17 9.9998e-01 weaklyHypermeth 3.4968e-15 1.0000e+00 weaklyHypermeth 1.3682e-02 0.787001 weaklyHypermeth 1.9546e-01 1 insignificant 0.079377 0.0740260 insignificant 1.000000 insignificant 0.88636 0.854282 0.0265041 17 0.798045 0.753240 0.0448050 4.0477e-02 9.9797e-01 weaklyHypermeth 8.6122e-01 1.000000 insignificant 6.3320e-01 0.95488356 insignificant 1.0000e+00 1.00000 insignificant -0.02041477 0.61373767 insignificant 1.00000 insignificant 0.858131 0.71561 0.1406802 17 0.758299 0.61417 0.1441311 1.5438e-07 0.999879 weaklyHypermeth 6.1752e-06 1 weaklyHypermeth 2.5536e-02 0.97875 weaklyHypermeth 3.0766e-01 1 insignificant 0.07838259 0.08512811 insignificant 1.000000 insignificant 0.858765 0.854282 0.0026319 17 0.77621 0.753240 0.0229732 5.9900e-01 9.4623e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.4818e-01 0.9744643 insignificant 1.0000000 1 insignificant -0.021410 0.6141061 insignificant 1.00000 insignificant 0.71657 0.854282 -0.137238 17 0.64488 0.753240 -0.108364 0.9994271 1.0944e-03 weaklyHypometh 1 4.0534e-02 weaklyHypometh 0.956930 4.2956e-01 insignificant 1 1.000000 insignificant -0.099792 0.0723049 insignificant 1.00000 insignificant chrX 53364598 53365598 159693 IQSEC2 ENSG00000124313 0.51479 253 7 0.3858844 103 7 0.461411 137 7 0.4597112 184 6 0.5760497 77 7 0.586025 158 6 0.4635971 137 7 0.57151 118 7 0.57285 113 7 0.54896 101 6 0.57325 283 7 0.398990 52 5 0.636826 148 6 0.500000 26 3 0.525641 46 3 0.555556 33 2 0.460317 26 3 0.373256 284 6 0.7147109 161 7 0.697471 277 6 0.456944 51 6 0.5255991 116 6 0.682398 55 4 0.696158 94 6 0.72367 407 7 0.697564 233 7 0.51641 181 6 0.606731 65 6 0.602784 175 7 0.6573116 130 7 0.591106 231 7 0.4738094 317 7 0.607937 63 7 0.503324 253 7 0.94149 154 3 0.509157 197 7 0.624768 51 6 0.429545 277 7 0.641254 303 7 0.605105 178 7 0.585029 334 7 0.64187 330 6 0.648543 193 6 0.55471 0.3622266 0.400167 0.4714307 0.5933852 0.633998 0.464360 0.55758 0.5430299 0.601990 0.56146 0.2628524 0.5552502 0.482090 0.540662 0.4991708 0.404260 0.409251 0.6617123 0.6716951 0.4638474 0.5668227 0.6416578 0.649725 0.67565 0.67510 0.49765 0.583123 0.58539 0.6338522 0.58582 0.469631 0.600884 0.455833 0.6404191 0.491810 0.587065 0.404873 0.649592 0.609983 0.627322 0.66953 0.615751 5 0.49577 0.518248 -0.05158477 7 0.479400 0.58864 -0.1092410 0.9966769 1.2253e-02 weaklyHypometh 1 1.000000 insignificant 0.999886 0.00398215 weaklyHypometh 1 0.96172 insignificant -0.07369966 0.039740 weaklyHypometh 1 insignificant 0.49577 0.47638 0.0115981 7 0.479400 0.61664 -0.1372375 8.4745e-02 2.8392e-01 insignificant 7.3056e-01 1.0000e+00 insignificant 6.7101e-01 0.363697 insignificant 1.0000e+00 1 insignificant -0.073863 0.3745969 insignificant 1.000000 insignificant 0.49613 0.615845 -0.1025977 7 0.547886 0.629671 -0.0817850 9.9278e-01 2.7182e-04 weaklyHypometh 1.0000e+00 0.067955 weaklyHypometh 9.9434e-01 0.00039719 weaklyHypometh 1.0000e+00 0.39719 insignificant -0.09551908 0.00075406 weaklyHypometh 0.20754 insignificant 0.518248 0.47638 0.0648209 7 0.588641 0.61664 -0.0279965 3.8469e-03 0.953375 weaklyHypermeth 4.3715e-02 1 weaklyHypermeth 1.2607e-01 0.96893 insignificant 1.0000e+00 1 insignificant -0.00016284 0.99840956 insignificant 1.000000 insignificant 0.518284 0.615845 -0.0489550 7 0.60130 0.629671 -0.0283667 7.9837e-01 6.1522e-02 insignificant 1.0000e+00 1.0000000 insignificant 8.7398e-01 0.2355113 insignificant 1.0000000 1 insignificant -0.021819 0.4687933 insignificant 1.00000 insignificant 0.47533 0.615845 -0.115595 7 0.56187 0.629671 -0.067799 0.8345833 7.3354e-04 weaklyHypometh 1 2.8213e-02 weaklyHypometh 0.942889 4.9924e-02 weaklyHypometh 1 0.941963 insignificant -0.021657 0.7836329 insignificant 1.00000 insignificant chrX 67610850 67611850 159864 ENSG00000219134 0.76672 377 10 0.6667151 122 10 0.606020 140 10 0.7421465 205 10 0.6489641 91 10 0.659130 352 10 0.7159951 72 5 0.76221 148 10 0.53614 133 10 0.74243 102 10 0.71048 329 10 0.583333 88 6 0.742197 179 10 0.607382 46 6 0.729332 160 10 0.730687 82 5 0.792047 71 5 0.772490 275 10 0.6405241 165 10 0.686204 282 10 0.585714 53 2 0.6005361 102 10 0.704894 186 10 0.694211 77 7 0.78125 56 6 0.655736 227 10 0.79071 64 3 0.685714 35 3 0.593296 110 10 0.6800124 228 10 0.667777 199 10 0.7735693 441 10 0.675746 173 10 0.640827 131 10 0.66406 205 10 0.608654 45 4 0.446667 73 3 0.647362 202 10 0.690564 312 10 0.798742 355 10 0.781004 230 10 0.73374 254 10 0.780280 247 10 0.76999 0.6968815 0.637878 0.7815627 0.7140706 0.691711 0.639082 0.81051 0.5998622 0.800830 0.75390 0.6858543 0.7643135 0.660760 0.758830 0.7653546 0.819903 0.769546 0.7276093 0.6942140 0.6182173 0.6975774 0.7355797 0.680224 0.74020 0.71247 0.83259 0.733493 0.65293 0.6936067 0.73063 0.782746 0.696750 0.653314 0.6440051 0.609378 0.570588 0.686518 0.736177 0.827499 0.801468 0.74730 0.810016 3 0.71366 0.710349 0.00475145 10 0.760927 0.69547 0.0654530 0.2071854 9.2074e-01 insignificant 1 1.000000 insignificant 0.259018 0.82413724 insignificant 1 1.00000 insignificant 0.00760525 0.771507 insignificant 1 insignificant 0.71324 0.65501 0.0627576 10 0.717459 0.66785 0.0496074 8.9879e-04 9.9953e-01 weaklyHypermeth 1.2146e-02 1.0000e+00 weaklyHypermeth 8.3678e-03 0.999907 weaklyHypermeth 1.3718e-01 1 insignificant 0.078172 0.0785613 insignificant 1.000000 insignificant 0.71299 0.736767 -0.0553757 10 0.689205 0.755466 -0.0662611 9.9838e-01 5.9199e-03 weaklyHypometh 1.0000e+00 0.931148 insignificant 9.9782e-01 0.00683800 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.06480814 0.02860179 weaklyHypometh 0.98627 insignificant 0.710660 0.65501 0.0587158 10 0.715863 0.66785 0.0480115 9.2572e-03 0.962839 weaklyHypermeth 9.7444e-02 1 weaklyHypermeth 1.6246e-02 0.99421 weaklyHypermeth 2.2106e-01 1 insignificant 0.07056651 0.11549986 insignificant 1.000000 insignificant 0.710333 0.736767 -0.0611910 10 0.68745 0.755466 -0.0680166 9.9993e-01 4.7859e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9925e-01 0.0205424 weaklyHypometh 1.0000000 1 insignificant -0.072413 0.0255731 weaklyHypometh 1.00000 insignificant 0.65459 0.736767 -0.120171 10 0.63464 0.755466 -0.120829 0.9999805 5.4307e-06 weaklyHypometh 1 5.4307e-04 weaklyHypometh 0.999997 1.0683e-04 weaklyHypometh 1 0.015262 weaklyHypometh -0.142980 0.0075986 weaklyHypometh 0.35565 insignificant chrX 68048923 68049923 159895 EFNB1 ENSG00000090776 0.43789 275 7 0.1315620 150 7 0.144982 151 7 0.2096252 256 6 0.2646919 132 8 0.242937 245 8 0.1081212 267 8 0.33062 209 9 0.18858 239 8 0.20212 252 8 0.44066 228 8 0.155801 118 7 0.068467 421 8 0.204167 80 6 0.155455 184 8 0.029557 93 5 0.126889 93 7 0.149567 269 7 0.1136213 148 8 0.346110 285 7 0.090909 51 3 0.1453641 191 7 0.193673 101 6 0.422206 76 8 0.27980 112 6 0.298959 220 7 0.28947 166 9 0.153474 176 9 0.449089 141 7 0.0964060 165 7 0.257237 201 7 0.4269248 329 8 0.241021 117 7 0.392487 125 7 0.11392 86 2 0.088471 82 6 0.239340 77 7 0.297544 225 7 0.248454 392 6 0.142849 243 6 0.065231 420 6 0.41992 327 7 0.027275 261 7 0.35686 0.0503287 0.193995 0.0379436 0.2023071 0.103621 0.059992 0.29209 0.1890525 0.186512 0.37555 0.1138631 0.0272324 0.074688 0.031880 0.0175222 0.157717 0.033104 0.0818480 0.2131599 0.0332536 0.0102472 0.1562804 0.403543 0.27474 0.35683 0.31815 0.185157 0.31160 0.0193234 0.24452 0.228272 0.138011 0.406219 0.1940066 0.128661 0.342695 0.268635 0.218066 0.028992 0.015177 0.37773 0.030785 6 0.14725 0.215137 -0.06270031 8 0.265748 0.22549 0.0402578 0.9980498 1.2469e-02 weaklyHypometh 1 1.000000 insignificant 0.996748 0.00410408 weaklyHypometh 1 0.96172 insignificant -0.05605508 0.220851 insignificant 1 insignificant 0.14725 0.27809 -0.1406665 6 0.265748 0.23175 0.0339960 9.1524e-01 2.0322e-08 weaklyHypometh 1.0000e+00 1.0161e-05 weaklyHypometh 8.8571e-01 0.106009 insignificant 1.0000e+00 1 insignificant -0.026227 0.6325456 insignificant 1.000000 insignificant 0.14704 0.144248 0.0039664 6 0.198998 0.265151 -0.0661534 5.9413e-01 3.5191e-01 insignificant 1.0000e+00 1.000000 insignificant 5.6636e-01 0.86288906 insignificant 1.0000e+00 1.00000 insignificant 0.02182545 0.78287556 insignificant 1.00000 insignificant 0.215137 0.27809 -0.0698530 6 0.225490 0.23175 -0.0062618 6.6991e-01 0.046374 weaklyHypometh 1.0000e+00 1 insignificant 3.6427e-01 0.83059 insignificant 1.0000e+00 1 insignificant 0.02982829 0.62371652 insignificant 1.000000 insignificant 0.215249 0.144248 0.0762466 6 0.24599 0.265151 -0.0191619 6.2080e-02 8.0490e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.1544e-01 0.9551528 insignificant 1.0000000 1 insignificant 0.077881 0.3644934 insignificant 1.00000 insignificant 0.27848 0.144248 0.158164 6 0.25282 0.265151 -0.012331 0.0050575 9.8405e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.218305 9.4192e-01 insignificant 1 1.000000 insignificant 0.048052 0.5875896 insignificant 1.00000 insignificant chrX 68132258 68133258 159908 EFNB1 ENSG00000090776 0.86533 173 6 0.7535841 142 10 0.840297 272 10 0.9603175 55 4 0.9002861 152 9 0.885305 101 6 0.8625216 169 10 0.86192 253 10 0.86197 159 10 0.88610 208 10 0.85336 294 10 0.865481 92 10 0.934413 290 10 0.958333 27 3 0.883398 122 7 0.793155 59 5 0.677350 79 6 0.677618 46 3 0.8654553 245 10 0.867746 174 6 0.808974 50 5 0.7464896 40 3 0.864343 98 9 0.889151 81 8 0.95417 40 4 0.867844 321 10 0.79389 137 9 0.869062 136 8 0.878227 259 10 0.9225768 180 10 0.889654 258 10 0.8839036 246 10 0.121111 110 7 0.401042 168 9 0.61024 219 8 0.547619 54 4 0.199777 75 4 0.428715 250 10 0.703904 174 7 0.513550 64 5 0.731225 119 9 0.72218 132 9 0.853704 67 6 0.82560 0.7277588 0.823319 0.9162602 0.9132862 0.925636 0.843619 0.82065 0.8349769 0.842685 0.89485 0.8731932 0.9132880 0.924977 0.892252 0.8033576 0.547630 0.648408 0.8849840 0.8514241 0.8765546 0.6436670 0.9352274 0.815921 0.92216 0.86894 0.80690 0.920783 0.87975 0.9067368 0.87031 0.899785 0.145709 0.442750 0.6782430 0.530938 0.222288 0.456591 0.821369 0.768279 0.722814 0.72064 0.781271 2 0.85925 0.878657 -0.02088096 10 0.858475 0.87928 -0.0208015 0.9892414 1.6345e-01 insignificant 1 1.000000 insignificant 0.959823 0.24159294 insignificant 1 1.00000 insignificant -0.01132682 0.635341 insignificant 1 insignificant 0.85925 0.45662 0.4072581 10 0.858475 0.47068 0.3877926 6.6713e-39 1.0000e+00 hypermethylated 6.6713e-36 1.0000e+00 hypermethylated 5.0822e-15 1.000000 hypermethylated 5.0822e-12 1 hypermethylated 0.467946 0.0015091 weaklyHypermeth 0.058522 weaklyHypermeth 0.85925 0.755396 0.0968386 6 0.858475 0.712709 0.1457659 2.8227e-10 9.9748e-01 weaklyHypermeth 7.0567e-08 1.000000 weaklyHypermeth 1.7838e-05 0.98744223 weaklyHypermeth 4.4961e-03 1.00000 weaklyHypermeth 0.14778496 0.05124370 insignificant 1.00000 insignificant 0.878657 0.45662 0.4209033 10 0.879277 0.47068 0.4085941 8.4344e-27 1.000000 hypermethylated 2.8115e-24 1 hypermethylated 7.5466e-13 1.00000 hypermethylated 7.5466e-10 1 hypermethylated 0.47927233 0.00136976 weaklyHypermeth 0.055733 weaklyHypermeth 0.878657 0.755396 0.1177985 6 0.87928 0.712709 0.1665673 1.4262e-08 9.9866e-01 weaklyHypermeth 2.8523e-06 1.0000000 weaklyHypermeth 8.7891e-05 0.9986938 weaklyHypermeth 0.0143494 1 weaklyHypermeth 0.159112 0.0408854 weaklyHypermeth 1.00000 insignificant 0.45662 0.755396 -0.232092 6 0.47068 0.712709 -0.242027 0.9998807 1.2588e-05 hypomethylated 1 9.6827e-04 hypomethylated 0.999995 4.8275e-05 hypomethylated 1 0.009655 hypomethylated -0.320161 0.0090938 weaklyHypometh 0.37434 insignificant chrX 68154971 68155971 159913 EFNB1 ENSG00000090776 0.90290 232 5 0.8969697 56 4 0.707881 112 3 0.7757265 108 5 0.7858723 60 3 0.945714 123 5 0.6654286 96 5 0.83790 100 3 0.92051 75 3 0.89105 50 3 0.88334 163 5 0.980392 21 1 0.968615 75 2 1.000000 4 0 0.605114 32 2 0.683333 21 2 0.402446 53 2 0.686315 147 3 0.8173188 102 3 0.863824 197 5 0.791667 27 2 0.5067340 30 2 0.907576 92 3 0.989474 37 3 0.85414 44 3 0.829295 166 5 0.70384 84 3 0.631579 46 2 0.918355 109 5 0.8840741 103 5 0.793622 175 5 0.9064965 224 5 0.525911 97 5 0.660379 138 5 0.48143 225 3 0.766667 16 2 0.694444 27 2 0.485832 201 5 0.807589 181 5 0.830263 102 5 0.861714 181 4 0.73077 123 3 0.877110 90 5 0.88571 0.8682796 0.843384 0.8963882 0.8321845 0.892012 0.798433 0.85068 0.8616596 0.859680 0.87046 0.9677419 0.9629591 0.933865 0.775049 0.8878136 0.631106 0.676181 0.9176315 0.8140526 0.9139785 0.7088085 0.8929619 0.981890 0.75059 0.87982 0.73420 0.895303 0.84930 0.8467622 0.79381 0.882902 0.532102 0.413590 0.5394655 0.666703 0.704301 0.340395 0.804475 0.750424 0.767023 0.86911 0.812587 2 0.84447 0.857520 -0.01195581 3 0.760702 0.74987 0.0108314 0.8396267 3.9828e-01 lowCoverage 1 1.000000 lowCoverage 0.599559 0.79331063 lowCoverage 1 1.00000 lowCoverage 0.00129490 0.980250 lowCoverage 1 lowCoverage 0.84447 0.49858 0.3473987 3 0.760702 0.54709 0.2136111 1.8577e-11 9.9982e-01 lowCoverage 8.4440e-10 1.0000e+00 lowCoverage 3.5620e-05 0.998782 lowCoverage 1.6895e-03 1 lowCoverage 0.208588 0.0056252 lowCoverage 0.175786 lowCoverage 0.84700 0.802068 0.0261952 3 0.846176 0.838070 0.0081057 4.8389e-02 6.3982e-01 lowCoverage 9.6778e-01 1.000000 lowCoverage 2.9429e-02 0.67889917 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.01045651 0.80703298 lowCoverage 1.00000 lowCoverage 0.857520 0.49858 0.3588424 3 0.749871 0.54709 0.2027797 3.9735e-11 0.998852 lowCoverage 2.6490e-09 1 lowCoverage 7.9303e-05 0.99785 lowCoverage 3.1852e-03 1 lowCoverage 0.20729350 0.00703036 lowCoverage 0.206775 lowCoverage 0.861185 0.802068 0.0360645 5 0.86651 0.838070 0.0284414 2.1155e-01 8.2018e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.4043e-01 0.7740017 insignificant 1.0000000 1 insignificant -0.011751 0.8065807 lowCoverage 1.00000 lowCoverage 0.50072 0.802068 -0.330117 3 0.59937 0.838070 -0.238704 0.9999683 9.6955e-06 lowCoverage 1 8.0796e-04 lowCoverage 0.999859 1.8427e-03 lowCoverage 1 0.131622 lowCoverage -0.219045 0.0050073 lowCoverage 0.29455 lowCoverage chrX 68217207 68218207 159924 EFNB1 ENSG00000090776 0.64830 30 3 0.6154861 82 7 0.264021 149 7 0.6666667 11 0 0.7452381 21 3 0.678571 24 3 0.5312500 38 4 0.88125 29 3 0.42262 22 3 0.65357 19 2 0.88021 82 4 0.416667 11 0 0.422947 54 4 NA 0 0 0.383333 24 2 0.791667 12 0 0.565476 33 4 0.733333 16 0 0.5255682 39 4 0.479762 34 3 0.500000 13 1 0.5000000 2 0 0.716667 37 3 0.708333 20 2 0.61111 6 0 0.698674 160 7 0.83750 17 2 0.500000 7 0 0.950000 11 1 0.6654762 86 7 0.676742 160 7 0.5999150 58 7 0.366819 95 7 0.565278 47 4 0.37500 51 4 0.208333 13 0 0.750000 8 0 0.426979 148 7 0.420068 39 5 0.692347 39 5 0.533333 22 3 0.25000 10 0 0.722222 18 3 0.33333 0.4000000 0.090909 NA 0.6000000 0.500000 0.250000 0.75000 0.2857143 0.400000 0.83333 0.0000000 0.0909091 NA 0.000000 0.5000000 0.000000 NA 0.4000000 0.2500000 0.6666667 0.0000000 1.0000000 0.333333 0.33333 0.38462 0.80000 0.000000 1.00000 0.6666667 0.30000 0.500000 0.000000 0.400000 0.0000000 0.000000 0.500000 0.454545 0.000000 0.500000 0.000000 NA NA 0 0.56575 0.703640 -0.14308598 3 0.530141 0.66880 -0.1386546 0.9998139 3.3382e-04 lowCoverage 1 0.111274 lowCoverage 0.995872 0.02490341 lowCoverage 1 1.00000 lowCoverage -0.06865231 0.228819 lowCoverage 1 lowCoverage 0.56575 0.45580 0.1250079 4 0.530141 0.43429 0.0958503 1.1170e-02 9.1062e-01 lowCoverage 1.1758e-01 1.0000e+00 lowCoverage 2.7746e-02 0.928749 lowCoverage 3.3429e-01 1 lowCoverage 0.146314 0.1275393 lowCoverage 1.000000 lowCoverage 0.56575 0.578125 -0.0680641 0 0.530141 0.564856 -0.0347148 6.3003e-01 2.6933e-01 noCoverage 1.0000e+00 1.000000 noCoverage 5.9974e-01 0.68221777 noCoverage 1.0000e+00 1.00000 noCoverage 0.07145507 0.48644891 lowCoverage 1.00000 lowCoverage 0.703640 0.45580 0.2458962 5 0.668795 0.43429 0.2345049 1.9740e-07 0.999998 hypermethylated 7.5923e-06 1 hypermethylated 8.0824e-04 0.99985 hypermethylated 2.2451e-02 1 hypermethylated 0.21496658 0.03763422 lowCoverage 0.633261 lowCoverage 0.703640 0.578125 0.0908423 2 0.66880 0.564856 0.1039398 1.0616e-02 9.8090e-01 lowCoverage 2.7220e-01 1.0000000 lowCoverage 8.0917e-02 0.8994903 lowCoverage 1.0000000 1 lowCoverage 0.140107 0.1976856 lowCoverage 1.00000 lowCoverage 0.45580 0.578125 -0.139314 2 0.43429 0.564856 -0.130565 0.9839845 1.1940e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.983376 2.8822e-01 lowCoverage 1 1.000000 lowCoverage -0.074859 0.5365182 lowCoverage 1.00000 lowCoverage chrX 68219046 68220046 159926 EFNB1 ENSG00000090776 0.79563 173 5 0.6489146 148 5 0.728834 181 5 0.7983982 87 5 0.7359894 113 5 0.806907 191 5 0.6533880 132 5 0.63443 200 5 0.71444 143 5 0.84006 138 5 0.83332 213 5 0.715152 38 4 0.642841 165 5 0.798485 37 3 0.592629 98 4 0.693939 37 4 0.290869 72 3 0.743882 99 4 0.5797596 225 5 0.658142 241 5 0.635714 55 5 0.5106914 82 5 0.796566 72 4 0.707957 106 5 0.62163 80 5 0.705483 266 5 0.73848 191 5 0.605504 102 5 0.695972 222 5 0.6962155 168 5 0.677819 286 5 0.7017326 265 5 0.439492 111 4 0.388693 148 5 0.75173 147 5 0.308658 75 5 0.370553 86 4 0.415621 281 5 0.645864 221 5 0.599691 75 5 0.608571 142 5 0.76064 146 5 0.592938 81 4 0.79804 0.6708988 0.741691 0.8538242 0.8013137 0.840927 0.712640 0.80936 0.7556939 0.864231 0.84020 0.8354709 0.7248350 0.773551 0.722321 0.6821954 0.477899 0.720008 0.6571707 0.7889499 0.8929461 0.7340078 0.8545803 0.865428 0.77731 0.78452 0.76174 0.770218 0.78373 0.7775850 0.75426 0.867501 0.513150 0.456952 0.8695159 0.327415 0.567366 0.488988 0.790324 0.722319 0.729421 0.75568 0.844237 4 0.76236 0.791029 -0.03304720 5 0.686580 0.53130 0.1552817 0.0914814 1.3424e-01 insignificant 1 1.000000 insignificant 0.398910 0.17358007 insignificant 1 1.00000 insignificant 0.02082001 0.553098 lowCoverage 1 lowCoverage 0.76236 0.56604 0.1989736 5 0.686580 0.33900 0.3475777 1.1754e-09 9.9944e-01 weaklyHypermeth 4.3534e-08 1.0000e+00 weaklyHypermeth 4.2957e-05 0.999981 weaklyHypermeth 1.7183e-03 1 weaklyHypermeth 0.249509 0.0089348 lowCoverage 0.241481 lowCoverage 0.76236 0.771429 -0.0052413 5 0.686580 0.563400 0.1231802 4.6904e-01 6.5736e-01 insignificant 1.0000e+00 1.000000 insignificant 5.6715e-01 0.59259495 insignificant 1.0000e+00 1.00000 insignificant 0.05376002 0.22210729 lowCoverage 1.00000 lowCoverage 0.791029 0.56604 0.2338080 5 0.531298 0.33900 0.1922961 1.3859e-08 1.000000 hypermethylated 6.5994e-07 1 hypermethylated 2.5540e-05 1.00000 hypermethylated 1.8243e-03 1 hypermethylated 0.22868911 0.01404511 lowCoverage 0.312113 lowCoverage 0.791029 0.771429 0.0272262 5 0.53130 0.563400 -0.0321015 2.0357e-01 7.9435e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.6227e-01 0.9557752 insignificant 1.0000000 1 insignificant 0.032940 0.4069582 lowCoverage 1.00000 lowCoverage 0.56604 0.771429 -0.209700 5 0.33900 0.563400 -0.224398 0.9999834 1.5715e-03 weaklyHypometh 1 5.0694e-02 weaklyHypometh 0.999995 9.5626e-03 weaklyHypometh 1 0.382505 insignificant -0.195749 0.0276611 lowCoverage 0.76836 lowCoverage chrX 68358282 68359282 159956 CXorf62 ENSG00000215162 0.61592 98 6 0.0965278 75 6 0.295844 86 6 0.0086957 63 5 0.1221949 75 6 0.126263 45 3 0.0045045 167 6 0.32328 50 3 0.17521 81 3 0.51389 42 3 0.35038 115 6 0.016667 35 3 0.400000 44 3 0.000000 4 0 0.176471 54 3 0.017544 43 3 0.031250 29 2 0.041667 21 1 0.0196078 60 3 0.309775 102 5 0.000000 32 4 0.0000000 21 1 0.000000 61 6 0.323016 27 3 0.17316 143 5 0.088920 138 6 0.41217 33 2 0.044444 22 1 0.539719 53 4 0.0238095 62 6 0.072165 131 6 0.0047619 112 6 0.027778 61 6 0.085855 78 5 0.00000 8 0 0.335417 34 2 0.239418 44 5 0.134448 113 6 0.383095 173 6 0.042929 55 5 0.000000 127 5 0.43137 36 1 0.000000 58 5 0.58741 0.0459656 0.259516 0.0282954 0.1528788 0.068783 0.017589 0.42812 0.2665853 0.395503 0.45832 0.0650794 0.1610852 NA 0.117647 0.0685046 NA 0.019841 0.0205415 0.4598765 0.1663843 0.0000000 0.0000000 0.649723 0.29357 0.12968 0.39062 0.289242 0.52229 0.0113379 0.15924 0.018594 0.013228 0.081610 0.0338749 0.166865 0.089065 0.114102 0.362922 0.029101 0.000000 0.39276 0.000000 1 0.18076 0.151699 0.05242767 5 0.204932 0.11374 0.0911884 0.0038149 9.9150e-01 weaklyHypermeth 1 1.000000 insignificant 0.018767 0.91617808 weaklyHypermeth 1 1.00000 insignificant 0.04210393 0.539364 lowCoverage 1 lowCoverage 0.18076 0.10089 0.1084709 4 0.204932 0.11508 0.0898494 4.3225e-02 9.9761e-01 lowCoverage 3.9656e-01 1.0000e+00 lowCoverage 1.1805e-01 0.992163 lowCoverage 1.0000e+00 1 lowCoverage 0.045132 0.5137765 lowCoverage 1.000000 lowCoverage 0.18076 0.195991 0.0189003 4 0.204932 0.191384 0.0135485 4.2350e-01 7.6587e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 1.7432e-01 0.95608664 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.01080559 0.92193240 lowCoverage 1.00000 lowCoverage 0.151515 0.10355 0.0506391 4 0.097495 0.24150 -0.1440049 6.9920e-01 0.448065 lowCoverage 1.0000e+00 1 lowCoverage 8.7948e-01 0.63672 lowCoverage 1.0000e+00 1 lowCoverage 0.00302839 0.96834226 lowCoverage 1.000000 lowCoverage 0.151699 0.195991 -0.0286821 5 0.11374 0.191384 -0.0776399 9.5794e-01 1.3566e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.8521e-01 0.9327325 insignificant 1.0000000 1 insignificant -0.031298 0.7858439 lowCoverage 1.00000 lowCoverage 0.10089 0.195991 -0.082387 4 0.11508 0.191384 -0.076301 0.9946124 2.5922e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.782778 9.4838e-01 lowCoverage 1 1.000000 lowCoverage -0.034327 0.7656237 lowCoverage 1.00000 lowCoverage chrX 68422079 68423079 159970 CXorf62 ENSG00000215162 0.38640 322 7 0.0027548 170 10 0.069070 233 10 0.0064516 239 7 0.1400738 165 10 0.157372 310 8 0.0000000 283 10 0.30653 254 10 0.15066 248 10 0.17862 295 10 0.21960 239 10 0.052542 170 10 0.177012 305 7 0.000000 84 6 0.017385 199 10 0.000000 139 10 0.090774 169 5 0.013878 266 7 0.0979364 244 9 0.462642 284 8 0.043403 78 8 0.0066057 205 10 0.010417 146 7 0.161804 213 10 0.11019 182 10 0.057914 409 10 0.19099 242 11 0.094784 174 9 0.090989 198 9 0.0026316 228 7 0.150119 326 10 0.0349041 416 10 0.026515 140 10 0.067303 166 7 0.26032 173 7 0.133333 100 5 0.100000 82 5 0.089182 312 10 0.515911 418 10 0.024679 215 10 0.015152 431 10 0.25424 447 7 0.062500 205 7 0.39698 0.0057922 0.101405 0.0090232 0.0677037 0.068239 0.000000 0.27299 0.1878503 0.172894 0.32597 0.0161877 0.0360213 0.032116 0.014620 0.0000000 0.155478 0.022631 0.0147753 0.3504080 0.0274864 0.0085825 0.0182595 0.206761 0.11080 0.09546 0.20682 0.099834 0.15005 0.0050301 0.11019 0.023811 0.019602 0.051714 0.3538983 0.063714 0.011655 0.083762 0.427096 0.016884 0.000000 0.28115 0.004388 7 0.12105 0.085552 0.03540737 10 0.133099 0.10095 0.0321521 0.1092397 9.9894e-01 insignificant 1 1.000000 insignificant 0.850743 0.90666462 insignificant 1 1.00000 insignificant 0.04692319 0.193465 insignificant 1 insignificant 0.12105 0.12025 0.0016409 10 0.133099 0.18286 -0.0497598 5.3951e-02 9.4098e-01 insignificant 4.7744e-01 1.0000e+00 insignificant 2.8958e-02 0.974681 weaklyHypermeth 3.4474e-01 1 insignificant 0.013710 0.7624731 insignificant 1.000000 insignificant 0.12105 0.177156 -0.0642402 7 0.133099 0.213945 -0.0808456 9.9996e-01 5.6935e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7734e-01 0.61346854 insignificant 1.0000e+00 1.00000 insignificant -0.04801001 0.65319442 insignificant 1.00000 insignificant 0.085552 0.12025 -0.0316429 10 0.100947 0.18286 -0.0819119 1.0855e-01 0.930266 insignificant 9.4036e-01 1 insignificant 3.6802e-02 0.98551 inconclusive 4.0453e-01 1 insignificant -0.03321284 0.40347477 insignificant 1.000000 insignificant 0.085552 0.177156 -0.1001658 7 0.10095 0.213945 -0.1129977 1.0000e+00 9.3471e-05 weaklyHypometh 1.0000e+00 0.0467354 weaklyHypometh 9.9021e-01 0.5812048 insignificant 1.0000000 1 insignificant -0.094933 0.3817621 insignificant 1.00000 insignificant 0.12025 0.177156 -0.065614 7 0.18286 0.213945 -0.031086 0.9998557 3.0594e-03 weaklyHypometh 1 8.4984e-02 weaklyHypometh 0.998361 6.7154e-02 insignificant 1 1.000000 insignificant -0.061720 0.5689560 insignificant 1.00000 insignificant chrX 68726783 68727783 159999 FAM155B ENSG00000130054 0.69509 350 12 0.6859649 69 3 0.611595 89 5 0.6500611 204 9 0.7200120 68 5 0.737415 321 12 0.5997024 96 5 0.76407 91 5 0.63431 67 3 0.77681 81 5 0.70234 242 11 0.396006 67 5 0.742953 105 8 0.541667 14 0 0.718413 79 4 0.652782 74 5 0.599415 163 5 0.751091 218 9 0.7963273 120 7 0.673076 275 12 0.575879 62 3 0.6706349 68 6 0.647948 159 5 0.778388 87 4 0.80348 94 9 0.721296 140 8 0.75472 54 7 0.770000 64 5 0.684172 120 5 0.8112452 107 2 0.843485 107 5 0.7815632 347 12 0.643720 88 6 0.442532 129 8 0.71429 56 5 0.675000 67 6 0.571654 84 2 0.662912 130 8 0.677268 324 9 0.701259 304 12 0.648099 278 12 0.72482 263 12 0.793264 237 9 0.63725 0.8111243 0.606039 0.6635171 0.6654559 0.705730 0.659488 0.72775 0.6243423 0.756189 0.71473 0.5113410 0.7796097 0.627316 0.724007 0.7436171 0.610539 0.713898 0.7368279 0.6829169 0.7136840 0.7439579 0.6358677 0.692869 0.72468 0.73914 0.52767 0.665056 0.75337 0.7294717 0.67320 0.685747 0.588304 0.540136 0.5750179 0.715865 0.580478 0.649701 0.763817 0.673434 0.671098 0.72722 0.716821 2 0.69173 0.715401 -0.03376179 9 0.711104 0.76182 -0.0507108 0.9954341 5.2980e-03 weaklyHypometh 1 0.883006 insignificant 0.993482 0.00102301 weaklyHypometh 1 0.51150 insignificant -0.06444562 0.046260 weaklyHypometh 1 insignificant 0.69170 0.62816 0.0813783 5 0.711959 0.60848 0.1034767 7.5763e-05 9.9970e-01 weaklyHypermeth 1.2834e-03 1.0000e+00 weaklyHypermeth 1.0323e-02 0.959013 weaklyHypermeth 1.6385e-01 1 insignificant 0.054104 0.2656764 insignificant 1.000000 insignificant 0.69173 0.746799 -0.0319149 9 0.711104 0.690264 0.0208403 7.0947e-01 1.1322e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1992e-01 0.11542149 insignificant 1.0000e+00 1.00000 insignificant -0.03648696 0.28343244 insignificant 1.00000 insignificant 0.715302 0.62816 0.1017758 5 0.762724 0.60848 0.1542422 2.2281e-08 0.999996 weaklyHypermeth 1.0128e-06 1 weaklyHypermeth 1.6267e-04 0.99903 weaklyHypermeth 5.7139e-03 1 weaklyHypermeth 0.11855008 0.03177828 weaklyHypermeth 0.573941 insignificant 0.715401 0.746799 0.0090209 9 0.76182 0.690264 0.0715511 5.3164e-01 8.8030e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7705e-02 0.9854805 insignificant 1.0000000 1 insignificant 0.027959 0.4213960 insignificant 1.00000 insignificant 0.62816 0.746439 -0.098375 6 0.60848 0.666438 -0.057956 0.9997033 2.3838e-04 weaklyHypometh 1 1.0767e-02 weaklyHypometh 0.987357 2.1171e-02 weaklyHypometh 1 0.529272 insignificant -0.090591 0.0899309 insignificant 1.00000 insignificant chrX 69582229 69583229 160054 DLG3 ENSG00000082458 0.87442 291 8 0.731310 108 5 0.68911 231 8 0.785173 185 8 0.74443 130 5 0.701937 246 7 0.778036 205 8 0.87607 247 7 0.81845 207 6 0.766142 301 6 0.84854 291 8 0.771446 63 4 0.760731 296 8 0.835075 113 4 0.749091 138 7 0.4609105 59 6 0.33472 30 2 0.776249 199 8 0.762854 297 7 0.76380 302 8 0.67901 52 4 0.70267 93 7 0.76637 101 7 0.75511 109 4 0.76045 130 8 0.87810 263 6 0.75862 257 7 0.86612 132 4 0.71911 260 5 0.808770 165 5 0.80319 235 8 0.85876 377 8 0.52028 93 4 0.46361 198 8 0.79688 90 8 0.88427 61 7 0.34471 81 6 0.71918 236 7 0.76686 303 8 0.725419 170 8 0.75603 344 7 0.82281 355 8 0.754817 148 8 0.86826 0.729049 0.722753 0.822715 0.77252 0.843778 0.802462 0.90125 0.79926 0.823979 0.84784 0.7368213 0.792754 0.80569 0.823899 0.5033662 0.52761 0.809899 0.778936 0.74614 0.812179 0.691523 0.794988 0.84028 0.89194 0.86787 0.789949 0.81320 0.82642 0.812382 0.77882 0.866949 0.49393 0.31928 0.68077 0.846795 0.337730 0.83756 0.78455 0.728556 0.795773 0.83262 0.693079 4 0.80096 0.82383 -0.0169731 8 0.76743 0.75360 0.0138311 0.84939 0.28064150 insignificant 1 1.00000 insignificant 0.93098 0.107465 insignificant 1 1 insignificant -0.038265 0.275543 insignificant 1 insignificant 0.80096 0.61924 0.185109 6 0.76743 0.63605 0.131381 1.4243e-06 9.9967e-01 weaklyHypermeth 0.00023738 1.0000e+00 weaklyHypermeth 0.1642025 9.8102e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1199367 0.23242078 insignificant 1.000000 insignificant 0.80096 0.77348 0.021317 8 0.76743 0.72509 0.042343 0.17807 9.1460e-01 insignificant 1 1.0000000 insignificant 0.51773 0.8132397 insignificant 1 1.0000 insignificant -0.023764 0.47934859 insignificant 1.00000 insignificant 0.82383 0.61924 0.200422 6 0.75360 0.63605 0.1175504 1.3244e-04 9.9881e-01 hypermethylated 0.01324380 1.0000e+00 hypermethylated 0.06078775 9.9691e-01 insignificant 1.000000 1.0000e+00 insignificant 0.158202 0.1265408 insignificant 1.00000 insignificant 0.82383 0.77348 0.0381833 8 0.75360 0.72509 0.02851151 0.040129 9.1086e-01 weaklyHypermeth 1 1.000000 insignificant 0.085233 0.9372600 insignificant 1 1 insignificant 0.0145016 0.565116 insignificant 1 insignificant 0.61924 0.77348 -0.171060 6 0.63605 0.72509 -0.089039 9.9988e-01 6.9551e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9670e-01 4.9676e-01 insignificant 1.000000 1.000000 insignificant -0.143700 0.1570045 insignificant 1.00000 insignificant chrX 69582752 69583752 160055 DLG3 ENSG00000082458 0.82733 203 9 0.779847 112 6 0.70721 178 9 0.791165 127 9 0.77124 119 6 0.745933 196 8 0.813193 151 9 0.82687 151 8 0.80380 128 7 0.795556 147 7 0.89262 274 9 0.824074 47 5 0.787682 150 9 0.906522 53 5 0.755115 95 8 0.2686813 39 4 0.19630 23 2 0.805099 140 9 0.813655 248 8 0.81599 282 9 0.85185 39 2 0.80558 74 8 0.69794 75 8 0.72262 115 5 0.80246 118 9 0.90169 170 7 0.75122 187 8 0.88362 90 5 0.81407 206 6 0.848636 158 6 0.83164 248 9 0.87796 345 9 0.49030 81 5 0.59088 123 9 0.89583 62 6 0.87765 49 5 0.55153 82 6 0.71608 264 8 0.77343 216 9 0.839687 111 6 0.80321 258 8 0.84261 253 9 0.831854 121 9 0.84389 0.740263 0.707488 0.853711 0.77159 0.810312 0.808367 0.87923 0.77824 0.806635 0.89411 0.7283755 0.848293 0.81966 0.805264 0.3784703 0.39524 0.843943 0.810235 0.82811 0.922996 0.804880 0.777758 0.72053 0.83968 0.89122 0.761686 0.79980 0.81435 0.812829 0.78772 0.899863 0.63446 0.52018 0.84200 0.851869 0.609556 0.81194 0.78758 0.832560 0.798466 0.86987 0.831790 2 0.81104 0.83342 -0.0114343 9 0.80161 0.81653 -0.0149139 0.84243 0.30196385 insignificant 1 1.00000 insignificant 0.96151 0.042330 weaklyHypometh 1 1 insignificant -0.069380 0.132475 insignificant 1 insignificant 0.81104 0.74130 0.077643 7 0.80161 0.73652 0.065090 2.5951e-02 9.9649e-01 weaklyHypermeth 0.96114726 1.0000e+00 insignificant 0.2465213 9.0548e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0593507 0.48279098 insignificant 1.000000 insignificant 0.81104 0.79666 -0.010876 9 0.80161 0.81679 -0.015173 0.77947 3.5900e-01 insignificant 1 1.0000000 insignificant 0.94953 0.1524852 insignificant 1 1.0000 insignificant -0.071765 0.10695874 insignificant 1.00000 insignificant 0.83342 0.74130 0.088243 7 0.81653 0.73652 0.0800041 2.8548e-02 9.9343e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.05901180 9.9199e-01 insignificant 1.000000 1.0000e+00 insignificant 0.128731 0.1283479 insignificant 1.00000 insignificant 0.83342 0.79666 0.0022279 9 0.81653 0.81679 -0.00025878 0.267245 6.2500e-01 insignificant 1 1.000000 insignificant 0.291100 0.6877660 insignificant 1 1 insignificant -0.0023846 0.918003 insignificant 1 insignificant 0.74130 0.79666 -0.085918 7 0.73652 0.81679 -0.080263 9.8808e-01 8.9256e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9320e-01 1.5743e-01 insignificant 1.000000 1.000000 insignificant -0.131115 0.1212681 insignificant 1.00000 insignificant chrX 70415215 70416215 160097 ZMYM3 ENSG00000147130 0.55852 338 7 0.581476 149 8 0.51319 104 7 0.661731 191 7 0.72655 56 6 0.647443 242 8 0.524653 70 7 0.59583 136 7 0.58594 74 6 0.593502 50 6 0.63466 357 8 0.400000 19 1 0.630795 136 7 0.585737 65 6 0.531381 78 7 0.4345238 36 4 0.71459 477 1 0.671761 182 8 0.722793 144 7 0.53776 236 7 0.60053 51 6 0.66190 54 6 0.51619 116 8 0.67857 75 7 0.71250 53 7 0.56791 271 7 0.54249 125 7 0.49554 51 6 0.62937 136 7 0.635746 207 7 0.64999 241 7 0.57470 274 7 0.51697 148 7 0.53153 93 7 0.61470 140 8 0.70000 9 0 0.59948 129 7 0.51676 255 7 0.60957 154 7 0.727793 206 7 0.62725 394 7 0.65841 123 7 0.689444 179 7 0.62377 0.551264 0.609453 0.748775 0.70933 0.725962 0.575871 0.65952 0.63775 0.684889 0.64456 0.4272343 0.614191 0.64198 0.596980 0.4386060 0.74969 0.748570 0.705873 0.60034 0.756432 0.675167 0.581215 0.71571 0.80597 0.63558 0.520991 0.51955 0.62265 0.653535 0.75568 0.638280 0.55654 0.57612 0.61485 0.712764 0.600262 0.54876 0.69450 0.749317 0.705404 0.74297 0.776341 6 0.64650 0.69770 -0.0564286 7 0.61078 0.58840 0.0223812 0.46927 0.07699372 insignificant 1 1.00000 insignificant 0.51667 0.080626 insignificant 1 1 insignificant -0.012811 0.647386 insignificant 1 insignificant 0.64650 0.66279 -0.015201 7 0.61078 0.58942 0.021360 5.6144e-02 7.0403e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.4230686 7.7677e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0127361 0.72796755 insignificant 1.000000 insignificant 0.64616 0.82670 -0.141189 7 0.56213 0.66103 -0.098894 0.64424 2.7366e-05 weaklyHypometh 1 0.0136828 weaklyHypometh 0.80568 0.0057245 weaklyHypometh 1 1.0000 insignificant -0.069849 0.03314575 weaklyHypometh 1.00000 insignificant 0.69770 0.66279 0.050089 7 0.58840 0.58942 -0.0010215 4.4979e-02 8.5609e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.15958927 7.9479e-01 insignificant 1.000000 1.0000e+00 insignificant 0.025547 0.4882239 insignificant 1.00000 insignificant 0.69818 0.82670 -0.0606529 7 0.59945 0.66103 -0.06157314 0.175466 4.2631e-05 weaklyHypometh 1 0.042631 weaklyHypometh 0.409659 0.0017502 weaklyHypometh 1 1 insignificant -0.0570380 0.073953 insignificant 1 insignificant 0.66192 0.82670 -0.107263 7 0.53810 0.66103 -0.122924 4.3055e-01 4.1391e-07 weaklyHypometh 1.0000e+00 0.00020696 weaklyHypometh 6.4225e-01 4.9829e-03 weaklyHypometh 1.000000 0.622865 insignificant -0.082585 0.0509998 insignificant 1.00000 insignificant chrX 71596080 71597080 160170 ENSG00000222810 0.74670 116 6 0.615053 94 6 0.48333 13 1 0.649140 110 6 0.47619 40 6 0.738847 84 5 0.642857 41 5 0.71296 45 3 0.80556 20 2 0.420000 16 2 0.60635 173 6 0.608889 44 5 0.668831 50 6 0.720238 27 2 0.612121 57 6 0.5833333 19 2 0.30833 38 2 0.585378 124 6 0.736264 55 4 0.70833 76 4 0.66667 14 1 0.88889 9 0 0.74415 65 5 0.92857 29 4 0.79417 130 5 0.62450 75 6 0.63611 17 1 0.61667 19 1 0.65873 59 6 0.584211 97 4 0.71799 73 6 0.72120 100 6 0.55724 77 6 0.54802 56 6 0.60612 98 6 0.69444 13 0 0.50824 45 3 0.60227 53 4 0.73041 122 6 0.717765 124 6 0.71293 182 6 0.67302 66 5 0.755402 115 6 0.76898 0.668784 0.590698 0.676126 0.41528 0.753430 0.666944 0.77907 0.82171 0.452308 0.61085 0.6719464 0.686198 0.74252 0.676110 0.6046512 0.66815 0.620794 0.725019 0.70698 0.627907 0.736769 0.755952 0.74977 0.81247 0.63331 0.687597 0.70738 0.64784 0.614248 0.73828 0.745854 0.60545 0.59867 0.67299 0.771318 0.604523 0.70226 0.74476 0.755259 0.733683 0.67398 0.781624 0 0.68760 0.79330 -0.0538778 4 0.64247 0.69903 -0.0565555 0.99854 0.01910529 lowCoverage 1 1.00000 lowCoverage 0.97950 0.208933 lowCoverage 1 1 lowCoverage -0.093719 0.033484 lowCoverage 1 lowCoverage 0.68760 0.69006 0.040230 4 0.64247 0.57844 0.064031 5.9675e-04 7.7566e-01 lowCoverage 0.04590357 1.0000e+00 lowCoverage 0.0059623 8.3317e-01 lowCoverage 0.42588 1.0000e+00 lowCoverage 0.0353804 0.36587842 lowCoverage 1.000000 lowCoverage 0.68760 0.79475 -0.071994 6 0.64247 0.71539 -0.072917 0.99479 1.2861e-02 weaklyHypometh 1 1.0000000 insignificant 0.94712 0.1244613 insignificant 1 1.0000 insignificant -0.096468 0.00448215 lowCoverage 0.74703 lowCoverage 0.79330 0.69006 0.093862 4 0.69903 0.57844 0.1205869 1.2792e-06 9.9440e-01 lowCoverage 0.00025583 1.0000e+00 lowCoverage 0.00056750 9.3884e-01 lowCoverage 0.096067 1.0000e+00 lowCoverage 0.129099 0.0064151 lowCoverage 0.80239 lowCoverage 0.79330 0.79475 -0.0128009 4 0.69903 0.71539 -0.01636194 0.629164 4.8138e-01 lowCoverage 1 1.000000 lowCoverage 0.673073 0.4713881 lowCoverage 1 1 lowCoverage -0.0027493 0.936871 lowCoverage 1 lowCoverage 0.69006 0.79475 -0.108827 4 0.57844 0.71539 -0.136949 9.9979e-01 5.8371e-05 lowCoverage 1.0000e+00 0.00972858 lowCoverage 9.9690e-01 2.9121e-03 lowCoverage 1.000000 0.485354 lowCoverage -0.131849 0.0026080 lowCoverage 0.47240 lowCoverage chrX 73386620 73387620 160201 ENSG00000222195 0.17597 257 9 0.123540 214 9 0.13542 476 9 0.080423 63 4 0.25411 203 9 0.041005 190 9 0.034758 520 9 0.30095 331 9 0.18502 432 9 0.066373 452 9 0.27814 389 9 0.013889 227 9 0.025783 424 9 0.000000 13 1 0.130854 198 9 0.0037594 133 7 0.14727 341 9 0.265741 93 6 0.053535 237 9 0.23020 256 8 0.19111 44 3 0.08750 31 2 0.15761 122 9 0.37032 129 9 0.37908 27 1 0.33432 393 9 0.14966 142 9 0.29059 70 5 0.23066 209 9 0.034897 268 9 0.35857 329 9 0.13664 403 9 0.71433 191 9 0.55673 170 8 0.56896 543 9 0.30952 14 0 0.69577 56 5 0.57720 292 8 0.22353 232 9 0.253956 145 9 0.17780 106 7 0.42852 148 6 0.207908 66 2 0.15954 0.025144 0.059171 0.055117 0.20998 0.045002 0.026176 0.29784 0.18307 0.043718 0.20088 0.0053191 0.020216 NA 0.017562 0.0211267 0.14665 0.164184 0.036916 0.23101 0.096690 0.066592 0.042673 0.28309 0.40905 0.24237 0.042347 0.34338 0.18784 0.020964 0.25067 0.026020 0.61998 0.47148 0.58377 0.439260 0.594816 0.42654 0.18434 0.120466 0.093636 0.35718 0.151772 2 0.11066 0.16521 -0.0516776 9 0.16457 0.24639 -0.0818177 0.99987 0.00277221 weaklyHypometh 1 1.00000 insignificant 0.93756 0.020517 weaklyHypometh 1 1 insignificant -0.099409 0.023738 weaklyHypometh 1 insignificant 0.11066 0.59874 -0.484449 9 0.16457 0.63061 -0.466039 1.0000e+00 4.8682e-48 hypomethylated 1.00000000 4.8682e-45 hypomethylated 1.0000000 2.1493e-14 hypomethylated 1.00000 2.1493e-11 hypomethylated -0.4430829 0.00029679 hypomethylated 0.098932 hypomethylated 0.11066 0.20086 -0.092800 8 0.16457 0.31166 -0.147090 1.00000 3.4040e-07 weaklyHypometh 1 0.0003404 weaklyHypometh 0.99999 0.0007922 weaklyHypometh 1 0.7922 insignificant -0.131005 0.03724758 weaklyHypometh 1.00000 insignificant 0.16521 0.59874 -0.429236 9 0.24639 0.63061 -0.3842212 1.0000e+00 4.8864e-26 hypomethylated 1.00000000 4.8864e-23 hypomethylated 0.99999990 2.1152e-10 hypomethylated 1.000000 2.1152e-07 hypomethylated -0.343674 0.0008485 hypomethylated 0.30982 insignificant 0.16521 0.20086 -0.0546042 8 0.24639 0.31166 -0.06527201 0.999377 6.7407e-02 insignificant 1 1.000000 insignificant 0.982260 0.1736592 insignificant 1 1 insignificant -0.0315967 0.585550 insignificant 1 insignificant 0.59874 0.20086 0.363243 8 0.63061 0.31166 0.318949 5.4317e-12 1.0000e+00 hypermethylated 5.4317e-09 1.00000000 hypermethylated 2.0022e-05 1.0000e+00 hypermethylated 0.020022 1.000000 hypermethylated 0.312077 0.0023652 weaklyHypermeth 0.47240 insignificant chrX 82653038 82654038 160449 POU3F4 ENSG00000196767 0.40928 247 10 0.036364 226 10 0.20094 268 10 0.010000 104 5 0.21625 179 9 0.066175 195 10 0.042112 414 11 0.24328 267 10 0.22990 246 9 0.191002 286 9 0.37592 278 9 0.000000 162 9 0.290004 313 9 0.068182 47 5 0.014791 189 9 0.0333333 69 7 0.17930 165 10 0.015584 155 7 0.335124 170 6 0.23808 303 9 0.12987 44 5 0.11587 92 7 0.11364 88 9 0.37413 62 8 0.52932 59 5 0.21303 312 11 0.25275 152 9 0.33641 59 5 0.23834 201 9 0.013689 242 9 0.41691 315 10 0.29449 293 11 0.13810 168 9 0.16284 156 9 0.25000 57 4 0.02250 33 2 0.11574 92 8 0.28999 357 9 0.19166 378 9 0.040053 128 10 0.75247 256 8 0.20018 260 5 0.031311 90 5 0.47939 0.010753 0.321865 0.017473 0.39336 0.081859 0.057915 0.24238 0.34910 0.220684 0.42264 0.0000000 0.347952 0.07242 0.024543 0.0089606 0.25546 0.025346 0.384916 0.29897 0.046083 0.149943 0.141129 0.45204 0.38622 0.26086 0.333120 0.48157 0.30557 0.023180 0.45970 0.343762 0.20102 0.20075 0.18646 0.048387 0.058733 0.25291 0.30742 0.047257 0.728624 0.38030 0.052592 2 0.18422 0.27358 -0.0796300 9 0.17988 0.26105 -0.0811668 0.99996 0.00036844 weaklyHypometh 1 0.36844 insignificant 0.99604 0.016201 weaklyHypometh 1 1 insignificant -0.092588 0.088299 insignificant 1 insignificant 0.18422 0.20278 -0.027877 9 0.17988 0.18680 -0.006917 3.8042e-01 2.1310e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.3008886 8.7323e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0034129 0.94588908 insignificant 1.000000 insignificant 0.18422 0.38129 -0.129507 8 0.17988 0.25684 -0.076958 0.99560 2.3006e-02 weaklyHypometh 1 1.0000000 insignificant 0.88733 0.4929088 insignificant 1 1.0000 insignificant -0.083351 0.56898736 insignificant 1.00000 insignificant 0.27358 0.20278 0.066408 9 0.26105 0.18680 0.0742498 7.5784e-03 9.8812e-01 weaklyHypermeth 0.37495725 1.0000e+00 insignificant 0.01221033 9.9946e-01 weaklyHypermeth 0.718255 1.0000e+00 insignificant 0.089175 0.1450948 insignificant 1.00000 insignificant 0.27358 0.38129 -0.0501542 8 0.26105 0.25684 0.00420908 0.649372 5.5894e-01 insignificant 1 1.000000 insignificant 0.406867 0.9298635 insignificant 1 1 insignificant 0.0092373 0.949655 insignificant 1 insignificant 0.20278 0.38129 -0.133454 8 0.18680 0.25684 -0.070041 9.0251e-01 4.0880e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.5485e-01 4.2568e-01 insignificant 1.000000 1.000000 insignificant -0.079938 0.5890241 insignificant 1.00000 insignificant chrX 90809210 90810210 160722 ENSG00000217212 0.86952 197 8 0.759436 91 8 0.93333 43 5 0.921416 206 8 0.90000 11 0 0.850254 216 9 0.848214 40 2 0.78373 57 5 0.62245 44 4 0.933333 22 1 0.91138 121 9 1.000000 18 1 0.753345 74 5 NA 0 0 0.955556 58 8 0.6111111 10 0 1.00000 20 1 0.850079 289 8 0.832143 69 8 0.83424 176 9 0.93333 8 0 0.87330 80 4 0.93418 127 4 0.94444 32 4 0.96154 64 4 0.85598 135 9 0.90046 79 4 1.00000 17 1 0.79762 43 4 0.857485 135 9 0.80533 113 8 0.88407 259 9 0.85950 61 5 0.78750 91 4 0.80418 157 9 0.80682 60 4 0.64815 27 1 0.87489 161 9 0.92763 170 8 0.847687 200 8 0.88749 249 8 0.82596 134 8 0.921497 199 8 0.94469 0.894527 0.940299 0.959439 1.00000 0.921590 0.787935 0.70807 0.84648 1.000000 0.90359 1.0000000 0.837681 NA 1.000000 0.9396404 1.00000 0.895752 0.944563 0.90547 0.850746 0.941646 0.930153 1.00000 0.94948 0.95377 0.989739 1.00000 0.95309 0.906681 0.95682 0.926607 0.81287 0.82729 0.88692 0.879240 0.604478 0.95709 0.94670 0.911413 0.940818 0.88086 0.938445 1 0.87209 0.89560 -0.0258187 8 0.84745 0.87066 -0.0232086 0.94957 0.04402041 weaklyHypometh 1 1.00000 insignificant 0.96108 0.029011 weaklyHypometh 1 1 insignificant -0.044617 0.156649 lowCoverage 1 lowCoverage 0.87230 0.84022 0.033844 8 0.86270 0.83191 0.030793 2.0484e-01 9.9884e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0707293 9.9562e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0541890 0.21487059 lowCoverage 1.000000 lowCoverage 0.87209 0.90546 -0.032666 8 0.84745 0.88689 -0.039444 0.99032 1.2697e-01 insignificant 1 1.0000000 insignificant 0.78979 0.5331478 insignificant 1 1.0000 insignificant -0.031024 0.34555936 lowCoverage 1.00000 lowCoverage 0.89560 0.83993 0.059910 8 0.87066 0.81323 0.0574234 1.4911e-03 9.9859e-01 weaklyHypermeth 0.08771334 1.0000e+00 weaklyHypermeth 0.00136558 9.9971e-01 weaklyHypermeth 0.163853 1.0000e+00 insignificant 0.098806 0.0293473 weaklyHypermeth 1.00000 insignificant 0.89560 0.90546 -0.0085273 8 0.87066 0.88689 -0.01623570 0.620222 5.0242e-01 insignificant 1 1.000000 insignificant 0.100802 0.9297050 insignificant 1 1 insignificant 0.0135933 0.622308 insignificant 1 insignificant 0.83993 0.90546 -0.065483 8 0.81323 0.88689 -0.073659 9.9968e-01 1.1123e-02 weaklyHypometh 1.0000e+00 0.69519025 insignificant 9.9925e-01 4.8558e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.085213 0.0574631 insignificant 1.00000 insignificant chrX 95977609 95978609 161000 ENSG00000207426 0.82545 350 8 0.779317 141 8 0.73838 111 8 0.731167 201 8 0.89549 51 4 0.833193 312 8 0.780026 111 8 0.82328 113 8 0.87176 109 8 0.756983 104 8 0.78150 280 8 0.767857 75 7 0.774415 130 8 0.659091 23 2 0.860288 177 8 0.9177083 70 7 0.79388 74 7 0.793251 211 8 0.710776 167 8 0.82567 316 8 0.93571 36 5 0.76908 71 5 0.82634 248 8 0.75926 67 7 0.86392 90 8 0.81885 174 8 0.76287 104 8 0.83507 32 3 0.74168 122 8 0.848709 139 8 0.84848 163 8 0.77007 320 8 0.81086 98 8 0.73899 142 8 0.69149 160 8 0.71945 90 7 0.81312 92 8 0.69630 168 8 0.86781 287 8 0.885471 300 8 0.86752 210 8 0.83659 319 8 0.897906 247 8 0.83649 0.781899 0.711600 0.820096 0.90670 0.877872 0.767001 0.84072 0.87251 0.860420 0.87836 0.7404580 0.892445 0.84436 0.845994 0.9139949 0.78146 0.890501 0.811958 0.81806 0.987459 0.867925 0.837616 0.83858 0.86534 0.83089 0.845598 0.81610 0.77857 0.848919 0.84862 0.836025 0.80090 0.74341 0.76612 0.712530 0.782294 0.77006 0.88330 0.872917 0.869463 0.85623 0.864992 4 0.83685 0.83780 -0.0034986 8 0.78427 0.78076 0.0035114 0.77519 0.73062053 insignificant 1 1.00000 insignificant 0.88825 0.205296 insignificant 1 1 insignificant -0.019030 0.385597 insignificant 1 insignificant 0.83685 0.77867 0.055701 8 0.78427 0.72413 0.060135 2.1520e-03 9.9828e-01 weaklyHypermeth 0.14346931 1.0000e+00 insignificant 0.0007251 9.9629e-01 weaklyHypermeth 0.17154 1.0000e+00 insignificant 0.0509395 0.08405642 insignificant 1.000000 insignificant 0.83685 0.88261 -0.034619 8 0.78427 0.88980 -0.105527 0.99797 3.0988e-02 weaklyHypometh 1 1.0000000 insignificant 0.98936 0.0475226 weaklyHypometh 1 1.0000 insignificant -0.075088 0.00039457 weaklyHypometh 0.19729 insignificant 0.83780 0.77867 0.060231 8 0.78076 0.72413 0.0566235 7.3146e-04 9.9990e-01 weaklyHypermeth 0.04571654 1.0000e+00 weaklyHypermeth 0.00011252 1.0000e+00 weaklyHypermeth 0.057711 1.0000e+00 weaklyHypermeth 0.069970 0.0288219 weaklyHypermeth 1.00000 insignificant 0.83780 0.88261 -0.0289469 8 0.78076 0.88980 -0.10903836 0.994246 2.8345e-02 weaklyHypometh 1 1.000000 insignificant 0.921926 0.4755919 insignificant 1 1 insignificant -0.0560575 0.010943 weaklyHypometh 1 insignificant 0.77867 0.88261 -0.088093 8 0.72413 0.88980 -0.165662 1.0000e+00 3.7761e-05 weaklyHypometh 1.0000e+00 0.00944035 weaklyHypometh 1.0000e+00 2.7865e-05 weaklyHypometh 1.000000 0.027865 weaklyHypometh -0.126027 0.0013661 weaklyHypometh 0.45537 insignificant chrX 96236844 96237844 161035 ENSG00000217742 0.63663 137 8 0.64762 84 4 0.95000 15 1 0.74375 134 7 0.85909 34 4 0.60101 85 8 0.72222 33 3 0.81455 44 4 0.78974 32 4 0.55093 22 1 0.69434 122 4 0.86667 18 3 0.58374 69 4 0.75000 33 4 0.90926 39 4 0.63333 10 0 NA 0 0 0.72566 158 6 0.65509 69 8 0.73742 65 8 0.78125 15 1 0.87500 7 0 0.93304 75 4 0.52976 25 4 0.82468 61 3 0.78720 97 8 0.82005 36 4 0.68750 13 0 0.77546 109 4 0.79167 61 8 0.74092 70 8 0.80580 57 7 0.68549 77 4 0.68889 45 3 0.57827 129 8 0.58333 24 0 0.68937 69 4 0.78833 89 8 0.50571 82 4 0.70255 135 7 0.86355 132 8 0.84168 81 3 0.80013 117 7 0.73237 0.72425 0.99211 0.83553 0.88947 0.64856 0.63626 0.80335 0.77935 0.80190 0.67537 0.76842 0.74307 0.67763 0.85702 0.84649 NA 0.76584 0.65546 0.78289 0.84539 0.85526 0.83991 0.64348 0.73043 0.77961 0.78557 0.70395 0.79966 0.89912 0.72444 0.83976 0.68341 0.69152 0.51957 0.60161 0.78907 0.79622 0.75589 0.80458 0.79616 0.81790 0.83113 0 0.73507 0.77636 -0.0360639 4 0.75172 0.80419 -0.052469 0.99703 0.073084 lowCoverage 1 1 lowCoverage 0.99709 0.069110 lowCoverage 1 1 lowCoverage -0.0493052 0.21447 lowCoverage 1 lowCoverage 0.73485 0.67667 0.061687 4 0.72069 0.67030 0.050391 6.6136e-02 0.98284 lowCoverage 1.0000e+00 1 lowCoverage 5.3895e-02 0.98179 lowCoverage 1.0000e+00 1 lowCoverage 0.061107 0.1636868 lowCoverage 1.00000 lowCoverage 0.73495 0.78062 -0.0421643 3 0.72322 0.62330 0.0999108 0.75074 0.150260 lowCoverage 1 1 lowCoverage 0.88403 0.4276065 lowCoverage 1 1 lowCoverage -0.012669 0.863670 lowCoverage 1 lowCoverage 0.77600 0.67667 0.10103 4 0.77971 0.67030 0.10942 5.9708e-04 0.99829 lowCoverage 2.9854e-02 1 lowCoverage 4.9115e-03 0.98662 lowCoverage 3.4603e-01 1 lowCoverage 0.110412 0.0242280 lowCoverage 1.0000 lowCoverage 0.77600 0.78349 -0.008099 3 0.77971 0.77913 0.00058256 0.84867 0.640131 lowCoverage 1 1 lowCoverage 0.527673 0.8728354 lowCoverage 1 1 lowCoverage 0.03663629 0.627584 lowCoverage 1 lowCoverage 0.67667 0.78349 -0.10513 7 0.67030 0.77913 -0.10884 0.99860 1.4875e-03 weaklyHypometh 1 9.9164e-02 weaklyHypometh 0.97955 7.7453e-03 weaklyHypometh 1 9.2788e-01 insignificant -0.073776 0.3508506 lowCoverage 1.00000 lowCoverage chrX 96458162 96459162 161072 ENSG00000217742 0.68673 429 6 0.55059 238 6 0.67222 175 6 0.70969 213 6 0.67388 148 6 0.61940 300 6 0.64764 236 6 0.75014 267 6 0.77897 234 6 0.70421 238 6 0.76454 329 6 0.67053 115 6 0.71800 390 6 0.77315 94 5 0.60880 206 6 0.46818 87 6 0.55598 103 6 0.69221 283 6 0.62141 228 6 0.72684 325 6 0.51021 106 6 0.71673 102 6 0.58658 310 6 0.70681 143 6 0.71863 136 6 0.72952 360 6 0.68183 166 6 0.75220 142 6 0.71990 274 6 0.61364 278 6 0.75683 196 6 0.71243 399 6 0.55824 231 6 0.56506 104 6 0.40429 205 6 0.77647 64 4 0.56284 140 6 0.68054 231 6 0.79102 399 6 0.63358 323 6 0.79013 358 6 0.70863 365 6 0.75016 199 6 0.68083 0.54727 0.69204 0.72121 0.67100 0.61540 0.64696 0.75379 0.77789 0.71951 0.77112 0.67674 0.71191 0.77416 0.60889 0.46145 0.54016 0.70879 0.63429 0.73956 0.50083 0.72275 0.58372 0.71216 0.73409 0.74006 0.68796 0.76690 0.72429 0.60803 0.77605 0.71584 0.55192 0.59219 0.41953 0.77213 0.56887 0.69979 0.79829 0.62207 0.80807 0.70047 0.74547 6 0.66667 0.67534 -0.0116888 6 0.67120 0.68483 -0.013635 0.91505 0.227634 insignificant 1 1 insignificant 0.91547 0.242695 insignificant 1 1 insignificant -0.0141209 0.62048 insignificant 1 insignificant 0.66667 0.55692 0.104901 6 0.67120 0.56356 0.107641 8.8277e-06 0.99981 weaklyHypermeth 5.8851e-04 1 weaklyHypermeth 1.1936e-02 0.99903 weaklyHypermeth 8.5256e-01 1 insignificant 0.078416 0.1992361 insignificant 1.00000 insignificant 0.66667 0.70316 -0.0573216 6 0.67120 0.73264 -0.0614457 0.99925 0.010120 weaklyHypometh 1 1 insignificant 0.99973 0.0034082 weaklyHypometh 1 1 insignificant -0.065050 0.100010 insignificant 1 insignificant 0.67534 0.55692 0.11801 6 0.68483 0.56356 0.12128 1.1762e-06 0.99992 weaklyHypermeth 9.8017e-05 1 weaklyHypermeth 6.6669e-04 0.99993 weaklyHypermeth 9.5242e-02 1 weaklyHypermeth 0.092537 0.1431140 insignificant 1.0000 insignificant 0.67534 0.70316 -0.043122 6 0.68483 0.73264 -0.04781116 0.99376 0.003972 weaklyHypometh 1 1 insignificant 0.988281 0.0011111 weaklyHypometh 1 1 insignificant -0.05092911 0.198643 insignificant 1 insignificant 0.55692 0.70316 -0.16240 6 0.56356 0.73264 -0.16909 0.99993 1.2051e-05 weaklyHypometh 1 3.0128e-03 weaklyHypometh 0.99998 6.6369e-04 weaklyHypometh 1 1.6592e-01 insignificant -0.143466 0.0430896 weaklyHypometh 1.00000 insignificant chrX 101688784 101689784 161561 TMSB15A ENSG00000158164 0.89568 247 9 0.70374 153 9 0.85926 261 9 0.84454 74 4 0.84722 15 1 0.90646 89 6 0.59167 27 3 0.93651 71 6 0.93542 43 3 0.93333 26 3 0.86440 135 6 0.63333 8 0 0.93333 45 6 0.66667 6 0 1.00000 16 2 0.80000 10 2 0.94444 15 2 0.96364 117 5 0.90671 125 4 0.77656 186 7 0.84000 15 2 0.91667 10 1 0.82626 51 6 0.87500 29 3 0.93334 124 4 0.79556 204 9 0.90256 24 1 0.66667 7 0 0.75859 74 6 0.97333 152 9 0.91414 218 9 0.92563 202 8 0.19061 169 8 0.54320 63 6 0.51635 169 9 0.71067 141 6 0.53205 63 6 0.34419 266 9 0.91821 173 9 0.91230 61 4 0.91039 230 7 0.96776 120 6 0.89829 69 6 0.88090 0.88743 0.87776 0.63205 0.88690 0.87662 0.84218 0.98639 0.89062 0.98571 0.78387 0.63342 0.98571 0.88305 0.99694 0.80893 0.92798 0.98528 0.77465 0.88466 0.97143 0.90619 0.80844 0.72693 0.98658 0.82267 0.81593 0.28571 0.43398 0.92619 0.92239 0.91287 0.22772 0.51616 0.59782 0.71197 0.58837 0.28185 0.94659 0.98716 0.86255 0.91854 0.98535 0 0.87995 0.88819 -0.0099850 6 0.86307 0.88051 -0.017440 0.81447 0.179844 insignificant 1 1 insignificant 0.81639 0.435265 insignificant 1 1 insignificant -0.0134995 0.71261 lowCoverage 1 lowCoverage 0.87995 0.45685 0.405711 6 0.86307 0.43401 0.429063 7.9446e-25 1.00000 hypermethylated 7.9446e-22 1 hypermethylated 2.3092e-12 1.00000 hypermethylated 2.3092e-09 1 hypermethylated 0.374300 0.0026648 lowCoverage 0.68675 lowCoverage 0.87995 0.91577 -0.0385053 6 0.86307 0.92256 -0.0594890 0.99561 0.015928 weaklyHypometh 1 1 insignificant 0.69925 0.2148096 insignificant 1 1 insignificant -0.074247 0.016527 lowCoverage 1 lowCoverage 0.88829 0.45809 0.42800 9 0.89246 0.49060 0.40185 1.7023e-14 1.00000 hypermethylated 8.5116e-12 1 hypermethylated 1.8696e-09 1.00000 hypermethylated 1.8696e-06 1 hypermethylated 0.387800 0.0022855 lowCoverage 0.7161 lowCoverage 0.88819 0.91577 -0.031325 6 0.88051 0.92256 -0.04204886 0.74220 0.199775 insignificant 1 1 insignificant 0.398963 0.5042600 insignificant 1 1 insignificant -0.06074708 0.046813 lowCoverage 1 lowCoverage 0.45685 0.91577 -0.42707 6 0.43401 0.92256 -0.48855 1.00000 1.1648e-13 hypomethylated 1 1.1648e-10 hypomethylated 1.00000 4.0709e-08 hypomethylated 1 4.0709e-05 hypomethylated -0.448547 0.0015370 weaklyHypometh 0.62254 insignificant chrX 106726830 106727830 161903 FRMPD3 ENSG00000147234 0.89965 203 5 0.91765 169 5 0.82944 136 5 0.95941 120 5 0.91424 115 5 0.93203 209 5 0.81772 140 5 0.94815 195 5 0.84600 111 5 0.93506 70 5 0.95390 271 5 0.94444 10 1 0.87091 130 5 0.93333 39 3 0.90536 76 5 0.93939 17 1 0.92308 13 1 0.80719 106 5 0.94518 323 5 0.78622 225 5 1.00000 19 3 0.91156 63 5 0.95842 92 5 0.90844 119 5 0.88698 37 5 0.95183 397 5 0.89221 120 5 0.79476 66 5 0.96157 309 5 0.96579 216 5 0.92121 383 5 0.91072 320 5 0.97000 127 5 0.46517 161 5 0.81973 214 4 0.86905 20 2 0.87396 81 5 0.58618 351 5 0.90789 256 5 0.94511 129 5 0.93335 137 5 0.77469 105 5 0.96923 67 5 0.88007 0.93441 0.78548 0.94141 0.86531 0.92170 0.84672 0.93545 0.84529 0.88854 0.94711 0.93163 0.87854 0.91828 0.92961 0.92604 NA 0.95185 0.95131 0.92368 0.99482 0.92078 0.92621 0.88852 0.82666 0.93903 0.89693 0.73666 0.94877 0.96860 0.86685 0.91138 0.97109 0.50284 0.89043 0.83575 0.83690 0.63015 0.89344 0.94566 0.91530 0.69641 0.99253 2 0.91412 0.92804 -0.0099998 5 0.76257 0.93740 -0.174830 0.81825 0.227827 insignificant 1 1 insignificant 0.87845 0.367843 insignificant 1 1 insignificant -0.0215386 0.27901 lowCoverage 1 lowCoverage 0.91412 0.67400 0.234582 5 0.76257 0.74157 0.020998 9.9463e-10 1.00000 hypermethylated 9.9463e-08 1 hypermethylated 5.1552e-02 0.91629 insignificant 1.0000e+00 1 insignificant 0.136405 0.1479734 lowCoverage 1.00000 lowCoverage 0.91480 0.91198 0.0021075 5 0.91508 0.91239 0.0026968 0.52273 0.698225 insignificant 1 1 insignificant 0.64796 0.6573772 insignificant 1 1 insignificant -0.005636 0.882867 lowCoverage 1 lowCoverage 0.92804 0.67400 0.25654 5 0.93740 0.74157 0.19583 3.0909e-07 1.00000 hypermethylated 2.8099e-05 1 hypermethylated 2.5354e-02 0.99581 weaklyHypermeth 1.0000e+00 1 insignificant 0.157943 0.1045140 lowCoverage 1.0000 lowCoverage 0.92804 0.91210 0.014311 5 0.93740 0.92699 0.01041113 0.14689 0.949770 insignificant 1 1 insignificant 0.515610 0.9256977 insignificant 1 1 insignificant 0.01590265 0.687282 lowCoverage 1 lowCoverage 0.67366 0.91198 -0.23019 5 0.68989 0.91239 -0.22250 0.99984 1.0146e-03 weaklyHypometh 1 7.2469e-02 weaklyHypometh 0.99108 1.5109e-01 insignificant 1 1.0000e+00 insignificant -0.142041 0.1465206 lowCoverage 1.00000 lowCoverage chrX 106727264 106728264 161904 FRMPD3 ENSG00000147234 0.90716 284 7 0.90612 206 7 0.83971 188 7 0.95597 177 7 0.94640 144 7 0.82021 261 7 0.86215 180 7 0.92703 251 7 0.86071 160 7 0.93164 103 7 0.92475 316 7 0.82000 21 3 0.77922 195 7 0.93197 47 4 0.89668 99 7 0.96364 33 3 0.53104 37 3 0.84444 177 7 0.94581 371 7 0.81755 307 7 1.00000 32 5 0.89379 100 7 0.95349 120 7 0.89888 149 7 0.87285 55 7 0.96634 457 7 0.78201 170 7 0.81665 101 7 0.95766 370 7 0.97556 256 7 0.93298 449 7 0.90763 411 7 0.95000 155 7 0.57938 205 7 0.56366 236 5 0.86429 30 3 0.86976 108 7 0.69548 415 7 0.91930 368 7 0.93647 184 7 0.93244 245 7 0.81952 192 7 0.95370 103 7 0.90036 0.90842 0.81812 0.94394 0.92250 0.93355 0.87170 0.90895 0.86796 0.90148 0.90501 0.80572 0.90458 0.92425 0.90363 0.95744 0.89522 0.95361 0.94846 0.91878 0.99702 0.88904 0.93388 0.88557 0.83210 0.95427 0.89667 0.79487 0.94824 0.98193 0.91006 0.90732 0.93867 0.56794 0.82318 0.84803 0.84869 0.77388 0.91679 0.93186 0.92163 0.79693 0.95883 4 0.91369 0.92731 -0.0102407 7 0.68002 0.89790 -0.217878 0.92669 0.225904 insignificant 1 1 insignificant 0.96804 0.341840 insignificant 1 1 insignificant -0.0425428 0.14884 insignificant 1 insignificant 0.91369 0.69713 0.203641 7 0.68002 0.64333 0.036691 4.8754e-10 1.00000 hypermethylated 6.0942e-08 1 hypermethylated 1.0212e-01 0.98004 insignificant 1.0000e+00 1 insignificant 0.116851 0.1467387 insignificant 1.00000 insignificant 0.91519 0.91842 -0.0023217 7 0.91431 0.91776 -0.0034521 0.67791 0.535900 insignificant 1 1 insignificant 0.78898 0.6131481 insignificant 1 1 insignificant -0.041676 0.220369 insignificant 1 insignificant 0.92731 0.69713 0.23118 7 0.89790 0.64333 0.25457 9.5276e-08 1.00000 hypermethylated 1.3611e-05 1 hypermethylated 3.5354e-02 0.99995 weaklyHypermeth 1.0000e+00 1 insignificant 0.159393 0.0629901 insignificant 1.0000 insignificant 0.92761 0.91850 0.008914 7 0.93487 0.92804 0.00682754 0.23889 0.935773 insignificant 1 1 insignificant 0.569011 0.9423116 insignificant 1 1 insignificant 0.00086705 0.977851 insignificant 1 insignificant 0.69904 0.91842 -0.20007 7 0.72856 0.91776 -0.18920 0.99999 3.6645e-04 hypomethylated 1 3.3313e-02 hypomethylated 0.99301 2.1013e-01 insignificant 1 1.0000e+00 insignificant -0.158526 0.0653675 insignificant 1.00000 insignificant chrX 106729846 106730846 161906 FRMPD3 ENSG00000147234 0.97174 155 5 0.93279 144 5 0.80001 171 5 1.00000 10 0 0.92364 102 5 0.95162 88 5 0.94153 255 5 0.95827 119 5 0.93260 140 5 0.94825 159 5 0.91634 203 5 0.83714 71 5 0.96696 214 5 NA 0 0 1.00000 82 5 0.90500 80 5 0.89807 109 5 0.90000 20 3 0.88421 155 5 0.91400 153 5 0.89778 49 5 0.91000 17 2 0.99167 89 5 0.96705 75 5 1.00000 7 0 0.89804 156 5 0.95238 86 4 0.95000 40 4 0.98498 180 5 0.95395 84 5 0.95022 209 5 0.94946 216 5 0.96759 82 3 0.61492 173 5 NA 0 0 0.81212 49 4 0.98000 42 5 0.93494 178 5 0.95852 177 5 0.96662 130 5 0.91604 90 5 0.89700 168 5 0.98182 49 4 0.97480 0.91965 0.78495 1.00000 0.93475 0.95987 0.93753 0.94974 0.91952 0.94461 0.91791 0.85316 0.96725 NA 1.00000 0.93228 0.88564 0.93671 0.89840 0.90870 0.93727 0.89937 0.98629 0.95928 1.00000 0.90493 0.94093 0.98101 0.97879 0.94420 0.96115 0.94903 0.94667 0.53755 NA 0.81051 0.96709 0.94543 0.97744 0.95572 0.91025 0.90007 0.98849 2 0.92305 0.95281 -0.0297811 5 0.92309 0.95142 -0.028331 0.99944 0.010180 weaklyHypometh 1 1 insignificant 0.99913 0.017504 weaklyHypometh 1 1 insignificant -0.0250832 0.10770 lowCoverage 1 lowCoverage 0.92305 0.79389 0.129117 5 0.92309 0.81433 0.108765 7.2722e-04 0.99728 weaklyHypermeth 3.6361e-02 1 weaklyHypermeth 1.0003e-01 0.66511 insignificant 1.0000e+00 1 insignificant 0.063464 0.4101341 lowCoverage 1.00000 lowCoverage 0.92305 0.93811 -0.0175612 5 0.92309 0.93813 -0.0150388 0.91322 0.248979 insignificant 1 1 insignificant 0.88211 0.3029329 insignificant 1 1 insignificant -0.018623 0.370417 lowCoverage 1 lowCoverage 0.95281 0.79389 0.15891 5 0.95142 0.81433 0.13710 2.9717e-04 0.99994 weaklyHypermeth 1.5641e-02 1 weaklyHypermeth 6.0298e-02 0.97219 insignificant 1.0000e+00 1 insignificant 0.088547 0.2675176 lowCoverage 1.0000 lowCoverage 0.95281 0.93811 0.011716 5 0.95142 0.93813 0.01329256 0.35612 0.923418 insignificant 1 1 insignificant 0.306566 0.8049564 insignificant 1 1 insignificant 0.00646049 0.741147 lowCoverage 1 lowCoverage 0.79389 0.93811 -0.14620 5 0.81433 0.93813 -0.12380 0.99485 5.1247e-02 insignificant 1 1.0000e+00 insignificant 0.95255 1.0820e-01 insignificant 1 1.0000e+00 insignificant -0.082087 0.3023411 lowCoverage 1.00000 lowCoverage chrX 106730177 106731177 161907 FRMPD3 ENSG00000147234 0.97174 155 5 0.93279 144 5 0.80001 171 5 1.00000 10 0 0.92364 102 5 0.95162 88 5 0.94153 255 5 0.95827 119 5 0.93260 140 5 0.94825 159 5 0.91634 203 5 0.83714 71 5 0.96696 214 5 NA 0 0 1.00000 82 5 0.90500 80 5 0.89807 109 5 0.90000 20 3 0.88421 155 5 0.91400 153 5 0.89778 49 5 0.91000 17 2 0.99167 89 5 0.96705 75 5 1.00000 7 0 0.89804 156 5 0.95238 86 4 0.95000 40 4 0.98498 180 5 0.95395 84 5 0.95022 209 5 0.94946 216 5 0.96759 82 3 0.61492 173 5 NA 0 0 0.81212 49 4 0.98000 42 5 0.93494 178 5 0.95852 177 5 0.96662 130 5 0.91604 90 5 0.89700 168 5 0.98182 49 4 0.97480 0.91965 0.78495 1.00000 0.93475 0.95987 0.93753 0.94974 0.91952 0.94461 0.91791 0.85316 0.96725 NA 1.00000 0.93228 0.88564 0.93671 0.89840 0.90870 0.93727 0.89937 0.98629 0.95928 1.00000 0.90493 0.94093 0.98101 0.97879 0.94420 0.96115 0.94903 0.94667 0.53755 NA 0.81051 0.96709 0.94543 0.97744 0.95572 0.91025 0.90007 0.98849 2 0.92305 0.95281 -0.0297811 5 0.92309 0.95142 -0.028331 0.99944 0.010180 weaklyHypometh 1 1 insignificant 0.99913 0.017504 weaklyHypometh 1 1 insignificant -0.0250832 0.10770 lowCoverage 1 lowCoverage 0.92305 0.79389 0.129117 5 0.92309 0.81433 0.108765 7.2722e-04 0.99728 weaklyHypermeth 3.6361e-02 1 weaklyHypermeth 1.0003e-01 0.66511 insignificant 1.0000e+00 1 insignificant 0.063464 0.4101341 lowCoverage 1.00000 lowCoverage 0.92305 0.93811 -0.0175612 5 0.92309 0.93813 -0.0150388 0.91322 0.248979 insignificant 1 1 insignificant 0.88211 0.3029329 insignificant 1 1 insignificant -0.018623 0.370417 lowCoverage 1 lowCoverage 0.95281 0.79389 0.15891 5 0.95142 0.81433 0.13710 2.9717e-04 0.99994 weaklyHypermeth 1.5641e-02 1 weaklyHypermeth 6.0298e-02 0.97219 insignificant 1.0000e+00 1 insignificant 0.088547 0.2675176 lowCoverage 1.0000 lowCoverage 0.95281 0.93811 0.011716 5 0.95142 0.93813 0.01329256 0.35612 0.923418 insignificant 1 1 insignificant 0.306566 0.8049564 insignificant 1 1 insignificant 0.00646049 0.741147 lowCoverage 1 lowCoverage 0.79389 0.93811 -0.14620 5 0.81433 0.93813 -0.12380 0.99485 5.1247e-02 insignificant 1 1.0000e+00 insignificant 0.95255 1.0820e-01 insignificant 1 1.0000e+00 insignificant -0.082087 0.3023411 lowCoverage 1.00000 lowCoverage chrX 106868346 106869346 161927 TSC22D3 ENSG00000157514 0.93869 277 6 0.76564 162 5 0.89625 293 6 0.83302 191 5 0.94177 85 4 0.88492 184 5 0.88188 148 5 0.86805 190 5 0.85855 164 4 0.90939 134 5 0.91456 179 5 0.81771 58 4 0.88429 150 5 NA 0 0 0.89391 70 4 0.98182 37 3 0.88522 60 5 0.90635 223 5 0.88736 133 5 0.91350 281 6 0.75000 16 2 0.83753 84 5 0.98333 68 5 0.90075 65 5 0.99286 85 5 0.94694 333 6 0.81623 121 5 0.96239 93 5 0.80837 224 4 0.90109 155 6 0.87873 266 6 0.89847 377 6 0.55126 138 6 0.79134 104 5 0.68750 458 6 0.76667 57 4 0.84863 70 5 0.81788 342 6 0.93990 332 5 0.96705 155 5 0.88666 282 5 0.92103 354 5 0.90430 129 5 0.93771 0.77672 0.92936 0.91870 0.90781 0.86883 0.90220 0.91889 0.87033 0.91240 0.89762 0.81561 0.89463 NA 0.89451 0.96647 0.87548 0.89382 0.93920 0.91668 0.93217 0.86635 0.97814 0.90478 0.98683 0.93471 0.87120 0.97933 0.84729 0.91813 0.87439 0.87785 0.53033 0.86193 0.57736 0.81079 0.90553 0.88731 0.91217 0.97428 0.89269 0.91818 0.92072 4 0.90460 0.90514 -0.0027068 5 0.88899 0.90226 -0.013269 0.74551 0.150476 insignificant 1 1 insignificant 0.89730 0.065739 insignificant 1 1 insignificant -0.0022047 0.92901 lowCoverage 1 lowCoverage 0.90460 0.74423 0.178798 5 0.88899 0.71713 0.171857 8.2147e-08 0.99676 weaklyHypermeth 7.4679e-06 1 weaklyHypermeth 3.3356e-03 0.99600 weaklyHypermeth 3.3356e-01 1 insignificant 0.143641 0.0221423 lowCoverage 1.00000 lowCoverage 0.90460 0.91933 -0.0133094 5 0.88899 0.93162 -0.0426263 0.93432 0.083392 insignificant 1 1 insignificant 0.97119 0.1101230 insignificant 1 1 insignificant -0.036266 0.069096 lowCoverage 1 lowCoverage 0.90514 0.74423 0.17996 6 0.90226 0.71713 0.18513 1.0122e-05 0.99776 weaklyHypermeth 7.0474e-04 1 weaklyHypermeth 1.7416e-03 0.99997 weaklyHypermeth 1.9352e-01 1 insignificant 0.145845 0.0200886 weaklyHypermeth 1.0000 insignificant 0.90514 0.91933 -0.015544 5 0.90226 0.93162 -0.02935706 0.89197 0.181466 insignificant 1 1 insignificant 0.833474 0.5553340 insignificant 1 1 insignificant -0.03406108 0.207892 insignificant 1 insignificant 0.74423 0.91933 -0.17262 5 0.71713 0.93162 -0.21448 0.99529 5.2224e-04 weaklyHypometh 1 4.3520e-02 weaklyHypometh 0.99744 8.3510e-03 weaklyHypometh 1 9.2788e-01 insignificant -0.179907 0.0085267 weaklyHypometh 1.00000 insignificant chrX 106888931 106889931 161941 TSC22D3 ENSG00000157514 0.81163 184 6 0.70792 83 6 0.69451 76 4 0.84218 102 6 0.81361 59 6 0.89242 119 6 0.75563 93 6 0.61348 90 6 0.82330 49 6 0.88657 56 4 0.80897 147 6 0.48333 16 2 0.68151 63 4 0.83333 21 3 0.53864 26 3 0.95833 17 2 0.56250 16 1 0.63625 126 6 0.76360 126 6 0.73972 121 6 0.88889 19 1 0.93056 26 1 0.67140 38 3 0.70119 40 4 0.85511 129 6 0.80605 143 6 0.85946 45 4 1.00000 31 4 0.85931 107 6 0.90349 82 6 0.62874 153 6 0.85938 124 6 0.62166 76 6 0.33290 126 6 0.20979 133 5 0.27778 10 1 0.61448 40 3 0.72621 162 6 0.87132 171 6 0.73378 115 6 0.63797 193 6 0.71792 151 6 0.63140 101 6 0.79647 0.72495 0.69885 0.78635 0.81402 0.88462 0.69226 0.79268 0.76052 0.88483 0.81952 0.58786 0.82413 0.86394 0.84671 0.94231 NA 0.75318 0.71086 0.86635 0.88718 0.87266 0.80363 0.59205 0.83242 0.78253 0.82323 0.91821 0.84036 0.88820 0.74743 0.81921 0.66297 0.42245 0.48580 0.45212 0.63714 0.79965 0.83781 0.75814 0.74704 0.69840 0.82597 1 0.81463 0.83458 -0.0158519 6 0.62338 0.70998 -0.086598 0.92189 0.140614 insignificant 1 1 insignificant 0.99717 0.106919 insignificant 1 1 insignificant -0.0879261 0.04941 lowCoverage 1 lowCoverage 0.81709 0.50274 0.301815 6 0.79784 0.48947 0.308365 1.3822e-12 1.00000 hypermethylated 2.7644e-10 1 hypermethylated 2.0941e-04 0.99999 hypermethylated 3.4902e-02 1 hypermethylated 0.278569 0.0233356 lowCoverage 1.00000 lowCoverage 0.81411 0.79070 0.0262461 6 0.55411 0.58046 -0.0263441 0.34907 0.719342 insignificant 1 1 insignificant 0.32097 0.8921934 insignificant 1 1 insignificant 0.023893 0.657386 lowCoverage 1 lowCoverage 0.83584 0.50274 0.31081 6 0.82163 0.48947 0.33216 2.9359e-09 1.00000 hypermethylated 7.3397e-07 1 hypermethylated 1.5288e-05 1.00000 hypermethylated 3.8219e-03 1 hypermethylated 0.366495 0.0070458 lowCoverage 1.0000 lowCoverage 0.83458 0.79178 0.045526 6 0.70998 0.65301 0.05696079 0.18366 0.966282 insignificant 1 1 insignificant 0.011321 0.9981354 weaklyHypermeth 1 1 insignificant 0.11181909 0.069120 lowCoverage 1 lowCoverage 0.50274 0.79367 -0.28773 6 0.48947 0.78735 -0.29788 0.99999 9.7251e-05 hypomethylated 1 1.3893e-02 hypomethylated 0.99891 9.9107e-03 weaklyHypometh 1 9.6849e-01 insignificant -0.254676 0.0349252 lowCoverage 1.00000 lowCoverage chrX 111421462 111422462 162342 TRPC5 ENSG00000072315 0.56715 320 5 0.70569 131 5 0.46281 47 3 0.75789 135 5 0.77607 59 5 0.73370 173 5 0.70938 112 6 0.59957 90 5 0.70238 50 3 0.90561 35 3 0.74395 188 5 0.67949 33 3 0.79810 50 5 0.73810 51 5 0.74411 38 3 0.53333 17 1 0.66667 246 1 0.73751 305 5 0.79222 122 5 0.62068 211 5 0.65000 32 3 0.80000 8 0 0.70909 101 6 0.71510 39 5 0.91111 52 3 0.69741 182 5 0.79184 40 3 0.88889 18 1 0.65989 120 5 0.70165 118 5 0.73070 187 5 0.69926 157 5 0.48542 104 5 0.65913 80 5 0.63997 63 7 0.33333 3 0 0.62143 80 4 0.56615 147 5 0.79507 251 3 0.66950 164 5 0.65201 338 5 0.48431 207 5 0.78295 158 5 0.87242 0.77736 0.62062 0.86622 0.79620 0.84597 0.83528 0.82479 0.87286 0.87592 0.86826 0.85503 0.88850 0.90690 0.85778 0.68205 0.88640 0.85718 0.85923 0.85957 0.85897 0.93590 0.86674 0.75996 0.96581 0.85653 0.86227 0.85110 0.89000 0.86803 0.84235 0.86552 0.69199 0.70007 0.83262 0.80052 0.76374 0.83965 0.88294 0.86358 0.85909 0.82749 0.88693 1 0.83299 0.82146 0.0011081 5 0.70333 0.76009 -0.056760 0.74788 0.24014 insignificant 1 1 insignificant 0.90668 0.25645 insignificant 1 1 insignificant -0.047526 0.165754 lowCoverage 1 lowCoverage 0.83396 0.70440 0.100039 5 0.68278 0.54703 0.135747 2.8843e-05 0.99971 weaklyHypermeth 0.0046909 1 weaklyHypermeth 0.0036932 0.99847 weaklyHypermeth 0.61554 1 insignificant 0.147814 0.031389 lowCoverage 1 lowCoverage 0.83299 0.86225 -0.0012989 5 0.70333 0.59021 0.113118 0.67186 0.93242 insignificant 1 1 insignificant 0.46180 0.81638 insignificant 1 1 insignificant 0.021950 0.730777 lowCoverage 1 lowCoverage 0.82122 0.70440 0.093428 5 0.70264 0.54703 0.155610 4.5804e-04 0.99867 weaklyHypermeth 0.0416398 1 weaklyHypermeth 0.0023825 0.99610 weaklyHypermeth 0.39709 1 insignificant 0.195339 0.0093104 lowCoverage 1 lowCoverage 0.82146 0.86225 0.0084086 5 0.76009 0.59021 0.1698781 0.80681 0.99657 insignificant 1 1 insignificant 0.34786 0.99985 insignificant 1 1 insignificant 0.0694759 0.302517 lowCoverage 1 lowCoverage 0.70440 0.86343 -0.093486 5 0.54703 0.63532 -0.0882927 0.99632 0.02195326 weaklyHypometh 1 1.00000 insignificant 0.99830 0.0740679 insignificant 1 1.00000 insignificant -0.125864 0.131381 lowCoverage 1 lowCoverage chrX 114764460 114765460 162506 PLS3 ENSG00000102024 0.82632 112 5 0.68384 82 5 0.67556 37 5 0.76667 50 5 0.66204 36 3 0.81836 128 5 0.66389 30 3 0.76539 88 5 0.64000 39 5 0.86000 48 5 0.76274 96 5 0.60000 11 0 0.75542 101 5 0.86000 19 2 0.79286 29 3 NA 0 0 0.80000 11 0 0.79246 81 5 0.78156 75 5 0.80675 135 5 0.52381 19 1 0.95000 17 2 0.78182 42 4 0.59286 26 3 0.67500 25 2 0.77004 146 5 0.45192 47 2 0.50000 8 0 0.86662 84 5 0.80633 117 5 0.73988 159 5 0.82560 141 5 0.66234 58 5 0.54955 62 5 0.73542 97 5 0.66667 7 0 0.68500 33 4 0.72215 125 5 0.74524 54 5 0.84310 103 5 0.75221 78 5 0.76667 54 5 0.83529 73 5 0.91136 0.76356 0.73392 0.84717 0.84064 0.90046 0.69846 0.84526 0.82105 0.87281 0.80811 0.81579 0.85607 0.90789 0.87406 NA 0.97368 0.83194 0.88070 0.89422 0.85088 0.85021 0.89952 0.89868 0.80263 0.84889 0.59404 0.69627 0.92567 0.87784 0.82130 0.84534 0.78577 0.69622 0.84175 0.69428 0.81250 0.79538 0.81986 0.91843 0.80863 0.89254 0.92415 0 0.78477 0.79298 -0.0018484 5 0.64614 0.68122 -0.035079 0.47147 0.44343 insignificant 1 1 insignificant 0.77574 0.75359 insignificant 1 1 insignificant 0.046370 0.358459 lowCoverage 1 lowCoverage 0.78542 0.67539 0.093231 5 0.77537 0.68181 0.093554 1.3098e-04 0.98534 weaklyHypermeth 0.0145528 1 weaklyHypermeth 0.0088035 0.99790 weaklyHypermeth 0.98345 1 insignificant 0.083170 0.027875 lowCoverage 1 lowCoverage 0.78542 0.76519 -0.0176352 5 0.77537 0.79358 -0.018209 0.87425 0.31653 insignificant 1 1 insignificant 0.87191 0.38683 insignificant 1 1 insignificant -0.035142 0.227154 lowCoverage 1 lowCoverage 0.79659 0.67539 0.096598 5 0.77746 0.68181 0.095649 3.7170e-05 0.69294 weaklyHypermeth 0.0074339 1 weaklyHypermeth 0.0201640 0.96607 weaklyHypermeth 1.00000 1 insignificant 0.036800 0.4974318 lowCoverage 1 lowCoverage 0.79659 0.76519 -0.0145389 5 0.77746 0.79358 -0.0161138 0.90394 0.17427 insignificant 1 1 insignificant 0.97068 0.19849 insignificant 1 1 insignificant -0.0815118 0.126302 lowCoverage 1 lowCoverage 0.67539 0.76519 -0.110805 5 0.68181 0.79358 -0.1117624 0.98081 0.00059680 weaklyHypometh 1 0.23983 insignificant 0.99943 0.0040149 weaklyHypometh 1 1.00000 insignificant -0.118312 0.007343 lowCoverage 1 lowCoverage chrX 116625236 116626236 162580 ENSG00000218912 0.78009 142 5 0.88111 51 5 0.59657 69 5 0.81517 72 5 0.82381 33 5 0.84320 155 5 0.59469 51 5 0.68590 43 3 0.89560 51 4 0.83332 48 5 0.79848 90 5 0.81457 74 5 0.72063 38 4 NA 0 0 0.80278 49 5 0.85000 38 5 0.75524 32 5 0.81323 86 5 0.78988 90 5 0.85169 120 5 0.92667 18 3 0.76000 30 4 0.80403 105 5 0.68889 35 3 0.86667 36 4 0.77026 75 5 0.68182 32 3 0.63214 24 3 0.70949 69 3 0.82310 90 5 0.75718 92 5 0.75137 223 5 0.59295 59 5 0.70718 79 5 0.68607 77 5 0.80667 38 4 0.73444 36 3 0.70558 73 5 0.80380 129 5 0.81793 163 5 0.78244 145 5 0.84974 146 5 0.81334 147 5 0.81059 0.85356 0.55002 0.86217 0.80806 0.80627 0.65998 0.72104 0.88023 0.78799 0.88120 0.78650 0.73782 NA 0.78431 0.90746 0.80923 0.82946 0.83133 0.86328 0.89327 0.69749 0.85161 0.73782 0.88402 0.82934 0.69130 0.70974 0.80603 0.84945 0.80210 0.72513 0.63696 0.73995 0.69247 0.71374 0.68981 0.75632 0.85307 0.82518 0.79361 0.87540 0.82029 3 0.78979 0.78649 0.0051044 5 0.78377 0.77931 0.004457 0.50479 0.63639 insignificant 1 1 insignificant 0.53233 0.70552 insignificant 1 1 insignificant 0.022329 0.473621 lowCoverage 1 lowCoverage 0.78979 0.70718 0.086757 5 0.78377 0.70142 0.082346 8.4501e-04 0.97554 weaklyHypermeth 0.0650009 1 weaklyHypermeth 0.0012596 0.91337 weaklyHypermeth 0.31489 1 insignificant 0.081147 0.039280 lowCoverage 1 lowCoverage 0.78979 0.81233 -0.0310507 5 0.78377 0.81403 -0.030260 0.95059 0.20787 insignificant 1 1 insignificant 0.87084 0.36204 insignificant 1 1 insignificant -0.026821 0.239290 lowCoverage 1 lowCoverage 0.78649 0.70718 0.081430 5 0.77931 0.70142 0.077889 4.1735e-03 0.97617 weaklyHypermeth 0.2196589 1 insignificant 0.0152474 0.87687 weaklyHypermeth 1.00000 1 insignificant 0.058818 0.1386840 lowCoverage 1 lowCoverage 0.78649 0.81233 -0.0368531 5 0.77931 0.81403 -0.0347173 0.97385 0.18325 insignificant 1 1 insignificant 0.93688 0.37529 insignificant 1 1 insignificant -0.0491507 0.081558 lowCoverage 1 lowCoverage 0.70718 0.81233 -0.118392 5 0.70142 0.81403 -0.1126060 0.99541 0.00071948 weaklyHypometh 1 0.23983 insignificant 0.99162 0.0012624 weaklyHypometh 1 0.82279 insignificant -0.107968 0.010746 lowCoverage 1 lowCoverage chrX 120129456 120130456 162728 GLUD2 ENSG00000182890 0.63405 151 3 0.61337 110 6 0.50821 109 6 0.57041 80 6 0.67500 28 3 0.55984 213 6 0.51562 78 6 0.59030 114 6 0.37584 65 3 0.79630 42 2 0.60303 189 6 0.75000 13 1 0.67472 127 6 0.83333 25 2 0.74458 47 3 0.45370 24 2 0.46364 26 2 0.79899 112 6 0.65865 216 6 0.71538 207 6 0.72653 41 6 0.72917 43 4 0.68230 93 6 0.61068 68 6 0.71726 28 2 0.59479 205 6 0.62025 55 3 0.73611 24 2 0.66996 102 6 0.59806 141 6 0.74010 162 6 0.67902 290 6 0.58464 79 6 0.49681 86 6 0.68647 174 6 0.34805 37 2 0.60288 58 6 0.60594 170 6 0.60297 176 6 0.75242 103 6 0.64168 150 6 0.78713 114 3 0.60800 91 6 0.65771 0.62020 0.47053 0.53417 0.81476 0.62396 0.73476 0.64119 0.37783 0.80529 0.71965 0.66764 0.67585 0.74472 0.73944 0.62145 0.62212 0.80299 0.67762 0.68501 0.59583 0.79286 0.78030 0.66344 0.67874 0.69811 0.67481 0.75434 0.68100 0.63653 0.63534 0.64049 0.56680 0.48968 0.67838 0.38637 0.61091 0.61922 0.67429 0.74471 0.67195 0.63942 0.61371 2 0.70547 0.71406 -0.0148010 6 0.52468 0.61425 -0.089563 0.97017 0.27477 insignificant 1 1 insignificant 0.94850 0.19428 insignificant 1 1 insignificant -0.048603 0.145115 lowCoverage 1 lowCoverage 0.70547 0.63576 0.065460 6 0.52468 0.57654 -0.051860 2.0590e-01 0.99495 insignificant 1.0000000 1 insignificant 0.0982257 0.99702 insignificant 1.00000 1 insignificant 0.072618 0.225243 lowCoverage 1 lowCoverage 0.70639 0.73659 -0.0234342 6 0.56392 0.65696 -0.093040 0.95088 0.43527 insignificant 1 1 insignificant 0.79265 0.63005 insignificant 1 1 insignificant -0.051692 0.304642 lowCoverage 1 lowCoverage 0.71406 0.63576 0.081278 6 0.61425 0.57654 0.037702 3.4106e-02 0.98392 weaklyHypermeth 1.0000000 1 insignificant 0.0112586 0.99889 weaklyHypermeth 0.93821 1 insignificant 0.121222 0.0528792 lowCoverage 1 lowCoverage 0.71589 0.73659 -0.0074373 6 0.65438 0.65696 -0.0025875 0.72924 0.62730 insignificant 1 1 insignificant 0.51796 0.86621 insignificant 1 1 insignificant -0.0030889 0.943412 lowCoverage 1 lowCoverage 0.63682 0.73659 -0.088143 6 0.65891 0.65696 0.0019432 0.97977 0.10126959 insignificant 1 1.00000 insignificant 0.99719 0.0836939 insignificant 1 1.00000 insignificant -0.124310 0.074085 insignificant 1 insignificant chrX 121707949 121708949 162793 ENSG00000217270 0.57045 112 5 0.36957 45 2 0.45583 79 5 0.60242 75 5 0.48500 35 5 0.56324 279 5 0.52637 95 5 0.55056 79 5 0.57560 88 5 0.62222 93 5 0.58145 107 5 0.45495 47 5 0.53356 82 5 NA 0 0 0.58876 92 5 0.56364 51 5 0.50381 68 5 0.54423 97 5 0.59268 136 5 0.59117 215 5 0.61667 23 2 0.52738 76 5 0.55031 76 5 0.48377 47 5 0.68333 48 5 0.58848 129 5 0.63983 42 5 0.55475 49 5 0.58845 69 5 0.58074 183 5 0.55939 211 5 0.57049 262 5 0.47826 45 2 0.55035 121 5 0.50621 72 5 0.47606 52 5 0.58889 49 5 0.53976 174 5 0.61011 128 5 0.60049 166 5 0.58965 149 5 0.57128 165 5 0.54503 132 5 0.59132 0.53701 0.47255 0.61701 0.50574 0.58428 0.54974 0.56977 0.59371 0.64180 0.59792 0.47912 0.54653 NA 0.61036 0.58128 0.52560 0.56279 0.60924 0.60853 0.63873 0.54788 0.57071 0.50109 0.70343 0.61031 0.65847 0.57339 0.60881 0.60056 0.57406 0.59182 0.56834 0.56371 0.52123 0.49749 0.60359 0.55625 0.62798 0.62016 0.60692 0.58888 0.56539 5 0.56747 0.59012 -0.0113079 5 0.56163 0.57264 -0.011011 0.93137 0.15247 insignificant 1 1 insignificant 0.95889 0.22371 insignificant 1 1 insignificant -0.037815 0.080936 lowCoverage 1 lowCoverage 0.56747 0.55166 0.022325 5 0.56163 0.53981 0.021825 1.5983e-02 0.46034 weaklyHypermeth 0.6748747 1 insignificant 0.1244883 0.46942 insignificant 1.00000 1 insignificant 0.017561 0.463387 lowCoverage 1 lowCoverage 0.56747 0.56622 -0.0241395 5 0.56163 0.58500 -0.023371 0.72849 0.18409 insignificant 1 1 insignificant 0.75202 0.13121 insignificant 1 1 insignificant -0.042495 0.034526 lowCoverage 1 lowCoverage 0.59012 0.55166 0.033233 5 0.57264 0.53981 0.032836 4.5279e-02 0.73432 weaklyHypermeth 1.0000000 1 insignificant 0.0736818 0.78803 insignificant 1.00000 1 insignificant 0.055376 0.0370344 lowCoverage 1 lowCoverage 0.59012 0.56622 -0.0130501 5 0.57264 0.58500 -0.0123597 0.55178 0.23775 insignificant 1 1 insignificant 0.51672 0.38854 insignificant 1 1 insignificant -0.0046792 0.808431 lowCoverage 1 lowCoverage 0.55166 0.56622 -0.046429 5 0.53981 0.58500 -0.0451961 0.88441 0.07053303 insignificant 1 1.00000 insignificant 0.88624 0.1945538 insignificant 1 1.00000 insignificant -0.060055 0.022847 lowCoverage 1 lowCoverage chrX 125433008 125434008 163297 ENSG00000217304 0.63513 578 6 0.680697 1074 5 0.50222 403 5 0.69682 318 6 0.394036 313 3 0.467229 2341 7 0.490476 359 5 0.56411 775 5 0.57743 626 5 0.52523 803 5 0.66109 700 5 0.5334416 128 4 0.70944 358 5 0.199564 290 2 0.5802241 491 5 0.166667 84 1 0.484244 170 5 0.72677 527 7 0.410015 2036 6 0.62341 811 6 0.66058 70 5 0.5838891 141 5 0.55587 1551 6 0.466462 383 5 0.73226 74 5 0.42322 7063 8 0.45647 388 5 0.519224 254 4 0.71151 1085 5 0.500615 6143 8 0.51397 9828 8 0.43173 1656 6 0.37803 511 5 0.46222 135 5 0.27561 14093 7 0.42356 57 5 0.34430 868 4 0.56628 3478 6 0.69674 751 6 0.463560 1932 6 0.531464 440 6 0.62702 459 5 0.44705 809 6 0.38188 0.2528952 0.20282 0.3919688 0.193273 0.23097 0.216064 0.19764 0.20236 0.17460 0.23959 0.246284 0.321608 0.19725 0.254216 0.105467 0.148166 0.336157 0.232516 0.30904 0.283764 0.293164 0.267456 0.1962281 0.46084 0.24658 0.14781 0.19677 0.28938 0.239700 0.22474 0.276377 0.16320 0.23064 0.18081 0.27011 0.12901 0.25691 0.41301 0.292743 0.663487 0.40591 0.254452 3 0.14812 0.051928 0.01565668 6 0.49876 0.40951 0.0892551 0.64712 0.836038 insignificant 1 1 insignificant 0.96069 0.810554 insignificant 1 1 insignificant -0.0149042 0.74777 lowCoverage 1 lowCoverage 0.14782 0.039756 0.035552 6 0.41506 0.34295 0.072105 1.6704e-05 9.5237e-01 weaklyHypermeth 0.00185602 1.00000000 weaklyHypermeth 6.3868e-02 0.9595479 insignificant 1.00000000 1 insignificant 0.12307791 0.03909871 lowCoverage 1.00000 lowCoverage 0.14787 0.25712 -0.085885 6 0.46118 0.50565 -0.044475 9.9474e-01 0.019120 weaklyHypometh 1.0000e+00 1 insignificant 9.9668e-01 0.0035751 weaklyHypometh 1.00000000 1 insignificant -0.021754 0.720649 lowCoverage 1 lowCoverage 0.051834 0.039756 0.0067118 6 0.41569 0.34295 0.0727399 3.1502e-04 0.042485 weaklyHypermeth 3.1502e-02 1 weaklyHypermeth 6.0643e-02 0.865817 insignificant 1.0000000 1 insignificant 0.137982 0.02153312 weaklyHypermeth 1.00000 insignificant 0.051843 0.25712 -0.081217 6 0.46188 0.50565 -0.043769 9.8691e-01 0.016624 weaklyHypometh 1.0000e+00 1 insignificant 9.8177e-01 0.010626 weaklyHypometh 1.00000000 1 insignificant -0.006850 0.9071507 insignificant 1 insignificant 0.03976 0.25712 -0.097816 6 0.38106 0.50565 -0.12459 9.9287e-01 1.6076e-04 weaklyHypometh 1.00000 0.05358550 weaklyHypometh 0.9398419 1.2855e-03 weaklyHypometh 1 0.4284905 insignificant -0.144832 0.04930327 weaklyHypometh 1.00000 insignificant chrX 127766338 127767338 163406 ENSG00000218728 0.79958 137 5 0.846154 26 2 0.85484 62 2 0.75306 79 7 0.944444 18 2 0.694193 196 6 0.979167 48 2 0.73889 19 2 0.79667 49 2 1.00000 17 2 0.89605 39 2 0.8571429 14 2 0.87105 39 2 NA 0 0 0.9545455 22 2 1.000000 13 2 0.717098 544 6 0.62563 63 6 0.921053 38 2 0.85170 138 6 1.00000 22 2 0.7333333 11 2 0.75310 58 2 0.714286 14 2 0.91667 14 2 0.94000 50 2 0.80714 63 2 0.933333 32 2 0.88889 18 2 0.923077 24 2 0.88834 45 2 0.84939 200 6 1.00000 16 2 0.72727 22 2 0.75000 16 2 0.89899 20 2 0.77273 55 2 0.92976 56 2 0.79096 194 7 0.755678 106 6 0.716884 154 7 0.84191 141 5 0.76854 138 7 0.86324 0.8518944 0.86086 0.9731343 0.940299 0.88737 0.980721 0.73599 0.79393 1.00000 0.90008 0.857143 0.873213 NA 0.951153 1.000000 0.923881 0.934558 0.923016 0.86975 1.000000 0.738308 0.803866 0.7142857 0.92289 0.94149 0.80874 0.93831 0.88889 0.917336 0.89018 0.913833 1.00000 0.72727 0.76866 0.89974 0.77612 0.92728 0.96733 0.938308 0.900443 0.95797 0.896020 2 0.79038 0.865699 -0.00065691 2 0.74995 0.83582 -0.0858724 0.62075 0.090454 lowCoverage 1 1 lowCoverage 0.67609 0.560927 lowCoverage 1 1 lowCoverage -0.0148604 0.68411 lowCoverage 1 lowCoverage 0.89758 0.848649 0.043779 2 0.88933 0.84676 0.042565 5.2081e-02 9.4608e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 1.7868e-01 0.9241493 lowCoverage 1.00000000 1 lowCoverage 0.00097748 0.98539829 lowCoverage 1.00000 lowCoverage 0.79038 0.83220 -0.036307 6 0.74995 0.77014 -0.020190 4.7883e-01 0.175714 insignificant 1.0000e+00 1 insignificant 3.9172e-01 0.6437433 insignificant 1.00000000 1 insignificant 0.072642 0.038121 lowCoverage 1 lowCoverage 0.884937 0.848649 0.0363132 2 0.88370 0.84676 0.0369386 1.9921e-01 0.908229 lowCoverage 1.0000e+00 1 lowCoverage 5.2487e-01 0.701838 lowCoverage 1.0000000 1 lowCoverage 0.015838 0.77068157 lowCoverage 1.00000 lowCoverage 0.865699 0.83220 -0.041651 2 0.83582 0.77014 0.065682 1.3421e-01 0.157295 lowCoverage 1.0000e+00 1 lowCoverage 5.2053e-01 0.370058 lowCoverage 1.00000000 1 lowCoverage 0.087502 0.0203795 lowCoverage 1 lowCoverage 0.84865 0.94207 -0.091839 2 0.84676 0.93959 -0.09283 9.8870e-01 3.0156e-02 lowCoverage 1.00000 1.00000000 lowCoverage 0.9225127 2.5002e-01 lowCoverage 1 1.0000000 lowCoverage 0.071665 0.19549165 lowCoverage 1.00000 lowCoverage chrX 128003763 128004763 163456 ENSG00000220383 0.87539 276 6 0.823864 70 6 0.49183 163 6 0.94432 160 6 0.831728 112 6 0.949935 144 6 0.891272 145 6 0.87030 124 6 0.74753 172 6 0.93527 147 6 0.86327 207 6 0.7576720 38 4 0.91549 183 6 1.000000 25 3 0.8173764 87 6 0.800000 20 1 0.695933 37 3 0.86105 163 6 0.945722 56 4 0.81214 204 6 0.93056 45 3 0.8961071 120 6 0.85191 88 5 0.848509 90 6 0.75397 59 6 0.85939 184 6 0.71805 101 6 0.853989 80 5 0.78102 142 6 0.955357 83 4 0.75829 176 6 0.92163 293 6 0.57377 61 6 0.51989 91 6 0.66667 61 3 0.60556 42 2 0.58135 54 4 0.74083 166 6 0.86730 271 6 0.893964 125 6 0.900818 237 6 0.84436 222 6 0.87981 127 4 0.90591 0.8894893 0.57736 0.9509479 0.911189 0.95229 0.883833 0.90957 0.83628 0.92472 0.87193 0.847641 0.934200 0.99122 0.856300 0.918282 0.794331 0.886222 0.915655 0.84735 0.909674 0.908680 0.887113 0.8832361 0.89308 0.84809 0.80708 0.91265 0.81370 0.941250 0.79038 0.920208 0.62742 0.63206 0.70163 0.71096 0.74379 0.82127 0.93338 0.917634 0.928796 0.89335 0.949106 3 0.86735 0.867899 -0.00503457 6 0.86110 0.83792 0.0231787 0.73694 0.652423 insignificant 1 1 insignificant 0.35019 0.940811 insignificant 1 1 insignificant -0.0025607 0.93955 insignificant 1 insignificant 0.86730 0.688421 0.178196 6 0.83795 0.62990 0.208053 1.1706e-07 9.9999e-01 weaklyHypermeth 0.00001951 1.00000000 weaklyHypermeth 1.8667e-06 0.9999272 weaklyHypermeth 0.00093335 1 weaklyHypermeth 0.22682777 0.00012036 lowCoverage 0.12036 lowCoverage 0.86730 0.90937 -0.043426 6 0.83795 0.88119 -0.043238 9.8008e-01 0.027207 weaklyHypometh 1.0000e+00 1 insignificant 9.3161e-01 0.0834083 insignificant 1.00000000 1 insignificant -0.035746 0.200357 insignificant 1 insignificant 0.868222 0.688421 0.1823882 6 0.85258 0.62990 0.2226777 3.5253e-08 0.999903 weaklyHypermeth 1.7627e-05 1 weaklyHypermeth 2.0301e-06 0.999951 weaklyHypermeth 0.0020301 1 weaklyHypermeth 0.229388 0.00015295 lowCoverage 0.15295 lowCoverage 0.868222 0.90937 -0.036834 6 0.85258 0.88119 -0.028613 8.1888e-01 0.021331 weaklyHypometh 1.0000e+00 1 insignificant 8.2698e-01 0.066256 insignificant 1.00000000 1 insignificant -0.033185 0.1923735 insignificant 1 insignificant 0.68842 0.90937 -0.228140 6 0.62990 0.88119 -0.25129 1.0000e+00 3.4236e-07 hypomethylated 1.00000 0.00034236 hypomethylated 0.9999998 3.9285e-06 hypomethylated 1 0.0039285 hypomethylated -0.262574 0.00023024 lowCoverage 0.23024 lowCoverage chrX 128595874 128596874 163535 ENSG00000214977 0.61721 294 5 0.483020 277 5 0.34354 119 5 0.42191 94 5 0.692247 81 5 0.667560 227 5 0.509020 129 5 0.67584 110 5 0.74049 101 3 0.39376 47 3 0.59252 373 5 0.4266667 17 2 0.19595 132 5 0.514603 35 3 0.4687002 68 3 0.400000 9 1 0.000000 2 0 0.65034 143 3 0.416413 181 5 0.58435 325 5 0.37143 26 3 0.0958333 47 2 0.57258 81 5 0.508822 112 5 0.88571 29 3 0.58797 415 5 0.81667 56 5 0.929960 54 3 0.60786 197 3 0.415104 276 5 0.44689 469 5 0.57906 385 5 0.39186 124 5 0.45889 96 5 0.31014 502 4 0.16667 4 0 0.37568 133 5 0.45538 380 5 0.19592 600 5 0.069494 212 5 0.179656 285 5 0.53461 160 3 0.13969 217 5 0.72256 0.6947253 0.51408 0.5604812 0.689892 0.68173 0.592157 0.70040 0.66214 0.58408 0.74232 0.489855 0.276915 0.51498 0.466559 0.382314 0.047725 0.537781 0.633168 0.67422 0.739130 0.117935 0.783076 0.7111697 0.85217 0.70314 0.65580 0.83489 0.79525 0.528702 0.56016 0.667598 0.44994 0.53647 0.57493 0.23082 0.46211 0.53113 0.25196 0.043302 0.233244 0.52201 0.166086 1 0.58936 0.583605 -0.00549808 5 0.53684 0.53153 0.0053154 0.67431 0.738568 insignificant 1 1 insignificant 0.94738 0.093661 insignificant 1 1 insignificant -0.0784499 0.32977 lowCoverage 1 lowCoverage 0.58936 0.432607 0.115204 5 0.53684 0.38549 0.151351 1.0943e-04 9.9988e-01 weaklyHypermeth 0.00841741 1.00000000 weaklyHypermeth 5.3240e-03 0.9984668 weaklyHypermeth 0.48399899 1 insignificant 0.12993725 0.04848574 lowCoverage 1.00000 lowCoverage 0.58936 0.18453 0.363353 5 0.53684 0.20540 0.331445 2.0823e-14 1.000000 hypermethylated 2.0823e-11 1 hypermethylated 8.9077e-07 0.9999998 hypermethylated 0.00089077 1 hypermethylated 0.265834 0.024908 lowCoverage 1 lowCoverage 0.583605 0.432607 0.1232581 5 0.53153 0.38549 0.1460360 5.3776e-04 0.999861 weaklyHypermeth 4.8888e-02 1 weaklyHypermeth 1.6187e-03 0.998764 weaklyHypermeth 0.3783147 1 insignificant 0.208387 0.02026150 lowCoverage 1.00000 lowCoverage 0.583605 0.18453 0.367864 5 0.53153 0.20540 0.326129 4.7152e-11 1.000000 hypermethylated 4.7152e-08 1 hypermethylated 2.6702e-07 1.000000 hypermethylated 0.00026702 1 hypermethylated 0.344284 0.0085886 lowCoverage 1 lowCoverage 0.43261 0.18453 0.244877 5 0.38549 0.20540 0.18009 5.9925e-05 9.9934e-01 hypermethylated 0.04092 1.00000000 hypermethylated 0.0012843 9.9998e-01 weaklyHypermeth 1 1.0000000 insignificant 0.135897 0.18845167 lowCoverage 1.00000 lowCoverage chrX 128922602 128923602 163560 UTP14A ENSG00000156697 0.40093 148 5 0.050466 155 8 0.10243 197 10 0.15556 101 5 0.065867 234 10 0.075902 108 7 0.057983 318 10 0.39396 211 10 0.26847 123 5 0.16256 112 5 0.26459 353 10 0.0075758 47 4 0.25000 112 5 0.072222 57 4 0.0047619 92 4 0.074074 47 4 0.083333 6 0 0.11012 124 5 0.086364 290 7 0.40888 138 7 0.10909 47 3 0.0092593 42 2 0.20049 67 7 0.015497 181 11 0.56817 238 9 0.35974 320 10 0.18719 194 10 0.091228 61 5 0.27266 188 7 0.065391 225 8 0.37223 367 10 0.11680 193 7 0.32502 114 7 0.46058 176 9 0.26989 162 5 0.28989 81 5 0.32117 102 8 0.37885 342 10 0.37918 200 7 0.115152 109 6 0.042515 174 5 0.24524 77 5 0.06536 98 6 0.26709 0.0086001 0.10556 0.0065934 0.065573 0.07130 0.032237 0.27547 0.14385 0.10040 0.21028 0.046845 0.040293 0.06166 0.015960 0.034691 NA 0.028912 0.036842 0.31426 0.073626 0.017035 0.025657 0.0058415 0.13160 0.17394 0.21468 0.16339 0.40527 0.022502 0.31728 0.046544 0.21577 0.36959 0.53089 0.26636 0.38439 0.37889 0.17496 0.019780 0.019715 0.29238 0.053335 4 0.14305 0.207823 -0.06341389 6 0.19591 0.22560 -0.0296840 1.00000 0.032622 weaklyHypometh 1 1 insignificant 0.99990 0.723701 insignificant 1 1 insignificant -0.0425098 0.46234 insignificant 1 insignificant 0.14300 0.419487 -0.221465 6 0.18503 0.26288 -0.077854 1.0000e+00 2.1699e-07 hypomethylated 1.00000000 0.00021699 hypomethylated 9.9999e-01 0.0017333 weaklyHypometh 1.00000000 1 insignificant -0.18609911 0.00029165 weaklyHypometh 0.14582 insignificant 0.14305 0.15046 0.010347 5 0.18870 0.20137 -0.012670 9.4213e-01 0.929769 insignificant 1.0000e+00 1 insignificant 9.1675e-01 0.9397926 insignificant 1.00000000 1 insignificant -0.014688 0.839831 insignificant 1 insignificant 0.208294 0.420513 -0.1626398 6 0.28442 0.27834 0.0060744 9.9997e-01 0.063538 insignificant 1.0000e+00 1 insignificant 9.9897e-01 0.081007 insignificant 1.0000000 1 insignificant -0.143589 0.02145418 weaklyHypometh 1.00000 insignificant 0.208412 0.15046 0.076431 5 0.25567 0.20137 0.054306 2.8303e-01 0.999995 insignificant 1.0000e+00 1 insignificant 6.8677e-01 0.999193 insignificant 1.00000000 1 insignificant 0.027822 0.7348575 insignificant 1 insignificant 0.42062 0.14916 0.253377 5 0.26656 0.14432 0.12224 1.5336e-03 9.9968e-01 weaklyHypermeth 0.51119 1.00000000 insignificant 0.0472531 9.9921e-01 weaklyHypermeth 1 1.0000000 insignificant 0.171412 0.05081498 insignificant 1.00000 insignificant chrX 132810843 132811843 164061 ENSG00000219153 0.83811 213 6 0.63291 45 5 0.69980 116 6 0.77986 123 6 0.85000 35 6 0.77368 174 6 0.752763 90 6 0.78440 51 5 0.69735 78 6 0.787879 59 6 0.82013 149 6 0.66006 83 6 0.741288 71 6 NA 0 0 0.85673 75 6 0.796261 67 5 0.6712843 70 6 0.79448 116 6 0.77351 89 6 0.83852 142 6 0.61944 25 2 0.82910 41 6 0.77764 123 6 0.84722 39 4 0.79563 49 6 0.79312 119 6 0.77738 40 4 0.75000 41 3 0.64269 64 6 0.86477 123 6 0.81131 96 6 0.748632 192 6 0.70020 95 6 0.73380 88 6 0.70277 111 6 0.69474 72 6 0.69466 58 6 0.73616 142 6 0.80973 264 6 0.85527 177 6 0.82937 163 6 0.79337 212 6 0.83281 185 6 0.85366 0.663156 0.706282 0.79436 0.84519 0.78497 0.7711803 0.78921 0.71718 0.819768 0.83350 0.6859223 0.780842 NA 0.8662328 0.814481 0.701072 0.81602 0.79355 0.84605 0.65213 0.84685 0.784156 0.86018 0.80485 0.80943 0.76390 0.76622 0.65814 0.866870 0.81689 0.754697 0.71890 0.74254 0.700239 0.71766 0.72082 0.74987 0.824063 0.87165 0.848393 0.81183 0.8502362 4 0.77140 0.78676 -0.0074881 6 0.76939 0.77964 -0.0102542 0.52480 0.10065144 insignificant 1 1.00000 insignificant 0.77305 0.2233021 insignificant 1 1 insignificant -0.0056746 0.831629 insignificant 1 insignificant 0.77140 0.71378 0.057960 6 0.76939 0.71100 0.0583880 9.3699e-03 0.99852 weaklyHypermeth 4.2591e-01 1 insignificant 2.3270e-02 0.99937 weaklyHypermeth 1.00000000 1 insignificant 0.055350 0.0037278 weaklyHypermeth 0.53254 insignificant 0.77140 0.814186 -0.053516 6 0.76939 0.82287 -0.0534806 0.999370 0.0152221 weaklyHypometh 1 1 insignificant 0.999541 0.015101 weaklyHypometh 1 1 insignificant -0.0583718 0.0051758 weaklyHypometh 1 insignificant 0.78676 0.71378 0.067019 6 0.77964 0.71100 0.068642 2.5291e-03 0.99950 weaklyHypermeth 1.4877e-01 1 insignificant 7.2028e-03 0.99956 weaklyHypermeth 0.7202841 1 insignificant 0.061025 0.0189436 weaklyHypermeth 1.0000 insignificant 0.78676 0.81419 -0.0478419 6 0.77964 0.82287 -0.0432264 0.89254928 0.013784 weaklyHypometh 1.00000 1 insignificant 0.9757063 0.035614 weaklyHypometh 1 1 insignificant -0.052697 0.044486 weaklyHypometh 1 insignificant 0.71378 0.81419 -0.113317 6 0.71100 0.82287 -0.111869 1.00000 9.9381e-06 weaklyHypometh 1 1.6563e-03 weaklyHypometh 1.00000 1.3625e-05 weaklyHypometh 1 0.013625 weaklyHypometh -0.113722 2.9847e-05 weaklyHypometh 0.014924 weaklyHypometh chrX 133335845 133336845 164182 PHF6 ENSG00000156531 0.35636 37 5 0.04010 100 5 0.10359 69 5 0.16667 6 0 0.12406 85 5 0.31277 84 5 0.013118 82 5 0.38663 105 5 0.28667 60 5 0.082906 53 5 0.26432 160 5 0.04000 23 3 0.015152 32 2 0.00000 20 2 0.02000 48 5 0.033333 33 2 0.0083333 87 3 0.00000 10 0 0.12222 28 2 0.29287 117 5 0.10000 18 2 0.44048 27 2 0.00000 4 0 0.11111 47 5 0.62500 7 0 0.43945 155 5 0.23045 71 5 0.05000 13 2 0.46429 35 5 0.05510 111 5 0.50046 148 5 0.095912 178 5 0.00000 63 5 0.00000 11 0 0.05000 18 3 0.50000 4 0 0.00000 107 5 0.35485 124 5 0.05000 29 2 0.00000 19 2 0.20000 32 4 0.66667 6 0 0.00000 20 3 0.32035 0.047738 0.094017 0.13932 0.12048 0.15744 0.0094726 0.37064 0.25238 0.074481 0.28215 0.0095238 0.004329 0.00000 0.0047619 0.039683 0.070373 0.00000 0.14550 0.30512 0.11905 0.52041 0.072906 0.15873 0.60252 0.32620 0.29112 0.17739 0.52098 0.065595 0.53563 0.096211 0.00000 0.00000 0.084886 0.51346 0.00000 0.32306 0.052381 0.00000 0.047619 0.14286 0.0071429 0 0.17124 0.27429 -0.1023261 5 0.13557 0.23032 -0.0947520 0.99833 0.00098477 weaklyHypometh 1 0.98477 insignificant 0.99914 0.0028667 weaklyHypometh 1 1 insignificant -0.1258985 0.090328 lowCoverage 1 lowCoverage 0.17124 0.14067 0.016846 5 0.13557 0.12106 0.0145131 6.6302e-01 0.93117 insignificant 1.0000e+00 1 insignificant 4.2155e-01 0.96710 insignificant 1.00000000 1 insignificant -0.017353 0.8603839 lowCoverage 1.00000 lowCoverage 0.17191 0.085714 0.100113 0 0.25906 0.25274 0.0063241 0.012927 0.9999608 noCoverage 1 1 noCoverage 0.077976 0.964650 noCoverage 1 1 noCoverage -0.0498781 0.7182942 lowCoverage 1 lowCoverage 0.27429 0.14067 0.135432 5 0.23032 0.12106 0.109265 3.4803e-02 0.99765 weaklyHypermeth 1.0000e+00 1 insignificant 3.2468e-02 0.99976 weaklyHypermeth 1.0000000 1 insignificant 0.108546 0.3460693 lowCoverage 1.0000 lowCoverage 0.27429 0.07767 0.1969085 0 0.23032 0.21153 0.0187969 0.00036993 0.999998 noCoverage 0.18497 1 noCoverage 0.0018798 0.877609 noCoverage 1 1 noCoverage 0.076020 0.609318 lowCoverage 1 lowCoverage 0.14067 0.07767 0.070319 0 0.12106 0.21153 -0.090468 0.17526 9.9711e-01 noCoverage 1 1.0000e+00 noCoverage 0.36574 8.3945e-01 noCoverage 1 1.000000 noCoverage -0.032525 8.3931e-01 lowCoverage 1.000000 lowCoverage chrX 135544843 135545843 164321 ENSG00000208559 0.67503 300 7 0.65292 180 8 0.63669 194 6 0.70719 138 6 0.81925 103 6 0.66562 252 7 0.625640 137 6 0.74988 195 6 0.73634 177 6 0.860701 134 6 0.80353 205 8 0.55556 22 2 0.753746 235 6 0.60357 47 3 0.59677 104 6 0.661290 32 1 0.4700980 38 3 0.76119 150 6 0.87731 93 6 0.73001 349 7 0.77381 22 1 0.58231 99 6 0.87272 93 7 0.52207 90 8 0.82320 49 5 0.74443 365 7 0.70688 93 6 0.52976 59 6 0.67540 193 6 0.75255 217 7 0.82678 344 7 0.811454 406 7 0.36606 200 7 0.44853 77 6 1.00000 60 1 0.45417 31 1 0.71192 84 7 0.55188 268 7 0.70290 332 7 0.62673 123 7 0.67739 226 8 0.65912 147 6 0.71903 190 6 0.76274 0.669288 0.564002 0.69609 0.74743 0.70433 0.6442439 0.74724 0.63800 0.765250 0.70783 0.6135802 0.721757 0.65296 0.6788901 0.575467 0.467756 0.72037 0.84554 0.65383 0.63704 0.54763 0.821740 0.62357 0.72116 0.73799 0.58370 0.60741 0.57500 0.665802 0.78969 0.743637 0.36460 0.36576 NA 0.47901 0.66989 0.52950 0.677853 0.63135 0.599539 0.64482 0.7208153 1 0.72220 0.74606 -0.0085968 7 0.68126 0.65469 0.0265752 0.60246 0.72178103 insignificant 1 1.00000 insignificant 0.51910 0.7296535 insignificant 1 1 insignificant -0.0213298 0.610849 insignificant 1 insignificant 0.72220 0.55278 0.210748 7 0.68126 0.50912 0.1721448 1.1564e-08 0.99489 hypermethylated 1.6520e-06 1 hypermethylated 1.0520e-03 0.99770 weaklyHypermeth 0.15930496 1 insignificant 0.108357 0.3147696 lowCoverage 1.00000 lowCoverage 0.72352 0.743615 0.011618 7 0.74856 0.70123 0.0473301 0.191926 0.9255214 insignificant 1 1 insignificant 0.051221 0.978005 insignificant 1 1 insignificant 0.0200831 0.4850200 insignificant 1 insignificant 0.74606 0.55278 0.207271 7 0.65469 0.50912 0.145570 1.3459e-05 0.99538 hypermethylated 1.1215e-03 1 hypermethylated 6.6821e-03 0.99922 weaklyHypermeth 0.7202841 1 insignificant 0.129687 0.2456560 lowCoverage 1.0000 lowCoverage 0.74642 0.74361 0.0196330 7 0.73652 0.70123 0.0352902 0.40545385 0.920777 insignificant 1.00000 1 insignificant 0.0498973 0.947529 weaklyHypermeth 1 1 insignificant 0.041413 0.292387 insignificant 1 insignificant 0.55509 0.74361 -0.208824 7 0.57276 0.70123 -0.128476 0.94951 1.9786e-03 weaklyHypometh 1 1.3191e-01 insignificant 0.95820 4.2729e-02 weaklyHypometh 1 1.000000 insignificant -0.088274 4.0134e-01 lowCoverage 1.000000 lowCoverage chrX 135757173 135758173 164338 ENSG00000219403 0.85178 414 7 0.90238 125 7 0.78383 160 7 0.88977 241 7 0.82726 124 7 0.87826 259 7 0.745276 114 7 0.80267 148 8 0.77497 173 7 0.769545 148 7 0.85492 197 7 0.80079 36 4 0.845732 213 7 0.84019 72 7 0.80669 151 7 0.488095 17 2 0.7656926 44 4 0.89035 207 7 0.80814 99 7 0.83647 291 8 0.97917 24 2 0.75786 101 7 0.74564 96 7 0.76757 71 7 0.85000 76 4 0.83428 247 8 0.81713 103 7 0.89229 38 4 0.84693 152 7 0.87680 196 8 0.85142 174 7 0.870680 312 7 0.86954 111 7 0.75038 98 7 0.72431 107 5 0.83810 37 2 0.81473 83 8 0.68378 247 7 0.86637 336 7 0.86338 191 7 0.93225 350 7 0.91249 283 7 0.85678 218 7 0.82791 0.918395 0.820136 0.91714 0.83354 0.91703 0.7972198 0.83229 0.85224 0.825049 0.88760 0.8400000 0.862170 0.85569 0.8798042 0.524744 0.786157 0.90721 0.80499 0.84022 0.91434 0.68548 0.806307 0.83485 0.84091 0.84123 0.75552 0.90996 0.82558 0.907424 0.82235 0.887615 0.92330 0.73869 0.678210 0.82282 0.86721 0.61053 0.859992 0.88929 0.941160 0.92114 0.9018097 4 0.85215 0.83019 0.0212803 7 0.82984 0.84261 -0.0127717 0.30278 0.30030892 insignificant 1 1.00000 insignificant 0.77413 0.1332741 insignificant 1 1 insignificant -0.0326743 0.237892 insignificant 1 insignificant 0.85215 0.73353 0.115895 7 0.82984 0.78370 0.0461416 6.4589e-04 0.58253 weaklyHypermeth 3.3994e-02 1 weaklyHypermeth 5.7316e-01 0.57655 insignificant 1.00000000 1 insignificant 0.028000 0.4462011 insignificant 1.00000 insignificant 0.85220 0.897678 -0.039403 7 0.82751 0.87022 -0.0427155 0.995444 0.0834804 insignificant 1 1 insignificant 0.998071 0.015562 weaklyHypometh 1 1 insignificant -0.0781136 0.0055294 weaklyHypometh 1 insignificant 0.83019 0.73353 0.096535 7 0.84261 0.78370 0.058913 8.1125e-02 0.94707 insignificant 1.0000e+00 1 insignificant 3.4861e-01 0.96058 insignificant 1.0000000 1 insignificant 0.060674 0.1144416 insignificant 1.0000 insignificant 0.82866 0.89768 -0.0612036 7 0.82727 0.87022 -0.0429544 0.96123860 0.084483 insignificant 1.00000 1 insignificant 0.9645799 0.237091 insignificant 1 1 insignificant -0.045439 0.080152 insignificant 1 insignificant 0.73037 0.89768 -0.156586 7 0.75279 0.87022 -0.117427 0.99212 8.3090e-03 weaklyHypometh 1 4.1545e-01 insignificant 0.98966 7.8983e-02 insignificant 1 1.000000 insignificant -0.106114 1.3807e-02 weaklyHypometh 1.000000 insignificant chrX 136263295 136264295 164394 ENSG00000217721 0.84709 270 6 0.70509 120 6 0.54764 203 6 0.90238 94 3 0.94304 95 6 0.89498 163 6 0.896261 175 6 0.77487 166 6 0.79674 246 6 0.831325 152 6 0.81695 206 6 0.85232 90 6 0.824544 200 6 0.93333 23 2 0.86541 90 6 0.876118 78 6 0.6964956 153 6 0.83533 97 3 0.89344 136 6 0.74879 269 6 0.81532 38 3 0.79722 35 3 0.86641 70 6 0.78557 77 4 0.86243 43 3 0.81004 223 6 0.74725 74 6 0.73010 119 6 0.78529 152 5 0.89757 130 6 0.76303 231 6 0.885605 312 6 0.46171 101 6 0.48928 108 6 0.68116 138 1 0.73056 27 2 0.62222 60 6 0.52559 252 6 0.81385 354 6 0.87778 89 3 0.75168 194 3 0.84816 176 6 0.81774 104 3 0.81347 0.706059 0.536877 0.83917 0.94411 0.88777 0.8194766 0.67304 0.76900 0.802424 0.79032 0.7810134 0.803508 0.93317 0.8493640 0.791643 0.560381 0.72998 0.87652 0.69577 0.85362 0.64968 0.773036 0.68442 0.76999 0.75268 0.64072 0.74390 0.74835 0.900653 0.74477 0.843735 0.38355 0.35802 NA 0.62930 0.42378 0.43185 0.756841 0.78726 0.761969 0.75629 0.6936529 3 0.78123 0.78657 -0.0099069 6 0.80518 0.80987 -0.0046867 0.80958 0.47232089 insignificant 1 1.00000 insignificant 0.56373 0.6238183 insignificant 1 1 insignificant 0.0119523 0.653768 insignificant 1 insignificant 0.78123 0.50437 0.275265 6 0.80518 0.57788 0.2273010 1.6562e-11 1.00000 hypermethylated 3.3124e-09 1 hypermethylated 2.2881e-07 0.99999 hypermethylated 0.00022881 1 hypermethylated 0.239021 0.0016072 lowCoverage 0.26787 lowCoverage 0.78123 0.717557 0.007087 6 0.80518 0.81882 -0.0136393 0.616654 0.1714762 insignificant 1 1 insignificant 0.492396 0.146068 insignificant 1 1 insignificant 0.0022664 0.9404372 lowCoverage 1 lowCoverage 0.78657 0.50437 0.288870 6 0.80987 0.57788 0.231988 1.6773e-09 0.99999 hypermethylated 8.3863e-07 1 hypermethylated 6.3038e-06 1.00000 hypermethylated 0.0031519 1 hypermethylated 0.227068 0.0026424 lowCoverage 0.4404 lowCoverage 0.78657 0.71756 0.0106853 6 0.80987 0.81882 -0.0089525 0.64204688 0.235088 insignificant 1.00000 1 insignificant 0.8440061 0.282204 insignificant 1 1 insignificant -0.009686 0.721542 lowCoverage 1 lowCoverage 0.50437 0.71756 -0.285663 6 0.57788 0.81882 -0.240940 0.99999 9.8608e-06 hypomethylated 1 1.6563e-03 hypomethylated 1.00000 6.0409e-05 hypomethylated 1 0.030205 hypomethylated -0.236754 1.9399e-03 lowCoverage 0.484970 lowCoverage chrX 136402864 136403864 164413 ENSG00000134598 0.84336 95 5 0.73929 66 5 0.74505 60 5 0.70500 104 5 0.64408 39 5 0.68851 146 5 0.801587 39 5 0.58576 67 5 0.80000 27 1 0.861111 27 1 0.73142 108 5 0.83000 24 4 0.923893 57 5 0.58766 41 5 0.66611 54 5 0.660000 42 4 0.8000000 5 0 0.79590 127 5 0.77286 46 5 0.73509 105 5 0.67111 29 5 0.78571 31 4 0.70714 46 5 0.73429 47 5 0.28333 15 1 0.80184 95 5 0.66775 35 4 0.50000 4 0 0.81349 56 5 0.79798 71 5 0.86199 58 5 0.837879 148 5 0.69063 90 5 0.63333 68 5 0.78431 74 5 0.80000 9 0 0.56144 52 5 0.69424 123 5 0.80242 66 5 0.92767 75 5 0.81303 123 5 0.72256 36 5 0.78714 104 5 0.77414 0.731686 0.744159 0.70267 0.57861 0.68072 0.7591308 0.58569 0.76117 0.828479 0.72565 0.8276699 0.890422 0.58643 0.6576321 0.669903 0.805825 0.79602 0.76928 0.67357 0.66775 0.89417 0.709431 0.72954 0.35049 0.67894 0.66683 NA 0.81199 0.756693 0.83473 0.768545 0.62758 0.63430 0.740148 0.79126 0.56051 0.62670 0.795072 0.92581 0.807557 0.72616 0.7831484 0 0.72400 0.75118 -0.0313104 5 0.82742 0.78598 0.0414377 0.88564 0.44344080 insignificant 1 1.00000 insignificant 0.76086 0.9313844 insignificant 1 1 insignificant 0.0406239 0.445815 lowCoverage 1 lowCoverage 0.72314 0.64663 0.076844 5 0.76989 0.70397 0.0659187 1.5003e-02 0.99983 weaklyHypermeth 6.0739e-01 1 insignificant 1.2127e-01 0.99895 insignificant 1.00000000 1 insignificant 0.051841 0.2506448 lowCoverage 1.00000 lowCoverage 0.72161 0.819307 -0.098273 5 0.72387 0.82254 -0.0986669 0.999897 0.0021620 weaklyHypometh 1 1 insignificant 0.997338 0.020048 weaklyHypometh 1 1 insignificant -0.0647342 0.1379736 lowCoverage 1 lowCoverage 0.75000 0.64663 0.106023 5 0.77020 0.70397 0.066224 2.2366e-03 0.99465 weaklyHypermeth 1.3979e-01 1 insignificant 5.6341e-02 0.97352 insignificant 1.0000000 1 insignificant 0.011217 0.8549193 lowCoverage 1.0000 lowCoverage 0.74879 0.81931 -0.0652852 5 0.75281 0.82254 -0.0697290 0.99218958 0.043235 weaklyHypometh 1.00000 1 insignificant 0.9955940 0.047942 weaklyHypometh 1 1 insignificant -0.105358 0.090831 lowCoverage 1 lowCoverage 0.64320 0.81931 -0.176042 5 0.64477 0.82254 -0.177769 1.00000 1.3621e-05 weaklyHypometh 1 1.9459e-03 weaklyHypometh 0.99958 3.7209e-03 weaklyHypometh 1 0.471640 insignificant -0.116575 4.3253e-02 lowCoverage 1.000000 lowCoverage chrX 139502117 139503117 164714 SOX3 ENSG00000134595 0.95596 107 5 0.74206 57 1 0.84195 53 5 0.92683 41 1 0.97778 40 5 0.92237 146 6 0.913630 74 5 0.79426 69 5 0.93351 62 5 0.934524 28 1 0.87547 218 6 0.94286 15 1 0.755952 49 5 0.96970 13 1 0.93333 35 5 0.800000 5 1 1.0000000 2 0 0.73925 45 1 0.98000 60 5 0.84302 229 6 0.86111 25 1 0.62500 8 1 1.00000 10 1 0.48333 66 1 1.00000 1 0 0.92161 122 5 0.82716 36 1 0.74747 26 1 0.79167 48 1 0.94203 82 5 0.74598 113 5 0.896551 247 6 0.89583 30 1 0.33333 12 1 0.97368 43 2 NA 0 0 0.38397 66 5 0.57623 124 5 0.96643 198 5 0.97287 56 1 0.95000 93 5 0.95909 48 1 0.82286 55 5 0.90244 0.785714 0.551724 0.92683 0.86667 0.84536 0.7894737 0.71795 0.67742 0.857143 0.83117 0.7142857 0.535714 0.90909 0.6666667 0.800000 1.000000 0.61290 0.90000 0.77778 0.66667 0.62500 1.000000 0.91667 1.00000 0.81538 0.62963 0.90909 0.79167 0.652174 0.54000 0.762963 0.37500 0.33333 0.947368 NA 0.16216 0.29070 0.851240 0.83721 0.950000 0.79545 0.9142857 1 0.84125 0.80867 0.0240496 5 0.89372 0.86885 0.0248698 0.51428 0.93481418 insignificant 1 1.00000 insignificant 0.38796 0.9775363 insignificant 1 1 insignificant 0.0689632 0.173387 lowCoverage 1 lowCoverage 0.84113 0.46545 0.356250 1 0.87601 0.59010 0.2859108 5.9412e-14 1.00000 lowCoverage 1.9804e-11 1 lowCoverage 1.7358e-03 0.99995 lowCoverage 0.17604050 1 lowCoverage 0.256513 0.1205640 lowCoverage 1.00000 lowCoverage 0.84113 0.895556 -0.063545 5 0.87601 0.94559 -0.0695796 0.997660 0.0131556 weaklyHypometh 1 1 insignificant 0.982262 0.064844 insignificant 1 1 insignificant -0.0451269 0.2187148 lowCoverage 1 lowCoverage 0.80843 0.46545 0.324941 1 0.84700 0.59010 0.256896 1.4832e-07 0.99777 lowCoverage 2.4720e-05 1 lowCoverage 2.3641e-02 0.98670 lowCoverage 1.0000000 1 lowCoverage 0.187550 0.2320370 lowCoverage 1.0000 lowCoverage 0.80843 0.89556 -0.0875679 5 0.84700 0.94559 -0.0985944 0.99461351 0.012612 weaklyHypometh 1.00000 1 insignificant 0.9972748 0.040586 weaklyHypometh 1 1 insignificant -0.114090 0.046491 lowCoverage 1 lowCoverage 0.46545 0.89556 -0.435771 1 0.59010 0.94559 -0.355490 1.00000 5.1662e-08 lowCoverage 1 5.1662e-05 lowCoverage 0.99998 4.9022e-03 lowCoverage 1 0.490221 lowCoverage -0.301640 8.0928e-02 lowCoverage 1.000000 lowCoverage chrX 140531645 140532645 164776 SPANXA1 ENSG00000203926 0.70886 107 7 0.70417 59 7 0.72222 42 6 0.62813 51 7 0.61218 64 6 0.65004 66 5 0.737585 71 6 0.78077 79 6 0.72619 62 7 0.677083 57 6 0.85227 119 7 0.70068 30 3 0.814286 111 7 0.77861 92 6 0.61508 53 6 0.430556 42 3 0.9259259 27 3 0.71894 79 8 0.74509 47 6 0.83929 75 7 0.80298 37 3 0.91667 9 0 0.70000 34 4 0.91667 35 6 0.71429 39 4 0.71965 86 7 0.70268 36 5 0.88160 29 3 0.70089 65 7 0.59352 84 7 0.71120 97 7 0.838889 60 7 0.75855 99 7 0.54167 23 0 0.69986 93 8 0.75000 5 0 0.48299 21 1 0.82103 56 7 0.79841 92 7 0.67750 111 7 0.79509 111 7 0.77429 87 4 0.68155 94 7 0.69448 0.765591 0.794633 0.73992 0.63513 0.77020 0.7368856 0.78037 0.74597 0.799731 0.86406 0.7626728 0.806745 0.77973 0.7296467 0.511031 0.849711 0.78240 0.78422 0.80712 0.81820 0.90445 0.703917 0.93548 0.72581 0.73840 0.82627 0.94780 0.84505 0.771371 0.68118 0.734677 0.70869 0.69892 0.762811 0.75466 0.57965 0.80384 0.838530 0.80032 0.818100 0.84065 0.7187500 0 0.74269 0.75941 -0.0233903 7 0.66275 0.71673 -0.0539780 0.81575 0.29031798 insignificant 1 1.00000 insignificant 0.96241 0.0331204 weaklyHypometh 1 1 insignificant -0.0481883 0.215956 insignificant 1 insignificant 0.74269 0.72727 0.038410 7 0.66275 0.66955 -0.0067941 3.1493e-01 0.91607 insignificant 1.0000e+00 1 insignificant 3.0500e-01 0.60928 insignificant 1.00000000 1 insignificant 0.042714 0.4957502 lowCoverage 1.00000 lowCoverage 0.74361 0.806061 -0.036567 7 0.70393 0.67829 0.0256379 0.576173 0.1560108 insignificant 1 1 insignificant 0.789630 0.061538 insignificant 1 1 insignificant -0.0269707 0.4703652 insignificant 1 insignificant 0.75941 0.72727 0.059588 7 0.71673 0.66955 0.047184 1.9698e-01 0.98234 insignificant 1.0000e+00 1 insignificant 7.0822e-02 0.98000 insignificant 1.0000000 1 insignificant 0.090902 0.1807395 lowCoverage 1.0000 lowCoverage 0.76026 0.80606 -0.0035174 7 0.74382 0.67829 0.0655299 0.49756378 0.126164 insignificant 1.00000 1 insignificant 0.2271578 0.445229 insignificant 1 1 insignificant 0.021218 0.606776 insignificant 1 insignificant 0.72881 0.80606 -0.068359 7 0.69074 0.67829 0.012448 0.83342 1.1205e-01 insignificant 1 1.0000e+00 insignificant 0.76907 1.8731e-01 insignificant 1 1.000000 insignificant -0.069685 2.8920e-01 lowCoverage 1.000000 lowCoverage chrX 142949987 142950987 164875 UBE2NL ENSG00000102069 0.85233 291 10 0.84661 109 6 0.69808 68 4 0.87657 302 10 0.89545 51 3 0.86446 309 11 0.708333 59 4 0.88312 81 5 0.85417 34 1 0.912698 45 4 0.86330 185 11 0.75833 32 3 0.928860 79 6 NA 0 0 0.95011 57 7 0.750000 14 2 0.8865014 40 2 0.89781 346 10 0.83518 116 10 0.78413 215 11 0.70000 16 0 0.83365 111 9 0.88671 138 10 1.00000 27 3 0.97182 71 5 0.90215 178 11 0.97521 80 5 1.00000 11 0 0.90238 56 5 0.82726 157 10 0.84736 141 9 0.860706 358 11 0.78862 100 6 0.70646 122 6 0.86212 211 11 0.74116 54 6 0.87143 34 4 0.82778 147 10 0.84993 265 10 0.91386 373 10 0.91425 316 10 0.85221 298 10 0.82005 321 10 0.92764 0.809572 0.715726 0.93118 0.83214 0.88926 0.8083333 0.89388 0.87500 0.957937 0.91383 0.7001190 0.814830 NA 0.9522676 0.804618 0.963203 0.91833 0.90710 0.84037 1.00000 0.82840 0.935199 0.99991 0.97575 0.98393 0.97662 0.98608 0.94619 0.952136 0.89788 0.901431 0.86750 0.72428 0.928120 0.85456 0.87571 0.84980 0.954672 0.96001 0.928681 0.94878 0.9422659 0 0.87587 0.87946 -0.0143833 9 0.85444 0.87573 -0.0212913 0.72358 0.01554680 weaklyHypometh 1 1.00000 insignificant 0.88770 0.0023390 weaklyHypometh 1 1 insignificant -0.0477408 0.129520 insignificant 1 insignificant 0.87587 0.81437 0.059658 10 0.85444 0.80962 0.0448250 3.0259e-04 0.99589 weaklyHypermeth 1.7800e-02 1 weaklyHypermeth 1.3897e-02 0.97550 weaklyHypermeth 0.92646813 1 insignificant 0.044935 0.1907059 insignificant 1.00000 insignificant 0.87603 0.919898 -0.041134 10 0.85939 0.88231 -0.0229129 0.976485 0.0218496 weaklyHypometh 1 1 insignificant 0.755304 0.101540 insignificant 1 1 insignificant -0.0255332 0.3301781 insignificant 1 insignificant 0.87946 0.81437 0.075061 9 0.87573 0.80962 0.066116 5.7185e-06 0.99979 weaklyHypermeth 5.7185e-04 1 weaklyHypermeth 7.4990e-05 0.99989 weaklyHypermeth 0.0249968 1 weaklyHypermeth 0.092676 0.0266007 weaklyHypermeth 1.0000 insignificant 0.87919 0.91990 -0.0263956 9 0.86444 0.88231 -0.0178679 0.95933742 0.112113 insignificant 1.00000 1 insignificant 0.3402257 0.917619 insignificant 1 1 insignificant 0.022208 0.492298 insignificant 1 insignificant 0.81409 0.91990 -0.099297 10 0.79231 0.88231 -0.089995 0.99936 2.4021e-06 weaklyHypometh 1 8.0071e-04 weaklyHypometh 0.98561 1.0450e-03 weaklyHypometh 1 0.209001 insignificant -0.070468 6.3362e-02 insignificant 1.000000 insignificant chrX 146426318 146427318 165014 MIR514-3 ENSG00000207867 0.79261 100 6 0.81236 99 6 0.60491 61 6 0.891026 78 6 0.717857 46 4 0.786017 197 6 0.8356969 123 6 0.85695 40 3 0.78333 63 6 0.71111 30 3 0.83190 136 6 0.75833 29 4 0.7918301 67 6 0.81667 31 3 0.7174603 33 3 0.64815 22 2 NA 0 0 0.81446 83 6 0.823743 71 6 0.82205 149 6 0.93750 28 4 0.500000 2 0 0.757021 70 6 0.86111 45 4 1.000000 4 0 0.74135 143 6 0.76899 63 6 0.87222 40 6 0.65015 78 4 0.776112 158 6 0.83786 131 6 0.86693 123 6 0.62852 96 6 0.39141 34 2 0.60981 148 6 1.00000 2 0 0.600590 80 6 0.71230 167 6 0.79853 311 6 0.86684 164 6 0.775758 81 6 0.76869 41 6 0.83218 102 6 0.69490 0.676742 0.49062 0.782051 0.704545 0.707838 0.731061 0.81478 0.66061 0.53712 0.72087 0.659091 0.7026144 0.63333 0.768254 0.64557 NA 0.78602 0.688312 0.72425 0.87500 0.521173 0.595918 0.72222 0.854506 0.53611 0.72941 0.74444 0.50261 0.614035 0.729076 0.82766 0.47636 0.39256 0.567447 0.80025 0.44623 0.55619 0.71188 0.747563 0.690174 0.64848 0.692424 0 0.78189 0.79661 1.4035e-03 6 0.79939 0.80163 -0.00223642 0.475497 0.4313857 insignificant 1 1 insignificant 0.588383 0.269228 insignificant 1 1 insignificant -0.01762193 0.67801 lowCoverage 1 lowCoverage 0.78189 0.65275 0.1620175 6 0.79939 0.63913 0.1602581 8.1009e-09 0.99075907 weaklyHypermeth 1.2664e-06 1.00000 weaklyHypermeth 2.1765e-04 0.99942712 weaklyHypermeth 4.0832e-02 1.00000 weaklyHypermeth 0.12270901 1.9395e-01 lowCoverage 1.0000000 lowCoverage 0.78189 0.81545 -0.0089911 6 0.79939 0.80680 -0.0074110 8.5764e-01 0.4261609 insignificant 1.0000e+00 1.00000 insignificant 7.4646e-01 0.63741447 insignificant 1.000000 1.00000 insignificant -0.0285846 0.26967917 lowCoverage 1.00000 lowCoverage 0.79661 0.65275 0.1617214 6 0.80163 0.63913 0.1624945 5.5642e-07 0.9922496 weaklyHypermeth 7.4560e-05 1 weaklyHypermeth 1.9601e-04 0.99968237 weaklyHypermeth 4.5964e-02 1.00000 weaklyHypermeth 0.1403309 1.5987e-01 lowCoverage 1.000000 lowCoverage 0.79661 0.81545 -0.0067969 6 0.80163 0.80680 -0.0051746 7.0376e-01 0.355159 insignificant 1.0000e+00 1 insignificant 0.53669614 0.45338609 insignificant 1.000000 1.00000 insignificant -0.0109627 0.799614 lowCoverage 1 lowCoverage 0.65275 0.81545 -0.1671296 6 0.63913 0.80680 -0.167669 0.993515 1.1511e-04 weaklyHypometh 1 1.0797e-02 weaklyHypometh 0.99468 4.4042e-03 weaklyHypometh 1 5.4249e-01 insignificant -0.15129365 1.2320e-01 lowCoverage 1.000000 lowCoverage chrX 149144100 149145100 165311 ENSG00000183171 0.31773 90 5 0.00000 38 3 0.23193 138 5 0.000000 29 4 0.272752 70 5 0.046812 127 5 0.0081633 128 5 0.29296 88 5 0.30155 101 5 0.23857 99 5 0.23139 109 5 0.06500 41 4 0.0458824 133 5 NA 0 0 0.0083333 64 5 0.00000 26 2 0.094063 105 5 0.41111 36 1 0.000000 72 2 0.28498 249 5 0.00000 21 2 0.017857 39 1 0.000000 60 5 0.33602 44 2 0.018519 22 1 0.19260 152 5 0.33776 48 3 0.16296 50 2 0.22824 81 4 0.000000 88 5 0.09115 158 5 0.17958 345 5 0.47199 50 5 0.37606 68 5 0.00000 131 4 0.22045 25 3 0.928571 24 2 0.28599 96 5 0.33591 142 5 0.16071 56 5 0.033333 100 5 0.28004 114 5 0.15909 40 3 0.31711 0.000000 0.10203 0.000000 0.099332 0.028055 0.029506 0.19778 0.26098 0.16365 0.25567 0.033434 0.0038979 NA 0.030120 0.00000 0.13485 0.09739 0.012651 0.19592 0.00000 0.051635 0.000000 0.29169 0.065057 0.12747 0.22446 0.22262 0.12027 0.000000 0.042396 0.10540 0.25869 0.34426 0.085472 0.21457 0.74182 0.38269 0.26422 0.075516 0.019411 0.24371 0.061975 1 0.15729 0.13899 1.4838e-02 5 0.17546 0.16464 0.01081574 0.313010 0.7584936 insignificant 1 1 insignificant 0.218312 0.729143 insignificant 1 1 insignificant 0.01967414 0.69165 lowCoverage 1 lowCoverage 0.15729 0.24365 -0.0872095 5 0.17546 0.25593 -0.0804745 7.6915e-01 0.00914084 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9992e-01 0.00044008 weaklyHypometh 1.0000e+00 0.41279 insignificant -0.23044832 1.3344e-01 lowCoverage 1.0000000 lowCoverage 0.15729 0.18142 -0.0319595 5 0.17546 0.21297 -0.0375147 9.1784e-01 0.2321362 insignificant 1.0000e+00 1.00000 insignificant 9.6315e-01 0.24552604 insignificant 1.000000 1.00000 insignificant -0.0437541 0.50119959 lowCoverage 1.00000 lowCoverage 0.13899 0.24365 -0.1028311 5 0.16464 0.25593 -0.0912903 9.0853e-01 0.0227695 weaklyHypometh 1.0000e+00 1 insignificant 9.9996e-01 0.00018649 weaklyHypometh 1.0000e+00 0.17493 insignificant -0.2501225 1.0983e-01 lowCoverage 1.000000 lowCoverage 0.13899 0.18142 -0.0473555 5 0.16464 0.21297 -0.0483304 9.7018e-01 0.141952 insignificant 1.0000e+00 1 insignificant 0.95788564 0.04791315 weaklyHypometh 1.000000 1.00000 insignificant -0.0634283 0.352948 lowCoverage 1 lowCoverage 0.24365 0.18142 0.0531379 5 0.25593 0.21297 0.042960 0.357872 7.8309e-01 insignificant 1 1.0000e+00 insignificant 0.05331 9.9856e-01 insignificant 1 1.0000e+00 insignificant 0.18669420 2.2062e-01 lowCoverage 1.000000 lowCoverage chrX 149425769 149426769 165331 ENSG00000221004 0.26895 264 9 0.10810 128 7 0.23587 284 9 0.015152 149 3 0.086636 228 9 0.177685 119 4 0.0731573 395 10 0.38275 163 9 0.36832 232 8 0.20830 209 7 0.41603 277 8 0.28865 102 5 0.0076477 245 7 0.00000 9 1 0.0091398 167 7 0.26433 191 6 0.235653 166 7 0.17384 135 3 0.023216 182 7 0.27965 192 7 0.14333 51 7 0.081111 48 3 0.088388 119 8 0.42622 101 6 0.180976 43 3 0.24603 240 7 0.34395 140 7 0.34156 59 8 0.26210 153 7 0.013573 180 7 0.21728 253 8 0.10902 256 7 0.18596 89 7 0.13705 150 7 0.10016 144 4 0.42762 27 3 0.089922 77 8 0.24364 182 7 0.33904 276 4 0.26256 122 3 0.150092 302 3 0.38459 210 3 0.16981 137 4 0.37697 0.087242 0.26510 0.040764 0.092325 0.185381 0.023956 0.30956 0.30866 0.29858 0.36572 0.266182 0.0107498 NA 0.017030 0.18144 0.20145 0.17740 0.025953 0.38554 0.24944 0.127401 0.092492 0.36624 0.162579 0.25267 0.35288 0.28841 0.31028 0.006108 0.221849 0.12917 0.12743 0.21486 0.247900 0.30549 0.20331 0.27908 0.44042 0.303924 0.072434 0.48391 0.203892 3 0.20068 0.21850 -1.4782e-02 7 0.18592 0.18043 0.00549187 0.859706 0.6912074 insignificant 1 1 insignificant 0.944538 0.832984 insignificant 1 1 insignificant -0.02330729 0.62388 insignificant 1 insignificant 0.20094 0.18685 0.0047476 7 0.20282 0.19428 0.0085364 4.6924e-01 0.00050334 inconclusive 1.0000e+00 0.47214 insignificant 2.9782e-01 0.20448022 insignificant 1.0000e+00 1.00000 insignificant -0.01623690 7.9215e-01 insignificant 1.0000000 insignificant 0.20094 0.28176 -0.0564483 3 0.20282 0.23807 -0.0352531 7.9197e-01 0.1040775 lowCoverage 1.0000e+00 1.00000 lowCoverage 6.5639e-01 0.13193404 lowCoverage 1.000000 1.00000 lowCoverage -0.0800670 0.18280673 lowCoverage 1.00000 lowCoverage 0.21864 0.18685 0.0330390 7 0.19683 0.19428 0.0025453 4.2159e-01 0.0067105 inconclusive 1.0000e+00 1 insignificant 3.3204e-01 0.27263324 insignificant 1.0000e+00 1.00000 insignificant 0.0070704 9.1278e-01 insignificant 1.000000 insignificant 0.21864 0.28176 -0.0718142 3 0.19683 0.23807 -0.0412442 8.7331e-01 0.183996 lowCoverage 1.0000e+00 1 lowCoverage 0.76874794 0.30304850 lowCoverage 1.000000 1.00000 lowCoverage -0.0567597 0.354984 lowCoverage 1 lowCoverage 0.18685 0.28176 -0.0278965 3 0.19428 0.23807 -0.043789 0.205758 3.7523e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.69399 3.3564e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.06383013 3.7917e-01 lowCoverage 1.000000 lowCoverage chrX 152395383 152396383 165412 HAUS7 ENSG00000213397 0.83018 148 5 0.51506 48 5 0.75116 97 5 0.787778 90 5 0.746667 29 4 0.678290 100 5 0.6214486 88 5 0.77660 95 5 0.72705 138 5 0.82699 104 5 0.85338 93 5 0.78718 31 2 0.7167758 177 5 0.75556 28 4 0.6765915 49 5 0.82857 12 2 0.580278 52 4 0.49213 101 5 0.726303 86 5 0.67649 150 5 0.67246 54 4 0.682490 91 5 0.773613 76 5 0.71526 104 5 0.744209 93 5 0.72072 110 5 0.68607 112 5 0.73107 84 5 0.80623 89 5 0.713929 66 5 0.67575 85 5 0.81383 182 5 0.00000 63 4 0.27293 127 4 0.00800 161 5 0.26121 74 5 0.128571 40 4 0.19138 90 5 0.73562 180 5 0.71140 100 5 0.651773 128 4 0.61688 206 5 0.66538 82 5 0.80587 0.643415 0.68865 0.783960 0.798942 0.673601 0.617885 0.75023 0.70238 0.74527 0.84953 0.765771 0.6793174 0.74828 0.602177 0.76198 0.55547 0.49020 0.704839 0.66490 0.72786 0.668816 0.737847 0.74531 0.713176 0.69686 0.68013 0.70613 0.82093 0.668783 0.689430 0.81342 0.00000 0.23813 0.007619 0.28405 0.14878 0.20187 0.72040 0.673985 0.603289 0.60156 0.623932 4 0.71103 0.73386 -2.4064e-02 5 0.71653 0.74233 -0.02579985 0.441903 0.0187194 weaklyHypometh 1 1 insignificant 0.212809 0.041243 weaklyHypometh 1 1 insignificant -0.01024706 0.70433 lowCoverage 1 lowCoverage 0.71103 0.13694 0.5680301 5 0.71653 0.13579 0.5807370 9.9932e-38 1.00000000 hypermethylated 9.3736e-35 1.00000 hypermethylated 2.4367e-14 1.00000000 hypermethylated 2.2857e-11 1.00000 hypermethylated 0.57404065 1.0613e-05 lowCoverage 0.0049774 lowCoverage 0.71103 0.65517 0.0481136 5 0.71653 0.67532 0.0412079 1.7058e-01 0.9592778 insignificant 1.0000e+00 1.00000 insignificant 7.9204e-02 0.95002591 insignificant 1.000000 1.00000 insignificant 0.0415127 0.20289549 lowCoverage 1.00000 lowCoverage 0.73386 0.13694 0.5954358 5 0.74233 0.13579 0.6065368 2.3847e-32 1.0000000 hypermethylated 2.2368e-29 1 hypermethylated 8.4076e-13 1.00000000 hypermethylated 7.8864e-10 1.00000 hypermethylated 0.5842877 3.2207e-05 lowCoverage 0.020171 lowCoverage 0.73386 0.65517 0.0723506 5 0.74233 0.67532 0.0670077 7.1454e-03 0.924214 weaklyHypermeth 1.0000e+00 1 insignificant 0.02062376 0.82728336 weaklyHypermeth 1.000000 1.00000 insignificant 0.0517598 0.077459 lowCoverage 1 lowCoverage 0.13694 0.65517 -0.5151186 5 0.13579 0.67532 -0.539529 1.000000 3.3925e-17 hypomethylated 1 3.1822e-14 hypomethylated 1.00000 1.4522e-08 hypomethylated 1 1.3621e-05 hypomethylated -0.53252795 2.7688e-05 lowCoverage 0.012986 lowCoverage chrX 152408496 152409496 165414 HAUS7 ENSG00000213397 0.93964 150 6 0.90231 100 6 0.75250 228 6 0.972412 117 4 0.941367 157 6 0.881232 90 5 0.9158514 219 6 0.95561 149 5 0.90885 244 6 0.99184 179 6 0.89766 186 6 0.80897 83 6 0.9264911 226 6 0.90598 45 4 0.9060946 123 6 0.84589 80 3 0.797295 112 5 0.85594 80 2 0.942858 182 6 0.96209 154 5 0.84747 46 4 0.895766 57 4 0.941667 92 6 0.88145 83 6 1.000000 45 4 0.93811 206 6 0.91768 94 6 0.94306 81 6 0.87344 205 5 0.956863 136 6 0.90732 222 6 0.89489 177 5 0.92640 66 6 0.69187 209 6 0.83333 62 3 0.89011 30 2 0.972222 53 5 0.49543 239 6 0.85304 158 4 0.84968 61 2 0.926036 128 4 0.82843 132 4 0.96303 44 2 0.94485 0.911328 0.82554 0.948885 0.949292 0.849602 0.940631 0.95940 0.89959 0.98524 0.85953 0.853638 0.9293092 0.92849 0.893664 0.72857 0.81196 0.90090 0.948867 0.94332 0.90059 0.883929 0.971645 0.84354 1.000000 0.94112 0.91256 0.96701 0.94377 0.978482 0.934532 0.88609 0.88925 0.77277 0.948965 0.80438 0.95022 0.54471 0.90929 0.851936 0.880268 0.82278 0.932679 2 0.90702 0.92590 -1.8301e-02 6 0.90470 0.91796 -0.01326081 0.913274 0.1969526 insignificant 1 1 insignificant 0.949176 0.235677 insignificant 1 1 insignificant -0.01593251 0.39244 insignificant 1 insignificant 0.90702 0.73556 0.1712109 6 0.90470 0.73346 0.1712414 9.2661e-08 0.99999951 weaklyHypermeth 1.2417e-05 1.00000 weaklyHypermeth 4.4390e-01 0.71534271 insignificant 1.0000e+00 1.00000 insignificant 0.09898408 2.3587e-01 lowCoverage 1.0000000 lowCoverage 0.90702 0.87572 0.0319573 4 0.90470 0.86883 0.0358753 6.6591e-02 0.9896877 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.9681e-01 0.88463921 lowCoverage 1.000000 1.00000 lowCoverage 0.0164994 0.59100890 lowCoverage 1.00000 lowCoverage 0.92590 0.73556 0.1900971 6 0.91796 0.73346 0.1845022 3.9404e-07 0.9999992 weaklyHypermeth 6.1602e-05 1 weaklyHypermeth 2.2152e-01 0.86949997 insignificant 1.0000e+00 1.00000 insignificant 0.1149166 1.7745e-01 lowCoverage 1.000000 lowCoverage 0.92590 0.87572 0.0534864 4 0.91796 0.86883 0.0491361 3.1540e-03 0.999408 lowCoverage 9.7024e-01 1 lowCoverage 0.10392571 0.97964314 lowCoverage 1.000000 1.00000 lowCoverage 0.0324319 0.298310 lowCoverage 1 lowCoverage 0.73556 0.87572 -0.1538990 4 0.73346 0.86883 -0.135366 0.996979 3.0018e-02 lowCoverage 1 9.7092e-01 lowCoverage 0.91982 6.1171e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.08248471 3.2558e-01 lowCoverage 1.000000 lowCoverage chrX 152410585 152411585 165415 HAUS7 ENSG00000213397 0.75082 177 8 0.51250 53 8 0.51652 73 5 0.694228 65 7 0.821429 30 2 0.699342 88 8 0.4478659 86 8 0.71316 117 7 0.67687 93 8 0.79014 92 8 0.71742 225 8 0.88889 7 0 0.4882173 159 8 0.12500 8 0 0.3937500 43 5 0.80000 9 0 0.722222 16 0 0.67376 82 8 0.603630 100 8 0.67849 170 8 0.47747 50 5 0.666667 48 5 0.643831 59 6 0.55912 64 2 0.928030 68 8 0.80529 173 8 0.77083 59 5 0.76435 52 2 0.79806 88 5 0.585557 89 5 0.69278 207 8 0.72342 236 8 0.64000 58 6 0.59901 118 8 0.72917 35 3 0.31147 40 3 0.667666 48 5 0.56255 196 5 0.65979 91 8 0.80975 61 6 0.691228 135 8 0.74953 113 8 0.65625 53 3 0.74772 0.554264 0.63198 0.853428 0.711677 0.674170 0.449352 0.71438 0.80546 0.81415 0.73663 0.749078 0.5327214 0.52385 0.346512 0.69202 0.68663 0.64069 0.612730 0.68555 0.66111 0.602713 0.728541 0.50335 0.893734 0.78423 0.71512 0.72866 0.86614 0.649821 0.724020 0.82513 0.69767 0.58944 0.633937 0.44213 0.62982 0.59628 0.67128 0.796831 0.704155 0.77957 0.610465 0 0.66332 0.75440 -8.6071e-02 8 0.70963 0.78445 -0.07482436 0.999976 0.0087595 weaklyHypometh 1 1 insignificant 0.999861 0.022363 weaklyHypometh 1 1 insignificant -0.06557117 0.23044 insignificant 1 insignificant 0.66332 0.60121 0.0758124 8 0.70963 0.57165 0.1379773 2.1385e-02 0.98621924 weaklyHypermeth 5.7312e-01 1.00000 insignificant 2.5254e-01 0.96718361 insignificant 1.0000e+00 1.00000 insignificant 0.05073585 4.9469e-01 insignificant 1.0000000 insignificant 0.66191 0.71744 -0.0463651 8 0.66732 0.73808 -0.0707593 7.4638e-01 0.0510044 insignificant 1.0000e+00 1.00000 insignificant 8.2997e-01 0.04467918 weaklyHypometh 1.000000 1.00000 insignificant -0.0775971 0.13326525 insignificant 1.00000 insignificant 0.75440 0.60121 0.1577809 8 0.78445 0.57165 0.2128017 2.3925e-03 0.9999667 weaklyHypermeth 8.9768e-02 1 weaklyHypermeth 1.1786e-02 0.99994451 weaklyHypermeth 7.8968e-01 1.00000 insignificant 0.1163070 1.2916e-01 insignificant 1.000000 insignificant 0.75316 0.71744 0.0438971 8 0.73655 0.73808 -0.0015295 8.2699e-02 0.785716 insignificant 1.0000e+00 1 insignificant 0.31020854 0.55295239 insignificant 1.000000 1.00000 insignificant -0.0120260 0.798874 insignificant 1 insignificant 0.60537 0.71744 -0.1079423 8 0.60979 0.73808 -0.128287 0.990008 2.3594e-02 weaklyHypometh 1 8.5120e-01 insignificant 0.97372 6.9330e-02 insignificant 1 1.0000e+00 insignificant -0.12833298 9.3125e-02 insignificant 1.000000 insignificant chrX 152449062 152450062 165417 ATP2B3 ENSG00000067842 0.88220 234 8 0.83784 106 9 0.76049 189 8 0.904321 102 5 0.628309 69 6 0.875775 150 6 0.7423040 158 9 0.77865 148 8 0.78769 141 8 0.77705 162 8 0.88466 246 9 0.78969 65 8 0.7639278 153 6 0.55952 23 1 0.7504209 100 6 0.79286 36 4 0.836094 125 6 0.73160 116 6 0.795437 221 8 0.74074 239 8 0.95500 68 5 0.734044 65 5 0.762603 103 9 0.66042 76 6 0.857516 86 5 0.84185 239 9 0.53119 142 5 0.54107 70 5 0.75972 208 8 0.934656 129 8 0.73516 250 9 0.92277 268 8 0.58820 117 9 0.52448 185 8 0.66667 83 4 0.76750 100 5 0.706030 69 5 0.45204 262 9 0.62389 392 9 0.80107 169 8 0.886599 195 6 0.76320 311 8 0.65389 106 7 0.85932 0.844027 0.63711 0.828662 0.691520 0.846285 0.816625 0.79251 0.69316 0.84907 0.82670 0.748703 0.7482846 NA 0.810815 0.92753 0.70630 0.79075 0.759434 0.66123 0.88841 0.676837 0.722115 0.76801 0.809406 0.83518 0.66801 0.81576 0.73253 0.874242 0.662579 0.87952 0.48202 0.34768 0.776165 0.59450 0.58910 0.25108 0.62450 0.770250 0.768605 0.76438 0.672682 5 0.78405 0.79695 -8.5615e-03 8 0.78650 0.73081 0.05569298 0.790870 0.0498969 weaklyHypometh 1 1 insignificant 0.648646 0.100706 insignificant 1 1 insignificant 0.01131207 0.80480 insignificant 1 insignificant 0.78417 0.44363 0.3606514 8 0.79982 0.55249 0.2473251 3.5819e-16 0.99998462 hypermethylated 1.1200e-13 1.00000 hypermethylated 5.3879e-04 0.99972768 hypermethylated 7.2197e-02 1.00000 hypermethylated 0.16349070 1.7218e-02 weaklyHypermeth 1.0000000 insignificant 0.78405 0.71697 0.0667681 6 0.78650 0.74276 0.0437413 1.0727e-02 0.8328375 weaklyHypermeth 1.0000e+00 1.00000 insignificant 1.9781e-01 0.76070129 insignificant 1.000000 1.00000 insignificant 0.0352484 0.52408774 insignificant 1.00000 insignificant 0.79742 0.44363 0.3532511 8 0.81201 0.55249 0.2595181 1.0966e-11 0.9999936 hypermethylated 3.4286e-09 1 hypermethylated 2.9371e-04 0.99884009 hypermethylated 5.5099e-02 1.00000 hypermethylated 0.1521786 3.3156e-02 weaklyHypermeth 1.000000 insignificant 0.79695 0.71697 0.0738400 6 0.73081 0.74276 -0.0119517 5.1235e-03 0.948249 weaklyHypermeth 9.7024e-01 1 insignificant 0.05082336 0.90193726 insignificant 1.000000 1.00000 insignificant 0.0239363 0.713131 insignificant 1 insignificant 0.44363 0.71709 -0.2851256 6 0.55249 0.75122 -0.198724 0.998449 2.9332e-05 hypomethylated 1 4.9621e-03 hypomethylated 0.99987 6.8562e-03 weaklyHypometh 1 6.4311e-01 insignificant -0.12824230 9.3004e-02 insignificant 1.000000 insignificant chrX 152683477 152684477 165421 PLXNB3 ENSG00000198753 0.86804 355 11 0.87136 147 14 0.79492 292 12 0.919506 196 10 0.864138 145 9 0.854288 203 11 0.8848110 278 15 0.89736 189 10 0.76493 198 9 0.86063 225 9 0.89399 405 15 0.75488 123 8 0.7349361 270 7 0.95857 38 2 0.7741261 150 9 0.79514 82 7 0.629038 100 5 0.64107 232 9 0.863568 297 14 0.89867 303 15 0.85699 112 8 0.717478 140 8 0.874894 180 10 0.88523 148 8 0.835131 415 14 0.82566 255 15 0.70253 203 11 0.73961 151 8 0.87939 273 15 0.734062 145 11 0.83023 324 15 0.94177 398 11 0.56169 131 9 0.58857 267 11 0.33594 374 9 0.76430 151 10 0.539872 140 9 0.51803 460 15 0.77711 390 12 0.74931 182 10 0.737371 268 8 0.84431 425 9 0.66761 173 10 0.90157 0.781693 0.83384 0.862895 0.943647 0.856409 0.878044 0.86979 0.83744 0.91268 0.87594 0.756375 0.7171973 0.86594 0.812032 0.83573 0.72709 0.77912 0.851309 0.87988 0.91192 0.704748 0.855275 0.82391 0.864385 0.84213 0.82192 0.81987 0.80809 0.835333 0.825303 0.91121 0.59394 0.65582 0.454709 0.72802 0.75235 0.57142 0.73493 0.750744 0.742331 0.76080 0.632398 3 0.85346 0.83631 7.5603e-03 11 0.86916 0.82083 0.04833068 0.684428 0.9618764 insignificant 1 1 insignificant 0.840054 0.971177 insignificant 1 1 insignificant 0.00761661 0.80006 insignificant 1 insignificant 0.85346 0.56776 0.2877012 11 0.86261 0.51148 0.3511307 6.2744e-29 1.00000000 hypermethylated 2.9427e-26 1.00000 hypermethylated 2.3803e-09 1.00000000 hypermethylated 1.1164e-06 1.00000 hypermethylated 0.27479669 3.2064e-03 weaklyHypermeth 0.6190508 insignificant 0.85328 0.73486 0.1106798 10 0.82827 0.78275 0.0455209 3.3773e-11 0.9655438 weaklyHypermeth 3.1679e-08 1.00000 weaklyHypermeth 2.9953e-05 0.97872454 weaklyHypermeth 0.028096 1.00000 weaklyHypermeth 0.0710558 0.07430111 insignificant 1.00000 insignificant 0.83619 0.56748 0.2928950 15 0.80197 0.48577 0.3161931 2.4778e-21 1.0000000 hypermethylated 1.1621e-18 1 hypermethylated 6.1791e-09 1.00000000 hypermethylated 2.8980e-06 1.00000 hypermethylated 0.2671801 3.5009e-03 weaklyHypermeth 0.656765 insignificant 0.83718 0.73486 0.1061205 10 0.83358 0.78275 0.0508369 4.0432e-08 0.893831 weaklyHypermeth 3.7925e-05 1 weaklyHypermeth 0.00008529 0.95487462 weaklyHypermeth 0.080003 1.00000 weaklyHypermeth 0.0634392 0.114260 insignificant 1 insignificant 0.56794 0.73486 -0.1640850 10 0.51435 0.78275 -0.268392 0.999970 3.3024e-07 weaklyHypometh 1 1.4147e-04 weaklyHypometh 0.99998 5.5720e-04 weaklyHypometh 1 2.6133e-01 insignificant -0.20374088 1.3520e-02 weaklyHypometh 1.000000 insignificant chrX 153232410 153233410 165426 TKTL1 ENSG00000007350 0.94269 485 7 0.95082 150 7 0.87013 232 8 0.970591 257 7 0.979465 147 7 0.961887 227 9 0.9499382 193 8 0.93382 212 8 0.90724 159 7 0.96659 228 7 0.67982 364 10 0.85714 27 2 0.9719089 328 7 0.89163 84 4 0.9838235 112 6 1.00000 9 0 0.718750 21 3 0.94312 403 7 0.991730 355 7 0.79218 483 7 0.99457 88 8 0.913771 82 3 0.924405 129 7 0.85072 128 6 0.974968 112 8 0.84680 343 10 0.68543 104 6 0.93704 124 8 0.78744 277 9 0.928387 181 10 0.62514 345 10 0.90508 450 8 0.95500 122 9 0.73688 390 9 0.82681 315 6 0.61849 41 3 0.613313 99 8 0.79555 416 10 0.87219 398 7 0.96277 200 7 0.849136 473 7 0.94486 573 7 0.96364 198 7 0.94040 0.899591 0.88839 0.968141 0.974751 0.942054 0.912767 0.90931 0.94400 0.92306 0.94675 0.834339 0.9548194 0.91697 0.971638 0.98245 0.91921 0.92147 0.991398 0.90232 0.97959 0.893433 0.967203 0.88302 0.951570 0.90091 0.84373 0.99139 0.84735 0.933938 0.917298 0.94695 0.96362 0.77438 0.896159 0.82402 0.86884 0.81740 0.89854 0.942760 0.944752 0.94313 0.934026 3 0.93716 0.91490 1.7944e-02 7 0.77587 0.63523 0.14064669 0.017308 0.9925492 weaklyHypermeth 1 1 insignificant 0.091516 0.995124 insignificant 1 1 insignificant 0.04868562 0.22028 insignificant 1 insignificant 0.93716 0.85973 0.0792209 7 0.77587 0.58460 0.1912748 1.2346e-06 0.99986893 weaklyHypermeth 1.0528e-04 1.00000 weaklyHypermeth 1.7147e-03 0.99841040 weaklyHypermeth 1.4622e-01 1.00000 insignificant 0.15549007 3.2023e-02 weaklyHypermeth 1.0000000 insignificant 0.93758 0.93105 0.0094925 7 0.91172 0.91682 -0.0051007 8.7006e-02 0.8088167 insignificant 1.0000e+00 1.00000 insignificant 2.9517e-01 0.93633059 insignificant 1.000000 1.00000 insignificant -0.0053535 0.86774125 insignificant 1.00000 insignificant 0.91490 0.85973 0.0648466 8 0.63523 0.58460 0.0506281 3.3666e-02 0.9859700 weaklyHypermeth 1.0000e+00 1 insignificant 1.0327e-01 0.99850137 insignificant 1.0000e+00 1.00000 insignificant 0.1068045 1.2325e-01 insignificant 1.000000 insignificant 0.91723 0.93102 -0.0063895 7 0.88932 0.90850 -0.0191828 5.5629e-01 0.394799 insignificant 1.0000e+00 1 insignificant 0.63872709 0.65585173 insignificant 1.000000 1.00000 insignificant -0.0540391 0.204979 insignificant 1 insignificant 0.86222 0.93102 -0.0685552 7 0.81844 0.90850 -0.090062 0.972928 3.5822e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.93414 7.5371e-02 insignificant 1 1.0000e+00 insignificant -0.16084358 2.9324e-02 weaklyHypometh 1.000000 insignificant chrX 153522522 153523522 165428 NCRNA00204B ENSG00000212744 0.53714 198 10 0.58291 155 10 0.59786 74 8 0.654750 173 10 0.589652 102 9 0.601864 159 10 0.5555556 108 7 0.56679 162 9 0.57590 88 9 0.53500 61 5 0.60768 208 9 0.59788 35 2 0.6432331 111 9 0.65352 71 6 0.6787879 85 9 0.62460 29 2 0.601046 202 5 0.67221 136 9 0.680131 90 7 0.64863 112 6 0.65833 28 4 0.648148 24 1 0.602596 123 10 0.73556 66 6 0.589259 62 6 0.64671 158 9 0.77844 74 6 0.44405 37 2 0.59671 125 10 0.607707 107 6 0.71529 121 8 0.65316 169 9 0.49344 143 9 0.49020 112 9 0.52580 182 10 0.54697 37 3 0.558417 103 9 0.61559 186 10 0.64891 197 10 0.70814 156 10 0.634638 192 11 0.62296 155 10 0.60267 168 10 0.66603 0.699517 0.76552 0.770841 0.770020 0.708511 0.700142 0.72466 0.68430 0.72506 0.69736 0.628432 0.7319508 0.75882 0.811767 0.80159 0.73775 0.77485 0.739396 0.73143 0.57129 0.776764 0.735919 0.88402 0.775081 0.72849 0.73524 0.65571 0.70243 0.738896 0.743023 0.76124 0.62159 0.54446 0.648984 0.69160 0.66291 0.64609 0.75868 0.794109 0.737121 0.71923 0.710133 1 0.70157 0.74748 -2.5751e-02 6 0.60980 0.59561 0.01419216 0.963793 0.0831563 insignificant 1 1 insignificant 0.865164 0.301617 insignificant 1 1 insignificant -0.02940508 0.28647 insignificant 1 insignificant 0.70174 0.64613 0.0851334 9 0.61978 0.54105 0.0787307 5.3891e-06 0.98484693 weaklyHypermeth 3.1594e-04 1.00000 weaklyHypermeth 2.6533e-03 0.99098887 weaklyHypermeth 1.9145e-01 1.00000 insignificant 0.07185574 1.0389e-02 weaklyHypermeth 0.8120509 insignificant 0.70174 0.72696 -0.0225072 9 0.61978 0.63682 -0.0170394 7.8382e-01 0.2708818 insignificant 1.0000e+00 1.00000 insignificant 6.4205e-01 0.66519084 insignificant 1.000000 1.00000 insignificant -0.0332034 0.15064194 insignificant 1.00000 insignificant 0.74817 0.64613 0.1146238 6 0.64975 0.54105 0.1087029 6.8380e-07 0.9944157 weaklyHypermeth 8.0176e-05 1 weaklyHypermeth 9.0903e-04 0.99812761 weaklyHypermeth 1.0658e-01 1.00000 insignificant 0.1012608 5.1009e-03 weaklyHypermeth 0.683514 insignificant 0.74817 0.72696 0.0102918 6 0.64975 0.63682 0.0129328 2.6258e-01 0.915034 insignificant 1.0000e+00 1 insignificant 0.19687234 0.98306892 insignificant 1.000000 1.00000 insignificant -0.0037983 0.902261 insignificant 1 insignificant 0.64613 0.72696 -0.1128955 10 0.54105 0.63682 -0.095770 0.992709 6.1176e-05 weaklyHypometh 1 7.1728e-03 weaklyHypometh 0.99725 4.4092e-03 weaklyHypometh 1 5.4249e-01 insignificant -0.10505914 3.0338e-03 weaklyHypometh 0.584390 insignificant chrX 153526828 153527828 165429 NCRNA00204B ENSG00000212744 0.91679 675 21 0.85822 294 15 0.80715 638 19 0.936559 311 22 0.854824 346 19 0.864947 445 21 0.8819320 696 22 0.77612 458 19 0.83947 522 19 0.89407 427 19 0.83137 623 26 0.82478 284 17 0.8370739 548 19 0.91009 89 3 0.8219966 321 19 0.84653 183 14 0.763213 481 14 0.86373 445 18 0.745091 525 19 0.79066 731 18 0.80385 74 3 0.782840 229 14 0.841676 301 19 0.88235 258 16 0.921652 428 15 0.91132 583 22 0.80753 359 18 0.84915 257 16 0.85570 479 19 0.839473 385 18 0.83566 660 25 0.88665 750 18 0.84700 313 20 0.79103 704 20 0.85148 592 22 0.84133 265 14 0.809449 213 17 0.84958 683 25 0.83178 756 21 0.78982 329 16 0.787779 572 21 0.83774 1057 18 0.89616 259 18 0.90388 0.852602 0.81777 0.913553 0.913046 0.833566 0.895778 0.83436 0.84179 0.86721 0.85329 0.827439 0.7907460 0.87584 0.815235 0.81023 0.81460 0.77963 0.808530 0.87170 0.81116 0.646900 0.858998 0.88362 0.890352 0.87300 0.82688 0.83855 0.83575 0.831615 0.807158 0.89715 0.89281 0.71737 0.763078 0.76401 0.87359 0.79102 0.80113 0.791753 0.776693 0.83302 0.842638 5 0.84790 0.86143 -1.3085e-03 18 0.80037 0.81444 -0.01406951 0.733912 0.6193627 insignificant 1 1 insignificant 0.831454 0.741922 insignificant 1 1 insignificant -0.00825677 0.62743 insignificant 1 insignificant 0.84790 0.80253 0.0678029 18 0.80037 0.79445 0.0059215 1.4242e-07 0.92015898 weaklyHypermeth 1.6699e-05 1.00000 weaklyHypermeth 1.2919e-01 0.75597101 insignificant 1.0000e+00 1.00000 insignificant 0.01158598 4.6112e-01 insignificant 1.0000000 insignificant 0.84852 0.83182 0.0286427 18 0.85426 0.82955 0.0247046 6.9664e-03 0.7319851 weaklyHypermeth 1.0000e+00 1.00000 insignificant 3.0236e-02 0.84351478 weaklyHypermeth 1.000000 1.00000 insignificant 0.0145755 0.54387403 insignificant 1.00000 insignificant 0.86143 0.80253 0.0672004 18 0.81444 0.79445 0.0199910 3.9660e-05 0.9815998 weaklyHypermeth 3.1001e-03 1 weaklyHypermeth 1.6420e-01 0.82914189 insignificant 1.0000e+00 1.00000 insignificant 0.0198427 2.3588e-01 insignificant 1.000000 insignificant 0.86207 0.83182 0.0296923 18 0.85072 0.82955 0.0211667 2.4262e-01 0.923230 insignificant 1.0000e+00 1 insignificant 0.29931558 0.90265616 insignificant 1.000000 1.00000 insignificant 0.0228322 0.358815 insignificant 1 insignificant 0.80267 0.83182 -0.0462502 18 0.80919 0.82955 -0.020362 0.641074 6.2932e-02 insignificant 1 1.0000e+00 insignificant 0.83553 7.0716e-01 insignificant 1 1.0000e+00 insignificant 0.00298948 8.9771e-01 insignificant 1.000000 insignificant chrX 153529167 153530167 165430 ENSG00000218293 0.97896 314 7 0.91498 149 10 0.88389 365 10 0.840000 120 5 0.874850 275 9 0.790338 214 5 0.8371595 545 9 0.92022 286 10 0.86279 324 10 0.90556 352 10 0.81113 451 10 0.88942 157 9 0.8516042 289 9 0.98182 61 5 0.7619872 223 9 0.82915 95 6 0.712162 156 5 0.69943 178 5 0.936744 490 10 0.89306 427 9 0.81781 80 8 0.972222 26 0 0.908375 126 9 0.83957 110 9 0.916667 24 2 0.90021 321 10 0.87002 214 10 0.74812 155 9 0.94496 383 9 0.823096 165 9 0.78361 248 10 0.86281 374 9 0.85416 181 10 0.74230 463 10 0.90212 344 9 1.00000 7 0 0.918704 116 9 0.82257 448 10 0.84418 503 8 0.92447 202 9 0.748591 285 5 0.88330 346 6 0.96788 156 5 0.97085 0.897350 0.94494 0.969585 0.948439 0.934069 0.932957 0.93154 0.92593 0.95032 0.92875 0.974501 0.9572655 0.97406 0.933875 0.93126 0.85337 0.90810 0.945797 0.93159 0.91323 0.987502 0.936285 0.85542 0.772321 0.93765 0.91254 0.92618 0.96700 0.943324 0.890989 0.92100 0.89908 0.84154 0.863677 0.95761 0.93443 0.83610 0.93329 0.941210 0.909389 0.96195 0.949243 2 0.91699 0.91015 6.8275e-03 9 0.66796 0.67076 -0.00279288 0.628840 0.9394510 insignificant 1 1 insignificant 0.873496 0.644826 insignificant 1 1 insignificant -0.00685847 0.79238 insignificant 1 insignificant 0.91781 0.84349 0.0695191 9 0.88515 0.83280 0.0523498 4.1123e-09 0.99883036 weaklyHypermeth 7.7146e-07 1.00000 weaklyHypermeth 7.4811e-03 0.90281108 weaklyHypermeth 3.8985e-01 1.00000 insignificant -0.01454659 7.2608e-01 insignificant 1.0000000 insignificant 0.91731 0.95107 -0.0027841 6 0.73762 0.73702 0.0006004 5.2929e-01 0.0788497 insignificant 1.0000e+00 1.00000 insignificant 9.2052e-01 0.22305822 insignificant 1.000000 1.00000 insignificant -0.0149207 0.73021994 insignificant 1.00000 insignificant 0.91175 0.84349 0.0608506 9 0.88906 0.83280 0.0562598 3.4217e-05 0.9931093 weaklyHypermeth 2.9178e-03 1 weaklyHypermeth 3.1356e-02 0.96275707 weaklyHypermeth 1.0000e+00 1.00000 insignificant -0.0076881 8.5549e-01 insignificant 1.000000 insignificant 0.91097 0.95107 -0.0129689 6 0.78255 0.73702 0.0455254 5.4470e-01 0.193874 insignificant 1.0000e+00 1 insignificant 0.75983910 0.39109607 insignificant 1.000000 1.00000 insignificant -0.0080622 0.854196 insignificant 1 insignificant 0.84349 0.95299 -0.0751052 6 0.83280 0.88443 -0.051629 0.994551 4.0591e-05 weaklyHypometh 1 5.4393e-03 weaklyHypometh 0.98158 1.6480e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.00037412 9.9442e-01 insignificant 1.000000 insignificant chrX 154230825 154231825 165446 ENSG00000217796 0.84799 138 5 0.87516 72 5 0.85244 122 5 1.000000 18 1 0.888889 46 5 1.000000 43 4 0.9169118 101 5 0.90667 66 5 0.95500 49 5 0.93812 91 5 0.88101 145 5 0.95000 27 3 0.9101002 108 5 NA 0 0 0.9454545 51 5 0.88571 42 5 0.921176 51 5 1.00000 27 3 0.980476 123 5 0.91464 106 5 0.93333 14 2 1.000000 6 0 0.907867 73 5 0.98333 39 4 1.000000 3 0 0.99091 67 5 0.82516 56 5 0.92667 38 4 0.88854 70 5 0.970833 52 5 0.86619 89 5 0.87662 137 5 0.97662 72 5 0.75693 73 5 0.89429 221 5 0.86667 12 0 0.905357 47 5 0.75503 132 5 0.90388 142 5 0.94017 56 5 0.919318 51 5 0.88320 104 5 1.00000 48 5 0.83247 0.862687 0.83398 1.000000 0.839869 1.000000 0.905331 0.86078 0.96360 0.93874 0.86864 0.974265 0.8988016 NA 0.935829 0.87185 0.89455 1.00000 0.979447 0.88950 0.94533 0.992393 0.908294 0.97304 0.952431 0.98529 0.77355 0.89902 0.88591 0.960172 0.853809 0.86681 0.97794 0.68672 0.895590 0.84314 0.91859 0.74813 0.88154 0.946770 0.928142 0.87152 1.000000 0 0.90252 0.90217 8.0286e-05 5 0.91154 0.90940 0.00214481 0.507272 0.5099586 insignificant 1 1 insignificant 0.765854 0.265677 insignificant 1 1 insignificant -0.00606340 0.76762 lowCoverage 1 lowCoverage 0.90252 0.83303 0.0691407 5 0.91154 0.84479 0.0667459 5.0201e-04 0.99227136 weaklyHypermeth 1.9620e-02 1.00000 weaklyHypermeth 6.4758e-02 0.99508772 insignificant 1.0000e+00 1.00000 insignificant 0.06557437 1.3100e-01 lowCoverage 1.0000000 lowCoverage 0.90252 0.91022 -0.0072402 5 0.91154 0.91934 -0.0078033 7.3430e-01 0.5366364 insignificant 1.0000e+00 1.00000 insignificant 4.8576e-01 0.77131303 insignificant 1.000000 1.00000 insignificant -0.0045900 0.84650657 lowCoverage 1.00000 lowCoverage 0.90217 0.83303 0.0673359 5 0.90940 0.84479 0.0646010 1.2927e-03 0.9372228 weaklyHypermeth 5.0522e-02 1 weaklyHypermeth 3.0505e-02 0.98153842 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.0716378 1.1188e-01 lowCoverage 1.000000 lowCoverage 0.90217 0.91022 -0.0084735 5 0.90940 0.91934 -0.0099481 5.8730e-01 0.463857 insignificant 1.0000e+00 1 insignificant 0.22296922 0.82046259 insignificant 1.000000 1.00000 insignificant 0.0014734 0.956327 lowCoverage 1 lowCoverage 0.83303 0.91022 -0.0758769 5 0.84479 0.91934 -0.074549 0.979536 2.5799e-02 weaklyHypometh 1 8.9628e-01 insignificant 0.97267 2.2276e-01 insignificant 1 1.0000e+00 insignificant -0.07016436 1.2724e-01 lowCoverage 1.000000 lowCoverage chrX 154375232 154376232 165454 ENSG00000196198 0.94286 144 5 0.96273 68 5 0.84730 96 5 1.000000 12 0 0.922949 72 5 0.971429 50 3 0.9361254 163 5 0.86099 76 5 0.94701 83 5 0.82756 73 5 0.90324 142 5 0.95111 46 5 0.8217114 94 5 NA 0 0 0.9833333 64 5 0.85042 50 5 0.876162 107 5 0.73810 22 3 0.985103 92 5 0.84526 119 5 0.94444 19 3 1.000000 12 0 0.887669 80 5 0.89583 51 5 NA 0 0 0.90863 81 5 0.88784 42 5 0.98667 47 5 0.90333 39 3 0.968429 70 5 0.86400 111 5 0.96369 192 5 0.94790 53 5 0.85425 100 5 0.90702 229 5 0.66667 18 1 0.980000 31 5 0.87494 116 5 0.88999 142 5 1.00000 59 5 0.851342 64 5 0.94125 90 5 1.00000 16 1 0.93697 0.962368 0.83184 1.000000 0.892854 0.976891 0.933766 0.83557 0.93263 0.79968 0.90143 0.931046 0.8059220 NA 0.987745 0.84849 0.88818 0.80287 0.980933 0.83773 0.92086 1.000000 0.895399 0.84865 NA 0.88623 0.87128 0.97451 0.88186 0.966556 0.863912 0.95812 0.93401 0.80451 0.895769 0.71569 0.96176 0.87089 0.88606 1.000000 0.820525 0.91624 1.000000 1 0.89765 0.91801 -2.0046e-02 5 0.90454 0.92549 -0.02094792 0.916742 0.1646018 insignificant 1 1 insignificant 0.895389 0.325207 insignificant 1 1 insignificant -0.02436802 0.26244 lowCoverage 1 lowCoverage 0.89765 0.87203 0.0261862 5 0.90454 0.88151 0.0230274 7.2298e-02 0.38373527 insignificant 1.0000e+00 1.00000 insignificant 5.3560e-01 0.27584497 insignificant 1.0000e+00 1.00000 insignificant 0.03206735 5.2724e-01 lowCoverage 1.0000000 lowCoverage 0.89765 0.90836 -0.0091781 5 0.90454 0.91729 -0.0127473 8.5201e-01 0.4854607 insignificant 1.0000e+00 1.00000 insignificant 9.2947e-01 0.36980659 insignificant 1.000000 1.00000 insignificant -0.0326541 0.36678643 lowCoverage 1.00000 lowCoverage 0.91801 0.87203 0.0441291 5 0.92549 0.88151 0.0439753 2.7801e-02 0.5424272 weaklyHypermeth 8.9923e-01 1 insignificant 4.8901e-01 0.46896395 insignificant 1.0000e+00 1.00000 insignificant 0.0564354 2.7744e-01 lowCoverage 1.000000 lowCoverage 0.91801 0.90836 0.0098171 5 0.92549 0.91729 0.0082006 4.7370e-01 0.821371 insignificant 1.0000e+00 1 insignificant 0.77889544 0.64368420 insignificant 1.000000 1.00000 insignificant -0.0082861 0.808486 lowCoverage 1 lowCoverage 0.87203 0.90836 -0.0358269 5 0.88151 0.91729 -0.035775 0.423473 2.6165e-01 insignificant 1 1.0000e+00 insignificant 0.62011 5.8210e-01 insignificant 1 1.0000e+00 insignificant -0.06472144 2.6357e-01 lowCoverage 1.000000 lowCoverage chrX 154904418 154905418 165478 WASH6P ENSG00000182484 0.90172 373 7 0.88873 567 8 0.90073 261 8 0.923053 207 8 0.946293 260 8 0.935366 536 8 0.8832554 238 8 0.90167 439 8 0.84505 257 8 0.88937 241 8 0.93876 670 8 0.89074 75 5 0.9560176 505 8 0.90506 293 8 0.9229755 352 7 0.83611 53 7 0.833333 4 0 0.92067 343 7 0.936879 880 8 0.96338 362 8 0.88862 198 8 0.929807 241 8 0.897214 290 8 0.91246 180 8 0.936174 220 7 0.96098 666 8 0.91052 461 8 0.82425 134 7 0.92697 566 7 0.936156 636 8 0.95424 624 8 0.91705 450 8 0.94525 325 8 0.94867 303 8 0.92778 448 8 0.77891 34 4 0.906029 224 8 0.93465 627 8 0.94913 366 8 0.93744 290 8 0.952887 257 7 0.92471 174 7 0.94264 277 8 0.93008 0.889454 0.90391 0.923696 0.943969 0.931713 0.903180 0.92700 0.85738 0.90451 0.94170 0.870364 0.9540849 0.92352 0.916645 0.80391 0.88646 0.91650 0.935221 0.95770 0.90545 0.928712 0.921515 0.90521 0.926477 0.96091 0.90971 0.80876 0.93649 0.937957 0.951828 0.93013 0.97169 0.95389 0.941499 0.82310 0.91621 0.94099 0.94880 0.939748 0.947530 0.93758 0.959398 7 0.92163 0.92970 -7.6102e-03 8 0.92667 0.93559 -0.00892435 0.932819 0.1067844 insignificant 1 1 insignificant 0.673951 0.592476 insignificant 1 1 insignificant -0.01024376 0.44855 insignificant 1 insignificant 0.92161 0.93626 -0.0118711 8 0.91750 0.92446 -0.0069594 7.1741e-01 0.06531569 insignificant 1.0000e+00 1.00000 insignificant 9.4276e-01 0.01645271 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.00092249 9.7443e-01 insignificant 1.0000000 insignificant 0.92163 0.94355 -0.0232564 8 0.92667 0.94650 -0.0198360 9.9812e-01 0.0027530 weaklyHypometh 1.0000e+00 0.86077 insignificant 9.9483e-01 0.00181613 weaklyHypometh 1.000000 0.56784 insignificant -0.0354024 0.00140106 weaklyHypometh 0.43806 insignificant 0.92969 0.93626 -0.0033773 8 0.92754 0.92446 0.0030805 4.3937e-01 0.2329352 insignificant 1.0000e+00 1 insignificant 9.7007e-01 0.02930209 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.0093213 7.5207e-01 insignificant 1.000000 insignificant 0.92970 0.94355 -0.0144864 8 0.93559 0.94650 -0.0109116 8.4185e-01 0.062843 insignificant 1.0000e+00 1 insignificant 0.99019612 0.00446233 weaklyHypometh 1.000000 1.00000 insignificant -0.0251587 0.045162 weaklyHypometh 1 insignificant 0.93626 0.94351 -0.0135144 8 0.92446 0.93981 -0.015356 0.782540 2.4053e-01 insignificant 1 1.0000e+00 insignificant 0.57657 4.2730e-01 insignificant 1 1.0000e+00 insignificant -0.03447996 2.5098e-01 insignificant 1.000000 insignificant chrX 154904825 154905825 165479 WASH6P ENSG00000182484 0.90172 373 7 0.88873 567 8 0.90073 261 8 0.923053 207 8 0.946293 260 8 0.935366 536 8 0.8832554 238 8 0.90167 439 8 0.84505 257 8 0.88937 241 8 0.93876 670 8 0.89074 75 5 0.9560176 505 8 0.90506 293 8 0.9229755 352 7 0.83611 53 7 0.833333 4 0 0.92067 343 7 0.936879 880 8 0.96338 362 8 0.88862 198 8 0.929807 241 8 0.897214 290 8 0.91246 180 8 0.936174 220 7 0.96098 666 8 0.91052 461 8 0.82425 134 7 0.92697 566 7 0.936156 636 8 0.95424 624 8 0.91705 450 8 0.94525 325 8 0.94867 303 8 0.92778 448 8 0.77891 34 4 0.906029 224 8 0.93465 627 8 0.94913 366 8 0.93744 290 8 0.952887 257 7 0.92471 174 7 0.94264 277 8 0.93008 0.889454 0.90391 0.923696 0.943969 0.931713 0.903180 0.92700 0.85738 0.90451 0.94170 0.870364 0.9540849 0.92352 0.916645 0.80391 0.88646 0.91650 0.935221 0.95770 0.90545 0.928712 0.921515 0.90521 0.926477 0.96091 0.90971 0.80876 0.93649 0.937957 0.951828 0.93013 0.97169 0.95389 0.941499 0.82310 0.91621 0.94099 0.94880 0.939748 0.947530 0.93758 0.959398 7 0.92163 0.92970 -7.6102e-03 8 0.92667 0.93559 -0.00892435 0.932819 0.1067844 insignificant 1 1 insignificant 0.673951 0.592476 insignificant 1 1 insignificant -0.01024376 0.44855 insignificant 1 insignificant 0.92161 0.93626 -0.0118711 8 0.91750 0.92446 -0.0069594 7.1741e-01 0.06531569 insignificant 1.0000e+00 1.00000 insignificant 9.4276e-01 0.01645271 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.00092249 9.7443e-01 insignificant 1.0000000 insignificant 0.92163 0.94355 -0.0232564 8 0.92667 0.94650 -0.0198360 9.9812e-01 0.0027530 weaklyHypometh 1.0000e+00 0.86077 insignificant 9.9483e-01 0.00181613 weaklyHypometh 1.000000 0.56784 insignificant -0.0354024 0.00140106 weaklyHypometh 0.43806 insignificant 0.92969 0.93626 -0.0033773 8 0.92754 0.92446 0.0030805 4.3937e-01 0.2329352 insignificant 1.0000e+00 1 insignificant 9.7007e-01 0.02930209 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.0093213 7.5207e-01 insignificant 1.000000 insignificant 0.92970 0.94355 -0.0144864 8 0.93559 0.94650 -0.0109116 8.4185e-01 0.062843 insignificant 1.0000e+00 1 insignificant 0.99019612 0.00446233 weaklyHypometh 1.000000 1.00000 insignificant -0.0251587 0.045162 weaklyHypometh 1 insignificant 0.93626 0.94351 -0.0135144 8 0.92446 0.93981 -0.015356 0.782540 2.4053e-01 insignificant 1 1.0000e+00 insignificant 0.57657 4.2730e-01 insignificant 1 1.0000e+00 insignificant -0.03447996 2.5098e-01 insignificant 1.000000 insignificant chrX 154905128 154906128 165480 WASH6P ENSG00000182484 0.92160 445 11 0.85320 556 9 0.79490 278 9 0.921525 248 9 0.912730 269 9 0.935285 665 9 0.8969552 244 9 0.92031 487 9 0.88449 277 9 0.91024 265 9 0.93057 704 9 0.84333 86 6 0.9547317 534 9 0.91561 304 9 0.9107004 373 9 0.78990 56 7 0.900000 7 0 0.91641 401 9 0.915133 912 11 0.86254 481 9 0.87228 230 11 0.909268 336 11 0.921315 373 11 0.86745 201 9 0.924137 252 9 0.95076 675 9 0.90750 517 9 0.67176 149 8 0.91921 583 9 0.935313 670 9 0.92748 630 9 0.93886 539 9 0.90804 407 11 0.83986 352 11 0.89459 426 8 0.76878 42 5 0.911639 239 9 0.91499 646 9 0.94089 400 11 0.95828 306 9 0.945776 277 8 0.92995 210 9 0.96086 328 9 0.93551 0.875041 0.89747 0.920961 0.935111 0.933265 0.903826 0.92819 0.86854 0.90566 0.93830 0.857238 0.9550346 0.92539 0.915918 0.81468 0.89404 0.91776 0.928874 0.95379 0.90001 0.931279 0.922272 0.89322 0.924493 0.95882 0.90738 0.80381 0.93594 0.938789 0.943311 0.93220 0.96686 0.94757 0.932715 0.81604 0.91958 0.93473 0.94674 0.944443 0.947268 0.93944 0.962703 8 0.92018 0.92473 -4.8083e-03 9 0.91254 0.92035 -0.00780760 0.871842 0.3128753 insignificant 1 1 insignificant 0.671122 0.765434 insignificant 1 1 insignificant -0.00093602 0.96902 insignificant 1 insignificant 0.92016 0.92282 -0.0064657 9 0.90459 0.87306 0.0315272 2.6914e-01 0.21317478 insignificant 1.0000e+00 1.00000 insignificant 5.2735e-01 0.07842352 insignificant 1.0000e+00 1.00000 insignificant 0.02152375 4.3102e-01 insignificant 1.0000000 insignificant 0.92018 0.94214 -0.0236080 9 0.91254 0.95064 -0.0380977 9.9974e-01 0.0011494 weaklyHypometh 1.0000e+00 0.86077 insignificant 9.9982e-01 0.00063671 weaklyHypometh 1.000000 0.56784 insignificant -0.0526426 0.00013467 weaklyHypometh 0.12632 insignificant 0.92472 0.92282 0.0013469 9 0.91310 0.87306 0.0400446 2.6565e-01 0.3714318 insignificant 1.0000e+00 1 insignificant 7.2883e-01 0.09579935 insignificant 1.0000e+00 1.00000 insignificant 0.0224598 4.9627e-01 insignificant 1.000000 insignificant 0.92473 0.94214 -0.0175778 9 0.92035 0.95064 -0.0302901 9.9421e-01 0.021022 weaklyHypometh 1.0000e+00 1 insignificant 0.99994117 0.00083638 weaklyHypometh 1.000000 0.78453 insignificant -0.0517066 0.038125 weaklyHypometh 1 insignificant 0.92282 0.94211 -0.0219405 9 0.87306 0.94615 -0.073088 0.941247 2.3491e-02 weaklyHypometh 1 8.5120e-01 insignificant 0.85922 6.4927e-02 insignificant 1 1.0000e+00 insignificant -0.07416636 2.5123e-02 weaklyHypometh 1.000000 insignificant chrX 154906576 154907576 165482 WASH6P ENSG00000182484 0.88850 690 10 0.78414 679 10 0.84289 690 10 0.891654 288 10 0.835050 557 10 0.921304 664 10 0.8360318 703 10 0.87277 774 10 0.87817 509 10 0.90042 772 10 0.90861 857 10 0.84861 469 10 0.9170576 675 10 0.85330 317 9 0.9331588 646 10 0.75450 429 10 0.952779 178 3 0.89955 601 10 0.867206 917 10 0.90371 504 10 0.92721 337 10 0.874634 464 10 0.827334 421 10 0.94629 374 10 0.941321 389 10 0.91565 752 10 0.84647 603 10 0.90547 250 10 0.85057 586 10 0.932696 705 10 0.86830 451 10 0.92506 362 10 0.81492 805 10 0.78900 826 10 0.82565 535 10 0.85092 84 8 0.806970 341 10 0.85825 457 10 0.88129 636 10 0.89662 407 10 0.875118 499 10 0.91694 823 7 0.84896 416 10 0.90205 0.818849 0.86337 0.889709 0.904349 0.899196 0.851692 0.86956 0.88942 0.91058 0.90860 0.893956 0.9176646 0.89210 0.925572 0.80283 0.92542 0.89495 0.911799 0.89062 0.92248 0.832232 0.907266 0.92246 0.928922 0.91757 0.84243 0.88942 0.89109 0.905839 0.910883 0.89391 0.85053 0.81269 0.849592 0.83849 0.84605 0.90394 0.90817 0.917716 0.898117 0.92590 0.897104 10 0.88908 0.90408 -1.5246e-02 10 0.88258 0.89994 -0.01735438 0.977172 0.0024538 weaklyHypometh 1 1 insignificant 0.984943 0.020573 weaklyHypometh 1 1 insignificant -0.02227949 0.17889 insignificant 1 insignificant 0.88908 0.82808 0.0583893 10 0.88258 0.81630 0.0662832 4.8350e-07 0.81683214 weaklyHypermeth 5.0391e-05 1.00000 weaklyHypermeth 5.9522e-03 0.68196869 weaklyHypermeth 3.2842e-01 1.00000 insignificant 0.05018481 4.8029e-03 weaklyHypermeth 0.6190508 insignificant 0.88908 0.89169 -0.0122906 10 0.88258 0.87772 0.0048624 3.6046e-01 0.0042012 weaklyHypometh 1.0000e+00 0.98519 insignificant 4.1150e-01 0.00282027 weaklyHypometh 1.000000 0.66135 insignificant -0.0093148 0.56368362 insignificant 1.00000 insignificant 0.90408 0.82808 0.0696455 10 0.89994 0.81630 0.0836376 4.3544e-06 0.9585012 weaklyHypermeth 4.0844e-04 1 weaklyHypermeth 3.6231e-03 0.78021007 weaklyHypermeth 3.0895e-01 1.00000 insignificant 0.0724643 4.3636e-04 weaklyHypermeth 0.136436 insignificant 0.90397 0.89177 -0.0075397 10 0.88631 0.88884 -0.0025302 1.0722e-01 0.140258 insignificant 1.0000e+00 1 insignificant 0.41103646 0.04436867 weaklyHypometh 1.000000 1.00000 insignificant 0.0129647 0.444549 insignificant 1 insignificant 0.82808 0.89169 -0.0696747 10 0.81630 0.87772 -0.061421 0.972448 1.4458e-03 weaklyHypometh 1 7.9773e-02 weaklyHypometh 0.99337 4.8425e-03 weaklyHypometh 1 5.4249e-01 insignificant -0.05949957 4.3765e-03 weaklyHypometh 0.584390 insignificant chrY 4695956 4696956 165526 ENSG00000206988 0.74021 145 5 0.92201 89 5 0.72892 70 5 0.827500 63 5 0.817762 58 5 0.760859 105 5 0.7921212 74 5 0.74541 71 5 0.81923 50 4 0.74675 63 5 0.81583 108 5 0.75278 44 5 0.7498990 79 5 NA 0 0 0.8614011 71 5 0.73260 48 5 0.876239 47 5 0.78543 98 5 0.746667 72 5 0.83828 141 5 0.75000 27 3 0.733333 23 3 0.709242 95 5 0.89056 32 3 0.860000 20 3 0.84178 84 5 0.83896 75 5 0.60000 11 0 0.81667 35 3 0.745035 98 5 0.87763 113 5 0.77618 179 5 0.70736 87 5 0.73152 58 5 0.86333 54 5 0.85231 59 5 0.688889 33 3 0.75155 105 5 0.82243 155 5 0.81486 164 5 0.809138 105 5 0.84885 159 5 0.71978 109 5 0.75618 0.911122 0.79052 0.868796 0.788091 0.813694 0.790069 0.75690 0.85607 0.70675 0.80177 0.681062 0.7974784 NA 0.854461 0.76081 0.91846 0.82219 0.772019 0.80810 0.85219 0.636253 0.728771 0.84901 0.912409 0.81253 0.84927 0.65450 0.85341 0.766191 0.848234 0.77475 0.71352 0.72760 0.829075 0.83015 0.72425 0.74463 0.83881 0.814335 0.808193 0.84296 0.717543 3 0.79612 0.79924 4.4962e-03 5 0.79122 0.79065 0.00057248 0.635055 0.7153733 insignificant 1 1 insignificant 0.609204 0.295031 insignificant 1 1 insignificant 0.00601104 0.82905 lowCoverage 1 lowCoverage 0.79612 0.77273 0.0303989 5 0.79122 0.77112 0.0201073 1.2573e-01 0.59589363 insignificant 1.0000e+00 1.00000 insignificant 2.6773e-01 0.38958231 insignificant 1.0000e+00 1.00000 insignificant 0.02680072 4.4312e-01 lowCoverage 1.0000000 lowCoverage 0.79612 0.80780 -0.0150141 5 0.79122 0.80857 -0.0173455 5.4841e-01 0.2537880 insignificant 1.0000e+00 1.00000 insignificant 4.7700e-01 0.41543542 insignificant 1.000000 1.00000 insignificant -0.0103859 0.69374309 lowCoverage 1.00000 lowCoverage 0.79924 0.77273 0.0272964 5 0.79065 0.77112 0.0195348 1.7119e-01 0.7058775 insignificant 1.0000e+00 1 insignificant 1.3340e-01 0.47170336 insignificant 1.0000e+00 1.00000 insignificant 0.0207897 6.0350e-01 lowCoverage 1.000000 lowCoverage 0.79924 0.80780 -0.0143384 5 0.79065 0.80857 -0.0179180 8.3075e-01 0.240187 insignificant 1.0000e+00 1 insignificant 0.47428404 0.49457276 insignificant 1.000000 1.00000 insignificant -0.0163970 0.624667 lowCoverage 1 lowCoverage 0.77273 0.80780 -0.0414300 5 0.77112 0.80857 -0.037453 0.730452 1.2722e-01 insignificant 1 1.0000e+00 insignificant 0.34540 3.2396e-01 insignificant 1 1.0000e+00 insignificant -0.03718666 3.4779e-01 lowCoverage 1.000000 lowCoverage chrY 4746369 4747369 165531 ENSG00000217045 0.77953 245 6 0.62778 43 6 0.56039 82 5 0.807375 209 6 NA 0 0 0.741088 180 6 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.80159 205 6 NA 0 0 0.78405 141 6 NA 0 0 NA 0 0 0.695670 85 5 NA 0 0 NA 0 0 0.75204 60 5 NA 0 0 NA 0 0 NA 0 0 0.751573 57 6 0.85119 39 5 0.79621 219 6 0.76659 68 6 NA 0 0 0.65546 82 6 NA 0 0 NA 0 0 0.70309 87 5 0.79152 234 6 0.80954 238 6 0.786602 170 6 0.78551 247 6 0.79956 234 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.73303 0.72609 4.3581e-03 5 0.76347 0.76359 -0.00012465 0.648831 0.6395526 insignificant 1 1 insignificant 0.863515 0.240618 insignificant 1 1 insignificant -0.04050634 0.38697 lowCoverage 1 lowCoverage 0.73303 0.68354 0.0511371 5 0.76347 0.66602 0.0974479 1.5222e-02 0.82642413 weaklyHypermeth 4.6059e-01 1.00000 insignificant 4.2262e-01 0.60352944 insignificant 1.0000e+00 1.00000 insignificant 0.02044740 6.8726e-01 lowCoverage 1.0000000 lowCoverage 0.73303 0.76848 -0.0338113 5 0.76347 0.79403 -0.0305599 9.8440e-01 0.0796499 insignificant 1.0000e+00 1.00000 insignificant 9.9840e-01 0.06469632 insignificant 1.000000 1.00000 insignificant -0.0657192 0.12234361 lowCoverage 1.00000 lowCoverage 0.72609 0.68354 0.0306459 5 0.76359 0.66602 0.0975725 4.9582e-02 0.7477556 weaklyHypermeth 1.0000e+00 1 insignificant 4.2933e-01 0.94812071 insignificant 1.0000e+00 1.00000 insignificant 0.0609537 2.0677e-01 lowCoverage 1.000000 lowCoverage 0.72609 0.76848 -0.0397569 5 0.76359 0.79403 -0.0304352 9.5571e-01 0.047065 weaklyHypometh 1.0000e+00 1 insignificant 0.73771221 0.19284279 insignificant 1.000000 1.00000 insignificant -0.0252128 0.389670 lowCoverage 1 lowCoverage 0.68354 0.76848 -0.0847614 5 0.66602 0.79403 -0.128008 0.936834 2.1227e-03 weaklyHypometh 1 1.1061e-01 insignificant 0.93617 6.1686e-02 insignificant 1 1.0000e+00 insignificant -0.08616658 1.1310e-01 lowCoverage 1.000000 lowCoverage chrY 8145699 8146699 165641 ENSG00000220258 0.74615 75 5 0.59883 93 5 0.52265 35 5 0.698333 81 5 0.851190 24 1 0.694109 116 5 0.5666667 38 5 0.68542 91 5 0.84792 30 2 0.43750 25 1 0.73724 153 5 0.57143 9 1 0.7709091 53 5 0.78182 26 1 0.7250000 45 5 0.72667 15 1 0.625000 16 0 0.77517 85 5 0.692381 60 5 0.69681 78 5 0.67000 18 1 0.682143 32 4 0.890023 52 5 0.77063 40 5 0.583333 12 1 0.72143 80 5 0.47943 52 4 0.41667 11 1 0.66786 53 5 0.662296 105 5 0.61890 82 5 0.74396 98 4 0.58132 38 5 0.63167 47 5 0.44333 84 5 0.40000 11 0 0.515000 34 3 0.69308 81 5 0.67294 77 5 0.72617 104 5 0.796491 87 5 0.46364 27 1 0.80357 110 5 0.75084 0.528855 0.47540 0.710197 0.821429 0.715799 0.589912 0.72641 0.77741 0.37664 0.70559 0.619255 0.8001196 0.77273 0.731673 0.73026 0.65241 0.71250 0.706767 0.74799 0.65461 0.669408 0.834482 0.78441 0.531608 0.71570 0.46968 0.53293 0.66424 0.661654 0.650201 0.69594 0.59427 0.61458 0.490570 0.33553 0.51151 0.63154 0.69892 0.738218 0.823869 0.52243 0.766291 0 0.69056 0.68189 8.9683e-03 5 0.77289 0.76792 0.00497168 0.643436 0.8757838 insignificant 1 1 insignificant 0.508122 0.868532 insignificant 1 1 insignificant 0.02867004 0.51796 lowCoverage 1 lowCoverage 0.69002 0.56949 0.1280526 5 0.73503 0.62594 0.1090945 1.3088e-03 0.99999964 weaklyHypermeth 4.7217e-02 1.00000 weaklyHypermeth 5.0655e-03 0.99989555 weaklyHypermeth 2.9697e-01 1.00000 insignificant 0.14349341 2.4237e-02 lowCoverage 1.0000000 lowCoverage 0.68811 0.74321 -0.0589178 5 0.68204 0.74327 -0.0612266 9.5771e-01 0.0669883 insignificant 1.0000e+00 1.00000 insignificant 7.8580e-01 0.27537824 insignificant 1.000000 1.00000 insignificant -0.0050025 0.94279338 lowCoverage 1.00000 lowCoverage 0.68139 0.56949 0.1179239 5 0.72923 0.62594 0.1032942 7.7223e-04 0.9999943 weaklyHypermeth 3.2925e-02 1 weaklyHypermeth 1.4802e-02 0.99985647 weaklyHypermeth 8.5914e-01 1.00000 insignificant 0.1148234 7.5197e-02 lowCoverage 1.000000 lowCoverage 0.67987 0.74321 -0.0682776 5 0.67508 0.74327 -0.0681869 9.9263e-01 0.031687 weaklyHypometh 1.0000e+00 1 insignificant 0.97686698 0.10505930 insignificant 1.000000 1.00000 insignificant -0.0336726 0.654386 lowCoverage 1 lowCoverage 0.56803 0.74321 -0.1848531 5 0.55113 0.74327 -0.192140 0.999961 3.1741e-05 weaklyHypometh 1 4.9621e-03 weaklyHypometh 0.99742 3.8418e-03 weaklyHypometh 1 5.4249e-01 insignificant -0.14849595 9.1804e-02 lowCoverage 1.000000 lowCoverage chrY 24743652 24744652 165845 CSPG4P2 ENSG00000172342 0.78571 46 3 0.85142 141 5 0.91585 75 3 0.767569 165 5 0.968899 166 4 0.760155 230 6 0.9193452 132 4 0.93750 87 4 0.77513 136 4 0.73786 130 4 0.95394 263 4 0.75903 165 5 0.7695570 181 4 NA 0 0 0.7851668 261 6 0.76786 157 5 0.942382 145 4 0.71839 208 5 0.752996 272 4 0.74565 136 4 0.87573 199 6 0.714074 73 5 0.771700 211 6 0.74212 93 4 1.000000 14 1 0.76785 72 3 0.93068 69 3 0.91599 97 4 0.95962 94 4 0.732180 199 5 0.45312 30 2 0.96726 74 4 0.68194 148 6 0.95375 155 4 0.80000 76 4 1.00000 38 2 0.822949 195 5 0.90000 16 1 0.59474 53 2 0.71543 276 6 0.588889 30 2 0.72157 82 4 0.70178 226 5 0.97283 0.879790 0.90768 0.944739 0.960048 0.903005 0.934524 0.98641 0.92528 0.91418 0.95334 0.923057 0.9579725 NA 0.901095 0.85839 0.93924 0.85960 0.933390 0.95870 0.95116 0.865645 0.857992 0.94009 1.000000 0.94743 0.92107 0.91258 0.93282 0.885990 0.852170 0.95173 0.82686 0.93911 1.000000 1.00000 0.85393 1.00000 0.98277 0.796564 0.972605 0.90708 0.855041 2 0.91602 0.87755 2.3345e-02 5 0.79031 0.79961 -0.00929910 0.117069 0.4335832 insignificant 1 1 insignificant 0.777865 0.642185 insignificant 1 1 insignificant 0.00261747 0.95797 lowCoverage 1 lowCoverage 0.91602 0.90446 0.0068584 5 0.79031 0.74958 0.0407281 8.9034e-02 0.14344104 insignificant 1.0000e+00 1.00000 insignificant 8.8595e-01 0.03170357 inconclusive 1.0000e+00 1.00000 insignificant -0.03796378 4.8272e-01 lowCoverage 1.0000000 lowCoverage 0.91602 0.83508 0.0542988 5 0.79031 0.73761 0.0527055 1.7676e-05 0.7526245 weaklyHypermeth 8.2898e-03 1.00000 weaklyHypermeth 3.0315e-01 0.68245813 insignificant 1.000000 1.00000 insignificant 0.1573314 0.00233507 lowCoverage 0.54758 lowCoverage 0.87755 0.90446 -0.0178735 5 0.79961 0.74958 0.0500272 2.7881e-01 0.0718907 insignificant 1.0000e+00 1 insignificant 8.4830e-01 0.09291455 insignificant 1.0000e+00 1.00000 insignificant -0.0405812 5.4251e-01 lowCoverage 1.000000 lowCoverage 0.87755 0.83508 0.0393853 5 0.79961 0.73761 0.0620046 5.1651e-03 0.720526 weaklyHypermeth 9.7024e-01 1 insignificant 0.31072619 0.71660723 insignificant 1.000000 1.00000 insignificant 0.1547139 0.011490 lowCoverage 1 lowCoverage 0.90446 0.83508 0.0650244 5 0.74958 0.73761 0.011977 0.022316 5.3733e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.36415 9.6005e-01 insignificant 1 1.0000e+00 insignificant 0.19529517 7.8130e-03 lowCoverage 0.814290 lowCoverage chrY 26036556 26037556 165875 ENSG00000221640 0.81481 42 4 0.81659 184 6 0.88772 83 3 0.744700 184 5 0.919720 182 4 0.695030 249 5 0.9648118 140 4 0.83090 81 4 0.75270 158 4 0.98188 175 4 0.91341 262 4 0.73757 176 5 0.9481473 164 4 NA 0 0 0.7541632 257 5 0.86151 155 4 0.724572 149 4 0.70117 236 6 0.752696 232 4 0.95223 115 4 0.91317 200 6 0.790913 63 4 0.818042 144 5 0.97882 70 3 1.000000 12 2 0.78974 76 3 0.93647 49 4 0.98729 119 2 0.91108 88 4 0.791974 220 6 0.73856 31 2 0.64739 84 3 0.62941 147 6 0.97308 121 4 1.00000 74 4 1.00000 38 2 0.702605 202 5 0.77778 26 2 0.89583 54 2 0.73276 216 6 0.657895 37 3 0.79630 98 4 0.75141 246 5 0.95850 0.897170 0.86818 0.935244 0.906625 0.863851 0.967582 0.89254 0.93129 0.99017 0.90199 0.887124 0.9530543 NA 0.921192 0.91031 0.91578 0.83851 0.946459 0.94659 0.96220 0.784482 0.863310 0.98237 0.985041 0.97206 0.91680 0.98162 0.88111 0.875271 0.927492 0.91638 0.77100 0.97644 1.000000 1.00000 0.82715 0.97858 0.91968 0.812611 0.980977 0.99331 0.895830 2 0.90757 0.89100 3.6627e-03 5 0.80137 0.83295 -0.03158126 0.345225 0.1012952 insignificant 1 1 insignificant 0.933374 0.167992 insignificant 1 1 insignificant -0.02944598 0.46059 lowCoverage 1 lowCoverage 0.90757 0.87007 0.0282184 5 0.80137 0.73754 0.0638298 5.0699e-02 0.39626129 insignificant 1.0000e+00 1.00000 insignificant 8.2981e-01 0.07976726 insignificant 1.0000e+00 1.00000 insignificant -0.01797023 8.0804e-01 lowCoverage 1.0000000 lowCoverage 0.90757 0.87711 0.0080085 5 0.80137 0.75758 0.0437856 8.3342e-02 0.5718008 insignificant 1.0000e+00 1.00000 insignificant 8.1165e-01 0.39684750 insignificant 1.000000 1.00000 insignificant 0.0623379 0.21039711 lowCoverage 1.00000 lowCoverage 0.89100 0.87007 0.0263209 5 0.83295 0.73754 0.0954110 4.9882e-02 0.6949690 weaklyHypermeth 1.0000e+00 1 insignificant 4.9288e-01 0.48897385 insignificant 1.0000e+00 1.00000 insignificant 0.0114758 8.8184e-01 lowCoverage 1.000000 lowCoverage 0.89100 0.87711 0.0108124 5 0.83295 0.75758 0.0753669 5.0330e-02 0.804287 insignificant 1.0000e+00 1 insignificant 0.28250831 0.84775015 insignificant 1.000000 1.00000 insignificant 0.0917838 0.101952 lowCoverage 1 lowCoverage 0.87007 0.87711 0.0017684 5 0.73754 0.75758 -0.020044 0.744042 6.9017e-01 insignificant 1 1.0000e+00 insignificant 0.64902 8.9377e-01 insignificant 1 1.0000e+00 insignificant 0.08030809 3.3308e-01 lowCoverage 1.000000 lowCoverage